S39AE_HUMAN Blast OutputR
Viruses
1|SequenceR|10|1|FAPHLLLLKM

***** No hits found ******


2|SequenceR|15|6|LLCSQFAPHL

>sp|RDRP_BBSCV|RNA replication polyprotein|Blueberry scorch virus (BBScV)

Query: 1 LLCSQFAPHL 10
LLCS+FA HL
Sbjct: 270 LLCSRFAHHL 279


>sp|RDRP_PVMR|RNA replication polyprotein|Potato virus M (strain Russian)

Query: 1 LLCSQFAPHL 10
+LCS+F HL
Sbjct: 272 VLCSKFPHHL 281


>sp|RDRP_SCVLB|PROBABLE RNA-directed RNA polymerase|Saccharomyces cerevisiae virus L-BC

Query: 3 CSQFAP 8
CS+FAP
Sbjct: 219 CSEFAP 224


>sp|GAG_SCVLB|MAJOR capsid protein|Saccharomyces cerevisiae virus L-BC (ScV-L-BC)

Query: 3 CSQFAP 8
CS+FAP
Sbjct: 219 CSEFAP 224


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 1 LLCSQFAPH 9
++C+ APH
Sbjct: 1269 IICADLAPH 1277


>sp|NS1_PAVBP|INITIATOR protein NS1|Bovine parvovirus 1 (BPV-1)

Query: 1 LLCSQFAPHL 10
+LC+ F HL
Sbjct: 142 ILCTSFFKHL 151


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 3 CSQFAPHL 10
CSQ AP++
Sbjct: 1717 CSQAAPYI 1724


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 3 CSQFAPHL 10
CSQ AP++
Sbjct: 1719 CSQSAPYI 1726


>sp|U24_HHV6U|U24 protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 LLCSQFAPHL 10
++C Q +PH+
Sbjct: 19 VMCGQVSPHV 28




3|SequenceR|20|11|GLLTLLLCSQ

>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1 GLLTLLLCS 9
GLL L LCS
Sbjct: 1134 GLLMLFLCS 1142


>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 GLLTLLLCS 9
GL+TL CS
Sbjct: 36 GLITLSACS 44


>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 GLLTLLLCS 9
GL+TL CS
Sbjct: 105 GLITLSACS 113




4|SequenceR|25|16|TTRWLGLLTL

>sp|L_TAMVU|RNA-DIRECTED RNA polymerase L|Tamiami mammarenavirus (isolate Rat/United States/W

Query: 1 TTRWLGL 7
TTRWL L
Sbjct: 1546 TTRWLNL 1552


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 3 RWLGLL 8
RWLG+L
Sbjct: 760 RWLGIL 765


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3 RWLGLL 8
RWLG+L
Sbjct: 760 RWLGIL 765




5|SequenceR|30|21|AHAEPTTRWL

>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 2 HAEPTTRWL 10
H PT RW+
Sbjct: 1198 HVRPTIRWI 1206


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 2 HAEPTTRWL 10
H PT RW+
Sbjct: 1198 HVRPTIRWI 1206


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 2 HAEPTTRWL 10
H PT RW+
Sbjct: 1199 HVRPTIRWI 1207


>sp|PKG3_ADECR|PACKAGING protein 3|Canine adenovirus serotype 1 (strain

Query: 3 AEPTTRWL 10
AEP +RWL
Sbjct: 193 AEPESRWL 200


>sp|PKG3_ADECC|PACKAGING protein 3|Canine adenovirus serotype 1 (strain

Query: 3 AEPTTRWL 10
AEP +RWL
Sbjct: 193 AEPESRWL 200


>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 1 AHAEPTTRWL 10
A+ EPTT W+
Sbjct: 630 ANPEPTTEWI 639


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 1 AHAEPTTRWL 10
A+ EPTT W+
Sbjct: 630 ANPEPTTEWI 639


>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)

Query: 1 AHAEPTTRWL 10
A+ EPTT W+
Sbjct: 630 ANPEPTTEWI 639


>sp|CAPSD_BPHA1|MAJOR capsid protein|Halomonas phage phiHAP-1 (isolate -/Gulf

Query: 2 HAEPTTR 8
H EPTTR
Sbjct: 173 HQEPTTR 179


>sp|PKG3_ADE12|PACKAGING protein 3|Human adenovirus A serotype 12

Query: 3 AEPTTRWL 10
AEP RWL
Sbjct: 212 AEPQGRWL 219


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 3 AEPTTR 8
AEPTTR
Sbjct: 469 AEPTTR 474


>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote

Query: 1 AHAEPTTRWL 10
AH +P+TR L
Sbjct: 4066 AHLKPSTRVL 4075


>sp|PKG3_ADEB3|PACKAGING protein 3|Bovine adenovirus B serotype 3

Query: 3 AEPTTRWL 10
AEP RW+
Sbjct: 213 AEPEGRWM 220


>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)

Query: 1 AHAEPTTR 8
AH EPT +
Sbjct: 272 AHGEPTVK 279




6|SequenceR|35|26|AGLSSAHAEP

>sp|CAPSD_TMGMV|CAPSID protein|Tobacco mild green mosaic virus

Query: 3 LSSAHAEP 10
LSSA+A+P
Sbjct: 14 LSSAYADP 21


>sp|CAPSD_OLV2I|CAPSID protein|Olive latent virus 2 (isolate

Query: 3 LSSAHAEP 10
LS+AHA P
Sbjct: 98 LSAAHARP 105




7|SequenceR|40|31|ASIAPAGLSS

>sp|RDRP_GLVWB|PROBABLE RNA-directed RNA polymerase|Giardia lamblia virus (isolate Wang)

Query: 1 ASIAPAG 7
ASIAPAG
Sbjct: 60 ASIAPAG 66


>sp|CAPSD_GLVWB|MAJOR capsid protein|Giardia lamblia virus (isolate Wang)

Query: 1 ASIAPAG 7
ASIAPAG
Sbjct: 60 ASIAPAG 66




8|SequenceR|45|36|QLFSAASIAP

***** No hits found ******


9|SequenceR|50|41|RHILDQLFSA

>sp|PG165_VACCC|PROTEIN OPG165|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 RHILDQLFS 9
RHI DQ+F+
Sbjct: 170 RHICDQIFA 178


>sp|PG165_VACCW|PROTEIN OPG165|Vaccinia virus (strain Western Reserve)

Query: 1 RHILDQLFS 9
RHI DQ+F+
Sbjct: 170 RHICDQIFA 178


>sp|PG165_MONPV|PROTEIN OPG165|Monkeypox virus (MPXV)

Query: 1 RHILDQLFS 9
RHI DQ+F+
Sbjct: 175 RHICDQIFA 183


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1 RHILDQLFS 9
+HI D LFS
Sbjct: 2066 KHITDPLFS 2074


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1 RHILDQLFS 9
+HI D LFS
Sbjct: 2066 KHITDPLFS 2074


>sp|Y033_OSHVF|UNCHARACTERIZED protein ORF33|Ostreid herpesvirus 1 (isolate France)

Query: 4 LDQLFSA 10
+DQLFSA
Sbjct: 69 IDQLFSA 75


>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)

Query: 1 RHILDQLFSA 10
+HI D+LF +
Sbjct: 765 KHITDRLFKS 774


>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain

Query: 1 RHILDQLFSA 10
+HI D+LF +
Sbjct: 765 KHITDRLFKS 774




10|SequenceR|55|46|DGEGYRHILD

>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)

Query: 2 GEGYRHI 8
G+GYRH+
Sbjct: 183 GQGYRHM 189


>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)

Query: 2 GEGYRHI 8
G+GYRH+
Sbjct: 183 GQGYRHM 189


>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 2 GEGYRHI 8
G+GYRH+
Sbjct: 183 GQGYRHM 189


>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)

Query: 2 GEGYRHI 8
G+GYRH+
Sbjct: 183 GQGYRHM 189


>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)

Query: 2 GEGYRHI 8
G+GYRH+
Sbjct: 183 GQGYRHM 189


>sp|UDPE_NPVOP|ECDYSTEROID UDP-glucosyltransferase|Orgyia pseudotsugata multicapsid

Query: 1 DGEGYRHILD 10
DGE YR +D
Sbjct: 425 DGEAYRARID 434


>sp|V143_NPVOP|ATP-DEPENDENT DNA helicase P143|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 5 YRHILD 10
YRHI+D
Sbjct: 279 YRHIID 284


>sp|GH_MUHVS|ENVELOPE glycoprotein H|Murid herpesvirus 1 (strain Smith)

Query: 1 DGEGYR 6
DG+GYR
Sbjct: 65 DGDGYR 70


>sp|1104B_ASFL5|PROTEIN MGF 110-4L-B|African swine fever virus (isolate

Query: 1 DGEGYRHILD 10
+G G+ H++D
Sbjct: 92 EGNGHYHVMD 101


>sp|1104L_ASFWA|PROTEIN MGF 110-4L|African swine fever virus (isolate

Query: 1 DGEGYRHILD 10
+G G+ H++D
Sbjct: 93 EGNGHYHVMD 102


>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 4 GYRHILD 10
GYRH+ D
Sbjct: 894 GYRHLKD 900


>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 GYRHILD 10
GYRH+ D
Sbjct: 894 GYRHLKD 900


>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 GYRHILD 10
GYRH+ D
Sbjct: 893 GYRHLKD 899


>sp|1104L_ASFM2|PROTEIN MGF 110-4L|African swine fever virus (isolate

Query: 1 DGEGYRHILD 10
+G G+ H++D
Sbjct: 92 EGNGHYHVMD 101


>sp|1104L_ASFP4|PROTEIN MGF 110-4L|African swine fever virus (isolate

Query: 1 DGEGYRHILD 10
+G G+ H++D
Sbjct: 92 EGNGHYHVMD 101


>sp|1105L_ASFPP|PROTEIN MGF 110-5L|African swine fever virus (isolate

Query: 1 DGEGYRHILD 10
+G G+ H++D
Sbjct: 92 EGNGHYHVMD 101


>sp|1104L_ASFB7|PROTEIN MGF 110-4L|African swine fever virus (strain

Query: 1 DGEGYRHILD 10
+G G+ H++D
Sbjct: 92 EGNGHYHVMD 101


>sp|1104L_ASFK5|PROTEIN MGF 110-4L|African swine fever virus (isolate

Query: 1 DGEGYRHILD 10
+G G+ H++D
Sbjct: 92 EGNGHYHVMD 101


>sp|1104L_ASFPP|PROTEIN MGF 110-4L|African swine fever virus (isolate

Query: 1 DGEGYRHILD 10
+G G+ H++D
Sbjct: 92 EGNGHYHVMD 101


>sp|1104L_ASFL5|PROTEIN MGF 110-4L|African swine fever virus (isolate

Query: 1 DGEGYRHILD 10
+G G+ H++D
Sbjct: 92 EGNGHYHVMD 101


>sp|RDRP_MYRV9|RNA-DIRECTED RNA polymerase VP1|Cryphonectria parasitica mycoreovirus 1 (strain

Query: 1 DGEGYRHIL 9
D GY HI+
Sbjct: 1185 DAHGYGHII 1193




11|SequenceR|60|51|QLTLSDGEGY

>sp|TUB11_BPPZA|PROXIMAL tail tube connector protein|Bacillus phage PZA (Bacteriophage PZA)

Query: 1 QLTLSDGEG 9
QLT DGEG
Sbjct: 177 QLTTKDGEG 185


>sp|TUB11_BPPH2|PROXIMAL tail tube connector protein|Bacillus phage phi29 (Bacteriophage

Query: 1 QLTLSDGEG 9
QLT DGEG
Sbjct: 177 QLTTKDGEG 185


>sp|VP5_RRSVT|PUTATIVE minor structural protein VP5|Rice ragged stunt virus (isolate

Query: 2 LTLSDGE 8
LTL+DGE
Sbjct: 382 LTLTDGE 388


>sp|SCP_EHV2|SMALL capsomere-interacting protein|Equine herpesvirus 2 (strain 86/87)

Query: 4 LSDGEGY 10
L DGEGY
Sbjct: 11 LGDGEGY 17


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 2 LTLSDGEG 9
+TL++GEG
Sbjct: 1829 ITLAEGEG 1836


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 2 LTLSDGEG 9
+TL++GEG
Sbjct: 1829 ITLAEGEG 1836




12|SequenceR|65|56|LAKLQQLTLS

>sp|A1_BPSP|MINOR capsid protein A1|Enterobacteria phage SP (Bacteriophage SP)

Query: 1 LAKLQQLTLS 10
+AKL Q+TLS
Sbjct: 1 MAKLNQVTLS 10


>sp|A1_BPMX1|MINOR capsid protein A1|Qbeta virus (strain MX1)

Query: 1 LAKLQQLTLS 10
+AKLQ +TLS
Sbjct: 1 MAKLQAITLS 10


>sp|CAPSD_BPSP|CAPSID protein|Enterobacteria phage SP (Bacteriophage SP)

Query: 1 LAKLQQLTLS 10
+AKL Q+TLS
Sbjct: 1 MAKLNQVTLS 10


>sp|CAPSD_BPMX1|CAPSID protein|Qbeta virus (strain MX1)

Query: 1 LAKLQQLTLS 10
+AKLQ +TLS
Sbjct: 1 MAKLQAITLS 10




13|SequenceR|70|61|DLHNLLAKLQ

>sp|HELI1_HVAVE|PUTATIVE ATP-dependent RNA helicase|Heliothis virescens ascovirus 3e

Query: 2 LHNLLAKL 9
LHNLL KL
Sbjct: 228 LHNLLMKL 235


>sp|Y043_OSHVF|UNCHARACTERIZED protein ORF43|Ostreid herpesvirus 1 (isolate France)

Query: 1 DLHNLLA 7
DLHNL++
Sbjct: 84 DLHNLMS 90


>sp|HELI1_TNAVC|PUTATIVE ATP-dependent RNA helicase|Trichoplusia ni ascovirus 2c (TnAV-2c)

Query: 2 LHNLLAKLQ 10
LHNL+ K Q
Sbjct: 230 LHNLMMKKQ 238




14|SequenceR|75|66|RGVGVDLHNL

>sp|YL364_MIMIV|PUTATIVE ATP-dependent RNA helicase L364|Acanthamoeba polyphaga mimivirus

Query: 2 GVGVDLHNL 10
GVG+ LH+L
Sbjct: 407 GVGISLHDL 415


>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)

Query: 1 RGVGVDLHNL 10
+G+G D+H+L
Sbjct: 709 QGIGADVHHL 718


>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)

Query: 1 RGVGVDLHNL 10
+G+G D+H+L
Sbjct: 708 QGIGADVHHL 717


>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean

Query: 1 RGVGVDLHNL 10
+G+G D+H+L
Sbjct: 708 QGIGADVHHL 717


>sp|PCNA_MIMIV|PROBABLE DNA polymerase sliding clamp|Acanthamoeba polyphaga mimivirus

Query: 3 VGVDLHNL 10
VGVD+H L
Sbjct: 277 VGVDMHTL 284


>sp|MCP_EHV2|MAJOR capsid protein|Equine herpesvirus 2 (strain 86/87)

Query: 2 GVGVDLHNL 10
G+GVD +NL
Sbjct: 827 GMGVDFNNL 835


>sp|SPIKE_ADE08|FIBER protein|Human adenovirus D serotype 8

Query: 1 RGVGVDLHN 9
+G+G DL N
Sbjct: 139 KGIGTDLSN 147


>sp|VG48_SHV21|UNCHARACTERIZED gene 48 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 RGVGVDL 7
RG+G+DL
Sbjct: 305 RGIGMDL 311


>sp|VP5_LBVAV|PROTEIN 5|Lettuce big-vein associated virus (isolate

Query: 1 RGVGVDLHNL 10
RG+G D +L
Sbjct: 314 RGIGADFRHL 323


>sp|VP7_AQRVC|OUTER capsid protein VP7|Aquareovirus C (isolate Golden

Query: 3 VGVDLH 8
VG+DLH
Sbjct: 266 VGIDLH 271




15|SequenceR|80|71|QTVNGRGVGV

>sp|R1A_CVPPU|REPLICASE polyprotein 1a|Porcine transmissible gastroenteritis coronavirus

Query: 1 QTVNGRGVGV 10
+TVN RG+ V
Sbjct: 1461 KTVNDRGLNV 1470


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 1 QTVNGRGVGV 10
+TVN RG+ V
Sbjct: 1461 KTVNDRGLNV 1470


>sp|VE2_HPV49|REGULATORY protein E2|Human papillomavirus type 49

Query: 1 QTVNGRGVG 9
QTV+GR +G
Sbjct: 385 QTVSGRHLG 393


>sp|YR135_MIMIV|PUTATIVE GMC-type oxidoreductase R135|Acanthamoeba polyphaga mimivirus

Query: 4 NGRGVG 9
NGRG+G
Sbjct: 295 NGRGIG 300


>sp|CAPSD_PMTVS|CAPSID protein|Potato mop-top virus (isolate Potato/Sweden/Sw)

Query: 1 QTVNGRG 7
QTVNG G
Sbjct: 109 QTVNGEG 115




16|SequenceR|85|76|HGQVHQTVNG

>sp|ICP4_GAHVM|MAJOR viral transcription factor ICP4|Gallid herpesvirus 2 (strain

Query: 1 HGQVHQTV 8
HG+V+Q+V
Sbjct: 1402 HGRVYQSV 1409


>sp|ICP4_GAHVG|MAJOR viral transcription factor ICP4|Gallid herpesvirus 2 (strain GA)

Query: 1 HGQVHQTV 8
HG+V+Q+V
Sbjct: 496 HGRVYQSV 503


>sp|US03_GAHVM|PROTEIN kinase US3 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 HGQVHQTVNG 10
+G +H ++NG
Sbjct: 28 YGIIHNSING 37


>sp|US03_GAHVG|SERINE/THREONINE-PROTEIN kinase US3 homolog|Gallid herpesvirus 2 (strain GA)

Query: 1 HGQVHQTVNG 10
+G +H ++NG
Sbjct: 28 YGIIHNSING 37


>sp|RDRP_MPRVN|RNA-DIRECTED RNA polymerase VP2|Micromonas pusilla reovirus (isolate

Query: 2 GQVHQTVNG 10
GQV T+NG
Sbjct: 865 GQVMDTLNG 873


>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)

Query: 2 GQVHQTVNG 10
G H TVNG
Sbjct: 948 GNCHLTVNG 956


>sp|VP10_MPRVN|UNCHARACTERIZED protein VP10|Micromonas pusilla reovirus (isolate

Query: 4 VHQTVNG 10
VHQT NG
Sbjct: 52 VHQTTNG 58


>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)

Query: 2 GQVHQTVNG 10
G H TVNG
Sbjct: 948 GNCHLTVNG 956


>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)

Query: 2 GQVHQTVNG 10
G H TVNG
Sbjct: 948 GNCHLTVNG 956


>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)

Query: 2 GQVHQTVNG 10
G H TVNG
Sbjct: 948 GNCHLTVNG 956


>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)

Query: 2 GQVHQTVNG 10
G H TVNG
Sbjct: 948 GNCHLTVNG 956




17|SequenceR|90|81|TSLNRHGQVH

>sp|POL2_CRLVP|RNA2 polyprotein|Cherry rasp leaf virus (isolate

Query: 2 SLNRHGQVH 10
SLNR G VH
Sbjct: 698 SLNRSGTVH 706




18|SequenceR|95|86|GSSFCTSLNR

>sp|SPIKE_BCRP3|SPIKE glycoprotein|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 3 SFCTSLNR 10
SFCT LNR
Sbjct: 726 SFCTQLNR 733


>sp|SPIKE_BCHK3|SPIKE glycoprotein|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 3 SFCTSLNR 10
SFCT LNR
Sbjct: 727 SFCTQLNR 734


>sp|SPIKE_BC279|SPIKE glycoprotein|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 3 SFCTSLNR 10
SFCT LNR
Sbjct: 726 SFCTQLNR 733


>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 3 SFCTSLNR 10
SFCT LNR
Sbjct: 758 SFCTQLNR 765


>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 3 SFCTSLNR 10
SFCT LNR
Sbjct: 740 SFCTQLNR 747


