1|Sequence|1|10|MAEAVAAPIS
***** No hits found ******
2|Sequence|6|15|AAPISPWTMA
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 4 ISPWTMA 10
IS WTMA
Sbjct: 213 ISNWTMA 219
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 4 ISPWTMA 10
IS WTMA
Sbjct: 213 ISNWTMA 219
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 ISPWTM 9
ISPWT+
Sbjct: 146 ISPWTL 151
>sp|Y206_ADE07|UNCHARACTERIZED 20.6 kDa early protein|Human adenovirus B serotype 7
Query: 2 APISPWT 8
PI PW+
Sbjct: 8 GPILPWS 14
>sp|GAG_HV19N|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 ISPWTM 9
ISPWT+
Sbjct: 146 ISPWTL 151
>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain
Query: 2 APISPWT 8
AP+ PW+
Sbjct: 132 APLLPWS 138
>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains
Query: 2 APISPWT 8
AP+ PW+
Sbjct: 132 APLLPWS 138
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 6 PWTMA 10
PWTMA
Sbjct: 598 PWTMA 602
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 ISPWT 8
I PWT
Sbjct: 1225 IQPWT 1229
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 ISPWT 8
I PWT
Sbjct: 1225 IQPWT 1229
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 4 ISPWTM 9
+SPW M
Sbjct: 45 LSPWFM 50
>sp|PG125_VAR67|SCAFFOLD protein OPG125|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 PISPWT 8
P+S WT
Sbjct: 396 PVSLWT 401
>sp|PG125_VACCT|SCAFFOLD protein OPG125|Vaccinia virus (strain Tian Tan)
Query: 3 PISPWT 8
P+S WT
Sbjct: 396 PVSLWT 401
>sp|PG125_VACCC|SCAFFOLD protein OPG125|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PISPWT 8
P+S WT
Sbjct: 396 PVSLWT 401
>sp|PG125_VACCA|SCAFFOLD protein OPG125|Vaccinia virus (strain Ankara) (VACV)
Query: 3 PISPWT 8
P+S WT
Sbjct: 396 PVSLWT 401
>sp|PG125_MONPV|SCAFFOLD protein OPG125|Monkeypox virus (MPXV)
Query: 3 PISPWT 8
P+S WT
Sbjct: 396 PVSLWT 401
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 4 ISPWTMA 10
+SPW MA
Sbjct: 1274 MSPWAMA 1280
>sp|D13_VARV|SCAFFOLD protein D13|Variola virus
Query: 3 PISPWT 8
P+S WT
Sbjct: 396 PVSLWT 401
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related
Query: 4 ISPWTM 9
+SPW M
Sbjct: 45 LSPWFM 50
>sp|VE2_HPV09|REGULATORY protein E2|Human papillomavirus 9
Query: 6 PWTMA 10
PWT+A
Sbjct: 91 PWTLA 95
3|Sequence|11|20|PWTMAATIQA
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 PWTMAATIQ 9
PWT TIQ
Sbjct: 18 PWTQRPTIQ 26
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 PWTMAATIQ 9
PWT TIQ
Sbjct: 18 PWTQRPTIQ 26
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 PWTMAATIQ 9
PWT TIQ
Sbjct: 18 PWTQRPTIQ 26
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 WTMAATIQ 9
W +AATI+
Sbjct: 732 WVLAATIE 739
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 1 PWTMAATIQ 9
PWT TIQ
Sbjct: 18 PWTPRPTIQ 26
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 PWTMAATIQ 9
PWT TIQ
Sbjct: 18 PWTPRPTIQ 26
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 PWTMAATIQ 9
PWT TIQ
Sbjct: 18 PWTPRPTIQ 26
4|Sequence|16|25|ATIQAMERKI
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 1 ATIQAMERK 9
AT+QA++RK
Sbjct: 78 ATVQALKRK 86
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 1 ATIQAMERK 9
AT+QA++RK
Sbjct: 78 ATVQALKRK 86
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 1 ATIQAMERK 9
AT+QA++RK
Sbjct: 78 ATVQALKRK 86
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 1 ATIQAMERK 9
AT+QA++RK
Sbjct: 82 ATVQALKRK 90
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 1 ATIQAMERK 9
AT+QA++RK
Sbjct: 82 ATVQALKRK 90
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 3 IQAMERKI 10
I AME+KI
Sbjct: 71 ITAMEKKI 78
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 1 ATIQAMERK 9
AT+Q ++RK
Sbjct: 77 ATVQDLKRK 85
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 1 ATIQAMERK 9
AT+Q ++RK
Sbjct: 77 ATVQDLKRK 85
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 3 IQAMERKI 10
+ A+ERKI
Sbjct: 1214 VSALERKI 1221
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 1 ATIQAMERK 9
AT+Q ++RK
Sbjct: 77 ATVQDLKRK 85
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 3 IQAMERKI 10
+QA++RK+
Sbjct: 79 VQALKRKL 86
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 3 IQAMERKI 10
+QA++RK+
Sbjct: 79 VQALKRKL 86
5|Sequence|21|30|MERKIESQAA
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MERKIESQ 8
+++KIESQ
Sbjct: 1731 IDKKIESQ 1738
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MERKIESQ 8
+++KIESQ
Sbjct: 1731 IDKKIESQ 1738
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MERKIESQ 8
+++KIESQ
Sbjct: 1731 IDKKIESQ 1738
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MERKIESQ 8
+++KIESQ
Sbjct: 1565 IDKKIESQ 1572
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MERKIESQ 8
+++KIESQ
Sbjct: 1731 IDKKIESQ 1738
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MERKIESQ 8
+++KIESQ
Sbjct: 1731 IDKKIESQ 1738
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MERKIESQ 8
+++KIESQ
Sbjct: 1731 IDKKIESQ 1738
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MERKIESQ 8
+++KIESQ
Sbjct: 1729 IDKKIESQ 1736
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 MERKIESQA 9
M+RK+E A
Sbjct: 3997 MQRKLEKMA 4005
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 MERKIESQA 9
M+RK+E A
Sbjct: 3974 MQRKLEKMA 3982
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 MERKIESQA 9
M+RK+E A
Sbjct: 3997 MQRKLEKMA 4005
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 MERKIESQA 9
M+RK+E A
Sbjct: 3974 MQRKLEKMA 3982
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 3 RKIESQA 9
RK+ESQ
Sbjct: 907 RKVESQG 913
6|Sequence|26|35|ESQAARLLSL
***** No hits found ******
7|Sequence|31|40|RLLSLEGRTG
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 SLEGRTG 10
SL+GRTG
Sbjct: 868 SLDGRTG 874
>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)
Query: 3 LSLEGRT 9
+SLEG+T
Sbjct: 289 ISLEGKT 295
>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus
Query: 3 LSLEGRT 9
+SLEG+T
Sbjct: 284 ISLEGKT 290
>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 LSLEGRT 9
+SLEG+T
Sbjct: 284 ISLEGKT 290
>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 LSLEGRT 9
+SLEG+T
Sbjct: 284 ISLEGKT 290
>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 LSLEGRT 9
+SLEG+T
Sbjct: 284 ISLEGKT 290
>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)
Query: 3 LSLEGRT 9
+SLEG+T
Sbjct: 284 ISLEGKT 290
>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)
Query: 3 LSLEGRT 9
+SLEG+T
Sbjct: 284 ISLEGKT 290
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 SLEGRTG 10
SL+G+TG
Sbjct: 868 SLDGQTG 874
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 SLEGRTG 10
SL+G+TG
Sbjct: 867 SLDGQTG 873
8|Sequence|36|45|EGRTGMAEKK
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 2 GRTGMA 7
GRTG+A
Sbjct: 434 GRTGLA 439
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 RTGMAEK 9
+TGMA+K
Sbjct: 407 QTGMAQK 413
>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)
Query: 1 EGRTGMAEKK 10
EG+T EK+
Sbjct: 292 EGKTNFFEKR 301
>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus
Query: 1 EGRTGMAEKK 10
EG+T EK+
Sbjct: 287 EGKTNFFEKR 296
>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 EGRTGMAEKK 10
EG+T EK+
Sbjct: 287 EGKTNFFEKR 296
>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 EGRTGMAEKK 10
EG+T EK+
Sbjct: 287 EGKTNFFEKR 296
>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 EGRTGMAEKK 10
EG+T EK+
Sbjct: 287 EGKTNFFEKR 296
>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)
Query: 1 EGRTGMAEKK 10
EG+T EK+
Sbjct: 287 EGKTNFFEKR 296
>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)
Query: 1 EGRTGMAEKK 10
EG+T EK+
Sbjct: 287 EGKTNFFEKR 296
>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18
Query: 2 GRTGMAEKK 10
G G+AEK+
Sbjct: 250 GHCGLAEKQ 258
9|Sequence|41|50|MAEKKLADCE
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 4 KKLADC 9
KKL+DC
Sbjct: 445 KKLSDC 450
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 5 KLADC 9
KLADC
Sbjct: 239 KLADC 243
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 5 KLADC 9
KLADC
Sbjct: 239 KLADC 243
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 5 KLADC 9
KLADC
Sbjct: 239 KLADC 243
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 5 KLADC 9
KLADC
Sbjct: 239 KLADC 243
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 5 KLADC 9
KLADC
Sbjct: 239 KLADC 243
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 5 KLADC 9
KLADC
Sbjct: 239 KLADC 243
>sp|NEF_HV2SB|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 EKKLADCE 10
E+KL CE
Sbjct: 49 EQKLPSCE 56
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 MAEKKLAD 8
+AEK LAD
Sbjct: 577 LAEKLLAD 584
>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 AEKKLADC 9
A+K + DC
Sbjct: 558 AQKTITDC 565
10|Sequence|46|55|LADCEKTAVE
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 DCEKT 7
DCEKT
Sbjct: 284 DCEKT 288
>sp|ORF10_HHV8P|PROTEIN ORF10|Human herpesvirus 8 type P
Query: 3 DCEKT 7
DCEKT
Sbjct: 280 DCEKT 284
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 LADCEKTAV 9
+A CE TAV
Sbjct: 1305 VAACETTAV 1313
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 LADCEKTAV 9
+A CE TAV
Sbjct: 1305 VAACETTAV 1313
>sp|TEG7_HCMVM|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 DCEKTA 8
DCEK+A
Sbjct: 162 DCEKSA 167
>sp|TEG7_HCMVA|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 DCEKTA 8
DCEK+A
Sbjct: 162 DCEKSA 167
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 LADCEKTAV 9
+ADC++ AV
Sbjct: 1358 IADCQEEAV 1366
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 LADCEKTAV 9
+ADC++ AV
Sbjct: 1358 IADCQEEAV 1366
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 LADCEKTAVE 10
L+D E TAV+
Sbjct: 111 LSDHEATAVD 120
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 3 DCEKTA 8
+CE+TA
Sbjct: 372 ECERTA 377
>sp|PG091_VACCC|PROTEIN OPG091|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LADCEKTA 8
+ADC K A
Sbjct: 113 VADCYKNA 120
11|Sequence|51|60|KTAVEFGNQL
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 KTAVEFGN 8
+TAV+FGN
Sbjct: 470 QTAVDFGN 477
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 KTAVEFGN 8
+TAV+FGN
Sbjct: 470 QTAVDFGN 477
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 KTAVEFGN 8
+TAV+FGN
Sbjct: 470 QTAVDFGN 477
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 KTAVEFGN 8
+TAV+FGN
Sbjct: 470 QTAVDFGN 477
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 KTAVEFGN 8
+TAV+FGN
Sbjct: 470 QTAVDFGN 477
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 KTAVEFGN 8
+TAV+FGN
Sbjct: 470 QTAVDFGN 477
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 KTAVEFGN 8
+TAV+FGN
Sbjct: 470 QTAVDFGN 477
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 KTAVEFGN 8
+TAV+FGN
Sbjct: 470 QTAVDFGN 477
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 KTAVEFGN 8
+TAV+FGN
Sbjct: 470 QTAVDFGN 477
>sp|NCAP_SFSV|NUCLEOPROTEIN fever sicilian virus (SFS)
Query: 1 KTAVEFGNQ 9
K AVEFG Q
Sbjct: 6 KIAVEFGEQ 14
>sp|NCAP_SFTSV|NUCLEOPROTEIN phlebovirus (isolate SFTSV/Human/China/HB29/2010) (Severe
Query: 1 KTAVEFGNQ 9
+ AVEFG Q
Sbjct: 6 RIAVEFGEQ 14
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 KTAVEFGN 8
+TAV+F N
Sbjct: 470 QTAVDFSN 477
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 4 VEFGNQL 10
V FGNQ+
Sbjct: 133 VHFGNQV 139
>sp|UL92_HHV7J|PROTEIN U63|Human herpesvirus 7 (strain JI)
Query: 1 KTAVEFGNQL 10
K +E+GN L
Sbjct: 200 KMRIEYGNAL 209
12|Sequence|56|65|FGNQLEGKWA
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QLEGKW 9
QLEGKW
Sbjct: 535 QLEGKW 540
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QLEGKW 9
QLEGKW
Sbjct: 524 QLEGKW 529
>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)
Query: 3 NQLEGKWA 10
N +EG WA
Sbjct: 114 NDVEGNWA 121
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QLEGKW 9
QLEGKW
Sbjct: 535 QLEGKW 540
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QLEGKW 9
QLEG+W
Sbjct: 526 QLEGRW 531
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 5 LEGKWA 10
L+GKWA
Sbjct: 778 LKGKWA 783
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 5 LEGKWA 10
L+GKWA
Sbjct: 778 LKGKWA 783
>sp|VE2_HPV34|REGULATORY protein E2|Human papillomavirus type 34
Query: 5 LEGKW 9
LEGKW
Sbjct: 142 LEGKW 146
>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain
Query: 5 LEGKWA 10
LEG WA
Sbjct: 297 LEGNWA 302
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 5 LEGKWA 10
LEG WA
Sbjct: 297 LEGNWA 302
>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain
Query: 5 LEGKWA 10
LEG WA
Sbjct: 297 LEGNWA 302
>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain
Query: 5 LEGKWA 10
LEG WA
Sbjct: 297 LEGNWA 302
>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)
Query: 5 LEGKWA 10
LEG WA
Sbjct: 297 LEGNWA 302
>sp|TAX_HTL1L|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 FGNQLEGKW 9
FG+ ++G W
Sbjct: 20 FGDCVQGDW 28
>sp|TAX_HTL1F|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 FGNQLEGKW 9
FG+ ++G W
Sbjct: 20 FGDCVQGDW 28
>sp|TAX_HTL1C|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 FGNQLEGKW 9
FG+ ++G W
Sbjct: 20 FGDCVQGDW 28
>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 FGNQLEGKW 9
FG+ ++G W
Sbjct: 20 FGDCVQGDW 28
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 FGNQLEGK 8
+G Q+EG+
Sbjct: 693 YGQQVEGR 700
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 FGNQLEGK 8
+G Q+EG+
Sbjct: 693 YGQQVEGR 700
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 GNQLEGKW 9
G +LEG+W
Sbjct: 1147 GWKLEGEW 1154
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 FGNQLEGKW 9
+ NQ++G W
Sbjct: 1046 YHNQIKGPW 1054
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 4 QLEGKW 9
+LEG+W
Sbjct: 1419 KLEGEW 1424
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 4 QLEGKW 9
+LEG+W
Sbjct: 1419 KLEGEW 1424
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 FGNQLEGKWA 10
G QL GK+A
Sbjct: 2019 LGRQLLGKFA 2028
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 FGNQLEGKWA 10
G QL GK+A
Sbjct: 2018 LGRQLLGKFA 2027
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 FGNQLEGKWA 10
G QL GK+A
Sbjct: 2016 LGRQLLGKFA 2025
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 GNQLEGKW 9
G +LEG+W
Sbjct: 1557 GWKLEGEW 1564
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 GNQLEGKW 9
G +LEG+W
Sbjct: 1557 GWKLEGEW 1564
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 GNQLEGKW 9
G +LEG+W
Sbjct: 1557 GWKLEGEW 1564
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 GNQLEGKW 9
G +LEG+W
Sbjct: 1557 GWKLEGEW 1564
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 GNQLEGKW 9
G +LEG+W
Sbjct: 1557 GWKLEGEW 1564
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 GNQLEGKW 9
G +LEG+W
Sbjct: 1557 GWKLEGEW 1564
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 GNQLEGKW 9
G +LEG+W
Sbjct: 1557 GWKLEGEW 1564
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 1 FGNQLEGK 8
FG+++EG+
Sbjct: 156 FGSEMEGE 163
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 5 LEGKWA 10
LEG WA
Sbjct: 934 LEGVWA 939
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 QLEGKW 9
+LEG+W
Sbjct: 1570 KLEGRW 1575
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 4 QLEGKW 9
+LEG+W
Sbjct: 1570 KLEGRW 1575
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 QLEGKW 9
+LEG+W
Sbjct: 1570 KLEGRW 1575
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 4 QLEGKW 9
+LEG+W
Sbjct: 1570 KLEGRW 1575
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 4 QLEGKW 9
+LEG+W
Sbjct: 1570 KLEGRW 1575
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 4 QLEGKW 9
+LEG+W
Sbjct: 1570 KLEGRW 1575
>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 5 LEGKWA 10
+EG WA
Sbjct: 116 IEGNWA 121
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 4 QLEGKW 9
+LEG+W
Sbjct: 1587 KLEGRW 1592
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 2 GNQLEGK 8
GN+ EG+
Sbjct: 538 GNEFEGR 544
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 2 GNQLEGK 8
GN+ EG+
Sbjct: 536 GNEFEGR 542
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 FGNQLEGKW 9
F L+GKW
Sbjct: 774 FAWYLKGKW 782
>sp|FUS_HRSVB|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 3 NQLEGK 8
N+LEGK
Sbjct: 460 NKLEGK 465
>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 3 NQLEGK 8
N+LEGK
Sbjct: 460 NKLEGK 465
>sp|B8_HHV6Z|PROTEIN B8|Human herpesvirus 6B (strain Z29)
Query: 1 FGNQLEGKW 9
F ++L+G+W
Sbjct: 189 FPHKLKGQW 197
>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)
Query: 5 LEGKWA 10
+EG WA
Sbjct: 116 VEGNWA 121
>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)
Query: 5 LEGKWA 10
+EG WA
Sbjct: 116 VEGNWA 121
>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)
Query: 5 LEGKWA 10
+EG WA
Sbjct: 116 VEGNWA 121
>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins
Query: 5 LEGKWA 10
+EG WA
Sbjct: 116 VEGNWA 121
>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)
Query: 5 LEGKWA 10
+EG WA
Sbjct: 116 VEGNWA 121
>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 5 LEGKWA 10
+EG WA
Sbjct: 116 VEGNWA 121
>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)
Query: 5 LEGKWA 10
+EG WA
Sbjct: 116 VEGNWA 121
>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)
Query: 5 LEGKWA 10
+EG WA
Sbjct: 116 VEGNWA 121
>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)
Query: 5 LEGKWA 10
+EG WA
Sbjct: 116 VEGNWA 121
>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)
Query: 5 LEGKWA 10
+EG WA
Sbjct: 116 VEGNWA 121
>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 5 LEGKWA 10
+EG WA
Sbjct: 116 VEGNWA 121
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 5 LEGKWA 10
+EG WA
Sbjct: 116 VEGNWA 121
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 4 QLEGKW 9
+L+GKW
Sbjct: 1570 KLDGKW 1575
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 4 QLEGKW 9
+L+GKW
Sbjct: 1570 KLDGKW 1575
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 2 GNQLEGKW 9
GN +E W
Sbjct: 340 GNNIEFSW 347
13|Sequence|61|70|EGKWAVLGTL
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 EGKWAVLGTL 10
EG W V+G L
Sbjct: 350 EGHWGVIGAL 359
>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)
Query: 1 EGKWAVLGTL 10
EG WA+ G +
Sbjct: 117 EGNWALTGGM 126
>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)
Query: 1 EGKWAVLGTL 10
EG WA+ G +
Sbjct: 117 EGNWALTGGM 126
>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)
Query: 1 EGKWAVLGTL 10
EG WA+ G +
Sbjct: 117 EGNWALTGGM 126
>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins
Query: 1 EGKWAVLGTL 10
EG WA+ G +
Sbjct: 117 EGNWALTGGM 126
>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)
Query: 1 EGKWAVLGTL 10
EG WA+ G +
Sbjct: 117 EGNWALTGGM 126
>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)
Query: 1 EGKWAVLGTL 10
EG WA+ G +
Sbjct: 117 EGNWALTGGM 126
>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 1 EGKWAVLGTL 10
EG WA+ G +
Sbjct: 117 EGNWALTGGM 126
>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)
Query: 1 EGKWAVLGTL 10
EG WA+ G +
Sbjct: 117 EGNWALTGGM 126
>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)
Query: 1 EGKWAVLGTL 10
EG WA+ G +
Sbjct: 117 EGNWALTGGM 126
>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)
Query: 1 EGKWAVLGTL 10
EG WA+ G +
Sbjct: 117 EGNWALTGGM 126
>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)
Query: 1 EGKWAVLGTL 10
EG WA+ G +
Sbjct: 117 EGNWALTGGM 126
>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 1 EGKWAVLGTL 10
EG WA+ G +
Sbjct: 117 EGNWALTGGM 126
>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 1 EGKWAVLG 8
EG WA+ G
Sbjct: 117 EGNWALTG 124
>sp|VE4_HPV47|PROTEIN E4|Human papillomavirus 47
Query: 1 EGKWAVLGT 9
EG W LGT
Sbjct: 220 EGYWRKLGT 228
>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain
Query: 1 EGKWAVL 7
EG WA L
Sbjct: 298 EGNWATL 304
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 1 EGKWAVL 7
EG WA L
Sbjct: 298 EGNWATL 304
>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain
Query: 1 EGKWAVL 7
EG WA L
Sbjct: 298 EGNWATL 304
>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain
Query: 1 EGKWAVL 7
EG WA L
Sbjct: 298 EGNWATL 304
>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)
Query: 1 EGKWAVL 7
EG WA L
Sbjct: 298 EGNWATL 304
>sp|PG067_VARV|PROTEIN OPG067|Variola virus
Query: 3 KWAVLGT 9
KW ++GT
Sbjct: 195 KWRIIGT 201
>sp|PG067_VAR67|PROTEIN OPG067|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 KWAVLGT 9
KW ++GT
Sbjct: 195 KWRIIGT 201
>sp|PG067_VACCD|PROTEIN OPG067|Vaccinia virus (strain Dairen I)
Query: 3 KWAVLGT 9
KW ++GT
Sbjct: 195 KWRIIGT 201
>sp|PG067_VACCC|PROTEIN OPG067|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 KWAVLGT 9
KW ++GT
Sbjct: 195 KWRIIGT 201
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 GKWAVLGTL 10
G W ++G L
Sbjct: 351 GHWGIIGAL 359
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 2 GKWAVLGTL 10
G W V+G L
Sbjct: 4 GLWVVMGVL 12
>sp|NCAP_DUVV|NUCLEOPROTEIN virus (DUVV)
Query: 1 EGKWAVLG 8
EG WA G
Sbjct: 117 EGNWAQTG 124
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 1 EGKWAVLG 8
EG WA G
Sbjct: 117 EGNWAQAG 124
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 EGKWAVLGT 9
E +W V GT
Sbjct: 358 EDEWQVFGT 366
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 EGKWAVLG 8
+GKW+ L
Sbjct: 994 KGKWSTLA 1001
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 EGKWAVLG 8
+GKW+ L
Sbjct: 994 KGKWSTLA 1001
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 EGKWAVLG 8
+GKW+ L
Sbjct: 994 KGKWSTLA 1001
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 EGKWAVLGT 9
E +W V GT
Sbjct: 358 EDEWQVFGT 366
>sp|ICP27_HHV2H|MRNA export factor|Human herpesvirus 2 (strain HG52)
Query: 2 GKWAVLGT 9
G W+ LGT
Sbjct: 103 GVWSRLGT 110
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 4 WAVLG 8
WA+LG
Sbjct: 979 WAILG 983
>sp|TEG7_HHV6Z|TEGUMENT protein UL51 homolog|Human herpesvirus 6B (strain Z29)
Query: 2 GKWAVLG 8
G W V+G
Sbjct: 4 GYWGVMG 10
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 2 GKWAVL 7
GKW +L
Sbjct: 395 GKWIIL 400
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 EGKWAVL 7
EG+W +L
Sbjct: 948 EGEWEML 954
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 EGKWAVL 7
EG+W +L
Sbjct: 950 EGEWEML 956
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 1 EGKWAVL 7
EG+W +L
Sbjct: 943 EGEWEML 949
>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 EGKWA 5
+GKWA
Sbjct: 52 KGKWA 56
>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 KWAVLG 8
KW VLG
Sbjct: 263 KWIVLG 268
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 KWAVLG 8
KW VLG
Sbjct: 263 KWIVLG 268
14|Sequence|66|75|VLGTLLQEYG
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 VLGTLLQ 7
VLG+LLQ
Sbjct: 266 VLGSLLQ 272
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 VLGTLLQEY 9
+L TLLQE+
Sbjct: 1100 LLHTLLQEW 1108
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 VLGTLLQ 7
+LG+LLQ
Sbjct: 265 ILGSLLQ 271
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 VLGTLLQ 7
+LG+LLQ
Sbjct: 265 ILGSLLQ 271
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 4 TLLQEY 9
TLLQ+Y
Sbjct: 253 TLLQQY 258
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 2 LGTLLQEYG 10
L LLQ YG
Sbjct: 154 LEALLQTYG 162
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 2 LGTLLQEYG 10
L LLQ YG
Sbjct: 154 LEALLQTYG 162
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 2 LGTLLQEYG 10
L LLQ YG
Sbjct: 154 LEALLQTYG 162
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 LGTLLQEYG 10
L T+L +YG
Sbjct: 182 LKTMLDKYG 190
>sp|FUS_PIV5|FUSION glycoprotein F0|Parainfluenza virus 5 (strain W3)
Query: 1 VLGTLLQEY 9
V G+L+Q Y
Sbjct: 311 VTGSLIQAY 319
>sp|A52_VACCC|PROTEIN A52|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LGTLLQEY 9
+ T+L+EY
Sbjct: 56 MSTILEEY 63
15|Sequence|71|80|LQEYGLLQRR
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 LQEYGLLQRR 10
L EY +L+RR
Sbjct: 2164 LPEYSVLRRR 2173
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 LQEYGLLQRR 10
L EY +L+RR
Sbjct: 2165 LPEYSVLRRR 2174
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 3 EYGLLQR 9
EYG+L+R
Sbjct: 2273 EYGMLER 2279
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 EYGLLQR 9
EYG+L+R
Sbjct: 2273 EYGMLER 2279
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 LQEYGLLQRR 10
LQ+ G L+RR
Sbjct: 1297 LQDSGALKRR 1306
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 LQEYGLLQRR 10
LQ+ G L+RR
Sbjct: 1289 LQDSGALKRR 1298
>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957
Query: 2 QEYGLLQRR 10
+E+G L+RR
Sbjct: 408 KEFGNLERR 416
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 LQEYGLL 7
LQ YGLL
Sbjct: 952 LQSYGLL 958
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 LQEYGLL 7
LQ YGLL
Sbjct: 952 LQSYGLL 958
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 LQEYGLL 7
LQ YGLL
Sbjct: 952 LQSYGLL 958
>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 QEYGLLQR 9
Q+YG LQ+
Sbjct: 288 QKYGKLQK 295
>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)
Query: 2 QEYGLLQR 9
Q+YG LQ+
Sbjct: 291 QKYGKLQK 298
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 EYGLLQR 9
EYG+L++
Sbjct: 2274 EYGMLEK 2280
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 EYGLLQR 9
EYG+L++
Sbjct: 2274 EYGMLEK 2280
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 EYGLLQR 9
EYG+L++
Sbjct: 2274 EYGMLEK 2280
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 EYGLLQR 9
EYG+L++
Sbjct: 2274 EYGMLEK 2280
>sp|PG189_MONPV|ANKYRIN repeat protein OPG189|Monkeypox virus (MPXV)
Query: 1 LQEYGLLQR 9
+QEY L+++
Sbjct: 36 IQEYNLVRK 44
>sp|RP19_VAR67|DNA-DIRECTED RNA polymerase 19 kDa|Variola virus (isolate
Query: 2 QEYGLLQR 9
+ Y LLQR
Sbjct: 88 ESYNLLQR 95
>sp|RP19_VACCC|DNA-DIRECTED RNA polymerase 19 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 QEYGLLQR 9
+ Y LLQR
Sbjct: 88 ESYNLLQR 95
>sp|RP19_VACCA|DNA-DIRECTED RNA polymerase 19 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 QEYGLLQR 9
+ Y LLQR
Sbjct: 88 ESYNLLQR 95
>sp|RP19_MONPV|DNA-DIRECTED RNA polymerase 19 kDa|Monkeypox virus (MPXV)
Query: 2 QEYGLLQR 9
+ Y LLQR
Sbjct: 85 ESYNLLQR 92
16|Sequence|76|85|LLQRRLENVE
>sp|C10_VAR67|PROTEIN C10|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LLQRRLENVE 10
+L RRL+NVE
Sbjct: 56 ILYRRLKNVE 65
>sp|C10_VACCC|PROTEIN C10|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LLQRRLENVE 10
+L RRL+NVE
Sbjct: 56 ILYRRLKNVE 65
>sp|C10_VACCA|PROTEIN C10|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LLQRRLENVE 10
+L RRL+NVE
Sbjct: 56 ILYRRLKNVE 65
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 LQRRLENVE 10
L RR+EN+E
Sbjct: 459 LTRRVENIE 467
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LQRRLENVE 10
L RR+EN+E
Sbjct: 459 LTRRVENIE 467
>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957
Query: 2 LQRRLENV 9
L+RRLEN+
Sbjct: 413 LERRLENL 420
>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957
Query: 2 LQRRLENV 9
L+RRLEN+
Sbjct: 413 LERRLENL 420
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 2 LQRRLENV 9
L+RRLEN+
Sbjct: 413 LERRLENL 420
>sp|HEMA_I96A3|HEMAGGLUTININ A virus (strain A/China:Nanchang/11/1996
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 416 LERRMENL 423
>sp|HEMA_I96A2|HEMAGGLUTININ A virus (strain A/USA:Memphis/10/1996
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 417 LERRMENL 424
>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 416 LERRMENL 423
>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 416 LERRMENL 423
>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 416 LERRMENL 423
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LQRRLENV 9
LQRRLE++
Sbjct: 223 LQRRLEDL 230
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 2 LQRRLENV 9
LQRRLE++
Sbjct: 223 LQRRLEDL 230
>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 417 LERRIENL 424
>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 417 LERRIENL 424
>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 417 LERRIENL 424
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 2 LQRRLENV 9
LQRRLE++
Sbjct: 223 LQRRLEDL 230
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 LQRRLENV 9
LQRRLE++
Sbjct: 223 LQRRLEDL 230
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 411 LERRIENL 418
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 408 LERRIENL 415
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 408 LERRIENL 415
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 408 LERRIENL 415
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 408 LERRIENL 415
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 415 LERRVENL 422
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 415 LERRIENL 422
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 417 LERRIENL 424
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 419 LERRIENL 426
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 2 LQRRLENV 9
L++RLEN+
Sbjct: 413 LEKRLENL 420
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 419 LERRIENL 426
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 419 LERRIENL 426
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 419 LERRIENL 426
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 419 LERRIENL 426
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 419 LERRIENL 426
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 419 LERRIENL 426
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 419 LERRIENL 426
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 418 LERRIENL 425
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 419 LERRIENL 426
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 LQRRLENV 9
L+RR+EN+
Sbjct: 419 LERRIENL 426
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 4 RRLENVE 10
R+L+NVE
Sbjct: 391 RKLDNVE 397
17|Sequence|81|90|LENVENLLRN
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 1 LENVENLLRN 10
L+N+ N+L N
Sbjct: 184 LQNISNILHN 193
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 2 ENVENLLR 9
+N+E LLR
Sbjct: 697 DNIEQLLR 704
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 2 ENVENLLR 9
+N+E LLR
Sbjct: 697 DNIEQLLR 704
>sp|GCVK_HHV7J|PROBABLE ganciclovir kinase|Human herpesvirus 7 (strain JI)
Query: 1 LENVEN 6
LENVEN
Sbjct: 267 LENVEN 272
18|Sequence|86|95|NLLRNRNFWI
>sp|NEC1_HCMVM|NUCLEAR egress protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NLLRNRNFW 9
N+++NRNF+
Sbjct: 147 NIMKNRNFY 155
>sp|NEC1_HCMVA|NUCLEAR egress protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NLLRNRNFW 9
N+++NRNF+
Sbjct: 147 NIMKNRNFY 155
>sp|PG181_MONPV|PROTEIN OPG181|Monkeypox virus (MPXV)
Query: 1 NLLRNRNF 8
NL+RNR++
Sbjct: 310 NLIRNRDY 317
>sp|PG181_VACCC|PROTEIN OPG181|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NLLRNRNF 8
NL+RNR++
Sbjct: 310 NLIRNRDY 317
>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I77AA|NUCLEOPROTEIN A virus (strain A/Brazil/11/1978
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 NRNFW 9
NR+FW
Sbjct: 629 NRSFW 633
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 NRNFW 9
NR+FW
Sbjct: 629 NRSFW 633
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 NRNFW 9
NR+FW
Sbjct: 629 NRSFW 633
>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 NLLRNRNF 8
NL+ RNF
Sbjct: 634 NLIEGRNF 641
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 NLLRNRNF 8
NL+ RNF
Sbjct: 634 NLIEGRNF 641
>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 LRNRNFW 9
+ +RNFW
Sbjct: 201 INDRNFW 207
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 1 NLLRNRNFWI 10
NLL R +W+
Sbjct: 429 NLLLVRAYWL 438
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 1 NLLRNRNFWI 10
NLL R +W+
Sbjct: 427 NLLLVRAYWL 436
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 NRNFW 9
N NFW
Sbjct: 77 NSNFW 81
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 NRNFW 9
N NFW
Sbjct: 77 NSNFW 81
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 NRNFW 9
N NFW
Sbjct: 77 NSNFW 81
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 NRNFW 9
N NFW
Sbjct: 77 NSNFW 81
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 1 NLLRNRNF 8
NL+ RNF
Sbjct: 634 NLVEGRNF 641
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 1 NLLRNRNF 8
NL+ RNF
Sbjct: 634 NLVEGRNF 641
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 NLLRNRNF 8
NL+ RNF
Sbjct: 634 NLVEGRNF 641
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 LRNRNFW 9
LRNR +W
Sbjct: 152 LRNRWYW 158
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 3 LRNRNFW 9
LRNR +W
Sbjct: 156 LRNRWYW 162
>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 LRNRNFW 9
LRNR +W
Sbjct: 149 LRNRWYW 155
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 3 LRNRNFW 9
LRNR +W
Sbjct: 142 LRNRWYW 148
>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate
Query: 3 LRNRNFW 9
LRNR +W
Sbjct: 142 LRNRWYW 148
>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human
Query: 3 LRNRNFWI 10
L NR++W+
Sbjct: 313 LFNRSYWL 320
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NLLRNRNF 8
N LRNR F
Sbjct: 325 NSLRNREF 332
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 5 NRNFWI 10
+RN WI
Sbjct: 670 HRNLWI 675
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 NLLRNRNFWI 10
+LLR RN +I
Sbjct: 1793 HLLRGRNHFI 1802
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 3 LRNRNFW 9
LRNR +W
Sbjct: 150 LRNRWYW 156
>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 LRNRNFW 9
LRNR +W
Sbjct: 141 LRNRWYW 147
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 3 LRNRNFW 9
LRNR +W
Sbjct: 150 LRNRWYW 156
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 3 LRNRNFW 9
LRNR +W
Sbjct: 150 LRNRWYW 156
>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 LRNRNFW 9
LRNR +W
Sbjct: 141 LRNRWYW 147
>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 LRNRNFW 9
LRNR +W
Sbjct: 142 LRNRWYW 148
>sp|PG181_VARV|PROTEIN OPG181|Variola virus
Query: 1 NLLRNRNF 8
NL+RN+++
Sbjct: 310 NLIRNQDY 317
>sp|PG181_VAR67|PROTEIN OPG181|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 NLLRNRNF 8
NL+RN+++
Sbjct: 310 NLIRNQDY 317
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 3 LRNRNFW 9
LRNR +W
Sbjct: 150 LRNRWYW 156
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 3 LRNRNFW 9
L+N FW
Sbjct: 439 LKNYTFW 445
>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 3 LRNRNFW 9
LRNR +W
Sbjct: 150 LRNRWYW 156
>sp|GN_VZVO|ENVELOPE glycoprotein N|Varicella-zoster virus (strain Oka vaccine)
Query: 6 RNFW 9
RNFW
Sbjct: 31 RNFW 34
>sp|GN_VZVD|ENVELOPE glycoprotein N|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 6 RNFW 9
RNFW
Sbjct: 31 RNFW 34
>sp|U21_HHV6U|GLYCOPROTEIN U21|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LLRNRNFWI 10
L RN N WI
Sbjct: 160 LDRNNNSWI 168
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 NLLRNRNFWI 10
+LLR + WI
Sbjct: 1959 SLLRKLHHWI 1968
>sp|NSP3_ROTHK|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 3 LRNRNFWI 10
+RNRN+ I
Sbjct: 82 IRNRNWMI 89
19|Sequence|91|100|RNFWILRLPP
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 NFWILRLPP 10
+FW+LR P
Sbjct: 721 DFWLLRFQP 729
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 NFWILRLPP 10
+FW+LR P
Sbjct: 721 DFWLLRFQP 729
>sp|CVC1_HHV7J|CAPSID vertex component 1|Human herpesvirus 7 (strain JI)
Query: 1 RNFWILRL 8
R+FWIL L
Sbjct: 315 RDFWILSL 322
>sp|ETF1_YMTV5|EARLY transcription factor 70 kDa|Yaba monkey tumor virus (strain
Query: 1 RNFWILRLP 9
RN W + +P
Sbjct: 433 RNIWFMTIP 441
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 RNFWILRL 8
RNFW+ L
Sbjct: 863 RNFWLYNL 870
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 NFWILRLP 9
N++I RLP
Sbjct: 606 NYYISRLP 613
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 NFWILRLP 9
N++I RLP
Sbjct: 606 NYYISRLP 613
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 WILRLP 9
WILR P
Sbjct: 140 WILRHP 145
>sp|C8_VACCC|PROTEIN C8|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RNFWI 5
+NFWI
Sbjct: 68 KNFWI 72
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 RNFWILRLP 9
++ W+LR P
Sbjct: 3150 QDLWLLRKP 3158
>sp|UL62_HCMVA|UNCHARACTERIZED protein UL62|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RNFWILRLPP 10
R F + R PP
Sbjct: 160 RGFTVFRTPP 169
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 1 RNFWILRLPP 10
RN + R+PP
Sbjct: 114 RNLFSPRVPP 123
>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)
Query: 1 RNFWIL 6
R+FW+L
Sbjct: 33 RDFWML 38
>sp|NSS_RVFVZ|NON-STRUCTURAL protein S|Rift valley fever virus (strain
Query: 1 RNFWILRLPP 10
RN WI +PP
Sbjct: 235 RNNWIPVIPP 244
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 RNFWILRLP 9
RNF + R+P
Sbjct: 443 RNFPVTRVP 451
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 4 WILRLPP 10
W+ ++PP
Sbjct: 219 WLHQIPP 225
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 4 WILRLPP 10
W+ +PP
Sbjct: 226 WLQHMPP 232
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 1 RNFWILRLPP 10
+ +W LPP
Sbjct: 168 QKYWAAALPP 177
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 RNFWILRLPP 10
RNF + + PP
Sbjct: 444 RNFPVAQAPP 453
>sp|UL09_HCMVA|UNCHARACTERIZED protein UL9|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 WILRLP 9
W+LR P
Sbjct: 119 WVLRTP 124
20|Sequence|96|105|LRLPPGSKGE
>sp|VPX_HV2D1|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 2 RLPPGSKGE 10
R+PPG+ GE
Sbjct: 7 RVPPGNSGE 15
>sp|VPX_HV2G1|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 2 RLPPGSKGE 10
R+PPG+ GE
Sbjct: 7 RVPPGNSGE 15
>sp|VPX_HV2EH|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 2 RLPPGSKGE 10
R+PPG+ GE
Sbjct: 6 RVPPGNSGE 14
>sp|VPX_HV2BE|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 2 RLPPGSKGE 10
R+PPG+ GE
Sbjct: 7 RVPPGNSGE 15
>sp|VPX_HV2SB|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 3 LPPGSKGE 10
+PPG+ GE
Sbjct: 8 IPPGNSGE 15
>sp|VPX_HV2NZ|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 3 LPPGSKGE 10
+PPG+ GE
Sbjct: 8 VPPGNSGE 15
>sp|VPX_HV2CA|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 3 LPPGSKGE 10
+PPG+ GE
Sbjct: 8 VPPGNSGE 15
>sp|VPX_HV2ST|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 3 LPPGSKGE 10
+PPG+ GE
Sbjct: 8 IPPGNSGE 15
>sp|VPX_HV2RO|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 3 LPPGSKGE 10
+PPG+ GE
Sbjct: 8 VPPGNSGE 15
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 LRLPPGS 7
L LPPGS
Sbjct: 2028 LHLPPGS 2034
>sp|VPX_HV2UC|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 2 RLPPGSKGE 10
R+PPG+ E
Sbjct: 6 RVPPGNSDE 14
>sp|VPX_HV2D2|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 2 RLPPGSKGE 10
R+PPG+ E
Sbjct: 6 RVPPGNSDE 14
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 4 PPGSKGE 10
PP +KGE
Sbjct: 685 PPETKGE 691
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 1 LRLPPGSK 8
++LPPG K
Sbjct: 375 VKLPPGIK 382
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LRLPPGSK 8
+RL PGSK
Sbjct: 19 IRLKPGSK 26
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 LRLPPG 6
LRLPP
Sbjct: 789 LRLPPA 794
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 LRLPPGSK 8
+RL PGSK
Sbjct: 19 IRLKPGSK 26
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 LRLPPG 6
L+LPPG
Sbjct: 655 LQLPPG 660
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LRLPPGSK 8
+RL PGSK
Sbjct: 19 IRLRPGSK 26
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 LRLPPG 6
L+LPPG
Sbjct: 655 LQLPPG 660
>sp|POLG_LIVN1|GENOME polyprotein|Louping ill virus (strain Negishi
Query: 1 LRLPPG 6
++LPPG
Sbjct: 374 MQLPPG 379
>sp|POLG_LIVNO|GENOME polyprotein|Louping ill virus (isolate Sheep
Query: 1 LRLPPG 6
++LPPG
Sbjct: 374 MQLPPG 379
>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)
Query: 1 LRLPPG 6
++LPPG
Sbjct: 374 MQLPPG 379
>sp|VE2_HPV37|REGULATORY protein E2|Human papillomavirus 37
Query: 1 LRLPPG 6
++LPPG
Sbjct: 438 MKLPPG 443
>sp|POLG_LIVSB|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/SB
Query: 1 LRLPPG 6
++LPPG
Sbjct: 374 MQLPPG 379
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 LRLPPG 6
++LPPG
Sbjct: 654 MQLPPG 659
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 LRLPPG 6
++LPPG
Sbjct: 654 MQLPPG 659
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 LRLPPG 6
++LPPG
Sbjct: 654 MQLPPG 659
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 LRLPPG 6
++LPPG
Sbjct: 654 MQLPPG 659
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 LRLPPG 6
++LPPG
Sbjct: 654 MQLPPG 659
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 LRLPPG 6
++LPPG
Sbjct: 654 MQLPPG 659
