QCR1_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|AARCVVSAAM

>sp|RS13_ARCFU|SMALL ribosomal subunit protein uS13|Archaeoglobus fulgidus (strain

Query: 1 AARCVVS 7
AARC+V+
Sbjct: 34 AARCIVN 40


>sp|DAPF_METKA|DIAMINOPIMELATE epimerase|Methanopyrus kandleri (strain AV19 /

Query: 1 AARCVV 6
AARCVV
Sbjct: 76 AARCVV 81




2|SequenceR|15|6|QAGATAARCV

>sp|MTAD_PYRAB|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus abyssi (strain GE5 /

Query: 2 AGATAARC 9
AGAT A C
Sbjct: 263 AGATIAHC 270


>sp|ACEB_HALVD|MALATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 3 GATAARCV 10
GA+AA CV
Sbjct: 219 GASAAGCV 226




3|SequenceR|20|11|ARLLVQAGAT

>sp|GGGPS_AERPE|GERANYLGERANYLGLYCERYL phosphate synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ARLLVQAGA 9
AR+L +AGA
Sbjct: 220 ARMLAEAGA 228




4|SequenceR|25|16|APSRRARLLV

>sp|MT51_METJA|PUTATIVE type II methyltransferase M.MJ0563P|Methanocaldococcus jannaschii

Query: 2 PSRRARLLV 10
PS+RAR+ +
Sbjct: 162 PSKRARMFI 170




5|SequenceR|30|21|PTRLLAPSRR

>sp|RNH2_METTP|RIBONUCLEASE HII|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 TRLLAPSRR 10
++LL+P+RR
Sbjct: 42 SKLLSPTRR 50


>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 4 LLAPSRR 10
L+APSRR
Sbjct: 395 LVAPSRR 401




6|SequenceR|35|26|TSRLAPTRLL

>sp|CAPPA_SACS2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SRLAPTRLL 10
SR++P R+L
Sbjct: 307 SRISPARIL 315


>sp|RSMA_AERPE|PROBABLE ribosomal RNA small subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 SRLAPTRL 9
SRLAP R+
Sbjct: 96 SRLAPARV 103




7|SequenceR|40|31|QAFTATSRLA

>sp|KGSDH_SACS2|2,5-DIOXOPENTANOATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QAFTATSRL 9
Q+ TATSRL
Sbjct: 281 QSCTATSRL 289




8|SequenceR|45|36|VFQLAQAFTA

>sp|SYDND_METVS|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VFQLAQAFTA 10
VF++AQ F A
Sbjct: 212 VFEIAQIFRA 221


>sp|SYDND_METMP|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VFQLAQAFTA 10
VF++AQ F A
Sbjct: 212 VFEIAQIFRA 221


>sp|SYDND_METM7|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C7 /

Query: 1 VFQLAQAFTA 10
VF++AQ F A
Sbjct: 212 VFEIAQIFRA 221


>sp|SYDND_METM6|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C6 /

Query: 1 VFQLAQAFTA 10
VF++AQ F A
Sbjct: 212 VFEIAQIFRA 221


>sp|SYDND_METM5|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C5 /

Query: 1 VFQLAQAFTA 10
VF++AQ F A
Sbjct: 212 VFEIAQIFRA 221


>sp|TRPA_ARCFU|TRYPTOPHAN synthase alpha chain|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VFQLAQAFTA 10
VF++A+AF A
Sbjct: 67 VFEIAKAFRA 76




9|SequenceR|50|41|VQTEPVFQLA

>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VQTEPV 6
VQTEPV
Sbjct: 277 VQTEPV 282


>sp|LONB_THEVO|ARCHAEAL Lon protease|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VQTEPV 6
VQTEPV
Sbjct: 277 VQTEPV 282




10|SequenceR|55|46|NDLLSVQTEP

>sp|PUR5_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NDLLSVQTEP 10
NDLL++ +EP
Sbjct: 87 NDLLAIGSEP 96


>sp|PUR5_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NDLLSVQTEP 10
NDLL++ EP
Sbjct: 90 NDLLAIGAEP 99


>sp|PUR5_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NDLLSVQTEP 10
NDLL++ EP
Sbjct: 90 NDLLAIGAEP 99


>sp|PUR5_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NDLLSVQTEP 10
NDLL++ EP
Sbjct: 90 NDLLAIGAEP 99


>sp|PUR5_METBU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 NDLLSVQTEP 10
NDLL++ EP
Sbjct: 90 NDLLAIGAEP 99


>sp|PUR5_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 NDLLSVQTEP 10
NDLL V EP
Sbjct: 90 NDLLCVGAEP 99


>sp|PUR5_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 NDLLSVQTEP 10
NDLL V EP
Sbjct: 90 NDLLCVGAEP 99


>sp|PUR5_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 NDLLSVQTEP 10
NDLL V EP
Sbjct: 89 NDLLCVGAEP 98


>sp|RPO11_HALWD|DNA-DIRECTED RNA polymerase subunit Rpo11|Haloquadratum walsbyi (strain DSM

Query: 3 LLSVQTEP 10
+LS+QTEP
Sbjct: 57 VLSIQTEP 64


>sp|PUR5_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NDLLSVQTEP 10
NDL+ V EP
Sbjct: 89 NDLICVGAEP 98


>sp|PUR5_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NDLLSVQTEP 10
NDL+ V EP
Sbjct: 89 NDLICVGAEP 98


>sp|GSA_PICTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Picrophilus torridus (strain ATCC 700027

Query: 1 NDLLSVQTEP 10
ND+ +V TEP
Sbjct: 192 NDIAAVITEP 201


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 DLLSVQTE 9
D LSVQTE
Sbjct: 764 DTLSVQTE 771


>sp|PUR5_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 NDLLSVQTEP 10
ND+L V EP
Sbjct: 85 NDILCVGAEP 94


>sp|COFC_METPS|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocella paludicola (strain DSM 17711

Query: 1 NDLLSVQTEP 10
ND LS +EP
Sbjct: 73 NDFLSSASEP 82




11|SequenceR|60|51|AVRLGNDLLS

>sp|DUT_ARCFU|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Archaeoglobus

Query: 2 VRLGNDLLS 10
VRLGND+++
Sbjct: 86 VRLGNDIMA 94


>sp|G1PDH_PYRAB|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus abyssi (strain GE5 /

Query: 2 VRLGND 7
+RLGND
Sbjct: 211 IRLGND 216


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 VRLGNDL 8
+R+GNDL
Sbjct: 1019 LRIGNDL 1025


>sp|RL31_METKA|LARGE ribosomal subunit protein eL31|Methanopyrus kandleri (strain AV19

Query: 2 VRLGNDL 8
VR+GND+
Sbjct: 46 VRIGNDV 52


>sp|ARLY_NITMS|ARGININOSUCCINATE lyase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 RLGNDL 8
RLGNDL
Sbjct: 5 RLGNDL 10


>sp|MEND_HALLT|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 RLGNDLLS 10
RLGN+L++
Sbjct: 220 RLGNELMT 227


>sp|PYRB_METBU|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcoides burtonii

Query: 2 VRLGNDLLS 10
+RLG D+LS
Sbjct: 67 MRLGGDVLS 75




12|SequenceR|65|56|SSQESAVRLG

>sp|YD5A_METJA|UNCHARACTERIZED protein MJ1351.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SSQESAVR 8
SS+ESA+R
Sbjct: 331 SSEESAIR 338


>sp|Y952_ARCFU|UNCHARACTERIZED protein AF_0952|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SSQESAVR 8
SS+ESA+R
Sbjct: 334 SSEESAIR 341


>sp|RS3A_THESM|SMALL ribosomal subunit protein eS1|Thermococcus sibiricus (strain DSM

Query: 1 SSQESAVR 8
SSQE AVR
Sbjct: 135 SSQERAVR 142


>sp|EF2_METTE|ELONGATION factor 2|Methanosarcina thermophila

Query: 2 SQESAVRLG 10
SQE VRLG
Sbjct: 161 SQEMQVRLG 169


>sp|EF2_METMA|ELONGATION factor 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SQESAVRLG 10
SQE VRLG
Sbjct: 161 SQEMQVRLG 169


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 SQESAVRLG 10
SQE +RLG
Sbjct: 161 SQEMQIRLG 169


>sp|EF2_METAC|ELONGATION factor 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 SQESAVRLG 10
SQE +RLG
Sbjct: 161 SQEMQIRLG 169




13|SequenceR|70|61|TCTPQSSQES

>sp|CIMA_METJA|(R)-CITRAMALATE synthase CimA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TPQSSQE 9
TPQ SQE
Sbjct: 170 TPQKSQE 176


>sp|TIAS_HALWD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Haloquadratum walsbyi (strain

Query: 1 TCTPQSSQES 10
TCTP S +S
Sbjct: 97 TCTPHSVADS 106




14|SequenceR|75|66|IWVGVTCTPQ

>sp|TRM1_HALMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloarcula marismortui

Query: 1 IWVGVTCTPQ 10
IW+G TC P+
Sbjct: 267 IWLGRTCDPE 276


>sp|SYH_METMJ|HISTIDINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 VGVTCTPQ 10
VGV CTP+
Sbjct: 320 VGVVCTPE 327


>sp|IF2P_PYRAB|PROBABLE translation initiation factor IF-2|Pyrococcus abyssi (strain GE5 /

Query: 2 WVGVTCTPQ 10
W GVT TP+
Sbjct: 98 WHGVTVTPE 106


>sp|AROK_AERPE|SHIKIMATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 IWVGVTCTPQ 10
+W GV+ TP+
Sbjct: 41 LWAGVSLTPR 50


>sp|RNP4_METB6|RIBONUCLEASE P protein component 4|Methanoregula boonei (strain DSM 21154

Query: 2 WVGVTC 7
WV VTC
Sbjct: 84 WVAVTC 89


>sp|Y1225_ARCFU|UNCHARACTERIZED protein AF_1225|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VGVTCTP 9
+G+ CTP
Sbjct: 59 IGINCTP 65


>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 3 VGVTCTP 9
+GV CTP
Sbjct: 70 IGVVCTP 76


>sp|SYK_METKA|LYSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 IWVGVTCTP 9
+++GV C P
Sbjct: 251 VYLGVACEP 259


>sp|SYK_METTH|LYSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 VGVTCTP 9
+GVTC P
Sbjct: 244 LGVTCEP 250


>sp|SYH_METLZ|HISTIDINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 VGVTCTPQ 10
V V CTP+
Sbjct: 320 VAVICTPE 327


>sp|RNZ_ARCFU|RIBONUCLEASE Z|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IWVGVTCTP 9
+W G T TP
Sbjct: 183 VWKGRTITP 191


>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 WVGVTCTP 9
W+ V C P
Sbjct: 726 WMAVRCDP 733




15|SequenceR|80|71|RSGVDIWVGV

>sp|Y1239_METJA|UNCHARACTERIZED protein MJ1239|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RSGVDIWVGV 10
R DIWVG+
Sbjct: 109 RCSRDIWVGI 118


>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 GVDIWVGV 10
GVD WVG+
Sbjct: 114 GVDAWVGI 121


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 GVDIWVGV 10
GVD WVG+
Sbjct: 114 GVDAWVGI 121


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GVDIWVGV 10
GVD WVG+
Sbjct: 114 GVDAWVGI 121


>sp|Y600_ARCFU|UNCHARACTERIZED protein AF_0600|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RSGVDIWVG 9
R+ +D+W+G
Sbjct: 139 RNPIDVWIG 147


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 GVDIWVGV 10
GVD WVG+
Sbjct: 114 GVDAWVGI 121


>sp|ILVD_PYRIL|DIHYDROXY-ACID dehydratase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 GVDIWVGV 10
G+D WVG+
Sbjct: 114 GIDAWVGI 121


>sp|OGT_THEGJ|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 SGVDIWVGV 10
+G DIW+GV
Sbjct: 10 NGRDIWIGV 18


>sp|RTCA_METBF|RNA 3'-terminal phosphate cyclase|Methanosarcina barkeri (strain Fusaro

Query: 2 SGVDIWVG 9
SG+ +W+G
Sbjct: 231 SGITLWIG 238


>sp|Y2093_ARCFU|UNCHARACTERIZED protein AF_2093|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RSGVDIWV 8
R+G+ IWV
Sbjct: 193 RAGLKIWV 200


>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 1 RSGVDIWVGV 10
R G+DIW +
Sbjct: 325 RMGLDIWTPI 334


>sp|COFG_METJA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SGVDIWVGV 10
+GVD W GV
Sbjct: 287 AGVDDWGGV 295


>sp|COFG_META3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 SGVDIWVGV 10
+GVD W GV
Sbjct: 292 AGVDDWGGV 300


>sp|ILVC_METKA|KETOL-ACID reductoisomerase (NADP(+))|Methanopyrus kandleri (strain AV19 /

Query: 2 SGVDIWVGV 10
SG+D+ +GV
Sbjct: 39 SGIDVIIGV 47


>sp|Y1207_METJA|UNCHARACTERIZED N-acetyltransferase MJ1207|Methanocaldococcus jannaschii (strain

Query: 1 RSGVDIWVGV 10
R V++WVGV
Sbjct: 187 RRIVELWVGV 196


>sp|COFG_METMP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 SGVDIWVGV 10
+G+D W GV
Sbjct: 265 AGIDDWGGV 273


>sp|COFG_METM7|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C7 /

Query: 2 SGVDIWVGV 10
+G+D W GV
Sbjct: 287 AGIDDWGGV 295


>sp|COFG_METM6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C6 /

Query: 2 SGVDIWVGV 10
+G+D W GV
Sbjct: 287 AGIDDWGGV 295


>sp|COFG_METM5|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C5 /

Query: 2 SGVDIWVGV 10
+G+D W GV
Sbjct: 287 AGIDDWGGV 295


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 2 SGVDIWV 8
+GVD+W+
Sbjct: 570 AGVDVWL 576


>sp|IF6_THEKO|TRANSLATION initiation factor 6|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GVDIWVG 9
GVDI+VG
Sbjct: 181 GVDIYVG 187


>sp|ILVC_HALMA|KETOL-ACID reductoisomerase (NADP(+))|Haloarcula marismortui (strain ATCC

Query: 2 SGVDIWVGV 10
SGVD+ VG+
Sbjct: 44 SGVDVIVGL 52


>sp|RL37A_METM5|LARGE ribosomal subunit protein eL43|Methanococcus maripaludis (strain

Query: 1 RSGVDIWV 8
R+G IWV
Sbjct: 51 RAGTSIWV 58


>sp|RL37A_METVS|LARGE ribosomal subunit protein eL43|Methanococcus vannielii (strain

Query: 1 RSGVDIWV 8
R+G IWV
Sbjct: 51 RAGTSIWV 58


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 SGVDIW 7
+G+D+W
Sbjct: 1369 TGIDVW 1374


>sp|SYR_SULTO|ARGININE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 VDIWVGV 10
+D W+GV
Sbjct: 181 IDQWIGV 187


>sp|RL37A_METMP|LARGE ribosomal subunit protein eL43|Methanococcus maripaludis (strain

Query: 1 RSGVDIWV 8
R+G IWV
Sbjct: 51 RAGTSIWV 58


>sp|Y486_METJA|UNCHARACTERIZED protein MJ0486|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SGVDIWV 8
+G DIW+
Sbjct: 154 NGYDIWI 160


>sp|PURE_METTH|PROBABLE N5-carboxyaminoimidazole ribonucleotide

Query: 1 RSGVDIWVGV 10
++GV++++G+
Sbjct: 55 KAGVEVFIGI 64


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 2 SGVDIWVG 9
+GV++W G
Sbjct: 548 NGVELWSG 555


>sp|Y273_METKA|UPF0235 protein MK0273|Methanopyrus kandleri (strain AV19 /

Query: 3 GVDIWVGV 10
GVD W GV
Sbjct: 29 GVDEWRGV 36


>sp|ILVC_NATPD|KETOL-ACID reductoisomerase (NADP(+))|Natronomonas pharaonis (strain ATCC

Query: 2 SGVDIWVGV 10
SGVD+ VG+
Sbjct: 41 SGVDVVVGL 49


>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 3 GVDIWVGV 10
G D WVG+
Sbjct: 112 GFDGWVGI 119


>sp|PT1_HALVD|PHOSPHOENOLPYRUVATE-PROTEIN phosphotransferase|Haloferax volcanii (strain ATCC 29605

Query: 3 GVDIWVGV 10
G D WVG+
Sbjct: 490 GEDCWVGM 497


>sp|ILVC_HALWD|KETOL-ACID reductoisomerase (NADP(+))|Haloquadratum walsbyi (strain DSM

Query: 2 SGVDIWVGV 10
SG+D+ VG+
Sbjct: 63 SGIDVIVGL 71




16|SequenceR|85|76|KETEFRSGVD

***** No hits found ******


17|SequenceR|90|81|GAGNNKETEF

>sp|PSA_ARCFU|PROTEASOME subunit alpha|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GAGNNKETEF 10
G G N TEF
Sbjct: 165 GMGRNAVTEF 174




18|SequenceR|95|86|HELFYGAGNN

>sp|G1PDH_ARCFU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HELFYGAGN 9
HE +YG G+
Sbjct: 278 HEKYYGRGD 286


>sp|Y077_METJA|UNCHARACTERIZED protein MJ0077|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LFYGAGNN 10
+FYG G N
Sbjct: 292 VFYGGGTN 299


>sp|Y107_METJA|UNCHARACTERIZED protein MJ0107|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LFYGAGN 9
LF+G GN
Sbjct: 336 LFFGVGN 342


>sp|COBD_ARCFU|PROBABLE cobalamin biosynthesis protein CobD|Archaeoglobus fulgidus

Query: 2 ELFYGA 7
E+FYGA
Sbjct: 49 EIFYGA 54


>sp|Y053_NANEQ|UNCHARACTERIZED RNA methyltransferase NEQ053|Nanoarchaeum equitans (strain

Query: 5 YGAGNN 10
YG GNN
Sbjct: 39 YGVGNN 44


>sp|URE1_NATPD|UREASE subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 4 FYGAGNN 10
FYG GN+
Sbjct: 195 FYGKGNS 201


>sp|NCPP_SULTO|PROBABLE inosine/xanthosine triphosphatase|Sulfurisphaera tokodaii (strain

Query: 1 HELFYGAGN 9
HE F GA N
Sbjct: 45 HETFVGAKN 53


>sp|URE1_HALMA|UREASE subunit alpha|Haloarcula marismortui (strain ATCC 43049

Query: 4 FYGAGN 9
FYG GN
Sbjct: 193 FYGKGN 198


>sp|AGL6_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl6|Haloferax volcanii

Query: 3 LFYGAG 8
+FYGAG
Sbjct: 185 VFYGAG 190


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 3 LFYGAGN 9
LFYG G+
Sbjct: 323 LFYGGGH 329




19|SequenceR|100|91|GKFALHELFY

>sp|FTR_METBF|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 KFALHELF 9
+F LHELF
Sbjct: 290 QFKLHELF 297


>sp|FTR_METAC|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KFALHELF 9
+F LHELF
Sbjct: 290 QFKLHELF 297


>sp|FTR_METMA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KFALHELF 9
+F LHELF
Sbjct: 290 QFKLHELF 297


>sp|SRP54_META3|SIGNAL recognition particle 54 kDa|Methanococcus aeolicus (strain ATCC

Query: 1 GKFALHELF 9
GKF L+EL+
Sbjct: 324 GKFTLNELY 332


>sp|THTR_HALVD|PUTATIVE thiosulfate sulfurtransferase|Haloferax volcanii (strain ATCC 29605

Query: 3 FALHELF 9
FALHEL
Sbjct: 253 FALHELL 259


>sp|HYPA_PYRFU|HYDROGENASE maturation factor HypA|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KFALHELF 9
KFA+ ELF
Sbjct: 45 KFAMEELF 52


>sp|RADA_PYRAE|DNA repair and recombination protein|Pyrobaculum aerophilum (strain

Query: 4 ALHELFY 10
ALH +FY
Sbjct: 185 ALHNIFY 191


>sp|KHSE_METMP|HOMOSERINE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 3 FALHELF 9
FAL+ELF
Sbjct: 106 FALNELF 112


>sp|KHSE_METM7|HOMOSERINE kinase|Methanococcus maripaludis (strain C7 /

Query: 3 FALHELF 9
FAL+ELF
Sbjct: 106 FALNELF 112


>sp|KHSE_METM6|HOMOSERINE kinase|Methanococcus maripaludis (strain C6 /

Query: 3 FALHELF 9
FAL+ELF
Sbjct: 106 FALNELF 112


>sp|KHSE_METM5|HOMOSERINE kinase|Methanococcus maripaludis (strain C5 /

Query: 3 FALHELF 9
FAL+ELF
Sbjct: 106 FALNELF 112


>sp|SRP54_METVS|SIGNAL recognition particle 54 kDa|Methanococcus vannielii (strain ATCC

Query: 1 GKFALHELF 9
GKF L EL+
Sbjct: 324 GKFTLVELY 332


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GKFALHELFY 10
K AL+EL Y
Sbjct: 678 AKVALYELLY 687


>sp|SRP54_METMP|SIGNAL recognition particle 54 kDa|Methanococcus maripaludis (strain DSM

Query: 1 GKFALHELF 9
GKF L EL+
Sbjct: 324 GKFTLIELY 332


>sp|SRP54_METM7|SIGNAL recognition particle 54 kDa|Methanococcus maripaludis (strain C7 /

