NLRP3_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|LKCRTSAMKM

>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KCRTSAMK 9
KCRTS K
Sbjct: 173 KCRTSLAK 180


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 KCRTSAMK 9
KCRTS K
Sbjct: 173 KCRTSLAK 180




2|SequenceR|15|6|ELYRALKCRT

>sp|FAEHP_METPE|BIFUNCTIONAL enzyme Fae/Hps|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 ELYRALKCRT 10
EL+RA+ C T
Sbjct: 304 ELHRAIDCET 313


>sp|RL21_METMP|LARGE ribosomal subunit protein eL21|Methanococcus maripaludis (strain

Query: 2 LYRALKCRT 10
L RALKC T
Sbjct: 27 LTRALKCYT 35


>sp|RL21_METVS|LARGE ribosomal subunit protein eL21|Methanococcus vannielii (strain

Query: 2 LYRALKCRT 10
L RALKC T
Sbjct: 27 LTRALKCYT 35


>sp|RL21_METM5|LARGE ribosomal subunit protein eL21|Methanococcus maripaludis (strain

Query: 2 LYRALKCRT 10
L RALKC T
Sbjct: 27 LTRALKCYT 35


>sp|RL21_METM7|LARGE ribosomal subunit protein eL21|Methanococcus maripaludis (strain

Query: 2 LYRALKCRT 10
L RALKC T
Sbjct: 27 LTRALKCYT 35


>sp|RL21_METM6|LARGE ribosomal subunit protein eL21|Methanococcus maripaludis (strain

Query: 2 LYRALKCRT 10
L RALKC T
Sbjct: 27 LTRALKCYT 35




3|SequenceR|20|11|VDELDELYRA

>sp|NIFH2_METIV|NITROGENASE iron protein 2|Methanobacterium ivanovii

Query: 1 VDELDELYRA 10
VDE DE +R
Sbjct: 252 VDEFDEFFRG 261


>sp|PTH_METTH|PEPTIDYL-TRNA hydrolase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 VDELDELYRA 10
+DEL E+YRA
Sbjct: 56 LDELLEIYRA 65


>sp|RPO1C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanothermobacter thermautotrophicus

Query: 2 DELDELYRA 10
DELDEL R
Sbjct: 108 DELDELVRG 116


>sp|RPO1C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanothermobacter thermautotrophicus

Query: 2 DELDELYR 9
DELDEL R
Sbjct: 108 DELDELIR 115


>sp|PMDHL_AERPE|PHOSPHOMEVALONATE dehydratase large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 VDELDELYRA 10
++EL LYRA
Sbjct: 302 IEELRRLYRA 311


>sp|PANB_HALMA|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 2 DELDELY 8
DELD+LY
Sbjct: 263 DELDDLY 269


>sp|CHEA_HALS3|CHEMOTAXIS protein CheA|Halobacterium salinarum (strain ATCC 29341

Query: 1 VDELDELY 8
VD+LDEL+
Sbjct: 301 VDQLDELH 308


>sp|HISX_ARCFU|HISTIDINOL dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VDELDELYRA 10
+ E DE+Y+A
Sbjct: 163 IAEFDEVYKA 172


>sp|Y1824_METAR|DNA-BINDING protein UNCMA_18240|Methanocella arvoryzae (strain DSM 22066

Query: 2 DELDELYR 9
DELDE+ R
Sbjct: 6 DELDEIRR 13


>sp|PRIL_PYRFU|DNA primase large subunit PriL|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DELDELYR 9
DEL E YR
Sbjct: 190 DELPEFYR 197


>sp|Y1441_METTH|UPF0285 protein MTH_1441|Methanothermobacter thermautotrophicus (strain

Query: 2 DELDELYRA 10
+EL E+YRA
Sbjct: 230 EELLEMYRA 238


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 1 VDELDELYR 9
VDE+ ++YR
Sbjct: 21 VDEVKKIYR 29


>sp|Y204_PICTO|DNA-BINDING protein PTO0204|Picrophilus torridus (strain ATCC 700027

Query: 2 DELDELYR 9
DELDE+ R
Sbjct: 5 DELDEIRR 12


>sp|PRIL_PYRHO|DNA primase large subunit PriL|Pyrococcus horikoshii (strain ATCC

Query: 2 DELDELYR 9
DEL E YR
Sbjct: 190 DELPEFYR 197


>sp|RS9_SACS2|SMALL ribosomal subunit protein uS9|Saccharolobus solfataricus (strain

Query: 3 ELDELYRA 10
EL+++YRA
Sbjct: 98 ELEKIYRA 105




4|SequenceR|25|16|FKKLDVDELD

>sp|MTBB2_METAC|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina acetivorans (strain ATCC

Query: 2 KKLDVDELD 10
KKLDVD +D
Sbjct: 405 KKLDVDVMD 413


>sp|SYM_THEVO|METHIONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FKKLDVDEL 9
F+KLD+D+L
Sbjct: 533 FEKLDIDKL 541


>sp|MTBB1_METBF|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri (strain Fusaro /

Query: 2 KKLDVDELD 10
KKL VD++D
Sbjct: 405 KKLGVDQMD 413


>sp|MTBB3_METAC|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina acetivorans (strain ATCC

Query: 2 KKLDVDELD 10
KKL+VD +D
Sbjct: 405 KKLNVDTMD 413


>sp|PURA_HALMA|ADENYLOSUCCINATE synthetase|Haloarcula marismortui (strain ATCC 43049

Query: 4 LDVDELD 10
LDVDELD
Sbjct: 176 LDVDELD 182


>sp|Y253_METJA|PUTATIVE hydrogenase maturation protease MJ0253|Methanocaldococcus

Query: 1 FKKLDVDEL 9
KK+DVDEL
Sbjct: 77 IKKIDVDEL 85


>sp|Y258_PYRAB|UPF0273 protein PYRAB02580|Pyrococcus abyssi (strain GE5 /

Query: 3 KLDVDELD 10
+LD+DE+D
Sbjct: 193 RLDLDEID 200


>sp|Y1931_PYRFU|UPF0273 protein PF1931|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KLDVDELD 10
+LD+DE+D
Sbjct: 193 RLDLDEID 200


>sp|Y284_PYRHO|UPF0273 protein PH0284|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KLDVDELD 10
+LD+DE+D
Sbjct: 193 RLDLDEID 200


>sp|Y612_ARCFU|UNCHARACTERIZED protein AF_0612|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FKKLDVDELD 10
FKKL +DEL
Sbjct: 47 FKKLRLDELS 56


>sp|MTBB3_METBA|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina barkeri

Query: 2 KKLDVDELD 10
KKL VD++D
Sbjct: 357 KKLGVDKMD 365


>sp|MTBB2_METBF|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri (strain Fusaro /

Query: 2 KKLDVDELD 10
KKL VD++D
Sbjct: 405 KKLGVDKMD 413


>sp|MTBB2_METBA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri

Query: 2 KKLDVDELD 10
KKL VD++D
Sbjct: 357 KKLGVDKMD 365


>sp|MTBB1_METBA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri

Query: 2 KKLDVDELD 10
KKL VD++D
Sbjct: 405 KKLGVDKMD 413


>sp|RL22_SULTO|LARGE ribosomal subunit protein uL22|Sulfurisphaera tokodaii (strain

Query: 1 FKKLDVDE 8
+ KLD+DE
Sbjct: 6 YPKLDIDE 13


>sp|MUTS_METTP|DNA mismatch repair protein MutS|Methanothrix thermoacetophila (strain

Query: 2 KKLDVDELD 10
K+LD ELD
Sbjct: 382 KRLDASELD 390


>sp|MTBB1_METAC|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina acetivorans (strain ATCC

Query: 2 KKLDVDELD 10
KKL+VD +D
Sbjct: 405 KKLNVDVMD 413


>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain Fusaro

Query: 1 FKKLDVDEL 9
KKL+VDE+
Sbjct: 875 LKKLNVDEM 883


>sp|Y1590_THEKO|UPF0273 protein TK1590|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 KLDVDELD 10
+LD+DE+D
Sbjct: 193 RLDLDEID 200


>sp|RFCL_METHJ|REPLICATION factor C large subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 LDVDELD 10
LDVD+LD
Sbjct: 385 LDVDKLD 391


>sp|Y1505_AERPE|UPF0273 protein APE_1505.1|Aeropyrum pernix (strain ATCC 700893

Query: 3 KLDVDELD 10
+LD+DE+D
Sbjct: 193 RLDLDEVD 200


>sp|Y1359_METJA|UPF0273 protein MJ1359|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KLDVDELD 10
+LD+DE+D
Sbjct: 193 RLDLDEID 200


>sp|RL22_SACS2|LARGE ribosomal subunit protein uL22|Saccharolobus solfataricus (strain

Query: 1 FKKLDVDEL 9
+ +LDVDEL
Sbjct: 6 YPQLDVDEL 14


>sp|HEM11_PYRCJ|GLUTAMYL-TRNA reductase 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 KKLDVDEL 9
K+L VDEL
Sbjct: 14 KRLSVDEL 21


>sp|Y3143_PYRAE|UPF0273 protein PAE3143|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 KLDVDELD 10
+LD+DE D
Sbjct: 194 RLDLDEFD 201


>sp|FAU1_PYRAE|PROBABLE ribonuclease FAU-1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 KKLDVDELD 10
K LDVDE +
Sbjct: 403 KVLDVDEFE 411


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 4 LDVDELD 10
+DVDELD
Sbjct: 309 MDVDELD 315


>sp|AATI_METTH|A-TYPE ATP synthase subunit I|Methanothermobacter thermautotrophicus

Query: 1 FKKLDVDELD 10
F+K +V+ELD
Sbjct: 103 FEKREVEELD 112


>sp|TRPF_SACS2|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FKKLDVDEL 9
F KLDVD L
Sbjct: 18 FSKLDVDYL 26


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 4 LDVDELD 10
+DVDELD
Sbjct: 309 MDVDELD 315


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 4 LDVDELD 10
+DVDELD
Sbjct: 309 MDVDELD 315


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FKKLDVDE 8
FKKL +DE
Sbjct: 172 FKKLGIDE 179


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 4 LDVDELD 10
+DVDELD
Sbjct: 309 MDVDELD 315


>sp|DNLI2_METAC|DNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FKKLDVDEL 9
KK+DV+EL
Sbjct: 31 LKKVDVEEL 39


>sp|Y415_METJA|UNCHARACTERIZED protein MJ0415|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FKKLDVDEL 9
FK DVDE+
Sbjct: 89 FKNTDVDEV 97


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FKKLDVDEL 9
F++LD+DE+
Sbjct: 605 FEELDLDEI 613


>sp|DNLI2_METBF|DNA ligase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 FKKLDVDEL 9
KK+DV+EL
Sbjct: 31 LKKVDVEEL 39


>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 1 FKKLDVDEL 9
KK++VDE+
Sbjct: 875 LKKMNVDEM 883


>sp|GVPD1_HALSA|PROTEIN GvpD1|Halobacterium salinarum (strain ATCC 700922

Query: 1 FKKLDVDEL 9
F+KLD+D L
Sbjct: 108 FEKLDLDSL 116


>sp|DNLI2_METMA|DNA ligase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FKKLDVDEL 9
KK+DV+EL
Sbjct: 31 LKKVDVEEL 39


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 2 KKLDVDEL 9
++LDVDE+
Sbjct: 901 RRLDVDEI 908


>sp|Y092_METJA|UNCHARACTERIZED iron-sulfur protein MJ0092|Methanocaldococcus jannaschii (strain

Query: 1 FKKLDVD 7
F KLDVD
Sbjct: 325 FNKLDVD 331


>sp|Y360_CALMQ|PROTEIN Cmaq_0360|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 FKKLDVDELD 10
F LDV+EL+
Sbjct: 94 FAPLDVNELE 103




5|SequenceR|30|21|ELHMKFKKLD

>sp|SURE_METJA|5'-NUCLEOTIDASE SurE|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HMKFKKLD 10
H+KFK+LD
Sbjct: 137 HLKFKELD 144


>sp|DAPB_METMP|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ELHMKFKK 8
E+H KFKK
Sbjct: 158 EMHHKFKK 165


>sp|DAPB_METM7|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain C7 /

Query: 1 ELHMKFKK 8
E+H KFKK
Sbjct: 158 EMHHKFKK 165


>sp|DAPB_METM6|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain C6 /

Query: 1 ELHMKFKK 8
E+H KFKK
Sbjct: 158 EMHHKFKK 165


>sp|DAPB_META3|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 ELHMKFKK 8
E+H KFKK
Sbjct: 159 EMHHKFKK 166


>sp|DAPB_METM5|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain C5 /

Query: 1 ELHMKFKK 8
E+H KFKK
Sbjct: 158 EMHHKFKK 165


>sp|DAPB_METVS|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ELHMKFKK 8
E+H KFKK
Sbjct: 158 EMHHKFKK 165


>sp|LEU1_SACS2|2-ISOPROPYLMALATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ELHMKFK 7
ELHMK+K
Sbjct: 111 ELHMKYK 117


>sp|RL4_PYRAE|LARGE ribosomal subunit protein uL4|Pyrobaculum aerophilum (strain ATCC

Query: 1 ELHMKFKKLD 10
E+ +KFK+LD
Sbjct: 4 EVLLKFKQLD 13


>sp|LYSY_IGNH4|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 4 MKFKKLD 10
+KFK+LD
Sbjct: 58 LKFKRLD 64


>sp|AROA_METB6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanoregula boonei (strain DSM 21154

Query: 3 HMKFKKLD 10
H+KFK+ D
Sbjct: 333 HLKFKESD 340




6|SequenceR|35|26|QPPYDELHMK

>sp|CAPPA_METTH|PHOSPHOENOLPYRUVATE carboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 QPPYDELHMK 10
+P YDE HMK
Sbjct: 442 EPEYDEGHMK 451


>sp|GATE_PYRCJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum calidifontis (strain DSM

Query: 3 PYDELHM 9
P+DELH+
Sbjct: 110 PFDELHV 116


>sp|CDC6O_HALMA|ORC1-TYPE DNA replication protein 15|Haloarcula marismortui (strain ATCC

Query: 2 PPYDELHMK 10
PPYD +K
Sbjct: 206 PPYDATELK 214


>sp|EF1A_SULTO|ELONGATION factor 1-alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PPYDELHMK 10
PPYDE K
Sbjct: 159 PPYDEKRFK 167


>sp|EF1A_SACS2|ELONGATION factor 1-alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QPPYDELHMK 10
+PPYDE K
Sbjct: 158 EPPYDEKRYK 167


>sp|Y886_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0886|Methanocaldococcus

Query: 2 PPYDELHM 9
PPYD M
Sbjct: 52 PPYDRAKM 59


>sp|EF1A_METTP|ELONGATION factor 1-alpha|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 QPPYDE 6
+PPYDE
Sbjct: 152 EPPYDE 157


>sp|KHSE_THEGJ|HOMOSERINE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 PYDELHMK 10
PYDEL +
Sbjct: 26 PYDELSFR 33


>sp|CDC6A_HALSA|ORC1-TYPE DNA replication protein 10|Halobacterium salinarum (strain ATCC

Query: 2 PPYDELHM 9
PPYD L +
Sbjct: 209 PPYDALEL 216


>sp|GSA_METKA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanopyrus kandleri (strain AV19 /

Query: 3 PYDELHMK 10
PYDEL K
Sbjct: 323 PYDELSSK 330


>sp|EF1A_METS5|ELONGATION factor 1-alpha|Metallosphaera sedula (strain ATCC 51363

Query: 1 QPPYDE 6
+PPYD+
Sbjct: 158 EPPYDQ 163


>sp|CAS1_THEPD|CRISPR-ASSOCIATED endonuclease Cas1|Thermofilum pendens (strain DSM 2475

Query: 1 QPPYDELHMK 10
+ PY ++H+K
Sbjct: 288 KTPYQQIHLK 297


>sp|EF1A_PICTO|ELONGATION factor 1-alpha|Picrophilus torridus (strain ATCC 700027

Query: 1 QPPYDE 6
QPPY E
Sbjct: 154 QPPYSE 159


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 QPPYDEL 7
+PPYD L
Sbjct: 272 EPPYDVL 278


>sp|CDC6_PYRAB|ORC1-TYPE DNA replication protein|Pyrococcus abyssi (strain GE5 /

Query: 2 PPYDELHMK 10
PPYD +K
Sbjct: 218 PPYDANQLK 226


>sp|GSA_METAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocella arvoryzae (strain DSM 22066

Query: 1 QPPYDELH 8
Q PY+++H
Sbjct: 177 QVPYNDIH 184




7|SequenceR|40|31|PICGKQPPYD

>sp|HYPA_METMA|HYDROGENASE maturation factor HypA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PICGKQ 6
P+CGKQ
Sbjct: 106 PVCGKQ 111


>sp|PMDHL_METTH|PHOSPHOMEVALONATE dehydratase large subunit|Methanothermobacter thermautotrophicus

Query: 2 ICGKQPPY 9
ICGK P Y
Sbjct: 172 ICGKTPEY 179


>sp|ATGT_SACS2|TRNA-GUANINE(15) transglycosylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PICGKQPPYD 10
PIC K P D
Sbjct: 281 PICSKYTPKD 290


>sp|SYT_METST|THREONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 GKQPPY 9
GKQPP+
Sbjct: 196 GKQPPH 201


>sp|AATA_METM5|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C5 /

Query: 1 PICGKQPP 8
P GKQPP
Sbjct: 198 PSKGKQPP 205


>sp|NADM_ARCFU|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ICGKQPPYD 10
+C PP+D
Sbjct: 91 VCSMVPPFD 99


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GKQPPYD 10
GK+ PYD
Sbjct: 100 GKETPYD 106


>sp|TFE_THEKO|TRANSCRIPTION factor E|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PICGK 5
PICGK
Sbjct: 138 PICGK 142


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 3 CGKQPPYD 10
CG++P Y+
Sbjct: 1297 CGEEPLYE 1304


>sp|ATGT_SULAC|TRNA-GUANINE(15) transglycosylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PICGKQPPYD 10
PIC + P D
Sbjct: 278 PICSRYSPKD 287


>sp|TRUD1_METJA|PROBABLE tRNA pseudouridine synthase D|Methanocaldococcus jannaschii (strain

Query: 3 CGKQPPYD 10
CG PYD
Sbjct: 204 CGTPLPYD 211


>sp|HCP_METAR|HYDROXYLAMINE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 2 ICGKQP 7
+CGK+P
Sbjct: 20 VCGKKP 25


>sp|HCP_METTH|HYDROXYLAMINE reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 ICGKQP 7
+CGK+P
Sbjct: 20 VCGKEP 25


>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ICGKQPPY 9
ICGK P +
Sbjct: 175 ICGKTPVF 182


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 ICGKQPPY 9
ICGK P +
Sbjct: 175 ICGKAPIF 182


>sp|HYPA_METAC|HYDROGENASE maturation factor HypA|Methanosarcina acetivorans (strain ATCC

Query: 1 PICGK 5
P+CGK
Sbjct: 106 PVCGK 110


>sp|TIAS_METV3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanococcus voltae (strain

Query: 3 CGKQPPYD 10
CGK+ YD
Sbjct: 460 CGKRLKYD 467


>sp|SYM_AERPE|METHIONINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 ICGKQPPY 9
+CG +P Y
Sbjct: 175 LCGSKPVY 182




8|SequenceR|45|36|QGRPLPICGK

>sp|KPTA_THEAC|PROBABLE RNA 2'-phosphotransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 QGRPLPICGK 10
+GR P+CGK
Sbjct: 12 RGRECPVCGK 21


>sp|AMT2_METJA|AMMONIUM transporter Amt2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GRPLPICG 9
GRP+PI G
Sbjct: 210 GRPVPILG 217


>sp|CDPAS_META3|CDP-ARCHAEOL synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 QGRPLPI 7
QGRP PI
Sbjct: 119 QGRPAPI 125


>sp|Y3403_METJA|UNCHARACTERIZED protein MJECS03|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RPLPICGK 10
R +P+CGK
Sbjct: 87 RFIPVCGK 94


>sp|RS6E_METS5|SMALL ribosomal subunit protein eS6|Metallosphaera sedula (strain ATCC

Query: 1 QGRPLPIC 8
+GR LP+C
Sbjct: 37 EGRTLPVC 44


>sp|DNLI_PYRHO|DNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QGRPLP 6
+GRPLP
Sbjct: 306 EGRPLP 311


>sp|AMTAB_METJA|PROBABLE threonylcarbamoyladenosine tRNA

Query: 4 PLPIC 8
PLPIC
Sbjct: 148 PLPIC 152


>sp|Y931_METLZ|UPF0212 protein Mlab_0931|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 PLPICGK 10
P P CGK
Sbjct: 50 PCPYCGK 56


>sp|AROC_PYRNV|CHORISMATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 GRPLPI 7
GRPLP+
Sbjct: 177 GRPLPV 182


>sp|DTDA_METKA|D-AMINOACYL-TRNA deacylase|Methanopyrus kandleri (strain AV19 /

Query: 2 GRPLPIC 8
G+PL +C
Sbjct: 105 GKPLEVC 111


>sp|DNAJ_METAC|CHAPERONE protein DnaJ|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 PLPICG 9
P P+CG
Sbjct: 200 PCPVCG 205




9|SequenceR|50|41|DAKETQGRPL

>sp|AROC_PYRNV|CHORISMATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 DAKETQGRPL 10
D K++ GRPL
Sbjct: 171 DVKKSWGRPL 180


>sp|HEM1_CALMQ|GLUTAMYL-TRNA reductase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 DAKETQGRPL 10
DA+E G+P+
Sbjct: 252 DAEELSGKPI 261


>sp|HJC_HALVD|CROSSOVER junction endodeoxyribonuclease Hjc|Haloferax volcanii (strain

Query: 1 DAKETQGRPL 10
+AK + GRP+
Sbjct: 54 EAKASSGRPI 63


>sp|COFE_METTH|COENZYME F420:L-glutamate ligase|Methanothermobacter thermautotrophicus

Query: 3 KETQGRPL 10
+TQGRP
Sbjct: 155 SDTQGRPF 162


>sp|RPO1C_AERPE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Aeropyrum pernix (strain ATCC 700893

Query: 1 DAKETQGRPL 10
DAK+T +PL
Sbjct: 105 DAKQTPSQPL 114


>sp|SYT_METHJ|THREONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 AKETQGRPL 10
KET G+P
Sbjct: 586 GKETSGKPF 594


>sp|COFE_METKA|COENZYME F420:L-glutamate ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 ETQGRPL 10
+TQGRP
Sbjct: 155 DTQGRPF 161




10|SequenceR|55|46|ALDVHDAKET

>sp|MCRAM_METJA|[METHYL coenzyme M reductase]-L-arginine

Query: 2 LDVHDAKET 10
LD+ D KET
Sbjct: 335 LDLKDVKET 343


>sp|HEM2_ARCFU|DELTA-AMINOLEVULINIC acid dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LDVHDAKE 9
+D+H+A+E
Sbjct: 222 MDIHNARE 229




11|SequenceR|60|51|DIMLTALDVH

>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 2 IMLTALDVH 10
+ +TALD+H
Sbjct: 1547 VFVTALDIH 1555




12|SequenceR|65|56|EEGNFDIMLT

>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 EEGNFDIMLT 10
E+G+FDI++T
Sbjct: 188 EKGDFDILVT 197


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EEGNFDIMLT 10
E G+FD+++T
Sbjct: 179 ERGDFDVLVT 188


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EEGNFDIMLT 10
+ GNFDI++T
Sbjct: 180 KSGNFDILVT 189


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 EGNFDIML 9
EG+FDI+L
Sbjct: 976 EGSFDILL 983


>sp|Y977_METKA|UNCHARACTERIZED glycosyltransferase MK0977|Methanopyrus kandleri (strain AV19 /

Query: 1 EEGNFDIML 9
E+G+FD++L
Sbjct: 46 EDGSFDLLL 54


>sp|VPB18_ARCFU|PUTATIVE antitoxin VapB18|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EEGNFDIMLT 10
+EGNFD+++
Sbjct: 34 KEGNFDLLMV 43


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 1 EEGNFDIMLT 10
++G+FDI++T
Sbjct: 180 KDGDFDILVT 189


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EEGNFDIMLT 10
+ GNFDI ++
Sbjct: 182 KSGNFDIFIS 191


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GNFDIMLT 10
G+FDI++T
Sbjct: 182 GDFDILIT 189


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 3 GNFDIMLT 10
G+FD+++T
Sbjct: 254 GDFDVLIT 261


>sp|Y808_METJA|UNCHARACTERIZED protein MJ0808|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EEGNFDIMLT 10
E G F++M+T
Sbjct: 147 ENGMFNVMIT 156


>sp|OFOA1_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Sulfurisphaera tokodaii (strain DSM

Query: 1 EEGNFDIML 9
EE NFD L
Sbjct: 534 EESNFDFTL 542


>sp|Y106A_PYRHO|PUTATIVE antitoxin PH1062.1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EEGNFDIML 9
+EGN D+++
Sbjct: 36 KEGNLDVLM 44


>sp|OFOA_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Sulfolobus sp

Query: 1 EEGNFDIML 9
EE NFD L
Sbjct: 534 EESNFDFTL 542


>sp|FAU1_SULTO|PROBABLE ribonuclease FAU-1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EEGNFDIM 8
EEG++DI+
Sbjct: 317 EEGDYDIV 324


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 1 EEGNFDIM 8
E+GN+D++
Sbjct: 122 EDGNYDLV 129


>sp|PMK_SACS2|PHOSPHOMEVALONATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GNFDIML 9
GN+D+ML
Sbjct: 177 GNYDMML 183


>sp|FAU1_SACS2|PROBABLE ribonuclease FAU-1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EEGNFDIM 8
EEG++DI+
Sbjct: 322 EEGDYDIV 329


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 1 EEGNFDIMLT 10
+EG DI++T
Sbjct: 973 KEGKIDIIMT 982




13|SequenceR|70|61|MAWAKEEGNF

>sp|HIS6_METHJ|IMIDAZOLE glycerol phosphate synthase subunit|Methanospirillum hungatei JF-1

Query: 1 MAWAKEEGN 9
+AWAKE N
Sbjct: 171 IAWAKEAEN 179


>sp|PURA_HALMA|ADENYLOSUCCINATE synthetase|Haloarcula marismortui (strain ATCC 43049

Query: 3 WAKEEGNF 10
WAK E NF
Sbjct: 391 WAKCEANF 398


>sp|TYSY_HALVO|THYMIDYLATE synthase|Haloferax volcanii (Halobacterium volcanii)

Query: 2 AWAKEEGNF 10
AWA EEG+
Sbjct: 94 AWADEEGHL 102


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 AWAKEEGNF 10
+WA+++G F
Sbjct: 435 SWAEKDGTF 443


>sp|AAT_SACS2|ASPARTATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 MAWAKEEG 8
+ W++EEG
Sbjct: 148 LKWSREEG 155


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 2 AWAKEEGNF 10
WA++EG F
Sbjct: 439 CWAEQEGTF 447


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 3 WAKEEGNF 10
WA E+G F
Sbjct: 313 WAYEKGKF 320


>sp|HMGCS_METS5|HYDROXYMETHYLGLUTARYL-COA synthase|Metallosphaera sedula (strain ATCC 51363

Query: 3 WAKEEG 8
W KEEG
Sbjct: 26 WGKEEG 31


>sp|Y006_METJA|UNCHARACTERIZED oxidoreductase MJ0006|Methanocaldococcus jannaschii (strain ATCC

Query: 3 WAKEEGNF 10
WA+++G F
Sbjct: 315 WAEKDGTF 322


>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 3 WAKEEGNF 10
WA+++G F
Sbjct: 435 WAEKDGTF 442


>sp|AROA_METBU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcoides burtonii (strain DSM

Query: 3 WAKEEG 8
W KEEG
Sbjct: 283 WNKEEG 288


>sp|KTHY2_SACS2|PROBABLE thymidylate kinase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 AKEEGNF 10
AKEE NF
Sbjct: 179 AKEESNF 185


>sp|Y2337_ARCFU|UNCHARACTERIZED protein AF_2337|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MAWAKEEG 8
M WA+E+G
Sbjct: 254 MKWAREQG 261


>sp|DHYS1_METAC|PROBABLE deoxyhypusine synthase 1|Methanosarcina acetivorans (strain ATCC

Query: 2 AWAKEEGNF 10
AW +EGN
Sbjct: 201 AWLYKEGNL 209


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 WAKEEG 8
WAKE G
Sbjct: 265 WAKENG 270


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 3 WAKEEGNF 10
WA+++G F
Sbjct: 438 WAEKDGTF 445


>sp|THIC_META3|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 AWAKEE 7
AWAKE+
Sbjct: 364 AWAKEK 369


>sp|PCKG_SULAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 AWAKEEG 8
AW KE G
Sbjct: 352 AWTKESG 358


>sp|DHYS_METTE|PROBABLE deoxyhypusine synthase|Methanosarcina thermophila

Query: 2 AWAKEEGN 9
AW +EGN
Sbjct: 201 AWLYKEGN 208


>sp|DHYS1_METMA|PROBABLE deoxyhypusine synthase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 AWAKEEGN 9
AW +EGN
Sbjct: 201 AWLYKEGN 208


>sp|RPA_METJA|REPLICATION factor A|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AWAKEEGNF 10
A+AKE G++
Sbjct: 468 AYAKERGDY 476


>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 2 AWAKEEG 8
AW EEG
Sbjct: 281 AWVSEEG 287


>sp|RL15_ARCFU|LARGE ribosomal subunit protein uL15|Archaeoglobus fulgidus (strain

Query: 1 MAWAKEEGNF 10
+ W KEEG
Sbjct: 84 LRWLKEEGKL 93




14|SequenceR|75|66|FIWVAMAWAK

>sp|YC8A_METJA|UNCHARACTERIZED protein MJ1282.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FIWVAMAW 8
F+W++M W
Sbjct: 28 FLWISMLW 35


>sp|Y958_METJA|UNCHARACTERIZED protein MJ0958|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FIWVAMAWAK 10
+W+A+ W K
Sbjct: 417 LLWMAILWKK 426




15|SequenceR|80|71|RNIAAFIWVA

>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 IAAFIWV 9
+AAF+W+
Sbjct: 211 LAAFLWL 217




16|SequenceR|85|76|EYLDRRNIAA

>sp|CDC62_SACS2|ORC1-TYPE DNA replication protein 2|Saccharolobus solfataricus (strain ATCC

Query: 1 EYLDRRNI 8
EYLDRRNI
Sbjct: 139 EYLDRRNI 146


>sp|Y1358_METJA|UNCHARACTERIZED protein MJ1358|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EYLDRRNIAA 10
EY+D NIA+
Sbjct: 115 EYVDEHNIAS 124


>sp|PYRDB_METAR|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanocella arvoryzae (strain

Query: 2 YLDRRNI 8
YLDR+N+
Sbjct: 280 YLDRKNM 286


>sp|HIS1_SULTO|ATP phosphoribosyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EYLDRRNIAA 10
+YL+++NI A
Sbjct: 124 QYLEKKNIKA 133


>sp|TRPD_THEAC|ANTHRANILATE phosphoribosyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 3 LDRRNIAA 10
L+RRNIA+
Sbjct: 246 LERRNIAS 253


>sp|UVRB_METMP|UVRABC system protein B|Methanococcus maripaludis (strain DSM 14266

Query: 1 EYLDRRNIAA 10
EYL +RN+ A
Sbjct: 461 EYLAKRNVKA 470


>sp|PIP_THEAC|PROLINE iminopeptidase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EYLDRRNI 8
EY +RRN+
Sbjct: 197 EYAERRNV 204


>sp|AMPPA_METB6|AMP phosphorylase|Methanoregula boonei (strain DSM 21154

Query: 2 YLDRRNIA 9
YLD RNI
Sbjct: 20 YLDARNIG 27


>sp|CDC62_SULTO|ORC1-TYPE DNA replication protein 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EYLDRRNI 8
+YL++RNI
Sbjct: 140 DYLEKRNI 147


>sp|HIS6_HALWD|IMIDAZOLE glycerol phosphate synthase subunit|Haloquadratum walsbyi (strain

Query: 1 EYLDRRNI 8
EYLD R +
Sbjct: 259 EYLDERGV 266


>sp|CDC62_SULAC|ORC1-TYPE DNA replication protein 2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 EYLDRRNI 8
+YL++RNI
Sbjct: 137 DYLEKRNI 144




17|SequenceR|90|81|DRKAKEYLDR

>sp|CBID_PYRAE|COBALT-PRECORRIN-5B C(1)-methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 RKAKEYLDR 10
R+AKEYL+R
Sbjct: 311 RRAKEYLER 319


>sp|GGR_METLZ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 KAKEYLDR 10
+AK+YLDR
Sbjct: 235 RAKDYLDR 242


>sp|GGR_ARCFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DRKAKEYLD 9
+R AKEYLD
Sbjct: 227 ERTAKEYLD 235


>sp|ASNH1_METJA|PUTATIVE asparagine synthetase [glutamine-hydrolyzing] 1|Methanocaldococcus

Query: 3 KAKEYLDR 10
+AKEYLDR
Sbjct: 238 EAKEYLDR 245


>sp|KAD_ARCFU|ADENYLATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RKAKEYLDR 10
+KAKEY+D+
Sbjct: 47 KKAKEYMDK 55


>sp|GGR_METMJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 KAKEYLDR 10
+AK+YLDR
Sbjct: 235 RAKDYLDR 242


>sp|ORNAT_PYRHO|ORNITHINE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DRKAKEY 7
DRK KEY
Sbjct: 385 DRKTKEY 391


>sp|FAU1_PYRAE|PROBABLE ribonuclease FAU-1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DRKAKEYLD 9
DR++KE LD
Sbjct: 240 DRRSKEVLD 248


>sp|BACR_HALHM|BACTERIORHODOPSIN halobium (strain mex)

Query: 1 DRKAKEY 7
D+KA+EY
Sbjct: 23 DKKAREY 29


>sp|GLK_PYRCJ|GLUCOKINASE calidifontis (strain DSM 21063

Query: 2 RKAKEYLD 9
RKA E+LD
Sbjct: 202 RKAVEFLD 209


>sp|GGR_METB6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoregula boonei (strain DSM 21154

Query: 3 KAKEYLDR 10
+AK+YLD+
Sbjct: 235 RAKDYLDK 242


>sp|DPOL_THEGO|DNA polymerase|Thermococcus gorgonarius

Query: 2 RKAKEYLD 9
+KAKE+LD
Sbjct: 558 KKAKEFLD 565


>sp|HELS_PYRAB|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus abyssi (strain GE5 /

Query: 2 RKAKEYLDR 10
+K K YLDR
Sbjct: 259 KKVKNYLDR 267


>sp|THSA_THEK8|CHAPERONIN subunit alpha|Thermococcus sp. (strain KS-8)

Query: 2 RKAKEYLDR 10
RKA+E LD+
Sbjct: 109 RKAEELLDQ 117


>sp|THSB_THEK1|CHAPERONIN subunit beta|Thermococcus sp. (strain JCM 11816

Query: 2 RKAKEYLDR 10
RKA+E LD+
Sbjct: 109 RKAEELLDQ 117


>sp|THSA_THEKO|CHAPERONIN subunit alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RKAKEYLDR 10
RKA+E LD+
Sbjct: 109 RKAEELLDQ 117


>sp|THSA_THEK1|CHAPERONIN subunit alpha|Thermococcus sp. (strain JCM 11816

Query: 2 RKAKEYLDR 10
RKA+E LD+
Sbjct: 109 RKAEELLDQ 117


>sp|THSB_THEKO|CHAPERONIN subunit beta|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RKAKEYLDR 10
RKA+E LD+
Sbjct: 109 RKAEELLDQ 117


>sp|THS_METJA|THERMOSOME subunit|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RKAKEYLDR 10
RKA+E LD+
Sbjct: 108 RKAEELLDQ 116


>sp|THSB_THEK8|CHAPERONIN subunit beta|Thermococcus sp. (strain KS-8)

Query: 2 RKAKEYLDR 10
RKA+E LD+
Sbjct: 109 RKAEELLDQ 117


>sp|GGR_METVS|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus vannielii (strain ATCC 35089

Query: 2 RKAKEYLD 9
+KA EYLD
Sbjct: 227 KKAIEYLD 234


>sp|PURA_PYRFU|ADENYLOSUCCINATE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RKAKEYLD 9
RKAKE+++
Sbjct: 303 RKAKEFIE 310


>sp|PURA_THEON|ADENYLOSUCCINATE synthetase|Thermococcus onnurineus (strain NA1)

Query: 2 RKAKEYLD 9
RKAKE+++
Sbjct: 303 RKAKEFIE 310


>sp|PURA_PYRAB|ADENYLOSUCCINATE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 2 RKAKEYLD 9
RKAKE+++
Sbjct: 303 RKAKEFIE 310


>sp|KAD_METBF|ADENYLATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 4 AKEYLDR 10
AKEY+D+
Sbjct: 49 AKEYMDK 55


>sp|DEOC_THEAC|DEOXYRIBOSE-PHOSPHATE aldolase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 AKEYLD 9
AKEYLD
Sbjct: 51 AKEYLD 56


>sp|DNAK_THEAC|CHAPERONE protein DnaK|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DRKAKEYLD 9
DRKAKE ++
Sbjct: 502 DRKAKEQIE 510


>sp|PURA_PYRHO|ADENYLOSUCCINATE synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RKAKEYLD 9
RKAKE+++
Sbjct: 303 RKAKEFIE 310




18|SequenceR|95|86|GWKPEDRKAK

>sp|Y2236_ARCFU|UNCHARACTERIZED protein AF_2236|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PEDRKAK 10
PEDRKAK
Sbjct: 110 PEDRKAK 116


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 GWKPEDRKAK 10
G PEDRK K
Sbjct: 300 GTSPEDRKKK 309


>sp|RRP42_AERPE|EXOSOME complex component Rrp42|Aeropyrum pernix (strain ATCC 700893

Query: 1 GWKPEDRKAK 10
GW+P DR K
Sbjct: 26 GWRPGDRDLK 35


>sp|Y638_METJA|UNCHARACTERIZED protein MJ0638|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WKPEDRK 8
WKP D+K
Sbjct: 200 WKPVDKK 206


>sp|FLAD_METVO|PUTATIVE flagella-related protein D|Methanococcus voltae

Query: 1 GWKPEDRKA 9
G KPED+KA
Sbjct: 68 GKKPEDKKA 76


>sp|Y1061_METJA|UNCHARACTERIZED membrane protein MJ1061|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GWKPEDRKAK 10
G+KPED + K
Sbjct: 254 GYKPEDIEIK 263


>sp|ASPD_METJA|L-ASPARTATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GWKPEDRK 8
G+KPED K
Sbjct: 161 GYKPEDIK 168


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GWKPE 5
GWKPE
Sbjct: 472 GWKPE 476


>sp|HYPA_METKA|HYDROGENASE maturation factor HypA|Methanopyrus kandleri (strain AV19 /

Query: 2 WKPEDRKAK 10
W+PED K
Sbjct: 80 WRPEDESLK 88


>sp|T1M1_METJA|TYPE I restriction enzyme MjaVII|Methanocaldococcus jannaschii (strain

