S39AE_HUMAN Blast OutputR
HumanVirus
1|SequenceR|10|1|FAPHLLLLKM

>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P

Query: 1 FAPHLL 6
F+PHLL
Sbjct: 415 FSPHLL 420


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 2 APHLLLL 8
+PH LLL
Sbjct: 569 SPHALLL 575




2|SequenceR|15|6|LLCSQFAPHL

>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 1 LLCSQFAPH 9
++C+ APH
Sbjct: 1269 IICADLAPH 1277


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1 LLCSQFAP 8
LLC +F P
Sbjct: 2010 LLCVRFGP 2017


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1 LLCSQFAP 8
LLC +F P
Sbjct: 2010 LLCVRFGP 2017


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 3 CSQFAPHL 10
CSQ AP++
Sbjct: 1717 CSQAAPYI 1724


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 3 CSQFAPHL 10
CSQ AP++
Sbjct: 1719 CSQSAPYI 1726


>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)

Query: 3 CSQFAP 8
C++FAP
Sbjct: 271 CTRFAP 276


>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 CSQFAP 8
C++FAP
Sbjct: 271 CTRFAP 276


>sp|U24_HHV6U|U24 protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 LLCSQFAPHL 10
++C Q +PH+
Sbjct: 19 VMCGQVSPHV 28


>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P

Query: 2 LCSQFAPHL 10
LC F P L
Sbjct: 772 LCQSFVPEL 780


>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka

Query: 2 LCSQFAPHL 10
LC F P L
Sbjct: 263 LCDNFHPEL 271


>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)

Query: 2 LCSQFAPHL 10
LC F P L
Sbjct: 263 LCDNFHPEL 271


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 3 CSQFAPHL 10
CS F P+L
Sbjct: 3105 CSLFNPNL 3112


>sp|PG005_MONPV|PROTEIN OPG005|Monkeypox virus (MPXV)

Query: 3 CSQFAP 8
C+QF+P
Sbjct: 5 CAQFSP 10


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 2 LCSQFA 7
+CS+FA
Sbjct: 310 MCSEFA 315


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 2 LCSQFA 7
+CS+FA
Sbjct: 310 MCSEFA 315


>sp|PG005_VACCC|PROTEIN OPG005|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 CSQFAP 8
C+QF P
Sbjct: 36 CAQFRP 41


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 1 LLCSQFAPHL 10
L+C+ HL
Sbjct: 2087 LICTMLTTHL 2096


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 1 LLCSQFAPHL 10
L+C+ HL
Sbjct: 2087 LICTMLTTHL 2096




3|SequenceR|20|11|GLLTLLLCSQ

>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1 GLLTLLLCS 9
GLL L LCS
Sbjct: 1134 GLLMLFLCS 1142


>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 GLLTLLLCS 9
GL+TL CS
Sbjct: 36 GLITLSACS 44


>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 GLLTLLLCS 9
GL+TL CS
Sbjct: 105 GLITLSACS 113


>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)

Query: 2 LLTLLLCSQ 10
+LT ++C+Q
Sbjct: 311 ILTYIICNQ 319


>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 LLTLLLCSQ 10
+LT ++C+Q
Sbjct: 311 ILTYIICNQ 319


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 2 LLTLLLCS 9
L T+LLC+
Sbjct: 1295 LATMLLCA 1302


>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 GLLTLLLCSQ 10
G LLLC Q
Sbjct: 158 GQRVLLLCKQ 167


>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P

Query: 1 GLLTLLLC 8
G+LT+++C
Sbjct: 323 GILTMIIC 330


>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 2 LLTLLLC 8
++T+LLC
Sbjct: 1211 MVTILLC 1217


>sp|U79_HHV7J|PROTEIN U79|Human herpesvirus 7 (strain JI)

Query: 1 GLLTLLLCSQ 10
G LTL +C++
Sbjct: 69 GSLTLDICTE 78




4|SequenceR|25|16|TTRWLGLLTL

>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 3 RWLGLL 8
RWLG+L
Sbjct: 760 RWLGIL 765


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3 RWLGLL 8
RWLG+L
Sbjct: 760 RWLGIL 765


>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate

Query: 2 TRWLGLLT 9
+RW GLL+
Sbjct: 90 SRWSGLLS 97


Query: 4 WLGLLTL 10
WLG+L +
Sbjct: 103 WLGMLVV 109


>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)

Query: 3 RWLGLLT 9
RW GLL+
Sbjct: 93 RWSGLLS 99


Query: 4 WLGLLTL 10
WLGL+ +
Sbjct: 105 WLGLIAV 111


>sp|V30K_HCMVE|30 kDa major early protein|Human cytomegalovirus (strain Eisenhardt)

Query: 1 TTRWLGLLT 9
+TRW+ L++
Sbjct: 45 STRWVALVS 53


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 3 RWLGLLTL 10
RW G LTL
Sbjct: 1168 RWTGKLTL 1175




5|SequenceR|30|21|AHAEPTTRWL

>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 2 HAEPTTRWL 10
H PT RW+
Sbjct: 1198 HVRPTIRWI 1206


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 2 HAEPTTRWL 10
H PT RW+
Sbjct: 1198 HVRPTIRWI 1206


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 2 HAEPTTRWL 10
H PT RW+
Sbjct: 1199 HVRPTIRWI 1207


Query: 4 EPTTRWL 10
EPT W+
Sbjct: 1891 EPTRSWM 1897


>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 1 AHAEPTTRWL 10
A+ EPTT W+
Sbjct: 630 ANPEPTTEWI 639


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 1 AHAEPTTRWL 10
A+ EPTT W+
Sbjct: 630 ANPEPTTEWI 639


>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)

Query: 1 AHAEPTTRWL 10
A+ EPTT W+
Sbjct: 630 ANPEPTTEWI 639


>sp|PKG3_ADE12|PACKAGING protein 3|Human adenovirus A serotype 12

Query: 3 AEPTTRWL 10
AEP RWL
Sbjct: 212 AEPQGRWL 219


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 3 AEPTTR 8
AEPTTR
Sbjct: 469 AEPTTR 474


>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus

Query: 1 AHAEPTT 7
AH EP+T
Sbjct: 637 AHQEPST 643


>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)

Query: 1 AHAEPTTR 8
AH EPT +
Sbjct: 272 AHGEPTVK 279


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 4 EPTTRWL 10
EP+T W+
Sbjct: 1897 EPSTSWI 1903


>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 1 AHAEPTTR 8
AH EPT +
Sbjct: 404 AHGEPTVK 411


>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5

Query: 4 EPTTRWL 10
EP RWL
Sbjct: 236 EPEGRWL 242


>sp|PKG3_ADE02|PACKAGING protein 3|Human adenovirus C serotype 2

Query: 4 EPTTRWL 10
EP RWL
Sbjct: 236 EPEGRWL 242


>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1 AHAEPTTRWL 10
++A PT +W+
Sbjct: 623 SNARPTRQWI 632


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 1 AHAEPTTRW 9
A +EP +W
Sbjct: 3474 AESEPRLQW 3482


>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 5 PTTRWL 10
PT RW+
Sbjct: 1194 PTIRWV 1199


>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24

Query: 1 AHAEPTTRWL 10
A AEP R+L
Sbjct: 528 AMAEPNYRYL 537


>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)

Query: 2 HAEPTT 7
HA PTT
Sbjct: 69 HAAPTT 74


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 1 AHAEPTTRWL 10
AH + TTR L
Sbjct: 1245 AHKQQTTRVL 1254


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 1 AHAEPTTRWL 10
AH + TTR L
Sbjct: 1245 AHKQQTTRVL 1254


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 4 EPTTRWL 10
+P T WL
Sbjct: 491 KPATNWL 497


>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United

Query: 4 EPTTRWL 10
EP RW+
Sbjct: 1668 EPMFRWM 1674


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 5 PTTRWL 10
P T WL
Sbjct: 491 PATNWL 496


>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 3 AEPTTRWL 10
A PT +W+
Sbjct: 625 ANPTRQWI 632




6|SequenceR|35|26|AGLSSAHAEP

>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus

Query: 5 SAHAEP 10
SAH EP
Sbjct: 636 SAHQEP 641


>sp|US10_HHV2H|VIRION protein US10|Human herpesvirus 2 (strain HG52)

Query: 1 AGLSSAHAE 9
AGL SAH +
Sbjct: 270 AGLYSAHCQ 278


>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate

Query: 3 LSSAHAE 9
LSSAH++
Sbjct: 272 LSSAHSD 278


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 2 GLSSAHAEP 10
G +AHA+P
Sbjct: 952 GNVAAHADP 960




7|SequenceR|40|31|ASIAPAGLSS

***** No hits found ******


8|SequenceR|45|36|QLFSAASIAP

>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 LFSAASI 8
LFSAASI
Sbjct: 67 LFSAASI 73


>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 LFSAASI 8
LFSAASI
Sbjct: 67 LFSAASI 73


>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 LFSAASI 8
LFSAASI
Sbjct: 67 LFSAASI 73




9|SequenceR|50|41|RHILDQLFSA

>sp|PG165_VACCC|PROTEIN OPG165|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 RHILDQLFS 9
RHI DQ+F+
Sbjct: 170 RHICDQIFA 178


>sp|PG165_MONPV|PROTEIN OPG165|Monkeypox virus (MPXV)

Query: 1 RHILDQLFS 9
RHI DQ+F+
Sbjct: 175 RHICDQIFA 183


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1 RHILDQLFS 9
+HI D LFS
Sbjct: 2066 KHITDPLFS 2074


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1 RHILDQLFS 9
+HI D LFS
Sbjct: 2066 KHITDPLFS 2074


>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)

Query: 1 RHILDQLFSA 10
+HI D+LF +
Sbjct: 765 KHITDRLFKS 774


>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain

Query: 1 RHILDQLFSA 10
+HI D+LF +
Sbjct: 765 KHITDRLFKS 774


>sp|VE6_HPV44|PROTEIN E6|Human papillomavirus 44

Query: 1 RHILDQ 6
RHILD+
Sbjct: 118 RHILDK 123


>sp|C_NIPAV|PROTEIN C|Nipah virus

Query: 1 RHILDQLFS 9
RH DQ+F+
Sbjct: 19 RHTDDQVFN 27


>sp|PHOSP_VSIVS|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 4 LDQLFSA 10
LD+LFS+
Sbjct: 221 LDELFSS 227


>sp|PHOSP_VSIVN|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 4 LDQLFSA 10
LD+LFS+
Sbjct: 221 LDELFSS 227


>sp|PHOSP_VSIVM|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 4 LDQLFSA 10
LD+LFS+
Sbjct: 221 LDELFSS 227


>sp|PHOSP_VSIVG|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 4 LDQLFSA 10
LD+LFS+
Sbjct: 221 LDELFSS 227


>sp|PHOSP_VSIVA|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 4 LDQLFSA 10
LD+LFS+
Sbjct: 221 LDELFSS 227


>sp|US21_HCMVM|MEMBRANE protein US21|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 HILDQLFSA 10
H L+QLFS+
Sbjct: 42 HRLEQLFSS 50


>sp|US21_HCMVA|UNCHARACTERIZED protein HWLF2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 HILDQLFSA 10
H L+QLFS+
Sbjct: 42 HRLEQLFSS 50


>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 RHILDQLF 8
RH+L +LF
Sbjct: 358 RHVLVRLF 365


>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 RHILDQLF 8
RH+L +LF
Sbjct: 364 RHVLVRLF 371


>sp|M2_I96A3|MATRIX protein 2|Influenza A virus (strain A/China:Nanchang/11/1996

Query: 3 ILDQLFS 9
I+D+LFS
Sbjct: 42 IIDRLFS 48


>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P

Query: 2 HILDQL 7
H++DQL
Sbjct: 590 HVIDQL 595


>sp|M2_I00A1|MATRIX protein 2|Influenza A virus (strain A/New

Query: 3 ILDQLFS 9
I+D+LFS
Sbjct: 42 IIDRLFS 48


>sp|VITF3_VARV|INTERMEDIATE transcription factor 3 large|Variola virus

Query: 2 HILDQLF 8
H++D+LF
Sbjct: 233 HMIDKLF 239


>sp|VITF3_VAR67|INTERMEDIATE transcription factor 3 large|Variola virus (isolate

Query: 2 HILDQLF 8
H++D+LF
Sbjct: 233 HMIDKLF 239


>sp|M2_I07A0|MATRIX protein 2|Influenza A virus (strain A/USA:Texas/UR06-0195/2007

Query: 3 ILDQLFS 9
I+D+LFS
Sbjct: 39 IIDRLFS 45


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2 HILDQLFSA 10
H L ++FSA
Sbjct: 2883 HFLPRVFSA 2891


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2 HILDQLFSA 10
H L ++FSA
Sbjct: 2860 HFLPRVFSA 2868


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 HILDQLFSA 10
H L ++FSA
Sbjct: 2883 HFLPRVFSA 2891


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 HILDQLFSA 10
H L ++FSA
Sbjct: 2860 HFLPRVFSA 2868


>sp|VTF3L_VACCT|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Tian Tan)

Query: 2 HILDQLF 8
H++D+LF
Sbjct: 233 HMIDKLF 239


>sp|VTF3L_VACCA|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Ankara) (VACV)

Query: 2 HILDQLF 8
H++D+LF
Sbjct: 233 HMIDKLF 239


>sp|VITF3_VACCC|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Copenhagen)

Query: 2 HILDQLF 8
H++D+LF
Sbjct: 233 HMIDKLF 239




10|SequenceR|55|46|DGEGYRHILD

>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)

Query: 2 GEGYRHI 8
G+GYRH+
Sbjct: 183 GQGYRHM 189


>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)

Query: 2 GEGYRHI 8
G+GYRH+
Sbjct: 183 GQGYRHM 189


>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 2 GEGYRHI 8
G+GYRH+
Sbjct: 183 GQGYRHM 189


>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)

Query: 2 GEGYRHI 8
G+GYRH+
Sbjct: 183 GQGYRHM 189


>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)

Query: 2 GEGYRHI 8
G+GYRH+
Sbjct: 183 GQGYRHM 189


>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 4 GYRHILD 10
GYRH+ D
Sbjct: 894 GYRHLKD 900


>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 GYRHILD 10
GYRH+ D
Sbjct: 894 GYRHLKD 900


>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 GYRHILD 10
GYRH+ D
Sbjct: 893 GYRHLKD 899


>sp|VE6_HPV44|PROTEIN E6|Human papillomavirus 44

Query: 3 EGYRHILD 10
E RHILD
Sbjct: 115 EKVRHILD 122


>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41

Query: 1 DGEGY 5
DGEGY
Sbjct: 723 DGEGY 727


>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40

Query: 1 DGEGY 5
DGEGY
Sbjct: 721 DGEGY 725


>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12

Query: 1 DGEGY 5
DGEGY
Sbjct: 717 DGEGY 721


>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5

Query: 1 DGEGY 5
DGEGY
Sbjct: 750 DGEGY 754


>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3

Query: 1 DGEGY 5
DGEGY
Sbjct: 742 DGEGY 746


>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 DGEGYRHIL 9
DG YR I+
Sbjct: 223 DGRSYRQII 231


>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16

Query: 1 DGEGY 5
DGEGY
Sbjct: 738 DGEGY 742


>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2

Query: 1 DGEGY 5
DGEGY
Sbjct: 766 DGEGY 770


>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 1 DGEGYRHILD 10
D Y+H+LD
Sbjct: 1344 DRRKYQHLLD 1353


>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7

Query: 1 DGEGY 5
DGEGY
Sbjct: 735 DGEGY 739


>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9

Query: 1 DGEGY 5
DGEGY
Sbjct: 741 DGEGY 745


>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)

Query: 5 YRHILD 10
+RHI+D
Sbjct: 49 FRHIMD 54


>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)

Query: 5 YRHILD 10
+RHI+D
Sbjct: 49 FRHIMD 54


>sp|TRM2_HHV6Z|TRIPARTITE terminase subunit 2|Human herpesvirus 6B (strain Z29)

Query: 4 GYRHI 8
GYRH+
Sbjct: 54 GYRHV 58


>sp|TRM2_HHV6U|TRIPARTITE terminase subunit 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 4 GYRHI 8
GYRH+
Sbjct: 54 GYRHV 58


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 2 GEGYRHIL 9
G GY HI+
Sbjct: 884 GCGYTHII 891


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 2 GEGYRHIL 9
G GY HI+
Sbjct: 884 GCGYTHII 891


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 2 GEGYRHIL 9
G GY HI+
Sbjct: 884 GCGYTHII 891


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 2 GEGYRHIL 9
G GY HI+
Sbjct: 884 GCGYTHII 891


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 2 GEGYRHIL 9
G GY HI+
Sbjct: 884 GCGYTHII 891


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 2 GEGYRHIL 9
G GY HI+
Sbjct: 884 GCGYTHII 891


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 2 GEGYRHIL 9
G GY HI+
Sbjct: 884 GCGYTHII 891


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 2 GEGYRHIL 9
G GY HI+
Sbjct: 884 GCGYTHII 891


>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)

Query: 3 EGYRHILD 10
E + HILD
Sbjct: 365 ERFNHILD 372


>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus

Query: 3 EGYRHILD 10
E + HILD
Sbjct: 365 ERFNHILD 372


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 2 GEGYRHIL 9
G GY HI+
Sbjct: 884 GCGYAHII 891




11|SequenceR|60|51|QLTLSDGEGY

>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka

Query: 1 QLTLSDGE 8
QLTLSD E
Sbjct: 316 QLTLSDVE 323


>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)

Query: 1 QLTLSDGE 8
QLTLSD E
Sbjct: 316 QLTLSDVE 323


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 2 LTLSDGEG 9
+TL++GEG
Sbjct: 1829 ITLAEGEG 1836


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 2 LTLSDGEG 9
+TL++GEG
Sbjct: 1829 ITLAEGEG 1836


>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)

Query: 1 QLTLSDGEGY 10
Q + DG GY
Sbjct: 498 QTKMPDGNGY 507


>sp|CEP2_HCMVA|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 QLTLSDGEGY 10
Q+TL DG Y
Sbjct: 292 QVTLGDGLDY 301


>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)

Query: 3 TLSDGEG 9
TLSD EG
Sbjct: 264 TLSDSEG 270


>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra

Query: 3 TLSDGEG 9
TLSD EG
Sbjct: 265 TLSDSEG 271


>sp|CEP2_HCMVM|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 QLTLSDGEGY 10
Q+TL DG Y
Sbjct: 292 QVTLGDGLDY 301


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 1 QLTLSD 6
QLTLSD
Sbjct: 1605 QLTLSD 1610


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 1 QLTLSD 6
QLTLSD
Sbjct: 1605 QLTLSD 1610


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 1 QLTLSD 6
QLTLSD
Sbjct: 1605 QLTLSD 1610


>sp|BVLF1_EBVB9|LATE gene expression regulator BVLF1|Epstein-Barr virus (strain B95-8)

Query: 1 QLTLSDG 7
Q+TL+DG
Sbjct: 141 QVTLADG 147


>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human

Query: 1 QLTLSDGEG 9
QLT+++ EG
Sbjct: 426 QLTITNSEG 434


>sp|PG035_MONPV|PROTEIN OPG035|Monkeypox virus (MPXV)

Query: 1 QLTLSDG 7
++TLSDG
Sbjct: 47 RMTLSDG 53


>sp|SPIKE_ADE1H|FIBER protein|Human adenovirus D serotype 15/H9

Query: 2 LTLSDGEG 9
LTL DG G
Sbjct: 69 LTLQDGTG 76


>sp|SPIKE_ADE09|FIBER protein|Human adenovirus D serotype 9

Query: 2 LTLSDGEG 9
LTL DG G
Sbjct: 69 LTLQDGTG 76


>sp|PG035_VAR67|PROTEIN OPG035|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 QLTLSDG 7
++TLSDG
Sbjct: 47 RMTLSDG 53


>sp|PG035_VACCC|PROTEIN OPG035|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 QLTLSDG 7
++TLSDG
Sbjct: 47 RMTLSDG 53


>sp|VE2_HPV48|REGULATORY protein E2|Human papillomavirus type 48

Query: 1 QLTLSDGEGY 10
QLTL + E Y
Sbjct: 20 QLTLIEKESY 29


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 2 LTLSDGE 8
+TLS+GE
Sbjct: 167 VTLSEGE 173




12|SequenceR|65|56|LAKLQQLTLS

***** No hits found ******


13|SequenceR|70|61|DLHNLLAKLQ

>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1 DLHNLLAK 8
+LH++LAK
Sbjct: 1490 ELHDVLAK 1497


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 1 DLHNLLA 7
D HNL+A
Sbjct: 882 DHHNLIA 888


>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 1 DLHNLLAK 8
+LH++LAK
Sbjct: 1490 ELHDVLAK 1497


>sp|CEP1_HHV6U|CYTOPLASMIC envelopment protein 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 LHNLLAKL 9
LH L+AKL
Sbjct: 135 LHKLIAKL 142


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1 DLHNLLAKLQ 10
+LH+L KLQ
Sbjct: 333 ELHDLNLKLQ 342


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 2 LHNLLAKLQ 10
LH +LAK +
Sbjct: 1651 LHTVLAKAE 1659


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2 LHNLLAKLQ 10
LH +LAK +
Sbjct: 1651 LHTVLAKAE 1659




14|SequenceR|75|66|RGVGVDLHNL

>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)

Query: 1 RGVGVDLHNL 10
+G+G D+H+L
Sbjct: 709 QGIGADVHHL 718


>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)

Query: 1 RGVGVDLHNL 10
+G+G D+H+L
Sbjct: 708 QGIGADVHHL 717


>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean

Query: 1 RGVGVDLHNL 10
+G+G D+H+L
Sbjct: 708 QGIGADVHHL 717


>sp|SPIKE_ADE08|FIBER protein|Human adenovirus D serotype 8

Query: 1 RGVGVDLHN 9
+G+G DL N
Sbjct: 139 KGIGTDLSN 147


>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean

Query: 3 VGVDLHNL 10
+GVD+H L
Sbjct: 712 IGVDVHAL 719


>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee

Query: 3 VGVDLHNL 10
+GVD+H L
Sbjct: 712 IGVDVHAL 719


>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo

Query: 3 VGVDLHNL 10
+GVD+H L
Sbjct: 711 IGVDVHAL 718


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 5 VDLHN 9
VDLHN
Sbjct: 3554 VDLHN 3558


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 5 VDLHN 9
VDLHN
Sbjct: 3554 VDLHN 3558


>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)

Query: 3 VGVDLHN 9
+GVD HN
Sbjct: 1177 MGVDPHN 1183


>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 2 GVGVDL 7
GVGVD+
Sbjct: 1432 GVGVDI 1437


>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo

Query: 1 RGVGVDLHNL 10
+G+G +H+L
Sbjct: 708 QGIGAAVHHL 717


>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)

Query: 2 GVGVDLHNL 10
GVG+ H L
Sbjct: 116 GVGIHHHTL 124


>sp|VE7_HPV44|PROTEIN E7|Human papillomavirus 44

Query: 4 GVDLHNL 10
G D+H+L
Sbjct: 72 GTDIHHL 78




15|SequenceR|80|71|QTVNGRGVGV

>sp|VE2_HPV49|REGULATORY protein E2|Human papillomavirus type 49

Query: 1 QTVNGRGVG 9
QTV+GR +G
Sbjct: 385 QTVSGRHLG 393


>sp|VE2_HPV24|REGULATORY protein E2|Human papillomavirus 24

Query: 1 QTVNGRGVG 9
QTV+GR G
Sbjct: 364 QTVSGRNSG 372


>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)

Query: 3 VNGRGVGV 10
VNG G G+
Sbjct: 592 VNGAGAGI 599


>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3 VNGRGVGV 10
VNG G G+
Sbjct: 592 VNGAGAGI 599


>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)

Query: 3 VNGRGV 8
+NGRGV
Sbjct: 494 MNGRGV 499


>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)

Query: 3 VNGRGV 8
+NGRGV
Sbjct: 494 MNGRGV 499


>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)

Query: 3 VNGRGV 8
+NGRGV
Sbjct: 493 MNGRGV 498


>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)

Query: 3 VNGRGV 8
+NGRGV
Sbjct: 493 MNGRGV 498


>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)

Query: 3 VNGRGV 8
+NGRGV
Sbjct: 493 MNGRGV 498


>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)

Query: 3 VNGRGV 8
+NGRGV
Sbjct: 493 MNGRGV 498


>sp|UL40_HCMVA|PROTEIN UL40|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 QTVNGRGV 8
QTV+ RGV
Sbjct: 135 QTVHVRGV 142


>sp|UL40_HCMVM|PROTEIN UL40|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 QTVNGRGV 8
QTV+ RGV
Sbjct: 135 QTVHVRGV 142


>sp|M1_INBLE|MATRIX protein 1|Influenza B virus (strain B/Lee/1940)

Query: 1 QTVNGRGVG 9
+T+NG G G
Sbjct: 187 KTMNGMGKG 195


>sp|M1_INBYA|MATRIX protein 1|Influenza B virus (strain B/Yamagata/1/1973)

Query: 1 QTVNGRGVG 9
+T+NG G G
Sbjct: 187 KTMNGMGKG 195


>sp|M1_INBMP|MATRIX protein 1|Influenza B virus (strain B/Memphis/12/1997)

Query: 1 QTVNGRGVG 9
+T+NG G G
Sbjct: 187 KTMNGMGKG 195


>sp|M1_INBAD|MATRIX protein 1|Influenza B virus (strain B/Ann

Query: 1 QTVNGRGVG 9
+T+NG G G
Sbjct: 187 KTMNGMGKG 195


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 VNGRGVG 9
++GRG+G
Sbjct: 2166 MSGRGIG 2172


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 VNGRGVG 9
++GRG+G
Sbjct: 2163 MSGRGIG 2169


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 VNGRGVG 9
++GRG+G
Sbjct: 2166 MSGRGIG 2172


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 3 VNGRGVG 9
++GRG+G
Sbjct: 2166 MSGRGIG 2172


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 VNGRGVG 9
++GRG+G
Sbjct: 2166 MSGRGIG 2172


>sp|M1_INBSI|MATRIX protein 1|Influenza B virus (strain B/Singapore/222/1979)

Query: 1 QTVNGRGVG 9
+T+NG G G
Sbjct: 187 KTMNGMGKG 195




16|SequenceR|85|76|HGQVHQTVNG

>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)

Query: 2 GQVHQTVNG 10
G H TVNG
Sbjct: 948 GNCHLTVNG 956


>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)

Query: 2 GQVHQTVNG 10
G H TVNG
Sbjct: 948 GNCHLTVNG 956


>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)

Query: 2 GQVHQTVNG 10
G H TVNG
Sbjct: 948 GNCHLTVNG 956


>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 2 GQVHQTVNG 10
G+VHQT G
Sbjct: 526 GRVHQTPFG 534


>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 GQVHQTVNG 10
G+VHQT G
Sbjct: 526 GRVHQTPFG 534


>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)

Query: 2 GQVHQTVNG 10
G H TVNG
Sbjct: 948 GNCHLTVNG 956


>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)

Query: 2 GQVHQTVNG 10
G H TVNG
Sbjct: 948 GNCHLTVNG 956


>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)

Query: 2 GQVHQTVNG 10
G H TVNG
Sbjct: 948 GNCHLTVNG 956


>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)

Query: 2 GQVHQTVNG 10
G H TVNG
Sbjct: 948 GNCHLTVNG 956


>sp|C_MEASI|PROTEIN C|Measles virus (strain IP-3-Ca) (MeV)

Query: 1 HGQVHQT 7
HGQ +QT
Sbjct: 28 HGQKYQT 34


>sp|C_MEASE|PROTEIN C|Measles virus (strain Edmonston) (MeV)

Query: 1 HGQVHQT 7
HGQ +QT
Sbjct: 28 HGQKYQT 34


>sp|C_MEASC|PROTEIN C|Measles virus (strain Ichinose-B95a) (MeV)

Query: 1 HGQVHQT 7
HGQ +QT
Sbjct: 28 HGQKYQT 34


>sp|C_MEASA|PROTEIN C|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 1 HGQVHQT 7
HGQ +QT
Sbjct: 28 HGQKYQT 34


>sp|C_MEASY|PROTEIN C|Measles virus (strain Yamagata-1) (MeV)