Query: 1 GKFALHELF 9
GKF L EL+
Sbjct: 324 GKFTLIELY 332


>sp|SRP54_METM6|SIGNAL recognition particle 54 kDa|Methanococcus maripaludis (strain C6 /

Query: 1 GKFALHELF 9
GKF L EL+
Sbjct: 324 GKFTLIELY 332


>sp|SRP54_METM5|SIGNAL recognition particle 54 kDa|Methanococcus maripaludis (strain C5 /

Query: 1 GKFALHELF 9
GKF L EL+
Sbjct: 324 GKFTLIELY 332


>sp|AKSA_METTH|HOMOCITRATE synthase AksA|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GKFALHELFY 10
GK+ ELFY
Sbjct: 370 GKYINDELFY 379


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 GKFALHELFY 10
K AL+EL Y
Sbjct: 678 AKVALYELLY 687


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GKFALHELFY 10
K AL+EL Y
Sbjct: 678 AKVALYELLY 687


>sp|CMR1_SACS2|CRISPR system CMR subunit Cmr1|Saccharolobus solfataricus (strain ATCC

Query: 2 KFALHELF 9
KFALH L
Sbjct: 228 KFALHSLL 235




20|SequenceR|105|96|PRNKTGKFAL

>sp|RS4E_METKA|SMALL ribosomal subunit protein eS4|Methanopyrus kandleri (strain AV19

Query: 1 PRNKTGKFA 9
PR + GKFA
Sbjct: 24 PRKEGGKFA 32


>sp|RL13_SULTO|LARGE ribosomal subunit protein uL13|Sulfurisphaera tokodaii (strain

Query: 1 PRNKTGKF 8
P+NK+GK
Sbjct: 89 PKNKSGKM 96


>sp|TRM1_PYRHO|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus horikoshii

Query: 3 NKTGKFAL 10
+KTGKF L
Sbjct: 257 DKTGKFEL 264


>sp|GGR_METAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 NKTGKF 8
N+TGKF
Sbjct: 228 NRTGKF 233


>sp|GCSPB_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 PRNKTGKFA 9
P+N GK A
Sbjct: 322 PKNSVGKIA 330


>sp|GCSPB_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 PRNKTGKFA 9
P+N GK A
Sbjct: 322 PKNSVGKIA 330


>sp|GCSPB_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 PRNKTGKFA 9
P+N GK A
Sbjct: 322 PKNSVGKIA 330


>sp|GCSPB_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 PRNKTGKFA 9
P+N GK A
Sbjct: 322 PKNSVGKIA 330


>sp|GCSPB_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 PRNKTGKFA 9
P+N GK A
Sbjct: 322 PKNSVGKIA 330


>sp|GCSPB_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 PRNKTGKFA 9
P+N GK A
Sbjct: 322 PKNSVGKIA 330


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 RNKTGKFA 9
R KTGK+A
Sbjct: 299 RIKTGKYA 306


>sp|NIFE_METTM|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 3 NKTGKFAL 10
NKTGK+ +
Sbjct: 171 NKTGKWVI 178




21|SequenceR|110|101|ELASGPRNKT

>sp|COBS_METAR|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanocella arvoryzae (strain DSM 22066

Query: 2 LASGPRNK 9
+ASGPR K
Sbjct: 93 IASGPREK 100


>sp|Y4342_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 ELASGPRN 8
E+A GPRN
Sbjct: 99 EIAFGPRN 106


>sp|FUMC_HALSA|FUMARATE hydratase class II|Halobacterium salinarum (strain ATCC 700922

Query: 2 LASGPRN 8
LASGPRN
Sbjct: 298 LASGPRN 304


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 1 ELASGPRNKT 10
++A GPRN +
Sbjct: 963 DIAGGPRNSS 972


>sp|CBIZ_METMA|ADENOSYLCOBINAMIDE amidohydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 SGPRNKT 10
SGP++KT
Sbjct: 160 SGPKSKT 166




22|SequenceR|115|106|SEVEKELASG

>sp|PSB_HALLT|PROTEASOME subunit beta|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 SEVEKELASG 10
S VE++LASG
Sbjct: 209 SAVERDLASG 218


>sp|PSB_HALWD|PROTEASOME subunit beta|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SEVEKELASG 10
S VE++LASG
Sbjct: 209 SAVERDLASG 218


>sp|PSB_HALVD|PROTEASOME subunit beta|Haloferax volcanii (strain ATCC 29605

Query: 1 SEVEKELASG 10
S VE++LASG
Sbjct: 209 SAVERDLASG 218


>sp|RL11_METTP|LARGE ribosomal subunit protein uL11|Methanothrix thermoacetophila

Query: 2 EVEKELASG 10
EV+K LASG
Sbjct: 141 EVQKALASG 149


>sp|FLPA_THEGJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus gammatolerans (strain

Query: 2 EVEKELAS 9
EVE+ELAS
Sbjct: 194 EVERELAS 201


>sp|FLPA_THEON|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus onnurineus (strain

Query: 2 EVEKELAS 9
EVEKELA+
Sbjct: 194 EVEKELAT 201


>sp|Y1422_METBF|MEMO1 family protein Mbar_A1422|Methanosarcina barkeri (strain Fusaro /

Query: 2 EVEKELASG 10
EV++ELA G
Sbjct: 95 EVDRELAEG 103


>sp|HDLA_ARCPA|HETERODISULFIDE reductase subunit A-like protein|Archaeoglobus profundus (strain

Query: 1 SEVEKELASG 10
SEV+KE SG
Sbjct: 620 SEVDKEKCSG 629


>sp|Y888_METJA|PROBABLE metallo-hydrolase MJ0888|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SEVEKELAS 9
SE+E+EL S
Sbjct: 111 SEIEEELKS 119


>sp|PFDA_SULTO|PREFOLDIN subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SEVEKELA 8
S VEKELA
Sbjct: 116 SNVEKELA 123




23|SequenceR|120|111|LHAGMSEVEK

>sp|MOAA_METS5|PROBABLE GTP 3',8-cyclase|Metallosphaera sedula (strain ATCC 51363

Query: 1 LHAGMSEVEK 10
H GM E+EK
Sbjct: 197 FHQGMEELEK 206


>sp|GLNA_HALVD|GLUTAMINE synthetase|Haloferax volcanii (strain ATCC 29605

Query: 1 LHAGMSEVEK 10
+HAG+ VEK
Sbjct: 363 IHAGLDGVEK 372


>sp|IMDH_KORCO|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 HAGMSEV 8
H+GMSE+
Sbjct: 457 HSGMSEI 463


>sp|AROE_IGNH4|SHIKIMATE dehydrogenase (NADP(+))|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 HAGMSEVEK 10
+AG++EV+K
Sbjct: 161 YAGLNEVDK 169


>sp|SYP_METAR|PROLINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 HAGMSEVE 9
H G+SE+E
Sbjct: 96 HGGLSELE 103


>sp|FSX1_HALSH|FUSEXIN 1|Haloplanus natans (strain DSM 17983

Query: 1 LHAGMSEVE 9
+H G SE+E
Sbjct: 63 VHLGASEIE 71


>sp|Y994_METTH|PUTATIVE aminohydrolase MTH_994|Methanothermobacter thermautotrophicus

Query: 4 GMSEVEK 10
GMSEVE+
Sbjct: 223 GMSEVER 229


>sp|KORA_METTH|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter thermautotrophicus

Query: 3 AGMSEVE 9
AGM+EVE
Sbjct: 346 AGMAEVE 352




24|SequenceR|125|116|TSYANLHAGM

>sp|CSD_AERPE|PROBABLE cysteine desulfurase|Aeropyrum pernix (strain ATCC 700893

Query: 2 SYANLHAGM 10
SYAN+H G+
Sbjct: 46 SYANVHRGV 54


>sp|ARLY_METHJ|ARGININOSUCCINATE lyase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 SYANLHAGM 10
SY ++HAG+
Sbjct: 81 SYEDIHAGI 89


>sp|RS7_PICTO|SMALL ribosomal subunit protein uS7|Picrophilus torridus (strain ATCC

Query: 2 SYANLHAG 9
SY NLH G
Sbjct: 29 SYFNLHTG 36


>sp|LYSJ_SULTO|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfurisphaera

Query: 1 TSYANLHAGM 10
T Y +LH G+
Sbjct: 28 TKYLDLHTGI 37




25|SequenceR|130|121|ATHERTSYAN

>sp|DPH2_METJA|2-(3-AMINO-3-CARBOXYPROPYL)HISTIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HERTSYAN 10
HE+ SYAN
Sbjct: 103 HEKLSYAN 110


>sp|RISB_METMA|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ATHERTSYA 9
A HER YA
Sbjct: 112 AAHERVDYA 120


>sp|RISB_METBF|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ATHERTSYA 9
A HER YA
Sbjct: 112 AAHERVDYA 120


>sp|RISB_METAC|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ATHERTSYA 9
A HER YA
Sbjct: 112 AAHERVDYA 120


>sp|SYFB_METMJ|PHENYLALANINE--TRNA ligase beta subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 THERTSYAN 10
T+ER YAN
Sbjct: 381 TNERVLYAN 389


>sp|HPRL3_HALTV|HGPRTASE-LIKE protein 3|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 ATHERTSYA 9
A H+ TSY
Sbjct: 98 AVHQETSYG 106




26|SequenceR|135|126|AKIYYATHER

>sp|TRMY_METVS|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus vannielii

Query: 3 IYYATHE 9
IYY+ HE
Sbjct: 106 IYYSNHE 112


>sp|LYSY_PYRHO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 4 YYATHER 10
YY HER
Sbjct: 106 YYGKHER 112


>sp|OGG1_SACS2|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus solfataricus (strain ATCC

Query: 2 KIYYATHE 9
KIYYA E
Sbjct: 61 KIYYANEE 68


>sp|OGG1_SACI1|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus islandicus (strain

Query: 2 KIYYATHE 9
KIYYA E
Sbjct: 61 KIYYANEE 68


>sp|OGG1_SACI7|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus islandicus (strain

Query: 2 KIYYATHE 9
KIYYA E
Sbjct: 61 KIYYANEE 68


>sp|OGG1_SACI6|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus islandicus (strain M.16.4

Query: 2 KIYYATHE 9
KIYYA E
Sbjct: 61 KIYYANEE 68


>sp|OGG1_SACI4|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus islandicus (strain M.14.25

Query: 2 KIYYATHE 9
KIYYA E
Sbjct: 61 KIYYANEE 68


>sp|OGG1_SACI3|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus islandicus (strain

Query: 2 KIYYATHE 9
KIYYA E
Sbjct: 61 KIYYANEE 68


>sp|OGG1_SACI2|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus islandicus (strain

Query: 2 KIYYATHE 9
KIYYA E
Sbjct: 61 KIYYANEE 68


>sp|ARGC_METMJ|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 KIYYATHE 9
KIY THE
Sbjct: 108 KIYGVTHE 115




27|SequenceR|140|131|LDKSLAKIYY

>sp|TRUD_PYRIL|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum islandicum (strain DSM

Query: 1 LDKSLAKIYY 10
DKSL +YY
Sbjct: 7 FDKSLGMLYY 16


>sp|Y1004_METJA|UNCHARACTERIZED protein MJ1004|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDKSLAKIY 9
+DK+ AKIY
Sbjct: 7 MDKNFAKIY 15


>sp|AATC_THEKO|A-TYPE ATP synthase subunit C|Thermococcus kodakarensis (strain ATCC

Query: 1 LDKSLAKIY 9
LD SLAK Y
Sbjct: 94 LDASLAKTY 102


>sp|TRUD_PYRNV|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum neutrophilum (strain

Query: 1 LDKSLAKIYY 10
D+SL +YY
Sbjct: 7 FDRSLGMLYY 16


>sp|RBL_PYRHO|RIBULOSE bisphosphate carboxylase|Pyrococcus horikoshii (strain ATCC

Query: 3 KSLAKIYY 10
+S+AK++Y
Sbjct: 67 RSMAKVFY 74


>sp|RBL_PYRAB|RIBULOSE bisphosphate carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 3 KSLAKIYY 10
+S+AK++Y
Sbjct: 66 RSMAKVFY 73


>sp|RS3_SACS2|SMALL ribosomal subunit protein uS3|Saccharolobus solfataricus (strain

Query: 1 LDKSLAKIYY 10
+D+ LAK YY
Sbjct: 18 IDEYLAKQYY 27


>sp|NDK_METJA|NUCLEOSIDE diphosphate kinase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LDKSLAKIYY 10
LD+ +A+ YY
Sbjct: 41 LDREMAEKYY 50


>sp|RBL_PYRFU|RIBULOSE bisphosphate carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KSLAKIYY 10
+S+AK++Y
Sbjct: 62 RSMAKVFY 69


>sp|ARCS_METJA|ARCHAEOSINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDKSLAKIY 9
D SLAK+Y
Sbjct: 168 FDDSLAKLY 176




28|SequenceR|145|136|EVAKPLDKSL

>sp|Y2269_METMJ|UPF0210 protein Memar_2269|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 EVAKPLDKS 9
EVAK LDK+
Sbjct: 97 EVAKTLDKA 105


>sp|METK_METAC|S-ADENOSYLMETHIONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EVAKPLDKSL 10
++AKP+D+ L
Sbjct: 342 QIAKPIDQPL 351


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 1 EVAKPLDKSL 10
++AKPL+K L
Sbjct: 746 QMAKPLEKQL 755


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VAKPLDKSL 10
+AKPL+K L
Sbjct: 878 LAKPLEKQL 886


>sp|HUTH_THEVO|PROBABLE histidine ammonia-lyase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EVAKPLDK 8
E KPLDK
Sbjct: 464 EYVKPLDK 471


>sp|Y253_METJA|PUTATIVE hydrogenase maturation protease MJ0253|Methanocaldococcus

Query: 1 EVAKPLDKSL 10
EVAK +DK++
Sbjct: 136 EVAKAVDKAI 145


>sp|CBIJ_METJA|COBALT-PRECORRIN-6A reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VAKPLDKS 9
+ KPLDK+
Sbjct: 48 ITKPLDKN 55


>sp|K6PF_METAC|ADP-SPECIFIC phosphofructokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EVAKPLD 7
E+A+PLD
Sbjct: 68 EIAEPLD 74


>sp|POK_THEKO|PANTOATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EVAKPLDKSL 10
E+A+ LDK L
Sbjct: 238 EIARELDKVL 247


>sp|NREA_ARCFU|DNA repair protein NreA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 KPLDKSL 10
KP+DK+L
Sbjct: 235 KPIDKTL 241


>sp|EF1A_AERPE|ELONGATION factor 1-alpha|Aeropyrum pernix (strain ATCC 700893

Query: 3 AKPLDKSL 10
AKP+DK L
Sbjct: 226 AKPVDKPL 233




29|SequenceR|150|141|IDGLLEVAKP

>sp|ENDA_AERPE|TRNA-SPLICING endonuclease|Aeropyrum pernix (strain ATCC 700893

Query: 3 GLLEVAKP 10
G+LEVAKP
Sbjct: 68 GVLEVAKP 75


>sp|Y1775_ARCFU|PUTATIVE aminohydrolase AF_1775|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IDGLLEVAKP 10
IDG+L +A+P
Sbjct: 128 IDGVLPLARP 137


>sp|AROE_SACI7|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 IDGLLEVAK 9
I+GLLE+A+
Sbjct: 55 INGLLEIAE 63


>sp|AROE_SACI6|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IDGLLEVAK 9
I+GLLE+A+
Sbjct: 55 INGLLEIAE 63


>sp|AROE_SACI4|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.14.25

Query: 1 IDGLLEVAK 9
I+GLLE+A+
Sbjct: 55 INGLLEIAE 63


>sp|AROE_SACI3|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.16.27)

Query: 1 IDGLLEVAK 9
I+GLLE+A+
Sbjct: 55 INGLLEIAE 63


>sp|AROE_SACI2|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain L.S.2.15

Query: 1 IDGLLEVAK 9
I+GLLE+A+
Sbjct: 55 INGLLEIAE 63


>sp|AROE_SACI1|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 IDGLLEVAK 9
I+GLLE+A+
Sbjct: 55 INGLLEIAE 63


>sp|HYPF_METJA|PROBABLE carbamoyltransferase HypF|Methanocaldococcus jannaschii (strain

Query: 2 DGLLEVAK 9
DGL E+AK
Sbjct: 694 DGLFEIAK 701


>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 IDGLLEVAKP 10
I+G ++VAKP
Sbjct: 196 IEGYVKVAKP 205


>sp|CBIA_THEVO|COBYRINATE a,c-diamide synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IDGLLEVAK 9
+DG++E+A+
Sbjct: 216 VDGIIEIAR 224


>sp|SYS2_METTH|TYPE-2 serine--tRNA ligase|Methanothermobacter thermautotrophicus

Query: 2 DGLLEVAKP 10
DGLL + KP
Sbjct: 73 DGLLRLKKP 81


>sp|KHSE_THEVO|HOMOSERINE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 DGLLEVAKP 10
DG+ EVA P
Sbjct: 298 DGVREVANP 306


>sp|AAT_SULAC|ASPARTATE aminotransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IDGLLEVAK 9
ID L+E+AK
Sbjct: 191 IDQLIEIAK 199


>sp|DAPF_METAR|DIAMINOPIMELATE epimerase|Methanocella arvoryzae (strain DSM 22066

Query: 2 DGLLEVAKP 10
DG+L +AKP
Sbjct: 48 DGVLFLAKP 56


>sp|RPO2N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 2 DGLLEVAKP 10
+GLLEV+ P
Sbjct: 214 EGLLEVSFP 222


>sp|RPO2N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 2 DGLLEVAKP 10
+GLLEV+ P
Sbjct: 214 EGLLEVSFP 222


>sp|HELS_NATPD|ATP-DEPENDENT DNA helicase Hel308|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IDGLLEVAKP 10
IDGL + A P
Sbjct: 517 IDGLADAASP 526


>sp|RL30_SULTO|LARGE ribosomal subunit protein uL30|Sulfurisphaera tokodaii (strain

Query: 1 IDGLLEVAKP 10
I G+L++A+P
Sbjct: 44 IRGMLKIAEP 53


>sp|HIS1_PYRFU|ATP phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DGLLEVAK 9
+GL+EVAK
Sbjct: 161 NGLVEVAK 168


>sp|TF2B_METJA|TRANSCRIPTION initiation factor IIB|Methanocaldococcus jannaschii (strain ATCC

Query: 2 DGLLEVAK 9
+G+LE+AK
Sbjct: 137 EGILEIAK 144


>sp|THSA_SULTO|CHAPERONIN subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IDGLLEVAKP 10
+D LEV KP
Sbjct: 248 LDAALEVEKP 257


>sp|THSA_SULAC|CHAPERONIN subunit alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IDGLLEVAKP 10
+D LEV KP
Sbjct: 248 LDAALEVEKP 257


>sp|HIS1_THEKO|ATP phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 DGLLEVAK 9
+GL+EVAK
Sbjct: 159 NGLVEVAK 166


>sp|THSA_SACSH|CHAPERONIN subunit alpha|Saccharolobus shibatae (strain ATCC 51178

Query: 1 IDGLLEVAKP 10
+D LEV KP
Sbjct: 247 LDAALEVEKP 256


>sp|THSA_SACS2|CHAPERONIN subunit alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IDGLLEVAKP 10
+D LEV KP
Sbjct: 247 LDAALEVEKP 256




30|SequenceR|155|146|SCNQVIDGLL

>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SCNQVIDGLL 10
SC+++I G+L
Sbjct: 118 SCDKIIPGML 127


>sp|ILVD_PYRAB|DIHYDROXY-ACID dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 1 SCNQVIDGLL 10
SC+++I G+L
Sbjct: 118 SCDKIIPGML 127


>sp|ILVD_ARCFU|DIHYDROXY-ACID dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SCNQVIDGLL 10
SC+++I G+L
Sbjct: 118 SCDKIIPGML 127


>sp|Y3535_METJA|UNCHARACTERIZED protein MJECL35|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SCNQVIDGLL 10
S +Q+IDG+L
Sbjct: 288 SGDQIIDGIL 297


>sp|ILVD_METS3|DIHYDROXY-ACID dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 SCNQVIDGLL 10
SC++V+ G+L
Sbjct: 118 SCDKVVPGML 127


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 2 CNQVIDG 8
C++V+DG
Sbjct: 546 CHEVVDG 552


>sp|KCY_THESM|CYTIDYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 2 CNQVIDGLL 10
CN VI+G L
Sbjct: 79 CNVVIEGRL 87


>sp|KCY_THEKO|CYTIDYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 CNQVIDGLL 10
CN VI+G L
Sbjct: 79 CNVVIEGRL 87


>sp|KCY_PYRFU|CYTIDYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CNQVIDGLL 10
CN VI+G L
Sbjct: 79 CNVVIEGRL 87


>sp|KCY_PYRAB|CYTIDYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 CNQVIDGLL 10
CN VI+G L
Sbjct: 79 CNVVIEGRL 87


>sp|ARLY_METM7|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C7 /

Query: 2 CNQVIDGLL 10
C Q++DG++
Sbjct: 338 CIQMVDGMI 346


>sp|PUR5_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 NQVIDGLL 10
N++IDG++
Sbjct: 112 NEIIDGIV 119


>sp|ARLY_METMA|ARGININOSUCCINATE lyase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CNQVIDGLL 10
C++++ GLL
Sbjct: 57 CSKILSGLL 65