Query: 3 KPEDRKAK 10
KPE+RK K
Sbjct: 461 KPEERKGK 468


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain ATCC

Query: 2 WKPEDRKAK 10
W PE +KAK
Sbjct: 611 WDPETKKAK 619


>sp|MCRA_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain

Query: 1 GWKPEDRKAK 10
GWK +RK +
Sbjct: 30 GWKQSERKTE 39


>sp|MCRA_METTH|METHYL-COENZYME M reductase subunit alpha|Methanothermobacter thermautotrophicus

Query: 1 GWKPEDRKAK 10
GWK +RK +
Sbjct: 30 GWKQSERKTE 39


>sp|BACR_HALHM|BACTERIORHODOPSIN halobium (strain mex)

Query: 1 GWKPEDRKAK 10
GW D+KA+
Sbjct: 18 GWGVTDKKAR 27


>sp|ASSY_HYPBU|ARGININOSUCCINATE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 GWKPEDRKAK 10
GW P D +A+
Sbjct: 366 GWYPSDEEAR 375


>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 GWKPEDRK 8
G KPEDRK
Sbjct: 538 GEKPEDRK 545


>sp|GUAA_PYRAE|GMP synthase [glutamine-hydrolyzing]|Pyrobaculum aerophilum (strain

Query: 1 GWKPED 6
GWKPE+
Sbjct: 117 GWKPEE 122


Query: 2 WKPEDR 7
W+PED+
Sbjct: 191 WRPEDQ 196


>sp|ASSY_PYRAE|ARGININOSUCCINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GWKPEDRKAK 10
GW P D +A+
Sbjct: 370 GWYPSDEEAR 379


>sp|ASSY_METS5|ARGININOSUCCINATE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 GWKPEDRKAK 10
GW P D +A+
Sbjct: 363 GWYPSDEEAR 372


>sp|T1M2_METJA|TYPE I restriction enzyme MjaVIII|Methanocaldococcus jannaschii (strain

Query: 3 KPEDRKAK 10
KPE+RK K
Sbjct: 462 KPEERKGK 469


>sp|FILI_METH6|METHANOGENESIS regulatory histidine kinase FilI|Methanothrix harundinacea (strain

Query: 1 GWKPE 5
GW+PE
Sbjct: 808 GWRPE 812


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 2 WKPEDRKAK 10
W PE +KAK
Sbjct: 611 WDPEKKKAK 619


>sp|GATA_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Archaeoglobus fulgidus (strain ATCC

Query: 2 WKPEDRKAK 10
++PEDRK +
Sbjct: 234 FEPEDRKLR 242


>sp|ASSY_SULAC|ARGININOSUCCINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GWKPEDRKAK 10
GW P D A+
Sbjct: 363 GWYPSDEMAR 372


>sp|ASSY_SACS2|ARGININOSUCCINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GWKPEDRKAK 10
GW P D A+
Sbjct: 363 GWYPSDEMAR 372


>sp|PCP_THEKO|PYRROLIDONE-CARBOXYLATE peptidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GWKPED 6
G+KPED
Sbjct: 94 GYKPED 99


>sp|TET_PYRHO|TETRAHEDRAL aminopeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KPEDRK 8
KPEDRK
Sbjct: 126 KPEDRK 131


>sp|MCRA_METKA|METHYL-COENZYME M reductase I subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 GWKPEDRKAK 10
GWK +RK +
Sbjct: 33 GWKQSERKKE 42


>sp|IF2P_HALLT|PROBABLE translation initiation factor IF-2|Halorubrum lacusprofundi (strain

Query: 1 GWKPED 6
GW P+D
Sbjct: 142 GWNPQD 147


>sp|MCRA_METFE|METHYL-COENZYME M reductase subunit alpha|Methanothermus fervidus

Query: 1 GWKPEDRKAK 10
GWK +RK +
Sbjct: 33 GWKQSERKKE 42


>sp|ASSY_SULTO|ARGININOSUCCINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GWKPEDRKAK 10
GW P D A+
Sbjct: 363 GWYPTDEMAR 372


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 GWKPEDRK 8
G KPEDR+
Sbjct: 534 GEKPEDRQ 541


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 PEDRKA 9
PEDRKA
Sbjct: 925 PEDRKA 930


>sp|Y1188_METJA|UNCHARACTERIZED protein MJ1188|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GWKPED 6
GW PE+
Sbjct: 155 GWSPEE 160


>sp|NUCS1_HALSA|ENDONUCLEASE NucS 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 WKPED 6
WKP+D
Sbjct: 54 WKPDD 58




19|SequenceR|100|91|RANDSGWKPE

>sp|PURT_SULTO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Sulfurisphaera tokodaii

Query: 2 ANDSGWKPE 10
AN+ GW P+
Sbjct: 333 ANNEGWAPK 341


>sp|GALE_METJA|PUTATIVE UDP-glucose 4-epimerase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RANDSGWKPE 10
+A GWKPE
Sbjct: 276 KAESLGWKPE 285


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 DSGWKPE 10
+ GWKPE
Sbjct: 470 EDGWKPE 476


>sp|Y1188_METJA|UNCHARACTERIZED protein MJ1188|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RANDSGWKPE 10
R N GW PE
Sbjct: 150 RINRIGWSPE 159


>sp|Y748_THEPD|PROTEIN Tpen_0748|Thermofilum pendens (strain DSM 2475

Query: 2 ANDSGWKPE 10
A D GW PE
Sbjct: 156 AVDEGWDPE 164


>sp|GUAA_PYRAE|GMP synthase [glutamine-hydrolyzing]|Pyrobaculum aerophilum (strain

Query: 6 GWKPE 10
GWKPE
Sbjct: 117 GWKPE 121


>sp|RADA_HALVD|DNA repair and recombination protein|Haloferax volcanii (strain ATCC

Query: 1 RANDSGWKPE 10
R D+G KPE
Sbjct: 334 RVQDAGLKPE 343


>sp|RADA_HALWD|DNA repair and recombination protein|Haloquadratum walsbyi (strain DSM

Query: 1 RANDSGWKPE 10
R D+G KPE
Sbjct: 334 RVKDAGLKPE 343


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 3 NDSGWKPE 10
ND+GW E
Sbjct: 258 NDNGWNKE 265


>sp|ILVC_IGNAA|KETOL-ACID reductoisomerase (NAD(P)(+))|Ignisphaera aggregans (strain DSM

Query: 1 RANDSGWKP 9
RA D G+KP
Sbjct: 56 RAIDDGFKP 64


>sp|Y1151_ARCFU|UNCHARACTERIZED protein AF_1151|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RANDSGWKP 9
+AN+ WKP
Sbjct: 11 KANERDWKP 19


>sp|THIL_METTH|THIAMINE-MONOPHOSPHATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 RANDSGWK 8
R D GWK
Sbjct: 65 RPRDMGWK 72


>sp|FILI_METH6|METHANOGENESIS regulatory histidine kinase FilI|Methanothrix harundinacea (strain

Query: 6 GWKPE 10
GW+PE
Sbjct: 808 GWRPE 812


>sp|RADA_HALSA|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 1 RANDSGWKPE 10
R D G KPE
Sbjct: 334 RVQDEGLKPE 343


>sp|RADA_HALS3|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 1 RANDSGWKPE 10
R D G KPE
Sbjct: 334 RVQDEGLKPE 343


>sp|RFCL_HALSA|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC

Query: 2 ANDSGW 7
AND+GW
Sbjct: 58 ANDAGW 63


>sp|RFCL_HALS3|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 29341

Query: 2 ANDSGW 7
AND+GW
Sbjct: 58 ANDAGW 63


>sp|RL32_PYRAE|LARGE ribosomal subunit protein eL32|Pyrobaculum aerophilum (strain

Query: 1 RANDSGWK 8
R DSGW+
Sbjct: 39 RIEDSGWR 46


>sp|TOP1_AERPE|DNA topoisomerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 ANDSGWKPE 10
A GWKP+
Sbjct: 232 ARPHGWKPQ 240


>sp|RFCL_HALLT|REPLICATION factor C large subunit|Halorubrum lacusprofundi (strain ATCC

Query: 2 ANDSGWK 8
AND GW+
Sbjct: 58 ANDMGWE 64




20|SequenceR|105|96|TPNSVRANDS

>sp|TRPE_HALVD|ANTHRANILATE synthase component 1|Haloferax volcanii (strain ATCC 29605

Query: 1 TPNSVRAND 9
TP SVR D
Sbjct: 376 TPGSVRVED 384


>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 3 NSVRAND 9
N++RAND
Sbjct: 607 NNIRAND 613




21|SequenceR|110|101|EQCIVTPNSV

>sp|RS8_THEPD|SMALL ribosomal subunit protein uS8|Thermofilum pendens (strain DSM

Query: 1 EQCIVTPNS 9
+QC++ P+S
Sbjct: 22 KQCVIYPSS 30


>sp|CSM2_METJA|CRISPR system Cms protein Csm2|Methanocaldococcus jannaschii (strain

Query: 2 QCIVTPNSV 10
+CI+ PN +
Sbjct: 6 KCILNPNEI 14


>sp|MUTS_NATPD|DNA mismatch repair protein MutS|Natronomonas pharaonis (strain ATCC

Query: 1 EQCIVTP 7
E C+VTP
Sbjct: 195 EDCMVTP 201


>sp|UVRC_HALWD|UVRABC system protein C|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EQCIVTPNSV 10
++ +VTPN V
Sbjct: 487 DELVVTPNGV 496


>sp|GLMM_METM7|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C7 /

Query: 3 CIVTPN 8
C+V+PN
Sbjct: 171 CVVSPN 176


>sp|MCH_METTM|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanothermobacter marburgensis (strain ATCC

Query: 1 EQCIVTPNSV 10
E+C V+P +V
Sbjct: 157 EECDVSPENV 166


>sp|PSB_METPS|PROTEASOME subunit beta|Methanocella paludicola (strain DSM 17711

Query: 3 CIVTPNSV 10
C++TP V
Sbjct: 184 CVITPGKV 191


>sp|GLMM_METM5|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C5 /

Query: 3 CIVTPN 8
C+V+PN
Sbjct: 171 CVVSPN 176


>sp|GLMM_METMP|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain DSM 14266

Query: 3 CIVTPN 8
C+V+PN
Sbjct: 171 CVVSPN 176


>sp|Y1652_METMP|UNCHARACTERIZED solute-binding protein MMP1652|Methanococcus maripaludis (strain

Query: 3 CIVTPNSV 10
CIV+P S+
Sbjct: 188 CIVSPESI 195


>sp|ACDB_METTH|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanothermobacter

Query: 3 CIVTPN 8
CIVTP+
Sbjct: 200 CIVTPD 205


>sp|NNRD_CENSY|ADP-DEPENDENT (S)-NAD(P)H-hydrate dehydratase|Cenarchaeum symbiosum (strain A)

Query: 1 EQCIVTPNS 9
+ C+VTP++
Sbjct: 152 KNCLVTPHA 160


>sp|Y1254_METJA|UNCHARACTERIZED protein MJ1254|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CIVTPN 8
CIVTP+
Sbjct: 69 CIVTPD 74


>sp|KDXD_HALVD|PROBABLE 2-keto-3-deoxyxylonate dehydratase|Haloferax volcanii (strain ATCC

Query: 3 CIVTPNSV 10
C+VTP V
Sbjct: 193 CVVTPEDV 200


>sp|ARFB_METMP|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus maripaludis (strain DSM

Query: 1 EQCIVTPNSV 10
+ C +T NSV
Sbjct: 124 KDCFITMNSV 133




22|SequenceR|115|106|EEISDEQCIV

>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 3 ISDEQCI 9
ISDEQCI
Sbjct: 305 ISDEQCI 311


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 EEISDEQCIV 10
E+I DE CI+
Sbjct: 188 EKIPDEDCIL 197


>sp|Y1303_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ1303|Methanocaldococcus jannaschii

Query: 1 EEISDEQCIV 10
E+I DE CI+
Sbjct: 375 EKIKDENCIL 384


>sp|DTDA_KORCO|D-AMINOACYL-TRNA deacylase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 EISDEQC 8
EISD++C
Sbjct: 32 EISDKRC 38




23|SequenceR|120|111|LGMWEEEISD

>sp|Y781_METJA|UNCHARACTERIZED protein MJ0781|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 MWEEEISD 10
MWEEE+ +
Sbjct: 661 MWEEEVCE 668


>sp|Y1521_ARCFU|ADP-RIBOSE glycohydrolase AF_1521|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GMWEEEISD 10
GMW EE+ +
Sbjct: 106 GMWSEELKE 114


>sp|KAE1_HYPBU|TRNA N6-adenosine threonylcarbamoyltransferase|Hyperthermus butylicus

Query: 1 LGMWEEEI 8
+G W+EEI
Sbjct: 23 VGGWDEEI 30


>sp|PURE_METSM|PROBABLE N5-carboxyaminoimidazole ribonucleotide mutase|Methanobrevibacter

Query: 1 LGMWEEEI 8
LG+++EEI
Sbjct: 129 LGLYDEEI 136


>sp|SPSS1_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocella arvoryzae (strain DSM 22066

Query: 4 WEEEISD 10
WE+E+S+
Sbjct: 285 WEKEVSN 291


>sp|SYE_KORCO|GLUTAMATE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GMWEEEI 8
G W+EEI
Sbjct: 167 GRWDEEI 173


>sp|GLYA_KORCO|SERINE hydroxymethyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LGMWEEEISD 10
LGM EEE+ +
Sbjct: 381 LGMGEEEMKE 390


>sp|Y1567_METJA|UNCHARACTERIZED protein MJ1567|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 MWEEEI 8
MWE+EI
Sbjct: 56 MWEDEI 61


>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 1 LGMWEEEISD 10
LG++EE I D
Sbjct: 223 LGLFEENILD 232


>sp|MRE11_SULAC|DNA double-strand break repair protein|Sulfolobus acidocaldarius

Query: 2 GMWEEEISD 10
G W+ E+SD
Sbjct: 167 GAWQIELSD 175


>sp|AROC_THEKO|CHORISMATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GMWEEEI 8
G WEE+I
Sbjct: 215 GPWEEDI 221


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 MWEEEISD 10
MWEEE S+
Sbjct: 740 MWEEETSE 747


>sp|Y742_METJA|UNCHARACTERIZED protein MJ0742|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGMWEEEISD 10
LG+ +EEI+D
Sbjct: 71 LGITKEEIAD 80


>sp|TYW31_PYRFU|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 LGMWEEEIS 9
LG W E+S
Sbjct: 71 LGKWHREVS 79


>sp|TYW31_PYRHO|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 LGMWEEEIS 9
LG W E+S
Sbjct: 71 LGKWHREVS 79


>sp|TYW31_PYRAB|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 LGMWEEEIS 9
LG W E+S
Sbjct: 71 LGKWHREVS 79




24|SequenceR|125|116|SLYELLGMWE

>sp|RL4_PYRAE|LARGE ribosomal subunit protein uL4|Pyrobaculum aerophilum (strain ATCC

Query: 2 LYELLGMW 9
L+E LG+W
Sbjct: 187 LFEALGLW 194


>sp|RS7_METBU|SMALL ribosomal subunit protein uS7|Methanococcoides burtonii (strain

Query: 2 LYELLGMWE 10
+Y+L G W+
Sbjct: 1 MYKLFGKWD 9


>sp|MPGP_AERPE|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SLYELLGMWE 10
S+YE++ +W+
Sbjct: 49 SIYEIVELWD 58


>sp|RS7_METMA|SMALL ribosomal subunit protein uS7|Methanosarcina mazei (strain ATCC

Query: 2 LYELLGMWE 10
LY++ G W+
Sbjct: 4 LYKIFGKWD 12


>sp|RS7_METAC|SMALL ribosomal subunit protein uS7|Methanosarcina acetivorans (strain

Query: 2 LYELLGMWE 10
LY++ G W+
Sbjct: 4 LYKIFGKWD 12


>sp|Y940_METJA|TPR repeat-containing protein MJ0940|Methanocaldococcus jannaschii

Query: 1 SLYELLGMWE 10
LYELLG ++
Sbjct: 92 QLYELLGNFD 101


>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 2 LYELLG 7
LYELLG
Sbjct: 219 LYELLG 224




25|SequenceR|130|121|CISIRSLYEL

>sp|Y1054_METJA|UNCHARACTERIZED protein MJ1054|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CISIRSLYEL 10
CI+ + L+EL
Sbjct: 278 CITFKELFEL 287


>sp|ASSY_METST|ARGININOSUCCINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 CISIRSLYE 9
CI SLYE
Sbjct: 75 CIKTNSLYE 83


>sp|SYFA_METKA|PHENYLALANINE--TRNA ligase alpha subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 ISIRSLYEL 10
+S+R LYE+
Sbjct: 364 VSVRKLYEV 372


>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 ISIRSLYE 9
I +RSLYE
Sbjct: 522 IPLRSLYE 529


>sp|SURE_PICTO|5'-NUCLEOTIDASE SurE|Picrophilus torridus (strain ATCC 700027

Query: 2 ISIRSLY 8
IS+RSLY
Sbjct: 95 ISLRSLY 101


>sp|COBD_PYRAB|PROBABLE cobalamin biosynthesis protein CobD|Pyrococcus abyssi (strain GE5

Query: 3 SIRSLYE 9
+IRSLYE
Sbjct: 91 AIRSLYE 97


>sp|Y1399_METJA|UPF0200 protein MJ1399|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 IRSLYEL 10
IRSLYE+
Sbjct: 90 IRSLYEV 96


>sp|COBD_PYRHO|PROBABLE cobalamin biosynthesis protein CobD|Pyrococcus horikoshii (strain

Query: 3 SIRSLYE 9
+IRSLYE
Sbjct: 89 AIRSLYE 95




26|SequenceR|135|126|DKKMKCISIR

>sp|AMPA_CENSY|PROBABLE cytosol aminopeptidase|Cenarchaeum symbiosum (strain A)

Query: 2 KKMKCISIR 10
KKM+CI ++
Sbjct: 198 KKMRCIVLK 206


>sp|P845_THEAC|PHOSPHATASE Ta0845|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KKMKCISI 9
KK++CIS+
Sbjct: 165 KKLRCISV 172


>sp|AGLB_METVO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanococcus voltae

Query: 1 DKKMKC 6
DKK+KC
Sbjct: 30 DKKVKC 35


>sp|CARA_METM6|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain C6

Query: 1 DKKMKCISI 9
D+K KC+ I
Sbjct: 168 DEKTKCVLI 176




27|SequenceR|140|131|YKKRYDKKMK

>sp|GVPL_HALMT|GAS vesicle protein L|Haloferax mediterranei (strain ATCC 33500

Query: 2 KKRYDKKMK 10
KK+YDK+++
Sbjct: 222 KKQYDKRLR 230


>sp|SYE_HALSA|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 YKKRYD 6
YK+RYD
Sbjct: 134 YKQRYD 139


>sp|SYE_HALS3|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 YKKRYD 6
YK+RYD
Sbjct: 134 YKQRYD 139


>sp|SYE_HALMA|GLUTAMATE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 YKKRYD 6
YK+RYD
Sbjct: 134 YKQRYD 139


>sp|GATD_NANEQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 YKKRYDKKM 9
Y+KR DK+M
Sbjct: 263 YRKRSDKEM 271


>sp|AATA_NITMS|A-TYPE ATP synthase subunit A|Nitrosopumilus maritimus (strain SCM1)

Query: 1 YKKRYD 6
YK RYD
Sbjct: 201 YKNRYD 206


>sp|DCDB_METLZ|DCTP deaminase, dUMP-forming|Methanocorpusculum labreanum (strain ATCC

Query: 4 RYDKKM 9
RYD+KM
Sbjct: 177 RYDRKM 182


>sp|PUR7_CENSY|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Cenarchaeum symbiosum (strain A)

Query: 1 YKKRYDKK 8
YKKR+D++
Sbjct: 230 YKKRFDEE 237


>sp|THSA_SACS2|CHAPERONIN subunit alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YKKRYDKKMK 10
YKK Y+K ++
Sbjct: 124 YKKAYNKALE 133


>sp|AATA_METTP|A-TYPE ATP synthase subunit A|Methanothrix thermoacetophila (strain DSM

Query: 1 YKKRYD 6
YKK+YD
Sbjct: 509 YKKQYD 514




28|SequenceR|145|136|RVYKRYKKRY

>sp|HTPX2_SULTO|PROTEASE HtpX homolog 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VYKRYKKRY 10
+ +RYKK+Y
Sbjct: 255 IIERYKKKY 263


>sp|OTC_METKA|ORNITHINE carbamoyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 RVYKRYKKRY 10
RV +R+K+RY
Sbjct: 27 RVAERFKERY 36


>sp|PYRG_SACS2|CTP synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VYKRYKKRY 10
VY+R++ RY
Sbjct: 460 VYERHRHRY 468


>sp|PYRG_SULTO|CTP synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VYKRYKKRY 10
VY+R++ RY
Sbjct: 456 VYERHRHRY 464


>sp|SYK_METHJ|LYSINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 KRYKKRY 10
KRY++RY
Sbjct: 154 KRYRQRY 160


>sp|ADEC_STAMF|ADENINE deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 2 VYKRYKK 8
VY++YKK
Sbjct: 547 VYEKYKK 553


>sp|G3P_META3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 VYKRYKKR 9
+YK+Y K+
Sbjct: 98 IYKKYNKK 105


>sp|SYK2_METMA|LYSINE--TRNA ligase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VYKRYKKRY 10
V RY+KRY
Sbjct: 170 VETRYRKRY 178


>sp|CDC6B_HALMA|ORC1-TYPE DNA replication protein 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 VYKRYKK 8
VY+RYK+
Sbjct: 321 VYQRYKE 327


>sp|PYRG_METJA|CTP synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VYKRYKKRY 10
VY+R++ RY
Sbjct: 461 VYERHRHRY 469


>sp|SYK2_METAC|LYSINE--TRNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VYKRYKKRY 10
V RY+KRY
Sbjct: 170 VETRYRKRY 178


>sp|RS17_METVA|SMALL ribosomal subunit protein uS17|Methanococcus vannielii

Query: 3 YKRYKKR 9
Y+RY+KR
Sbjct: 59 YERYEKR 65


>sp|GGR_METM6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C6 /

Query: 4 KRYKKRY 10
KR+K+RY
Sbjct: 324 KRWKERY 330


>sp|PYRG_THEAC|CTP synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VYKRYKKRY 10
+Y+R++ RY
Sbjct: 448 IYERHRHRY 456


>sp|RS17_METMP|SMALL ribosomal subunit protein uS17|Methanococcus maripaludis (strain

Query: 3 YKRYKKR 9
Y+RY+KR
Sbjct: 59 YERYEKR 65


>sp|PYRG_SULAC|CTP synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VYKRYKKRY 10
+Y+R++ RY
Sbjct: 455 IYERHRHRY 463


>sp|PYRG_THEVO|CTP synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VYKRYKKRY 10
+Y+R++ RY
Sbjct: 448 IYERHRHRY 456


>sp|PYRG_PICTO|CTP synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 VYKRYKKRY 10
+Y+R++ RY
Sbjct: 444 IYERHRHRY 452


>sp|RS17_METMJ|SMALL ribosomal subunit protein uS17|Methanoculleus marisnigri (strain

Query: 3 YKRYKKR 9
YKRY+KR
Sbjct: 60 YKRYEKR 66


>sp|RS17_METPE|SMALL ribosomal subunit protein uS17|Methanosphaerula palustris (strain

Query: 1 RVYKRYKKR 9
R YKRY+KR
Sbjct: 58 RKYKRYEKR 66




29|SequenceR|150|141|CQFRSRVYKR

>sp|OGT_METS5|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 3 FRSRVYK 9
FR RVYK
Sbjct: 72 FRMRVYK 78


>sp|Y529_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0529|Methanocaldococcus

Query: 2 QFRSRVYKR 10
QFR +YK+
Sbjct: 16 QFRENMYKK 24


>sp|RL34_METS3|LARGE ribosomal subunit protein eL34|Methanobrevibacter smithii (strain

Query: 2 QFRSRVYKR 10
++RSR YKR
Sbjct: 5 RYRSRSYKR 13




30|SequenceR|155|146|NRDEICQFRS

>sp|FAEHP_METB6|BIFUNCTIONAL enzyme Fae/Hps|Methanoregula boonei (strain DSM 21154

Query: 1 NRDEICQFR 9
NR+EI QFR
Sbjct: 380 NREEIDQFR 388


>sp|FAEHP_METHJ|BIFUNCTIONAL enzyme Fae/Hps|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 NRDEICQFR 9
N++EI QFR
Sbjct: 380 NKEEIDQFR 388


>sp|FAEHP_METPE|BIFUNCTIONAL enzyme Fae/Hps|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 NRDEICQFR 9
++DEI QFR
Sbjct: 380 HKDEIDQFR 388


>sp|NDK_METS3|NUCLEOSIDE diphosphate kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 NRDEICQF 8
N DEIC +
Sbjct: 133 NEDEICDY 140


>sp|PURO_META3|IMP cyclohydrolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 NRDEICQF 8
N +EIC+F
Sbjct: 169 NPEEICKF 176


>sp|SYFB_METB6|PHENYLALANINE--TRNA ligase beta subunit|Methanoregula boonei (strain DSM 21154

Query: 1 NRDEICQF 8
N D +C F
Sbjct: 198 NEDHVCSF 205


>sp|UVRC_METST|UVRABC system protein C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 DEICQFR 9
DEICQ +
Sbjct: 572 DEICQVK 578




31|SequenceR|160|151|EGLRANRDEI

>sp|KADA_METKA|ADENYLATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 EGLRANRDEI 10
EGL +RDEI
Sbjct: 45 EGLVEHRDEI 54


>sp|KAD6_NATPD|PUTATIVE adenylate kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EGLRANRDE 9
EGL A RDE
Sbjct: 36 EGLDAGRDE 44


>sp|AGLUS_METJA|ARCHAEAL glutamate synthase [NADPH]|Methanocaldococcus jannaschii (strain

Query: 1 EGLRANRDEI 10
E LR NRD +
Sbjct: 481 ESLRGNRDRL 490


>sp|RSMA_THEON|PROBABLE ribosomal RNA small subunit|Thermococcus onnurineus (strain NA1)

Query: 2 GLRANRD 8
GLRAN D
Sbjct: 13 GLRANSD 19


>sp|DPHB_HALWD|DIPHTHINE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 LRANRDE 9
++ANRDE
Sbjct: 170 IKANRDE 176




32|SequenceR|165|156|NLSVSEGLRA

>sp|PSA_METVS|PROTEASOME subunit alpha|Methanococcus vannielii (strain ATCC 35089

Query: 1 NLSVSEGL 8
N+SVSEG+
Sbjct: 185 NMSVSEGM 192


>sp|Y808_METJA|UNCHARACTERIZED protein MJ0808|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NLSVSEGLR 9
NL++ EGL+
Sbjct: 270 NLAIEEGLK 278


>sp|ILVC_PYRIL|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum islandicum (strain DSM

Query: 1 NLSVSEGL 8
NL+VSEG
Sbjct: 55 NLAVSEGF 62


>sp|THIL_METKA|THIAMINE-MONOPHOSPHATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 2 LSVSEGLR 9
L +SEGLR
Sbjct: 111 LGISEGLR 118




33|SequenceR|170|161|RTYRKNLSVS

>sp|OTSBH_THEAC|TREHALOSE-6-PHOSPHATE phosphatase-related protein|Thermoplasma acidophilum (strain ATCC

Query: 1 RTYRKNLSV 9
R YRKNL+V
Sbjct: 105 RIYRKNLAV 113


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 1 RTYRKNLSV 9
RT+R NLSV
Sbjct: 446 RTFRLNLSV 454


>sp|Y1761_METMA|MEMO1 family protein MM_1761|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RTYRKNLSV 9
R YR+N SV
Sbjct: 211 RLYRRNASV 219


>sp|Y1422_METBF|MEMO1 family protein Mbar_A1422|Methanosarcina barkeri (strain Fusaro /

Query: 1 RTYRKNLSV 9
R YR+N SV
Sbjct: 209 RLYRRNASV 217


>sp|DHYS1_ARCFU|PROBABLE deoxyhypusine synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YRKNLSV 9
YRKNL +
Sbjct: 191 YRKNLQI 197


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TYRKNLSV 9
TY KNLSV
Sbjct: 1688 TYTKNLSV 1695




34|SequenceR|175|166|KILRLRTYRK

>sp|Y1830_SULTO|UPF0273 protein STK_18300|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KILRLRTY 8
K+LR+RTY
Sbjct: 2 KVLRVRTY 9




35|SequenceR|180|171|QSRHEKILRL

>sp|H669_METJA|PROBABLE ATP-dependent RNA helicase MJ0669|Methanocaldococcus jannaschii

Query: 1 QSRHEKILRL 10
QS+ EK++RL
Sbjct: 274 QSQREKVIRL 283




36|SequenceR|185|176|QEREQQSRHE

>sp|RL15E_DESA1|LARGE ribosomal subunit protein eL15|Desulfurococcus amylolyticus (strain

Query: 1 QEREQQSRHE 10
+ERE + RHE
Sbjct: 192 KERELKKRHE 201




37|SequenceR|190|181|IALLEQEREQ

***** No hits found ******


38|SequenceR|195|186|TKTKGIALLE

>sp|CBIZ_METMA|ADENOSYLCOBINAMIDE amidohydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TKTKGIALLE 10
T+ KG+ALLE
Sbjct: 128 TEAKGLALLE 137


>sp|PURL_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TKTKGIAL 8
T TKGIAL
Sbjct: 428 TGTKGIAL 435


>sp|DHE2_PYRCJ|NAD(+)-DEPENDENT glutamate dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 TKTKGIALLE 10
TK KG LLE
Sbjct: 264 TKAKGPQLLE 273


>sp|GATE_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfurisphaera tokodaii (strain DSM

Query: 1 TKTKGIALLE 10
T+ KG+ LLE
Sbjct: 236 TEIKGVQLLE 245




39|SequenceR|200|191|VPSECTKTKG

>sp|AROE_SULAC|SHIKIMATE dehydrogenase (NADP(+))|Sulfolobus acidocaldarius (strain ATCC

Query: 1 VPSECTKTK 9
VP EC K K
Sbjct: 191 VPDECIKGK 199


>sp|FEN_IGNH4|FLAP endonuclease 1|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VPSECTKT 8
+PS+C KT
Sbjct: 10 IPSKCKKT 17


>sp|GSA_PICTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Picrophilus torridus (strain ATCC 700027

Query: 1 VPSECTKT 8
VP E TKT
Sbjct: 164 VPEEITKT 171


>sp|ADEC_METS3|ADENINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VPSECTKTKG 10
VP+ C +T G
Sbjct: 118 VPATCFETSG 127


>sp|RPO3_PYRNV|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum neutrophilum (strain DSM

Query: 2 PSECT 6
PSECT
Sbjct: 88 PSECT 92


>sp|RNFC_METAC|ION-TRANSLOCATING oxidoreductase complex subunit C|Methanosarcina acetivorans (strain

Query: 2 PSECTKT 8
PSEC +T
Sbjct: 94 PSECAQT 100


>sp|Y1282_METJA|UPF0252 protein MJ1282|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PSECTKTK 9
PSE KTK
Sbjct: 225 PSETVKTK 232


>sp|COFC_METM7|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain C7 /

Query: 2 PSECTKTK 9
P EC KT+
Sbjct: 139 PKECIKTQ 146




40|SequenceR|205|196|MKIPSVPSEC

>sp|CBIM2_METLZ|PUTATIVE cobalt transport protein CbiM|Methanocorpusculum labreanum

Query: 1 MKIPSVPSEC 10
+KIPSV C
Sbjct: 58 LKIPSVTGSC 67


>sp|SYS_METAC|SERINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 MKIPSVPSE 9
+ IP++PSE
Sbjct: 102 LSIPNIPSE 110


>sp|SYS_METMA|SERINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MKIPSVPSE 9
+ IP++PSE
Sbjct: 102 LSIPNIPSE 110


>sp|CBIT_SULTO|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 MKIPSVPSE 9
M++P +P E
Sbjct: 1 MRLPGIPDE 9


>sp|DAPAT_METST|LL-DIAMINOPIMELATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 IPSVPSE 9
+PS+PSE
Sbjct: 170 VPSLPSE 176


>sp|SYS_HALWD|SERINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 MKIPSVPSE 9
+KIP VP +
Sbjct: 104 LKIPQVPDD 112


>sp|Y4659_METAC|UPF0201 protein MA_4659|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 IPSVPSE 9
IPSVP+E
Sbjct: 111 IPSVPAE 117


>sp|CBIT_SULAC|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 MKIPSVPSE 9
M++P +P E
Sbjct: 1 MRVPGIPDE 9


>sp|SYS_METBF|SERINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 MKIPSVPS 8
++IP++PS
Sbjct: 102 LRIPNIPS 109


>sp|APGM_THEAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KIPSVPS 8
K+P++PS
Sbjct: 226 KVPAIPS 232


>sp|ILVD_SULTO|DIHYDROXY-ACID dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KIPSVPSE 9
K+P+VP E
Sbjct: 359 KLPNVPHE 366




41|SequenceR|210|201|DFLLEMKIPS

>sp|NIFE_METMP|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 1 DFLLEMKIPS 10
DF LE+KIP+
Sbjct: 20 DFDLEVKIPN 29


>sp|PUR2_METM5|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C5 /

Query: 1 DFLLEMKIPS 10
D L+EM IP+
Sbjct: 82 DLLIEMGIPT 91


>sp|BIOD_NITMS|ATP-DEPENDENT dethiobiotin synthetase BioD|Nitrosopumilus maritimus (strain SCM1)

Query: 1 DFLLEMKIPS 10
+ + EMKIPS
Sbjct: 131 NLIKEMKIPS 140


>sp|RNP1_METKA|RIBONUCLEASE P protein component 1|Methanopyrus kandleri (strain AV19 /

Query: 3 LLEMKIPS 10
LLE+K+PS
Sbjct: 60 LLELKLPS 67


>sp|G1PDH_STAMF|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Staphylothermus marinus (strain ATCC

Query: 1 DFLLEMKI 8
D+LL+MK+
Sbjct: 27 DYLLKMKL 34


>sp|SYS2_METTH|TYPE-2 serine--tRNA ligase|Methanothermobacter thermautotrophicus (strain

Query: 1 DFLLEMKIP 9
D+ +EMK P
Sbjct: 101 DYTMEMKAP 109


>sp|HIS6_METMA|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina mazei (strain

Query: 1 DFLLEMKIP 9
+FL E KIP
Sbjct: 262 EFLKERKIP 270


>sp|FLAB1_ARCFU|PROBABLE flagellin 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DFLLEMKIP 9
DF++E+K P
Sbjct: 172 DFIIEVKPP 180


>sp|SDO1_AERPE|RIBOSOME maturation protein SDO1 homolog|Aeropyrum pernix (strain ATCC

Query: 3 LLEMKIP 9
LLE+KIP
Sbjct: 165 LLEVKIP 171


>sp|Y1057_METJA|UNCHARACTERIZED glycosyltransferase MJ1057|Methanocaldococcus jannaschii (strain

Query: 1 DFLLEMKIPS 10
+FLL+ +IP+
Sbjct: 206 EFLLKYRIPN 215




42|SequenceR|215|206|HEDDPDFLLE

>sp|PDXS_THEKO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermococcus kodakarensis

Query: 1 HEDDPDFLLE 10
H D+PD L+E
Sbjct: 300 HWDEPDVLVE 309


>sp|PDXS_THEGJ|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermococcus gammatolerans

Query: 1 HEDDPDFLLE 10
H D+PD L+E
Sbjct: 300 HWDEPDVLVE 309


>sp|RS3A_METTH|SMALL ribosomal subunit protein eS1|Methanothermobacter

Query: 4 DPDFLLE 10
DPDFLL+
Sbjct: 39 DPDFLLK 45


>sp|HTPX1_SULTO|PROTEASE HtpX homolog 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EDDPDFLLE 10
E DPD L+E
Sbjct: 267 ESDPDLLIE 275


>sp|PSTB2_NATPD|PHOSPHATE import ATP-binding protein PstB|Natronomonas pharaonis (strain ATCC

Query: 4 DPDFLL 9
DPDFLL
Sbjct: 196 DPDFLL 201


>sp|CFBE_METAC|COENZYME F(430) synthetase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DDPDFLLE 10
D PDF+LE
Sbjct: 274 DAPDFVLE 281


>sp|TRPB1_METMA|TRYPTOPHAN synthase beta chain 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HEDDPDFLLE 10
+++DP+FL E
Sbjct: 41 YKNDPEFLAE 50


>sp|PDXS_PYRHO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrococcus horikoshii (strain

Query: 1 HEDDPDFLLE 10
H D+PD L E
Sbjct: 300 HWDEPDVLAE 309


>sp|PDXS_PYRFU|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrococcus furiosus (strain ATCC

Query: 1 HEDDPDFLLE 10
H D+PD L E
Sbjct: 300 HWDEPDVLAE 309


>sp|PDXS_PYRAB|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrococcus abyssi (strain GE5 /

Query: 1 HEDDPDFLLE 10
H D+PD L E
Sbjct: 300 HWDEPDVLAE 309


>sp|PRIL_METMA|DNA primase large subunit PriL|Methanosarcina mazei (strain ATCC

Query: 3 DDPDFLLE 10
++PDFLLE
Sbjct: 106 ENPDFLLE 113


>sp|AROB_PICTO|3-DEHYDROQUINATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 3 DDPDFLLE 10
+DPD+++E
Sbjct: 187 NDPDYIIE 194


>sp|HISX_METBF|HISTIDINOL dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 4 DPDFLLE 10
DPDF+L+
Sbjct: 334 DPDFVLD 340


>sp|SAHH_HALWD|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16790

Query: 1 HEDDPDFL 8
HED PD L
Sbjct: 146 HEDHPDLL 153


>sp|SAHH_HALWC|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16854

Query: 1 HEDDPDFL 8
HED PD L
Sbjct: 146 HEDHPDLL 153


>sp|PRIL_METAC|DNA primase large subunit PriL|Methanosarcina acetivorans (strain ATCC

Query: 3 DDPDFLLE 10
+ PDFLLE
Sbjct: 106 ETPDFLLE 113


>sp|NIFK_METBA|NITROGENASE molybdenum-iron protein beta chain|Methanosarcina barkeri

Query: 3 DDPDFLLE 10
D PD+LLE
Sbjct: 446 DAPDWLLE 453


>sp|PDXS_METVS|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanococcus vannielii

Query: 4 DPDFLLE 10
DPD +LE
Sbjct: 63 DPDMILE 69


>sp|PDXS_METTH|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanothermobacter

Query: 1 HEDDPDFLLE 10
H DDP+ + E
Sbjct: 256 HYDDPEVIAE 265


>sp|AATE_NATPD|A-TYPE ATP synthase subunit E|Natronomonas pharaonis (strain ATCC 35678

Query: 1 HEDDPDFL 8
HEDD D L
Sbjct: 126 HEDDADLL 133


>sp|PDXS_PYRAE|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum aerophilum (strain

Query: 1 HEDDPDFLLE 10
H DDP+ ++E
Sbjct: 297 HWDDPETVVE 306


>sp|CDC6Z_METTF|ORC1-TYPE DNA replication protein|Methanothermobacter thermautotrophicus

Query: 4 DPDFLLE 10
DPD +LE
Sbjct: 352 DPDLMLE 358


>sp|KHSE_HALMA|HOMOSERINE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 HEDDPDFL 8
H DDP+ +
Sbjct: 199 HRDDPELV 206


>sp|NIFD_METTL|NITROGENASE molybdenum-iron protein alpha chain|Methanothermococcus