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 LRLPPG 6
++LPPG
Sbjct: 654 MQLPPG 659
>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 LRLPPGSK 8
+RL PGSK
Sbjct: 19 IRLRPGSK 26
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 1 LRLPPG 6
++LPPG
Sbjct: 654 MQLPPG 659
>sp|F13_MCV1|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 1
Query: 5 PGSKGE 10
PG+KG+
Sbjct: 306 PGAKGD 311
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 LRLPPG 6
++LPPG
Sbjct: 653 MQLPPG 658
>sp|VE2_HPV17|REGULATORY protein E2|Human papillomavirus 17
Query: 1 LRLPPG 6
++LPPG
Sbjct: 436 MKLPPG 441
>sp|VE2_HPV15|REGULATORY protein E2|Human papillomavirus 15
Query: 1 LRLPPG 6
++LPPG
Sbjct: 366 MKLPPG 371
21|Sequence|101|110|GSKGESPKEW
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 GESPKEW 10
G+SP EW
Sbjct: 645 GQSPPEW 651
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 GESPKEW 10
G+SP EW
Sbjct: 645 GQSPPEW 651
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 GESPKEW 10
G+SP EW
Sbjct: 645 GQSPPEW 651
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 SKGESPKEW 10
SKGE+P E+
Sbjct: 216 SKGETPIEF 224
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 GSKGESPK 8
G+ GE+PK
Sbjct: 645 GAGGEAPK 652
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 GSKGESPK 8
G+ GE+PK
Sbjct: 645 GAGGEAPK 652
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 1 GSKGESPK 8
G+ GE+PK
Sbjct: 645 GAGGEAPK 652
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 GSKGESPK 8
G+ GE+PK
Sbjct: 645 GAGGEAPK 652
>sp|ETF1_YMTV5|EARLY transcription factor 70 kDa|Yaba monkey tumor virus (strain
Query: 1 GSKGESPK 8
GS+G +PK
Sbjct: 369 GSQGTNPK 376
>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1
Query: 1 GSKGESPK 8
GS+G +PK
Sbjct: 369 GSQGTNPK 376
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 SKGESPKEW 10
S G SP+ W
Sbjct: 2693 SPGSSPRPW 2701
>sp|US10_VZVD|VIRION protein US10 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 GSKGESP 7
GS+GE P
Sbjct: 5 GSRGEHP 11
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 KGESPK 8
KGE PK
Sbjct: 267 KGECPK 272
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 KGESPK 8
KGE PK
Sbjct: 267 KGECPK 272
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 KGESPKEW 10
KGE EW
Sbjct: 206 KGEITDEW 213
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 GESPKEW 10
GE P +W
Sbjct: 1915 GEGPVQW 1921
22|Sequence|106|115|SPKEWGKLED
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 1 SPKEWGK 7
+P+EWG+
Sbjct: 72 APREWGQ 78
>sp|PG072_VARV|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Variola virus
Query: 1 SPKEWGK 7
+PK WG+
Sbjct: 2 NPKHWGR 8
>sp|PG072_VAR67|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Variola virus (isolate
Query: 1 SPKEWGK 7
+PK WG+
Sbjct: 2 NPKHWGR 8
>sp|PG072_VACCC|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Vaccinia virus (strain
Query: 1 SPKEWGK 7
+PK WG+
Sbjct: 2 NPKHWGR 8
>sp|PG072_MONPV|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Monkeypox virus (MPXV)
Query: 1 SPKEWGK 7
+PK WG+
Sbjct: 2 NPKHWGR 8
>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus
Query: 2 PKEWG 6
PKEWG
Sbjct: 72 PKEWG 76
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 SPKEW 5
+PKEW
Sbjct: 726 NPKEW 730
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 SPKEW 5
+PKEW
Sbjct: 726 NPKEW 730
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 SPKEWGKLE 9
+PK++GK E
Sbjct: 1506 APKQFGKTE 1514
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SPKEWGK 7
SP EW K
Sbjct: 647 SPPEWLK 653
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SPKEWGK 7
SP EW K
Sbjct: 647 SPPEWLK 653
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SPKEWGK 7
SP EW K
Sbjct: 647 SPPEWLK 653
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 2 PKEW 5
PKEW
Sbjct: 359 PKEW 362
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 SPKEWG 6
+PK WG
Sbjct: 203 APKTWG 208
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 SPKEWG 6
+PK WG
Sbjct: 203 APKTWG 208
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 1 SPKEWGKLED 10
SP++W +L +
Sbjct: 236 SPQDWQRLTN 245
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 SPKEWG 6
+PK WG
Sbjct: 203 APKTWG 208
>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)
Query: 2 PKEWGKL 8
P+ WG+L
Sbjct: 233 PRTWGRL 239
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 1 SPKEWGKLED 10
SP++W +L +
Sbjct: 237 SPQDWQRLTN 246
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 SPKEWGKLED 10
SP++W +L +
Sbjct: 237 SPQDWQRLTN 246
23|Sequence|111|120|GKLEDWQKEL
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 LEDWQKE 9
LEDWQ+E
Sbjct: 983 LEDWQRE 989
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 3 LEDWQKE 9
L+DWQ+E
Sbjct: 979 LDDWQRE 985
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 1 GKLEDWQ 7
G LEDWQ
Sbjct: 408 GILEDWQ 414
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 1 GKLEDWQ 7
G LEDWQ
Sbjct: 408 GILEDWQ 414
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 1 GKLEDWQ 7
G LEDWQ
Sbjct: 408 GILEDWQ 414
>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+DW+K
Sbjct: 11 GKLDDWEK 18
>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+DW+K
Sbjct: 11 GKLDDWEK 18
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+DW+K
Sbjct: 11 GKLDDWEK 18
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+DW+K
Sbjct: 11 GKLDDWEK 18
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 3 LEDWQKE 9
LE+WQ+E
Sbjct: 984 LEEWQEE 990
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 3 LEDWQKE 9
LE+WQ+E
Sbjct: 981 LEEWQEE 987
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 3 LEDWQKE 9
LE+WQ+E
Sbjct: 980 LEEWQEE 986
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 3 LEDWQ 7
LEDWQ
Sbjct: 428 LEDWQ 432
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 3 LEDWQ 7
LEDWQ
Sbjct: 424 LEDWQ 428
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 3 LEDWQ 7
LEDWQ
Sbjct: 429 LEDWQ 433
>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human
Query: 3 LEDWQ 7
LEDWQ
Sbjct: 405 LEDWQ 409
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 3 LEDWQ 7
LEDWQ
Sbjct: 398 LEDWQ 402
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 LEDWQKE 9
LE+WQ E
Sbjct: 979 LEEWQAE 985
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 LEDWQKE 9
LE+WQ E
Sbjct: 979 LEEWQAE 985
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 LEDWQKE 9
LE+WQ E
Sbjct: 979 LEEWQAE 985
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 3 LEDWQ 7
LEDWQ
Sbjct: 415 LEDWQ 419
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 3 LEDWQ 7
LEDWQ
Sbjct: 424 LEDWQ 428
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 3 LEDWQ 7
LEDWQ
Sbjct: 408 LEDWQ 412
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 3 LEDWQ 7
LEDWQ
Sbjct: 415 LEDWQ 419
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 3 LEDWQ 7
LEDWQ
Sbjct: 415 LEDWQ 419
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 3 LEDWQKE 9
+EDW+ E
Sbjct: 990 IEDWEAE 996
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 3 LEDWQKE 9
+EDW+ E
Sbjct: 990 IEDWEAE 996
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 1 GKLEDWQ 7
G LE+WQ
Sbjct: 408 GILEEWQ 414
>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL++W+K
Sbjct: 11 GKLDEWEK 18
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 KLED-WQKEL 10
KLE WQK+L
Sbjct: 1757 KLEQFWQKQL 1766
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL++W+K
Sbjct: 11 GKLDEWEK 18
>sp|GAG_HV19N|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDSWEK 18
>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDKWEK 18
>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDKWEK 18
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDRWEK 18
>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDAWEK 18
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 3 LEDWQKE 9
LE+W +E
Sbjct: 981 LEEWHEE 987
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDSWEK 18
>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDAWEK 18
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 3 LEDWQK 8
LE+W+K
Sbjct: 598 LEEWKK 603
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 3 LEDWQK 8
LE+W+K
Sbjct: 598 LEEWKK 603
>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDAWEK 18
>sp|PG040_MONPV|SUPERINFECTION exclusion protein|Monkeypox virus (MPXV)
Query: 1 GKLEDWQKEL 10
KLE W +L
Sbjct: 255 AKLEYWSSQL 264
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 3 LEDWQ 7
LE+WQ
Sbjct: 445 LEEWQ 449
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 3 LEDWQ 7
LE+WQ
Sbjct: 417 LEEWQ 421
>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDKWEK 18
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDKWEK 18
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 GKLEDW 6
GK+ DW
Sbjct: 1180 GKMVDW 1185
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 GKLEDWQK 8
GK DW K
Sbjct: 1113 GKFIDWLK 1120
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LEDWQKEL 10
L +W +EL
Sbjct: 161 LTEWNREL 168
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LEDWQKEL 10
L +W +EL
Sbjct: 161 LTEWNREL 168
>sp|GAG_HV190|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDAWEK 18
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 3 LEDWQ 7
LE+WQ
Sbjct: 417 LEEWQ 421
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 3 LEDWQ 7
LE+WQ
Sbjct: 417 LEEWQ 421
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDKWEK 18
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDKWEK 18
>sp|GAG_HV196|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDAWEK 18
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 3 LEDWQ 7
LE+WQ
Sbjct: 416 LEEWQ 420
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDAWEK 18
>sp|GAG_HV193|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDAWEK 18
>sp|GAG_HV1M2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDAWEK 18
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 3 LEDWQ 7
LE+WQ
Sbjct: 415 LEEWQ 419
>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDAWEK 18
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDAWEK 18
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDAWEK 18
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 3 LEDWQ 7
LE+WQ
Sbjct: 413 LEEWQ 417
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDAWEK 18
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDAWEK 18
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDAWEK 18
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 3 LEDWQ 7
LE+WQ
Sbjct: 413 LEEWQ 417
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDAWEK 18
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDAWEK 18
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDAWEK 18
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDAWEK 18
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W+K
Sbjct: 11 GKLDRWEK 18
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 3 LEDWQ 7
LE+WQ
Sbjct: 414 LEEWQ 418
>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GKLEDWQK 8
GKL+ W++
Sbjct: 11 GKLDTWER 18
>sp|ORF3_TTVG1|UNCHARACTERIZED ORF3 protein|Torque teno midi virus 1
Query: 2 KLEDWQKE 9
K ED+QKE
Sbjct: 92 KREDFQKE 99
>sp|ICP27_HHV7J|MRNA export factor ICP27 homolog|Human herpesvirus 7 (strain JI)
Query: 4 EDWQKEL 10
+DW KE+
Sbjct: 450 KDWSKEV 456
24|Sequence|116|125|WQKELYKHVM
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W++ELYK+
Sbjct: 449 WRQELYKY 456
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W++ELYK+
Sbjct: 456 WRQELYKY 463
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 QKELYKHV 9
QK LY HV
Sbjct: 5089 QKRLYSHV 5096
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 474 WRSELYKY 481
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 482 WRSELYKY 489
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 466 WRSELYKY 473
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 2 QKELYKHV 9
Q+E YKHV
Sbjct: 1194 QREKYKHV 1201
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 473 WRSELYKY 480
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 476 WRSELYKY 483
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 478 WRSELYKY 485
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 455 WRSELYKY 462
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 471 WRSELYKY 478
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 479 WRSELYKY 486
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 476 WRSELYKY 483
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 465 WRSELYKY 472
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 469 WRSELYKY 476
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 468 WRSELYKY 475
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 476 WRSELYKY 483
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 473 WRSELYKY 480
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 470 WRSELYKY 477
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 472 WRSELYKY 479
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 466 WRSELYKY 473
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 468 WRSELYKY 475
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 478 WRSELYKY 485
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 487 WRSELYKY 494
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 469 WRSELYKY 476
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 465 WRSELYKY 472
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 486 WRNELYKY 493
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 474 WRSELYKY 481
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 475 WRSELYKY 482
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 477 WRSELYKY 484
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 491 WRSELYKY 498
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 477 WRSELYKY 484
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 469 WRSELYKY 476
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 477 WRSELYKY 484
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 479 WRSELYKY 486
>sp|C10_VAR67|PROTEIN C10|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 KELYKHV 9
+EL+KHV
Sbjct: 27 RELFKHV 33
>sp|C10_VACCC|PROTEIN C10|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 KELYKHV 9
+EL+KHV
Sbjct: 27 RELFKHV 33
>sp|C10_VACCA|PROTEIN C10|Vaccinia virus (strain Ankara) (VACV)
Query: 3 KELYKHV 9
+EL+KHV
Sbjct: 27 RELFKHV 33
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 474 WRSELYKY 481
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 479 WRSELYKY 486
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 484 WRSELYKY 491
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 479 WRSELYKY 486
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 479 WRSELYKY 486
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 478 WRSELYKY 485
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 471 WRSELYKY 478
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 485 WRSELYKY 492
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 481 WRSELYKY 488
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WQKELYKH 8
W+ ELYK+
Sbjct: 490 WRSELYKY 497
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 WQKELYKH 8
WQ LY H
Sbjct: 310 WQWTLYPH 317
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 1 WQKELYKH 8
WQ LY H
Sbjct: 310 WQWTLYPH 317
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 WQKELYKH 8
WQ LY H
Sbjct: 310 WQWTLYPH 317
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 WQKELYKH 8
WQ LY H
Sbjct: 310 WQWTLYPH 317
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 WQKELYKH 8
WQ LY H
Sbjct: 310 WQWTLYPH 317
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 WQKELYKH 8
WQ LY H
Sbjct: 308 WQWTLYPH 315
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 QKELYKHV 9
QKE++ HV
Sbjct: 692 QKEMWMHV 699
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 QKELYKHV 9
QKE++ HV
Sbjct: 692 QKEMWMHV 699
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 2 QKELYKHV 9
Q+E Y+HV
Sbjct: 1195 QREKYRHV 1202
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 2 QKELYKHV 9
Q+E Y+HV
Sbjct: 1196 QREKYRHV 1203
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 2 QKELYKHV 9
Q+E Y+HV
Sbjct: 1215 QREKYRHV 1222
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 WQKELYKHV 9
W K+LY+ V
Sbjct: 6633 WNKKLYELV 6641
>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 KELYKHVM 10
+E+Y+H++
Sbjct: 649 EEMYRHIL 656
>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)
Query: 3 KELYKHVM 10
+E+Y+H++
Sbjct: 649 EEMYRHIL 656
>sp|NCAP_EBOZM|NUCLEOPROTEIN ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 KELYKHVM 10
+E+Y+H++
Sbjct: 649 EEMYRHIL 656
>sp|AP3A_SARS|ORF3A protein|Severe acute respiratory syndrome coronavirus
Query: 1 WQKELYK 7
WQ LYK
Sbjct: 69 WQLALYK 75
>sp|NS1_INCYA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/10/1981)
Query: 1 WQKELYKH 8
W+ +Y H
Sbjct: 117 WEATMYHH 124
>sp|NS1_INCY6|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/1964)
Query: 1 WQKELYKH 8
W+ +Y H
Sbjct: 122 WEATMYHH 129
>sp|NS1_INCTA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 WQKELYKH 8
W+ +Y H
Sbjct: 117 WEATMYHH 124
>sp|NS1_INCMI|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Mississippi/1980)
Query: 1 WQKELYKH 8
W+ +Y H
Sbjct: 117 WEATMYHH 124
>sp|NS1_INCJH|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 WQKELYKH 8
W+ +Y H
Sbjct: 117 WEATMYHH 124
>sp|NS1_INCHY|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Hyogo/1/1983)
Query: 1 WQKELYKH 8
W+ +Y H
Sbjct: 122 WEATMYHH 129
>sp|NS1_INCGL|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Great
Query: 1 WQKELYKH 8
W+ +Y H
Sbjct: 117 WEATMYHH 124
>sp|NS1_INCCA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/California/1978)
Query: 1 WQKELYKH 8
W+ +Y H
Sbjct: 122 WEATMYHH 129
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 1 WQKELYKHVM 10
W +L+ HV+
Sbjct: 137 WSMQLFIHVL 146
>sp|NS1_INCAA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Ann
Query: 1 WQKELYKH 8
W+ +Y H
Sbjct: 122 WEATMYHH 129
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 WQKELYK 7
W K+LY+
Sbjct: 377 WLKDLYE 383
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 WQKELYK 7
W K+LY+
Sbjct: 377 WLKDLYE 383
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 4 ELYKHV 9
E+YKH+
Sbjct: 775 EMYKHL 780
>sp|NEF_HV2NZ|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 QKELYKH 8
+KELYK
Sbjct: 78 EKELYKQ 84
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 4 ELYKHV 9
E+YKH+
Sbjct: 775 EMYKHL 780
25|Sequence|121|130|YKHVMRGNYE
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 HVMRGNY 9
HVMRG+Y
Sbjct: 2500 HVMRGSY 2506
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 HVMRGNY 9
HVMRG+Y
Sbjct: 2500 HVMRGSY 2506
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 HVMRGNY 9
HVMRG+Y
Sbjct: 2500 HVMRGSY 2506
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 HVMRGNY 9
HVMRG+Y
Sbjct: 2500 HVMRGSY 2506
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 4 VMRGNY 9
VMRGNY
Sbjct: 2484 VMRGNY 2489
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 4 VMRGNY 9
VMRGNY
Sbjct: 2483 VMRGNY 2488
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 4 VMRGNY 9
VMRGNY
Sbjct: 2484 VMRGNY 2489
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 VMRGNY 9
VMRGNY
Sbjct: 2483 VMRGNY 2488
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 4 VMRGNY 9
VMRGNY
Sbjct: 2483 VMRGNY 2488
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 4 VMRGNY 9
VMRGNY
Sbjct: 2484 VMRGNY 2489
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 VMRGNY 9
VMRGNY
Sbjct: 2483 VMRGNY 2488
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 4 VMRGNY 9
VMRGNY
Sbjct: 2483 VMRGNY 2488
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 3 HVMRGNY 9
HV+RGN+
Sbjct: 2502 HVIRGNW 2508
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 HVMRGNY 9
HVMRG++
Sbjct: 2502 HVMRGSW 2508
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 YKHVMRGNY 9
+ +MRGNY
Sbjct: 2473 FSGLMRGNY 2481
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 YKHVMRG 7
YKH RG
Sbjct: 3635 YKHTFRG 3641
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 YKHVMRG 7
YKH RG
Sbjct: 3635 YKHTFRG 3641
Query: 1 YKHVMRGNY 9
++H++ GN+
Sbjct: 6682 FEHIVYGNF 6690
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 HVMRGNY 9
H+MRG +
Sbjct: 2501 HIMRGGW 2507
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 HVMRGNY 9
H+MRG +
Sbjct: 2498 HIMRGGW 2504
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 HVMRGNY 9
H+MRG +
Sbjct: 2501 HIMRGGW 2507
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 1 YKHVMRGNYE 10
YK++MR Y+
Sbjct: 378 YKNLMREEYK 387
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 1 YKHVMRGNYE 10
YK++MR Y+
Sbjct: 378 YKNLMREEYK 387
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 1 YKHVMRGNYE 10
YK++MR Y+
Sbjct: 378 YKNLMREEYK 387
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 4 VMRGNY 9
VMRGN+
Sbjct: 2483 VMRGNH 2488
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 4 VMRGNY 9
VMRGN+
Sbjct: 2465 VMRGNH 2470
>sp|UL28_HCMVA|UNCHARACTERIZED protein UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YKHVMRGNYE 10
+KH G YE
Sbjct: 211 FKHTFAGMYE 220
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YKHVMRGNYE 10
+KH G YE
Sbjct: 533 FKHTFAGMYE 542
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YKHVMRGNYE 10
+KH G YE
Sbjct: 532 FKHTFAGMYE 541
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 YKHVMRGNYE 10
+ HV GN E
Sbjct: 1762 FHHVFEGNKE 1771
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 YKHVMRGNYE 10
+ HV GN E
Sbjct: 1751 FHHVFEGNKE 1760
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 3 HVMRGNY 9
H+MRG +
Sbjct: 2494 HLMRGGW 2500
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YKHVMRG 7
Y+H+ RG
Sbjct: 10 YQHLWRG 16
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 YKHVMRGNYE 10
+ H+ GN E
Sbjct: 1751 FHHIFEGNKE 1760
>sp|VPK2_VACCC|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YKHVMRGNYE 10
++H R NYE
Sbjct: 235 FEHEKRTNYE 244
>sp|VPK2_VACCA|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Ankara) (VACV)
Query: 1 YKHVMRGNYE 10
++H R NYE
Sbjct: 235 FEHEKRTNYE 244
>sp|VPK2_VACCT|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Tian Tan)
Query: 1 YKHVMRGNYE 10
++H R NYE
Sbjct: 235 FEHEKRTNYE 244
>sp|VPK2_VAR67|SERINE/THREONINE-PROTEIN kinase 2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 YKHVMRGNYE 10
++H R NYE
Sbjct: 235 FEHEKRTNYE 244
>sp|VPK2_MONPV|SERINE/THREONINE-PROTEIN kinase 2|Monkeypox virus (MPXV)
Query: 1 YKHVMRGNYE 10
++H R NYE
Sbjct: 235 FEHEKRTNYE 244
26|Sequence|126|135|RGNYETLVSL
>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus
Query: 2 GNYETLV 8
GNYETL+
Sbjct: 237 GNYETLL 243
>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 GNYETLV 8
GNYETL+
Sbjct: 237 GNYETLL 243
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 RGNYET 6
RGNY+T
Sbjct: 1497 RGNYKT 1502
>sp|VU55_HHV6U|UNCHARACTERIZED protein U55|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 RGNYETLVSL 10
RGN +TL S+
Sbjct: 413 RGNPQTLPSV 422
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 1 RGNYETLVSL 10
RG Y+T + L
Sbjct: 244 RGKYKTTLDL 253
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 1 RGNYETLVSL 10
RG Y+T + L
Sbjct: 244 RGKYKTTLDL 253
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 RGNYET 6
RGNY T
Sbjct: 144 RGNYNT 149
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 3 NYETLV 8
NY+TLV
Sbjct: 285 NYDTLV 290
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 NYETLV 8
N+ETLV
Sbjct: 236 NFETLV 241
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 3 NYETLV 8
N+ETLV
Sbjct: 236 NFETLV 241
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 3 NYETLV 8
N+ETLV
Sbjct: 236 NFETLV 241
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 NYETLV 8
N+ETLV
Sbjct: 236 NFETLV 241
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RGNYETLVS 9
+G+Y+TL +
Sbjct: 653 KGHYQTLCT 661
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RGNYETLVS 9
+G+Y+TL +
Sbjct: 653 KGHYQTLCT 661
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 RGNYETLVS 9
+G+Y+TL +
Sbjct: 653 KGHYQTLCT 661
>sp|VE7_HPV44|PROTEIN E7|Human papillomavirus 44
Query: 2 GNYETL 7
GNY TL
Sbjct: 3 GNYTTL 8
>sp|VE7_HPV55|PROTEIN E7|Human papillomavirus type 55
Query: 2 GNYETL 7
GNY TL
Sbjct: 3 GNYPTL 8
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 2 GNYETLVS 9
G YETL +
Sbjct: 358 GQYETLCA 365
27|Sequence|131|140|TLVSLDYAIS
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 VSLDYAI 9
VSLDY I
Sbjct: 1629 VSLDYPI 1635
>sp|PG146_VAR67|PROTEIN OPG146|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 TLVSLDY 7
T VSLDY
Sbjct: 44 TKVSLDY 50
>sp|PG146_VACCC|PROTEIN OPG146|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TLVSLDY 7
T VSLDY
Sbjct: 45 TKVSLDY 51
>sp|PG146_VACCA|PROTEIN OPG146|Vaccinia virus (strain Ankara) (VACV)
Query: 1 TLVSLDY 7
T VSLDY
Sbjct: 45 TKVSLDY 51
>sp|PG146_MONPV|PROTEIN OPG146|Monkeypox virus (MPXV)
Query: 1 TLVSLDY 7
T VSLDY
Sbjct: 45 TKVSLDY 51
28|Sequence|136|145|DYAISKPEVL
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 1 DYAISKPE 8
DY + KPE
Sbjct: 254 DYIVQKPE 261
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 1 DYAISKPEVL 10
DY + PE+L
Sbjct: 193 DYTVWMPEIL 202
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 DYAISKPE 8
D+A+++PE
Sbjct: 1292 DHAVARPE 1299
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 2 YAISKPEV 9
Y+ISKP V
Sbjct: 282 YSISKPAV 289
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 DYAISKPEVL 10
D+AIS+ EV+
Sbjct: 336 DFAISRFEVI 345
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 1 DYAISKPEVL 10
D+AIS+ EV+
Sbjct: 335 DFAISRFEVI 344
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 DYAISKPEVL 10
D +SKP++L
Sbjct: 434 DLEVSKPKIL 443
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 DYAISKPEVL 10
D +SKP++L
Sbjct: 434 DLEVSKPKIL 443
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 DYAISKPEVL 10
D+AIS+ EV+
Sbjct: 336 DFAISRFEVI 345
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 DYAISK 6
DYAISK
Sbjct: 2031 DYAISK 2036
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 DYAISKPEVL 10
D+AIS+ EV+
Sbjct: 336 DFAISRFEVI 345
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 DYAISKP 7
DY++S+P
Sbjct: 481 DYSLSEP 487
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DYAISKP 7
DY++S+P
Sbjct: 481 DYSLSEP 487
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DYAISKP 7
DY++S+P
Sbjct: 481 DYSLSEP 487
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 DYAISKPE 8
DY KPE
Sbjct: 1717 DYVARKPE 1724
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 4 ISKPEVL 10
IS PEVL
Sbjct: 1551 ISSPEVL 1557
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 2 YAISKPEVL 10
YA+ PEV+
Sbjct: 336 YAMRVPEVI 344
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 YAISKPEVL 10
YA+ PEV+
Sbjct: 336 YAMRVPEVI 344
>sp|HEMA_INBYB|HEMAGGLUTININ B virus (strain B/Yamagata/16/1988)
Query: 1 DYAISKP 7
DY + KP
Sbjct: 247 DYMVQKP 253
>sp|HEMA_INBVL|HEMAGGLUTININ B virus (strain B/Victoria/103/1989)
Query: 1 DYAISKP 7
DY + KP
Sbjct: 262 DYMVQKP 268
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 1 DYAISKP 7
DY + KP
Sbjct: 255 DYMVQKP 261
>sp|HEMA_INBSJ|HEMAGGLUTININ B virus (strain B/Singapore/1964)
Query: 1 DYAISKP 7
DY + KP
Sbjct: 259 DYMVQKP 265
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 1 DYAISKP 7
DY + KP
Sbjct: 262 DYMVQKP 268
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 1 DYAISKP 7
DY + KP
Sbjct: 262 DYMVQKP 268
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 1 DYAISKP 7
DY + KP
Sbjct: 263 DYMVQKP 269
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 DYAISKP 7
DY + KP
Sbjct: 254 DYMVQKP 260
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 1 DYAISKP 7
DY + KP
Sbjct: 262 DYMVQKP 268
>sp|HEMA_INBTF|HEMAGGLUTININ B virus (strain B/Texas/4/1990)
Query: 1 DYAISKP 7
DY + KP
Sbjct: 262 DYMVQKP 268
>sp|HEMA_INBP9|HEMAGGLUTININ B virus (strain B/Panama/45/1990)
Query: 1 DYAISKP 7
DY + KP
Sbjct: 262 DYMVQKP 268
>sp|HEMA_INBNY|HEMAGGLUTININ B virus (strain B/New
Query: 1 DYAISKP 7
DY + KP
Sbjct: 262 DYMVQKP 268
>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 ISKPEVL 10
I+KPEV+
Sbjct: 330 ITKPEVI 336
>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 ISKPEVL 10
I+KPEV+
Sbjct: 330 ITKPEVI 336
>sp|HEMA_INBTE|HEMAGGLUTININ B virus (strain B/Texas/1/1991)
Query: 1 DYAISKP 7
DY + KP
Sbjct: 262 DYMVQKP 268
>sp|HEMA_INBHM|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 DYAISKP 7
DY + KP
Sbjct: 262 DYMVQKP 268
>sp|HEMA_INBBK|HEMAGGLUTININ B virus (strain B/Bangkok/163/1990)
Query: 1 DYAISKP 7
DY + KP
Sbjct: 262 DYMVQKP 268
>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 ISKPEVL 10
I+KPEV+
Sbjct: 330 ITKPEVI 336
>sp|HEMA_INBSD|HEMAGGLUTININ B virus (strain B/South
Query: 1 DYAISKP 7
DY + KP
Sbjct: 262 DYMVQKP 268
>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)
Query: 1 DYAISKP 7
DY + KP
Sbjct: 262 DYMVQKP 268
>sp|HEMA_INBHL|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 DYAISKP 7
DY + KP
Sbjct: 262 DYMVQKP 268
>sp|HEMA_INBFU|HEMAGGLUTININ B virus (strain B/Fukuoka/80/1981)
Query: 1 DYAISKP 7
DY + KP
Sbjct: 247 DYMVQKP 253
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 1 DYAISKP 7
DY + KP
Sbjct: 253 DYIVQKP 259
>sp|HEMA_INBGL|HEMAGGLUTININ B virus (strain B/GL/1954)
Query: 1 DYAISKP 7
DY + KP
Sbjct: 257 DYIVQKP 263
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 2 YAISKPEVL 10
Y KPEVL
Sbjct: 1095 YKGDKPEVL 1103
29|Sequence|141|150|KPEVLSQIEQ
>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12
Query: 2 PEVLSQIEQ 10
P+VL+++EQ
Sbjct: 27 PDVLNKVEQ 35
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 KPEVLSQIE 9
KP+V+ QIE
Sbjct: 1720 KPKVVRQIE 1728
>sp|VL2_HPV15|MINOR capsid protein L2|Human papillomavirus 15
Query: 2 PEVLSQIEQ 10
P+VL+++EQ
Sbjct: 27 PDVLNKVEQ 35
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 3 EVLSQIEQ 10
EVLS+I+Q
Sbjct: 45 EVLSEIQQ 52
>sp|UL88_HHV7J|PROTEIN U59|Human herpesvirus 7 (strain JI)
Query: 1 KPEVLSQIEQ 10
KP +L +IE+
Sbjct: 147 KPSILLEIEE 156
>sp|VL2_HPV24|MINOR capsid protein L2|Human papillomavirus 24
Query: 2 PEVLSQIEQ 10
P+V++++EQ
Sbjct: 27 PDVINKVEQ 35
>sp|VL2_HPV38|MINOR capsid protein L2|Human papillomavirus 38
Query: 2 PEVLSQIEQ 10
P+V++++EQ
Sbjct: 27 PDVINKVEQ 35
>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8
Query: 2 PEVLSQIEQ 10
P+V++++EQ
Sbjct: 27 PDVINKVEQ 35
>sp|VL2_HPV23|MINOR capsid protein L2|Human papillomavirus 23
Query: 2 PEVLSQIEQ 10
P+VL+++EQ
Sbjct: 27 PDVLNKVEQ 35
>sp|VL2_HPV07|MINOR capsid protein L2|Human papillomavirus 7
Query: 2 PEVLSQIEQ 10
P+V++++EQ
Sbjct: 29 PDVVNKVEQ 37
30|Sequence|146|155|SQIEQGKEPC
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 IEQGKEP 9
IEQG+EP
Sbjct: 169 IEQGEEP 175
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 IEQGKEP 9
IEQG+EP
Sbjct: 169 IEQGEEP 175
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 3 IEQGKEP 9
I+QG+EP
Sbjct: 169 IDQGEEP 175
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 IEQGKEP 9
I+QG+EP
Sbjct: 169 IDQGEEP 175
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 IEQGKEP 9
I+QG+EP
Sbjct: 169 IDQGEEP 175
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 IEQGKEP 9
I+QG+EP
Sbjct: 169 IDQGEEP 175
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 IEQGKEP 9
I+QG+EP
Sbjct: 169 IDQGEEP 175
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 IEQGKEP 9
I+QG+EP
Sbjct: 169 IDQGEEP 175
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 QIEQGKEPC 10
+EQG+ PC
Sbjct: 495 HLEQGEAPC 503
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 SQIEQGKEPC 10
SQ+E+ PC
Sbjct: 335 SQLEETFGPC 344
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 SQIEQGKEPC 10
SQ+E+ PC
Sbjct: 335 SQLEETFGPC 344
>sp|PG051_VACCC|PROTEIN OPG051|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 IEQGKEPC 10
+E+G+E C
Sbjct: 36 VEEGREGC 43
>sp|NCAP_PI2HT|NUCLEOPROTEIN parainfluenza 2 virus (strain
Query: 1 SQIEQGKEP 9
SQ+ +G++P
Sbjct: 403 SQLPRGRQP 411
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 EQGKEPC 10
+QG +PC
Sbjct: 112 DQGLKPC 118
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 QGKEPC 10
+GK PC
Sbjct: 235 EGKGPC 240
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 QIEQGKEP 9
+EQGK P
Sbjct: 496 HLEQGKAP 503
31|Sequence|151|160|GKEPCNWRRP
>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 KEPCNWR 8
+EPC WR
Sbjct: 197 EEPCAWR 203
>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 KEPCNWR 8
+EPC WR
Sbjct: 197 EEPCAWR 203
>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 KEPCNWR 8
+EPC WR
Sbjct: 197 EEPCAWR 203
>sp|DUT_EBVB9|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 3 EPCNWRR 9
+PC WRR
Sbjct: 182 KPCRWRR 188
>sp|DUT_EBVG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain GD1)
Query: 3 EPCNWRR 9
+PC WRR
Sbjct: 182 KPCRWRR 188
>sp|DUT_EBVA8|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 3 EPCNWRR 9
+PC WRR
Sbjct: 182 KPCRWRR 188
>sp|UNG_HHV6Z|URACIL-DNA glycosylase|Human herpesvirus 6B (strain Z29)
Query: 1 GKEPCNW 7
GK+P NW
Sbjct: 244 GKDPINW 250
>sp|UNG_HHV6U|URACIL-DNA glycosylase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GKEPCNW 7
GK+P NW
Sbjct: 244 GKDPINW 250
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 1 GKEPCN 6
G EPCN
Sbjct: 560 GAEPCN 565
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 1 GKEPCN 6
G EPCN
Sbjct: 560 GAEPCN 565
>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GKEPCNW 7
G EPC W
Sbjct: 127 GSEPCYW 133
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 EPCNWR 8
EP NW+
Sbjct: 1444 EPSNWK 1449
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 2 KEPCNWRR 9
K+P WRR
Sbjct: 476 KKPTVWRR 483
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 4 PCNWR 8
P NWR
Sbjct: 47 PVNWR 51
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain
Query: 4 PCNWR 8
PC WR
Sbjct: 84 PCPWR 88
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 4 PCNWR 8
PC WR
Sbjct: 84 PCPWR 88
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 4 PCNWRR 9
P NW R
Sbjct: 349 PLNWER 354
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 4 PCNWRR 9
P NW R
Sbjct: 341 PLNWER 346
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 4 PCNWRR 9
P NW R
Sbjct: 341 PLNWER 346
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 4 PCNWRR 9
P NW R
Sbjct: 341 PLNWER 346
>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 PCNWRR 9
PC WR+
Sbjct: 257 PCMWRK 262
>sp|UL34_HCMVM|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 KEPCNWRRP 10
K+P N RRP
Sbjct: 300 KKPRNARRP 308
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 1 GKEPCNW 7
G EPC++
Sbjct: 561 GAEPCSF 567
>sp|UL34_HCMVT|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 KEPCNWRRP 10
K+P N RRP
Sbjct: 300 KKPRNARRP 308
>sp|UL34_HCMVA|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 KEPCNWRRP 10
K+P N RRP
Sbjct: 300 KKPRNARRP 308
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 6 NWRRP 10
NW RP
Sbjct: 447 NWMRP 451
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 4 PCNWR 8
PC W+
Sbjct: 132 PCEWK 136
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 4 PCNWRR 9
PC W R
Sbjct: 21 PCLWER 26
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 KEPCNW 7
K+P NW
Sbjct: 1892 KDPKNW 1897
>sp|CEP2_HHV6Z|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6B (strain Z29)
Query: 5 CNWRR 9
CNW R
Sbjct: 22 CNWFR 26
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 CNWRR 9
CNW R
Sbjct: 644 CNWTR 648
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 5 CNWRR 9
CNW R
Sbjct: 644 CNWTR 648
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 CNWRR 9
CNW R
Sbjct: 644 CNWTR 648
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 KEPCNWR 8
K CNWR
Sbjct: 1154 KYHCNWR 1160
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 CNWRR 9
CNW R
Sbjct: 644 CNWTR 648
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 CNWRR 9
CNW R
Sbjct: 644 CNWTR 648
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 CNWRR 9
CNW R
Sbjct: 644 CNWTR 648
>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 CNWRR 9
CNW R
Sbjct: 22 CNWFR 26
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 5 CNWRR 9
CNW R
Sbjct: 645 CNWTR 649
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 5 CNWRR 9
CNW R
Sbjct: 649 CNWTR 653
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 2 KEPCNWRR 9
K+P W R
Sbjct: 475 KKPTTWHR 482
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 5 CNWRR 9
CNW R
Sbjct: 652 CNWTR 656
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 5 CNWRR 9
CNW R
Sbjct: 646 CNWTR 650
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 5 CNWRR 9
CNW R
Sbjct: 642 CNWTR 646
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 CNWRR 9
CNW R
Sbjct: 644 CNWTR 648
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 5 CNWRR 9
CNW R
Sbjct: 648 CNWTR 652
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 5 CNWRR 9
CNW R
Sbjct: 649 CNWTR 653
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 CNWRR 9
CNW R
Sbjct: 644 CNWTR 648
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 5 CNWRR 9
CNW R
Sbjct: 644 CNWTR 648
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 5 CNWRR 9
CNW R
Sbjct: 649 CNWTR 653
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 5 CNWRR 9
CNW R
Sbjct: 650 CNWTR 654
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 5 CNWRR 9
CNW R
Sbjct: 650 CNWTR 654
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 5 CNWRR 9
CNW R
Sbjct: 644 CNWTR 648
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 5 CNWRR 9
CNW R
Sbjct: 645 CNWTR 649
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 5 CNWRR 9
CNW R
Sbjct: 648 CNWTR 652
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 CNWRR 9
CNW R
Sbjct: 644 CNWTR 648
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 5 CNWRR 9
CNW R
Sbjct: 644 CNWTR 648
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 5 CNWRR 9
CNW R
Sbjct: 644 CNWTR 648
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 GKEPC 5
GK PC
Sbjct: 2090 GKSPC 2094
32|Sequence|156|165|NWRRPGPKIP
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 NWRRPGPK 8
NW P PK
Sbjct: 1328 NWSNPSPK 1335
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 NWRRPGPK 8
NW P PK
Sbjct: 1328 NWSNPSPK 1335
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 NWRRPGPK 8
NW P PK
Sbjct: 1328 NWSNPSPK 1335
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 NWRRPGPK 8
NW P PK
Sbjct: 1328 NWSNPSPK 1335
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 NWRRPGPK 8
NW P PK
Sbjct: 1328 NWSNPSPK 1335
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 NWRRPGPK 8
NW P PK
Sbjct: 1164 NWSNPSPK 1171
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 NWRRPGPK 8
NW P PK
Sbjct: 1328 NWSNPSPK 1335
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 NWRRPGPK 8
NW P PK
Sbjct: 1328 NWSNPSPK 1335
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 NWRRPGPK 8
NW P PK
Sbjct: 1328 NWSNPSPK 1335
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 NWRRPGPK 8
NW P PK
Sbjct: 1328 NWSNPSPK 1335
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 WRRPGPKIP 10
W R P IP
Sbjct: 2063 WTRTSPNIP 2071
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 WRRPGPKIP 10
W R P IP
Sbjct: 2063 WTRTSPNIP 2071
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 WRRPGPKIP 10
W R P IP
Sbjct: 2063 WTRTSPNIP 2071
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 WRRPGPKIP 10
W R P IP
Sbjct: 2063 WTRTSPNIP 2071
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 WRRPGPKIP 10
W R P IP
Sbjct: 2063 WARTSPNIP 2071
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 WRRPGPKIP 10
W+RPG + P
Sbjct: 2301 WKRPGYEPP 2309
>sp|VP24_EBORR|MEMBRANE-ASSOCIATED protein VP24|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 NWRRPGP 7
N +RPGP
Sbjct: 210 NSKRPGP 216
>sp|VP24_EBORE|MEMBRANE-ASSOCIATED protein VP24|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 NWRRPGP 7
N +RPGP
Sbjct: 210 NSKRPGP 216
>sp|UL04_HCMVT|EARLY glycoprotein GP48|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 WRRPGPKIP 10
W+ P +IP
Sbjct: 34 WKSPNRQIP 42
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 6 GPKIP 10
GPKIP
Sbjct: 441 GPKIP 445
