HumanVirus QCR1

Max NC = 131
Total NC = 1878/3830
NC X-axis shows number of BLAST hits for
each of the NC sequences along the Y-axis

Max CN = 131
Total CN = 1952/3830
CN X-axis shows number of BLAST hits for
each of the CN sequences along the Y-axis

Seq1 = 1 Seq2 = 5 Seq4 = 3 Seq5 = 10 Seq6 = 18 Seq7 = 2 Seq8 = 5 Seq9 = 14 Seq10 = 22 Seq11 = 7 Seq13 = 2 Seq14 = 25 Seq15 = 23 Seq16 = 17 Seq17 = 13 Seq18 = 39 Seq19 = 8 Seq20 = 21 Seq21 = 3 Seq22 = 3 Seq23 = 17 Seq24 = 3 Seq25 = 8 Seq26 = 19 Seq27 = 2 Seq28 = 11 Seq29 = 10 Seq30 = 22 Seq31 = 19 Seq32 = 12 Seq33 = 4 Seq34 = 10 Seq35 = 4 Seq36 = 4 Seq37 = 39 Seq38 = 6 Seq39 = 17 Seq40 = 3 Seq41 = 49 Seq42 = 3 Seq43 = 12 Seq44 = 40 Seq45 = 9 Seq46 = 4 Seq47 = 39 Seq48 = 12 Seq49 = 35 Seq50 = 66 Seq51 = 60 Seq52 = 3 Seq53 = 12 Seq54 = 32 Seq55 = 8 Seq56 = 21 Seq57 = 2 Seq58 = 6 Seq59 = 53 Seq60 = 16 Seq61 = 2 Seq62 = 13 Seq63 = 96 Seq64 = 20 Seq65 = 62 Seq67 = 131 Seq68 = 12 Seq69 = 8 Seq70 = 47 Seq71 = 12 Seq72 = 31 Seq73 = 4 Seq74 = 3 Seq75 = 27 Seq76 = 25 Seq77 = 9 Seq78 = 4 Seq79 = 11 Seq80 = 9 Seq81 = 17 Seq82 = 46 Seq83 = 46 Seq84 = 10 Seq85 = 25 Seq86 = 17 Seq88 = 31 Seq89 = 42 Seq90 = 23 Seq91 = 25 Seq92 = 8 Seq93 = 41 Seq94 = 50 Seq95 = 38 SeqR1 = 5 SeqR2 = 2 SeqR4 = 32 SeqR5 = 4 SeqR6 = 52 SeqR9 = 6 SeqR10 = 15 SeqR11 = 13 SeqR12 = 3 SeqR13 = 3 SeqR14 = 54 SeqR15 = 26 SeqR16 = 14 SeqR17 = 15 SeqR18 = 24 SeqR19 = 7 SeqR20 = 16 SeqR21 = 4 SeqR22 = 2 SeqR23 = 2 SeqR24 = 24 SeqR25 = 4 SeqR26 = 4 SeqR27 = 2 SeqR28 = 8 SeqR29 = 6 SeqR30 = 28 SeqR31 = 11 SeqR32 = 1 SeqR33 = 29 SeqR34 = 3 SeqR36 = 11 SeqR37 = 48 SeqR38 = 15 SeqR39 = 3 SeqR40 = 9 SeqR41 = 14 SeqR42 = 5 SeqR43 = 11 SeqR44 = 10 SeqR45 = 16 SeqR47 = 7 SeqR48 = 13 SeqR49 = 8 SeqR50 = 21 SeqR51 = 131 SeqR52 = 5 SeqR53 = 42 SeqR54 = 36 SeqR55 = 11 SeqR56 = 18 SeqR57 = 11 SeqR58 = 7 SeqR59 = 63 SeqR60 = 15 SeqR61 = 2 SeqR62 = 19 SeqR63 = 63 SeqR64 = 74 SeqR65 = 16 SeqR66 = 5 SeqR67 = 12 SeqR68 = 13 SeqR69 = 12 SeqR70 = 9 SeqR71 = 50 SeqR72 = 45 SeqR73 = 2 SeqR74 = 14 SeqR75 = 43 SeqR76 = 50 SeqR77 = 11 SeqR78 = 5 SeqR79 = 14 SeqR80 = 75 SeqR81 = 111 SeqR82 = 31 SeqR83 = 22 SeqR84 = 1 SeqR85 = 16 SeqR86 = 28 SeqR87 = 3 SeqR88 = 10 SeqR89 = 45 SeqR90 = 67 SeqR91 = 27 SeqR92 = 20 SeqR93 = 38 SeqR94 = 36 SeqR95 = 14