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 2 SSFCTSLNR 10
SSF T+LNR
Sbjct: 2004 SSFTTALNR 2012


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 2 SSFCTSLNR 10
SSF T+LNR
Sbjct: 2004 SSFTTALNR 2012


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 2 SSFCTSLNR 10
SSF T+LNR
Sbjct: 2004 SSFTTALNR 2012


>sp|YORI_TTV1K|UNCHARACTERIZED 16.5 kDa protein|Thermoproteus tenax virus 1 (strain

Query: 1 GSSFCTSLNR 10
G+ CT +NR
Sbjct: 107 GADLCTKVNR 116


>sp|ORF3_TTVI1|UNCHARACTERIZED ORF3 protein|Torque teno sus virus 1

Query: 1 GSSFCTSL 8
GS+ CTSL
Sbjct: 73 GSAACTSL 80


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 2 SSFCTSLN 9
+ FCTS+N
Sbjct: 6824 TCFCTSVN 6831


>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human

Query: 2 SSFCTSL 8
S FCTSL
Sbjct: 447 SMFCTSL 453


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 4 FCTSLN 9
FCTS+N
Sbjct: 6601 FCTSVN 6606


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 4 FCTSLN 9
FCTS+N
Sbjct: 6576 FCTSVN 6581




19|SequenceR|100|91|ATFLDGSSFC

>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 TFLDGSSFC 10
+F +GSSFC
Sbjct: 249 SFPEGSSFC 257


>sp|HOLIN_BPA18|PUTATIVE antiholin|Listeria phage A118 (Bacteriophage A118)

Query: 1 ATFLDGS 7
ATFLDGS
Sbjct: 54 ATFLDGS 60


>sp|YR419_MIMIV|UNCHARACTERIZED short-chain type dehydrogenase/reductase R419|Acanthamoeba

Query: 1 ATFLDGSSFC 10
ATF+ G +FC
Sbjct: 175 ATFIMGMTFC 184


>sp|DNBI_ALHV1|MAJOR DNA-binding protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 ATFLDGSSF 9
A+ LDGSSF
Sbjct: 395 ASSLDGSSF 403


>sp|L_SENDO|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Ohita) (SeV)

Query: 1 ATFLDGSSFC 10
TF++GS C
Sbjct: 1168 GTFIEGSEVC 1177


>sp|L_SENDF|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Fushimi) (SeV)

Query: 1 ATFLDGSSFC 10
TF++GS C
Sbjct: 1168 GTFIEGSEVC 1177


>sp|L_SENDE|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Enders) (SeV)

Query: 1 ATFLDGSSFC 10
TF++GS C
Sbjct: 1168 GTFIEGSEVC 1177


>sp|L_SENDA|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Hamamatsu) (SeV)

Query: 1 ATFLDGSSFC 10
TF++GS C
Sbjct: 1168 GTFIEGSEVC 1177


>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)

Query: 1 ATFLDGSS 8
ATFLDG +
Sbjct: 252 ATFLDGGN 259


>sp|5053R_ASFB7|PROTEIN MGF 505-3R|African swine fever virus (strain

Query: 3 FLDGSSFC 10
FLDG +C
Sbjct: 156 FLDGWEYC 163


>sp|HELIC_BPT7|DNA helicase/primase|Escherichia phage T7 (Bacteriophage T7)

Query: 3 FLDGSSFC 10
F DG +FC
Sbjct: 29 FSDGHTFC 36




20|SequenceR|105|96|ESFNHATFLD

>sp|GK_VZVO|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Oka vaccine)

Query: 4 NHATFLD 10
NH+TFLD
Sbjct: 65 NHSTFLD 71


>sp|GK_VZVD|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4 NHATFLD 10
NH+TFLD
Sbjct: 65 NHSTFLD 71


>sp|VINT_BPSFV|INTEGRASE phage Sf6 (Shigella flexneri

Query: 3 FNHATFLD 10
+NHA +LD
Sbjct: 360 YNHAQYLD 367


>sp|VP8_MYRV9|UNCHARACTERIZED protein VP8|Cryphonectria parasitica mycoreovirus 1 (strain

Query: 1 ESFNHATFLD 10
E+ +H TFLD
Sbjct: 73 ETVHHPTFLD 82


>sp|SPI1_RABPU|SERINE proteinase inhibitor 1|Rabbitpox virus (strain Utrecht) (RPV)

Query: 1 ESFNHATFLD 10
E F H TF+D
Sbjct: 294 EKFLHTTFID 303


>sp|SPI1_VARV|SERINE proteinase inhibitor 1|Variola virus

Query: 1 ESFNHATFLD 10
E F H TF+D
Sbjct: 309 EKFLHKTFID 318


>sp|SPI1_VAR67|SERINE proteinase inhibitor 1|Variola virus (isolate

Query: 1 ESFNHATFLD 10
E F H TF+D
Sbjct: 309 EKFLHKTFID 318


>sp|SPI1_MONPV|SERINE proteinase inhibitor 1|Monkeypox virus (MPXV)

Query: 1 ESFNHATFLD 10
E F H TF+D
Sbjct: 294 EKFLHTTFID 303


>sp|SPI1_VACCC|SERINE proteinase inhibitor 1|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 ESFNHATFLD 10
E F H TF+D
Sbjct: 290 EKFLHTTFID 299


>sp|SPI1_VACCW|SERINE proteinase inhibitor 1|Vaccinia virus (strain Western Reserve)

Query: 1 ESFNHATFLD 10
E F H TF+D
Sbjct: 290 EKFLHTTFID 299


>sp|SPI1_CWPXB|SERINE proteinase inhibitor 1|Cowpox virus (strain Brighton Red)

Query: 1 ESFNHATFLD 10
E F H TF+D
Sbjct: 292 EKFLHKTFID 301




21|SequenceR|110|101|GIRSQESFNH

>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 3 RSQESFNH 10
++QESF+H
Sbjct: 215 KTQESFDH 222


>sp|PG130_MONPV|39KDA core protein OPG130|Monkeypox virus (MPXV)

Query: 1 GIRSQESF 8
G++SQES+
Sbjct: 40 GLKSQESY 47


>sp|RDRP_AMV|RNA-DIRECTED RNA polymerase 2a|Alfalfa mosaic virus (AMV)

Query: 1 GIRSQESFNH 10
G+RS +S+ H
Sbjct: 439 GVRSIDSYKH 448


>sp|PG130_VACCC|39KDA core protein OPG130|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 GIRSQESF 8
G++SQES+
Sbjct: 40 GLKSQESY 47


>sp|PG130_VACCW|39KDA core protein OPG130|Vaccinia virus (strain Western Reserve)

Query: 1 GIRSQESF 8
G++SQES+
Sbjct: 40 GLKSQESY 47


>sp|MVP_CILVC|PUTATIVE movement protein|Citrus leprosis virus C (isolate

Query: 1 GIRSQESF 8
G+RS ESF
Sbjct: 74 GVRSVESF 81


>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 1 GIRSQESFNH 10
G+R+ ++ NH
Sbjct: 1821 GLRTNQAINH 1830


>sp|PG130_VARV|39KDA core protein OPG130|Variola virus

Query: 1 GIRSQESF 8
G++SQES+
Sbjct: 40 GLKSQESY 47


>sp|PG130_VAR67|39KDA core protein OPG130|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 GIRSQESF 8
G++SQES+
Sbjct: 40 GLKSQESY 47




22|SequenceR|115|106|QLESSGIRSQ

>sp|RDRP_CMVFN|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain FNY)

Query: 1 QLESSGIRSQ 10
Q ES+G RSQ
Sbjct: 807 QTESTGTRSQ 816


>sp|RDRP_CMVY|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain Y)

Query: 1 QLESSGIRSQ 10
Q ES+G RSQ
Sbjct: 807 QTESTGTRSQ 816


>sp|RDRP_CMVAS|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain As)

Query: 1 QLESSGIRSQ 10
Q ES+G RSQ
Sbjct: 808 QAESTGTRSQ 817


>sp|RDRP_CMVKO|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain Kor)

Query: 1 QLESSGIRSQ 10
Q ES+G RSQ
Sbjct: 807 QAESTGTRSQ 816


>sp|RDRP_CMVK|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain K)

Query: 1 QLESSGIRSQ 10
Q ES+G RSQ
Sbjct: 808 QAESTGTRSQ 817


>sp|RDRP_CMVB|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain B)

Query: 1 QLESSGIRSQ 10
Q ES+G RSQ
Sbjct: 807 QTESTGTRSQ 816


>sp|VP47_BPAPS|PUTATIVE protein p47|Acyrthosiphon pisum secondary endosymbiont phage

Query: 1 QLESSGIRSQ 10
QLE SGIR++
Sbjct: 153 QLEMSGIRAE 162




23|SequenceR|120|111|TPCFEQLESS

>sp|Y051_NPVAC|UNCHARACTERIZED 37.5 kDa protein in|Autographa californica nuclear polyhedrosis

Query: 2 PCFEQL 7
PCFEQ
Sbjct: 234 PCFEQF 239


>sp|VE7_HPV42|PROTEIN E7|Human papillomavirus 42

Query: 3 CFEQLESS 10
C+EQL+SS
Sbjct: 27 CYEQLDSS 34


>sp|GP2B_EAVBU|GLYCOPROTEIN 2b|Equine arteritis virus (strain Bucyrus)

Query: 3 CFEQLESS 10
CF+ LESS
Sbjct: 102 CFDHLESS 109


>sp|L_BDV1|RNA-DIRECTED RNA polymerase L|Borna disease virus 1 (BoDV-1)

Query: 2 PCFEQLE 8
PC E+LE
Sbjct: 1556 PCLEELE 1562


>sp|L_BDVV|RNA-DIRECTED RNA polymerase L|Borna disease virus (strain V)

Query: 2 PCFEQLE 8
PC E+LE
Sbjct: 1556 PCLEELE 1562




24|SequenceR|125|116|LQQLITPCFE

>sp|YR632_MIMIV|UNCHARACTERIZED protein R632|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 QLITPCF 9
QLI+PC+
Sbjct: 217 QLISPCY 223


>sp|457L_IIV6|UNCHARACTERIZED protein 457L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 LQQLITPCF 9
Q+L+T CF
Sbjct: 141 FQELVTACF 149




25|SequenceR|130|121|CARSDLQQLI

>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)

Query: 1 CARSDLQQLI 10
CA+ QQLI
Sbjct: 1743 CAQDSFQQLI 1752


>sp|UL33_MUHVS|G-PROTEIN coupled receptor homolog M33|Murid herpesvirus 1 (strain Smith)

Query: 1 CARSDLQQ 8
C+RS+LQ+
Sbjct: 362 CSRSELQR 369


>sp|RDRP_SBWMN|REPLICASE large subunit|Soil-borne wheat mosaic virus (strain

Query: 1 CARSDLQQL 9
CA SDL+++
Sbjct: 1069 CAESDLKRI 1077




26|SequenceR|135|126|QNESTCARSD

>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)

Query: 4 STCARS 9
STCARS
Sbjct: 18 STCARS 23


>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)

Query: 4 STCARS 9
STCARS
Sbjct: 18 STCARS 23




27|SequenceR|140|131|NEENEQNEST

>sp|CEP1_ALHV1|CYTOPLASMIC envelopment protein 1|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 NEENEQNES 9
NEENEQ E+
Sbjct: 210 NEENEQLEA 218


>sp|RDRP_GLVWB|PROBABLE RNA-directed RNA polymerase|Giardia lamblia virus (isolate Wang)

Query: 1 NEENEQNES 9
N+ENE N +
Sbjct: 76 NQENEDNHA 84


>sp|CAPSD_GLVWB|MAJOR capsid protein|Giardia lamblia virus (isolate Wang)

Query: 1 NEENEQNES 9
N+ENE N +
Sbjct: 76 NQENEDNHA 84




28|SequenceR|145|136|EETQENEENE

>sp|RDRP_GLVWB|PROBABLE RNA-directed RNA polymerase|Giardia lamblia virus (isolate Wang)

Query: 1 EETQENEEN 9
++ QENE+N
Sbjct: 74 QQNQENEDN 82


Query: 4 QENEENE 10
Q+N+ENE
Sbjct: 74 QQNQENE 80


>sp|CAPSD_GLVWB|MAJOR capsid protein|Giardia lamblia virus (isolate Wang)

Query: 1 EETQENEEN 9
++ QENE+N
Sbjct: 74 QQNQENEDN 82


Query: 4 QENEENE 10
Q+N+ENE
Sbjct: 74 QQNQENE 80


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2 ETQENEENE 10
E+Q NEE+E
Sbjct: 2767 ESQGNEEDE 2775


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2 ETQENEENE 10
E+Q NEE+E
Sbjct: 2767 ESQGNEEDE 2775


>sp|MT_POVHA|MIDDLE T antigen|Hamster polyomavirus (HaPyV) (Mesocricetus auratus

Query: 1 EETQENEENE 10
+ETQ ENE
Sbjct: 288 QETQAERENE 297


>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)

Query: 3 TQENEE 8
TQENEE
Sbjct: 251 TQENEE 256


>sp|SPIKE_ADE12|FIBER protein|Human adenovirus A serotype 12

Query: 1 EETQENEE 8
EET+EN++
Sbjct: 10 EETEENDD 17




29|SequenceR|150|141|ASPRGEETQE

>sp|NRAM_I63A3|NEURAMINIDASE A virus (strain A/Duck/Ukraine/1/1963

Query: 2 SPRGEETQ 9
+PRGE+TQ
Sbjct: 323 TPRGEDTQ 330


>sp|NRAM_I72A0|NEURAMINIDASE A virus (strain A/Equine/Algiers/1972

Query: 2 SPRGEETQ 9
+PRGE++Q
Sbjct: 323 TPRGEDSQ 330


>sp|NRAM_I81A2|NEURAMINIDASE A virus (strain A/Equine/Kentucky/1/1981)

Query: 2 SPRGEETQ 9
+PRGE++Q
Sbjct: 323 TPRGEDSQ 330


>sp|NRAM_I79A6|NEURAMINIDASE A virus (strain A/Equine/New

Query: 2 SPRGEETQ 9
+PRGE++Q
Sbjct: 323 TPRGEDSQ 330


>sp|NRAM_I86A3|NEURAMINIDASE A virus (strain A/Equine/Tennessee/5/1986

Query: 2 SPRGEETQ 9
+PRGE++Q
Sbjct: 323 TPRGEDSQ 330


>sp|NRAM_I91A0|NEURAMINIDASE A virus (strain A/Equine/Alaska/1/1991

Query: 2 SPRGEETQ 9
+PRGE++Q
Sbjct: 323 TPRGEDSQ 330


>sp|NRAM_I69A2|NEURAMINIDASE A virus (strain A/Equine/Sao

Query: 2 SPRGEETQ 9
+PRGE++Q
Sbjct: 323 TPRGEDSQ 330


>sp|NRAM_I85A5|NEURAMINIDASE A virus (strain A/Equine/Santiago/1/1985

Query: 2 SPRGEETQ 9
+PRGE++Q
Sbjct: 323 TPRGEDSQ 330


>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus

Query: 1 ASPRGEET 8
SP GEET
Sbjct: 615 GSPEGEET 622


>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate

Query: 1 ASPRGEET 8
SP GEET
Sbjct: 615 GSPEGEET 622


>sp|PG136_VACCW|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Western

Query: 1 ASPRGEET 8
SP GEET
Sbjct: 614 GSPEGEET 621


>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)

Query: 1 ASPRGEET 8
SP GEET
Sbjct: 614 GSPEGEET 621


>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)

Query: 1 ASPRGEET 8
SP GEET
Sbjct: 614 GSPEGEET 621


>sp|NRAM_I63A2|NEURAMINIDASE A virus (strain A/Equine/Miami/1/1963

Query: 2 SPRGEETQ 9
+PRGE++Q
Sbjct: 323 TPRGEDSQ 330


>sp|NRAM_I90A1|NEURAMINIDASE A virus (strain A/Mallard/Edmonton/220/1990

Query: 2 SPRGEETQ 9
+PRGE++Q
Sbjct: 323 TPRGEDSQ 330


>sp|NRAM_I83A4|NEURAMINIDASE A virus (strain A/Turkey/Ireland/1378/1983

Query: 2 SPRGEETQ 9
+PRGE+ Q
Sbjct: 323 TPRGEDAQ 330


>sp|NRAM_I63A1|NEURAMINIDASE A virus (strain A/Turkey/Canada/1963

Query: 2 SPRGEETQ 9
+PRGE++Q
Sbjct: 323 TPRGEDSQ 330


>sp|SPIKE_BCHK5|SPIKE glycoprotein|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 ASPRGE 6
ASPRGE
Sbjct: 376 ASPRGE 381


>sp|NRAM_I88A4|NEURAMINIDASE A virus (strain A/Herring

Query: 2 SPRGEETQ 9
+PRGE++Q
Sbjct: 323 TPRGEDSQ 330


>sp|NRAM_I74A2|NEURAMINIDASE A virus (strain A/Duck/Memphis/928/1974

Query: 2 SPRGEETQ 9
+PRGE++Q
Sbjct: 323 TPRGEDSQ 330


>sp|NRAM_I84A0|NEURAMINIDASE A virus (strain A/Guinea

Query: 2 SPRGEETQ 9
+PRGE++Q
Sbjct: 323 TPRGEDSQ 330


>sp|NRAM_I78AC|NEURAMINIDASE A virus (strain A/Turkey/Minnesota/501/1978

Query: 2 SPRGEETQ 9
+PRGE++Q
Sbjct: 323 TPRGEDSQ 330


>sp|NRAM_I72A1|NEURAMINIDASE A virus (strain A/Duck/Chabarovsk/1610/1972

Query: 2 SPRGEETQ 9
+PRGE+ Q
Sbjct: 323 TPRGEDAQ 330


>sp|NRAM_I89A7|NEURAMINIDASE A virus (strain A/Equine/Jillin/1/1989

Query: 2 SPRGEETQ 9
+PRGE+ Q
Sbjct: 323 TPRGEDAQ 330


>sp|NRAM_I88A1|NEURAMINIDASE A virus (strain A/Duck/Burjatia/652/1988

Query: 2 SPRGEETQ 9
+PRGE+ Q
Sbjct: 323 TPRGEDAQ 330


>sp|NRAM_I80A6|NEURAMINIDASE A virus (strain A/Duck/Hokkaido/8/1980

Query: 2 SPRGEETQ 9
+PRGE+ Q
Sbjct: 323 TPRGEDAQ 330




30|SequenceR|155|146|GWVEVASPRG

>sp|POLN_DCVEB|REPLICASE polyprotein|Drosophila C virus (strain EB)

Query: 1 GWVEVASP 8
GW++ SP
Sbjct: 634 GWIDSGSP 641


>sp|RDRP_TCV|RNA-DIRECTED RNA polymerase|Turnip crinkle virus (TCV)

Query: 1 GWVEVASPR 9
GWV V +PR
Sbjct: 625 GWVMVRNPR 633


>sp|HBSAG_HPBDW|LARGE envelope protein|Duck hepatitis B virus (isolate

Query: 2 WVEVASPRG 10
W+ ++SP+G
Sbjct: 199 WISLSSPKG 207


>sp|HBSAG_DHBVQ|LARGE envelope protein|Duck hepatitis B virus (isolate

Query: 2 WVEVASPRG 10
W+ ++SP+G
Sbjct: 199 WISLSSPKG 207


>sp|HBSAG_HPBDB|LARGE envelope protein|Duck hepatitis B virus (isolate

Query: 2 WVEVASPRG 10
W+ ++SP+G
Sbjct: 199 WISLSSPKG 207


>sp|RDRP_SCVLB|PROBABLE RNA-directed RNA polymerase|Saccharomyces cerevisiae virus L-BC

Query: 2 WVEVASPRG 10
WV + P G
Sbjct: 578 WVSIVDPNG 586


>sp|GAG_SCVLB|MAJOR capsid protein|Saccharomyces cerevisiae virus L-BC (ScV-L-BC)