>sp|UL04_HCMVM|ENVELOPE glycoprotein UL4|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 WRRPGPKIP 10
W+ P +IP
Sbjct: 36 WKSPDRQIP 44
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 5 PGPKI 9
PGPKI
Sbjct: 388 PGPKI 392
>sp|UL04_HCMVA|EARLY glycoprotein GP48|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 WRRPGPKIP 10
W+ P +IP
Sbjct: 38 WKSPDRQIP 46
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 2 WRRPG 6
W+RPG
Sbjct: 137 WQRPG 141
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 2 WRRPG 6
W+RPG
Sbjct: 137 WQRPG 141
>sp|GCVK_HHV7J|PROBABLE ganciclovir kinase|Human herpesvirus 7 (strain JI)
Query: 4 RPGPKIP 10
RP KIP
Sbjct: 44 RPNKKIP 50
>sp|VP24_EBOG4|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 NWRRPGP 7
N ++PGP
Sbjct: 210 NRKKPGP 216
>sp|VP24_EBOZ5|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 NWRRPGP 7
N ++PGP
Sbjct: 210 NRKKPGP 216
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 NWRRPGPKIP 10
+WRRP + P
Sbjct: 2300 SWRRPDYQPP 2309
>sp|UL34_HCMVM|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NWRRPGPKIP 10
N RRP ++P
Sbjct: 304 NARRPRTRVP 313
>sp|UL34_HCMVT|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 NWRRPGPKIP 10
N RRP ++P
Sbjct: 304 NARRPRTRVP 313
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 2 WRRPG 6
WR PG
Sbjct: 428 WRHPG 432
>sp|UL34_HCMVA|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NWRRPGPKIP 10
N RRP ++P
Sbjct: 304 NARRPRTRVP 313
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 WRRPGPKIP 10
W RPG P
Sbjct: 667 WTRPGGAPP 675
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 WRRPGPKIP 10
W RPG P
Sbjct: 667 WTRPGGAPP 675
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 WRRPGPKIP 10
W RPG P
Sbjct: 667 WTRPGGAPP 675
>sp|PB2S1_I96A0|PB2-S1 A virus (strain A/Goose/Guangdong/1/1996
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2S1_I33A0|PB2-S1 A virus (strain A/Wilson-Smith/1933
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea
Query: 2 WRRPGP 7
W R GP
Sbjct: 91 WNRNGP 96
>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 2 WRRPGP 7
W R GP
Sbjct: 98 WNRNGP 103
>sp|PB2S1_I34A1|PB2-S1 A virus (strain A/Puerto
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2S1_I18A0|PB2-S1 A virus (strain A/Brevig
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 WRRPGP 7
W R GP
Sbjct: 93 WNRNGP 98
>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 2 WRRPGP 7
W R GP
Sbjct: 92 WNRNGP 97
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New
Query: 2 WRRPGP 7
W R GP
Sbjct: 99 WNRNGP 104
33|Sequence|161|170|GPKIPDVPVD
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 GPKIPDVP 8
G +IPDVP
Sbjct: 2847 GARIPDVP 2854
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 GPKIPDVP 8
G +IPDVP
Sbjct: 2847 GARIPDVP 2854
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 1 GPKIPDVPVD 10
GP+I D PV+
Sbjct: 513 GPQISDQPVE 522
>sp|UL24_HHV6Z|PROTEIN UL24 homolog|Human herpesvirus 6B (strain Z29)
Query: 1 GPKIPDVPV 9
GP+IPD V
Sbjct: 61 GPRIPDCIV 69
>sp|UL24_HHV6U|PROTEIN UL24 homolog|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GPKIPDVPV 9
GP+IPD V
Sbjct: 61 GPRIPDCIV 69
>sp|UL24_HHV6G|PROTEIN UL24 homolog|Human herpesvirus 6A (strain GS)
Query: 1 GPKIPDVPV 9
GP+IPD V
Sbjct: 61 GPRIPDCIV 69
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GPKIPDVPVD 10
GP +P +PVD
Sbjct: 10 GPPLPVLPVD 19
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GPKIPDVPVD 10
GP +P +PVD
Sbjct: 10 GPPLPVLPVD 19
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 5 PDVPVD 10
PD+PV+
Sbjct: 308 PDIPVN 313
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 3 KIPDVP 8
+IPD+P
Sbjct: 320 RIPDLP 325
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 5 PDVPVD 10
PD+PV+
Sbjct: 308 PDIPVN 313
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 5 PDVPVD 10
PD+PV+
Sbjct: 308 PDIPVN 313
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 5 PDVPVD 10
PD+PV+
Sbjct: 308 PDIPVN 313
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 PKIPDVPV 9
PKI VPV
Sbjct: 2156 PKIRSVPV 2163
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 3 KIPDVP 8
++PD+P
Sbjct: 15 QVPDIP 20
>sp|B17_VACCC|PROTEIN B17|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 KIPDVPVD 10
+IP P+D
Sbjct: 234 RIPPFPID 241
>sp|B17_VARV|PROTEIN B17|Variola virus
Query: 3 KIPDVPVD 10
+IP P+D
Sbjct: 234 RIPPFPID 241
>sp|B17_VAR67|PROTEIN B17|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 KIPDVPVD 10
+IP P+D
Sbjct: 234 RIPPFPID 241
>sp|VIL6_HHV8P|VIRAL interleukin-6 homolog|Human herpesvirus 8 type P
Query: 3 KIPDVP 8
K+PD P
Sbjct: 23 KLPDAP 28
>sp|VP40_EBOZM|MATRIX protein VP40|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 GPKIPDVPV 9
GP IPD P+
Sbjct: 139 GPGIPDHPL 147
>sp|VP40_EBOZ5|MATRIX protein VP40|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 GPKIPDVPV 9
GP IPD P+
Sbjct: 139 GPGIPDHPL 147
>sp|VP40_EBOG4|MATRIX protein VP40|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 GPKIPDVPV 9
GP IPD P+
Sbjct: 139 GPGIPDHPL 147
>sp|VP40_EBORR|MATRIX protein VP40|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 GPKIPDVPV 9
GP IPD P+
Sbjct: 139 GPGIPDHPL 147
>sp|VP40_EBORE|MATRIX protein VP40|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 GPKIPDVPV 9
GP IPD P+
Sbjct: 139 GPGIPDHPL 147
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 1 GPKIPDVPV 9
GP PD+P+
Sbjct: 97 GPPTPDIPL 105
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 2 PKIPDV 7
PK PD+
Sbjct: 77 PKFPDI 82
34|Sequence|166|175|DVPVDPSPGS
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DPSP
Sbjct: 71 VPTDPSP 77
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DPSP
Sbjct: 74 VPTDPSP 80
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DPSP
Sbjct: 74 VPTDPSP 80
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DPSP
Sbjct: 74 VPSDPSP 80
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 75 VPTDPTP 81
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 66 VPTDPNP 72
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 64 VPTDPNP 70
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 71 VPTDPNP 77
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 71 VPTDPNP 77
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 76 VPTDPNP 82
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 76 VPTDPNP 82
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 75 VPTDPNP 81
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 75 VPTDPNP 81
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 80 VPTDPNP 86
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 75 VPTDPNP 81
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 75 VPTDPNP 81
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 75 VPTDPNP 81
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 75 VPTDPNP 81
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 75 VPTDPNP 81
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 75 VPTDPNP 81
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP DP+P
Sbjct: 71 VPTDPNP 77
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 VPVDPSPGS 10
+PV P+P S
Sbjct: 19 IPVHPTPAS 27
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 VPVDPSPGS 10
+PV P+P S
Sbjct: 19 IPVHPTPAS 27
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 VPVDPSPGS 10
+PV P+P S
Sbjct: 19 IPVHPTPAS 27
>sp|VL2_HPV50|MINOR capsid protein L2|Human papillomavirus type 50
Query: 2 VPVDPSPGS 10
VPVDPS S
Sbjct: 100 VPVDPSAAS 108
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 1 DVPVDP 6
+VPVDP
Sbjct: 280 NVPVDP 285
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 VPVDP 6
VPVDP
Sbjct: 1673 VPVDP 1677
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 2 VPVDP 6
VPVDP
Sbjct: 1674 VPVDP 1678
>sp|FUS_MUMPZ|FUSION glycoprotein F0|Mumps virus genotype N (strain
Query: 6 PSPGS 10
PSPGS
Sbjct: 93 PSPGS 97
>sp|FUS_MUMPS|FUSION glycoprotein F0|Mumps virus (strain SBL) (MuV)
Query: 6 PSPGS 10
PSPGS
Sbjct: 93 PSPGS 97
>sp|FUS_MUMPR|FUSION glycoprotein F0|Mumps virus (strain RW) (MuV)
Query: 6 PSPGS 10
PSPGS
Sbjct: 93 PSPGS 97
>sp|FUS_MUMPK|FUSION glycoprotein F0|Mumps virus (strain Kilham) (MuV)
Query: 6 PSPGS 10
PSPGS
Sbjct: 93 PSPGS 97
>sp|FUS_MUMP1|FUSION glycoprotein F0|Mumps virus (strain SBL-1) (MuV)
Query: 6 PSPGS 10
PSPGS
Sbjct: 93 PSPGS 97
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 VPVDPSPGS 10
VPV+P P S
Sbjct: 204 VPVNPEPVS 212
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 VPVDPSPGS 10
VP+D PGS
Sbjct: 298 VPLDYCPGS 306
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 VPVDPSPGS 10
VP+D PGS
Sbjct: 298 VPLDYCPGS 306
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP +P+P
Sbjct: 74 VPTNPNP 80
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPVDPSP 8
VP +P+P
Sbjct: 76 VPTNPNP 82
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 VPVDPSPG 9
V +DPSPG
Sbjct: 91 VLIDPSPG 98
>sp|NEF_HV1S9|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 VPVDPS 7
VPVDPS
Sbjct: 144 VPVDPS 149
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 VPVDPSPG 9
V +DPSPG
Sbjct: 91 VLIDPSPG 98
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 VPVDPSPG 9
V +DPSPG
Sbjct: 91 VLIDPSPG 98
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 VPVDPSPG 9
V +DPSPG
Sbjct: 91 VLIDPSPG 98
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 VPVDPSPG 9
V +DPSPG
Sbjct: 91 VLIDPSPG 98
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 VPVDPSPG 9
V +DPSPG
Sbjct: 91 VLIDPSPG 98
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 VPVDPSPG 9
V +DPSPG
Sbjct: 91 VLIDPSPG 98
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 VPVDPSPG 9
V +DPSPG
Sbjct: 91 VLIDPSPG 98
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 VPVDPSPG 9
V +DPSPG
Sbjct: 91 VLIDPSPG 98
>sp|NEF_HV1S2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 VPVDPS 7
VPVDPS
Sbjct: 143 VPVDPS 148
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 VPVDP 6
VP+DP
Sbjct: 1674 VPIDP 1678
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 VPVDP 6
VP+DP
Sbjct: 1674 VPIDP 1678
>sp|KBZIP_HHV8P|E3 SUMO-protein ligase K-bZIP|Human herpesvirus 8 type P
Query: 1 DVPVDPSPGS 10
D+P SPG+
Sbjct: 6 DIPTKSSPGT 15
>sp|NEF_HV1ET|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 VPVDPS 7
VPVDPS
Sbjct: 147 VPVDPS 152
>sp|E1A_ADE07|EARLY E1A protein|Human adenovirus B serotype 7
Query: 2 VPVDPSPGS 10
+PV P PG
Sbjct: 225 IPVKPKPGK 233
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VPVDP 6
+PVDP
Sbjct: 324 IPVDP 328
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VPVDP 6
+PVDP
Sbjct: 324 IPVDP 328
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VPVDP 6
+PVDP
Sbjct: 324 IPVDP 328
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VPVDP 6
+PVDP
Sbjct: 324 IPVDP 328
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VPVDP 6
+PVDP
Sbjct: 324 IPVDP 328
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VPVDP 6
+PVDP
Sbjct: 324 IPVDP 328
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VPVDP 6
+PVDP
Sbjct: 324 IPVDP 328
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VPVDP 6
+PVDP
Sbjct: 324 IPVDP 328
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VPVDP 6
+PVDP
Sbjct: 324 IPVDP 328
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VPVDP 6
+PVDP
Sbjct: 324 IPVDP 328
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 3 PVDPSP 8
PV+P P
Sbjct: 14 PVEPEP 19
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 3 PVDPSP 8
PV+P P
Sbjct: 14 PVEPEP 19
>sp|NEF_HV1U4|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 VPVDPS 7
VPVDP+
Sbjct: 146 VPVDPA 151
35|Sequence|171|180|PSPGSGPPVP
>sp|NEC2_HHV6Z|NUCLEAR egress protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 PSPGSGPPV 9
P+P SGP V
Sbjct: 268 PTPASGPVV 276
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 1 PSPGSGPPV 9
P+PGS PP+
Sbjct: 180 PNPGSCPPI 188
>sp|MATRX_RABVN|MATRIX protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 PSPGSGPP 8
PSP S PP
Sbjct: 19 PSPASAPP 26
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 SPGSGPPV 9
+PGSG PV
Sbjct: 4618 TPGSGVPV 4625
>sp|MATRX_RABVH|MATRIX protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 PSPGSGPP 8
PSP S PP
Sbjct: 19 PSPASAPP 26
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 PSPGSGPPV 9
P PGS PP+
Sbjct: 182 PPPGSCPPI 190
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 2 SPGSGP 7
+PGSGP
Sbjct: 560 APGSGP 565
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 1 PSPGSGPPV 9
P PGS PP+
Sbjct: 182 PPPGSCPPI 190
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PSPGSGPPVP 10
PSP G P P
Sbjct: 660 PSPSWGLPDP 669
>sp|MATRX_RABVD|MATRIX protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 PSPGSGPP 8
PSP S PP
Sbjct: 19 PSPVSAPP 26
>sp|MATRX_RABVA|MATRIX protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 PSPGSGPP 8
PSP S PP
Sbjct: 19 PSPVSAPP 26
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 3 PGSGP 7
PGSGP
Sbjct: 934 PGSGP 938
>sp|MATRX_RABVR|MATRIX protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 PSPGSGPP 8
PSP S PP
Sbjct: 19 PSPVSAPP 26
>sp|MATRX_RABVC|MATRIX protein|Rabies virus (strain CVS-11) (RABV)
Query: 1 PSPGSGPP 8
PSP S PP
Sbjct: 19 PSPVSAPP 26
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 SPGSGPPVP 10
S S PPVP
Sbjct: 1813 STASAPPVP 1821
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 PGSGPPV 9
PG+ PP+
Sbjct: 1622 PGTCPPI 1628
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 PGSGPPV 9
PG+ PP+
Sbjct: 1622 PGTCPPI 1628
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 PGSGPPV 9
PG+ PP+
Sbjct: 1622 PGACPPI 1628
>sp|BLRF2_EBVG|TEGUMENT protein BLRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PSPGSG 6
PSPG G
Sbjct: 126 PSPGEG 131
>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 SGPPVP 10
S PP+P
Sbjct: 73 SSPPIP 78
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 5 SGPPVP 10
S PP+P
Sbjct: 73 SSPPIP 78
>sp|PG056_VACCC|PROTEIN OPG056|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 SGPPVP 10
S PP+P
Sbjct: 73 SSPPIP 78
>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)
Query: 5 SGPPVP 10
S PP+P
Sbjct: 73 SSPPIP 78
>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)
Query: 5 SGPPVP 10
S PP+P
Sbjct: 72 SSPPIP 77
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 PGSGPPVP 10
PG G P P
Sbjct: 1816 PGRGDPFP 1823
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 PGSGPPVP 10
PG G P P
Sbjct: 1816 PGRGDPFP 1823
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 SGPPVP 10
SGPP+P
Sbjct: 9 SGPPLP 14
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 SGPPVP 10
SGPP+P
Sbjct: 9 SGPPLP 14
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 3 PGSGPPV 9
P S PP+
Sbjct: 1212 PASNPPI 1218
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 3 PGSGPPV 9
P S PP+
Sbjct: 1212 PASNPPI 1218
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PSPGSGPP 8
PSP PP
Sbjct: 625 PSPWQEPP 632
>sp|BLRF2_EBVB9|TEGUMENT protein BLRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PSPGSG 6
PSPG G
Sbjct: 126 PSPGEG 131
>sp|BLRF2_EBVA8|TEGUMENT protein BLRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PSPGSG 6
PSPG G
Sbjct: 126 PSPGEG 131
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 SPGSGPPV 9
+PG G P+
Sbjct: 4595 APGCGVPI 4602
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 SPGSGPP 8
SPG PP
Sbjct: 419 SPGDSPP 425
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SPGSGPP 8
SPG PP
Sbjct: 419 SPGDSPP 425
>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)
Query: 1 PSPGSGP 7
PSP +GP
Sbjct: 130 PSPTAGP 136
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 SGPPVP 10
S PPVP
Sbjct: 252 SNPPVP 257
>sp|VE4_HPV5B|PROTEIN E4|Human papillomavirus type 5b
Query: 2 SPGSGPPVP 10
PG GP VP
Sbjct: 119 DPGEGPQVP 127
>sp|NSS_TOSV|NON-STRUCTURAL protein NS-S|Toscana virus (Tos)
Query: 1 PSPGSGPPV 9
PSP PP+
Sbjct: 308 PSPPHYPPL 316
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 PGSGPPVP 10
PG PVP
Sbjct: 2598 PGHEEPVP 2605
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PGSGPPVP 10
PGS P P
Sbjct: 1794 PGSRDPFP 1801
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 PGSGPPVP 10
PG PVP
Sbjct: 2598 PGHEEPVP 2605
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 PGSGPPVP 10
PG PVP
Sbjct: 2598 PGHEEPVP 2605
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PGSGPPVP 10
PGS P P
Sbjct: 1794 PGSRDPFP 1801
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PGSGPPVP 10
PGS P P
Sbjct: 1794 PGSRDPFP 1801
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PGSGPPVP 10
PGS P P
Sbjct: 1794 PGSRDPFP 1801
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 PGSGPPVP 10
PG PVP
Sbjct: 2598 PGHEEPVP 2605
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PGSGPPVP 10
PGS P P
Sbjct: 1794 PGSRDPFP 1801
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 PGSGPPVP 10
PGS P P
Sbjct: 1794 PGSRDPFP 1801
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PGSGPPVP 10
PGS P P
Sbjct: 1794 PGSRDPFP 1801
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 PGSGPPVP 10
PG PVP
Sbjct: 2598 PGHEEPVP 2605
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 SGPPVP 10
S PPVP
Sbjct: 248 SNPPVP 253
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PSPGSG 6
PSPGSG
Sbjct: 811 PSPGSG 816
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PSPGSG 6
PSPGSG
Sbjct: 803 PSPGSG 808
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 PGSGPPVP 10
PGS P P
Sbjct: 1823 PGSDNPFP 1830
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 PGSGPP 8
PG+ PP
Sbjct: 467 PGANPP 472
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 SPGSGP 7
+PG+GP
Sbjct: 325 NPGTGP 330
36|Sequence|176|185|GPPVPAPDLL
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 3 PVPAPDL 9
PVP PDL
Sbjct: 169 PVPGPDL 175
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 2 PPVPAP 7
PPVP+P
Sbjct: 51 PPVPSP 56
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 2 PPVPAP 7
PPVP+P
Sbjct: 51 PPVPSP 56
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 4 VPAPDLL 10
+PAP+LL
Sbjct: 698 IPAPNLL 704
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 GPPVPAP 7
PPVP P
Sbjct: 1817 APPVPKP 1823
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 PPVPAP 7
PPVP P
Sbjct: 1837 PPVPKP 1842
Query: 2 PPVPAP 7
PP+P P
Sbjct: 1772 PPIPKP 1777
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 PPVPAPDL 9
PPVPA DL
Sbjct: 2776 PPVPAYDL 2783
Query: 1 GPPVPAP 7
GP VPAP
Sbjct: 2069 GPSVPAP 2075
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 PPVPAPDL 9
PPVPA DL
Sbjct: 2776 PPVPAYDL 2783
Query: 1 GPPVPAP 7
GP VPAP
Sbjct: 2069 GPSVPAP 2075
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 PPVPAPD 8
PPV PD
Sbjct: 417 PPVTLPD 423
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPVPAPDL 9
PPVP D+
Sbjct: 252 PPVPVGDI 259
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 PPVPAPDLL 10
P PAPD +
Sbjct: 1457 PETPAPDAI 1465
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPVPAPDL 9
PPVP D+
Sbjct: 256 PPVPVGDI 263
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPVPAPDL 9
PPVP D+
Sbjct: 250 PPVPVGDI 257
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 PPVPAP 7
PP PAP
Sbjct: 1790 PPQPAP 1795
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PPVPAPDL 9
PPVP D+
Sbjct: 252 PPVPVGDI 259
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 PPVPAP 7
PP PAP
Sbjct: 1798 PPHPAP 1803
>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPVPAPDL 9
PPVP D+
Sbjct: 252 PPVPVGDI 259
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 PPVPAP 7
PP PAP
Sbjct: 1798 PPHPAP 1803
>sp|GAG_SFV3L|GAG polyprotein|Simian foamy virus type 3
Query: 2 PPVPAPDLL 10
PPVPAP +
Sbjct: 279 PPVPAPQAI 287
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 GPPVPAPD 8
G PVP PD
Sbjct: 1688 GKPVPLPD 1695
Query: 1 GPPVPAPD 8
GP VP P+
Sbjct: 2066 GPSVPVPE 2073
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 PPVPAP 7
PP P+P
Sbjct: 295 PPTPSP 300
>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPVPAPDL 9
PPVP D+
Sbjct: 256 PPVPVGDI 263
>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPVPAPDL 9
PPVP D+
Sbjct: 250 PPVPVGDI 257
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 GPPVPAPD 8
G P+PAP+
Sbjct: 2070 GVPIPAPN 2077
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 1 GPPVPAPDLL 10
PP PA DL+
Sbjct: 973 APPSPAADLV 982
>sp|GAG_HV1ET|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPVPAPDL 9
PPVP D+
Sbjct: 252 PPVPVGDI 259
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 GPPVPAPD 8
G P+PA D
Sbjct: 2359 GKPLPADD 2366
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 2 PPVPAPDL 9
PPV P L
Sbjct: 156 PPVQQPQL 163
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 3 PVPAPD 8
PVP PD
Sbjct: 204 PVPKPD 209
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 3 PVPAPD 8
PVP PD
Sbjct: 204 PVPKPD 209
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 GPPVPAPD 8
G P+PA D
Sbjct: 2389 GKPLPADD 2396
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 GPPVPAPD 8
G P+PA D
Sbjct: 2389 GKPLPADD 2396
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 PPVPAP 7
PP+P P
Sbjct: 253 PPLPDP 258
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 PPVPAP 7
PP+P P
Sbjct: 253 PPLPDP 258
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 PPVPAP 7
PP+P P
Sbjct: 253 PPLPDP 258
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 PVPAPD 8
PVP PD
Sbjct: 204 PVPKPD 209
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 GPPVPAPD 8
G P+PA D
Sbjct: 2402 GKPLPAGD 2409
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 GPPVPAP 7
PP PAP
Sbjct: 181 APPTPAP 187
37|Sequence|181|190|APDLLMQIKQ
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 APDLLMQIKQ 10
+PDL+MQ+ +
Sbjct: 1977 SPDLVMQLHK 1986
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 APDLLMQIKQ 10
+PDL+MQ+ +
Sbjct: 1985 SPDLVMQLHK 1994
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 APDLLMQIKQ 10
+PDL+MQ+ +
Sbjct: 1976 SPDLVMQLHK 1985
>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)
Query: 2 PDLLMQIKQ 10
PD L++IK+
Sbjct: 105 PDSLVEIKR 113
>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)
Query: 2 PDLLMQIKQ 10
PD L++IK+
Sbjct: 105 PDSLVEIKR 113
>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 2 PDLLMQIKQ 10
PD L++IK+
Sbjct: 105 PDSLVEIKR 113
>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)
Query: 2 PDLLMQIKQ 10
PD L++IK+
Sbjct: 105 PDSLVEIKR 113
38|Sequence|186|195|MQIKQEGELQ
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 QIKQEGEL 9
+IKQEG L
Sbjct: 546 EIKQEGRL 553
39|Sequence|191|200|EGELQLQEQQ
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 EGELQLQE 8
+GEL+L+E
Sbjct: 76 KGELKLEE 83
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 EGELQLQEQQ 10
+GE +QEQ+
Sbjct: 28 DGEANIQEQR 37
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 EGELQLQEQQ 10
+GE +QEQ+
Sbjct: 28 DGEANIQEQR 37
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 1 EGELQLQEQ 9
EG QL++Q
Sbjct: 151 EGSTQLEKQ 159
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 1 EGELQL 6
EGELQ+
Sbjct: 875 EGELQI 880
40|Sequence|196|205|LQEQQALGVE
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 587 LKDQQLLGI 595
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 581 LKDQQLLGI 589
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 579 LKDQQLLGI 587
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 574 LKDQQLLGI 582
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 583 LKDQQLLGI 591
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 578 LRDQQLLGI 586
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 573 LKDQQLLGI 581
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 594 LKDQQLLGI 602
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 587 LKDQQLLGI 595
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 563 LKDQQLLGI 571
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 585 LKDQQLLGI 593
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 576 LRDQQLLGI 584
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 587 LRDQQLLGI 595
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 583 LRDQQLLGI 591
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 580 LRDQQLLGI 588
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 586 LKDQQLLGI 594
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 590 LKDQQLLGI 598
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 581 LKDQQLLGI 589
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 587 LKDQQLLGI 595
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 587 LKDQQLLGI 595
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 587 LRDQQLLGI 595
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 587 LKDQQLLGI 595
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 582 LKDQQLLGI 590
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 575 LRDQQLLGI 583
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 584 LKDQQLLGI 592
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 578 LKDQQLLGI 586
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 584 LKDQQLLGI 592
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 586 LKDQQLLGI 594
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 592 LKDQQLLGI 600
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 573 LKDQQLLGI 581
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 598 LKDQQLLGI 606
>sp|NS1_INBLE|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Lee/1940)
Query: 1 LQEQQALGVE 10
L+E++A+GV+
Sbjct: 74 LEERKAIGVK 83
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 596 LRDQQLLGI 604
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 577 LRDQQLLGI 585
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 586 LRDQQLLGI 594
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 582 LRDQQLLGI 590
>sp|NS1_INBHT|NON-STRUCTURAL protein 1|Influenza B virus (strain B/HT/1984)
Query: 1 LQEQQALGVE 10
L+E++A+GV+
Sbjct: 74 LEERKAIGVK 83
>sp|NS1_INBHK|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Hong
Query: 1 LQEQQALGVE 10
L+E++A+GV+
Sbjct: 74 LEERKAIGVK 83
>sp|NS1_INBBA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/BA/1978)
Query: 1 LQEQQALGVE 10
L+E++A+GV+
Sbjct: 74 LEERKAIGVK 83
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 2 QEQQALGV 9
+EQ+ LGV
Sbjct: 907 EEQKTLGV 914
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 574 LRDQQLLGI 582
>sp|NS1_INBSJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/1964)
Query: 1 LQEQQALGVE 10
L+E++A+GV+
Sbjct: 74 LEERKAIGVK 83
>sp|NS1_INBYA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Yamagata/1/1973)
Query: 1 LQEQQALGVE 10
L+E++A+GV+
Sbjct: 74 LEERKAIGVK 83
>sp|NS1_INBVJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Victoria/1987)
Query: 1 LQEQQALGVE 10
L+E++A+GV+
Sbjct: 74 LEERKAIGVK 83
>sp|NS1_INBMD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Maryland/1959)
Query: 1 LQEQQALGVE 10
L+E++A+GV+
Sbjct: 74 LEERKAIGVK 83
>sp|NS1_INBRU|NON-STRUCTURAL protein 1|Influenza B virus (strain B/RU/1969)
Query: 1 LQEQQALGVE 10
L+E++A+GV+
Sbjct: 74 LEERKAIGVK 83
>sp|NS1_INBAD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Ann
Query: 1 LQEQQALGVE 10
L+E++A+GV+
Sbjct: 74 LEERKAIGVK 83
>sp|NS1_INBAC|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Ann
Query: 1 LQEQQALGVE 10
L+E++A+GV+
Sbjct: 74 LEERKAIGVK 83
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 2 QEQQALGV 9
+EQ+ LGV
Sbjct: 907 EEQKTLGV 914
>sp|NS1_INBSI|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/222/1979)
Query: 1 LQEQQALGVE 10
L+E++A+GV+
Sbjct: 74 LEERKAIGVK 83
>sp|NS1_INBPA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/PA/1979)
Query: 1 LQEQQALGVE 10
L+E++A+GV+
Sbjct: 74 LEERKAIGVK 83
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ +G+
Sbjct: 584 LRDQQLMGI 592
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ +G+
Sbjct: 593 LKDQQLMGI 601
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
L++QQ LG+
Sbjct: 577 LKDQQLLGL 585
>sp|NS1_INB|NON-STRUCTURAL protein 1|Influenza B virus (strain B/ID/1986)
Query: 1 LQEQQALGVE 10
L+E++A+G++
Sbjct: 74 LEERKAIGIK 83
>sp|NS1_INBGA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GA/1986)
Query: 1 LQEQQALGVE 10
L+E++A+G++
Sbjct: 74 LEERKAIGIK 83
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LQEQQALGV 9
LQ+Q+ LG+
Sbjct: 589 LQDQRLLGM 597
41|Sequence|201|210|ALGVEAWAAG
>sp|BALF1_EBVG|APOPTOSIS regulator BALF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 VEAWAA 9
VEAW A
Sbjct: 54 VEAWVA 59
>sp|BALF1_EBVB9|APOPTOSIS regulator BALF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 VEAWAA 9
VEAW A
Sbjct: 54 VEAWVA 59
>sp|UL40_HCMVM|PROTEIN UL40|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LGVEAWA 8
G+E WA
Sbjct: 178 FGLETWA 184
>sp|UL40_HCMVA|PROTEIN UL40|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LGVEAWA 8
G+E WA
Sbjct: 178 FGLETWA 184
>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)
Query: 1 ALGVEAW 7
ALG E W
Sbjct: 241 ALGGETW 247
>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 ALGVEAW 7
ALG E W
Sbjct: 241 ALGGETW 247
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 1 ALGVEAW 7
ALG E W
Sbjct: 241 ALGGETW 247
>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann
Query: 1 ALGVEAW 7
ALG E W
Sbjct: 241 ALGGETW 247
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GVEAWAAG 10
V+ W+AG
Sbjct: 262 AVDIWSAG 269
>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)
Query: 4 VEAWAAG 10
V+ W+AG
Sbjct: 363 VDIWSAG 369
42|Sequence|206|215|AWAAGQPDIG
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 4 AGQPDIG 10
AG PD+G
Sbjct: 944 AGNPDLG 950
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 4 AGQPDIG 10
AG PD+G
Sbjct: 944 AGNPDLG 950
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 4 AGQPDIG 10
AG PD+G
Sbjct: 944 AGNPDLG 950
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 4 AGQPDIG 10
AG PD+G
Sbjct: 944 AGNPDLG 950
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 4 AGQPDIG 10
AG PD+G
Sbjct: 944 AGNPDLG 950
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 4 AGQPDIG 10
AG PD+G
Sbjct: 944 AGNPDLG 950
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 4 AGQPDIG 10
AG PD+G
Sbjct: 944 AGNPDLG 950
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 4 AGQPDIG 10
AG PD+G
Sbjct: 944 AGNPDLG 950
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 4 AGQPDIG 10
AG PD+G
Sbjct: 945 AGNPDLG 951
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 4 AGQPDIG 10
AG PD+G
Sbjct: 944 AGNPDLG 950
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 4 AGQPDIG 10
AG PD+G
Sbjct: 944 AGNPDLG 950
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 4 AGQPDIG 10
AG PD+G
Sbjct: 945 AGNPDLG 951
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 AWAAGQPDI 9
AW G+P +
Sbjct: 1704 AWVLGEPKM 1712
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 AWAAGQP 7
AW G+P
Sbjct: 1703 AWVLGEP 1709
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 4 AGQPDIG 10
AG P+IG
Sbjct: 775 AGAPEIG 781
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 4 AGQPDIG 10
AG P+IG
Sbjct: 777 AGAPEIG 783
>sp|NSS_SFTSV|NON-STRUCTURAL protein NS-S|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 2 WAAGQPDI 9
W +G+P +
Sbjct: 101 WPSGKPSV 108
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 WAAGQP 7
W AG+P
Sbjct: 1807 WLAGRP 1812
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 1 AWAAGQPD 8
+WA PD
Sbjct: 760 SWACNPPD 767
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 1 AWAAGQPD 8
+WA PD
Sbjct: 761 SWACNPPD 768
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 1 AWAAGQPD 8
+WA PD
Sbjct: 760 SWACNPPD 767
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 1 AWAAGQPD 8
+WA PD
Sbjct: 760 SWACNPPD 767
>sp|NSS_HTRV|NON-STRUCTURAL protein NS-S|Heartland virus (HTRV)
Query: 2 WAAGQPDI 9
W +G+P +
Sbjct: 101 WPSGKPSV 108
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 WAAGQ 6
WA+GQ
Sbjct: 1115 WASGQ 1119
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 2 WAAGQPDI 9
W A PD+
Sbjct: 826 WEAEYPDV 833
>sp|VL2_HPV50|MINOR capsid protein L2|Human papillomavirus type 50
Query: 5 GQPDIG 10
G PD+G
Sbjct: 115 GAPDVG 120
>sp|NSS_RVFVZ|NON-STRUCTURAL protein S|Rift valley fever virus (strain
Query: 1 AWAAGQPDIG 10
+W G+P +
Sbjct: 112 SWPLGEPSLA 121
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AWAAGQPDI 9
AW G P I
Sbjct: 250 AWMTGNPPI 258
>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 AWAAGQPDI 9
AW G P I
Sbjct: 250 AWMTGNPPI 258
43|Sequence|211|220|QPDIGEEPWG
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 2 PDIGEEPW 9
P+IG PW
Sbjct: 231 PNIGSRPW 238
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 PDIGEEPW 9
P+IG PW
Sbjct: 231 PNIGSRPW 238
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 2 PDIGEEPW 9
P+IG PW
Sbjct: 231 PNIGSRPW 238
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 2 PDIGEEPW 9
P+IG PW
Sbjct: 231 PNIGSRPW 238
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 2 PDIGEEPW 9
P+IG PW
Sbjct: 231 PNIGSRPW 238
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 2 PDIGEEPW 9
P+IG PW
Sbjct: 231 PNIGSRPW 238
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 2 PDIGEEPW 9
P+IG PW
Sbjct: 231 PNIGSRPW 238
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 PDIGEEPW 9
P+IG PW
Sbjct: 231 PNIGSRPW 238
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 2 PDIGEEPW 9
P+IG PW
Sbjct: 231 PNIGSRPW 238
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 2 PDIGEEPW 9
P+IG PW
Sbjct: 231 PNIGSRPW 238
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 2 PDIGEEPW 9
P+IG PW
Sbjct: 231 PNIGSRPW 238
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 2 PDIGEEPW 9
P+IG PW
Sbjct: 215 PNIGSRPW 222
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 2 PDIGEEPW 9
P+IG PW
Sbjct: 231 PNIGSRPW 238
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 2 PDIGEEPW 9
P+IG PW
Sbjct: 231 PNIGSRPW 238
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 2 PDIGEEPW 9
P+IG PW
Sbjct: 231 PNIGSRPW 238
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 1 QPDIGEEPW 9
+P +GEE W
Sbjct: 189 EPQVGEESW 197
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 1 QPDIGEEPW 9
+P +GEE W
Sbjct: 192 EPQVGEESW 200
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 2 PDIGEEPW 9
P+IG PW
Sbjct: 215 PNIGSRPW 222
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 2 PDIGEEPW 9
P+IG PW
Sbjct: 215 PNIGSRPW 222
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 2 PDIGEEPW 9
P+IG PW
Sbjct: 215 PNIGSRPW 222
>sp|HEMA_I69A0|HEMAGGLUTININ A virus (strain A/England/878/1969
Query: 2 PDIGEEPW 9
P+IG PW
Sbjct: 215 PNIGSRPW 222
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 2 PDIGEEPW 9
P++G PW
Sbjct: 231 PNVGSRPW 238
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 2 PDIGEEPW 9
P++G PW
Sbjct: 231 PNVGSRPW 238
>sp|HEMA_I70A0|HEMAGGLUTININ A virus (strain A/Qu/7/1970
Query: 2 PDIGEEPW 9
P+IG PW
Sbjct: 215 PNIGSRPW 222
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 2 PDIGEEPW 9
P++G PW
Sbjct: 232 PNVGSRPW 239
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 2 PDIGEEPW 9
P++G PW
Sbjct: 231 PNVGSRPW 238
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 2 PDIGEEPW 9
P++G PW
Sbjct: 231 PNVGSRPW 238
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 2 PDIGEEPW 9
P++G PW
Sbjct: 231 PNVGSRPW 238
>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971
Query: 2 PDIGEEPW 9
P+IG PW
Sbjct: 230 PNIGLRPW 237
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 2 PDIGEEPW 9
P++G PW
Sbjct: 231 PNVGPRPW 238
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 DIGEEPWG 10
D+G PWG
Sbjct: 1595 DMGYPPWG 1602
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 1 QPDIGEEPW 9
Q G+EPW
Sbjct: 84 QSSYGKEPW 92
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 3 DIGEEPW 9
D G EPW
Sbjct: 86 DYGTEPW 92
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 1 QPDIGEEPW 9
+P IGE W
Sbjct: 203 EPQIGESQW 211
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 1 QPDIGEEPW 9
+P IGE W
Sbjct: 214 EPQIGESQW 222
>sp|VE2_HPV50|REGULATORY protein E2|Human papillomavirus type 50
Query: 1 QPDIGEEPW 9
+ D G EPW
Sbjct: 90 KSDFGSEPW 98
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 3 DIGEEPW 9
D G EPW
Sbjct: 86 DYGMEPW 92
>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25
Query: 1 QPDIGEEPW 9
+ + G+EPW
Sbjct: 84 KSEFGKEPW 92
>sp|PG181_VARV|PROTEIN OPG181|Variola virus
Query: 2 PDIGE 6
PDIGE
Sbjct: 283 PDIGE 287
>sp|PG181_VAR67|PROTEIN OPG181|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 PDIGE 6
PDIGE
Sbjct: 283 PDIGE 287
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 1 QPDIGEEPW 9
+P IGE W
Sbjct: 121 EPQIGENNW 129
>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40
Query: 5 GEEPW 9
GE PW
Sbjct: 283 GENPW 287
>sp|VE2_HPV09|REGULATORY protein E2|Human papillomavirus 9
Query: 5 GEEPW 9
G+EPW
Sbjct: 88 GQEPW 92
>sp|PG035_VAR67|PROTEIN OPG035|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 DIGEEP 8
DIGE P
Sbjct: 82 DIGERP 87
>sp|VE2_HPV29|REGULATORY protein E2|Human papillomavirus 29
Query: 1 QPDIGEEPW 9
Q G+EPW
Sbjct: 84 QSAYGKEPW 92
>sp|F13_MCV2|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 2
Query: 3 DIGEEPWG 10
D+GE P G
Sbjct: 108 DVGELPGG 115
>sp|F13_MCV1|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 1
Query: 3 DIGEEPWG 10
D+GE P G
Sbjct: 108 DVGELPGG 115
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 5 GEEPW 9
G EPW
Sbjct: 257 GSEPW 261
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 5 GEEPW 9
G EPW
Sbjct: 257 GSEPW 261
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 5 GEEPW 9
G EPW
Sbjct: 257 GSEPW 261
>sp|PG181_VACCC|PROTEIN OPG181|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PDIGE 6
PD+GE
Sbjct: 283 PDVGE 287
>sp|PG181_VACCA|PROTEIN OPG181|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PDIGE 6
PD+GE
Sbjct: 279 PDVGE 283
>sp|PG181_MONPV|PROTEIN OPG181|Monkeypox virus (MPXV)
Query: 2 PDIGE 6
PD+GE
Sbjct: 283 PDVGE 287
>sp|E4RF5_ADE02|EARLY 4 ORF6/7 control protein|Human adenovirus C serotype 2
Query: 1 QPDIGEEP 8
QP +G++P
Sbjct: 69 QPQVGQQP 76
>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14
Query: 5 GEEPW 9
G EPW
Sbjct: 88 GSEPW 92
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 5 GEEPW 9
G EPW
Sbjct: 255 GSEPW 259
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 DIGEEPWG 10
DIG + WG
Sbjct: 905 DIGWKAWG 912
>sp|VE2_HPV20|REGULATORY protein E2|Human papillomavirus 20
Query: 1 QPDIGEEPW 9
+ + G EPW
Sbjct: 84 KSEYGSEPW 92
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 5 GEEPW 9
G EPW
Sbjct: 256 GSEPW 260
>sp|VL2_HPV44|MINOR capsid protein L2|Human papillomavirus 44
Query: 2 PDIGEEP 8
PD+ EEP
Sbjct: 357 PDVTEEP 363
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 5 GEEPW 9
G EPW
Sbjct: 255 GSEPW 259
>sp|VE2_HPV17|REGULATORY protein E2|Human papillomavirus 17
Query: 5 GEEPW 9
G+EPW
Sbjct: 88 GKEPW 92
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 1 QPDIGEEPWG 10
QP E+P+G
Sbjct: 444 QPKDKEDPFG 453
>sp|VIF_HV1YB|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 5 GEEPW 9
GE+PW
Sbjct: 75 GEQPW 79
>sp|VE2_HPV15|REGULATORY protein E2|Human papillomavirus 15
Query: 5 GEEPW 9
G+EPW
Sbjct: 14 GKEPW 18
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 DIGEEPWG 10
DIG++P G
Sbjct: 1500 DIGQDPEG 1507
>sp|FUS_MUMPZ|FUSION glycoprotein F0|Mumps virus genotype N (strain
Query: 3 DIGEEPW 9
+IG E W
Sbjct: 311 EIGNEQW 317
>sp|FUS_MUMPS|FUSION glycoprotein F0|Mumps virus (strain SBL) (MuV)
Query: 3 DIGEEPW 9
+IG E W
Sbjct: 311 EIGNEQW 317
>sp|FUS_MUMPR|FUSION glycoprotein F0|Mumps virus (strain RW) (MuV)
Query: 3 DIGEEPW 9
+IG E W
Sbjct: 311 EIGNEQW 317
>sp|FUS_MUMPM|FUSION glycoprotein F0|Mumps virus genotype B (strain
Query: 3 DIGEEPW 9
+IG E W
Sbjct: 311 EIGNEQW 317
>sp|FUS_MUMPK|FUSION glycoprotein F0|Mumps virus (strain Kilham) (MuV)
Query: 3 DIGEEPW 9
+IG E W
Sbjct: 311 EIGNEQW 317
>sp|FUS_MUMP1|FUSION glycoprotein F0|Mumps virus (strain SBL-1) (MuV)
Query: 3 DIGEEPW 9
+IG E W
Sbjct: 311 EIGNEQW 317
>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)
Query: 1 QPDIGE 6
+PD+GE
Sbjct: 283 EPDVGE 288
44|Sequence|216|225|EEPWGLSQLD
>sp|VE2_HPV09|REGULATORY protein E2|Human papillomavirus 9
Query: 1 EEPWGLSQ 8
+EPW L+Q
Sbjct: 89 QEPWTLAQ 96
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PWGLSQLD 10
PWGLS D