>sp|ARLY_METBF|ARGININOSUCCINATE lyase|Methanosarcina barkeri (strain Fusaro /

Query: 2 CNQVIDGLL 10
C++++ GLL
Sbjct: 57 CSKILSGLL 65




31|SequenceR|160|151|QSDELSCNQV

>sp|GLNA_METJA|GLUTAMINE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DELSCNQV 10
DEL C++V
Sbjct: 408 DELECDEV 415


>sp|PUR7_METAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 SDELSCN 8
SDE+SC+
Sbjct: 189 SDEISCD 195




32|SequenceR|165|156|REKEIQSDEL

>sp|IXTPA_SACS2|DITP/XTP pyrophosphatase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 EIQSDEL 10
EIQSD+L
Sbjct: 41 EIQSDDL 47




33|SequenceR|170|161|RLIVDREKEI

>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RLIVDREKEI 10
RLIVDRE EI
Sbjct: 203 RLIVDRELEI 212


>sp|PYRC_SACS2|DIHYDROOROTASE solfataricus (strain ATCC 35092

Query: 1 RLIVDREKE 9
L+VDREKE
Sbjct: 220 HLLVDREKE 228


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RLIVDREKEI 10
+ +VDRE+EI
Sbjct: 206 KFLVDREREI 215


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LIVDREKEI 10
++VDRE+EI
Sbjct: 205 IVVDREREI 213


>sp|DNAG_CALMQ|DNA primase DnaG|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 RLIVDREKEI 10
+LI+DR KE+
Sbjct: 117 KLIIDRAKEL 126


>sp|FER7_METJA|UNCHARACTERIZED ferredoxin MJ0722|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LIVDREKEI 10
+IVDREK I
Sbjct: 5 IIVDREKCI 13


>sp|Y1233_METJA|UNCHARACTERIZED protein MJ1233|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RLIVDREKEI 10
++++DREK+I
Sbjct: 43 KILIDREKKI 52


>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 LIVDREKEI 10
++V+REKEI
Sbjct: 213 ILVEREKEI 221


>sp|DNAG_METPE|DNA primase DnaG|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 RLIVDREKEI 10
R IVDR KE+
Sbjct: 116 RKIVDRAKEL 125


>sp|RS9_PICTO|SMALL ribosomal subunit protein uS9|Picrophilus torridus (strain ATCC

Query: 1 RLIVDREKEI 10
R++ DR KEI
Sbjct: 51 RILGDRSKEI 60




34|SequenceR|175|166|NEQMERLIVD

>sp|RRP41_ARCFU|EXOSOME complex component Rrp41|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NEQMERLIVD 10
NE+ E+LIVD
Sbjct: 5 NEKPEKLIVD 14


>sp|RLMN_NITMS|RIBOSOMAL RNA large subunit methyltransferase|Nitrosopumilus maritimus

Query: 2 EQMERLIVD 10
E+ME+L++D
Sbjct: 10 EEMEKLVID 18


>sp|PFDA_THEON|PREFOLDIN subunit alpha|Thermococcus onnurineus (strain NA1)

Query: 1 NEQMERL 7
NEQ+ERL
Sbjct: 5 NEQLERL 11


>sp|FUMC_SACS2|FUMARATE hydratase class II|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EQMERLIVD 10
E+M RL++D
Sbjct: 354 EKMSRLVID 362


>sp|LYSJ_PYRFU|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 EQMERLIV 9
EQ+E+L+V
Sbjct: 51 EQLEKLVV 58


>sp|Y609_ARCFU|UNCHARACTERIZED protein AF_0609|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 MERLIVD 10
MER++VD
Sbjct: 1 MERMVVD 7




35|SequenceR|180|171|RMSADNEQME

***** No hits found ******


36|SequenceR|185|176|NFVVDRMSAD

>sp|HTAXP_HALS3|HEAT repeat-containing taxis protein OE_2401F|Halobacterium salinarum

Query: 3 VVDRMSA 9
+VDRMSA
Sbjct: 262 IVDRMSA 268


>sp|GFCR_METBU|TRANSCRIPTIONAL regulator GfcR|Methanococcoides burtonii (strain DSM 6242

Query: 3 VVDRMSAD 10
+VD+M+AD
Sbjct: 179 IVDKMNAD 186




37|SequenceR|190|181|TAHLYNFVVD

>sp|PRIS_STAMF|DNA primase small subunit PriS|Staphylothermus marinus (strain ATCC

Query: 3 HLYNFVVD 10
HLYNF+++
Sbjct: 57 HLYNFILN 64


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TAHLYNFVVD 10
T LYNFVV+
Sbjct: 738 TRALYNFVVE 747


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TAHLYNFVVD 10
T LYNFVV+
Sbjct: 738 TRALYNFVVE 747


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 TAHLYNFVVD 10
T LYNFVV+
Sbjct: 738 TRALYNFVVE 747


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 TAHLYNFVVD 10
T +YNFVV+
Sbjct: 738 TRGIYNFVVE 747


>sp|SYT_METS3|THREONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 HLYNFVVD 10
++YN VVD
Sbjct: 233 YVYNLVVD 240


>sp|RFCL_PYRHO|REPLICATION factor C large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 AHLYNFVV 9
AH YNF V
Sbjct: 64 AHEYNFEV 71




38|SequenceR|195|186|TGQFATAHLY

>sp|ARGC_METBF|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GQFATAHLY 10
G F TAHL+
Sbjct: 234 GIFTTAHLF 242


>sp|MEND_HALSA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 TGQFATAH 8
TGQF T H
Sbjct: 512 TGQFKTPH 519


>sp|MEND_HALS3|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 TGQFATAH 8
TGQF T H
Sbjct: 512 TGQFKTPH 519


>sp|TYW2_METJA|TRNA(PHE) (4-demethylwyosine(37)-C(7))

Query: 1 TGQFATAHL 9
TG+F T H+
Sbjct: 43 TGEFRTPHV 51


>sp|RL3_THEVO|LARGE ribosomal subunit protein uL3|Thermoplasma volcanium (strain ATCC

Query: 3 QFATAHL 9
++ATAHL
Sbjct: 170 EYATAHL 176


>sp|COX1_HALSA|CYTOCHROME c oxidase polypeptide 1|Halobacterium salinarum (strain ATCC 700922

Query: 3 QFATAH 8
QFATAH
Sbjct: 499 QFATAH 504


>sp|SYW_METTH|TRYPTOPHAN--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 TGQFATAHLY 10
TG + AH+Y
Sbjct: 173 TGSTSMAHMY 182


>sp|G3P_HALVA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Haloarcula vallismortis (Halobacterium vallismortis)

Query: 2 GQFATAHLY 10
GQ T H Y
Sbjct: 177 GQLTTVHAY 185


>sp|LYSY_PYRAE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 GQFATAHLY 10
G FAT H++
Sbjct: 241 GIFATGHVF 249


>sp|LYSY_PYRNV|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 GQFATAHLY 10
G F T H+Y
Sbjct: 242 GIFTTGHVY 250


>sp|LYSY_PYRIL|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 GQFATAHLY 10
G F T H+Y
Sbjct: 242 GIFTTGHVY 250


>sp|DTDA_HALLT|D-AMINOACYL-TRNA deacylase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 TGQFATAHL 9
TG+ TAH+
Sbjct: 101 TGELLTAHV 109




39|SequenceR|200|191|AQALPTGQFA

>sp|HISX_METJA|HISTIDINOL dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QALPTGQFA 10
LPT QFA
Sbjct: 368 HVLPTSQFA 376




40|SequenceR|205|196|SPGEVAQALP

>sp|GLYA_KORCO|SERINE hydroxymethyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 SPGEVAQALP 10
+PG+VA ALP
Sbjct: 106 NPGDVAMALP 115


>sp|Y1268_SULTO|PUTATIVE HTH-type transcriptional regulatory protein|Sulfurisphaera tokodaii

Query: 1 SPGEVAQAL 9
S GEVAQAL
Sbjct: 133 SLGEVAQAL 141


>sp|Y1621_ARCFU|UPF0324 membrane protein AF_1621|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PGEVAQAL 9
PGEV QAL
Sbjct: 266 PGEVVQAL 273


>sp|SYFB_METMP|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 SPGEVAQAL 9
+PGE+ QAL
Sbjct: 297 NPGEIIQAL 305


>sp|RL30_THEAC|LARGE ribosomal subunit protein uL30|Thermoplasma acidophilum (strain

Query: 2 PGEVAQALP 10
P E+A A+P
Sbjct: 106 PSEIADAVP 114


>sp|RL10_STAMF|LARGE ribosomal subunit protein uL10|Staphylothermus marinus (strain ATCC

Query: 1 SPGEVAQ 7
PGE+AQ
Sbjct: 115 KPGEIAQ 121


>sp|DTDA_HALWD|D-AMINOACYL-TRNA deacylase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 PGEVAQALP 10
PG AQA P
Sbjct: 100 PGSFAQACP 108


>sp|MUTL_METTP|DNA mismatch repair protein MutL|Methanothrix thermoacetophila (strain

Query: 1 SPGEVA 6
SPGEVA
Sbjct: 430 SPGEVA 435




41|SequenceR|210|201|KRVNESPGEV

>sp|RPO10_HALWD|DNA-DIRECTED RNA polymerase subunit Rpo10|Haloquadratum walsbyi (strain DSM

Query: 4 NESPGEV 10
NE PGEV
Sbjct: 29 NEDPGEV 35


>sp|RIFK_HALSA|RIBOFLAVIN kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 KRVNESPGEV 10
+R+ E PGE+
Sbjct: 91 RRIFEDPGEL 100


>sp|PELO_IGNH4|PROTEIN pelota homolog|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 VNESPGEV 10
VNES GEV
Sbjct: 6 VNESKGEV 13


>sp|SMC_METJA|CHROMOSOME partition protein Smc|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KRVNESPGEV 10
KR+NE GE+
Sbjct: 800 KRMNEIEGEL 809


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KRVNESPG 8
KRV++ PG
Sbjct: 15 KRVHDQPG 22


>sp|RS7_META3|SMALL ribosomal subunit protein uS7|Methanococcus aeolicus (strain ATCC

Query: 1 KRVNESPGEV 10
KR NE+P +V
Sbjct: 85 KRTNENPVKV 94


>sp|TRUB_KORCO|PROBABLE tRNA pseudouridine synthase B|Korarchaeum cryptofilum (strain

Query: 1 KRVNESPGEV 10
KR+ E PG+V
Sbjct: 55 KRILEYPGKV 64




42|SequenceR|215|206|DARSLKRVNE

>sp|TRPF_METTH|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DARSLKRV 8
DAR +KRV
Sbjct: 97 DARGIKRV 104


>sp|TOP6A_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 3 RSLKRVNE 10
R +KRVNE
Sbjct: 220 RFIKRVNE 227


>sp|RPO10_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo10|Thermoplasma acidophilum (strain

Query: 2 ARSLKRVNE 10
R +KRVNE
Sbjct: 19 GRYIKRVNE 27


>sp|PYRC_THEAC|DIHYDROOROTASE acidophilum (strain ATCC 25905

Query: 1 DARSLKRVNE 10
D S+KR+N+
Sbjct: 354 DFTSMKRIND 363


>sp|IF2A_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 4 SLKRVNE 10
SLKRVN+
Sbjct: 79 SLKRVNQ 85




43|SequenceR|220|211|LYETLDARSL

>sp|PYRG_HALWD|CTP synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 TLDARSL 10
TLDARSL
Sbjct: 539 TLDARSL 545


>sp|Y2264_ARCFU|PUTATIVE esterase AF_2264|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LYETLDARSL 10
L+E LDAR L
Sbjct: 32 LFELLDARIL 41




44|SequenceR|225|216|KYHTSLYETL

>sp|GATE_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain DSM

Query: 2 YHTSLYETL 10
YH L+ETL
Sbjct: 480 YHVDLFETL 488


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KYHTSLYETL 10
+YH YET
Sbjct: 74 RYHEHFYETF 83


>sp|PSB_HALLT|PROTEASOME subunit beta|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 KYHTSLYET 9
K TSLYET
Sbjct: 109 KAETSLYET 117


>sp|GATE_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C7 /

Query: 2 YHTSLYETL 10
YH L+E+L
Sbjct: 480 YHVDLFESL 488


>sp|GATE_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C5 /

Query: 2 YHTSLYETL 10
YH L+E+L
Sbjct: 480 YHVDLFESL 488


>sp|GATE_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C6 /

Query: 2 YHTSLYETL 10
YH L+E+L
Sbjct: 480 YHVDLFESL 488


>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 3 HTSLYETL 10
H SLY TL
Sbjct: 303 HNSLYRTL 310


>sp|RPO7_METJA|DNA-DIRECTED RNA polymerase subunit Rpo7|Methanocaldococcus jannaschii (strain

Query: 2 YHTSLYETL 10
YH ++ETL
Sbjct: 67 YHPVVFETL 75




45|SequenceR|230|221|VMRPAKYHTS

>sp|COFC_METAR|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 1 VMRPAKYH 8
+ RP KYH
Sbjct: 124 IRRPDKYH 131


>sp|LEU1_SULTO|2-ISOPROPYLMALATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VMRPAKYH 8
VM P K+H
Sbjct: 178 VMHPFKFH 185


>sp|RSMA_METBU|PROBABLE ribosomal RNA small subunit|Methanococcoides burtonii (strain DSM

Query: 1 VMRPAKYHT 9
V RP+ +HT
Sbjct: 187 VPRPSSFHT 195


>sp|COFC_METB6|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanoregula boonei (strain DSM 21154

Query: 1 VMRPAKYH 8
V PAK+H
Sbjct: 126 VREPAKFH 133


>sp|TRPB_THEON|TRYPTOPHAN synthase beta chain|Thermococcus onnurineus (strain NA1)

Query: 1 VMRPAKYHTS 10
++RP YH +
Sbjct: 352 IVRPVAYHQT 361




46|SequenceR|235|226|GAAALVMRPA

>sp|RS5_METS5|SMALL ribosomal subunit protein uS5|Metallosphaera sedula (strain ATCC

Query: 1 GAAALVMRPA 10
G+A +V+RPA
Sbjct: 143 GSAEVVLRPA 152


>sp|Y2317_HALSA|PUTATIVE ABC transporter ATP-binding protein|Halobacterium salinarum (strain

Query: 2 AAALVMRP 9
AAAL MRP
Sbjct: 145 AAALAMRP 152




47|SequenceR|240|231|QHEVGGAAAL

>sp|MTD_METAC|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina

Query: 2 HEVGGAAAL 10
HE+ GAAA+
Sbjct: 234 HEIMGAAAI 242


>sp|RFCL_ARCFU|REPLICATION factor C large subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QHEVGGAAAL 10
+ +VGG AAL
Sbjct: 119 KEDVGGEAAL 128


>sp|PELO_METAC|PROTEIN pelota homolog|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 HEVGGAAAL 10
H++GG AAL
Sbjct: 335 HKLGGVAAL 343


>sp|PELO_METBF|PROTEIN pelota homolog|Methanosarcina barkeri (strain Fusaro /

Query: 2 HEVGGAAAL 10
H++GG AAL
Sbjct: 335 HKLGGIAAL 343


>sp|PELO_METMA|PROTEIN pelota homolog|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HEVGGAAAL 10
H++GG AAL
Sbjct: 335 HKLGGIAAL 343




48|SequenceR|245|236|LDLLQQHEVG

>sp|LHRC_METJA|ATP-DEPENDENT helicase Lhr-Core|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDLLQQHEVG 10
LD+L QH VG
Sbjct: 415 LDVLAQHLVG 424


>sp|DNAG_THEAC|DNA primase DnaG|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LDLLQQHEV 9
LDLL HEV
Sbjct: 350 LDLLNPHEV 358


>sp|THIC_METJA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDLLQQHEV 9
LD+L++H+V
Sbjct: 211 LDILKEHDV 219


>sp|IF2P_METBU|PROBABLE translation initiation factor IF-2|Methanococcoides burtonii

Query: 1 LDLLQQHE 8
L++LQQH+
Sbjct: 117 LNILQQHK 124


>sp|IF6_METST|TRANSLATION initiation factor 6|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LDLLQQHEV 9
LD+L++H++
Sbjct: 79 LDVLREHDI 87


>sp|Y534_METFV|UNCHARACTERIZED protein Mfer_0534|Methanothermus fervidus (strain ATCC 43054

Query: 1 LDLLQQHEV 9
+D+L QH+V
Sbjct: 509 VDILVQHDV 517


>sp|LHRC2_THEBM|ATP-DEPENDENT helicase Lhr-Core protein 2|Thermococcus barophilus (strain DSM

Query: 1 LDLLQQHEVG 10
LD+L QH +G
Sbjct: 423 LDVLVQHLLG 432


>sp|RL29_METAR|LARGE ribosomal subunit protein uL29|Methanocella arvoryzae (strain DSM

Query: 2 DLLQQHEV 9
DLL+QH +
Sbjct: 27 DLLKQHAI 34


>sp|DNAG_THEVO|DNA primase DnaG|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LDLLQQHEV 9
LDLL H+V
Sbjct: 346 LDLLNPHDV 354


>sp|Y746_METJA|UNCHARACTERIZED protein MJ0746|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDLLQQHEVG 10
LDL+ +H++G
Sbjct: 3 LDLINEHKIG 12




49|SequenceR|250|241|LHKQALDLLQ

>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LHKQALDLLQ 10
L QA+D+LQ
Sbjct: 639 LRSQAMDILQ 648


>sp|VHUG_METVO|F420-NON-REDUCING hydrogenase vhu subunit G|Methanococcus voltae

Query: 1 LHKQALDLL 9
LH+Q LD+L
Sbjct: 25 LHEQLLDVL 33


>sp|SYS2_METTP|TYPE-2 serine--tRNA ligase|Methanothrix thermoacetophila (strain DSM

Query: 1 LHKQALDLLQ 10
KQA+DLL+
Sbjct: 26 FEKQAVDLLK 35


>sp|PCP_THEON|PYRROLIDONE-CARBOXYLATE peptidase|Thermococcus onnurineus (strain NA1)

Query: 1 LHKQALD 7
+H+QALD
Sbjct: 169 IHEQALD 175


>sp|NADK_SULTO|NAD kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 KQALDLLQ 10
K+AL+LLQ
Sbjct: 78 KEALELLQ 85


>sp|SIHH_METAC|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LHKQALDLL 9
LHK+ DLL
Sbjct: 129 LHKERTDLL 137


>sp|CARA_METMA|CARBAMOYL phosphate synthase small chain|Methanosarcina mazei (strain ATCC

Query: 1 LHKQALDL 8
LHK+ +DL
Sbjct: 198 LHKRGIDL 205


>sp|CARA_METAC|CARBAMOYL phosphate synthase small chain|Methanosarcina acetivorans (strain

Query: 1 LHKQALDL 8
LHK+ +DL
Sbjct: 198 LHKRGIDL 205


>sp|CDC6O_HALMA|ORC1-TYPE DNA replication protein 15|Haloarcula marismortui (strain ATCC

Query: 3 KQALDLLQ 10
+QALDLL+
Sbjct: 250 RQALDLLR 257


>sp|VHCG_METVO|F420-NON-REDUCING hydrogenase vhc subunit G|Methanococcus voltae

Query: 1 LHKQALDLLQ 10
LH+ LD+L+
Sbjct: 22 LHEDLLDILE 31




50|SequenceR|255|246|WPIGGLHKQA

>sp|NADE_METMA|NH(3)-DEPENDENT NAD(+) synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PIGGLHK 8
PIGGL+K
Sbjct: 158 PIGGLYK 164


>sp|NADE_METTH|NH(3)-DEPENDENT NAD(+) synthetase|Methanothermobacter thermautotrophicus (strain

Query: 2 PIGGLHK 8
PIGGL+K
Sbjct: 160 PIGGLYK 166


>sp|COFH_META3|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus aeolicus (strain ATCC

Query: 2 PIGGLHKQA 10
P+GG+H A
Sbjct: 131 PLGGIHIHA 139


>sp|Y1402_METJA|UNCHARACTERIZED protein MJ1402|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WPIGGLHK 8
W +G LHK
Sbjct: 285 WDVGTLHK 292


>sp|DNLI_NANEQ|DNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 GGLHKQ 9
GG+HKQ
Sbjct: 562 GGIHKQ 567


>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 IGGLHKQA 10
I GL+KQA
Sbjct: 866 ISGLYKQA 873


>sp|Y1535_METJA|UNCHARACTERIZED protein MJ1535|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WPIGGL 6
W IGGL
Sbjct: 247 WKIGGL 252


>sp|TGT_ARCFU|PUTATIVE queuine tRNA-ribosyltransferase|Archaeoglobus fulgidus (strain

Query: 3 IGGLHK 8
+GGLHK
Sbjct: 75 LGGLHK 80




51|SequenceR|260|251|DEAYTWPIGG

>sp|RL18_KORCO|LARGE ribosomal subunit protein uL18|Korarchaeum cryptofilum (strain

Query: 2 EAYTWPIGG 10
E Y WP GG
Sbjct: 68 EKYGWPYGG 76


>sp|RL22_HYPBU|LARGE ribosomal subunit protein uL22|Hyperthermus butylicus (strain DSM

Query: 4 YTWPIG 9
Y WPIG
Sbjct: 78 YKWPIG 83


>sp|SODM2_HALME|SUPEROXIDE dismutase [Mn] 2|Haloferax mediterranei (Halobacterium

Query: 2 EAYTWPIGG 10
EA +WP GG
Sbjct: 82 EAASWPAGG 90


>sp|HIS8_HALWD|HISTIDINOL-PHOSPHATE aminotransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 EAYTWPIGG 10
+A TWP GG
Sbjct: 290 DARTWPSGG 298