Query: 4 DPDFLL 9
DPDF+L
Sbjct: 405 DPDFML 410


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 EDDPDFLLE 10
E DPD ++E
Sbjct: 402 EQDPDVVME 410


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EDDPDFLL 9
ED P+F+L
Sbjct: 687 EDKPEFIL 694


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 1 HEDDPDFL 8
H+D PD++
Sbjct: 36 HQDGPDYV 43


>sp|HELS_THEAC|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HEDDPDFL 8
++D PDF+
Sbjct: 102 YDDSPDFI 109


>sp|EF1A_HALWD|ELONGATION factor 1-alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 2 EDDPDFL 8
E+DPDF+
Sbjct: 365 EEDPDFI 371


>sp|TRPB_META3|TRYPTOPHAN synthase beta chain|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 HEDDPDF 7
++DDP+F
Sbjct: 31 YKDDPEF 37


>sp|BAT_HALSA|BACTERIOOPSIN transcriptional activator|Halobacterium salinarum (strain ATCC

Query: 1 HEDDPD 6
HEDDP+
Sbjct: 598 HEDDPE 603




43|SequenceR|220|211|HVPESHEDDP

>sp|DABA_HALMA|PROBABLE inorganic carbon transporter subunit|Haloarcula marismortui (strain

Query: 2 VPESHEDD 9
VPESH DD
Sbjct: 556 VPESHADD 563


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 2 VPESHEDD 9
+P+SH+DD
Sbjct: 679 IPDSHQDD 686


>sp|RFCL_IGNH4|REPLICATION factor C large subunit|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 HVPESHEDDP 10
+VP+ + DDP
Sbjct: 272 NVPKQYGDDP 281


>sp|NADK_THEON|NAD kinase|Thermococcus onnurineus (strain NA1)

Query: 1 HVPESHEDD 9
++PE HE+D
Sbjct: 41 YLPEFHEED 49


>sp|IF2P_ARCFU|PROBABLE translation initiation factor IF-2|Archaeoglobus fulgidus (strain

Query: 4 ESHEDDP 10
+SHED P
Sbjct: 144 QSHEDTP 150


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 1 HVPESHE 7
HVP SHE
Sbjct: 432 HVPSSHE 438


>sp|PYRH_METTP|URIDYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 VPESHED 8
VPES++D
Sbjct: 90 VPESYDD 96


>sp|RPO5_METLZ|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanocorpusculum labreanum (strain

Query: 1 HVPESHEDDP 10
H+P+ + DDP
Sbjct: 36 HLPKIYHDDP 45


>sp|PURE_METTH|PROBABLE N5-carboxyaminoimidazole ribonucleotide mutase|Methanothermobacter

Query: 2 VPESHEDDP 10
VP +DDP
Sbjct: 181 VPSDSQDDP 189


>sp|RL5_METMP|LARGE ribosomal subunit protein uL5|Methanococcus maripaludis (strain DSM

Query: 1 HVPESH 6
H+PE H
Sbjct: 154 HIPEKH 159


>sp|PCP_THEKO|PYRROLIDONE-CARBOXYLATE peptidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HVPESHE 7
HVP SHE
Sbjct: 165 HVPFSHE 171


>sp|OTC_THEKO|ORNITHINE carbamoyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PESHEDDP 10
PE +E DP
Sbjct: 187 PEGYEPDP 194


>sp|SYK_THEKO|LYSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HVPESHEDD 9
HVPE+ DD
Sbjct: 400 HVPENLTDD 408




44|SequenceR|225|216|QFVVTHVPES

>sp|CHEB1_METMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina mazei

Query: 2 FVVTHVPE 9
FVV H+PE
Sbjct: 194 FVVQHMPE 201


>sp|CHEB1_METAC|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina

Query: 2 FVVTHVPE 9
FVV H+PE
Sbjct: 186 FVVQHMPE 193


>sp|CHEB_METBU|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Methanococcoides

Query: 2 FVVTHVPE 9
F+V H+PE
Sbjct: 188 FIVQHMPE 195


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 QFVVTHVP 8
+F+V H+P
Sbjct: 208 EFLVKHIP 215


>sp|Y2401_ARCFU|UNCHARACTERIZED protein AF_2401|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QFVVTHVPE 9
+F+ +HVP+
Sbjct: 241 EFIASHVPK 249


>sp|AATB_METMA|A-TYPE ATP synthase subunit B|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VVTHVPES 10
++TH+PE+
Sbjct: 432 ILTHLPEN 439


>sp|AATB_METAC|A-TYPE ATP synthase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 3 VVTHVPES 10
++TH+PE+
Sbjct: 432 ILTHLPEN 439


>sp|HMDX_METJA|H(2)-FORMING methylenetetrahydromethanopterin dehydrogenase-related protein

Query: 3 VVTHVPES 10
++ HVPE+
Sbjct: 102 IIEHVPEN 109


>sp|GSA_HALWD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 QFVVTHVP 8
+FV HVP
Sbjct: 97 EFVARHVP 104


>sp|GSA_HALLT|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 QFVVTHVP 8
+FV HVP
Sbjct: 97 EFVARHVP 104


>sp|HMDY_METJA|H(2)-FORMING methylenetetrahydromethanopterin dehydrogenase-related protein

Query: 3 VVTHVPES 10
++ HVPE+
Sbjct: 113 IIEHVPEN 120


>sp|GSA_HALSA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 700922

Query: 1 QFVVTHVP 8
+FV HVP
Sbjct: 98 EFVARHVP 105


>sp|GSA_HALS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 29341

Query: 1 QFVVTHVP 8
+FV HVP
Sbjct: 98 EFVARHVP 105




45|SequenceR|230|221|IGAAGQFVVT

>sp|TSGCD_HALVD|PUTATIVE glucose ABC transporter permease|Haloferax volcanii (strain ATCC

Query: 1 IGAAGQFVVT 10
+GA G FVVT
Sbjct: 44 VGALGGFVVT 53


>sp|RL37A_THEVO|LARGE ribosomal subunit protein eL43|Thermoplasma volcanium (strain

Query: 1 IGAAGQF 7
+GAAG+F
Sbjct: 8 VGAAGRF 14




46|SequenceR|235|226|LITKGIGAAG

>sp|FTSZ2_ARCFU|CELL division protein FtsZ 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ITKGIGAAG 10
IT+G+GA G
Sbjct: 83 ITRGLGAGG 91


>sp|TOP6B_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 4 KGIGAAG 10
+GIGAAG
Sbjct: 113 QGIGAAG 119


>sp|T1S1_METJA|TYPE I restriction enzyme MjaVII|Methanocaldococcus jannaschii (strain

Query: 1 LITKGIG 7
L+TKGIG
Sbjct: 206 LLTKGIG 212


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LITKGIGAA 9
+ITKGI A
Sbjct: 576 IITKGINAG 584


>sp|RL5_PICTO|LARGE ribosomal subunit protein uL5|Picrophilus torridus (strain ATCC

Query: 1 LITKGIGAAG 10
++ G+GAAG
Sbjct: 18 VVNIGVGAAG 27




47|SequenceR|240|231|MMKRALITKG

>sp|SYFA_ARCFU|PHENYLALANINE--TRNA ligase alpha subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MMKRALITK 9
+MKR L+TK
Sbjct: 150 LMKRKLVTK 158


>sp|GLMM_THEON|PROBABLE phosphoglucosamine mutase|Thermococcus onnurineus (strain NA1)

Query: 1 MMKRALIT 8
M+KRALI+
Sbjct: 51 MLKRALIS 58




48|SequenceR|245|236|SAWDLMMKRA

>sp|ARAD_SACS2|ARABINONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 WDLMMKRA 10
WD+M K+A
Sbjct: 112 WDIMGKKA 119


>sp|PELO_PYRAE|PROTEIN pelota homolog|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 AWDLMMK 8
AWDL+ K
Sbjct: 293 AWDLIYK 299


>sp|THIC_PYRAE|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 WDLMMKR 9
WD M+KR
Sbjct: 382 WDEMIKR 388




49|SequenceR|250|241|QYLTGSAWDL

>sp|KAE1B_METMJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 LTGSAWDL 10
L G+AW+L
Sbjct: 14 LEGTAWNL 21


>sp|ILVC_NITMS|KETOL-ACID reductoisomerase (NADP(+))|Nitrosopumilus maritimus (strain SCM1)

Query: 1 QYLTGSAWD 9
Q TG AWD
Sbjct: 155 QDFTGKAWD 163


>sp|TRPF_AERPE|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Aeropyrum pernix (strain ATCC 700893

Query: 4 TGSAW 8
TGSAW
Sbjct: 109 TGSAW 113


>sp|G1PDH_PICTO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Picrophilus torridus (strain ATCC 700027

Query: 2 YLTGSAWDL 10
YL G W+L
Sbjct: 280 YLHGGDWEL 288


>sp|MEND_HALWD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 YLTGSAWD 9
YLT WD
Sbjct: 284 YLTSELWD 291


>sp|Y414_METJA|UNCHARACTERIZED protein MJ0414|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YLTGSAWD 9
YL G+ W+
Sbjct: 388 YLNGTLWE 395


>sp|RFCL_METAC|REPLICATION factor C large subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 YLTGSA 7
YLTGSA
Sbjct: 410 YLTGSA 415


>sp|ILVC_CENSY|KETOL-ACID reductoisomerase (NADP(+))|Cenarchaeum symbiosum (strain A)

Query: 4 TGSAWD 9
TG AWD
Sbjct: 158 TGGAWD 163


>sp|SYC_METS5|CYSTEINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 QYLTGSAW 8
+ LTGS W
Sbjct: 238 ESLTGSTW 245




50|SequenceR|255|246|YDFRDQYLTG

>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 YDFRDQYLTG 10
+D+RD+Y+ G
Sbjct: 660 FDWRDEYVRG 669


>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 1 YDFRDQYLTG 10
YDF +QY+ G
Sbjct: 553 YDFDEQYMFG 562


>sp|OTC_PYRIL|ORNITHINE carbamoyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 DFRDQYLTG 10
DF+ +YL G
Sbjct: 24 DFKTRYLAG 32


>sp|Y1051_METJA|UNCHARACTERIZED protein MJ1051|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YDFRDQYL 8
YDF D YL
Sbjct: 402 YDFIDDYL 409


>sp|SMC_THEAC|CHROMOSOME partition protein Smc|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DFRDQY 7
DF DQY
Sbjct: 591 DFEDQY 596


>sp|SPEB_METJA|AGMATINASE jannaschii (strain ATCC 43067

Query: 2 DFRDQYL 8
D RD+YL
Sbjct: 137 DLRDEYL 143




51|SequenceR|260|251|HIYFLYDFRD

>sp|Y1244_METJA|UNCHARACTERIZED protein MJ1244|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YFLYDFR 9
+FLYD++
Sbjct: 29 FFLYDYK 35


>sp|Y664_METJA|UNCHARACTERIZED protein MJ0664|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IYFLYDFRD 10
IY+++D RD
Sbjct: 92 IYYIFDRRD 100


>sp|RS17_AERPE|SMALL ribosomal subunit protein uS17|Aeropyrum pernix (strain ATCC

Query: 1 HIYFLYD 7
H+Y YD
Sbjct: 57 HVYLYYD 63


>sp|AMPD_METJA|ANHYDROMEVALONATE phosphate decarboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 HIYFLYD 7
H++FLY+
Sbjct: 153 HLHFLYN 159


>sp|Y1598_ARCFU|UNCHARACTERIZED protein AF_1598|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HIYFLYDFRD 10
+IY+LY F +
Sbjct: 52 NIYWLYKFAE 61




52|SequenceR|265|256|SVERCHIYFL

>sp|SYDND_METLZ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 ERCHIYFL 10
+RCHI+ L
Sbjct: 358 QRCHIHSL 365


>sp|SPEE_METJA|POLYAMINE aminopropyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 RCHIYF 9
+CHI+F
Sbjct: 8 KCHIWF 13


>sp|Y482_METJA|UNCHARACTERIZED protein MJ0482|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 CHIYF 9
CHIY+
Sbjct: 21 CHIYY 25


>sp|Y1250_THEVO|UPF0179 protein TV1250|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SVERCHIYF 9
++E+C++Y+
Sbjct: 105 NIEKCNLYY 113


>sp|SYW_THEAC|TRYPTOPHAN--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VERCHIYF 9
+E C IYF
Sbjct: 128 LEPCEIYF 135


>sp|Y1159_THEAC|UPF0179 protein Ta1159|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SVERCHIYFL 10
++E+C++Y+
Sbjct: 108 NIEKCNLYYF 117


>sp|Y1281_METTH|UPF0248 protein MTH_1281|Methanothermobacter thermautotrophicus (strain

Query: 2 VERCHIYFL 10
+ERC I +L
Sbjct: 17 IERCRISYL 25




53|SequenceR|270|261|RQTVLSVERC

>sp|CDPAS_METB6|CDP-ARCHAEOL synthase|Methanoregula boonei (strain DSM 21154

Query: 1 RQTVLSV 7
RQT+LSV
Sbjct: 69 RQTILSV 75




54|SequenceR|275|266|LDGLSRQTVL

>sp|Y272_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0272|Methanocaldococcus

Query: 3 GLSRQTVL 10
G+SRQT++
Sbjct: 24 GVSRQTII 31


>sp|CCA_METKA|CCA-ADDING enzyme|Methanopyrus kandleri (strain AV19 /

Query: 1 LDGLSRQTVL 10
L+G RQT+L
Sbjct: 421 LEGADRQTLL 430




55|SequenceR|280|271|CCSMILDGLS

>sp|DHQS_METB6|3-DEHYDROQUINATE synthase|Methanoregula boonei (strain DSM 21154

Query: 2 CSMILDG 8
CSM+ DG
Sbjct: 173 CSMLADG 179


>sp|SFSA_SULAC|SUGAR fermentation stimulation protein homolog|Sulfolobus acidocaldarius

Query: 2 CSMILDG 8
CS+++DG
Sbjct: 123 CSLVVDG 129


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 1 CCSMILDG 8
CC ++DG
Sbjct: 545 CCHEVVDG 552




56|SequenceR|285|276|PNPDPCCSMI

>sp|Y280_STAMF|UNCHARACTERIZED solute-binding protein Smar_0280|Staphylothermus marinus (strain

Query: 1 PNPDPC 6
PN DPC
Sbjct: 155 PNKDPC 160


>sp|Y1470_META3|UNCHARACTERIZED solute-binding protein Maeo_1470|Methanococcus aeolicus (strain

Query: 1 PNPDPC 6
PN DPC
Sbjct: 158 PNKDPC 163


>sp|WTPA_THEKO|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PNPDPC 6
PN DPC
Sbjct: 160 PNQDPC 165


>sp|WTPA_PYRHO|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PNPDPC 6
PN DPC
Sbjct: 152 PNQDPC 157


>sp|WTPA_PYRFU|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PNPDPC 6
PN DPC
Sbjct: 157 PNQDPC 162


>sp|WTPA_PYRAB|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus abyssi (strain GE5 /

Query: 1 PNPDPC 6
PN DPC
Sbjct: 156 PNQDPC 161


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 2 NPDPCCSM 9
+PDPC S+
Sbjct: 330 SPDPCLSI 337


>sp|Y954_METVS|UNCHARACTERIZED solute-binding protein Mevan_0954|Methanococcus vannielii (strain

Query: 1 PNPDPC 6
PN DPC
Sbjct: 139 PNDDPC 144


>sp|WTPA_ARCFU|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PNPDPC 6
PN DPC
Sbjct: 150 PNDDPC 155


>sp|Y1756_METM5|UNCHARACTERIZED solute-binding protein MmarC5_1756|Methanococcus maripaludis

Query: 1 PNPDPC 6
PN DPC
Sbjct: 156 PNDDPC 161


>sp|Y1880_METMJ|UNCHARACTERIZED solute-binding protein Memar_1880|Methanoculleus marisnigri (strain

Query: 1 PNPDPC 6
PN DPC
Sbjct: 161 PNSDPC 166


>sp|Y925_METM7|UNCHARACTERIZED solute-binding protein MmarC7_0925|Methanococcus maripaludis

Query: 1 PNPDPC 6
PN DPC
Sbjct: 153 PNDDPC 158


>sp|Y1652_METMP|UNCHARACTERIZED solute-binding protein MMP1652|Methanococcus maripaludis (strain

Query: 1 PNPDPC 6
PN DPC
Sbjct: 141 PNDDPC 146


>sp|WTPA_METJA|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PNPDPC 6
PN DPC
Sbjct: 155 PNDDPC 160


>sp|PUS10_METKA|TRNA pseudouridine synthase Pus10|Methanopyrus kandleri (strain AV19 /

Query: 1 PNPDPC 6
P P+PC
Sbjct: 75 PEPEPC 80


>sp|GSA_HALLT|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 NPDPCCS 8
+PD CC+
Sbjct: 364 DPDACCA 370


>sp|GLNA_HALSA|GLUTAMINE synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 2 NPDPCCS 8
+PDP C+
Sbjct: 346 SPDPSCN 352


>sp|CAS4_PYRCJ|CRISPR-ASSOCIATED exonuclease Cas4|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 NPDPCCSMI 10
+P P CS++
Sbjct: 5 SPKPLCSVV 13


>sp|GLNA_METVO|GLUTAMINE synthetase|Methanococcus voltae

Query: 3 PDPCCS 8
PDP C+
Sbjct: 340 PDPACN 345


>sp|TMPS_METJA|THYMIDYLATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NPDPCCSM 9
NP P CS+
Sbjct: 147 NPKPFCSL 154


>sp|GLNA_METMP|GLUTAMINE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 3 PDPCCS 8
PDP C+
Sbjct: 340 PDPACN 345


>sp|PYRI_METHJ|ASPARTATE carbamoyltransferase regulatory chain|Methanospirillum hungatei

Query: 3 PDPCC 7
P+PCC
Sbjct: 114 PNPCC 118


>sp|P936_METJA|PHOSPHODIESTERASE MJ0936|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NPDPCCSMI 10
NP CC +
Sbjct: 136 NPGECCGYL 144


>sp|NADA_METB6|QUINOLINATE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 PNPDPCCSM 9
P D CC M
Sbjct: 81 PAADACCPM 89




57|SequenceR|290|281|IKHIPPNPDP

>sp|CSG_METMA|MAJOR S-layer protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KHIPPNPD 9
K+IP NPD
Sbjct: 126 KYIPINPD 133


>sp|CSG_METAC|MAJOR S-layer protein|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KHIPPNPD 9
K+IP NPD
Sbjct: 126 KYIPINPD 133


Query: 2 KHIPPNPD 9
++IP NPD
Sbjct: 403 EYIPINPD 410


>sp|NADE_HYPBU|NH(3)-DEPENDENT NAD(+) synthetase|Hyperthermus butylicus (strain DSM 5456

Query: 2 KHIPPNPDP 10
+ +PP PDP
Sbjct: 256 RSLPPAPDP 264


>sp|SYR_METS3|ARGININE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 5 PPNPD 9
PPNPD
Sbjct: 42 PPNPD 46


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 5 PPNPDP 10
PP PDP
Sbjct: 324 PPRPDP 329


>sp|GGR_METB6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoregula boonei (strain DSM 21154

Query: 4 IPPNP 8
IPPNP
Sbjct: 58 IPPNP 62


>sp|CETZ_PYRFU|TUBULIN-LIKE protein CetZ|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IKHIPPN 7
+KHIPP+
Sbjct: 39 LKHIPPD 45


>sp|Y1633_METJA|UNCHARACTERIZED protein MJ1633|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IKHIPPNPD 9
+ HI P+PD
Sbjct: 170 LTHINPDPD 178


>sp|RPO1C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanocaldococcus jannaschii (strain

Query: 1 IKHIPPN 7
+KHIP N
Sbjct: 196 VKHIPAN 202


>sp|GLKA_THELN|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus litoralis (strain ATCC

Query: 1 IKHIPPNP 8
I H+P NP
Sbjct: 138 IVHVPQNP 145


>sp|CETZ_PYRHO|TUBULIN-LIKE protein CetZ|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IKHIPP 6
+KHIPP
Sbjct: 39 LKHIPP 44


>sp|GLKA_THESM|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 IKHIPPNP 8
I H+P NP
Sbjct: 138 IVHVPQNP 145


>sp|Y1993_ARCFU|UNCHARACTERIZED protein AF_1993|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IKHIPPNP 8
+ + PPNP
Sbjct: 103 VNYAPPNP 110


>sp|SYFA_METMA|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IKHIPPNPDP 10
IK++ NP+P
Sbjct: 342 IKYLADNPEP 351


>sp|COFE_METJA|COENZYME F420:L-glutamate ligase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IKHIPPNPD 9
IK +P NPD
Sbjct: 123 IKILPKNPD 131


>sp|SYFA_METAC|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IKHIPPNPDP 10
IK++ NP+P
Sbjct: 339 IKYLADNPEP 348


>sp|H669_METJA|PROBABLE ATP-dependent RNA helicase MJ0669|Methanocaldococcus jannaschii

Query: 3 HIPPNPD 9
H+P NP+
Sbjct: 314 HLPQNPE 320


>sp|COFE_METM6|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C6 /

Query: 1 IKHIPPNPD 9
IK +P NPD
Sbjct: 123 IKPLPKNPD 131


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 HIPPNP 8
HIP NP
Sbjct: 412 HIPKNP 417


>sp|COFE_METMP|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IKHIPPNPD 9
IK +P NPD
Sbjct: 123 IKPLPKNPD 131


>sp|DTDA_METKA|D-AMINOACYL-TRNA deacylase|Methanopyrus kandleri (strain AV19 /

Query: 3 HIPPNPDP 10
H+P NP P
Sbjct: 92 HVPGNPTP 99


>sp|LONB_METJA|ARCHAEAL Lon protease|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KHIPPNPDP 10
KHI PN +P
Sbjct: 449 KHIVPNDEP 457


>sp|COFE_METM7|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C7 /

Query: 1 IKHIPPNPD 9
IK +P NPD
Sbjct: 123 IKPLPKNPD 131


>sp|FAEHP_METTH|BIFUNCTIONAL enzyme Fae/Hps|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 IKHIPPNPD 9
++H+P +PD
Sbjct: 386 LEHMPQDPD 394


>sp|GLNB4_METBA|NITROGEN fixation nifHD2 region GlnB-like|Methanosarcina barkeri

Query: 5 PPNPDP 10
PP PDP
Sbjct: 48 PPLPDP 53


>sp|PHR_HALSA|DEOXYRIBODIPYRIMIDINE photo-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 2 KHIPPNPDP 10
+H P PDP
Sbjct: 451 RHAPEYPDP 459


>sp|RL14E_METKA|LARGE ribosomal subunit protein eL14|Methanopyrus kandleri (strain AV19

Query: 1 IKHIPPNPD 9
IKH+ P P+
Sbjct: 52 IKHLEPTPE 60


>sp|PRIS_AERPE|DNA primase small subunit PriS|Aeropyrum pernix (strain ATCC 700893

Query: 1 IKHIPPNPD 9
++ PP+PD
Sbjct: 190 VRPAPPSPD 198


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 3 HIPPNPDP 10
HI PN +P
Sbjct: 644 HISPNRNP 651


>sp|ARLMC_PYRAB|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus abyssi (strain

Query: 1 IKHIPPN 7
I HIPP+
Sbjct: 189 IAHIPPS 195


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KHIPPNP 8
KH+P NP
Sbjct: 427 KHVPKNP 433


>sp|PYRH_METM6|URIDYLATE kinase|Methanococcus maripaludis (strain C6 /

Query: 1 IKHIPPN 7
+KH+P N
Sbjct: 90 VKHVPEN 96


>sp|RL14E_THESM|LARGE ribosomal subunit protein eL14|Thermococcus sibiricus (strain DSM

Query: 1 IKHIPPNPD 9
IKH+ P P+
Sbjct: 50 IKHLEPLPE 58


>sp|PUS10_METKA|TRNA pseudouridine synthase Pus10|Methanopyrus kandleri (strain AV19 /

Query: 5 PPNPDP 10
PP P+P
Sbjct: 74 PPEPEP 79


>sp|RL14E_THEKO|LARGE ribosomal subunit protein eL14|Thermococcus kodakarensis (strain

Query: 1 IKHIPPNPD 9
+KH+ P P+
Sbjct: 50 VKHLEPLPE 58


>sp|DCD_SACS2|DCTP deaminase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 PPNPDP 10
P NPDP
Sbjct: 52 PDNPDP 57


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 HIPPNP 8
H+P NP
Sbjct: 414 HVPENP 419


>sp|RL14E_THEGJ|LARGE ribosomal subunit protein eL14|Thermococcus gammatolerans (strain

Query: 1 IKHIPPNPD 9
+KH+ P P+
Sbjct: 50 VKHLEPLPE 58


>sp|RL14E_THEON|LARGE ribosomal subunit protein eL14|Thermococcus onnurineus (strain

Query: 1 IKHIPPNPD 9
+KH+ P P+
Sbjct: 50 VKHLEPLPE 58


>sp|DCD_SULTO|DCTP deaminase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 PPNPDP 10
P NPDP
Sbjct: 52 PDNPDP 57


>sp|RL14E_PYRFU|LARGE ribosomal subunit protein eL14|Pyrococcus furiosus (strain ATCC

Query: 1 IKHIPPNP 8
IKHI P P
Sbjct: 50 IKHIEPLP 57




58|SequenceR|295|286|SPKRVIKHIP

>sp|GSA_PYRCJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 SPKRVIKHIP 10
SP R +KH+P
Sbjct: 31 SPARALKHLP 40


>sp|GSA_PYRAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 SPKRVIKHIP 10
SP R +KH+P
Sbjct: 16 SPARALKHLP 25


>sp|GSA_PYRAE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SPKRVIKHIP 10
SP R +KH+P
Sbjct: 16 SPARALKHLP 25


>sp|RL7A_NATPD|LARGE ribosomal subunit protein eL8|Natronomonas pharaonis (strain ATCC

Query: 1 SPKRVIKHIP 10
SP+ V+ H+P
Sbjct: 56 SPEEVVMHLP 65


>sp|RL7A_HALWD|LARGE ribosomal subunit protein eL8|Haloquadratum walsbyi (strain DSM

Query: 1 SPKRVIKHIP 10
SP+ ++ H+P
Sbjct: 56 SPEEIVMHLP 65


>sp|RL7A_HALSA|LARGE ribosomal subunit protein eL8|Halobacterium salinarum (strain

Query: 1 SPKRVIKHIP 10
SP+ ++ H+P
Sbjct: 56 SPEEIVMHLP 65


>sp|RL7A_HALS3|LARGE ribosomal subunit protein eL8|Halobacterium salinarum (strain

Query: 1 SPKRVIKHIP 10
SP+ ++ H+P
Sbjct: 56 SPEEIVMHLP 65


>sp|RL7A_HALLT|LARGE ribosomal subunit protein eL8|Halorubrum lacusprofundi (strain

Query: 1 SPKRVIKHIP 10
SP+ ++ H+P
Sbjct: 56 SPEEIVMHLP 65


>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 2 PKRVIKHI 9
P R+IKH+
Sbjct: 510 PDRIIKHV 517


>sp|Y158_METJA|UPF0425 pyridoxal phosphate-dependent protein MJ0158|Methanocaldococcus

Query: 2 PKRVIKHIP 10
PK+VI ++P
Sbjct: 98 PKKVIHYLP 106


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 1 SPKRVIKHI 9
+PK ++KHI
Sbjct: 2 APKSMLKHI 10


>sp|GSA_PYRNV|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 SPKRVIKHI 9
SP R +KH+
Sbjct: 16 SPARALKHL 24


>sp|GSA_PYRIL|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 SPKRVIKHI 9
SP R +KH+
Sbjct: 16 SPARALKHL 24


>sp|KORA_METJA|2-OXOGLUTARATE synthase subunit KorA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SPKRVIKH 8
SP R +KH
Sbjct: 277 SPSRTVKH 284


>sp|KPTA_PYRFU|PROBABLE RNA 2'-phosphotransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 RVIKHIP 10
R++KH+P
Sbjct: 168 RIVKHVP 174


>sp|RPO1C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanocaldococcus jannaschii (strain

Query: 5 VIKHIP 10
V+KHIP
Sbjct: 195 VVKHIP 200


>sp|KPTA_PYRHO|PROBABLE RNA 2'-phosphotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 RVIKHIP 10
R++KH+P
Sbjct: 163 RIVKHVP 169


>sp|UPPS_PYRFU|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Pyrococcus

Query: 4 RVIKHIP 10
R+I HIP
Sbjct: 4 RIISHIP 10


>sp|RS4E_METHJ|SMALL ribosomal subunit protein eS4|Methanospirillum hungatei JF-1

Query: 4 RVIKHIP 10
R+I+HIP
Sbjct: 191 RIIEHIP 197


>sp|GATB_METS3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 3 KRVIKHIP 10
+R+I+H+P
Sbjct: 364 QRIIEHMP 371




59|SequenceR|300|291|LFLIRSPKRV

>sp|Y954_METVS|UNCHARACTERIZED solute-binding protein Mevan_0954|Methanococcus vannielii (strain

Query: 2 FLIRSPKRV 10
+LIRSPK +
Sbjct: 185 YLIRSPKSI 193


>sp|SYE_CENSY|GLUTAMATE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 LFLIRSPKRV 10
LFL+ P+R+
Sbjct: 403 LFLVGDPRRI 412


>sp|SYE_METM6|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 LFLIRSPKRV 10
F + SPK+V
Sbjct: 401 FFFVESPKKV 410


>sp|Y1059_METJA|UNCHARACTERIZED glycosyltransferase MJ1059|Methanocaldococcus jannaschii (strain

Query: 2 FLIRSPKRV 10
FLIRS KRV
Sbjct: 219 FLIRSFKRV 227




60|SequenceR|305|296|DFGDMLFLIR

>sp|PSB2_PYRHO|PROTEASOME subunit beta 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DFGDMLFLIR 10
D GD+L L+R
Sbjct: 58 DVGDILNLVR 67


>sp|PSB2_PYRFU|PROTEASOME subunit beta 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DFGDMLFLIR 10
D GD+L L+R
Sbjct: 58 DVGDILNLVR 67


>sp|RRP4_METS3|EXOSOME complex component Rrp4|Methanobrevibacter smithii (strain ATCC

Query: 1 DFGDMLFL 8
D GD+LFL
Sbjct: 108 DVGDVLFL 115


>sp|RIFK_METST|RIBOFLAVIN kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 FGDMLFL 8
FGD+LFL
Sbjct: 69 FGDVLFL 75


>sp|PSB2_PYRAB|PROTEASOME subunit beta 2|Pyrococcus abyssi (strain GE5 /

Query: 1 DFGDMLFLIR 10
D GD+L L+R
Sbjct: 58 DVGDILNLVR 67


>sp|PRIL_THEKO|DNA primase large subunit PriL|Thermococcus kodakarensis (strain ATCC

Query: 1 DFGDMLFLI 9
+FGD+L L+
Sbjct: 16 EFGDLLALL 24




61|SequenceR|310|301|AGQLEDFGDM

>sp|MFNA_METB6|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoregula boonei (strain

Query: 4 LEDFGDM 10
L DFGDM
Sbjct: 357 LSDFGDM 363


>sp|Y941_METKA|UNCHARACTERIZED methyltransferase MK0941|Methanopyrus kandleri (strain AV19 /

Query: 1 AGQLEDFG 8
+G+LEDFG
Sbjct: 142 SGRLEDFG 149


>sp|RL1_HALVD|LARGE ribosomal subunit protein uL1|Haloferax volcanii (strain ATCC

Query: 3 QLEDFGD 9
+LEDFGD
Sbjct: 83 ELEDFGD 89


>sp|ADH_SULSR|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus sp. (strain RC3)

Query: 1 AGQLEDFGD 9
AG++E+ GD
Sbjct: 71 AGKIEEMGD 79


>sp|ADH_SACS2|NAD-DEPENDENT alcohol dehydrogenase|Saccharolobus solfataricus (strain ATCC

Query: 1 AGQLEDFGD 9
AG++E+ GD
Sbjct: 71 AGKIEEVGD 79


>sp|ADH_SULTO|NAD-DEPENDENT alcohol dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 AGQLEDFGD 9
AG++E+ GD
Sbjct: 71 AGRIEEVGD 79


>sp|SYR_NATPD|ARGININE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 AGQLEDFGDM 10
AGQ E FG++
Sbjct: 100 AGQSERFGEL 109


>sp|LYSJ_PYRAE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 5 EDFGDM 10
EDFGD+
Sbjct: 253 EDFGDV 258




62|SequenceR|315|306|IHEDFAGQLE

>sp|Y104_SACS2|UNCHARACTERIZED aminotransferase SSO0104|Saccharolobus solfataricus (strain ATCC

Query: 2 HEDFAGQLE 10
HEDF ++E
Sbjct: 256 HEDFIKEME 264


>sp|Y1155_METJA|UPF0313 protein MJ1155|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HEDFAGQLE 10
HEDF G ++
Sbjct: 334 HEDFKGVIQ 342


>sp|DPHB_THEGJ|DIPHTHINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 IHEDFAGQ 8
IHEDF Q
Sbjct: 225 IHEDFGRQ 232


>sp|Y551_METJA|UNCHARACTERIZED protein MJ0551|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IHEDFAG 7
IHE+F G
Sbjct: 116 IHEEFEG 122


>sp|PFDA_METB6|PREFOLDIN subunit alpha|Methanoregula boonei (strain DSM 21154

Query: 3 EDFAGQLE 10
E FAGQLE
Sbjct: 21 EVFAGQLE 28


>sp|MPTA_THEAC|GTP cyclohydrolase MptA|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IHEDFA 6
IH+DFA
Sbjct: 32 IHDDFA 37


>sp|GATE_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfurisphaera tokodaii (strain DSM

Query: 1 IHEDFAGQLE 10
+HE++ QLE
Sbjct: 35 LHEEYHTQLE 44


>sp|COOS1_METMA|CARBON monoxide dehydrogenase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HEDFAGQL 9
HE+ AG+L
Sbjct: 144 HEEVAGEL 151


>sp|UREG_HALWD|UREASE accessory protein UreG|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IHEDFAGQLE 10
+ FAGQ+E
Sbjct: 53 LQSSFAGQIE 62


>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii (strain

Query: 1 IHEDFAGQ 8
+ EDFAG+
Sbjct: 586 VGEDFAGE 593




63|SequenceR|320|311|TCLPGIHEDF

>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 4 PGIHED 9
PG+HED
Sbjct: 431 PGVHED 436


>sp|HUTH_HALSA|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 1 TCLPGIHE 8
+C P IHE
Sbjct: 238 SCAPAIHE 245


>sp|HUTH_HALS3|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 29341

Query: 1 TCLPGIHE 8
+C P IHE
Sbjct: 238 SCAPAIHE 245


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CLPGIHE 8
CLPGI++
Sbjct: 52 CLPGIYK 58


>sp|THYX_PYRAE|FLAVIN-DEPENDENT thymidylate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 LPGIHEDF 10
LP +H DF
Sbjct: 200 LPSLHRDF 207


>sp|COAD_METMA|PHOSPHOPANTETHEINE adenylyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CLPGIHEDF 10
C P I EDF
Sbjct: 82 CGPTIEEDF 90


>sp|RTCB_PYRAE|TRNA-SPLICING ligase RtcB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 CLPGIH 7
CLPGI+
Sbjct: 54 CLPGIY 59


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 2 CLPGIH 7
CLPGI+
Sbjct: 55 CLPGIY 60


>sp|RTCB_METTH|TRNA-SPLICING ligase RtcB|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 CLPGIHE 8
CLPGI +
Sbjct: 54 CLPGIQK 60


>sp|RTCB_METMP|TRNA-SPLICING ligase RtcB|Methanococcus maripaludis (strain DSM 14266

Query: 2 CLPGIHE 8
CLPGI +
Sbjct: 52 CLPGIQK 58


>sp|Y078_METKA|UPF0285 protein MK0078|Methanopyrus kandleri (strain AV19 /

Query: 4 PGIHEDF 10
PGIH D
Sbjct: 119 PGIHRDL 125


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TCLPGIHE 8
TCLPG E
Sbjct: 30 TCLPGAVE 37


>sp|Y962_METM5|UPF0285 protein MmarC5_0962|Methanococcus maripaludis (strain C5 /

Query: 3 LPGIHED 9
+PG+H+D
Sbjct: 109 IPGLHKD 115


>sp|PUR5_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 LPGIHEDF 10
LPGI +DF
Sbjct: 137 LPGIIKDF 144


>sp|COAD_METAC|PHOSPHOPANTETHEINE adenylyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 CLPGIHEDF 10
C P + EDF
Sbjct: 82 CGPTVEEDF 90


>sp|FWDC_METMP|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanococcus

Query: 3 LPGIHED 9
+PGIH++
Sbjct: 177 MPGIHQN 183


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus

Query: 2 CLPGIHED 9
C P IHE+
Sbjct: 74 CTPKIHEN 81


>sp|HDRA_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanococcus

Query: 2 CLPGIHE 8
C P IHE
Sbjct: 71 CTPKIHE 77


>sp|HDRA_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 2 CLPGIHE 8
C P IHE
Sbjct: 70 CTPKIHE 76




64|SequenceR|325|316|AKQWDTCLPG

>sp|ILVD_METHJ|DIHYDROXY-ACID dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 AKQWDTCLPG 10
A W+T +PG
Sbjct: 37 ANSWNTIVPG 46


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 DTCLPG 10
+TCLPG
Sbjct: 29 ETCLPG 34


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 2 KQWDTCL 8
K+WD C+
Sbjct: 438 KEWDVCI 444


>sp|EF1A_METBU|ELONGATION factor 1-alpha|Methanococcoides burtonii (strain DSM 6242

Query: 2 KQWDTCLPG 10
++WD +PG
Sbjct: 275 EEWDQAVPG 283


>sp|GSA_METLZ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 6 TCLPG 10
TCLPG
Sbjct: 12 TCLPG 16


>sp|RNP2_METTH|RIBONUCLEASE P protein component 2|Methanothermobacter thermautotrophicus

Query: 4 WDTCL 8
WD+CL
Sbjct: 35 WDSCL 39


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 1 AKQWDTCL 8
A+ W+TC+
Sbjct: 357 AEAWNTCV 364


>sp|HYD1B_PYRFU|SULFHYDROGENASE 1 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KQWDTC 7
++WD+C
Sbjct: 266 RRWDSC 271




65|SequenceR|330|321|IDGREAKQWD

>sp|ILVC_METJA|KETOL-ACID reductoisomerase (NADP(+))|Methanocaldococcus jannaschii (strain

Query: 2 DGREAKQW 9
DGR AK+W
Sbjct: 284 DGRFAKEW 291


>sp|KTHY_METKA|PROBABLE thymidylate kinase|Methanopyrus kandleri (strain AV19 /

Query: 3 GREAKQWD 10
GREA +WD
Sbjct: 44 GREALEWD 51


>sp|METK_METB6|S-ADENOSYLMETHIONINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 IDGREAKQWD 10
IDGR KQ++
Sbjct: 89 IDGRATKQFN 98


>sp|THIC_SACI6|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 GREAKQWD 10
GR+A++WD
Sbjct: 361 GRKARKWD 368


>sp|THIC_SACI4|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 GREAKQWD 10
GR+A++WD
Sbjct: 361 GRKARKWD 368


>sp|THIC_SACI3|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 GREAKQWD 10
GR+A++WD
Sbjct: 361 GRKARKWD 368