Sbjct: 704 PWGLSSHD 711
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PWGLSQLD 10
PWGLS D
Sbjct: 707 PWGLSSHD 714
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PWGLSQLD 10
PWGLS D
Sbjct: 708 PWGLSSHD 715
>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)
Query: 1 EEPWGLSQ 8
E PW LSQ
Sbjct: 36 ENPWILSQ 43
>sp|VE2_HPV17|REGULATORY protein E2|Human papillomavirus 17
Query: 1 EEPWGLSQ 8
+EPW L+Q
Sbjct: 89 KEPWTLTQ 96
>sp|VE2_HPV15|REGULATORY protein E2|Human papillomavirus 15
Query: 1 EEPWGLSQ 8
+EPW L+Q
Sbjct: 15 KEPWTLTQ 22
>sp|VE5_HPV5B|PROBABLE protein E5|Human papillomavirus type 5b
Query: 2 EPWG 5
EPWG
Sbjct: 141 EPWG 144
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 EPWGLSQL 9
EPW L+ +
Sbjct: 259 EPWSLTTV 266
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 EPWGLSQL 9
EPW L+ +
Sbjct: 259 EPWSLTTV 266
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 EPWGLSQL 9
EPW L+ +
Sbjct: 259 EPWSLATV 266
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 EEPWGLSQLD 10
++PWG S+ D
Sbjct: 55 QQPWGQSRGD 64
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 EEPWGLSQLD 10
++PWG S+ D
Sbjct: 55 QQPWGQSRGD 64
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 EPWGLSQL 9
EPW L+ +
Sbjct: 258 EPWSLATV 265
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 EEPWG 5
E PWG
Sbjct: 1065 EAPWG 1069
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 EPWGLSQL 9
EPW L+ +
Sbjct: 257 EPWSLATV 264
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 1 EEPWGLSQ 8
+EPW L +
Sbjct: 89 KEPWTLQE 96
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 EEPWGL 6
+EPW +
Sbjct: 2191 QEPWSM 2196
>sp|VE2_HPV50|REGULATORY protein E2|Human papillomavirus type 50
Query: 2 EPWGLSQ 8
EPW LS+
Sbjct: 96 EPWTLSE 102
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 2 EPWGL 6
EPW L
Sbjct: 257 EPWSL 261
>sp|VE2_HPV22|REGULATORY protein E2|Human papillomavirus 22
Query: 1 EEPWGL 6
EEPW L
Sbjct: 89 EEPWTL 94
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 3 PWGLSQL 9
P GLSQ+
Sbjct: 157 PMGLSQI 163
>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25
Query: 1 EEPWGL 6
+EPW L
Sbjct: 89 KEPWSL 94
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 2 EPWGLSQ 8
EPW L +
Sbjct: 90 EPWTLQE 96
>sp|DUT_HCMVA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 2 EPWGLSQL 9
EPW L L
Sbjct: 208 EPWQLMNL 215
>sp|DUT_HCMVM|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 2 EPWGLSQL 9
EPW L L
Sbjct: 208 EPWQLMNL 215
>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21
Query: 1 EEPWGL 6
+EPW L
Sbjct: 89 KEPWSL 94
45|Sequence|221|230|LSQLDSGAGD
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 3 QLDSGAG 9
QLD G+G
Sbjct: 418 QLDPGSG 424
>sp|NEP_I34A1|NUCLEAR export protein|Influenza A virus (strain A/Puerto
Query: 3 QLDSGAGD 10
QL+S +GD
Sbjct: 20 QLESSSGD 27
>sp|NEP_I06A0|NUCLEAR export protein|Influenza A virus (strain
Query: 3 QLDSGAGD 10
QL+S +GD
Sbjct: 20 QLESSSGD 27
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 DSGAGD 10
DSGAG+
Sbjct: 50 DSGAGE 55
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 DSGAGD 10
DSGAG+
Sbjct: 50 DSGAGE 55
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 DSGAGD 10
DSGAG+
Sbjct: 50 DSGAGE 55
46|Sequence|226|235|SGAGDISTDA
>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig
Query: 1 SGAGDISTDA 10
SG+G I++DA
Sbjct: 278 SGSGIITSDA 287
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 4 GDISTDA 10
GD STDA
Sbjct: 373 GDRSTDA 379
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 4 GDISTDA 10
GD+S+DA
Sbjct: 74 GDLSSDA 80
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 4 GDISTDA 10
GD+S+DA
Sbjct: 74 GDLSSDA 80
>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 SGAGDISTDA 10
SG+G I +DA
Sbjct: 278 SGSGIIISDA 287
47|Sequence|231|240|ISTDATSGVH
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 2 STDATSGVH 10
+TDAT+ +H
Sbjct: 1910 ATDATNNIH 1918
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 2 STDATSGVH 10
+TDAT+ +H
Sbjct: 1910 ATDATNNIH 1918
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 2 STDATSGVH 10
+TDAT+ +H
Sbjct: 1910 ATDATNNIH 1918
>sp|YVFA_VACCC|UNCHARACTERIZED 7.1 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 DATSGVH 10
DAT+G+H
Sbjct: 2 DATAGLH 8
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 STDATS 7
STDATS
Sbjct: 1320 STDATS 1325
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 STDATS 7
STDATS
Sbjct: 1320 STDATS 1325
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 STDATS 7
STDATS
Sbjct: 1320 STDATS 1325
48|Sequence|236|245|TSGVHSNFST
>sp|BILF2_EBVB9|GLYCOPROTEIN BILF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 SGVHSNFS 9
SGVH N+S
Sbjct: 126 SGVHCNYS 133
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 GVHSNFST 10
G+H FST
Sbjct: 954 GIHLEFST 961
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 TSGVHSNFS 9
TSG S+FS
Sbjct: 707 TSGFSSDFS 715
>sp|VL2_HPV53|MINOR capsid protein L2|Human papillomavirus type 53
Query: 1 TSGVHS 6
TSGVHS
Sbjct: 186 TSGVHS 191
>sp|VL2_HPV30|MINOR capsid protein L2|Human papillomavirus 30
Query: 1 TSGVHS 6
TSGVHS
Sbjct: 186 TSGVHS 191
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 SGVHSNFST 10
+GV+ NF+T
Sbjct: 660 NGVNKNFTT 668
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 4 VHSNFST 10
+HS+FST
Sbjct: 596 LHSDFST 602
>sp|VL2_HPV66|MINOR capsid protein L2|Human papillomavirus 66
Query: 1 TSGVHS 6
TSG+HS
Sbjct: 186 TSGIHS 191
>sp|VL2_HPV56|MINOR capsid protein L2|Human papillomavirus 56
Query: 1 TSGVHS 6
TSG+HS
Sbjct: 186 TSGIHS 191
49|Sequence|241|250|SNFSTTIPPT
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 2 NFSTTIPPT 10
NF T+PPT
Sbjct: 405 NFGLTLPPT 413
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 FSTTIPPT 10
FST PPT
Sbjct: 4686 FSTVFPPT 4693
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 2 NFSTTIPPT 10
NF T+PPT
Sbjct: 404 NFGLTLPPT 412
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 FSTTIPPT 10
FST PPT
Sbjct: 4709 FSTVFPPT 4716
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 FSTTIPPT 10
F+TTIP T
Sbjct: 4380 FATTIPNT 4387
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 FSTTIPPT 10
F+TTIP T
Sbjct: 4355 FATTIPGT 4362
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 2 NFSTTIPPT 10
NF T+PP+
Sbjct: 404 NFGLTLPPS 412
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 2 NFSTTIPPT 10
NF T+PP+
Sbjct: 402 NFGLTLPPS 410
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 2 NFSTTIPPT 10
NF T+PP+
Sbjct: 432 NFGLTLPPS 440
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 2 NFSTTIPPT 10
NF T+PP+
Sbjct: 404 NFGLTLPPS 412
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 2 NFSTTIPPT 10
NF T+PP+
Sbjct: 431 NFGLTLPPS 439
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 2 NFSTTIPPT 10
NF T+PP+
Sbjct: 403 NFGLTLPPS 411
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 2 NFSTTIP 8
NF TT+P
Sbjct: 608 NFLTTMP 614
>sp|PORTL_HHV8P|PORTAL protein|Human herpesvirus 8 type P
Query: 1 SNFSTTIPP 9
S FS+ IPP
Sbjct: 449 SFFSSYIPP 457
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 SNFSTTIP 8
FSTT+P
Sbjct: 345 QQFSTTVP 352
50|Sequence|246|255|TIPPTSWQTD
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 TIPPTSWQTD 10
T+PP +QTD
Sbjct: 1108 TLPPLRYQTD 1117
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 TIPPTSWQTD 10
T+PP +QTD
Sbjct: 1108 TLPPLRYQTD 1117
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 4 PTSWQT 9
PTSWQ+
Sbjct: 188 PTSWQS 193
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 4 PTSWQT 9
PTSWQ+
Sbjct: 188 PTSWQS 193
>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain
Query: 1 TIPPTSWQ 8
T+P T W+
Sbjct: 31 TLPKTDWK 38
>sp|MATRX_HENDH|MATRIX protein|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 PTSWQ 8
PTSW+
Sbjct: 21 PTSWE 25
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 4 PTSWQT 9
PT+WQ+
Sbjct: 188 PTAWQS 193
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 4 PTSWQT 9
PT+WQ+
Sbjct: 188 PTAWQS 193
>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)
Query: 1 TIPPTS 6
TIPPT+
Sbjct: 25 TIPPTT 30
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 4 PTSWQTD 10
PT+W+++
Sbjct: 812 PTTWESE 818
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 TIPPTSWQTD 10
T+PP +QT+
Sbjct: 1104 TLPPLRFQTE 1113
>sp|VEMP_CVHN1|ENVELOPE small membrane protein|Human coronavirus HKU1 (isolate N1)
Query: 2 IPPTS 6
IPPTS
Sbjct: 74 IPPTS 78
>sp|NCAP_EBOZM|NUCLEOPROTEIN ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 4 PTSWQT 9
PT+WQ+
Sbjct: 188 PTAWQS 193
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 2 IPPTSW 7
+PPT+W
Sbjct: 45 LPPTTW 50
>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 4 PTSWQT 9
PT+WQ+
Sbjct: 188 PTAWQS 193
>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)
Query: 4 PTSWQT 9
PT+WQ+
Sbjct: 188 PTAWQS 193
>sp|POLG_LIVSB|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/SB
Query: 4 PTSWQ 8
PT+WQ
Sbjct: 210 PTAWQ 214
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 TIPPTSWQT 9
T+PP S+ T
Sbjct: 1080 TLPPVSYWT 1088
Query: 3 PPTSW 7
PP SW
Sbjct: 1430 PPVSW 1434
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 4 PTSWQ 8
PT+WQ
Sbjct: 490 PTAWQ 494
>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)
Query: 4 PTSWQ 8
PT+WQ
Sbjct: 210 PTAWQ 214
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 4 PTSWQ 8
PT+WQ
Sbjct: 490 PTAWQ 494
>sp|POLG_LIVNO|GENOME polyprotein|Louping ill virus (isolate Sheep
Query: 4 PTSWQ 8
PT+WQ
Sbjct: 210 PTAWQ 214
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 4 PTSWQ 8
PT+WQ
Sbjct: 490 PTAWQ 494
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 4 PTSWQ 8
PT+WQ
Sbjct: 490 PTAWQ 494
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 4 PTSWQ 8
PT+WQ
Sbjct: 490 PTAWQ 494
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 4 PTSWQ 8
PT+WQ
Sbjct: 490 PTAWQ 494
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 4 PTSWQ 8
PT+WQ
Sbjct: 490 PTAWQ 494
>sp|POLG_LIVN1|GENOME polyprotein|Louping ill virus (strain Negishi
Query: 4 PTSWQ 8
PT+WQ
Sbjct: 210 PTAWQ 214
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 4 PTSWQ 8
PT+WQ
Sbjct: 490 PTAWQ 494
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 5 TSWQTD 10
T WQTD
Sbjct: 1304 TVWQTD 1309
>sp|PHOSP_ISFV|PHOSPHOPROTEIN virus (ISFV)
Query: 1 TIPPTSWQTD 10
T PP+S ++D
Sbjct: 186 TTPPSSLRSD 195
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 TIPPTS 6
TIPPT+
Sbjct: 58 TIPPTA 63
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 TIPPTS 6
TIPPT+
Sbjct: 58 TIPPTA 63
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 TIPPTS 6
TIPPT+
Sbjct: 58 TIPPTA 63
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 TIPPTS 6
TIPPT+
Sbjct: 58 TIPPTA 63
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PPTSWQ 8
PP+ W+
Sbjct: 481 PPSGWE 486
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPTSWQ 8
PP+ W+
Sbjct: 481 PPSGWE 486
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 2 IPPTSWQ 8
+P T+WQ
Sbjct: 366 LPETTWQ 372
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 2 IPPTSWQ 8
+P T+WQ
Sbjct: 366 LPETTWQ 372
51|Sequence|251|260|SWQTDLPPHH
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 5 DLPPHH 10
DLPP H
Sbjct: 5609 DLPPSH 5614
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 2 WQTDLPP 8
+ TD+PP
Sbjct: 439 YTTDIPP 445
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 4 TDLPP 8
TD+PP
Sbjct: 2214 TDIPP 2218
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 4 TDLPP 8
TD+PP
Sbjct: 2214 TDIPP 2218
>sp|TAX_HTL1F|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 SWQTDLPPHH 10
+WQ+ L P H
Sbjct: 229 AWQSGLLPFH 238
>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 DLPPHH 10
DLPP H
Sbjct: 42 DLPPSH 47
>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 DLPPHH 10
DLPP H
Sbjct: 42 DLPPSH 47
>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 DLPPHH 10
DLPP H
Sbjct: 42 DLPPSH 47
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 SWQTDLPPHH 10
+WQ D P H
Sbjct: 36 TWQRDQPDTH 45
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 4 TDLPP 8
TD+PP
Sbjct: 2410 TDIPP 2414
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 SWQTDLPP 8
+W T+ PP
Sbjct: 246 TWMTNNPP 253
>sp|VSSGP_EBOZM|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Mayinga-76)
Query: 2 WQTDLPPH 9
W+T PH
Sbjct: 291 WETKKKPH 298
>sp|VSSGP_EBOZ5|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Kikwit-95)
Query: 2 WQTDLPPH 9
W+T PH
Sbjct: 291 WETKKKPH 298
>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 WQTDLPP 8
W T+ PP
Sbjct: 249 WMTNNPP 255
>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 SWQTDLPP 8
+W T+ PP
Sbjct: 246 TWMTNNPP 253
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 5 DLPPHH 10
DLPP H
Sbjct: 469 DLPPVH 474
>sp|PHOSP_VSNJM|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 2 WQTDLP 7
W+ DLP
Sbjct: 82 WEEDLP 87
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 5 DLPPHH 10
DLPP H
Sbjct: 469 DLPPVH 474
>sp|TAX_HTLV2|PROTEIN Tax-2|Human T-cell leukemia virus 2
Query: 1 SWQTDLPPHH 10
+W T L P+H
Sbjct: 229 AWCTGLLPYH 238
>sp|TAX_HTL1C|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 SWQTDLPPHH 10
+WQ L P H
Sbjct: 229 AWQNGLLPFH 238
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 5 DLPPHH 10
DLPP H
Sbjct: 469 DLPPVH 474
52|Sequence|256|265|LPPHHPSSAC
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn
Query: 1 LPPHHPSS 8
L HHPSS
Sbjct: 30 LSQHHPSS 37
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 PHHPSSA 9
PHHPS +
Sbjct: 1792 PHHPSPS 1798
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 4 HHPSSA 9
HHPS+A
Sbjct: 199 HHPSTA 204
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 LPPHHPSSAC 10
L PH P ++C
Sbjct: 1715 LTPHVPGTSC 1724
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 LPPHHPSSAC 10
L PH P ++C
Sbjct: 1715 LTPHVPGTSC 1724
>sp|PG128_VACCC|PROTEIN OPG128|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PPHHPSSAC 10
PP SSAC
Sbjct: 13 PPKRCSSAC 21
>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933
Query: 4 HHPSSA 9
HHPSS+
Sbjct: 196 HHPSSS 201
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 LPPHHPSSAC 10
+PP P S C
Sbjct: 1190 IPPESPLSTC 1199
Query: 1 LPPHHP 6
+PP HP
Sbjct: 416 MPPKHP 421
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 LPPHHPSSAC 10
+PP P S C
Sbjct: 1190 IPPESPLSTC 1199
>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935
Query: 4 HHPSSA 9
HHPSS+
Sbjct: 197 HHPSSS 202
>sp|CXCL1_HCMVM|CHEMOKINE vCXCL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LPPHHPSS 8
L PHHP S
Sbjct: 77 LSPHHPFS 84
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 HPSSAC 10
HPSS C
Sbjct: 750 HPSSDC 755
>sp|NSS_TOSV|NON-STRUCTURAL protein NS-S|Toscana virus (Tos)
Query: 2 PPHHP 6
PPH+P
Sbjct: 310 PPHYP 314
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 5 HPSSAC 10
HPSS C
Sbjct: 427 HPSSDC 432
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 LPPHHPSSAC 10
+PPH P SA
Sbjct: 456 VPPHRPPSAA 465
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 LPPHHPSSAC 10
+PPH P SA
Sbjct: 451 VPPHRPPSAA 460
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PHHPSSA 9
PH P SA
Sbjct: 550 PHSPQSA 556
>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936
Query: 4 HHPSSA 9
HHPS++
Sbjct: 197 HHPSNS 202
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 4 HHPSS 8
HHPS+
Sbjct: 199 HHPST 203
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 4 HHPSS 8
HHPS+
Sbjct: 183 HHPST 187
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 4 HHPSS 8
HHPS+
Sbjct: 199 HHPST 203
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 4 HHPSS 8
HHPS+
Sbjct: 183 HHPST 187
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 4 HHPSS 8
HHPS+
Sbjct: 199 HHPST 203
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 4 HHPSS 8
HHPS+
Sbjct: 183 HHPST 187
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 4 HHPSS 8
HHPS+
Sbjct: 183 HHPST 187
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 4 HHPSS 8
HHPS+
Sbjct: 199 HHPST 203
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 4 HHPSS 8
HHPS+
Sbjct: 199 HHPST 203
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 4 HHPSS 8
HHPS+
Sbjct: 199 HHPST 203
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 4 HHPSS 8
HHPS+
Sbjct: 199 HHPST 203
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 4 HHPSS 8
HHPS+
Sbjct: 199 HHPST 203
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 4 HHPSS 8
HHPS+
Sbjct: 199 HHPST 203
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 4 HHPSS 8
HHPS+
Sbjct: 200 HHPST 204
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 4 HHPSS 8
HHPS+
Sbjct: 183 HHPST 187
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 4 HHPSS 8
HHPS+
Sbjct: 199 HHPST 203
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 4 HHPSS 8
HHPS+
Sbjct: 199 HHPST 203
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 4 HHPSS 8
HHPS+
Sbjct: 199 HHPST 203
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 4 HHPSS 8
HHPS+
Sbjct: 199 HHPST 203
>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971
Query: 4 HHPSS 8
HHPS+
Sbjct: 198 HHPST 202
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 4 HHPSS 8
HHPS+
Sbjct: 199 HHPST 203
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 4 HHPSS 8
HHPS+
Sbjct: 199 HHPST 203
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 4 HHPSS 8
HHPS+
Sbjct: 199 HHPST 203
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 4 HHPSS 8
HHPS+
Sbjct: 199 HHPST 203
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 4 HHPSS 8
HHPS+
Sbjct: 199 HHPST 203
>sp|PG128_MONPV|PROTEIN OPG128|Monkeypox virus (MPXV)
Query: 2 PPHHPSSAC 10
PP SS C
Sbjct: 13 PPKRCSSTC 21
>sp|HEMA_I83A1|HEMAGGLUTININ A virus (strain A/Chile/1/1983
Query: 4 HHPSS 8
HHPS+
Sbjct: 197 HHPSN 201
>sp|HEMA_I80AA|HEMAGGLUTININ A virus (strain A/India/6263/1980
Query: 4 HHPSS 8
HHPS+
Sbjct: 197 HHPSN 201
>sp|HEMA_I79A4|HEMAGGLUTININ A virus (strain A/Kiev/59/1979
Query: 4 HHPSS 8
HHPS+
Sbjct: 197 HHPSN 201
>sp|HEMA_I77AB|HEMAGGLUTININ A virus (strain A/USSR/90/1977
Query: 4 HHPSS 8
HHPS+
Sbjct: 197 HHPSN 201
>sp|HEMA_I77AA|HEMAGGLUTININ A virus (strain A/Brazil/11/1978
Query: 4 HHPSS 8
HHPS+
Sbjct: 197 HHPSN 201
>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954
Query: 4 HHPSS 8
HHPS+
Sbjct: 197 HHPSN 201
>sp|HEMA_I51A0|HEMAGGLUTININ A virus (strain A/USA:Albany/12/1951
Query: 4 HHPSS 8
HHPS+
Sbjct: 197 HHPSN 201
>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945
Query: 4 HHPSS 8
HHPS+
Sbjct: 197 HHPSN 201
>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943
Query: 4 HHPSS 8
HHPS+
Sbjct: 196 HHPSN 200
>sp|HEMA_I40A0|HEMAGGLUTININ A virus (strain A/Hickox/1940
Query: 4 HHPSS 8
HHPS+
Sbjct: 197 HHPSN 201
>sp|ORF32_VZVO|PHOSPHOPROTEIN 32|Varicella-zoster virus (strain Oka vaccine)
Query: 4 HHPSSAC 10
HHPS C
Sbjct: 17 HHPSKQC 23
>sp|ORF32_VZVD|PHOSPHOPROTEIN 32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 HHPSSAC 10
HHPS C
Sbjct: 17 HHPSKQC 23
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 PPHHP 6
PPH+P
Sbjct: 1794 PPHNP 1798
>sp|HEMA_I54A2|HEMAGGLUTININ A virus (strain A/Malaysia:Malaya/302/1954
Query: 4 HHPSS 8
HHPS+
Sbjct: 197 HHPSN 201
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 PPHHP 6
PPH+P
Sbjct: 1794 PPHNP 1798
>sp|HEMA_I96A2|HEMAGGLUTININ A virus (strain A/USA:Memphis/10/1996
Query: 4 HHPSS 8
HHPS+
Sbjct: 197 HHPSN 201
>sp|HEMA_I96A3|HEMAGGLUTININ A virus (strain A/China:Nanchang/11/1996
Query: 4 HHPSS 8
HHPS+
Sbjct: 196 HHPSN 200
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 LPPHHPSSAC 10
LPP AC
Sbjct: 435 LPPREGELAC 444
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 PHHPSSA 9
PH PS++
Sbjct: 445 PHDPSAS 451
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 PPHHPSS 8
PP PSS
Sbjct: 694 PPEGPSS 700
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 PHHPSSA 9
PH PS++
Sbjct: 445 PHDPSAS 451
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 PPHHPSS 8
PP PSS
Sbjct: 694 PPEGPSS 700
>sp|PB1F2_I01A3|PROTEIN PB1-F2|Influenza A virus (strain A/Chicken/Hong
Query: 3 PHHPSS 8
P HP+S
Sbjct: 30 PEHPNS 35
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 5 HPSSAC 10
HP+S C
Sbjct: 209 HPNSVC 214
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 PPHHPSS 8
PP PSS
Sbjct: 694 PPEGPSS 700
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 PPHHPSS 8
PP PSS
Sbjct: 694 PPEGPSS 700
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 5 HPSSAC 10
HP+S C
Sbjct: 209 HPNSVC 214
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 5 HPSSAC 10
HP+S C
Sbjct: 209 HPNSVC 214
>sp|VE2_HPV63|REGULATORY protein E2|Human papillomavirus type 63
Query: 4 HHPSS 8
HHP S
Sbjct: 238 HHPKS 242
>sp|PB1F2_I97A1|PROTEIN PB1-F2|Influenza A virus (strain A/Hong
Query: 3 PHHPSS 8
P HP+S
Sbjct: 30 PEHPNS 35
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PHHP 6
PHHP
Sbjct: 532 PHHP 535
>sp|BEL1_SFV1|PROTEIN Bel-1|Simian foamy virus type 1
Query: 2 PPHHPSSA 9
PP HPS+
Sbjct: 58 PPMHPSTV 65
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 3 PHHPSSA 9
P+HP S+
Sbjct: 961 PYHPQSS 967
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 4 HHPS 7
HHPS
Sbjct: 459 HHPS 462
>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United
Query: 2 PPHHPSSA 9
PP HPS +
Sbjct: 378 PPSHPSGS 385
53|Sequence|261|270|PSSACSDGTL
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 4 ACSDGTL 10
+CSDGT
Sbjct: 56 SCSDGTF 62
>sp|PG190_VACCT|PROTEIN OPG190|Vaccinia virus (strain Tian Tan)
Query: 1 PSSACSDG 8
PSS C DG
Sbjct: 221 PSSTCIDG 228
>sp|PG190_VACC0|PROTEIN OPG190|Vaccinia virus (strain LC16m0) (VACV)
Query: 1 PSSACSDG 8
PSS C DG
Sbjct: 221 PSSTCIDG 228
>sp|PG190_VACCA|PROTEIN OPG190|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PSSACSDG 8
PSS C DG
Sbjct: 221 PSSTCIDG 228
>sp|PG190_MONPV|PROTEIN OPG190|Monkeypox virus (MPXV)
Query: 1 PSSACSDG 8
PSS C DG
Sbjct: 221 PSSTCIDG 228
>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004
Query: 2 SSACSDGT 9
+SAC DGT
Sbjct: 161 ASACHDGT 168
>sp|PG190_VACCL|PROTEIN OPG190|Vaccinia virus (strain Lister) (VACV)
Query: 1 PSSACSDG 8
PSS C DG
Sbjct: 221 PSSTCIDG 228
>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 SSACSDGT 9
+SAC DGT
Sbjct: 161 ASACHDGT 168
>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 SSACSDGT 9
+SAC DGT
Sbjct: 161 ASACHDGT 168
>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky
Query: 2 SSACSDGT 9
+SAC DGT
Sbjct: 161 ASACHDGT 168
>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 SSACSDGT 9
+SAC DGT
Sbjct: 161 ASACHDGT 168
>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 SSACSDGT 9
+SAC DGT
Sbjct: 161 ASACHDGT 168
>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky
Query: 2 SSACSDGT 9
+SAC DGT
Sbjct: 161 ASACHDGT 168
>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 SSACSDGT 9
+SAC DGT
Sbjct: 161 ASACHDGT 168
>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005
Query: 2 SSACSDGT 9
+SAC DGT
Sbjct: 153 ASACHDGT 160
>sp|NS7A_SARS|ORF7A protein|Severe acute respiratory syndrome coronavirus
Query: 4 ACSDGT 9
AC+DGT
Sbjct: 66 ACADGT 71
>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 PSSACSDG 8
PS++CS+G
Sbjct: 186 PSTSCSEG 193
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 1 PSSACSDG 8
P++ CSDG
Sbjct: 210 PATDCSDG 217
>sp|PG128_VACCC|PROTEIN OPG128|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SSACSD 7
SSAC+D
Sbjct: 18 SSACAD 23
>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 SSACSDGT 9
+SAC DGT
Sbjct: 181 ASACHDGT 188
>sp|NRAM_I02A1|NEURAMINIDASE A virus (strain A/Guinea
Query: 2 SSACSDGT 9
+SAC DGT
Sbjct: 161 ASACHDGT 168
>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002
Query: 2 SSACSDGT 9
+SAC DGT
Sbjct: 166 ASACHDGT 173
>sp|PG166_VARV|PROTEIN OPG166|Variola virus
Query: 5 CSDGTL 10
C DGTL
Sbjct: 242 CVDGTL 247
>sp|PG166_VAR67|PROTEIN OPG166|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 CSDGTL 10
C DGTL
Sbjct: 242 CVDGTL 247
>sp|PG166_VACCC|PROTEIN OPG166|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 CSDGTL 10
C DGTL
Sbjct: 242 CVDGTL 247
>sp|PG166_MONPV|PROTEIN OPG166|Monkeypox virus (MPXV)
Query: 5 CSDGTL 10
C DGTL
Sbjct: 242 CVDGTL 247
>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 SSACSDGT 9
+SAC DGT
Sbjct: 181 ASACHDGT 188
>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong
Query: 2 SSACSDGT 9
+SAC DGT
Sbjct: 181 ASACHDGT 188
>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 SSACSDGT 9
+SAC DGT
Sbjct: 181 ASACHDGT 188
>sp|VP35_MABVM|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 SSACSDGTL 10
ACS GT+
Sbjct: 172 QQACSKGTM 180
>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong
Query: 2 SSACSDGT 9
+SAC DGT
Sbjct: 181 ASACHDGT 188
>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996
Query: 2 SSACSDGT 9
+SAC DGT
Sbjct: 181 ASACHDGT 188
>sp|VP35_MABVO|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 SSACSDGTL 10
ACS GT+
Sbjct: 172 QQACSKGTM 180
>sp|PG190_VACCC|PROTEIN OPG190|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PSSACSDG 8
PSS C DG
Sbjct: 221 PSSTCIDG 228
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 5 CSDGTL 10
CSDG +
Sbjct: 392 CSDGVI 397
>sp|VP35_MABVP|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Popp-67)
Query: 4 ACSDGTL 10
ACS GT+
Sbjct: 174 ACSKGTM 180
>sp|US15_HCMVM|MEMBRANE protein US15|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 CSDGTL 10
C DGTL
Sbjct: 128 CLDGTL 133
>sp|US15_HCMVA|UNCHARACTERIZED protein HVLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 CSDGTL 10
C DGTL
Sbjct: 128 CLDGTL 133
54|Sequence|266|275|SDGTLKLNTA
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 1 SDGTLKLNTA 10
+DGTLK+ A
Sbjct: 366 TDGTLKIQFA 375
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 SDGTLKLNTA 10
+DGTLK+ +
Sbjct: 366 TDGTLKIQVS 375
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 SDGTLKLNTA 10
+DGTLK+ +
Sbjct: 366 TDGTLKIQVS 375
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 SDGTLKLNTA 10
+DGTLK+ +
Sbjct: 366 TDGTLKIQVS 375
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 SDGTLKLNTA 10
+DGTLK+ +
Sbjct: 367 TDGTLKIQVS 376
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 SDGTLKLNTA 10
+DGTLK+ +
Sbjct: 367 TDGTLKIQVS 376
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 SDGTLKLNTA 10
+DGTLK+ +
Sbjct: 367 TDGTLKIQVS 376
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 1 SDGTLKLNTA 10
+DGTLK+ +
Sbjct: 367 TDGTLKIQVS 376
>sp|UNG_HHV2H|URACIL-DNA glycosylase|Human herpesvirus 2 (strain HG52)
Query: 2 DGTLKLNT 9
DG L LNT
Sbjct: 152 DGVLLLNT 159
>sp|UNG_HHV23|URACIL-DNA glycosylase|Human herpesvirus 2 (strain 333)
Query: 2 DGTLKLNT 9
DG L LNT
Sbjct: 192 DGVLLLNT 199
>sp|UNG_HHV11|URACIL-DNA glycosylase|Human herpesvirus 1 (strain 17)
Query: 2 DGTLKLNT 9
DG L LNT
Sbjct: 231 DGVLLLNT 238
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 SDGTLKLNT 9
SD TL +NT
Sbjct: 1646 SDATLVINT 1654
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 SDGTLKLNT 9
SD TL +NT
Sbjct: 1646 SDATLVINT 1654
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 SDGTLKLNT 9
SD TL +NT
Sbjct: 1646 SDATLVINT 1654
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 SDGTLKLNT 9
SD TL +NT
Sbjct: 1646 SDATLVINT 1654
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 SDGTLKLNT 9
SD TL +NT
Sbjct: 1646 SDATLVINT 1654
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 SDGTLKLNTA 10
SDG LK+ +
Sbjct: 376 SDGMLKIQVS 385
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 1 SDGTLKLNTA 10
SDG LK+ +
Sbjct: 42 SDGMLKIQVS 51
>sp|PG100_MONPV|VIRION assembly protein OPG100|Monkeypox virus (MPXV)
Query: 1 SDGTLKLN 8
+DG +KLN
Sbjct: 92 TDGRVKLN 99
55|Sequence|271|280|KLNTAASTED
>sp|IR12_HCMVA|UNCHARACTERIZED protein IRL12|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 NTAASTE 9
NTAA+TE
Sbjct: 107 NTAATTE 113
56|Sequence|276|285|ASTEDVKIVI
>sp|UNG_HHV8P|URACIL-DNA glycosylase|Human herpesvirus 8 type P
Query: 4 EDVKIVI 10
ED+K+VI
Sbjct: 78 EDIKVVI 84
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 4 EDVKIVI 10
EDV++VI
Sbjct: 953 EDVRVVI 959
>sp|NS1_I82A8|NON-STRUCTURAL protein 1|Influenza A virus (strain
Query: 2 STEDVKIVI 10
STEDVK I
Sbjct: 170 STEDVKNAI 178
57|Sequence|281|290|VKIVIKTEVQ
***** No hits found ******
58|Sequence|286|295|KTEVQEEEVV
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 TEVQEEEVV 10
TEV EEVV
Sbjct: 749 TEVLTEEVV 757
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 3 EVQEEEVV 10
E+Q+EEV+
Sbjct: 40 EIQQEEVI 47
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 TEVQEEEVV 10
TEV EEVV
Sbjct: 749 TEVLTEEVV 757
>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4
Query: 5 QEEEVV 10
QEEE+V
Sbjct: 52 QEEEIV 57
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 TEVQEEE 8
TEV++EE
Sbjct: 1446 TEVEKEE 1452
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 TEVQEEE 8
TEV++EE
Sbjct: 1446 TEVEKEE 1452
59|Sequence|291|300|EEEVVATPVH
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 3 EVVATPV 9
EVV TPV
Sbjct: 1150 EVVITPV 1156
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 3 EVVATPVH 10
E VATP H
Sbjct: 876 EAVATPGH 883
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 3 EVVATPVH 10
E VATP H
Sbjct: 876 EAVATPGH 883
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 EVVATPVH 10
E VATP H
Sbjct: 876 EAVATPGH 883
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 3 EVVATPVH 10
E VATP H
Sbjct: 876 EAVATPGH 883
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 EVVATPVH 10
E VATP H
Sbjct: 876 EAVATPGH 883
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 3 EVVATPVH 10
E VATP H
Sbjct: 876 EAVATPGH 883
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 3 EVVATPVH 10
E VATP H
Sbjct: 876 EAVATPGH 883
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 3 EVVATPVH 10
E VATP H
Sbjct: 876 EAVATPGH 883
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 3 EVVATPVH 10
E VATP H
Sbjct: 876 EAVATPGH 883
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 3 EVVATP 8
EVVATP
Sbjct: 1691 EVVATP 1696
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 EEEVVATP 8
E EV+A+P
Sbjct: 72 EAEVIASP 79
60|Sequence|296|305|ATPVHPTDLE
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 ATPVHPT 7
A PVHPT
Sbjct: 18 AIPVHPT 24
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 ATPVHPT 7
A PVHPT
Sbjct: 18 AIPVHPT 24
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ATPVHPT 7
A PVHPT
Sbjct: 18 AIPVHPT 24
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ATPVHPTD 8
+TP+ PTD
Sbjct: 456 STPISPTD 463
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 PVHPTD 8
PV+PTD
Sbjct: 2506 PVNPTD 2511
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 PVHPTD 8
PV+PTD
Sbjct: 2526 PVNPTD 2531
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 PVHPTD 8
PV+PTD
Sbjct: 2556 PVNPTD 2561
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 PVHPTD 8
PV+PTD
Sbjct: 2506 PVNPTD 2511
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 PVHPTD 8
PV+PTD
Sbjct: 2526 PVNPTD 2531
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 PVHPTD 8
PV+PTD
Sbjct: 2556 PVNPTD 2561
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 2 TPVHP 6
TP+HP
Sbjct: 127 TPIHP 131
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 PVHPTD 8
P++PTD
Sbjct: 2480 PINPTD 2485
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 PVHPTD 8
P++PTD
Sbjct: 2457 PINPTD 2462
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 TPVHPTDLE 10
TPV+PT ++
Sbjct: 902 TPVNPTTIK 910
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 PVHPTD 8
P++PTD
Sbjct: 2457 PINPTD 2462
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 PVHPTD 8
P++PTD
Sbjct: 2480 PINPTD 2485
>sp|VE6_HPV48|PROTEIN E6|Human papillomavirus type 48
Query: 3 PVHPTDLE 10
P PTDL+
Sbjct: 3 PQFPTDLD 10
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 5 HPTDL 9
HPTDL
Sbjct: 1663 HPTDL 1667
>sp|UL148_HCMVM|MEMBRANE protein UL148|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ATPVHPTDLE 10
TP TDLE
Sbjct: 66 CTPFWSTDLE 75
>sp|IR01_HCMVM|PROTEIN RL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TPVHPTD 8
TP+HP D
Sbjct: 12 TPLHPED 18
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 4 VHPTDLE 10
V P+DLE
Sbjct: 557 VQPSDLE 563
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 ATPVHPTDL 9
ATP HP L
Sbjct: 723 ATPTHPEPL 731
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 5 HPTDL 9
HPTDL
Sbjct: 136 HPTDL 140
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 5 HPTDL 9
HPTDL
Sbjct: 136 HPTDL 140
>sp|NEF_HV1V9|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 PVHPTDLE 10
PV P D+E
Sbjct: 148 PVDPQDVE 155
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 ATPVHPTDL 9
ATP HP L
Sbjct: 692 ATPTHPEPL 700
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 TPVHP 6
TP+HP
Sbjct: 572 TPIHP 576
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PVHPTDLE 10
P HPT +E
Sbjct: 464 PAHPTPVE 471
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PVHPTDLE 10
P HPT +E
Sbjct: 464 PAHPTPVE 471
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 ATPVHPTDLE 10
A + PTDLE
Sbjct: 471 AGSLRPTDLE 480
>sp|ICP27_HHV6U|MRNA export factor ICP27 homolog|Human herpesvirus 6A (strain
Query: 3 PVHPTDL 9
PV+P DL
Sbjct: 201 PVNPQDL 207
61|Sequence|301|310|PTDLEAHGTL
>sp|NEF_HV1RH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DLEAHGTL 10
DLE HGT+
Sbjct: 36 DLEKHGTI 43
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 PTDLEAHGTL 10
PT +E+HG +
Sbjct: 436 PTTVESHGKI 445
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 TDLEAHG 8
TDLE HG
Sbjct: 232 TDLELHG 238
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 TDLEAHG 8
TDLE HG
Sbjct: 232 TDLELHG 238
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 TDLEAHG 8
TDLE HG
Sbjct: 232 TDLELHG 238
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 TDLEAHG 8
TDLE HG
Sbjct: 232 TDLELHG 238
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 TDLEAHG 8
TDLE HG
Sbjct: 232 TDLELHG 238
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 TDLEAHG 8
TDLE HG
Sbjct: 232 TDLELHG 238
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 TDLEAHG 8
TDLE HG
Sbjct: 232 TDLELHG 238
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 TDLEAHG 8
TDLE HG
Sbjct: 232 TDLELHG 238
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 TDLEAHG 8
TDLE HG
Sbjct: 232 TDLELHG 238
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 TDLEAHG 8
TDLE HG
Sbjct: 232 TDLELHG 238
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 PTDLEAHG 8
PT +E+HG
Sbjct: 436 PTTVESHG 443
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 PTDLEAHG 8
PT +E+HG
Sbjct: 436 PTTVESHG 443
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 TDLEAHG 8
TDLE HG
Sbjct: 232 TDLELHG 238
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 1 PTDLEAHG 8
P D+ AHG
Sbjct: 123 PIDIRAHG 130
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 1 PTDLEAHG 8
P D+ AHG
Sbjct: 123 PIDIRAHG 130
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 TDLEAHG 8
TDLE HG
Sbjct: 211 TDLELHG 217
>sp|NEF_HV1MN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DLEAHGTL 10
DLE HG L
Sbjct: 38 DLEKHGAL 45
>sp|NEF_HV1S3|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DLEAHGTL 10
DLE HG L
Sbjct: 35 DLEKHGAL 42
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 PTDLEAH 7
P DL+AH
Sbjct: 713 PPDLDAH 719
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 PTDLEAH 7
P DL+AH
Sbjct: 713 PPDLDAH 719
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 PTDLEAH 7
P DL+AH
Sbjct: 713 PPDLDAH 719
>sp|X_HBVB2|PROTEIN X|Hepatitis B virus genotype B2
Query: 2 TDLEAH 7
TDLEAH
Sbjct: 106 TDLEAH 111
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 PTDLEAHG 8
PT + AHG
Sbjct: 431 PTSVAAHG 438
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PTDLEAHGTL 10
P EAHG+L
Sbjct: 342 PFRFEAHGSL 351
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 1 PTDLEAHGTL 10
P EAHG+L
Sbjct: 342 PFRFEAHGSL 351
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 PTDLEAHGT 9
PT EAH T
Sbjct: 363 PTTGEAHNT 371
Query: 3 DLEAHGTL 10
DL++HG
Sbjct: 1446 DLDSHGNF 1453
>sp|NEF_HV1H2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DLEAHGTL 10
DLE HG +
Sbjct: 36 DLEKHGAI 43
>sp|NEF_HV1JR|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DLEAHGTL 10
DLE HG +
Sbjct: 46 DLEKHGAI 53
>sp|NEF_HV1LA|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DLEAHGTL 10
DLE HG +
Sbjct: 36 DLEKHGAI 43
>sp|NEF_HV1BR|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DLEAHGTL 10
DLE HG +
Sbjct: 36 DLEKHGAI 43
>sp|NEF_HV1LW|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DLEAHGTL 10
DLE HG +
Sbjct: 36 DLEKHGAI 43
>sp|NEF_HV1B8|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DLEAHGTL 10
DLE HG +
Sbjct: 36 DLEKHGAI 43
>sp|NEF_HV1SC|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DLEAHGTL 10
DLE HG +
Sbjct: 36 DLEKHGAI 43
>sp|NEF_HV1ND|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DLEAHGTL 10
DLE HG +
Sbjct: 36 DLEKHGAI 43
>sp|NEF_HV1Z6|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DLEAHGTL 10
DLE HG +
Sbjct: 41 DLEKHGAI 48
>sp|NEF_HV1Y2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DLEAHGTL 10
DLE HG +
Sbjct: 46 DLERHGAI 53
>sp|NEF_HV1EL|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DLEAHGTL 10
DLE HG +
Sbjct: 36 DLEKHGAI 43
>sp|NEF_HV1A2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DLEAHGTL 10
DLE HG +
Sbjct: 40 DLEKHGAI 47
>sp|NEF_HV1Z2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DLEAHGTL 10
DLE HG +
Sbjct: 36 DLEKHGAI 43
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 1 PTDLEAHG 8
P D E HG
Sbjct: 657 PEDEEEHG 664
>sp|NEF_HV1B1|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DLEAHGTL 10
DLE HG +
Sbjct: 36 DLEKHGAI 43
>sp|NEF_HV1OY|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DLEAHGTL 10
DLE HG +
Sbjct: 41 DLEKHGAI 48
>sp|NEF_HV112|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DLEAHGTL 10
DLE HG +
Sbjct: 36 DLEKHGAI 43
>sp|NEF_HV1H3|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DLEAHGTL 10
DLE HG +
Sbjct: 36 DLEKHGAI 43
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 PTDLEA 6
P+DLEA
Sbjct: 1691 PSDLEA 1696
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 PTDLEA 6
P+DLEA
Sbjct: 1691 PSDLEA 1696
>sp|NEF_HV1S1|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DLEAHGTL 10
DLE HG +
Sbjct: 38 DLEKHGAI 45
>sp|NEF_HV1BN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DLEAHGTL 10
DLE HG +
Sbjct: 48 DLEKHGAI 55
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 PTDLEA 6
P+DLEA
Sbjct: 1691 PSDLEA 1696
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 PTDLEA 6
P+DLEA
Sbjct: 1690 PSDLEA 1695
>sp|GCVK_HHV7J|PROBABLE ganciclovir kinase|Human herpesvirus 7 (strain JI)
Query: 2 TDLEAH 7
TDL AH
Sbjct: 126 TDLSAH 131
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 1 PTDLEAHGTL 10
P DLEA G
Sbjct: 622 PWDLEATGAC 631
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 1 PTDLEAHGTL 10
P DLEA G
Sbjct: 622 PWDLEATGAC 631
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 PTDLEAHGTL 10
P DLEA G
Sbjct: 622 PWDLEATGAC 631
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 1 PTDLEAHG 8
P DLEA G
Sbjct: 622 PWDLEATG 629
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 1 PTDLEAHGTL 10
P DLEA G
Sbjct: 622 PWDLEATGAC 631
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 1 PTDLEAHG 8
P DLEA G
Sbjct: 622 PWDLEATG 629
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 1 PTDLEAHGTL 10
P DLEA G
Sbjct: 622 PWDLEATGAC 631
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 1 PTDLEAHG 8
P DLEA G
Sbjct: 622 PWDLEATG 629
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 1 PTDLEAHGTL 10
P DLEA G
Sbjct: 622 PWDLEATGAC 631
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 4 LEAHG 8
LEAHG
Sbjct: 1079 LEAHG 1083
62|Sequence|306|315|AHGTLFGPGQ
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 1 AHGTLFGPG 9
A G +FGPG
Sbjct: 1105 ASGRVFGPG 1113
>sp|P30II_HTL1A|ACCESSORY protein p30II|Human T-cell leukemia virus 1
Query: 3 GTLFGP 8
GT+FGP
Sbjct: 191 GTMFGP 196
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 GTLFGPGQ 10
GTL GP Q
Sbjct: 76 GTLIGPPQ 83
>sp|VP6_ROTHG|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate RVC/Human/United