Query: 2 WVEVASPRG 10
WV + P G
Sbjct: 578 WVSIVDPNG 586


>sp|HBSAG_DHBV3|LARGE envelope protein|Duck hepatitis B virus (strain

Query: 2 WVEVASPRG 10
W+ ++SP+G
Sbjct: 197 WISLSSPKG 205


>sp|HBSAG_HPBDC|LARGE envelope protein|Duck hepatitis B virus (strain

Query: 2 WVEVASPRG 10
W+ ++SP+G
Sbjct: 198 WISLSSPKG 206


>sp|VP1_CPBDV|VIRAL protein 1|Chaetoceros protobacilladnavirus 2 (Chaetoceros sp

Query: 2 WVEVASPRG 10
W EV +P G
Sbjct: 18 WEEVLAPEG 26


>sp|HBSAG_DHBV1|LARGE envelope protein|Duck hepatitis B virus (strain

Query: 2 WVEVASPRG 10
W+ ++SP+G
Sbjct: 197 WISLSSPKG 205


>sp|VP5_AQRVG|MICROTUBULE-ASSOCIATED protein VP5|Aquareovirus G (isolate American grass

Query: 2 WVEVASP 8
W EV SP
Sbjct: 714 WAEVGSP 720




31|SequenceR|160|151|CLLGYGWVEV

>sp|CAPSD_PAVL3|CAPSID protein VP1|Parvovirus LuIII

Query: 2 LLGYGWVEV 10
LG GWVE+
Sbjct: 197 FLGDGWVEI 205


>sp|CAPSD_PAVHH|CAPSID protein VP1|Hamster parvovirus H1

Query: 2 LLGYGWVEV 10
LG GWVE+
Sbjct: 196 FLGDGWVEI 204


>sp|CAPSD_MUMIP|CAPSID protein VP1|Murine minute virus (strain MVM

Query: 2 LLGYGWVEV 10
LG GWVE+
Sbjct: 197 FLGDGWVEI 205


>sp|CAPSD_MUMIM|CAPSID protein VP1|Murine minute virus (strain MVMi)

Query: 2 LLGYGWVEV 10
LG GWVE+
Sbjct: 197 FLGDGWVEI 205


>sp|VP4_ROT18|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W+E+
Sbjct: 287 LGYKWLEI 294


>sp|VP4_ROTW3|OUTER capsid protein VP4|Rotavirus A (strain RVA/Cow/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWAEI 294


>sp|VP4_ROTBU|OUTER capsid protein VP4|Rotavirus A (strain RVA/Cow/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWAEI 294


>sp|VP4_ROTB6|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWAEI 294


>sp|VP4_ROTB4|OUTER capsid protein VP4|Rotavirus A (strain RVA/Cow/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWAEI 294


>sp|VP4_ROTSF|OUTER capsid protein VP4|Rotavirus A (strain RVA/SA11-FEM/G3P6[1]) (RV-A)

Query: 3 LGYGWVEV 10
LGY W EV
Sbjct: 287 LGYKWSEV 294


>sp|VP4_ROTS4|OUTER capsid protein VP4|Rotavirus A (strain RVA/SA11-4F/G3P6[1]) (RV-A)

Query: 3 LGYGWVEV 10
LGY W EV
Sbjct: 287 LGYKWSEV 294


>sp|VP4_ROTRF|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 LGYGWVEV 10
LGY W EV
Sbjct: 287 LGYKWSEV 294


>sp|VP4_ROTPG|OUTER capsid protein VP4|Rotavirus A (strain RVA/Pig/United

Query: 3 LGYGWVEV 10
LGY W EV
Sbjct: 286 LGYKWSEV 293


>sp|VP4_ROTBN|OUTER capsid protein VP4|Rotavirus A (strain RVA/Cow/United

Query: 3 LGYGWVEV 10
LGY W EV
Sbjct: 287 LGYKWSEV 294


>sp|VP4_ROTBC|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 LGYGWVEV 10
LGY W EV
Sbjct: 287 LGYKWSEV 294


>sp|VP4_ROTB5|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W EV
Sbjct: 287 LGYKWSEV 294


>sp|VP4_ROTAP|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Cow/South/Africa/Offal

Query: 3 LGYGWVEV 10
LGY W EV
Sbjct: 287 LGYKWSEV 294


>sp|010R_FRG3G|UNCHARACTERIZED protein 010R|Frog virus 3 (isolate Goorha)

Query: 2 LLGYGWVE 9
++GYGW +
Sbjct: 127 MVGYGWTK 134


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 2 LLGYGWVE 9
++GY W++
Sbjct: 1910 MMGYAWID 1917


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 2 LLGYGWVE 9
++GY W++
Sbjct: 1909 MMGYAWID 1916


>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTTU|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Monkey/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTSS|OUTER capsid protein VP4|Rotavirus A (strain RVA/SA11-SEM/G3P5B[2])

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTSH|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Monkey/South

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTS1|OUTER capsid protein VP4|Rotavirus A (strain RVA/SA11-Both/G3P5B[2])

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTRH|OUTER capsid protein VP4|Rotavirus A (strain RVA/Monkey/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTPY|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTP5|OUTER capsid protein VP4|Rotavirus A (strain RVA/Pig/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTP3|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTME|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTMB|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Mouse/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTF6|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTF1|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTEO|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTEL|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Equine/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTEH|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Equine/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTE1|OUTER capsid protein VP4|Rotavirus A (strain RVA/Equine/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTD9|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Dog/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTCU|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Dog/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTBK|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTBB|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Cow/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTBA|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTB9|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 283 LGYKWSEI 290


>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROT46|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 289 LGYKWSEI 296


>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|PLOD_MIMIV|PROCOLLAGEN lysyl hydroxylase and glycosyltransferase|Acanthamoeba polyphaga

Query: 4 GYGWVE 9
GYGW E
Sbjct: 462 GYGWNE 467


>sp|HEMA_CDVA6|HEMAGGLUTININ glycoprotein|Canine distemper virus (strain A92-6)

Query: 2 LLGYGWVEV 10
LLG GW+ +
Sbjct: 444 LLGSGWLTI 452


>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWPEI 293


>sp|NCAP_TAMVU|NUCLEOPROTEIN mammarenavirus (isolate Rat/United States/W

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 308 CLSGEGW 314


>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 307 CLSGEGW 313


>sp|NCAP_PARVP|NUCLEOPROTEIN mammarenavirus (isolate Rat/Paraguay/12056/1965) (PARV)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 305 CLSGEGW 311


>sp|NCAP_OLVVA|NUCLEOPROTEIN mammarenavirus (isolate Mouse/Argentina/RIID 3229/1990)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 306 CLSGEGW 312


>sp|NCAP_MOPEI|NUCLEOPROTEIN virus (MOPV)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 311 CLSGEGW 317


>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 307 CLSGEGW 313


>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 307 CLSGEGW 313


>sp|NCAP_LATVB|NUCLEOPROTEIN mammarenavirus (isolate Rat/Bolivia/MARU 1924/1965)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 305 CLSGEGW 311


>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 306 CLSGEGW 312


>sp|NCAP_CPXVB|NUCLEOPROTEIN mammarenavirus (isolate Rat/Brasil/BeAn 119303/1970)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 306 CLSGEGW 312


>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 307 CLSGEGW 313


>sp|NCAP_BCNVU|NUCLEOPROTEIN Canyon mammarenavirus (isolate Mouse/United

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 308 CLSGEGW 314


>sp|NCAP_IPPYV|NUCLEOPROTEIN mammarenavirus (isolate Rat/Central African

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 311 CLSGNGW 317


>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 4 GYGWV 8
GYGW+
Sbjct: 248 GYGWM 252


>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4 GYGWV 8
GYGW+
Sbjct: 248 GYGWM 252


>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human

Query: 1 CLLGYGWVE 9
CL+ WVE
Sbjct: 469 CLMHQDWVE 477


>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus

Query: 1 CLLGYGWVE 9
CL+ WVE
Sbjct: 469 CLMHQDWVE 477


>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human

Query: 1 CLLGYGWVE 9
CL+ WVE
Sbjct: 469 CLMHQDWVE 477


>sp|ALT_BPT4|NAD(+)--ARGININE ADP-ribosyltransferase|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 LLGYGWV 8
L+G GWV
Sbjct: 547 LVGIGWV 553


>sp|POLG_PEMVM|GENOME polyprotein|Peanut mottle virus (strain M)

Query: 2 LLGYGWVE 9
LLGYG+++
Sbjct: 1802 LLGYGFLD 1809


>sp|NCAP_WWAVU|NUCLEOPROTEIN Arroyo mammarenavirus (isolate Rat/United

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 308 CLSGDGW 314


>sp|NCAP_TACVF|NUCLEOPROTEIN virus (strain Franze-Fernandez) (TCRV)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 306 CLSGDGW 312


>sp|NCAP_PIRVV|NUCLEOPROTEIN mammarenavirus (isolate Rat/Venezuela/VAV-488/1995) (PIRV)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 306 CLSGDGW 312


>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 307 CLSGDGW 313


>sp|NCAP_MOBVC|NUCLEOPROTEIN mammarenavirus (isolate Rat/Central African

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 310 CLSGDGW 316


>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 306 CLSGDGW 312


>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 311 CLSGDGW 317


>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 311 CLSGDGW 317


>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 306 CLSGDGW 312


>sp|NCAP_ALLVP|NUCLEOPROTEIN mammarenavirus (isolate Rat/Peru/CLHP-2472/1997) (ALLV)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 307 CLSGDGW 313


>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human

Query: 1 CLLGYGWVE 9
CL+ WVE
Sbjct: 469 CLMHQDWVE 477


>sp|VEMP_IBVU5|ENVELOPE small membrane protein|Avian infectious bronchitis virus (strain

Query: 1 CLLGYGWVEV 10
CL Y WV V
Sbjct: 46 CLFWYTWVVV 55




32|SequenceR|165|156|SIVTVCLLGY

>sp|L_LBVAV|RNA-DIRECTED RNA polymerase L|Lettuce big-vein associated virus (isolate

Query: 1 SIVTVCLLGY 10
++ TVCLL Y
Sbjct: 672 TVATVCLLAY 681


>sp|TRX1_EHV2|TRIPLEX capsid protein 1|Equine herpesvirus 2 (strain 86/87)

Query: 5 VCLLGY 10
VC+LGY
Sbjct: 296 VCMLGY 301


>sp|POLS_IBDVE|STRUCTURAL polyprotein|Avian infectious bursal disease virus

Query: 4 TVCLLGY 10
T+CL+G+
Sbjct: 260 TICLIGF 266


>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)

Query: 3 VTVCLLG 9
VT CLLG
Sbjct: 93 VTFCLLG 99


>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)

Query: 3 VTVCLLG 9
VT CLLG
Sbjct: 91 VTFCLLG 97


>sp|GP16_NPVAC|GLYCOPROTEIN GP16|Autographa californica nuclear polyhedrosis virus

Query: 4 TVCLLGY 10
++CL+GY
Sbjct: 8 SICLVGY 14




33|SequenceR|170|161|LLSCLSIVTV

>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1 LLSCLSIVT 9
LLSCL++ T
Sbjct: 181 LLSCLTVPT 189




34|SequenceR|175|166|VVSAGLLSCL

>sp|HBZ_HTL1A|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1

Query: 2 VSAGLLSCL 10
VSAGL CL
Sbjct: 5 VSAGLFRCL 13


>sp|DPOL_MUHVS|DNA polymerase catalytic subunit|Murid herpesvirus 1 (strain Smith)

Query: 2 VSAGLLSCL 10
V+AG+L CL
Sbjct: 728 VAAGMLPCL 736


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 1 VVSAGLLSC 9
V++AGL++C
Sbjct: 1358 VMAAGLMAC 1366


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 3 SAGLLSC 9
SAG LSC
Sbjct: 514 SAGFLSC 520


>sp|DPOL_GPCMV|DNA polymerase|Guinea pig cytomegalovirus (strain 22122)

Query: 2 VSAGLLSCL 10
VS+G++ CL
Sbjct: 752 VSSGMMPCL 760


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 1 VVSAGLLSC 9
+++AGL++C
Sbjct: 1356 ILAAGLMAC 1364


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 1 VVSAGLLSC 9
+++AGL++C
Sbjct: 1360 ILAAGLIAC 1368




35|SequenceR|180|171|KKMFPVVSAG

>sp|GP30_BPSP1|GENE 30 protein|Bacillus phage SP01 (Bacteriophage SP01)

Query: 2 KMFPVVSA 9
K+FPVVSA
Sbjct: 100 KLFPVVSA 107


>sp|DPOL_BPPZA|DNA polymerase|Bacillus phage PZA (Bacteriophage PZA)

Query: 1 KKMFPVVSAG 10
KK+FP +S G
Sbjct: 205 KKVFPTLSLG 214


>sp|DPOL_BPPH2|DNA polymerase|Bacillus phage phi29 (Bacteriophage phi-29)

Query: 1 KKMFPVVSAG 10
KK+FP +S G
Sbjct: 208 KKVFPTLSLG 217


>sp|MCP_ELHVK|MAJOR capsid protein|Elephantid herpesvirus 1 (isolate Asian

Query: 2 KMFPVVSAG 10
K+FPV S G
Sbjct: 1098 KVFPVASFG 1106


>sp|VBET_BPP4|PROTEIN beta|Enterobacteria phage P4 (Bacteriophage P4)

Query: 1 KKMFPVVSAG 10
KK+ P++S G
Sbjct: 33 KKILPLISLG 42




36|SequenceR|185|176|RKYFTKKMFP

>sp|P3_RDVF|OUTER capsid protein P3|Rice dwarf virus (isolate Fujian)

Query: 1 RKYFTKKM 8
RKYFT+ M
Sbjct: 718 RKYFTESM 725


>sp|P3_RDVA|OUTER capsid protein P3|Rice dwarf virus (isolate Akita)

Query: 1 RKYFTKKM 8
RKYFT+ M
Sbjct: 718 RKYFTESM 725


>sp|GH_ALHV1|ENVELOPE glycoprotein H|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 KYFTKKMFP 10
+YF+K +FP
Sbjct: 256 EYFSKNLFP 264


>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 2 KYFTKK 7
KYFTKK
Sbjct: 1909 KYFTKK 1914


>sp|DPOL1_BPK31|DEPOLYMERASE 1, capsule KN3-specific|Klebsiella phage KN3-1 (Bacteriophage

Query: 2 KYFTKKMF 9
+YFT +MF
Sbjct: 293 RYFTPEMF 300


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 2 KYFTKK 7
KYFTKK
Sbjct: 1909 KYFTKK 1914


>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 1 RKYFTKKM 8
R ++TKKM
Sbjct: 2014 RNFYTKKM 2021


>sp|CP_CSVMV|PUTATIVE Polyprotein CP|Cassava vein mosaic virus (CsVMV)

Query: 1 RKYFTKKMF 9
RKYF KK +
Sbjct: 712 RKYFNKKRY 720




37|SequenceR|190|181|FYLLLRKYFT

>sp|POLG_BOVEV|GENOME polyprotein|Bovine enterovirus (strain VG-5-27) (BEV)

Query: 4 LLRKYFT 10
LLR+YFT
Sbjct: 1705 LLRRYFT 1711


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 3 LLLRKYFT 10
+LLR YFT
Sbjct: 1680 MLLRSYFT 1687


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 3 LLLRKYFT 10
+LLR YFT
Sbjct: 1687 MLLRSYFT 1694


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 3 LLLRKYFT 10
+LLR YFT
Sbjct: 1687 MLLRSYFT 1694


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 3 LLLRKYFT 10
+LLR YFT
Sbjct: 1683 MLLRSYFT 1690


>sp|POLG_BTMV|GENOME polyprotein|Beet mosaic virus (BtMV)

Query: 1 FYLLLRKY 8
FY LLR+Y
Sbjct: 1355 FYCLLREY 1362


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 FYLLLRKYFT 10
FY LRK+F+
Sbjct: 5114 FYAYLRKHFS 5123


Query: 1 FYLLLRKYFT 10
FYL L YFT
Sbjct: 3085 FYLYLTFYFT 3094


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 1 FYLLLRKYFT 10
FY LRK+F+
Sbjct: 5112 FYAYLRKHFS 5121


Query: 1 FYLLLRKYFT 10
FYL L YFT
Sbjct: 3083 FYLYLTFYFT 3092


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 1 FYLLLRKYFT 10
FY LRK+F+
Sbjct: 5108 FYAYLRKHFS 5117


Query: 1 FYLLLRKYFT 10
FYL L YFT
Sbjct: 3079 FYLYLTFYFT 3088


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 1 FYLLLRKYFT 10
FY LRK+F+
Sbjct: 5120 FYAYLRKHFS 5129


Query: 1 FYLLLRKYFT 10
FYL L YFT
Sbjct: 3091 FYLYLTFYFT 3100


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1 FYLLLRKYFT 10
FYL L YFT
Sbjct: 3085 FYLYLTFYFT 3094


>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 1 FYLLLRKYFT 10
FYL L YFT
Sbjct: 3083 FYLYLTFYFT 3092


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 FYLLLRKYFT 10
FY LRK+F+
Sbjct: 5137 FYAYLRKHFS 5146


>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 1 FYLLLRKYFT 10
FYL L YFT
Sbjct: 3079 FYLYLTFYFT 3088


>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 1 FYLLLRKYFT 10
FYL L YFT
Sbjct: 3091 FYLYLTFYFT 3100


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 4 LLRKYF 9
LLRKYF
Sbjct: 1684 LLRKYF 1689


>sp|SPANU_BPT1|U-SPANIN phage T1 (Bacteriophage T1)

Query: 1 FYLLLRKY 8
FY L+RK+
Sbjct: 121 FYFLIRKH 128


>sp|POL1_TOTV|RNA1 polyprotein|Tomato torrado virus (isolate Solanum

Query: 1 FYLLLRKYF 9
+ +L+RKYF
Sbjct: 1329 YNMLVRKYF 1337


>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus

Query: 1 FYLLLRKYF 9
+Y+++R YF
Sbjct: 274 YYIIVRVYF 282


>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1 FYLLLRKYF 9
+Y+++R YF
Sbjct: 274 YYIIVRVYF 282


>sp|NS1_JDNVP|INITIATOR protein NS1|Junonia coenia densovirus (isolate pBRJ/1990)

Query: 1 FYLLLRKY 8
F+LLL KY
Sbjct: 534 FFLLLSKY 541


>sp|POL1_CRLVP|RNA1 polyprotein|Cherry rasp leaf virus (isolate

Query: 1 FYLLLRKYF 9
+ +L+RKYF
Sbjct: 1767 YNILVRKYF 1775


>sp|PRIM_ELHVK|DNA primase|Elephantid herpesvirus 1 (isolate Asian

Query: 1 FYLLLRKYFT 10
+YLL R+Y T
Sbjct: 202 YYLLERQYST 211


>sp|NS1_DSDNV|INITIATOR protein NS1|Diatraea saccharalis densovirus (DsDNV)

Query: 1 FYLLLRKY 8
F+LLL KY
Sbjct: 534 FFLLLSKY 541




38|SequenceR|195|186|IALAIFYLLL

>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980

Query: 1 IALAIFYLLL 10
IAL+IF LL+
Sbjct: 15 IALSIFNLLI 24


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 4 AIFYLLL 10
AIFYLL+
Sbjct: 710 AIFYLLI 716




39|SequenceR|200|191|SYLTGIALAI

>sp|DPOLA_BPPM6|DNA-DIRECTED DNA polymerase|Pseudomonas phage M6

Query: 1 SYLTGIALAI 10
SY+TGI+ AI
Sbjct: 57 SYITGISFAI 66


>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)

Query: 2 YLTGIALAI 10
Y+TG ALAI
Sbjct: 125 YITGFALAI 133


>sp|PRO_JSRV|GAG-PRO polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 1 SYLTGIALA 9
SY+ GIA+A
Sbjct: 470 SYMQGIAMA 478


>sp|POL_JSRV|GAG-PRO-POL polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 1 SYLTGIALA 9
SY+ GIA+A
Sbjct: 470 SYMQGIAMA 478


>sp|GAG_JSRV|GAG polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 1 SYLTGIALA 9
SY+ GIA+A
Sbjct: 470 SYMQGIAMA 478