Query: 1 HGQVHQT 7
HGQ +QT
Sbjct: 28 HGQKYQT 34


>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)

Query: 2 GQVHQTVNG 10
G H TVNG
Sbjct: 948 GNCHLTVNG 956


>sp|VTF3L_VACCT|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Tian Tan)

Query: 1 HGQVHQTVNG 10
+G++ +TV+G
Sbjct: 134 YGEIKKTVHG 143


>sp|VTF3L_VACCA|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Ankara) (VACV)

Query: 1 HGQVHQTVNG 10
+G++ +TV+G
Sbjct: 134 YGEIKKTVHG 143


>sp|VTF3L_MONPZ|INTERMEDIATE transcription factor 3 large|Monkeypox virus (strain Zaire-96-I-16)

Query: 1 HGQVHQTVNG 10
+G++ +TV+G
Sbjct: 134 YGEIKKTVHG 143


>sp|VITF3_VARV|INTERMEDIATE transcription factor 3 large|Variola virus

Query: 1 HGQVHQTVNG 10
+G++ +TV+G
Sbjct: 134 YGEIKKTVHG 143


>sp|VITF3_VAR67|INTERMEDIATE transcription factor 3 large|Variola virus (isolate

Query: 1 HGQVHQTVNG 10
+G++ +TV+G
Sbjct: 134 YGEIKKTVHG 143


>sp|VITF3_VACCC|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Copenhagen)

Query: 1 HGQVHQTVNG 10
+G++ +TV+G
Sbjct: 134 YGEIKKTVHG 143


>sp|VITF3_MONPV|INTERMEDIATE transcription factor 3 large|Monkeypox virus (MPXV)

Query: 1 HGQVHQTVNG 10
+G++ +TV+G
Sbjct: 134 YGEIKKTVHG 143


>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)

Query: 4 VHQTVNG 10
VHQ V+G
Sbjct: 295 VHQAVSG 301


>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b

Query: 2 GQVHQTVNG 10
G H TVNG
Sbjct: 498 GLQHTTVNG 506


>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42

Query: 1 HGQVHQTV 8
HG VH T+
Sbjct: 153 HGAVHGTM 160


>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)

Query: 1 HGQVHQTVN 9
HG + T+N
Sbjct: 625 HGAIQDTLN 633


>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)

Query: 2 GQVHQTVNG 10
G H T+NG
Sbjct: 948 GNCHLTLNG 956


>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 HGQVHQ 6
HG VH+
Sbjct: 100 HGDVHR 105


>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 HGQVHQ 6
HG VH+
Sbjct: 100 HGDVHR 105




17|SequenceR|90|81|TSLNRHGQVH

>sp|VE7_HPV04|PROTEIN E7|Human papillomavirus 4

Query: 2 SLNRHGQ 8
SLNR+G+
Sbjct: 94 SLNRNGR 100


>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988

Query: 1 TSLNRHGQV 9
T NR+GQV
Sbjct: 97 TWWNRNGQV 105




18|SequenceR|95|86|GSSFCTSLNR

>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 3 SFCTSLNR 10
SFCT LNR
Sbjct: 758 SFCTQLNR 765


>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 3 SFCTSLNR 10
SFCT LNR
Sbjct: 740 SFCTQLNR 747


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 2 SSFCTSLNR 10
SSF T+LNR
Sbjct: 2004 SSFTTALNR 2012


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 2 SSFCTSLNR 10
SSF T+LNR
Sbjct: 2004 SSFTTALNR 2012


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 2 SSFCTSLNR 10
SSF T+LNR
Sbjct: 2004 SSFTTALNR 2012


>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain

Query: 2 SSFCTSLNR 10
S+F SLNR
Sbjct: 415 SAFTMSLNR 423


>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human

Query: 2 SSFCTSL 8
S FCTSL
Sbjct: 447 SMFCTSL 453


>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B

Query: 4 FCTSLNR 10
+C+S+NR
Sbjct: 1961 YCSSVNR 1967


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 4 FCTSLN 9
FCTS+N
Sbjct: 6650 FCTSVN 6655


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 4 FCTSLN 9
FCTS+N
Sbjct: 6621 FCTSVN 6626


>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7

Query: 2 SSFCTSLN 9
++FC SLN
Sbjct: 171 TNFCFSLN 178


>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12

Query: 5 CTSLN 9
CTSLN
Sbjct: 157 CTSLN 161


>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus

Query: 1 GSSFCTSL 8
GSSF TSL
Sbjct: 878 GSSFWTSL 885


>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)

Query: 3 SFCTSLN 9
+FC S+N
Sbjct: 355 NFCNSIN 361


>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 GSSFC 5
GSSFC
Sbjct: 253 GSSFC 257


>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United

Query: 3 SFCTSLN 9
++CT+LN
Sbjct: 1116 TYCTNLN 1122


>sp|YVDC_VACCC|UNCHARACTERIZED 7.3 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 GSSFC 5
GSSFC
Sbjct: 41 GSSFC 45


>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)

Query: 1 GSSFCTSLNR 10
G+S C S+ R
Sbjct: 879 GASECRSMER 888


>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)

Query: 1 GSSFCTSLNR 10
G+S C S+ R
Sbjct: 879 GTSECRSMER 888


>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse

Query: 3 SFCTSLN 9
++CT+LN
Sbjct: 1116 TYCTNLN 1122


>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare

Query: 3 SFCTSLN 9
++CT+LN
Sbjct: 1116 TYCTNLN 1122


>sp|B4_HHV6Z|PROTEIN B4|Human herpesvirus 6B (strain Z29)

Query: 1 GSSFCTSLN 9
GS+FC S +
Sbjct: 164 GSAFCLSFS 172




19|SequenceR|100|91|ATFLDGSSFC

>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 TFLDGSSFC 10
+F +GSSFC
Sbjct: 249 SFPEGSSFC 257


>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)

Query: 1 ATFLDGSS 8
ATFLDG +
Sbjct: 252 ATFLDGGN 259


>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 4 LDGSSFC 10
LDG+S C
Sbjct: 138 LDGASVC 144


>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 3 FLDGSSF 9
+ DGSSF
Sbjct: 1179 YTDGSSF 1185


>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 3 FLDGSSF 9
+ DGSSF
Sbjct: 1179 YTDGSSF 1185


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 5 DGSSFC 10
DG+ FC
Sbjct: 2683 DGADFC 2688


>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48

Query: 4 LDGSSFC 10
DG++FC
Sbjct: 485 FDGNTFC 491


>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV

Query: 4 LDGSSFC 10
LDG+S C
Sbjct: 704 LDGASVC 710


>sp|GK_VZVO|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Oka vaccine)

Query: 1 ATFLDGSS 8
+TFLDG S
Sbjct: 67 STFLDGLS 74


>sp|GK_VZVD|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 ATFLDGSS 8
+TFLDG S
Sbjct: 67 STFLDGLS 74


>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)

Query: 2 TFLDG 6
TFLDG
Sbjct: 2164 TFLDG 2168


>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P

Query: 4 LDGSSF 9
LDGSS+
Sbjct: 399 LDGSSY 404


>sp|NSP1_ROT41|NON-STRUCTURAL protein 1|Rotavirus A (isolate

Query: 3 FLDGSSFC 10
F +GSS C
Sbjct: 160 FYEGSSSC 167


>sp|U21_HHV6Z|U21 glycoprotein|Human herpesvirus 6B (strain Z29)

Query: 1 ATFLDGSS 8
A FLDGS+
Sbjct: 157 AFFLDGSN 164




20|SequenceR|105|96|ESFNHATFLD

>sp|GK_VZVO|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Oka vaccine)

Query: 4 NHATFLD 10
NH+TFLD
Sbjct: 65 NHSTFLD 71


>sp|GK_VZVD|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4 NHATFLD 10
NH+TFLD
Sbjct: 65 NHSTFLD 71


>sp|SPI1_VARV|SERINE proteinase inhibitor 1|Variola virus

Query: 1 ESFNHATFLD 10
E F H TF+D
Sbjct: 309 EKFLHKTFID 318


>sp|SPI1_VAR67|SERINE proteinase inhibitor 1|Variola virus (isolate

Query: 1 ESFNHATFLD 10
E F H TF+D
Sbjct: 309 EKFLHKTFID 318


>sp|SPI1_MONPV|SERINE proteinase inhibitor 1|Monkeypox virus (MPXV)

Query: 1 ESFNHATFLD 10
E F H TF+D
Sbjct: 294 EKFLHTTFID 303


>sp|SPI1_VACCC|SERINE proteinase inhibitor 1|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 ESFNHATFLD 10
E F H TF+D
Sbjct: 290 EKFLHTTFID 299


>sp|SPI1_CWPXB|SERINE proteinase inhibitor 1|Cowpox virus (strain Brighton Red)

Query: 1 ESFNHATFLD 10
E F H TF+D
Sbjct: 292 EKFLHKTFID 301


>sp|VL2_HPV34|MINOR capsid protein L2|Human papillomavirus type 34

Query: 2 SFNHATFLD 10
+FN+ TF D
Sbjct: 162 TFNNPTFTD 170


>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 FNHATFL 9
F HATF+
Sbjct: 260 FFHATFM 266


>sp|SPI2_CWPXB|SERINE proteinase inhibitor 2|Cowpox virus (strain Brighton Red)

Query: 1 ESFNHAT 7
E+FNHA+
Sbjct: 169 EAFNHAS 175


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 4 NHATFLD 10
NHA+F++
Sbjct: 1377 NHASFVN 1383


>sp|NEC1_HHV2H|NUCLEAR egress protein 1|Human herpesvirus 2 (strain HG52)

Query: 3 FNHATFL 9
F H TFL
Sbjct: 151 FEHRTFL 157


>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 FNHATFL 9
F HATF+
Sbjct: 260 FFHATFM 266


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 4 NHATFLD 10
NH F+D
Sbjct: 976 NHVAFID 982


>sp|SPI2_MONPV|SERINE proteinase inhibitor 2|Monkeypox virus (MPXV)

Query: 1 ESFNHAT 7
E FNHA+
Sbjct: 172 EPFNHAS 178


>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)

Query: 4 NHATFLD 10
NHA ++D
Sbjct: 869 NHAKYID 875


>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E

Query: 1 ESFNHATFLD 10
+ +H FLD
Sbjct: 177 QELHHGAFLD 186


>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E

Query: 1 ESFNHATFLD 10
+ +H FLD
Sbjct: 177 QELHHGAFLD 186


>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E

Query: 1 ESFNHATFLD 10
+ +H FLD
Sbjct: 177 QELHHGAFLD 186


>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E

Query: 1 ESFNHATFLD 10
+ +H FLD
Sbjct: 177 QELHHGAFLD 186


>sp|NEP_I03A0|NUCLEAR export protein|Influenza A virus (strain A/Hong

Query: 2 SFNHATFL 9
SF H TF+
Sbjct: 93 SFEHITFM 100




21|SequenceR|110|101|GIRSQESFNH

>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 3 RSQESFNH 10
++QESF+H
Sbjct: 215 KTQESFDH 222


>sp|PG130_MONPV|39KDA core protein OPG130|Monkeypox virus (MPXV)

Query: 1 GIRSQESF 8
G++SQES+
Sbjct: 40 GLKSQESY 47


>sp|PG130_VACCC|39KDA core protein OPG130|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 GIRSQESF 8
G++SQES+
Sbjct: 40 GLKSQESY 47


>sp|VE7_HPV37|PROTEIN E7|Human papillomavirus 37

Query: 1 GIRSQESF 8
GIRSQE
Sbjct: 68 GIRSQEEL 75


>sp|VE7_HPV17|PROTEIN E7|Human papillomavirus 17

Query: 1 GIRSQESF 8
GIRSQE
Sbjct: 69 GIRSQEEL 76


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 1 GIRSQESFNH 10
GIRS F H
Sbjct: 849 GIRSVNRFEH 858


>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 1 GIRSQESFNH 10
G+R+ ++ NH
Sbjct: 1821 GLRTNQAINH 1830


>sp|PG130_VARV|39KDA core protein OPG130|Variola virus

Query: 1 GIRSQESF 8
G++SQES+
Sbjct: 40 GLKSQESY 47


>sp|PG130_VAR67|39KDA core protein OPG130|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 GIRSQESF 8
G++SQES+
Sbjct: 40 GLKSQESY 47


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 1 GIRSQESFNH 10
G+R+ ++ NH
Sbjct: 1821 GLRANQTVNH 1830


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 3 RSQESFNH 10
R Q+S NH
Sbjct: 1456 RLQQSLNH 1463


>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7

Query: 1 GIRSQESFNH 10
GI++QE+F
Sbjct: 347 GIKAQEAFKQ 356




22|SequenceR|115|106|QLESSGIRSQ

***** No hits found ******


23|SequenceR|120|111|TPCFEQLESS

>sp|VE7_HPV42|PROTEIN E7|Human papillomavirus 42

Query: 3 CFEQLESS 10
C+EQL+SS
Sbjct: 27 CYEQLDSS 34


>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)

Query: 1 TPCFEQ 6
+PCF Q
Sbjct: 345 SPCFSQ 350


>sp|VE7_HPV11|PROTEIN E7|Human papillomavirus 11

Query: 3 CFEQLESS 10
C+EQLE S
Sbjct: 25 CYEQLEDS 32


>sp|VE7_HPV44|PROTEIN E7|Human papillomavirus 44

Query: 3 CFEQLESS 10
C EQL+SS
Sbjct: 25 CNEQLDSS 32


>sp|VE7_HPV70|PROTEIN E7|Human papillomavirus type 70

Query: 3 CFEQLESS 10
C EQLE S
Sbjct: 28 CHEQLEDS 35


>sp|VE7_HPV55|PROTEIN E7|Human papillomavirus type 55

Query: 3 CFEQLESS 10
C EQL+SS
Sbjct: 25 CNEQLDSS 32


>sp|VE7_HPV07|PROTEIN E7|Human papillomavirus 7

Query: 3 CFEQLESS 10
C EQL+SS
Sbjct: 24 CNEQLDSS 31


>sp|VE7_HPV29|PROTEIN E7|Human papillomavirus 29

Query: 3 CFEQLESS 10
C EQL+SS
Sbjct: 24 CNEQLDSS 31


>sp|VE7_HPV13|PROTEIN E7|Human papillomavirus 13

Query: 3 CFEQLESS 10
C EQL+SS
Sbjct: 24 CNEQLDSS 31


>sp|VE7_HPV40|PROTEIN E7|Human papillomavirus 40

Query: 3 CFEQLESS 10
C EQL+SS
Sbjct: 24 CNEQLDSS 31


>sp|VE7_HPV54|PROTEIN E7|Human papillomavirus type 54

Query: 3 CFEQLESS 10
C EQLE S
Sbjct: 24 CREQLEDS 31


>sp|ORF5_MERS1|NON-STRUCTURAL protein ORF5|Middle East respiratory syndrome-related coronavirus

Query: 1 TPCFEQLESS 10
+P F ++ES+
Sbjct: 17 SPAFHRIEST 26


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 1 TPCFEQL 7
TP FE+L
Sbjct: 209 TPLFEKL 215


>sp|VE7_HPV48|PROTEIN E7|Human papillomavirus type 48

Query: 3 CFEQL 7
CFEQL
Sbjct: 67 CFEQL 71


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 3 CFEQLESS 10
C EQLE++
Sbjct: 2863 CQEQLEAA 2870




24|SequenceR|125|116|LQQLITPCFE

>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 4 LITPC 8
LITPC
Sbjct: 2452 LITPC 2456


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 4 LITPC 8
LITPC
Sbjct: 2438 LITPC 2442


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 4 LITPC 8
LITPC
Sbjct: 2430 LITPC 2434


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 4 LITPC 8
LITPC
Sbjct: 2441 LITPC 2445


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 4 LITPC 8
LITPC
Sbjct: 2452 LITPC 2456


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 4 LITPC 8
LITPC
Sbjct: 2430 LITPC 2434


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 4 LITPC 8
LITPC
Sbjct: 2432 LITPC 2436


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 4 LITPC 8
LITPC
Sbjct: 2433 LITPC 2437


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 4 LITPC 8
LITPC
Sbjct: 2452 LITPC 2456


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 4 LITPC 8
LITPC
Sbjct: 2452 LITPC 2456


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 4 LITPC 8
LITPC
Sbjct: 2440 LITPC 2444


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 4 LITPC 8
LITPC
Sbjct: 2452 LITPC 2456


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 4 LITPC 8
LITPC
Sbjct: 2440 LITPC 2444


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 4 LITPC 8
LITPC
Sbjct: 2456 LITPC 2460


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 4 LITPC 8
LITPC
Sbjct: 2433 LITPC 2437


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 LITPC 8
LITPC
Sbjct: 2429 LITPC 2433


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 LITPC 8
LITPC
Sbjct: 2429 LITPC 2433


>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 4 LITPCF 9
LITPC
Sbjct: 24 LITPCL 29


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 4 LITPC 8
LITPC
Sbjct: 2438 LITPC 2442


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 LITPC 8
LITPC
Sbjct: 2429 LITPC 2433


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 LITPC 8
LITPC
Sbjct: 2429 LITPC 2433


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 LITPC 8
LITPC
Sbjct: 2429 LITPC 2433


Query: 2 QQLITPC 8
Q+LIT C
Sbjct: 2779 QELITSC 2785


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 LITPC 8
LITPC
Sbjct: 2429 LITPC 2433


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 LITPC 8
LITPC
Sbjct: 2430 LITPC 2434


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 4 LITPC 8
LITPC
Sbjct: 2438 LITPC 2442


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 LITPC 8
LITPC
Sbjct: 2429 LITPC 2433


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 4 LITPC 8
LITPC
Sbjct: 2437 LITPC 2441


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 2 QQLITPC 8
+ L+TPC
Sbjct: 3255 RTLVTPC 3261


>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)

Query: 4 LITPCF 9
L+TPC+
Sbjct: 10 LLTPCY 15


>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)

Query: 4 LITPCF 9
L+TPC+
Sbjct: 10 LLTPCY 15


>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)

Query: 4 LITPCF 9
L+TPC+
Sbjct: 10 LLTPCY 15


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 4 LITPC 8
L+TPC
Sbjct: 2427 LVTPC 2431


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 4 LITPC 8
L+TPC
Sbjct: 2435 LVTPC 2439


>sp|TRX2_HHV2H|TRIPLEX capsid protein 2|Human herpesvirus 2 (strain HG52)

Query: 4 LITPCFE 10
+IT CFE
Sbjct: 1 MITDCFE 7


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 4 LITPC 8
L+TPC
Sbjct: 2434 LVTPC 2438


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 4 LITPC 8
L+TPC
Sbjct: 2430 LVTPC 2434


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 4 LITPC 8
L+TPC
Sbjct: 2430 LVTPC 2434


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 4 LITPC 8
+ITPC
Sbjct: 2442 IITPC 2446


>sp|VB18_VARV|ANKYRIN repeat protein B18|Variola virus

Query: 4 LITPCFE 10
+IT C+E
Sbjct: 456 IITKCYE 462


>sp|VB18_VAR67|ANKYRIN repeat protein B18|Variola virus (isolate Human/India/Ind3/1967)

Query: 4 LITPCFE 10
+IT C+E
Sbjct: 456 IITKCYE 462




25|SequenceR|130|121|CARSDLQQLI

>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)

Query: 1 CARSDLQQLI 10
CA+ QQLI
Sbjct: 1743 CAQDSFQQLI 1752


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 2 ARSDLQQLI 10
A+SD+ QL+
Sbjct: 392 AQSDMDQLL 400




26|SequenceR|135|126|QNESTCARSD

>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)

Query: 4 STCARS 9
STCARS
Sbjct: 18 STCARS 23


>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)

Query: 4 STCARS 9
STCARS
Sbjct: 18 STCARS 23


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 5 TCARS 9
TCARS
Sbjct: 582 TCARS 586


>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)

Query: 5 TCARS 9
TCARS
Sbjct: 259 TCARS 263


>sp|REP_HCYV5|REPLICATION-ASSOCIATED protein|Human associated cyclovirus 1 (isolate

Query: 1 QNESTCARS 9
QN++ C++S
Sbjct: 84 QNQTYCSKS 92




27|SequenceR|140|131|NEENEQNEST

>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 NEENEQN 7
NEE+E+N
Sbjct: 2771 NEEDERN 2777


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 NEENEQN 7
NEE+E+N
Sbjct: 2771 NEEDERN 2777


>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)

Query: 3 ENEQNEST 10
ENEQ+ES
Sbjct: 711 ENEQDESI 718


>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)

Query: 1 NEENEQNES 9
NE+ ++NE+
Sbjct: 82 NEQQKKNEN 90


>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)

Query: 1 NEENEQNES 9
NE+ ++NE+
Sbjct: 82 NEQQKKNEN 90




28|SequenceR|145|136|EETQENEENE

>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2 ETQENEENE 10
E+Q NEE+E
Sbjct: 2767 ESQGNEEDE 2775


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2 ETQENEENE 10
E+Q NEE+E
Sbjct: 2767 ESQGNEEDE 2775


>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)

Query: 3 TQENEE 8
TQENEE
Sbjct: 251 TQENEE 256


>sp|SPIKE_ADE12|FIBER protein|Human adenovirus A serotype 12

Query: 1 EETQENEE 8
EET+EN++
Sbjct: 10 EETEENDD 17


>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1 EETQENEENE 10
E+T E+ +NE
Sbjct: 456 EDTDEDSDNE 465


>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 EETQENEENE 10
E+T E+ +NE
Sbjct: 466 EDTDEDSDNE 475


>sp|NEF_HV196|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 EETQENEEN 9
EET E E+N
Sbjct: 163 EETTEGEDN 171




29|SequenceR|150|141|ASPRGEETQE

>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus

Query: 1 ASPRGEET 8
SP GEET
Sbjct: 615 GSPEGEET 622


>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate

Query: 1 ASPRGEET 8
SP GEET
Sbjct: 615 GSPEGEET 622


>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)

Query: 1 ASPRGEET 8
SP GEET
Sbjct: 614 GSPEGEET 621


>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)

Query: 1 ASPRGEET 8
SP GEET
Sbjct: 614 GSPEGEET 621


>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)

Query: 2 SPRGEETQ 9
+P+G++TQ
Sbjct: 7 TPQGQKTQ 14


>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 SPRGEETQ 9
+P+G++TQ
Sbjct: 7 TPQGQKTQ 14


>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)

Query: 2 SPRGEET 8
SP+G+E+
Sbjct: 548 SPKGQES 554


>sp|VE4_HPV41|PROTEIN E4|Human papillomavirus type 41

Query: 1 ASPRGEETQ 9
A PRG E Q
Sbjct: 7 APPRGREPQ 15




30|SequenceR|155|146|GWVEVASPRG

>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2

Query: 2 WVEVASPRG 10
WVE P G
Sbjct: 165 WVEFTLPEG 173


>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 1 GWVEVASPR 9
GW + +SP+
Sbjct: 789 GWGDTSSPK 797


>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5

Query: 2 WVEVASPRG 10
WVE P G
Sbjct: 165 WVEFTLPEG 173


>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)

Query: 2 WVEVASP 8
W+E+A+P
Sbjct: 773 WLELATP 779


>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 1 GWVEVASP 8
GWV SP
Sbjct: 392 GWVNETSP 399


>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)

Query: 2 WVEVASP 8
W+E+A+P
Sbjct: 773 WLELATP 779


>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)

Query: 1 GWVEVASP 8
GWV SP
Sbjct: 391 GWVNETSP 398


>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great

Query: 1 GWVEVASP 8
GWV SP
Sbjct: 379 GWVNETSP 386


>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)

Query: 1 GWVEVASP 8
GWV SP
Sbjct: 379 GWVNETSP 386


>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann

Query: 1 GWVEVASP 8
GWV SP
Sbjct: 392 GWVNETSP 399


>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)

Query: 2 WVEVASP 8
W+++ASP
Sbjct: 760 WLQLASP 766


>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)

Query: 1 GWVEVASP 8
GWV SP
Sbjct: 379 GWVNETSP 386


>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)

Query: 1 GWVEVASP 8
GWV SP
Sbjct: 379 GWVNETSP 386


>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)

Query: 1 GWVEVASP 8
GWV SP
Sbjct: 379 GWVNETSP 386


>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)

Query: 1 GWVEVASP 8
GWV SP
Sbjct: 379 GWVNETSP 386


>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)

Query: 1 GWVEVASP 8
GWV SP
Sbjct: 378 GWVNETSP 385


>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)

Query: 1 GWVEVASP 8
GWV SP
Sbjct: 379 GWVNETSP 386


>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)

Query: 1 GWVEVASP 8
GWV SP
Sbjct: 378 GWVNETSP 385


>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)

Query: 1 GWVEVASP 8
GWV SP
Sbjct: 378 GWVNETSP 385


>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)

Query: 1 GWVEVASP 8
GWV SP
Sbjct: 385 GWVNETSP 392


>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)

Query: 1 GWVEVASP 8
GWV SP
Sbjct: 378 GWVNETSP 385


>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)

Query: 1 GWVEVASP 8
GWV SP
Sbjct: 385 GWVNETSP 392


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 2 WVEVASP 8
W+ ASP
Sbjct: 735 WISFASP 741


>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus

Query: 2 WVEVA 6
WVEVA
Sbjct: 365 WVEVA 369


>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate

Query: 2 WVEVA 6
WVEVA
Sbjct: 365 WVEVA 369


>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 WVEVA 6
WVEVA
Sbjct: 365 WVEVA 369


>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 2 WVEVA 6
WVEVA
Sbjct: 365 WVEVA 369


>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)

Query: 2 WVEVA 6
WVEVA
Sbjct: 365 WVEVA 369


>sp|UL148_HCMVM|MEMBRANE protein UL148|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 VEVASPRG 10
VE+ PRG
Sbjct: 219 VEILKPRG 226


>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)

Query: 2 WVEVASP 8
W+E A+P
Sbjct: 774 WLEFAAP 780


>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)

Query: 2 WVEVASP 8
W+E A+P
Sbjct: 774 WLEFAAP 780


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 2 WVEVASP 8
WV+V SP
Sbjct: 1826 WVQVMSP 1832


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 2 WVEVASP 8
WV+V SP
Sbjct: 1826 WVQVMSP 1832


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 2 WVEVASP 8
WV+V SP
Sbjct: 1826 WVQVMSP 1832


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 2 WVEVASP 8
WV+V SP
Sbjct: 1826 WVQVMSP 1832


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 2 WVEVASP 8
WV+V SP
Sbjct: 1826 WVQVMSP 1832


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 2 WVEVASP 8
WV+V SP
Sbjct: 1826 WVQVMSP 1832


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 2 WVEVASP 8
WV+V SP
Sbjct: 1826 WVQVMSP 1832


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 2 WVEVASP 8
WV+V SP
Sbjct: 1826 WVQVMSP 1832


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 2 WVEVASP 8
WV+V SP
Sbjct: 1826 WVQVMSP 1832




31|SequenceR|160|151|CLLGYGWVEV

>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 2 LLGYGWVE 9
++GY W++
Sbjct: 1910 MMGYAWID 1917


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 2 LLGYGWVE 9
++GY W++
Sbjct: 1909 MMGYAWID 1916


>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWSEI 293


>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 287 LGYKWSEI 294


>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 LGYGWVEV 10
LGY W E+
Sbjct: 286 LGYKWPEI 293


>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 307 CLSGEGW 313


>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 307 CLSGEGW 313


>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 307 CLSGEGW 313


>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 306 CLSGEGW 312


>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 307 CLSGEGW 313


>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 4 GYGWV 8
GYGW+
Sbjct: 248 GYGWM 252


>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4 GYGWV 8
GYGW+
Sbjct: 248 GYGWM 252


>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human

Query: 1 CLLGYGWVE 9
CL+ WVE
Sbjct: 469 CLMHQDWVE 477


>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus

Query: 1 CLLGYGWVE 9
CL+ WVE
Sbjct: 469 CLMHQDWVE 477


>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human

Query: 1 CLLGYGWVE 9
CL+ WVE
Sbjct: 469 CLMHQDWVE 477


>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 307 CLSGDGW 313


>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 306 CLSGDGW 312


>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 311 CLSGDGW 317


>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 311 CLSGDGW 317


>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 1 CLLGYGW 7
CL G GW
Sbjct: 306 CLSGDGW 312