>sp|THIC_SACI2|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 GREAKQWD 10
GR+A++WD
Sbjct: 361 GRKARKWD 368


>sp|THIC2_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GREAKQWD 10
GR+A++WD
Sbjct: 361 GRKARKWD 368


>sp|OTC_SULAC|ORNITHINE carbamoyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IDGREAKQWD 10
IDG ++ WD
Sbjct: 280 IDGHQSAVWD 289


>sp|CSD_AERPE|PROBABLE cysteine desulfurase|Aeropyrum pernix (strain ATCC 700893

Query: 1 IDGREAKQWD 10
+DGR +WD
Sbjct: 141 LDGRGVPRWD 150


>sp|THIC_PYRAE|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GREAKQWD 10
GR+A++WD
Sbjct: 363 GRKARRWD 370


>sp|OTC_SACS2|ORNITHINE carbamoyltransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IDGREAKQWD 10
IDG ++ WD
Sbjct: 281 IDGSKSAVWD 290


>sp|Y942_METJA|PROBABLE ATP-dependent helicase MJ0942|Methanocaldococcus jannaschii (strain

Query: 1 IDGREAKQ 8
+DG+EAK+
Sbjct: 499 MDGKEAKE 506


>sp|G3PP_PYRHO|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DGREAKQWD 10
DG KQW+
Sbjct: 118 DGNPVKQWE 126


>sp|FLPA_METTH|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanothermobacter

Query: 3 GREAKQWD 10
GRE + WD
Sbjct: 41 GREYRVWD 48


>sp|G3PP_PYRAB|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 2 DGREAKQWD 10
DG KQW+
Sbjct: 118 DGNPVKQWE 126


>sp|LEUC1_ARCFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Archaeoglobus fulgidus (strain ATCC

Query: 1 IDGREAKQWD 10
I G +AK WD
Sbjct: 48 ILGSDAKVWD 57


>sp|RS3A_METHJ|SMALL ribosomal subunit protein eS1|Methanospirillum hungatei JF-1

Query: 1 IDGREAKQW 9
+DG +AK W
Sbjct: 11 VDGWKAKSW 19


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GREAKQW 9
G E+KQW
Sbjct: 147 GEESKQW 153


>sp|FLPA_METAC|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanosarcina acetivorans

Query: 1 IDGREAKQWD 10
++G E + WD
Sbjct: 40 VEGAEYRTWD 49


>sp|G3PP_PYRFU|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DGREAKQWD 10
DG KQW+
Sbjct: 120 DGNPIKQWE 128


>sp|OTC_SULTO|ORNITHINE carbamoyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IDGREAKQWD 10
IDG ++ WD
Sbjct: 280 IDGPKSAVWD 289


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 GREAKQW 9
GREAK W
Sbjct: 465 GREAKWW 471


>sp|OTC_PYRAE|ORNITHINE carbamoyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IDGREAKQWD 10
IDG ++ WD
Sbjct: 278 IDGPQSAVWD 287


>sp|OTC_PYRCJ|ORNITHINE carbamoyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 IDGREAKQWD 10
IDG ++ WD
Sbjct: 278 IDGPQSAVWD 287


>sp|FLPA_METMA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanosarcina mazei (strain

Query: 1 IDGREAKQWD 10
++G E + WD
Sbjct: 40 VEGDEYRTWD 49


>sp|NSR_PYRAB|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus abyssi (strain GE5

Query: 2 DGREAKQWD 10
DG ++ +WD
Sbjct: 100 DGEKSYEWD 108


>sp|ILVC_METAR|KETOL-ACID reductoisomerase (NADP(+))|Methanocella arvoryzae (strain DSM 22066

Query: 2 DGREAKQW 9
DGR A++W
Sbjct: 284 DGRFAREW 291


>sp|FLPA_METMZ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanosarcina mazei

Query: 1 IDGREAKQWD 10
++G E + WD
Sbjct: 40 VEGDEYRTWD 49


>sp|G3PP_METJA|GLYCERALDEHYDE 3-phosphate phosphatase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 DGREAKQWD 10
DG KQW+
Sbjct: 118 DGLTIKQWE 126


>sp|FLPA_METKA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanopyrus kandleri (strain

Query: 2 DGREAKQWD 10
DG+E + W+
Sbjct: 47 DGKEYRVWE 55


>sp|OTC_PYRIL|ORNITHINE carbamoyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 IDGREAKQWD 10
IDG ++ WD
Sbjct: 278 IDGPQSVVWD 287




66|SequenceR|335|326|LSSLLIDGRE

>sp|GLYA_CALMQ|SERINE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 1 LSSLLIDGRE 10
+ ++LIDG+E
Sbjct: 384 MKAILIDGKE 393


>sp|CCA_PYRIL|CCA-ADDING enzyme|Pyrobaculum islandicum (strain DSM 4184

Query: 3 SLLIDGRE 10
SLL+DG E
Sbjct: 109 SLLVDGYE 116


>sp|Y1542_METJA|UNCHARACTERIZED protein MJ1542|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SLLIDGRE 10
S LIDG+E
Sbjct: 222 STLIDGKE 229


>sp|KDPQ_HALS3|PROBABLE Kdp system regulatory protein|Halobacterium salinarum (strain

Query: 1 LSSLLIDGR 9
LSS+L+D R
Sbjct: 28 LSSILVDPR 36




67|SequenceR|340|331|LKKRILSSLL

>sp|Y1268_ARCFU|UNCHARACTERIZED protein AF_1268|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LKKRILSSLL 10
L++RILSSL
Sbjct: 119 LRRRILSSLF 128


>sp|ACKA_METAC|ACETATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LKKRILSSL 9
++KRILS L
Sbjct: 339 IRKRILSGL 347


>sp|MPGS_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LKKRILSSLL 10
LK+RIL+ L+
Sbjct: 341 LKRRILNDLI 350




68|SequenceR|345|336|SAEPLLKKRI

>sp|Y096_PYRAR|PROTEIN Pars_0096|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 SAEPLLKKR 9
S EPLLK R
Sbjct: 166 SVEPLLKSR 174


>sp|DNLI_METS3|DNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 EPLLKKR 9
EPLLK+R
Sbjct: 349 EPLLKRR 355


>sp|PURL_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 AEPLLKKRI 10
A+P KKR+
Sbjct: 228 ADPFTKKRV 236


>sp|PURL_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 AEPLLKKRI 10
A+P KKR+
Sbjct: 228 ADPFTKKRV 236


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SAEPLLKK 8
+AEP++KK
Sbjct: 879 NAEPVMKK 886


>sp|Y062_PYRCJ|PROTEIN Pcal_0062|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 EPLLKKR 9
EPLLK R
Sbjct: 166 EPLLKSR 172


>sp|Y875_PYRAE|PROTEIN PAE0875|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 EPLLKKR 9
EPLLK R
Sbjct: 167 EPLLKSR 173




69|SequenceR|350|341|TTILLSAEPL

>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 2 TILLSAEP 9
T+LL AEP
Sbjct: 452 TLLLDAEP 459




70|SequenceR|355|346|LAVPRTTILL

>sp|DNLJ_HALWD|DNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LAVPRTT 7
L+VPRTT
Sbjct: 676 LSVPRTT 682


>sp|REG9_PYRFU|UNCHARACTERIZED HTH-type transcriptional regulator PF0250|Pyrococcus furiosus

Query: 1 LAVPRTTI 8
L +PRTT+
Sbjct: 31 LGIPRTTV 38


>sp|REG9_PYRAB|UNCHARACTERIZED HTH-type transcriptional regulator PYRAB16920|Pyrococcus abyssi

Query: 1 LAVPRTTI 8
L +PRTT+
Sbjct: 31 LGIPRTTV 38


>sp|Y1383_METJA|UNCHARACTERIZED protein MJ1383|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LAVPRTTI 8
LAVPRT +
Sbjct: 221 LAVPRTVL 228


>sp|REG9_PYRHO|UNCHARACTERIZED HTH-type transcriptional regulator PH1916|Pyrococcus horikoshii

Query: 1 LAVPRTTI 8
L +PRTT+
Sbjct: 31 LGIPRTTV 38




71|SequenceR|360|351|HQLKELAVPR

>sp|ENO_NATPD|ENOLASE pharaonis (strain ATCC 35678

Query: 2 QLKELAVPR 10
Q +ELAVPR
Sbjct: 59 QARELAVPR 67


>sp|Y903_METJA|UNCHARACTERIZED protein MJ0903|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HQLKELAVP 9
HQ+KE+ VP
Sbjct: 478 HQIKEINVP 486


>sp|LADH_METM5|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 1 HQLKELAVPR 10
H LK++ VPR
Sbjct: 181 HVLKQMDVPR 190


>sp|LADH_METMP|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 HQLKELAVPR 10
H LK++ +PR
Sbjct: 181 HVLKQMDIPR 190


>sp|LADH_METM7|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 1 HQLKELAVPR 10
H LK++ +PR
Sbjct: 181 HVLKQMDIPR 190


>sp|GCSPB_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 QLKELAVPR 10
Q+KE+ +P+
Sbjct: 36 QIKEMKIPK 44


>sp|SRP54_PYRHO|SIGNAL recognition particle 54 kDa|Pyrococcus horikoshii (strain ATCC

Query: 1 HQLKELAVP 9
HQLK+L P
Sbjct: 145 HQLKQLLDP 153




72|SequenceR|365|356|PHDLLHQLKE

>sp|Y070_ARCFU|UNCHARACTERIZED protein AF_0070|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PHDLLHQLKE 10
P DLLHQ+ E
Sbjct: 265 PLDLLHQIAE 274


>sp|DPCKG_HALMA|GTP-DEPENDENT dephospho-CoA kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PHDLLHQLKE 10
P DL H+LKE
Sbjct: 9 PSDLRHELKE 18


>sp|KORB_ARCFU|2-OXOGLUTARATE synthase subunit KorB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PHDLLHQLKE 10
P DLL LKE
Sbjct: 209 PADLLKHLKE 218


>sp|HIS8_PYRFU|HISTIDINOL-PHOSPHATE aminotransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PHDLLHQLKE 10
P+DL QLKE
Sbjct: 29 PYDLPPQLKE 38


>sp|ECFA_METTH|ENERGY-COUPLING factor transporter ATP-binding protein|Methanothermobacter

Query: 2 HDLLHQLKE 10
H+LLH LKE
Sbjct: 302 HELLHALKE 310


>sp|YTF2_SACSH|TFIIB-TYPE zinc finger protein|Saccharolobus shibatae (strain ATCC 51178

Query: 5 LHQLKE 10
LHQLKE
Sbjct: 131 LHQLKE 136


>sp|RFCL_METTP|REPLICATION factor C large subunit|Methanothrix thermoacetophila (strain DSM

Query: 1 PHDLLHQLKE 10
P DL+H + E
Sbjct: 255 PEDLIHWIDE 264


>sp|BIOB_METVS|BIOTIN synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 DLLHQLKE 10
DLL++LKE
Sbjct: 217 DLLYELKE 224


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PHDLLHQLKE 10
P +++H++KE
Sbjct: 587 PAEIIHEMKE 596


>sp|PDXS_HALLT|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Halorubrum lacusprofundi (strain

Query: 1 PHDLLHQLKE 10
P DL+H+ E
Sbjct: 200 PRDLVHETAE 209


>sp|SYFA_METJA|PHENYLALANINE--TRNA ligase alpha subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PHDLLHQLKE 10
P DLL ++KE
Sbjct: 290 PEDLLSKVKE 299


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 PHDLLHQLKE 10
P +++H++KE
Sbjct: 587 PAEIIHEMKE 596


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 PHDLLHQLKE 10
P +++H++KE
Sbjct: 587 PAEIIHEMKE 596


>sp|RFCL_METAC|REPLICATION factor C large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 PHDLLHQLKE 10
P DL+H + E
Sbjct: 263 PEDLVHWIDE 272


>sp|RFCL_METBF|REPLICATION factor C large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 PHDLLHQLKE 10
P DL+H + E
Sbjct: 258 PEDLVHWIDE 267


>sp|GCH3_METTH|GTP cyclohydrolase III|Methanothermobacter thermautotrophicus (strain

Query: 2 HDLLHQLKE 10
+DL+H +KE
Sbjct: 241 YDLVHVMKE 249


>sp|PURT_METJA|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocaldococcus

Query: 1 PHDLLHQLKE 10
PH++ +LKE
Sbjct: 235 PHNMSAELKE 244


>sp|RFCL_METMA|REPLICATION factor C large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PHDLLHQLKE 10
P DL+H + E
Sbjct: 263 PEDLVHWIDE 272


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 HDLLHQLKE 10
+DLL +LKE
Sbjct: 674 YDLLEKLKE 682


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 HDLLH 6
HDLLH
Sbjct: 849 HDLLH 853


>sp|PYRB_METPE|ASPARTATE carbamoyltransferase catalytic subunit|Methanosphaerula palustris

Query: 1 PHDLLHQLKE 10
P L+H+L+E
Sbjct: 187 PSGLVHELRE 196


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 HDLLH 6
HDLLH
Sbjct: 199 HDLLH 203




73|SequenceR|370|361|IEVHRPHDLL

>sp|DGGGP_THEKO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IEVHRPHDLL 10
IE+ RPH+ L
Sbjct: 7 IEITRPHNCL 16


>sp|KORA_METTH|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter thermautotrophicus

Query: 2 EVHRPHDLL 10
E+HRP ++L
Sbjct: 360 EIHRPEEIL 368


>sp|KORA_METTM|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter marburgensis (strain ATCC

Query: 2 EVHRPHDLL 10
E+HRP ++L
Sbjct: 360 EIHRPDEIL 368


>sp|AMYA_METJA|PUTATIVE alpha-amylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EVHRPHDL 9
EVH+PH L
Sbjct: 8 EVHQPHRL 15


>sp|RIFK_METBU|RIBOFLAVIN kinase|Methanococcoides burtonii (strain DSM 6242

Query: 4 HRPHDLL 10
H PHDLL
Sbjct: 186 HYPHDLL 192


>sp|Y22A_METJA|UNCHARACTERIZED protein MJ0226.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IEVHRPHD 8
I ++RPHD
Sbjct: 81 ININRPHD 88


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IEVHRPH 7
IE+HRP+
Sbjct: 494 IELHRPY 500


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IEVHRPH 7
IE+HRP+
Sbjct: 494 IELHRPY 500


>sp|DGGGP_PYRFU|DIGERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IEVHRPHDLL 10
IE+ RPH+ +
Sbjct: 7 IEIMRPHNCI 16


>sp|DGGGP_PYRAB|DIGERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 IEVHRPHDLL 10
IE+ RPH+ +
Sbjct: 7 IEIMRPHNCI 16


>sp|DGGGP_THEON|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus onnurineus (strain NA1)

Query: 1 IEVHRPHDLL 10
IE+ RPH+ +
Sbjct: 7 IEITRPHNCI 16


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 IEVHRPH 7
IE+HRP+
Sbjct: 494 IELHRPY 500


>sp|Y1426_METTH|UPF0284 protein MTH_1426|Methanothermobacter thermautotrophicus (strain

Query: 4 HRPHDL 9
H PHDL
Sbjct: 191 HNPHDL 196


>sp|IDI2_METBU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcoides burtonii (strain DSM 6242

Query: 1 IEVHRPHD 8
+EV+R HD
Sbjct: 224 VEVYRAHD 231


>sp|KORA_METJA|2-OXOGLUTARATE synthase subunit KorA|Methanocaldococcus jannaschii (strain ATCC

Query: 2 EVHRPHDL 9
E+HRP +L
Sbjct: 353 ELHRPEEL 360


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IEVHRPH 7
+E+HRP+
Sbjct: 494 VELHRPY 500


>sp|DGGGP_PYRHO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IEVHRPHDLL 10
+E+ RPH+ +
Sbjct: 7 VEIMRPHNCI 16


>sp|DGGGP_THEGJ|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 IEVHRPHD 8
+E+ RPH+
Sbjct: 7 VEITRPHN 14


>sp|MAP2_PYRHO|METHIONINE aminopeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VHRPHD 8
++RPHD
Sbjct: 169 IYRPHD 174


>sp|MAP2_PYRFU|METHIONINE aminopeptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VHRPHD 8
++RPHD
Sbjct: 169 IYRPHD 174


>sp|MAP2_PYRAB|METHIONINE aminopeptidase|Pyrococcus abyssi (strain GE5 /

Query: 3 VHRPHD 8
++RPHD
Sbjct: 169 IYRPHD 174


>sp|TRPCD_ARCFU|TRYPTOPHAN biosynthesis protein TrpCD|Archaeoglobus fulgidus (strain ATCC

Query: 1 IEVHRPHDLL 10
+EVH DL+
Sbjct: 132 VEVHHAEDLV 141


>sp|TRPC_HALSA|INDOLE-3-GLYCEROL phosphate synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 IEVHRPHDL 9
+EVH P +L
Sbjct: 158 VEVHSPREL 166


>sp|PDXT_METB6|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanoregula boonei (strain

Query: 1 IEVHRPHDL 9
IEV P DL
Sbjct: 35 IEVRNPEDL 43


>sp|MPTA_NATPD|GTP cyclohydrolase MptA|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IEVHRPHD 8
+++HRP+D
Sbjct: 31 VKLHRPND 38




74|SequenceR|375|366|ESFGLIEVHR

>sp|COFH_METM6|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C6 /

Query: 1 ESFGLIEVH 9
ESFG I+VH
Sbjct: 127 ESFGKIDVH 135


>sp|Y693_METJA|UNCHARACTERIZED protein MJ0693|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SFGLIEVHR 10
+F L+EVHR
Sbjct: 65 AFDLLEVHR 73


>sp|COFH_HALSA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Halobacterium salinarum (strain ATCC

Query: 2 SFGLIEVHR 10
+FGL E HR
Sbjct: 146 AFGLNEAHR 154


>sp|Y967_METTH|PUTATIVE HTH-type transcriptional regulatory protein|Methanothermobacter

Query: 3 FGLIEVHR 10
FG+IE H+
Sbjct: 213 FGMIETHK 220


>sp|WECC_PYRHO|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ESFGLIEVHR 10
E FGLI + R
Sbjct: 272 EDFGLIRIAR 281


>sp|ARGC_METTH|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 FGLIEVHR 10
+GL E+HR
Sbjct: 123 YGLPEIHR 130


>sp|ARGC_ARCFU|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FGLIEVHR 10
+GL E+HR
Sbjct: 123 YGLTELHR 130


>sp|LYSY_PYRHO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 FGLIEVHR 10
+GL E+HR
Sbjct: 121 YGLPEIHR 128


>sp|LYSY_CALMQ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 SFGLIEVHR 10
++GL E+HR
Sbjct: 131 AYGLPELHR 139


>sp|LYSY_CENSY|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 FGLIEVHR 10
FG+ E+HR
Sbjct: 128 FGIPELHR 135


>sp|LYSY_PYRFU|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 SFGLIEVHR 10
++GL E+HR
Sbjct: 120 TYGLPELHR 128


>sp|ARGC_METMA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 FGLIEVH 9
+GL+E+H
Sbjct: 128 YGLVELH 134


>sp|ARGC_METBF|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina barkeri (strain Fusaro /

Query: 3 FGLIEVH 9
+GL+E+H
Sbjct: 125 YGLVELH 131


>sp|ARGC_METJA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SFGLIEVHR 10
++GL E+HR
Sbjct: 127 AYGLPELHR 135




75|SequenceR|380|371|EKRKAESFGL

>sp|Y2236_ARCFU|UNCHARACTERIZED protein AF_2236|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EKRKAESFGL 10
E RKA+ FG+
Sbjct: 111 EDRKAKIFGI 120


Query: 1 EKRKAESFGL 10
EK+ A SFG+
Sbjct: 184 EKQAAVSFGI 193


>sp|PSA_SACI7|PROTEASOME subunit alpha|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 EKRKAESF 8
EKRKA+S
Sbjct: 53 EKRKAQSL 60


>sp|PSA_SACI6|PROTEASOME subunit alpha|Saccharolobus islandicus (strain M.16.4 /

Query: 1 EKRKAESF 8
EKRKA+S
Sbjct: 53 EKRKAQSL 60


>sp|PSA_SACI4|PROTEASOME subunit alpha|Saccharolobus islandicus (strain M.14.25 /

Query: 1 EKRKAESF 8
EKRKA+S
Sbjct: 53 EKRKAQSL 60


>sp|PSA_SACI3|PROTEASOME subunit alpha|Saccharolobus islandicus (strain M.16.27)

Query: 1 EKRKAESF 8
EKRKA+S
Sbjct: 53 EKRKAQSL 60


>sp|PSA_SACI2|PROTEASOME subunit alpha|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 EKRKAESF 8
EKRKA+S
Sbjct: 53 EKRKAQSL 60


>sp|PSA_SACI1|PROTEASOME subunit alpha|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 EKRKAESF 8
EKRKA+S
Sbjct: 53 EKRKAQSL 60


>sp|PSA_SACS2|PROTEASOME subunit alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EKRKAESF 8
EKRKA+S
Sbjct: 53 EKRKAQSL 60


>sp|CBIHC_ARCFU|COBALAMIN biosynthesis protein CbiHC|Archaeoglobus fulgidus (strain ATCC

Query: 1 EKRKAESFG 9
EKR+AE G
Sbjct: 251 EKRRAERMG 259


>sp|PURP_ARCFU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Archaeoglobus fulgidus (strain ATCC

Query: 1 EKRKAESFGL 10
EK+ ESFG+
Sbjct: 52 EKKVYESFGV 61


>sp|FPRA_METAZ|COENZYME F420H(2) oxidase|Methanobrevibacter arboriphilus

Query: 2 KRKAESFG 9
KRKA +FG
Sbjct: 348 KRKAVTFG 355


>sp|VPB21_SULTO|PUTATIVE antitoxin VapB21|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EKRKAESFG 9
EKR+ ESF
Sbjct: 18 EKREGESFS 26




76|SequenceR|385|376|YKFFYEKRKA

>sp|ENO_METST|ENOLASE stadtmanae (strain ATCC 43021

Query: 1 YKFFY 5
YKFFY
Sbjct: 275 YKFFY 279


>sp|Y1598_METJA|UPF0284 protein MJ1598|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KFFYEKRK 9
KF++EK K
Sbjct: 294 KFYFEKAK 301


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KFFYEKRK 9
K+F EKRK
Sbjct: 832 KYFSEKRK 839


>sp|MTM2_METJA|TYPE II methyltransferase M.MjaII|Methanocaldococcus jannaschii

Query: 2 KFFYEKRK 9
K F+EKRK
Sbjct: 69 KLFFEKRK 76




77|SequenceR|390|381|AEDSFYKFFY

>sp|Y811_METJA|UNCHARACTERIZED protein MJ0811|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AEDSFYKFF 9
AED+FY FF
Sbjct: 43 AEDTFYAFF 51


>sp|RL15E_THEAC|LARGE ribosomal subunit protein eL15|Thermoplasma acidophilum (strain

Query: 1 AEDSFYKFF 9
ED YK+F
Sbjct: 123 GEDGLYKYF 131


>sp|RL15E_SULAC|LARGE ribosomal subunit protein eL15|Sulfolobus acidocaldarius (strain

Query: 1 AEDSFYKFF 9
AED YK++
Sbjct: 120 AEDGMYKYY 128


>sp|RS17_METTH|SMALL ribosomal subunit protein uS17|Methanothermobacter

Query: 2 EDSFYKF 8
E SFYKF
Sbjct: 47 ERSFYKF 53


>sp|Y934_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ0934|Methanocaldococcus jannaschii

Query: 2 EDSFYKFF 9
E+ FYK F
Sbjct: 5 EEEFYKIF 12


>sp|Y033_METJA|UNCHARACTERIZED FAD-dependent oxidoreductase MJ0033|Methanocaldococcus jannaschii

Query: 2 EDSFYKFFY 10
+DSF K FY
Sbjct: 54 KDSFKKHFY 62


>sp|RL15E_THEON|LARGE ribosomal subunit protein eL15|Thermococcus onnurineus (strain NA1)

Query: 1 AEDSFYKFF 9
ED YK+F
Sbjct: 120 GEDGMYKWF 128


>sp|RL15E_THEKO|LARGE ribosomal subunit protein eL15|Thermococcus kodakarensis (strain

Query: 1 AEDSFYKFF 9
ED YK+F
Sbjct: 120 GEDGMYKWF 128


>sp|RL15E_THEGJ|LARGE ribosomal subunit protein eL15|Thermococcus gammatolerans (strain

Query: 1 AEDSFYKFF 9
ED YK+F
Sbjct: 120 GEDGMYKWF 128


>sp|RL15E_PYRHO|LARGE ribosomal subunit protein eL15|Pyrococcus horikoshii (strain ATCC

Query: 1 AEDSFYKFF 9
ED YK+F
Sbjct: 120 GEDGMYKWF 128


>sp|RL15E_PYRFU|LARGE ribosomal subunit protein eL15|Pyrococcus furiosus (strain ATCC

Query: 1 AEDSFYKFF 9
ED YK+F
Sbjct: 120 GEDGMYKWF 128


>sp|RL15E_PYRAB|LARGE ribosomal subunit protein eL15|Pyrococcus abyssi (strain GE5 /

Query: 1 AEDSFYKFF 9
ED YK+F
Sbjct: 120 GEDGMYKWF 128


>sp|RL15E_PYRAE|LARGE ribosomal subunit protein eL15|Pyrobaculum aerophilum (strain ATCC

Query: 1 AEDSFYKFF 9
A+D Y++F
Sbjct: 122 ADDGIYRYF 130


>sp|NPD1_PYRAE|NAD-DEPENDENT protein deacetylase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AEDSFYKFF 9
A++++Y FF
Sbjct: 221 ADETYYDFF 229


>sp|Y942_METJA|PROBABLE ATP-dependent helicase MJ0942|Methanocaldococcus jannaschii (strain

Query: 3 DSFYKFF 9
DSFYK+
Sbjct: 472 DSFYKYL 478


>sp|AATC_ARCFU|A-TYPE ATP synthase subunit C|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EDSFYKFFY 10
ED YK +Y
Sbjct: 176 EDGLYKVYY 184


>sp|Y1062_METJA|UNCHARACTERIZED protein MJ1062|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 YKFFY 10
YKFFY
Sbjct: 357 YKFFY 361


>sp|RL15E_METS5|LARGE ribosomal subunit protein eL15|Metallosphaera sedula (strain ATCC

Query: 1 AEDSFYKFF 9
AED YK++
Sbjct: 120 AEDGKYKYY 128


>sp|HEMH_THEAC|FERROCHELATASE acidophilum (strain ATCC 25905

Query: 1 AEDSFYKF 8
+EDSFY F
Sbjct: 157 SEDSFYLF 164


>sp|T1SX_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 3 DSFYKFFY 10
D+F+ F+Y
Sbjct: 336 DNFFVFYY 343




78|SequenceR|395|386|AARAQAEDSF

>sp|ILVE_METTH|PUTATIVE branched-chain-amino-acid aminotransferase|Methanothermobacter

Query: 3 RAQAEDSF 10
RA+ EDSF
Sbjct: 293 RAETEDSF 300




79|SequenceR|400|391|QILSFAARAQ

***** No hits found ******


80|SequenceR|405|396|LVENEQILSF

>sp|Y3856_METAC|UPF0285 protein MA_3856|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LVENEQILSF 10
L+E+E++L+F
Sbjct: 17 LIEDEKVLTF 26


>sp|Y679_METMA|UPF0285 protein MM_0679|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LVENEQILSF 10
L+E E++L+F
Sbjct: 17 LIEGEKVLTF 26


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 3 ENEQILS 9
ENEQIL+
Sbjct: 630 ENEQILA 636


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 3 ENEQILS 9
ENEQIL+
Sbjct: 630 ENEQILA 636


>sp|PURQ_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Picrophilus torridus (strain ATCC 700027

Query: 1 LVENEQIL 8
L+EN+QI+
Sbjct: 168 LIENDQII 175




81|SequenceR|410|401|FCMTFLVENE

>sp|T2MT_METTF|TYPE II restriction enzyme MthTI|Methanothermobacter

Query: 1 FCMTFLVENE 10
FC TF +EN+
Sbjct: 47 FCNTFDIENK 56


>sp|NASB_HALMT|PROBABLE nitrate transporter|Haloferax mediterranei (strain ATCC 33500

Query: 1 FCMTFLV 7
CMTF+V
Sbjct: 304 LCMTFIV 310


>sp|PYRI_SULAC|ASPARTATE carbamoyltransferase regulatory chain|Sulfolobus acidocaldarius

Query: 1 FCMTFLVENE 10
+C T + ENE
Sbjct: 144 YCETIIDENE 153




82|SequenceR|415|406|CVLPIFCMTF

>sp|TRPA_HALSA|TRYPTOPHAN synthase alpha chain|Halobacterium salinarum (strain ATCC 700922

Query: 3 LPIFCMTF 10
+P+ CMT+
Sbjct: 89 VPVVCMTY 96


>sp|TRPA_HALS3|TRYPTOPHAN synthase alpha chain|Halobacterium salinarum (strain ATCC 29341

Query: 3 LPIFCMTF 10
+P+ CMT+
Sbjct: 89 VPVVCMTY 96


>sp|TRPA_METBF|TRYPTOPHAN synthase alpha chain|Methanosarcina barkeri (strain Fusaro /

Query: 3 LPIFCMTF 10
+P+ CMT+
Sbjct: 94 IPLVCMTY 101


>sp|MOAA_AERPE|PROBABLE GTP 3',8-cyclase|Aeropyrum pernix (strain ATCC 700893

Query: 4 PIFCM 8
P+FCM
Sbjct: 249 PVFCM 253


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 LPIFC 7
LPIFC
Sbjct: 343 LPIFC 347


>sp|THII_METMA|PROBABLE tRNA sulfurtransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VLPIFCMT 9
++P++C T
Sbjct: 222 IIPVYCNT 229


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 1 CVLPIFCM 8
C++P CM
Sbjct: 695 CMIPKLCM 702


>sp|DHYS1_ARCFU|PROBABLE deoxyhypusine synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LPIFCMTF 10
+P+FC T
Sbjct: 172 IPVFCPTL 179


>sp|DGGGP_METLZ|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 LPIFCMTF 10
LP+F +TF
Sbjct: 157 LPLFAITF 164




83|SequenceR|420|411|TCVIWCVLPI

>sp|SUHB_AERPE|INOSITOL-1-MONOPHOSPHATASE pernix (strain ATCC 700893

Query: 1 TCVIWCVLPI 10
+C+ WC + +
Sbjct: 94 SCITWCSVSV 103


>sp|SRP19_ARCFU|SIGNAL recognition particle 19 kDa|Archaeoglobus fulgidus (strain ATCC

Query: 2 CVIWCV 7
CV+W V
Sbjct: 4 CVVWTV 9


>sp|Y934_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ0934|Methanocaldococcus jannaschii

Query: 2 CVIWCVLPI 10
CV++C +PI
Sbjct: 105 CVLFCPIPI 113




84|SequenceR|425|416|QQKLGTCVIW

>sp|AMPPA_THESM|AMP phosphorylase|Thermococcus sibiricus (strain DSM 12597

Query: 2 QKLGTCVIW 10
+K+G C++W
Sbjct: 225 EKIGACLVW 233


>sp|AMPPA_PYRHO|AMP phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 QKLGTCVIW 10
+K+G C++W
Sbjct: 225 EKIGACLVW 233


>sp|AMPPA_PYRFU|AMP phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 QKLGTCVIW 10
+K+G C++W
Sbjct: 225 EKIGACLVW 233


>sp|AMPPA_PYRAB|AMP phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 2 QKLGTCVIW 10
+K+G C++W
Sbjct: 225 EKIGACLVW 233


>sp|AMPPA_THEON|AMP phosphorylase|Thermococcus onnurineus (strain NA1)

Query: 2 QKLGTCVIW 10
+K+G C++W
Sbjct: 225 EKIGACMVW 233


>sp|AMPPA_THEKO|AMP phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 QKLGTCVIW 10
+K+G C++W
Sbjct: 225 EKVGACLVW 233


>sp|AMPPA_THEGJ|AMP phosphorylase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 QKLGTCVIW 10
+K+G C++W
Sbjct: 225 EKVGACLVW 233


>sp|Y956_METJA|UNCHARACTERIZED protein MJ0956|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 GTCVIW 10
G+CV+W
Sbjct: 93 GSCVVW 98


>sp|AMPPA_METAR|AMP phosphorylase|Methanocella arvoryzae (strain DSM 22066

Query: 3 KLGTCVIW 10
K+G C++W
Sbjct: 226 KVGGCLVW 233


>sp|AROE_ARCFU|SHIKIMATE dehydrogenase (NADP(+))|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QKLGTCVIW 10
++ G C+ W
Sbjct: 157 RRYGECIFW 165


>sp|TET_PYRHO|TETRAHEDRAL aminopeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KLGTCVIW 10
K+GT + W
Sbjct: 157 KIGTVITW 164




85|SequenceR|430|421|KGSEMQQKLG

>sp|RL24_THEPD|LARGE ribosomal subunit protein uL24|Thermofilum pendens (strain DSM

Query: 3 SEMQQKLG 10
+E+QQKLG
Sbjct: 35 AELQQKLG 42


>sp|QUEC_METJA|7-CYANO-7-DEAZAGUANINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GSEMQQKLG 10
G+E+++KLG
Sbjct: 177 GAELEKKLG 185


>sp|TRM1_PYRHO|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus horikoshii

Query: 1 KGSEMQQKLG 10
KG E +KLG
Sbjct: 242 KGDETLEKLG 251


>sp|SYY_NANEQ|TYROSINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 GSEMQQKLG 10
GSE+ +KLG
Sbjct: 121 GSELYEKLG 129




86|SequenceR|435|426|TQALSKGSEM

>sp|TPIS_METBR|TRIOSEPHOSPHATE isomerase|Methanobacterium bryantii

Query: 4 LSKGSEM 10
L+KGSEM
Sbjct: 28 LAKGSEM 34




87|SequenceR|440|431|TTTKSTQALS

***** No hits found ******


88|SequenceR|445|436|FVYVATTTKS

>sp|RL3_ARCFU|LARGE ribosomal subunit protein uL3|Archaeoglobus fulgidus (strain ATCC

Query: 2 VYVATTTK 9
VYV+TT+K
Sbjct: 321 VYVSTTSK 328


>sp|TOP6B_METBU|TYPE 2 DNA topoisomerase 6|Methanococcoides burtonii (strain DSM 6242

Query: 3 YVATTTKS 10
++ATTT+S
Sbjct: 337 FIATTTRS 344




89|SequenceR|450|441|LSSLFFVYVA

***** No hits found ******


90|SequenceR|455|446|GRPQLLSSLF

>sp|FOLCP_HALVD|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 3 PQLLSSLF 10
P++LSS+F
Sbjct: 370 PEILSSVF 377


>sp|COXX_AERPE|PROTOHEME IX farnesyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GRPQLLSSL 9
G P+L+SSL
Sbjct: 211 GNPRLVSSL 219




91|SequenceR|460|451|HEQSGGRPQL

>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HEQSGGRPQL 10
H+ GG PQL
Sbjct: 250 HDPYGGHPQL 259


>sp|PCP_THEON|PYRROLIDONE-CARBOXYLATE peptidase|Thermococcus onnurineus (strain NA1)

Query: 3 QSGGRPQL 10
Q+GGRP +
Sbjct: 68 QAGGRPNI 75


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 1 HEQSGG--RPQL 10
H QSGG RP+L
Sbjct: 527 HMQSGGGPRPEL 538


>sp|LONH_THEVO|PUTATIVE lon protease homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HEQSGGRPQL 10
H+ GG PQL
Sbjct: 250 HDPYGGHPQL 259


>sp|PCP_THEKO|PYRROLIDONE-CARBOXYLATE peptidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 QSGGRPQL 10
Q+GGRP +
Sbjct: 68 QAGGRPNI 75


>sp|Y2262_NATPD|PUTATIVE heme-binding protein NP_2262A|Natronomonas pharaonis (strain ATCC

Query: 2 EQSGGRP 8
E SGGRP
Sbjct: 276 ESSGGRP 282


>sp|SYW_SACS2|TRYPTOPHAN--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HEQSGGRPQL 10
H + GG P++
Sbjct: 291 HRKYGGNPEI 300


>sp|RPIA_METAC|RIBOSE-5-PHOSPHATE isomerase A|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 GGRPQL 10
GG+PQL
Sbjct: 159 GGKPQL 164




92|SequenceR|465|456|HACLGHEQSG

>sp|Y540_ARCFU|UNCHARACTERIZED protein AF_0540|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HACLGHEQ 8
H+CLG+EQ
Sbjct: 59 HSCLGNEQ 66


>sp|AATA_META3|A-TYPE ATP synthase subunit A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 ACLGHEQ 8
AC+GH++
Sbjct: 374 ACMGHDE 380


>sp|SYC_THEGJ|CYSTEINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 ACLGHE 7
AC GHE
Sbjct: 244 ACFGHE 249


>sp|SYC_PYRHO|CYSTEINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ACLGHE 7
AC GHE
Sbjct: 244 ACFGHE 249


>sp|SYC_PYRFU|CYSTEINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ACLGHE 7
AC GHE
Sbjct: 243 ACFGHE 248


>sp|SYC_PYRAB|CYSTEINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 ACLGHE 7
AC GHE
Sbjct: 244 ACFGHE 249


>sp|TRPG_SACS2|ANTHRANILATE synthase component 2|Saccharolobus solfataricus (strain ATCC

Query: 3 CLGHEQSG 10
CLGH+ G
Sbjct: 84 CLGHQAIG 91


>sp|SYC_THEON|CYSTEINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 ACLGHE 7
AC GHE
Sbjct: 244 ACTGHE 249


>sp|SYC_THEKO|CYSTEINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 ACLGHE 7
AC GHE
Sbjct: 244 ACTGHE 249


>sp|METK_METHJ|S-ADENOSYLMETHIONINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 CLGHEQS 9
CLGH S
Sbjct: 27 CLGHPDS 33


>sp|METK_METB6|S-ADENOSYLMETHIONINE synthase|Methanoregula boonei (strain DSM 21154

Query: 3 CLGHEQS 9
CLGH S
Sbjct: 27 CLGHPDS 33


>sp|RIBL_HALJB|FAD synthase|Halalkalicoccus jeotgali (strain DSM 18796

Query: 1 HACLGHE 7
HA LGHE
Sbjct: 66 HALLGHE 72




93|SequenceR|470|461|CLGWLHACLG

>sp|DTDA_METMJ|D-AMINOACYL-TRNA deacylase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 GWLHACLG 10
W+HA LG
Sbjct: 104 AWMHAILG 111


>sp|AMPD_AERPE|ANHYDROMEVALONATE phosphate decarboxylase|Aeropyrum pernix (strain ATCC 700893

Query: 3 GWLHACLG 10
GWLHA +
Sbjct: 318 GWLHAVIA 325


>sp|Y208_METBF|UPF0285 protein Mbar_A0208|Methanosarcina barkeri (strain Fusaro /

Query: 1 CLGWLHACLG 10
CLG HA +G
Sbjct: 293 CLGKWHAAIG 302


>sp|MFNA_METKA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanopyrus kandleri

Query: 1 CLGWLHACL 9
C+GWL L
Sbjct: 54 CIGWLAETL 62


>sp|Y1623_METJA|UNCHARACTERIZED protein MJ1623|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CLGWL 5
C+GWL
Sbjct: 376 CIGWL 380