40|SequenceR|205|196|QFLANSYLTG

>sp|VP4_ROTF1|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 QFLANSYLTG 10
Q L+NSY+T
Sbjct: 8 QLLSNSYVTN 17


>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1 QFLANSYLTG 10
Q L+NSY+T
Sbjct: 8 QLLSNSYVTN 17


>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1 QFLANSYLTG 10
Q L+NSY+T
Sbjct: 8 QLLSNSYVTN 17


>sp|RPB1_IIV3|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 3

Query: 1 QFLANSYL 8
QFL N YL
Sbjct: 678 QFLTNHYL 685


Query: 2 FLANSYLTG 10
F+ANS++ G
Sbjct: 808 FIANSFVEG 816


>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 QFLANSYLTG 10
Q L+NSY+T
Sbjct: 8 QLLSNSYVTN 17


>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 QFLANSYLTG 10
Q L+NSY+T
Sbjct: 8 QLLSNSYVTN 17


>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United

Query: 1 QFLANSYLTG 10
Q L+NSY+T
Sbjct: 7 QLLSNSYVTN 16


>sp|VP4_ROTRA|OUTER capsid protein VP4|Rotavirus A (strain RVA/Rabbit/United

Query: 1 QFLANSYLTG 10
Q L+NSY+T
Sbjct: 8 QLLSNSYVTN 17


>sp|GM_HCMVA|ENVELOPE glycoprotein M|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 FLANSYLTG 10
FL+N Y TG
Sbjct: 290 FLSNEYRTG 298


>sp|GM_HCMVM|ENVELOPE glycoprotein M|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 FLANSYLTG 10
FL+N Y TG
Sbjct: 290 FLSNEYRTG 298




41|SequenceR|210|201|AEPILQFLAN

>sp|VIF_HV2KR|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 3 PILQFLA 9
P+LQFLA
Sbjct: 146 PLLQFLA 152




42|SequenceR|215|206|PNFGFAEPIL

>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 2 NFGFAEPIL 10
+FG+ EPIL
Sbjct: 1712 SFGYLEPIL 1720


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 2 NFGFAEPIL 10
+FG+ EPIL
Sbjct: 1712 SFGYLEPIL 1720


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 2 NFGFAEPIL 10
+FG+ EPIL
Sbjct: 1712 SFGYLEPIL 1720


>sp|YR429_MIMIV|PUTATIVE transcription factor R429|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 GFAEPIL 10
GF+EPIL
Sbjct: 242 GFSEPIL 248


>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 PNFGFAEPIL 10
P++GF P+
Sbjct: 701 PSYGFPTPVF 710


>sp|CEP1_PSHV1|CYTOPLASMIC envelopment protein 1|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 PNFGFAEPIL 10
P++G A+P++
Sbjct: 300 PHYGVAKPLM 309


>sp|VP03_SHV21|PROBABLE membrane antigen 3|Saimiriine herpesvirus 2 (strain 11)

Query: 1 PNFGFAEPIL 10
PN F EP+L
Sbjct: 50 PNASFLEPVL 59


>sp|RIR1_FRG3G|PUTATIVE ribonucleoside-diphosphate reductase large subunit|Frog virus 3

Query: 3 FGFAEPIL 10
FG++ PIL
Sbjct: 56 FGYSSPIL 63


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 2 NFGFAEPIL 10
NFGF P++
Sbjct: 2643 NFGFFNPLM 2651


>sp|POLG_FMDVT|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 PNFGFAEPIL 10
P F F PIL
Sbjct: 1068 PAFSFGAPIL 1077


>sp|POLG_FMDVS|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 PNFGFAEPIL 10
P F F PIL
Sbjct: 1068 PAFSFGAPIL 1077


>sp|UNAP_MIMIV|PROBABLE UDP-N-acetylglucosamine pyrophosphorylase|Acanthamoeba polyphaga

Query: 2 NFGFAEPI 9
NFGF+E I
Sbjct: 158 NFGFSEII 165


>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 2 NFGFAEPIL 10
NFGF P++
Sbjct: 2643 NFGFFNPLM 2651


>sp|POLG_FMDVP|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 PNFGFAEPIL 10
P F F PIL
Sbjct: 1073 PAFSFGAPIL 1082


>sp|HEMA_CVRSD|HEMAGGLUTININ-ESTERASE coronavirus (strain 681) (RCV-SDAV)

Query: 3 FGFAEPI 9
FGF EPI
Sbjct: 23 FGFNEPI 29


>sp|VF229_IIV3|UNCHARACTERIZED protein 229L|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 NFGFAEPIL 10
N+GF EP +
Sbjct: 283 NYGFVEPAI 291


>sp|POL1_TOTV|RNA1 polyprotein|Tomato torrado virus (isolate Solanum

Query: 3 FGFAEPIL 10
FGF P+L
Sbjct: 285 FGFKNPVL 292


>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 NFGFAEPI 9
NFGF E I
Sbjct: 457 NFGFGEGI 464


>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 1 PNFGFAE 7
P+FGFA+
Sbjct: 121 PHFGFAD 127


>sp|120L_IIV6|UNCHARACTERIZED protein 120L|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 NFGFAEPIL 10
NF F+ P++
Sbjct: 12 NFAFSSPVI 20




43|SequenceR|220|211|YYDELPNFGF

>sp|VP35_EBOZM|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 2 YDELPNFG 9
YD LP FG
Sbjct: 229 YDHLPGFG 236


>sp|VP35_EBOZ5|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 2 YDELPNFG 9
YD LP FG
Sbjct: 229 YDHLPGFG 236


>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 2 YDELPNFG 9
YD LP FG
Sbjct: 218 YDHLPGFG 225


>sp|VP35_EBORR|POLYMERASE cofactor VP35|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 2 YDELPNFG 9
YD LP FG
Sbjct: 218 YDHLPGFG 225


>sp|VP35_EBORE|POLYMERASE cofactor VP35|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 2 YDELPNFG 9
YD LP FG
Sbjct: 218 YDHLPGFG 225


>sp|RPOA_LDVP|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 2719 DELPNYHF 2726


>sp|1A_BMV|REPLICATION protein 1a|Brome mosaic virus (BMV)

Query: 2 YDELPNF 8
+DE+PNF
Sbjct: 154 FDEVPNF 160


>sp|POL1_BAMMN|GENOME polyprotein 1|Barley mild mosaic virus (strain

Query: 1 YYDELPNFG 9
Y+++L NFG
Sbjct: 166 YFEKLSNFG 174


>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 297 DELPNYCF 304


>sp|CAPSH_ADEP3|HEXON protein|Porcine adenovirus A serotype 3

Query: 3 DELPNFGF 10
DE+PNF F
Sbjct: 386 DEMPNFCF 393


>sp|YR771_MIMIV|PUTATIVE resolvase R771|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 YYDELPNFGF 10
Y D L FGF
Sbjct: 127 YKDRLARFGF 136


>sp|YL103_MIMIV|PUTATIVE resolvase L103|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 YYDELPNFGF 10
Y D L FGF
Sbjct: 125 YKDRLARFGF 134


>sp|DPOL_CEV01|DNA polymerase|Chrysochromulina ericina virus (CeV01)

Query: 2 YDELPNFGF 10
YDELP + +
Sbjct: 808 YDELPEYDY 816


>sp|HELI_ALHV1|DNA replication helicase|Alcelaphine herpesvirus 1 (strain C500)

Query: 4 ELPNFGF 10
++PNFG+
Sbjct: 586 QMPNFGY 592


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 1 YYDELPNFG 9
+YD P FG
Sbjct: 769 FYDGYPTFG 777


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 1 YYDELPNFG 9
+YD P FG
Sbjct: 769 FYDGYPTFG 777


>sp|ENV_JEMBR|ENVELOPE glycoprotein|Jembrana disease virus (JDV)

Query: 4 ELPNFGF 10
++PN+GF
Sbjct: 397 QVPNYGF 403


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 1 YYDELPNFG 9
+YD P FG
Sbjct: 769 FYDGYPTFG 777


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 1 YYDELPNFG 9
+YD P FG
Sbjct: 769 FYDGYPTFG 777


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 1 YYDELPNFG 9
+YD P FG
Sbjct: 769 FYDGYPTFG 777


>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 384 DELPNYCF 391


>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 408 DELPNYCF 415


>sp|DPOL_PPV01|DNA polymerase|Phaeocystis pouchetii virus (PpV01)

Query: 2 YDELPNFGF 10
YD LPN+ +
Sbjct: 825 YDNLPNYTY 833


>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 420 DELPNYCF 427


>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 376 DELPNYCF 383


>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 391 DELPNYCF 398


>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 381 DELPNYCF 388


>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 280 DELPNYCF 287


>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 397 DELPNYCF 404


>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 396 DELPNYCF 403


>sp|CAPSH_ADE01|HEXON protein|Human adenovirus C serotype 1

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 301 DELPNYCF 308


>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 401 DELPNYCF 408


>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)

Query: 3 DELPNF 8
D+LPNF
Sbjct: 2620 DDLPNF 2625


>sp|CAPSH_ADE04|HEXON protein|Human adenovirus E serotype 4

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 290 DELPNYCF 297


>sp|149L_IIV6|UNCHARACTERIZED protein 149L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 YYDELPNF 8
Y DELP F
Sbjct: 607 YADELPEF 614


>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 325 DELPNYCF 332


>sp|YR791_MIMIV|PUTATIVE ankyrin repeat protein R791|Acanthamoeba polyphaga mimivirus

Query: 1 YYDELPNFG 9
Y DEL N G
Sbjct: 59 YVDELENLG 67


>sp|L_TUPVT|RNA-DIRECTED RNA polymerase L|Tupaia virus (isolate Tupaia/Thailand/-/1986)

Query: 3 DELPNFG 9
D+LP FG
Sbjct: 799 DQLPTFG 805


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 2 YDELPNFGF 10
+DEL ++GF
Sbjct: 1011 HDELHDYGF 1019


>sp|CAPSH_ADEB3|HEXON protein|Bovine adenovirus B serotype 3

Query: 3 DELPNFGF 10
DE+PN+ F
Sbjct: 375 DEMPNYCF 382


>sp|YL484_MIMIV|PUTATIVE ankyrin repeat protein L484|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 YDELPNFG 9
YDEL N G
Sbjct: 1202 YDELTNLG 1209




44|SequenceR|225|216|ASKSVYYDEL

>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4 SVYYDEL 10
++YYDEL
Sbjct: 716 TLYYDEL 722




45|SequenceR|230|221|GGFVVASKSV

>sp|GB_GAHVR|ENVELOPE glycoprotein B|Gallid herpesvirus 2 (strain RB-1b)

Query: 1 GGFVVASKSV 10
GGF+VA + V
Sbjct: 380 GGFIVAYQPV 389


>sp|GB_GAHVM|ENVELOPE glycoprotein B|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 GGFVVASKSV 10
GGF+VA + V
Sbjct: 380 GGFIVAYQPV 389




46|SequenceR|235|226|FFLYFGGFVV

>sp|GB_GAHVR|ENVELOPE glycoprotein B|Gallid herpesvirus 2 (strain RB-1b)

Query: 1 FFLYFGGFVV 10
+FL GGF+V
Sbjct: 375 YFLALGGFIV 384


>sp|GB_GAHVM|ENVELOPE glycoprotein B|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 FFLYFGGFVV 10
+FL GGF+V
Sbjct: 375 YFLALGGFIV 384


>sp|SCAF_ELHVK|CAPSID scaffolding protein|Elephantid herpesvirus 1 (isolate Asian

Query: 3 LYFGGFVV 10
++FGGFVV
Sbjct: 48 VFFGGFVV 55


>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA

Query: 2 FLYFGGFV 9
F YFG FV
Sbjct: 2746 FKYFGSFV 2753


>sp|SCAF_HHV8P|CAPSID scaffolding protein|Human herpesvirus 8 type P

Query: 3 LYFGGFV 9
LY GGFV
Sbjct: 5 LYVGGFV 11


>sp|P4A_FOWPN|MAJOR core protein 4a precursor|Fowlpox virus (strain NVSL) (FPV)

Query: 4 YFGGFV 9
YFGG+V
Sbjct: 143 YFGGYV 148


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 FFLYFGGFVV 10
F + FGGF V
Sbjct: 2130 FLIIFGGFFV 2139


>sp|R1AB_CVPFS|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 1 FFLYFGGFV 9
FF Y GF+
Sbjct: 381 FFTYINGFI 389


>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 2 FLYFGGFVV 10
FLYF G +V
Sbjct: 389 FLYFAGQLV 397


>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 FLYFGGFVV 10
FLYF G +V
Sbjct: 389 FLYFAGQLV 397


>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 FFLYFGGFV 9
FF Y G FV
Sbjct: 2408 FFSYTGAFV 2416


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 FFLYFGGFV 9
FF Y GF+
Sbjct: 6782 FFTYLTGFI 6790


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 FFLYFGGFV 9
FF Y G FV
Sbjct: 2408 FFSYTGAFV 2416


>sp|CXCL1_HCMVM|CHEMOKINE vCXCL1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 FFLYFGG 7
+FLY GG
Sbjct: 61 YFLYLGG 67


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 1 FFLYFGGFV 9
FF Y GF+
Sbjct: 6557 FFTYINGFI 6565


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 1 FFLYFGGFV 9
FF Y GF+
Sbjct: 6532 FFTYINGFI 6540


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1 FFLYFGGFV 9
FF Y GF+
Sbjct: 6606 FFTYINGFI 6614


>sp|R1AB_CVCAI|REPLICASE polyprotein 1ab|Canine coronavirus (strain Insavc-1) (CCoV)

Query: 1 FFLYFGGFV 9
FF Y GF+
Sbjct: 16 FFTYVNGFI 24




47|SequenceR|240|231|IKETFFFLYF

>sp|MCAPS_PEMVW|MINOR capsid protein P3-RTD|Pea enation mosaic virus-1 (strain

Query: 2 KETFFFLY 9
K+ FFFLY
Sbjct: 157 KDQFFFLY 164


>sp|CAPSD_PEMVW|MAJOR capsid protein|Pea enation mosaic virus-1 (strain

Query: 2 KETFFFLY 9
K+ FFFLY
Sbjct: 157 KDQFFFLY 164


>sp|ITP_ALHV1|INNER tegument protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 4 TFFFLY 9
TFFFLY
Sbjct: 290 TFFFLY 295


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 5 FFFLYF 10
FFF YF
Sbjct: 1729 FFFFYF 1734


>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 5 FFFLYF 10
FFF YF
Sbjct: 1729 FFFFYF 1734




48|SequenceR|245|236|LLIKLIKETF

>sp|L_HIRRV|RNA-DIRECTED RNA polymerase L|Hirame rhabdovirus (strain Korea/CA 9703/1997)

Query: 1 LLIKLIKETF 10
LL+K IKE F
Sbjct: 458 LLLKFIKENF 467


>sp|L_IHNVW|RNA-DIRECTED RNA polymerase L|Infectious hematopoietic necrosis virus (strain

Query: 1 LLIKLIKETF 10
LL+K IKE F
Sbjct: 458 LLLKFIKENF 467


>sp|L_IHNVO|RNA-DIRECTED RNA polymerase L|Infectious hematopoietic necrosis virus (strain

Query: 1 LLIKLIKETF 10
LL+K IKE F
Sbjct: 458 LLLKFIKENF 467




49|SequenceR|250|241|ENKQKLLIKL

>sp|YL909_MIMIV|UNCHARACTERIZED protein L909|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 NKQKLLIK 9
NKQKL IK
Sbjct: 292 NKQKLFIK 299


>sp|L_SFTS|RNA-DIRECTED RNA polymerase L|Dabie bandavirus (Severe fever with

Query: 2 NKQKLLIKL 10
NK++LL+KL
Sbjct: 1378 NKKELLLKL 1386




50|SequenceR|255|246|HGHHHENKQK

>sp|HEMA_I72A5|HEMAGGLUTININ A virus (strain A/Shearwater/Australia/1972

Query: 1 HGHHHENKQ 9
+G+HHEN Q
Sbjct: 366 YGYHHENSQ 374


>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I54A2|HEMAGGLUTININ A virus (strain A/Malaysia:Malaya/302/1954

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I51A0|HEMAGGLUTININ A virus (strain A/USA:Albany/12/1951

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 365 YGYHHQNEQ 373


>sp|HEMA_I79A4|HEMAGGLUTININ A virus (strain A/Kiev/59/1979

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I77AA|HEMAGGLUTININ A virus (strain A/Brazil/11/1978

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I40A0|HEMAGGLUTININ A virus (strain A/Hickox/1940

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I96A3|HEMAGGLUTININ A virus (strain A/China:Nanchang/11/1996

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 365 YGYHHQNEQ 373


>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 365 YGYHHQNEQ 373


>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 365 YGYHHQNEQ 373


>sp|HEMA_I96A2|HEMAGGLUTININ A virus (strain A/USA:Memphis/10/1996

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I80AA|HEMAGGLUTININ A virus (strain A/India/6263/1980

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930

Query: 1 HGHHHENKQ 9
+G+HH+N Q
Sbjct: 366 YGYHHQNGQ 374


>sp|HEMA_I77AB|HEMAGGLUTININ A virus (strain A/USSR/90/1977

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I83A1|HEMAGGLUTININ A virus (strain A/Chile/1/1983

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|ENV_CAEVC|ENVELOPE glycoprotein|Caprine arthritis encephalitis virus (strain

Query: 2 GHHHENKQK 10
G HH+NK++
Sbjct: 925 GEHHKNKKR 933


>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 365 YGYHHQNEQ 373


>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 365 YGYHHQNEQ 373


>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 365 YGYHHQNEQ 373


>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967

Query: 1 HGHHHENKQ 9
+G+HH+N Q
Sbjct: 366 YGYHHQNGQ 374


>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961

Query: 1 HGHHHENKQ 9
+G+HH+N Q
Sbjct: 366 YGYHHQNGQ 374


>sp|HEMA_I83A4|HEMAGGLUTININ A virus (strain A/Turkey/Ireland/1378/1983

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 366 YGYHHSNEQ 374


>sp|HEMA_I83A3|HEMAGGLUTININ A virus (strain A/Duck/Ireland/113/1983

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 366 YGYHHSNEQ 374


>sp|HEPA_EHV2|DNA helicase/primase complex-associated protein|Equine herpesvirus 2

Query: 1 HGHHHENK 8
H H HE K
Sbjct: 603 HAHRHETK 610


>sp|HEMA_I61A0|HEMAGGLUTININ A virus (strain A/Tern/South

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 368 YGYHHSNEQ 376


>sp|HEMA_I87A1|HEMAGGLUTININ A virus (strain A/Mallard/Ohio/556/1987

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 364 YGYHHSNEQ 372


>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 364 YGYHHSNEQ 372


>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 368 YGYHHSNEQ 376


>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 368 YGYHHSNEQ 376


>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 368 YGYHHSNEQ 376


>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 368 YGYHHSNEQ 376


>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 368 YGYHHSNEQ 376


>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 367 YGYHHSNEQ 375


>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 368 YGYHHSNEQ 376


>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 368 YGYHHSNEQ 376


>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 368 YGYHHSNEQ 376


>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 368 YGYHHSNEQ 376


>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 366 YGYHHSNEQ 374


>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 360 YGYHHSNEQ 368


>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 357 YGYHHSNEQ 365


>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968

Query: 1 HGHHHENKQ 9
+G+HH N Q
Sbjct: 362 YGYHHSNDQ 370


>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 357 YGYHHSNEQ 365


>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New

Query: 1 HGHHHENKQ 9
+G+HH N Q
Sbjct: 362 YGYHHSNDQ 370


>sp|HEMA_I66A0|HEMAGGLUTININ A virus (strain A/Turkey/Ontario/7732/1966

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 365 YGYHHSNEQ 373


>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957

Query: 1 HGHHHENKQ 9
+G+HH N Q
Sbjct: 362 YGYHHSNDQ 370


>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957

Query: 1 HGHHHENKQ 9
+G+HH N Q
Sbjct: 362 YGYHHSNDQ 370


>sp|HEMA_I88A4|HEMAGGLUTININ A virus (strain A/Herring

Query: 1 HGHHHENKQ 9
+G+HH N Q
Sbjct: 362 YGYHHSNDQ 370


>sp|PRIM_EHV1V|DNA primase|Equine herpesvirus 1 (strain V592)