>sp|GD_CHV1|ENVELOPE glycoprotein D|Cercopithecine herpesvirus 1 (CeHV-1) (Simian

Query: 6 GWVEV 10
GWVEV
Sbjct: 197 GWVEV 201


>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human

Query: 1 CLLGYGWVE 9
CL+ WVE
Sbjct: 469 CLMHQDWVE 477


>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)

Query: 1 CLLGYGWV 8
CL GY +V
Sbjct: 61 CLFGYTFV 68


>sp|UL109_HCMVA|UNCHARACTERIZED protein UL109|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 CLLGYGW 7
C L +GW
Sbjct: 85 CALPHGW 91


>sp|DNLI_VARV|DNA ligase|Variola virus

Query: 3 LGYGWV 8
LGYG++
Sbjct: 79 LGYGYI 84


>sp|DNLI_VAR67|DNA ligase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3 LGYGWV 8
LGYG++
Sbjct: 79 LGYGYI 84


>sp|DNLI_VACCC|DNA ligase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 LGYGWV 8
LGYG++
Sbjct: 79 LGYGYI 84


>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)

Query: 3 LGYGWV 8
LGYG++
Sbjct: 79 LGYGYI 84


>sp|DNLI_MONPV|DNA ligase|Monkeypox virus (MPXV)

Query: 3 LGYGWV 8
LGYG++
Sbjct: 81 LGYGYI 86


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1 CLLGYGW 7
CLL + W
Sbjct: 798 CLLDHAW 804


>sp|UL138_HCMVM|PROTEIN UL138|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 CLLGYGW 7
C L Y W
Sbjct: 25 CYLAYHW 31


>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 1 CLLGYGW 7
C L GW
Sbjct: 931 CYLSIGW 937


>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)

Query: 4 GYGWVEV 10
GY W +V
Sbjct: 177 GYTWTDV 183


>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)

Query: 4 GYGWVEV 10
GY W +V
Sbjct: 177 GYTWTDV 183


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 1 CLLGYGW 7
CLL + W
Sbjct: 798 CLLDHAW 804


>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)

Query: 1 CLLGYGWV 8
C+L YG V
Sbjct: 349 CMLEYGAV 356


>sp|PG070_VARV|PROTEIN OPG070|Variola virus

Query: 4 GYGWV 8
YGW+
Sbjct: 45 AYGWI 49


>sp|PG070_VAR67|PROTEIN OPG070|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 4 GYGWV 8
YGW+
Sbjct: 45 AYGWI 49


>sp|PG070_VACCC|PROTEIN OPG070|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4 GYGWV 8
YGW+
Sbjct: 45 AYGWI 49


>sp|PG070_MONPV|PROTEIN OPG070|Monkeypox virus (MPXV)

Query: 4 GYGWV 8
YGW+
Sbjct: 45 AYGWI 49


>sp|US18_HCMVT|TRANSMEMBRANE protein HWLF5|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 3 LGYGW 7
+GYGW
Sbjct: 168 IGYGW 172


>sp|US18_HCMVM|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 LGYGW 7
+GYGW
Sbjct: 168 IGYGW 172


>sp|US18_HCMVA|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 LGYGW 7
+GYGW
Sbjct: 168 IGYGW 172


>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P

Query: 5 YGWV 8
YGW+
Sbjct: 670 YGWI 673


>sp|UL120_HCMVA|UNCHARACTERIZED protein UL120|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 LGYGWVE 9
+G GW E
Sbjct: 28 IGIGWYE 34


>sp|UL09_HCMVA|UNCHARACTERIZED protein UL9|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 LLGYGWV 8
L YGWV
Sbjct: 114 LYTYGWV 120


>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United

Query: 1 CLLGYGWV 8
CLL WV
Sbjct: 450 CLLPQEWV 457


>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 1 CLLGYGWV 8
C LG WV
Sbjct: 1417 CKLGGEWV 1424




32|SequenceR|165|156|SIVTVCLLGY

>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)

Query: 3 VTVCLLG 9
VT CLLG
Sbjct: 93 VTFCLLG 99


Query: 1 SIVTVCLLG 9
+++T CLLG
Sbjct: 35 ALLTNCLLG 43


>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)

Query: 3 VTVCLLG 9
VT CLLG
Sbjct: 91 VTFCLLG 97


>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 5 VCLLGY 10
VCLLG+
Sbjct: 191 VCLLGF 196


>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 5 VCLLGY 10
VCLLG+
Sbjct: 191 VCLLGF 196


>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain

Query: 2 IVTVCLLGY 10
+VT C+L +
Sbjct: 85 VVTACMLSF 93


>sp|MATRX_MUMPS|MATRIX protein|Mumps virus (strain SBL) (MuV)

Query: 2 IVTVCLLGY 10
+VT C+L +
Sbjct: 85 VVTACMLSF 93


>sp|MATRX_MUMPM|MATRIX protein|Mumps virus genotype B (strain

Query: 2 IVTVCLLGY 10
+VT C+L +
Sbjct: 85 VVTACMLSF 93


>sp|MATRX_MUMPJ|MATRIX protein|Mumps virus genotype A (strain

Query: 2 IVTVCLLGY 10
+VT C+L +
Sbjct: 85 VVTACMLSF 93


>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)

Query: 2 IVTVCLLGY 10
+VT C+L +
Sbjct: 85 VVTACMLSF 93


>sp|VME1_CVHNL|MEMBRANE protein|Human coronavirus NL63 (HCoV-NL63)

Query: 1 SIVTVCL 7
SI+T+CL
Sbjct: 85 SIITLCL 91


>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 IVTVCLLGY 10
++T C+ GY
Sbjct: 663 LLTQCIRGY 671




33|SequenceR|170|161|LLSCLSIVTV

>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)

Query: 1 LLSCLSI 7
LLSCL+I
Sbjct: 181 LLSCLTI 187


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1 LLSCLSIVT 9
LLSCL++ T
Sbjct: 181 LLSCLTVPT 189


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 2 LSCLSIV 8
LSCLSI+
Sbjct: 2505 LSCLSIM 2511


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 3 SCLSIVTV 10
+CL++VT+
Sbjct: 1461 ACLAVVTI 1468


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 2 LSCLSI 7
LSCLSI
Sbjct: 2508 LSCLSI 2513


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 2 LSCLSI 7
LSCLSI
Sbjct: 2508 LSCLSI 2513


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 LLSCLSI 7
LLSCL+I
Sbjct: 181 LLSCLTI 187


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 LLSCLSI 7
LLSCL+I
Sbjct: 181 LLSCLTI 187


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 LLSCLSI 7
LLSCL+I
Sbjct: 181 LLSCLTI 187


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 LLSCLSI 7
LLSCL+I
Sbjct: 181 LLSCLTI 187


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 LLSCLSI 7
LLSCL+I
Sbjct: 181 LLSCLTI 187


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 LLSCLSI 7
LLSCL+I
Sbjct: 181 LLSCLTI 187


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 1 LLSCLSI 7
LLSC+S+
Sbjct: 181 LLSCMSV 187


>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)

Query: 1 LLSCLSI 7
LLSCL++
Sbjct: 181 LLSCLTV 187


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 1 LLSCLSI 7
LLSCL++
Sbjct: 181 LLSCLTV 187


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 1 LLSCLSI 7
LLSCL++
Sbjct: 181 LLSCLTV 187


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1 LLSCLSI 7
LLSCL++
Sbjct: 181 LLSCLTV 187


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 1 LLSCLSI 7
LLSC+S+
Sbjct: 181 LLSCISV 187


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 3 SCLSIVTV 10
+C++I+TV
Sbjct: 664 ACVAIITV 671


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1 LLSCLSI 7
LLSCL++
Sbjct: 181 LLSCLTV 187


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1 LLSCLSI 7
LLSCL++
Sbjct: 181 LLSCLTV 187


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1 LLSCLSI 7
LLSCL++
Sbjct: 181 LLSCLTV 187


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 LLSCLSI 7
LLSCL++
Sbjct: 181 LLSCLTV 187


>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2

Query: 1 LLSCLSIVT 9
L SC S+VT
Sbjct: 1275 LASCDSVVT 1283


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1 LLSCLSI 7
LLSC+++
Sbjct: 181 LLSCITV 187


>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)

Query: 1 LLSCLSI 7
LLSC+++
Sbjct: 181 LLSCITV 187




34|SequenceR|175|166|VVSAGLLSCL

>sp|HBZ_HTL1A|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1

Query: 2 VSAGLLSCL 10
VSAGL CL
Sbjct: 5 VSAGLFRCL 13


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 1 VVSAGLLSC 9
V++AGL++C
Sbjct: 1358 VMAAGLMAC 1366


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 3 SAGLLSC 9
SAG LSC
Sbjct: 514 SAGFLSC 520


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 1 VVSAGLLSC 9
+++AGL++C
Sbjct: 1356 ILAAGLMAC 1364


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 1 VVSAGLLSC 9
+++AGL++C
Sbjct: 1360 ILAAGLIAC 1368


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 3 SAGLLSC 9
SAG LSC
Sbjct: 514 SAGYLSC 520


>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 2 VSAGLLSCL 10
V++G+L CL
Sbjct: 693 VASGILPCL 701


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 1 VVSAGLLSC 9
+++AGL++C
Sbjct: 1360 ILAAGLVAC 1368


>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)

Query: 2 VSAGLLSCL 10
V GLL CL
Sbjct: 828 VQHGLLPCL 836


>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)

Query: 2 VSAGLLSCL 10
V GLL CL
Sbjct: 828 VQHGLLPCL 836


>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)

Query: 2 VSAGLLSCL 10
V GLL CL
Sbjct: 823 VQHGLLPCL 831


>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)

Query: 2 VSAGLLSCL 10
V GLL CL
Sbjct: 823 VQHGLLPCL 831


>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)

Query: 2 VSAGLLSCL 10
V GLL CL
Sbjct: 823 VQHGLLPCL 831


>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)

Query: 2 VSAGLLSCL 10
V GLL CL
Sbjct: 823 VQHGLLPCL 831


>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)

Query: 4 AGLLSC 9
AGLL+C
Sbjct: 1043 AGLLAC 1048


>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)

Query: 4 AGLLSC 9
AGLL+C
Sbjct: 1043 AGLLAC 1048


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 5 GLLSCL 10
G+LSCL
Sbjct: 149 GVLSCL 154


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 5 GLLSCL 10
G+LSCL
Sbjct: 149 GVLSCL 154


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 5 GLLSCL 10
G+LSCL
Sbjct: 149 GVLSCL 154


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 5 GLLSCL 10
G+LSCL
Sbjct: 149 GVLSCL 154


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 5 GLLSCL 10
G+LSCL
Sbjct: 149 GVLSCL 154


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 5 GLLSCL 10
G+LSCL
Sbjct: 149 GVLSCL 154


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 5 GLLSCL 10
G+LSCL
Sbjct: 149 GVLSCL 154


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired

Query: 5 GLLSCL 10
G+LSCL
Sbjct: 150 GVLSCL 155


>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 1 VVSAGLL 7
++SAGLL
Sbjct: 1891 IISAGLL 1897


>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 1 VVSAGLL 7
++SAGLL
Sbjct: 1891 IISAGLL 1897


>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 1 VVSAGLL 7
++SAGLL
Sbjct: 1891 IISAGLL 1897


>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P

Query: 3 SAGLLSCL 10
S+G ++CL
Sbjct: 671 SSGFIACL 678


>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)

Query: 1 VVSAGLLSCL 10
+VS +LSCL
Sbjct: 346 IVSRNVLSCL 355


>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)

Query: 4 AGLLSCL 10
+GLL CL
Sbjct: 45 SGLLHCL 51


>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant

Query: 4 AGLLSCL 10
+GLL CL
Sbjct: 45 SGLLHCL 51


>sp|NSP5_ROTHT|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/United

Query: 2 VSAGLLSCL 10
VSA L SC+
Sbjct: 118 VSANLDSCI 126


>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P

Query: 4 AGLLSCL 10
+GL++CL
Sbjct: 1062 SGLITCL 1068


>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 4 AGLLSCL 10
AG+++CL
Sbjct: 440 AGVINCL 446


>sp|NSP5_ROTHP|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/United

Query: 2 VSAGLLSCL 10
VSA L SC+
Sbjct: 118 VSANLDSCI 126




35|SequenceR|180|171|KKMFPVVSAG

>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)

Query: 1 KKMFPVVS 8
KK+FP S
Sbjct: 296 KKLFPTTS 303


>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain

Query: 1 KKMFPVVS 8
KK+FP S
Sbjct: 296 KKLFPTTS 303


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 4 FPVVSAG 10
FP+ SAG
Sbjct: 5051 FPLCSAG 5057


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 4 FPVVSAG 10
FP+ SAG
Sbjct: 5076 FPLCSAG 5082


>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 2 KMF--PVVSAG 10
K+F P++SAG
Sbjct: 1885 KLFINPIISAG 1895


>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 2 KMF--PVVSAG 10
K+F P++SAG
Sbjct: 1885 KLFINPIISAG 1895


>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 2 KMF--PVVSAG 10
K+F P++SAG
Sbjct: 1885 KLFINPIISAG 1895




36|SequenceR|185|176|RKYFTKKMFP

>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 KYFTKKMFP 10
KY++K FP
Sbjct: 918 KYWSKVSFP 926


>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 RKYFTKKMF 9
R YFT++ +
Sbjct: 316 RTYFTRETY 324


>sp|PG132_VACCC|VIRION morphogenesis protein OPG132|Vaccinia virus (strain Copenhagen)

Query: 4 FTKKMFP 10
F KKM P
Sbjct: 236 FVKKMLP 242


>sp|PG132_MONPV|VIRION morphogenesis protein OPG132|Monkeypox virus (MPXV)

Query: 4 FTKKMFP 10
F KKM P
Sbjct: 236 FVKKMLP 242


>sp|PG132_VARV|VIRION morphogenesis protein OPG132|Variola virus

Query: 4 FTKKMFP 10
F KKM P
Sbjct: 236 FVKKMLP 242


>sp|PG132_VAR67|VIRION morphogenesis protein OPG132|Variola virus (isolate

Query: 4 FTKKMFP 10
F KKM P
Sbjct: 236 FVKKMLP 242


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 RKYFTKK 7
+ YFTKK
Sbjct: 4523 QSYFTKK 4529


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 5 TKKMFP 10
TKK FP
Sbjct: 1145 TKKAFP 1150


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 KYFTKKMFP 10
KY++K FP
Sbjct: 918 KYWSKVNFP 926


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 KYFTKKMFP 10
KY++K FP
Sbjct: 918 KYWSKVNFP 926


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 KYFTKKMFP 10
KY++K FP
Sbjct: 918 KYWSKVNFP 926


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 KYFTKKMFP 10
KY++K FP
Sbjct: 918 KYWSKVNFP 926


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 5 TKKMFP 10
TKK FP
Sbjct: 1145 TKKAFP 1150


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 KYFTKKMFP 10
KY++K FP
Sbjct: 912 KYWSKVNFP 920


>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1

Query: 5 TKKMFP 10
TKK+FP
Sbjct: 656 TKKLFP 661


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 1 RKYFTKKMF 9
+KY KK+F
Sbjct: 1843 QKYGVKKLF 1851




37|SequenceR|190|181|FYLLLRKYFT

>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 3 LLLRKYFT 10
+LLR YFT
Sbjct: 1680 MLLRSYFT 1687


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 3 LLLRKYFT 10
+LLR YFT
Sbjct: 1687 MLLRSYFT 1694


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 3 LLLRKYFT 10
+LLR YFT
Sbjct: 1687 MLLRSYFT 1694


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 3 LLLRKYFT 10
+LLR YFT
Sbjct: 1683 MLLRSYFT 1690


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 FYLLLRKYFT 10
FY LRK+F+
Sbjct: 5114 FYAYLRKHFS 5123


Query: 1 FYLLLRKYFT 10
FYL L YFT
Sbjct: 3085 FYLYLTFYFT 3094


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1 FYLLLRKYFT 10
FYL L YFT
Sbjct: 3085 FYLYLTFYFT 3094


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 FYLLLRKYFT 10
FY LRK+F+
Sbjct: 5137 FYAYLRKHFS 5146


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 4 LLRKYF 9
LLRKYF
Sbjct: 1684 LLRKYF 1689


>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus

Query: 1 FYLLLRKYF 9
+Y+++R YF
Sbjct: 274 YYIIVRVYF 282


>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1 FYLLLRKYF 9
+Y+++R YF
Sbjct: 274 YYIIVRVYF 282


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 2 YLLLRKYF 9
+ LL+KYF
Sbjct: 452 FSLLKKYF 459


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 2 YLLLRKYF 9
+ LL+KYF
Sbjct: 451 FSLLKKYF 458


>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 2 YLLLRK 7
YL+LRK
Sbjct: 553 YLILRK 558


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 YLLLRK 7
YL+LRK
Sbjct: 553 YLILRK 558


>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1

Query: 2 YLLLRKYF 9
Y+L+ KYF
Sbjct: 460 YVLIDKYF 467


>sp|VL2_HPV13|MINOR capsid protein L2|Human papillomavirus 13

Query: 1 FYLLLRKYFT 10
FYL YFT
Sbjct: 438 FYLYPTWYFT 447


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1 FYLLLRKYFT 10
FY+ KYFT
Sbjct: 1824 FYVKDGKYFT 1833


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1 FYLLLRKYFT 10
FY+ KYFT
Sbjct: 1824 FYVKDGKYFT 1833




38|SequenceR|195|186|IALAIFYLLL

>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980

Query: 1 IALAIFYLLL 10
IAL+IF LL+
Sbjct: 15 IALSIFNLLI 24


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 4 AIFYLLL 10
AIFYLL+
Sbjct: 710 AIFYLLI 716


>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)

Query: 1 IALAIFYLLL 10
IAL IF LLL
Sbjct: 1117 IALFIFSLLL 1126


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 3 LAIFYL 8
LAIFYL
Sbjct: 2494 LAIFYL 2499


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 5 IFYLLL 10
IFYLLL
Sbjct: 2221 IFYLLL 2226


>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)

Query: 4 AIFYLL 9
A+FYLL
Sbjct: 625 AVFYLL 630


>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)

Query: 4 AIFYLL 9
A+FYLL
Sbjct: 625 AVFYLL 630


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 4 AIFYLL 9
AIFYL+
Sbjct: 2785 AIFYLI 2790


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 4 AIFYLL 9
AIFYL+
Sbjct: 2785 AIFYLI 2790


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 IALAIFY 7
I LA+FY
Sbjct: 5589 IGLAVFY 5595




39|SequenceR|200|191|SYLTGIALAI

>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)

Query: 2 YLTGIALAI 10
Y+TG ALAI
Sbjct: 125 YITGFALAI 133


>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)

Query: 3 LTGIALAI 10
L G+ALAI
Sbjct: 690 LCGVALAI 697




40|SequenceR|205|196|QFLANSYLTG

>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1 QFLANSYLTG 10
Q L+NSY+T
Sbjct: 8 QLLSNSYVTN 17


>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1 QFLANSYLTG 10
Q L+NSY+T
Sbjct: 8 QLLSNSYVTN 17


>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 QFLANSYLTG 10
Q L+NSY+T
Sbjct: 8 QLLSNSYVTN 17


>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 QFLANSYLTG 10
Q L+NSY+T
Sbjct: 8 QLLSNSYVTN 17


>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United

Query: 1 QFLANSYLTG 10
Q L+NSY+T
Sbjct: 7 QLLSNSYVTN 16


>sp|UNG_HHV8P|URACIL-DNA glycosylase|Human herpesvirus 8 type P

Query: 3 LANSYLT 9
LAN YLT
Sbjct: 235 LANDYLT 241


>sp|GM_HCMVA|ENVELOPE glycoprotein M|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 FLANSYLTG 10
FL+N Y TG
Sbjct: 290 FLSNEYRTG 298


>sp|GM_HCMVM|ENVELOPE glycoprotein M|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 FLANSYLTG 10
FL+N Y TG
Sbjct: 290 FLSNEYRTG 298


>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)

Query: 1 QFLANSYLT 9
QFL N Y++
Sbjct: 440 QFLPNEYIS 448




41|SequenceR|210|201|AEPILQFLAN

>sp|VIF_HV2KR|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 3 PILQFLA 9
P+LQFLA
Sbjct: 146 PLLQFLA 152


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra

Query: 1 AEPILQFL 8
A PIL+FL
Sbjct: 294 ASPILRFL 301


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 1 AEPILQFL 8
A PIL+FL
Sbjct: 295 ASPILRFL 302


>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b

Query: 2 EPILQFL 8
+PI+QFL
Sbjct: 441 KPIVQFL 447


>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a

Query: 2 EPILQFL 8
+PI+QFL
Sbjct: 441 KPIVQFL 447


>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59

Query: 2 EPILQFL 8
+PI+QFL
Sbjct: 434 KPIVQFL 440


>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44

Query: 2 EPILQFL 8
+PI+QFL
Sbjct: 435 KPIVQFL 441


>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28

Query: 2 EPILQFL 8
+PI+QFL
Sbjct: 453 KPIVQFL 459


>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13

Query: 2 EPILQFL 8
+PI+QFL
Sbjct: 438 KPIVQFL 444


>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11

Query: 2 EPILQFL 8
+PI+QFL
Sbjct: 441 KPIVQFL 447


>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10

Query: 2 EPILQFL 8
+PI+QFL
Sbjct: 472 KPIVQFL 478


>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66

Query: 2 EPILQFL 8
+PI+QFL
Sbjct: 421 KPIVQFL 427


>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70

Query: 3 PILQFL 8
PI+QFL
Sbjct: 443 PIVQFL 448


>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58

Query: 3 PILQFL 8
PI+QFL
Sbjct: 434 PIVQFL 439


>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45

Query: 3 PILQFL 8
PI+QFL
Sbjct: 434 PIVQFL 439


>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39

Query: 3 PILQFL 8
PI+QFL
Sbjct: 438 PIVQFL 443


>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30

Query: 3 PILQFL 8
PI+QFL
Sbjct: 423 PIVQFL 428


>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18

Query: 3 PILQFL 8
PI+QFL
Sbjct: 448 PIVQFL 453


>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee

Query: 4 ILQFLAN 10
IL+F+AN
Sbjct: 508 ILKFIAN 514


>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo

Query: 4 ILQFLAN 10
IL+F+AN
Sbjct: 508 ILKFIAN 514




42|SequenceR|215|206|PNFGFAEPIL

>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 2 NFGFAEPIL 10
+FG+ EPIL
Sbjct: 1712 SFGYLEPIL 1720


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 2 NFGFAEPIL 10
+FG+ EPIL
Sbjct: 1712 SFGYLEPIL 1720


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 2 NFGFAEPIL 10
+FG+ EPIL
Sbjct: 1712 SFGYLEPIL 1720


>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 PNFGFAEPIL 10
P++GF P+
Sbjct: 701 PSYGFPTPVF 710


>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930

Query: 3 FGFAEPIL 10
FG+ EPI+
Sbjct: 315 FGWKEPII 322


>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 NFGFAEPI 9
NFGF E I
Sbjct: 457 NFGFGEGI 464


>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977

Query: 3 FGFAEPIL 10
FG+ EPI+
Sbjct: 315 FGWKEPII 322


>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 1 PNFGFAE 7
P+FGFA+
Sbjct: 121 PHFGFAD 127


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 4 GFAEP 8
GFAEP
Sbjct: 988 GFAEP 992


>sp|NSP4_ROTHO|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain

Query: 4 GFAEPI 9
GF EPI
Sbjct: 84 GFQEPI 89


>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 3 FGFAEPI 9
+G+ EPI
Sbjct: 1104 YGYLEPI 1110


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 3 FGFAEPI 9
+G+ EPI
Sbjct: 1104 YGYLEPI 1110


>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 NFGFAEPI 9
+FGF E I
Sbjct: 468 SFGFGEEI 475


>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 NFGFAEPI 9
+FGF E I
Sbjct: 463 SFGFGEEI 470


>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 NFGFAEPI 9
+FGF E I
Sbjct: 460 SFGFGEEI 467


>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 NFGFAEPI 9
+FGF E I
Sbjct: 457 SFGFGEKI 464


>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 NFGFAEPI 9
+FGF E I
Sbjct: 465 SFGFGEEI 472


>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 NFGFAEPI 9
+FGF E I
Sbjct: 464 SFGFGEEI 471


>sp|GAG_HV1M2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 NFGFAEPI 9
+FGF E I
Sbjct: 461 SFGFGEEI 468


>sp|GAG_HV196|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 NFGFAEPI 9
+FGF E I
Sbjct: 457 SFGFGEEI 464




43|SequenceR|220|211|YYDELPNFGF

>sp|VP35_EBOZM|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 2 YDELPNFG 9
YD LP FG
Sbjct: 229 YDHLPGFG 236


>sp|VP35_EBOZ5|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 2 YDELPNFG 9
YD LP FG
Sbjct: 229 YDHLPGFG 236


>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 2 YDELPNFG 9
YD LP FG
Sbjct: 218 YDHLPGFG 225


>sp|VP35_EBORR|POLYMERASE cofactor VP35|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 2 YDELPNFG 9
YD LP FG
Sbjct: 218 YDHLPGFG 225


>sp|VP35_EBORE|POLYMERASE cofactor VP35|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 2 YDELPNFG 9
YD LP FG
Sbjct: 218 YDHLPGFG 225


>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 297 DELPNYCF 304


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 1 YYDELPNFG 9
+YD P FG
Sbjct: 769 FYDGYPTFG 777


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 1 YYDELPNFG 9
+YD P FG
Sbjct: 769 FYDGYPTFG 777


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 1 YYDELPNFG 9
+YD P FG
Sbjct: 769 FYDGYPTFG 777


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 1 YYDELPNFG 9
+YD P FG
Sbjct: 769 FYDGYPTFG 777


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 1 YYDELPNFG 9
+YD P FG
Sbjct: 769 FYDGYPTFG 777


>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 384 DELPNYCF 391


>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 408 DELPNYCF 415


>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 420 DELPNYCF 427


>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 376 DELPNYCF 383


>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 391 DELPNYCF 398


>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 381 DELPNYCF 388


>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 280 DELPNYCF 287


>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 397 DELPNYCF 404


>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 396 DELPNYCF 403


>sp|CAPSH_ADE01|HEXON protein|Human adenovirus C serotype 1

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 301 DELPNYCF 308


>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 401 DELPNYCF 408


>sp|CAPSH_ADE04|HEXON protein|Human adenovirus E serotype 4

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 290 DELPNYCF 297


>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8

Query: 3 DELPNFGF 10
DELPN+ F
Sbjct: 325 DELPNYCF 332


>sp|VME1_MERS1|MEMBRANE protein|Middle East respiratory syndrome-related coronavirus

Query: 2 YDELPN 7
YD LPN
Sbjct: 160 YDRLPN 165


>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 YDELPN 7
YDELP+
Sbjct: 733 YDELPS 738


>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 YDELPN 7
YDELP+
Sbjct: 732 YDELPS 737


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 2 YDELPNFGF 10
+DEL ++GF
Sbjct: 1011 HDELHDYGF 1019


>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Puerto

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Brevig

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Guinea

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_I01A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 508 ELPSFG 513


>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 507 ELPSFG 512


>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 507 ELPSFG 512


>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 4 ELPNFG 9
ELP+FG
Sbjct: 507 ELPSFG 512


>sp|VP7_ROTH7|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United

Query: 2 YDELPNF 8
YD++P F
Sbjct: 121 YDDIPTF 127


>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus

Query: 3 DELPNFGF 10
+E+P+F F
Sbjct: 691 EEIPDFAF 698


>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3 DELPNFGF 10
+E+P+F F
Sbjct: 691 EEIPDFAF 698


>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)

Query: 3 DELPNFGF 10
+E+P+F F
Sbjct: 691 EEIPDFAF 698


>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 DELPNFGF 10
+E+P+F F
Sbjct: 691 EEIPDFAF 698


>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 YDELPNF 8
+DEL NF
Sbjct: 486 FDELSNF 492


>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)

Query: 2 YDELPNF 8
+DEL NF
Sbjct: 486 FDELSNF 492


>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)

Query: 3 DELPNFG 9
+ELPN G
Sbjct: 916 EELPNIG 922


>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7

Query: 2 YDELPNFG 9
+++LPN G
Sbjct: 332 FEDLPNLG 339


>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 4 ELPNFG 9
E+P+FG
Sbjct: 507 EIPSFG 512