>sp|DPO4_METAC|DNA polymerase IV|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EAYTWPI 8
EA+ WP+
Sbjct: 182 EAFLWPL 188


>sp|DPO41_METMA|DNA polymerase IV 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EAYTWPI 8
EA+ WP+
Sbjct: 181 EAFLWPL 187


>sp|ATGT_THEKO|TRNA-GUANINE(15) transglycosylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DEAYTWPI 8
+EA WPI
Sbjct: 369 EEALRWPI 376


>sp|ATGT_NANEQ|TRNA-GUANINE(15) transglycosylase|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 YTWPIG 9
Y WP G
Sbjct: 387 YAWPFG 392


>sp|TFS1_SACS2|TRANSCRIPTION factor S1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DEAYTW 6
DEAY W
Sbjct: 81 DEAYFW 86


>sp|TFS_SULAC|TRANSCRIPTION factor S|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DEAYTW 6
DEAY W
Sbjct: 78 DEAYFW 83


>sp|ARGDC_METS5|ARGININE decarboxylase proenzyme|Metallosphaera sedula (strain ATCC 51363

Query: 2 EAYTWPIGG 10
EA +W GG
Sbjct: 54 EAKSWSFGG 62


>sp|GLCD2_VULM7|GLUCOSE 1-dehydrogenase 2|Vulcanisaeta moutnovskia (strain 768-28)

Query: 2 EAYTW 6
EAYTW
Sbjct: 330 EAYTW 334


>sp|TRM56_IGNH4|TRNA (cytidine(56)-2'-O)-methyltransferase|Ignicoccus hospitalis (strain

Query: 2 EAYTWPIGG 10
E Y P+GG
Sbjct: 147 ELYRQPVGG 155


>sp|NIFE_METBA|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanosarcina

Query: 3 AYTWPIGG 10
YTW I G
Sbjct: 73 GYTWDIRG 80


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 3 AYTWPIG 9
AY W +G
Sbjct: 993 AYVWKVG 999


>sp|FLA1_SACSH|FLAGELLIN FlaB2|Saccharolobus shibatae (strain ATCC 51178

Query: 3 AYTWPIGG 10
A+T+P+ G
Sbjct: 234 AFTYPVAG 241


>sp|SYE_METAR|GLUTAMATE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 EAYTW 6
EAYTW
Sbjct: 157 EAYTW 161




52|SequenceR|265|256|LTPVADEAYT

>sp|COXX_SULTO|PROTOHEME IX farnesyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LTPVADEAY 9
L P ADEA+
Sbjct: 270 LNPTADEAW 278


>sp|Y534_THEGJ|UPF0284 protein TGAM_0534|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LTPVADEAY 9
LTPVAD Y
Sbjct: 32 LTPVADAEY 40


>sp|CETZ6_HALVD|TUBULIN-LIKE protein CetZ6|Haloferax volcanii (strain ATCC 29605

Query: 3 PVADEAY 9
P++DEAY
Sbjct: 179 PISDEAY 185


>sp|YA00_PYRHO|PUTATIVE transport protein PH1000|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LTPVADEAY 9
LTPV +AY
Sbjct: 106 LTPVIGQAY 114


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 LTPVADEAYT 10
L ++DEAYT
Sbjct: 449 LKRISDEAYT 458


>sp|Y038_PYRAB|UPF0284 protein PYRAB00380|Pyrococcus abyssi (strain GE5 /

Query: 1 LTPVADEAY 9
+TPVAD Y
Sbjct: 32 ITPVADAEY 40


>sp|Y034_PYRHO|UPF0284 protein PH0034|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LTPVADEAY 9
+TPVAD Y
Sbjct: 35 ITPVADAEY 43


>sp|HIS8_METTH|HISTIDINOL-PHOSPHATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 4 VADEAYT 10
V DEAYT
Sbjct: 198 VVDEAYT 204




53|SequenceR|270|261|FRCPTLTPVA

>sp|DEOC_AERPE|DEOXYRIBOSE-PHOSPHATE aldolase|Aeropyrum pernix (strain ATCC 700893

Query: 1 FRCPTLTPV 9
FRC LTPV
Sbjct: 51 FRCAVLTPV 59


>sp|DEOC_METTH|DEOXYRIBOSE-PHOSPHATE aldolase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 FRCPTLTP 8
FRC +TP
Sbjct: 42 FRCAVVTP 49


>sp|GATE_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina mazei (strain ATCC

Query: 2 RCPTL 6
RCPTL
Sbjct: 30 RCPTL 34


>sp|GATE_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina barkeri (strain Fusaro

Query: 2 RCPTL 6
RCPTL
Sbjct: 30 RCPTL 34


>sp|GATE_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina acetivorans (strain

Query: 2 RCPTL 6
RCPTL
Sbjct: 30 RCPTL 34


>sp|GATE_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Archaeoglobus fulgidus (strain ATCC

Query: 3 CPTLT 7
CPTLT
Sbjct: 29 CPTLT 33


>sp|SYTE_AERPE|THREONINE--TRNA ligase editing subunit|Aeropyrum pernix (strain ATCC 700893

Query: 4 PTLTPV 9
PTLTPV
Sbjct: 312 PTLTPV 317


>sp|TRPB2_METTH|TRYPTOPHAN synthase beta chain 2|Methanothermobacter thermautotrophicus

Query: 3 CPTLT 7
CPTLT
Sbjct: 295 CPTLT 299


>sp|TRPB2_ARCFU|TRYPTOPHAN synthase beta chain 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CPTLT 7
CPTLT
Sbjct: 298 CPTLT 302




54|SequenceR|275|266|IESGTFRCPT

>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 ESGTFRCP 9
E GT++CP
Sbjct: 455 EDGTYKCP 462


>sp|Y1620_METJA|UNCHARACTERIZED protein MJ1620|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ESGTFRCP 9
E+GT +CP
Sbjct: 202 ENGTLKCP 209


>sp|AROC_METJA|CHORISMATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IESGTFRCPT 10
IES RCP+
Sbjct: 191 IESNPLRCPS 200


>sp|RF1_THEAC|PEPTIDE chain release factor subunit|Thermoplasma acidophilum (strain ATCC

Query: 5 TFRCPT 10
T+RCPT
Sbjct: 330 TYRCPT 335


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 4 GTFRCP 9
GT RCP
Sbjct: 1151 GTLRCP 1156


>sp|TDXH_AERPE|PEROXIREDOXIN pernix (strain ATCC 700893

Query: 1 IESGTFRC 8
+ESG +RC
Sbjct: 200 MESGQYRC 207


>sp|GLMM_PYRHO|PROBABLE phosphoglucosamine mutase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IESGTFR 7
IESG FR
Sbjct: 127 IESGNFR 133


>sp|Y1111_PYRAE|UNCHARACTERIZED protein PAE1111|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IESGTFRCP 9
I +G F CP
Sbjct: 123 ISTGIFGCP 131


>sp|Y858_METMJ|UPF0212 protein Memar_0858|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 IESGTFRCP 9
IE+G CP
Sbjct: 44 IEAGMIACP 52


>sp|HTR6_HALS3|TRANSDUCER protein Htr6|Halobacterium salinarum (strain ATCC 29341

Query: 1 IESGTF 6
IESGTF
Sbjct: 331 IESGTF 336


>sp|RUBR2_METJA|PROBABLE Rubredoxin-2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 TFRCP 9
TFRCP
Sbjct: 38 TFRCP 42


>sp|RS21_HALVD|SMALL ribosomal subunit protein aS21|Haloferax volcanii (strain ATCC

Query: 1 IESGTFRCP 9
+ + TF+CP
Sbjct: 22 MSAATFKCP 30


>sp|CREN7_IGNH4|CHROMATIN protein Cren7|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 GTFRCP 9
G FRCP
Sbjct: 31 GLFRCP 36




55|SequenceR|280|271|DDRHRIESGT

>sp|T1R2_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 DDRHRIESG 9
D+ HR ESG
Sbjct: 403 DEAHRTESG 411


>sp|MCRG_METBF|METHYL-COENZYME M reductase subunit gamma|Methanosarcina barkeri (strain Fusaro /

Query: 2 DRHRIESGT 10
DR R+E+GT
Sbjct: 174 DRRRLENGT 182


>sp|Y51B_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ0514.2|Methanocaldococcus jannaschii

Query: 2 DRHRIES 8
D+HR+E+
Sbjct: 105 DKHRVET 111


>sp|CIMA_METTH|PUTATIVE (R)-citramalate synthase CimA|Methanothermobacter

Query: 1 DDRHRIESGT 10
DDR +E+GT
Sbjct: 400 DDREVLEAGT 409


>sp|G1PDH_METBU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcoides burtonii (strain DSM

Query: 3 RHRIESGT 10
+H IESGT
Sbjct: 88 KHAIESGT 95


>sp|RTCB_NANEQ|TRNA-SPLICING ligase RtcB|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 DDRHRIES 8
+DR+RIES
Sbjct: 163 EDRNRIES 170


>sp|HIS7_CENSY|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Cenarchaeum symbiosum (strain A)

Query: 1 DDRHRIESG 9
+D HR+ES
Sbjct: 157 NDHHRVESA 165


>sp|TRUB_KORCO|PROBABLE tRNA pseudouridine synthase B|Korarchaeum cryptofilum (strain OPF8)

Query: 3 RHRIESGT 10
R R+ESGT
Sbjct: 160 RVRVESGT 167


>sp|AGL10_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl10|Haloferax volcanii

Query: 1 DDRHRIESG 9
DD H I+SG
Sbjct: 64 DDIHYIDSG 72


>sp|PELO_PYRAB|PROTEIN pelota homolog|Pyrococcus abyssi (strain GE5 /

Query: 1 DDRHRIE 7
DDR RIE
Sbjct: 309 DDRERIE 315




56|SequenceR|285|276|AFPLADDRHR

>sp|FEN_METAR|FLAP endonuclease 1|Methanocella arvoryzae (strain DSM 22066

Query: 3 PLADDR 8
PLADDR
Sbjct: 46 PLADDR 51


>sp|PSB_HALWD|PROTEASOME subunit beta|Haloquadratum walsbyi (strain DSM 16790

Query: 2 FPLADDR 8
FP ADDR
Sbjct: 31 FPNADDR 37


>sp|Y1433_METJA|UNCHARACTERIZED protein MJ1433|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FPLADDRHR 10
F LAD+ HR
Sbjct: 173 FHLADELHR 181


>sp|METXA_METAC|HOMOSERINE O-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 AFPLADDRHR 10
A P+ D HR
Sbjct: 513 ALPVIDSEHR 522


>sp|HUTU_HALSA|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 2 FPLADDRHR 10
FP DD HR
Sbjct: 404 FPEKDDLHR 412


>sp|HUTU_HALS3|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 29341

Query: 2 FPLADDRHR 10
FP DD HR
Sbjct: 404 FPEKDDLHR 412


>sp|RS4_NATPD|SMALL ribosomal subunit protein uS4|Natronomonas pharaonis (strain ATCC

Query: 3 PLADDRH 9
PLADD H
Sbjct: 161 PLADDLH 167


>sp|MBD_THEVO|MEVALONATE 3,5-bisphosphate decarboxylase|Thermoplasma volcanium (strain ATCC

Query: 1 AFPLADDRH 9
AF +ADD H
Sbjct: 207 AFRVADDPH 215




57|SequenceR|290|281|AIAVHAFPLA

>sp|FAU1_AERPE|PROBABLE ribonuclease FAU-1|Aeropyrum pernix (strain ATCC 700893

Query: 2 IAVHAFP 8
I +HAFP
Sbjct: 60 IVIHAFP 66


>sp|HDRB2_METJA|COB--COM heterodisulfide reductase subunit B|Methanocaldococcus jannaschii

Query: 1 AIAVHAFPL 9
A++VHA P+
Sbjct: 277 AVSVHAIPV 285


>sp|WTPC_PYRHO|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus horikoshii (strain ATCC

Query: 1 AIAVHAFP 8
A A+H FP
Sbjct: 338 ASAIHVFP 345


>sp|Y1428_PYRHO|UPF0091 protein PH1428|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AIAVHAFP 8
+IA+H FP
Sbjct: 21 SIALHRFP 28




58|SequenceR|295|286|GPGEVAIAVH

>sp|GLCDH_METPS|GLUCOSE 1-dehydrogenase|Methanocella paludicola (strain DSM 17711

Query: 1 GPGEVAIAVH 10
GPGEV + VH
Sbjct: 25 GPGEVLVRVH 34


>sp|AATE3_METHJ|A-TYPE ATP synthase subunit E|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GPGEVAIAVH 10
GP ++A+ VH
Sbjct: 118 GPSDIAVKVH 127


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 PGEVAIAVH 10
P VA+AVH
Sbjct: 229 PANVAVAVH 237


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PGEVAIAVH 10
P VA+AVH
Sbjct: 229 PANVAVAVH 237


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PGEVAIAVH 10
P VA+AVH
Sbjct: 229 PANVAVAVH 237


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PGEVAIAVH 10
P VA+AVH
Sbjct: 229 PANVAVAVH 237


>sp|GATB_SACS2|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 1 GPGEVAIA 8
GPG +AIA
Sbjct: 96 GPGSMAIA 103


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PGEVAIAVH 10
P VAIAVH
Sbjct: 214 PACVAIAVH 222


>sp|GATB_SULAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfolobus acidocaldarius (strain ATCC

Query: 1 GPGEVAIA 8
GPG +AI+
Sbjct: 96 GPGSIAIS 103


>sp|GATB_SULTO|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfurisphaera tokodaii (strain DSM

Query: 1 GPGEVAIA 8
GPG +AI+
Sbjct: 96 GPGSIAIS 103


>sp|RTCB_METTH|TRNA-SPLICING ligase RtcB|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 PGEVAIAVH 10
PG+VA+ +H
Sbjct: 228 PGKVAVMIH 236


>sp|HEM3_METBU|PROBABLE porphobilinogen deaminase|Methanococcoides burtonii (strain DSM

Query: 3 GEVAIAVH 10
GEV IAVH
Sbjct: 66 GEVDIAVH 73


>sp|GATD_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermoplasma volcanium (strain ATCC

Query: 3 GEVAIAVH 10
GEV IA+H
Sbjct: 205 GEVGIAMH 212


>sp|HEM3_THEVO|PROBABLE porphobilinogen deaminase|Thermoplasma volcanium (strain ATCC

Query: 3 GEVAIAVH 10
GE+ +AVH
Sbjct: 68 GEIDVAVH 75


>sp|HEM3_METAC|PROBABLE porphobilinogen deaminase|Methanosarcina acetivorans (strain ATCC

Query: 3 GEVAIAVH 10
GE+ IAVH
Sbjct: 67 GEIDIAVH 74


>sp|IF2P_THEAC|PROBABLE translation initiation factor IF-2|Thermoplasma acidophilum (strain

Query: 1 GPGEVAIAV 9
P EVA+A+
Sbjct: 523 APAEVAVAI 531


>sp|HIS1_METBF|ATP phosphoribosyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PGEVAIAVH 10
PGE +AVH
Sbjct: 248 PGESILAVH 256


>sp|Y803_PYRIL|UPF0173 metal-dependent hydrolase Pisl_0803|Pyrobaculum islandicum (strain

Query: 1 GPGEVAIAVH 10
GP E AIAV
Sbjct: 168 GPREAAIAVQ 177


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 PGEVAIAVH 10
P VA+AVH
Sbjct: 237 PACVAVAVH 245


>sp|HEM3_METMA|PROBABLE porphobilinogen deaminase|Methanosarcina mazei (strain ATCC

Query: 3 GEVAIAVH 10
GE+ IAVH
Sbjct: 67 GEIDIAVH 74


>sp|Y1074_PYRCJ|UPF0173 metal-dependent hydrolase Pcal_1074|Pyrobaculum calidifontis

Query: 1 GPGEVAIAVH 10
GP E AIAV
Sbjct: 168 GPREAAIAVQ 177


>sp|SYFB_METMJ|PHENYLALANINE--TRNA ligase beta subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GPGEVAIAVH 10
G G+VAI VH
Sbjct: 129 GRGKVAIGVH 138


>sp|IF2P_THEVO|PROBABLE translation initiation factor IF-2|Thermoplasma volcanium (strain

Query: 1 GPGEVAIAV 9
P EVA+A+
Sbjct: 523 APAEVAVAI 531


>sp|Y810_PYRAR|UPF0173 metal-dependent hydrolase Pars_0810|Pyrobaculum arsenaticum (strain

Query: 1 GPGEVAIAVH 10
GP E AIAV
Sbjct: 168 GPREAAIAVQ 177


>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 1 GPGEVAIAVH 10
GPG+VA+ V
Sbjct: 269 GPGKVAVNVD 278


>sp|Y1294_PYRFU|UPF0200 protein PF1294|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GPGEVAI 7
GPG VAI
Sbjct: 62 GPGAVAI 68


>sp|AROA_METMJ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanoculleus marisnigri (strain ATCC

Query: 2 PGEVAIA 8
PGE+A+A
Sbjct: 67 PGEIAVA 73




59|SequenceR|300|291|DPSAWGPGEV

>sp|SYC_THEAC|CYSTEINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 SAWGPG 8
S WGPG
Sbjct: 194 SPWGPG 199


>sp|DGGGP_METBF|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PSAWGPGE 9
PS++ PGE
Sbjct: 40 PSSYSPGE 47


>sp|SYR_METAC|ARGININE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DPSAWGPGE 9
D +AW P E
Sbjct: 463 DEAAWDPAE 471


>sp|MDH_SULTO|MALATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 SAWGPGEV 10
+ WGPG +
Sbjct: 219 TTWGPGTI 226


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 1 DPSAWGPGEV 10
DP+ GPG++
Sbjct: 599 DPAHRGPGQI 608


>sp|SYC_THEVO|CYSTEINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PSAWGPG 8
PS WG G
Sbjct: 193 PSPWGEG 199


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 3 SAWGPG 8
S WGPG
Sbjct: 193 SPWGPG 198


>sp|SYC_SACS2|CYSTEINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 AWGPGE 9
AW PGE
Sbjct: 186 AWKPGE 191


>sp|SYC_STAMF|CYSTEINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 4 AWGPGE 9
AW PGE
Sbjct: 186 AWKPGE 191


>sp|SYC_SULTO|CYSTEINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 AWGPGE 9
AW PGE
Sbjct: 184 AWKPGE 189


>sp|MDH_PYRIL|MALATE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 SAWGPG 8
S WGPG
Sbjct: 222 SNWGPG 227


>sp|MDH_SULAC|MALATE dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 SAWGPG 8
+ WGPG
Sbjct: 219 TTWGPG 224


>sp|SYC_SULAC|CYSTEINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 AWGPGE 9
AW PGE
Sbjct: 185 AWKPGE 190


>sp|PELO_CENSY|PROTEIN pelota homolog|Cenarchaeum symbiosum (strain A)

Query: 5 WGPGE 9
WGPGE
Sbjct: 113 WGPGE 117


>sp|GGGPS_AERPE|GERANYLGERANYLGLYCERYL phosphate synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DPSAWGPGE 9
DP GPGE
Sbjct: 27 DPDKTGPGE 35


>sp|SYS_PYRHO|SERINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DPSAWGPGE 9
D AW PG+
Sbjct: 357 DIEAWMPGQ 365


>sp|SYS_PYRFU|SERINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DPSAWGPGE 9
D AW PG+
Sbjct: 357 DIEAWMPGQ 365


>sp|SYS_PYRAB|SERINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 DPSAWGPGE 9
D AW PG+
Sbjct: 357 DIEAWMPGQ 365


>sp|LYSK_PYRHO|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus horikoshii

Query: 1 DPSAWGPGE 9
D A+GPG+
Sbjct: 284 DAVAYGPGD 292


>sp|LYSK_THEKO|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Thermococcus kodakarensis

Query: 1 DPSAWGPGE 9
D A+GPG+
Sbjct: 284 DAVAYGPGD 292


>sp|LYSK_PYRAB|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus abyssi (strain

Query: 1 DPSAWGPGE 9
D A+GPG+
Sbjct: 285 DAVAYGPGD 293




60|SequenceR|305|296|QLAVNDPSAW

>sp|GLYA_METS5|SERINE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 3 AVNDPSA 9
AVNDPS
Sbjct: 353 AVNDPSG 359


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 2 LAVNDPSAW 10
L VND AW
Sbjct: 1073 LNVNDKRAW 1081


>sp|RS3A_METVS|SMALL ribosomal subunit protein eS1|Methanococcus vannielii (strain

Query: 1 QLAVNDPSA 9
Q NDPSA
Sbjct: 40 QTPANDPSA 48


>sp|WTPB_ARCFU|MOLYBDATE/TUNGSTATE transport system permease protein|Archaeoglobus fulgidus (strain

Query: 3 AVNDPSAW 10
A +DP+ W
Sbjct: 41 AASDPAVW 48


>sp|MTXH_METAC|PUTATIVE methyltransferase mtx subunit H|Methanosarcina acetivorans (strain

Query: 5 NDPSAW 10
N PSAW
Sbjct: 229 NAPSAW 234


>sp|MTXH_METMA|PUTATIVE methyltransferase mtx subunit H|Methanosarcina mazei (strain ATCC

Query: 5 NDPSAW 10
N PSAW
Sbjct: 229 NAPSAW 234


>sp|MTXH_METBF|PUTATIVE methyltransferase mtx subunit H|Methanosarcina barkeri (strain