Query: 4 HHENK 8
HHENK
Sbjct: 208 HHENK 212


>sp|PRIM_EHV1B|DNA primase|Equine herpesvirus 1 (strain Ab4p)

Query: 4 HHENK 8
HHENK
Sbjct: 208 HHENK 212


>sp|GC_EHV4|ENVELOPE glycoprotein C|Equine herpesvirus 4 (strain 1942)

Query: 1 HGHHHEN 7
H H HEN
Sbjct: 82 HPHSHEN 88


>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P

Query: 3 HHHENKQK 10
H+H+NK K
Sbjct: 788 HNHKNKSK 795


>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 1 HGHHHE 6
HGH HE
Sbjct: 673 HGHPHE 678


>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 364 YGYHHSNEQ 372


>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 368 YGYHHSNEQ 376


>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 357 YGYHHSNEQ 365


>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 357 YGYHHSNEQ 365


>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 1 HGHHHE 6
HGH HE
Sbjct: 673 HGHPHE 678


>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)

Query: 1 HGHHHE 6
HGH HE
Sbjct: 673 HGHPHE 678


>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)

Query: 1 HGHHHE 6
HGH HE
Sbjct: 674 HGHPHE 679


>sp|ICP4_SUHVK|MAJOR viral transcription factor ICP4|Suid herpesvirus 1 (strain Kaplan)

Query: 3 HHHENKQ 9
HHH++++
Sbjct: 257 HHHQHRE 263


>sp|ICP4_SUHVF|MAJOR viral transcription factor ICP4|Suid herpesvirus 1 (strain

Query: 3 HHHENKQ 9
HHH++++
Sbjct: 265 HHHQHRE 271


>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)

Query: 1 HGHHHE 6
HGH HE
Sbjct: 674 HGHPHE 679


>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)

Query: 1 HGHHHE 6
HGH HE
Sbjct: 674 HGHPHE 679


>sp|V228_FOWPN|PUTATIVE ankyrin repeat protein FPV228|Fowlpox virus (strain NVSL) (FPV)

Query: 1 HGHHHE 6
HGHH++
Sbjct: 93 HGHHND 98




51|SequenceR|260|251|SAYHSHGHHH

>sp|RPOA_LDVP|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 3 YHSHGHHH 10
YH HGH H
Sbjct: 2870 YHGHGHPH 2877


>sp|RPOA_LDVC|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 3 YHSHGHHH 10
YH HGH H
Sbjct: 2891 YHGHGHPH 2898


>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 YHSHGHHH 10
YH+H H H
Sbjct: 3141 YHTHFHQH 3148


>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 YHSHGHHH 10
YH+H H H
Sbjct: 3170 YHTHFHQH 3177


>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 YHSHGHHH 10
YH+H H H
Sbjct: 3171 YHTHFHQH 3178


>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 YHSHGHHH 10
YH+H H H
Sbjct: 3171 YHTHFHQH 3178


>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 YHSHGHHH 10
+HSH H H
Sbjct: 3064 FHSHFHQH 3071


>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 YHSHGHHH 10
+HSH H H
Sbjct: 3047 FHSHFHQH 3054


>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)

Query: 3 YHSHGH 8
YH HGH
Sbjct: 228 YHGHGH 233


>sp|Y069_OSHVF|UNCHARACTERIZED protein ORF69|Ostreid herpesvirus 1 (isolate France)

Query: 1 SAYHSHGHHH 10
S YH GH++
Sbjct: 420 SLYHHKGHYY 429


>sp|EXO2_BPT5|PROBABLE exonuclease subunit 2|Escherichia phage T5 (Enterobacteria phage

Query: 5 SHGHHH 10
SHGH H
Sbjct: 588 SHGHTH 593


>sp|HEPA_EHV2|DNA helicase/primase complex-associated protein|Equine herpesvirus 2

Query: 2 AYHSHGH 8
+YH+H H
Sbjct: 601 SYHAHRH 607


>sp|POL_MMTVB|GAG-PRO-POL polyprotein|Mouse mammary tumor virus (strain

Query: 1 SAYHSHGHHH 10
SA SH HH
Sbjct: 1440 SAQESHALHH 1449


>sp|POL_MMTVC|GAG-PRO-POL polyprotein|Mouse mammary tumor virus (strain

Query: 1 SAYHSHGHHH 10
SA SH HH
Sbjct: 1440 SAQESHALHH 1449


>sp|YL016_MIMIV|UNCHARACTERIZED protein L16|Acanthamoeba polyphaga mimivirus (APMV)

Query: 6 HGHHH 10
HGH+H
Sbjct: 59 HGHNH 63


>sp|TEG5_EHV1V|TEGUMENT protein UL47 homolog|Equine herpesvirus 1 (strain V592)

Query: 1 SAYHSHG 7
S YH HG
Sbjct: 169 SEYHDHG 175


>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 5 SHGHH 9
+HGHH
Sbjct: 39 AHGHH 43


>sp|TEG5_EHV1B|TEGUMENT protein UL47 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 1 SAYHSHG 7
S YH HG
Sbjct: 169 SEYHDHG 175




52|SequenceR|265|256|SPLSESAYHS

>sp|NRAM_I66A1|NEURAMINIDASE A virus (strain A/Turkey/Wisconsin/1/1966

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I71A1|NEURAMINIDASE A virus (strain A/Memphis/1/1971

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I68A4|NEURAMINIDASE A virus (strain A/Hong

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I68A0|NEURAMINIDASE A virus (strain A/Aichi/2/1968

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I80A8|NEURAMINIDASE A virus (strain A/Turkey/Minnesota/833/1980

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I68A6|NEURAMINIDASE A virus (strain A/Northern

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I78AB|NEURAMINIDASE A virus (strain A/Swine/Kanagawa/2/1978

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I69A0|NEURAMINIDASE A virus (strain A/England/878/1969

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I68A5|NEURAMINIDASE A virus (strain A/Korea/426/1968

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I83A6|NEURAMINIDASE A virus (strain A/Chicken/Pennsylvania/1370/1983

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 246 SPLSGSAQH 254


>sp|NRAM_I83A5|NEURAMINIDASE A virus (strain A/Chicken/Pennsylvania/1/1983

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 246 SPLSGSAQH 254


>sp|NRAM_I82A7|NEURAMINIDASE A virus (strain A/Swine/Hong

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 243 SPLSGSAQH 251


>sp|NRAM_I70A0|NEURAMINIDASE A virus (strain A/Qu/7/1970

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I75A0|NEURAMINIDASE A virus (strain A/Beijing/39/1975

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I78A8|NEURAMINIDASE A virus (strain A/Memphis/18/1978

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I78A7|NEURAMINIDASE A virus (strain A/Memphis/2/1978

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I96A1|NEURAMINIDASE A virus (strain A/Niigata/137/1996

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I77A4|NEURAMINIDASE A virus (strain A/Swine/Colorado/1/1977

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I76AB|NEURAMINIDASE A virus (strain A/Swine/Hong

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I83A7|NEURAMINIDASE A virus (strain A/Chicken/Pennsylvania/8125/1983

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 246 SPLSGSAQH 254


>sp|NRAM_I76A6|NEURAMINIDASE A virus (strain A/Memphis/110/1976

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I77AH|NEURAMINIDASE A virus (strain A/Texas/1/1977

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I75A3|NEURAMINIDASE A virus (strain A/Victoria/3/1975

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274




53|SequenceR|270|261|EQDKKSPLSE

***** No hits found ******


54|SequenceR|275|266|EMVGEEQDKK

>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 MVGEEQDKK 10
M G EQDKK
Sbjct: 158 MTGLEQDKK 166


>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 EMVGEEQDK 9
E +GE QD+
Sbjct: 569 ETIGERQDR 577




55|SequenceR|280|271|GNQLKEMVGE

>sp|CAPS1_SIFVH|MAJOR capsid protein 1|Sulfolobus islandicus filamentous virus (isolate

Query: 1 GNQLKEMV 8
GNQLKE+V
Sbjct: 123 GNQLKELV 130


>sp|Y068_SIFVH|UNCHARACTERIZED protein 68|Sulfolobus islandicus filamentous virus (isolate

Query: 2 NQLKEMVGE 10
+QLKE+V E
Sbjct: 159 DQLKELVNE 167


>sp|POLG_FCV|GENOME polyprotein|Feline calicivirus (FCV)

Query: 1 GNQLKEMVG 9
GN LK +VG
Sbjct: 225 GNTLKPLVG 233


>sp|MVP_CAMVS|MOVEMENT protein|Cauliflower mosaic virus (strain Strasbourg)

Query: 2 NQLKEMVGE 10
N+LKE+ GE
Sbjct: 319 NKLKEICGE 327




56|SequenceR|285|276|MHDLDGNQLK

>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)

Query: 1 MHDLDGNQL 9
+HDL+GNQ+
Sbjct: 81 IHDLEGNQI 89


>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)

Query: 1 MHDLDGNQL 9
+HDL+GNQ+
Sbjct: 79 IHDLEGNQI 87


>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)

Query: 1 MHDLDGNQL 9
+HDL+GNQ+
Sbjct: 79 IHDLEGNQI 87


>sp|NPH2_RFVKA|RNA helicase NPH-II|Rabbit fibroma virus (strain Kasza)

Query: 1 MHDLDGNQLK 10
+HDLD N ++
Sbjct: 117 LHDLDDNAIR 126


>sp|VG05_BPP21|HEAD-TAIL preconnector protein GP5|Enterobacteria phage P21 (Bacteriophage

Query: 2 HDLDGNQLK 10
H +DGNQ +
Sbjct: 213 HKVDGNQFE 221


>sp|POXIN_VACCC|POXIN virus (strain Copenhagen) (VACV)

Query: 1 MHDLDGNQL 9
+HD +GNQ+
Sbjct: 81 IHDQEGNQI 89


>sp|POXIN_VACCA|POXIN virus (strain Ankara) (VACV)

Query: 1 MHDLDGNQL 9
+HD +GNQ+
Sbjct: 81 IHDQEGNQI 89


>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 4 LDGNQLK 10
LDG+QLK
Sbjct: 2256 LDGDQLK 2262


>sp|POLG_RTSVA|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 4 LDGNQLK 10
LDG+QLK
Sbjct: 2259 LDGDQLK 2265


>sp|RDRP_PCVC|RNA-DIRECTED RNA polymerase|Penicillium chrysogenum virus (isolate Caston/2003)

Query: 1 MHDLDGN 7
+HD DGN
Sbjct: 710 LHDRDGN 716


>sp|POXIN_VACCW|POXIN virus (strain Western Reserve)

Query: 1 MHDLDGNQL 9
+HD +GNQ+
Sbjct: 81 IHDQEGNQI 89


>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 2 HDLDGNQL 9
HD+DG L
Sbjct: 335 HDVDGKDL 342


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 2 HDLDGNQL 9
HD+DG L
Sbjct: 334 HDVDGKDL 341




57|SequenceR|290|281|CHQPIMHDLD

>sp|POL2_BRSV|RNA2 polyprotein|Beet ringspot virus (BRSV) (Tomato

Query: 1 CHQPIMHDL 9
CH PI HD+
Sbjct: 309 CHLPIEHDV 317


>sp|IKBN2_MDBVW|I-KAPPA-B like protein N2|Microplitis demolitor bracovirus (isolate Webb)

Query: 1 CHQPIMH 7
CH+P++H
Sbjct: 99 CHKPVLH 105


>sp|VP22_PSHV1|TEGUMENT protein VP22|Psittacid herpesvirus 1 (isolate Amazon

Query: 3 QPIMHDL 9
QPI HDL
Sbjct: 232 QPITHDL 238


>sp|L_MOKV|LARGE structural protein|Mokola virus (MOKV)

Query: 3 QPIMHDLD 10
+PI++DLD
Sbjct: 1687 KPILNDLD 1694


>sp|VF143_IIV3|PUTATIVE kinase protein 029R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 CHQPIMHD 8
CHQ +HD
Sbjct: 28 CHQEPLHD 35


>sp|VU4_HHV6Z|PROTEIN U4|Human herpesvirus 6B (strain Z29)

Query: 2 HQPIMHD 8
H PI+HD
Sbjct: 293 HLPILHD 299


>sp|VU4_HHV6U|PROTEIN U4|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 HQPIMHD 8
H PI+HD
Sbjct: 293 HLPILHD 299


>sp|DPOL_WMHBV|PROTEIN P|Woolly monkey hepatitis B virus

Query: 2 HQPIMHDLD 10
H P HDL+
Sbjct: 283 HSPTSHDLE 291


>sp|L_SBVBH|RNA-DIRECTED RNA polymerase L|Bovine Schmallenberg virus (isolate

Query: 1 CHQPIMHDLD 10
C +PI H +
Sbjct: 1354 CREPIQHQYE 1363




58|SequenceR|295|286|DLESSCHQPI

>sp|IKBN2_MDBVW|I-KAPPA-B like protein N2|Microplitis demolitor bracovirus (isolate Webb)

Query: 1 DLESSCHQPI 10
+L+SSCH+P+
Sbjct: 94 NLKSSCHKPV 103


>sp|CAPS4_MIMIV|PROBABLE capsid protein 4|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 LESSCHQP 9
+ S CHQP
Sbjct: 451 INSQCHQP 458


>sp|U8_HHV6U|PROTEIN U8|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 DLESSCHQPI 10
D ES C +PI
Sbjct: 274 DYESKCTRPI 283


>sp|VU8_HHV6Z|PROTEIN U8|Human herpesvirus 6B (strain Z29)

Query: 1 DLESSCHQPI 10
D ES C +PI
Sbjct: 329 DYESKCTRPI 338


>sp|TEV1_BPT4|INTRON-ASSOCIATED endonuclease 1|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 DLESSCHQPI 10
DLE CH I
Sbjct: 34 DLEKGCHSSI 43


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 DLESSCHQPI 10
D ES C +PI
Sbjct: 274 DYESKCTRPI 283


>sp|RPOA_LDVP|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 1 DLESSCHQP 9
DLE++C P
Sbjct: 2024 DLENACEDP 2032


>sp|RPOA_LDVC|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 1 DLESSCHQP 9
DLE++C P
Sbjct: 2044 DLENACEDP 2052


>sp|36016_ASFP4|PROTEIN MGF 360-16R|African swine fever virus (isolate

Query: 4 SSCHQPI 10
S CH PI
Sbjct: 18 SKCHYPI 24


>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5 SCHQPI 10
SCH PI
Sbjct: 360 SCHSPI 365


>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5 SCHQPI 10
SCH PI
Sbjct: 360 SCHSPI 365


>sp|36016_ASFWA|PROTEIN MGF 360-16R|African swine fever virus (isolate

Query: 4 SSCHQPI 10
S CH PI
Sbjct: 18 SKCHYPI 24


>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5 SCHQPI 10
SCH PI
Sbjct: 360 SCHSPI 365


>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5 SCHQPI 10
SCH PI
Sbjct: 359 SCHSPI 364


>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5 SCHQPI 10
SCH PI
Sbjct: 360 SCHSPI 365


>sp|DPOL_RHCM6|DNA polymerase catalytic subunit|Rhesus cytomegalovirus (strain 68-1)

Query: 5 SCHQPI 10
SCH P+
Sbjct: 666 SCHDPV 671


>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)

Query: 5 SCHQPI 10
SCH PI
Sbjct: 351 SCHSPI 356


>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 5 SCHQPI 10
SCH PI
Sbjct: 351 SCHSPI 356


>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5 SCHQPI 10
SCH PI
Sbjct: 359 SCHSPI 364


>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 5 SCHQPI 10
SCH PI
Sbjct: 351 SCHSPI 356


>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)

Query: 5 SCHQPI 10
SCH PI
Sbjct: 352 SCHSPI 357




59|SequenceR|300|291|MPAKGDLESS

>sp|POLG_HAVS2|GENOME polyprotein|Simian hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 775 ASGDLESS 782


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 771 AAGDLESS 778


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 771 AAGDLESS 778


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 765 AAGDLESS 772


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 771 AAGDLESS 778


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 771 AAGDLESS 778


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 771 AAGDLESS 778


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 771 AAGDLESS 778


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 771 AAGDLESS 778


>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 771 AAGDLESS 778


>sp|RPOL_BPK11|DNA-DIRECTED RNA polymerase|Enterobacteria phage K11 (Bacteriophage K11)

Query: 1 MPAKGDL 7
+PAKGDL
Sbjct: 887 VPAKGDL 893


>sp|FIBER_BPSPP|TAIL spike protein|Bacillus phage SPP1 (Bacteriophage SPP1)

Query: 1 MPAKGDLESS 10
MP+KGD +S
Sbjct: 1032 MPSKGDAYAS 1041


>sp|POLG_HAVSC|GENOME polyprotein|Simian hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 771 AGGDLESS 778


>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 275 AAGDLESS 282


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 771 ALGDLESS 778


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 771 ALGDLESS 778


>sp|POLG_HAVSJ|GENOME polyprotein|Simian hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 8 ASGDLESS 15


>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 750 ALGDLESS 757




60|SequenceR|305|296|VKEDVMPAKG

>sp|MCAPS_BYDVP|READTHROUGH protein P3-RTD|Barley yellow dwarf virus (isolate

Query: 2 KEDVMPAK 9
+EDV+P+K
Sbjct: 523 EEDVLPSK 530




61|SequenceR|310|301|LSGVIVKEDV

>sp|YL035_MIMIV|PUTATIVE BTB/POZ domain-containing protein L35|Acanthamoeba polyphaga

Query: 1 LSGVIVKEDV 10
LSG I+ EDV
Sbjct: 348 LSGCIIVEDV 357




62|SequenceR|315|306|LDQVSLSGVI

>sp|GD_PSHV1|ENVELOPE glycoprotein D|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 LDQVSLSGVI 10
LDQ S SGVI
Sbjct: 299 LDQTSASGVI 308




63|SequenceR|320|311|SQSAQLDQVS

***** No hits found ******


64|SequenceR|325|316|LWYCASQSAQ

>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)

Query: 2 WYCASQS 8
W+CA+QS
Sbjct: 48 WFCANQS 54


>sp|L_BEFVB|RNA-DIRECTED RNA polymerase L|Bovine ephemeral fever virus (strain

Query: 1 LWYCASQSAQ 10
+WY SQS++
Sbjct: 1656 VWYLTSQSSE 1665


>sp|PRO_SMRVH|GAG-PRO polyprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 1 LWYCASQS 8
LWYC++ +
Sbjct: 573 LWYCSAHA 580


>sp|POL_SMRVH|GAG-PRO-POL polyprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 1 LWYCASQS 8
LWYC++ +
Sbjct: 573 LWYCSAHA 580


>sp|GAG_SMRVH|GAG polyprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 1 LWYCASQS 8
LWYC++ +
Sbjct: 573 LWYCSAHA 580


>sp|POL2_BBWV2|RNA2 polyprotein|Broad bean wilt virus 2

Query: 1 LWYCASQS 8
+W+C+++S
Sbjct: 31 VWFCSTKS 38


>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 554 LWMCSNGSLQ 563


>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 553 LWMCSNGSLQ 562


>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 554 LWMCSNGSLQ 563


>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 554 LWMCSNGSLQ 563


>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 554 LWMCSNGSLQ 563


>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 554 LWMCSNGSLQ 563


>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 554 LWMCSNGSLQ 563


>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 554 LWMCSNGSLQ 563


>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 543 LWMCSNGSLQ 552


>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 554 LWMCSNGSLQ 563


>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 543 LWMCSNGSLQ 552


>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 554 LWMCSNGSLQ 563


>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 543 LWMCSNGSLQ 552




65|SequenceR|330|321|YRVGKLWYCA

>sp|L_EBLV2|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 2 (strain

Query: 2 RVGKLWYCA 10
RVG++W C+
Sbjct: 1086 RVGRVWNCS 1094


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 2 RVGKLWYCA 10
RVG++W C+
Sbjct: 1086 RVGRVWPCS 1094