>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)

Query: 1 YYDELP 6
YY ELP
Sbjct: 268 YYFELP 273


Query: 2 YDELPNFGF 10
YD+ P F +
Sbjct: 253 YDKNPQFNY 261


>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 1 YYDELP 6
YY E+P
Sbjct: 686 YYSEVP 691


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 2 YDELPNFG 9
Y++LP+ G
Sbjct: 478 YEQLPHSG 485


>sp|MCES_YMTV5|MRNA-CAPPING enzyme small subunit|Yaba monkey tumor virus (strain

Query: 1 YYDELPN 7
+YD LP+
Sbjct: 18 FYDNLPD 24




44|SequenceR|225|216|ASKSVYYDEL

>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4 SVYYDEL 10
++YYDEL
Sbjct: 716 TLYYDEL 722


>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980

Query: 1 ASKSVYYD 8
A+ +VYYD
Sbjct: 200 ATATVYYD 207


>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain

Query: 2 SKSVYYDEL 10
SK VY D+L
Sbjct: 351 SKKVYLDKL 359


>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)

Query: 2 SKSVYYDEL 10
SK VY D+L
Sbjct: 351 SKKVYLDKL 359


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 4 SVYYDEL 10
SVY+D+L
Sbjct: 911 SVYFDQL 917


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 6 YYDEL 10
YYDEL
Sbjct: 330 YYDEL 334


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 6 YYDEL 10
YYDEL
Sbjct: 330 YYDEL 334


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 6 YYDEL 10
YYDEL
Sbjct: 330 YYDEL 334


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 6 YYDEL 10
YYDEL
Sbjct: 330 YYDEL 334


>sp|E413_ADE12|PROBABLE early E4 13 kDa|Human adenovirus A serotype 12

Query: 1 ASKSVYYD 8
A KSV YD
Sbjct: 92 ARKSVVYD 99




45|SequenceR|230|221|GGFVVASKSV

>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain

Query: 3 FVVASKSV 10
F+V SKSV
Sbjct: 67 FIVTSKSV 74


>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 GFVVASKSV 10
GF++ SKS+
Sbjct: 89 GFLLCSKSI 97


>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 1 GGFVVASKS 9
GG++VAS S
Sbjct: 551 GGWLVASGS 559


>sp|FUS_PI3H4|FUSION glycoprotein F0|Human parainfluenza 3 virus (strain

Query: 1 GGFVVASKSV 10
G +VA KSV
Sbjct: 166 GNLIVAIKSV 175




46|SequenceR|235|226|FFLYFGGFVV

>sp|SCAF_HHV8P|CAPSID scaffolding protein|Human herpesvirus 8 type P

Query: 3 LYFGGFV 9
LY GGFV
Sbjct: 5 LYVGGFV 11


>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 2 FLYFGGFVV 10
FLYF G +V
Sbjct: 389 FLYFAGQLV 397


>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 FLYFGGFVV 10
FLYF G +V
Sbjct: 389 FLYFAGQLV 397


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 FFLYFGGFV 9
FF Y GF+
Sbjct: 6924 FFTYLCGFI 6932


>sp|CXCL1_HCMVM|CHEMOKINE vCXCL1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 FFLYFGG 7
+FLY GG
Sbjct: 61 YFLYLGG 67


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 FFLYFGGFV 9
FF Y GF+
Sbjct: 6947 FFTYICGFI 6955


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1 FFLYFGGFV 9
FF Y GF+
Sbjct: 6606 FFTYINGFI 6614


>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27

Query: 1 FFLYFGGFVV 10
F Y GG ++
Sbjct: 80 LFTYLGGIII 89


>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)

Query: 1 FFLYFGGFV 9
+F++ GG+V
Sbjct: 637 YFIFGGGYV 645


>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)

Query: 1 FFLYFGGFV 9
+F++ GG+V
Sbjct: 637 YFIFGGGYV 645


>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain

Query: 5 FGGFVV 10
+GGFVV
Sbjct: 112 YGGFVV 117


>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 4 YFGGF 8
YFGGF
Sbjct: 778 YFGGF 782


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 1 FFLYFGGFVV 10
+F+Y G F V
Sbjct: 1881 YFVYKGAFSV 1890


>sp|MIR1_HHV8P|E3 ubiquitin-protein ligase MIR1|Human herpesvirus 8 type P

Query: 1 FFLYFGGFVV 10
FF+++ FVV
Sbjct: 126 FFVFYQLFVV 135


>sp|DNLI_VARV|DNA ligase|Variola virus

Query: 3 LYFGGF 8
LYF GF
Sbjct: 320 LYFDGF 325


>sp|DNLI_VAR67|DNA ligase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3 LYFGGF 8
LYF GF
Sbjct: 320 LYFDGF 325


>sp|DNLI_VACCC|DNA ligase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 LYFGGF 8
LYF GF
Sbjct: 320 LYFDGF 325


>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)

Query: 3 LYFGGF 8
LYF GF
Sbjct: 320 LYFDGF 325


>sp|DNLI_MONPV|DNA ligase|Monkeypox virus (MPXV)

Query: 3 LYFGGF 8
LYF GF
Sbjct: 322 LYFDGF 327


>sp|PG036_MONPV|PROTEIN OPG036|Monkeypox virus (MPXV)

Query: 4 YFGGFV 9
Y+GG+V
Sbjct: 89 YYGGYV 94


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 3 LYFGGF 8
LYF GF
Sbjct: 788 LYFDGF 793


>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 2 FLYFGGF 8
FL++GG
Sbjct: 172 FLHYGGL 178


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 FLYFGGF 8
FL++GG
Sbjct: 172 FLHYGGL 178


>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain

Query: 2 FLYFGGFV 9
F Y GGF+
Sbjct: 325 FSYNGGFL 332




47|SequenceR|240|231|IKETFFFLYF

>sp|CEP2_HHV11|CYTOPLASMIC envelopment protein 2|Human herpesvirus 1 (strain 17)

Query: 4 TFFFLYF 10
TFF L+F
Sbjct: 111 TFFALFF 117


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 5 FFFLY 9
FFFLY
Sbjct: 3603 FFFLY 3607


>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P

Query: 1 IKETFFFL 8
+ TFFFL
Sbjct: 172 VMHTFFFL 179


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 5 FFFLY 9
FFFLY
Sbjct: 3603 FFFLY 3607


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 2 KETFFFLYF 10
KET +FL+F
Sbjct: 2115 KETNWFLHF 2123


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 2 KETFFFLYF 10
KET +FL+F
Sbjct: 2115 KETNWFLHF 2123




48|SequenceR|245|236|LLIKLIKETF

>sp|NCAP_SFTSV|NUCLEOPROTEIN phlebovirus (isolate SFTSV/Human/China/HB29/2010) (Severe

Query: 1 LLIKLIKET 9
L+IK +KET
Sbjct: 37 LIIKKLKET 45


>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 2 LIKLIKETF 10
+I L+K TF
Sbjct: 314 VIDLVKSTF 322




49|SequenceR|250|241|ENKQKLLIKL

>sp|NCAP_TOSV|NUCLEOPROTEIN virus (Tos)

Query: 1 ENKQKLLIKL 10
E+K+KLLI +
Sbjct: 218 EDKKKLLIAV 227


>sp|TEG7_HHV6Z|TEGUMENT protein UL51 homolog|Human herpesvirus 6B (strain Z29)

Query: 1 ENKQKLLIKL 10
EN ++LL++L
Sbjct: 166 ENSKRLLVEL 175


>sp|TEG7_HHV6U|TEGUMENT protein UL51 homolog|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 ENKQKLLIKL 10
EN ++LL++L
Sbjct: 158 ENSKRLLVEL 167




50|SequenceR|255|246|HGHHHENKQK

>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I54A2|HEMAGGLUTININ A virus (strain A/Malaysia:Malaya/302/1954

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I51A0|HEMAGGLUTININ A virus (strain A/USA:Albany/12/1951

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 365 YGYHHQNEQ 373


>sp|HEMA_I79A4|HEMAGGLUTININ A virus (strain A/Kiev/59/1979

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I77AA|HEMAGGLUTININ A virus (strain A/Brazil/11/1978

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I40A0|HEMAGGLUTININ A virus (strain A/Hickox/1940

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I96A3|HEMAGGLUTININ A virus (strain A/China:Nanchang/11/1996

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 365 YGYHHQNEQ 373


>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 365 YGYHHQNEQ 373


>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 365 YGYHHQNEQ 373


>sp|HEMA_I96A2|HEMAGGLUTININ A virus (strain A/USA:Memphis/10/1996

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I80AA|HEMAGGLUTININ A virus (strain A/India/6263/1980

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930

Query: 1 HGHHHENKQ 9
+G+HH+N Q
Sbjct: 366 YGYHHQNGQ 374


>sp|HEMA_I77AB|HEMAGGLUTININ A virus (strain A/USSR/90/1977

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I83A1|HEMAGGLUTININ A virus (strain A/Chile/1/1983

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 365 YGYHHQNEQ 373


>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 365 YGYHHQNEQ 373


>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 365 YGYHHQNEQ 373


>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945

Query: 1 HGHHHENKQ 9
+G+HH+N+Q
Sbjct: 366 YGYHHQNEQ 374


>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967

Query: 1 HGHHHENKQ 9
+G+HH+N Q
Sbjct: 366 YGYHHQNGQ 374


>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961

Query: 1 HGHHHENKQ 9
+G+HH+N Q
Sbjct: 366 YGYHHQNGQ 374


>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 364 YGYHHSNEQ 372


>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 368 YGYHHSNEQ 376


>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 368 YGYHHSNEQ 376


>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 368 YGYHHSNEQ 376


>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 368 YGYHHSNEQ 376


>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 368 YGYHHSNEQ 376


>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 367 YGYHHSNEQ 375


>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 368 YGYHHSNEQ 376


>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 368 YGYHHSNEQ 376


>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 368 YGYHHSNEQ 376


>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 368 YGYHHSNEQ 376


>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 366 YGYHHSNEQ 374


>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 360 YGYHHSNEQ 368


>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 357 YGYHHSNEQ 365


>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968

Query: 1 HGHHHENKQ 9
+G+HH N Q
Sbjct: 362 YGYHHSNDQ 370


>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 357 YGYHHSNEQ 365


>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New

Query: 1 HGHHHENKQ 9
+G+HH N Q
Sbjct: 362 YGYHHSNDQ 370


>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957

Query: 1 HGHHHENKQ 9
+G+HH N Q
Sbjct: 362 YGYHHSNDQ 370


Query: 2 GHHHENKQK 10
G HH N +K
Sbjct: 191 GVHHPNDEK 199


>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957

Query: 1 HGHHHENKQ 9
+G+HH N Q
Sbjct: 362 YGYHHSNDQ 370


>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P

Query: 3 HHHENKQK 10
H+H+NK K
Sbjct: 788 HNHKNKSK 795


>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 1 HGHHHE 6
HGH HE
Sbjct: 673 HGHPHE 678


>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 364 YGYHHSNEQ 372


>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 368 YGYHHSNEQ 376


>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 357 YGYHHSNEQ 365


>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 HGHHHENKQ 9
+G+HH N+Q
Sbjct: 357 YGYHHSNEQ 365


>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 1 HGHHHE 6
HGH HE
Sbjct: 673 HGHPHE 678


>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)

Query: 1 HGHHHE 6
HGH HE
Sbjct: 673 HGHPHE 678


>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)

Query: 1 HGHHHE 6
HGH HE
Sbjct: 674 HGHPHE 679


>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)

Query: 1 HGHHHE 6
HGH HE
Sbjct: 674 HGHPHE 679


>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)

Query: 1 HGHHHE 6
HGH HE
Sbjct: 674 HGHPHE 679


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 4 HHENKQ 9
HHEN++
Sbjct: 5294 HHENEE 5299


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 4 HHENKQ 9
HHEN++
Sbjct: 5324 HHENEE 5329


>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 HHHEN 7
HHH N
Sbjct: 437 HHHRN 441


>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)

Query: 3 HHHEN 7
HHH N
Sbjct: 436 HHHRN 440


>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3 HHHEN 7
HHH N
Sbjct: 437 HHHRN 441


>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United

Query: 2 GHHHENK 8
G HH+N+
Sbjct: 392 GDHHQNE 398


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 1 HGHHHENKQ 9
HG H+E +
Sbjct: 21 HGSHNETRH 29


>sp|TRX2_EBVB9|TRIPLEX capsid protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 GHHHE 6
GHH+E
Sbjct: 183 GHHYE 187


>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African

Query: 1 HGHHHE 6
HGH HE
Sbjct: 674 HGHPHE 679


>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)

Query: 3 HHHENKQK 10
HH+ KQ+
Sbjct: 386 HHYGTKQR 393


>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)

Query: 3 HHHENKQK 10
HH+ KQ+
Sbjct: 389 HHYGTKQR 396


>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57

Query: 2 GHHHENKQ 9
GH + NKQ
Sbjct: 135 GHPYYNKQ 142


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate

Query: 1 HGHHHENKQ 9
HG H E+ +
Sbjct: 104 HGEHSESNR 112


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 1 HGHHHENKQ 9
HG H E+ +
Sbjct: 105 HGEHSESNR 113


>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)

Query: 2 GHHHEN 7
G HH N
Sbjct: 348 GQHHRN 353


>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)

Query: 2 GHHHEN 7
G HH N
Sbjct: 348 GQHHRN 353


>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G

Query: 1 HGHHH 5
HG HH
Sbjct: 354 HGEHH 358


>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 HHHE 6
HHHE
Sbjct: 354 HHHE 357


>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 HHHE 6
HHHE
Sbjct: 354 HHHE 357


>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1

Query: 1 HGHHH 5
HG HH
Sbjct: 355 HGQHH 359


>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)

Query: 2 GHHHEN 7
G HH N
Sbjct: 348 GQHHRN 353


>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1

Query: 1 HGHHH 5
HG HH
Sbjct: 355 HGQHH 359


>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)

Query: 2 GHHHEN 7
G HH N
Sbjct: 348 GQHHRN 353


>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)

Query: 2 GHHHEN 7
G HH N
Sbjct: 348 GQHHRN 353


>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)

Query: 2 GHHHEN 7
G HH N
Sbjct: 348 GQHHRN 353


>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)

Query: 2 GHHHEN 7
G HH N
Sbjct: 348 GQHHRN 353


>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2

Query: 1 HGHHH 5
HG HH
Sbjct: 357 HGEHH 361


>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2

Query: 1 HGHHH 5
HG HH
Sbjct: 355 HGQHH 359


>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3

Query: 1 HGHHH 5
HG HH
Sbjct: 357 HGEHH 361


>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)

Query: 2 GHHHEN 7
G HH N
Sbjct: 348 GQHHRN 353


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 2 GHHHENK 8
GHH E K
Sbjct: 1047 GHHGEVK 1053


>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975

Query: 2 GHHHENKQK 10
G HH N K
Sbjct: 197 GVHHPNTDK 205




51|SequenceR|260|251|SAYHSHGHHH

>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)

Query: 3 YHSHGH 8
YH HGH
Sbjct: 228 YHGHGH 233


Query: 6 HGHHH 10
HGH H
Sbjct: 229 HGHGH 233


>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 5 SHGHH 9
+HGHH
Sbjct: 39 AHGHH 43


>sp|NSP2_ROTJ1|NON-STRUCTURAL protein 2|Rotavirus X (strain

Query: 4 HSHGH 8
H HGH
Sbjct: 227 HGHGH 231


Query: 5 SHGHHH 10
+HGH H
Sbjct: 226 NHGHGH 231


>sp|NSP2_ROTB2|NON-STRUCTURAL protein 2|Rotavirus X (isolate

Query: 4 HSHGH 8
H HGH
Sbjct: 227 HGHGH 231


Query: 5 SHGHHH 10
+HGH H
Sbjct: 226 NHGHGH 231


>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor

Query: 1 SAYHSHGHH 9
S+YH H ++
Sbjct: 279 SSYHLHSYY 287


>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor

Query: 1 SAYHSHGHH 9
S+YH H ++
Sbjct: 279 SSYHLHSYY 287


>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor

Query: 1 SAYHSHGHH 9
S+YH H ++
Sbjct: 279 SSYHLHSYY 287


>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor

Query: 1 SAYHSHGHH 9
S+YH H ++
Sbjct: 279 SSYHLHSYY 287


>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor

Query: 1 SAYHSHGHH 9
S+YH H ++
Sbjct: 279 SSYHLHSYY 287


>sp|W_NIPAV|PROTEIN W|Nipah virus

Query: 3 YHSHG 7
YH HG
Sbjct: 116 YHDHG 120


>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 3 YHSHG 7
YH HG
Sbjct: 116 YHDHG 120


>sp|V_NIPAV|NON-STRUCTURAL protein V|Nipah virus

Query: 3 YHSHG 7
YH HG
Sbjct: 116 YHDHG 120


>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 3 YHSHG 7
YH HG
Sbjct: 116 YHDHG 120


>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus

Query: 3 YHSHG 7
YH HG
Sbjct: 116 YHDHG 120


>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)

Query: 3 YHSHG 7
YH HG
Sbjct: 116 YHDHG 120


>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)

Query: 4 HSHGHH 9
H H HH
Sbjct: 445 HPHVHH 450


>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)

Query: 4 HSHGHH 9
H H HH
Sbjct: 445 HPHVHH 450


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2 AYHSHGHH 9
+ H++ HH
Sbjct: 2915 SMHTYSHH 2922


>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 SAYHSH 6
SAYHS+
Sbjct: 265 SAYHSY 270


>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 SAYHSH 6
SAYHS+
Sbjct: 265 SAYHSY 270


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 YHSHGH 8
YH H H
Sbjct: 413 YHFHTH 418


>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)

Query: 3 YHSHGH 8
YH H H
Sbjct: 90 YHFHTH 95


>sp|VE6_HPV49|PROTEIN E6|Human papillomavirus type 49

Query: 1 SAYHSHGHHH 10
SAYH ++H
Sbjct: 65 SAYHEFTNYH 74




52|SequenceR|265|256|SPLSESAYHS

>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I71A1|NEURAMINIDASE A virus (strain A/Memphis/1/1971

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I68A4|NEURAMINIDASE A virus (strain A/Hong

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I68A0|NEURAMINIDASE A virus (strain A/Aichi/2/1968

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I68A6|NEURAMINIDASE A virus (strain A/Northern

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I69A0|NEURAMINIDASE A virus (strain A/England/878/1969

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I68A5|NEURAMINIDASE A virus (strain A/Korea/426/1968

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I82A7|NEURAMINIDASE A virus (strain A/Swine/Hong

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 243 SPLSGSAQH 251


>sp|NRAM_I70A0|NEURAMINIDASE A virus (strain A/Qu/7/1970

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I75A0|NEURAMINIDASE A virus (strain A/Beijing/39/1975

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I78A8|NEURAMINIDASE A virus (strain A/Memphis/18/1978

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I78A7|NEURAMINIDASE A virus (strain A/Memphis/2/1978

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I96A1|NEURAMINIDASE A virus (strain A/Niigata/137/1996

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I77A4|NEURAMINIDASE A virus (strain A/Swine/Colorado/1/1977

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I76AB|NEURAMINIDASE A virus (strain A/Swine/Hong

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I76A6|NEURAMINIDASE A virus (strain A/Memphis/110/1976

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I77AH|NEURAMINIDASE A virus (strain A/Texas/1/1977

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I75A3|NEURAMINIDASE A virus (strain A/Victoria/3/1975

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993

Query: 1 SPLSESAYH 9
SPLS SA H
Sbjct: 266 SPLSGSAQH 274


>sp|NRAM_I67A0|NEURAMINIDASE A virus (strain A/Tokyo/3/1967

Query: 1 SPLSESAYH 9
SPL+ SA H
Sbjct: 266 SPLAGSAQH 274


>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957

Query: 2 PLSESAYH 9
PLS SA H
Sbjct: 267 PLSGSAQH 274


>sp|US9_HHV11|ENVELOPE protein US9|Human herpesvirus 1 (strain 17)

Query: 1 SPLSESAYHS 10
SP+S AY+S
Sbjct: 25 SPVSVEAYYS 34


>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann

Query: 2 PLSESAYH 9
PLS SA H
Sbjct: 267 PLSGSAQH 274


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 1 SPLSESAY 8
SPLS SA+
Sbjct: 211 SPLSTSAF 218




53|SequenceR|270|261|EQDKKSPLSE

>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 EQDKKSPL 8
++++KSPL
Sbjct: 67 DENRKSPL 74


>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)

Query: 1 EQDKKSPL 8
++++KSPL
Sbjct: 67 DENRKSPL 74


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 2 QDKKSPLSE 10
D K PLSE
Sbjct: 1734 MDTKMPLSE 1742


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 2 QDKKSPLSE 10
D K PLSE
Sbjct: 1734 MDIKMPLSE 1742


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 2 QDKKSPLSE 10
D K PLSE
Sbjct: 1734 MDIKMPLSE 1742




54|SequenceR|275|266|EMVGEEQDKK

>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 MVGEEQDKK 10
M G EQDKK
Sbjct: 158 MTGLEQDKK 166


>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 EMVGEEQDK 9
E +GE QD+
Sbjct: 569 ETIGERQDR 577


>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 MVGEEQDKK 10
M G E+DKK
Sbjct: 161 MTGLERDKK 169


>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 MVGEEQDKK 10
M G E+DKK
Sbjct: 161 MTGLERDKK 169


>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 MVGEEQDKK 10
M G E+DKK
Sbjct: 167 MTGLERDKK 175


>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 MVGEEQDKK 10
M G E+DKK
Sbjct: 157 MTGLERDKK 165


>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 MVGEEQDKK 10
M G E+DKK
Sbjct: 164 MTGLERDKK 172


>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 MVGEEQDKK 10
M G E+DK+
Sbjct: 158 MTGLERDKR 166


>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 VGEEQDKK 10
+ EEQDK+
Sbjct: 262 LNEEQDKR 269


>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 VGEEQDKK 10
+ EEQDK+
Sbjct: 131 LNEEQDKR 138


>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 VGEEQDKK 10
+ EEQDK+
Sbjct: 362 LNEEQDKR 369


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 VGEEQDKK 10
+ EEQDK+
Sbjct: 362 LNEEQDKR 369


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 VGEEQDKK 10
+ EEQDK+
Sbjct: 362 LNEEQDKR 369


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 VGEEQDKK 10
+ EEQDK+
Sbjct: 362 LNEEQDKR 369


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 VGEEQDKK 10
+ EEQDK+
Sbjct: 362 LNEEQDKR 369


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 VGEEQDKK 10
+ EEQDK+
Sbjct: 362 LNEEQDKR 369


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 VGEEQDKK 10
+ EEQDK+
Sbjct: 362 LNEEQDKR 369


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 3 VGEEQDKK 10
+ EEQDK+
Sbjct: 362 LNEEQDKR 369


>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 MVGEEQDKK 10
M G E DKK
Sbjct: 158 MTGLELDKK 166


>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3 VGEEQDKK 10
+ EEQDK+
Sbjct: 82 LNEEQDKR 89




55|SequenceR|280|271|GNQLKEMVGE

>sp|SPI1_VARV|SERINE proteinase inhibitor 1|Variola virus

Query: 1 GNQLKEMVGE 10
NQ KE++ E
Sbjct: 123 ANQTKELINE 132


>sp|SPI1_VAR67|SERINE proteinase inhibitor 1|Variola virus (isolate

Query: 1 GNQLKEMVGE 10
NQ KE++ E
Sbjct: 123 ANQTKELINE 132


>sp|SPI1_VACCC|SERINE proteinase inhibitor 1|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 GNQLKEMVGE 10
NQ KE++ E
Sbjct: 104 ANQTKELINE 113


>sp|SPI1_MONPV|SERINE proteinase inhibitor 1|Monkeypox virus (MPXV)

Query: 1 GNQLKEMVGE 10
NQ KE++ E
Sbjct: 108 ANQTKELINE 117


>sp|SPI1_CWPXB|SERINE proteinase inhibitor 1|Cowpox virus (strain Brighton Red)

Query: 1 GNQLKEMVGE 10
NQ KE++ E
Sbjct: 106 ANQTKELINE 115


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 1 GNQLKEMVG 9
GN++ +M+G
Sbjct: 2243 GNRMYDMIG 2251


>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus

Query: 1 GNQLKEM 7
G+QLKE+
Sbjct: 181 GDQLKEL 187


>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 GNQLKEM 7
G+QLKE+
Sbjct: 181 GDQLKEL 187


>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 GNQLKEM 7
G+QLKE+
Sbjct: 181 GDQLKEL 187


>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)

Query: 1 GNQLKEM 7
G+QLKE+
Sbjct: 181 GDQLKEL 187


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 2 NQLKEMVGE 10
NQ++ ++GE
Sbjct: 3398 NQVRSVIGE 3406


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 4 LKEMVGE 10
+KE+VGE
Sbjct: 5464 IKEIVGE 5470


>sp|VPX_HV2D2|PROTEIN Vpx|Human immunodeficiency virus type 2

Query: 1 GNQLKEMVGE 10
GN +E VGE
Sbjct: 10 GNSDEETVGE 19


>sp|VPX_HV2D1|PROTEIN Vpx|Human immunodeficiency virus type 2

Query: 1 GNQLKEMVGE 10
GN +E +GE
Sbjct: 11 GNSGEETIGE 20


>sp|VPX_HV2G1|PROTEIN Vpx|Human immunodeficiency virus type 2

Query: 1 GNQLKEMVGE 10
GN +E +GE
Sbjct: 11 GNSGEETIGE 20


>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 NQLKEMVGE 10
N+LK+++G+
Sbjct: 1302 NELKKIIGQ 1310


>sp|VPX_HV2RO|PROTEIN Vpx|Human immunodeficiency virus type 2

Query: 1 GNQLKEMVGE 10
GN +E +GE
Sbjct: 11 GNSGEETIGE 20


>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 NQLKEMVGE 10
N+LK+++G+
Sbjct: 1305 NELKKIIGQ 1313


>sp|VPX_HV2ST|PROTEIN Vpx|Human immunodeficiency virus type 2

Query: 1 GNQLKEMVGE 10
GN +E +GE
Sbjct: 11 GNSGEETIGE 20


>sp|VPX_HV2UC|PROTEIN Vpx|Human immunodeficiency virus type 2

Query: 1 GNQLKEMVGE 10
GN +E +GE
Sbjct: 10 GNSDEETIGE 19


>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate

Query: 4 LKEMVGE 10
LK++VGE
Sbjct: 223 LKDIVGE 229


>sp|VPX_HV2EH|PROTEIN Vpx|Human immunodeficiency virus type 2

Query: 1 GNQLKEMVGE 10
GN +E VGE
Sbjct: 10 GNSGEETVGE 19




56|SequenceR|285|276|MHDLDGNQLK

>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)

Query: 1 MHDLDGNQL 9
+HDL+GNQ+
Sbjct: 81 IHDLEGNQI 89


>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)

Query: 1 MHDLDGNQL 9
+HDL+GNQ+
Sbjct: 79 IHDLEGNQI 87


>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)

Query: 1 MHDLDGNQL 9
+HDL+GNQ+
Sbjct: 79 IHDLEGNQI 87


>sp|POXIN_VACCC|POXIN virus (strain Copenhagen) (VACV)

Query: 1 MHDLDGNQL 9
+HD +GNQ+
Sbjct: 81 IHDQEGNQI 89


>sp|POXIN_VACCA|POXIN virus (strain Ankara) (VACV)

Query: 1 MHDLDGNQL 9
+HD +GNQ+
Sbjct: 81 IHDQEGNQI 89


>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 2 HDLDGNQL 9
HD+DG L
Sbjct: 335 HDVDGKDL 342


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 2 HDLDGNQL 9
HD+DG L
Sbjct: 334 HDVDGKDL 341


>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus

Query: 1 MHDLDGNQL 9
++D+DGN L
Sbjct: 603 VYDVDGNYL 611


>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 MHDLDGNQL 9
++D+DGN L
Sbjct: 603 VYDVDGNYL 611


>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)

Query: 1 MHDLDGNQL 9
++D+DGN L
Sbjct: 603 VYDVDGNYL 611


>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 MHDLDGNQL 9
++D+DGN L
Sbjct: 603 VYDVDGNYL 611