Query: 3 GTLFGPG 9
GT+F PG
Sbjct: 357 GTVFQPG 363
>sp|VP6_ROTHF|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate
Query: 3 GTLFGPG 9
GT+F PG
Sbjct: 357 GTVFQPG 363
>sp|VP6_ROTHC|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate RVC/Human/United
Query: 3 GTLFGPG 9
GT+F PG
Sbjct: 357 GTVFQPG 363
>sp|P30II_HTL1C|ACCESSORY protein p30II|Human T-cell leukemia virus 1
Query: 3 GTLFGP 8
GT+FGP
Sbjct: 191 GTMFGP 196
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 3 GTLFGPGQ 10
GT+ GP Q
Sbjct: 76 GTIIGPPQ 83
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 1 AHGTLFGPG 9
A G +FGPG
Sbjct: 1077 ASGRVFGPG 1085
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 3 GTLFGPGQ 10
GT+ GP Q
Sbjct: 76 GTIIGPPQ 83
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 HGTLFGPGQ 10
HG + PG+
Sbjct: 912 HGVYYDPGK 920
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 2 HGTLFG 7
H TLFG
Sbjct: 670 HATLFG 675
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 TLFGP 8
TLFGP
Sbjct: 1981 TLFGP 1985
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 TLFGP 8
TLFGP
Sbjct: 1981 TLFGP 1985
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 TLFGP 8
TLFGP
Sbjct: 1981 TLFGP 1985
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 TLFGP 8
TLFGP
Sbjct: 1981 TLFGP 1985
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 TLFGP 8
TLFGP
Sbjct: 1981 TLFGP 1985
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 HGTLFGPGQ 10
HG + PG+
Sbjct: 912 HGVYYDPGK 920
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 3 GTLFGPGQ 10
GT+ GP Q
Sbjct: 76 GTVIGPPQ 83
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 3 GTLFGPGQ 10
GT+ GP Q
Sbjct: 76 GTVIGPPQ 83
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 5 LFGPGQ 10
LFGPG+
Sbjct: 116 LFGPGR 121
>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)
Query: 1 AHGTLFGP 8
+HG+ F P
Sbjct: 319 SHGSSFNP 326
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 3 GTLFGPG 9
G FGPG
Sbjct: 146 GGTFGPG 152
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 3 GTLFGPGQ 10
GT+ GP Q
Sbjct: 76 GTITGPPQ 83
63|Sequence|311|320|FGPGQATRFF
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 FGPGQA 6
FGPGQA
Sbjct: 314 FGPGQA 319
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 1 FGPGQATRFF 10
FGPG +R F
Sbjct: 65 FGPGIYSRMF 74
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 3 PGQATRFF 10
PGQ FF
Sbjct: 1235 PGQGKSFF 1242
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 1 FGPGQATRFF 10
FGP TRF
Sbjct: 654 FGPYAGTRFL 663
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GPGQA 6
GPGQA
Sbjct: 314 GPGQA 318
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GPGQA 6
GPGQA
Sbjct: 308 GPGQA 312
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GPGQA 6
GPGQA
Sbjct: 308 GPGQA 312
>sp|NEF_HV1SE|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 FGPGQATRF 9
+ PG TRF
Sbjct: 128 YTPGPGTRF 136
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GPGQATR 8
GPG+A R
Sbjct: 307 GPGRAFR 313
64|Sequence|316|325|ATRFFPSPAQ
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 4 FFPSPA 9
FFPSPA
Sbjct: 757 FFPSPA 762
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 ATRFFPSP 8
A RF+P+P
Sbjct: 759 ACRFYPTP 766
>sp|VE6_HPV34|PROTEIN E6|Human papillomavirus type 34
Query: 4 FFPSPAQ 10
FFP+P +
Sbjct: 2 FFPNPEE 8
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 1 ATRFFPSPA 9
++ FFP+P+
Sbjct: 319 SSAFFPTPS 327
>sp|GO_HHV7J|GLYCOPROTEIN U47 homolog|Human herpesvirus 7 (strain JI)
Query: 2 TRFFPS 7
T+FFPS
Sbjct: 278 TKFFPS 283
65|Sequence|321|330|PSPAQEGAWE
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 2 SPAQEGAWE 10
SP+QEG E
Sbjct: 231 SPSQEGEGE 239
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 QEGAWE 10
EGAWE
Sbjct: 402 HEGAWE 407
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 QEGAWE 10
EGAWE
Sbjct: 402 HEGAWE 407
>sp|CEP1_HHV2H|CYTOPLASMIC envelopment protein 1|Human herpesvirus 2 (strain HG52)
Query: 1 PSPAQEG 7
P+PA EG
Sbjct: 4 PTPADEG 10
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 PSPAQEGAW 9
P PA AW
Sbjct: 366 PLPANTSAW 374
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 PSPAQEGAW 9
P PA AW
Sbjct: 365 PLPANTSAW 373
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 PSPAQEGAW 9
P PA AW
Sbjct: 365 PLPANTSAW 373
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 AQEGAWE 10
+ EGAW+
Sbjct: 226 SSEGAWK 232
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 PSPAQEGA 8
P P +EGA
Sbjct: 2664 PDPEKEGA 2671
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 AQEGAWE 10
+ EGAW+
Sbjct: 226 SSEGAWK 232
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 5 QEGAW 9
Q+GAW
Sbjct: 766 QDGAW 770
>sp|ICP27_HHV2H|MRNA export factor|Human herpesvirus 2 (strain HG52)
Query: 1 PSPAQEGAW 9
P PA G W
Sbjct: 97 PPPATTGVW 105
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 QEGAWE 10
QEG W+
Sbjct: 372 QEGTWD 377
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 QEGAWE 10
QEG W+
Sbjct: 372 QEGTWD 377
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 QEGAWE 10
QEG W+
Sbjct: 372 QEGTWD 377
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 AQEGAWE 10
+ EGAW+
Sbjct: 126 SSEGAWK 132
66|Sequence|326|335|EGAWESQGSS
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 EGAWE 5
EGAWE
Sbjct: 403 EGAWE 407
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 EGAWE 5
EGAWE
Sbjct: 403 EGAWE 407
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 1 EGAWESQ 7
+ WESQ
Sbjct: 26 QATWESQ 32
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 EGAWE 5
EGAWE
Sbjct: 32 EGAWE 36
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 EGAWE 5
EGAWE
Sbjct: 32 EGAWE 36
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 EGAWE 5
EGAWE
Sbjct: 32 EGAWE 36
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 EGAWE 5
EGAWE
Sbjct: 32 EGAWE 36
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 EGAWE 5
EGAWE
Sbjct: 32 EGAWE 36
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 EGAWES 6
EGAW+S
Sbjct: 41 EGAWDS 46
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 EGAWE 5
EGAWE
Sbjct: 32 EGAWE 36
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 EGAWES 6
EGAW+S
Sbjct: 41 EGAWDS 46
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 EGAWE 5
EGAWE
Sbjct: 32 EGAWE 36
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 EGAWE 5
EGAWE
Sbjct: 32 EGAWE 36
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 EGAWE 5
EGAWE
Sbjct: 32 EGAWE 36
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 EGAWES 6
EGAW S
Sbjct: 979 EGAWGS 984
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 1 EGAWES 6
EGAW S
Sbjct: 980 EGAWGS 985
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 1 EGAWES 6
EGAW S
Sbjct: 980 EGAWGS 985
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 1 EGAWES 6
EGAW S
Sbjct: 978 EGAWGS 983
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 2 GAWESQGSS 10
AW +QG +
Sbjct: 931 AAWSAQGGA 939
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 1 EGAWES 6
EGAW S
Sbjct: 979 EGAWGS 984
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 GAWESQGSS 10
AW +QG +
Sbjct: 931 AAWSAQGGA 939
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 1 EGAWES 6
EGAW S
Sbjct: 978 EGAWGS 983
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 1 EGAWES 6
EGAW S
Sbjct: 980 EGAWGS 985
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 EGAWES 6
EGAW S
Sbjct: 982 EGAWGS 987
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 1 EGAWES 6
EGAW S
Sbjct: 978 EGAWGS 983
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 2 GAWESQGSS 10
AW +QG +
Sbjct: 931 AAWSAQGGA 939
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 WESQGSS 10
W S+GS+
Sbjct: 233 WHSRGST 239
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 WESQGSS 10
W S+GS+
Sbjct: 233 WHSRGST 239
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 WESQGSS 10
W S+GS+
Sbjct: 233 WHSRGST 239
>sp|UNG_EBVB9|URACIL-DNA glycosylase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 AWESQG 8
AW SQG
Sbjct: 139 AWASQG 144
>sp|MATRX_MEASU|MATRIX protein|Measles virus (strain Hu2) (MeV)
Query: 1 EGAWESQGS 9
+ AW+ +GS
Sbjct: 9 KSAWDIKGS 17
>sp|MATRX_MEASE|MATRIX protein|Measles virus (strain Edmonston) (MeV)
Query: 1 EGAWESQGS 9
+ AW+ +GS
Sbjct: 9 KSAWDIKGS 17
>sp|MATRX_MEASC|MATRIX protein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 EGAWESQGS 9
+ AW+ +GS
Sbjct: 9 KSAWDIKGS 17
>sp|MATRX_MEASB|MATRIX protein|Measles virus (strain Biken) (MeV)
Query: 1 EGAWESQGS 9
+ AW+ +GS
Sbjct: 9 KSAWDIKGS 17
>sp|MATRX_MEASA|MATRIX protein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 EGAWESQGS 9
+ AW+ +GS
Sbjct: 9 KSAWDIKGS 17
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 EGAWESQGSS 10
E W S+GSS
Sbjct: 3004 EDHWASRGSS 3013
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 4 WESQGSS 10
W SQG +
Sbjct: 363 WSSQGKN 369
67|Sequence|331|340|SQGSSFPSQD
>sp|UL119_HCMVM|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 4 SSFPSQD 10
S+FPS D
Sbjct: 133 SAFPSND 139
>sp|TEGU_HCMV|TEGUMENT protein|Human cytomegalovirus (HHV-5) (Human herpesvirus
Query: 3 GSSFPSQ 9
G+SFP+Q
Sbjct: 276 GASFPTQ 282
>sp|NSP3_ROTGA|NON-STRUCTURAL protein 3|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 4 SSFPSQ 9
SSFPS+
Sbjct: 126 SSFPSE 131
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 SQGSSFPSQ 9
S+G FPS+
Sbjct: 3117 SEGIFFPSE 3125
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 4 SSFPSQ 9
+SFPSQ
Sbjct: 449 NSFPSQ 454
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 4 SSFPSQ 9
+SFPSQ
Sbjct: 449 NSFPSQ 454
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 4 SSFPSQ 9
+SFPSQ
Sbjct: 449 NSFPSQ 454
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 4 SSFPSQ 9
+SFPSQ
Sbjct: 449 NSFPSQ 454
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 SSFPSQ 9
+SFPSQ
Sbjct: 449 NSFPSQ 454
68|Sequence|336|345|FPSQDPVLGL
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 4 QDPVLG 9
QDP+LG
Sbjct: 2 QDPLLG 7
>sp|PG137_VACCC|PROTEIN OPG137|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PSQDPVLGL 10
P+Q P LG+
Sbjct: 136 PTQTPSLGV 144
>sp|PG137_VACCA|PROTEIN OPG137|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PSQDPVLGL 10
P+Q P LG+
Sbjct: 136 PTQTPSLGV 144
>sp|PG137_MONPV|PROTEIN OPG137|Monkeypox virus (MPXV)
Query: 2 PSQDPVLGL 10
P+Q P LG+
Sbjct: 136 PTQTPSLGV 144
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 FPSQDPVLGL 10
FP DP L +
Sbjct: 27 FPRTDPFLAM 36
>sp|PG137_VARV|PROTEIN OPG137|Variola virus
Query: 2 PSQDPVLGL 10
P+Q P LG+
Sbjct: 137 PTQTPSLGV 145
>sp|PG137_VAR67|PROTEIN OPG137|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 PSQDPVLGL 10
P+Q P LG+
Sbjct: 137 PTQTPSLGV 145
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 FPSQDPVLGL 10
FP DP L +
Sbjct: 27 FPRTDPFLAM 36
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 FPSQDPVLGL 10
FP DP L +
Sbjct: 27 FPRTDPFLAM 36
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 FPSQDPVLGL 10
FP DP L +
Sbjct: 27 FPRTDPFLAM 36
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 2 PSQDPVLG 9
PSQ+P+L
Sbjct: 185 PSQNPLLA 192
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 2 PSQDPVLG 9
PSQ+P+L
Sbjct: 185 PSQNPLLA 192
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 2 PSQDPVL 8
P QDP L
Sbjct: 557 PPQDPCL 563
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 2 PSQDPVL 8
P QDP L
Sbjct: 557 PPQDPCL 563
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 FPSQDPVLGL 10
FP DP L +
Sbjct: 27 FPRTDPFLAM 36
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 FPSQDPVLGL 10
FP DP L +
Sbjct: 27 FPRTDPFLAM 36
>sp|UL145_HCMVM|PROTEIN UL145|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FPSQDP 6
FP+ DP
Sbjct: 109 FPTSDP 114
>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 2 PSQDP 6
PSQDP
Sbjct: 481 PSQDP 485
>sp|PAX_I59A0|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 3 SQDPVLGL 10
SQ+P +GL
Sbjct: 207 SQEPCVGL 214
>sp|U21_HHV6Z|U21 glycoprotein|Human herpesvirus 6B (strain Z29)
Query: 1 FPSQDPVLG 9
+PS P LG
Sbjct: 19 YPSTCPALG 27
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 QDPVLG 9
+DP+LG
Sbjct: 1041 KDPILG 1046
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 PSQDPVL 8
PSQDP +
Sbjct: 1618 PSQDPFV 1624
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 PSQDP 6
PSQDP
Sbjct: 1621 PSQDP 1625
69|Sequence|341|350|PVLGLREPAR
>sp|VL2_HPV31|MINOR capsid protein L2|Human papillomavirus 31
Query: 1 PVLGLREPAR 10
P+ G+R PAR
Sbjct: 210 PIPGVRRPAR 219
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 VLGLRE 7
VLGLRE
Sbjct: 187 VLGLRE 192
70|Sequence|346|355|REPARPERDM
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 REPARPER 8
REP RPER
Sbjct: 725 REPDRPER 732
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 3 PARPERD 9
P RP+RD
Sbjct: 645 PKRPKRD 651
>sp|REX_HTL1F|PROTEIN Rex|Human T-cell leukemia virus 1
Query: 1 REPARPERDM 10
REP RP R +
Sbjct: 100 REPLRPSRSL 109
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 REPARP 6
REP RP
Sbjct: 715 REPDRP 720
>sp|TRX2_HCMVM|TRIPLEX capsid protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 REPARPE 7
R PARP+
Sbjct: 251 RTPARPQ 257
>sp|TRX2_HCMVA|TRIPLEX capsid protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 REPARPE 7
R PARP+
Sbjct: 251 RTPARPQ 257
>sp|REX_HTL1C|PROTEIN Rex|Human T-cell leukemia virus 1
Query: 1 REPARPERDM 10
REP RP R +
Sbjct: 100 REPLRPLRSL 109
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 1 REPARP 6
R+PARP
Sbjct: 77 RQPARP 82
>sp|REX_HTL1L|PROTEIN Rex|Human T-cell leukemia virus 1
Query: 1 REPARPERDM 10
REP +P R +
Sbjct: 100 REPLKPSRSL 109
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 4 ARPERD 9
ARP RD
Sbjct: 3091 ARPSRD 3096
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 REPARP 6
R+PARP
Sbjct: 77 RQPARP 82
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 4 ARPERD 9
ARP RD
Sbjct: 3093 ARPSRD 3098
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 REPARP 6
R+PARP
Sbjct: 77 RQPARP 82
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 REPARP 6
R+PARP
Sbjct: 77 RQPARP 82
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 REPARP 6
R+PARP
Sbjct: 77 RQPARP 82
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 3 PARPERD 9
PARP+R+
Sbjct: 378 PARPDRE 384
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 EPARPE 7
EP RPE
Sbjct: 1063 EPLRPE 1068
>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)
Query: 2 EPARPERDM 10
EP++PE M
Sbjct: 107 EPSQPEMGM 115
>sp|ORF11_TTVV3|ORF1/1 protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 3 PARPERD 9
P RP+RD
Sbjct: 108 PKRPKRD 114
71|Sequence|351|360|PERDMGELSP
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 1 PERDMGELSP 10
PE+ + ELSP
Sbjct: 79 PEKQISELSP 88
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 1 PERDMGELSP 10
PE+ + ELSP
Sbjct: 83 PEQAVAELSP 92
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 1 PERDMGELSP 10
PE+ + ELSP
Sbjct: 85 PEQAVAELSP 94
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 5 MGELSP 10
MGELSP
Sbjct: 1 MGELSP 6
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 5 MGELSP 10
MGELSP
Sbjct: 1 MGELSP 6
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 5 MGELSP 10
MGELSP
Sbjct: 1 MGELSP 6
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 3 RDMGELSP 10
RD+ ELSP
Sbjct: 98 RDVAELSP 105
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 ERDMGELSP 10
+RD ELSP
Sbjct: 656 DRDRAELSP 664
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 2 ERDMGELSP 10
+RD ELSP
Sbjct: 656 DRDRSELSP 664
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 ERDMGELSP 10
+RD ELSP
Sbjct: 656 DRDRAELSP 664
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 ERDMGELSP 10
+RD ELSP
Sbjct: 657 DRDRAELSP 665
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ERDMGELSP 10
+RD ELSP
Sbjct: 656 DRDRSELSP 664
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 ERDMGELSP 10
+RD ELSP
Sbjct: 656 DRDRSELSP 664
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ERDMGELSP 10
+RD ELSP
Sbjct: 656 DRDRSELSP 664
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 ERDMGELSP 10
+RD ELSP
Sbjct: 657 DRDRAELSP 665
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 ERDMGELSP 10
+RD ELSP
Sbjct: 656 DRDRSELSP 664
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ERDMGELSP 10
+RD ELSP
Sbjct: 656 DRDRSELSP 664
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ERDMGELSP 10
+RD ELSP
Sbjct: 656 DRDRSELSP 664
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ERDMGELSP 10
+RD ELSP
Sbjct: 656 DRDRSELSP 664
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ERDMGELSP 10
+RD ELSP
Sbjct: 656 DRDRSELSP 664
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ERDMGELSP 10
+RD ELSP
Sbjct: 656 DRDRPELSP 664
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 ERDMGELSP 10
+RD GEL P
Sbjct: 1188 KRDSGELLP 1196
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 ERDMGELSP 10
+RD GEL P
Sbjct: 1187 KRDSGELLP 1195
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 1 PERDMGELS 9
PER MG S
Sbjct: 18 PERGMGSAS 26
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 2 ERDMGELSP 10
+RD +LSP
Sbjct: 660 DRDRSQLSP 668
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 PERDMGELSP 10
ER+ G L+P
Sbjct: 1449 AERNQGRLNP 1458
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 ERDMGELSP 10
+RD +LSP
Sbjct: 660 DRDRSQLSP 668
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 ERDMGELSP 10
+RD +LSP
Sbjct: 660 DRDRSQLSP 668
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ERDMGELSP 10
+RD ELSP
Sbjct: 656 DRDRLELSP 664
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 ERDMGELSP 10
+RD +LSP
Sbjct: 660 DRDRSQLSP 668
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 ERDMGELSP 10
+RD +LSP
Sbjct: 660 DRDRSQLSP 668
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 RDMGELSP 10
RD ELSP
Sbjct: 657 RDRVELSP 664
72|Sequence|356|365|GELSPAVAQE
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 3 LSPAVAQE 10
LSP ++QE
Sbjct: 739 LSPGLSQE 746
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 3 LSPAVAQE 10
LSP ++QE
Sbjct: 739 LSPGLSQE 746
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 3 LSPAVAQE 10
LSP ++QE
Sbjct: 739 LSPGLSQE 746
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 3 LSPAVAQE 10
LSP ++QE
Sbjct: 739 LSPGLSQE 746
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 3 LSPAVAQE 10
LSP ++QE
Sbjct: 739 LSPGLSQE 746
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 3 LSPAVAQE 10
LSP ++QE
Sbjct: 739 LSPGLSQE 746
>sp|TRX2_VZVD|TRIPLEX capsid protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GELSPA 6
GELSPA
Sbjct: 13 GELSPA 18
>sp|TEGU_HCMV|TEGUMENT protein|Human cytomegalovirus (HHV-5) (Human herpesvirus
Query: 1 GELSPAVAQ 9
G+LSP+ A+
Sbjct: 57 GDLSPSFAR 65
>sp|CAP9_ADE07|HEXON-INTERLACING protein IX|Human adenovirus B serotype 7
Query: 1 GELSPAVAQ 9
GELS VAQ
Sbjct: 115 GELSKQVAQ 123
>sp|CAP9_ADE03|HEXON-INTERLACING protein IX|Human adenovirus B serotype 3
Query: 1 GELSPAVAQ 9
GELS VAQ
Sbjct: 115 GELSKQVAQ 123
73|Sequence|361|370|AVAQEETPPG
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 1 AVAQEETPPG 10
A + E+TPP
Sbjct: 732 AASNEQTPPA 741
>sp|GI_VZVO|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Oka vaccine)
Query: 1 AVAQEETPP 9
A +EE+PP
Sbjct: 337 ATIREESPP 345
>sp|GI_VZVD|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 AVAQEETPP 9
A +EE+PP
Sbjct: 337 ATIREESPP 345
>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)
Query: 3 AQEETPPG 10
AQ+ PPG
Sbjct: 274 AQDSAPPG 281
>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)
Query: 3 AQEETPPG 10
AQ+ PPG
Sbjct: 274 AQDSAPPG 281
74|Sequence|366|375|ETPPGDWLFG
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 TPPGDWLF 9
TPP DWL+
Sbjct: 93 TPPEDWLY 100
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 5 GDWLFG 10
G WLFG
Sbjct: 1951 GSWLFG 1956
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 5 GDWLFG 10
G WLFG
Sbjct: 1950 GSWLFG 1955
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 5 GDWLFG 10
G WLFG
Sbjct: 1950 GSWLFG 1955
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 PGDWLF 9
PGDW+
Sbjct: 2254 PGDWVL 2259
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 ETPPGDWL 8
+ PP DWL
Sbjct: 1254 QAPPFDWL 1261
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 3 PPGDWL 8
PPGD+L
Sbjct: 440 PPGDYL 445
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 3 PPGDWL 8
PPGD+L
Sbjct: 440 PPGDYL 445
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 3 PPGDWL 8
PPGD+L
Sbjct: 106 PPGDYL 111
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 2 TPPGDWL 8
TPP WL
Sbjct: 538 TPPSPWL 544
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 6 DWLFG 10
+WLFG
Sbjct: 132 EWLFG 136
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 6 DWLFG 10
+WLFG
Sbjct: 132 EWLFG 136
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 6 DWLFG 10
+WLFG
Sbjct: 132 EWLFG 136
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 1 ETPPGD 6
+TPP D
Sbjct: 737 QTPPAD 742
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 1 ETPPGDW 7
E PGDW
Sbjct: 194 ELSPGDW 200
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ETPPGDW 7
+T P DW
Sbjct: 172 QTTPHDW 178
>sp|NCAP_PUUMU|NUCLEOPROTEIN virus (strain Udmurtia/894CG/91)
Query: 1 ETPPGDWLFG 10
E+P W+F
Sbjct: 304 ESPNAPWVFA 313
>sp|NCAP_PUUMP|NUCLEOPROTEIN virus (strain P360)
Query: 1 ETPPGDWLFG 10
E+P W+F
Sbjct: 304 ESPNAPWVFA 313
>sp|NCAP_PUUMG|NUCLEOPROTEIN virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 ETPPGDWLFG 10
E+P W+F
Sbjct: 304 ESPNAPWVFA 313
>sp|NCAP_HANTV|NUCLEOPROTEIN virus (strain 76-118) (Korean
Query: 1 ETPPGDWLFG 10
E+P W+F
Sbjct: 300 ESPSSIWVFA 309
>sp|NCAP_SEOUS|NUCLEOPROTEIN virus (strain SR-11) (Sapporo
Query: 1 ETPPGDWLFG 10
E+P W+F
Sbjct: 300 ESPSSIWVFA 309
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PPGDW 7
PPG W
Sbjct: 11 PPGGW 15
>sp|IE247_HCMVT|45 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 1 ETPPGD 6
ETPP D
Sbjct: 385 ETPPED 390
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 TPPGDWL 8
+PP +WL
Sbjct: 1298 SPPMNWL 1304
>sp|NCAP_PUUMB|NUCLEOPROTEIN virus (strain Berkel)
Query: 1 ETPPGDWLFG 10
E+P W+F
Sbjct: 261 ESPNAPWVFA 270
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ETPPGDWL 8
ET P WL
Sbjct: 253 ETQPSTWL 260
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 ETPPGDWL 8
+TP +WL
Sbjct: 489 DTPATNWL 496
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 3 PPGDWL 8
PP +WL
Sbjct: 339 PPFNWL 344
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 5 GDWL 8
GDWL
Sbjct: 528 GDWL 531
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 3 PPGDWL 8
PP +WL
Sbjct: 340 PPFNWL 345
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 3 PPGDWL 8
PP +WL
Sbjct: 340 PPFNWL 345
>sp|VIE2_HCMVM|VIRAL transcription factor IE2|Human cytomegalovirus (strain Merlin)
Query: 1 ETPPGD 6
ETPP D
Sbjct: 555 ETPPED 560
>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain
Query: 6 DWLFG 10
+W+FG
Sbjct: 129 EWIFG 133
>sp|VIE2_HCMVT|VIRAL transcription factor IE2|Human cytomegalovirus (strain Towne)
Query: 1 ETPPGD 6
ETPP D
Sbjct: 554 ETPPED 559
>sp|VIE2_HCMVA|VIRAL transcription factor IE2|Human cytomegalovirus (strain AD169)
Query: 1 ETPPGD 6
ETPP D
Sbjct: 555 ETPPED 560
>sp|NCAP_SARS2|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 2 TPPGDWL 8
TP G WL
Sbjct: 325 TPSGTWL 331
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 3 PPGDWL 8
PP +WL
Sbjct: 340 PPFNWL 345
>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)
Query: 3 PPGDWL 8
PP +WL
Sbjct: 342 PPFNWL 347
>sp|NCAP_SARS|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 2 TPPGDWL 8
TP G WL
Sbjct: 326 TPSGTWL 332
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 ETPPGDW 7
+TP DW
Sbjct: 301 DTPWSDW 307
>sp|VEMP_MERS1|ENVELOPE small membrane protein|Middle East respiratory syndrome-related
Query: 3 PPGDWL 8
PP +W+
Sbjct: 77 PPDEWV 82
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ETPPGDW 7
+TP DW
Sbjct: 301 DTPWSDW 307
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 ETPPGDW 7
+TP DW
Sbjct: 301 DTPWSDW 307
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 3 PPGDWL 8
PP +WL
Sbjct: 340 PPFNWL 345
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 3 PPGDWL 8
PP +WL
Sbjct: 340 PPFNWL 345
75|Sequence|371|380|DWLFGGVRWG
>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)
Query: 1 DWLFGGVRW 9
+W FGG W
Sbjct: 94 EWQFGGQGW 102
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 DWLFGGVRW 9
DW+ VRW
Sbjct: 154 DWVVERVRW 162
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 1 DWLFGGVR 8
D +FGGVR
Sbjct: 89 DRVFGGVR 96
>sp|MB43_VZVO|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 FGGVRWG 10
F G+ WG
Sbjct: 343 FAGISWG 349
>sp|MB43_VZVD|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 FGGVRWG 10
F G+ WG
Sbjct: 343 FAGISWG 349
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 LFGGVRW 9
+FGGV W
Sbjct: 726 MFGGVSW 732
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 LFGGVRW 9
+FGGV W
Sbjct: 726 MFGGVSW 732
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 LFGGVRW 9
+FGGV W
Sbjct: 726 MFGGVSW 732
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 LFGGVRW 9
+FGGV W
Sbjct: 726 MFGGVSW 732
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 LFGGVRW 9
+FGGV W
Sbjct: 726 MFGGVSW 732
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 DWLFGGVRW 9
DW+ +RW
Sbjct: 154 DWVIERMRW 162
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 DWLFGGV 7
DW F G+
Sbjct: 290 DWTFAGI 296
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 DWLFGG 6
+W+FGG
Sbjct: 215 EWVFGG 220
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 DWLFGG 6
+W+FGG
Sbjct: 215 EWVFGG 220
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 DWLFGG 6
+W+FGG
Sbjct: 215 EWVFGG 220
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 730 LFGGLNW 736
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 730 LFGGLNW 736
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 730 LFGGLNW 736
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 730 LFGGLNW 736
>sp|NS1_I03A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 DWLFGGVRW 9
D L GG+ W
Sbjct: 174 DVLIGGLEW 182
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 730 LFGGLSW 736
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 730 LFGGLSW 736
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 730 LFGGLSW 736
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 730 LFGGLSW 736
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 730 LFGGLSW 736
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 745 LFGGMSW 751
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 746 LFGGMSW 752
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 741 LFGGMSW 747
>sp|NS1_I77A9|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/New
Query: 3 LFGGVRW 9
L GG++W
Sbjct: 181 LIGGLKW 187
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 738 LFGGMSW 744
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 745 LFGGMSW 751
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 746 LFGGMSW 752
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 746 LFGGMSW 752
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 739 LFGGMSW 745
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 746 LFGGMSW 752
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 730 LFGGLSW 736
>sp|NS1_I73A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/London/1416/1973
Query: 3 LFGGVRW 9
L GG++W
Sbjct: 181 LIGGLKW 187
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 738 LFGGMSW 744
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 743 LFGGMSW 749
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 739 LFGGMSW 745
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 743 LFGGMSW 749
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 746 LFGGMSW 752
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 746 LFGGMSW 752
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 742 LFGGMSW 748
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 745 LFGGMSW 751
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 746 LFGGMSW 752
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 746 LFGGMSW 752
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 746 LFGGMSW 752
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 740 LFGGMSW 746
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 746 LFGGMSW 752
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 3 LFGGVRW 9
LFGG+ W
Sbjct: 674 LFGGMSW 680
>sp|US30_HCMVA|UNCHARACTERIZED protein HHRF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 GGVRWG 10
GG+RW
Sbjct: 146 GGIRWA 151
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 4 FGGVRWG 10
F GVR+G
Sbjct: 443 FAGVRFG 449
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 1 DWLFGGVRW 9
D+ GG RW
Sbjct: 231 DFRVGGTRW 239
>sp|US30_HCMVM|UNCHARACTERIZED protein US30|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 GGVRWG 10
GG+RW
Sbjct: 146 GGIRWA 151
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 DWLFGGVRW 9
D+ GG RW
Sbjct: 231 DFRVGGTRW 239
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 1 DWLFGGVRW 9
D+ GG RW
Sbjct: 231 DFRVGGTRW 239
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 1 DWLFGGVRW 9
D+ GG RW
Sbjct: 231 DFRVGGTRW 239
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 1 DWLFGGVRW 9
D+ GG RW
Sbjct: 231 DFRVGGTRW 239
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 1 DWLFGGVRW 9
D+ GG RW
Sbjct: 231 DFRVGGTRW 239
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 1 DWLFGGVRW 9
D+ GG RW
Sbjct: 231 DFRVGGTRW 239
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 1 DWLFGGVRW 9
D+ GG RW
Sbjct: 231 DFRVGGTRW 239
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 1 DWLFGGVRW 9
D+ GG RW
Sbjct: 231 DFRVGGTRW 239
>sp|LANA1_HHV8P|PROTEIN LANA1|Human herpesvirus 8 type P
Query: 2 WLFGGVRWG 10
W F + WG
Sbjct: 1021 WKFAVIFWG 1029
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 DWLFGGVRW 9
DW G + W
Sbjct: 1144 DWFSGLMSW 1152
Query: 2 WLFGGVRW 9
W+ +RW
Sbjct: 623 WITAFIRW 630
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 DWLFGGVRW 9
DW G + W
Sbjct: 1144 DWFSGLMSW 1152
Query: 2 WLFGGVRW 9
W+ +RW
Sbjct: 623 WITAFIRW 630
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 LFGGVRW 9
LF GV W
Sbjct: 727 LFSGVSW 733
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 LFGGVRW 9
LF GV W
Sbjct: 727 LFSGVSW 733
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 1 DWLFGGV 7
DW GG+
Sbjct: 73 DWSLGGI 79
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LFGGVRWG 10
+ GG WG
Sbjct: 347 MVGGAHWG 354
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 LFGGVRWG 10
+ GG WG
Sbjct: 347 IIGGAHWG 354
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 1 DWLFGGV 7
DW GG+
Sbjct: 73 DWSLGGI 79
>sp|NS1_I83A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chile/1/1983
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I80AA|NON-STRUCTURAL protein 1|Influenza A virus (strain A/India/6263/1980
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I77AB|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USSR/90/1977
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I77AA|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Brazil/11/1978
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I68A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Korea/426/1968
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I57A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I57A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I57A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/1957
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I57A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Japan/305/1957
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I54A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I51A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Albany/12/1951
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I50A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Fort
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I02A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 159 LIGGLEW 165
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 DWLFGGV 7
DW GG+
Sbjct: 73 DWSLGGI 79
>sp|NS1_I83A8|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I47A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Fort
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I40A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hickox/1940
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 1 DWLFGGV 7
DW GG+
Sbjct: 73 DWSIGGI 79
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 LFGGVRW 9
+FGG+ W
Sbjct: 715 IFGGLSW 721
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 LFGGVRW 9
+FGG+ W
Sbjct: 722 IFGGLSW 728
>sp|NS1_I97A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I97A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I89A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Beijing/352/1989
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I82A8|NON-STRUCTURAL protein 1|Influenza A virus (strain
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I72A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Udorn/307/1972
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I71A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/1/1971
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I70A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Qu/7/1970
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 LFGGVRW 9
LF GV W
Sbjct: 725 LFSGVSW 731
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 LFGGVRW 9
LF GV W
Sbjct: 725 LFSGVSW 731
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 LFGGVRW 9
LF GV W
Sbjct: 725 LFSGVSW 731
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 LFGGVRW 9
LF GV W
Sbjct: 725 LFSGVSW 731
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 LFGGVRW 9
LF GV W
Sbjct: 725 LFSGVSW 731
>sp|NS1_I56A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I68A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I59A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I33A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Wilson-Smith/1933
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I30A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I96A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I96A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I80A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/4/1980
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I77A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I75A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Beijing/39/1975
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I68A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Aichi/2/1968
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I54A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/1/1954
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I43A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Iowa/1943
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 175 LIGGLEW 181
>sp|NS1_I36A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Henry/1936
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I34A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Puerto
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I24A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Japan/1924
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 178 LIGGLEW 184
>sp|NS1_I18A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Brevig
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I06A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I02A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I00A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Duck/Hong
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 176 LIGGLEW 182
>sp|NS1_I000X|NON-STRUCTURAL protein 1|Influenza A virus (strain A/X-31
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I85A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I80A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I78A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I76A6|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/110/1976
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I73A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Port
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I45A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 LFGGVRW 9
LF GV W
Sbjct: 727 LFSGVSW 733
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 LFGGVRW 9
LF GV W
Sbjct: 727 LFSGVSW 733
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 LFGGVRW 9
LF GV W
Sbjct: 726 LFSGVSW 732
>sp|NS1_I78A8|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/18/1978
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I78A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/2/1978
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I78A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I77A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Alaska/6/1977
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I69A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/England/878/1969
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I67A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Tokyo/3/1967
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I35A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Phila/1935
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I01A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 176 LIGGLEW 182
>sp|NS1_I02A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Guinea
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I96A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I72A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/101/1972
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I72A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/102/1972
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I02A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I02A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I00A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/New
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I60A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Ann
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I07A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NS1_I02A6|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 176 LIGGLEW 182
>sp|NS1_I02A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 176 LIGGLEW 182
>sp|NS1_I02A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 DWLFGGVRW 9
DW +RW
Sbjct: 158 DWTTERLRW 166
>sp|NS1_I01A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 176 LIGGLEW 182
>sp|NS1_I01A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 176 LIGGLEW 182
>sp|NS1_I01A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 176 LIGGLEW 182
>sp|NS1_I05A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 172 LIGGLEW 178
>sp|NS1_I03A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 176 LIGGLEW 182
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 1 DWLFGG 6
DW +GG
Sbjct: 567 DWKWGG 572
>sp|NS1_I57A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Singapore/1/1957
Query: 3 LFGGVRW 9
L GG+ W
Sbjct: 181 LIGGLEW 187
>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain
Query: 1 DWLFG 5
+W+FG
Sbjct: 129 EWIFG 133
>sp|NSS_HTRV|NON-STRUCTURAL protein NS-S|Heartland virus (HTRV)
Query: 2 WLFG 5
WLFG
Sbjct: 61 WLFG 64
76|Sequence|376|385|GVRWGWNFRC
>sp|NP03_HHV2H|NUCLEAR phosphoprotein UL3|Human herpesvirus 2 (strain HG52)
Query: 4 WGWNF 8
WGW F
Sbjct: 30 WGWTF 34
>sp|NP03_HHV23|NUCLEAR phosphoprotein UL3|Human herpesvirus 2 (strain 333)
Query: 4 WGWNF 8
WGW F
Sbjct: 30 WGWTF 34
>sp|NP03_HHV1F|NUCLEAR phosphoprotein UL3|Human herpesvirus 1 (strain F)
Query: 4 WGWNF 8
WGW F
Sbjct: 30 WGWTF 34
>sp|NP03_HHV11|NUCLEAR phosphoprotein UL3|Human herpesvirus 1 (strain 17)
Query: 4 WGWNF 8
WGW F
Sbjct: 30 WGWTF 34
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 RWGWNF 8
RW WNF
Sbjct: 2901 RWMWNF 2906
>sp|VU26_HHV6U|PROTEIN U26|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 VRWGWNFR 9
VR+GW R
Sbjct: 145 VRYGWMIR 152