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 2 RVGKLWYCA 10
RVG++W C+
Sbjct: 1086 RVGRVWPCS 1094


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 2 RVGKLWYCA 10
RVG++W C+
Sbjct: 1086 RVGRVWPCS 1094


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 2 RVGKLWYCA 10
RVG++W C+
Sbjct: 1086 RVGRVWPCS 1094


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 2 RVGKLWYCA 10
RVG++W C+
Sbjct: 1086 RVGRVWPCS 1094


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)

Query: 2 RVGKLWYCA 10
RVG++W C+
Sbjct: 1087 RVGRVWPCS 1095


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 2 RVGKLWYCA 10
RVG++W C+
Sbjct: 1086 RVGRVWPCS 1094


>sp|L_EBLV1|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 1 (strain

Query: 2 RVGKLWYCA 10
R+G++W C+
Sbjct: 1086 RIGRVWSCS 1094


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)

Query: 2 RVGKLWYCA 10
R+G++W C+
Sbjct: 1086 RIGRVWSCS 1094


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 2 RVGKLWYCA 10
R+G++W C+
Sbjct: 1087 RIGRVWSCS 1095


>sp|L_MOKV|LARGE structural protein|Mokola virus (MOKV)

Query: 2 RVGKLWYCA 10
R+G++W C+
Sbjct: 1086 RLGRVWTCS 1094


>sp|POLG_FMDVZ|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 RVGKLWYC 9
R+ +WYC
Sbjct: 1242 RIDSVWYC 1249


>sp|POLG_FMDVO|GENOME polyprotein|Foot-and-mouth disease virus serotype O

Query: 2 RVGKLWYC 9
R+ +WYC
Sbjct: 1241 RIDSVWYC 1248


>sp|POLG_FMDV1|GENOME polyprotein|Foot-and-mouth disease virus (strain A10/Holland/1961

Query: 2 RVGKLWYC 9
R+ +WYC
Sbjct: 1241 RIDSVWYC 1248


>sp|POLG_FMDA1|GENOME polyprotein|Foot-and-mouth disease virus serotype Asia-1

Query: 2 RVGKLWYC 9
R+ +WYC
Sbjct: 1238 RIDSVWYC 1245


>sp|YR118_MIMIV|UNCHARACTERIZED protein R118|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 RVGKLW 7
RVGKLW
Sbjct: 202 RVGKLW 207


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 2 RVGKLWYCA 10
RVG +W C+
Sbjct: 1086 RVGGVWPCS 1094


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 2 RVGKLWYCA 10
RVG +W C+
Sbjct: 1086 RVGGVWPCS 1094


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 2 RVGKLWYCA 10
RVG +W C+
Sbjct: 1086 RVGGVWPCS 1094


>sp|YR818_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R818|Acanthamoeba

Query: 3 VGKLWYCA 10
+GK+WY A
Sbjct: 123 LGKIWYGA 130


>sp|PRO_SMRVH|GAG-PRO polyprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 6 LWYCA 10
LWYC+
Sbjct: 573 LWYCS 577


>sp|POL_SMRVH|GAG-PRO-POL polyprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 6 LWYCA 10
LWYC+
Sbjct: 573 LWYCS 577


>sp|GAG_SMRVH|GAG polyprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 6 LWYCA 10
LWYC+
Sbjct: 573 LWYCS 577


>sp|YR355_MIMIV|PUTATIVE thiol protease R355|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 GKLWYC 9
GKL+YC
Sbjct: 193 GKLYYC 198


>sp|POLG_FMDVT|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 RVGKLWYC 9
R +WYC
Sbjct: 1236 RTDSVWYC 1243


>sp|POLG_FMDVS|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 RVGKLWYC 9
R +WYC
Sbjct: 1236 RTDSVWYC 1243


>sp|POLG_FMDVP|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 RVGKLWYC 9
R +WYC
Sbjct: 1241 RTDSVWYC 1248


>sp|POLG_FMDVI|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 RVGKLWYC 9
R +WYC
Sbjct: 1237 RTDSVWYC 1244


>sp|POLG_FMDVC|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 RVGKLWYC 9
R +WYC
Sbjct: 1242 RTDSVWYC 1249


>sp|POLG_FMDVA|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 RVGKLWYC 9
R +WYC
Sbjct: 1242 RTDSVWYC 1249


>sp|POLG_FMDV5|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 RVGKLWYC 9
R +WYC
Sbjct: 1241 RTDSVWYC 1248


>sp|POLG_FMDS2|GENOME polyprotein|Foot-and-mouth disease virus serotype SAT-2

Query: 2 RVGKLWYC 9
R +WYC
Sbjct: 1245 RTDSVWYC 1252


>sp|YL232_MIMIV|PUTATIVE serine/threonine-protein kinase L232|Acanthamoeba polyphaga

Query: 1 YRVGKLWYC 9
Y +GK+ YC
Sbjct: 433 YSMGKIIYC 441


>sp|P8_RDVF|OUTER capsid protein P8|Rice dwarf virus (isolate Fujian)

Query: 1 YRVGKLWY 8
Y +GK W+
Sbjct: 80 YMLGKTWF 87




66|SequenceR|335|326|TGIDSYRVGK

>sp|Y710_ATV|PUTATIVE transmembrane protein ORF710|Acidianus two-tailed virus (ATV)

Query: 1 TGIDSYRV 8
TGIDSY +
Sbjct: 306 TGIDSYSI 313


>sp|VG27_ICHVA|UNCHARACTERIZED protein ORF27|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 TGIDSYRVG 9
TG D+ RVG
Sbjct: 95 TGCDTLRVG 103


>sp|L_TAMVU|RNA-DIRECTED RNA polymerase L|Tamiami mammarenavirus (isolate Rat/United

Query: 2 GIDSYRVGK 10
G D Y+VGK
Sbjct: 562 GPDVYKVGK 570


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2 GIDSYRVG 9
G+D +R+G
Sbjct: 461 GLDDFRIG 468


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2 GIDSYRVG 9
G+D +R+G
Sbjct: 461 GLDDFRIG 468




67|SequenceR|340|331|IMWALTGIDS

>sp|Y071_OSHVF|UNCHARACTERIZED protein ORF71|Ostreid herpesvirus 1 (isolate France)

Query: 1 IMWALTG 7
IMW LTG
Sbjct: 309 IMWELTG 315


>sp|VP4_BTV2A|CORE protein VP4|Bluetongue virus 2 (isolate USA)

Query: 2 MWALTGIDS 10
+W LTG++S
Sbjct: 25 IWRLTGVES 33


>sp|VL1_BPV3|MAJOR capsid protein L1|Bovine papillomavirus type 3

Query: 1 IMWALTGID 9
++WAL GI+
Sbjct: 97 LVWALRGIE 105


>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 MWALTGIDS 10
MWA TG+ S
Sbjct: 362 MWAGTGVMS 370


>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 MWALTGIDS 10
MWA TG+ S
Sbjct: 362 MWAGTGVMS 370


>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54

Query: 1 IMWALTGID 9
++WA TG++
Sbjct: 95 LVWACTGVE 103


>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35

Query: 1 IMWALTGID 9
++WA TG++
Sbjct: 98 LVWACTGVE 106


>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29

Query: 1 IMWALTGID 9
++WA TG++
Sbjct: 98 LVWACTGVE 106


>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28

Query: 1 IMWALTGID 9
++WA TG++
Sbjct: 98 LVWACTGVE 106


>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10

Query: 1 IMWALTGID 9
++WA TG++
Sbjct: 126 LVWACTGVE 134


>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3

Query: 1 IMWALTGID 9
++WA TG++
Sbjct: 126 LVWACTGVE 134


>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b

Query: 1 IMWALTGID 9
++WA TG++
Sbjct: 95 LVWACTGLE 103


>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a

Query: 1 IMWALTGID 9
++WA TG++
Sbjct: 95 LVWACTGLE 103


>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52

Query: 1 IMWALTGID 9
++WA TG++
Sbjct: 127 LVWACTGLE 135


>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13

Query: 1 IMWALTGID 9
++WA TG++
Sbjct: 95 LVWACTGLE 103


>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11

Query: 1 IMWALTGID 9
++WA TG++
Sbjct: 95 LVWACTGLE 103




68|SequenceR|345|336|GDSLTIMWAL

>sp|UL4_GAHVM|NUCLEAR protein UL4 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 GDSLTIMW 8
G LTIMW
Sbjct: 121 GGVLTIMW 128


>sp|CAPSD_BPPP4|MAJOR capsid protein|Pseudomonas phage PaMx41

Query: 1 GDSLTIMWAL 10
G SLT WAL
Sbjct: 381 GGSLTSEWAL 390


>sp|POL_BPNNR|DNA Primase-polymerase|Nitratiruptor phage NrS-1

Query: 1 GDSLTIMW 8
GDS TI W
Sbjct: 681 GDSKTITW 688


>sp|SPIKE_ADE31|FIBER protein|Human adenovirus A serotype 31

Query: 1 GDSLTIMW 8
G SLT MW
Sbjct: 525 GYSLTFMW 532


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1 GDSLTIMWAL 10
G SLT +W L
Sbjct: 2488 GHSLTWLWLL 2497


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1 GDSLTIMWAL 10
G SLT +W L
Sbjct: 2488 GHSLTWLWLL 2497


>sp|VP22_BPAPS|PUTATIVE protein p22|Acyrthosiphon pisum secondary endosymbiont phage

Query: 1 GDSLTIMWAL 10
GD T W L
Sbjct: 53 GDGFTCQWVL 62


>sp|YR787_MIMIV|PUTATIVE ankyrin repeat protein R787|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 DSLTIMWAL 10
++LT++WA+
Sbjct: 186 NNLTLVWAI 194




69|SequenceR|350|341|IFNHLGDSLT

>sp|Y114_NPVOP|UNCHARACTERIZED 48.2 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 2 FNHLGDSL 9
FNHLGD L
Sbjct: 35 FNHLGDRL 42


>sp|VP5_AQRVG|MICROTUBULE-ASSOCIATED protein VP5|Aquareovirus G (isolate American grass

Query: 3 NHLGDSL 9
+HLGDSL
Sbjct: 440 DHLGDSL 446


>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)

Query: 1 IFNHLGDSL 9
I NH+GD L
Sbjct: 656 ISNHMGDEL 664


>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 IFNHLGDSL 9
I NH+GD L
Sbjct: 656 ISNHMGDEL 664


>sp|RNC_FRG3G|PUTATIVE ribonuclease 3|Frog virus 3 (isolate Goorha)

Query: 1 IFNHLGDS 8
++NH GD+
Sbjct: 192 VYNHRGDT 199


>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)

Query: 1 IFNHLGDSL 9
+FN GDSL
Sbjct: 654 LFNQHGDSL 662


>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 1 IFNHLGDSL 9
+FN GDSL
Sbjct: 654 LFNQHGDSL 662


>sp|PKG9_BPPRD|DNA packaging ATPase P9|Enterobacteria phage PRD1 (Bacteriophage

Query: 1 IFNHLGDSL 9
+ NH GD L
Sbjct: 42 VLNHKGDDL 50




70|SequenceR|355|346|IALGDIFNHL

>sp|HBEAG_HPBDW|EXTERNAL core antigen|Duck hepatitis B virus (isolate

Query: 1 IALGDIFNH 9
I LGD+F H
Sbjct: 142 IPLGDLFKH 150


>sp|HBEAG_HPBDC|EXTERNAL core antigen|Duck hepatitis B virus (strain

Query: 1 IALGDIFNH 9
I LGD+F H
Sbjct: 142 IPLGDLFKH 150


>sp|HBEAG_HPBDB|EXTERNAL core antigen|Duck hepatitis B virus (isolate

Query: 1 IALGDIFNH 9
I LGD+F H
Sbjct: 142 IPLGDLFKH 150


>sp|HBEAG_DHBVQ|EXTERNAL core antigen|Duck hepatitis B virus (isolate

Query: 1 IALGDIFNH 9
I LGD+F H
Sbjct: 142 IPLGDLFKH 150


>sp|HBEAG_DHBV3|EXTERNAL core antigen|Duck hepatitis B virus (strain

Query: 1 IALGDIFNH 9
I LGD+F H
Sbjct: 142 IPLGDLFKH 150


>sp|HBEAG_DHBV1|EXTERNAL core antigen|Duck hepatitis B virus (strain

Query: 1 IALGDIFNH 9
I LGD+F H
Sbjct: 142 IPLGDLFKH 150


>sp|CAPSD_HPBDW|CAPSID protein|Duck hepatitis B virus (isolate

Query: 1 IALGDIFNH 9
I LGD+F H
Sbjct: 99 IPLGDLFKH 107


>sp|CAPSD_HPBDC|CAPSID protein|Duck hepatitis B virus (strain

Query: 1 IALGDIFNH 9
I LGD+F H
Sbjct: 99 IPLGDLFKH 107


>sp|CAPSD_HPBDB|CAPSID protein|Duck hepatitis B virus (isolate

Query: 1 IALGDIFNH 9
I LGD+F H
Sbjct: 99 IPLGDLFKH 107


>sp|CAPSD_DHBVQ|CAPSID protein|Duck hepatitis B virus (isolate

Query: 1 IALGDIFNH 9
I LGD+F H
Sbjct: 99 IPLGDLFKH 107


>sp|CAPSD_DHBV3|CAPSID protein|Duck hepatitis B virus (strain

Query: 1 IALGDIFNH 9
I LGD+F H
Sbjct: 99 IPLGDLFKH 107


>sp|CAPSD_DHBV1|CAPSID protein|Duck hepatitis B virus (strain

Query: 1 IALGDIFNH 9
I LGD+F H
Sbjct: 99 IPLGDLFKH 107


>sp|MCEL_VACCW|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Western Reserve)

Query: 1 IALGDIFN 8
I +GDIFN
Sbjct: 523 IKIGDIFN 530


>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)

Query: 1 IALGDIFN 8
I +GDIFN
Sbjct: 523 IKIGDIFN 530


>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 IALGDIFN 8
I +GDIFN
Sbjct: 523 IKIGDIFN 530


>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 1 IALGDIFN 8
I +GDIFN
Sbjct: 523 IKIGDIFN 530


>sp|MCEL_CAMPS|MRNA-CAPPING enzyme catalytic subunit|Camelpox virus (strain CMS)

Query: 1 IALGDIFN 8
I +GDIFN
Sbjct: 523 IKIGDIFN 530


>sp|MCEL_CAMPM|MRNA-CAPPING enzyme catalytic subunit|Camelpox virus (strain M-96)

Query: 1 IALGDIFN 8
I +GDIFN
Sbjct: 523 IKIGDIFN 530


>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12

Query: 1 IALGDIFNH 9
+ L DIFNH
Sbjct: 372 LLLKDIFNH 380


>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 IALGDIFNHL 10
+A DIF HL
Sbjct: 727 VAYTDIFTHL 736


>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 IALGDIFNHL 10
+A DIF HL
Sbjct: 727 VAYTDIFTHL 736


>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 IALGDIFNHL 10
+A DIF HL
Sbjct: 727 VAYTDIFTHL 736


>sp|RDRP_RBDVR|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Raspberry bushy dwarf virus (isolate

Query: 3 LGDIFN 8
LGDIFN
Sbjct: 1561 LGDIFN 1566


>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)

Query: 1 IALGDIFN 8
I +GD+FN
Sbjct: 523 IKIGDVFN 530


>sp|MCEL_VAR67|MRNA-CAPPING enzyme catalytic subunit|Variola virus (isolate

Query: 1 IALGDIFN 8
I +GD+FN
Sbjct: 523 IKIGDVFN 530


>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus

Query: 1 IALGDIFN 8
I +GD+FN
Sbjct: 523 IKIGDVFN 530


>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)

Query: 1 IALGDIFN 8
I +GD+FN
Sbjct: 523 IKIGDVFN 530


>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /

Query: 1 IALGDIFN 8
I +GD+FN
Sbjct: 523 IKIGDVFN 530


>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988

Query: 2 ALGDIFNHL 10
A+G FNHL
Sbjct: 409 AVGKEFNHL 417


>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New

Query: 2 ALGDIFNHL 10
A+G FNHL
Sbjct: 409 AVGKEFNHL 417


>sp|DPOL_IIV6|DNA polymerase 037L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 IALGDIFNHL 10
+ + DIF HL
Sbjct: 545 VLVADIFEHL 554




71|SequenceR|360|351|TFSAGIALGD

***** No hits found ******


72|SequenceR|365|356|QFVSVTFSAG

>sp|NRDD_BPT4|ANAEROBIC ribonucleoside-triphosphate reductase|Enterobacteria phage T4

Query: 2 FVSVTFSAG 10
FV++TF G
Sbjct: 194 FVTITFGTG 202


>sp|CAPSH_ADEP3|HEXON protein|Porcine adenovirus A serotype 3

Query: 2 FVSVTFSAG 10
FVS F+AG
Sbjct: 814 FVSAAFTAG 822


>sp|CAPSD_BPLC2|MAJOR capsid protein|Lactococcus phage c2

Query: 2 FVSVTFSAG 10
F+S TF AG
Sbjct: 255 FISGTFKAG 263




73|SequenceR|370|361|STSIGQFVSV

***** No hits found ******


74|SequenceR|375|366|CLIAVSTSIG

>sp|VF203_IIV6|UNCHARACTERIZED protein 203L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 CLIAVSTS 8
CLI +STS
Sbjct: 127 CLIPISTS 134


>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)

Query: 1 CLIAVSTSIG 10
CLI +TSI
Sbjct: 109 CLITATTSIA 118




75|SequenceR|380|371|HPFEECLIAV

>sp|ENV_RSVP|ENVELOPE glycoprotein gp95|Rous sarcoma virus subgroup C

Query: 2 PFEECLIAV 10
PF+ CLI +
Sbjct: 96 PFQTCLIGI 104


>sp|ENV_ALVA|ENVELOPE glycoprotein gp95|Avian leukosis virus subgroup A

Query: 2 PFEECLIAV 10
PF+ CLI +
Sbjct: 96 PFQTCLIGI 104


>sp|ENV_RSVSB|ENVELOPE glycoprotein gp95|Rous sarcoma virus subgroup B

Query: 2 PFEECLIAV 10
PF+ CLI +
Sbjct: 96 PFQTCLIGI 104


>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare

Query: 1 HPFEEC 6
HPF EC
Sbjct: 259 HPFTEC 264


>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse

Query: 1 HPFEEC 6
HPF EC
Sbjct: 259 HPFTEC 264


>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United

Query: 1 HPFEEC 6
HPF EC
Sbjct: 259 HPFTEC 264


>sp|NEC2_GAHVM|NUCLEAR egress protein 2|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 2 PFEECLI 8
PF+ CLI
Sbjct: 143 PFQACLI 149


>sp|1A_TOBSV|REPLICATION protein 1a|Tobacco streak virus (strain WC)

Query: 1 HPFEEC 6
H FEEC
Sbjct: 180 HKFEEC 185


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 2 PFEECLIA 9
PFE C++
Sbjct: 2013 PFEHCILG 2020


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 2 PFEECLIA 9
PFE C++
Sbjct: 2012 PFEHCILG 2019


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 2 PFEECLIA 9
PFE C++
Sbjct: 2012 PFEHCILG 2019


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)

Query: 2 PFEECLIA 9
PFE C++
Sbjct: 2012 PFEHCILG 2019


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 2 PFEECLIA 9
PFE C++
Sbjct: 2010 PFEHCILG 2017


>sp|PAP1_LSDV|POLY(A) polymerase catalytic subunit|Lumpy skin disease virus (LSDV)

Query: 2 PFEECLI 8
PF++CL+
Sbjct: 348 PFKKCLV 354


>sp|DPOL_BPT5|DNA polymerase|Escherichia phage T5 (Enterobacteria phage

Query: 2 PFEECLIA 9
PF EC +A
Sbjct: 625 PFVECTVA 632


>sp|A132_SSV1|UNCHARACTERIZED protein A-132|Sulfolobus spindle-shape virus 1 (SSV1)

Query: 3 FEECLIAV 10
+EEC+I V
Sbjct: 36 YEECIIIV 43


>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 PFEECLIAV 10
PF C IAV
Sbjct: 644 PFPACTIAV 652