>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)

Query: 1 MHDLDGNQL 9
++D+DGN L
Sbjct: 603 VYDVDGNYL 611


>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10

Query: 4 LDGNQL 9
LDGNQ+
Sbjct: 572 LDGNQI 577


>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3

Query: 4 LDGNQL 9
LDGNQ+
Sbjct: 550 LDGNQV 555


>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human

Query: 1 MHDLDGN 7
+ DLDGN
Sbjct: 328 LADLDGN 334


>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain

Query: 2 HDLDGNQL 9
HD+ GN++
Sbjct: 597 HDVTGNRI 604


>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12

Query: 1 MHDLDGNQ 8
MH DG+Q
Sbjct: 87 MHHADGSQ 94


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 3 DLDGNQ 8
DLDGN
Sbjct: 275 DLDGNH 280


>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28

Query: 4 LDGNQL 9
LDGNQ+
Sbjct: 553 LDGNQV 558


>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus

Query: 4 LDGNQL 9
LDGN+L
Sbjct: 321 LDGNKL 326


>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 4 LDGNQL 9
LDGN+L
Sbjct: 321 LDGNKL 326


>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4 LDGNQL 9
LDGN+L
Sbjct: 321 LDGNKL 326


>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)

Query: 4 LDGNQL 9
LDGN+L
Sbjct: 321 LDGNKL 326




57|SequenceR|290|281|CHQPIMHDLD

>sp|VU4_HHV6Z|PROTEIN U4|Human herpesvirus 6B (strain Z29)

Query: 2 HQPIMHD 8
H PI+HD
Sbjct: 293 HLPILHD 299


>sp|HEMA_INBVM|HEMAGGLUTININ B virus (strain B/Victoria/19/1989)

Query: 4 PIMHD 8
PIMHD
Sbjct: 111 PIMHD 115


>sp|HEMA_INBVL|HEMAGGLUTININ B virus (strain B/Victoria/103/1989)

Query: 4 PIMHD 8
PIMHD
Sbjct: 111 PIMHD 115


>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)

Query: 4 PIMHD 8
PIMHD
Sbjct: 111 PIMHD 115


>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)

Query: 4 PIMHD 8
PIMHD
Sbjct: 104 PIMHD 108


>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)

Query: 4 PIMHD 8
PIMHD
Sbjct: 104 PIMHD 108


>sp|HEMA_INBTF|HEMAGGLUTININ B virus (strain B/Texas/4/1990)

Query: 4 PIMHD 8
PIMHD
Sbjct: 111 PIMHD 115


>sp|HEMA_INBTE|HEMAGGLUTININ B virus (strain B/Texas/1/1991)

Query: 4 PIMHD 8
PIMHD
Sbjct: 111 PIMHD 115


>sp|HEMA_INBSJ|HEMAGGLUTININ B virus (strain B/Singapore/1964)

Query: 4 PIMHD 8
PIMHD
Sbjct: 107 PIMHD 111


>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)

Query: 4 PIMHD 8
PIMHD
Sbjct: 111 PIMHD 115


>sp|HEMA_INBSD|HEMAGGLUTININ B virus (strain B/South

Query: 4 PIMHD 8
PIMHD
Sbjct: 111 PIMHD 115


>sp|HEMA_INBP9|HEMAGGLUTININ B virus (strain B/Panama/45/1990)

Query: 4 PIMHD 8
PIMHD
Sbjct: 111 PIMHD 115


>sp|HEMA_INBP3|HEMAGGLUTININ B virus (strain B/Paris/329/1990)

Query: 4 PIMHD 8
PIMHD
Sbjct: 111 PIMHD 115


>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)

Query: 4 PIMHD 8
PIMHD
Sbjct: 111 PIMHD 115


>sp|HEMA_INBNY|HEMAGGLUTININ B virus (strain B/New

Query: 4 PIMHD 8
PIMHD
Sbjct: 111 PIMHD 115


>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)

Query: 4 PIMHD 8
PIMHD
Sbjct: 104 PIMHD 108


>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)

Query: 4 PIMHD 8
PIMHD
Sbjct: 101 PIMHD 105


>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)

Query: 4 PIMHD 8
PIMHD
Sbjct: 111 PIMHD 115


>sp|HEMA_INBIN|HEMAGGLUTININ B virus (strain B/India/3/1989)

Query: 4 PIMHD 8
PIMHD
Sbjct: 111 PIMHD 115


>sp|HEMA_INB|HEMAGGLUTININ B virus (strain B/ID/1986)

Query: 4 PIMHD 8
PIMHD
Sbjct: 108 PIMHD 112


>sp|HEMA_INBHM|HEMAGGLUTININ B virus (strain B/Hong

Query: 4 PIMHD 8
PIMHD
Sbjct: 111 PIMHD 115


>sp|HEMA_INBHL|HEMAGGLUTININ B virus (strain B/Hong

Query: 4 PIMHD 8
PIMHD
Sbjct: 111 PIMHD 115


>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong

Query: 4 PIMHD 8
PIMHD
Sbjct: 104 PIMHD 108


>sp|HEMA_INBGL|HEMAGGLUTININ B virus (strain B/GL/1954)

Query: 4 PIMHD 8
PIMHD
Sbjct: 107 PIMHD 111


>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)

Query: 4 PIMHD 8
PIMHD
Sbjct: 111 PIMHD 115


>sp|HEMA_INBFU|HEMAGGLUTININ B virus (strain B/Fukuoka/80/1981)

Query: 4 PIMHD 8
PIMHD
Sbjct: 96 PIMHD 100


>sp|HEMA_INBF9|HEMAGGLUTININ B virus (strain B/Finland/151/1990)

Query: 4 PIMHD 8
PIMHD
Sbjct: 96 PIMHD 100


>sp|HEMA_INBF8|HEMAGGLUTININ B virus (strain B/Finland/150/1990)

Query: 4 PIMHD 8
PIMHD
Sbjct: 96 PIMHD 100


>sp|HEMA_INBF7|HEMAGGLUTININ B virus (strain B/Finland/149/1990)

Query: 4 PIMHD 8
PIMHD
Sbjct: 96 PIMHD 100


>sp|HEMA_INBF6|HEMAGGLUTININ B virus (strain B/Finland/148/1990)

Query: 4 PIMHD 8
PIMHD
Sbjct: 96 PIMHD 100


>sp|HEMA_INBF5|HEMAGGLUTININ B virus (strain B/Finland/147/1990)

Query: 4 PIMHD 8
PIMHD
Sbjct: 96 PIMHD 100


>sp|HEMA_INBF4|HEMAGGLUTININ B virus (strain B/Finland/146/1990)

Query: 4 PIMHD 8
PIMHD
Sbjct: 96 PIMHD 100


>sp|HEMA_INBF3|HEMAGGLUTININ B virus (strain B/Finland/145/1990)

Query: 4 PIMHD 8
PIMHD
Sbjct: 96 PIMHD 100


>sp|HEMA_INBF2|HEMAGGLUTININ B virus (strain B/Finland/56/1988)

Query: 4 PIMHD 8
PIMHD
Sbjct: 96 PIMHD 100


>sp|HEMA_INBF1|HEMAGGLUTININ B virus (strain B/Finland/24/1985)

Query: 4 PIMHD 8
PIMHD
Sbjct: 96 PIMHD 100


>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)

Query: 4 PIMHD 8
PIMHD
Sbjct: 111 PIMHD 115


>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)

Query: 4 PIMHD 8
PIMHD
Sbjct: 104 PIMHD 108


>sp|HEMA_INBBK|HEMAGGLUTININ B virus (strain B/Bangkok/163/1990)

Query: 4 PIMHD 8
PIMHD
Sbjct: 111 PIMHD 115


>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)

Query: 4 PIMHD 8
PIMHD
Sbjct: 111 PIMHD 115


>sp|HEMA_INBAA|HEMAGGLUTININ B virus (strain B/Ann

Query: 4 PIMHD 8
PIMHD
Sbjct: 103 PIMHD 107


>sp|HEMA_INBNA|HEMAGGLUTININ B virus (strain B/Nagasaki/1/1987)

Query: 4 PIMHD 8
PIMHD
Sbjct: 96 PIMHD 100


>sp|HEMA_INBYB|HEMAGGLUTININ B virus (strain B/Yamagata/16/1988)

Query: 4 PIMHD 8
PIMHD
Sbjct: 96 PIMHD 100


>sp|VU4_HHV6U|PROTEIN U4|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 HQPIMHD 8
H PI+HD
Sbjct: 293 HLPILHD 299


>sp|HEMA_INBIB|HEMAGGLUTININ B virus (strain B/Ibaraki/2/1985)

Query: 4 PIMHD 8
PIMHD
Sbjct: 96 PIMHD 100


>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 3 QPIMHD 8
+P+MHD
Sbjct: 1130 RPVMHD 1135


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 3 QPIMHD 8
+P+MHD
Sbjct: 1130 RPVMHD 1135


>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 CHQPIMHDL 9
CH P H L
Sbjct: 718 CHWPKSHTL 726


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 CHQPIMHDL 9
CH P H L
Sbjct: 998 CHWPKSHTL 1006


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 CHQPIMHDL 9
CH P H L
Sbjct: 998 CHWPKSHTL 1006


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 CHQPIMHDL 9
CH P H L
Sbjct: 998 CHWPKSHTL 1006


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 CHQPIMHDL 9
CH P H L
Sbjct: 998 CHWPKSHTL 1006


>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 CHQPIMHDL 9
CH P H L
Sbjct: 998 CHWPKSHTL 1006


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 1 CHQPIMHDL 9
CH P H L
Sbjct: 998 CHWPKSHTL 1006


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 CHQPIMHDL 9
CH P H L
Sbjct: 998 CHWPKSHTL 1006


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 CHQPIMHDL 9
CH P H L
Sbjct: 998 CHWPKSHTL 1006


>sp|CEP2_HHV2H|CYTOPLASMIC envelopment protein 2|Human herpesvirus 2 (strain HG52)

Query: 3 QPIMHDLD 10
+P+ H+LD
Sbjct: 167 EPVAHELD 174


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 4 PIMHDL 9
P++HD+
Sbjct: 6252 PVLHDI 6257


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 4 PIMHDL 9
P++HD+
Sbjct: 6229 PVLHDI 6234


>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)

Query: 1 CHQPIM 6
C QPI+
Sbjct: 120 CRQPIL 125


>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)

Query: 1 CHQPIM 6
CH P M
Sbjct: 352 CHSPAM 357


>sp|PG193_VACCC|SOLUBLE interferon gamma receptor OPG193|Vaccinia virus (strain Copenhagen)

Query: 3 QPIMHDLD 10
+P+ +D+D
Sbjct: 158 EPVTYDID 165


>sp|PG193_MONPV|SOLUBLE interferon gamma receptor OPG193|Monkeypox virus (MPXV)

Query: 3 QPIMHDLD 10
+P+ +D+D
Sbjct: 158 EPVTYDID 165


>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)

Query: 1 CHQPIM 6
C QPI+
Sbjct: 120 CRQPIL 125


>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)

Query: 4 PIMHD 8
PI+HD
Sbjct: 295 PILHD 299




58|SequenceR|295|286|DLESSCHQPI

>sp|U8_HHV6U|PROTEIN U8|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 DLESSCHQPI 10
D ES C +PI
Sbjct: 274 DYESKCTRPI 283


>sp|VU8_HHV6Z|PROTEIN U8|Human herpesvirus 6B (strain Z29)

Query: 1 DLESSCHQPI 10
D ES C +PI
Sbjct: 329 DYESKCTRPI 338


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 DLESSCHQPI 10
D ES C +PI
Sbjct: 274 DYESKCTRPI 283


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 5 SCHQP 9
+CHQP
Sbjct: 1395 NCHQP 1399


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 5 SCHQP 9
+CHQP
Sbjct: 1396 NCHQP 1400


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 5 SCHQP 9
+CHQP
Sbjct: 1398 NCHQP 1402


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 5 SCHQP 9
+CHQP
Sbjct: 1398 NCHQP 1402


>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5 SCHQPI 10
SCH PI
Sbjct: 360 SCHSPI 365


>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5 SCHQPI 10
SCH PI
Sbjct: 360 SCHSPI 365


>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5 SCHQPI 10
SCH PI
Sbjct: 360 SCHSPI 365


>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5 SCHQPI 10
SCH PI
Sbjct: 359 SCHSPI 364


>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5 SCHQPI 10
SCH PI
Sbjct: 360 SCHSPI 365


>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)

Query: 5 SCHQPI 10
SCH PI
Sbjct: 351 SCHSPI 356


>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 5 SCHQPI 10
SCH PI
Sbjct: 351 SCHSPI 356


>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5 SCHQPI 10
SCH PI
Sbjct: 359 SCHSPI 364


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 6 CHQP 9
CHQP
Sbjct: 1396 CHQP 1399


>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 5 SCHQPI 10
SCH PI
Sbjct: 351 SCHSPI 356


>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)

Query: 5 SCHQPI 10
SCH PI
Sbjct: 352 SCHSPI 357


>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1

Query: 1 DLESSCHQP 9
++ SS HQP
Sbjct: 1047 EIRSSLHQP 1055


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 4 SSCHQP 9
SSCH P
Sbjct: 2230 SSCHLP 2235


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 4 SSCHQP 9
SSCH P
Sbjct: 2314 SSCHLP 2319


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 4 SSCHQP 9
SSCH P
Sbjct: 2275 SSCHLP 2280


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 4 SSCHQP 9
SSCH P
Sbjct: 2275 SSCHLP 2280


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 4 SSCHQP 9
SSCH P
Sbjct: 2314 SSCHLP 2319


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 4 SSCHQP 9
SSCH P
Sbjct: 2315 SSCHLP 2320


>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)

Query: 1 DLESSCHQP 9
DL S C QP
Sbjct: 762 DLISCCDQP 770


>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)

Query: 5 SCHQPI 10
SCH P+
Sbjct: 360 SCHSPV 365


>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)

Query: 5 SCHQPI 10
SCH P+
Sbjct: 352 SCHSPV 357


>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)

Query: 5 SCHQPI 10
SCH P+
Sbjct: 360 SCHSPV 365


>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)

Query: 5 SCHQPI 10
SCH P+
Sbjct: 352 SCHSPV 357


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 4 SSCHQPI 10
+SCHQ I
Sbjct: 219 ASCHQGI 225


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra

Query: 4 SSCHQPI 10
+SCHQ I
Sbjct: 219 ASCHQGI 225


>sp|NCAP_SFSV|NUCLEOPROTEIN fever sicilian virus (SFS)

Query: 1 DLESSCHQPI 10
D+E S QP+
Sbjct: 192 DIEESFSQPM 201


>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African

Query: 5 SCHQPI 10
SCH P+
Sbjct: 352 SCHSPV 357


>sp|HEX8_ADE03|HEXON-ASSOCIATED protein|Human adenovirus B serotype 3

Query: 2 LESSCHQP 9
LESS QP
Sbjct: 79 LESSSSQP 86


>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)

Query: 1 DLESSCHQPI 10
D + S HQP+
Sbjct: 382 DDQPSSHQPL 391


>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 3 ESSCHQ 8
++SCHQ
Sbjct: 5 QASCHQ 10


>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain

Query: 3 ESSCHQ 8
++SCHQ
Sbjct: 5 QASCHQ 10


>sp|GD_HHV1A|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Angelotti)

Query: 1 DLESSCHQPI 10
D + S HQP+
Sbjct: 383 DDQPSSHQPL 392


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 3 ESSCHQ 8
++SCHQ
Sbjct: 5 QASCHQ 10


>sp|GD_HHV1F|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain F)

Query: 1 DLESSCHQPI 10
D + S HQP+
Sbjct: 383 DDQPSSHQPL 392


>sp|GD_HHV1P|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Patton)

Query: 1 DLESSCHQPI 10
D + S HQP+
Sbjct: 383 DDQPSSHQPL 392


>sp|GD_HHV1K|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain KOS)

Query: 1 DLESSCHQPI 10
D + S HQP+
Sbjct: 383 DDQPSSHQPL 392


>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)

Query: 1 DLESSCHQPI 10
D + S HQP+
Sbjct: 383 DDQPSSHQPL 392


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 4 SSCHQP 9
+SCH P
Sbjct: 2238 TSCHLP 2243




59|SequenceR|300|291|MPAKGDLESS

>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 771 AAGDLESS 778


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 771 AAGDLESS 778


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 765 AAGDLESS 772


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 771 AAGDLESS 778


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 771 AAGDLESS 778


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 771 AAGDLESS 778


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 771 AAGDLESS 778


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 771 AAGDLESS 778


>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 771 AAGDLESS 778


>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A

Query: 1 MPAKGDLES 9
MP K D ES
Sbjct: 2038 MPKKADKES 2046


>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus

Query: 1 MPAKGDLES 9
MP K D ES
Sbjct: 2038 MPKKADKES 2046


>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 275 AAGDLESS 282


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 771 ALGDLESS 778


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 771 ALGDLESS 778


>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3 AKGDLESS 10
A GDLESS
Sbjct: 750 ALGDLESS 757


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 2 PAKGDL 7
PAKGD+
Sbjct: 883 PAKGDI 888


>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)

Query: 1 MPAKGDLE 8
+P K DLE
Sbjct: 677 IPMKADLE 684


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 1 MPAKGDLES 9
+PA DLE+
Sbjct: 1687 LPAPSDLEA 1695




60|SequenceR|305|296|VKEDVMPAKG

>sp|U18_HHV6Z|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (strain Z29)

Query: 1 VKEDVMPAK 9
+K D MP K
Sbjct: 210 IKNDTMPKK 218


>sp|U18_HHV6H|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (HHV-6 variant

Query: 1 VKEDVMPAK 9
+K D MP K
Sbjct: 210 IKNDTMPKK 218


>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 KEDVMPAKG 10
K DV+P KG
Sbjct: 173 KLDVVPIKG 181


>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P

Query: 1 VKEDVMPA 8
+K+D +PA
Sbjct: 325 IKKDALPA 332


>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human

Query: 3 EDVMP 7
EDVMP
Sbjct: 304 EDVMP 308


>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus

Query: 3 EDVMP 7
EDVMP
Sbjct: 304 EDVMP 308


>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human

Query: 3 EDVMP 7
EDVMP
Sbjct: 303 EDVMP 307


>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 EDVMPAK 9
EDV+P K
Sbjct: 169 EDVVPIK 175


>sp|PG065_VACCC|RNA-BINDING protein OPG065|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 EDVMPAK 9
+DV+PAK
Sbjct: 102 DDVIPAK 108


>sp|PG065_VAR67|RNA-BINDING protein OPG065|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3 EDVMPAK 9
+DV+PAK
Sbjct: 102 DDVIPAK 108


>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)

Query: 3 EDVMPAKG 10
++++P+KG
Sbjct: 355 DEIIPSKG 362




61|SequenceR|310|301|LSGVIVKEDV

>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)

Query: 3 GVIVKED 9
GV+VK+D
Sbjct: 1287 GVLVKDD 1293


>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)

Query: 3 GVIVKED 9
GV+VK+D
Sbjct: 1284 GVLVKDD 1290


>sp|GL_VZVO|ENVELOPE glycoprotein L|Varicella-zoster virus (strain Oka vaccine)

Query: 1 LSGVIVK 7
LSG++VK
Sbjct: 71 LSGIVVK 77


>sp|GL_VZVD|ENVELOPE glycoprotein L|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 LSGVIVK 7
LSG++VK
Sbjct: 70 LSGIVVK 76




62|SequenceR|315|306|LDQVSLSGVI

>sp|PHOSP_PI1HC|PHOSPHOPROTEIN parainfluenza 1 virus (strain

Query: 3 QVSLSGVI 10
Q SLSGVI
Sbjct: 22 QESLSGVI 29


>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain

Query: 2 DQVSLSGVI 10
+QV+LSG I
Sbjct: 437 EQVALSGKI 445


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 1 LDQVSLSGV 9
LDQ SGV
Sbjct: 1334 LDQAETSGV 1342


>sp|VE8E2_HPV31|PROTEIN E8^E2C|Human papillomavirus 31

Query: 2 DQVSLSGVI 10
D++S +G++
Sbjct: 15 DEISFAGIV 23


>sp|VE2_HPV31|REGULATORY protein E2|Human papillomavirus 31

Query: 2 DQVSLSGVI 10
D++S +G++
Sbjct: 203 DEISFAGIV 211




63|SequenceR|320|311|SQSAQLDQVS

***** No hits found ******


64|SequenceR|325|316|LWYCASQSAQ

>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)

Query: 2 WYCASQS 8
W+CA+QS
Sbjct: 48 WFCANQS 54


>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 2 WYCASQ 7
WY ASQ
Sbjct: 1319 WYLASQ 1324


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 2 WYCASQ 7
WY ASQ
Sbjct: 1319 WYLASQ 1324


>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 554 LWMCSNGSLQ 563


>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 553 LWMCSNGSLQ 562


>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 554 LWMCSNGSLQ 563


>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 554 LWMCSNGSLQ 563


>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 554 LWMCSNGSLQ 563


>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 554 LWMCSNGSLQ 563


>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 554 LWMCSNGSLQ 563


>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 554 LWMCSNGSLQ 563


>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 543 LWMCSNGSLQ 552


>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 554 LWMCSNGSLQ 563


>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 543 LWMCSNGSLQ 552


>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 554 LWMCSNGSLQ 563


>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 543 LWMCSNGSLQ 552


>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1 LWYCASQSAQ 10
LW C++ S Q
Sbjct: 546 LWMCSNGSLQ 555


>sp|GI_HHV2H|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain HG52)

Query: 1 LWYCAS 6
LW CA+
Sbjct: 14 LWVCAT 19


>sp|GI_HHV23|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain 333)

Query: 1 LWYCAS 6
LW CA+
Sbjct: 14 LWVCAT 19


>sp|GI_HHV11|ENVELOPE glycoprotein I|Human herpesvirus 1 (strain 17)

Query: 1 LWYCAS 6
LW CA+
Sbjct: 14 LWVCAT 19


>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate

Query: 1 LWYCASQ 7
LW C S+
Sbjct: 427 LWDCVSE 433




65|SequenceR|330|321|YRVGKLWYCA

>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 2 RVGKLWYCA 10
RVG++W C+
Sbjct: 1086 RVGRVWPCS 1094


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 2 RVGKLWYCA 10
RVG++W C+
Sbjct: 1086 RVGRVWPCS 1094


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 2 RVGKLWYCA 10
RVG++W C+
Sbjct: 1086 RVGRVWPCS 1094


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 2 RVGKLWYCA 10
RVG++W C+
Sbjct: 1086 RVGRVWPCS 1094


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 2 RVGKLWYCA 10
RVG++W C+
Sbjct: 1086 RVGRVWPCS 1094


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)

Query: 2 RVGKLWYCA 10
RVG++W C+
Sbjct: 1087 RVGRVWPCS 1095


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 2 RVGKLWYCA 10
RVG++W C+
Sbjct: 1086 RVGRVWPCS 1094


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)

Query: 2 RVGKLWYCA 10
R+G++W C+
Sbjct: 1086 RIGRVWSCS 1094


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 2 RVGKLWYCA 10
R+G++W C+
Sbjct: 1087 RIGRVWSCS 1095


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 2 RVGKLWYCA 10
RVG +W C+
Sbjct: 1086 RVGGVWPCS 1094


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 2 RVGKLWYCA 10
RVG +W C+
Sbjct: 1086 RVGGVWPCS 1094


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 2 RVGKLWYCA 10
RVG +W C+
Sbjct: 1086 RVGGVWPCS 1094


>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 4 GKLWYCA 10
G +W CA
Sbjct: 981 GPVWTCA 987


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 4 GKLWYCA 10
G +W CA
Sbjct: 981 GPVWTCA 987


>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)

Query: 5 KLWYCA 10
K W+C
Sbjct: 1541 KFWHCG 1546


>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 5 KLWYCA 10
K W+C
Sbjct: 1541 KFWHCG 1546


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 5 KLWYCA 10
K W+C
Sbjct: 1541 KFWHCG 1546


>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 3 VGKLWYCA 10
+GKLW A
Sbjct: 1842 LGKLWLYA 1849


>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)

Query: 3 VGKLWYCA 10
+GKLW A
Sbjct: 1841 LGKLWLYA 1848


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 3 VGKLWYCA 10
+GKLW A
Sbjct: 1841 LGKLWLYA 1848


>sp|GI_HHV2H|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain HG52)

Query: 6 LWYCA 10
LW CA
Sbjct: 14 LWVCA 18


>sp|GI_HHV23|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain 333)

Query: 6 LWYCA 10
LW CA
Sbjct: 14 LWVCA 18


>sp|GI_HHV11|ENVELOPE glycoprotein I|Human herpesvirus 1 (strain 17)

Query: 6 LWYCA 10
LW CA
Sbjct: 14 LWVCA 18


>sp|MATRX_RABVP|MATRIX protein|Rabies virus (strain Pasteur vaccins

Query: 2 RVGKLW 7
R G+LW
Sbjct: 176 RAGQLW 181


>sp|AGNO_POVBK|AGNOPROTEIN polyomavirus (BKPyV) (Human polyomavirus

Query: 2 RVGKLW 7
+VGK W
Sbjct: 13 KVGKTW 18


>sp|AGNO_POVBA|AGNOPROTEIN polyomavirus (strain AS) (BKPyV)

Query: 2 RVGKLW 7
+VGK W
Sbjct: 21 KVGKTW 26


>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain

Query: 1 YRVGKLWYCA 10
++VG YCA
Sbjct: 896 FKVGVYKYCA 905


>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain

Query: 1 YRVGKLWYCA 10
++VG YCA
Sbjct: 896 FKVGVYKYCA 905


>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 5 KLWYCA 10
+LWY A
Sbjct: 284 RLWYAA 289


>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 5 KLWYCA 10
+LWY A
Sbjct: 284 RLWYAA 289


>sp|CVC1_HHV6Z|CAPSID vertex component 1|Human herpesvirus 6B (strain Z29)

Query: 1 YRVGKLWY 8
YRV WY
Sbjct: 228 YRVVVCWY 235




66|SequenceR|335|326|TGIDSYRVGK

>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2 GIDSYRVG 9
G+D +R+G
Sbjct: 461 GLDDFRIG 468


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2 GIDSYRVG 9
G+D +R+G
Sbjct: 461 GLDDFRIG 468


>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 TGIDSYRV 8
TGI S+R+
Sbjct: 281 TGISSFRI 288


>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)

Query: 1 TGIDSYRV 8
TGI S+R+
Sbjct: 281 TGISSFRI 288


>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)

Query: 1 TGIDSYRV 8
TGI S+R+
Sbjct: 281 TGISSFRI 288


>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus

Query: 1 TGIDSYRV 8
TGI S+R+
Sbjct: 281 TGISSFRI 288


>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 TGIDSYRV 8
TGI S+R+
Sbjct: 281 TGISSFRI 288


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 2 GIDSYRV 8
G+D+YR+
Sbjct: 394 GMDAYRI 400


>sp|PG034_MONPV|PROTEIN OPG034|Monkeypox virus (MPXV)

Query: 3 IDSYRV 8
IDSYR+
Sbjct: 130 IDSYRI 135


>sp|PG034_VAR67|PROTEIN OPG034|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3 IDSYRV 8
IDSYR+
Sbjct: 130 IDSYRI 135


>sp|PG138_VACCA|25 kDa core protein OPG138|Vaccinia virus (strain Ankara) (VACV)

Query: 2 GIDSYRVGK 10
GIDS GK
Sbjct: 142 GIDSVNAGK 150


>sp|PG138_VACCC|25 kDa core protein OPG138|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 GIDSYRVGK 10
GIDS GK
Sbjct: 147 GIDSVNAGK 155


>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981

Query: 2 GIDSYRV 8
GIDS+R+
Sbjct: 300 GIDSFRM 306


>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)

Query: 2 GIDSYR 7
G+D YR
Sbjct: 155 GVDDYR 160


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 2 GIDSYRVG 9
GID R+G
Sbjct: 1306 GIDVVRIG 1313


>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)

Query: 2 GIDSYR 7
G+D YR
Sbjct: 156 GVDDYR 161




67|SequenceR|340|331|IMWALTGIDS

>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 MWALTGIDS 10
MWA TG+ S
Sbjct: 362 MWAGTGVMS 370