>sp|VU26_HHV6G|PROTEIN U26|Human herpesvirus 6A (strain GS)
Query: 2 VRWGWNFR 9
VR+GW R
Sbjct: 145 VRYGWMIR 152
>sp|ETF1_YMTV5|EARLY transcription factor 70 kDa|Yaba monkey tumor virus (strain
Query: 4 WGWNFR 9
WG NFR
Sbjct: 621 WGVNFR 626
>sp|ETF1_VARV|EARLY transcription factor 70 kDa|Variola virus
Query: 4 WGWNFR 9
WG NFR
Sbjct: 623 WGVNFR 628
>sp|ETF1_VAR67|EARLY transcription factor 70 kDa|Variola virus (isolate
Query: 4 WGWNFR 9
WG NFR
Sbjct: 623 WGVNFR 628
>sp|ETF1_VACCT|EARLY transcription factor 70 kDa|Vaccinia virus (strain Tian Tan)
Query: 4 WGWNFR 9
WG NFR
Sbjct: 623 WGVNFR 628
>sp|ETF1_VACCC|EARLY transcription factor 70 kDa|Vaccinia virus (strain Copenhagen)
Query: 4 WGWNFR 9
WG NFR
Sbjct: 623 WGVNFR 628
>sp|ETF1_VACCA|EARLY transcription factor 70 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 4 WGWNFR 9
WG NFR
Sbjct: 623 WGVNFR 628
>sp|ETF1_MONPV|EARLY transcription factor 70 kDa|Monkeypox virus (MPXV)
Query: 4 WGWNFR 9
WG NFR
Sbjct: 623 WGVNFR 628
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 3 RWGWN 7
RW WN
Sbjct: 227 RWPWN 231
>sp|UL120_HCMVA|UNCHARACTERIZED protein UL120|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 WGWNFR 9
W W FR
Sbjct: 192 WSWTFR 197
>sp|SPIKE_ADE07|FIBER protein|Human adenovirus B serotype 7
Query: 2 VRWGWN 7
V W WN
Sbjct: 310 VTWSWN 315
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 3 RWGWNF 8
RWG+N
Sbjct: 588 RWGYNL 593
>sp|NP03_VZVO|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Oka
Query: 2 VRWGW 6
++WGW
Sbjct: 14 LQWGW 18
>sp|NP03_VZVD|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Dumas)
Query: 2 VRWGW 6
++WGW
Sbjct: 14 LQWGW 18
>sp|DR6_HHV6Z|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6B (strain Z29)
Query: 1 GVRWGW 6
G RWGW
Sbjct: 83 GHRWGW 88
>sp|DR6_HHV6U|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6A (strain
Query: 1 GVRWGW 6
G RWGW
Sbjct: 83 GHRWGW 88
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 3 RWGWNF 8
RWG+N
Sbjct: 588 RWGYNL 593
>sp|UL120_HCMVM|MEMBRANE protein UL120|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 WGWNFR 9
W W FR
Sbjct: 192 WSWTFR 197
>sp|SPIKE_ADE1P|FIBER protein|Human adenovirus B serotype 11
Query: 2 VRWGWN 7
+ W WN
Sbjct: 292 ITWSWN 297
>sp|SPIKE_ADE1A|FIBER protein|Human adenovirus B serotype 11
Query: 2 VRWGWN 7
+ W WN
Sbjct: 292 ITWSWN 297
>sp|M2_I02A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 3 RWGWNFRC 10
R GW RC
Sbjct: 12 RNGWECRC 19
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 4 WGWNFR 9
+ WNFR
Sbjct: 554 YEWNFR 559
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 4 WGWNFR 9
+ WNFR
Sbjct: 552 YEWNFR 557
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 4 WGWNFR 9
+ WNFR
Sbjct: 548 YEWNFR 553
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 4 WGWNFR 9
+ WNFR
Sbjct: 572 YEWNFR 577
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 4 WGWNFR 9
+ WNFR
Sbjct: 566 YEWNFR 571
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 4 WGWNFR 9
+ WNFR
Sbjct: 581 YEWNFR 586
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 4 WGWNFR 9
+ WNFR
Sbjct: 573 YEWNFR 578
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 4 WGWNFR 9
+ WNFR
Sbjct: 597 YEWNFR 602
>sp|M2_I59A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 3 RWGWNFRC 10
R GW RC
Sbjct: 12 RNGWECRC 19
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 RWGWNF 8
RWGW +
Sbjct: 12 RWGWKW 17
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 4 WGWNFR 9
+ WNFR
Sbjct: 499 YEWNFR 504
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 RWGWNF 8
RWGW +
Sbjct: 12 RWGWRW 17
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 RWGWNF 8
RWGW +
Sbjct: 12 RWGWRW 17
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 RWGWNF 8
RWGW +
Sbjct: 12 RWGWKW 17
>sp|M2_I02A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 RWGWNFRC 10
R GW RC
Sbjct: 12 RNGWECRC 19
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 RWGWNF 8
RWGW +
Sbjct: 12 RWGWRW 17
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 RWGWNF 8
RWGW +
Sbjct: 12 RWGWRW 17
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 RWGWNF 8
RWGW +
Sbjct: 12 RWGWRW 17
>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31
Query: 4 WGWNFR 9
+ WNFR
Sbjct: 450 YEWNFR 455
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 RWGWNFRC 10
R GW++ C
Sbjct: 2572 RGGWSYTC 2579
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 2 VRWGW 6
+ WGW
Sbjct: 423 ITWGW 427
>sp|M2_I97A1|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 3 RWGWNFRC 10
R GW RC
Sbjct: 12 RNGWGCRC 19
>sp|M2_I97A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 RWGWNFRC 10
R GW RC
Sbjct: 12 RNGWGCRC 19
>sp|M2_I56A3|MATRIX protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 2 VRWGWNFRC 10
++ GW RC
Sbjct: 11 IKSGWECRC 19
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VRWGWNFRC 10
V W NF C
Sbjct: 682 VYWTTNFPC 690
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VRWGWNFRC 10
V W NF C
Sbjct: 682 VYWTTNFPC 690
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 1 GVRWG 5
G+RWG
Sbjct: 213 GLRWG 217
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVRWGWNFRC 10
G++ GW F C
Sbjct: 2 GMQSGWPFFC 11
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 GVRWGWNF 8
GV W W F
Sbjct: 96 GVDWTWIF 103
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 VRWGWNF 8
V W W F
Sbjct: 145 VGWWWKF 151
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 RWGWNF 8
RW W F
Sbjct: 2870 RWLWGF 2875
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 RWGWNF 8
RW W F
Sbjct: 2871 RWLWGF 2876
>sp|VE6_HPV38|PROTEIN E6|Human papillomavirus 38
Query: 2 VRWGWNFRC 10
VR W RC
Sbjct: 126 VRGNWKGRC 134
>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30
Query: 2 VRWGWNFRC 10
V W W + C
Sbjct: 132 VVWQWVYYC 140
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 GVRWGWNFRC 10
G+ WG F C
Sbjct: 765 GLLWGLIFIC 774
>sp|LAP_YMTV5|E3 ubiquitin-protein ligase LAP|Yaba monkey tumor virus (strain
Query: 3 RWGWNF 8
RW W F
Sbjct: 63 RWKWCF 68
>sp|VE2_HPV53|REGULATORY protein E2|Human papillomavirus type 53
Query: 2 VRWGWNFRC 10
V W W + C
Sbjct: 132 VVWKWVYYC 140
77|Sequence|381|390|WNFRCKPPVG
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 1 WNFRCKPP 8
WNF+ PP
Sbjct: 401 WNFKIAPP 408
Query: 5 CKPPVG 10
C PP+G
Sbjct: 159 CTPPIG 164
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 5 CKPPVG 10
CKPP+G
Sbjct: 175 CKPPIG 180
Query: 1 WNFRCKPP 8
WNF PP
Sbjct: 413 WNFGVPPP 420
>sp|UNG_HHV6Z|URACIL-DNA glycosylase|Human herpesvirus 6B (strain Z29)
Query: 1 WNFRCKP 7
W+F CKP
Sbjct: 76 WSFLCKP 82
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 5 CKPPVG 10
CKPP+G
Sbjct: 174 CKPPIG 179
Query: 1 WNFRCKPP 8
WNF PP
Sbjct: 412 WNFGVPPP 419
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 1 WNFRCKPP 8
WNF+ PP
Sbjct: 401 WNFKIGPP 408
Query: 5 CKPPVG 10
C PP+G
Sbjct: 159 CTPPIG 164
>sp|UNG_HHV6U|URACIL-DNA glycosylase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 WNFRCKP 7
W+F CKP
Sbjct: 76 WSFLCKP 82
>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62
Query: 5 CKPPVG 10
CKPP+G
Sbjct: 160 CKPPIG 165
Query: 1 WNFRCKPP 8
WNF PP
Sbjct: 402 WNFGVLPP 409
>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61
Query: 5 CKPPVG 10
CKPP+G
Sbjct: 162 CKPPIG 167
Query: 1 WNFRCKPP 8
WNF PP
Sbjct: 403 WNFGVVPP 410
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 1 WNFRCKPPVG 10
WNF +PP G
Sbjct: 402 WNFGLQPPPG 411
Query: 5 CKPPVG 10
CKPP+G
Sbjct: 161 CKPPIG 166
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 5 CKPPVG 10
CKPP+G
Sbjct: 190 CKPPIG 195
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 1 WNFRCKPP 8
WNF PP
Sbjct: 429 WNFGVSPP 436
Query: 5 CKPPVG 10
C PP+G
Sbjct: 187 CTPPMG 192
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 5 CKPPVG 10
CKPP+G
Sbjct: 162 CKPPIG 167
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 5 CKPPVG 10
CKPP+G
Sbjct: 186 CKPPLG 191
Query: 1 WNFRCKPP 8
WNF PP
Sbjct: 427 WNFGLTPP 434
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 5 CKPPVG 10
C+PP+G
Sbjct: 161 CRPPIG 166
Query: 1 WNFRCKPP 8
WNF PP
Sbjct: 400 WNFGLTPP 407
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 1 WNFRCKPP 8
WNF PP
Sbjct: 402 WNFAVAPP 409
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 1 WNFRCKP 7
W F C+P
Sbjct: 306 WVFACRP 312
>sp|UL58_HCMVA|UNCHARACTERIZED protein UL58|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 NFRCKPP 8
+FRC PP
Sbjct: 29 DFRCAPP 35
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 1 WNFRCKPP 8
WNF PP
Sbjct: 397 WNFGLSPP 404
Query: 5 CKPPVG 10
C PP+G
Sbjct: 158 CAPPLG 163
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 1 WNFRCKPP 8
WNF PP
Sbjct: 395 WNFGITPP 402
Query: 5 CKPPVG 10
C PP+G
Sbjct: 157 CTPPIG 162
>sp|VL1_HPV64|MAJOR capsid protein L1|Human papillomavirus type 64
Query: 1 WNFRCKPP 8
WNF PP
Sbjct: 89 WNFGLTPP 96
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 1 WNFRCKPP 8
WNF PP
Sbjct: 398 WNFGLSPP 405
Query: 5 CKPPVG 10
C PP+G
Sbjct: 158 CAPPLG 163
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 1 WNFRCKPP 8
WNF PP
Sbjct: 399 WNFGLSPP 406
Query: 5 CKPPVG 10
C PP+G
Sbjct: 158 CAPPLG 163
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 5 CKPPVG 10
CKPP G
Sbjct: 162 CKPPTG 167
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 1 WNFRCKPP 8
WNF PP
Sbjct: 507 WNFGVPPP 514
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 2 NFRCKPP 8
N RCK P
Sbjct: 1404 NVRCKTP 1410
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 1 WNFRCKPP 8
WNF PP
Sbjct: 403 WNFGVAPP 410
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WNFRCKPPVG 10
W+ PPVG
Sbjct: 1480 WDVPSPPPVG 1489
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WNFRCKPPVG 10
W+ PPVG
Sbjct: 1070 WDVPSPPPVG 1079
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WNFRCKPPVG 10
W+ PPVG
Sbjct: 1480 WDVPSPPPVG 1489
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WNFRCKPPVG 10
W+ PPVG
Sbjct: 1480 WDVPSPPPVG 1489
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 1 WNFRCKPP 8
WNF PP
Sbjct: 403 WNFGVAPP 410
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WNFRCKPPVG 10
W+ PPVG
Sbjct: 1480 WDVPSPPPVG 1489
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 NFRCKPPVG 10
N +C+ P+G
Sbjct: 291 NTKCQTPIG 299
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 1 WNFRCKPP 8
WNF PP
Sbjct: 399 WNFGLSPP 406
Query: 5 CKPPVG 10
C PP+G
Sbjct: 158 CAPPLG 163
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 4 RCKPPV 9
RC PPV
Sbjct: 369 RCHPPV 374
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 1 WNFRCKPP 8
WNF PP
Sbjct: 464 WNFGVPPP 471
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 3 FRCKPPVG 10
+ C+PP G
Sbjct: 619 YHCEPPGG 626
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 1 WNFRCKPP 8
WNF PP
Sbjct: 432 WNFGVPPP 439
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 2 NFRCKPP 8
N CKPP
Sbjct: 1183 NAECKPP 1189
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 2 NFRCKPP 8
N CKPP
Sbjct: 1183 NAECKPP 1189
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 5 CKPPVG 10
CKPP G
Sbjct: 191 CKPPTG 196
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 5 CKPPVG 10
CKPP G
Sbjct: 188 CKPPTG 193
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 1 WNFRCKPPVG 10
WN PPV
Sbjct: 435 WNIGLSPPVA 444
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 3 FRCKPPVG 10
+ C PP G
Sbjct: 120 YVCPPPTG 127
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 FRCKPPVG 10
+ C PP G
Sbjct: 120 YVCPPPTG 127
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 3 FRCKPPVG 10
+ C PP G
Sbjct: 113 YVCPPPTG 120
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 3 FRCKPPVG 10
+ C PP G
Sbjct: 114 YVCPPPTG 121
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 3 FRCKPPVG 10
+ C PP G
Sbjct: 114 YVCPPPTG 121
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 3 FRCKPPVG 10
+ C PP G
Sbjct: 114 YVCPPPTG 121
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 5 CKPPVG 10
C PP+G
Sbjct: 160 CAPPIG 165
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 1 WNFRCKPP 8
WNF PP
Sbjct: 397 WNFGLSPP 404
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 1 WNFRCKPP 8
WNF PP
Sbjct: 397 WNFGLSPP 404
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 3 FRCKPPVG 10
+ C PP G
Sbjct: 109 YVCPPPTG 116
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 3 FRCKPPVG 10
+ C PP G
Sbjct: 109 YVCPPPTG 116
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 5 CKPPVG 10
C+PP+G
Sbjct: 53 CQPPLG 58
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 1 WNFRCKPPVG 10
WN PPV
Sbjct: 399 WNIGLSPPVA 408
Query: 4 RCKPPV 9
R KPPV
Sbjct: 472 RTKPPV 477
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 3 FRCKPPVG 10
+ C PP G
Sbjct: 95 YVCPPPTG 102
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 NFRCKPPV 9
N+ CK PV
Sbjct: 247 NYGCKRPV 254
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 NFRCKPPVG 10
N +C+ P+G
Sbjct: 291 NTKCQTPMG 299
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 2 NFRCKPPVG 10
N +C+ P+G
Sbjct: 291 NTKCQTPMG 299
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 2 NFRCKPPVG 10
N +C+ P+G
Sbjct: 287 NTKCQTPMG 295
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 NFRCKPPVG 10
N +C+ P+G
Sbjct: 291 NTKCQTPMG 299
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 2 NFRCKPPVG 10
N +C+ P+G
Sbjct: 291 NTKCQTPMG 299
>sp|NCAP_SINV|NUCLEOPROTEIN Nombre orthohantavirus (SNV) (Sin
Query: 1 WNFRCKP 7
W F C P
Sbjct: 305 WVFACAP 311
>sp|NCAP_PUUMU|NUCLEOPROTEIN virus (strain Udmurtia/894CG/91)
Query: 1 WNFRCKP 7
W F C P
Sbjct: 310 WVFACAP 316
>sp|NCAP_PUUMS|NUCLEOPROTEIN virus (strain Sotkamo/V-2969/81)
Query: 1 WNFRCKP 7
W F C P
Sbjct: 310 WVFACAP 316
>sp|NCAP_PUUMP|NUCLEOPROTEIN virus (strain P360)
Query: 1 WNFRCKP 7
W F C P
Sbjct: 310 WVFACAP 316
>sp|NCAP_PUUMK|NUCLEOPROTEIN virus (strain K27)
Query: 1 WNFRCKP 7
W F C P
Sbjct: 310 WVFACAP 316
>sp|NCAP_PUUMG|NUCLEOPROTEIN virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 WNFRCKP 7
W F C P
Sbjct: 310 WVFACAP 316
>sp|NCAP_PUUME|NUCLEOPROTEIN virus (strain Evo/12CG/93)
Query: 1 WNFRCKP 7
W F C P
Sbjct: 310 WVFACAP 316
>sp|NCAP_ANDV|NUCLEOPROTEIN orthohantavirus (ANDV) (Andes virus)
Query: 1 WNFRCKP 7
W F C P
Sbjct: 305 WVFACAP 311
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 2 NFRCKPPVG 10
N +C+ P+G
Sbjct: 289 NTKCQTPMG 297
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 NFRCKPPV 9
N+ CK PV
Sbjct: 247 NYGCKRPV 254
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 NFRCKPPV 9
N+ CK PV
Sbjct: 247 NYGCKRPV 254
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 NFRCKPPVG 10
N +C+ P+G
Sbjct: 291 NTKCQTPMG 299
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 NFRCKPPVG 10
N +C+ P+G
Sbjct: 291 NTKCQTPMG 299
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 1 WNFRCKPPVG 10
WN PPV
Sbjct: 400 WNIGLSPPVA 409
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 2 NFRCKPPVG 10
N +C+ P+G
Sbjct: 291 NTKCQTPMG 299
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 NFRCKPPVG 10
N +C+ P+G
Sbjct: 280 NTKCQTPMG 288
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 NFRCKPPVG 10
+F C PP G
Sbjct: 2355 SFGCPPPSG 2363
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 2 NFRCKPPVG 10
N +C+ P+G
Sbjct: 291 NTKCQTPMG 299
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 5 CKPPVG 10
C PP+G
Sbjct: 160 CAPPIG 165
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 3 FRCKPP 8
F CKPP
Sbjct: 217 FFCKPP 222
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 NFRCKPPVG 10
N +C+ P+G
Sbjct: 291 NTKCQTPMG 299
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 NFRCKPPVG 10
N +C+ P+G
Sbjct: 280 NTKCQTPMG 288
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 2 NFRCKPPVG 10
N +C+ P+G
Sbjct: 280 NTKCQTPMG 288
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 NFRCKPPVG 10
N +C+ P+G
Sbjct: 291 NTKCQTPMG 299
>sp|NCAP_BCCV|NUCLEOPROTEIN Creek Canal orthohantavirus (BCCV)
Query: 1 WNFRCKP 7
W F C P
Sbjct: 305 WIFACAP 311
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 NFRCKPPVG 10
N +C+ P+G
Sbjct: 283 NTKCQTPMG 291
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 WNFRCKPPVG 10
+NF KP +G
Sbjct: 816 FNFTSKPTLG 825
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 NFRCKPPVG 10
N +C+ P+G
Sbjct: 280 NTKCQTPMG 288
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 WNFRCKPPV 9
W+F PP+
Sbjct: 1024 WDFVSTPPL 1032
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 WNFRCKPPV 9
W+F PP+
Sbjct: 1023 WDFVSTPPL 1031
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 1 WNFRCKPPVG 10
+NF KP +G
Sbjct: 493 FNFASKPTLG 502
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 WNFRCKPPV 9
W+F PP+
Sbjct: 1023 WDFVSTPPL 1031
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 WNFRCKPPV 9
W+F PP+
Sbjct: 1025 WDFVSTPPL 1033
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 WNFRCKPPV 9
W+F PP+
Sbjct: 1025 WDFVSTPPL 1033
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 WNFRCKPPV 9
W+F PP+
Sbjct: 1022 WDFVSTPPL 1030
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 WNFRCKPPV 9
W+F PP+
Sbjct: 1023 WDFVSTPPL 1031
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 WNFRCKPPV 9
W+F PP+
Sbjct: 1024 WDFVSTPPL 1032
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 WNFRCKPPV 9
W+F PP+
Sbjct: 1023 WDFVSTPPL 1031
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 NFRCKPP 8
N +CK P
Sbjct: 1410 NIKCKEP 1416
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 2 NFRCKPP 8
N +CK P
Sbjct: 1407 NIKCKEP 1413
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 WNFRCKPPV 9
W+F PP+
Sbjct: 1022 WDFVSTPPL 1030
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 5 CKPPVG 10
C PP+G
Sbjct: 161 CTPPMG 166
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 4 RCKPPVG 10
+C+ PVG
Sbjct: 293 KCQTPVG 299
>sp|NCAP_PUUMB|NUCLEOPROTEIN virus (strain Berkel)
Query: 1 WNFRCKP 7
W F C P
Sbjct: 267 WVFACAP 273
>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto
Query: 2 NFRCKPPVG 10
N +C+ P+G
Sbjct: 292 NTKCQTPLG 300
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 3 FRCKPP 8
+ C+PP
Sbjct: 620 YHCEPP 625
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 2 NFRCKPPV 9
N CKPP
Sbjct: 1174 NAECKPPA 1181
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 5 CKPPVG 10
C PP+G
Sbjct: 161 CTPPMG 166
>sp|REV_HV2UC|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 3 FRCKPPV 9
F C PPV
Sbjct: 95 FTCIPPV 101
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 5 CKPPVG 10
C PP+G
Sbjct: 189 CTPPMG 194
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 WNFRCKPPV 9
W+F PP+
Sbjct: 1024 WDFVSTPPL 1032
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 5 CKPPVG 10
C PP+G
Sbjct: 159 CTPPLG 164
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 5 CKPPVG 10
C PP+G
Sbjct: 160 CTPPLG 165
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 WNFRCKPPVG 10
W+ PP+G
Sbjct: 1480 WDVPSPPPMG 1489
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WNFRCKPPVG 10
W+ PP+G
Sbjct: 1480 WDVPSPPPMG 1489
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WNFRCKPPVG 10
W+ PP+G
Sbjct: 1480 WDVPSPPPMG 1489
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 NFRCKPP 8
NF +PP
Sbjct: 1008 NFTARPP 1014
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 WNFRCK 6
W+ RC+
Sbjct: 1313 WHLRCQ 1318
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 2 NFRCKPP 8
NF +PP
Sbjct: 1008 NFTARPP 1014
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 2 NFRCKPP 8
NF +PP
Sbjct: 1008 NFTARPP 1014
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 WNFRCKPPV 9
W+F PP+
Sbjct: 1024 WDFISTPPL 1032
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 4 RCKPPVG 10
RC PVG
Sbjct: 195 RCGKPVG 201
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 NFRCKP 7
N+RC P
Sbjct: 1190 NWRCNP 1195
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 WNFRCKP 7
W + C P
Sbjct: 217 WGYGCSP 223
>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 4 RCKPP 8
RC PP
Sbjct: 369 RCHPP 373
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 WNFRCKP 7
W + C P
Sbjct: 217 WGYGCSP 223
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 5 CKPPVG 10
C PP+G
Sbjct: 189 CTPPMG 194
>sp|UNG_HHV7J|URACIL-DNA glycosylase|Human herpesvirus 7 (strain JI)
Query: 1 WNFRCKP 7
W++ C P
Sbjct: 74 WSYLCSP 80
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 WNFRCKPPV 9
W F PP+
Sbjct: 1000 WEFVSTPPL 1008
>sp|HEMA_HUTV|HEMAGGLUTININ-ESTERASE torovirus (HuTV)
Query: 5 CKPP 8
CKPP
Sbjct: 304 CKPP 307
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 WNFRCKPPV 9
W F PP+
Sbjct: 1002 WEFVSTPPL 1010
>sp|VE6_HPV51|PROTEIN E6|Human papillomavirus 51
Query: 4 RCKPPVG 10
RC+ P+G
Sbjct: 105 RCQRPLG 111
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 5 CKPP 8
CKPP
Sbjct: 1182 CKPP 1185
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 5 CKPP 8
CKPP
Sbjct: 1182 CKPP 1185
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 5 CKPP 8
CKPP
Sbjct: 1182 CKPP 1185
>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2
Query: 1 WNFRCKPPV 9
W C P V
Sbjct: 422 WTLLCTPDV 430
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 WNFRCKPPV 9
WN PPV
Sbjct: 172 WNMCPLPPV 180
>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12
Query: 3 FRCKPP 8
F C PP
Sbjct: 56 FGCSPP 61
78|Sequence|386|395|KPPVGLNPRT
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 KPPVGLNPRT 10
KPPV +NP T
Sbjct: 78 KPPVDINPDT 87
>sp|E1BS_ADE41|E1B protein, small T-antigen|Human adenovirus F serotype 41
Query: 1 KPPVGLNP 8
+PP GL+P
Sbjct: 139 QPPHGLDP 146
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 2 PPVGLNPR 9
PP+ NP+
Sbjct: 1936 PPMSTNPK 1943
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 2 PPVGLNPR 9
PP+ NP+
Sbjct: 1936 PPMSTNPK 1943
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 3 PVGLNPRT 10
P+G +PRT
Sbjct: 132 PIGSHPRT 139
>sp|E1BS_ADE05|E1B protein, small T-antigen|Human adenovirus C serotype 5
Query: 2 PPVGLNPR 9
P GL+PR
Sbjct: 168 PRAGLDPR 175
>sp|E1BS_ADE02|E1B protein, small T-antigen|Human adenovirus C serotype 2
Query: 2 PPVGLNPR 9
P GL+PR
Sbjct: 167 PRAGLDPR 174
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 KPPVGLNPRT 10
+PPV +P T
Sbjct: 1835 EPPVTYSPAT 1844
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 KPPVGLNPRT 10
+PPV +P T
Sbjct: 1835 EPPVTYSPAT 1844
>sp|VP2_POVWU|MINOR capsid protein VP2|WU polyomavirus (WUPyV)
Query: 2 PPVGLNPR 9
PP G NP+
Sbjct: 117 PPAGYNPQ 124
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 3 PVGLNPRT 10
P+G +PRT
Sbjct: 193 PIGSHPRT 200
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 3 PVGLNPRT 10
P+G +PRT
Sbjct: 263 PIGSHPRT 270
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 5 GLNPR 9
GLNPR
Sbjct: 90 GLNPR 94
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 5 GLNPR 9
GLNPR
Sbjct: 90 GLNPR 94
>sp|DR6_HHV6Z|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6B (strain Z29)
Query: 1 KPPVGLNPR 9
+PPVG PR
Sbjct: 378 RPPVGKLPR 386
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 3 PVGLNPRT 10
P+G +PRT
Sbjct: 268 PIGSHPRT 275
>sp|PHOSP_VSNJM|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 2 PPVGL 6
PPVGL
Sbjct: 121 PPVGL 125
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 3 PVGLNPRT 10
P+G +PRT
Sbjct: 268 PIGSHPRT 275
>sp|PHOSP_VSNJO|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 2 PPVGL 6
PPVGL
Sbjct: 121 PPVGL 125
>sp|SHDAG_HDVNA|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 2 PPVGLNP 8
PP G+NP
Sbjct: 148 PPGGVNP 154
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 KPPVGLNP 8
K PV LNP
Sbjct: 55 KTPVWLNP 62
79|Sequence|391|400|LNPRTGPEGL
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 3 PRTGPEGL 10
PRTGPE L
Sbjct: 1389 PRTGPEIL 1396
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 3 PRTGPEGL 10
PRTGPE L
Sbjct: 1389 PRTGPEIL 1396
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 NPRTGPEGL 10
NPR G EG
Sbjct: 734 NPRGGIEGF 742
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 LNPRTGPEGL 10
++PR G EGL
Sbjct: 739 VSPRGGIEGL 748
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 LNPRTGPEGL 10
++PR G EGL
Sbjct: 739 VSPRGGIEGL 748
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 LNPRTGPEGL 10
++PR G EGL
Sbjct: 733 VSPRGGIEGL 742
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 LNPRTGPEGL 10
++PR G EGL
Sbjct: 733 VSPRGGIEGL 742
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 LNPRTGPEGL 10
++PR G EGL
Sbjct: 739 VSPRGGIEGL 748
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 3 PRTGPEGL 10
PR GPE L
Sbjct: 271 PRLGPEVL 278
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 NPRTGP 7
NP TGP
Sbjct: 325 NPGTGP 330
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain
Query: 2 NPRTG 6
NPRTG
Sbjct: 21 NPRTG 25
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 2 NPRTG 6
NPRTG
Sbjct: 21 NPRTG 25
>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)
Query: 2 NPRTGPEGL 10
NPRT P L
Sbjct: 215 NPRTAPRSL 223
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 NPRTGP 7
NP TGP
Sbjct: 325 NPGTGP 330
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 NPRTGP 7
NP TGP
Sbjct: 325 NPGTGP 330
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 NPRTGP 7
NP TGP
Sbjct: 325 NPGTGP 330
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 NPRTGP 7
NP TGP
Sbjct: 325 NPGTGP 330
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 2 NPRTGP 7
NP TGP
Sbjct: 325 NPGTGP 330
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 NPRTGP 7
NP TGP
Sbjct: 325 NPGTGP 330
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 4 RTGPEG 9
RTGP G
Sbjct: 335 RTGPAG 340
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 PRTGPEG 9
PR GP G
Sbjct: 3070 PRPGPGG 3076
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 4 RTGPEGL 10
R GPEG
Sbjct: 117 RVGPEGF 123
>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain
Query: 1 LNPRTG 6
+NPR+G
Sbjct: 116 INPRSG 121
>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain
Query: 1 LNPRTG 6
+NPR+G
Sbjct: 116 INPRSG 121
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 4 RTGPEGL 10
R GPEG
Sbjct: 117 RVGPEGF 123
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 3 PRTGPEG 9
PRT P+G
Sbjct: 1513 PRTYPKG 1519
>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)
Query: 3 PRTGP 7
PRTGP
Sbjct: 473 PRTGP 477
>sp|A28_MCV1|ENVELOPE protein A28 homolog|Molluscum contagiosum virus subtype 1
Query: 1 LNPRTGPEG 9
+NP T P G
Sbjct: 120 VNPCTDPNG 128
>sp|PHOSP_PI1HC|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 2 NPRTGPEGL 10
N +T P+GL
Sbjct: 264 NTKTSPKGL 272
>sp|NS1_INB|NON-STRUCTURAL protein 1|Influenza B virus (strain B/ID/1986)
Query: 1 LNPRTGPEGL 10
+NP G EG
Sbjct: 91 MNPSAGVEGF 100
>sp|NS1_INBGA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GA/1986)
Query: 1 LNPRTGPEGL 10
+NP G EG
Sbjct: 91 MNPSAGVEGF 100
>sp|NS1_INBYA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Yamagata/1/1973)
Query: 1 LNPRTGPEGL 10
+NP G EG
Sbjct: 91 MNPSAGIEGF 100
>sp|NS1_INBMD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Maryland/1959)
Query: 1 LNPRTGPEGL 10
+NP G EG
Sbjct: 91 MNPSAGIEGF 100
>sp|NS1_INBVJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Victoria/1987)
Query: 1 LNPRTGPEGL 10
+NP G EG
Sbjct: 91 MNPSAGIEGF 100
>sp|NS1_INBSJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/1964)
Query: 1 LNPRTGPEGL 10
+NP G EG
Sbjct: 91 MNPSAGIEGF 100
>sp|PHOSP_VSIVA|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 5 TGPEGL 10
T PEGL
Sbjct: 125 TSPEGL 130
>sp|NS1_INBSI|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/222/1979)
Query: 1 LNPRTGPEGL 10
+NP G EG
Sbjct: 91 MNPSAGIEGF 100
>sp|NS1_INBRU|NON-STRUCTURAL protein 1|Influenza B virus (strain B/RU/1969)
Query: 1 LNPRTGPEGL 10
+NP G EG
Sbjct: 91 MNPSAGIEGF 100
>sp|NS1_INBPA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/PA/1979)
Query: 1 LNPRTGPEGL 10
+NP G EG
Sbjct: 91 MNPSAGIEGF 100
>sp|NS1_INBAD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Ann
Query: 1 LNPRTGPEGL 10
+NP G EG
Sbjct: 91 MNPSAGIEGF 100
>sp|NS1_INBAC|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Ann
Query: 1 LNPRTGPEGL 10
+NP G EG
Sbjct: 91 MNPSAGIEGF 100
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 NPRTG 6
NPRTG
Sbjct: 3011 NPRTG 3015
>sp|NS1_INBHK|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Hong
Query: 1 LNPRTGPEGL 10
+NP G EG
Sbjct: 91 MNPSAGIEGF 100
>sp|NS1_INBBA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/BA/1978)
Query: 1 LNPRTGPEGL 10
+NP G EG
Sbjct: 91 MNPSAGIEGF 100
>sp|NS1_INBHT|NON-STRUCTURAL protein 1|Influenza B virus (strain B/HT/1984)
Query: 1 LNPRTGPEGL 10
+NP G EG
Sbjct: 91 MNPSAGIEGF 100
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 1 LNPRTGPE 8
L+P+TG E
Sbjct: 666 LDPQTGEE 673
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 PRTGPEG 9
P T PEG
Sbjct: 2361 PSTKPEG 2367
80|Sequence|396|405|GPEGLPYSSP
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 3 EGLPYSSP 10
EG+P+ SP
Sbjct: 792 EGVPFDSP 799
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 PEGLPYSS 9
PEGL YS+
Sbjct: 2203 PEGLIYSN 2210
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 PEGLPYSS 9
PEGL YS+
Sbjct: 2203 PEGLIYSN 2210
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 4 GLPYSSP 10
G PY SP
Sbjct: 88 GSPYESP 94
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 4 GLPYSSP 10
G PY SP
Sbjct: 88 GSPYESP 94
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 GPEGLPYSS 9
P LPY+S
Sbjct: 824 APRALPYTS 832
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 2 PEGLPYS 8
PE +PY+
Sbjct: 320 PEDIPYN 326
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 PEGLPYS 8
P GLP++
Sbjct: 2357 PRGLPFT 2363
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 GPEGLPYSSP 10
G GLP S+P
Sbjct: 445 GLYGLPASNP 454
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 3 EGLPYS 8
+GLPYS
Sbjct: 477 QGLPYS 482
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 3 EGLPYS 8
+GLPYS
Sbjct: 477 QGLPYS 482
>sp|VE6_HPVME|PROTEIN E6|Human papillomavirus type ME180
Query: 2 PEGLPYSSP 10
PE PY P
Sbjct: 7 PEERPYKLP 15
>sp|VE6_HPV68|PROTEIN E6|Human papillomavirus 68
Query: 2 PEGLPYSSP 10
PE PY P
Sbjct: 7 PEERPYKLP 15
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GPEGLP 6
GP+G P
Sbjct: 192 GPDGYP 197
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GPEGLP 6
GP+G P
Sbjct: 192 GPDGYP 197
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GPEGLP 6
GP+G P
Sbjct: 192 GPDGYP 197
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GPEGLP 6
GP+G P
Sbjct: 192 GPDGYP 197
>sp|VE6_HPV34|PROTEIN E6|Human papillomavirus type 34
Query: 2 PEGLPYSSP 10
PE PY P
Sbjct: 6 PEERPYKLP 14
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 PEGLPYSS 9
P G+P++S
Sbjct: 1505 PSGMPFTS 1512
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 PEGLPYSS 9
P G+P++S
Sbjct: 1505 PSGMPFTS 1512
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 PEGLPYSS 9
P G+P++S
Sbjct: 1506 PSGMPFTS 1513
>sp|NCAP_SFTSV|NUCLEOPROTEIN phlebovirus (isolate SFTSV/Human/China/HB29/2010) (Severe
Query: 1 GPEGLP 6
GP+G+P
Sbjct: 226 GPDGVP 231
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 PEGLPYS 8
P+G+P++
Sbjct: 2357 PKGIPFT 2363
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 5 LPYSSP 10
+PY+SP
Sbjct: 830 IPYTSP 835
>sp|UNG_VAR67|URACIL-DNA glycosylase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 GLPYSSP 10
G+P+ SP
Sbjct: 76 GVPFESP 82
>sp|UNG_VARV|URACIL-DNA glycosylase|Variola virus
Query: 4 GLPYSSP 10
G+P+ SP
Sbjct: 76 GVPFESP 82
>sp|UNG_VACCC|URACIL-DNA glycosylase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 GLPYSSP 10
G+P+ SP
Sbjct: 76 GVPFESP 82
>sp|UNG_VACCA|URACIL-DNA glycosylase|Vaccinia virus (strain Ankara) (VACV)
Query: 4 GLPYSSP 10
G+P+ SP
Sbjct: 76 GVPFESP 82
>sp|UNG_MONPV|URACIL-DNA glycosylase|Monkeypox virus (MPXV)
Query: 4 GLPYSSP 10
G+P+ SP
Sbjct: 76 GVPFESP 82
>sp|GI_HHV2H|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain HG52)
Query: 2 PEGLPYSSP 10
P LP+S+P
Sbjct: 184 PAQLPFSAP 192
81|Sequence|401|410|PYSSPDNGEA
>sp|ORF45_HHV8P|PROTEIN ORF45|Human herpesvirus 8 type P
Query: 1 PYSSPDNG 8
PYS PD G
Sbjct: 217 PYSDPDEG 224
>sp|VE2_HPV16|REGULATORY protein E2|Human papillomavirus type 16
Query: 1 PYSSPDNG 8
P S PD G
Sbjct: 241 PRSEPDTG 248
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PYSSPDNG 8
PY +PD G
Sbjct: 320 PYPNPDMG 327
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PYSSPDNG 8
PY +PD G
Sbjct: 320 PYPNPDMG 327
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PYSSPDNG 8
PY +PD G
Sbjct: 320 PYPNPDMG 327
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 YSSPDNGE 9
YS+PD+ E
Sbjct: 2006 YSNPDSTE 2013
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 SSPDNGEA 10
+ P NGEA
Sbjct: 345 ACPSNGEA 352
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 2 YSSPDNGEA 10
Y SP+N E+
Sbjct: 559 YKSPNNSES 567
>sp|VE8E2_HPV16|PROTEIN E8^E2C|Human papillomavirus type 16
Query: 1 PYSSPDNG 8
P S PD G
Sbjct: 53 PRSEPDTG 60
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 YSSPDNGE 9
YS P+N E
Sbjct: 1983 YSDPNNHE 1990
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 YSSPDNGE 9
YS P+N E
Sbjct: 1983 YSDPNNHE 1990
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 YSSPDNGE 9
YS P+N E
Sbjct: 1983 YSDPNNHE 1990
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 PDNGE 9
PDNG+
Sbjct: 61 PDNGD 65
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 PDNGE 9
PDNG+
Sbjct: 59 PDNGD 63
>sp|ETF1_VARV|EARLY transcription factor 70 kDa|Variola virus
Query: 2 YSSPDNGEA 10
Y+SP+N +
Sbjct: 404 YNSPENDDG 412
>sp|ETF1_VAR67|EARLY transcription factor 70 kDa|Variola virus (isolate
Query: 2 YSSPDNGEA 10
Y+SP+N +
Sbjct: 404 YNSPENDDG 412
>sp|ETF1_MONPV|EARLY transcription factor 70 kDa|Monkeypox virus (MPXV)
Query: 2 YSSPDNGEA 10
Y+SP+N +
Sbjct: 404 YNSPENDDG 412
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 PDNGEA 10
PD GEA
Sbjct: 1196 PDRGEA 1201
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 PDNGEA 10
PD GEA
Sbjct: 1197 PDRGEA 1202
>sp|ETF1_VACCT|EARLY transcription factor 70 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 YSSPDNGEA 10
Y+SP+N +
Sbjct: 404 YNSPENDDG 412
>sp|ETF1_VACCA|EARLY transcription factor 70 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 YSSPDNGEA 10
Y+SP+N +
Sbjct: 404 YNSPENDDG 412
>sp|ETF1_VACCC|EARLY transcription factor 70 kDa|Vaccinia virus (strain Copenhagen)
Query: 2 YSSPDNGEA 10
Y+SP+N +
Sbjct: 404 YNSPENDDG 412
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 PDNGEA 10
PD GEA
Sbjct: 1196 PDRGEA 1201
>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 SSPDNG 8
S PDNG
Sbjct: 196 SGPDNG 201
>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New
Query: 3 SSPDNG 8
S PDNG
Sbjct: 196 SGPDNG 201
>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New
Query: 3 SSPDNG 8
S PDNG
Sbjct: 196 SGPDNG 201
82|Sequence|406|415|DNGEAILDPS
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 NGEAILDP 9
NGE LDP
Sbjct: 1559 NGEGRLDP 1566
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 NGEAILDPS 10
NGE L+P+
Sbjct: 1557 NGEGRLNPT 1565
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 NGEAILDPS 10
NGE L+P+
Sbjct: 1557 NGEGRLNPT 1565
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 DNGEAILDP 9
D EA+ DP
Sbjct: 2930 DAAEAVQDP 2938
Query: 3 GEAILDPS 10
GE +L+P+
Sbjct: 1553 GEGLLEPA 1560
>sp|ORF45_HHV8P|PROTEIN ORF45|Human herpesvirus 8 type P
Query: 1 DNGEAILDP 9
D G AIL+P
Sbjct: 182 DEGVAILEP 190
>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)
Query: 1 DNGEAILDP 9
D+GE LDP
Sbjct: 34 DSGELALDP 42
83|Sequence|411|420|ILDPSQAPRP
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 ILDPSQAPRP 10
I DP+Q P P
Sbjct: 5723 IGDPAQLPAP 5732
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 ILDPSQAPRP 10
I DP+Q P P
Sbjct: 5700 IGDPAQLPAP 5709
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 ILDPSQAPRP 10
I DP+Q P P
Sbjct: 5695 IGDPAQLPAP 5704
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 ILDPSQAPRP 10
I DP+Q P P
Sbjct: 5733 IGDPAQLPAP 5742
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 ILDPSQAPRP 10
I DP+Q P P
Sbjct: 5753 IGDPAQLPAP 5762
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 ILDPSQAPRP 10
I DP+Q P P
Sbjct: 5783 IGDPAQLPAP 5792
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 DPSQAPRP 10
DP+Q P P
Sbjct: 5711 DPAQLPAP 5718
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 DPSQAPRP 10
DP Q P P
Sbjct: 5372 DPQQLPAP 5379
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 DPSQAPRP 10
DP Q P P
Sbjct: 5397 DPQQLPAP 5404
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ILDPSQAPRP 10
IL+P +AP P
Sbjct: 758 ILEPFRAPNP 767
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LDPSQAPR 9
LDP + PR
Sbjct: 1575 LDPGKNPR 1582
>sp|US10_CHV1|VIRION protein US10 homolog|Cercopithecine herpesvirus 1 (CeHV-1)
Query: 2 LDPSQAPRP 10
L P Q PRP
Sbjct: 22 LSPGQHPRP 30
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 ILDPSQAPRP 10
++DP+ P P
Sbjct: 65 MVDPTNGPLP 74
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 ILDPSQAPRP 10
++DP+ P P
Sbjct: 65 MVDPTNGPLP 74
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 ILDPSQAPRP 10
++DP+ P P
Sbjct: 65 MVDPTNGPLP 74
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 ILDPSQAPRP 10
++DP+ P P
Sbjct: 65 MVDPTNGPLP 74
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 2 LDPSQAPRP 10
PS+AP P
Sbjct: 494 FQPSEAPAP 502
>sp|VU4_HHV6Z|PROTEIN U4|Human herpesvirus 6B (strain Z29)
Query: 1 ILDPSQAPR 9
I DP + PR
Sbjct: 376 IKDPMRVPR 384
>sp|VU4_HHV6U|PROTEIN U4|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 ILDPSQAPR 9
I DP + PR
Sbjct: 376 IKDPMRVPR 384
>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P
Query: 2 LDPSQAPRP 10
+DP Q P P
Sbjct: 1 MDPGQRPNP 9
>sp|ORF3_HEVHY|PROTEIN ORF3|Hepatitis E virus genotype 1
Query: 1 ILDPSQAP 8
IL PSQ+P
Sbjct: 52 ILSPSQSP 59
>sp|ORF3_HEVPA|PROTEIN ORF3|Hepatitis E virus genotype 1
Query: 1 ILDPSQAP 8
IL PSQ+P
Sbjct: 52 ILSPSQSP 59
>sp|ORF3_HEVCH|PROTEIN ORF3|Hepatitis E virus genotype 1
Query: 1 ILDPSQAP 8
IL PSQ+P
Sbjct: 52 ILSPSQSP 59
>sp|ORF3_HEVBU|PROTEIN ORF3|Hepatitis E virus genotype 1
Query: 1 ILDPSQAP 8
IL PSQ+P
Sbjct: 52 ILSPSQSP 59
>sp|ORF3_HEVMY|PROTEIN ORF3|Hepatitis E virus genotype 1
Query: 1 ILDPSQAP 8
IL PSQ+P
Sbjct: 52 ILSPSQSP 59
>sp|ORF3_HEVME|PROTEIN ORF3|Hepatitis E virus genotype 2
Query: 1 ILDPSQAP 8
IL PSQ+P
Sbjct: 52 ILSPSQSP 59
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 4 PSQAPRP 10
PSQAP P
Sbjct: 513 PSQAPDP 519
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 3 DPSQAPRP 10
DPS P P
Sbjct: 208 DPSYQPEP 215
>sp|UL128_HCMVM|ENVELOPE protein UL128|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ILDPSQAPR 9
+LD S+ PR
Sbjct: 16 LLDHSRVPR 24
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 3 DPSQAPRP 10
DP+ PRP
Sbjct: 281 DPTDRPRP 288
84|Sequence|416|425|QAPRPFNEPC
>sp|Y172_ADE02|UNCHARACTERIZED protein D-172|Human adenovirus C serotype 2
Query: 2 APRPFNEPC 10
+P PFN PC
Sbjct: 18 SPAPFNTPC 26
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 4 RPFNEP 9
RPFN+P
Sbjct: 739 RPFNKP 744
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 3 PRPFNEPC 10
PRP PC
Sbjct: 265 PRPLRLPC 272
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 PRPFNEPC 10
PRP PC
Sbjct: 265 PRPLRLPC 272
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 PRPFNEPC 10
PRP PC
Sbjct: 265 PRPLRLPC 272
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 1 QAPRPFNEPC 10
Q PRP PC
Sbjct: 444 QVPRPGVMPC 453
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 1 QAPRPFNEPC 10
Q PRP PC
Sbjct: 444 QVPRPGVMPC 453
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 4 RPFNEP 9
R FNEP
Sbjct: 1358 RSFNEP 1363
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 QAPRPFN 7
Q P+PF+
Sbjct: 840 QVPQPFD 846
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 QAPRPFN 7
Q P+PF+
Sbjct: 838 QVPQPFD 844
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 QAPRPFN 7
Q P+PF+
Sbjct: 838 QVPQPFD 844
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 QAPRPFN 7
Q P+PF+
Sbjct: 844 QVPQPFD 850
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 QAPRPFN 7
Q P+PF+
Sbjct: 838 QVPQPFD 844