Query: 5 NDPSAW 10
N PSAW
Sbjct: 229 NAPSAW 234


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain ATCC

Query: 2 LAVNDPSAW 10
+ +DPS W
Sbjct: 117 MVADDPSMW 125


>sp|DSRA_ARCFU|SULFITE reductase, dissimilatory-type subunit alpha|Archaeoglobus fulgidus

Query: 2 LAVNDPSAW 10
+ +N PS W
Sbjct: 98 MRINQPSGW 106


>sp|KTHY_METLZ|PROBABLE thymidylate kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 VNDPSAW 10
V DP AW
Sbjct: 104 VPDPKAW 110




61|SequenceR|310|301|IANAVQLAVN

***** No hits found ******


62|SequenceR|315|306|DYHGIIANAV

>sp|HEM3_SULTO|PROBABLE porphobilinogen deaminase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DYHGIIANA 9
D+HGII+++
Sbjct: 247 DFHGIISSS 255


>sp|DHYS_METS5|PROBABLE deoxyhypusine synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 DYHGIIANAV 10
DY G++ NAV
Sbjct: 133 DYGGMVENAV 142


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DYHGIIANAV 10
+YH IAN +
Sbjct: 674 NYHNFIANGI 683


>sp|CAS8_THETK|CRISPR system associated protein Cas8|Thermoproteus tenax (strain ATCC

Query: 3 HGIIANAV 10
HGIIA+A+
Sbjct: 13 HGIIADAL 20


>sp|SAT_ARCFU|SULFATE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 HGIIANAV 10
HGI+ NA+
Sbjct: 245 HGILVNAI 252


>sp|Y258_ARCFU|UNCHARACTERIZED protein AF_0258|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DYHGIIA 7
+YHGI++
Sbjct: 93 EYHGIVS 99


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 1 DYHGIIANA 9
DY GI+A +
Sbjct: 354 DYEGIVAES 362


>sp|TOP6B_SACSH|TYPE 2 DNA topoisomerase 6|Saccharolobus shibatae (strain ATCC 51178

Query: 1 DYHGIIAN 8
D HGI+ N
Sbjct: 48 DVHGILPN 55


>sp|TOP6B_SACS2|TYPE 2 DNA topoisomerase 6|Saccharolobus solfataricus (strain ATCC

Query: 1 DYHGIIAN 8
D HGI+ N
Sbjct: 48 DVHGILPN 55


>sp|TOP6B_SACI7|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 DYHGIIAN 8
D HGI+ N
Sbjct: 48 DVHGILPN 55


>sp|TOP6B_SACI6|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.4 /

Query: 1 DYHGIIAN 8
D HGI+ N
Sbjct: 48 DVHGILPN 55


>sp|TOP6B_SACI4|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DYHGIIAN 8
D HGI+ N
Sbjct: 48 DVHGILPN 55


>sp|TOP6B_SACI3|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.27)

Query: 1 DYHGIIAN 8
D HGI+ N
Sbjct: 48 DVHGILPN 55


>sp|TOP6B_SACI2|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 DYHGIIAN 8
D HGI+ N
Sbjct: 48 DVHGILPN 55


>sp|TOP6B_SACI1|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 DYHGIIAN 8
D HGI+ N
Sbjct: 48 DVHGILPN 55


>sp|RL21_NANEQ|LARGE ribosomal subunit protein eL21|Nanoarchaeum equitans (strain

Query: 2 YHGIIANAV 10
YHG++ V
Sbjct: 59 YHGLVGTVV 67


>sp|Y1296_METAC|PUTATIVE RNase MA_1296|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DYHGIIANAV 10
DY G+ NAV
Sbjct: 81 DYFGVDINAV 90


>sp|COBQ_THEAC|PROBABLE cobyric acid synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 HGIIAN 8
HGI+AN
Sbjct: 416 HGILAN 421




63|SequenceR|320|311|GGYTCDYHGI

>sp|COFC_NATPD|2-PHOSPHO-L-LACTATE guanylyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GYTCDYHG 9
G+T DYHG
Sbjct: 124 GFTVDYHG 131


>sp|PUS10_NITMS|TRNA pseudouridine synthase Pus10|Nitrosopumilus maritimus (strain SCM1)

Query: 1 GGYTCDYHGI 10
G CD+HGI
Sbjct: 185 GCRICDFHGI 194


>sp|HMDH_ARCFU|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GGYTCDYHG 9
GG+T DY G
Sbjct: 117 GGFTTDYTG 125


>sp|PYRC_METMA|DIHYDROOROTASE mazei (strain ATCC BAA-159

Query: 1 GGYTCDYH 8
G +CDYH
Sbjct: 196 GDVSCDYH 203


>sp|PUR2_METMP|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GGYTCDYHGI 10
G Y+C HG+
Sbjct: 237 GSYSCPNHGL 246


>sp|PUR2_METM7|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C7 /

Query: 1 GGYTCDYHGI 10
G Y+C HG+
Sbjct: 237 GSYSCPNHGL 246


>sp|PUR2_METM6|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C6 /

Query: 1 GGYTCDYHGI 10
G Y+C HG+
Sbjct: 237 GSYSCPNHGL 246


>sp|PUR2_METM5|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C5 /

Query: 1 GGYTCDYHGI 10
G Y+C HG+
Sbjct: 237 GSYSCPNHGL 246


>sp|HYD2B_PYRFU|SULFHYDROGENASE 2 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GGYTCDYHGI 10
G ++CD HGI
Sbjct: 88 GVHSCDIHGI 97


>sp|PDAD1_ARCFU|PYRUVOYL-DEPENDENT arginine decarboxylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GYTCDYHG 9
GY +YHG
Sbjct: 97 GYLTEYHG 104


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 2 GYTCDYHG 9
GYT D HG
Sbjct: 754 GYTHDIHG 761


>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 2 GYTCD 6
GYTCD
Sbjct: 706 GYTCD 710


>sp|AROE_THEAC|SHIKIMATE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GYTCDYHGI 10
GY DY+G+
Sbjct: 98 GYNTDYYGL 106


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 2 GYTCDYHG 9
GYT D HG
Sbjct: 784 GYTQDMHG 791


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 2 GYTCDYHG 9
GYT D HG
Sbjct: 860 GYTEDIHG 867


>sp|AROE_SACI7|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 GGYTCDYHGI 10
GGY DY I
Sbjct: 99 GGYNTDYLAI 108


>sp|AROE_SACI1|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 GGYTCDYHGI 10
GGY DY I
Sbjct: 99 GGYNTDYLAI 108


>sp|CAR_HALS3|TRANSDUCER protein Car|Halobacterium salinarum (strain ATCC 29341

Query: 5 CDYHGI 10
C YHG+
Sbjct: 132 CQYHGV 137


>sp|Y896_ARCFU|UNCHARACTERIZED protein AF_0896|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GGYTCDYHGI 10
G Y DY GI
Sbjct: 206 GTYRLDYRGI 215


>sp|Y1348_METJA|UNCHARACTERIZED protein MJ1348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 CDYHGI 10
CDY+G+
Sbjct: 56 CDYYGL 61


>sp|FOLD_NITMS|BIFUNCTIONAL protein FolD|Nitrosopumilus maritimus (strain SCM1)

Query: 6 DYHGI 10
DYHGI
Sbjct: 150 DYHGI 154


>sp|MVHA_METFE|F420-NON-REDUCING hydrogenase subunit A|Methanothermus fervidus

Query: 3 YTCDYHGI 10
Y CD +GI
Sbjct: 382 YACDKNGI 389


>sp|DNLJ_HALWD|DNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GGYTCD 6
GG TCD
Sbjct: 497 GGLTCD 502


>sp|COFC_HALVD|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloferax volcanii (strain ATCC 29605

Query: 3 YTCDYHG 9
++ DYHG
Sbjct: 129 FSVDYHG 135


>sp|ARGC_META3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GGYTCDYHG 9
GG+ D HG
Sbjct: 294 GGFEIDRHG 302


>sp|AROE_THEVO|SHIKIMATE dehydrogenase (NADP(+))|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GYTCDYHGI 10
G+ DY+GI
Sbjct: 99 GFNTDYYGI 107


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GYTCDYHG 9
G+T D HG
Sbjct: 591 GFTLDEHG 598


>sp|Y1577_METJA|UNCHARACTERIZED protein MJ1577|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GYTCDYHG 9
GY DY G
Sbjct: 103 GYVVDYKG 110


>sp|ARGC_METM5|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C5 /

Query: 1 GGYTCDYHG 9
GG+ D HG
Sbjct: 293 GGFEIDQHG 301


>sp|ARADH_HALVD|L-ARABINOSE 1-dehydrogenase (NAD(P)(+))|Haloferax volcanii (strain ATCC 29605

Query: 1 GGYTCDYHGI 10
G Y D HG+
Sbjct: 153 GNYYADRHGL 162


>sp|ARGC_METJA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGYTCDYHG 9
GG+ D HG
Sbjct: 291 GGFEIDEHG 299


>sp|PURL_HALLT|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 GGYTCDYHG 9
G Y C++ G
Sbjct: 352 GNYVCEFAG 360


>sp|ARGC_METM7|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C7 /

Query: 1 GGYTCDYHG 9
GG+ D HG
Sbjct: 293 GGFEIDQHG 301


>sp|ARGC_METM6|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C6 /

Query: 1 GGYTCDYHG 9
GG+ D HG
Sbjct: 293 GGFEIDQHG 301


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 2 GYTCDYHG 9
GY D HG
Sbjct: 843 GYETDIHG 850


>sp|COOS_METJA|CARBON monoxide dehydrogenase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 YTCDYHGI 10
+ C +HG+
Sbjct: 334 FNCTFHGL 341


>sp|ENDA_AERPE|TRNA-SPLICING endonuclease|Aeropyrum pernix (strain ATCC 700893

Query: 3 YTCDYHG 9
Y+C Y+G
Sbjct: 31 YSCGYYG 37


>sp|PUR2_THEKO|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GGYTCDYH 8
G Y+C+ H
Sbjct: 228 GSYSCEDH 235


>sp|LEUC2_ARCFU|3-ISOPROPYLMALATE dehydratase large subunit 2|Archaeoglobus fulgidus (strain ATCC

Query: 3 YTCDYHGI 10
+TC Y GI
Sbjct: 120 HTCTYGGI 127


>sp|Y2298_ARCFU|UNCHARACTERIZED DNA primase small subunit-like|Archaeoglobus fulgidus (strain ATCC

Query: 4 TCDYHG 9
+C YHG
Sbjct: 134 SCPYHG 139


>sp|SYE_HALWD|GLUTAMATE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GGYTCDYHG 9
G YTC G
Sbjct: 205 GAYTCSCSG 213


>sp|CBIT_METS3|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 GGYTCDY 7
GG TC++
Sbjct: 45 GGITCEF 51


>sp|PURL_HALSA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 700922

Query: 1 GGYTCDYHG 9
G Y C++ G
Sbjct: 336 GNYVCEFDG 344


>sp|PURL_HALS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 29341

Query: 1 GGYTCDYHG 9
G Y C++ G
Sbjct: 336 GNYVCEFDG 344




64|SequenceR|325|316|SLHVGGGYTC

>sp|CBIA_METST|COBYRINATE a,c-diamide synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 SLHVGGGY 8
+L++GGGY
Sbjct: 293 ALYIGGGY 300


>sp|SYE_HALSA|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 VGGGYTC 10
+GG YTC
Sbjct: 198 MGGAYTC 204


>sp|SYE_HALS3|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 4 VGGGYTC 10
+GG YTC
Sbjct: 198 MGGAYTC 204


>sp|SYE_NATPD|GLUTAMATE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LHVGGGYTC 10
+ GG YTC
Sbjct: 196 IKAGGAYTC 204


>sp|CBIA_THEVO|COBYRINATE a,c-diamide synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LHVGGGY 8
L++GGGY
Sbjct: 289 LYIGGGY 295


>sp|CBIA_METS3|COBYRINATE a,c-diamide synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LHVGGGY 8
L++GGGY
Sbjct: 290 LYIGGGY 296


>sp|CBIA_METJA|COBYRINATE a,c-diamide synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LHVGGGY 8
L++GGGY
Sbjct: 292 LYIGGGY 298


>sp|SYE_HALWD|GLUTAMATE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LHVGGGYTC 10
+ GG YTC
Sbjct: 201 IDAGGAYTC 209


>sp|SYE_HALMA|GLUTAMATE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 5 GGGYTC 10
GG YTC
Sbjct: 199 GGAYTC 204


>sp|SYFB_SULTO|PHENYLALANINE--TRNA ligase beta subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LHVGGGYT 9
L VGGG+T
Sbjct: 367 LSVGGGFT 374


>sp|KADA_PYRAE|ADENYLATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SLHVGGGY 8
S+ +GGGY
Sbjct: 86 SIKIGGGY 93


>sp|SYE_METLZ|GLUTAMATE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LHVGGGYTC 10
L +GG Y C
Sbjct: 188 LELGGAYMC 196


>sp|CBIA_SULTO|COBYRINATE a,c-diamide synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LHVGGGY 8
++VGGGY
Sbjct: 286 IYVGGGY 292


>sp|CBIA_METBF|COBYRINATE a,c-diamide synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LHVGGGY 8
L++GGGY
Sbjct: 314 LYIGGGY 320


>sp|CBIA_SACS2|COBYRINATE a,c-diamide synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SLHVGGGY 8
++++GGGY
Sbjct: 281 AIYIGGGY 288


>sp|CBIA_METVS|COBYRINATE a,c-diamide synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LHVGGGY 8
L++GGGY
Sbjct: 296 LYLGGGY 302


>sp|BTUFA_HALSA|COBALAMIN-BINDING protein|Halobacterium salinarum (strain ATCC 700922

Query: 3 HVGGGYT 9
H+G GYT
Sbjct: 204 HLGDGYT 210


>sp|BTUFA_HALS3|COBALAMIN-BINDING protein|Halobacterium salinarum (strain ATCC 29341

Query: 3 HVGGGYT 9
H+G GYT
Sbjct: 204 HLGDGYT 210


>sp|MTAP_CENSY|S-METHYL-5'-THIOADENOSINE phosphorylase|Cenarchaeum symbiosum (strain A)

Query: 3 HVGGGYTC 10
H GG Y C
Sbjct: 131 HDGGTYAC 138


>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LHVGGGY 8
+++GGGY
Sbjct: 284 IYIGGGY 290


>sp|CBIA_METTH|COBYRINATE a,c-diamide synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 SLHVGGGY 8
++++GGGY
Sbjct: 290 AVYIGGGY 297


>sp|CBIA_ARCFU|COBYRINATE a,c-diamide synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SLHVGGGY 8
+L++GGG+
Sbjct: 296 ALYIGGGF 303


>sp|PURL_THESM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus sibiricus (strain DSM 12597

Query: 5 GGGYTC 10
GGG TC
Sbjct: 255 GGGLTC 260


>sp|PURL_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus kodakarensis (strain ATCC

Query: 5 GGGYTC 10
GGG TC
Sbjct: 255 GGGLTC 260


>sp|PURL_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus gammatolerans (strain DSM 15229

Query: 5 GGGYTC 10
GGG TC
Sbjct: 254 GGGLTC 259


>sp|PURL_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 GGGYTC 10
GGG TC
Sbjct: 255 GGGLTC 260


>sp|PURL_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus furiosus (strain ATCC 43587

Query: 5 GGGYTC 10
GGG TC
Sbjct: 255 GGGLTC 260


>sp|PURL_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus abyssi (strain GE5 /

Query: 5 GGGYTC 10
GGG TC
Sbjct: 255 GGGLTC 260


>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 5 GGGYTC 10
GGG TC
Sbjct: 288 GGGLTC 293


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 5 GGGYTC 10
GGG TC
Sbjct: 257 GGGLTC 262


>sp|PURL_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 GGGYTC 10
GGG TC
Sbjct: 257 GGGLTC 262


>sp|PURL_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanobrevibacter smithii (strain ATCC 35061

Query: 5 GGGYTC 10
GGG TC
Sbjct: 257 GGGLTC 262


>sp|WTPA_ARCFU|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LHVGGG 7
+H+GGG
Sbjct: 1 MHIGGG 6


>sp|MTRH_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanosarcina acetivorans (strain

Query: 2 LHVGGGY 8
L VGGGY
Sbjct: 222 LPVGGGY 228


>sp|RS7_PICTO|SMALL ribosomal subunit protein uS7|Picrophilus torridus (strain ATCC

Query: 1 SLHVGGGYT 9
+LH GG Y+
Sbjct: 32 NLHTGGRYS 40


>sp|CBIA_METM7|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C7 /

Query: 1 SLHVGGGY 8
++++GGGY
Sbjct: 295 TIYLGGGY 302


>sp|CBIA_METM5|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C5 /

Query: 1 SLHVGGGY 8
++++GGGY
Sbjct: 295 TIYLGGGY 302


>sp|SYE_METMJ|GLUTAMATE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LHVGGGYTC 10
+ +GG Y C
Sbjct: 187 IELGGAYVC 195


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 5 GGGYTC 10
GGG TC
Sbjct: 257 GGGLTC 262


>sp|CBIA_METAC|COBYRINATE a,c-diamide synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LHVGGGY 8
L++GGGY
Sbjct: 317 LYIGGGY 323


>sp|TFE_METB6|TRANSCRIPTION factor E|Methanoregula boonei (strain DSM 21154

Query: 1 SLHVGGGYTC 10
++ +GG +TC
Sbjct: 131 TVAMGGNFTC 140


>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 GGGYT 9
GGGYT
Sbjct: 312 GGGYT 316


>sp|MTAB_METBF|METHANOL--CORRINOID protein co-methyltransferase|Methanosarcina barkeri (strain

Query: 2 LHVGGGYT 9
L +G GYT
Sbjct: 32 LEIGAGYT 39


>sp|CBIA_PICTO|COBYRINATE a,c-diamide synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 LHVGGGY 8
L++GGG+
Sbjct: 291 LYIGGGF 297


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 HVGGGY 8
+VGGGY
Sbjct: 354 NVGGGY 359


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 HVGGGY 8
+VGGGY
Sbjct: 361 NVGGGY 366


>sp|RFCL_METBU|REPLICATION factor C large subunit|Methanococcoides burtonii (strain DSM 6242

Query: 3 HVGGGYT 9
HVG G+T
Sbjct: 328 HVGRGFT 334


>sp|MTRH_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanosarcina mazei (strain ATCC

Query: 2 LHVGGGY 8
L +GGGY
Sbjct: 222 LPIGGGY 228


>sp|MTRH_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanosarcina barkeri (strain Fusaro

Query: 2 LHVGGGY 8
L +GGGY
Sbjct: 222 LPIGGGY 228


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 3 HVGGGY 8
H+ GGY
Sbjct: 507 HISGGY 512


>sp|PRIL_PYRHO|DNA primase large subunit PriL|Pyrococcus horikoshii (strain ATCC

Query: 3 HVGGGYT 9
H+G GYT
Sbjct: 315 HLGFGYT 321


>sp|PRIL_PYRFU|DNA primase large subunit PriL|Pyrococcus furiosus (strain ATCC 43587

Query: 3 HVGGGYT 9
H+G GYT
Sbjct: 315 HLGFGYT 321


>sp|PRIL_PYRAB|DNA primase large subunit PriL|Pyrococcus abyssi (strain GE5 /

Query: 3 HVGGGYT 9
H+G GYT
Sbjct: 314 HLGFGYT 320


>sp|AGLUS_ARCFU|ARCHAEAL glutamate synthase [NADPH]|Archaeoglobus fulgidus (strain ATCC

Query: 1 SLHVGGGYTC 10
S+ V GG+ C
Sbjct: 387 SILVAGGFRC 396


>sp|MTAP_PYRAE|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 HVGGGYTC 10
H GG Y C
Sbjct: 169 HDGGCYVC 176




65|SequenceR|330|321|SALPSSLHVG

>sp|GATE_THESM|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus sibiricus (strain DSM

Query: 1 SALPSSLH 8
SA+PS LH
Sbjct: 29 SAVPSQLH 36


>sp|PRIS_METS3|DNA primase small subunit PriS|Methanobrevibacter smithii (strain ATCC

Query: 3 LPSSLH 8
LPSSLH
Sbjct: 287 LPSSLH 292


>sp|PRIS_HALWD|DNA primase small subunit PriS|Haloquadratum walsbyi (strain DSM 16790

Query: 3 LPSSLHVG 10
LP SLH G
Sbjct: 301 LPGSLHGG 308


>sp|PRIS_HALSA|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 3 LPSSLHVG 10
LP SLH G
Sbjct: 307 LPGSLHGG 314


>sp|PRIS_HALS3|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 3 LPSSLHVG 10
LP SLH G
Sbjct: 307 LPGSLHGG 314


>sp|PRIS_HALMA|DNA primase small subunit PriS|Haloarcula marismortui (strain ATCC

Query: 3 LPSSLHVG 10
LP SLH G
Sbjct: 308 LPGSLHGG 315




66|SequenceR|335|326|NAVAGSALPS

***** No hits found ******


67|SequenceR|340|331|SQCLKNAVAG

>sp|ADEC_METB6|ADENINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 2 QCLKNAVAG 10
+C++ AVAG
Sbjct: 283 RCIRTAVAG 291


>sp|PRIL_PYRHO|DNA primase large subunit PriL|Pyrococcus horikoshii (strain ATCC

Query: 3 CLKNAVAG 10
C+KNA+ G
Sbjct: 231 CIKNALKG 238


>sp|Y1446_ARCFU|UNCHARACTERIZED protein AF_1446|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CLKNAVAG 10
C+K+A+AG
Sbjct: 27 CIKHAMAG 34