>sp|ARCH_AERPE|PROTEIN archease|Aeropyrum pernix (strain ATCC 700893

Query: 1 CLGWLH 6
C GW+H
Sbjct: 3 CGGWMH 8


>sp|NIFK_METBA|NITROGENASE molybdenum-iron protein beta chain|Methanosarcina barkeri

Query: 1 CLGWLHACL 9
CL +L CL
Sbjct: 48 CLSYLRMCL 56


>sp|PYRG_METPE|CTP synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 LGWLHAC 8
LGW AC
Sbjct: 390 LGWKDAC 396


>sp|HIS81_ARCFU|HISTIDINOL-PHOSPHATE aminotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 WLHACLG 10
W+ +C+G
Sbjct: 230 WMRSCVG 236


>sp|TRM1_METHJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanospirillum hungatei

Query: 2 LGWLHAC 8
LG++H C
Sbjct: 231 LGYIHQC 237


>sp|AROA_METVS|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus vannielii (strain ATCC

Query: 1 CLGWLHAC 8
CL HAC
Sbjct: 48 CLSSAHAC 55


>sp|AROA_METMP|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain DSM

Query: 1 CLGWLHAC 8
CL HAC
Sbjct: 48 CLSSAHAC 55


>sp|AROA_METM7|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 CLGWLHAC 8
CL HAC
Sbjct: 48 CLSSAHAC 55


>sp|AROA_METM6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 CLGWLHAC 8
CL HAC
Sbjct: 48 CLSSAHAC 55


>sp|AROA_METM5|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 CLGWLHAC 8
CL HAC
Sbjct: 48 CLSSAHAC 55


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 2 LGWLHAC 8
+G+LH C
Sbjct: 219 IGYLHRC 225


>sp|VAPC1_THEAC|RIBONUCLEASE VapC1|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LGWLHACLG 10
+ W++ C G
Sbjct: 153 IAWIYRCTG 161




94|SequenceR|475|466|DAALSCLGWL

>sp|MFNA_METKA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanopyrus kandleri

Query: 2 AALSCLGWL 10
A C+GWL
Sbjct: 50 AERECIGWL 58


>sp|Y1623_METJA|UNCHARACTERIZED protein MJ1623|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 SCLGWL 10
+C+GWL
Sbjct: 375 NCIGWL 380


>sp|TRPB_PYRAR|TRYPTOPHAN synthase beta chain|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 DAALSCLG 8
DAA++C+G
Sbjct: 240 DAAVACVG 247


>sp|PUR5_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DAALSCLGWL 10
D A +CLG+L
Sbjct: 150 DLAGTCLGYL 159


>sp|HAC8_HALAS|PRE-PROTEIN-C8 sp. (strain AS7092)

Query: 2 AALSCLGWL 10
A LSCLG++
Sbjct: 247 AGLSCLGFV 255


>sp|KCY_METMJ|CYTIDYLATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DAALSCLG 8
DAA++CL
Sbjct: 167 DAAIACLA 174


>sp|Y405_HALVD|PROBABLE cell surface fusion protein|Haloferax volcanii (strain ATCC 29605

Query: 2 AALSCLGWL 10
AAL GWL
Sbjct: 477 AALGVAGWL 485




95|SequenceR|480|471|QNWIGDAALS

>sp|RS9_METTP|SMALL ribosomal subunit protein uS9|Methanothrix thermoacetophila

Query: 3 WIGDAAL 9
W GDAAL
Sbjct: 88 WTGDAAL 94


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NWIGDAAL 9
NW GDA +
Sbjct: 910 NWTGDAEI 917


>sp|GGGPS_METMA|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 WIGDAAL 9
W+GDA L
Sbjct: 140 WVGDAKL 146


>sp|GGGPS_METS3|GERANYLGERANYLGLYCERYL phosphate synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 WIGDAAL 9
W+GDA L
Sbjct: 139 WVGDAKL 145


>sp|GGGPS_METBF|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 WIGDAAL 9
W+GDA L
Sbjct: 140 WVGDAKL 146


>sp|GGGPS_METBU|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 WIGDAAL 9
W+GDA L
Sbjct: 140 WVGDAKL 146


>sp|GGGPS_METAC|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 WIGDAAL 9
W+GDA L
Sbjct: 140 WVGDAKL 146


>sp|COFD_METJA|2-PHOSPHO-L-LACTATE transferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WIGDAALS 10
WIGD LS
Sbjct: 41 WIGDLYLS 48


>sp|KTHY_METBU|PROBABLE thymidylate kinase|Methanococcoides burtonii (strain DSM 6242

Query: 2 NWIGDA 7
+WIGDA
Sbjct: 41 SWIGDA 46


>sp|FLAE_METJA|PUTATIVE flagella-related protein E|Methanocaldococcus jannaschii (strain

Query: 3 WIGDAALS 10
W+GD AL+
Sbjct: 65 WLGDKALA 72


>sp|TRPE1_HALSA|ANTHRANILATE synthase component 1 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 NWIGDAALS 10
+W GDA L+
Sbjct: 456 SWTGDAELA 464


>sp|GGGPS_METTP|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 WIGDAAL 9
W+GDA L
Sbjct: 148 WVGDAKL 154


>sp|GGGPS_THEKO|GERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 WIGDA 7
W+GDA
Sbjct: 143 WVGDA 147


>sp|GGGPS_THEGJ|GERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 WIGDA 7
W+GDA
Sbjct: 143 WVGDA 147


>sp|GGGPS_PYRHO|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 WIGDA 7
W+GDA
Sbjct: 145 WVGDA 149


>sp|GGGPS_PYRFU|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 WIGDA 7
W+GDA
Sbjct: 142 WVGDA 146


>sp|GGGPS_PYRAB|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 WIGDA 7
W+GDA
Sbjct: 144 WVGDA 148


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain

Query: 3 WIGDAAL 9
W+G AAL
Sbjct: 29 WVGRAAL 35


>sp|RL15E_METMA|LARGE ribosomal subunit protein eL15|Methanosarcina mazei (strain ATCC

Query: 2 NWIGDAAL 9
NWI DA++
Sbjct: 149 NWICDASI 156


>sp|THYX_HALSA|FLAVIN-DEPENDENT thymidylate synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 NWIGDAAL 9
+W+GD L
Sbjct: 27 DWVGDTPL 34




96|SequenceR|485|476|EFLIKQNWIG

>sp|NIKR_METVS|PUTATIVE nickel-responsive regulator|Methanococcus vannielii (strain ATCC

Query: 1 EFLIKQNWI 9
++LIK WI
Sbjct: 41 DYLIKHKWI 49


>sp|NIKR_METMP|PUTATIVE nickel-responsive regulator|Methanococcus maripaludis (strain DSM

Query: 1 EFLIKQNWI 9
++LIK WI
Sbjct: 41 DYLIKHKWI 49


>sp|NIKR_METM7|PUTATIVE nickel-responsive regulator|Methanococcus maripaludis (strain C7

Query: 1 EFLIKQNWI 9
++LIK WI
Sbjct: 41 DYLIKHKWI 49


>sp|NIKR_METM6|PUTATIVE nickel-responsive regulator|Methanococcus maripaludis (strain C6

Query: 1 EFLIKQNWI 9
++LIK WI
Sbjct: 41 DYLIKHKWI 49


>sp|NIKR_METM5|PUTATIVE nickel-responsive regulator|Methanococcus maripaludis (strain C5

Query: 1 EFLIKQNWI 9
++LIK WI
Sbjct: 41 DYLIKHKWI 49


>sp|NIKR_METJA|PUTATIVE nickel-responsive regulator|Methanocaldococcus jannaschii (strain

Query: 1 EFLIKQNWI 9
+++IK WI
Sbjct: 41 DYIIKHKWI 49


>sp|NIKR_META3|PUTATIVE nickel-responsive regulator|Methanococcus aeolicus (strain ATCC

Query: 1 EFLIKQNWI 9
+++IK WI
Sbjct: 41 DYIIKHKWI 49


>sp|SERC_METAC|PHOSPHOSERINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 FLIKQNWI 9
F+ K NWI
Sbjct: 283 FVAKNNWI 290


>sp|Y3514_METJA|UNCHARACTERIZED protein MJECL14|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EFLIKQNWI 9
EFLIK+N +
Sbjct: 276 EFLIKRNIL 284


>sp|SERC_METMA|PHOSPHOSERINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FLIKQNWI 9
F+ K NWI
Sbjct: 283 FVAKNNWI 290


>sp|SERC_METBF|PHOSPHOSERINE aminotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 FLIKQNWI 9
F+ K NWI
Sbjct: 283 FVAKNNWI 290


>sp|Y1301_METJA|UNCHARACTERIZED ATP-binding protein MJ1301|Methanocaldococcus jannaschii (strain

Query: 1 EFLIKQNWI 9
EFLIK+N +
Sbjct: 368 EFLIKRNIL 376


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 EFLIKQNW 8
E L+K+ W
Sbjct: 374 EILVKEQW 381




97|SequenceR|490|481|RLDSEEFLIK

>sp|RL10_METVS|LARGE ribosomal subunit protein uL10|Methanococcus vannielii (strain ATCC

Query: 1 RLDSEEFLIK 10
R+D EEFL K
Sbjct: 212 RIDEEEFLGK 221


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 RLDSEEFLIK 10
R+D E F IK
Sbjct: 786 RIDDESFYIK 795


>sp|RL10_METM6|LARGE ribosomal subunit protein uL10|Methanococcus maripaludis (strain C6

Query: 1 RLDSEEFLIK 10
R+D EEF+ K
Sbjct: 212 RIDEEEFIGK 221


>sp|OGT_METAC|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LDSEEFLIK 10
LD +EFL+K
Sbjct: 143 LDIKEFLLK 151


>sp|Y780_METJA|UNCHARACTERIZED protein MJ0780|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RLDSEEFLIK 10
+LDS +F+I+
Sbjct: 266 KLDSSKFMIQ 275


>sp|GLMS_METMP|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanococcus maripaludis (strain

Query: 2 LDSEEFLIK 10
+DS EFL K
Sbjct: 325 IDSSEFLTK 333


>sp|OGT_METMA|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LDSEEFLIK 10
LD +EFL+K
Sbjct: 143 LDIKEFLLK 151


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 LDSEEFLIK 10
+D+EEF+++
Sbjct: 305 IDAEEFIVE 313




98|SequenceR|495|486|QLGHNRLDSE

>sp|SYFA_METM7|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C7 /

Query: 1 QLGHNRLDSE 10
+LG N LDSE
Sbjct: 63 ELGKNSLDSE 72




99|SequenceR|500|491|SVDAKQLGHN

>sp|DPHB_SACI7|DIPHTHINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 VDAKQLGHN 10
++AKQ GHN
Sbjct: 101 IEAKQRGHN 109


>sp|DPHB_SACI6|DIPHTHINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 VDAKQLGHN 10
++AKQ GHN
Sbjct: 101 IEAKQRGHN 109


>sp|DPHB_SACI4|DIPHTHINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 VDAKQLGHN 10
++AKQ GHN
Sbjct: 101 IEAKQRGHN 109


>sp|DPHB_SACI3|DIPHTHINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 VDAKQLGHN 10
++AKQ GHN
Sbjct: 101 IEAKQRGHN 109


>sp|DPHB_SACI2|DIPHTHINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 VDAKQLGHN 10
++AKQ GHN
Sbjct: 101 IEAKQRGHN 109


>sp|DPHB_SACI1|DIPHTHINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 VDAKQLGHN 10
++AKQ GHN
Sbjct: 101 IEAKQRGHN 109


>sp|Y1761_METMA|MEMO1 family protein MM_1761|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VDAKQLGH 9
VDA +LGH
Sbjct: 111 VDADELGH 118


>sp|AMPPA_METMA|AMP phosphorylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VDAKQLGHN 10
VDAK+LG N
Sbjct: 23 VDAKELGVN 31


>sp|AMPPA_METBU|AMP phosphorylase|Methanococcoides burtonii (strain DSM 6242

Query: 1 SVDAKQLG 8
++DAK+LG
Sbjct: 21 TIDAKELG 28


>sp|SPSS2_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanococcoides burtonii (strain DSM 6242

Query: 2 VDAKQLG 8
VDAK+LG
Sbjct: 206 VDAKELG 212


>sp|RSMA_METVS|PROBABLE ribosomal RNA small subunit|Methanococcus vannielii (strain ATCC

Query: 2 VDAKQLGHN 10
VD K+LG N
Sbjct: 87 VDLKELGFN 95


>sp|RS6E_THESM|SMALL ribosomal subunit protein eS6|Thermococcus sibiricus (strain DSM

Query: 2 VDAKQLGHN 10
++AK+LG N
Sbjct: 38 IEAKELGFN 46


>sp|SUI1_PYRAE|PROTEIN translation factor SUI1 homolog|Pyrobaculum aerophilum (strain

Query: 1 SVDAKQLG 8
S DAKQLG
Sbjct: 57 SEDAKQLG 64


>sp|RPO1C_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma volcanium (strain ATCC

Query: 3 DAKQLGHN 10
+AK+LG+N
Sbjct: 133 EAKKLGYN 140


>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 3 DAKQLGHN 10
DAK+LG N
Sbjct: 23 DAKELGVN 30


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DAKQLGHN 10
DAK+LG N
Sbjct: 23 DAKELGVN 30




100|SequenceR|505|496|MRLFASVDAK

>sp|THPR_ARCFU|RNA 2',3'-cyclic phosphodiesterase|Archaeoglobus fulgidus (strain

Query: 1 MRLFASVD 8
MRLF +VD
Sbjct: 1 MRLFVAVD 8




101|SequenceR|510|501|KQFLNMRLFA

>sp|GGGPS_METTM|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter marburgensis (strain ATCC

Query: 2 QFLNMRLF 9
+FL MRLF
Sbjct: 161 EFLGMRLF 168


>sp|GGGPS_METTH|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 2 QFLNMRLF 9
+FL MRLF
Sbjct: 161 EFLGMRLF 168


>sp|CAS1_PYRHO|CRISPR-ASSOCIATED endonuclease Cas1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 FLNMRLFA 10
FLN RL+A
Sbjct: 188 FLNSRLYA 195


>sp|CAS1_THEKO|CRISPR-ASSOCIATED endonuclease Cas1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 FLNMRLFA 10
FLN RL+A
Sbjct: 192 FLNSRLYA 199




102|SequenceR|515|506|ECDVEKQFLN

>sp|ILVD_METS3|DIHYDROXY-ACID dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 ECDVEKQFLN 10
E D+E +F+N
Sbjct: 497 EIDIENRFIN 506


>sp|AATA1_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 CDVEKQF 8
CD+ KQF
Sbjct: 510 CDMTKQF 516


>sp|AATA_METB6|A-TYPE ATP synthase subunit A|Methanoregula boonei (strain DSM 21154

Query: 2 CDVEKQF 8
CD++KQ+
Sbjct: 516 CDMQKQY 522


>sp|PYRG_METMP|CTP synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 CDVEKQ 7
CDVEK+
Sbjct: 226 CDVEKE 231


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 3 DVEKQFL 9
DV+KQF+
Sbjct: 519 DVDKQFI 525


>sp|GCH3_METS3|GTP cyclohydrolase III|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 DVEKQFLN 10
D+E+QF N
Sbjct: 37 DLERQFAN 44


>sp|RPO5_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo5|Thermoplasma acidophilum (strain ATCC

Query: 1 ECDVEKQFL 9
E ++EK+FL
Sbjct: 29 ELNIEKEFL 37




103|SequenceR|520|511|FSYFKECDVE

>sp|3MGH_AERPE|PUTATIVE 3-methyladenine DNA glycosylase|Aeropyrum pernix (strain ATCC

Query: 2 SYFKECD 8
+YF ECD
Sbjct: 44 AYFGECD 50


>sp|MFNA_METMJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoculleus marisnigri

Query: 1 FSYFKECDV 9
FS+ K CD+
Sbjct: 119 FSFTKACDI 127


>sp|MFNA_METPE|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosphaerula palustris

Query: 1 FSYFKECDV 9
FS+ K CD+
Sbjct: 119 FSFKKACDI 127


>sp|MFNA_METLZ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanocorpusculum labreanum

Query: 1 FSYFKECDV 9
FS+ K CD+
Sbjct: 120 FSFDKTCDI 128


>sp|NEP1_METTP|RIBOSOMAL RNA small subunit methyltransferase|Methanothrix thermoacetophila

Query: 3 YFKECD 8
Y KECD
Sbjct: 164 YVKECD 169


>sp|RS9_PICTO|SMALL ribosomal subunit protein uS9|Picrophilus torridus (strain ATCC

Query: 3 YFKECDVE 10
YFK+ D+E
Sbjct: 89 YFKDSDLE 96


>sp|GATB_HALSA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Halobacterium salinarum (strain ATCC

Query: 1 FSYFKECDV 9
+ YF+E D+
Sbjct: 291 YRYFREADI 299


>sp|MFNA_METB6|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoregula boonei (strain

Query: 1 FSYFKECDV 9
FS+ K CD+
Sbjct: 119 FSFKKACDL 127


>sp|GSA_METMJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 KECDVE 10
KECD E
Sbjct: 362 KECDTE 367


>sp|GATB_NATPD|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Natronomonas pharaonis (strain ATCC

Query: 1 FSYFKECDV 9
+ YF+E D+
Sbjct: 293 YRYFREADI 301


>sp|NADK_PYRFU|NAD kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FSYFKECDV 9
F YF E DV
Sbjct: 42 FPYFNERDV 50


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 2 SYFKECDVE 10
SY KE D++
Sbjct: 242 SYLKELDID 250


>sp|Y1286_METM6|MEMO1 family protein MmarC6_1286|Methanococcus maripaludis (strain C6 /

Query: 4 FKECDV 9
+KECDV
Sbjct: 119 WKECDV 124


>sp|Y632_METM7|MEMO1 family protein MmarC7_0632|Methanococcus maripaludis (strain C7 /

Query: 4 FKECDV 9
+KECDV
Sbjct: 119 WKECDV 124


>sp|Y191_METM5|MEMO1 family protein MmarC5_0191|Methanococcus maripaludis (strain C5 /

Query: 4 FKECDV 9
+KECDV
Sbjct: 119 WKECDV 124




104|SequenceR|525|516|FTMHIFSYFK

>sp|UPPP_KORCO|UNDECAPRENYL-DIPHOSPHATASE cryptofilum (strain OPF8)

Query: 3 MHIFSYF 9
+H+FSY+
Sbjct: 244 LHLFSYY 250


>sp|LEU1_SACS2|2-ISOPROPYLMALATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 TMHIFSYF 9
TMH F Y+
Sbjct: 181 TMHPFKYY 188


>sp|MPNS_NITMS|METHYLPHOSPHONATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 MHIFSYF 9
MH F+YF
Sbjct: 150 MHQFTYF 156




105|SequenceR|530|521|AFFEQFTMHI

>sp|GCSPA_METS5|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Metallosphaera

Query: 2 FFEQFT 7
FFE+FT
Sbjct: 388 FFEEFT 393


>sp|SYP_PICTO|PROLINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 FFEQFTMHI 10
FFE T H+
Sbjct: 154 FFEAHTAHV 162




106|SequenceR|535|526|LYYMAAFFEQ

>sp|XERA_PYRHO|TYROSINE recombinase XerA|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YYMAAFFEQ 10
YY++ FFE+
Sbjct: 35 YYLSKFFEE 43


>sp|XERA_PYRAB|TYROSINE recombinase XerA|Pyrococcus abyssi (strain GE5 /

Query: 2 YYMAAFFEQ 10
YY++ FFE+
Sbjct: 35 YYISKFFEE 43


>sp|IF2B_PYRAR|TRANSLATION initiation factor 2 subunit|Pyrobaculum arsenaticum (strain DSM

Query: 1 LYYMAAFFEQ 10
+Y+MA FF++
Sbjct: 54 IYFMAKFFQK 63


>sp|IF2B_PYRNV|TRANSLATION initiation factor 2 subunit|Pyrobaculum neutrophilum (strain DSM

Query: 1 LYYMAAFFEQ 10
+Y+MA FF++
Sbjct: 54 IYFMAKFFQR 63


>sp|IF2B_PYRAE|TRANSLATION initiation factor 2 subunit|Pyrobaculum aerophilum (strain ATCC

Query: 1 LYYMAAFFEQ 10
+Y+MA FF++
Sbjct: 54 VYFMAKFFQK 63


>sp|PRIS_STAMF|DNA primase small subunit PriS|Staphylothermus marinus (strain ATCC

Query: 1 LYYMAAFFE 9
LYY +A++E
Sbjct: 71 LYYSSAYYE 79


>sp|IF2B_PYRIL|TRANSLATION initiation factor 2 subunit|Pyrobaculum islandicum (strain DSM

Query: 1 LYYMAAFFEQ 10
+Y+MA FF++
Sbjct: 54 VYFMAKFFQK 63


>sp|ABLB_METMP|BETA-LYSINE N(6)-acetyltransferase|Methanococcus maripaludis (strain DSM

Query: 2 YYMAAFFEQ 10
Y+M+ FFE+
Sbjct: 82 YFMSKFFEE 90


>sp|PRIS_METB6|DNA primase small subunit PriS|Methanoregula boonei (strain DSM 21154

Query: 1 LYYMAAFFEQ 10
+YY +A++E+
Sbjct: 71 VYYSSAYYEK 80


>sp|IF2B_PYRCJ|TRANSLATION initiation factor 2 subunit|Pyrobaculum calidifontis (strain DSM

Query: 1 LYYMAAFFEQ 10
+Y MA FF++
Sbjct: 54 VYLMAKFFQK 63




107|SequenceR|540|531|KEEELLYYMA

>sp|Y1385_PYRHO|IRON-SULFUR cluster assembly SufBD family|Pyrococcus horikoshii (strain ATCC

Query: 1 KEEELLYYMA 10
KEEEL Y M+
Sbjct: 393 KEEELFYLMS 402


>sp|PRIS_THEON|DNA primase small subunit PriS|Thermococcus onnurineus (strain NA1)

Query: 1 KEEELLYYMA 10
KEE +LYY A
Sbjct: 10 KEERVLYYKA 19


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 EELLYYMA 10
+ELLYYM+
Sbjct: 457 QELLYYMS 464


>sp|PRIS_AERPE|DNA primase small subunit PriS|Aeropyrum pernix (strain ATCC 700893

Query: 3 EELLYYMA 10
EELL YMA
Sbjct: 55 EELLSYMA 62


>sp|CARA_METVS|CARBAMOYL phosphate synthase small chain|Methanococcus vannielii (strain ATCC

Query: 1 KEEELLYY 8
KEEE+L Y
Sbjct: 203 KEEEILSY 210


>sp|Y865_METJA|PUTATIVE methylthiotransferase MJ0865|Methanocaldococcus jannaschii (strain

Query: 1 KEEELLYYM 9
KEE LLY M
Sbjct: 371 KEENLLYKM 379


>sp|Y943_METJA|UNCHARACTERIZED protein MJ0943|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EEELLYYM 9
EE++LYY+
Sbjct: 144 EEQMLYYI 151


>sp|VHUG_METJA|F420-NON-REDUCING hydrogenase vhu subunit G|Methanocaldococcus jannaschii (strain

Query: 1 KEEELLYYM 9
K+EELL Y+
Sbjct: 103 KKEELLNYV 111


>sp|Y1317_ARCFU|UNCHARACTERIZED protein AF_1317|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EELLYYMA 10
EEL+YY A
Sbjct: 147 EELIYYWA 154




108|SequenceR|545|536|NTRGEKEEEL

>sp|HCGB_METJA|PYRIDINOL guanylyltransferase HcgB|Methanocaldococcus jannaschii (strain

Query: 3 RGEKEEEL 10
RG+KEEEL
Sbjct: 21 RGDKEEEL 28


>sp|GLYA_METAC|SERINE hydroxymethyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 2 TRGEKEEEL 10
TRG KE+E+
Sbjct: 366 TRGMKEKEM 374


>sp|GLYA_METMA|SERINE hydroxymethyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TRGEKEEEL 10
TRG KE+E+
Sbjct: 366 TRGMKEKEM 374


>sp|Y570_METJA|UNCHARACTERIZED protein MJ0570|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TRGEKEEEL 10
T+GEKE+E+
Sbjct: 67 TKGEKEKEV 75


>sp|RRP41_METMA|EXOSOME complex component Rrp41|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TRGEKEE 8
TRGEK+E
Sbjct: 487 TRGEKDE 493




109|SequenceR|550|541|RSGPVNTRGE

>sp|HIS7_METJA|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RSGPVNTRGE 10
R G ++T+GE
Sbjct: 185 RKGVISTKGE 194


>sp|NADB_SACS2|L-ASPARTATE oxidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 VNTRGE 10
VNTRGE
Sbjct: 316 VNTRGE 321


>sp|PURO_METST|IMP cyclohydrolase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 GPVNTRGE 10
G +NT+GE
Sbjct: 115 GAINTKGE 122


>sp|HMDH_METTH|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 SGPVNTRGE 10
+GP+ RGE
Sbjct: 74 AGPLRVRGE 82




110|SequenceR|555|546|SPLKLRSGPV

>sp|SYP_METS3|PROLINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 SPLKLRSGP 9
+P+KL GP
Sbjct: 335 TPIKLELGP 343


>sp|Y3226_SACS2|UNCHARACTERIZED aldolase SSO3226|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SPLKLRSGP 9
SP+ +R GP
Sbjct: 204 SPILIRGGP 212




111|SequenceR|560|551|VTVDRSPLKL

>sp|CCA_PICTO|CCA-ADDING enzyme|Picrophilus torridus (strain ATCC 700027

Query: 2 TVDRSPL 8
TVDR+PL
Sbjct: 128 TVDRTPL 134


>sp|TOP6B_THESM|TYPE 2 DNA topoisomerase 6|Thermococcus sibiricus (strain DSM 12597

Query: 3 VDRSPLKL 10
VDR+PL L
Sbjct: 452 VDRAPLAL 459


>sp|Y130_PYRAB|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus abyssi (strain GE5 /

Query: 4 DRSPLKL 10
DRSPL+L
Sbjct: 129 DRSPLEL 135


>sp|AROC_AERPE|CHORISMATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 VDRSPLK 9
+DR PLK
Sbjct: 179 IDRDPLK 185




112|SequenceR|565|556|YNELLVTVDR

>sp|ATGT_METHJ|TRNA-GUANINE(15) transglycosylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 YNELLVTVDR 10
YNE L +DR
Sbjct: 348 YNEELTALDR 357


>sp|CSG2_HALHT|CELL surface glycoprotein 2|Haloarcula hispanica (strain ATCC 33960

Query: 1 YNELLVTVDR 10
YN+L +T+D
Sbjct: 795 YNDLTITLDE 804


>sp|Y1357_HALVD|PUTATIVE transcriptional regulator HVO_1357|Haloferax volcanii (strain ATCC

Query: 2 NELLVTVDR 10
NELL VDR
Sbjct: 197 NELLRDVDR 205


>sp|RNH2_SULAC|RIBONUCLEASE HII|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 YNELLVTVDR 10
YN +VTVD+
Sbjct: 96 YNPSIVTVDK 105


>sp|ARSA_HALSA|PUTATIVE arsenical pump-driving ATPase|Halobacterium salinarum (strain

Query: 1 YNELLVTVD 9
Y+ LLVT D
Sbjct: 48 YDTLLVTTD 56




113|SequenceR|570|561|KEFKGYNELL

>sp|Y1015_HALLT|UPF0145 protein Hlac_1015|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 EFKGYNELL 10
E KGY EL+
Sbjct: 46 ELKGYTELM 54


>sp|AROE_METS3|SHIKIMATE dehydrogenase (NADP(+))|Methanobrevibacter smithii (strain ATCC

Query: 1 KEFKGYN 7
KE KGYN
Sbjct: 96 KEMKGYN 102


>sp|TDXH1_THEAC|PEROXIREDOXIN 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KEFKGY 6
KEFKGY
Sbjct: 201 KEFKGY 206


>sp|GLYA_METHJ|SERINE hydroxymethyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 1 KEFKGYNE 8
KEFK Y+E
Sbjct: 276 KEFKKYSE 283


>sp|DNLJ_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 FKGYNELL 10
FK YNE L
Sbjct: 214 FKAYNEAL 221


>sp|Y4416_HALS3|UPF0145 protein OE_4416R|Halobacterium salinarum (strain ATCC 29341

Query: 2 EFKGYNELL 10
E K Y+ELL
Sbjct: 46 ELKAYSELL 54


>sp|Y2600_NATPD|UPF0145 protein NP_2600A|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EFKGYNELL 10
E K Y+ELL
Sbjct: 46 ELKAYSELL 54


>sp|Y2432_HALSA|UPF0145 protein VNG_2432C|Halobacterium salinarum (strain ATCC 700922

Query: 2 EFKGYNELL 10
E K Y+ELL
Sbjct: 46 ELKAYSELL 54


>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 2 EFKGYNELL 10
+F GY+E+L
Sbjct: 249 KFAGYDEVL 257


>sp|TDXH2_SULME|PEROXIREDOXIN 2|Sulfuracidifex metallicus (Sulfolobus metallicus)

Query: 3 FKGYNEL 9
FK YNEL
Sbjct: 202 FKDYNEL 208


>sp|CAS8A_METJA|CRISPR-ASSOCIATED protein Cas8a2/Csa4|Methanocaldococcus jannaschii (strain ATCC

Query: 2 EFKGYNELL 10
E GYNE+L
Sbjct: 28 ETPGYNEIL 36


>sp|SYY_SULTO|TYROSINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EFKGYNEL 9
EFK Y EL
Sbjct: 305 EFKSYEEL 312


>sp|Y1205_METJA|UPF0058 protein MJ1205|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EFKGYNEL 9
EFK Y+EL
Sbjct: 30 EFKEYDEL 37


>sp|SYY_SACI1|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 EFKGYNEL 9
EFK Y EL
Sbjct: 302 EFKDYEEL 309


>sp|AROK_ARCFU|SHIKIMATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EFKGYNELL 10
EF+GY+ +L
Sbjct: 151 EFEGYSAVL 159


>sp|SYY_SACI7|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 EFKGYNEL 9
EFK Y EL
Sbjct: 302 EFKDYEEL 309


>sp|SYY_SACI6|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 EFKGYNEL 9
EFK Y EL
Sbjct: 302 EFKDYEEL 309


>sp|SYY_SACI4|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 EFKGYNEL 9
EFK Y EL
Sbjct: 302 EFKDYEEL 309


>sp|SYY_SACI3|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 EFKGYNEL 9
EFK Y EL
Sbjct: 302 EFKDYEEL 309


>sp|SYY_SACI2|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 EFKGYNEL 9
EFK Y EL
Sbjct: 302 EFKDYEEL 309




114|SequenceR|575|566|FILYGKEFKG

>sp|TRUA_METBU|TRNA pseudouridine synthase A|Methanococcoides burtonii (strain DSM 6242

Query: 1 FILYGKEF 8
+ILYG++F
Sbjct: 113 YILYGEQF 120


>sp|Y1334_METJA|PUTATIVE UTP--glucose-1-phosphate uridylyltransferase|Methanocaldococcus

Query: 2 ILYGKEFKG 10
ILYG+EF G
Sbjct: 112 ILYGEEFVG 120


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LYGKEFKG 10
+YG EFKG
Sbjct: 606 IYGDEFKG 613


>sp|DPCKG_METST|GTP-DEPENDENT dephospho-CoA kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 FILYGKEFKG 10
FILYG+ +G
Sbjct: 137 FILYGQPKEG 146


>sp|SYP_PYRCJ|PROLINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 ILYGKEFKG 10
I YG+E KG
Sbjct: 300 IFYGEEEKG 308


>sp|RNJ_METJA|RIBONUCLEASE J|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ILYGKEFK 9
I+YG +FK
Sbjct: 168 IVYGNDFK 175


>sp|DGGGP_METAC|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FILYGKEFKG 10
ILY K KG
Sbjct: 131 LILYAKTLKG 140


>sp|MCRA_METFE|METHYL-COENZYME M reductase subunit alpha|Methanothermus fervidus

Query: 1 FILYGKEF 8
F YGKE+
Sbjct: 349 FTYYGKEY 356


>sp|DGGGP_METMA|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FILYGKEFKG 10
ILY K KG
Sbjct: 131 LILYAKTLKG 140


>sp|OTC_METM5|ORNITHINE carbamoyltransferase|Methanococcus maripaludis (strain C5 /

Query: 5 GKEFKG 10
GK+FKG
Sbjct: 140 GKDFKG 145


>sp|HDRB2_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit B2|Methanococcus

Query: 5 GKEFKG 10
GKE+KG
Sbjct: 110 GKEYKG 115


>sp|MTMB_METMA|MONOMETHYLAMINE methyltransferase MtmB|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 YGKEFKG 10
YG +FKG
Sbjct: 43 YGLDFKG 49


>sp|MTMB3_METBF|MONOMETHYLAMINE methyltransferase MtmB3|Methanosarcina barkeri (strain Fusaro /

Query: 4 YGKEFKG 10
YG +FKG
Sbjct: 43 YGLDFKG 49


>sp|MTMB2_METBF|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri (strain Fusaro /

Query: 4 YGKEFKG 10
YG +FKG
Sbjct: 43 YGLDFKG 49


>sp|MTMB2_METBA|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri

Query: 4 YGKEFKG 10
YG +FKG
Sbjct: 43 YGLDFKG 49


>sp|MTMB2_METAC|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina acetivorans (strain ATCC

Query: 4 YGKEFKG 10
YG +FKG
Sbjct: 43 YGLDFKG 49


>sp|MTMB1_METBF|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri (strain Fusaro /

Query: 4 YGKEFKG 10
YG +FKG
Sbjct: 43 YGLDFKG 49


>sp|MTMB1_METBA|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri

Query: 4 YGKEFKG 10
YG +FKG
Sbjct: 43 YGLDFKG 49


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 4 YGKEFKG 10
YG +FKG
Sbjct: 43 YGLDFKG 49


>sp|Y1157_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FILYGKEFKG 10
I +GKEF+G
Sbjct: 224 IIQFGKEFEG 233


>sp|Y672_METJA|UNCHARACTERIZED transporter MJ0672|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YGKEFK 9
YGK+FK
Sbjct: 107 YGKDFK 112


>sp|KAD6_THEKO|PUTATIVE adenylate kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 YGKEFKG 10
+G++FKG
Sbjct: 59 FGRDFKG 65




115|SequenceR|580|571|LFRVVFILYG

>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 3 RVVFILYG 10
R VF+L+G
Sbjct: 324 RAVFVLWG 331




116|SequenceR|585|576|NVLGFLFRVV

>sp|SYE_METLZ|GLUTAMATE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 VLGFLFRVV 10
VLG+L R+V
Sbjct: 527 VLGYLGRIV 535


>sp|KDPC_THEVO|POTASSIUM-TRANSPORTING ATPase KdpC subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VLGFLFRVV 10
VLGFLF V
Sbjct: 18 VLGFLFPTV 26


>sp|COXX_HYPBU|PROTOHEME IX farnesyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 VLGFLFRVV 10
V+GFLF +V
Sbjct: 121 VIGFLFDIV 129




117|SequenceR|590|581|STREQNVLGF

>sp|PYRG_HALWD|CTP synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 5 QNVLGF 10
QNVLGF
Sbjct: 403 QNVLGF 408


>sp|HIS8_METAR|HISTIDINOL-PHOSPHATE aminotransferase|Methanocella arvoryzae (strain DSM 22066

Query: 2 TREQNV 7
TREQNV
Sbjct: 343 TREQNV 348


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 3 REQNVLGF 10
R +NV+GF
Sbjct: 413 RHENVVGF 420


>sp|Y1422_METBF|MEMO1 family protein Mbar_A1422|Methanosarcina barkeri (strain Fusaro /

Query: 3 REQNVLG 9
RE+N+LG
Sbjct: 32 RERNILG 38


>sp|GLPK_THEON|GLYCEROL kinase|Thermococcus onnurineus (strain NA1)

Query: 3 REQNVLG 9
RE NVLG
Sbjct: 22 RESNVLG 28


>sp|RPO11_THEON|DNA-DIRECTED RNA polymerase subunit Rpo11|Thermococcus onnurineus (strain NA1)

Query: 3 REQNVLGF 10
RE+NVL F
Sbjct: 8 REENVLEF 15




118|SequenceR|595|586|KKELYSTREQ

***** No hits found ******


119|SequenceR|600|591|IKCSLKKELY

>sp|MOAA_META3|PROBABLE GTP 3',8-cyclase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 IKCSLKKELY 10
IKC ++ELY
Sbjct: 287 IKCIDRRELY 296




120|SequenceR|605|596|RIQQSIKCSL

>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 RIQQSIKCS 9
RI+ S+KCS
Sbjct: 984 RIEVSVKCS 992


>sp|Y940_METJA|TPR repeat-containing protein MJ0940|Methanocaldococcus jannaschii

Query: 1 RIQQSIKC 8
RI++SI+C
Sbjct: 304 RIEESIEC 311


>sp|Y1497_METJA|UNCHARACTERIZED metallohydrolase MJ1497|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RIQQSIKC 8
+IQ+ IKC
Sbjct: 134 KIQRGIKC 141




121|SequenceR|610|601|KLLELRIQQS

>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KLLELRIQQ 9
KLL L +QQ
Sbjct: 1032 KLLNLNVQQ 1040




122|SequenceR|615|606|KVEIWKLLEL

>sp|FBPAP_THEKO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KVEIWKLLE 9
+ E+W +LE
Sbjct: 170 RFEVWDILE 178


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 4 IWKLLEL 10
+WKLLE+
Sbjct: 706 LWKLLEI 712


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 2 VEIWKLL 8
VE+WKL+
Sbjct: 80 VEVWKLI 86


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 2 VEIWKLL 8
VE+WKL+
Sbjct: 80 VEVWKLI 86


>sp|CAS5_ARCFU|CRISPR-ASSOCIATED protein Cas5|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 WKLLEL 10
WKLLE+
Sbjct: 221 WKLLEI 226


>sp|OTCA_PYRFU|ORNITHINE carbamoyltransferase, anabolic|Pyrococcus furiosus (strain ATCC

Query: 3 EIWKLLE 9
EIW +LE
Sbjct: 20 EIWTILE 26


>sp|SYY_PYRCJ|TYROSINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 VEIWKLLEL 10
VE+WK EL
Sbjct: 313 VEVWKYEEL 321


>sp|OTC_PYRHO|ORNITHINE carbamoyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 EIWKLLE 9
EIW +LE
Sbjct: 20 EIWTILE 26




123|SequenceR|620|611|KKAKAKVEIW

>sp|RFCL_METST|REPLICATION factor C large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 2 KAKAKVEIW 10
KAKA++E+W
Sbjct: 20 KAKAQIEVW 28


>sp|CDC6_METHJ|ORC1-TYPE DNA replication protein|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KKAKAKVE 8
KKA+AK+E
Sbjct: 295 KKAQAKIE 302


>sp|HTPX1_SULTO|PROTEASE HtpX homolog 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KAKAKVEIW 10
KA AK+EI+
Sbjct: 236 KALAKIEIY 244




124|SequenceR|625|616|PQIQLKKAKA

>sp|RNZ_META3|RIBONUCLEASE Z|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PQIQLKKA 8
PQ+ LKKA
Sbjct: 155 PQLNLKKA 162