>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 MWALTGIDS 10
MWA TG+ S
Sbjct: 362 MWAGTGVMS 370


>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54

Query: 1 IMWALTGID 9
++WA TG++
Sbjct: 95 LVWACTGVE 103


>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35

Query: 1 IMWALTGID 9
++WA TG++
Sbjct: 98 LVWACTGVE 106


>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29

Query: 1 IMWALTGID 9
++WA TG++
Sbjct: 98 LVWACTGVE 106


>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28

Query: 1 IMWALTGID 9
++WA TG++
Sbjct: 98 LVWACTGVE 106


>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10

Query: 1 IMWALTGID 9
++WA TG++
Sbjct: 126 LVWACTGVE 134


>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3

Query: 1 IMWALTGID 9
++WA TG++
Sbjct: 126 LVWACTGVE 134


>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b

Query: 1 IMWALTGID 9
++WA TG++
Sbjct: 95 LVWACTGLE 103


>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a

Query: 1 IMWALTGID 9
++WA TG++
Sbjct: 95 LVWACTGLE 103


>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52

Query: 1 IMWALTGID 9
++WA TG++
Sbjct: 127 LVWACTGLE 135


>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13

Query: 1 IMWALTGID 9
++WA TG++
Sbjct: 95 LVWACTGLE 103


>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11

Query: 1 IMWALTGID 9
++WA TG++
Sbjct: 95 LVWACTGLE 103


>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)

Query: 3 WALTG 7
WALTG
Sbjct: 120 WALTG 124


>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)

Query: 3 WALTG 7
WALTG
Sbjct: 120 WALTG 124


>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)

Query: 3 WALTG 7
WALTG
Sbjct: 120 WALTG 124


>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins

Query: 3 WALTG 7
WALTG
Sbjct: 120 WALTG 124


>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)

Query: 3 WALTG 7
WALTG
Sbjct: 120 WALTG 124


>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)

Query: 3 WALTG 7
WALTG
Sbjct: 120 WALTG 124


>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)

Query: 3 WALTG 7
WALTG
Sbjct: 120 WALTG 124


>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)

Query: 3 WALTG 7
WALTG
Sbjct: 120 WALTG 124


>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)

Query: 3 WALTG 7
WALTG
Sbjct: 120 WALTG 124


>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)

Query: 3 WALTG 7
WALTG
Sbjct: 120 WALTG 124


>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)

Query: 3 WALTG 7
WALTG
Sbjct: 120 WALTG 124


>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)

Query: 3 WALTG 7
WALTG
Sbjct: 120 WALTG 124


>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)

Query: 3 WALTG 7
WALTG
Sbjct: 120 WALTG 124


>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)

Query: 3 WALTG 7
WALTG
Sbjct: 120 WALTG 124


>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50

Query: 1 IMWALTGID 9
++W L GI+
Sbjct: 97 LVWKLVGIE 105


>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63

Query: 1 IMWALTGID 9
++W L GI+
Sbjct: 98 LVWGLRGIE 106


>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human

Query: 1 IMWALTGID 9
++W L GI+
Sbjct: 102 LVWGLRGIE 110


>sp|YVDA_VACCC|UNCHARACTERIZED 9.2 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 IMWALTGID 9
IM+++ G+D
Sbjct: 57 IMYSVIGVD 65


>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67

Query: 1 IMWALTGID 9
++WA GI+
Sbjct: 128 LVWACVGIE 136


>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57

Query: 1 IMWALTGID 9
++WA G++
Sbjct: 114 LLWACVGVE 122


>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a

Query: 1 IMWALTGID 9
++WA G++
Sbjct: 113 LLWACVGVE 121


>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 2 MWALTGIDS 10
+W +TGI +
Sbjct: 352 LWPVTGIQA 360


>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 2 MWALTGIDS 10
+W +TGI +
Sbjct: 352 LWPVTGIQA 360


>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27

Query: 1 IMWALTGID 9
++WA G++
Sbjct: 207 LLWACVGVE 215


>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4

Query: 1 IMWALTGID 9
++W L GI+
Sbjct: 100 LVWKLRGIE 108


>sp|PG108_VAR67|ENVELOPE protein H3|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 IMWALTG 7
++W LTG
Sbjct: 312 LLWFLTG 318


>sp|PG108_VACCC|ENVELOPE protein H3|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 IMWALTG 7
++W LTG
Sbjct: 311 LLWFLTG 317


>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25

Query: 1 IMWALTGID 9
++WA GI+
Sbjct: 99 LVWACRGIE 107


>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21

Query: 1 IMWALTGID 9
++WA GI+
Sbjct: 99 LVWACRGIE 107


>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14

Query: 1 IMWALTGID 9
++WA GI+
Sbjct: 99 LVWACRGIE 107


>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9

Query: 1 IMWALTGID 9
++WA GI+
Sbjct: 99 LVWACRGIE 107


>sp|NCAP_INBP9|NUCLEOPROTEIN B virus (strain B/Panama/45/1990)

Query: 1 IMWALTGID 9
++ ALTGI+
Sbjct: 399 VLSALTGIE 407


>sp|PG108_MONPV|ENVELOPE protein OPG108|Monkeypox virus (MPXV)

Query: 1 IMWALTG 7
++W LTG
Sbjct: 311 LLWFLTG 317


>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65

Query: 1 IMWALTGID 9
++W L GI+
Sbjct: 100 LVWRLRGIE 108


>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)

Query: 1 IMWALTGI 8
+ W LTG+
Sbjct: 378 LFWRLTGL 385


>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)

Query: 1 IMWALTGI 8
+ W LTG+
Sbjct: 378 LFWRLTGL 385


>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)

Query: 1 IMWALTGI 8
+ W LTG+
Sbjct: 378 LFWRLTGL 385


>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180

Query: 1 IMWALTGID 9
++WA G++
Sbjct: 98 LVWACVGVE 106


>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69

Query: 1 IMWALTGID 9
++WA G++
Sbjct: 96 LVWACVGVE 104


>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62

Query: 1 IMWALTGID 9
++WA GI+
Sbjct: 98 MVWACRGIE 106


>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61

Query: 1 IMWALTGID 9
++WA GI+
Sbjct: 100 MVWACRGIE 108


>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40

Query: 1 IMWALTGID 9
++WA G++
Sbjct: 96 LVWACVGVE 104


>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39

Query: 1 IMWALTGID 9
++WA G++
Sbjct: 98 LVWACVGVE 106


>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34

Query: 1 IMWALTGID 9
++WA G++
Sbjct: 123 LVWACAGVE 131


>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26

Query: 1 IMWALTGID 9
++WA G++
Sbjct: 97 LVWACVGVE 105


>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18

Query: 1 IMWALTGID 9
++WA G++
Sbjct: 159 LVWACAGVE 167


>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16

Query: 1 IMWALTGID 9
++WA G++
Sbjct: 98 LVWACVGVE 106


>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7

Query: 1 IMWALTGID 9
++WA G++
Sbjct: 96 LVWACVGVE 104




68|SequenceR|345|336|GDSLTIMWAL

>sp|SPIKE_ADE31|FIBER protein|Human adenovirus A serotype 31

Query: 1 GDSLTIMW 8
G SLT MW
Sbjct: 525 GYSLTFMW 532


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1 GDSLTIMWAL 10
G SLT +W L
Sbjct: 2488 GHSLTWLWLL 2497


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1 GDSLTIMWAL 10
G SLT +W L
Sbjct: 2488 GHSLTWLWLL 2497


>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 DSLTIMW 8
DS+T MW
Sbjct: 110 DSITHMW 116


>sp|SPIKE_ADE12|FIBER protein|Human adenovirus A serotype 12

Query: 1 GDSLTIMWA 9
G SLT MW+
Sbjct: 556 GYSLTFMWS 564


>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972

Query: 1 GDSLTIMWA 9
GD L +W+
Sbjct: 207 GDKLITVWS 215


>sp|SPIK2_ADE41|FIBER protein 2|Human adenovirus F serotype 41

Query: 3 SLTIMWAL 10
SLT +W++
Sbjct: 229 SLTTIWSI 236


>sp|SPIK2_ADE40|FIBER protein 2|Human adenovirus F serotype 40

Query: 3 SLTIMWAL 10
SLT +W++
Sbjct: 229 SLTTIWSI 236


>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980

Query: 2 DSLTIMWA 9
DS+T +W+
Sbjct: 425 DSMTEVWS 432


>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985

Query: 2 DSLTIMWA 9
DS+T +W+
Sbjct: 428 DSITEVWS 435


>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985

Query: 2 DSLTIMWA 9
DS+T +W+
Sbjct: 428 DSITEVWS 435


>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge

Query: 2 DSLTIMWA 9
DS+T +W+
Sbjct: 428 DSITEVWS 435


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 1 GDSLTIMW 8
GD+L MW
Sbjct: 2516 GDTLGDMW 2523




69|SequenceR|350|341|IFNHLGDSLT

>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)

Query: 1 IFNHLGDSL 9
I NH+GD L
Sbjct: 656 ISNHMGDEL 664


>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 IFNHLGDSL 9
I NH+GD L
Sbjct: 656 ISNHMGDEL 664


>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20

Query: 1 IFNHLGDS 8
+FN LGD+
Sbjct: 123 LFNKLGDT 130


>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)

Query: 1 IFNHLGDSL 9
+FN GDSL
Sbjct: 654 LFNQHGDSL 662


>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 1 IFNHLGDSL 9
+FN GDSL
Sbjct: 654 LFNQHGDSL 662


>sp|HBSAG_HBVD6|LARGE envelope protein|Hepatitis B virus genotype D

Query: 1 IFNHLGDSLT 10
IF+ +GD +T
Sbjct: 153 IFSRIGDPVT 162


>sp|VPR_HV2D1|PROTEIN Vpr|Human immunodeficiency virus type 2

Query: 1 IFNHLGDSL 9
I+N GD+L
Sbjct: 51 IYNRHGDTL 59


>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50

Query: 1 IFNHLGDS 8
+FN +GD+
Sbjct: 121 LFNKVGDT 128


>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25

Query: 1 IFNHLGDS 8
+FN +GD+
Sbjct: 123 LFNKVGDT 130


Query: 2 FNHLGDSL 9
+N+LG+S+
Sbjct: 296 YNNLGNSM 303


>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21

Query: 1 IFNHLGDS 8
+FN +GD+
Sbjct: 123 LFNKVGDT 130


>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19

Query: 1 IFNHLGDS 8
+FN +GD+
Sbjct: 152 LFNKVGDT 159


>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14

Query: 1 IFNHLGDS 8
+FN +GD+
Sbjct: 123 LFNKVGDT 130


>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)

Query: 4 HLGDSL 9
H+GD+L
Sbjct: 283 HIGDTL 288


>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)

Query: 4 HLGDSL 9
H+GD+L
Sbjct: 283 HIGDTL 288


>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)

Query: 4 HLGDSL 9
H+GD+L
Sbjct: 283 HIGDTL 288


>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)

Query: 4 HLGDSL 9
H+GD+L
Sbjct: 283 HIGDTL 288


>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)

Query: 4 HLGDSL 9
H+GD+L
Sbjct: 283 HIGDTL 288


>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human

Query: 4 HLGDSL 9
H+GD+L
Sbjct: 283 HIGDTL 288


>sp|PG160_VACCC|DNA packaging protein OPG160|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 IFNHLGDSLT 10
IF+ +GD L+
Sbjct: 108 IFDDVGDKLS 117


>sp|PG160_VARV|DNA packaging protein OPG160|Variola virus

Query: 1 IFNHLGDSLT 10
IF+ +GD L+
Sbjct: 108 IFDDVGDKLS 117


>sp|PG160_VAR67|DNA packaging protein OPG160|Variola virus (isolate

Query: 1 IFNHLGDSLT 10
IF+ +GD L+
Sbjct: 108 IFDDVGDKLS 117


>sp|GM_HCMVM|ENVELOPE glycoprotein M|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 NHLGDSLT 10
+++GDSLT
Sbjct: 120 SYMGDSLT 127


>sp|GM_HCMVA|ENVELOPE glycoprotein M|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 NHLGDSLT 10
+++GDSLT
Sbjct: 120 SYMGDSLT 127


>sp|PG160_MONPV|DNA packaging protein OPG160|Monkeypox virus (MPXV)

Query: 1 IFNHLGDSLT 10
IF+ +GD L+
Sbjct: 138 IFDDVGDKLS 147


>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8

Query: 1 IFNHLGDSL 9
++N+ GD+L
Sbjct: 53 VYNNNGDTL 61


>sp|VE2_HPV56|REGULATORY protein E2|Human papillomavirus 56

Query: 3 NHLGDSLT 10
NH GD T
Sbjct: 228 NHPGDKTT 235




70|SequenceR|355|346|IALGDIFNHL

>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)

Query: 1 IALGDIFN 8
I +GDIFN
Sbjct: 523 IKIGDIFN 530


>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 IALGDIFN 8
I +GDIFN
Sbjct: 523 IKIGDIFN 530


>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 1 IALGDIFN 8
I +GDIFN
Sbjct: 523 IKIGDIFN 530


>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12

Query: 1 IALGDIFNH 9
+ L DIFNH
Sbjct: 372 LLLKDIFNH 380


>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 IALGDIFNHL 10
+A DIF HL
Sbjct: 727 VAYTDIFTHL 736


>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 IALGDIFNHL 10
+A DIF HL
Sbjct: 727 VAYTDIFTHL 736


>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 IALGDIFNHL 10
+A DIF HL
Sbjct: 727 VAYTDIFTHL 736


>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)

Query: 1 IALGDIFN 8
I +GD+FN
Sbjct: 523 IKIGDVFN 530


>sp|MCEL_VAR67|MRNA-CAPPING enzyme catalytic subunit|Variola virus (isolate

Query: 1 IALGDIFN 8
I +GD+FN
Sbjct: 523 IKIGDVFN 530


>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus

Query: 1 IALGDIFN 8
I +GD+FN
Sbjct: 523 IKIGDVFN 530


>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)

Query: 1 IALGDIFN 8
I +GD+FN
Sbjct: 523 IKIGDVFN 530


>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /

Query: 1 IALGDIFN 8
I +GD+FN
Sbjct: 523 IKIGDVFN 530


>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988

Query: 2 ALGDIFNHL 10
A+G FNHL
Sbjct: 409 AVGKEFNHL 417


>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New

Query: 2 ALGDIFNHL 10
A+G FNHL
Sbjct: 409 AVGKEFNHL 417


>sp|UL127_HCMVA|UNCHARACTERIZED protein UL127|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 LGDIFN 8
+GDIFN
Sbjct: 73 IGDIFN 78


>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8

Query: 2 ALGDIFNHL 10
A GD FN L
Sbjct: 172 AFGDGFNEL 180


>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)

Query: 2 ALGDIFNH 9
+GD F H
Sbjct: 1440 GIGDFFKH 1447


>sp|K42_HHV8P|PROTEIN K4.2|Human herpesvirus 8 type P

Query: 3 LGDIFNHL 10
L D+F+HL
Sbjct: 29 LYDLFSHL 36


>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)

Query: 4 GDIFNHL 10
G+I++HL
Sbjct: 651 GEIYSHL 657


>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United

Query: 1 IALGDIFNH 9
I ++FNH
Sbjct: 367 IQFDEVFNH 375


>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)

Query: 4 GDIFNHL 10
G+I++HL
Sbjct: 651 GEIYSHL 657


>sp|VME1_CVH22|MEMBRANE protein|Human coronavirus 229E (HCoV-229E)

Query: 4 GDIFNHL 10
GDI HL
Sbjct: 8 GDIVTHL 14


>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)

Query: 3 LGDIFNHL 10
LG+ ++HL
Sbjct: 648 LGETYHHL 655


>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV

Query: 5 DIFNHL 10
D++NH+
Sbjct: 576 DLYNHM 581


>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)

Query: 4 GDIFNHL 10
GD NHL
Sbjct: 385 GDAVNHL 391




71|SequenceR|360|351|TFSAGIALGD

>sp|VU26_HHV7J|PROTEIN U26|Human herpesvirus 7 (strain JI)

Query: 1 TFSAGIALGD 10
+FS G+ LG+
Sbjct: 7 SFSMGLVLGN 16


>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 AGIALGD 10
AGI LGD
Sbjct: 547 AGIQLGD 553


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 AGIALGD 10
AGI LGD
Sbjct: 545 AGIELGD 551


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 AGIALGD 10
AGI LGD
Sbjct: 546 AGIELGD 552


>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)

Query: 4 AGIALG 9
AG+ALG
Sbjct: 380 AGVALG 385


>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 TFSAGIAL 8
TF+AG+ L
Sbjct: 933 TFAAGLLL 940


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 TFSAGIAL 8
TF+AG+ L
Sbjct: 1213 TFAAGLLL 1220


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 TFSAGIAL 8
TF+AG+ L
Sbjct: 1213 TFAAGLLL 1220


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 TFSAGIAL 8
TF+AG+ L
Sbjct: 1213 TFAAGLLL 1220


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 TFSAGIAL 8
TF+AG+ L
Sbjct: 1213 TFAAGLLL 1220


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 1 TFSAGIAL 8
TF+AG+ L
Sbjct: 1213 TFAAGLLL 1220


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 TFSAGIAL 8
TF+AG+ L
Sbjct: 1213 TFAAGLLL 1220


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 TFSAGIAL 8
TF+AG+ L
Sbjct: 1213 TFAAGLLL 1220




72|SequenceR|365|356|QFVSVTFSAG

>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 5 VTFSAG 10
VTFSAG
Sbjct: 210 VTFSAG 215


>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 5 VTFSAG 10
VTFSAG
Sbjct: 210 VTFSAG 215


>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 5 VTFSAG 10
VTFSAG
Sbjct: 209 VTFSAG 214


>sp|MATRX_PI2HT|MATRIX protein|Human parainfluenza 2 virus (strain

Query: 2 FVSVTFS 8
FVS+T+S
Sbjct: 172 FVSITYS 178




73|SequenceR|370|361|STSIGQFVSV

>sp|PHOSP_VSIVC|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 2 TSIGQFVSV 10
+S G+F+SV
Sbjct: 226 SSRGEFISV 234


>sp|PHOSP_VSIVM|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 2 TSIGQFVSV 10
+S G+F+SV
Sbjct: 226 SSRGEFISV 234


>sp|PHOSP_VSIVN|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 2 TSIGQFVSV 10
+S G+F+SV
Sbjct: 226 SSRGEFISV 234


>sp|PHOSP_VSIVS|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 2 TSIGQFVSV 10
+S G+F+SV
Sbjct: 226 SSRGEFISV 234


>sp|PHOSP_VSIVA|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 2 TSIGQFVSV 10
+S G+F+SV
Sbjct: 226 SSRGEFISV 234


>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 1 STSIGQFVS 9
STS G FV+
Sbjct: 1322 STSCGPFVA 1330


>sp|PHOSP_VSIVG|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 2 TSIGQFVSV 10
+S G+F+SV
Sbjct: 226 SSRGEFISV 234




74|SequenceR|375|366|CLIAVSTSIG

>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)

Query: 1 CLIAVSTSIG 10
CLI +TSI
Sbjct: 109 CLITATTSIA 118


>sp|VP35_MABVR|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ravn-87)

Query: 1 CLIAVSTS 8
CLI+ STS
Sbjct: 50 CLISKSTS 57


>sp|US09_HCMVM|MEMBRANE glycoprotein US9|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 CLIAVS 6
CLIAVS
Sbjct: 16 CLIAVS 21


>sp|US09_HCMVA|UNIQUE short US9 glycoprotein|Human cytomegalovirus (strain AD169)

Query: 1 CLIAVS 6
CLIAVS
Sbjct: 16 CLIAVS 21


>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)

Query: 1 CLIAVSTSIG 10
C++ +TSI
Sbjct: 109 CIVTATTSIA 118


>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 CLIAVSTSIG 10
C++ +TSI
Sbjct: 109 CIVTATTSIA 118




75|SequenceR|380|371|HPFEECLIAV

>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare

Query: 1 HPFEEC 6
HPF EC
Sbjct: 259 HPFTEC 264


>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse

Query: 1 HPFEEC 6
HPF EC
Sbjct: 259 HPFTEC 264


Query: 1 HPFEECLI 8
H FE C++
Sbjct: 590 HDFEACIL 597


>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United

Query: 1 HPFEEC 6
HPF EC
Sbjct: 259 HPFTEC 264


Query: 1 HPFEECLI 8
H FE C++
Sbjct: 590 HDFEACIL 597


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 2 PFEECLIA 9
PFE C++
Sbjct: 2013 PFEHCILG 2020


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 2 PFEECLIA 9
PFE C++
Sbjct: 2012 PFEHCILG 2019


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 2 PFEECLIA 9
PFE C++
Sbjct: 2012 PFEHCILG 2019


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)

Query: 2 PFEECLIA 9
PFE C++
Sbjct: 2012 PFEHCILG 2019


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 2 PFEECLIA 9
PFE C++
Sbjct: 2010 PFEHCILG 2017


>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 PFEECLIAV 10
PF C IAV
Sbjct: 644 PFPACTIAV 652


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 HPFEECLI 8
HP +CL+
Sbjct: 750 HPSSDCLV 757


>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)

Query: 1 HPFEECLIA 9
H FE C +A
Sbjct: 468 HYFERCTLA 476


>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)

Query: 1 HPFEECLIA 9
H FE C +A
Sbjct: 484 HYFERCTLA 492


>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 2 PFEECLIAV 10
PF C +AV
Sbjct: 644 PFPACTVAV 652


>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 PFEECLIAV 10
PF C +AV
Sbjct: 644 PFPACTVAV 652


>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41

Query: 3 FEECLIAV 10
FE C++A+
Sbjct: 288 FERCILAM 295


>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 PFEEC 6
PF+EC
Sbjct: 181 PFDEC 185


>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40

Query: 3 FEECLIAV 10
FE C++A+
Sbjct: 292 FERCIMAM 299


>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus

Query: 2 PFEEC 6
PF+EC
Sbjct: 181 PFDEC 185


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 2 PFEECL 7
P+E+C+
Sbjct: 1147 PYEQCV 1152


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 2 PFEECL 7
P+E+C+
Sbjct: 1147 PYEQCV 1152


>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)

Query: 1 HPFEECLIA 9
+PF C IA
Sbjct: 36 YPFRICSIA 44


>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 HPFEECLIA 9
+PF C IA
Sbjct: 36 YPFRICSIA 44


>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)

Query: 1 HPFEECLIA 9
+PF C IA
Sbjct: 36 YPFRICSIA 44


>sp|E1B55_ADE12|E1B 55 kDa protein|Human adenovirus A serotype 12

Query: 3 FEECLIAV 10
FE+C++A+
Sbjct: 292 FEKCVLAL 299




76|SequenceR|385|376|FDGLEHPFEE

>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1 FDGLEHPFEE 10
+ GLEHP +E
Sbjct: 337 YGGLEHPIDE 346


>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1 FDGLEHPFEE 10
+ GLEHP E
Sbjct: 337 YGGLEHPINE 346


>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1 FDGLEHPFEE 10
+ GLEHP E
Sbjct: 337 YGGLEHPINE 346


>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1 FDGLEHPFEE 10
+ GLEHP E
Sbjct: 337 YGGLEHPINE 346


>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1 FDGLEHPFEE 10
+ GLEHP E
Sbjct: 337 YGGLEHPINE 346


>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1 FDGLEHPFEE 10
+ GLEHP E
Sbjct: 337 YGGLEHPINE 346


>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1 FDGLEHPFEE 10
+ GLEHP E
Sbjct: 337 YGGLEHPINE 346


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 2 DGLEHPFEE 10
D +E PFEE
Sbjct: 1023 DIIEQPFEE 1031


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 2 DGLEHPFEE 10
D +E PFEE
Sbjct: 1023 DIIEQPFEE 1031


>sp|AN_VZVD|ALKALINE nuclease|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3 GLEHPF 8
GL+HPF
Sbjct: 24 GLQHPF 29


>sp|AN_VZVO|ALKALINE nuclease|Varicella-zoster virus (strain Oka vaccine)

Query: 3 GLEHPF 8
GL+HPF
Sbjct: 24 GLQHPF 29


>sp|PG165_VACCC|PROTEIN OPG165|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4 LEHPFE 9
LEHPF+
Sbjct: 223 LEHPFD 228


>sp|PG165_MONPV|PROTEIN OPG165|Monkeypox virus (MPXV)

Query: 4 LEHPFE 9
LEHPF+
Sbjct: 228 LEHPFD 233


>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)

Query: 3 GLEHPF 8
GLEHPF
Sbjct: 286 GLEHPF 291


>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 3 GLEHPF 8
GLEHPF
Sbjct: 286 GLEHPF 291


>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 3 GLEHPF 8
GLEHPF
Sbjct: 286 GLEHPF 291


>sp|UL148_HCMVM|MEMBRANE protein UL148|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 FDGLEHPFEE 10
F G+ PF E
Sbjct: 43 FSGVRRPFTE 52


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 2 DGLEHPFE 9
+GLEH F+
Sbjct: 632 NGLEHRFD 639


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 3 GLEHPFE 9
G+EH FE
Sbjct: 637 GIEHRFE 643


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 3 GLEHPFE 9
G EHP E
Sbjct: 1890 GTEHPVE 1896


>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69

Query: 4 LEHPFEE 10
LEH FE+
Sbjct: 332 LEHSFED 338


>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)

Query: 6 HPFEE 10
HP+EE
Sbjct: 638 HPYEE 642


>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)

Query: 6 HPFEE 10
HP+EE
Sbjct: 638 HPYEE 642


>sp|E311_ADE05|EARLY E3A 10.5 kDa glycoprotein|Human adenovirus C serotype 5

Query: 1 FDGLEHPF 8
DGL+H F
Sbjct: 81 LDGLKHMF 88


>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 5 EHPFEE 10
E PFEE
Sbjct: 794 EEPFEE 799


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 5 EHPFEE 10
+HPF E
Sbjct: 408 DHPFHE 413


>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 DGLEHPF 8
DGL+H F
Sbjct: 316 DGLKHVF 322


>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)

Query: 6 HPFEE 10
HP+EE
Sbjct: 304 HPYEE 308


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 2 DGLEHPF 8
DG HP+
Sbjct: 2949 DGTPHPY 2955


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 2 DGLEHPF 8
DG HP+
Sbjct: 2969 DGTPHPY 2975


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 2 DGLEHPF 8
DG HP+
Sbjct: 2999 DGTPHPY 3005


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 2 DGLEHPF 8
DG HP+
Sbjct: 2949 DGTPHPY 2955


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 2 DGLEHPF 8
DG HP+
Sbjct: 2969 DGTPHPY 2975


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 2 DGLEHPF 8
DG HP+
Sbjct: 2999 DGTPHPY 3005


>sp|CVC1_HHV8P|CAPSID vertex component 1|Human herpesvirus 8 type P

Query: 2 DGLEHPFE 9
DG HPF+
Sbjct: 89 DGNFHPFD 96


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 3 GLEHPF 8
GLEH F
Sbjct: 640 GLEHRF 645


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 3 GLEHP 7
GL+HP
Sbjct: 2090 GLDHP 2094


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 3 GLEHP 7
GL+HP
Sbjct: 2090 GLDHP 2094


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 3 GLEHP 7
GL+HP
Sbjct: 2090 GLDHP 2094


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 3 GLEHP 7
GL+HP
Sbjct: 2090 GLDHP 2094


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 3 GLEHP 7
GL+HP
Sbjct: 2090 GLDHP 2094


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 3 GLEHP 7
GL+HP
Sbjct: 2090 GLDHP 2094


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 3 GLEHP 7
GL+HP
Sbjct: 2090 GLDHP 2094


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 3 GLEHP 7
GL+HP
Sbjct: 2090 GLDHP 2094


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 3 GLEHP 7
GL+HP
Sbjct: 2090 GLDHP 2094


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 3 GLEHPFE 9
G+EH F+
Sbjct: 640 GIEHRFD 646




77|SequenceR|390|381|NLLIVFDGLE

>sp|KTHY_VACCT|THYMIDYLATE kinase|Vaccinia virus (strain Tian Tan)

Query: 3 LIVFDGLE 10
LIVF+GL+
Sbjct: 6 LIVFEGLD 13


>sp|KTHY_VACCC|THYMIDYLATE kinase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 LIVFDGLE 10
LIVF+GL+
Sbjct: 6 LIVFEGLD 13