>sp|PRIL_PYRAB|DNA primase large subunit PriL|Pyrococcus abyssi (strain GE5 /

Query: 3 CLKNAVAG 10
C+KNA+ G
Sbjct: 230 CVKNALKG 237


>sp|PRIL_PYRFU|DNA primase large subunit PriL|Pyrococcus furiosus (strain ATCC 43587

Query: 3 CLKNAVAG 10
C+KNA+ G
Sbjct: 231 CVKNALRG 238


>sp|APGM_SULAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 QCLKNAVAG 10
+ LKN++AG
Sbjct: 38 ELLKNSIAG 46




68|SequenceR|345|336|SFTQFSQCLK

>sp|ALDC_METMA|ALPHA-ACETOLACTATE decarboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SFTQFSQC 8
SFT FS C
Sbjct: 17 SFTLFSGC 24


>sp|Y978_PYRFU|UPF0252 protein PF0978|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SFTQFSQCLK 10
SFTQ CL+
Sbjct: 24 SFTQTPTCLE 33




69|SequenceR|350|341|EAYCISFTQF

>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 3 YCISFTQF 10
YC+ TQF
Sbjct: 287 YCMGITQF 294


>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 3 YCISFTQF 10
YC+ TQF
Sbjct: 286 YCMGVTQF 293


>sp|CBID_SULTO|COBALT-PRECORRIN-5B C(1)-methyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EAYCISFTQF 10
E YC + T+F
Sbjct: 58 EEYCATVTKF 67




70|SequenceR|355|346|GLLGTEAYCI

>sp|PUS10_ACIS3|TRNA pseudouridine synthase Pus10|Acidilobus saccharovorans (strain DSM

Query: 1 GLLGTEAYCI 10
GLLGT A C+
Sbjct: 380 GLLGTAAECV 389


>sp|AATD_METBU|A-TYPE ATP synthase subunit D|Methanococcoides burtonii (strain DSM 6242

Query: 1 GLLGTEAY 8
GLLGT +Y
Sbjct: 121 GLLGTSSY 128


>sp|COOS_ARCFU|CARBON monoxide dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LLGTEAY 8
+LGTEAY
Sbjct: 85 MLGTEAY 91


>sp|RL5_NANEQ|LARGE ribosomal subunit protein uL5|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GLLGTEAY 8
GL+G EAY
Sbjct: 118 GLIGLEAY 125


>sp|RNP1_THESM|RIBONUCLEASE P protein component 1|Thermococcus sibiricus (strain DSM 12597

Query: 1 GLLGTEAYCI 10
GL+G E Y I
Sbjct: 62 GLIGIEGYVI 71


>sp|PUS10_PYRFU|TRNA pseudouridine synthase Pus10|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LLGTEAYC 9
+LG EA+C
Sbjct: 365 ILGKEAWC 372


>sp|COABC_METJA|COENZYME A biosynthesis bifunctional protein|Methanocaldococcus jannaschii

Query: 4 GTEAYCI 10
G E YCI
Sbjct: 49 GAEVYCI 55


>sp|MCRA_METVA|METHYL-COENZYME M reductase subunit alpha|Methanococcus vannielii

Query: 2 LLGTEAYC 9
L GT++YC
Sbjct: 78 LSGTDSYC 85


>sp|Y1375_METJA|UNCHARACTERIZED membrane protein MJ1375|Methanocaldococcus jannaschii (strain

Query: 2 LLGTEAYCI 10
LLGTEA+ I
Sbjct: 31 LLGTEAFGI 39


>sp|CCA_PYRNV|CCA-ADDING enzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 LLGTEAYCI 10
+LGT AY I
Sbjct: 368 VLGTRAYVI 376


>sp|PUS10_AERPE|TRNA pseudouridine synthase Pus10|Aeropyrum pernix (strain ATCC 700893

Query: 2 LLGTEAYCI 10
+LG EA CI
Sbjct: 413 VLGREAVCI 421


>sp|RPO10_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo10|Thermoplasma volcanium (strain ATCC

Query: 3 LGTEAYC 9
LG E YC
Sbjct: 47 LGVERYC 53




71|SequenceR|360|351|CVFHAGLLGT

>sp|DCDB_METVS|DCTP deaminase, dUMP-forming|Methanococcus vannielii (strain ATCC

Query: 1 CVFHAGLLGT 10
CV GLLGT
Sbjct: 90 CVVSGGLLGT 99


>sp|DCDB_METMP|DCTP deaminase, dUMP-forming|Methanococcus maripaludis (strain DSM

Query: 1 CVFHAGLLGT 10
CV GLLGT
Sbjct: 90 CVVSGGLLGT 99


>sp|DCDB_METM6|DCTP deaminase, dUMP-forming|Methanococcus maripaludis (strain C6 /

Query: 1 CVFHAGLLGT 10
CV GLLGT
Sbjct: 90 CVVSGGLLGT 99


>sp|DCDB_METM5|DCTP deaminase, dUMP-forming|Methanococcus maripaludis (strain C5 /

Query: 1 CVFHAGLLGT 10
CV GLLGT
Sbjct: 90 CVVSGGLLGT 99


>sp|DCDB_METM7|DCTP deaminase, dUMP-forming|Methanococcus maripaludis (strain C7 /

Query: 1 CVFHAGLLGT 10
C+ GLLGT
Sbjct: 90 CIVSGGLLGT 99


>sp|GLMS_AERPE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Aeropyrum pernix (strain ATCC 700893

Query: 3 FHAGLLG 9
FHAGL+G
Sbjct: 312 FHAGLVG 318


>sp|GLMS_METMA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina mazei (strain ATCC

Query: 3 FHAGLLG 9
+HAGLLG
Sbjct: 314 WHAGLLG 320


>sp|GLMS_METAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina acetivorans (strain

Query: 3 FHAGLLG 9
+HAGLLG
Sbjct: 314 WHAGLLG 320


>sp|Y816_METB6|UPF0173 metal-dependent hydrolase Mboo_0816|Methanoregula boonei (strain

Query: 1 CVFHAGLLG 9
CV+HAG G
Sbjct: 125 CVYHAGDTG 133


>sp|TIAS_IGNAA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignisphaera aggregans (strain

Query: 1 CVFHAGL 7
C++H GL
Sbjct: 6 CIYHIGL 12


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 3 FHAGLL 8
FHAGL+
Sbjct: 198 FHAGLM 203


>sp|Y796_METKA|UPF0288 protein MK0796|Methanopyrus kandleri (strain AV19 /

Query: 4 HAGLLG 9
HAGL+G
Sbjct: 453 HAGLIG 458




72|SequenceR|365|356|IKMRDCVFHA

>sp|SUCC1_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit beta|Archaeoglobus fulgidus (strain

Query: 1 IKMRDCVFH 9
+KM++C+ H
Sbjct: 288 VKMKNCLLH 296


>sp|AROE_METMA|SHIKIMATE dehydrogenase (NADP(+))|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 DCVFHA 10
DC++HA
Sbjct: 31 DCIYHA 36


>sp|AROE_METBF|SHIKIMATE dehydrogenase (NADP(+))|Methanosarcina barkeri (strain Fusaro /

Query: 5 DCVFHA 10
DC++HA
Sbjct: 31 DCIYHA 36


>sp|AROE_METAC|SHIKIMATE dehydrogenase (NADP(+))|Methanosarcina acetivorans (strain ATCC

Query: 5 DCVFHA 10
DC++HA
Sbjct: 31 DCIYHA 36


>sp|DPHB_PYRAE|DIPHTHINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IKMRDCVFH 9
IK DCVF+
Sbjct: 22 IKNADCVFY 30


>sp|Y1153_METTH|UNCHARACTERIZED protein MTH_1153|Methanothermobacter thermautotrophicus (strain

Query: 2 KMRDCVF 8
+ RDC+F
Sbjct: 471 RFRDCIF 477


>sp|PRIL_PYRFU|DNA primase large subunit PriL|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IKMRDCV 7
+K+RDC+
Sbjct: 270 VKIRDCI 276


>sp|EF2_CENSY|ELONGATION factor 2|Cenarchaeum symbiosum (strain A)

Query: 2 KMRDCVF 8
+MRDC F
Sbjct: 576 QMRDCKF 582


>sp|Y977_METKA|UNCHARACTERIZED glycosyltransferase MK0977|Methanopyrus kandleri (strain AV19 /

Query: 1 IKMRDCVFHA 10
+ + DC FHA
Sbjct: 84 VVVSDCQFHA 93


>sp|Y1859_ARCFU|UNCHARACTERIZED protein AF_1859|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 DCVFHA 10
DC++HA
Sbjct: 57 DCLYHA 62


>sp|AROE_METBU|SHIKIMATE dehydrogenase (NADP(+))|Methanococcoides burtonii (strain DSM

Query: 5 DCVFHA 10
DC +HA
Sbjct: 31 DCTYHA 36


>sp|EF2_METM5|ELONGATION factor 2|Methanococcus maripaludis (strain C5 /

Query: 1 IKMRDCVFH 9
IK+ D FH
Sbjct: 590 IKLMDATFH 598




73|SequenceR|370|361|FMMDDIKMRD

>sp|TYSY_METBF|PUTATIVE thymidylate synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 MMDDIKMRD 10
M+DD K+RD
Sbjct: 141 MLDDFKIRD 149


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 MMDDIKMRD 10
MM+D+K+R+
Sbjct: 790 MMEDLKIRE 798


>sp|TYSY_METMA|PUTATIVE thymidylate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 MMDDIKMRD 10
++DD K+RD
Sbjct: 141 ILDDFKIRD 149


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 MMDDIKMRD 10
MM++ KM+D
Sbjct: 374 MMNEFKMQD 382


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 MDDIKMRD 10
+DDI+ RD
Sbjct: 506 LDDIQFRD 513


>sp|TYSY_METAC|PUTATIVE thymidylate synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 MMDDIKMRD 10
++DD K+RD
Sbjct: 141 ILDDFKIRD 149


>sp|CARB2_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 3 MDDIKMRD 10
MD+I++RD
Sbjct: 29 MDEIEVRD 36


>sp|PURL_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma volcanium (strain ATCC 51530

Query: 3 MDDIKMRD 10
+DDIK++D
Sbjct: 313 LDDIKLKD 320


>sp|TYSY_METBU|PUTATIVE thymidylate synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 MMDDIKMRD 10
++DD K+RD
Sbjct: 141 IIDDFKIRD 149


>sp|PELO_NATPD|PROTEIN pelota homolog|Natronomonas pharaonis (strain ATCC 35678

Query: 4 DDIKMRD 10
DD KMRD
Sbjct: 50 DDDKMRD 56




74|SequenceR|375|366|QGQLVFMMDD

>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 1 QGQLVFMMD 9
+GQL+F+ D
Sbjct: 471 EGQLIFLSD 479


>sp|FDHD_SACS2|SULFUR carrier protein FdhD|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QGQLVFMMDD 10
QG+L+F+ +D
Sbjct: 159 QGELLFIYED 168




75|SequenceR|380|371|CLRMWQGQLV

>sp|AMPA_AERPE|PROBABLE cytosol aminopeptidase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LRMWQGQLV 10
+RMW G +V
Sbjct: 316 IRMWDGTMV 324


>sp|NADE_HYPBU|NH(3)-DEPENDENT NAD(+) synthetase|Hyperthermus butylicus (strain DSM 5456

Query: 3 RMWQGQL 9
R+W GQL
Sbjct: 196 RLWPGQL 202


>sp|TF2B2_THEKO|TRANSCRIPTION initiation factor IIB 2|Thermococcus kodakarensis (strain ATCC

Query: 2 LRMWQGQL 9
LRMWQ ++
Sbjct: 101 LRMWQRRM 108


>sp|EF2_PYRAE|ELONGATION factor 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 RMWQGQL 9
R+W+G+L
Sbjct: 273 RLWRGEL 279


>sp|G6PI_METMP|PROBABLE glucose-6-phosphate isomerase|Methanococcus maripaludis (strain DSM

Query: 4 MWQGQL 9
MW GQL
Sbjct: 272 MWYGQL 277


>sp|GCSPA_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 5 WQGQLV 10
W GQLV
Sbjct: 289 WDGQLV 294


>sp|DPCKG_METS5|GTP-DEPENDENT dephospho-CoA kinase|Metallosphaera sedula (strain ATCC 51363

Query: 1 CLRMWQG 7
CL W+G
Sbjct: 150 CLENWEG 156


>sp|HDRE_METAC|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina acetivorans

Query: 2 LRMWQGQLV 10
L+ W GQ+V
Sbjct: 67 LKTWWGQVV 75




76|SequenceR|385|376|ETASTCLRMW

>sp|SYS_CENSY|SERINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 ETASTCLRMW 10
ETA+ LR W
Sbjct: 117 ETANVVLRKW 126


>sp|ARLY_ARCFU|ARGININOSUCCINATE lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ETASTCLRMW 10
+ +TCLRM+
Sbjct: 104 DEVATCLRMF 113


>sp|ARLY_METLZ|ARGININOSUCCINATE lyase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 ETASTCLRM 9
+ +TCLRM
Sbjct: 113 DEVATCLRM 121


>sp|HMDH_METTH|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 ETASTCL 7
ETAS CL
Sbjct: 343 ETASECL 349


>sp|TRUB_META3|PROBABLE tRNA pseudouridine synthase B|Methanococcus aeolicus (strain ATCC

Query: 1 ETASTCLRMW 10
E S C+ +W
Sbjct: 78 ENTSKCISVW 87




77|SequenceR|390|381|RAVESETAST

***** No hits found ******


78|SequenceR|395|386|LINKGRAVES

>sp|CDC63_SULAC|ORC1-TYPE DNA replication protein 3|Sulfolobus acidocaldarius (strain ATCC

Query: 1 LINKGRA 7
+INKGRA
Sbjct: 349 IINKGRA 355


>sp|GATB_HALMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloarcula marismortui (strain ATCC

Query: 1 LINKGRAVE 9
LI GRAVE
Sbjct: 269 LIQSGRAVE 277


>sp|RS3_METJA|SMALL ribosomal subunit protein uS3|Methanocaldococcus jannaschii (strain

Query: 1 LINKGRAV 8
L++KGRA+
Sbjct: 160 LVDKGRAI 167


>sp|CDC63_SULTO|ORC1-TYPE DNA replication protein 3|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LINKGRA 7
+INKGRA
Sbjct: 349 IINKGRA 355


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 LINKGRAVES 10
+INK RA++S
Sbjct: 709 IINKIRAIKS 718




79|SequenceR|400|391|VLANRLINKG

>sp|CAS1_PYRHO|CRISPR-ASSOCIATED endonuclease Cas1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LANRLINKG 10
+ANRL+ KG
Sbjct: 239 VANRLVKKG 247


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LANRLINKG 10
+ NRLI KG
Sbjct: 111 IVNRLIEKG 119


>sp|RS19_METJA|SMALL ribosomal subunit protein uS19|Methanocaldococcus jannaschii

Query: 3 ANRLINKG 10
A RL+NKG
Sbjct: 70 ARRLLNKG 77


>sp|ACD2_ARCFU|ACETATE--COA ligase [ADP-forming] II|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VLANRLIN 8
V ANRLIN
Sbjct: 600 VWANRLIN 607


>sp|CAS1_METJA|CRISPR-ASSOCIATED endonuclease Cas1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LANRLINKG 10
LANRL+ +G
Sbjct: 239 LANRLVKQG 247


>sp|TRM1_METHJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanospirillum hungatei

Query: 1 VLANRLINKG 10
VL NRL +KG
Sbjct: 333 VLLNRLRDKG 342


>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 5 RLINKG 10
RLINKG
Sbjct: 78 RLINKG 83


>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 5 RLINKG 10
RLINKG
Sbjct: 78 RLINKG 83


>sp|CDC6_METHJ|ORC1-TYPE DNA replication protein|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VLANRLINKG 10
V+ RL+N+G
Sbjct: 373 VINTRLVNRG 382


>sp|Y1255_METJA|UNCHARACTERIZED glycosyltransferase MJ1255|Methanocaldococcus jannaschii (strain

Query: 2 LANRLINK 9
+AN+LINK
Sbjct: 381 IANKLINK 388


>sp|HIS4_SACS2|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Saccharolobus solfataricus

Query: 2 LANRLINKG 10
LAN+L N+G
Sbjct: 35 LANKLYNEG 43


>sp|FLAB1_METJA|FLAGELLIN B1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LANRLINKG 10
L+N +INKG
Sbjct: 156 LSNGVINKG 164


>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain

Query: 5 RLINKG 10
RLINKG
Sbjct: 78 RLINKG 83


>sp|RS19_METVS|SMALL ribosomal subunit protein uS19|Methanococcus vannielii (strain

Query: 3 ANRLINKG 10
A RL+N+G
Sbjct: 78 ARRLVNRG 85


>sp|CAS1_THEKO|CRISPR-ASSOCIATED endonuclease Cas1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LANRLINKG 10
+ANRL+ +G
Sbjct: 243 IANRLVKQG 251


>sp|PURA_THEVO|ADENYLOSUCCINATE synthetase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VLANRLINKG 10
+L N+L N+G
Sbjct: 212 ILINKLYNEG 221


>sp|RADA_PYRHO|DNA repair and recombination protein|Pyrococcus horikoshii (strain ATCC

Query: 1 VLANRLINKG 10
VL R+I+KG
Sbjct: 275 VLRRRIISKG 284




80|SequenceR|405|396|GDLHSVLANR

>sp|FEN_NATPD|FLAP endonuclease 1|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GDLHSVLANR 10
GDL SVLA R
Sbjct: 248 GDLRSVLAAR 257


>sp|FEN_HALMA|FLAP endonuclease 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 GDLHSVLANR 10
GDL++VLA R
Sbjct: 246 GDLYTVLAAR 255


>sp|HELS_METVS|ATP-DEPENDENT DNA helicase Hel308|Methanococcus vannielii (strain ATCC 35089

Query: 1 GDLHSVLAN 9
G+LH VL N
Sbjct: 460 GNLHGVLTN 468


>sp|COBQ_THEAC|PROBABLE cobyric acid synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DLHSVLANR 10
++H +LANR
Sbjct: 414 NIHGILANR 422


>sp|FEN_METAC|FLAP endonuclease 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GDLHSVLANR 10
GD+H+VL +
Sbjct: 257 GDIHAVLREK 266


>sp|FEN_METBF|FLAP endonuclease 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 GDLHSVLANR 10
GD+H+VL +
Sbjct: 257 GDIHAVLREK 266


>sp|ASPD_METAR|L-ASPARTATE dehydrogenase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GDLHSVLAN 9
G+LH+V+ N
Sbjct: 230 GELHTVVEN 238


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 1 GDLHSVLANR 10
G+LH V A R
Sbjct: 190 GELHEVSARR 199




81|SequenceR|410|401|CVPTTGDLHS

>sp|METXA_METLZ|HOMOSERINE O-acetyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 1 CVPTTGDLHS 10
C P TGD H+
Sbjct: 50 CHPLTGDAHA 59


>sp|CBIHC_ARCFU|COBALAMIN biosynthesis protein CbiHC|Archaeoglobus fulgidus (strain ATCC

Query: 1 CVPTTGDL 8
C+ TTGD+
Sbjct: 293 CIATTGDV 300


>sp|LIVH_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 2 VPTTGDL 8
VP TGDL
Sbjct: 225 VPATGDL 231


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 PTTGDLH 9
P TGD+H
Sbjct: 657 PETGDVH 663


>sp|GLCV_SACS2|GLUCOSE import ATP-binding protein GlcV|Saccharolobus solfataricus

Query: 2 VPTTGDLH 9
VP+TG+L+
Sbjct: 56 VPSTGELY 63


>sp|RS2_CALMQ|SMALL ribosomal subunit protein uS2|Caldivirga maquilingensis (strain

Query: 1 CVPTTGDL 8
C+P TG L
Sbjct: 100 CLPVTGRL 107


>sp|KTHY_METVS|PROBABLE thymidylate kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 CVPTTGDL 8
C PTTG +
Sbjct: 32 CEPTTGKI 39


>sp|QUEE_THEKO|7-CARBOXY-7-DEAZAGUANINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 TGDLHS 10
TGD+HS
Sbjct: 89 TGDIHS 94


>sp|MTXA_METMA|PUTATIVE methyltransferase Mtx subunit A|Methanosarcina mazei (strain ATCC

Query: 2 VPTTGDL 8
VPT+GD+
Sbjct: 145 VPTSGDV 151


>sp|DTDA_STAMF|D-AMINOACYL-TRNA deacylase|Staphylothermus marinus (strain ATCC 43588

Query: 1 CVPTTG 6
C+P TG
Sbjct: 190 CIPVTG 195


>sp|FTHS_HALMA|FORMATE--TETRAHYDROFOLATE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 5 TGDLHS 10
TGDLH+
Sbjct: 118 TGDLHA 123


>sp|MPTA_METLZ|GTP cyclohydrolase MptA|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 CVPTTGDL 8
CV T GD+
Sbjct: 206 CVETDGDI 213


>sp|FTHS_HALWD|FORMATE--TETRAHYDROFOLATE ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 5 TGDLHS 10
TGDLH+
Sbjct: 145 TGDLHA 150




82|SequenceR|415|406|RGIDECVPTT

>sp|ARFB_METTH|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanothermobacter thermautotrophicus