125|SequenceR|630|621|LELQSPQIQL

***** No hits found ******


126|SequenceR|635|626|YLCYFLELQS

>sp|RIFK_METBU|RIBOFLAVIN kinase|Methanococcoides burtonii (strain DSM 6242

Query: 3 CYFLELQ 9
CYF+E++
Sbjct: 167 CYFVEVE 173


>sp|PRIS_PYRNV|DNA primase small subunit PriS|Pyrobaculum neutrophilum (strain DSM

Query: 1 YLCYFLELQ 9
YL +LELQ
Sbjct: 297 YLAIYLELQ 305


>sp|PRIS_PYRIL|DNA primase small subunit PriS|Pyrobaculum islandicum (strain DSM 4184

Query: 1 YLCYFLELQ 9
YL +LELQ
Sbjct: 297 YLAIYLELQ 305


>sp|COOS2_METAC|CARBON monoxide dehydrogenase 2|Methanosarcina acetivorans (strain ATCC

Query: 1 YLCYFLE 7
YLC F+E
Sbjct: 146 YLCEFVE 152




127|SequenceR|640|631|EEQMEYLCYF

>sp|MTRB_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanococcus vannielii (strain

Query: 1 EEQMEYLCYF 10
EEQ+ L YF
Sbjct: 37 EEQINKLAYF 46


>sp|TF2B_SULTO|TRANSCRIPTION initiation factor IIB|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EEQMEYLC 8
EE+ EY+C
Sbjct: 23 EERGEYIC 30


>sp|TF2B_SULAC|TRANSCRIPTION initiation factor IIB|Sulfolobus acidocaldarius (strain ATCC

Query: 1 EEQMEYLC 8
EE+ EY+C
Sbjct: 22 EERGEYIC 29


>sp|TF2B_PYROC|TRANSCRIPTION initiation factor IIB|Pyrodictium occultum

Query: 1 EEQMEYLC 8
EE+ EY+C
Sbjct: 26 EERGEYIC 33


>sp|ENO_HALMA|ENOLASE marismortui (strain ATCC 43049

Query: 1 EEQMEYL 7
EEQ+EY+
Sbjct: 256 EEQIEYI 262


>sp|SAHH_SACS2|ADENOSYLHOMOCYSTEINASE solfataricus (strain ATCC 35092

Query: 1 EEQMEYL 7
EEQ EYL
Sbjct: 404 EEQKEYL 410


>sp|TF2B_METKA|TRANSCRIPTION initiation factor IIB|Methanopyrus kandleri (strain AV19 /

Query: 1 EEQMEYLC 8
EE+ EY+C
Sbjct: 27 EERGEYVC 34


>sp|RIFK_METLZ|RIBOFLAVIN kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 EEQMEYLCYF 10
+EQ E LC F
Sbjct: 118 QEQFEKLCGF 127


>sp|GATE_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 1 EEQMEYLCY 9
E + EYL Y
Sbjct: 70 EREFEYLAY 78


>sp|GATE_HALS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 1 EEQMEYLCY 9
E + EYL Y
Sbjct: 70 EREFEYLAY 78




128|SequenceR|645|636|RQVFDEEQME

>sp|MCRG_METFE|METHYL-COENZYME M reductase subunit gamma|Methanothermus fervidus

Query: 1 RQVFDEE 7
RQV+DEE
Sbjct: 174 RQVYDEE 180


>sp|RIBL_METMS|FAD synthase|Methanohalophilus mahii (strain ATCC 35705

Query: 2 QVFDEEQME 10
QVFDE+++E
Sbjct: 93 QVFDEKELE 101


>sp|MCRZ_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 RQVFDEEQ 8
R VFDEE+
Sbjct: 177 RYVFDEEK 184


>sp|MCRZ_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 RQVFDEEQ 8
R VFDEE+
Sbjct: 177 RYVFDEEK 184




129|SequenceR|650|641|FYDMARQVFD

>sp|COBS_SULAC|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FYDMARQVFD 10
FY MA+ VFD
Sbjct: 204 FYLMAKLVFD 213


>sp|SYE_METBU|GLUTAMATE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 FYDMARQVFD 10
+YD ARQ+ +
Sbjct: 184 YYDYARQLLE 193


>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 FYDMARQVFD 10
+YD ARQ+ +
Sbjct: 175 YYDYARQLIE 184


>sp|PURO_HALMA|IMP cyclohydrolase|Haloarcula marismortui (strain ATCC 43049

Query: 3 DMARQVFD 10
D+AR+V+D
Sbjct: 168 DVAREVYD 175


>sp|RFCL_HALLT|REPLICATION factor C large subunit|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 FYDMAR 6
+YDMAR
Sbjct: 150 YYDMAR 155


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 FYDMARQVFD 10
FY +AR++ +
Sbjct: 683 FYTLAREIIE 692




130|SequenceR|655|646|IEIKPFYDMA

>sp|Y796_METKA|UPF0288 protein MK0796|Methanopyrus kandleri (strain AV19 /

Query: 1 IEIKPFYDM 9
IE +PFYD+
Sbjct: 240 IEPRPFYDL 248


>sp|SYDND_METMA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EIKPFYDM 9
EIKPFY M
Sbjct: 340 EIKPFYAM 347


>sp|SYDND_METAC|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EIKPFYDM 9
EIKPFY M
Sbjct: 340 EIKPFYAM 347


>sp|SYDND_NATPD|ASPARTATE--TRNA(ASP/ASN) ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EIKPFYDM 9
EIKPFY M
Sbjct: 330 EIKPFYIM 337


>sp|SYDND_METBU|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 EIKPFYDM 9
EIKPFY M
Sbjct: 339 EIKPFYAM 346


>sp|SYDND_METBF|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 EIKPFYDM 9
EIKPFY M
Sbjct: 340 EIKPFYAM 347


>sp|SYDND_METJA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EIKPFYDM 9
EI+PFY M
Sbjct: 334 EIRPFYTM 341


>sp|SYDND_HALVO|ASPARTATE--TRNA(ASP/ASN) ligase|Haloferax volcanii (Halobacterium volcanii)

Query: 2 EIKPFY 7
EIKPFY
Sbjct: 329 EIKPFY 334


>sp|SYDND_HALWD|ASPARTATE--TRNA(ASP/ASN) ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 EIKPFY 7
EIKPFY
Sbjct: 330 EIKPFY 335


>sp|SYDND_METKA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 EIKPFYDMA 10
E +PFY MA
Sbjct: 329 ETRPFYTMA 337


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 IKPFYDM 9
IKP+YD+
Sbjct: 655 IKPYYDL 661


>sp|SPEB_METJA|AGMATINASE jannaschii (strain ATCC 43067

Query: 1 IEIKPFYDMA 10
+E+ P YD+A
Sbjct: 256 VEVSPIYDIA 265


>sp|SYDND_HALMA|ASPARTATE--TRNA(ASP/ASN) ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 EIKPFY 7
EIKPFY
Sbjct: 330 EIKPFY 335


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 3 IKPFYDM 9
IKP+YD+
Sbjct: 655 IKPYYDL 661


>sp|PELO_METJA|PROTEIN pelota homolog|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IEIKPFYDMA 10
IEIKPF +++
Sbjct: 100 IEIKPFDELS 109


>sp|PYCA_METTH|PYRUVATE carboxylase subunit A|Methanothermobacter thermautotrophicus

Query: 2 EIKPFYD 8
EI PFYD
Sbjct: 376 EIPPFYD 382


>sp|Y1797_METTH|PROBABLE S-adenosyl-L-methionine-binding protein

Query: 1 IEIKPFYD 8
I+IKP+Y+
Sbjct: 123 IDIKPYYE 130


>sp|SYDND_META3|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 EIKPFYDM 9
EI+PFY +
Sbjct: 334 EIRPFYTL 341


>sp|MCH_METPE|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 KPFYDM 9
KPFYD+
Sbjct: 261 KPFYDI 266


>sp|MCH_METTM|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanothermobacter marburgensis (strain ATCC

Query: 4 KPFYDM 9
KPFYD+
Sbjct: 267 KPFYDV 272


>sp|MCH_METTH|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 KPFYDM 9
KPFYD+
Sbjct: 267 KPFYDV 272


>sp|MCH_METMJ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 KPFYDM 9
KPFYD+
Sbjct: 261 KPFYDI 266


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KPFYDM 9
KPFYD+
Sbjct: 718 KPFYDI 723


>sp|SYD_PICTO|ASPARTATE--TRNA(ASP) ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 IEIKPFYDM 9
+ ++PFY M
Sbjct: 320 VSLRPFYTM 328


>sp|Y2198_SACI3|UPF0282 protein M1627_2198|Saccharolobus islandicus (strain M.16.27)

Query: 3 IKPFYDMA 10
+KP YD+A
Sbjct: 250 LKPVYDIA 257


>sp|Y2122_SACI6|UPF0282 protein M164_2122|Saccharolobus islandicus (strain M.16.4 /

Query: 3 IKPFYDMA 10
+KP YD+A
Sbjct: 250 LKPVYDIA 257


>sp|Y2116_SACI4|UPF0282 protein M1425_2116|Saccharolobus islandicus (strain M.14.25 /

Query: 3 IKPFYDMA 10
+KP YD+A
Sbjct: 250 LKPVYDIA 257


>sp|Y230_METJA|UNCHARACTERIZED protein MJ0230|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IEIKPFYDM 9
+ I PFYD+
Sbjct: 21 VAINPFYDI 29


>sp|SYN_THEVO|ASPARAGINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 EIKPFY 7
E+KPFY
Sbjct: 323 ELKPFY 328


>sp|Y572_METJA|UNCHARACTERIZED protein MJ0572|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IEIKPFY 7
IE+ PFY
Sbjct: 35 IELNPFY 41


>sp|KU_ARCFU|NON-HOMOLOGOUS end joining protein Ku|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IEIKPFYDMA 10
IEI+ F+D A
Sbjct: 90 IEIRQFFDPA 99


>sp|SYDND_AERPE|ASPARTATE--TRNA(ASP/ASN) ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 EIKPFYDM 9
+++PFY M
Sbjct: 338 KVRPFYTM 345


>sp|Y671_SACI1|UPF0282 protein YN1551_0671|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 IKPFYDMA 10
+KP YD+A
Sbjct: 250 LKPVYDIA 257


>sp|Y2281_SACI2|UPF0282 protein LS215_2281|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 IKPFYDMA 10
+KP YD+A
Sbjct: 250 LKPVYDIA 257


>sp|Y2245_SACI7|UPF0282 protein YG5714_2245|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 IKPFYDMA 10
+KP YD+A
Sbjct: 250 LKPVYDIA 257




131|SequenceR|660|651|RTSLNIEIKP

>sp|Y123_METJA|UNCHARACTERIZED protein MJ0123|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SLNIEIKP 10
S+NIEIKP
Sbjct: 26 SINIEIKP 33


>sp|DAPA_METVS|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 RTSLNIE 7
RT+LNIE
Sbjct: 136 RTALNIE 142


>sp|DAPA_METM7|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 RTSLNIE 7
RT+LNIE
Sbjct: 136 RTALNIE 142


>sp|DAPA_METM6|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 RTSLNIE 7
RT+LNIE
Sbjct: 136 RTALNIE 142


>sp|DAPA_METM5|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 RTSLNIE 7
RT+LNIE
Sbjct: 136 RTALNIE 142


>sp|DAPA_METMP|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 RTSLNIE 7
RT+LNIE
Sbjct: 136 RTALNIE 142


>sp|PNPH_THEKO|PROBABLE 6-oxopurine nucleoside phosphorylase|Thermococcus kodakarensis

Query: 3 SLNIEIKP 10
SLN+++KP
Sbjct: 87 SLNLDMKP 94


>sp|APGM_METST|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosphaera stadtmanae (strain ATCC

Query: 4 LNIEIKP 10
+N+E+KP
Sbjct: 83 INVEVKP 89


>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RTSLNIEIKP 10
+ N+E+KP
Sbjct: 96 KVPFNVEVKP 105


>sp|COXX2_PICTO|PROTOHEME IX farnesyltransferase 2|Picrophilus torridus (strain ATCC 700027

Query: 1 RTSLNIEI 8
RTSLNI I
Sbjct: 132 RTSLNIVI 139




132|SequenceR|665|656|VMHDMRTSLN

>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VMHDMRTSLN 10
+MHDM S N
Sbjct: 293 IMHDMHISPN 302


>sp|RFCS_SACS2|REPLICATION factor C small subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 MHDMRTSLN 10
M DMR S+N
Sbjct: 197 MGDMRKSIN 205


>sp|RS4E_PYRHO|SMALL ribosomal subunit protein eS4|Pyrococcus horikoshii (strain ATCC

Query: 3 HDMRTSL 9
H+MRTS+
Sbjct: 37 HNMRTSI 43


>sp|RS4E_PYRFU|SMALL ribosomal subunit protein eS4|Pyrococcus furiosus (strain ATCC

Query: 3 HDMRTSL 9
H+MRTS+
Sbjct: 37 HNMRTSI 43


>sp|RS4E_PYRAB|SMALL ribosomal subunit protein eS4|Pyrococcus abyssi (strain GE5 /

Query: 3 HDMRTSL 9
H+MRTS+
Sbjct: 37 HNMRTSI 43


>sp|COOS1_METMA|CARBON monoxide dehydrogenase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VMHDMRTSLN 10
++H +RTSL+
Sbjct: 213 LLHGLRTSLS 222


>sp|COOS1_METAC|CARBON monoxide dehydrogenase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 VMHDMRTSLN 10
++H +RTSL+
Sbjct: 213 LLHGLRTSLS 222


>sp|Y1094_HALWD|PUTATIVE heme-binding protein HQ_1094A|Haloquadratum walsbyi (strain DSM

Query: 1 VMHDMRT 7
V+HD RT
Sbjct: 13 VLHDFRT 19




133|SequenceR|670|661|ICFSSVMHDM

>sp|GSA_METVS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus vannielii (strain ATCC 35089

Query: 2 CFSSVMHD 9
CF+S+ HD
Sbjct: 402 CFTSIKHD 409


>sp|GSA_METJA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CFSSVMHD 9
CF+S+ HD
Sbjct: 400 CFTSIKHD 407


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 CFS--SVMHDM 10
CF S+MHDM
Sbjct: 287 CFGMFSIMHDM 297


>sp|RS14Z_METBU|SMALL ribosomal subunit protein uS14|Methanococcoides burtonii (strain

Query: 2 CFSSVMHDM 10
CF + HDM
Sbjct: 36 CFREIAHDM 44


>sp|RS14Z_METBF|SMALL ribosomal subunit protein uS14|Methanosarcina barkeri (strain

Query: 2 CFSSVMHDM 10
CF + HDM
Sbjct: 36 CFREIAHDM 44


>sp|RS14Z_NANEQ|SMALL ribosomal subunit protein uS14|Nanoarchaeum equitans (strain

Query: 2 CFSSVMHDM 10
CF V H++
Sbjct: 54 CFKEVAHEL 62


>sp|RS14Z_METAC|SMALL ribosomal subunit protein uS14|Methanosarcina acetivorans (strain

Query: 2 CFSSVMHDM 10
CF + H+M
Sbjct: 36 CFREIAHEM 44


>sp|RS14Z_METMA|SMALL ribosomal subunit protein uS14|Methanosarcina mazei (strain ATCC

Query: 2 CFSSVMHDM 10
CF + H+M
Sbjct: 36 CFREIAHEM 44




134|SequenceR|675|666|RHCNEICFSS

>sp|RL22_METAR|LARGE ribosomal subunit protein uL22|Methanocella arvoryzae (strain DSM

Query: 1 RHCNEIC 7
+HC EIC
Sbjct: 28 KHCQEIC 34


>sp|RL22_METS3|LARGE ribosomal subunit protein uL22|Methanobrevibacter smithii (strain

Query: 1 RHCNEIC 7
+HC EIC
Sbjct: 29 KHCVEIC 35


>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 CNEICFS 9
C+E+C+S
Sbjct: 268 CSELCYS 274


>sp|Y3507_METJA|UNCHARACTERIZED protein MJECL07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RHCNEIC 7
RH N+IC
Sbjct: 298 RHINKIC 304


>sp|SYFB_HALLT|PHENYLALANINE--TRNA ligase beta subunit|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 RHCNEICFS 9
R CN +C++
Sbjct: 250 RMCNIVCYA 258


>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 3 CNEICFS 9
C ++CFS
Sbjct: 141 CEDLCFS 147


>sp|Y066_METJA|UNCHARACTERIZED protein MJ0066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RHCNEIC 7
R C+EIC
Sbjct: 335 RWCSEIC 341


>sp|Y973_METJA|UNCHARACTERIZED protein MJ0973|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RHCNEIC 7
R CN +C
Sbjct: 257 RWCNSVC 263




135|SequenceR|680|671|SLSEVRHCNE

>sp|Y2317_HALSA|PUTATIVE ABC transporter ATP-binding protein|Halobacterium salinarum

Query: 5 VRHCN 9
VRHCN
Sbjct: 44 VRHCN 48


>sp|COFD_METKA|2-PHOSPHO-L-LACTATE transferase|Methanopyrus kandleri (strain AV19 /

Query: 1 SLSEVRH 7
S+SE+RH
Sbjct: 206 SISEIRH 212


>sp|DTDA_METB6|D-AMINOACYL-TRNA deacylase|Methanoregula boonei (strain DSM 21154

Query: 2 LSEVRHCNE 10
LSE + C+E
Sbjct: 306 LSEAKRCDE 314




136|SequenceR|685|676|HLFGLSLSEV

>sp|HPPA1_METAC|PUTATIVE K(+)-stimulated pyrophosphate-energized sodium pump|Methanosarcina

Query: 2 LFGLSLS 8
LFGLSLS
Sbjct: 139 LFGLSLS 145


>sp|HPPA1_METMA|K(+)-STIMULATED pyrophosphate-energized sodium pump|Methanosarcina mazei (strain

Query: 2 LFGLSLS 8
LFGLSLS
Sbjct: 139 LFGLSLS 145


>sp|Y4097_METAC|UPF0235 protein MA_4097|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LFGLSLSEV 10
LFG+S SE+
Sbjct: 68 LFGISSSEI 76


>sp|Y576_ARCFU|UNCHARACTERIZED protein AF_0576|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HLFGLSLSEV 10
H+FG+S E
Sbjct: 4 HVFGMSAEEA 13




137|SequenceR|690|681|EKPMNHLFGL

>sp|MDH_ARCFU|MALATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KPMNHLFGL 10
KP N +FG+
Sbjct: 134 KPRNEVFGM 142


>sp|RPO10_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrobaculum aerophilum (strain ATCC

Query: 2 KPMNHLFGL 10
KP+ HL+ +
Sbjct: 12 KPLGHLYAV 20


>sp|RPO10_PYRCJ|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrobaculum calidifontis (strain DSM

Query: 2 KPMNHLFGL 10
KP+ HL+ +
Sbjct: 12 KPLGHLYAV 20


>sp|RPO10_PYRAR|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrobaculum arsenaticum (strain DSM

Query: 2 KPMNHLFGL 10
KP+ HL+ +
Sbjct: 12 KPLGHLYAV 20


>sp|Y1590_METJA|UNCHARACTERIZED protein MJ1590|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 MNHLFG 9
+NHLFG
Sbjct: 47 INHLFG 52


>sp|SPSS_METVS|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EKPMNH 6
EKP NH
Sbjct: 304 EKPRNH 309


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 1 EKPMNHLFGL 10
EKP LFG+
Sbjct: 565 EKPYKALFGV 574


>sp|SPSS_METM7|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain C7 /

Query: 1 EKPMNH 6
EKP NH
Sbjct: 304 EKPRNH 309


>sp|SPSS_METM6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain C6 /

Query: 1 EKPMNH 6
EKP NH
Sbjct: 304 EKPRNH 309


>sp|SPSS_METM5|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain C5 /

Query: 1 EKPMNH 6
EKP NH
Sbjct: 304 EKPRNH 309


>sp|SPSS_METMP|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EKPMNH 6
EKP NH
Sbjct: 304 EKPRNH 309


>sp|AMZA_NANEQ|ARCHAEMETZINCIN equitans (strain Kin4-M)

Query: 4 MNHLFGL 10
M H+FGL
Sbjct: 112 MGHVFGL 118




138|SequenceR|695|686|EEEEEEKPMN

>sp|CAS8_THETK|CRISPR system associated protein Cas8|Thermoproteus tenax (strain ATCC

Query: 2 EEEEEKP 8
EEEE++P
Sbjct: 83 EEEEQRP 89




139|SequenceR|700|691|HRGEKEEEEE

***** No hits found ******


140|SequenceR|705|696|QVMDLHRGEK

>sp|LCAO_UNCAR|LONG-CHAIN alcohol oxidase|Uncultured marine euryarchaeote

Query: 1 QVMDLHRGEK 10
Q++D HRG++
Sbjct: 32 QILDRHRGQR 41


>sp|OFOB2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 5 LHRGEK 10
LHRGEK
Sbjct: 132 LHRGEK 137


>sp|GLFT_THEAC|GLUTAMATE formimidoyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 3 MDLHRGE 9
MD HRGE
Sbjct: 74 MDAHRGE 80


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 2 VMDLHRG 8
+MD+HRG
Sbjct: 41 IMDIHRG 47


>sp|Y1996_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 3 MDLHRGEK 10
+++HRGE+
Sbjct: 334 LEIHRGER 341


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 VMDLHRGE 9
+M HRGE
Sbjct: 724 IMKFHRGE 731


>sp|Y1402_METJA|UNCHARACTERIZED protein MJ1402|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VMDLHRGEK 10
V LH+GEK
Sbjct: 287 VGTLHKGEK 295


>sp|RNH2_PYRAR|RIBONUCLEASE HII|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 QVMDLHRGE 9
+V+ LH+GE
Sbjct: 124 RVVSLHKGE 132


>sp|NEP1_PYRNV|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum neutrophilum

Query: 1 QVMDLHRGE 9
+M+LHRG
Sbjct: 127 SLMELHRGS 135


>sp|CBIX_ARCFU|SIROHYDROCHLORIN cobaltochelatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QVMDLHR 7
+VM+LHR
Sbjct: 19 EVMELHR 25




141|SequenceR|710|701|SPLVCQVMDL

>sp|PDXS_HALLT|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Halorubrum lacusprofundi (strain

Query: 1 SPLVCQVMDL 10
SP VC DL
Sbjct: 131 SPFVCGARDL 140


>sp|CS12F_UNCAX|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f1|Uncultured archaeon

Query: 1 SPLVCQV 7
SPLVC +
Sbjct: 331 SPLVCAI 337




142|SequenceR|715|706|AAHSSSPLVC

>sp|GPMI_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 AHSSSPLVC 10
AH+S+P+ C
Sbjct: 469 AHTSNPVKC 477


>sp|GPMI2_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 AHSSSPLVC 10
AH+S+P+ C
Sbjct: 473 AHTSNPVKC 481


>sp|GPMI1_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina barkeri (strain Fusaro /

Query: 2 AHSSSPLVC 10
AH+S+P+ C
Sbjct: 466 AHTSNPVKC 474


>sp|GPMI_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM 6242

Query: 2 AHSSSPLVC 10
AH+S+P+ C
Sbjct: 466 AHTSNPVRC 474


>sp|GPMI2_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina acetivorans (strain ATCC

Query: 2 AHSSSPLVC 10
AH+S+P+ C
Sbjct: 469 AHTSNPVRC 477


>sp|GPMI1_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina acetivorans (strain ATCC

Query: 2 AHSSSPLVC 10
AH+S+P+ C
Sbjct: 463 AHTSNPVRC 471


>sp|TRPA_PYRFU|TRYPTOPHAN synthase alpha chain|Pyrococcus furiosus (strain ATCC 43587

Query: 3 HSSSPLV 9
HSS+P+V
Sbjct: 78 HSSTPIV 84


>sp|AMYA_PYRFU|ALPHA-AMYLASE furiosus (strain ATCC 43587

Query: 1 AAHSSSPLV 9
A H+S PL+
Sbjct: 48 AIHTSGPLI 56




143|SequenceR|720|711|LGHSCAAHSS

>sp|VHUU_METVO|F420-NON-REDUCING hydrogenase vhu subunit U|Methanococcus voltae

Query: 3 HSCAAH 8
+SCAAH
Sbjct: 21 YSCAAH 26


>sp|VHUU_METMP|F420-NON-REDUCING hydrogenase vhu subunit U|Methanococcus maripaludis (strain DSM

Query: 3 HSCAAH 8
+SCAAH
Sbjct: 21 YSCAAH 26


>sp|VHUU_METJA|F420-NON-REDUCING hydrogenase vhu subunit U|Methanocaldococcus jannaschii (strain

Query: 3 HSCAAH 8
+SCAAH
Sbjct: 28 YSCAAH 33


>sp|ILVC_METB6|KETOL-ACID reductoisomerase (NADP(+))|Methanoregula boonei (strain DSM 21154

Query: 3 HSCAAHSS 10
H+C AH +
Sbjct: 156 HTCKAHKT 163




144|SequenceR|725|716|LHSNVLGHSC

>sp|NIKR_HALWD|PUTATIVE nickel-responsive regulator|Haloquadratum walsbyi (strain DSM

Query: 1 LHSNVLGHSC 10
HS+V GH C
Sbjct: 87 FHSHVGGHHC 96


>sp|NIKR_HALSA|PUTATIVE nickel-responsive regulator|Halobacterium salinarum (strain ATCC

Query: 1 LHSNVLGHSC 10
HS+V GH C
Sbjct: 87 FHSHVGGHHC 96


>sp|NIKR_HALS3|PUTATIVE nickel-responsive regulator|Halobacterium salinarum (strain ATCC

Query: 1 LHSNVLGHSC 10
HS+V GH C
Sbjct: 87 FHSHVGGHHC 96


>sp|HCP_METVS|HYDROXYLAMINE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 2 HSNVLGHS 9
H+NVLG++
Sbjct: 158 HANVLGYN 165


>sp|GSA_METHJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 VLGHSC 10
+LGH+C
Sbjct: 61 ILGHAC 66


>sp|Y3535_METJA|UNCHARACTERIZED protein MJECL35|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LHSNVLGHS 9
+HS V GH+
Sbjct: 157 IHSKVTGHN 165


>sp|TRPB2_METMA|TRYPTOPHAN synthase beta chain 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LHSNVLGHSC 10
LH V+G C
Sbjct: 246 LHQTVIGAEC 255


>sp|TRPB2_METAC|TRYPTOPHAN synthase beta chain 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LHSNVLGHSC 10
LH V+G C
Sbjct: 246 LHQTVIGAEC 255


>sp|NPD_AERPE|NAD-DEPENDENT protein deacylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LHSNVLGHSC 10
LH NVL C
Sbjct: 117 LHGNVLRARC 126


>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LHSNVLGHS 9
+H NV+G+S
Sbjct: 821 IHINVVGNS 829




145|SequenceR|730|721|CFSSTLHSNV

>sp|FTHS_HALWD|FORMATE--TETRAHYDROFOLATE ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 CFSSTLHS 8
C S T HS
Sbjct: 509 CLSKTFHS 516




146|SequenceR|735|726|SFLGRCFSST

>sp|PHI_METJA|3-HEXULOSE-6-PHOSPHATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FLGRCFS 8
++GRCF+
Sbjct: 53 YIGRCFA 59


>sp|Y1566_METJA|UNCHARACTERIZED protein MJ1566|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FLGRCFSST 10
+LGRC S+
Sbjct: 100 YLGRCIYSS 108


>sp|FTRL_METTM|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanothermobacter marburgensis

Query: 1 SFLGRCFSST 10
+F GRC +T
Sbjct: 15 AFTGRCVRAT 24


>sp|FTRL_METTH|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanothermobacter

Query: 1 SFLGRCFSST 10
+F GRC +T
Sbjct: 15 AFTGRCVRAT 24




147|SequenceR|740|731|STSLVSFLGR

***** No hits found ******


148|SequenceR|745|736|ETLSQSTSLV

***** No hits found ******


149|SequenceR|750|741|DSLDLETLSQ

>sp|CDC6_THEKO|ORC1-TYPE DNA replication protein|Thermococcus kodakarensis (strain ATCC

Query: 1 DSLDLETLSQ 10
DSLD+E L+Q
Sbjct: 340 DSLDVEPLTQ 349


>sp|NADA_SULTO|QUINOLINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DSLDLETLSQ 10
DSLD++TL +
Sbjct: 87 DSLDVDTLKK 96


>sp|DHE2_SACS2|GLUTAMATE dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DSLDLETLSQ 10
D+ LETLSQ
Sbjct: 28 DNETLETLSQ 37


>sp|Y1565_METJA|PROBABLE helicase MJ1565|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SLDLETLSQ 10
+LD ETLSQ
Sbjct: 404 TLDAETLSQ 412




150|SequenceR|755|746|DGLSNDSLDL

>sp|DNAG_METST|DNA primase DnaG|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DGLSNDSLDL 10
+GL +DSLDL
Sbjct: 37 EGLLSDSLDL 46


>sp|AMPPA_THEKO|AMP phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GLSNDSLDL 10
G+S D LDL
Sbjct: 60 GISRDVLDL 68


>sp|DNAG_THEON|DNA primase DnaG|Thermococcus onnurineus (strain NA1)

Query: 1 DGLSNDSLDL 10
+GL D LDL
Sbjct: 64 EGLLGDDLDL 73


>sp|DNAG_THEKO|DNA primase DnaG|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DGLSNDSLDL 10
+GL D LDL
Sbjct: 62 EGLLGDDLDL 71


>sp|DNAG_THEGJ|DNA primase DnaG|Thermococcus gammatolerans (strain DSM 15229

Query: 1 DGLSNDSLDL 10
+GL D LDL
Sbjct: 63 EGLLGDDLDL 72


>sp|DNAG_PYRHO|DNA primase DnaG|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DGLSNDSLDL 10
+GL D LDL
Sbjct: 64 EGLLGDDLDL 73


>sp|DNAG_PYRFU|DNA primase DnaG|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DGLSNDSLDL 10
+GL D LDL
Sbjct: 64 EGLLGDDLDL 73


>sp|DNAG_PYRAB|DNA primase DnaG|Pyrococcus abyssi (strain GE5 /

Query: 1 DGLSNDSLDL 10
+GL D LDL
Sbjct: 64 EGLLGDDLDL 73


>sp|SUI1_SULAC|PROTEIN translation factor SUI1 homolog|Sulfolobus acidocaldarius (strain

Query: 1 DGLSNDSLDL 10
+G+SND +L
Sbjct: 40 EGISNDETEL 49




151|SequenceR|760|751|VRMGPDGLSN

>sp|Y1979_METAC|UPF0758 protein MA_1979|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VRMGPDGLSN 10
+R GP+ LSN
Sbjct: 22 IRSGPESLSN 31


>sp|Y2303_METBF|UPF0758 protein Mbar_A2303|Methanosarcina barkeri (strain Fusaro /

Query: 1 VRMGPDGLSN 10
+R GP+ LSN
Sbjct: 22 IRNGPESLSN 31


>sp|HMEB_ARCFU|HDR-LIKE menaquinol oxidoreductase integral membrane|Archaeoglobus

Query: 2 RMGPDGLSN 10
+MG +GLSN
Sbjct: 38 KMGLNGLSN 46


>sp|KPRS_METS3|RIBOSE-PHOSPHATE pyrophosphokinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VRMGPD 6
VR+GPD
Sbjct: 188 VRLGPD 193


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 VRMGPDGL 8
+R GPDG+
Sbjct: 1060 LRAGPDGI 1067


>sp|Y2791_METMA|UPF0758 protein MM_2791|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VRMGPDGLSN 10
++ GP+ LSN
Sbjct: 22 IKNGPESLSN 31


>sp|ARLY_HALMA|ARGININOSUCCINATE lyase|Haloarcula marismortui (strain ATCC 43049

Query: 2 RMGPDG 7
R+GPDG
Sbjct: 104 RVGPDG 109


>sp|CBIA_PICTO|COBYRINATE a,c-diamide synthase|Picrophilus torridus (strain ATCC 700027

Query: 4 GPDGLS 9
GPDG+S
Sbjct: 405 GPDGIS 410


>sp|FDHD_THEAC|SULFUR carrier protein FdhD|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 MGPDGLS 9
+GPDG++
Sbjct: 49 LGPDGIT 55


>sp|AATA3_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain

Query: 1 VRMGPDGL 8
VR+G DGL
Sbjct: 30 VRVGNDGL 37




152|SequenceR|765|756|LTECLVRMGP

>sp|AATC_HALVD|A-TYPE ATP synthase subunit C|Haloferax volcanii (strain ATCC 29605

Query: 5 LVRMGP 10
LVRMGP
Sbjct: 32 LVRMGP 37


>sp|CAS8A_METJA|CRISPR-ASSOCIATED protein Cas8a2/Csa4|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LTECLVRMG 9
+ ECLVR G
Sbjct: 44 VVECLVREG 52


>sp|RNZ_METTH|RIBONUCLEASE Z|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LTECLVRMG 9
L EC+++MG
Sbjct: 97 LHECIMKMG 105




153|SequenceR|770|761|CGPHQLTECL

>sp|AMTAB_METTH|PROBABLE threonylcarbamoyladenosine tRNA

Query: 2 GPHQL 6
GPHQL
Sbjct: 99 GPHQL 103


>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PHQLTECL 10
PH +CL
Sbjct: 528 PHSFNDCL 535


>sp|RNZ_METTH|RIBONUCLEASE Z|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GPHQLTECL 10
G H+L EC+
Sbjct: 93 GIHELHECI 101


>sp|RIBL_METMS|FAD synthase|Methanohalophilus mahii (strain ATCC 35705

Query: 3 PHQLTEC 9
PHQ T C
Sbjct: 119 PHQCTLC 125


>sp|HIS8_HALVD|HISTIDINOL-PHOSPHATE aminotransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 CGPHQLTECL 10
CG L EC+
Sbjct: 325 CGSFGLPECI 334


>sp|Y993_METJA|PUTATIVE hydrogenase expression/formation protein

Query: 1 CGPHQLTEC 9
CG H+ T C
Sbjct: 33 CGSHEHTIC 41


>sp|MFNA_METTH|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanothermobacter

Query: 2 GPHQLTECL 10
GPH+L + L
Sbjct: 311 GPHELADRL 319


>sp|FUCA_METVS|L-FUCULOSE phosphate aldolase|Methanococcus vannielii (strain ATCC 35089

Query: 1 CGPHQLTECL 10
CG +L EC+
Sbjct: 125 CGTLELAECV 134




154|SequenceR|775|766|LRRINCGPHQ

>sp|ARLY_METHJ|ARGININOSUCCINATE lyase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LRRINCGP 8
LRR+NC P
Sbjct: 189 LRRVNCSP 196


>sp|PANB_NATPD|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 RINCGPH 9
++ CGPH
Sbjct: 110 KLECGPH 116


>sp|RIFK_METKA|RIBOFLAVIN kinase|Methanopyrus kandleri (strain AV19 /

Query: 2 RRINCGP 8
RR+ CGP
Sbjct: 137 RRLTCGP 143


>sp|G3PP_METTH|GLYCERALDEHYDE 3-phosphate phosphatase|Methanothermobacter thermautotrophicus

Query: 1 LRRINCGPHQ 10
LRR+ C P +
Sbjct: 160 LRRMGCKPER 169


>sp|TRUB_NANEQ|PROBABLE tRNA pseudouridine synthase B|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LRRINCGP 8
LRRI GP
Sbjct: 211 LRRIKSGP 218


>sp|PDXT_METM5|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 1 LRRINCGPHQ 10
+R+INC P +
Sbjct: 20 VRKINCIPKR 29


>sp|TRUB_THEVO|PROBABLE tRNA pseudouridine synthase B|Thermoplasma volcanium (strain ATCC

Query: 1 LRRINCGPHQ 10
LRRI+ GP +
Sbjct: 163 LRRISTGPFK 172


>sp|SPEH_SACS2|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Saccharolobus solfataricus (strain ATCC

Query: 5 NCGPH 9
+CGPH
Sbjct: 90 SCGPH 94


>sp|SPEH_SACI7|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Saccharolobus islandicus (strain

Query: 5 NCGPH 9
+CGPH
Sbjct: 88 SCGPH 92


>sp|SPEH_SACI6|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Saccharolobus islandicus (strain M.16.4 /

Query: 5 NCGPH 9
+CGPH
Sbjct: 88 SCGPH 92


>sp|SPEH_SACI4|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Saccharolobus islandicus (strain M.14.25

Query: 5 NCGPH 9
+CGPH
Sbjct: 88 SCGPH 92


>sp|SPEH_SACI3|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Saccharolobus islandicus (strain M.16.27)

Query: 5 NCGPH 9
+CGPH
Sbjct: 88 SCGPH 92


>sp|SPEH_SACI2|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Saccharolobus islandicus (strain L.S.2.15

Query: 5 NCGPH 9
+CGPH
Sbjct: 88 SCGPH 92


>sp|SPEH_SACI1|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Saccharolobus islandicus (strain

Query: 5 NCGPH 9
+CGPH
Sbjct: 88 SCGPH 92


>sp|DNAG_METMA|DNA primase DnaG|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 RINCGPH 9
RI CGP+
Sbjct: 160 RIPCGPN 166


>sp|DNAG_METBF|DNA primase DnaG|Methanosarcina barkeri (strain Fusaro /

Query: 3 RINCGPH 9
RI CGP+
Sbjct: 160 RIPCGPN 166


>sp|DNAG_METAC|DNA primase DnaG|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 RINCGPH 9
RI CGP+
Sbjct: 160 RIPCGPN 166


>sp|FURH_ARCFU|FERRIC uptake regulation protein homolog|Archaeoglobus fulgidus (strain

Query: 4 INCGPH 9
+NC PH
Sbjct: 83 VNCEPH 88


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 4 INCGPHQ 10
IN GPH
Sbjct: 188 INIGPHH 194


>sp|IMDH_METJA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 CGPH 9
CGPH
Sbjct: 225 CGPH 228


>sp|TRUB_AERPE|PROBABLE tRNA pseudouridine synthase B|Aeropyrum pernix (strain ATCC 700893

Query: 1 LRRINCGP 8
LRRI GP
Sbjct: 210 LRRIRTGP 217


>sp|Y2172_ARCFU|UNCHARACTERIZED protein AF_2172|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LRRINCGPHQ 10
++ +NC P++
Sbjct: 198 VQEVNCNPYE 207




155|SequenceR|780|771|CRGLWLRRIN

>sp|Y179_ARCFU|UNCHARACTERIZED protein AF_0179|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CRGLWLRRI 9
CRG W+R +
Sbjct: 10 CRGGWMRAV 18


>sp|Y439_PYRHO|PROTEIN PH0439|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RGLWLRRI 9
+G W+RRI
Sbjct: 35 KGFWVRRI 42


>sp|PGK2_METTH|2-PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 CRGLWLRR 8
CR +W RR
Sbjct: 236 CRQMWARR 243


>sp|HMEC_ARCFU|HDR-LIKE menaquinol oxidoreductase cytochrome b-like|Archaeoglobus fulgidus

Query: 4 LWLRRI 9
LWLRRI
Sbjct: 162 LWLRRI 167


>sp|Y274_METJA|UNCHARACTERIZED protein MJ0274|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RGLWLRRIN 10
RG +RRIN
Sbjct: 416 RGFMIRRIN 424


>sp|Y1472_THEKO|PROTEIN TK1472|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RGLWLRRI 9
+G W+RRI
Sbjct: 32 QGYWVRRI 39


>sp|KDPQ_HALS3|PROBABLE Kdp system regulatory protein|Halobacterium salinarum (strain ATCC

