Human S39AE

Max NC = 54
Total NC = 942/1632
NC X-axis shows number of BLAST hits for
each of the NC sequences along the Y-axis

Max CN = 31
Total CN = 690/1632
CN X-axis shows number of BLAST hits for
each of the CN sequences along the Y-axis

Seq1 = 15 Seq2 = 18 Seq3 = 8 Seq4 = 9 Seq5 = 15 Seq6 = 5 Seq7 = 3 Seq8 = 3 Seq9 = 12 Seq10 = 20 Seq11 = 14 Seq12 = 1 Seq13 = 5 Seq14 = 11 Seq15 = 4 Seq16 = 22 Seq17 = 12 Seq18 = 8 Seq19 = 8 Seq20 = 9 Seq21 = 6 Seq22 = 1 Seq23 = 12 Seq24 = 10 Seq25 = 10 Seq26 = 1 Seq27 = 2 Seq28 = 2 Seq29 = 4 Seq30 = 6 Seq31 = 54 Seq32 = 15 Seq33 = 6 Seq34 = 5 Seq35 = 4 Seq36 = 7 Seq37 = 4 Seq38 = 1 Seq39 = 10 Seq40 = 5 Seq41 = 3 Seq42 = 28 Seq43 = 36 Seq44 = 3 Seq45 = 2 Seq46 = 13 Seq47 = 6 Seq48 = 5 Seq49 = 2 Seq50 = 10 Seq51 = 20 Seq52 = 2 Seq53 = 4 Seq54 = 2 Seq55 = 7 Seq56 = 11 Seq57 = 31 Seq58 = 14 Seq59 = 2 Seq60 = 6 Seq61 = 2 Seq62 = 2 Seq63 = 2 Seq64 = 10 Seq65 = 20 Seq66 = 4 Seq67 = 12 Seq68 = 15 Seq69 = 18 Seq70 = 17 Seq71 = 10 Seq72 = 3 Seq73 = 1 Seq74 = 6 Seq75 = 27 Seq76 = 20 Seq77 = 16 Seq78 = 4 Seq79 = 3 Seq80 = 3 Seq81 = 31 Seq82 = 26 Seq83 = 8 Seq84 = 7 Seq85 = 10 Seq86 = 17 Seq87 = 10 Seq88 = 8 Seq89 = 8 Seq90 = 14 Seq91 = 7 Seq92 = 9 Seq93 = 3 Seq94 = 8 Seq95 = 2 Seq96 = 2 Seq97 = 3 SeqR1 = 4 SeqR2 = 12 SeqR3 = 1 SeqR4 = 7 SeqR5 = 9 SeqR6 = 4 SeqR7 = 1 SeqR8 = 1 SeqR9 = 8 SeqR10 = 21 SeqR11 = 8 SeqR12 = 2 SeqR13 = 8 SeqR14 = 3 SeqR15 = 5 SeqR16 = 6 SeqR17 = 24 SeqR18 = 7 SeqR19 = 11 SeqR20 = 6 SeqR21 = 2 SeqR22 = 3 SeqR23 = 7 SeqR24 = 5 SeqR25 = 6 SeqR26 = 1 SeqR28 = 2 SeqR29 = 4 SeqR30 = 15 SeqR31 = 27 SeqR32 = 11 SeqR33 = 3 SeqR34 = 5 SeqR35 = 5 SeqR36 = 5 SeqR37 = 1 SeqR38 = 1 SeqR40 = 4 SeqR41 = 5 SeqR42 = 12 SeqR43 = 25 SeqR44 = 6 SeqR45 = 1 SeqR46 = 10 SeqR47 = 5 SeqR50 = 18 SeqR51 = 20 SeqR52 = 1 SeqR53 = 4 SeqR54 = 4 SeqR55 = 6 SeqR56 = 18 SeqR57 = 14 SeqR58 = 23 SeqR59 = 3 SeqR60 = 8 SeqR62 = 1 SeqR64 = 4 SeqR65 = 27 SeqR66 = 3 SeqR67 = 6 SeqR68 = 5 SeqR69 = 8 SeqR70 = 11 SeqR71 = 5 SeqR73 = 1 SeqR74 = 3 SeqR75 = 12 SeqR76 = 11 SeqR77 = 6 SeqR78 = 1 SeqR79 = 1 SeqR80 = 1 SeqR81 = 23 SeqR82 = 31 SeqR83 = 3 SeqR84 = 8 SeqR85 = 16 SeqR86 = 10 SeqR87 = 4 SeqR88 = 2 SeqR89 = 6 SeqR90 = 7 SeqR91 = 7 SeqR92 = 5 SeqR93 = 4 SeqR94 = 3 SeqR95 = 13 SeqR96 = 1 SeqR97 = 3

