Alzheimer TNR1A

Max NC = 43
Total NC = 1840/3620
NC X-axis shows number of BLAST hits for
each of the NC sequences along the Y-axis

Max CN = 46
Total CN = 1780/3620
CN X-axis shows number of BLAST hits for
each of the CN sequences along the Y-axis

Seq1 = 2 Seq2 = 11 Seq3 = 4 Seq4 = 14 Seq5 = 20 Seq6 = 15 Seq7 = 12 Seq8 = 21 Seq9 = 31 Seq10 = 23 Seq11 = 30 Seq12 = 32 Seq13 = 24 Seq14 = 34 Seq15 = 43 Seq16 = 28 Seq17 = 33 Seq18 = 21 Seq19 = 26 Seq20 = 22 Seq21 = 21 Seq22 = 9 Seq23 = 23 Seq24 = 20 Seq25 = 18 Seq26 = 25 Seq27 = 30 Seq28 = 22 Seq29 = 31 Seq30 = 32 Seq31 = 30 Seq32 = 19 Seq33 = 17 Seq34 = 22 Seq35 = 15 Seq36 = 23 Seq37 = 17 Seq38 = 19 Seq39 = 22 Seq40 = 15 Seq41 = 14 Seq42 = 16 Seq43 = 17 Seq44 = 14 Seq45 = 17 Seq46 = 8 Seq47 = 13 Seq48 = 20 Seq49 = 16 Seq50 = 24 Seq51 = 19 Seq52 = 18 Seq53 = 19 Seq54 = 27 Seq55 = 36 Seq56 = 26 Seq57 = 30 Seq58 = 28 Seq59 = 7 Seq60 = 22 Seq61 = 29 Seq62 = 16 Seq63 = 24 Seq64 = 33 Seq65 = 17 Seq66 = 23 Seq67 = 29 Seq68 = 27 Seq69 = 21 Seq70 = 21 Seq71 = 25 Seq72 = 11 Seq73 = 19 Seq74 = 24 Seq75 = 14 Seq76 = 8 Seq77 = 10 Seq78 = 13 Seq79 = 13 Seq80 = 6 Seq81 = 13 Seq82 = 17 Seq83 = 5 Seq84 = 11 Seq85 = 15 Seq86 = 18 Seq87 = 16 Seq88 = 21 Seq89 = 33 Seq90 = 41 SeqR1 = 4 SeqR2 = 7 SeqR3 = 5 SeqR4 = 9 SeqR5 = 20 SeqR6 = 16 SeqR7 = 21 SeqR8 = 24 SeqR9 = 24 SeqR10 = 27 SeqR11 = 19 SeqR12 = 25 SeqR13 = 26 SeqR14 = 33 SeqR15 = 37 SeqR16 = 32 SeqR17 = 34 SeqR18 = 19 SeqR19 = 23 SeqR20 = 28 SeqR21 = 20 SeqR22 = 12 SeqR23 = 17 SeqR24 = 20 SeqR25 = 19 SeqR26 = 24 SeqR27 = 21 SeqR28 = 27 SeqR29 = 30 SeqR30 = 18 SeqR31 = 23 SeqR32 = 15 SeqR33 = 16 SeqR34 = 19 SeqR35 = 25 SeqR36 = 28 SeqR37 = 21 SeqR38 = 19 SeqR39 = 20 SeqR40 = 16 SeqR41 = 12 SeqR42 = 13 SeqR43 = 8 SeqR44 = 12 SeqR45 = 15 SeqR46 = 7 SeqR47 = 15 SeqR48 = 8 SeqR49 = 10 SeqR50 = 20 SeqR51 = 19 SeqR52 = 14 SeqR53 = 14 SeqR54 = 26 SeqR55 = 26 SeqR56 = 30 SeqR57 = 24 SeqR58 = 27 SeqR59 = 13 SeqR60 = 26 SeqR61 = 26 SeqR62 = 17 SeqR63 = 36 SeqR64 = 46 SeqR65 = 25 SeqR66 = 18 SeqR67 = 29 SeqR68 = 22 SeqR69 = 19 SeqR70 = 22 SeqR71 = 21 SeqR72 = 12 SeqR73 = 19 SeqR74 = 28 SeqR75 = 15 SeqR76 = 18 SeqR77 = 19 SeqR78 = 14 SeqR79 = 16 SeqR80 = 6 SeqR81 = 12 SeqR82 = 10 SeqR83 = 8 SeqR84 = 8 SeqR85 = 11 SeqR86 = 15 SeqR87 = 22 SeqR88 = 20 SeqR89 = 33 SeqR90 = 31