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 QAPRPFN 7
Q P+PF+
Sbjct: 838 QVPQPFD 844
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 APRPFN 7
AP PFN
Sbjct: 51 APPPFN 56
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 2 APRPFN 7
AP PFN
Sbjct: 51 APPPFN 56
>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I67A2|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 150 EAPSPYN 156
>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 3 PRPFN 7
P+PFN
Sbjct: 509 PQPFN 513
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 3 PRPFN 7
P+PFN
Sbjct: 509 PQPFN 513
>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 150 EAPSPYN 156
>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 3 PRPFN 7
P+PFN
Sbjct: 509 PQPFN 513
>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 145 EAPSPYN 151
>sp|NRAM_I33A0|NEURAMINIDASE A virus (strain A/Wilson-Smith/1933
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 149 EAPSPYN 155
>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 145 EAPSPYN 151
>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 145 EAPSPYN 151
>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 145 EAPSPYN 151
>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 145 EAPSPYN 151
>sp|NRAM_I02A1|NEURAMINIDASE A virus (strain A/Guinea
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 145 EAPSPYN 151
>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 145 EAPSPYN 151
>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 145 EAPSPYN 151
>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 165 EAPSPYN 171
>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 145 EAPSPYN 151
>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 137 EAPSPYN 143
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 1 QAPRPFN 7
+AP P+N
Sbjct: 146 EAPSPYN 152
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 1 QAPRPFNE 8
+AP PF E
Sbjct: 189 RAPVPFEE 196
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 1 QAPRPFNE 8
+AP PF E
Sbjct: 189 RAPVPFEE 196
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 1 QAPRPFNE 8
+AP PF E
Sbjct: 188 RAPVPFEE 195
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 1 QAPRPFNE 8
+AP PF E
Sbjct: 189 RAPVPFEE 196
>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 QAPRPFN 7
Q+P+P N
Sbjct: 248 QSPKPIN 254
>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)
Query: 1 QAPRPFN 7
Q+P+P N
Sbjct: 248 QSPKPIN 254
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 1 QAPRPFNEP 9
Q P P N P
Sbjct: 255 QCPLPGNHP 263
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 APRPFNE 8
AP PF+E
Sbjct: 566 APGPFHE 572
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 APRPFNE 8
AP PF+E
Sbjct: 566 APGPFHE 572
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 QAPRPFNEPC 10
+AP N PC
Sbjct: 134 EAPISDNSPC 143
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 4 RPFNEP 9
+PF EP
Sbjct: 1257 KPFTEP 1262
>sp|MATRX_VSNJO|MATRIX protein|Vesicular stomatitis New Jersey virus
Query: 3 PRPFNEPC 10
P P++E C
Sbjct: 24 PPPYDESC 31
85|Sequence|421|430|FNEPCKYPGR
>sp|E321_ADE35|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 35
Query: 1 FNEPCKYPGR 10
F +PC PGR
Sbjct: 52 FTKPCDQPGR 61
>sp|E321_ADE1P|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 11
Query: 1 FNEPCKYPGR 10
F +PC PGR
Sbjct: 52 FTKPCDQPGR 61
>sp|E321_ADE1A|EARLY E3 20.2 kDa glycoprotein|Human adenovirus B serotype 11
Query: 1 FNEPCKYPGR 10
F +PC PGR
Sbjct: 52 FTKPCDQPGR 61
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 2 NEPCKYP 8
NE CKYP
Sbjct: 227 NETCKYP 233
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 2 NEPCKYP 8
NE CKYP
Sbjct: 226 NETCKYP 232
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 2 NEPCKYP 8
NE CKYP
Sbjct: 235 NETCKYP 241
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 2 NEPCKYP 8
NE CKYP
Sbjct: 226 NETCKYP 232
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 2 NEPCKYP 8
NE CKYP
Sbjct: 226 NETCKYP 232
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 2 NEPCKYP 8
NE CKYP
Sbjct: 255 NETCKYP 261
>sp|UL132_HCMVT|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 FNEPCKYPGR 10
++ CK+PGR
Sbjct: 106 YSSCCKHPGR 115
>sp|UL132_HCMVA|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FNEPCKYPGR 10
++ CK+PGR
Sbjct: 106 YSSCCKHPGR 115
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 2 NEPCKYP 8
NE CKYP
Sbjct: 226 NETCKYP 232
>sp|UL132_HCMVM|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FNEPCKYPGR 10
++ CK+PGR
Sbjct: 106 YSSCCKHPGR 115
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 2 NEPCKYP 8
NE CKYP
Sbjct: 226 NETCKYP 232
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 2 NEPCKYP 8
NE CKYP
Sbjct: 227 NETCKYP 233
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 2 NEPCKYP 8
NE CKYP
Sbjct: 224 NETCKYP 230
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 2 NEPCKYP 8
NE CKYP
Sbjct: 226 NEVCKYP 232
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 2 NEPCKYP 8
NE CKYP
Sbjct: 226 NEICKYP 232
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 2 NEPCKYP 8
NE CKYP
Sbjct: 228 NETCKYP 234
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 2 NEPCKYP 8
NE CKYP
Sbjct: 226 NETCKYP 232
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 2 NEPCKYP 8
NE CKYP
Sbjct: 227 NEICKYP 233
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 2 NEPCKYP 8
NE CKYP
Sbjct: 225 NEICKYP 231
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 2 NEPCKYP 8
NE CKYP
Sbjct: 228 NETCKYP 234
>sp|E321_ADE07|EARLY E3 20.5 kDa glycoprotein|Human adenovirus B serotype 7
Query: 1 FNEPCKYPG 9
F PC PG
Sbjct: 51 FARPCDQPG 59
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 2 NEPCKYP 8
NE CKYP
Sbjct: 228 NEICKYP 234
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 2 NEPCKYP 8
NE CKYP
Sbjct: 228 NEICKYP 234
>sp|E321_ADE03|EARLY E3 20.5 kDa glycoprotein|Human adenovirus B serotype 3
Query: 1 FNEPCKYPG 9
F PC PG
Sbjct: 51 FARPCDQPG 59
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 2 NEPCKYP 8
+E CKYP
Sbjct: 227 DETCKYP 233
>sp|Y172_ADE02|UNCHARACTERIZED protein D-172|Human adenovirus C serotype 2
Query: 1 FNEPCK 6
FN PCK
Sbjct: 22 FNTPCK 27
>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49
Query: 2 NEPCKYP 8
N+ CKYP
Sbjct: 227 NDICKYP 233
>sp|M21_HMPVC|PROTEIN M2-1|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 4 PCKYPGR 10
PCKY R
Sbjct: 6 PCKYEVR 12
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 4 PCKYPGR 10
PCK P +
Sbjct: 628 PCKVPAQ 634
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 4 PCKYPGR 10
PCK P +
Sbjct: 628 PCKVPAQ 634
>sp|YVDG_VACCC|UNCHARACTERIZED 10.4 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 CKYPGR 10
CK PGR
Sbjct: 28 CKDPGR 33
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 2 NEPCKYPG 9
+ PC++P
Sbjct: 1344 SRPCEFPA 1351
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 2 NEPCKYPG 9
+ PC++P
Sbjct: 1344 SRPCEFPA 1351
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 2 NEPCKYPG 9
+ PC++P
Sbjct: 1344 SRPCEFPA 1351
>sp|VE2_HPV20|REGULATORY protein E2|Human papillomavirus 20
Query: 1 FNEPCKYP 8
F+E KYP
Sbjct: 477 FDETVKYP 484
>sp|UL01_HCMVA|GLYCOPROTEIN UL1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 NEPCKY 7
N PC Y
Sbjct: 67 NNPCNY 72
>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8
Query: 1 FNEPCKYP 8
F+E KYP
Sbjct: 478 FDETVKYP 485
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 4 PCKYPG 9
PC+ PG
Sbjct: 2118 PCQVPG 2123
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 2 NEPCKYP 8
N CKYP
Sbjct: 252 NSTCKYP 258
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 FNEPCKYPG 9
+ PC Y G
Sbjct: 1925 YQTPCYYSG 1933
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 FNEPCKYPG 9
+ PC Y G
Sbjct: 1917 YQTPCYYSG 1925
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 FNEPCKYPG 9
+ PC Y G
Sbjct: 1916 YQTPCYYSG 1924
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 1 FNEPCKYPG 9
+ + C YPG
Sbjct: 177 YKQHCGYPG 185
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 NEPCKYP 8
+ PCK P
Sbjct: 608 DAPCKIP 614
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 NEPCKYP 8
+ PCK P
Sbjct: 608 DAPCKIP 614
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 NEPCKYP 8
+ PCK P
Sbjct: 608 DAPCKIP 614
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 NEPCKYP 8
+ PCK P
Sbjct: 608 DAPCKIP 614
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 NEPCKYP 8
+ PCK P
Sbjct: 608 DAPCKIP 614
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 NEPCKYP 8
+ PCK P
Sbjct: 610 DAPCKIP 616
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 NEPCKYP 8
+ PCK P
Sbjct: 610 DAPCKIP 616
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 NEPCKYP 8
+ PCK P
Sbjct: 610 DAPCKIP 616
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 NEPCKYP 8
+ PCK P
Sbjct: 610 DAPCKIP 616
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 NEPCKYP 8
+ PCK P
Sbjct: 610 DAPCKIP 616
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 NEPCKYP 8
+ PCK P
Sbjct: 627 DAPCKIP 633
>sp|VE2_HPV12|REGULATORY protein E2|Human papillomavirus 12
Query: 1 FNEPCKYP 8
F+E KYP
Sbjct: 474 FDETVKYP 481
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 4 PCKYP 8
PCK P
Sbjct: 625 PCKVP 629
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 4 PCKYP 8
PCK P
Sbjct: 621 PCKVP 625
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 PCKYP 8
PCK P
Sbjct: 611 PCKVP 615
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 PCKYP 8
PCK P
Sbjct: 611 PCKVP 615
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 PCKYP 8
PCK P
Sbjct: 611 PCKVP 615
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 PCKYP 8
PCK P
Sbjct: 611 PCKVP 615
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 PCKYP 8
PCK P
Sbjct: 611 PCKVP 615
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 4 PCKYP 8
PCK P
Sbjct: 624 PCKIP 628
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 4 PCKYP 8
PCK P
Sbjct: 614 PCKIP 618
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 4 PCKYP 8
PCK P
Sbjct: 614 PCKIP 618
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 4 PCKYP 8
PCK P
Sbjct: 614 PCKIP 618
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 PCKYP 8
PCK P
Sbjct: 614 PCKIP 618
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 4 PCKYP 8
PCK P
Sbjct: 614 PCKIP 618
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 PCKYP 8
PCK P
Sbjct: 614 PCKIP 618
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 4 PCKYP 8
PCK P
Sbjct: 614 PCKIP 618
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 4 PCKYP 8
PCK P
Sbjct: 627 PCKIP 631
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 4 PCKYP 8
PCK P
Sbjct: 627 PCKIP 631
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 4 PCKYP 8
PCK P
Sbjct: 625 PCKIP 629
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 4 PCKYP 8
PCK P
Sbjct: 556 PCKIP 560
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 PCKYP 8
PCK P
Sbjct: 628 PCKIP 632
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 PCKYP 8
PCK P
Sbjct: 628 PCKIP 632
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 PCKYP 8
PCK P
Sbjct: 628 PCKIP 632
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 4 PCKYP 8
PCK P
Sbjct: 620 PCKIP 624
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 PCKYP 8
PCK P
Sbjct: 512 PCKIP 516
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 PCKYP 8
PCK P
Sbjct: 332 PCKIP 336
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 PCKYP 8
PCK P
Sbjct: 612 PCKIP 616
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 PCKYP 8
PCK P
Sbjct: 612 PCKIP 616
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 PCKYP 8
PCK P
Sbjct: 612 PCKIP 616
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 PCKYP 8
PCK P
Sbjct: 381 PCKIP 385
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 4 PCKYP 8
PCK P
Sbjct: 612 PCKIP 616
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 PCKYP 8
PCK P
Sbjct: 612 PCKIP 616
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 PCKYP 8
PCK P
Sbjct: 612 PCKIP 616
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 4 PCKYP 8
PCK P
Sbjct: 332 PCKIP 336
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 4 PCKYP 8
PCK P
Sbjct: 332 PCKIP 336
>sp|PHOSP_HMPVC|PHOSPHOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 NEPCKY 7
NEP KY
Sbjct: 131 NEPGKY 136
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 NEPCKYPGR 10
+E C+Y G+
Sbjct: 138 DESCRYEGQ 146
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 NEPCKYPGR 10
+E C+Y G+
Sbjct: 138 DESCRYEGQ 146
Query: 5 CKYP 8
CKYP
Sbjct: 777 CKYP 780
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 NEPCKYPGR 10
+E C+Y G+
Sbjct: 138 DESCRYEGQ 146
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 PCKYP 8
PCK P
Sbjct: 628 PCKIP 632
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 PCKYP 8
PCK P
Sbjct: 628 PCKIP 632
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 5 CKYPGR 10
CKY G+
Sbjct: 4327 CKYKGK 4332
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 PCKYP 8
PCK P
Sbjct: 628 PCKIP 632
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 PCKYP 8
PCK P
Sbjct: 612 PCKIP 616
>sp|VE8E2_HPV08|PROTEIN E8^E2C|Human papillomavirus type 8
Query: 1 FNEPCKYP 8
F+E KYP
Sbjct: 287 FDETVKYP 294
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 5 CKYPGR 10
CKY G+
Sbjct: 4327 CKYKGK 4332
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 2 NEPCKYP 8
N CKYP
Sbjct: 227 NSICKYP 233
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 2 NEPCKYP 8
N CKYP
Sbjct: 249 NTICKYP 255
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 FNEPC 5
F+EPC
Sbjct: 856 FSEPC 860
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 FNEPC 5
F+EPC
Sbjct: 856 FSEPC 860
>sp|VIF_HV2NZ|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 5 CKYP 8
CKYP
Sbjct: 135 CKYP 138
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 3 EPCKYP 8
+PCK P
Sbjct: 564 DPCKQP 569
>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41
Query: 5 CKYP 8
CKYP
Sbjct: 256 CKYP 259
>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human
Query: 5 CKYP 8
CKYP
Sbjct: 233 CKYP 236
86|Sequence|426|435|KYPGRTKGFG
>sp|GK_HHV1R|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R15)
Query: 3 PGRTKGF 9
PGR+KG
Sbjct: 286 PGRSKGL 292
>sp|GK_HHV1M|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain MP)
Query: 3 PGRTKGF 9
PGR+KG
Sbjct: 286 PGRSKGL 292
>sp|GK_HHV1K|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain KOS)
Query: 3 PGRTKGF 9
PGR+KG
Sbjct: 286 PGRSKGL 292
>sp|GK_HHV19|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R19)
Query: 3 PGRTKGF 9
PGR+KG
Sbjct: 286 PGRSKGL 292
>sp|GK_HHV11|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain 17)
Query: 3 PGRTKGF 9
PGR+KG
Sbjct: 286 PGRSKGL 292
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 3 PGRTKGFG 10
PG GFG
Sbjct: 136 PGHLGGFG 143
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 2 YPGRTKGF 9
YPGR F
Sbjct: 615 YPGRAHTF 622
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 5 RTKGF 9
RTKGF
Sbjct: 332 RTKGF 336
>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 5 RTKGF 9
RTKGF
Sbjct: 332 RTKGF 336
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 3 PGRTKGFG 10
PG+ G G
Sbjct: 504 PGKNNGIG 511
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 KYPGRTK 7
+Y GRTK
Sbjct: 1312 RYGGRTK 1318
>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV
Query: 2 YPGRTKGFG 10
+PG FG
Sbjct: 407 FPGNNMSFG 415
>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate
Query: 2 YPGRTKGFG 10
+PG FG
Sbjct: 407 FPGNNMSFG 415
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 YPGRTKG 8
Y GRTK
Sbjct: 6589 YDGRTKA 6595
87|Sequence|431|440|TKGFGHKPGL
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 4 FGHKPGL 10
F H+PGL
Sbjct: 587 FAHRPGL 593
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 3 GFGHKPGL 10
G GH PG+
Sbjct: 397 GLGHTPGV 404
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 3 GFGHKPGL 10
G GH PG+
Sbjct: 387 GLGHTPGV 394
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 3 GFGHKPGL 10
G GH PG+
Sbjct: 392 GLGHTPGV 399
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 2 KGFGHKPG 9
KG H PG
Sbjct: 143 KGLSHNPG 150
>sp|DR3_HHV6U|UNCHARACTERIZED protein DR3|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 TKGFGHKPG 9
T+GF PG
Sbjct: 158 TRGFARSPG 166
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 5 GHKPG 9
GH+PG
Sbjct: 808 GHRPG 812
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 KGFGHKP 8
+G+G+KP
Sbjct: 132 RGWGNKP 138
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 KGFGHKP 8
+G+G+KP
Sbjct: 132 RGWGNKP 138
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 KGFGHKP 8
+G+G+KP
Sbjct: 132 RGWGNKP 138
>sp|VE2_HPV54|REGULATORY protein E2|Human papillomavirus type 54
Query: 1 TKGFGHK 7
+KG GHK
Sbjct: 65 SKGKGHK 71
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 5 GHKPG 9
GH+PG
Sbjct: 1443 GHRPG 1447
>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)
Query: 1 TKGFGHKPGL 10
++G+G PG+
Sbjct: 102 SRGYGCCPGM 111
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 5 GHKPG 9
GH+PG
Sbjct: 1443 GHRPG 1447
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 5 GHKPG 9
GH+PG
Sbjct: 1443 GHRPG 1447
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 GFGHK 7
G+GHK
Sbjct: 1531 GYGHK 1535
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 GFGHK 7
G+GHK
Sbjct: 1531 GYGHK 1535
>sp|VP35_EBOZ5|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 TKGFGH 6
TKG GH
Sbjct: 5 TKGRGH 10
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 TKGFGHKPG 9
T G+G PG
Sbjct: 376 TGGYGCPPG 384
>sp|VP35_EBOZM|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 TKGFGH 6
TKG GH
Sbjct: 5 TKGRGH 10
88|Sequence|436|445|HKPGLKKHPA
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 3 PGLKKHPA 10
PG+ HPA
Sbjct: 1244 PGMVNHPA 1251
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 KPGLKK 7
KPGLK+
Sbjct: 2523 KPGLKR 2528
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 KPGLKK 7
KPGLK+
Sbjct: 2520 KPGLKR 2525
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 KPGLKK 7
KPGLK+
Sbjct: 2523 KPGLKR 2528
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PGLKKHP 9
PGLK+ P
Sbjct: 1175 PGLKRPP 1181
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 3 PGLKKHP 9
PGLK+ P
Sbjct: 1170 PGLKRPP 1176
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 KPGLKKH 8
KPG KKH
Sbjct: 22 KPGGKKH 28
>sp|VP40_EBORE|MATRIX protein VP40|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 KPGLKKHP 9
+PGL HP
Sbjct: 204 RPGLSLHP 211
>sp|VP40_EBORR|MATRIX protein VP40|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 KPGLKKHP 9
+PGL HP
Sbjct: 204 RPGLSLHP 211
>sp|VP40_EBOSU|MATRIX protein VP40|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 KPGLKKHP 9
+PGL HP
Sbjct: 204 RPGLSFHP 211
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 PGLKKHPA 10
PG + HPA
Sbjct: 2775 PGDEPHPA 2782
>sp|MIR2_HHV8P|E3 ubiquitin-protein ligase MIR2|Human herpesvirus 8 type P
Query: 2 KPGLKKHP 9
KP K HP
Sbjct: 245 KPVRKNHP 252
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 KPGLK 6
KPGLK
Sbjct: 209 KPGLK 213
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 HKPGLKKHP 9
H+P + K P
Sbjct: 304 HRPKIPKFP 312
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 HKPGLKKHP 9
H+P + K P
Sbjct: 304 HRPKIPKFP 312
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 4 GLKKHPA 10
GLK+ PA
Sbjct: 704 GLKRRPA 710
>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 KPGLKKH 8
KPG KKH
Sbjct: 22 KPGGKKH 28
>sp|US10_HHV1F|VIRION protein US10|Human herpesvirus 1 (strain F)
Query: 2 KPGLKKHP 9
PG + HP
Sbjct: 43 SPGFRDHP 50
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 KPGLKKH 8
+PG KKH
Sbjct: 22 RPGGKKH 28
>sp|US10_HHV11|VIRION protein US10|Human herpesvirus 1 (strain 17)
Query: 2 KPGLKKHP 9
PG + HP
Sbjct: 43 SPGFRDHP 50
89|Sequence|441|450|KKHPAAPPGG
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 4 PAAPPGG 10
P APPGG
Sbjct: 67 PTAPPGG 73
>sp|MC014_MCV1|PROTEIN MC014|Molluscum contagiosum virus subtype 1
Query: 2 KHPAAPPGG 10
+HP APPGG
Sbjct: 116 RHPKAPPGG 124
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 2 KHPAAPP 8
K P+APP
Sbjct: 1704 KSPSAPP 1710
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 PAAPPGG 10
PAAPP G
Sbjct: 124 PAAPPSG 130
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 KHPAAP 7
+HP+AP
Sbjct: 83 QHPSAP 88
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 KHPAAP 7
+HP+AP
Sbjct: 82 QHPSAP 87
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 KHPAAP 7
+HP+AP
Sbjct: 82 QHPSAP 87
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 2 KHPAAPPGG 10
KH A PGG
Sbjct: 58 KHTLASPGG 66
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 HPAAPP 8
HP +PP
Sbjct: 812 HPESPP 817
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 HPAAPPGG 10
PAAPP G
Sbjct: 123 RPAAPPSG 130
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 HPAAPP 8
HP+APP
Sbjct: 459 HPSAPP 464
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 KHPAAPPG 9
+ PAAPP
Sbjct: 1677 EQPAAPPA 1684
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 PAAPPGG 10
P APP G
Sbjct: 121 PTAPPSG 127
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 1 KKHPAAP 7
+ HPA P
Sbjct: 66 RHHPATP 72
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 PAAPPGG 10
P APP G
Sbjct: 124 PTAPPSG 130
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 PAAPPGG 10
P APP G
Sbjct: 124 PTAPPSG 130
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 PAAPPGG 10
P APP G
Sbjct: 124 PTAPPSG 130
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 PAAPPGG 10
P APP G
Sbjct: 121 PTAPPSG 127
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 PAAPPGG 10
P APP G
Sbjct: 124 PTAPPSG 130
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 PAAPPGG 10
P APP G
Sbjct: 124 PTAPPSG 130
>sp|NEC2_HCMVM|NUCLEAR egress protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 KHPAAPP 8
+HP +PP
Sbjct: 321 RHPPSPP 327
>sp|NEC2_HCMVA|NUCLEAR egress protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 KHPAAPP 8
+HP +PP
Sbjct: 320 RHPPSPP 326
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 PAAPPGG 10
P APP G
Sbjct: 124 PTAPPSG 130
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 2 KHPAAPP 8
+HP PP
Sbjct: 369 QHPPLPP 375
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 2 KHPAAPP 8
+HP PP
Sbjct: 369 QHPPLPP 375
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 3 HPAAPPGG 10
HP PGG
Sbjct: 571 HPLPAPGG 578
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 PAAPPGG 10
P APP G
Sbjct: 124 PTAPPSG 130
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 2 KHPAAPPG 9
KHP PG
Sbjct: 415 KHPLIEPG 422
>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 KKHPAAPP 8
+K P APP
Sbjct: 459 RKEPTAPP 466
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 3 HPAAPP 8
HP PP
Sbjct: 633 HPPLPP 638
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 HPAAPPG 9
HP+ PP
Sbjct: 1055 HPSTPPA 1061
>sp|Z_GTOVV|RING finger protein Z|Guanarito mammarenavirus (isolate
Query: 2 KHPAAPP 8
+ P+APP
Sbjct: 88 EEPSAPP 94
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 6 APPGG 10
APPGG
Sbjct: 28 APPGG 32
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KKHPAAPPGG 10
+ HP P GG
Sbjct: 231 RHHPYRPRGG 240
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 6 APPGG 10
APPGG
Sbjct: 28 APPGG 32
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 HPAAPPGG 10
HP+ PGG
Sbjct: 601 HPSQTPGG 608
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 KKHPAAPPG 9
K HP P G
Sbjct: 819 KYHPLTPRG 827
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 KKHPAA 6
+KHPAA
Sbjct: 587 RKHPAA 592
>sp|VSGP_EBOZM|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 4 PAAPPG 9
PAAP G
Sbjct: 123 PAAPDG 128
>sp|VSGP_EBOZ5|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 4 PAAPPG 9
PAAP G
Sbjct: 123 PAAPDG 128
>sp|VSGP_EBOEC|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 4 PAAPPG 9
PAAP G
Sbjct: 123 PAAPDG 128
>sp|VP35_EBORR|POLYMERASE cofactor VP35|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 KKHPAAPPG 9
K+H PPG
Sbjct: 153 KEHKQPPPG 161
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KKHPAAPP 8
KKH PP
Sbjct: 807 KKHQKEPP 814
>sp|VSGP_EBOG4|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 4 PAAPPG 9
PAAP G
Sbjct: 123 PAAPDG 128
>sp|VP35_EBORE|POLYMERASE cofactor VP35|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 KKHPAAPPG 9
K+H PPG
Sbjct: 153 KEHKQPPPG 161
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KKHPAAPP 8
KKH PP
Sbjct: 801 KKHQKEPP 808
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KKHPAAPP 8
KKH PP
Sbjct: 799 KKHQKEPP 806
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KKHPAAPP 8
KKH PP
Sbjct: 818 KKHQKEPP 825
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KKHPAAPP 8
KKH PP
Sbjct: 806 KKHQKEPP 813
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KKHPAAPP 8
KKH PP
Sbjct: 806 KKHQKEPP 813
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 HPAAPPGG 10
P APP G
Sbjct: 123 RPTAPPSG 130
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KKHPAAPP 8
KKH PP
Sbjct: 810 KKHQKEPP 817
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KKHPAAPP 8
KKH PP
Sbjct: 808 KKHQKEPP 815
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KKHPAAPP 8
KKH PP
Sbjct: 802 KKHQKEPP 809
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KKHPAAPP 8
KKH PP
Sbjct: 806 KKHQKEPP 813
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KKHPAAPP 8
KKH PP
Sbjct: 811 KKHQKEPP 818
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KKHPAAPP 8
KKH PP
Sbjct: 806 KKHQKEPP 813
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KKHPAAPP 8
KKH PP
Sbjct: 806 KKHQKEPP 813
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KKHPAAPP 8
KKH PP
Sbjct: 818 KKHQKEPP 825
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 HPAAPPGG 10
P APP G
Sbjct: 123 RPTAPPSG 130
90|Sequence|446|455|APPGGRPFTC
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 APPGGRPFT 9
A PG RPFT
Sbjct: 1133 AQPGARPFT 1141
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 PGGRPF 8
PGG+PF
Sbjct: 1159 PGGKPF 1164
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 PGGRPF 8
PGG+PF
Sbjct: 1159 PGGKPF 1164
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 APPGGRPFT 9
APPG R T
Sbjct: 1113 APPGARSLT 1121
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 APPGGRPFT 9
APPG R T
Sbjct: 1113 APPGARSLT 1121
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 PPGGRPFTC 10
PP GR F C
Sbjct: 545 PPSGRWFGC 553
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 PPGGRPFTC 10
PP GR F C
Sbjct: 545 PPSGRWFGC 553
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 APPGGRPFT 9
APPG R T
Sbjct: 1115 APPGARSLT 1123
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 APPGGRPFT 9
APPG R T
Sbjct: 1113 APPGSRSLT 1121
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 APPGGRPFT 9
APPG R T
Sbjct: 1113 APPGARSMT 1121
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 APPGGRPFT 9
APPG R T
Sbjct: 1113 APPGARSMT 1121
>sp|HBZ_HTL1C|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 1 APPGGR 6
PPGG+
Sbjct: 64 GPPGGK 69
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 PPGGRPFTC 10
PP GR F C
Sbjct: 546 PPQGRWFGC 554
>sp|NSS_RVFVZ|NON-STRUCTURAL protein S|Rift valley fever virus (strain
Query: 1 APPGGRPF 8
APP +PF
Sbjct: 79 APPPAKPF 86
>sp|RL11_HCMVM|MEMBRANE glycoprotein RL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 GGRPFTC 10
GG FTC
Sbjct: 95 GGATFTC 101
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 APPGGR 6
APP GR
Sbjct: 126 APPSGR 131
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 APPGGR 6
APP GR
Sbjct: 126 APPSGR 131
>sp|MC014_MCV1|PROTEIN MC014|Molluscum contagiosum virus subtype 1
Query: 1 APPGGR 6
APPGGR
Sbjct: 120 APPGGR 125
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 APPGGRPF 8
A PG PF
Sbjct: 1006 AQPGAHPF 1013
>sp|NS1_I07A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 4 GGRPFT 9
GG PFT
Sbjct: 210 GGPPFT 215
>sp|NS1_I00A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/New
Query: 4 GGRPFT 9
GG PFT
Sbjct: 210 GGPPFT 215
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 APPGGRPFT 9
+PPG R T
Sbjct: 1118 SPPGARSLT 1126
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 APPGGRPFT 9
+PPG R T
Sbjct: 1117 SPPGARSLT 1125
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 APPGGRPF 8
A PG PF
Sbjct: 1067 AQPGAHPF 1074
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 PPGGR 6
PPGG+
Sbjct: 466 PPGGK 470
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 PGGRPFTC 10
P G P TC
Sbjct: 531 PPGAPATC 538
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PPGGRPFT 9
PPG R T
Sbjct: 1114 PPGARSLT 1121
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 1 APPGGRPF 8
A PG PF
Sbjct: 1138 AQPGAHPF 1145
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 APPGGRPF 8
APP RP+
Sbjct: 138 APPNHRPW 145
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 3 PGGRPFTC 10
P G P TC
Sbjct: 126 PKGAPNTC 133
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 1 APPGGRP 7
APP G+P
Sbjct: 19 APPAGQP 25
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 1 APPGGRP 7
APP G+P
Sbjct: 19 APPAGQP 25
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 3 PGGRPFT 9
P G PFT
Sbjct: 2357 PRGLPFT 2363
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 5 GRPFTC 10
G PF C
Sbjct: 629 GEPFRC 634
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 APPGGR 6
APP GR
Sbjct: 126 APPSGR 131
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 APPGGRP 7
A PGG+P
Sbjct: 9 ASPGGKP 15
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 GGRPFTC 10
GGR F C
Sbjct: 516 GGRVFHC 522
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 5 GRPFTC 10
G PF C
Sbjct: 629 GEPFRC 634
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 1 APPGGRP 7
APP G+P
Sbjct: 19 APPAGQP 25
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 GGRPFTC 10
GGR F C
Sbjct: 516 GGRVFHC 522
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 PPGGRPFT 9
PP G P T
Sbjct: 385 PPTGNPTT 392
>sp|CAPSH_ADE04|HEXON protein|Human adenovirus E serotype 4
Query: 3 PGGRPFTC 10
P G P TC
Sbjct: 25 PKGAPNTC 32
91|Sequence|451|460|RPFTCATCGK
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RPFTCATCGK 10
R TC CGK
Sbjct: 385 RTVTCWNCGK 394
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 FTCATCG 9
F C TCG
Sbjct: 411 FACTTCG 417
Query: 3 FTCATCG 9
F C +CG
Sbjct: 3386 FLCGSCG 3392
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 FTCATCG 9
F C TCG
Sbjct: 411 FACTTCG 417
Query: 3 FTCATCG 9
F C +CG
Sbjct: 3386 FLCGSCG 3392
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RPFTCATCGK 10
+ F C CGK
Sbjct: 387 KAFKCWNCGK 396
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RPFTCATCGK 10
+ F C CGK
Sbjct: 385 KTFKCWNCGK 394
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 5 CATCGK 10
C TCGK
Sbjct: 49 CKTCGK 54
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 5 CATCGK 10
C TCGK
Sbjct: 49 CKTCGK 54
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 CATCGK 10
C TCGK
Sbjct: 49 CKTCGK 54
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 5 CATCGK 10
C TCGK
Sbjct: 49 CKTCGK 54
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 5 CATCGK 10
C TCGK
Sbjct: 49 CKTCGK 54
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 RPFTCATCGK 10
R TC CGK
Sbjct: 385 RTVTCWNCGK 394
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 TCATCGK 10
TC CGK
Sbjct: 389 TCWNCGK 395
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 TCATCGK 10
TC CGK
Sbjct: 389 TCWNCGK 395
>sp|RP07_VACCT|DNA-DIRECTED RNA polymerase 7 kDa|Vaccinia virus (strain Tian Tan)
Query: 3 FTCATCGK 10
C+TCGK
Sbjct: 5 LVCSTCGK 12
>sp|RP07_VACCC|DNA-DIRECTED RNA polymerase 7 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 FTCATCGK 10
C+TCGK
Sbjct: 5 LVCSTCGK 12
>sp|RP07_VACCA|DNA-DIRECTED RNA polymerase 7 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 FTCATCGK 10
C+TCGK
Sbjct: 5 LVCSTCGK 12
>sp|RP07_MONPV|DNA-DIRECTED RNA polymerase 7 kDa|Monkeypox virus (MPXV)
Query: 3 FTCATCGK 10
C+TCGK
Sbjct: 5 LVCSTCGK 12
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 RPFTCATCGK 10
+ F C CGK
Sbjct: 385 KTFKCWNCGK 394
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 RPFTCATCGK 10
+ F C CGK
Sbjct: 387 KAFKCWNCGK 396
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 FTCATCG 9
F C +CG
Sbjct: 3474 FLCGSCG 3480
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 FTCATCG 9
F C +CG
Sbjct: 3444 FLCGSCG 3450
>sp|RP07_VARV|DNA-DIRECTED RNA polymerase 7 kDa|Variola virus
Query: 5 CATCGK 10
C+TCGK
Sbjct: 7 CSTCGK 12
>sp|RP07_VAR67|DNA-DIRECTED RNA polymerase 7 kDa|Variola virus (isolate
Query: 5 CATCGK 10
C+TCGK
Sbjct: 7 CSTCGK 12
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 FTCATCG 9
F C +CG
Sbjct: 3424 FLCGSCG 3430
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 3 FTCATC 8
+ CATC
Sbjct: 421 YACATC 426
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 FTCATCG 9
F C +CG
Sbjct: 3444 FLCGSCG 3450
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 FTCATCG 9
F C +CG
Sbjct: 3474 FLCGSCG 3480
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 FTCATCG 9
F C +CG
Sbjct: 3424 FLCGSCG 3430
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 FTCATCG 9
F C +CG
Sbjct: 3390 FLCGSCG 3396
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 3 FTCATC 8
+ CATC
Sbjct: 421 YACATC 426
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 FTCATCG 9
F C +CG
Sbjct: 3390 FLCGSCG 3396
>sp|RP07_YLDV|DNA-DIRECTED RNA polymerase 7 kDa|Yaba-like disease virus (YLDV)
Query: 5 CATCGK 10
C+TCG+
Sbjct: 7 CSTCGR 12
>sp|HEMA_I40A0|HEMAGGLUTININ A virus (strain A/Hickox/1940
Query: 2 PFTCATCGK 10
PFT C K
Sbjct: 314 PFTIGECPK 322
>sp|RP07_MCV1|DNA-DIRECTED RNA polymerase 7 kDa|Molluscum contagiosum virus subtype 1
Query: 3 FTCATCGK 10
CA+CG+
Sbjct: 5 LVCASCGR 12
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 2 PFTCAT 7
PF+C T
Sbjct: 213 PFSCMT 218
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 2 PFTCATCGK 10
P C TC K
Sbjct: 495 PVLCTTCRK 503
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 2 PFTCAT 7
PF+C T
Sbjct: 213 PFSCMT 218
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 2 PFTCATCGK 10
PF+ TC K
Sbjct: 649 PFSVLTCKK 657
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 2 PFTCATCGK 10
PF+ TC K
Sbjct: 649 PFSVLTCKK 657
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 2 PFTC 5
PFTC
Sbjct: 311 PFTC 314
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 CATCGK 10
C TCG+
Sbjct: 1752 CKTCGQ 1757
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 CATCGK 10
C TCG+
Sbjct: 1752 CKTCGQ 1757
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 TCATCGK 10
TC CGK
Sbjct: 389 TCWNCGK 395
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 TCATCGK 10
TC CGK
Sbjct: 389 TCWNCGK 395
>sp|M1_I97A1|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I97A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I96A0|MATRIX protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I89A2|MATRIX protein 1|Influenza A virus (strain A/Beijing/353/1989
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I88A7|MATRIX protein 1|Influenza A virus (strain A/Wisconsin/3523/1988
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I88A5|MATRIX protein 1|Influenza A virus (strain A/Swine/Iowa/17672/1988
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I88A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/8/1988
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I85A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Netherlands/12/1985
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I85A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I83A8|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I82A9|MATRIX protein 1|Influenza A virus (strain A/Philippines/2/1982
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I82A7|MATRIX protein 1|Influenza A virus (strain A/Swine/Hong
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I82A2|MATRIX protein 1|Influenza A virus (strain A/Camel/Mongolia/1982
Query: 3 FTCATC 8
CATC
Sbjct: 3 LVCATC 8
>sp|M1_I81A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Ontario/2/1981
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I80A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/4/1980
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I80A2|MATRIX protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I79A0|MATRIX protein 1|Influenza A virus (strain A/Bangkok/1/1979
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I78A8|MATRIX protein 1|Influenza A virus (strain A/Memphis/18/1978
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I78A7|MATRIX protein 1|Influenza A virus (strain A/Memphis/2/1978
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I78A3|MATRIX protein 1|Influenza A virus (strain A/Mallard/New
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I77AC|MATRIX protein 1|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I77A9|MATRIX protein 1|Influenza A virus (strain A/Equine/New
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I77A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I76A6|MATRIX protein 1|Influenza A virus (strain A/Memphis/110/1976
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I75A0|MATRIX protein 1|Influenza A virus (strain A/Beijing/39/1975
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I73A5|MATRIX protein 1|Influenza A virus (strain A/Port
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I72A8|MATRIX protein 1|Influenza A virus (strain A/Udorn/1972
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I72A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/101/1972
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I72A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/102/1972
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I72A2|MATRIX protein 1|Influenza A virus (strain A/Udorn/307/1972
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I71A1|MATRIX protein 1|Influenza A virus (strain A/Memphis/1/1971
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I70A0|MATRIX protein 1|Influenza A virus (strain A/Qu/7/1970
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I69A0|MATRIX protein 1|Influenza A virus (strain A/England/878/1969
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I68A6|MATRIX protein 1|Influenza A virus (strain A/Northern
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I68A4|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I68A0|MATRIX protein 1|Influenza A virus (strain A/Aichi/2/1968
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I67A2|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I67A0|MATRIX protein 1|Influenza A virus (strain A/Tokyo/3/1967
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I61A1|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I60A0|MATRIX protein 1|Influenza A virus (strain A/Ann
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I59A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I57A5|MATRIX protein 1|Influenza A virus (strain A/Singapore/1/1957
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I57A3|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I57A2|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I57A1|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/1957
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I57A0|MATRIX protein 1|Influenza A virus (strain A/Japan/305/1957
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I56A3|MATRIX protein 1|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I54A2|MATRIX protein 1|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I54A1|MATRIX protein 1|Influenza A virus (strain A/Swine/May/1954
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I51A0|MATRIX protein 1|Influenza A virus (strain A/USA:Albany/12/1951
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I50A0|MATRIX protein 1|Influenza A virus (strain A/Fort
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I45A0|MATRIX protein 1|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I43A0|MATRIX protein 1|Influenza A virus (strain A/USA:Iowa/1943