1 MKLLLLHPAF 15
2 LHPAFQSCLL 18
3 QSCLLLTLLG 8
4 LTLLGLWRTT 9
5 LWRTTPEAHA 15
6 PEAHASSLGA 5
7 SSLGAPAISA 3
8 PAISAASFLQ 3
9 ASFLQDLIHR 12
10 DLIHRYGEGD 20
11 YGEGDSLTLQ 14
12 SLTLQQLKAL 1
13 QLKALLNHLD 5
14 LNHLDVGVGR 11
15 VGVGRGNVTQ 4
16 GNVTQHVQGH 22
17 HVQGHRNLST 12
18 RNLSTCFSSG 8
19 CFSSGDLFTA 8
20 DLFTAHNFSE 9
21 HNFSEQSRIG 6
22 QSRIGSSELQ 1
23 SSELQEFCPT 12
24 EFCPTILQQL 10
25 ILQQLDSRAC 10
26 DSRACTSENQ 1
27 TSENQENEEN 2
28 ENEENEQTEE 2
29 EQTEEGRPSA 4
30 GRPSAVEVWG 6
31 VEVWGYGLLC 54
32 YGLLCVTVIS 15
33 VTVISLCSLL 6
34 LCSLLGASVV 5
35 GASVVPFMKK 4
36 PFMKKTFYKR 7
37 TFYKRLLLYF 4
38 LLLYFIALAI 1
39 IALAIGTLYS 10
40 GTLYSNALFQ 5
41 NALFQLIPEA 3
42 LIPEAFGFNP 28
43 FGFNPLEDYY 36
44 LEDYYVSKSA 3
45 VSKSAVVFGG 2
46 VVFGGFYLFF 13
47 FYLFFFTEKI 6
48 FTEKILKILL 5
49 LKILLKQKNE 2
50 KQKNEHHHGH 10
51 HHHGHSHYAS 20
52 SHYASESLPS 2
53 ESLPSKKDQE 4
54 KKDQEEGVME 2
55 EGVMEKLQNG 7
56 KLQNGDLDHM 11
57 DLDHMIPQHC 31
58 IPQHCSSELD 14
59 SSELDGKAPM 2
60 GKAPMVDEKV 6
61 VDEKVIVGSL 2
62 IVGSLSVQDL 2
63 SVQDLQASQS 2
64 QASQSACYWL 10
65 ACYWLKGVRY 20
66 KGVRYSDIGT 4
67 SDIGTLAWMI 12
68 LAWMITLSDG 15
69 TLSDGLHNFI 18
70 LHNFIDGLAI 17
71 DGLAIGASFT 10
72 GASFTVSVFQ 3
73 VSVFQGISTS 1
74 GISTSVAILC 6
75 VAILCEEFPH 27
76 EEFPHELGDF 20
77 ELGDFVILLN 16
78 VILLNAGMSI 4
79 AGMSIQQALF 3
80 QQALFFNFLS 3
81 FNFLSACCCY 31
82 ACCCYLGLAF 26
83 LGLAFGILAG 8
84 GILAGSHFSA 7
85 SHFSANWIFA 10
86 NWIFALAGGM 17
87 LAGGMFLYIS 10
88 FLYISLADMF 8
89 LADMFPEMNE 8
90 PEMNEVCQED 14
91 VCQEDERKGS 7
92 ERKGSILIPF 9
93 ILIPFIIQNL 3
94 IIQNLGLLTG 8
95 GLLTGFTIMV 2
96 FTIMVVLTMY 2
97 VLTMYSGQIQIG 3