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 HPFEECLI 8
HP +CL+
Sbjct: 750 HPSSDCLV 757




76|SequenceR|385|376|FDGLEHPFEE

>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1 FDGLEHPFEE 10
+ GLEHP +E
Sbjct: 337 YGGLEHPIDE 346


>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1 FDGLEHPFEE 10
+ GLEHP E
Sbjct: 337 YGGLEHPINE 346


>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1 FDGLEHPFEE 10
+ GLEHP E
Sbjct: 337 YGGLEHPINE 346


>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1 FDGLEHPFEE 10
+ GLEHP E
Sbjct: 337 YGGLEHPINE 346


>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1 FDGLEHPFEE 10
+ GLEHP E
Sbjct: 337 YGGLEHPINE 346


>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1 FDGLEHPFEE 10
+ GLEHP E
Sbjct: 337 YGGLEHPINE 346


>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1 FDGLEHPFEE 10
+ GLEHP E
Sbjct: 337 YGGLEHPINE 346


>sp|REP_BPM13|REPLICATION-ASSOCIATED protein G2P|Enterobacteria phage M13 (Bacteriophage M13)

Query: 3 GLEHPFE 9
GL HPFE
Sbjct: 59 GLSHPFE 65


>sp|REP_BPFD|REPLICATION-ASSOCIATED protein G2P|Enterobacteria phage fd (Bacteriophage fd)

Query: 3 GLEHPFE 9
GL HPFE
Sbjct: 59 GLSHPFE 65


>sp|REP_BPF1|REPLICATION-ASSOCIATED protein G2P|Enterobacteria phage f1 (Bacteriophage f1)

Query: 3 GLEHPFE 9
GL HPFE
Sbjct: 59 GLSHPFE 65


>sp|CAPSD_WCMVO|COAT protein|White clover mosaic virus (strain

Query: 1 FDGLEHP 7
FDG+ HP
Sbjct: 140 FDGVNHP 146


>sp|CAPSD_WCMVM|COAT protein|White clover mosaic virus (strain

Query: 1 FDGLEHP 7
FDG+ HP
Sbjct: 140 FDGVNHP 146


>sp|REP_BPIKE|REPLICATION-ASSOCIATED protein G2P|Salmonella phage IKe (Bacteriophage IKe)

Query: 3 GLEHPFE 9
GL+HP+E
Sbjct: 60 GLKHPYE 66


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 2 DGLEHPFEE 10
D +E PFEE
Sbjct: 1023 DIIEQPFEE 1031


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 2 DGLEHPFEE 10
D +E PFEE
Sbjct: 1023 DIIEQPFEE 1031


>sp|AN_VZVD|ALKALINE nuclease|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3 GLEHPF 8
GL+HPF
Sbjct: 24 GLQHPF 29


>sp|AN_VZVO|ALKALINE nuclease|Varicella-zoster virus (strain Oka vaccine)

Query: 3 GLEHPF 8
GL+HPF
Sbjct: 24 GLQHPF 29


>sp|PG165_VACCW|PROTEIN OPG165|Vaccinia virus (strain Western Reserve)

Query: 4 LEHPFE 9
LEHPF+
Sbjct: 223 LEHPFD 228


>sp|PG165_VACCC|PROTEIN OPG165|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4 LEHPFE 9
LEHPF+
Sbjct: 223 LEHPFD 228


>sp|PG165_MONPV|PROTEIN OPG165|Monkeypox virus (MPXV)

Query: 4 LEHPFE 9
LEHPF+
Sbjct: 228 LEHPFD 233


>sp|CAPSD_PMV|COAT protein|Papaya mosaic potexvirus (PMV)

Query: 1 FDGLEHP 7
FDG+E+P
Sbjct: 144 FDGVENP 150


>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)

Query: 3 GLEHPF 8
GLEHPF
Sbjct: 286 GLEHPF 291


>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 3 GLEHPF 8
GLEHPF
Sbjct: 286 GLEHPF 291


>sp|POLG_PYFV1|GENOME polyprotein|Parsnip yellow fleck virus (isolate

Query: 1 FDGLEHP 7
FDG+ HP
Sbjct: 2526 FDGMFHP 2532


>sp|RIR1_SUHVK|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Suid herpesvirus 1 (strain Kaplan)

Query: 1 FDGLEH 6
FDG EH
Sbjct: 615 FDGFEH 620


>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 3 GLEHPF 8
GLEHPF
Sbjct: 286 GLEHPF 291


>sp|VP48_NPVOP|P48 protein|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 3 GLEHPFE 9
GLEH FE
Sbjct: 17 GLEHRFE 23


>sp|YR481_MIMIV|UNCHARACTERIZED protein R481|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 FDGLEHPFE 9
FDG H F+
Sbjct: 879 FDGQNHSFD 887




77|SequenceR|390|381|NLLIVFDGLE

>sp|KTHY_VACCW|THYMIDYLATE kinase|Vaccinia virus (strain Western Reserve)

Query: 3 LIVFDGLE 10
LIVF+GL+
Sbjct: 6 LIVFEGLD 13


>sp|KTHY_VACCT|THYMIDYLATE kinase|Vaccinia virus (strain Tian Tan)

Query: 3 LIVFDGLE 10
LIVF+GL+
Sbjct: 6 LIVFEGLD 13


>sp|KTHY_VACCC|THYMIDYLATE kinase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 LIVFDGLE 10
LIVF+GL+
Sbjct: 6 LIVFEGLD 13


>sp|KTHY_VACCA|THYMIDYLATE kinase|Vaccinia virus (strain Ankara) (VACV)

Query: 3 LIVFDGLE 10
LIVF+GL+
Sbjct: 6 LIVFEGLD 13


>sp|KTHY_RABPU|THYMIDYLATE kinase|Rabbitpox virus (strain Utrecht) (RPV)

Query: 3 LIVFDGLE 10
LIVF+GL+
Sbjct: 6 LIVFEGLD 13


>sp|KTHY_ECTVM|THYMIDYLATE kinase|Ectromelia virus (strain Moscow) (ECTV)

Query: 3 LIVFDGLE 10
LIVF+GL+
Sbjct: 6 LIVFEGLD 13


>sp|KTHY_CWPXB|THYMIDYLATE kinase|Cowpox virus (strain Brighton Red)

Query: 3 LIVFDGLE 10
LIVF+GL+
Sbjct: 6 LIVFEGLD 13


>sp|KTHY_VARV|THYMIDYLATE kinase|Variola virus

Query: 3 LIVFDGLE 10
LIVF+GL+
Sbjct: 6 LIVFEGLD 13


>sp|KTHY_VAR67|THYMIDYLATE kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3 LIVFDGLE 10
LIVF+GL+
Sbjct: 6 LIVFEGLD 13


>sp|KTHY_MONPV|THYMIDYLATE kinase|Monkeypox virus (MPXV)

Query: 3 LIVFDGLE 10
LIVF+GL+
Sbjct: 6 LIVFEGLD 13


>sp|KTHY_CWPXG|THYMIDYLATE kinase|Cowpox virus (strain GRI-90 /

Query: 3 LIVFDGLE 10
LIVF+GL+
Sbjct: 6 LIVFEGLD 13


>sp|VG16_BPP1|GENE 16 protein|Escherichia phage P1 (Bacteriophage P1)

Query: 2 LLIVFDGL 9
L IVFDGL
Sbjct: 82 LHIVFDGL 89


>sp|KTHY_CAMPS|THYMIDYLATE kinase|Camelpox virus (strain CMS)

Query: 3 LIVFDGLE 10
LIVF+GL+
Sbjct: 6 LIVFEGLD 13


>sp|KTHY_CAMPM|THYMIDYLATE kinase|Camelpox virus (strain M-96)

Query: 3 LIVFDGLE 10
LIVF+GL+
Sbjct: 6 LIVFEGLD 13




78|SequenceR|395|386|ISMGANLLIV

>sp|Y749_MIMIV|PUTATIVE homeobox protein R749|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 ISMGANLLI 9
I MGANLL+
Sbjct: 18 IIMGANLLV 26




79|SequenceR|400|391|FLAQQISMGA

***** No hits found ******


80|SequenceR|405|396|SLFNFFLAQQ

***** No hits found ******


81|SequenceR|410|401|YCCCASLFNF

>sp|KFMS_FSVMD|TYROSINE-PROTEIN kinase transforming protein fms|Feline sarcoma virus (strain

Query: 1 YCCCASLFNF 10
YCC L NF
Sbjct: 696 YCCYGDLLNF 705


>sp|KIT_FSVHZ|TYROSINE-PROTEIN kinase transforming protein kit|Feline sarcoma virus (strain

Query: 1 YCCCASLFNF 10
YCC L NF
Sbjct: 110 YCCYGDLLNF 119


>sp|RDRP_TOBSV|RNA-DIRECTED RNA polymerase 2a|Tobacco streak virus (strain WC)

Query: 4 CASLFNF 10
C SLFNF
Sbjct: 578 CVSLFNF 584


>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC +SLFN
Sbjct: 380 YCNTSSLFN 388


>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFNF 10
YC A +FN+
Sbjct: 382 YCNTAKMFNY 391


>sp|VF717_ASFWA|UNCHARACTERIZED protein C717R|African swine fever virus (isolate

Query: 2 CCCAS 6
CCCA+
Sbjct: 94 CCCAT 98


>sp|VF717_ASFP4|UNCHARACTERIZED protein C717R|African swine fever virus (isolate

Query: 2 CCCAS 6
CCCA+
Sbjct: 94 CCCAT 98


>sp|VF717_ASFB7|UNCHARACTERIZED protein C717R|African swine fever virus (strain

Query: 2 CCCAS 6
CCCA+
Sbjct: 94 CCCAT 98


>sp|VF717_ASFK5|UNCHARACTERIZED protein C717R|African swine fever virus (isolate

Query: 2 CCCAS 6
CCCA+
Sbjct: 94 CCCAT 98


>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC A LFN
Sbjct: 384 YCNTAQLFN 392


>sp|VF717_ASFM2|UNCHARACTERIZED protein C717R|African swine fever virus (isolate

Query: 2 CCCAS 6
CCCA+
Sbjct: 94 CCCAT 98


>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 2 CCCAS 6
CCCA+
Sbjct: 670 CCCAA 674


>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 2 CCCAS 6
CCCA+
Sbjct: 670 CCCAA 674


>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)

Query: 2 CCCASL 7
CCC SL
Sbjct: 796 CCCKSL 801


>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)

Query: 2 CCCA 5
CCCA
Sbjct: 469 CCCA 472


>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)

Query: 2 CCCA 5
CCCA
Sbjct: 469 CCCA 472


>sp|PG141_MONPV|VIRION membrane protein OPG141|Monkeypox virus (MPXV)

Query: 3 CCASLFNF 10
CC LFNF
Sbjct: 15 CCVLLFNF 22


>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)

Query: 2 CCCA 5
CCCA
Sbjct: 471 CCCA 474


>sp|PG141_VAR67|VIRION membrane protein OPG141|Variola virus (isolate

Query: 3 CCASLFNF 10
CC LFNF
Sbjct: 15 CCVLLFNF 22


>sp|PG141_VACCW|VIRION membrane protein OPG141|Vaccinia virus (strain Western Reserve)

Query: 3 CCASLFNF 10
CC LFNF
Sbjct: 15 CCVLLFNF 22


>sp|PG141_VACCC|VIRION membrane protein OPG141|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 CCASLFNF 10
CC LFNF
Sbjct: 15 CCVLLFNF 22


>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 CCCASL 7
CCC S+
Sbjct: 130 CCCGSV 135


>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 CCCASL 7
CCC S+
Sbjct: 130 CCCGSV 135




82|SequenceR|415|406|FALGLYCCCA

>sp|RDRP_RRSVT|RNA-DIRECTED RNA polymerase|Rice ragged stunt virus (isolate

Query: 1 FALGLYCCC 9
+A+G+ CCC
Sbjct: 805 YAIGVACCC 813


>sp|PRO_ADEBA|PROTEASE adenovirus C serotype 10

Query: 2 ALGLYCC 8
A GLYCC
Sbjct: 120 ACGLYCC 126


>sp|DNBI_ADE12|PROBABLE DNA-binding protein|Human adenovirus A serotype 12

Query: 1 FALGLYCCCA 10
F L L+CC A
Sbjct: 120 FVLFLFCCIA 129


>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 5 LYCCC 9
L+CCC
Sbjct: 344 LFCCC 348


>sp|HBSAG_WHV5|LARGE envelope protein|Woodchuck hepatitis B virus (isolate

Query: 6 YCCC 9
YCCC
Sbjct: 341 YCCC 344


>sp|HBSAG_WHV4|LARGE envelope protein|Woodchuck hepatitis B virus (isolate

Query: 6 YCCC 9
YCCC
Sbjct: 341 YCCC 344


>sp|HBSAG_WHV3|LARGE envelope protein|Woodchuck hepatitis B virus (isolate

Query: 6 YCCC 9
YCCC
Sbjct: 341 YCCC 344


>sp|HBSAG_WHV1|LARGE envelope protein|Woodchuck hepatitis B virus (isolate

Query: 6 YCCC 9
YCCC
Sbjct: 336 YCCC 339


>sp|HBSAG_GSHV|LARGE envelope protein|Ground squirrel hepatitis virus (strain

Query: 6 YCCC 9
YCCC
Sbjct: 338 YCCC 341


>sp|GLYCO_SHRV|GLYCOPROTEIN rhabdovirus (SHRV)

Query: 6 YCCC 9
YCCC
Sbjct: 486 YCCC 489


>sp|HBSAG_WHV2|LARGE envelope protein|Woodchuck hepatitis B virus (isolate

Query: 6 YCCC 9
YCCC
Sbjct: 341 YCCC 344


>sp|US01_HCMVM|PROTEIN US1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5 LYCCC 9
L+CCC
Sbjct: 32 LWCCC 36


>sp|US01_HCMVA|UNCHARACTERIZED protein HQLF3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5 LYCCC 9
L+CCC
Sbjct: 32 LWCCC 36


>sp|PRO_ADEB2|PROTEASE adenovirus 2 (BAdV-2) (Mastadenovirus

Query: 2 ALGLYCC 8
A GL+CC
Sbjct: 119 ACGLFCC 125


>sp|TRX2_HHV8P|TRIPLEX capsid protein 2|Human herpesvirus 8 type P

Query: 2 ALGLYCCCA 10
ALGL C C+
Sbjct: 44 ALGLGCVCS 52


>sp|PRO_ADECU|PROTEASE adenovirus serotype 1 (strain

Query: 2 ALGLYCC 8
A GL+CC
Sbjct: 124 ACGLFCC 130


>sp|PRO_ADECR|PROTEASE adenovirus serotype 1 (strain

Query: 2 ALGLYCC 8
A GL+CC
Sbjct: 124 ACGLFCC 130


>sp|PRO_ADECC|PROTEASE adenovirus serotype 1 (strain

Query: 2 ALGLYCC 8
A GL+CC
Sbjct: 124 ACGLFCC 130


>sp|PRO_ADEB3|PROTEASE adenovirus B serotype 3

Query: 2 ALGLYCC 8
A GL+CC
Sbjct: 121 ACGLFCC 127


>sp|PRO_ADECT|PROTEASE adenovirus serotype 2 (strain

Query: 2 ALGLYCC 8
A GL+CC
Sbjct: 124 ACGLFCC 130


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 6 YCCC 9
YCCC
Sbjct: 3765 YCCC 3768


Query: 4 GLYCC 8
G+YCC
Sbjct: 227 GVYCC 231


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 6 YCCC 9
YCCC
Sbjct: 3763 YCCC 3766


Query: 4 GLYCC 8
G+YCC
Sbjct: 227 GVYCC 231


>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 6 YCCC 9
YCCC
Sbjct: 3763 YCCC 3766


Query: 4 GLYCC 8
G+YCC
Sbjct: 227 GVYCC 231


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 6 YCCC 9
YCCC
Sbjct: 3765 YCCC 3768


Query: 4 GLYCC 8
G+YCC
Sbjct: 227 GVYCC 231


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 6 YCCC 9
YCCC
Sbjct: 3759 YCCC 3762


Query: 4 GLYCC 8
G+YCC
Sbjct: 227 GVYCC 231


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 6 YCCC 9
YCCC
Sbjct: 3771 YCCC 3774


Query: 4 GLYCC 8
G+YCC
Sbjct: 227 GVYCC 231


>sp|PRO_ADE17|PROTEASE adenovirus D serotype 17

Query: 2 ALGLYCC 8
A GL+CC
Sbjct: 122 ACGLFCC 128


>sp|PRO_ADE41|PROTEASE adenovirus F serotype 41

Query: 2 ALGLYCC 8
A GL+CC
Sbjct: 121 ACGLFCC 127


>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 6 YCCC 9
YCCC
Sbjct: 3759 YCCC 3762


>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 6 YCCC 9
YCCC
Sbjct: 3771 YCCC 3774


>sp|PRO_ADE09|PROTEASE adenovirus D serotype 9

Query: 2 ALGLYCC 8
A GL+CC
Sbjct: 122 ACGLFCC 128


>sp|PRO_ADE12|PROTEASE adenovirus A serotype 12

Query: 2 ALGLYCC 8
A GL+CC
Sbjct: 121 ACGLFCC 127


>sp|PRO_ADE03|PROTEASE adenovirus B serotype 3

Query: 2 ALGLYCC 8
A GL+CC
Sbjct: 126 ACGLFCC 132


>sp|PRO_ADE02|PROTEASE adenovirus C serotype 2

Query: 2 ALGLYCC 8
A GL+CC
Sbjct: 121 ACGLFCC 127


>sp|PRO_ADE05|PROTEASE adenovirus C serotype 5

Query: 2 ALGLYCC 8
A GL+CC
Sbjct: 121 ACGLFCC 127


>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)

Query: 1 FALGLYCC 8
F LG+ CC
Sbjct: 734 FLLGILCC 741


>sp|ALPHA_BSMV|REPLICATION protein alpha-A|Barley stripe mosaic virus (BSMV)

Query: 5 LYCCC 9
++CCC
Sbjct: 134 IHCCC 138


>sp|PRO_ADE40|PROTEASE adenovirus F serotype 40

Query: 2 ALGLYCC 8
A GL+CC
Sbjct: 121 ACGLFCC 127


>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 1 FALGLYCC 8
F LG+ CC
Sbjct: 734 FLLGVLCC 741


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 4 GLYCC 8
G+YCC
Sbjct: 227 GVYCC 231


>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 1 FALGLYCC 8
F LG+ CC
Sbjct: 734 FLLGVLCC 741


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 4 GLYCC 8
G+YCC
Sbjct: 227 GVYCC 231


>sp|HBSAG_WHV6|LARGE envelope protein|Woodchuck hepatitis B virus (isolate

Query: 6 YCCC 9
YCCC
Sbjct: 202 YCCC 205




83|SequenceR|420|411|GALIGFALGL

>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)

Query: 1 GALIGFALGL 10
GA++GF LG+
Sbjct: 4 GAVVGFLLGV 13


>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)

Query: 1 GALIGFALGL 10
GA++GF LG+
Sbjct: 4 GAVVGFLLGV 13


>sp|Y056_SIFVH|UNCHARACTERIZED protein 56|Sulfolobus islandicus filamentous virus (isolate

Query: 1 GALIGFA 7
GALIGFA
Sbjct: 60 GALIGFA 66




84|SequenceR|425|416|ASFHSGALIG

>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)

Query: 3 FHSGALIG 10
FH+GAL+G
Sbjct: 397 FHTGALVG 404


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 3 FHSGALI 9
FHSGALI
Sbjct: 184 FHSGALI 190


>sp|GP_SFTS|ENVELOPMENT polyprotein|Dabie bandavirus (Severe fever with

Query: 3 FHSGALIG 10
FHSG+L+G
Sbjct: 395 FHSGSLVG 402


>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)

Query: 3 FHSGALIG 10
FHSG+L+G
Sbjct: 395 FHSGSLVG 402


>sp|POLN_SAV1|POLYPROTEIN P1234|Alphavirus salmon subtype 1 (SAV1)