1 MGLSTVPDLL 2
2 VPDLLLPLVL 11
3 LPLVLLELLV 4
4 LELLVGIYPS 14
5 GIYPSGVIGL 20
6 GVIGLVPHLG 15
7 VPHLGDREKR 12
8 DREKRDSVCP 21
9 DSVCPQGKYI 31
10 QGKYIHPQNN 23
11 HPQNNSICCT 30
12 SICCTKCHKG 32
13 KCHKGTYLYN 24
14 TYLYNDCPGP 34
15 DCPGPGQDTD 43
16 GQDTDCRECE 28
17 CRECESGSFT 33
18 SGSFTASENH 21
19 ASENHLRHCL 26
20 LRHCLSCSKC 22
21 SCSKCRKEMG 21
22 RKEMGQVEIS 9
23 QVEISSCTVD 23
24 SCTVDRDTVC 20
25 RDTVCGCRKN 18
26 GCRKNQYRHY 25
27 QYRHYWSENL 30
28 WSENLFQCFN 22
29 FQCFNCSLCL 31
30 CSLCLNGTVH 32
31 NGTVHLSCQE 30
32 LSCQEKQNTV 19
33 KQNTVCTCHA 17
34 CTCHAGFFLR 22
35 GFFLRENECV 15
36 ENECVSCSNC 23
37 SCSNCKKSLE 17
38 KKSLECTKLC 19
39 CTKLCLPQIE 22
40 LPQIENVKGT 15
41 NVKGTEDSGT 14
42 EDSGTTVLLP 16
43 TVLLPLVIFF 17
44 LVIFFGLCLL 14
45 GLCLLSLLFI 17
46 SLLFIGLMYR 8
47 GLMYRYQRWK 13
48 YQRWKSKLYS 20
49 SKLYSIVCGK 16
50 IVCGKSTPEK 24
51 STPEKEGELE 19
52 EGELEGTTTK 18
53 GTTTKPLAPN 19
54 PLAPNPSFSP 27
55 PSFSPTPGFT 36
56 TPGFTPTLGF 26
57 PTLGFSPVPS 30
58 SPVPSSTFTS 28
59 STFTSSSTYT 7
60 SSTYTPGDCP 22
61 PGDCPNFAAP 29
62 NFAAPRREVA 16
63 RREVAPPYQG 24
64 PPYQGADPIL 33
65 ADPILATALA 17
66 ATALASDPIP 23
67 SDPIPNPLQK 29
68 NPLQKWEDSA 27
69 WEDSAHKPQS 21
70 HKPQSLDTDD 21
71 LDTDDPATLY 25
72 PATLYAVVEN 11
73 AVVENVPPLR 19
74 VPPLRWKEFV 24
75 WKEFVRRLGL 14
76 RRLGLSDHEI 8
77 SDHEIDRLEL 10
78 DRLELQNGRC 13
79 QNGRCLREAQ 13
80 LREAQYSMLA 6
81 YSMLATWRRR 13
82 TWRRRTPRRE 17
83 TPRREATLEL 5
84 ATLELLGRVL 11
85 LGRVLRDMDL 15
86 RDMDLLGCLE 18
87 LGCLEDIEEA 16
88 DIEEALCGPA 21
89 LCGPAALPPAPSLLR 33
90 ALPPAPSLLR 41

1 LLDPVTSLGM 4
2 LVLPLLLDPV 7
3 VLLELLVLPL 5
4 SPYIGVLLEL 9
5 LGIVGSPYIG 20
6 GLHPVLGIVG 16
7 RKERDGLHPV 21
8 PCVSDRKERD 24
9 IYKGQPCVSD 24
10 NNQPHIYKGQ 27
11 TCCISNNQPH 19
12 GKHCKTCCIS 25
13 NYLYTGKHCK 26
14 PGPCDNYLYT 33
15 DTDQGPGPCD 37
16 ECERCDTDQG 32
17 TFSGSECERC 34
18 HNESATFSGS 19
19 LCHRLHNESA 23
20 CKSCSLCHRL 28
21 GMEKRCKSCS 20
22 SIEVQGMEKR 12
23 DVTCSSIEVQ 17
24 CVTDRDVTCS 20
25 NKRCGCVTDR 19
26 YHRYQNKRCG 24
27 LNESWYHRYQ 21
28 NFCQFLNESW 27
29 LCLSCNFCQF 30
30 HVTGNLCLSC 18
31 EQCSLHVTGN 23
32 VTNQKEQCSL 15
33 AHCTCVTNQK 16
34 RLFFGAHCTC 19
35 VCENERLFFG 25
36 CNSCSVCENE 28
37 ELSKKCNSCS 21
38 CLKTCELSKK 19
39 EIQPLCLKTC 20
40 TGKVNEIQPL 16
41 TGSDETGKVN 12
42 PLLVTTGSDE 13
43 FFIVLPLLVT 8
44 LLCLGFFIVL 12
45 IFLLSLLCLG 15
46 RYMLGIFLLS 7
47 KWRQYRYMLG 15
48 SYLKSKWRQY 8
49 KGCVISYLKS 10
50 KEPTSKGCVI 20
51 ELEGEKEPTS 19
52 KTTTGELEGE 14
53 NPALPKTTTG 14
54 PSFSPNPALP 26
55 TFGPTPSFSP 26
56 FGLTPTFGPT 30
57 SPVPSFGLTP 24
58 STFTSSPVPS 27
59 TYTSSSTFTS 13
60 PCDGPTYTSS 26
61 PAAFNPCDGP 26
62 AVERRPAAFN 17
63 GQYPPAVERR 36
64 LIPDAGQYPP 46
65 ALATALIPDA 25
66 PIPDSALATA 18
67 KQLPNPIPDS 29
68 ASDEWKQLPN 22
69 SQPKHASDEW 19
70 DDTDLSQPKH 22
71 YLTAPDDTDL 21
72 NEVVAYLTAP 12
73 RLPPVNEVVA 19
74 VFEKWRLPPV 28
75 LGLRRVFEKW 15
76 IEHDSLGLRR 18
77 LELRDIEHDS 19
78 CRGNQLELRD 14
79 QAERLCRGNQ 16
80 ALMSYQAERL 6
81 RRRWTALMSY 12
82 ERRPTRRRWT 10
83 LELTAERRPT 8
84 LVRGLLELTA 8
85 LDMDRLVRGL 11
86 ELCGLLDMDR 15
87 AEEIDELCGL 22
88 APGCLAEEID 20
89 RLLSPAPPLAAPGCL 33
90 RLLSPAPPLA 31