>sp|KTHY_VACCA|THYMIDYLATE kinase|Vaccinia virus (strain Ankara) (VACV)

Query: 3 LIVFDGLE 10
LIVF+GL+
Sbjct: 6 LIVFEGLD 13


>sp|KTHY_CWPXB|THYMIDYLATE kinase|Cowpox virus (strain Brighton Red)

Query: 3 LIVFDGLE 10
LIVF+GL+
Sbjct: 6 LIVFEGLD 13


>sp|KTHY_VARV|THYMIDYLATE kinase|Variola virus

Query: 3 LIVFDGLE 10
LIVF+GL+
Sbjct: 6 LIVFEGLD 13


>sp|KTHY_VAR67|THYMIDYLATE kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3 LIVFDGLE 10
LIVF+GL+
Sbjct: 6 LIVFEGLD 13


>sp|KTHY_MONPV|THYMIDYLATE kinase|Monkeypox virus (MPXV)

Query: 3 LIVFDGLE 10
LIVF+GL+
Sbjct: 6 LIVFEGLD 13


>sp|KTHY_CWPXG|THYMIDYLATE kinase|Cowpox virus (strain GRI-90 /

Query: 3 LIVFDGLE 10
LIVF+GL+
Sbjct: 6 LIVFEGLD 13


>sp|UL79_HHV8P|PROTEIN UL79 homolog|Human herpesvirus 8 type P

Query: 4 IVFDGLE 10
+V+DGLE
Sbjct: 83 LVYDGLE 89


>sp|PG189_VACCC|ANKYRIN repeat protein OPG189|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 LIVFDGLE 10
LI+FD +E
Sbjct: 313 LIIFDAVE 320


>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 2 LLIVFDGL 9
+L+V DG+
Sbjct: 469 ILVVLDGM 476


>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)

Query: 2 LLIVFDGL 9
+L+V DG+
Sbjct: 469 ILVVLDGM 476


>sp|PG189_VARV|ANKYRIN repeat protein OPG189|Variola virus

Query: 3 LIVFDGLE 10
LI+FD +E
Sbjct: 313 LIIFDAVE 320


>sp|PG189_VAR67|ANKYRIN repeat protein OPG189|Variola virus (isolate Human/India/Ind3/1967)

Query: 3 LIVFDGLE 10
LI+FD +E
Sbjct: 313 LIIFDAVE 320


>sp|PG189_MONPV|ANKYRIN repeat protein OPG189|Monkeypox virus (MPXV)

Query: 3 LIVFDGLE 10
LI+FD +E
Sbjct: 316 LIIFDAVE 323




78|SequenceR|395|386|ISMGANLLIV

>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 3 MGANLLI 9
MGANL +
Sbjct: 1902 MGANLCV 1908


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 3 MGANLLI 9
MGANL +
Sbjct: 1902 MGANLCV 1908


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 3 MGANLLI 9
MGANL +
Sbjct: 1902 MGANLCV 1908


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 3 MGANLLI 9
MGANL +
Sbjct: 1902 MGANLCV 1908


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 3 MGANLLI 9
MGANL +
Sbjct: 1902 MGANLCV 1908


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 3 MGANLLI 9
MGANL +
Sbjct: 1902 MGANLCV 1908


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 3 MGANLLI 9
MGANL +
Sbjct: 1902 MGANLCV 1908


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 3 MGANLLI 9
MGANL +
Sbjct: 1902 MGANLCV 1908


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 3 MGANLLI 9
MGANL +
Sbjct: 1902 MGANLCV 1908




79|SequenceR|400|391|FLAQQISMGA

>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 1 FLAQQISMG 9
F+A ++S+G
Sbjct: 1803 FIATKVSLG 1811




80|SequenceR|405|396|SLFNFFLAQQ

***** No hits found ******


81|SequenceR|410|401|YCCCASLFNF

>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC +SLFN
Sbjct: 380 YCNTSSLFN 388


>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFNF 10
YC A +FN+
Sbjct: 382 YCNTAKMFNY 391


>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC A LFN
Sbjct: 384 YCNTAQLFN 392


>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 2 CCCAS 6
CCCA+
Sbjct: 670 CCCAA 674


>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 2 CCCAS 6
CCCA+
Sbjct: 670 CCCAA 674


>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)

Query: 2 CCCASL 7
CCC SL
Sbjct: 796 CCCKSL 801


>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC ++LFN
Sbjct: 377 YCNTSTLFN 385


>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)

Query: 2 CCCA 5
CCCA
Sbjct: 469 CCCA 472


>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)

Query: 2 CCCA 5
CCCA
Sbjct: 469 CCCA 472


>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFNF 10
YC + +FN+
Sbjct: 389 YCNTSGMFNY 398


>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC ++LFN
Sbjct: 379 YCNTSNLFN 387


>sp|PG141_MONPV|VIRION membrane protein OPG141|Monkeypox virus (MPXV)

Query: 3 CCASLFNF 10
CC LFNF
Sbjct: 15 CCVLLFNF 22


>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)

Query: 2 CCCA 5
CCCA
Sbjct: 471 CCCA 474


>sp|PG141_VAR67|VIRION membrane protein OPG141|Variola virus (isolate

Query: 3 CCASLFNF 10
CC LFNF
Sbjct: 15 CCVLLFNF 22


>sp|PG141_VACCC|VIRION membrane protein OPG141|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 CCASLFNF 10
CC LFNF
Sbjct: 15 CCVLLFNF 22


>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 CCCASL 7
CCC S+
Sbjct: 130 CCCGSV 135


>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3

Query: 1 YCCCAS 6
Y CCA+
Sbjct: 59 YACCAT 64


>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 CCCASL 7
CCC S+
Sbjct: 130 CCCGSV 135


>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human

Query: 1 YCCCAS 6
Y CCA+
Sbjct: 59 YTCCAT 64


>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1

Query: 1 YCCCAS 6
Y CCA+
Sbjct: 59 YSCCAT 64


>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC + LFN
Sbjct: 387 YCNTSQLFN 395


>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC + LFN
Sbjct: 373 YCNTSKLFN 381


>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC + LFN
Sbjct: 375 YCNTSKLFN 383


>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC + LFN
Sbjct: 386 YCNTSKLFN 394


>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC + LFN
Sbjct: 385 YCNTSGLFN 393


>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC + LFN
Sbjct: 384 YCNTSGLFN 392


>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC + LFN
Sbjct: 382 YCNTSGLFN 390


>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC + LFN
Sbjct: 375 YCNTSGLFN 383


>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC + LFN
Sbjct: 382 YCNTSGLFN 390


>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC + LFN
Sbjct: 394 YCNTSRLFN 402


>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC + LFN
Sbjct: 369 YCNTSRLFN 377


>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)

Query: 4 CASLFN 9
C SLFN
Sbjct: 783 CVSLFN 788


>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC + LFN
Sbjct: 387 YCNTSPLFN 395


>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61

Query: 4 CASLFNF 10
C SL NF
Sbjct: 486 CMSLLNF 492


>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC + LFN
Sbjct: 380 YCNTSRLFN 388


>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 4 CASLFN 9
C SLFN
Sbjct: 786 CVSLFN 791


>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate

Query: 4 CASLFN 9
C SLFN
Sbjct: 782 CVSLFN 787


>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC + LFN
Sbjct: 389 YCDSSQLFN 397


>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC + LFN
Sbjct: 374 YCDTSGLFN 382


>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC LFN
Sbjct: 395 YCNTTQLFN 403


>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC LFN
Sbjct: 386 YCNTTQLFN 394


>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC LFN
Sbjct: 378 YCNSTQLFN 386


>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC LFN
Sbjct: 380 YCNSTQLFN 388


>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC LFN
Sbjct: 382 YCNSTQLFN 390


>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC LFN
Sbjct: 384 YCNSTQLFN 392


>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC LFN
Sbjct: 380 YCNSTQLFN 388


>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC LFN
Sbjct: 394 YCNSTQLFN 402


>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC LFN
Sbjct: 384 YCNSTQLFN 392


>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC LFN
Sbjct: 384 YCNSTQLFN 392


>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC LFN
Sbjct: 393 YCNSTQLFN 401


>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC LFN
Sbjct: 389 YCNSTQLFN 397


>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC LFN
Sbjct: 384 YCNSTQLFN 392


>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC LFN
Sbjct: 384 YCNSTQLFN 392


>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC LFN
Sbjct: 386 YCNTTKLFN 394


>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC LFN
Sbjct: 385 YCNTTKLFN 393


>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC LFN
Sbjct: 383 YCNTTKLFN 391


>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate

Query: 4 CASLFN 9
C SLFN
Sbjct: 782 CVSLFN 787


>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)

Query: 5 ASLFNF 10
ASLFNF
Sbjct: 490 ASLFNF 495


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 5 ASLFNF 10
ASLFNF
Sbjct: 813 ASLFNF 818


>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YCCCASLFN 9
YC LFN
Sbjct: 382 YCDSTQLFN 390


>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 4 CASLFN 9
C SLFN
Sbjct: 782 CISLFN 787


>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 YCCCASLFN 9
Y CA FN
Sbjct: 1259 YSPCAQYFN 1267


>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 YCCCASLFN 9
Y CA FN
Sbjct: 1259 YSPCAQYFN 1267


>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)

Query: 1 YCCCASLF 8
YC C S F
Sbjct: 270 YCVCGSKF 277


>sp|VE2_HPV50|REGULATORY protein E2|Human papillomavirus type 50

Query: 1 YCCCASLFNF 10
Y CC+S + +
Sbjct: 340 YECCSSAWKW 349


>sp|ORF4_HEVPA|PROTEIN ORF4|Hepatitis E virus genotype 1

Query: 2 CCCAS 6
CCC++
Sbjct: 102 CCCST 106




82|SequenceR|415|406|FALGLYCCCA

>sp|DNBI_ADE12|PROBABLE DNA-binding protein|Human adenovirus A serotype 12

Query: 1 FALGLYCCCA 10
F L L+CC A
Sbjct: 120 FVLFLFCCIA 129


>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 5 LYCCC 9
L+CCC
Sbjct: 344 LFCCC 348


>sp|US01_HCMVM|PROTEIN US1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5 LYCCC 9
L+CCC
Sbjct: 32 LWCCC 36


>sp|US01_HCMVA|UNCHARACTERIZED protein HQLF3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5 LYCCC 9
L+CCC
Sbjct: 32 LWCCC 36


>sp|TRX2_HHV8P|TRIPLEX capsid protein 2|Human herpesvirus 8 type P

Query: 2 ALGLYCCCA 10
ALGL C C+
Sbjct: 44 ALGLGCVCS 52


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 6 YCCC 9
YCCC
Sbjct: 3765 YCCC 3768


Query: 4 GLYCC 8
G+YCC
Sbjct: 227 GVYCC 231


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 6 YCCC 9
YCCC
Sbjct: 3765 YCCC 3768


Query: 4 GLYCC 8
G+YCC
Sbjct: 227 GVYCC 231


>sp|PRO_ADE17|PROTEASE adenovirus D serotype 17

Query: 2 ALGLYCC 8
A GL+CC
Sbjct: 122 ACGLFCC 128


>sp|PRO_ADE41|PROTEASE adenovirus F serotype 41

Query: 2 ALGLYCC 8
A GL+CC
Sbjct: 121 ACGLFCC 127


>sp|PRO_ADE09|PROTEASE adenovirus D serotype 9

Query: 2 ALGLYCC 8
A GL+CC
Sbjct: 122 ACGLFCC 128


>sp|PRO_ADE12|PROTEASE adenovirus A serotype 12

Query: 2 ALGLYCC 8
A GL+CC
Sbjct: 121 ACGLFCC 127


>sp|PRO_ADE03|PROTEASE adenovirus B serotype 3

Query: 2 ALGLYCC 8
A GL+CC
Sbjct: 126 ACGLFCC 132


>sp|PRO_ADE02|PROTEASE adenovirus C serotype 2

Query: 2 ALGLYCC 8
A GL+CC
Sbjct: 121 ACGLFCC 127


>sp|PRO_ADE05|PROTEASE adenovirus C serotype 5

Query: 2 ALGLYCC 8
A GL+CC
Sbjct: 121 ACGLFCC 127


>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)

Query: 1 FALGLYCC 8
F LG+ CC
Sbjct: 734 FLLGILCC 741


>sp|PRO_ADE40|PROTEASE adenovirus F serotype 40

Query: 2 ALGLYCC 8
A GL+CC
Sbjct: 121 ACGLFCC 127


>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 1 FALGLYCC 8
F LG+ CC
Sbjct: 734 FLLGVLCC 741


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 4 GLYCC 8
G+YCC
Sbjct: 227 GVYCC 231


>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 1 FALGLYCC 8
F LG+ CC
Sbjct: 734 FLLGVLCC 741


>sp|G7_VARV|ASSEMBLY protein G7|Variola virus

Query: 4 GLYCCC 9
G+Y CC
Sbjct: 54 GIYNCC 59


>sp|G7_VAR67|ASSEMBLY protein G7|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 4 GLYCCC 9
G+Y CC
Sbjct: 54 GIYNCC 59


>sp|G7_VACCC|ASSEMBLY protein G7|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4 GLYCCC 9
G+Y CC
Sbjct: 54 GIYNCC 59


>sp|G7_VACCA|ASSEMBLY protein G7|Vaccinia virus (strain Ankara) (VACV)

Query: 4 GLYCCC 9
G+Y CC
Sbjct: 54 GIYNCC 59


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 4 GLYCC 8
G+YCC
Sbjct: 227 GVYCC 231


>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38

Query: 3 LGLYCCC 9
+ LY CC
Sbjct: 228 MSLYLCC 234


>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23

Query: 3 LGLYCCC 9
+ LY CC
Sbjct: 231 MSLYLCC 237


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 5 LYCCC 9
L CCC
Sbjct: 416 LTCCC 420


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 5 LYCCC 9
L CCC
Sbjct: 414 LTCCC 418


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 5 LYCCC 9
L CCC
Sbjct: 413 LTCCC 417


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 5 LYCCC 9
L CCC
Sbjct: 415 LTCCC 419


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 5 LYCCC 9
L CCC
Sbjct: 415 LTCCC 419


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 5 LYCCC 9
L CCC
Sbjct: 415 LTCCC 419


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 5 LYCCC 9
L CCC
Sbjct: 415 LTCCC 419


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 5 LYCCC 9
L CCC
Sbjct: 414 LTCCC 418


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 5 LYCCC 9
L CCC
Sbjct: 415 LTCCC 419


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 5 LYCCC 9
L CCC
Sbjct: 415 LTCCC 419


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 FALGLYC 7
F+LGL C
Sbjct: 1135 FSLGLLC 1141


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 FALGLYC 7
F+LGL C
Sbjct: 1134 FSLGLLC 1140


>sp|US06_HCMVT|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1 FALGLYCCCA 10
FA+ LY CC
Sbjct: 146 FAVTLYLCCG 155


>sp|US06_HCMVA|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 FALGLYCCCA 10
FA+ LY CC
Sbjct: 146 FAVTLYLCCG 155


>sp|US06_HCMVM|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain Merlin)

Query: 1 FALGLYCCCA 10
FA+ LY CC
Sbjct: 145 FAVTLYLCCG 154


>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22

Query: 3 LGLYCCC 9
+ LY CC
Sbjct: 232 MSLYLCC 238


>sp|FUS_MEASZ|FUSION glycoprotein F0|Measles virus (strain Edmonston-Zagreb vaccine)

Query: 4 GLYCCC 9
L CCC
Sbjct: 512 ALICCC 517


>sp|FUS_MEASP|FUSION glycoprotein F0|Measles virus (strain Philadelphia-26) (MeV)

Query: 4 GLYCCC 9
L CCC
Sbjct: 512 ALICCC 517


>sp|FUS_MEASL|FUSION glycoprotein F0|Measles virus (strain Leningrad-16) (MeV)

Query: 4 GLYCCC 9
L CCC
Sbjct: 512 ALICCC 517


>sp|FUS_MEASH|FUSION glycoprotein F0|Measles virus (strain Halle) (MeV)

Query: 4 GLYCCC 9
L CCC
Sbjct: 512 ALICCC 517


>sp|FUS_MEASF|FUSION glycoprotein F0|Measles virus (strain Edmonston B)

Query: 4 GLYCCC 9
L CCC
Sbjct: 512 ALICCC 517


>sp|FUS_MEASE|FUSION glycoprotein F0|Measles virus (strain Edmonston) (MeV)

Query: 4 GLYCCC 9
L CCC
Sbjct: 512 ALICCC 517


>sp|FUS_MEASC|FUSION glycoprotein F0|Measles virus (strain Ichinose-B95a) (MeV)

Query: 4 GLYCCC 9
L CCC
Sbjct: 512 ALICCC 517


>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)

Query: 1 FALGLYCC 8
LGL CC
Sbjct: 743 LTLGLLCC 750


Query: 5 LYCCC 9
L CCC
Sbjct: 795 LICCC 799


>sp|FUS_MEASI|FUSION glycoprotein F0|Measles virus (strain IP-3-Ca) (MeV)

Query: 4 GLYCCC 9
L CCC
Sbjct: 515 ALICCC 520


>sp|FUS_MEASY|FUSION glycoprotein F0|Measles virus (strain Yamagata-1) (MeV)

Query: 4 GLYCCC 9
L CCC
Sbjct: 512 ALICCC 517


>sp|FUS_MEASA|FUSION glycoprotein F0|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 4 GLYCCC 9
L CCC
Sbjct: 512 ALICCC 517


>sp|DR6_HHV6Z|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6B (strain Z29)

Query: 5 LYCCCA 10
LY CC
Sbjct: 107 LYVCCG 112


>sp|U22_HHV6Z|PROTEIN U22|Human herpesvirus 6B (strain Z29)

Query: 1 FALGLYCCC 9
FA+ ++C C
Sbjct: 182 FAVAVFCSC 190


>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)

Query: 5 LYCCCA 10
L CCC+
Sbjct: 1134 LLCCCS 1139


>sp|US16_HCMVM|PROTEIN US16|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 ALGLYCCC 9
ALG+ C C
Sbjct: 141 ALGVTCAC 148


>sp|US16_HCMVA|UNCHARACTERIZED protein HVLF2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 ALGLYCCC 9
ALG+ C C
Sbjct: 141 ALGVTCAC 148


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 4 GLYCCC 9
G+Y CC
Sbjct: 2670 GIYQCC 2675


>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1 FALGLYC 7
F+LGL C
Sbjct: 1471 FSLGLEC 1477


>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1 FALGLYC 7
F+LGL C
Sbjct: 1471 FSLGLEC 1477


>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 1 FALGLYC 7
F+LGL C
Sbjct: 1486 FSLGLEC 1492


>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1 FALGLYC 7
F+LGL C
Sbjct: 1471 FSLGLEC 1477


>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 1 FALGLYC 7
F+LGL C
Sbjct: 1486 FSLGLEC 1492


>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2

Query: 1 FALGLYC 7
F+LGL C
Sbjct: 1469 FSLGLEC 1475


>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)

Query: 3 LGLYC 7
LG+YC
Sbjct: 54 LGIYC 58


>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)

Query: 3 LGLYC 7
LG+YC
Sbjct: 54 LGIYC 58


>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 LGLYC 7
LG+YC
Sbjct: 54 LGIYC 58


>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 2 ALGLYCCCA 10
ALG CC A
Sbjct: 666 ALGGCCCAA 674


>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1 FALGLYC 7
F+LGL C
Sbjct: 1471 FSLGLEC 1477


>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1 FALGLYC 7
F+LGL C
Sbjct: 1471 FSLGLEC 1477


>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 2 ALGLYCCCA 10
ALG CC A
Sbjct: 666 ALGGCCCAA 674


>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)

Query: 5 LYCCC 9
L CCC
Sbjct: 795 LICCC 799


>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)

Query: 1 FALGLYCC 8
+ LG+ CC
Sbjct: 742 WTLGILCC 749


>sp|BILF2_EBVB9|GLYCOPROTEIN BILF2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 5 LYCCC 9
L CCC
Sbjct: 7 LLCCC 11


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 3 LGLYCCCA 10
LG+ CC+
Sbjct: 1305 LGVASCCS 1312


>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4

Query: 1 FALGLYC 7
F+LGL C
Sbjct: 1485 FSLGLEC 1491


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 4 GLYCCCA 10
GL CC A
Sbjct: 394 GLRCCIA 400


>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)

Query: 3 LGLYC 7
LG+YC
Sbjct: 490 LGMYC 494


>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)

Query: 3 LGLYC 7
LG+YC
Sbjct: 490 LGMYC 494


>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)

Query: 3 LGLYC 7
LG+YC
Sbjct: 490 LGMYC 494


>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)

Query: 1 FALGLYCC 8
+ LG+ CC
Sbjct: 742 WTLGILCC 749


>sp|VE5_HPV70|PROBABLE protein E5|Human papillomavirus type 70

Query: 1 FALGLYCCCA 10
FA+ LY CC+
Sbjct: 17 FAVCLYICCS 26


>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 GLYCCC 9
G Y CC
Sbjct: 68 GAYVCC 73


>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)

Query: 3 LGLYCC 8
LG+ CC
Sbjct: 743 LGVLCC 748


>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)

Query: 3 LGLYCC 8
LG+ CC
Sbjct: 743 LGVLCC 748


>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)

Query: 4 GLYCCCA 10
GL CC A
Sbjct: 71 GLRCCIA 77


>sp|ORF4_HEVPA|PROTEIN ORF4|Hepatitis E virus genotype 1

Query: 5 LYCCCA 10
L CCC+
Sbjct: 100 LICCCS 105


>sp|US32_HCMVM|PROTEIN US32|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 GLYCCCA 10
GL+C C
Sbjct: 21 GLWCDCG 27




83|SequenceR|420|411|GALIGFALGL

>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)

Query: 1 GALIGFALGL 10
GA++GF LG+
Sbjct: 4 GAVVGFLLGV 13


>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)

Query: 1 GALIGFALGL 10
GA++GF LG+
Sbjct: 4 GAVVGFLLGV 13


>sp|GAG_SFV3L|GAG polyprotein|Simian foamy virus type 3

Query: 2 ALIGFALGL 10
ALIG +LGL
Sbjct: 335 ALIGGSLGL 343


Query: 1 GALIGFALGL 10
G GF LG+
Sbjct: 385 GVATGFQLGI 394


>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)

Query: 1 GALIGFALGL 10
+L+G +LG+
Sbjct: 703 ASLVGLSLGM 712


>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 2 ALIGFALGL 10
+L+G +LG+
Sbjct: 704 SLVGLSLGM 712


>sp|VP2_POVBK|MINOR capsid protein VP2|BK polyomavirus (BKPyV) (Human polyomavirus

Query: 1 GALIGFA 7
GA+ GFA
Sbjct: 76 GAIAGFA 82


>sp|VP2_POVBA|MINOR capsid protein VP2|BK polyomavirus (strain AS) (BKPyV)

Query: 1 GALIGFA 7
GA+ GFA
Sbjct: 76 GAIAGFA 82




84|SequenceR|425|416|ASFHSGALIG

>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)

Query: 3 FHSGALIG 10
FH+GAL+G
Sbjct: 397 FHTGALVG 404


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 3 FHSGALI 9
FHSGALI
Sbjct: 184 FHSGALI 190


>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)

Query: 3 FHSGALIG 10
FHSG+L+G
Sbjct: 395 FHSGSLVG 402


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 1 ASFHSGALI 9
+ FH+GALI
Sbjct: 433 SQFHAGALI 441


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 1 ASFHSGALI 9
+ FH GAL+
Sbjct: 184 SKFHQGALL 192


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 1 ASFHSGALI 9
+ FH GAL+
Sbjct: 184 SKFHQGALL 192


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 1 ASFHSGALI 9
+ FH GAL+
Sbjct: 184 SKFHQGALL 192


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 1 ASFHSGALI 9
+ FH GAL+
Sbjct: 184 SKFHQGALL 192


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 1 ASFHSGALI 9
+ FH GAL+
Sbjct: 184 SKFHQGALL 192


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2 SFHSGALIG 10
SF +GA++G
Sbjct: 772 SFTNGAIVG 780


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 SFHSGALIG 10
SF +GA++G
Sbjct: 772 SFTNGAIVG 780


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 1 ASFHSGALI 9
+ FH+G+L+
Sbjct: 262 SQFHAGSLL 270


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 1 ASFHSGALI 9
+ FH+G+L+
Sbjct: 256 SQFHAGSLL 264


>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)

Query: 1 ASFHSGALI 9
+ FH+G+L+
Sbjct: 256 SQFHAGSLL 264


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 1 ASFHSGALI 9
+ FH+G+L+
Sbjct: 256 SQFHAGSLL 264


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b

Query: 1 ASFHSGALI 9
+ FH+G+L+
Sbjct: 256 SQFHAGSLL 264


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 1 ASFHSGAL 8
+ FH GAL
Sbjct: 184 SKFHQGAL 191


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 1 ASFHSGAL 8
+ FH GAL
Sbjct: 184 SKFHQGAL 191


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 1 ASFHSGAL 8
+ FH GAL
Sbjct: 184 SKFHQGAL 191


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 1 ASFHSGAL 8
+ FH GAL
Sbjct: 184 SKFHQGAL 191


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 1 ASFHSGAL 8
+ FH GAL
Sbjct: 184 SKFHQGAL 191


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 1 ASFHSGAL 8
+ FH GAL
Sbjct: 184 SKFHQGAL 191


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 1 ASFHSGAL 8
+ FH GAL
Sbjct: 184 SKFHQGAL 191


>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)

Query: 1 ASFHSGALI 9
+ FH G+LI
Sbjct: 368 SQFHGGSLI 376


>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)

Query: 1 ASFHSGALI 9
+ FH G+LI
Sbjct: 371 SQFHGGSLI 379


>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 SFHSGALIG 10
SF+ GA+ G
Sbjct: 430 SFNGGAMSG 438




85|SequenceR|430|421|AFIWNASFHS

>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)

Query: 2 FIWNASFH 9
FIWN FH
Sbjct: 337 FIWNRVFH 344


>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)

Query: 2 FIWNASFH 9
F+WN FH
Sbjct: 346 FLWNRVFH 353


>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)

Query: 2 FIWNASFH 9
F+WN FH
Sbjct: 346 FLWNRVFH 353


>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain

Query: 2 FIWNASFH 9
F+WN FH
Sbjct: 346 FLWNRVFH 353


>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)

Query: 4 WNASFHS 10
W+A+FH+
Sbjct: 1417 WSAAFHA 1423


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 4 WNASFHS 10
W ASFHS
Sbjct: 862 WIASFHS 868


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 4 WNASFHS 10
W ASFHS
Sbjct: 862 WIASFHS 868


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 4 WNASFHS 10
W ASFHS
Sbjct: 862 WIASFHS 868


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 4 WNASFHS 10
W ASFHS
Sbjct: 862 WIASFHS 868


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 4 WNASFHS 10
W A+FHS
Sbjct: 862 WIAAFHS 868


>sp|VL2_HPV10|MINOR capsid protein L2|Human papillomavirus type 10

Query: 2 FIWNASFH 9
++W +FH
Sbjct: 442 YLWPVTFH 449


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 3 IWNAS 7
IWNAS
Sbjct: 2487 IWNAS 2491


>sp|VU25_HHV7J|PROTEIN U25|Human herpesvirus 7 (strain JI)

Query: 4 WNASFHS 10
W +FHS
Sbjct: 36 WRVTFHS 42


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1 AFIWNAS 7
A IWNA+
Sbjct: 2684 ACIWNAA 2690


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1 AFIWNAS 7
A IWNA+
Sbjct: 2684 ACIWNAA 2690


>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)

Query: 3 IWNASFHS 10
+W FH+
Sbjct: 395 VWKIEFHN 402


>sp|C_PI3H4|PROTEIN C|Human parainfluenza 3 virus (strain

Query: 4 WNASFH 9
WN S H
Sbjct: 189 WNLSVH 194




86|SequenceR|435|426|MGGALAFIWN

>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 MGGALAFIWN 10
+ G+LA IW+
Sbjct: 749 VNGSLALIWD 758


>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 MGGALAFIWN 10
+ G+LA IW+
Sbjct: 744 VNGSLALIWD 753