Query: 1 ASFHSGAL 8
+SFHSG+L
Sbjct: 1943 SSFHSGSL 1950


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 1 ASFHSGALI 9
+ FH+GALI
Sbjct: 433 SQFHAGALI 441


>sp|NSP_CLVN|NUCLEAR shuttle protein|African cassava mosaic virus (isolate

Query: 1 ASFHSGALI 9
ASFH G L+
Sbjct: 208 ASFHDGDLV 216


>sp|NSP_CLVK|NUCLEAR shuttle protein|African cassava mosaic virus (isolate

Query: 1 ASFHSGALI 9
ASFH G L+
Sbjct: 208 ASFHDGDLV 216


>sp|RDRP_TYYVF|PROTEIN P1-P2|Turnip yellows virus (isolate FL-1)

Query: 1 ASFHSGAL 8
A+FH+GA+
Sbjct: 916 AAFHTGAI 923


>sp|POLN_SAV2|POLYPROTEIN P1234|Alphavirus salmon subtype 2 (SAV2)

Query: 1 ASFHSGALI 9
ASF SG+L+
Sbjct: 1935 ASFRSGSLV 1943


>sp|DPO23_BPK64|PROBABLE tail spike protein|Klebsiella phage K64-1 (Bacteriophage K64-1)

Query: 1 ASFHSGALIG 10
AS+ +GA++G
Sbjct: 249 ASYQTGAVLG 258


>sp|RDRP_BBSCV|RNA replication polyprotein|Blueberry scorch virus (BBScV)

Query: 2 SFHSGALIG 10
+ HSGAL G
Sbjct: 300 AVHSGALAG 308


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 1 ASFHSGALI 9
+ FH GAL+
Sbjct: 184 SKFHQGALL 192


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 1 ASFHSGALI 9
+ FH GAL+
Sbjct: 184 SKFHQGALL 192


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 1 ASFHSGALI 9
+ FH GAL+
Sbjct: 184 SKFHQGALL 192


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 1 ASFHSGALI 9
+ FH GAL+
Sbjct: 184 SKFHQGALL 192


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 1 ASFHSGALI 9
+ FH GAL+
Sbjct: 184 SKFHQGALL 192




85|SequenceR|430|421|AFIWNASFHS

>sp|GP18_BPMU|UNCHARACTERIZED protein gp18|Escherichia phage Mu (Bacteriophage Mu)

Query: 4 WNASFH 9
WNASFH
Sbjct: 5 WNASFH 10


>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)

Query: 2 FIWNASFH 9
FIWN FH
Sbjct: 337 FIWNRVFH 344


>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)

Query: 2 FIWNASFH 9
F+WN FH
Sbjct: 346 FLWNRVFH 353


>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)

Query: 2 FIWNASFH 9
F+WN FH
Sbjct: 346 FLWNRVFH 353


>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain

Query: 2 FIWNASFH 9
F+WN FH
Sbjct: 346 FLWNRVFH 353


>sp|1A_CMVQ|REPLICATION protein 1a|Cucumber mosaic virus (strain Q)

Query: 3 IWNASF 8
+WNASF
Sbjct: 443 MWNASF 448


>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)

Query: 4 WNASFHS 10
W+A+FH+
Sbjct: 1417 WSAAFHA 1423


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 4 WNASFHS 10
W ASFHS
Sbjct: 862 WIASFHS 868


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 4 WNASFHS 10
W ASFHS
Sbjct: 862 WIASFHS 868


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 4 WNASFHS 10
W ASFHS
Sbjct: 862 WIASFHS 868


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 4 WNASFHS 10
W ASFHS
Sbjct: 862 WIASFHS 868


>sp|REP_AHEBV|REPLICATION-ASSOCIATED protein|Avon-Heathcote Estuary associated kieseladnavirus (AHEaBV)

Query: 2 FIWNAS 7
FIWNAS
Sbjct: 189 FIWNAS 194


>sp|RDRP_PMV|RNA replication protein|Papaya mosaic potexvirus (PMV)

Query: 3 IWNASFH 9
+WN+S H
Sbjct: 1206 LWNSSMH 1212


>sp|HELI1_TNAVC|PUTATIVE ATP-dependent RNA helicase|Trichoplusia ni ascovirus 2c (TnAV-2c)

Query: 4 WNASF 8
WNASF
Sbjct: 177 WNASF 181


>sp|YL673_MIMIV|PUTATIVE serine/threonine-protein kinase L673|Acanthamoeba polyphaga

Query: 2 FIWNASFH 9
IWN ++H
Sbjct: 198 LIWNRAYH 205


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 4 WNASFHS 10
W A+FHS
Sbjct: 862 WIAAFHS 868




86|SequenceR|435|426|MGGALAFIWN

>sp|HOL24_BPSPP|HOLIN-LIKE protein 24.1|Bacillus phage SPP1 (Bacteriophage SPP1)

Query: 1 MGGALAFIWN 10
+GG L +WN
Sbjct: 70 VGGILTIVWN 79


>sp|CAPSD_HASV|CAPSID protein|Helicoverpa armigera stunt virus (HaSV)

Query: 2 GGALAFIW 9
ALAF+W
Sbjct: 297 AAALAFVW 304


>sp|ICP0_SUHVF|E3 ubiquitin-protein ligase ICP0|Suid herpesvirus 1 (strain

Query: 1 MGGALAFIW 9
+GG A IW
Sbjct: 120 VGGGFAVIW 128


>sp|TMP_LAMBD|TAPE measure protein|Escherichia phage lambda (Bacteriophage lambda)

Query: 3 GALAFIW 9
GALA+ W
Sbjct: 133 GALAYAW 139


>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 MGGALAFIWN 10
+ G+LA IW+
Sbjct: 749 VNGSLALIWD 758


>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 MGGALAFIWN 10
+ G+LA IW+
Sbjct: 744 VNGSLALIWD 753


>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 MGGALAFIWN 10
+ G+LA IW+
Sbjct: 749 VNGSLALIWD 758


>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 MGGALAFIWN 10
+ G+LA IW+
Sbjct: 747 VNGSLALIWD 756


>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 MGGALAFIWN 10
+ G+LA IW+
Sbjct: 749 VNGSLALIWD 758


>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 MGGALAFIWN 10
+ G+LA IW+
Sbjct: 749 VNGSLALIWD 758


>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 MGGALAFIWN 10
+ G+LA IW+
Sbjct: 754 VNGSLALIWD 763




87|SequenceR|440|431|SIYLFMGGAL

>sp|DNBI_PSHV1|MAJOR DNA-binding protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 SIYLFMGG 8
S+Y+F GG
Sbjct: 100 SVYVFYGG 107


>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)

Query: 1 SIYLFMGG 8
S+Y+F GG
Sbjct: 93 SVYVFHGG 100


>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)

Query: 1 SIYLFMGG 8
S+Y+F GG
Sbjct: 93 SVYVFHGG 100


>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)

Query: 1 SIYLFMGG 8
S+Y+F GG
Sbjct: 93 SVYVFHGG 100


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 1 SIYLFMGG 8
S+Y+F GG
Sbjct: 93 SVYVFHGG 100


>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 1 SIYLFMGG 8
S+Y+F GG
Sbjct: 93 SVYVFHGG 100




88|SequenceR|445|436|FMDALSIYLF

>sp|RDRP_CLBVS|RNA replication polyprotein|Citrus leaf blotch virus (isolate

Query: 1 FMDALSIYLF 10
FM+A IYLF
Sbjct: 740 FMEAELIYLF 749


>sp|U18_HHV6U|PUTATIVE immediate early glycoprotein|Human herpesvirus 6A (strain

Query: 2 MDALSIYLF 10
M++LS+Y+F
Sbjct: 6 MESLSVYIF 14




89|SequenceR|450|441|ENMEPFMDAL

>sp|POLG_PVYC|GENOME polyprotein|Potato virus Y (strain C)

Query: 2 NMEPFMD 8
++EPFMD
Sbjct: 36 SVEPFMD 42


>sp|GH_EHV1B|ENVELOPE glycoprotein H|Equine herpesvirus 1 (strain Ab4p)

Query: 1 ENMEPFM 7
EN+EPF+
Sbjct: 128 ENVEPFL 134


>sp|GH_EHV1|ENVELOPE glycoprotein H|Equine herpesvirus 1 (strain HVS25A)

Query: 1 ENMEPFM 7
EN+EPF+
Sbjct: 128 ENVEPFL 134


>sp|Y018_HIS1I|UNCHARACTERIZED protein ORF18|His1 virus (isolate Australia/Victoria) (His1V)

Query: 1 ENMEPFMDAL 10
E+M+PF++ L
Sbjct: 84 EHMQPFIEGL 93




90|SequenceR|455|446|DEQCVENMEP

>sp|VF098_IIV3|UNCHARACTERIZED protein 038R|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 EQCVENMEP 10
EQC ++EP
Sbjct: 484 EQCTSSVEP 492


>sp|VG56_ICHVA|UNCHARACTERIZED protein ORF56|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 QCVENMEP 10
+CV N+EP
Sbjct: 989 ECVINLEP 996


>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 2 EQCVEN 7
EQC+EN
Sbjct: 1428 EQCIEN 1433


>sp|VT1_RFVKA|PROTEIN T1|Rabbit fibroma virus (strain Kasza)

Query: 1 DEQCVENME 9
D CVEN++
Sbjct: 205 DTDCVENLD 213


>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 EQCVENMEP 10
EQC++ EP
Sbjct: 942 EQCLQACEP 950


>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 EQCVENMEP 10
EQC++ EP
Sbjct: 959 EQCLQACEP 967


>sp|L_RINDR|RNA-DIRECTED RNA polymerase L|Rinderpest virus (strain RBOK) (RDV)

Query: 2 EQCVEN 7
EQCV+N
Sbjct: 434 EQCVDN 439


>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)

Query: 2 EQCVEN 7
EQCV+N
Sbjct: 434 EQCVDN 439


>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 2 EQCVEN 7
EQCV+N
Sbjct: 434 EQCVDN 439


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 2 EQCVEN 7
EQCV+N
Sbjct: 434 EQCVDN 439


>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 1 DEQCVENMEP 10
D CVEN+ P
Sbjct: 878 DLSCVENVPP 887


>sp|PG001_MONPV|CHEMOKINE-BINDING protein|Monkeypox virus (MPXV)

Query: 1 DEQCVENME 9
D +CV+N+E
Sbjct: 190 DTKCVKNLE 198


>sp|1ATF_PRRSS|TRUNCATED polyprotein 1aTF|Porcine reproductive and respiratory syndrome

Query: 2 EQCVENMEP 10
EQC++ EP
Sbjct: 942 EQCLQACEP 950


>sp|PG001_VAR67|CHEMOKINE-BINDING protein|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 DEQCVENME 9
D +CV+N+E
Sbjct: 197 DTKCVKNLE 205


>sp|PG001_VACCL|CHEMOKINE-BINDING protein|Vaccinia virus (strain Lister) (VACV)

Query: 1 DEQCVENME 9
D +CV+N+E
Sbjct: 202 DTKCVKNLE 210


>sp|PG001_VACCC|INACTIVE chemokine-binding protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 DEQCVENME 9
D +CV+N+E
Sbjct: 188 DTKCVKNLE 196


>sp|PG001_VACCW|INACTIVE chemokine-binding protein|Vaccinia virus (strain Western Reserve)

Query: 1 DEQCVENME 9
D +CV+N+E
Sbjct: 188 DTKCVKNLE 196


>sp|RPOTF_PRRSL|REPLICASE polyprotein 1TF|Porcine reproductive and respiratory syndrome

Query: 2 EQCVENMEP 10
EQC++ EP
Sbjct: 959 EQCLQACEP 967




91|SequenceR|460|451|SGKREDEQCV

>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3365 GKREDQWC 3372


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3363 GKREDQWC 3370


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3330 GKREDQWC 3337


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3330 GKREDQWC 3337


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3330 GKREDQWC 3337


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3332 GKREDQWC 3339


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3330 GKREDQWC 3337


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3330 GKREDQWC 3337


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3368 GKREDQWC 3375


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3331 GKREDQWC 3338


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3331 GKREDQWC 3338


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3331 GKREDQWC 3338


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3331 GKREDQWC 3338


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3331 GKREDQWC 3338


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3331 GKREDQWC 3338


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3328 GKREDQWC 3335


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3331 GKREDQWC 3338


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 1 SGKREDEQC 9
SGKRED C
Sbjct: 3369 SGKREDIWC 3377


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 1 SGKREDEQC 9
SGKRED C
Sbjct: 3372 SGKREDIWC 3380


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 1 SGKREDEQC 9
SGKRED C
Sbjct: 3372 SGKREDIWC 3380


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2 GKREDEQC 9
GKRED C
Sbjct: 3332 GKREDRWC 3339


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 1 SGKREDEQC 9
+GKRED C
Sbjct: 3373 TGKREDIWC 3381


>sp|CAPSD_PASV1|CAPSID polyprotein VP90|Porcine astrovirus 1 (PAstV-1)

Query: 1 SGKREDEQCV 10
SGK E E C+
Sbjct: 99 SGKTELEACI 108


>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 1 SGKREDEQCV 10
SGK+ D CV
Sbjct: 1706 SGKQYDAYCV 1715


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 1 SGKREDEQCV 10
SGK+ D CV
Sbjct: 1706 SGKQYDAYCV 1715


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 1 SGKREDEQCV 10
SGK+ D CV
Sbjct: 1706 SGKQYDAYCV 1715


>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P

Query: 3 KREDEQCV 10
K E+EQCV
Sbjct: 195 KPEEEQCV 202


>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 1 SGKREDEQCV 10
SGK+ D CV
Sbjct: 1706 SGKQYDAYCV 1715


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 1 SGKREDEQCV 10
SGK+ D CV
Sbjct: 1707 SGKQYDAYCV 1716


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 1 SGKREDEQCV 10
SGK+ D CV
Sbjct: 1707 SGKQYDAYCV 1716


>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 1 SGKREDEQCV 10
SGK+ D CV
Sbjct: 1707 SGKQYDAYCV 1716


>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 1 SGKREDEQCV 10
SGK+ D CV
Sbjct: 1706 SGKQYDAYCV 1715


>sp|GSTG_BPT6|BETA-GLUCOSYL-HMC-ALPHA-GLUCOSYL-TRANSFERASE phage T6 (Bacteriophage T6)

Query: 3 KREDEQCV 10
KR+D +CV
Sbjct: 91 KRDDRRCV 98


>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 1 SGKREDEQCV 10
SGK+ D CV
Sbjct: 1706 SGKQYDAYCV 1715


>sp|GSTG_BPT2|BETA-GLUCOSYL-HMC-ALPHA-GLUCOSYL-TRANSFERASE phage T2 (Bacteriophage T2)

Query: 3 KREDEQCV 10
KR+D +CV
Sbjct: 91 KRDDRRCV 98




92|SequenceR|465|456|FPILISGKRE

>sp|YLYS_BPPHV|UNCHARACTERIZED protein near lysin gene|Lactococcus phage phivML3 (Lactococcus

Query: 4 LISGKRE 10
LISGKRE
Sbjct: 107 LISGKRE 113


>sp|Y009_OSHVF|PUTATIVE RING finger protein ORF9|Ostreid herpesvirus 1 (isolate France)

Query: 1 FPILISGKR 9
+PI+I GKR
Sbjct: 552 YPIIILGKR 560


>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 1 FPILISGK 8
FPI++ GK
Sbjct: 128 FPIMLEGK 135


>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 1 FPILISGK 8
FPI++ GK
Sbjct: 128 FPIMLEGK 135


>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 1 FPILISGK 8
FPI++ GK
Sbjct: 127 FPIMLEGK 134


>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 1 FPILISGK 8
FPI++ GK
Sbjct: 128 FPIMLEGK 135


>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 1 FPILISGK 8
FPI++ GK
Sbjct: 128 FPIMLEGK 135


>sp|RDRP_GVAIS|RNA replication protein|Grapevine virus A (isolate Is

Query: 1 FPILISGKR 9
FPI I G+R
Sbjct: 824 FPIAIHGER 832


>sp|POLG_HED68|GENOME polyprotein|Human enterovirus D68 (EV68) (EV-68)

Query: 1 FPILISGKRE 10
FP L+ GK++
Sbjct: 1845 FPYLLQGKKK 1854


>sp|POL2_CPSMV|RNA2 polyprotein|Cowpea severe mosaic virus (strain

Query: 1 FPILISGKRE 10
F +ISGK+E
Sbjct: 392 FRYMISGKKE 401


>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)

Query: 1 FPILISGK 8
FP+++ GK
Sbjct: 107 FPVMLDGK 114




93|SequenceR|470|461|LNQIIFPILI

>sp|VG65_ICHVA|UNCHARACTERIZED protein ORF65|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 LNQIIFPIL 9
+NQ IFPIL
Sbjct: 643 VNQFIFPIL 651


>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain

Query: 2 NQIIFPIL 9
NQ+I P+L
Sbjct: 57 NQVIIPVL 64


>sp|NSP1_ROTF6|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Cat/Japan/FRV64/1989/G3P5B[3])

Query: 2 NQIIFPILI 10
NQ++FPI +
Sbjct: 135 NQLLFPITL 143


>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)

Query: 1 LNQIIFPILI 10
LN++IFP+ +
Sbjct: 157 LNELIFPVQV 166


>sp|NSP1_ROTD9|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Dog/United

Query: 2 NQIIFPILI 10
NQ++FPI +
Sbjct: 135 NQLLFPITL 143




94|SequenceR|475|466|GTLLGLNQII

***** No hits found ******


95|SequenceR|480|471|VMITFGTLLG

>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)

Query: 3 ITFGTLLG 10
+TFG LLG
Sbjct: 258 VTFGDLLG 265




96|SequenceR|485|476|YMTLVVMITF

***** No hits found ******


97|SequenceR|492|481|GIQIQGSYMTLV

>sp|DPO12_BPK64|DEPOLYMERASE, capsule KN4-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)

Query: 2 IQIQGSYMTLV 12
+QI GSY+TL
Sbjct: 618 LQIAGSYITLT 628


>sp|ENV_MLVCB|ENVELOPE glycoprotein|Cas-Br-E murine leukemia virus

Query: 4 IQGSYMTL 11
+QG+Y+TL
Sbjct: 314 VQGAYLTL 321


>sp|ENV_FLVC6|ENVELOPE glycoprotein|Feline leukemia virus (isolate CFE-6)

Query: 4 IQGSYMTL 11
+QG+Y+TL
Sbjct: 314 VQGTYLTL 321


>sp|TGB1_LSV|MOVEMENT and silencing protein TGBp1|Lily symptomless virus (LSV)

Query: 2 IQIQGSYMT 10
+QIQG Y T
Sbjct: 144 VQIQGLYET 152


>sp|RDRP_TYYVF|PROTEIN P1-P2|Turnip yellows virus (isolate FL-1)

Query: 1 GIQIQGSYMT 10
G+Q GSY T
Sbjct: 896 GVQKSGSYNT 905


>sp|RDRP_PNLV|PROTEIN P2-P3|Poinsettia latent virus (isolate Euphorbia

Query: 1 GIQIQGSYMT 10
G+Q GSY T
Sbjct: 964 GVQKSGSYNT 973


>sp|RDRP_PLRVW|PROTEIN P1-P2|Potato leafroll virus (strain

Query: 1 GIQIQGSYMT 10
G+Q GSY T
Sbjct: 926 GVQKSGSYNT 935


>sp|RDRP_PLRV1|PROTEIN P1-P2|Potato leafroll virus (strain Potato/Scotland/strain

Query: 1 GIQIQGSYMT 10
G+Q GSY T
Sbjct: 926 GVQKSGSYNT 935


>sp|ENDO1_BPT5|PUTATIVE endonuclease|Escherichia phage T5 (Enterobacteria phage

Query: 1 GIQIQGSYM 9
GIQI G Y+
Sbjct: 72 GIQIVGEYV 80


>sp|YL537_MIMIV|UNCHARACTERIZED protein L537|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 QIQGSYMTLV 12
++ G Y+TL+
Sbjct: 329 KVNGKYLTLI 338




THE END