Query: 1 RGIDECVP 8
R +DEC+P
Sbjct: 162 RRLDECIP 169


>sp|TRPD_IGNH4|ANTHRANILATE phosphoribosyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GIDECVPTT 10
GIDE PT+
Sbjct: 223 GIDEVSPTS 231


>sp|ADEC_METBF|ADENINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GIDECVPTT 10
G+ CVP T
Sbjct: 108 GVPSCVPAT 116


>sp|ADEC_METAC|ADENINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GIDECVPTT 10
G+ CVP T
Sbjct: 108 GVPSCVPAT 116


>sp|ADEC_METMA|ADENINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GIDECVPTT 10
G+ CVP T
Sbjct: 108 GVPSCVPAT 116


>sp|HEM1_CENSY|GLUTAMYL-TRNA reductase|Cenarchaeum symbiosum (strain A)

Query: 2 GIDECV 7
G+DECV
Sbjct: 40 GLDECV 45


>sp|RL18_SACS2|LARGE ribosomal subunit protein uL18|Saccharolobus solfataricus (strain

Query: 1 RGIDECV 7
RG+ ECV
Sbjct: 100 RGVTECV 106


>sp|HDRC_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 2 GIDECVPTT 10
G+DE PTT
Sbjct: 150 GLDEVPPTT 158


>sp|QUEC_METS3|7-CYANO-7-DEAZAGUANINE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 GIDECVPT 9
G+D CV T
Sbjct: 13 GLDSCVAT 20




83|SequenceR|420|411|YTLLSRGIDE

>sp|Y2423_ARCFU|UNCHARACTERIZED protein AF_2423|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LLSRGIDE 10
LLSRG++E
Sbjct: 195 LLSRGVEE 202


>sp|IF6_SACS2|TRANSLATION initiation factor 6|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YTLLSRGID 9
YT++ RG+D
Sbjct: 24 YTIIPRGLD 32


>sp|Y034_METJA|IRON-SULFUR cluster assembly SufBD family|Methanocaldococcus jannaschii (strain

Query: 2 TLLSRGIDE 10
TL+++G+DE
Sbjct: 293 TLMAKGLDE 301


>sp|IF6_SACI7|TRANSLATION initiation factor 6|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 YTLLSRGID 9
YT++ RG+D
Sbjct: 24 YTVVPRGLD 32


>sp|IF6_SACI6|TRANSLATION initiation factor 6|Saccharolobus islandicus (strain M.16.4 /

Query: 1 YTLLSRGID 9
YT++ RG+D
Sbjct: 24 YTVVPRGLD 32


>sp|IF6_SACI4|TRANSLATION initiation factor 6|Saccharolobus islandicus (strain M.14.25 /

Query: 1 YTLLSRGID 9
YT++ RG+D
Sbjct: 24 YTVVPRGLD 32


>sp|IF6_SACI3|TRANSLATION initiation factor 6|Saccharolobus islandicus (strain M.16.27)

Query: 1 YTLLSRGID 9
YT++ RG+D
Sbjct: 24 YTVVPRGLD 32


>sp|IF6_SACI2|TRANSLATION initiation factor 6|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 YTLLSRGID 9
YT++ RG+D
Sbjct: 24 YTVVPRGLD 32


>sp|IF6_SACI1|TRANSLATION initiation factor 6|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 YTLLSRGID 9
YT++ RG+D
Sbjct: 24 YTVVPRGLD 32


>sp|G1PDH_HALLT|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 YTLLSRGIDE 10
YT+L GI+E
Sbjct: 326 YTILQGGINE 335


>sp|THYX_AERPE|FLAVIN-DEPENDENT thymidylate synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 YTLLSRG 7
Y+LLSRG
Sbjct: 192 YSLLSRG 198


>sp|EPDA_METMP|MINOR structural pilin EpdA|Methanococcus maripaludis (strain DSM 14266

Query: 1 YTLLSRGID 9
YT+ S+GID
Sbjct: 109 YTIESQGID 117


>sp|QUEC_METAC|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TLLSRGID 9
TLLS G+D
Sbjct: 5 TLLSSGLD 12


>sp|QUEC_METMA|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TLLSRGID 9
TLLS G+D
Sbjct: 5 TLLSSGLD 12


>sp|QUEC_METBF|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 TLLSRGID 9
TLLS G+D
Sbjct: 5 TLLSSGLD 12


>sp|THIM_PYRHO|HYDROXYETHYLTHIAZOLE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LLSRGID 9
+LSRG+D
Sbjct: 109 ILSRGVD 115


>sp|GATD_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Sulfolobus acidocaldarius (strain ATCC

Query: 1 YTLLSRGI 8
YTL+ RG+
Sbjct: 244 YTLVHRGV 251


>sp|GATD_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Sulfurisphaera tokodaii (strain DSM

Query: 1 YTLLSRGI 8
YTL+ RG+
Sbjct: 246 YTLVHRGV 253


>sp|RS6E_NITMS|SMALL ribosomal subunit protein eS6|Nitrosopumilus maritimus (strain

Query: 1 YTLLSRGI 8
Y LLS+G+
Sbjct: 72 YVLLSKGV 79


>sp|ALBA_IGNH4|DNA/RNA-BINDING protein Alba|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 TLLSRGID 9
TLL++G+D
Sbjct: 27 TLLNQGVD 34


>sp|APGM2_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YTLLSRGIDE 10
+TL RG DE
Sbjct: 342 FTLYGRGRDE 351




84|SequenceR|425|416|PIRRGYTLLS

>sp|OTC_METKA|ORNITHINE carbamoyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 PIRRGYTL 8
PI+RGY L
Sbjct: 273 PIQRGYEL 280


>sp|CFBC_METAC|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina acetivorans

Query: 1 PIRRGY 6
P+R+GY
Sbjct: 138 PVRKGY 143


>sp|RIFK_METMJ|RIBOFLAVIN kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PIRRGYTL 8
P +RGYTL
Sbjct: 88 PDQRGYTL 95


>sp|GRPE_THEVO|PROTEIN GrpE|Thermoplasma volcanium (strain ATCC 51530

Query: 2 IRRGYTL 8
++RGYTL
Sbjct: 155 VQRGYTL 161


>sp|RFCL_METTP|REPLICATION factor C large subunit|Methanothrix thermoacetophila (strain DSM

Query: 2 IRRGYT 7
+RRGYT
Sbjct: 319 VRRGYT 324


>sp|GRPE_THEAC|PROTEIN GrpE|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IRRGYTL 8
++RGYTL
Sbjct: 154 VQRGYTL 160


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IRRGYTLLS 10
+RRGY L S
Sbjct: 1176 LRRGYVLES 1184


>sp|GCSPA_METS5|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Metallosphaera

Query: 3 RRGYTLL 9
RRG+TL+
Sbjct: 310 RRGFTLI 316




85|SequenceR|430|421|EWEALPIRRG

>sp|SYFA_METMJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 EWEALPIRR 9
EW++LP+RR
Sbjct: 198 EWKSLPLRR 206


>sp|SYFA_METLZ|PHENYLALANINE--TRNA ligase alpha subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 EWEALPIRR 9
EW++LP+R+
Sbjct: 193 EWKSLPLRK 201


>sp|RL5_PYRFU|LARGE ribosomal subunit protein uL5|Pyrococcus furiosus (strain ATCC

Query: 1 EWEALPIRR 9
+WEA P+RR
Sbjct: 14 DWEAHPMRR 22


>sp|GCSPA_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 1 EWEALPIRRG 10
EW++LPI G
Sbjct: 43 EWDSLPIGEG 52


>sp|RL5_PYRHO|LARGE ribosomal subunit protein uL5|Pyrococcus horikoshii (strain ATCC

Query: 1 EWEALPIRR 9
+WEA P+RR
Sbjct: 14 DWEAHPMRR 22


>sp|Y3523_METJA|UNCHARACTERIZED protein MJECL23|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EWEALPIR 8
EW+ LPI+
Sbjct: 315 EWDELPIQ 322


>sp|RL5_THEKO|LARGE ribosomal subunit protein uL5|Thermococcus kodakarensis (strain

Query: 1 EWEALPIRR 9
+WEA P+R+
Sbjct: 11 DWEAHPMRK 19


>sp|RL5_PYRAB|LARGE ribosomal subunit protein uL5|Pyrococcus abyssi (strain GE5 /

Query: 1 EWEALPIRR 9
+WEA P+R+
Sbjct: 14 DWEAHPMRK 22


>sp|CBID_THEAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 EALPIRRG 10
+ LP+RRG
Sbjct: 108 DGLPVRRG 115


>sp|DGGGP_SULTO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EWEALPIR 8
EW+ +PI+
Sbjct: 31 EWKIVPIK 38


>sp|RL24_PYRIL|LARGE ribosomal subunit protein uL24|Pyrobaculum islandicum (strain DSM

Query: 5 LPIRRG 10
LP+RRG
Sbjct: 45 LPVRRG 50


>sp|HBCL2_METS5|4-HYDROXYBUTYRATE--COA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 EWEALPI 7
EW++LP+
Sbjct: 349 EWDSLPL 355


>sp|RL24_METKA|LARGE ribosomal subunit protein uL24|Methanopyrus kandleri (strain AV19

Query: 4 ALPIRRG 10
+LP+RRG
Sbjct: 44 SLPVRRG 50


>sp|RL24_PYRAR|LARGE ribosomal subunit protein uL24|Pyrobaculum arsenaticum (strain

Query: 5 LPIRRG 10
LP+RRG
Sbjct: 45 LPVRRG 50


>sp|RS5_SACI1|SMALL ribosomal subunit protein uS5|Saccharolobus islandicus (strain

Query: 5 LPIRRG 10
LP+RRG
Sbjct: 115 LPVRRG 120


>sp|RL24_PYRAE|LARGE ribosomal subunit protein uL24|Pyrobaculum aerophilum (strain

Query: 5 LPIRRG 10
LP+RRG
Sbjct: 45 LPVRRG 50


>sp|RL24_PYRCJ|LARGE ribosomal subunit protein uL24|Pyrobaculum calidifontis (strain

Query: 5 LPIRRG 10
LP+RRG
Sbjct: 45 LPVRRG 50


>sp|HIS4_METHJ|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanospirillum hungatei JF-1

Query: 1 EWEALPIRRG 10
EW L IR+G
Sbjct: 149 EWADLFIRKG 158


>sp|LACC_HALVD|LACCASE volcanii (strain ATCC 29605

Query: 2 WEALPIRRG 10
W+ LP+ +G
Sbjct: 177 WQELPMEQG 185


>sp|RL5_METKA|LARGE ribosomal subunit protein uL5|Methanopyrus kandleri (strain AV19

Query: 1 EWEALPIRR 9
+WE+ P+R+
Sbjct: 15 DWESNPMRK 23




86|SequenceR|435|426|EAIRSEWEAL

>sp|ATGT_KORCO|TRNA-GUANINE(15) transglycosylase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 EAIRSEW 7
EAIR EW
Sbjct: 320 EAIRGEW 326


>sp|RL15E_THEAC|LARGE ribosomal subunit protein eL15|Thermoplasma acidophilum (strain

Query: 1 EAIRSEWEAL 10
+A+R EW++L
Sbjct: 8 QAVREEWKSL 17


>sp|PHP_SACS2|ARYLDIALKYLPHOSPHATASE solfataricus (strain ATCC 35092

Query: 1 EAIRSEWEAL 10
EA+R +W L
Sbjct: 30 EAVRQQWPHL 39


>sp|RL5_THEKO|LARGE ribosomal subunit protein uL5|Thermococcus kodakarensis (strain

Query: 1 EAIRSEWEA 9
EAI ++WEA
Sbjct: 6 EAILADWEA 14


>sp|HOSA_PYRHO|HOMOCITRATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EAIRSEWEAL 10
+ R+EWE L
Sbjct: 133 DTTRTEWENL 142


>sp|DNAK_METBU|CHAPERONE protein DnaK|Methanococcoides burtonii (strain DSM 6242

Query: 1 EAIRSEWEAL 10
EAI+S+ EAL
Sbjct: 556 EAIKSKTEAL 565


>sp|URED_NATPD|UREASE accessory protein UreD|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EAIRSEWEA 9
+A+R W+A
Sbjct: 275 DAVRDAWDA 283


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 2 AIRSEWE 8
AIR+EW+
Sbjct: 750 AIRNEWK 756


>sp|MTD_METHJ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanospirillum

Query: 4 RSEWEAL 10
+ EWEAL
Sbjct: 100 KEEWEAL 106


>sp|SYE_HALMA|GLUTAMATE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 EAIRSEWEAL 10
E RSE+EA+
Sbjct: 229 ETTRSEFEAM 238


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 EAIRSEWEAL 10
EA+R +W L
Sbjct: 642 EAVRGDWSEL 651


>sp|AROD_METMP|3-DEHYDROQUINATE dehydratase|Methanococcus maripaludis (strain DSM 14266

Query: 2 AIRSEWEA 9
IR+EWE
Sbjct: 54 TIRAEWEG 61


>sp|AROD_METM6|3-DEHYDROQUINATE dehydratase|Methanococcus maripaludis (strain C6 /

Query: 2 AIRSEWEA 9
IR+EWE
Sbjct: 54 TIRAEWEG 61


>sp|ARCA_HALS3|ARGININE deiminase|Halobacterium salinarum (strain ATCC 29341

Query: 4 RSEWEAL 10
R+ WEAL
Sbjct: 205 RASWEAL 211


>sp|AROD_METM7|3-DEHYDROQUINATE dehydratase|Methanococcus maripaludis (strain C7 /

Query: 2 AIRSEWEA 9
IR+EWE
Sbjct: 54 TIRAEWEG 61


>sp|AROD_METM5|3-DEHYDROQUINATE dehydratase|Methanococcus maripaludis (strain C5 /

Query: 2 AIRSEWEA 9
IR+EWE
Sbjct: 54 TIRAEWEG 61


>sp|Y1357_HALVD|PUTATIVE transcriptional regulator HVO_1357|Haloferax volcanii (strain ATCC

Query: 1 EAIRSEWEA 9
EA+R+E EA
Sbjct: 173 EAVRAEHEA 181


>sp|ARLY_SULAC|ARGININOSUCCINATE lyase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EAIRSEWEAL 10
E + + WEAL
Sbjct: 163 EELNTPWEAL 172


>sp|LEU1_PYRAB|2-ISOPROPYLMALATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 EAIRSEWEAL 10
+A RS+W+ L
Sbjct: 141 DATRSDWDFL 150




87|SequenceR|440|431|VSADVEAIRS

>sp|SECF_METKA|PROTEIN-EXPORT membrane protein SecF|Methanopyrus kandleri (strain AV19 /

Query: 3 ADVEAIRS 10
+DVEAIRS
Sbjct: 68 SDVEAIRS 75


>sp|RPO1C_HALMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Haloarcula marismortui (strain ATCC

Query: 1 VSADVEAI 8
VSAD+EA+
Sbjct: 6 VSADIEAV 13


>sp|HTR2_NATPH|SENSORY rhodopsin II transducer|Natronomonas pharaonis (Natronobacterium

Query: 1 VSADVEAIRS 10
VS D EA+R+
Sbjct: 219 VSEDAEAVRA 228




88|SequenceR|445|436|CIERVVSADV

>sp|TRUA_ARCFU|TRNA pseudouridine synthase A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CIERVVSADV 10
C+ ++SAD+
Sbjct: 145 CVREIISADI 154


>sp|FPOH_METMA|F(420)H(2) dehydrogenase subunit H|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IERVVSADV 10
IER +SAD+
Sbjct: 41 IERKLSADI 49


>sp|CHEB_HALSA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Halobacterium

Query: 1 CIERVVSAD 9
+ERV SAD
Sbjct: 123 AVERVASAD 131


>sp|CHEB_HALS3|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Halobacterium

Query: 1 CIERVVSAD 9
+ERV SAD
Sbjct: 123 AVERVASAD 131


>sp|IF1A_SULTO|TRANSLATION initiation factor 1A|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 ERVVSADV 10
E+VVSAD+
Sbjct: 95 EQVVSADI 102




89|SequenceR|450|441|YIYKSCIERV

>sp|PYRG_PICTO|CTP synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 IYKSCIER 9
IYKS IER
Sbjct: 93 IYKSVIER 100


>sp|PYRF_SACS2|OROTIDINE 5'-phosphate decarboxylase|Saccharolobus solfataricus (strain

Query: 1 YIYKSCIERV 10
YI KS +ER+
Sbjct: 67 YIMKSIVERL 76


>sp|PYRG_PYRCJ|CTP synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 IYKSCIER 9
IYKS IE+
Sbjct: 94 IYKSVIEK 101


>sp|Y1739_ARCFU|UNCHARACTERIZED protein AF_1739|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YKSCIERV 10
Y+SC ER+
Sbjct: 50 YESCAERL 57




90|SequenceR|455|446|APCQDYIYKS

>sp|RF12_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 2 PCQDYIYK 9
P DYIY+
Sbjct: 114 PVADYIYR 121


>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 PCQDYIY 8
PC+DY +
Sbjct: 44 PCEDYSF 50


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 APCQDY 6
+PCQ+Y
Sbjct: 39 SPCQEY 44


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PCQDYIY 8
PC+DY +
Sbjct: 44 PCEDYQF 50


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 PCQDYIY 8
PC+DY +
Sbjct: 44 PCEDYQF 50


>sp|MT872_AERPE|DNA (cytosine-5-)-methyltransferase M.ApeKI|Aeropyrum pernix (strain

Query: 2 PCQDY 6
PCQD+
Sbjct: 92 PCQDF 96


>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 PCQDYIY 8
PC DY +
Sbjct: 44 PCSDYYF 50


>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 PCQDYIY 8
PC DY +
Sbjct: 44 PCTDYYF 50


>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 PCQDYIY 8
PC DY +
Sbjct: 44 PCTDYYF 50


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PCQDYIY 8
PC DY +
Sbjct: 44 PCTDYYF 50


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 PCQDYIY 8
PC DY +
Sbjct: 44 PCTDYYF 50


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 PCQDYIY 8
PC DY +
Sbjct: 44 PCTDYYF 50


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 PCQDYIY 8
PC DY +
Sbjct: 44 PCTDYYF 50


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PCQDYIY 8
PC DY +
Sbjct: 44 PCTDYYF 50


>sp|Y1359_METJA|UPF0273 protein MJ1359|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CQDYIYK 9
CQ ++YK
Sbjct: 39 CQQFLYK 45


>sp|SYA_SULAC|ALANINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PCQDYIY 8
PC DY +
Sbjct: 45 PCTDYYF 51


>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PCQDYIY 8
PC DY +
Sbjct: 45 PCTDYYF 51


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 2 PCQDYIYKS 10
P +DY YK+
Sbjct: 693 PIKDYWYKT 701


>sp|SYE_METVS|GLUTAMATE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 4 QDYIYK 9
Q+YIYK
Sbjct: 300 QEYIYK 305


>sp|UVRC_METST|UVRABC system protein C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 APCQDYI 7
APC +YI
Sbjct: 168 APCVNYI 174




91|SequenceR|460|451|GYGAVAPCQD

>sp|RL10_METTL|LARGE ribosomal subunit protein uL10|Methanothermococcus

Query: 3 GAVAPC 8
GAVAPC
Sbjct: 120 GAVAPC 125


>sp|RL10_METM5|LARGE ribosomal subunit protein uL10|Methanococcus maripaludis (strain C5

Query: 3 GAVAPC 8
GAVAPC
Sbjct: 120 GAVAPC 125


>sp|RL10_METVS|LARGE ribosomal subunit protein uL10|Methanococcus vannielii (strain ATCC

Query: 3 GAVAPC 8
GA+APC
Sbjct: 120 GAIAPC 125


>sp|RL10_METMP|LARGE ribosomal subunit protein uL10|Methanococcus maripaludis (strain

Query: 3 GAVAPC 8
GA+APC
Sbjct: 120 GAIAPC 125


>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YGAVAP 7
YGAVAP
Sbjct: 580 YGAVAP 585


>sp|Y1383_THEVO|MEMO1 family protein TV1383|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GYGAVA 6
GYGA+A
Sbjct: 221 GYGAIA 226


>sp|Y237_THEAC|MEMO1 family protein Ta0237|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GYGAVA 6
GYGA+A
Sbjct: 221 GYGAIA 226


>sp|PRIS_AERPE|DNA primase small subunit PriS|Aeropyrum pernix (strain ATCC 700893

Query: 1 GYGAVA 6
GYGAVA
Sbjct: 322 GYGAVA 327


>sp|RL14_PICTO|LARGE ribosomal subunit protein uL14|Picrophilus torridus (strain ATCC

Query: 3 GAVAPCQD 10
GA+ PC D
Sbjct: 15 GALIPCVD 22




92|SequenceR|465|456|LQEIPGYGAV

>sp|Y1371_METJA|UNCHARACTERIZED methyltransferase MJ1371|Methanocaldococcus jannaschii (strain ATCC

Query: 3 EIPGYGAV 10
+IPGYGAV
Sbjct: 203 KIPGYGAV 210


>sp|PRIS_METMA|DNA primase small subunit PriS|Methanosarcina mazei (strain ATCC

Query: 1 LQEIPGYGAV 10
+QE+P Y AV
Sbjct: 385 IQEVPEYAAV 394


>sp|PRIS_METBF|DNA primase small subunit PriS|Methanosarcina barkeri (strain Fusaro /