1 FAPHLLLLKM 4
2 LLCSQFAPHL 12
3 GLLTLLLCSQ 1
4 TTRWLGLLTL 7
5 AHAEPTTRWL 9
6 AGLSSAHAEP 4
7 ASIAPAGLSS 1
8 QLFSAASIAP 1
9 RHILDQLFSA 8
10 DGEGYRHILD 21
11 QLTLSDGEGY 8
12 LAKLQQLTLS 2
13 DLHNLLAKLQ 8
14 RGVGVDLHNL 3
15 QTVNGRGVGV 5
16 HGQVHQTVNG 6
17 TSLNRHGQVH 24
18 GSSFCTSLNR 7
19 ATFLDGSSFC 11
20 ESFNHATFLD 6
21 GIRSQESFNH 2
22 QLESSGIRSQ 3
23 TPCFEQLESS 7
24 LQQLITPCFE 5
25 CARSDLQQLI 6
26 QNESTCARSD 1
27 NEENEQNEST 0
28 EETQENEENE 2
29 ASPRGEETQE 4
30 GWVEVASPRG 15
31 CLLGYGWVEV 27
32 SIVTVCLLGY 11
33 LLSCLSIVTV 3
34 VVSAGLLSCL 5
35 KKMFPVVSAG 5
36 RKYFTKKMFP 5
37 FYLLLRKYFT 1
38 IALAIFYLLL 1
39 SYLTGIALAI 0
40 QFLANSYLTG 4
41 AEPILQFLAN 5
42 PNFGFAEPIL 12
43 YYDELPNFGF 25
44 ASKSVYYDEL 6
45 GGFVVASKSV 1
46 FFLYFGGFVV 10
47 IKETFFFLYF 5
48 LLIKLIKETF 0
49 ENKQKLLIKL 0
50 HGHHHENKQK 18
51 SAYHSHGHHH 20
52 SPLSESAYHS 1
53 EQDKKSPLSE 4
54 EMVGEEQDKK 4
55 GNQLKEMVGE 6
56 MHDLDGNQLK 18
57 CHQPIMHDLD 14
58 DLESSCHQPI 23
59 MPAKGDLESS 3
60 VKEDVMPAKG 8
61 LSGVIVKEDV 0
62 LDQVSLSGVI 1
63 SQSAQLDQVS 0
64 LWYCASQSAQ 4
65 YRVGKLWYCA 27
66 TGIDSYRVGK 3
67 IMWALTGIDS 6
68 GDSLTIMWAL 5
69 IFNHLGDSLT 8
70 IALGDIFNHL 11
71 TFSAGIALGD 5
72 QFVSVTFSAG 0
73 STSIGQFVSV 1
74 CLIAVSTSIG 3
75 HPFEECLIAV 12
76 FDGLEHPFEE 11
77 NLLIVFDGLE 6
78 ISMGANLLIV 1
79 FLAQQISMGA 1
80 SLFNFFLAQQ 1
81 YCCCASLFNF 23
82 FALGLYCCCA 31
83 GALIGFALGL 3
84 ASFHSGALIG 8
85 AFIWNASFHS 16
86 MGGALAFIWN 10
87 SIYLFMGGAL 4
88 FMDALSIYLF 2
89 ENMEPFMDAL 6
90 DEQCVENMEP 7
91 SGKREDEQCV 7
92 FPILISGKRE 5
93 LNQIIFPILI 4
94 GTLLGLNQII 3
95 VMITFGTLLG 13
96 YMTLVVMITF 1
97 GIQIQGSYMTLV 3