>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 MGGALAFIWN 10
+ G+LA IW+
Sbjct: 749 VNGSLALIWD 758


>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 MGGALAFIWN 10
+ G+LA IW+
Sbjct: 747 VNGSLALIWD 756


>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 MGGALAFIWN 10
+ G+LA IW+
Sbjct: 749 VNGSLALIWD 758


>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 MGGALAFIWN 10
+ G+LA IW+
Sbjct: 749 VNGSLALIWD 758


>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 MGGALAFIWN 10
+ G+LA IW+
Sbjct: 754 VNGSLALIWD 763


>sp|PRO_ADE04|PROTEASE adenovirus E serotype 4

Query: 5 LAFIWN 10
LAF WN
Sbjct: 58 LAFAWN 63


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 4 ALAFIW 9
ALAF W
Sbjct: 668 ALAFAW 673


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 4 ALAFIW 9
ALAF W
Sbjct: 668 ALAFAW 673


>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1

Query: 3 GALAFIWN 10
G+L WN
Sbjct: 564 GSLTLFWN 571


>sp|PRO_ADE05|PROTEASE adenovirus C serotype 5

Query: 5 LAFIWN 10
+AF WN
Sbjct: 56 MAFAWN 61


>sp|PRO_ADE02|PROTEASE adenovirus C serotype 2

Query: 5 LAFIWN 10
+AF WN
Sbjct: 56 MAFAWN 61


>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)

Query: 2 GGALAFIW 9
GG F+W
Sbjct: 879 GGVYPFMW 886


>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 2 GGALAFIW 9
GG F+W
Sbjct: 888 GGVYPFMW 895


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 2 GGALAFIW 9
GG F+W
Sbjct: 888 GGVYPFMW 895


>sp|PRO_ADE12|PROTEASE adenovirus A serotype 12

Query: 5 LAFIWN 10
LAF WN
Sbjct: 56 LAFGWN 61


>sp|PRO_ADE03|PROTEASE adenovirus B serotype 3

Query: 5 LAFIWN 10
LAF WN
Sbjct: 62 LAFGWN 67


>sp|PRO_ADE09|PROTEASE adenovirus D serotype 9

Query: 5 LAFIWN 10
LAF WN
Sbjct: 57 LAFGWN 62


>sp|UL56_HHV2H|PROTEIN UL56|Human herpesvirus 2 (strain HG52)

Query: 5 LAFIW 9
LAF+W
Sbjct: 230 LAFLW 234


>sp|PRO_ADE17|PROTEASE adenovirus D serotype 17

Query: 5 LAFIWN 10
LAF WN
Sbjct: 57 LAFGWN 62




87|SequenceR|440|431|SIYLFMGGAL

>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 SIYLFMG 7
SIY FMG
Sbjct: 575 SIYKFMG 581


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 SIYLFMG 7
SIY FMG
Sbjct: 575 SIYKFMG 581


>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 SIYLFMG 7
SIY FMG
Sbjct: 79 SIYKFMG 85


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 SIYLFMG 7
SIY FMG
Sbjct: 576 SIYKFMG 582


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 SIYLFMG 7
SIY FMG
Sbjct: 575 SIYKFMG 581


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 SIYLFMG 7
SIY FMG
Sbjct: 575 SIYKFMG 581


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 SIYLFMG 7
SIY FMG
Sbjct: 569 SIYKFMG 575


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 SIYLFMG 7
SIY FMG
Sbjct: 575 SIYKFMG 581


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 SIYLFMG 7
SIY FMG
Sbjct: 575 SIYKFMG 581


>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 SIYLFMG 7
SIY FMG
Sbjct: 554 SIYKFMG 560


>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 SIYLFMG 7
SIY FMG
Sbjct: 575 SIYKFMG 581


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 SIYLFMG 7
SIY FMG
Sbjct: 575 SIYKFMG 581


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 SIYLFMG 7
SIY FMG
Sbjct: 575 SIYKFMG 581


>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)

Query: 1 SIYLFMGG 8
S+Y+F GG
Sbjct: 93 SVYVFHGG 100


>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)

Query: 1 SIYLFMGG 8
S+Y+F GG
Sbjct: 93 SVYVFHGG 100


>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)

Query: 1 SIYLFMGG 8
S+Y+F GG
Sbjct: 93 SVYVFHGG 100


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 1 SIYLFMGG 8
S+Y+F GG
Sbjct: 93 SVYVFHGG 100


>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 YLFMGG 8
YLF+GG
Sbjct: 497 YLFIGG 502


>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 1 SIYLFMGG 8
S+Y+F GG
Sbjct: 93 SVYVFHGG 100


>sp|PG189_MONPV|ANKYRIN repeat protein OPG189|Monkeypox virus (MPXV)

Query: 1 SIYLFM 6
SIYLF+
Sbjct: 12 SIYLFL 17


>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57

Query: 1 SIYLFMGGAL 10
S+ F+GGA+
Sbjct: 483 SLLQFLGGAV 492


>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a

Query: 1 SIYLFMGGAL 10
S+ F+GGA+
Sbjct: 483 SLLQFLGGAV 492


>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27

Query: 1 SIYLFMGGAL 10
S+ F+GGA+
Sbjct: 483 SLLQFLGGAV 492


>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10

Query: 1 SIYLFMGGAL 10
S+ F+GGA+
Sbjct: 521 SLLRFLGGAV 530


>sp|ORF10_HHV8P|PROTEIN ORF10|Human herpesvirus 8 type P

Query: 1 SIYLFMGGAL 10
+ Y+F GG L
Sbjct: 134 TTYVFKGGDL 143


>sp|NP04_VZVO|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 1 SIYLFMGGA 9
++Y F GG+
Sbjct: 80 TLYAFTGGS 88


>sp|NP04_VZVD|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 SIYLFMGGA 9
++Y F GG+
Sbjct: 80 TLYAFTGGS 88


>sp|ORF2P_POL1M|ORF2P protein|Poliovirus type 1 (strain Mahoney)

Query: 2 IYLFMGGA 9
IYLF G A
Sbjct: 24 IYLFAGSA 31


>sp|ORF2P_HE71B|ORF2P protein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 2 IYLFMG 7
+YLF+G
Sbjct: 24 VYLFVG 29


>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61

Query: 1 SIYLFMGGAL 10
S+ F+GGA+
Sbjct: 488 SLLNFLGGAV 497


>sp|UL33_HHV6U|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 6A (strain

Query: 2 IYLFMGGAL 10
+Y F GG L
Sbjct: 293 VYAFTGGEL 301




88|SequenceR|445|436|FMDALSIYLF

>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47

Query: 2 MDALSIYLF 10
+DA+S+YL
Sbjct: 226 IDAMSLYLL 234


>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36

Query: 2 MDALSIYLF 10
+DA+S+YL
Sbjct: 225 IDAMSLYLL 233


>sp|U18_HHV6U|PUTATIVE immediate early glycoprotein|Human herpesvirus 6A (strain

Query: 2 MDALSIYLF 10
M++LS+Y+F
Sbjct: 6 MESLSVYIF 14


>sp|PG089_VACCC|PUTATIVE nuclease OPG089|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 FMDALSIYL 9
F+D +SIY+
Sbjct: 31 FVDTMSIYI 39


>sp|PG089_MONPV|PUTATIVE nuclease OPG089|Monkeypox virus (MPXV)

Query: 1 FMDALSIYL 9
F+D +SIY+
Sbjct: 31 FVDTMSIYI 39


>sp|PG089_VARV|PUTATIVE nuclease OPG089|Variola virus

Query: 1 FMDALSIYL 9
F+D +SIY+
Sbjct: 31 FVDTMSIYI 39


>sp|PG089_VAR67|PUTATIVE nuclease OPG089|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 FMDALSIYL 9
F+D +SIY+
Sbjct: 31 FVDTMSIYI 39


>sp|YVDC_VACCC|UNCHARACTERIZED 7.3 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 5 LSIYLF 10
LSIYLF
Sbjct: 24 LSIYLF 29




89|SequenceR|450|441|ENMEPFMDAL

>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 2 NMEPFM 7
NM+PF+
Sbjct: 2075 NMQPFI 2080


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 2 NMEPFM 7
NM+PF+
Sbjct: 2075 NMQPFI 2080


>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 2 NMEPFMDAL 10
N+EP M+ L
Sbjct: 1219 NLEPVMNIL 1227


>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain

Query: 3 MEPFMDAL 10
M PF+D L
Sbjct: 524 MAPFVDGL 531


>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate

Query: 3 MEPFMDA 9
++PF+DA
Sbjct: 310 LKPFIDA 316


>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain

Query: 3 MEPFMDA 9
++PF+DA
Sbjct: 310 LKPFIDA 316


>sp|FUS_MEASZ|FUSION glycoprotein F0|Measles virus (strain Edmonston-Zagreb vaccine)

Query: 3 MEPFMDAL 10
+EP DAL
Sbjct: 84 LEPIRDAL 91


>sp|FUS_MEASY|FUSION glycoprotein F0|Measles virus (strain Yamagata-1) (MeV)

Query: 3 MEPFMDAL 10
+EP DAL
Sbjct: 84 LEPIRDAL 91


>sp|FUS_MEASP|FUSION glycoprotein F0|Measles virus (strain Philadelphia-26) (MeV)

Query: 3 MEPFMDAL 10
+EP DAL
Sbjct: 84 LEPIRDAL 91


>sp|FUS_MEASL|FUSION glycoprotein F0|Measles virus (strain Leningrad-16) (MeV)

Query: 3 MEPFMDAL 10
+EP DAL
Sbjct: 84 LEPIRDAL 91


>sp|FUS_MEASI|FUSION glycoprotein F0|Measles virus (strain IP-3-Ca) (MeV)

Query: 3 MEPFMDAL 10
+EP DAL
Sbjct: 87 LEPIRDAL 94


>sp|FUS_MEASH|FUSION glycoprotein F0|Measles virus (strain Halle) (MeV)

Query: 3 MEPFMDAL 10
+EP DAL
Sbjct: 84 LEPIRDAL 91


>sp|FUS_MEASF|FUSION glycoprotein F0|Measles virus (strain Edmonston B)

Query: 3 MEPFMDAL 10
+EP DAL
Sbjct: 84 LEPIRDAL 91


>sp|FUS_MEASE|FUSION glycoprotein F0|Measles virus (strain Edmonston) (MeV)

Query: 3 MEPFMDAL 10
+EP DAL
Sbjct: 84 LEPIRDAL 91


>sp|FUS_MEASC|FUSION glycoprotein F0|Measles virus (strain Ichinose-B95a) (MeV)

Query: 3 MEPFMDAL 10
+EP DAL
Sbjct: 84 LEPIRDAL 91


>sp|FUS_MEASA|FUSION glycoprotein F0|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 3 MEPFMDAL 10
+EP DAL
Sbjct: 84 LEPIRDAL 91


>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus

Query: 3 MEPFMDA 9
++PF+DA
Sbjct: 310 LKPFVDA 316


>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)

Query: 3 MEPFMDA 9
++PF+DA
Sbjct: 310 LKPFVDA 316


>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United

Query: 1 ENMEPFMDA 9
+NM PF+ A
Sbjct: 800 QNMSPFVIA 808




90|SequenceR|455|446|DEQCVENMEP

>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 2 EQCVEN 7
EQC+EN
Sbjct: 1428 EQCIEN 1433


>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)

Query: 2 EQCVEN 7
EQCV+N
Sbjct: 434 EQCVDN 439


>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 2 EQCVEN 7
EQCV+N
Sbjct: 434 EQCVDN 439


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 2 EQCVEN 7
EQCV+N
Sbjct: 434 EQCVDN 439


>sp|PG001_MONPV|CHEMOKINE-BINDING protein|Monkeypox virus (MPXV)

Query: 1 DEQCVENME 9
D +CV+N+E
Sbjct: 190 DTKCVKNLE 198


>sp|PG001_VAR67|CHEMOKINE-BINDING protein|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 DEQCVENME 9
D +CV+N+E
Sbjct: 197 DTKCVKNLE 205


>sp|PG001_VACCL|CHEMOKINE-BINDING protein|Vaccinia virus (strain Lister) (VACV)

Query: 1 DEQCVENME 9
D +CV+N+E
Sbjct: 202 DTKCVKNLE 210


>sp|PG001_VACCC|INACTIVE chemokine-binding protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 DEQCVENME 9
D +CV+N+E
Sbjct: 188 DTKCVKNLE 196


>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980

Query: 1 DEQCVENM 8
D+QC+E++
Sbjct: 484 DDQCMESI 491


>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4

Query: 2 EQCVENMEP 10
E CV +M P
Sbjct: 718 EPCVPSMPP 726


>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)

Query: 3 QCVENM 8
QC ENM
Sbjct: 284 QCQENM 289


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 1 DEQCVENM 8
DEQC E +
Sbjct: 3904 DEQCQEQI 3911


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 1 DEQCVEN 7
DE+CV N
Sbjct: 1348 DEECVVN 1354


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 1 DEQCVEN 7
DE+CV N
Sbjct: 1348 DEECVVN 1354


>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P

Query: 1 DEQCVE 6
+EQCVE
Sbjct: 198 EEQCVE 203


>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P

Query: 1 DEQCVENMEP 10
DEQ E EP
Sbjct: 39 DEQLSEPAEP 48


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 3 QCVENM 8
QC++N+
Sbjct: 130 QCIQNL 135


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 3 QCVENM 8
QC++N+
Sbjct: 130 QCIQNL 135




91|SequenceR|460|451|SGKREDEQCV

>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3365 GKREDQWC 3372


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3363 GKREDQWC 3370


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3330 GKREDQWC 3337


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3330 GKREDQWC 3337


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3330 GKREDQWC 3337


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3332 GKREDQWC 3339


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3330 GKREDQWC 3337


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3330 GKREDQWC 3337


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3368 GKREDQWC 3375


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3331 GKREDQWC 3338


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3331 GKREDQWC 3338


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3331 GKREDQWC 3338


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3331 GKREDQWC 3338


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3331 GKREDQWC 3338


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3331 GKREDQWC 3338


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3328 GKREDQWC 3335


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 GKREDEQC 9
GKRED+ C
Sbjct: 3331 GKREDQWC 3338


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 1 SGKREDEQC 9
SGKRED C
Sbjct: 3369 SGKREDIWC 3377


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 1 SGKREDEQC 9
SGKRED C
Sbjct: 3372 SGKREDIWC 3380


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 1 SGKREDEQC 9
SGKRED C
Sbjct: 3372 SGKREDIWC 3380


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2 GKREDEQC 9
GKRED C
Sbjct: 3332 GKREDRWC 3339


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 1 SGKREDEQC 9
+GKRED C
Sbjct: 3373 TGKREDIWC 3381


>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 1 SGKREDEQCV 10
SGK+ D CV
Sbjct: 1706 SGKQYDAYCV 1715


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 1 SGKREDEQCV 10
SGK+ D CV
Sbjct: 1706 SGKQYDAYCV 1715


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 1 SGKREDEQCV 10
SGK+ D CV
Sbjct: 1706 SGKQYDAYCV 1715


>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P

Query: 3 KREDEQCV 10
K E+EQCV
Sbjct: 195 KPEEEQCV 202


>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 1 SGKREDEQCV 10
SGK+ D CV
Sbjct: 1706 SGKQYDAYCV 1715


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 1 SGKREDEQCV 10
SGK+ D CV
Sbjct: 1707 SGKQYDAYCV 1716


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 1 SGKREDEQCV 10
SGK+ D CV
Sbjct: 1707 SGKQYDAYCV 1716


>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 1 SGKREDEQCV 10
SGK+ D CV
Sbjct: 1707 SGKQYDAYCV 1716


>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 1 SGKREDEQCV 10
SGK+ D CV
Sbjct: 1706 SGKQYDAYCV 1715


>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 1 SGKREDEQCV 10
SGK+ D CV
Sbjct: 1706 SGKQYDAYCV 1715


>sp|PKG3_ADE12|PACKAGING protein 3|Human adenovirus A serotype 12

Query: 1 SGKREDEQC 9
SG++E+ QC
Sbjct: 26 SGEQEEPQC 34


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 2 GKREDEQCV 10
GKRE+E V
Sbjct: 1666 GKREEETPV 1674


>sp|VITF3_VARV|INTERMEDIATE transcription factor 3 large|Variola virus

Query: 1 SGKREDE 7
SGK+ DE
Sbjct: 151 SGKKSDE 157


>sp|VITF3_VAR67|INTERMEDIATE transcription factor 3 large|Variola virus (isolate

Query: 1 SGKREDE 7
SGK+ DE
Sbjct: 151 SGKKSDE 157


>sp|VITF3_MONPV|INTERMEDIATE transcription factor 3 large|Monkeypox virus (MPXV)

Query: 1 SGKREDE 7
SGK+ DE
Sbjct: 151 SGKKSDE 157


>sp|VTF3L_VACCT|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Tian Tan)

Query: 1 SGKREDE 7
SGK+ DE
Sbjct: 151 SGKKSDE 157


>sp|VTF3L_VACCA|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Ankara) (VACV)

Query: 1 SGKREDE 7
SGK+ DE
Sbjct: 151 SGKKSDE 157


>sp|VTF3L_MONPZ|INTERMEDIATE transcription factor 3 large|Monkeypox virus (strain Zaire-96-I-16)

Query: 1 SGKREDE 7
SGK+ DE
Sbjct: 151 SGKKSDE 157


>sp|VITF3_VACCC|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Copenhagen)

Query: 1 SGKREDE 7
SGK+ DE
Sbjct: 151 SGKKSDE 157


>sp|UL59_HCMVA|UNCHARACTERIZED protein UL59|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5 EDEQCV 10
+DE+CV
Sbjct: 116 QDEKCV 121


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 4 REDEQCV 10
+ DE+CV
Sbjct: 1346 KNDEECV 1352


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 4 REDEQCV 10
+ DE+CV
Sbjct: 1346 KNDEECV 1352


>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3

Query: 2 GKREDEQCV 10
G R D CV
Sbjct: 294 GHRSDPDCV 302


>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 4 REDEQC 9
RE+E+C
Sbjct: 744 REEEKC 749


>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)

Query: 2 GKREDE 7
GK+EDE
Sbjct: 505 GKQEDE 510


>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)

Query: 2 GKREDE 7
GK+EDE
Sbjct: 505 GKQEDE 510


>sp|REP_HCYV5|REPLICATION-ASSOCIATED protein|Human associated cyclovirus 1 (isolate

Query: 2 GKREDEQCV 10
GKR D Q V
Sbjct: 105 GKRNDLQSV 113




92|SequenceR|465|456|FPILISGKRE

>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 1 FPILISGK 8
FPI++ GK
Sbjct: 128 FPIMLEGK 135


>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 1 FPILISGK 8
FPI++ GK
Sbjct: 128 FPIMLEGK 135


>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 1 FPILISGK 8
FPI++ GK
Sbjct: 127 FPIMLEGK 134


>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 1 FPILISGK 8
FPI++ GK
Sbjct: 128 FPIMLEGK 135


>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 1 FPILISGK 8
FPI++ GK
Sbjct: 128 FPIMLEGK 135


>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)

Query: 1 FPILISGK 8
FP+++ GK
Sbjct: 107 FPVMLDGK 114


>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)

Query: 4 LISGKRE 10
LI+GKRE
Sbjct: 200 LINGKRE 206


>sp|NCAP_INCAA|NUCLEOPROTEIN C virus (strain C/Ann

Query: 4 LISGKRE 10
LI+GKRE
Sbjct: 200 LINGKRE 206


>sp|NCAP_INCCA|NUCLEOPROTEIN C virus (strain C/California/1978)

Query: 4 LISGKRE 10
LI+GKRE
Sbjct: 200 LINGKRE 206


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 2 PILISGKRE 10
P+L+ G R+
Sbjct: 871 PLLVRGSRD 879


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 3 ILISGKRE 10
IL+SG+ E
Sbjct: 1100 ILVSGRSE 1107


>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)

Query: 1 FPILISGKR 9
+P+L+S ++
Sbjct: 2084 YPVLVSSRQ 2092


>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 1 FPILISGKR 9
+P+L+S ++
Sbjct: 2084 YPVLVSSRQ 2092


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 1 FPILISGKR 9
+P+L+S ++
Sbjct: 2084 YPVLVSSRQ 2092


>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)

Query: 2 PILISG 7
PIL+SG
Sbjct: 265 PILVSG 270


>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 PILISG 7
PIL+SG
Sbjct: 265 PILVSG 270


>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)

Query: 2 PILISG 7
PIL+SG
Sbjct: 265 PILVSG 270


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 3 ILISGKRE 10
+++SGK+E
Sbjct: 738 LVLSGKKE 745




93|SequenceR|470|461|LNQIIFPILI

>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain

Query: 2 NQIIFPIL 9
NQ+I P+L
Sbjct: 57 NQVIIPVL 64


>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)

Query: 1 LNQIIFPILI 10
LN++IFP+ +
Sbjct: 157 LNELIFPVQV 166


>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 1 LNQIIFP 7
+NQI++P
Sbjct: 6 VNQILYP 12


>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)

Query: 1 LNQIIFP 7
+NQI++P
Sbjct: 6 VNQILYP 12


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 1 LNQIIFP 7
+NQI++P
Sbjct: 6 VNQILYP 12


>sp|VL2_HPV23|MINOR capsid protein L2|Human papillomavirus 23

Query: 2 NQIIFP 7
NQ+I+P
Sbjct: 469 NQVIYP 474


>sp|U91_HHV6U|UNCHARACTERIZED protein U91|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 LNQIIFP 7
LN+ IFP
Sbjct: 141 LNEAIFP 147


>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)

Query: 2 NQIIFPILI 10
N ++FP+++
Sbjct: 875 NPVLFPVVL 883


>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 NQIIFPILI 10
N ++FP+++
Sbjct: 875 NPVLFPVVL 883


>sp|NSP1_ROT41|NON-STRUCTURAL protein 1|Rotavirus A (isolate

Query: 2 NQIIFPILI 10
NQ++ PI +
Sbjct: 135 NQLLLPITL 143




94|SequenceR|475|466|GTLLGLNQII

>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 268 ILGLNKIV 275


>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 263 ILGLNKIV 270


>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 269 ILGLNKIV 276


>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 263 ILGLNKIV 270


>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 264 ILGLNKIV 271


>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 263 ILGLNKIV 270


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 270 ILGLNKIV 277


>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 273 ILGLNKIV 280


>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 265 ILGLNKIV 272


>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 269 ILGLNKIV 276


>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 266 ILGLNKIV 273


>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 263 ILGLNKIV 270


>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 263 ILGLNKIV 270


>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 263 ILGLNKIV 270


>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 265 ILGLNKIV 272


>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 268 ILGLNKIV 275


>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|GAG_HV1W2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 263 ILGLNKIV 270


>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 269 ILGLNKIV 276


>sp|GAG_HV1U4|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 263 ILGLNKIV 270


>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 264 ILGLNKIV 271


>sp|GAG_HV1N5|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 263 ILGLNKIV 270


>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 270 ILGLNKIV 277


>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 273 ILGLNKIV 280


>sp|GAG_HV1M2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|GAG_HV1J3|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|GAG_HV1ET|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 265 ILGLNKIV 272


>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 269 ILGLNKIV 276


>sp|GAG_HV19N|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 266 ILGLNKIV 273


>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 263 ILGLNKIV 270


>sp|GAG_HV196|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 263 ILGLNKIV 270


>sp|GAG_HV193|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 263 ILGLNKIV 270


>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 265 ILGLNKIV 272


>sp|GAG_HV190|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 267 ILGLNKIV 274


>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 269 VLGLNRIV 276


>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 269 VLGLNRIV 276


>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 269 VLGLNRIV 276


>sp|GAG_HV1YB|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
+LGLN+I+
Sbjct: 269 VLGLNRIV 276


>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 2 TLLGLNQII 10
TLL NQI+
Sbjct: 462 TLLASNQIL 470


>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)

Query: 2 TLLGLNQII 10
TLL NQI+
Sbjct: 462 TLLASNQIL 470


>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 3 LLGLNQII 10
L+GLNQ I
Sbjct: 357 LVGLNQRI 364


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 3 LLGLNQII 10
L+GLNQ I
Sbjct: 360 LVGLNQRI 367


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 3 LLGLNQII 10
L+GLNQ I
Sbjct: 360 LVGLNQRI 367


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 3 LLGLNQII 10
L+GLNQ I
Sbjct: 360 LVGLNQRI 367


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 3 LLGLNQII 10
L+GLNQ I
Sbjct: 358 LVGLNQRI 365


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 3 LLGLNQII 10
L+GLNQ I
Sbjct: 357 LVGLNQRI 364


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 3 LLGLNQII 10
L+GLNQ I
Sbjct: 359 LVGLNQRI 366


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 3 LLGLNQII 10
L+GLNQ I
Sbjct: 359 LVGLNQRI 366


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 3 LLGLNQII 10
L+GLNQ I
Sbjct: 359 LVGLNQRI 366


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 3 LLGLNQII 10
L+GLNQ I
Sbjct: 359 LVGLNQRI 366


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 3 LLGLNQII 10
L+GLNQ I
Sbjct: 358 LVGLNQRI 365


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 3 LLGLNQII 10
L+GLNQ I
Sbjct: 359 LVGLNQRI 366


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 3 LLGLNQII 10
L+GLNQ I
Sbjct: 359 LVGLNQRI 366


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 3 LLGLNQII 10
L+GLNQ I
Sbjct: 359 LVGLNQRI 366


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 3 LLGLNQII 10
L+GLNQ I
Sbjct: 359 LVGLNQRI 366


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 3 LLGLNQII 10
L+GLNQ I
Sbjct: 357 LVGLNQRI 364


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 3 LLGLNQII 10
L+GLNQ I
Sbjct: 357 LVGLNQRI 364


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 3 LLGLNQII 10
L+GLNQ I
Sbjct: 357 LVGLNQRI 364


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 3 LLGLNQII 10
L+GLNQ I
Sbjct: 359 LVGLNQRI 366


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 3 LLGLNQII 10
L+GLNQ I
Sbjct: 359 LVGLNQRI 366


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 3 LLGLNQII 10
L+GLNQ I
Sbjct: 357 LVGLNQRI 364


>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 3 LLGLNQII 10
+LGL+QI+
Sbjct: 164 VLGLSQIL 171


>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
++GLN+I+
Sbjct: 267 IVGLNKIV 274


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3 LLGLNQII 10
L+GLNQ +
Sbjct: 2148 LVGLNQYL 2155


>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 LLGLNQII 10
++GLN+I+
Sbjct: 267 IVGLNKIV 274




95|SequenceR|480|471|VMITFGTLLG

>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)

Query: 3 ITFGTLLG 10
+TFG LLG
Sbjct: 258 VTFGDLLG 265


>sp|VCP_VACCC|COMPLEMENT control protein C3|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 ITFGTLLG 10
+TF TLLG
Sbjct: 6 VTFLTLLG 13


>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)

Query: 3 ITFGTLLG 10
I FGT+LG
Sbjct: 157 IPFGTVLG 164


>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)

Query: 1 VMITFG 6
VM+TFG
Sbjct: 255 VMLTFG 260


>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 MITFGTL 8
M+TFG++
Sbjct: 1150 MLTFGSM 1156


>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 MITFGTL 8
M+TFG++
Sbjct: 1150 MLTFGSM 1156


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 1 VMITFGTLLG 10
V IT G +LG
Sbjct: 262 VAITLGWMLG 271


>sp|ORF1_HPBVH|UNCHARACTERIZED ORF1 protein|Human picobirnavirus (strain

Query: 5 FGTLLG 10
FG+LLG
Sbjct: 161 FGSLLG 166




96|SequenceR|485|476|YMTLVVMITF

***** No hits found ******


97|SequenceR|492|481|GIQIQGSYMTLV

>sp|VE2_HPV61|REGULATORY protein E2|Human papillomavirus type 61

Query: 1 GIQIQGSYMTL 11
GIQ YM++
Sbjct: 370 GIQATAGYMSM 380


>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 4 IQGSYM 9
IQGSY+
Sbjct: 298 IQGSYL 303


>sp|VE2_HPV45|REGULATORY protein E2|Human papillomavirus 45

Query: 2 IQIQGSYMTL 11
+QI YMT+
Sbjct: 359 VQISVGYMTI 368




THE END