Query: 2 RGLWLRR 8
RG WLR+
Sbjct: 235 RGWWLRK 241


>sp|SYTC_METS5|THREONINE--TRNA ligase catalytic subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 RGLWLR 7
RGLWL+
Sbjct: 5 RGLWLK 10


>sp|Y513_METJA|UNCHARACTERIZED protein MJ0513|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CRGLWLRRIN 10
CR +L+RI+
Sbjct: 88 CRAKYLKRID 97


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 4 LWLRRI 9
LWLRR+
Sbjct: 94 LWLRRL 99


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 LWLRRI 9
LWLRR+
Sbjct: 94 LWLRRL 99


>sp|KTHY_METMJ|PROBABLE thymidylate kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 WLRRIN 10
WLRRI+
Sbjct: 110 WLRRIH 115


>sp|PGK2_METFV|2-PHOSPHOGLYCERATE kinase|Methanothermus fervidus (strain ATCC 43054

Query: 1 CRGLWLRR 8
CR W RR
Sbjct: 236 CRQKWARR 243


>sp|PYRH_METS5|URIDYLATE kinase|Metallosphaera sedula (strain ATCC 51363

Query: 3 GLWLRRIN 10
G+W+ R+N
Sbjct: 66 GIWVARLN 73


>sp|ARGC_METAC|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RGLWL 6
RGLWL
Sbjct: 327 RGLWL 331


>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 RGLWL 6
RGLWL
Sbjct: 609 RGLWL 613


>sp|AMYA_PYRHO|ALPHA-AMYLASE horikoshii (strain ATCC 700860

Query: 2 RGLWL 6
RGLWL
Sbjct: 117 RGLWL 121


>sp|PYRH_SULTO|URIDYLATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GLWLRRIN 10
G+W R+N
Sbjct: 68 GIWASRLN 75


>sp|PYRH_SACS2|URIDYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GLWLRRIN 10
G+W R+N
Sbjct: 69 GIWASRLN 76


>sp|PYRH_SACI7|URIDYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 GLWLRRIN 10
G+W R+N
Sbjct: 68 GIWASRLN 75


>sp|PYRH_SACI6|URIDYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 GLWLRRIN 10
G+W R+N
Sbjct: 68 GIWASRLN 75


>sp|PYRH_SACI4|URIDYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 GLWLRRIN 10
G+W R+N
Sbjct: 68 GIWASRLN 75


>sp|PYRH_SACI3|URIDYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 GLWLRRIN 10
G+W R+N
Sbjct: 68 GIWASRLN 75


>sp|PYRH_SACI2|URIDYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 GLWLRRIN 10
G+W R+N
Sbjct: 68 GIWASRLN 75


>sp|PYRH_SACI1|URIDYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 GLWLRRIN 10
G+W R+N
Sbjct: 68 GIWASRLN 75


>sp|LYEL_HALSA|LYCOPENE elongase/hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 1 CRGLWL 6
C G+WL
Sbjct: 207 CAGIWL 212


>sp|RPO10_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo10|Thermoplasma volcanium (strain ATCC

Query: 3 GLWLRRIN 10
G +LRRIN
Sbjct: 19 GRYLRRIN 26




156|SequenceR|785|776|EHSLGCRGLW

>sp|SYS_PYRIL|SERINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 HSLGCRGL 9
H+L C GL
Sbjct: 394 HTLNCTGL 401


>sp|SYS_PYRCJ|SERINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 HSLGCRGL 9
H+L C GL
Sbjct: 395 HTLNCTGL 402


>sp|SYS_PYRAE|SERINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HSLGCRGL 9
H+L C GL
Sbjct: 395 HTLNCTGL 402


>sp|SYS_PYRNV|SERINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 HSLGCRGL 9
H+L C GL
Sbjct: 393 HTLNCTGL 400


>sp|Y120_METTH|PUTATIVE NADH dehydrogenase/NAD(P)H nitroreductase|Methanothermobacter

Query: 2 HSLGCRGLW 10
HSLG +W
Sbjct: 129 HSLGLGAVW 137


>sp|KATG_METB6|CATALASE-PEROXIDASE boonei (strain DSM 21154

Query: 5 GCRGLW 10
GC G+W
Sbjct: 538 GCAGVW 543


>sp|SERC_METAC|PHOSPHOSERINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 LGCRGL 9
LGCRG+
Sbjct: 84 LGCRGV 89


>sp|SERC_METBF|PHOSPHOSERINE aminotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 4 LGCRGL 9
LGCRG+
Sbjct: 84 LGCRGV 89


>sp|SERC_METMA|PHOSPHOSERINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 LGCRGL 9
LGCRG+
Sbjct: 84 LGCRGV 89


>sp|SYS2_METTP|TYPE-2 serine--tRNA ligase|Methanothrix thermoacetophila (strain DSM

Query: 1 EHSLGCRGL 9
+H LG RG+
Sbjct: 86 KHRLGIRGI 94




157|SequenceR|790|781|IDFCCEHSLG

>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 2 DFCCEHS 8
D+CC HS
Sbjct: 563 DYCCVHS 569


>sp|Y045_METTH|MEMO1 family protein MTH_45|Methanothermobacter thermautotrophicus

Query: 1 IDFCCEHSLG 10
I++C EH LG
Sbjct: 23 IEWCFEHELG 32


>sp|TRPCD_ARCFU|TRYPTOPHAN biosynthesis protein TrpCD|Archaeoglobus fulgidus (strain ATCC

Query: 1 IDFCCEHSL 9
+DFC EH +
Sbjct: 120 VDFCFEHGI 128


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 2 DFCCEHSL 9
D+CC H++
Sbjct: 580 DYCCVHAV 587


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 2 DFCCEHS 8
D+CC H+
Sbjct: 564 DYCCVHA 570


>sp|KPRS_METS3|RIBOSE-PHOSPHATE pyrophosphokinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 IDFCCEHSL 9
+D CC H +
Sbjct: 248 VDVCCVHPI 256


>sp|NIFB_METIM|FEMO cofactor biosynthesis protein NifB|Methanocaldococcus infernus

Query: 4 CCEHSLG 10
CCEH G
Sbjct: 51 CCEHRPG 57


>sp|Y963_METKA|MEMO1 family protein MK0963|Methanopyrus kandleri (strain AV19 /

Query: 1 IDFCCEHSLG 10
I++C H LG
Sbjct: 23 IEWCFRHELG 32


>sp|PYRG_HALWD|CTP synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IDFCCEHSL 9
I++C EH++
Sbjct: 377 IEYCREHNV 385




158|SequenceR|795|786|SLVLSIDFCC

>sp|KPRS_METS3|RIBOSE-PHOSPHATE pyrophosphokinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 5 SIDFCC 10
S+D CC
Sbjct: 247 SVDVCC 252


>sp|DOXA_ACIAM|THIOSULFATE dehydrogenase [quinone] small subunit|Acidianus ambivalens

Query: 2 LVLSIDFCC 10
L+L+I CC
Sbjct: 59 LILNITDCC 67




159|SequenceR|800|791|LKQNSSLVLS

>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LKQNSSLVL 9
+KQNSSLV
Sbjct: 691 MKQNSSLVF 699


>sp|Y1341_METJA|UNCHARACTERIZED protein MJ1341|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LKQNSSLVLS 10
LK+NSSL+L+
Sbjct: 102 LKENSSLILT 111




160|SequenceR|805|796|LDLEVLKQNS

>sp|KATG_HALSA|CATALASE-PEROXIDASE salinarum (strain ATCC 700922

Query: 1 LDLEVLKQNS 10
LDLE+L QNS
Sbjct: 18 LDLEILDQNS 27


>sp|KATG_HALS3|CATALASE-PEROXIDASE salinarum (strain ATCC 29341

Query: 1 LDLEVLKQNS 10
LDLE+L QNS
Sbjct: 18 LDLEILDQNS 27


>sp|KATG2_HALMA|CATALASE-PEROXIDASE 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 LDLEVLKQNS 10
L+LE+L QN+
Sbjct: 31 LNLEILDQNA 40


>sp|PURL_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LDLEVLKQNS 10
+DLEV K+N+
Sbjct: 577 VDLEVEKRNA 586


>sp|PUS10_THEAM|TRNA pseudouridine synthase Pus10|Thermosphaera aggregans (strain DSM

Query: 2 DLEVLKQNS 10
D+E+LKQ S
Sbjct: 318 DIELLKQTS 326


>sp|QUEC_METM7|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 LDLEVLK 7
LDLEVLK
Sbjct: 184 LDLEVLK 190


>sp|PYCB_METTH|PYRUVATE carboxylase subunit B|Methanothermobacter thermautotrophicus

Query: 1 LDLEVLK 7
LDLE+LK
Sbjct: 258 LDLEILK 264


>sp|Y738_METVS|UPF0210 protein Mevan_0738|Methanococcus vannielii (strain ATCC 35089

Query: 2 DLEVLKQN 9
DL++LK+N
Sbjct: 37 DLDLLKEN 44


>sp|Y672_METM7|UPF0210 protein MmarC7_0672|Methanococcus maripaludis (strain C7 /

Query: 2 DLEVLKQN 9
DL++LK+N
Sbjct: 37 DLDLLKEN 44


>sp|Y151_METM5|UPF0210 protein MmarC5_0151|Methanococcus maripaludis (strain C5 /

Query: 2 DLEVLKQN 9
DL++LK+N
Sbjct: 37 DLDLLKEN 44


>sp|Y1246_METM6|UPF0210 protein MmarC6_1246|Methanococcus maripaludis (strain C6 /

Query: 2 DLEVLKQN 9
DL++LK+N
Sbjct: 37 DLDLLKEN 44


>sp|QUEC_METMP|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LDLEVLK 7
LDLEVLK
Sbjct: 184 LDLEVLK 190


>sp|Y1427_METMP|UPF0210 protein MMP1427|Methanococcus maripaludis (strain DSM 14266

Query: 2 DLEVLKQN 9
DL++LK+N
Sbjct: 37 DLDLLKEN 44


>sp|Y699_METJA|UNCHARACTERIZED protein MJ0699|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DLEVLKQNS 10
DLE+LK+N+
Sbjct: 245 DLELLKENN 253


>sp|LYSW_SACS2|ALPHA-AMINOADIPATE/GLUTAMATE carrier protein LysW|Saccharolobus solfataricus (strain ATCC

Query: 3 LEVLKQNS 10
LEV+KQN
Sbjct: 33 LEVVKQNG 40




161|SequenceR|810|801|LANDSLDLEV

>sp|FRHA_METTH|COENZYME F420 hydrogenase subunit alpha|Methanothermobacter

Query: 3 NDSLDLEV 10
+DSLD+EV
Sbjct: 79 DDSLDIEV 86


>sp|PHR_METTM|DEOXYRIBODIPYRIMIDINE photo-lyase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 LANDSLDLE 9
LA DSLDL+
Sbjct: 182 LAVDSLDLD 190


>sp|RL3_METST|LARGE ribosomal subunit protein uL3|Methanosphaera stadtmanae (strain

Query: 1 LANDSLDLEV 10
+AND+LD E+
Sbjct: 101 IANDNLDDEL 110


>sp|VHUB_METJA|POLYFERREDOXIN protein VhuB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DSLDLEV 10
D+LDLEV
Sbjct: 253 DALDLEV 259


>sp|PHR_METTH|DEOXYRIBODIPYRIMIDINE photo-lyase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LANDSLDLE 9
L DSLDLE
Sbjct: 182 LKMDSLDLE 190


>sp|Y1472_METJA|UNCHARACTERIZED protein MJ1472|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NDSLDLE 9
ND+LD+E
Sbjct: 424 NDTLDIE 430


>sp|TSGDD_HALVD|GLUCOSE import ATP-binding protein TsgD13|Haloferax volcanii (strain ATCC

Query: 1 LANDSLDLEV 10
+AND +DL V
Sbjct: 20 VANDHIDLTV 29




162|SequenceR|815|806|IGFDGLANDS

>sp|ARLY_METBF|ARGININOSUCCINATE lyase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IGFDGLANDS 10
+GFDGL +S
Sbjct: 215 LGFDGLLENS 224


>sp|ARLY_METBU|ARGININOSUCCINATE lyase|Methanococcoides burtonii (strain DSM 6242

Query: 1 IGFDGLANDS 10
+GFDGL +S
Sbjct: 215 LGFDGLIENS 224


>sp|ARLY_ARCFU|ARGININOSUCCINATE lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IGFDGLANDS 10
+GFDG+ S
Sbjct: 208 LGFDGVVEHS 217


>sp|ARLY_METMA|ARGININOSUCCINATE lyase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IGFDGLANDS 10
+GF+GL +S
Sbjct: 215 LGFEGLLENS 224


>sp|ARLY_METAC|ARGININOSUCCINATE lyase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IGFDGLANDS 10
+GF+GL +S
Sbjct: 215 LGFEGLLENS 224


>sp|YNI1_METIV|UNCHARACTERIZED protein in nifH2 5'region|Methanobacterium ivanovii

Query: 1 IGFDGLAND 9
+G++ +AND
Sbjct: 36 VGYEEIAND 44




163|SequenceR|820|811|VCLLRIGFDG

>sp|Y857_METTH|PROTEIN MTH_857|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 LLRIGFDG 10
L+R+G DG
Sbjct: 124 LIRVGVDG 131


>sp|GLNA_METJA|GLUTAMINE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CLLRIGFDG 10
C+L G DG
Sbjct: 360 CMLAAGLDG 368




164|SequenceR|825|816|LHKLGVCLLR

>sp|GUAAA_SULTO|GMP synthase [glutamine-hydrolyzing] subunit A|Sulfurisphaera

Query: 3 KLGVCL 8
KLG+CL
Sbjct: 75 KLGICL 80


>sp|GUAAA_SULAC|GMP synthase [glutamine-hydrolyzing] subunit A|Sulfolobus

Query: 3 KLGVCL 8
KLG+CL
Sbjct: 75 KLGICL 80


>sp|HEM3_SULTO|PROBABLE porphobilinogen deaminase|Sulfurisphaera tokodaii (strain DSM

Query: 1 LHKLGV 6
LHKLG+
Sbjct: 24 LHKLGI 29


>sp|END4_THEAC|PROBABLE endonuclease 4|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 KLGVCL 8
KLGVC+
Sbjct: 175 KLGVCI 180




165|SequenceR|830|821|KLNCLLHKLG

>sp|SUCC1_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit beta|Archaeoglobus fulgidus (strain

Query: 3 NCLLHKL 9
NCLLH L
Sbjct: 292 NCLLHVL 298


>sp|RADA_IGNH4|DNA repair and recombination protein|Ignicoccus hospitalis (strain

Query: 1 KLNCLLHKLG 10
KLN LH+LG
Sbjct: 235 KLNKHLHQLG 244


>sp|Y403_METJA|MEMO1 family protein MJ0403|Methanocaldococcus jannaschii (strain ATCC

Query: 4 CLLHKLG 10
C LHK G
Sbjct: 28 CYLHKFG 34


>sp|RPO5_METLZ|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanocorpusculum labreanum (strain

Query: 1 KLNCLLHKL 9
+LN LLH++
Sbjct: 3 RLNVLLHEM 11


>sp|CDC45_SULAC|CELL division control protein 45|Sulfolobus acidocaldarius (strain ATCC

Query: 1 KLNCLLHKL 9
KLN LL+K+
Sbjct: 193 KLNTLLYKI 201


>sp|URED_CENSY|UREASE accessory protein UreD|Cenarchaeum symbiosum (strain A)

Query: 3 NCLLHKL 9
NC +HK+
Sbjct: 98 NCAIHKM 104


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 4 CLLHK 8
CLLHK
Sbjct: 193 CLLHK 197


>sp|Y2784_METAR|UPF0179 protein UNCMA_27840|Methanocella arvoryzae (strain DSM 22066

Query: 1 KLNCLLHKLG 10
+L+CL+H G
Sbjct: 59 ELDCLVHDTG 68




166|SequenceR|835|826|VLWLKKLNCL

>sp|TTH_ACIAM|TETRATHIONATE hydrolase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 VLWLKKLNCL 10
+LW KL CL
Sbjct: 441 ILWSTKLPCL 450


>sp|IPK_METTH|ISOPENTENYL phosphate kinase|Methanothermobacter thermautotrophicus (strain

Query: 3 WLKKLN 8
W+KKLN
Sbjct: 83 WVKKLN 88


>sp|HELS_ARCFU|ATP-DEPENDENT DNA helicase Hel308|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WLKKLNCL 10
W+K ++CL
Sbjct: 135 WIKAVSCL 142


>sp|ARADH_SACS2|D-ARABINOSE 1-dehydrogenase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 3 WLKKLNCL 10
WL KLN L
Sbjct: 138 WLVKLNSL 145


>sp|POK_METJA|PANTOATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LWLKKLN 8
+W+KK+N
Sbjct: 179 IWIKKIN 185


>sp|PDXT_THEKO|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Thermococcus kodakarensis

Query: 1 VLWLKK 6
V+WLKK
Sbjct: 33 VIWLKK 38


>sp|PDXT_THEGJ|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Thermococcus gammatolerans

Query: 1 VLWLKK 6
V+WLKK
Sbjct: 33 VIWLKK 38


>sp|Y1631_METJA|UNCHARACTERIZED protein MJ1631|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WLKKLNCL 10
W+K NC+
Sbjct: 490 WMKACNCV 497


>sp|SYL_THEVO|LEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 WLKKLN 8
WLKKL+
Sbjct: 452 WLKKLS 457


>sp|MTM7_METJA|PUTATIVE type II methyltransferase M.MjaORF1200P|Methanocaldococcus

Query: 1 VLWLKKLNCL 10
+ WLK+L L
Sbjct: 82 IKWLKRLGTL 91


>sp|TRUB_THEGJ|PROBABLE tRNA pseudouridine synthase B|Thermococcus gammatolerans (strain

Query: 1 VLWLKKL 7
V W+KKL
Sbjct: 63 VAWIKKL 69


>sp|PDXT_METVS|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus vannielii

Query: 4 LKKLNCL 10
+KK+NC+
Sbjct: 20 VKKINCI 26


>sp|PDXT_METMP|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 4 LKKLNCL 10
+KK+NC+
Sbjct: 20 VKKINCI 26


>sp|PDXT_METM6|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 4 LKKLNCL 10
+KK+NC+
Sbjct: 20 VKKINCI 26




167|SequenceR|840|831|TLCCSVLWLK

>sp|Y3407_METJA|UNCHARACTERIZED protein MJECS07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CSVLWLK 10
CS+ WLK
Sbjct: 407 CSIKWLK 413


>sp|YPZ4_METTF|UNCHARACTERIZED protein ORF4'|Methanothermobacter thermautotrophicus

Query: 2 LCCSVLWL 9
LC +LWL
Sbjct: 10 LCGGILWL 17


>sp|YPV4_METTF|UNCHARACTERIZED protein ORF4|Methanothermobacter thermautotrophicus

Query: 2 LCCSVLWL 9
LC +LWL
Sbjct: 10 LCGDILWL 17


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LCCSVLW 8
+CC LW
Sbjct: 56 VCCDDLW 62


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 3 CCSVLW 8
CC LW
Sbjct: 19 CCDELW 24




168|SequenceR|845|836|QCCASTLCCS

>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 2 CCASTLC 8
CC TLC
Sbjct: 332 CCTPTLC 338


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 QCCASTLCCS 10
Q CA T C S
Sbjct: 709 QACAGTHCQS 718


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 QCCASTLCCS 10
Q CA T C S
Sbjct: 707 QACAGTHCDS 716




169|SequenceR|850|841|VSALDQCCAS

***** No hits found ******


170|SequenceR|855|846|HSTSLVSALD

***** No hits found ******


171|SequenceR|860|851|LRTLSHSTSL

***** No hits found ******


172|SequenceR|865|856|NEGVYLRTLS

>sp|PCNA1_PYRAE|DNA polymerase sliding clamp 1|Pyrobaculum aerophilum (strain ATCC

Query: 1 NEGVYLRTL 9
N+G+YLR L
Sbjct: 34 NDGLYLRAL 42


>sp|Y993_METJA|PUTATIVE hydrogenase expression/formation protein MJ0993|Methanocaldococcus

Query: 1 NEGVYL 6
NEGVYL
Sbjct: 178 NEGVYL 183


>sp|Y727_METJA|UNCHARACTERIZED protein MJ0727|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NEGVYLRTLS 10
NEG YLR ++
Sbjct: 51 NEGQYLREIA 60


>sp|TRMY_NATPD|TRNA (pseudouridine(54)-N(1))-methyltransferase|Natronomonas pharaonis

Query: 3 GVYLRTLS 10
GVY+RT S
Sbjct: 104 GVYIRTQS 111


>sp|RTCB_METTH|TRNA-SPLICING ligase RtcB|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 NEGVYLRTLS 10
+EG+Y+R S
Sbjct: 431 SEGIYVRATS 440


>sp|PCNA2_SULAC|DNA polymerase sliding clamp 2|Sulfolobus acidocaldarius (strain ATCC

Query: 2 EGVYLRTLS 10
+G YLRT S
Sbjct: 101 DGEYLRTFS 109


>sp|TRUB_METM7|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain C7

Query: 1 NEGVYLRTL 9
NE VYL+ L
Sbjct: 195 NEAVYLQDL 203


>sp|TRUB_METMP|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain DSM

Query: 1 NEGVYLRTL 9
NE VYL+ L
Sbjct: 195 NEAVYLQDL 203


>sp|TRUB_METM5|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain C5

Query: 1 NEGVYLRTL 9
NE VYL+ L
Sbjct: 195 NEAVYLQDL 203


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NEGVYLRTLS 10
N G+Y+R S
Sbjct: 820 NRGIYVRAAS 829


>sp|TRUB_METM6|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain C6

Query: 1 NEGVYLRTL 9
NE VYL+ L
Sbjct: 195 NEAVYLQDL 203


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 1 NEGVYLRTLS 10
N G+Y+R S
Sbjct: 865 NRGIYVRAAS 874


>sp|TRUB_META3|PROBABLE tRNA pseudouridine synthase B|Methanococcus aeolicus (strain ATCC

Query: 3 GVYLRTLS 10
G Y+RTL+
Sbjct: 161 GTYIRTLA 168


>sp|OGT_PYRFU|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NEGVYLRTLS 10
N+ VY+ TLS
Sbjct: 12 NKAVYIGTLS 21




173|SequenceR|870|861|SDGLANEGVY

>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 1 SDGLANEG 8
S+GL NEG
Sbjct: 497 SNGLKNEG 504


>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 1 SDGLANEG 8
S+GL NEG
Sbjct: 498 SNGLKNEG 505


>sp|CARA_PYRAE|CARBAMOYL phosphate synthase small chain|Pyrobaculum aerophilum (strain

Query: 1 SDGLANEGV 9
SDG+ EGV
Sbjct: 64 SDGIKAEGV 72


>sp|Y2966_METMA|UPF0282 protein MM_2966|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SDGLANEGV 9
S+G+++EGV
Sbjct: 132 SEGISSEGV 140


>sp|APGM_THEAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SDGLANEGVY 10
+DG+ N+GV+
Sbjct: 360 TDGVMNDGVH 369




174|SequenceR|875|866|LIAVGSDGLA

>sp|DNLI_PYRAY|DNA ligase|Pyrococcus abyssi

Query: 1 LIAVGSDG 8
L+A+G DG
Sbjct: 300 LVAIGEDG 307


>sp|DNLI_PYRAB|DNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 LIAVGSDG 8
L+A+G DG
Sbjct: 300 LVAIGEDG 307


>sp|NADK_THEGJ|NAD kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LIAVGSDG 8
+IA+G DG
Sbjct: 61 IIAIGGDG 68


>sp|NADK_PYRAB|NAD kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 LIAVGSDG 8
+IA+G DG
Sbjct: 61 IIAIGGDG 68


>sp|NADK_PYRFU|NAD kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LIAVGSDG 8
+IA+G DG
Sbjct: 61 IIAIGGDG 68


>sp|DADD_METST|5'-DEOXYADENOSINE deaminase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 IAVGSDGLA 10
+A+G+DG++
Sbjct: 293 VAIGTDGVS 301


>sp|NADK_THESM|NAD kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 LIAVGSDG 8
+IA+G DG
Sbjct: 61 IIAIGGDG 68


>sp|TRPA_SULAC|TRYPTOPHAN synthase alpha chain|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IAVGSDGLA 10
++VG+DG+A
Sbjct: 206 MSVGADGIA 214


>sp|RL3_METH6|LARGE ribosomal subunit protein uL3|Methanothrix harundinacea (strain

Query: 1 LIAVGSDGLA 10
++A+GSDG A
Sbjct: 265 VLAIGSDGGA 274


>sp|PORB_METJA|PYRUVATE synthase subunit PorB|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LIAVGSDG 8
+IA+G DG
Sbjct: 100 VIAIGGDG 107


>sp|THIE_METAR|THIAMINE-PHOSPHATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LIAVGSDGLA 10
++A G+DGLA
Sbjct: 172 VLAAGADGLA 181


>sp|NADK_SACI7|NAD kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LIAVGSDG 8
+IAVG DG
Sbjct: 39 VIAVGGDG 46


>sp|NADK_SACI6|NAD kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LIAVGSDG 8
+IAVG DG
Sbjct: 39 VIAVGGDG 46


>sp|NADK_SACI4|NAD kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LIAVGSDG 8
+IAVG DG
Sbjct: 39 VIAVGGDG 46


>sp|NADK_SACI3|NAD kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 LIAVGSDG 8
+IAVG DG
Sbjct: 39 VIAVGGDG 46


>sp|NADK_SACI2|NAD kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LIAVGSDG 8
+IAVG DG
Sbjct: 39 VIAVGGDG 46


>sp|NADK_SACI1|NAD kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LIAVGSDG 8
+IAVG DG
Sbjct: 39 VIAVGGDG 46


>sp|DNLI_METPE|DNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 LIAVGSDG 8
+IA+G+DG
Sbjct: 297 VIAIGADG 304


>sp|NADK_SACS2|NAD kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LIAVGSDG 8
+IAVG DG
Sbjct: 39 VIAVGGDG 46


>sp|NADK_PYRHO|NAD kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LIAVGSDG 8
++A+G DG
Sbjct: 61 IVAIGGDG 68


>sp|THIE_METMJ|THIAMINE-PHOSPHATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LIAVGSDGLA 10
+IA G+DG+A
Sbjct: 172 VIAAGADGVA 181


>sp|MTAD_PYRFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IAVGSDGLA 10
+A+G+DG A
Sbjct: 289 VALGTDGAA 297




175|SequenceR|880|871|KAKECLIAVG

>sp|DLDH2_HALMA|DIHYDROLIPOYL dehydrogenase 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 AKECLIAVG 10
A++CL+AVG
Sbjct: 269 AEKCLVAVG 277


>sp|Y504_METJA|UNCHARACTERIZED protein MJ0504|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KAKECLIAVG 10
KAKE +IA+G
Sbjct: 144 KAKEEVIAIG 153




176|SequenceR|885|876|NCQPNKAKEC

>sp|NPD1_ARCFU|NAD-DEPENDENT protein deacylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NCQPNKAKE 9
N QPNKA +
Sbjct: 73 NAQPNKAHQ 81


>sp|PURT_METVS|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus vannielii

Query: 2 CQPNKAK 8
C P KAK
Sbjct: 238 CSPTKAK 244




177|SequenceR|890|881|GLKQLNCQPN

>sp|CDC65_HALSA|ORC1-TYPE DNA replication protein 5|Halobacterium salinarum (strain ATCC

Query: 1 GLKQLNCQP 9
G+ Q+NCQP
Sbjct: 87 GVVQVNCQP 95


>sp|EF2_METJA|ELONGATION factor 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLKQLNCQPN 10
G LNC PN
Sbjct: 280 GKAMLNCDPN 289


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 KQLNCQPN 10
KQLNC N
Sbjct: 846 KQLNCNEN 853


>sp|Y296_METJA|PROBABLE metallo-hydrolase MJ0296|Methanocaldococcus jannaschii (strain

Query: 1 GLKQLNCQPN 10
GL +LN PN
Sbjct: 68 GLSELNLSPN 77


>sp|DNLI_METS3|DNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GLKQLNCQP 9
GLK+LN P
Sbjct: 210 GLKELNLTP 218


>sp|SYFA_SULAC|PHENYLALANINE--TRNA ligase alpha subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LKQLNCQPN 10
LK+LN QP+
Sbjct: 78 LKELNGQPS 86


>sp|THTR_METTH|PUTATIVE thiosulfate sulfurtransferase|Methanothermobacter

Query: 5 LNCQPN 10
++CQPN
Sbjct: 29 IDCQPN 34


>sp|Y090_METJA|UNCHARACTERIZED protease MJ0090|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLKQLNCQPN 10
GLK+LN + N
Sbjct: 31 GLKELNMRAN 40


>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GLKQLNCQPN 10
G +NC PN
Sbjct: 280 GKAMVNCDPN 289


>sp|SYT_NATPD|THREONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GLKQLNC 7
GLK +NC
Sbjct: 328 GLKPMNC 334


>sp|SYT_HALWD|THREONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GLKQLNC 7
GLK +NC
Sbjct: 328 GLKPMNC 334


>sp|SYT_HALSA|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GLKQLNC 7
GLK +NC
Sbjct: 328 GLKPMNC 334


>sp|SYT_HALS3|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GLKQLNC 7
GLK +NC
Sbjct: 328 GLKPMNC 334


>sp|SYT_HALMA|THREONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GLKQLNC 7
GLK +NC
Sbjct: 328 GLKPMNC 334


>sp|SYTC_SULTO|THREONINE--TRNA ligase catalytic subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GLKQLNC 7
GLK +NC
Sbjct: 220 GLKPMNC 226


>sp|TFE_SULAC|TRANSCRIPTION factor E|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 KQLNCQPN 10
K+LN +PN
Sbjct: 34 KELNTKPN 41




178|SequenceR|895|886|GSNVLGLKQL

>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GSNVLGLKQL 10
G NV+GLK+L
Sbjct: 223 GGNVIGLKKL 232


>sp|PCKG_THESM|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus sibiricus (strain DSM 12597

Query: 1 GSNVLGLKQL 10
G N +GLK+L
Sbjct: 221 GGNTIGLKKL 230


>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GSNVLGLKQL 10
G N +GLK+L
Sbjct: 221 GGNTIGLKKL 230


>sp|PCKG_PYRHO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GSNVLGLKQL 10
G N +GLK+L
Sbjct: 218 GGNTIGLKKL 227


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 1 GSNVLGLKQL 10
G N +GLK+L
Sbjct: 218 GGNTIGLKKL 227


>sp|AATA_METBU|A-TYPE ATP synthase subunit A|Methanococcoides burtonii (strain DSM 6242

Query: 1 GSNVLGLKQ 9
G N+LGL Q
Sbjct: 131 GGNILGLVQ 139


>sp|PYRG_AERPE|CTP synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 NVLGLKQ 9
NVLGLK+
Sbjct: 398 NVLGLKE 404


>sp|CSL4_SACS2|EXOSOME complex component Csl4|Saccharolobus solfataricus (strain ATCC

Query: 2 SNVLGLKQL 10
SNVLG K++
Sbjct: 50 SNVLGFKKI 58


>sp|MFNA_THEGJ|PROBABLE L-aspartate decarboxylase|Thermococcus gammatolerans (strain DSM

Query: 2 SNVLGLKQ 9
SN+LGLK+
Sbjct: 76 SNLLGLKK 83


>sp|MTTB2_METAC|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina acetivorans (strain ATCC

Query: 1 GSNVLGLKQ 9
G+N L LKQ
Sbjct: 415 GNNFLALKQ 423


>sp|MTTB2_METMA|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GSNVLGLKQ 9
G+N L LKQ
Sbjct: 415 GNNFLALKQ 423


>sp|MTTB_METBF|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri (strain Fusaro /

Query: 1 GSNVLGLKQ 9
G+N L LKQ
Sbjct: 415 GNNFLALKQ 423


>sp|EF1A_METHJ|ELONGATION factor 1-alpha|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 SNVLGLKQL 10
S LG+KQL
Sbjct: 133 SKTLGIKQL 141


>sp|MTTB_METBA|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri

Query: 1 GSNVLGLKQ 9
G+N L LKQ
Sbjct: 415 GNNFLALKQ 423


>sp|MTTB_METTE|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina thermophila

Query: 1 GSNVLGLKQ 9
G+N L LKQ
Sbjct: 415 GNNFLALKQ 423


>sp|MTTB1_METAC|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina acetivorans (strain ATCC

Query: 1 GSNVLGLKQ 9
G+N L LKQ
Sbjct: 415 GNNFLALKQ 423


>sp|MTTB1_METMA|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GSNVLGLKQ 9
G+N L LKQ
Sbjct: 415 GNNFLALKQ 423


>sp|PYRG_SULAC|CTP synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 NVLGLKQ 9
NVLGLK+
Sbjct: 394 NVLGLKE 400


>sp|PDXT_META3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus aeolicus (strain

Query: 1 GSNVLGLKQ 9
G N++G+KQ
Sbjct: 147 GGNIVGVKQ 155




179|SequenceR|900|891|CVSTLGSNVL

>sp|NASC_HALMT|PROBABLE molybdenum cofactor guanylyltransferase|Haloferax mediterranei

Query: 2 VSTLGSNVL 10
+STLG NVL
Sbjct: 172 MSTLGVNVL 180


>sp|CBIM_METST|PUTATIVE cobalt transport protein CbiM|Methanosphaera stadtmanae (strain

Query: 2 VSTLGSNVL 10
++TLG+NVL
Sbjct: 105 ITTLGANVL 113


>sp|Y1064_METJA|UNCHARACTERIZED acetyltransferase MJ1064|Methanocaldococcus jannaschii (strain ATCC

Query: 4 TLGSNVL 10
T+GSNVL
Sbjct: 124 TIGSNVL 130


>sp|MPTA_METBF|GTP cyclohydrolase MptA|Methanosarcina barkeri (strain Fusaro /

Query: 1 CVSTLGSNVL 10
CV T+ NV+
Sbjct: 265 CVRTMADNVV 274


>sp|CBIM_METV3|PUTATIVE cobalt transport protein CbiM|Methanococcus voltae (strain ATCC

Query: 2 VSTLGSNVL 10
+STLG+N+
Sbjct: 105 ISTLGANIF 113




180|SequenceR|905|896|SLASCCVSTL

>sp|ADPRH_METOA|PROTEIN-ADP-RIBOSE hydrolase|Methanobrevibacter oralis

Query: 1 SLASCCVST 9
S+A CC+ST
Sbjct: 200 SIAFCCIST 208




181|SequenceR|910|901|TSLVSSLASC

***** No hits found ******


182|SequenceR|915|906|TLNQNTSLVS

>sp|NADB_SACS2|L-ASPARTATE oxidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TLNQNTSLVS 10
T N N SLVS
Sbjct: 423 TFNDNASLVS 432


>sp|Y798_METJA|TPR repeat-containing protein MJ0798|Methanocaldococcus jannaschii

Query: 2 LNQNTSLV 9
LNQNT L+
Sbjct: 131 LNQNTELL 138




183|SequenceR|920|911|RLYLHTLNQN

>sp|NIFH_METAR|NITROGENASE iron protein|Methanocella arvoryzae (strain DSM 22066

Query: 1 RLYLHTLNQ 9
RL LH LNQ
Sbjct: 45 RLLLHGLNQ 53


>sp|SYS_STAMF|SERINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 YLHTLN 8
YLHTLN
Sbjct: 401 YLHTLN 406


>sp|SYS_HALWD|SERINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 YLHTLN 8
YLHTLN
Sbjct: 398 YLHTLN 403


>sp|SYS_HALMA|SERINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 YLHTLN 8
YLHTLN
Sbjct: 398 YLHTLN 403


>sp|SYS_PYRAE|SERINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RLYLHTLN 8
R Y+HTLN
Sbjct: 391 REYVHTLN 398


>sp|SYS_HYPBU|SERINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 RLYLHTLN 8
R Y+HTLN
Sbjct: 400 REYVHTLN 407


>sp|SYS_SULAC|SERINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 YLHTLN 8
YLHTLN
Sbjct: 398 YLHTLN 403


>sp|NEP1_PYRAR|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum arsenaticum

Query: 1 RLYLHTL 7
R+Y+HTL
Sbjct: 82 RMYIHTL 88


>sp|SYS_AERPE|SERINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 RLYLHTLN 8
R Y+HTLN
Sbjct: 400 RGYVHTLN 407


>sp|SYS_SACI6|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 RLYLHTLN 8
R Y+HTLN
Sbjct: 397 RGYVHTLN 404


>sp|SYS_SACI4|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 RLYLHTLN 8
R Y+HTLN
Sbjct: 397 RGYVHTLN 404


>sp|SYS_SACI3|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 RLYLHTLN 8
R Y+HTLN
Sbjct: 397 RGYVHTLN 404


>sp|SYS_SACI2|SERINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 RLYLHTLN 8
R Y+HTLN
Sbjct: 397 RGYVHTLN 404


>sp|SYS_SACI1|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 RLYLHTLN 8
R Y+HTLN
Sbjct: 397 RGYVHTLN 404


>sp|NEP1_METTP|RIBOSOMAL RNA small subunit methyltransferase|Methanothrix thermoacetophila

Query: 1 RLYLHTLN 8
R+Y+HT N
Sbjct: 83 RVYIHTRN 90


>sp|SYS_SACI7|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 RLYLHTLN 8
R Y+HTLN
Sbjct: 397 RGYVHTLN 404


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 4 LHTLNQN 10
+HTLN+N
Sbjct: 73 VHTLNEN 79


>sp|SYS_SACS2|SERINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RLYLHTLN 8
R Y+HTLN
Sbjct: 397 RGYVHTLN 404


>sp|NEP1_ARCFU|RIBOSOMAL RNA small subunit methyltransferase|Archaeoglobus fulgidus

Query: 2 LYLHTLN 8
+Y+HTLN
Sbjct: 82 VYVHTLN 88


>sp|SYS_NITMS|SERINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 YLHTLN 8
Y+HTLN
Sbjct: 376 YIHTLN 381


>sp|RS4E_METAC|SMALL ribosomal subunit protein eS4|Methanosarcina acetivorans (strain

Query: 1 RLYLHTLNQ 9
RL LH LN+
Sbjct: 103 RLTLHKLNE 111


>sp|SYS_SULTO|SERINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 YLHTLN 8
Y+HTLN
Sbjct: 398 YVHTLN 403


>sp|SYS_PYRHO|SERINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 YLHTLN 8
Y+HTLN
Sbjct: 399 YVHTLN 404


>sp|SYS_PYRFU|SERINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 YLHTLN 8
Y+HTLN
Sbjct: 399 YVHTLN 404


>sp|SYS_PYRCJ|SERINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 YLHTLN 8
Y+HTLN
Sbjct: 393 YVHTLN 398


>sp|SYS_PYRAB|SERINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 YLHTLN 8
Y+HTLN
Sbjct: 399 YVHTLN 404


>sp|SYS_CENSY|SERINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 3 YLHTLN 8
Y+HTLN
Sbjct: 374 YVHTLN 379


>sp|RL30_SACI6|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 RLYLHTLNQ 9
++YLH L+Q
Sbjct: 106 KIYLHKLDQ 114


>sp|RL30_SACI4|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 RLYLHTLNQ 9
++YLH L+Q
Sbjct: 106 KIYLHKLDQ 114