Query: 1 LQEIPGYGAV 10
+QE+P Y AV
Sbjct: 385 IQEVPEYAAV 394


>sp|PRIS_METAC|DNA primase small subunit PriS|Methanosarcina acetivorans (strain ATCC

Query: 1 LQEIPGYGAV 10
+QE+P Y AV
Sbjct: 385 IQEVPEYAAV 394


>sp|THI4_PYRHO|THIAMINE thiazole synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LQEIPGYGAV 10
L+EIPG GA+
Sbjct: 183 LKEIPGEGAM 192


>sp|KU_ARCFU|NON-HOMOLOGOUS end joining protein Ku|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EIPGYGAV 10
E+PG+GAV
Sbjct: 174 ELPGWGAV 181


>sp|DPO4_SULAC|DNA polymerase IV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LQEIPGYGAV 10
+ EIPG G+V
Sbjct: 181 IDEIPGIGSV 190


>sp|DPO4_SACSO|DNA polymerase IV|Saccharolobus solfataricus (Sulfolobus solfataricus)

Query: 1 LQEIPGYGAV 10
+ EIPG G+V
Sbjct: 181 IDEIPGIGSV 190


>sp|GATE_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma volcanium (strain ATCC

Query: 3 EIPGYG 8
E+PGYG
Sbjct: 338 ELPGYG 343


>sp|GATE_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma acidophilum (strain ATCC

Query: 3 EIPGYG 8
E+PGYG
Sbjct: 335 ELPGYG 340


>sp|COFG_METMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 QEIPGYGAV 10
+E+PGYG +
Sbjct: 65 EEVPGYGEM 73


>sp|GATE_CALMQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Caldivirga maquilingensis (strain ATCC

Query: 3 EIPGYG 8
E+PGYG
Sbjct: 353 ELPGYG 358


>sp|PRIS_METBU|DNA primase small subunit PriS|Methanococcoides burtonii (strain DSM

Query: 1 LQEIPGYGAV 10
+QE+P Y A+
Sbjct: 369 VQELPEYAAI 378


>sp|Y1080_SULTO|UPF0145 protein STK_10800|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 QEIPGYGAV 10
QE+PGY V
Sbjct: 14 QELPGYKIV 22


>sp|APGM2_METJA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanocaldococcus jannaschii (strain

Query: 1 LQEIPGYGAV 10
L+E PG G +
Sbjct: 68 LEEFPGRGVI 77


>sp|PURL_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus kodakarensis (strain ATCC

Query: 1 LQEIPGYG 8
L++IPG+G
Sbjct: 535 LEKIPGFG 542


>sp|GATE_PYRCJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum calidifontis (strain DSM

Query: 3 EIPGYG 8
E+PGYG
Sbjct: 348 ELPGYG 353


>sp|SRP54_SACI1|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 LQEIPGYGAV 10
LQ IPG G +
Sbjct: 349 LQHIPGLGVM 358


>sp|PYRK_THEVO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermoplasma volcanium

Query: 4 IPGYGAV 10
IPGYG +
Sbjct: 37 IPGYGEI 43


>sp|GATE_PYRAR|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum arsenaticum (strain DSM

Query: 3 EIPGYG 8
E+PGYG
Sbjct: 348 ELPGYG 353


>sp|GATE_PYRNV|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum neutrophilum (strain DSM

Query: 3 EIPGYG 8
E+PGYG
Sbjct: 348 ELPGYG 353


>sp|SRP54_SACI6|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain M.16.4

Query: 1 LQEIPGYGAV 10
LQ IPG G +
Sbjct: 349 LQHIPGLGVM 358


>sp|SRP54_SACI4|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 LQEIPGYGAV 10
LQ IPG G +
Sbjct: 349 LQHIPGLGVM 358


>sp|SRP54_SACI3|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 LQEIPGYGAV 10
LQ IPG G +
Sbjct: 349 LQHIPGLGVM 358


>sp|SRP54_SACI2|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 LQEIPGYGAV 10
LQ IPG G +
Sbjct: 349 LQHIPGLGVM 358


>sp|SRP54_SACI7|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 LQEIPGYGAV 10
LQ IPG G +
Sbjct: 349 LQHIPGLGVM 358


>sp|GATE_PYRIL|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum islandicum (strain DSM 4184

Query: 3 EIPGYG 8
E+PGYG
Sbjct: 348 ELPGYG 353


>sp|GATE_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum aerophilum (strain ATCC

Query: 3 EIPGYG 8
E+PGYG
Sbjct: 348 ELPGYG 353


>sp|SRP54_SACS2|SIGNAL recognition particle 54 kDa|Saccharolobus solfataricus (strain ATCC

Query: 1 LQEIPGYG 8
LQ IPG G
Sbjct: 349 LQHIPGLG 356


>sp|MIG_AERPE|THYMINE-DNA glycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LQEIPGYG 8
L+E+PG G
Sbjct: 118 LKELPGVG 125


>sp|GATE_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Aeropyrum pernix (strain ATCC 700893

Query: 2 QEIPGYG 8
E+PGYG
Sbjct: 352 DELPGYG 358


>sp|RADA_METMJ|DNA repair and recombination protein|Methanoculleus marisnigri

Query: 1 LQEIPGYGA 9
L+++PG GA
Sbjct: 6 LEDLPGVGA 14


>sp|RADA_HALSA|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 1 LQEIPGYG 8
L+E+PG G
Sbjct: 6 LEELPGVG 13


>sp|RADA_HALS3|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 1 LQEIPGYG 8
L+E+PG G
Sbjct: 6 LEELPGVG 13


>sp|DLDH3_HALMA|DIHYDROLIPOYL dehydrogenase 3|Haloarcula marismortui (strain ATCC 43049

Query: 3 EIPGYG 8
EIPG+G
Sbjct: 155 EIPGFG 160


>sp|Y564_METTH|UNCHARACTERIZED protein MTH_564|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LQEIPGYGAV 10
++EIPG G V
Sbjct: 156 VREIPGVGYV 165


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LQEIPGYG 8
L +PGYG
Sbjct: 352 LINVPGYG 359


>sp|DPO4_SULTO|DNA polymerase IV|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LQEIPGYGAV 10
+ E+PG G V
Sbjct: 180 IDEVPGVGNV 189


>sp|HELS_AERPE|ATP-DEPENDENT DNA helicase Hel308|Aeropyrum pernix (strain ATCC 700893

Query: 1 LQEIPGYGAV 10
L EIPG G V
Sbjct: 649 LVEIPGVGRV 658


>sp|Y1682_PYRHO|UPF0145 protein PH1682|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 EIPGYGAV 10
EIPGY V
Sbjct: 17 EIPGYKVV 24


>sp|Y1196_METJA|PUTATIVE amino-acid transporter MJ1196|Methanocaldococcus jannaschii (strain

Query: 2 QEIPGYGAV 10
+EIP YG +
Sbjct: 289 KEIPYYGVI 297


>sp|RADA_METBF|DNA repair and recombination protein|Methanosarcina barkeri (strain

Query: 1 LQEIPGYG 8
L+E+PG G
Sbjct: 6 LEELPGVG 13


>sp|RADA_METAC|DNA repair and recombination protein|Methanosarcina acetivorans

Query: 1 LQEIPGYG 8
L+E+PG G
Sbjct: 6 LEELPGVG 13


>sp|SYE_THEPD|GLUTAMATE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 LQEIPGYG 8
++EI GYG
Sbjct: 528 IEEISGYG 535


>sp|RADA_METMA|DNA repair and recombination protein|Methanosarcina mazei (strain

Query: 1 LQEIPGYG 8
L+E+PG G
Sbjct: 6 LEELPGVG 13


>sp|RADA_METLZ|DNA repair and recombination protein|Methanocorpusculum labreanum

Query: 1 LQEIPGYG 8
++EIPG G
Sbjct: 6 IEEIPGVG 13


>sp|THI4_PYRFU|THIAMINE thiazole synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LQEIPGYGAV 10
+++IPG GA+
Sbjct: 183 IEKIPGEGAM 192


>sp|RADA_ARCFU|DNA repair and recombination protein|Archaeoglobus fulgidus (strain

Query: 1 LQEIPGYG 8
L++IPG G
Sbjct: 14 LEDIPGVG 21


>sp|IXTPA_METKA|DITP/XTP pyrophosphatase|Methanopyrus kandleri (strain AV19 /

Query: 1 LQEIPGYGA 9
L+EI YGA
Sbjct: 42 LEEIAAYGA 50




93|SequenceR|470|461|RNYDPLQEIP

>sp|RL2_METHJ|LARGE ribosomal subunit protein uL2|Methanospirillum hungatei JF-1

Query: 2 NYDPLQEIP 10
N PLQEIP
Sbjct: 92 NTLPLQEIP 100


>sp|RS12_AERPE|SMALL ribosomal subunit protein uS12|Aeropyrum pernix (strain ATCC

Query: 1 RNYDPLQEIP 10
R YDPL+ P
Sbjct: 39 RKYDPLEGAP 48


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 NYDPLQEIP 10
+YDPL+++P
Sbjct: 66 DYDPLRKVP 74


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 NYDPLQEI 9
NYDPL+++
Sbjct: 67 NYDPLRKV 74


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 2 NYDPLQEI 9
NYDPL+++
Sbjct: 67 NYDPLRKV 74


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 NYDPLQEI 9
NYDPL+++
Sbjct: 63 NYDPLRKV 70


>sp|IDI2_METJA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NYDPLQEI 9
+++PLQEI
Sbjct: 158 HFNPLQEI 165


>sp|LYSZ_PYRFU|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrococcus furiosus

Query: 3 YDPLQEIP 10
YDP++ P
Sbjct: 157 YDPIENTP 164


>sp|RS12_HYPBU|SMALL ribosomal subunit protein uS12|Hyperthermus butylicus (strain DSM

Query: 1 RNYDPLQEIP 10
+ YDPL+ P
Sbjct: 39 KKYDPLEGAP 48


>sp|YIH50_HALSA|UNCHARACTERIZED protein in transposable element|Halobacterium salinarum (strain

Query: 1 RNYDPLQE 8
R YDPL E
Sbjct: 209 RAYDPLDE 216


>sp|RMLC_METTH|DTDP-4-DEHYDRORHAMNOSE 3,5-epimerase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 RNYDPLQEIP 10
RN+ PL+E P
Sbjct: 173 RNWKPLRENP 182


>sp|Y1332_METJA|UNCHARACTERIZED GTP-binding protein MJ1332|Methanocaldococcus jannaschii (strain

Query: 2 NYDPLQEI 9
NYDP++++
Sbjct: 125 NYDPVEDV 132


>sp|RS12_PYRAR|SMALL ribosomal subunit protein uS12|Pyrobaculum arsenaticum (strain

Query: 3 YDPLQEIP 10
YDPL+ P
Sbjct: 41 YDPLEGAP 48


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RNYDPLQEIP 10
+N+DP ++P
Sbjct: 535 KNFDPETDVP 544


>sp|RS12_IGNH4|SMALL ribosomal subunit protein uS12|Ignicoccus hospitalis (strain

Query: 3 YDPLQEIP 10
YDPL+ P
Sbjct: 41 YDPLEGAP 48


>sp|SYK_METTH|LYSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 NYDPLQEIP 10
++DPL+++P
Sbjct: 85 DHDPLRKVP 93


>sp|RS8_PICTO|SMALL ribosomal subunit protein uS8|Picrophilus torridus (strain ATCC

Query: 2 NYDPLQEI 9
N+DPL ++
Sbjct: 2 NHDPLNDV 9


>sp|RS12_PYRCJ|SMALL ribosomal subunit protein uS12|Pyrobaculum calidifontis (strain

Query: 3 YDPLQEIP 10
YDPL+ P
Sbjct: 41 YDPLEGAP 48


>sp|RS12_PYRIL|SMALL ribosomal subunit protein uS12|Pyrobaculum islandicum (strain DSM

Query: 3 YDPLQEIP 10
YDPL+ P
Sbjct: 41 YDPLEGAP 48


>sp|RS12_PYRAE|SMALL ribosomal subunit protein uS12|Pyrobaculum aerophilum (strain

Query: 3 YDPLQEIP 10
YDPL+ P
Sbjct: 41 YDPLEGAP 48


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 RNYDPL 6
R+YDPL
Sbjct: 280 RSYDPL 285


>sp|RS12_METJA|SMALL ribosomal subunit protein uS12|Methanocaldococcus jannaschii

Query: 3 YDPLQEIP 10
YDPL+ P
Sbjct: 41 YDPLEGAP 48


>sp|PRIS_METS3|DNA primase small subunit PriS|Methanobrevibacter smithii (strain ATCC

Query: 3 YDPLQE 8
+DPLQE
Sbjct: 308 FDPLQE 313


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NYDPLQEI 9
N+DPL+++
Sbjct: 67 NFDPLRKV 74




94|SequenceR|480|466|FRLWFMGSRIRNYDP

>sp|GSA_METTH|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 FRLWFMGSRIRNY 13
F+L+F G +RNY
Sbjct: 348 FQLYFTGEEVRNY 360


>sp|RS4_METVS|SMALL ribosomal subunit protein uS4|Methanococcus vannielii (strain

Query: 3 LWFMGSRIRNY 13
LW M +++RNY
Sbjct: 41 LWKMETQLRNY 51


>sp|RS4_METMP|SMALL ribosomal subunit protein uS4|Methanococcus maripaludis (strain

Query: 3 LWFMGSRIRNY 13
LW M +++RNY
Sbjct: 41 LWKMETQLRNY 51


>sp|RS4_METM7|SMALL ribosomal subunit protein uS4|Methanococcus maripaludis (strain

Query: 3 LWFMGSRIRNY 13
LW M +++RNY
Sbjct: 41 LWKMETQLRNY 51


>sp|RS4_METM6|SMALL ribosomal subunit protein uS4|Methanococcus maripaludis (strain

Query: 3 LWFMGSRIRNY 13
LW M +++RNY
Sbjct: 41 LWKMETQLRNY 51


>sp|RS4_METM5|SMALL ribosomal subunit protein uS4|Methanococcus maripaludis (strain

Query: 3 LWFMGSRIRNY 13
LW M +++RNY
Sbjct: 41 LWKMETQLRNY 51


>sp|MTNA_SULAC|PUTATIVE methylthioribose-1-phosphate isomerase|Sulfolobus acidocaldarius

Query: 2 RLWFMGSRIRNYD 14
R W GSR+ Y+
Sbjct: 214 RPWLQGSRLTVYE 226


>sp|PGMI_THEAC|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Thermoplasma acidophilum

Query: 8 SRIRNYDP 15
+RIRN DP
Sbjct: 289 ARIRNVDP 296


>sp|Y1109_METTH|PUTATIVE nickel insertion protein|Methanothermobacter thermautotrophicus

Query: 1 FRLWFMGSRIRN 12
F++ MGSR+ N
Sbjct: 352 FKVGLMGSRVVN 363


>sp|DIPPS_THEKO|BIFUNCTIONAL IPC transferase and DIPP|Thermococcus kodakarensis (strain ATCC

Query: 2 RLWFMGSRIRNYD 14
++W +G R++ +D
Sbjct: 144 KVWKIGKRLKEWD 156


>sp|Y178_METBF|UPF0284 protein Mbar_A0178|Methanosarcina barkeri (strain Fusaro /

Query: 2 RLWFMGSRIRN 12
R F+G R+RN
Sbjct: 131 RAKFLGKRLRN 141


>sp|HELS_PYRFU|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RLWFMGSRIRNYDP 15
RL+F I YDP
Sbjct: 548 RLYFDDPYISGYDP 561


>sp|RL22_CALMQ|LARGE ribosomal subunit protein uL22|Caldivirga maquilingensis (strain

Query: 7 GSRIRNYDP 15
G RIRNY P
Sbjct: 135 GMRIRNYMP 143


>sp|Y584_METJA|UPF0718 protein MJ0584|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RLWFMGSRIRNY 13
++WF I+N+
Sbjct: 224 KIWFKDEEIKNW 235


>sp|THS2_HALVD|CHAPERONIN subunit CTT2|Haloferax volcanii (strain ATCC 29605

Query: 6 MGSRIRNY 13
+ SR+RNY
Sbjct: 419 LASRLRNY 426


>sp|RNP1_ARCFU|RIBONUCLEASE P protein component 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FRLWFMGSRIR 11
FR+W+ G +R
Sbjct: 63 FRVWYKGKIMR 73


>sp|TYSY_METBU|PUTATIVE thymidylate synthase|Methanococcoides burtonii (strain DSM 6242

Query: 7 GSRIRNYD 14
G R+RN+D
Sbjct: 92 GQRLRNWD 99


>sp|SURE_THEGJ|5'-NUCLEOTIDASE SurE|Thermococcus gammatolerans (strain DSM 15229

Query: 4 WFMGSRIRNYDP 15
W +G +++++P
Sbjct: 209 WIVGRLVQDFEP 220


>sp|SYT_HALWD|THREONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 RLWFMGSRIR 11
R W +G +IR
Sbjct: 571 RAWTLGRKIR 580


>sp|CDVA_SULAC|CELL division protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 FMGSRIRNYDP 15
F G I+ Y P
Sbjct: 44 FKGEEIKTYSP 54


>sp|Y2292_ARCFU|UNCHARACTERIZED protein AF_2292|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RLWFMGSRIRNY 13
RL+F G+ R+Y
Sbjct: 234 RLYFRGTSERDY 245


>sp|DHYS_METKA|PROBABLE deoxyhypusine synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 LWFMGSRIRN 12
LW MG R+ +
Sbjct: 146 LWEMGKRLES 155


>sp|RL24E_METS5|LARGE ribosomal subunit protein eL24|Metallosphaera sedula (strain ATCC

Query: 3 LWFMGSRIRNY 13
LWF ++ R Y
Sbjct: 30 LWFCSNKCRKY 40


>sp|CCA_METTH|CCA-ADDING enzyme|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 RLWFMGSRIRNYDP 15
R+W GSR+ P
Sbjct: 375 RVWVEGSRLTIESP 388


>sp|DHYS_PICTO|PROBABLE deoxyhypusine synthase|Picrophilus torridus (strain ATCC 700027

Query: 3 LWFMGSRIRN 12
+W +G RI N
Sbjct: 162 IWELGKRINN 171


>sp|RNP2_METTH|RIBONUCLEASE P protein component 2|Methanothermobacter thermautotrophicus

Query: 1 FRLWFM 6
FRLW M
Sbjct: 50 FRLWLM 55


>sp|CCA_THEKO|CCA-ADDING enzyme|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RLWFMGSRI 10
R+W +G R+
Sbjct: 384 RVWLVGKRL 392


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FRLWFMGSRI 10
F WF+G R+
Sbjct: 72 FYKWFVGGRL 81


>sp|CBSA_SACS2|CYTOCHROME b558/566 subunit A|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LWFMGSRI 10
+W+MGS I
Sbjct: 231 MWYMGSVI 238


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 FRLWFMGSRI 10
F WF+G R+
Sbjct: 72 FYKWFVGGRL 81


>sp|FOR_THELN|TUNGSTEN-CONTAINING formaldehyde ferredoxin oxidoreductase|Thermococcus litoralis

Query: 4 WFMGSRIRNYDP 15
W + + +N DP
Sbjct: 40 WILWNEAKNVDP 51


>sp|RL24_NANEQ|LARGE ribosomal subunit protein uL24|Nanoarchaeum equitans (strain

Query: 9 RIRNYDP 15
+IRNY+P
Sbjct: 3 KIRNYNP 9




95|SequenceR|480|471|FRLWFMGSRI

>sp|Y1109_METTH|PUTATIVE nickel insertion protein|Methanothermobacter thermautotrophicus

Query: 1 FRLWFMGSRI 10
F++ MGSR+
Sbjct: 352 FKVGLMGSRV 361


>sp|MTNA_SULAC|PUTATIVE methylthioribose-1-phosphate isomerase|Sulfolobus acidocaldarius

Query: 2 RLWFMGSRI 10
R W GSR+
Sbjct: 214 RPWLQGSRL 222


>sp|CCA_METTH|CCA-ADDING enzyme|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 RLWFMGSRI 10
R+W GSR+
Sbjct: 375 RVWVEGSRL 383


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 FRLWFMGSR 9
FR W G+R
Sbjct: 442 FRTWVEGAR 450


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FRLWFMGSR 9
FR W G+R
Sbjct: 442 FRTWVEGAR 450


>sp|CCA_THEKO|CCA-ADDING enzyme|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RLWFMGSRI 10
R+W +G R+
Sbjct: 384 RVWLVGKRL 392


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FRLWFMGSR 9
FR W G+R
Sbjct: 442 FRTWVEGAR 450


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FRLWFMGSRI 10
F WF+G R+
Sbjct: 72 FYKWFVGGRL 81


>sp|CBSA_SACS2|CYTOCHROME b558/566 subunit A|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LWFMGSRI 10
+W+MGS I
Sbjct: 231 MWYMGSVI 238


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 FRLWFMGSRI 10
F WF+G R+
Sbjct: 72 FYKWFVGGRL 81


>sp|DHYS_METKA|PROBABLE deoxyhypusine synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 LWFMGSRI 10
LW MG R+
Sbjct: 146 LWEMGKRL 153


>sp|RNP1_ARCFU|RIBONUCLEASE P protein component 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FRLWFMGS 8
FR+W+ G
Sbjct: 63 FRVWYKGK 70


>sp|RNP2_METTH|RIBONUCLEASE P protein component 2|Methanothermobacter thermautotrophicus

Query: 1 FRLWFM 6
FRLW M
Sbjct: 50 FRLWLM 55




THE END