1 MAASVVCRAA 1
2 VCRAATAGAQ 5
3 TAGAQVLLRA 0
4 VLLRARRSPA 3
5 RRSPALLRTP 10
6 LLRTPALRST 18
7 ALRSTATFAQ 2
8 ATFAQALQFV 5
9 ALQFVPETQV 14
10 PETQVSLLDN 22
11 SLLDNGLRVA 7
12 GLRVASEQSS 0
13 SEQSSQPTCT 2
14 QPTCTVGVWI 25
15 VGVWIDVGSR 23
16 DVGSRFETEK 17
17 FETEKNNGAG 13
18 NNGAGYFLEH 39
19 YFLEHLAFKG 8
20 LAFKGTKNRP 21
21 TKNRPGSALE 3
22 GSALEKEVES 3
23 KEVESMGAHL 17
24 MGAHLNAYST 3
25 NAYSTREHTA 8
26 REHTAYYIKA 19
27 YYIKALSKDL 2
28 LSKDLPKAVE 11
29 PKAVELLGDI 10
30 LLGDIVQNCS 22
31 VQNCSLEDSQ 19
32 LEDSQIEKER 12
33 IEKERDVILR 4
34 DVILREMQEN 10
35 EMQENDASMR 4
36 DASMRDVVFN 4
37 DVVFNYLHAT 39
38 YLHATAFQGT 6
39 AFQGTPLAQA 17
40 PLAQAVEGPS 3
41 VEGPSENVRK 49
42 ENVRKLSRAD 3
43 LSRADLTEYL 12
44 LTEYLSTHYK 40
45 STHYKAPRMV 9
46 APRMVLAAAG 4
47 LAAAGGVEHQ 39
48 GVEHQQLLDL 12
49 QLLDLAQKHL 35
50 AQKHLGGIPW 66
51 GGIPWTYAED 60
52 TYAEDAVPTL 3
53 AVPTLTPCRF 12
54 TPCRFTGSEI 32
55 TGSEIRHRDD 8
56 RHRDDALPFA 21
57 ALPFAHVAIA 2
58 HVAIAVEGPG 6
59 VEGPGWASPD 53
60 WASPDNVALQ 16
61 NVALQVANAI 2
62 VANAIIGHYD 13
63 IGHYDCTYGG 96
64 CTYGGGVHLS 20
65 GVHLSSPLAS 62
66 SPLASGAVAN 0
67 GAVANKLCQS 131
68 KLCQSFQTFS 12
69 FQTFSICYAE 8
70 ICYAETGLLG 47
71 TGLLGAHFVC 12
72 AHFVCDRMKI 31
73 DRMKIDDMMF 4
74 DDMMFVLQGQ 3
75 VLQGQWMRLC 27
76 WMRLCTSATE 25
77 TSATESEVAR 9
78 SEVARGKNIL 4
79 GKNILRNALV 11
80 RNALVSHLDG 9
81 SHLDGTTPVC 17
82 TTPVCEDIGR 46
83 EDIGRSLLTY 46
84 SLLTYGRRIP 10
85 GRRIPLAEWE 25
86 LAEWESRIAE 17
87 SRIAEVDASV 0
88 VDASVVREIC 31
89 VREICSKYIY 42
90 SKYIYDQCPA 23
91 DQCPAVAGYG 25
92 VAGYGPIEQL 8
93 PIEQLPDYNR 41
94 PDYNRIRSGMFWLRF 50
95 IRSGMFWLRF 38

1 AARCVVSAAM 5
2 QAGATAARCV 2
3 ARLLVQAGAT 0
4 APSRRARLLV 32
5 PTRLLAPSRR 4
6 TSRLAPTRLL 52
7 QAFTATSRLA 0
8 VFQLAQAFTA 0
9 VQTEPVFQLA 6
10 NDLLSVQTEP 15
11 AVRLGNDLLS 13
12 SSQESAVRLG 3
13 TCTPQSSQES 3
14 IWVGVTCTPQ 54
15 RSGVDIWVGV 26
16 KETEFRSGVD 14
17 GAGNNKETEF 15
18 HELFYGAGNN 24
19 GKFALHELFY 7
20 PRNKTGKFAL 16
21 ELASGPRNKT 4
22 SEVEKELASG 2
23 LHAGMSEVEK 2
24 TSYANLHAGM 24
25 ATHERTSYAN 4
26 AKIYYATHER 4
27 LDKSLAKIYY 2
28 EVAKPLDKSL 8
29 IDGLLEVAKP 6
30 SCNQVIDGLL 28
31 QSDELSCNQV 11
32 REKEIQSDEL 1
33 RLIVDREKEI 29
34 NEQMERLIVD 3
35 RMSADNEQME 0
36 NFVVDRMSAD 11
37 TAHLYNFVVD 48
38 TGQFATAHLY 15
39 AQALPTGQFA 3
40 SPGEVAQALP 9
41 KRVNESPGEV 14
42 DARSLKRVNE 5
43 LYETLDARSL 11
44 KYHTSLYETL 10
45 VMRPAKYHTS 16
46 GAAALVMRPA 0
47 QHEVGGAAAL 7
48 LDLLQQHEVG 13
49 LHKQALDLLQ 8
50 WPIGGLHKQA 21
51 DEAYTWPIGG 131
52 LTPVADEAYT 5
53 FRCPTLTPVA 42
54 IESGTFRCPT 36
55 DDRHRIESGT 11
56 AFPLADDRHR 18
57 AIAVHAFPLA 11
58 GPGEVAIAVH 7
59 DPSAWGPGEV 63
60 QLAVNDPSAW 15
61 IANAVQLAVN 2
62 DYHGIIANAV 19
63 GGYTCDYHGI 63
64 SLHVGGGYTC 74
65 SALPSSLHVG 16
66 NAVAGSALPS 5
67 SQCLKNAVAG 12
68 SFTQFSQCLK 13
69 EAYCISFTQF 12
70 GLLGTEAYCI 9
71 CVFHAGLLGT 50
72 IKMRDCVFHA 45
73 FMMDDIKMRD 2
74 QGQLVFMMDD 14
75 CLRMWQGQLV 43
76 ETASTCLRMW 50
77 RAVESETAST 11
78 LINKGRAVES 5
79 VLANRLINKG 14
80 GDLHSVLANR 75
81 CVPTTGDLHS 111
82 RGIDECVPTT 31
83 YTLLSRGIDE 22
84 PIRRGYTLLS 1
85 EWEALPIRRG 16
86 EAIRSEWEAL 28
87 VSADVEAIRS 3
88 CIERVVSADV 10
89 YIYKSCIERV 45
90 APCQDYIYKS 67
91 GYGAVAPCQD 27
92 LQEIPGYGAV 20
93 RNYDPLQEIP 38
94 FRLWFMGSRIRNYDP 36
95 FRLWFMGSRI 14