>sp|RL30_SACI3|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 RLYLHTLNQ 9
++YLH L+Q
Sbjct: 106 KIYLHKLDQ 114


>sp|RL30_SACI2|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 RLYLHTLNQ 9
++YLH L+Q
Sbjct: 106 KIYLHKLDQ 114


>sp|RL30_SACI1|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 RLYLHTLNQ 9
++YLH L+Q
Sbjct: 106 KIYLHKLDQ 114


>sp|MCRA_METVO|METHYL-COENZYME M reductase subunit alpha|Methanococcus voltae

Query: 3 YLHTLNQN 10
Y+HT+N +
Sbjct: 136 YMHTINHS 143


>sp|SYS_METAR|SERINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 YLHTLN 8
Y+HTLN
Sbjct: 380 YVHTLN 385


>sp|TKSP_THEKO|SUBTILISIN-LIKE serine protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LYLHTLNQN 10
LYL+ NQN
Sbjct: 607 LYLYDPNQN 615


>sp|SYS_METMJ|SERINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 YLHTLN 8
Y+HTLN
Sbjct: 380 YVHTLN 385


>sp|RL30_SACI7|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 RLYLHTLNQ 9
++YLH L+Q
Sbjct: 106 KIYLHKLDQ 114


>sp|SYS_HALLT|SERINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 YLHTLN 8
+LHTLN
Sbjct: 397 FLHTLN 402


>sp|MCRA_METVA|METHYL-COENZYME M reductase subunit alpha|Methanococcus vannielii

Query: 3 YLHTLNQ 9
Y+HT+N
Sbjct: 136 YMHTINH 142


>sp|GVPE_HALMT|TRANSCRIPTIONAL activator GvpE|Haloferax mediterranei (strain ATCC 33500

Query: 3 YLHTLN 8
YLHT+N
Sbjct: 71 YLHTIN 76


>sp|NEP1_THEON|RIBOSOMAL RNA small subunit methyltransferase|Thermococcus onnurineus

Query: 1 RLYLHTLN 8
R+Y+HT N
Sbjct: 83 RVYVHTRN 90


>sp|Y2307_ARCFU|UNCHARACTERIZED protein AF_2307|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RLYLHTLNQ 9
RLY + +NQ
Sbjct: 177 RLYFYRINQ 185


>sp|NEP1_THEKO|RIBOSOMAL RNA small subunit methyltransferase|Thermococcus kodakarensis

Query: 1 RLYLHTLN 8
R+Y+HT N
Sbjct: 83 RVYVHTRN 90


>sp|NEP1_PYRFU|RIBOSOMAL RNA small subunit methyltransferase|Pyrococcus furiosus (strain

Query: 1 RLYLHTLN 8
R+Y+HT N
Sbjct: 86 RVYVHTRN 93


>sp|F16PA_METHJ|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 RLYLHTLN 8
++Y HTLN
Sbjct: 50 QMYEHTLN 57


>sp|NEP1_PYRHO|RIBOSOMAL RNA small subunit methyltransferase|Pyrococcus horikoshii (strain

Query: 1 RLYLHTLN 8
R+Y+HT N
Sbjct: 88 RVYVHTRN 95


>sp|SYS_DESA1|SERINE--TRNA ligase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 3 YLHTLN 8
Y+HTLN
Sbjct: 401 YVHTLN 406


>sp|NEP1_PYRAB|RIBOSOMAL RNA small subunit methyltransferase|Pyrococcus abyssi (strain GE5

Query: 1 RLYLHTLN 8
R+Y+HT N
Sbjct: 88 RVYVHTRN 95


>sp|NEP1_THEVO|RIBOSOMAL RNA small subunit methyltransferase|Thermoplasma volcanium

Query: 1 RLYLHTLN 8
R Y+HT N
Sbjct: 85 RTYIHTRN 92




184|SequenceR|925|916|GLTNGRLYLH

>sp|Y1098_METVS|PUTATIVE transcriptional regulatory protein Mevan_1098|Methanococcus

Query: 2 LTNGRLYLH 10
L NG +Y+H
Sbjct: 125 LQNGEIYVH 133


>sp|PURO_METAR|IMP cyclohydrolase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GLTNGRLY 8
G TNGRL+
Sbjct: 10 GKTNGRLW 17


>sp|CSG_HALVD|CELL surface glycoprotein|Haloferax volcanii (strain ATCC 29605

Query: 1 GLTNGRLYLH 10
GLT GR+ H
Sbjct: 573 GLTQGRVTAH 582


>sp|AGLB_METVO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanococcus voltae

Query: 4 NGRLYL 9
NGR+YL
Sbjct: 75 NGRMYL 80


>sp|HYD2G_PYRFU|SULFHYDROGENASE 2 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GLTNGRLYL 9
GL+ GR+Y+
Sbjct: 234 GLSPGRIYM 242


>sp|GLYA_HYPBU|SERINE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 LTNGRLYL 9
L +GRLYL
Sbjct: 429 LEDGRLYL 436


>sp|CDC6_METST|ORC1-TYPE DNA replication protein|Methanosphaera stadtmanae (strain ATCC

Query: 2 LTNGRLY 8
+T+GRLY
Sbjct: 314 ITSGRLY 320


>sp|CDC61_METTH|ORC1-TYPE DNA replication protein 1|Methanothermobacter thermautotrophicus

Query: 2 LTNGRLY 8
+T+GRLY
Sbjct: 313 ITSGRLY 319


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LTNGRLYL 9
LT G++YL
Sbjct: 88 LTTGKIYL 95


>sp|NEP1_PYRIL|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum islandicum

Query: 5 GRLYLH 10
GR+Y+H
Sbjct: 81 GRIYIH 86




185|SequenceR|930|921|KIGKDGLTNG

>sp|Y810_METJA|PROTEIN MJ0810|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KIGKDGL 7
KIG+DGL
Sbjct: 124 KIGRDGL 130


>sp|Y2425_METAR|PROTEIN UNCMA_24250|Methanocella arvoryzae (strain DSM 22066

Query: 1 KIGKDGL 7
KIG+DGL
Sbjct: 121 KIGRDGL 127


>sp|G1PDH_THESM|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus sibiricus (strain DSM 12597

Query: 2 IGKDGLT 8
+GKDGLT
Sbjct: 330 LGKDGLT 336


>sp|Y748_THEPD|PROTEIN Tpen_0748|Thermofilum pendens (strain DSM 2475

Query: 1 KIGKDGL 7
K+G+DGL
Sbjct: 134 KVGRDGL 140


>sp|Y1979_PYRFU|PROTEIN PF1979|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KIGKDGL 7
K+G+DGL
Sbjct: 128 KVGRDGL 134


>sp|Y1965_THEON|PROTEIN TON_1965|Thermococcus onnurineus (strain NA1)

Query: 1 KIGKDGL 7
K+G+DGL
Sbjct: 128 KVGRDGL 134


>sp|Y174_THEKO|PROTEIN TK0174|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KIGKDGL 7
K+G+DGL
Sbjct: 128 KVGRDGL 134


>sp|Y1450_THEGJ|PROTEIN TGAM_1450|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KIGKDGL 7
K+G+DGL
Sbjct: 128 KVGRDGL 134


>sp|Y138_META3|PROTEIN Maeo_0138|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KIGKDGL 7
K+G+DGL
Sbjct: 124 KVGRDGL 130


>sp|Y010_PYRHO|PROTEIN PH0010|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KIGKDGL 7
K+G+DGL
Sbjct: 129 KVGRDGL 135


>sp|Y010_PYRAB|PROTEIN PYRAB00100|Pyrococcus abyssi (strain GE5 /

Query: 1 KIGKDGL 7
K+G+DGL
Sbjct: 128 KVGRDGL 134


>sp|AMPD_PYRHO|ANHYDROMEVALONATE phosphate decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GKDGLT 8
GKDGLT
Sbjct: 395 GKDGLT 400


>sp|DCD_THESM|DCTP deaminase|Thermococcus sibiricus (strain DSM 12597

Query: 1 KIGKDGLTNG 10
++GK+ + NG
Sbjct: 30 RVGKEAMVNG 39


>sp|PRIL_METAC|DNA primase large subunit PriL|Methanosarcina acetivorans (strain ATCC

Query: 2 IGKDGL 7
IGKDGL
Sbjct: 311 IGKDGL 316


>sp|G1PDH_THEKO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus kodakarensis (strain ATCC

Query: 2 IGKDGLT 8
+GKDGLT
Sbjct: 331 LGKDGLT 337


>sp|Y193_SACS2|PROTEIN SSO0193|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KIGKDGL 7
K+G+DGL
Sbjct: 135 KVGEDGL 141


>sp|AATA_IGNH4|A-TYPE ATP synthase subunit A|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 KIGKDGL 7
++GKDGL
Sbjct: 30 EVGKDGL 36


>sp|Y855_SACI1|PROTEIN YN1551_0855|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 KIGKDGL 7
K+G+DGL
Sbjct: 135 KVGEDGL 141


>sp|Y2104_SACI2|PROTEIN LS215_2104|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 KIGKDGL 7
K+G+DGL
Sbjct: 135 KVGEDGL 141


>sp|Y2063_SACI7|PROTEIN YG5714_2063|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 KIGKDGL 7
K+G+DGL
Sbjct: 135 KVGEDGL 141


>sp|Y2019_SACI3|PROTEIN M1627_2019|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 KIGKDGL 7
K+G+DGL
Sbjct: 135 KVGEDGL 141


>sp|Y1949_SACI6|PROTEIN M164_1949|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KIGKDGL 7
K+G+DGL
Sbjct: 135 KVGEDGL 141


>sp|Y1941_SACI4|PROTEIN M1425_1941|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KIGKDGL 7
K+G+DGL
Sbjct: 135 KVGEDGL 141


>sp|Y229_SULTO|PROTEIN STK_02290|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KIGKDGL 7
K+G+DGL
Sbjct: 139 KVGEDGL 145


>sp|RADB_THEVO|DNA repair and recombination protein|Thermoplasma volcanium (strain

Query: 5 DGLTNG 10
DGLTNG
Sbjct: 22 DGLTNG 27


>sp|SYE_THEAC|GLUTAMATE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 GKDGLTN 9
GKD LTN
Sbjct: 294 GKDQLTN 300


>sp|G1PDH_PYRFU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IGKDGLT 8
+G+DGLT
Sbjct: 326 LGRDGLT 332


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GKDGLTN 9
GKD LTN
Sbjct: 294 GKDQLTN 300


>sp|AATA_META3|A-TYPE ATP synthase subunit A|Methanococcus aeolicus (strain ATCC

Query: 1 KIGKDGLT 8
K+G +GLT
Sbjct: 29 KVGNEGLT 36


>sp|URE2_NATPD|UREASE subunit beta|Natronomonas pharaonis (strain ATCC 35678

Query: 3 GKDGLTNG 10
G DGL NG
Sbjct: 100 GMDGLVNG 107


>sp|RS15_NITMS|SMALL ribosomal subunit protein uS15|Nitrosopumilus maritimus (strain

Query: 1 KIGKDGLT 8
K KDGLT
Sbjct: 39 KYSKDGLT 46


>sp|AROC_CALMQ|CHORISMATE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 KDGLTNG 10
KDGLT G
Sbjct: 70 KDGLTTG 76


>sp|Y1355_METJA|UNCHARACTERIZED protein MJ1355|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IGKDGLTNG 10
IGK GLT+
Sbjct: 550 IGKKGLTDA 558


>sp|NSR_PYRAB|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus abyssi (strain GE5

Query: 1 KIGKDGLT 8
+IGK GLT
Sbjct: 338 EIGKTGLT 345


>sp|NCPPR_PYRHO|NAD(P)H coenzyme A polysulfide/persulfide reductase|Pyrococcus horikoshii

Query: 1 KIGKDGLT 8
+IGK GLT
Sbjct: 337 EIGKTGLT 344


>sp|RQCH_METJA|ARCHAEAL Rqc2 homolog aRqcH|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GKDGLTN 9
GKD +TN
Sbjct: 491 GKDAITN 497




186|SequenceR|935|926|GECLLKIGKD

>sp|TRPF_METTP|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 ECLLKIGKD 10
EC LK G D
Sbjct: 16 ECALKAGAD 24


>sp|RRP41_ARCFU|EXOSOME complex component Rrp41|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GECLLKIGKD 10
G C L++GK+
Sbjct: 41 GSCYLEMGKN 50


>sp|RL3_METHJ|LARGE ribosomal subunit protein uL3|Methanospirillum hungatei JF-1

Query: 4 LLKIGKD 10
LLKIG+D
Sbjct: 268 LLKIGED 274


>sp|CAPPA_METBF|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 ECLLKIGKD 10
ECL ++ KD
Sbjct: 456 ECLKEVSKD 464


>sp|RNZ_METTH|RIBONUCLEASE Z|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 ECLLKIG 8
EC++K+G
Sbjct: 99 ECIMKMG 105


>sp|TRUD_PYRAR|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum arsenaticum (strain DSM

Query: 1 GECLLKIGKD 10
GE LLK+ K+
Sbjct: 334 GEALLKVMKE 343


>sp|PSTB_SACS2|PHOSPHATE import ATP-binding protein PstB|Saccharolobus solfataricus (strain

Query: 2 ECLLKIG 8
ECL K+G
Sbjct: 132 ECLRKVG 138


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 LLKIGKD 10
L+K+GKD
Sbjct: 1005 LIKLGKD 1011


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro

Query: 2 ECLLKIGK 9
EC L+IG+
Sbjct: 78 ECALEIGR 85


>sp|PYRDB_METJA|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanocaldococcus

Query: 1 GECLLK 6
GEC+LK
Sbjct: 2 GECMLK 7




187|SequenceR|940|931|DPHLLGECLL

>sp|MFNA_METJA|L-TYROSINE/L-ASPARTATE decarboxylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DPHLLGEC 8
DPH +G C
Sbjct: 242 DPHKMGHC 249


>sp|PYRH_METAC|URIDYLATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DPHLLGECL 9
DP LLGE L
Sbjct: 205 DPSLLGEIL 213


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PHLLGECL 9
P LLG C+
Sbjct: 210 PELLGSCV 217


>sp|APGM_PYRNV|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 DPHLLGE 7
DPH +GE
Sbjct: 167 DPHKVGE 173


>sp|MTRA_METFA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanocaldococcus fervens (strain

Query: 3 HLLGECL 9
HL G+CL
Sbjct: 85 HLTGQCL 91


>sp|TRPE_METTM|ANTHRANILATE synthase component 1|Methanothermobacter marburgensis (strain ATCC

Query: 3 HLLGEC 8
HL GEC
Sbjct: 146 HLTGEC 151


>sp|TRPE_METTH|ANTHRANILATE synthase component 1|Methanothermobacter thermautotrophicus (strain

Query: 3 HLLGEC 8
HL GEC
Sbjct: 144 HLTGEC 149


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 PHLLGECL 9
P LLG C+
Sbjct: 203 PELLGACV 210


>sp|CSM3_METJA|CRISPR system Cms endoribonuclease Csm3|Methanocaldococcus jannaschii

Query: 2 PHLLGEC 8
PH GEC
Sbjct: 80 PHDCGEC 86


>sp|TRUD_PYRNV|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum neutrophilum (strain DSM

Query: 3 HLLGECLL 10
HLLG+ LL
Sbjct: 185 HLLGKALL 192


>sp|TRUD_PYRAE|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum aerophilum (strain ATCC

Query: 3 HLLGECLL 10
HLLG+ LL
Sbjct: 185 HLLGKALL 192




188|SequenceR|945|936|VQLKCDPHLL

>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 3 LKCDPHLL 10
LKCDP L
Sbjct: 182 LKCDPEAL 189


>sp|PANB_NATPD|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VQLKCDPH 8
V+L+C PH
Sbjct: 109 VKLECGPH 116


>sp|FURH_ARCFU|FERRIC uptake regulation protein homolog|Archaeoglobus fulgidus (strain

Query: 1 VQLKCDPHL 9
V++ C+PH
Sbjct: 81 VEVNCEPHF 89


>sp|EF2_THEGJ|ELONGATION factor 2|Thermococcus gammatolerans (strain DSM 15229

Query: 3 LKCDP 7
LKCDP
Sbjct: 284 LKCDP 288


>sp|MTD_METVS|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 1 VQLKCDP 7
V +KCDP
Sbjct: 112 VLIKCDP 118


>sp|MTD_METMP|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 1 VQLKCDP 7
V +KCDP
Sbjct: 113 VLIKCDP 119


>sp|MTD_METM7|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 1 VQLKCDP 7
V +KCDP
Sbjct: 113 VLIKCDP 119


>sp|MTD_METM5|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 1 VQLKCDP 7
V +KCDP
Sbjct: 113 VLIKCDP 119


>sp|ADEC_METS3|ADENINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 5 CDPH 8
CDPH
Sbjct: 82 CDPH 85


>sp|ACD2_ARCFU|ACETATE--COA ligase [ADP-forming] II|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VQLKCDPHLL 10
++LKC P +L
Sbjct: 267 LELKCYPSIL 276


>sp|MTD_META3|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 1 VQLKCDP 7
+ +KCDP
Sbjct: 113 ILIKCDP 119




189|SequenceR|950|941|NDLELVQLKC

>sp|TIAS_SACI2|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Saccharolobus islandicus

Query: 1 NDLELVQLKC 10
NDL+L+ KC
Sbjct: 346 NDLQLINPKC 355


>sp|PROA_METAC|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NDLELVQLKC 10
NDL L Q+ C
Sbjct: 108 NDLILYQISC 117


>sp|Y1516_METJA|UNCHARACTERIZED protein MJ1516|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NDLELVQLK 9
N++EL+Q+K
Sbjct: 5 NEIELMQIK 13


>sp|HERA_SULTO|DNA double-strand break repair helicase|Sulfurisphaera tokodaii

Query: 1 NDLELVQ 7
ND+ELVQ
Sbjct: 57 NDIELVQ 63


>sp|HERA_SACS2|DNA double-strand break repair helicase|Saccharolobus solfataricus

Query: 1 NDLELVQ 7
ND+E+VQ
Sbjct: 57 NDIEIVQ 63




190|SequenceR|955|946|STLNCNDLEL

>sp|CAS4_PYRCJ|CRISPR-ASSOCIATED exonuclease Cas4|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 STLNCNDLE 9
S +NC DLE
Sbjct: 11 SVVNCEDLE 19


>sp|GYRA_HALL2|DNA gyrase subunit A|Haloferax lucentense (strain DSM 14919

Query: 1 STLNCNDLE 9
+ +NC+DLE
Sbjct: 617 AVVNCDDLE 625


>sp|AAT_SULAC|ASPARTATE aminotransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 TLNCNDLE 9
+LN NDLE
Sbjct: 156 SLNLNDLE 163


>sp|RNH2_METJA|RIBONUCLEASE HII|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 STLNCNDLEL 10
+++N ND+E+
Sbjct: 77 NSINLNDIEI 86




191|SequenceR|960|951|DWCCHSTLNC

>sp|HDRD_METBF|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina barkeri (strain

Query: 1 DWCCHSTL 8
+WCC S L
Sbjct: 202 EWCCGSAL 209


>sp|FRHA_METBF|COENZYME F420 hydrogenase subunit alpha|Methanosarcina barkeri (strain

Query: 3 CCHSTLNC 10
CC++ L C
Sbjct: 342 CCYTILRC 349


>sp|HDRD_METAC|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina acetivorans

Query: 1 DWCCHSTL 8
+WCC S L
Sbjct: 202 EWCCGSAL 209


>sp|HDRD_METTT|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina thermophila

Query: 1 DWCCHSTL 8
+WCC S L
Sbjct: 202 EWCCGSAL 209


>sp|HDRD_METMA|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina mazei (strain

Query: 1 DWCCHSTL 8
+WCC S L
Sbjct: 202 EWCCGSAL 209


>sp|Y828_METBU|UPF0210 protein Mbur_0828|Methanococcoides burtonii (strain DSM 6242

Query: 3 CCHSTLN 9
CCHS ++
Sbjct: 34 CCHSDID 40


>sp|BIOA_METJA|ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DWCCHSTL 8
D CHSTL
Sbjct: 78 DKICHSTL 85


>sp|GLCD3_SACS2|GLUCOSE 1-dehydrogenase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 WCCHSTLNC 10
WC + NC
Sbjct: 176 WCKDGSYNC 184


>sp|CYAS_METAR|CYSTEATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 5 HSTLNC 10
H TLNC
Sbjct: 18 HYTLNC 23




192|SequenceR|965|956|LLTSLDWCCH

>sp|Y834_METJA|UNCHARACTERIZED protein MJ0834|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLTSLDWCCH 10
L+T LDW H
Sbjct: 215 LITQLDWWNH 224


>sp|Y115_METJA|UNCHARACTERIZED protein MJ0115|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 SLDWCC 9
SL WCC
Sbjct: 68 SLVWCC 73


>sp|HIS7_CENSY|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Cenarchaeum symbiosum (strain A)

Query: 1 LLTSLDWCCH 10
LL +LD C H
Sbjct: 140 LLRNLDCCIH 149


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LTSLDWCCH 10
LTS + CH
Sbjct: 142 LTSFEMLCH 150


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LTSLDWCCH 10
LTS + CH
Sbjct: 142 LTSFEMLCH 150


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 LTSLDWCCH 10
LTS + CH
Sbjct: 139 LTSFEMLCH 147




193|SequenceR|970|961|SQSSTLLTSL

***** No hits found ******


194|SequenceR|975|966|SLKRLSQSST

***** No hits found ******


195|SequenceR|980|971|DNNGLSLKRL

>sp|ENO_SACI1|ENOLASE islandicus (strain Y.N.15.51 /

Query: 1 DNNGLSLKR 9
D NGL++KR
Sbjct: 56 DENGLTVKR 64


>sp|ENO_SACI2|ENOLASE islandicus (strain L.S.2.15 /

Query: 1 DNNGLSLKR 9
D NGL++KR
Sbjct: 56 DENGLTVKR 64


>sp|ENO_SACI7|ENOLASE islandicus (strain Y.G.57.14 /

Query: 1 DNNGLSLKR 9
D NGL++KR
Sbjct: 56 DENGLTVKR 64


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 NNGLSLKRL 10
+NGL++KRL
Sbjct: 714 SNGLAIKRL 722


>sp|ENO_SACI6|ENOLASE islandicus (strain M.16.4 /

Query: 1 DNNGLSLKR 9
D NGL++KR
Sbjct: 56 DENGLTVKR 64


>sp|ENO_SACI4|ENOLASE islandicus (strain M.14.25 /

Query: 1 DNNGLSLKR 9
D NGL++KR
Sbjct: 56 DENGLTVKR 64


>sp|ENO_SACI3|ENOLASE islandicus (strain M.16.27) (Sulfolobus

Query: 1 DNNGLSLKR 9
D NGL++KR
Sbjct: 56 DENGLTVKR 64


>sp|ENO_SACS2|ENOLASE solfataricus (strain ATCC 35092

Query: 1 DNNGLSLKR 9
D NGL++KR
Sbjct: 56 DENGLTVKR 64


>sp|METXA_METLZ|HOMOSERINE O-acetyltransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 NNGLSLKRL 10
N+GLSL R+
Sbjct: 212 NHGLSLARM 220


>sp|KPYK_THEAC|PYRUVATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 NNGLSLKRL 10
+NGLSL R+
Sbjct: 24 DNGLSLVRI 32




196|SequenceR|985|976|GLDGLDNNGL

>sp|PURP_META3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus aeolicus (strain ATCC

Query: 1 GLDGLDNN 8
GLD L+NN
Sbjct: 100 GLDNLENN 107


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LDGLDNNG 9
+DG DN G
Sbjct: 284 MDGFDNRG 291


>sp|ENO1_METHJ|ENOLASE 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LDGLDNNG 9
LDG DN G
Sbjct: 96 LDGTDNKG 103


>sp|RADB_THEVO|DNA repair and recombination protein|Thermoplasma volcanium (strain

Query: 2 LDGLDNNGL 10
+DGL N GL
Sbjct: 21 IDGLTNGGL 29


>sp|Y79A_METJA|UNCHARACTERIZED protein MJ0792.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DGLDNNGL 10
D L+NNGL
Sbjct: 83 DILENNGL 90


>sp|CPS_METS3|CARBAMOYL-PHOSPHATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LDGLDNN 8
++GLDNN
Sbjct: 225 VEGLDNN 231


>sp|SYH_PYRFU|HISTIDINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GLDNNGL 10
GLD NG+
Sbjct: 202 GLDKNGI 208


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC

Query: 1 GLDGLDN 7
G+DG DN
Sbjct: 40 GIDGFDN 46


>sp|SYH_PYRAB|HISTIDINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 GLDNNGL 10
GLD NG+
Sbjct: 202 GLDENGI 208


>sp|IDI2_PYRHO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GLDGLDNNGL 10
G+D +D +GL
Sbjct: 217 GIDAIDISGL 226


>sp|COBD_METTH|PROBABLE cobalamin biosynthesis protein CobD|Methanothermobacter

Query: 3 DGLDNNGL 10
DGLDN L
Sbjct: 264 DGLDNEKL 271


>sp|GLNA_HALSA|GLUTAMINE synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GLDGLDNNG 9
GLDG+D +
Sbjct: 364 GLDGIDTDA 372




197|SequenceR|990|981|CFMMVGLDGL

>sp|GLNA_THEKO|GLUTAMINE synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 MMVGLDGL 10
+MVGLDG+
Sbjct: 340 LMVGLDGI 347


>sp|GLNA_METJA|GLUTAMINE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CFMMVGLDGL 10
C + GLDG+
Sbjct: 360 CMLAAGLDGI 369


>sp|SYY_METBU|TYROSINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 CFMMVGLD 8
CF+ +GLD
Sbjct: 93 CFLALGLD 100


>sp|SYY_METKA|TYROSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 CFMMVGLD 8
CF+ +GLD
Sbjct: 96 CFLAMGLD 103


>sp|SYY_METMA|TYROSINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CFMMVGLD 8
CF+ +GLD
Sbjct: 93 CFIALGLD 100


>sp|SYY_METBF|TYROSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 CFMMVGLD 8
CF+ +GLD
Sbjct: 93 CFIALGLD 100


>sp|SYY_METAC|TYROSINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 CFMMVGLD 8
CF+ +GLD
Sbjct: 93 CFIALGLD 100


>sp|ASPD_METBU|L-ASPARTATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 4 MVGLDGL 10
+VGLDGL
Sbjct: 125 IVGLDGL 131


>sp|GLNA_SULAC|GLUTAMINE synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 MMVGLDGL 10
+M GLDG+
Sbjct: 380 LMAGLDGI 387


>sp|GLNA_PYRHO|GLUTAMINE synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 MMVGLDGL 10
+M GLDG+
Sbjct: 340 LMAGLDGI 347


>sp|GLNA_PYRAB|GLUTAMINE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 3 MMVGLDGL 10
+M GLDG+
Sbjct: 336 LMAGLDGI 343


>sp|TIAS_METLZ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocorpusculum labreanum

Query: 2 FMMVGLD 8
FM++GLD
Sbjct: 9 FMLLGLD 15


>sp|NIKR2_METMA|PUTATIVE nickel-responsive regulator 2|Methanosarcina mazei (strain ATCC

Query: 1 CFMMVGLDG 9
CF +V LDG
Sbjct: 100 CFEVVVLDG 108


>sp|ASPD_METTH|L-ASPARTATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 MVGLDGL 10
+VGLDGL
Sbjct: 125 IVGLDGL 131


>sp|PROA_HALWD|GAMMA-GLUTAMYL phosphate reductase|Haloquadratum walsbyi (strain DSM 16790

Query: 5 VGLDGL 10
VGLDGL
Sbjct: 410 VGLDGL 415


>sp|SYY_METS3|TYROSINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 CFMMVGLD 8
CF +GLD
Sbjct: 95 CFKALGLD 102


>sp|NIKR3_METAC|PUTATIVE nickel-responsive regulator 3|Methanosarcina acetivorans (strain

Query: 1 CFMMVGLDG 9
CF ++ LDG
Sbjct: 100 CFEVIVLDG 108




198|SequenceR|995|986|QKLVECFMMV

>sp|MTBA_METMA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QKLVEC 6
QK+VEC
Sbjct: 328 QKMVEC 333


>sp|MTBA_METAC|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina acetivorans (strain ATCC

Query: 1 QKLVEC 6
QK+VEC
Sbjct: 328 QKMVEC 333




199|SequenceR|1000|991|LLCSQQKLVE

>sp|THRC_METAC|THREONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LCSQQKL 8
LCSQ+K+
Sbjct: 187 LCSQEKI 193




200|SequenceR|1005|996|LGLNQLLCSQ

>sp|BIOA_METJA|ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NQLLCS 9
NQLLCS
Sbjct: 337 NQLLCS 342


>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 1 LGLNQLLCS 9
LGL QL+C+
Sbjct: 515 LGLIQLICT 523


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 3 LNQLLCSQ 10
+NQLLC++
Sbjct: 610 INQLLCTR 617


>sp|Y1674_METJA|CRISPR-ASSOCIATED protein MJ1674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LNQLLCSQ 10
LNQ LCS+
Sbjct: 562 LNQNLCSK 569




201|SequenceR|1010|1001|FYMESLGLNQ

>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 YMESLGLNQ 10
YM LGLN+
Sbjct: 354 YMNELGLNE 362


>sp|TRUA_PYRFU|TRNA pseudouridine synthase A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FYMESLGLN 9
+Y+ SLG+N
Sbjct: 108 YYLPSLGMN 116


>sp|EF1A_CENSY|ELONGATION factor 1-alpha|Cenarchaeum symbiosum (strain A)

Query: 1 FYMESLGLNQ 10
F +++LG+NQ
Sbjct: 142 FLLKTLGVNQ 151


>sp|HOSA_PYRHO|HOMOCITRATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FYMESLGLN 9
+Y++ LG+N
Sbjct: 320 YYLQKLGIN 328


>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 2 YMESLGLN 9
YME GLN
Sbjct: 257 YMEDKGLN 264


>sp|TMG10_PYRAB|TRNA (guanine(10)-N2)-dimethyltransferase|Pyrococcus abyssi (strain

Query: 1 FYMESLGL 8
FY+E LGL
Sbjct: 2 FYVEILGL 9


>sp|QUEC_THEVO|7-CYANO-7-DEAZAGUANINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 YMESLGLNQ 10
Y ESLG N+
Sbjct: 110 YAESLGTNE 118


>sp|Y378_NANEQ|UPF0173 metal-dependent hydrolase NEQ378|Nanoarchaeum equitans (strain

Query: 1 FYMESLGLN 9
F +ES+G+N
Sbjct: 71 FNIESIGMN 79


>sp|COFC_METRM|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanobrevibacter ruminantium (strain ATCC

Query: 2 YMESLGL 8
Y+ESLG+
Sbjct: 212 YLESLGI 218


>sp|GLNA_ARCFU|GLUTAMINE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FYMESLGLN 9
+Y+E LG++
Sbjct: 215 YYLEQLGID 223


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 ESLGLNQ 10
ESLGLN+
Sbjct: 1355 ESLGLNK 1361




202|SequenceR|1015|1006|KTEYNFYMES

>sp|VORB_METTM|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter marburgensis

Query: 3 EYNFYME 9
E+NFY++
Sbjct: 219 EFNFYLQ 225


>sp|PORA_METTM|PYRUVATE synthase subunit PorA|Methanothermobacter marburgensis (strain ATCC

Query: 2 TEYNFYMES 10
T+ N+YME+
Sbjct: 211 TDPNYYMEA 219


>sp|VORB_METTH|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter thermautotrophicus

Query: 3 EYNFYME 9
E+NFY++
Sbjct: 219 EFNFYLQ 225


>sp|Y345_METJA|UNCHARACTERIZED protein MJ0345|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KTEYNFYMES 10
+TEY+F +ES
Sbjct: 215 ETEYSFLVES 224


>sp|MRE11_NANEQ|DNA double-strand break repair protein|Nanoarchaeum equitans (strain

Query: 1 KTEYNFYME 9
K +Y+F+ME
Sbjct: 330 KEDYDFFME 338


>sp|YPZ5_METTF|UNCHARACTERIZED protein ORF5'|Methanothermobacter thermautotrophicus

Query: 1 KTEYNFYMES 10
+ YNFY+++
Sbjct: 412 RKTYNFYLKN 421


>sp|KTHY1_SACS2|PROBABLE thymidylate kinase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 EYNFYM 8
EYNFY+
Sbjct: 161 EYNFYV 166


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TEYNFYMES 10
T YNFY S
Sbjct: 386 TRYNFYPSS 394




203|SequenceR|1020|1011|TELASKTEYN

>sp|LEUC_METMA|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina mazei

Query: 4 ASKTEY 9
ASKTEY
Sbjct: 332 ASKTEY 337


>sp|LEUC_METAC|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina

Query: 4 ASKTEY 9
ASKTEY
Sbjct: 332 ASKTEY 337




204|SequenceR|1025|1016|KEEQLTELAS

>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 2 EEQLTEL 8
EEQLT+L
Sbjct: 172 EEQLTQL 178


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 2 EEQLTEL 8
EEQLT+L
Sbjct: 172 EEQLTQL 178


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 EEQLTEL 8
EEQLT+L
Sbjct: 172 EEQLTQL 178


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 EEQLTEL 8
EEQLT+L
Sbjct: 172 EEQLTQL 178




205|SequenceR|1030|1021|VTLEPKEEQL

>sp|ALF1_THEKO|FRUCTOSE-BISPHOSPHATE aldolase class 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LEPKEEQL 10
L PKEEQL
Sbjct: 93 LRPKEEQL 100


>sp|AROE_NATPD|SHIKIMATE dehydrogenase (NADP(+))|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VTLEPKEEQL 10
VT EP EQL
Sbjct: 34 VTFEPASEQL 43


>sp|RNZ_NANEQ|RIBONUCLEASE Z|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 VTLEPKE 7
+TL+PKE
Sbjct: 182 ITLDPKE 188


>sp|Y971_METJA|UNCHARACTERIZED protein MJ0971|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TLEPKEE 8
T+EPK+E
Sbjct: 240 TIEPKKE 246




206|SequenceR|1036|1026|WSPEFVVTLEP

>sp|Y727_METTH|UPF0280 protein MTH_727|Methanothermobacter thermautotrophicus (strain

Query: 2 SPEFVVTLEP 11
+PEF+ +LEP
Sbjct: 57 NPEFLTSLEP 66


>sp|NPPNK_METMP|BIFUNCTIONAL NADP phosphatase/NAD kinase|Methanococcus maripaludis (strain DSM

Query: 3 PEFVVTLEP 11
PE+V+ L+P
Sbjct: 78 PEYVIVLDP 86


>sp|Y309_METBU|UPF0280 protein Mbur_0309|Methanococcoides burtonii (strain DSM 6242

Query: 3 PEFVVTLEP 11
P F VTLEP
Sbjct: 44 PYFKVTLEP 52


>sp|ARGD_METKA|ACETYLORNITHINE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 WSPEFVVTLEP 11
W PEF EP
Sbjct: 143 WKPEFREPFEP 153


>sp|MTD_METMA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina

Query: 1 WSPEFVVTLEP 11
W+ +FVV + P
Sbjct: 59 WNADFVVIISP 69


>sp|CCA_METKA|CCA-ADDING enzyme|Methanopyrus kandleri (strain AV19 /

Query: 1 WSPEFVVTLE 10
W P FV+ LE
Sbjct: 208 WRPGFVIDLE 217


>sp|MTD_METAC|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina

Query: 1 WSPEFVVTLEP 11
W+ +FVV + P
Sbjct: 59 WNADFVVMISP 69


>sp|BTUFA_HALSA|COBALAMIN-BINDING protein|Halobacterium salinarum (strain ATCC 700922

Query: 3 PEFVVTLEP 11
PE VVTL P
Sbjct: 60 PERVVTLNP 68


>sp|BTUFA_HALS3|COBALAMIN-BINDING protein|Halobacterium salinarum (strain ATCC 29341

Query: 3 PEFVVTLEP 11
PE VVTL P
Sbjct: 60 PERVVTLNP 68


>sp|RS4_ARCFU|SMALL ribosomal subunit protein uS4|Archaeoglobus fulgidus (strain ATCC

Query: 2 SPEFVVTLE 10
SP F+VT E
Sbjct: 145 SPSFIVTKE 153


>sp|Y2648_METMA|UPF0280 protein MM_2648|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PEFVVTLEP 11
P F +TLEP
Sbjct: 63 PYFQITLEP 71


>sp|Y3551_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 3 PEFVVTLEP 11
PE V TL+P
Sbjct: 266 PELVNTLKP 274


>sp|KAD_PYRAB|ADENYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 SPEFVVTLE 10
+PE V+TLE
Sbjct: 87 TPEQVITLE 95


>sp|Y3697_METBF|UPF0280 protein Mbar_A3697|Methanosarcina barkeri (strain Fusaro /

Query: 3 PEFVVTLEP 11
P F +TLEP
Sbjct: 60 PYFQLTLEP 68


>sp|DADD_METTP|5'-DEOXYADENOSINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 PEFVVTLEP 11
PEF+ +EP
Sbjct: 145 PEFINDVEP 153


>sp|Y2784_METAR|UPF0179 protein UNCMA_27840|Methanocella arvoryzae (strain DSM 22066

Query: 3 PEFVVTL 9
P+FV+TL
Sbjct: 4 PDFVITL 10


>sp|Y1084_METPE|UPF0212 protein Mpal_1084|Methanosphaerula palustris (strain ATCC

Query: 3 PEFVVTLE 10
P+++VTLE
Sbjct: 2 PDYMVTLE 9


>sp|MTRB_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanothermobacter marburgensis

Query: 2 SPEFVVTLEP 11
+PE+ +TL+P
Sbjct: 10 APEYNLTLDP 19


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PEFVVTLEP 11
P F+V LEP
Sbjct: 88 PYFLVDLEP 96


>sp|MTRB_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanothermobacter

Query: 2 SPEFVVTLEP 11
+PE+ +TL+P
Sbjct: 10 APEYNLTLDP 19


>sp|PYRG_NATPD|CTP synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 SPEFVVTLE 10
+PE++ TLE
Sbjct: 475 NPEYIETLE 483


>sp|TRPE_HALVD|ANTHRANILATE synthase component 1|Haloferax volcanii (strain ATCC 29605

Query: 1 WSPEFVVTLEP 11
+ PE VVT+ P
Sbjct: 86 YDPEAVVTVGP 96


>sp|Y394_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 3 PEFVVTLEP 11
PE V TL+P
Sbjct: 269 PEIVDTLKP 277


>sp|TKTC_METJA|PUTATIVE transketolase C-terminal section|Methanocaldococcus jannaschii

Query: 2 SPEFVVTLE 10
S +FVVT+E
Sbjct: 243 SKDFVVTVE 251


>sp|Y1659_METB6|UPF0212 protein Mboo_1659|Methanoregula boonei (strain DSM 21154

Query: 3 PEFVVTLE 10
P+++VTLE
Sbjct: 2 PDYLVTLE 9


>sp|Y1519_METMJ|UPF0280 protein Memar_1519|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PEFVVTLEP 11
P F TLEP
Sbjct: 45 PYFSATLEP 53


>sp|Y858_METMJ|UPF0212 protein Memar_0858|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PEFVVTLE 10
P+++VTLE
Sbjct: 2 PDYLVTLE 9


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 WSPEFVVT 8
W P FV+T
Sbjct: 399 WHPFFVLT 406




THE END