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I40A0|MATRIX protein 1|Influenza A virus (strain A/Hickox/1940
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I37A0|MATRIX protein 1|Influenza A virus (strain A/Swine/29/1937
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I36A0|MATRIX protein 1|Influenza A virus (strain A/Henry/1936
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I35A3|MATRIX protein 1|Influenza A virus (strain A/USA:Phila/1935
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I34A1|MATRIX protein 1|Influenza A virus (strain A/Puerto
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I33A0|MATRIX protein 1|Influenza A virus (strain A/Wilson-Smith/1933
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I30A0|MATRIX protein 1|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I18A0|MATRIX protein 1|Influenza A virus (strain A/Brevig
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I06A0|MATRIX protein 1|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I05A1|MATRIX protein 1|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I03A1|MATRIX protein 1|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I03A0|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I02A7|MATRIX protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 3 FTCATC 8
CATC
Sbjct: 144 LVCATC 149
>sp|M1_I02A6|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I02A5|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I02A4|MATRIX protein 1|Influenza A virus (strain A/Silky
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I02A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I02A2|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I02A1|MATRIX protein 1|Influenza A virus (strain A/Guinea
Query: 3 FTCATC 8
CATC
Sbjct: 139 LVCATC 144
>sp|M1_I02A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I01A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I01A2|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I01A0|MATRIX protein 1|Influenza A virus (strain A/Silky
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I00A0|MATRIX protein 1|Influenza A virus (strain A/Duck/Hong
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I000X|MATRIX protein 1|Influenza A virus (strain A/X-31
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|M1_I000F|MATRIX protein 1|Influenza A virus (strain A/Chicken/Weybridge
Query: 3 FTCATC 8
CATC
Sbjct: 146 LVCATC 151
>sp|X_HBVE1|PROTEIN X|Hepatitis B virus genotype E
Query: 1 RPFTCATCGK 10
RP + +CG+
Sbjct: 19 RPVSAESCGR 28
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 PFTCAT 7
PF+C T
Sbjct: 1013 PFSCKT 1018
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 CATC 8
CATC
Sbjct: 305 CATC 308
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 CATC 8
CATC
Sbjct: 305 CATC 308
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 CATC 8
CATC
Sbjct: 305 CATC 308
>sp|TRM2_HCMVM|TRIPARTITE terminase subunit 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 CATC 8
CATC
Sbjct: 117 CATC 120
>sp|TRM2_HCMVA|TRIPARTITE terminase subunit 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 CATC 8
CATC
Sbjct: 117 CATC 120
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 CATC 8
CATC
Sbjct: 2939 CATC 2942
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 CATC 8
CATC
Sbjct: 2938 CATC 2941
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 CATC 8
CATC
Sbjct: 2939 CATC 2942
>sp|M1_I96A3|MATRIX protein 1|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 5 CATC 8
CATC
Sbjct: 148 CATC 151
>sp|M1_I96A2|MATRIX protein 1|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 5 CATC 8
CATC
Sbjct: 148 CATC 151
>sp|M1_I83A1|MATRIX protein 1|Influenza A virus (strain A/Chile/1/1983
Query: 5 CATC 8
CATC
Sbjct: 148 CATC 151
>sp|M1_I80AA|MATRIX protein 1|Influenza A virus (strain A/India/6263/1980
Query: 5 CATC 8
CATC
Sbjct: 148 CATC 151
>sp|M1_I77AB|MATRIX protein 1|Influenza A virus (strain A/USSR/90/1977
Query: 5 CATC 8
CATC
Sbjct: 148 CATC 151
>sp|M1_I77AA|MATRIX protein 1|Influenza A virus (strain A/Brazil/11/1978
Query: 5 CATC 8
CATC
Sbjct: 148 CATC 151
>sp|M1_I68A5|MATRIX protein 1|Influenza A virus (strain A/Korea/426/1968
Query: 5 CATC 8
CATC
Sbjct: 148 CATC 151
>sp|M1_I07A0|MATRIX protein 1|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 5 CATC 8
CATC
Sbjct: 145 CATC 148
>sp|M1_I01A1|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 5 CATC 8
CATC
Sbjct: 148 CATC 151
>sp|M1_I00A1|MATRIX protein 1|Influenza A virus (strain A/New
Query: 5 CATC 8
CATC
Sbjct: 148 CATC 151
>sp|X_HBVE2|PROTEIN X|Hepatitis B virus genotype E
Query: 1 RPFTCATCGK 10
RP + +CG+
Sbjct: 19 RPVSAESCGR 28
>sp|X_HBVE3|PROTEIN X|Hepatitis B virus genotype E
Query: 1 RPFTCATCGK 10
RP + +CG+
Sbjct: 19 RPVSAESCGR 28
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 PFTCAT 7
PF+C T
Sbjct: 1013 PFSCKT 1018
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 FTCATC 8
F+C TC
Sbjct: 182 FSCLTC 187
>sp|OX2V_HHV6U|PUTATIVE OX-2 membrane glycoprotein homolog|Human herpesvirus 6A (strain
Query: 4 TCATC 8
TC TC
Sbjct: 121 TCLTC 125
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 5 CATCG 9
CA CG
Sbjct: 1051 CAQCG 1055
92|Sequence|456|465|ATCGKSFQLQ
>sp|UL117_HCMVM|PROTEIN UL117|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ATCGKSFQ 8
A+CG +FQ
Sbjct: 292 ASCGNAFQ 299
>sp|UL117_HCMVA|PROTEIN UL117|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ATCGKSFQ 8
A+CG +FQ
Sbjct: 291 ASCGNAFQ 298
>sp|PG145_VARV|TRANSCRIPT termination protein OPG145|Variola virus
Query: 2 TCGKSFQL 9
TCG+S L
Sbjct: 18 TCGQSLSL 25
>sp|PG145_VAR67|TRANSCRIPT termination protein OPG145|Variola virus (isolate
Query: 2 TCGKSFQL 9
TCG+S L
Sbjct: 18 TCGQSLSL 25
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 3 CGKSFQLQ 10
CG FQ+Q
Sbjct: 165 CGFHFQVQ 172
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 3 CGKSFQLQ 10
CG FQ+Q
Sbjct: 166 CGFHFQVQ 173
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 3 CGKSFQLQ 10
CG FQ+Q
Sbjct: 165 CGFHFQVQ 172
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 TCGKSFQLQ 10
TCGKS + Q
Sbjct: 1685 TCGKSPKPQ 1693
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 TCGKSFQLQ 10
TCGKS + Q
Sbjct: 1685 TCGKSPKPQ 1693
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 ATCGKSFQLQ 10
++CG+ Q+Q
Sbjct: 1073 SSCGRRKQIQ 1082
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 ATCGKSFQLQ 10
++CG+ Q+Q
Sbjct: 1073 SSCGRRKQIQ 1082
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 ATCGKSFQLQ 10
++CG+ Q+Q
Sbjct: 1073 SSCGRRKQIQ 1082
>sp|ORF49_HHV8P|PROTEIN ORF49|Human herpesvirus 8 type P
Query: 1 ATCGKSFQ 8
TC SFQ
Sbjct: 172 GTCAPSFQ 179
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 TCGKSFQL 9
T G SFQ+
Sbjct: 2218 TAGNSFQI 2225
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 CGKSFQLQ 10
CGK F Q
Sbjct: 1136 CGKKFDDQ 1143
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 CGKSFQLQ 10
CGK F Q
Sbjct: 1136 CGKKFDDQ 1143
93|Sequence|461|470|SFQLQVSLSA
***** No hits found ******
94|Sequence|466|475|VSLSAHQRSC
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 4 SAHQRSC 10
S HQR C
Sbjct: 656 STHQRVC 662
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 2 SLSAHQRSC 10
SLSA R+C
Sbjct: 719 SLSAFYRTC 727
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 5 AHQRSC 10
AH RSC
Sbjct: 341 AHDRSC 346
>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka
Query: 2 SLSAHQRSC 10
+L HQR C
Sbjct: 413 ALITHQREC 421
>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)
Query: 2 SLSAHQRSC 10
+L HQR C
Sbjct: 413 ALITHQREC 421
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VSLSAHQRSC 10
+ LS H R C
Sbjct: 858 LDLSIHGRPC 867
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VSLSAHQRSC 10
+ LS H R C
Sbjct: 849 LDLSIHGRPC 858
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VSLSAHQRSC 10
+ LS H R C
Sbjct: 839 LDLSIHGRPC 848
>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 LSAHQRSC 10
+ HQR+C
Sbjct: 174 MHKHQRNC 181
>sp|GK_HHV1K|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain KOS)
Query: 3 LSAHQRSC 10
++ HQR C
Sbjct: 137 VALHQRRC 144
>sp|GK_HHV19|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R19)
Query: 3 LSAHQRSC 10
++ HQR C
Sbjct: 137 VALHQRRC 144
95|Sequence|471|480|HQRSCGAPDG
>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka
Query: 1 HQRSCG 6
HQR CG
Sbjct: 417 HQRECG 422
>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 HQRSCG 6
HQR CG
Sbjct: 417 HQRECG 422
>sp|US25_HCMVA|UNCHARACTERIZED protein US25|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 QRSCGAPDG 10
QR+CG P G
Sbjct: 110 QRACGGPIG 118
>sp|ORF2_TTVVG|UNCHARACTERIZED ORF2 protein|Torque teno virus (isolate Human/Ghana/GH1/1996)
Query: 1 HQRSCGAPDG 10
H CG PD
Sbjct: 54 HAAMCGCPDA 63
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 HQRSCGAP 8
+ ++CGAP
Sbjct: 562 YTKTCGAP 569
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 4 SCGAPDG 10
+CG P+G
Sbjct: 771 ACGEPNG 777
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 4 SCGAPDG 10
+CG P+G
Sbjct: 771 ACGEPNG 777
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 HQRSCGAP 8
+ ++CGAP
Sbjct: 561 YTKTCGAP 568
>sp|UL129_HCMVA|UNCHARACTERIZED protein UL129|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HQRSCGAPD 9
H+RS G P+
Sbjct: 108 HRRSSGMPE 116
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 1 HQRSCGAPD 9
+R C APD
Sbjct: 430 EKRRCSAPD 438
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 4 SCGAPDG 10
+CG P+G
Sbjct: 771 ACGDPNG 777
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 RSCGAP 8
++CGAP
Sbjct: 563 KTCGAP 568
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 HQRSCGAP 8
+ ++CGAP
Sbjct: 561 YVKTCGAP 568
>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)
Query: 4 SCGAPD 9
+CG PD
Sbjct: 170 NCGIPD 175
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 5 CGAPD 9
CG PD
Sbjct: 435 CGPPD 439
>sp|UL20_HHV2H|PROTEIN UL20|Human herpesvirus 2 (strain HG52)
Query: 2 QRSCGAPDG 10
+ +CG DG
Sbjct: 17 EAACGGEDG 25
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 5 CGAPD 9
CG PD
Sbjct: 309 CGLPD 313
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 RSCGAP 8
++CGAP
Sbjct: 564 KTCGAP 569
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 QRSCGAPDG 10
+R+C P+G
Sbjct: 1234 RRACAQPEG 1242
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 RSCGAP 8
++CGAP
Sbjct: 564 KTCGAP 569
>sp|E1A_ADE02|EARLY E1A protein|Human adenovirus C serotype 2
Query: 1 HQRSCGAPD 9
H+R+ G PD
Sbjct: 160 HRRNTGDPD 168
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 RSCGAP 8
++CGAP
Sbjct: 564 KTCGAP 569
>sp|E1A_ADE05|EARLY E1A protein|Human adenovirus C serotype 5
Query: 1 HQRSCGAPD 9
H+R+ G PD
Sbjct: 160 HRRNTGDPD 168
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 RSCGAP 8
++CGAP
Sbjct: 564 KTCGAP 569
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 RSCGAP 8
++CGAP
Sbjct: 564 KTCGAP 569
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 RSCGAP 8
++CGAP
Sbjct: 563 KTCGAP 568
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 RSCGAP 8
++CGAP
Sbjct: 562 KTCGAP 567
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 RSCGAP 8
++CGAP
Sbjct: 562 KTCGAP 567
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 RSCGAP 8
++CGAP
Sbjct: 562 KTCGAP 567
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 RSCGAP 8
++CGAP
Sbjct: 562 KTCGAP 567
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 RSCGAP 8
++CGAP
Sbjct: 563 KTCGAP 568
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 RSCGAP 8
++CGAP
Sbjct: 562 KTCGAP 567
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 RSCGAP 8
++CGAP
Sbjct: 563 KTCGAP 568
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 RSCGAP 8
++CGAP
Sbjct: 563 KTCGAP 568
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 RSCGAP 8
++CGAP
Sbjct: 563 KTCGAP 568
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 RSCGAP 8
++CGAP
Sbjct: 564 KTCGAP 569
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 RSCGAP 8
++CGAP
Sbjct: 562 KTCGAP 567
>sp|ORF2_TTVA1|UNCHARACTERIZED ORF2 protein|Torque teno virus 1 (isolate
Query: 1 HQRSCGAPDG 10
H CG PD
Sbjct: 106 HAAMCGCPDA 115
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 3 RSCGAP 8
++CGAP
Sbjct: 564 KTCGAP 569
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 3 RSCGAP 8
++CGAP
Sbjct: 564 KTCGAP 569
96|Sequence|476|485|GAPDGSGPGT
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PDGSGPG 9
PDG PG
Sbjct: 562 PDGLAPG 568
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PDGSGPG 9
PDG PG
Sbjct: 562 PDGLAPG 568
>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PDGSGPGT 10
P GSGP T
Sbjct: 238 PAGSGPNT 245
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 GAPDGSGPG 9
G+ GSGPG
Sbjct: 497 GSCVGSGPG 505
>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PDGSGPGT 10
P GSGP T
Sbjct: 238 PAGSGPNT 245
>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 1 GAPDGSGP 8
G PD SGP
Sbjct: 60 GNPDVSGP 67
>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)
Query: 1 GAPDGSGP 8
G PD SGP
Sbjct: 60 GNPDVSGP 67
>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)
Query: 1 GAPDGSGP 8
G PD SGP
Sbjct: 60 GNPDVSGP 67
>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)
Query: 1 GAPDGSGP 8
G PD SGP
Sbjct: 60 GNPDVSGP 67
>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 1 GAPDGSGP 8
G PD SGP
Sbjct: 60 GNPDVSGP 67
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 1 GAPDGSGP 8
G PD GP
Sbjct: 310 GLPDSLGP 317
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 3 PDGSGPGT 10
PDG P T
Sbjct: 618 PDGGYPAT 625
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 4 DGSGPGT 10
DG PGT
Sbjct: 596 DGETPGT 602
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 3 PDGSGPGT 10
PDG P T
Sbjct: 618 PDGGYPAT 625
>sp|UNG_HHV7J|URACIL-DNA glycosylase|Human herpesvirus 7 (strain JI)
Query: 3 PDGSGPG 9
PDG G G
Sbjct: 94 PDGRGHG 100
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 1 GAPDGSGPG 9
G P G GP
Sbjct: 198 GHPRGPGPA 206
>sp|UNG_HHV6Z|URACIL-DNA glycosylase|Human herpesvirus 6B (strain Z29)
Query: 3 PDGSGPG 9
PDG G G
Sbjct: 96 PDGRGCG 102
>sp|UNG_HHV6U|URACIL-DNA glycosylase|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PDGSGPG 9
PDG G G
Sbjct: 96 PDGRGCG 102
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 PDGSGP 8
P GSGP
Sbjct: 259 PSGSGP 264
>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)
Query: 1 GAPDGSGP 8
G PD SGP
Sbjct: 60 GNPDVSGP 67
>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 1 GAPDGSGP 8
G PD SGP
Sbjct: 60 GNPDVSGP 67
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 3 PDGSGP 8
P GSGP
Sbjct: 259 PSGSGP 264
>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)
Query: 1 GAPDGSGP 8
G PD SGP
Sbjct: 60 GNPDVSGP 67
>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)
Query: 1 GAPDGSGP 8
G PD SGP
Sbjct: 60 GNPDVSGP 67
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 1 GAPDGSGP 8
G PD SGP
Sbjct: 60 GNPDVSGP 67
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 PDGSGP 8
P GSGP
Sbjct: 259 PSGSGP 264
>sp|NCAP_MEASC|NUCLEOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 1 GAPDGSGP 8
G PD SGP
Sbjct: 60 GNPDVSGP 67
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 3 PDGSGPG 9
PD SG G
Sbjct: 822 PDASGEG 828
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 PDGSGP 8
P GSGP
Sbjct: 259 PSGSGP 264
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 3 PDGSGPG 9
PD SG G
Sbjct: 823 PDASGEG 829
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 3 PDGSGPG 9
PD SG G
Sbjct: 823 PDASGEG 829
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 3 PDGSGPG 9
PD SG G
Sbjct: 823 PDASGEG 829
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 1 GAPDGSGPG 9
G PDG PG
Sbjct: 63 GQPDGGAPG 71
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 1 GAPDGSGP 8
G P GSGP
Sbjct: 48 GLPRGSGP 55
>sp|UL135_HCMVT|PROTEIN UL135|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 PDGSGPGT 10
PD S PGT
Sbjct: 116 PDVSTPGT 123
>sp|UL135_HCMVM|PROTEIN UL135|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PDGSGPGT 10
PD S PGT
Sbjct: 116 PDVSTPGT 123
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 APDGSGP 8
AP GS P
Sbjct: 299 APTGSSP 305
97|Sequence|481|490|SGPGTGGGGS
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GPGTGGGG 9
GPG G GG
Sbjct: 782 GPGEGPGG 789
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GPGTGGGG 9
GPG G GG
Sbjct: 782 GPGEGPGG 789
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 GPGTGGGG 9
GPG G GG
Sbjct: 782 GPGEGPGG 789
>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SGPGTGG 7
SGP TGG
Sbjct: 241 SGPNTGG 247
Query: 2 GPGTGGGG 9
GP GG G
Sbjct: 247 GPRPGGAG 254
>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SGPGTGG 7
SGP TGG
Sbjct: 241 SGPNTGG 247
Query: 2 GPGTGGGG 9
GP GG G
Sbjct: 247 GPRPGGAG 254
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SGPGTGGGGS 10
S PGTG G+
Sbjct: 115 SSPGTGVAGA 124
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SGPGTGGGGS 10
S PGTG G+
Sbjct: 115 SSPGTGVAGA 124
>sp|VE2_HPV04|REGULATORY protein E2|Human papillomavirus 4
Query: 1 SGPGTG 6
SGPG+G
Sbjct: 264 SGPGSG 269
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 SGPGTGGG 8
+GPG GG
Sbjct: 867 AGPGYGGA 874
>sp|M2_I56A3|MATRIX protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 2 GPGTGG 7
GP TGG
Sbjct: 62 GPSTGG 67
>sp|M2_I02A4|MATRIX protein 2|Influenza A virus (strain A/Silky
Query: 2 GPGTGG 7
GP TGG
Sbjct: 62 GPSTGG 67
>sp|M2_I02A2|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 GPGTGG 7
GP TGG
Sbjct: 62 GPSTGG 67
>sp|M2_I02A1|MATRIX protein 2|Influenza A virus (strain A/Guinea
Query: 2 GPGTGG 7
GP TGG
Sbjct: 55 GPSTGG 60
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 2 GPGTGGGGS 10
G G+G GG+
Sbjct: 319 GMGSGSGGT 327
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PGTGGGG 9
PG GGG
Sbjct: 1195 PGETGGG 1201
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PGTGGGG 9
PG GGG
Sbjct: 1195 PGETGGG 1201
>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7
Query: 1 SGPGTGGGG 9
S PG GGG
Sbjct: 68 SRPGPSGGG 76
>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48
Query: 1 SGPGTGG 7
+GPG GG
Sbjct: 127 AGPGIGG 133
>sp|US13_HCMVM|MEMBRANE protein US13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 GGGGS 10
GGGGS
Sbjct: 257 GGGGS 261
>sp|US13_HCMVA|UNCHARACTERIZED protein HVLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 GGGGS 10
GGGGS
Sbjct: 257 GGGGS 261
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 1 SGPGTGGGG 9
+GP T G G
Sbjct: 517 TGPDTEGNG 525
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 3 PGTGGGG 9
P GGGG
Sbjct: 399 PDNGGGG 405
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 3 PGTGGGGS 10
PGT GG+
Sbjct: 5 PGTEDGGA 12
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 2 GPGTGGG 8
GP GGG
Sbjct: 849 GPMEGGG 855
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 GTGGGG 9
GTGG G
Sbjct: 415 GTGGDG 420
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 GTGGGG 9
GTGG G
Sbjct: 415 GTGGDG 420
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 3 PGTGGGG 9
PG GGG
Sbjct: 113 PGPFGGG 119
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 3 PGTGGGG 9
PG GGG
Sbjct: 113 PGPFGGG 119
>sp|VE2_HPV09|REGULATORY protein E2|Human papillomavirus 9
Query: 1 SGPGTGGGG 9
S P TG GG
Sbjct: 201 SSPPTGDGG 209
>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 4 GTGGGG 9
GTGG G
Sbjct: 149 GTGGNG 154
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 2 GPGTGGG 8
GP GGG
Sbjct: 848 GPMEGGG 854
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 2 GPGTGGG 8
GP GGG
Sbjct: 850 GPMEGGG 856
>sp|VE2_HPV65|REGULATORY protein E2|Human papillomavirus 65
Query: 1 SGPGTG 6
SGPG G
Sbjct: 264 SGPGPG 269
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 3 PGTGGGG 9
PG GGG
Sbjct: 113 PGPFGGG 119
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 2 GPGTGGG 8
GP GGG
Sbjct: 848 GPMEGGG 854
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 2 GPGTGGG 8
GP GGG
Sbjct: 848 GPMEGGG 854
98|Sequence|486|495|GGGGSGSGGG
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 2 GGGSGSGG 9
G GSGSGG
Sbjct: 319 GMGSGSGG 326
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 GGSGSGG 9
GG GSGG
Sbjct: 1658 GGDGSGG 1664
Query: 1 GGGGSG 6
GG GSG
Sbjct: 1658 GGDGSG 1663
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 GGSGSGG 9
GG GSGG
Sbjct: 1658 GGDGSGG 1664
Query: 1 GGGGSG 6
GG GSG
Sbjct: 1658 GGDGSG 1663
>sp|PG160_VARV|DNA packaging protein OPG160|Variola virus
Query: 3 GGSGSG 8
GGSGSG
Sbjct: 25 GGSGSG 30
Query: 1 GGGGSG 6
GG GSG
Sbjct: 25 GGSGSG 30
>sp|PG160_VAR67|DNA packaging protein OPG160|Variola virus (isolate
Query: 3 GGSGSG 8
GGSGSG
Sbjct: 25 GGSGSG 30
Query: 1 GGGGSG 6
GG GSG
Sbjct: 25 GGSGSG 30
>sp|PG160_VACCC|DNA packaging protein OPG160|Vaccinia virus (strain Copenhagen)
Query: 3 GGSGSG 8
GGSGSG
Sbjct: 25 GGSGSG 30
Query: 1 GGGGSG 6
GG GSG
Sbjct: 25 GGSGSG 30
>sp|PG160_MONPV|DNA packaging protein OPG160|Monkeypox virus (MPXV)
Query: 3 GGSGSG 8
GGSGSG
Sbjct: 55 GGSGSG 60
Query: 1 GGGGSG 6
GG GSG
Sbjct: 55 GGSGSG 60
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 2 GGGSGSGGG 10
GG S GGG
Sbjct: 135 GGNSQDGGG 143
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 2 GGGSGSG 8
GGGSG G
Sbjct: 349 GGGSGRG 355
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 1 GGGGSG 6
GGGG G
Sbjct: 156 GGGGQG 161
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GGGGSGS 7
GGG SG+
Sbjct: 178 GGGASGT 184
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GGGGSGS 7
GGG SG+
Sbjct: 178 GGGASGT 184
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 2 GGGSGSGGG 10
G GS +G G
Sbjct: 268 GAGSAAGSG 276
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 1 GGGGSG 6
GGGG G
Sbjct: 159 GGGGHG 164
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 1 GGGGSGS 7
G GGSG+
Sbjct: 650 GAGGSGA 656
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 1 GGGGSGS 7
G GGSG+
Sbjct: 650 GAGGSGA 656
>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)
Query: 2 GGGSGSGGG 10
GGG G+ G
Sbjct: 151 GGGKGASNG 159
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 1 GGGGSGS 7
G GGSG+
Sbjct: 645 GAGGSGA 651
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 1 GGGGSGS 7
G GGSG+
Sbjct: 650 GAGGSGA 656
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 4 GSGSGG 9
GSG GG
Sbjct: 1722 GSGEGG 1727
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 4 GSGSGG 9
GSG GG
Sbjct: 1721 GSGEGG 1726
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 4 GSGSGG 9
GSG GG
Sbjct: 1721 GSGEGG 1726
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 GSGSGG 9
G GSGG
Sbjct: 1670 GDGSGG 1675
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 GSGSGG 9
G GSGG
Sbjct: 1670 GDGSGG 1675
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 GSGSGG 9
G GSGG
Sbjct: 1670 GDGSGG 1675
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 GSGSGG 9
G GSGG
Sbjct: 1670 GDGSGG 1675
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 GSGSGG 9
G GSGG
Sbjct: 1670 GDGSGG 1675
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 GSGSGG 9
G GSGG
Sbjct: 1670 GDGSGG 1675
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 GSGSGG 9
G GSGG
Sbjct: 1670 GDGSGG 1675
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 4 GSGSGG 9
G GSGG
Sbjct: 1704 GDGSGG 1709
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 4 GSGSGG 9
G GSGG
Sbjct: 1704 GDGSGG 1709
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 4 GSGSGG 9
G GSGG
Sbjct: 1704 GDGSGG 1709
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 4 GSGSGG 9
G GSGG
Sbjct: 1704 GDGSGG 1709
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 4 GSGSGG 9
G GSGG
Sbjct: 1704 GDGSGG 1709
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 4 GSGSGG 9
G GSGG
Sbjct: 1704 GDGSGG 1709
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 4 GSGSGG 9
G GSGG
Sbjct: 1704 GDGSGG 1709
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 4 GSGSGG 9
G GSGG
Sbjct: 1704 GDGSGG 1709
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 4 GSGSGG 9
G GSGG
Sbjct: 1705 GDGSGG 1710
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 4 GSGSGG 9
G GSGG
Sbjct: 1704 GDGSGG 1709
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 4 GSGSGG 9
G GSGG
Sbjct: 1704 GDGSGG 1709
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 4 GSGSGG 9
G GSGG
Sbjct: 1705 GDGSGG 1710
>sp|VL2_HPV60|MINOR capsid protein L2|Human papillomavirus type 60
Query: 2 GGGSGSGGG 10
GG SG G G
Sbjct: 140 GGDSGPGLG 148
>sp|UL140_HCMVM|PROTEIN UL140|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GGGSGSGG 9
G +GSGG
Sbjct: 16 GAKNGSGG 23
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GGGGSGSGGG 10
G G S + GG
Sbjct: 230 GAGTSSANGG 239
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 3 GGSGSGG 9
GG GSG
Sbjct: 278 GGMGSGA 284
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 3 GGSGSGG 9
GG GSG
Sbjct: 278 GGMGSGA 284
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GGGSGSGG 9
G G G GG
Sbjct: 782 GPGEGPGG 789
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GGGSGSGG 9
G G G GG
Sbjct: 782 GPGEGPGG 789
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 GGGSGSGG 9
G G G GG
Sbjct: 782 GPGEGPGG 789
99|Sequence|491|500|GSGGGGGGSG
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 3 GGGGGGSG 10
GG GGSG
Sbjct: 2517 AGGDGGSG 2524
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 5 GGGGSG 10
GGGG G
Sbjct: 156 GGGGQG 161
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 2 SGGGGG 7
+GGGGG
Sbjct: 401 NGGGGG 406
Query: 4 GGGGG 8
GGGGG
Sbjct: 402 GGGGG 406
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 1 GSGGGGGGS 9
G G G GG+
Sbjct: 319 GMGSGSGGT 327
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 5 GGGGSG 10
GGGG G
Sbjct: 159 GGGGHG 164
>sp|PG160_VARV|DNA packaging protein OPG160|Variola virus
Query: 5 GGGGSG 10
GG GSG
Sbjct: 25 GGSGSG 30
>sp|PG160_VAR67|DNA packaging protein OPG160|Variola virus (isolate
Query: 5 GGGGSG 10
GG GSG
Sbjct: 25 GGSGSG 30
>sp|PG160_VACCC|DNA packaging protein OPG160|Vaccinia virus (strain Copenhagen)
Query: 5 GGGGSG 10
GG GSG
Sbjct: 25 GGSGSG 30
>sp|PG160_MONPV|DNA packaging protein OPG160|Monkeypox virus (MPXV)
Query: 5 GGGGSG 10
GG GSG
Sbjct: 55 GGSGSG 60
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 1 GSGGGGGGSG 10
GSG GG+G
Sbjct: 170 GSGRNVGGNG 179
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 5 GGGGSG 10
G GGSG
Sbjct: 650 GAGGSG 655
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 2 SGGGGGGSG 10
SGG GG G
Sbjct: 129 SGGYGGNPG 137
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 SGGGGGGSG 10
SGGG G+G
Sbjct: 3003 SGGGVEGTG 3011
>sp|VIE2_HCMVT|VIRAL transcription factor IE2|Human cytomegalovirus (strain Towne)
Query: 1 GSGGGGGGS 9
G GG GG +
Sbjct: 294 GRGGFGGAA 302
>sp|VIE2_HCMVM|VIRAL transcription factor IE2|Human cytomegalovirus (strain Merlin)
Query: 1 GSGGGGGGS 9
G GG GG +
Sbjct: 295 GRGGFGGAA 303
>sp|VIE2_HCMVA|VIRAL transcription factor IE2|Human cytomegalovirus (strain AD169)
Query: 1 GSGGGGGGS 9
G GG GG +
Sbjct: 295 GRGGFGGAA 303
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 5 GGGGSG 10
G GGSG
Sbjct: 650 GAGGSG 655
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 4 GGGGGSG 10
GGG G G
Sbjct: 349 GGGSGRG 355
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 5 GGGGSG 10
G GGSG
Sbjct: 645 GAGGSG 650
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 5 GGGGSG 10
G GGSG
Sbjct: 650 GAGGSG 655
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 5 GGGGSG 10
GG GSG
Sbjct: 1658 GGDGSG 1663
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 5 GGGGSG 10
GG GSG
Sbjct: 1658 GGDGSG 1663
>sp|IE247_HCMVT|45 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 1 GSGGGGGGS 9
G GG GG +
Sbjct: 125 GRGGFGGAA 133
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 SGGGGGGSG 10
SGGG G+G
Sbjct: 3034 SGGGVEGAG 3042
100|Sequence|496|505|GGGSGGGSAR
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 2 GGSGGGSAR 10
GG G GSAR
Sbjct: 89 GGRGPGSAR 97
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 2 GGSGGGSA 9
GGS GGS+
Sbjct: 607 GGSHGGSS 614
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GGSGGGSA 9
GGS GGS+
Sbjct: 607 GGSHGGSS 614
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GGGSGGG 7
GGG+ GG
Sbjct: 422 GGGTSGG 428
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GGGSGGG 7
GGG+ GG
Sbjct: 422 GGGTSGG 428
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 1 GGGSGGGSA 9
G GSGG +A
Sbjct: 321 GSGSGGTNA 329
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 GGGSGGGSA 9
G GSGG +A
Sbjct: 1670 GDGSGGMTA 1678
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 GGGSGGGSA 9
G GSGG +A
Sbjct: 1670 GDGSGGMTA 1678
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 GGGSGGGSA 9
G GSGG +A
Sbjct: 1670 GDGSGGMTA 1678
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 GGGSGGGSA 9
G GSGG +A
Sbjct: 1670 GDGSGGMTA 1678
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 GGGSGGGSA 9
G GSGG +A
Sbjct: 1670 GDGSGGMTA 1678
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 GGGSGGGSA 9
G GSGG +A
Sbjct: 1659 GDGSGGMTA 1667
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 GGGSGGGSA 9
G GSGG +A
Sbjct: 1659 GDGSGGMTA 1667
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 GGGSGGGSA 9
G GSGG +A
Sbjct: 1670 GDGSGGITA 1678
>sp|PG160_VARV|DNA packaging protein OPG160|Variola virus
Query: 2 GGSGGG 7
GGSG G
Sbjct: 25 GGSGSG 30
>sp|PG160_VAR67|DNA packaging protein OPG160|Variola virus (isolate
Query: 2 GGSGGG 7
GGSG G
Sbjct: 25 GGSGSG 30
>sp|PG160_VACCC|DNA packaging protein OPG160|Vaccinia virus (strain Copenhagen)
Query: 2 GGSGGG 7
GGSG G
Sbjct: 25 GGSGSG 30
>sp|PG160_MONPV|DNA packaging protein OPG160|Monkeypox virus (MPXV)
Query: 2 GGSGGG 7
GGSG G
Sbjct: 55 GGSGSG 60
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 GGSGGG 7
GGS GG
Sbjct: 739 GGSNGG 744
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 2 GGSGGGS 8
GGS GG+
Sbjct: 418 GGSDGGN 424
>sp|ORF24_TTVV3|ORF2/4 protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 1 GGGSGGGSAR 10
GG +GG R
Sbjct: 162 GGDTGGPGTR 171
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 GGGSGGGS 8
G GSGG S
Sbjct: 1704 GDGSGGIS 1711
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 GGGSGGGS 8
G GSGG S
Sbjct: 1704 GDGSGGIS 1711
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 GGGSGGGS 8
G GSGG S
Sbjct: 1704 GDGSGGIS 1711
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 GGGSGGGS 8
G GSGG S
Sbjct: 1704 GDGSGGIS 1711
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 GGGSGGGS 8
G GSGG S
Sbjct: 1704 GDGSGGIS 1711
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 GGGSGGGS 8
G GSGG S
Sbjct: 1704 GDGSGGIS 1711
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 GGGSGGGS 8
G GSGG S
Sbjct: 1704 GDGSGGIS 1711
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 GGGSGGGS 8
G GSGG S
Sbjct: 1704 GDGSGGIS 1711
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 GGGSGGGS 8
G GSGG S
Sbjct: 1705 GDGSGGIS 1712
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 GGGSGGGS 8
G GSGG S
Sbjct: 1704 GDGSGGIS 1711
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 GGGSGGGS 8
G GSGG S
Sbjct: 1704 GDGSGGIS 1711
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 GGGSGGGS 8
G GSGG S
Sbjct: 1705 GDGSGGIS 1712
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 1 GGGSGGGSA 9
GGG GSA
Sbjct: 308 GGGRDVGSA 316
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 GGGSGG 6
G GSGG
Sbjct: 1670 GDGSGG 1675
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 GGGSGGGS 8
GGG GG+
Sbjct: 1308 GGGCSGGA 1315
101|Sequence|501|510|GGSARDGSAL
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 GGSARDG 7
GG+ RDG
Sbjct: 1684 GGNGRDG 1690
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 GGSARDG 7
GG+ RDG
Sbjct: 1670 GGNGRDG 1676
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 GGSARDG 7
GG+ RDG
Sbjct: 1677 GGNGRDG 1683
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 GGSARDG 7
GG+ RDG
Sbjct: 1677 GGNGRDG 1683
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 GGSARDG 7
GG+ RDG
Sbjct: 1673 GGNGRDG 1679
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 3 SARDGSA 9
SARDG A
Sbjct: 1345 SARDGEA 1351
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GGSARDGS 8
GG++++GS
Sbjct: 452 GGNSKNGS 459
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 1 GGSARDG 7
GG+++DG
Sbjct: 135 GGNSQDG 141
102|Sequence|506|515|DGSALRCGEC
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 SALRCGEC 10
+ LRCG+C
Sbjct: 4982 TVLRCGDC 4989
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 SALRCGEC 10
++LRCG C
Sbjct: 5347 TSLRCGSC 5354
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 SALRCGEC 10
++LRCG C
Sbjct: 5367 TSLRCGSC 5374
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 SALRCGEC 10
++LRCG C
Sbjct: 5309 TSLRCGSC 5316
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 SALRCGEC 10
++LRCG C
Sbjct: 5397 TSLRCGSC 5404
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 5 LRCGEC 10
+RCGEC
Sbjct: 367 VRCGEC 372
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 5 LRCGEC 10
+RCGEC
Sbjct: 367 VRCGEC 372
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 5 LRCGEC 10
+RCGEC
Sbjct: 367 VRCGEC 372
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 5 LRCGEC 10
+RCGEC
Sbjct: 367 VRCGEC 372
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 SALRCGEC 10
+ LRCG+C
Sbjct: 5007 TVLRCGDC 5014
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 DGSALRCGEC 10
D + RCGEC
Sbjct: 1022 DIKSSRCGEC 1031
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 SALRCGEC 10
++LRCG C
Sbjct: 5336 TSLRCGAC 5343
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 SALRCGEC 10
++LRCG C
Sbjct: 5322 TSLRCGTC 5329
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 SALRCGEC 10
++LRCG C
Sbjct: 5313 TSLRCGAC 5320
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 DGSALRCG 8
DGS RCG
Sbjct: 380 DGSRTRCG 387
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 1 DGSALRCG 8
DGS RCG
Sbjct: 380 DGSRTRCG 387
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 4 ALRCGEC 10
AL+C EC
Sbjct: 490 ALQCHEC 496
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 3 SALRCGEC 10
S+ RC +C
Sbjct: 228 SSYRCSDC 235
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 4 ALRCGEC 10
AL+C EC
Sbjct: 490 ALQCHEC 496
>sp|UL81_HCMVA|UNCHARACTERIZED protein UL81|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 SALRCGEC 10
SA RCG C
Sbjct: 27 SAARCGPC 34
>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 2 GSALRCGEC 10
G+A++ G C
Sbjct: 249 GAAVKAGAC 257
>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)
Query: 2 GSALRCGEC 10
G+A++ G C
Sbjct: 249 GAAVKAGAC 257
>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 1 DGSALRCGEC 10
DGS + G C
Sbjct: 252 DGSPMISGPC 261
>sp|TAX_HTL32|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 1 DGSALRCGEC 10
DGS + G C
Sbjct: 252 DGSPMISGPC 261
>sp|VE6_HPV34|PROTEIN E6|Human papillomavirus type 34
Query: 5 LRCGEC 10
+RCG+C
Sbjct: 102 IRCGKC 107
103|Sequence|511|520|RCGECGRCFT
>sp|NEF_HV2CA|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 RCGECGRCF 9
R G CG C+
Sbjct: 24 RAGTCGECY 32
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 RCGECGRCF 9
+ GEC +C+
Sbjct: 555 KTGECSKCY 563
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 1 RCGECGRCF 9
+ GEC +C+
Sbjct: 553 KTGECSKCY 561
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 1 RCGEC 5
RCGEC
Sbjct: 368 RCGEC 372
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 1 RCGEC 5
RCGEC
Sbjct: 368 RCGEC 372
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 RCGEC 5
RCGEC
Sbjct: 368 RCGEC 372
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 RCGEC 5
RCGEC
Sbjct: 368 RCGEC 372
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 1 RCGECGRCF 9
RC CGR +
Sbjct: 222 RCEHCGRLY 230
>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 CGECGRCF 9
C + GRCF
Sbjct: 66 CSQYGRCF 73
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 CGECGRCF 9
C + GRCF
Sbjct: 66 CSQYGRCF 73
>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 2 CGECGRCF 9
C + GRCF
Sbjct: 66 CSQYGRCF 73
>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 CGECGRCF 9
C + GRCF
Sbjct: 66 CSQYGRCF 73
>sp|NSP1_ROTHU|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 2 CGECGRCF 9
C + GRCF
Sbjct: 66 CSQYGRCF 73
>sp|NSP1_ROTHJ|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 2 CGECGRCF 9
C + GRCF
Sbjct: 66 CSQYGRCF 73
>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 2 CGECGRCF 9
C + GRCF
Sbjct: 66 CSQYGRCF 73
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 RCGECGRCF 9
RC CGR +
Sbjct: 152 RCEYCGRLY 160
>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 CGECGRCF 9
C + GRCF
Sbjct: 66 CSQYGRCF 73
>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 2 CGECGRCF 9
C + GRCF
Sbjct: 66 CSQYGRCF 73
>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 2 CGECGRCF 9
C + GRCF
Sbjct: 66 CSQYGRCF 73
>sp|ORF5_MERS1|NON-STRUCTURAL protein ORF5|Middle East respiratory syndrome-related coronavirus
Query: 1 RCGECGRCF 9
RC C RCF
Sbjct: 160 RC-SCSRCF 167
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 RCGECGRC 8
+ G+CG C
Sbjct: 2932 KLGKCGSC 2939
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 RCGECGRC 8
+ G+CG C
Sbjct: 2932 KLGKCGSC 2939
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 RCGECGRC 8
+ G+CG C
Sbjct: 2932 KLGKCGSC 2939
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 RCGECGRC 8
+ G+CG C
Sbjct: 2932 KLGKCGSC 2939
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 RCGECGRC 8
+ G+CG C
Sbjct: 2932 KLGKCGSC 2939
>sp|GK_HHV19|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R19)
Query: 3 GECGRC 8
G CGRC
Sbjct: 294 GVCGRC 299
>sp|GK_HHV1K|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain KOS)
Query: 3 GECGRC 8
G CGRC
Sbjct: 294 GVCGRC 299
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 3 GECGRCFT 10
GEC CFT
Sbjct: 566 GECPYCFT 573
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 3 GECGRC 8
G CGRC
Sbjct: 294 GVCGRC 299
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 3 GECGRCFT 10
GEC CFT
Sbjct: 566 GECPYCFT 573
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 3 GECGRCFT 10
GEC CFT
Sbjct: 566 GECPYCFT 573
>sp|V_NIPAV|NON-STRUCTURAL protein V|Nipah virus
Query: 1 RCGEC-GRCF 9
+CGEC CF
Sbjct: 444 QCGECPTECF 453
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 3 GECGRCFT 10
GEC CFT
Sbjct: 566 GECPYCFT 573
>sp|GK_HHV1R|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R15)
Query: 3 GECGRC 8
G CGRC
Sbjct: 294 GVCGRC 299
>sp|GK_HHV1M|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain MP)
Query: 3 GECGRC 8
G CGRC
Sbjct: 294 GVCGRC 299
>sp|GK_HHV11|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain 17)
Query: 3 GECGRC 8
G CGRC
Sbjct: 294 GVCGRC 299
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 RCGECGRCFT 10
R G+CG T
Sbjct: 1705 RAGQCGGVIT 1714
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 RCGECGRCFT 10
R G+CG T
Sbjct: 1705 RAGQCGGVIT 1714
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 RCGECGRCFT 10
R G+CG T
Sbjct: 1706 RAGQCGGVIT 1715
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 RCGECGRCFT 10
R G+CG T
Sbjct: 1706 RAGQCGGVIT 1715
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 RCGECGRCFT 10
R G+CG T
Sbjct: 1708 RAGQCGGVIT 1717
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 RCGECGRCFT 10
R G+CG T
Sbjct: 1708 RAGQCGGVIT 1717
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 RCGECGRCFT 10
R G+CG T
Sbjct: 1713 RAGQCGGVIT 1722
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 CGECG 6
CG CG
Sbjct: 338 CGSCG 342
Query: 2 CGECG 6
CG CG
Sbjct: 3392 CGSCG 3396
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RCGECGR 7
RC CG+
Sbjct: 391 RCWNCGK 397
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RCGECGR 7
RC CG+
Sbjct: 390 RCWNCGK 396
>sp|NSP1_ROTH6|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 2 CGECGRCF 9
C + RCF
Sbjct: 66 CSQYSRCF 73
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 RCGECGRCFT 10
R G+CG T
Sbjct: 1705 RAGQCGGIIT 1714
>sp|NSP1_ROTHD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 CGECGRCF 9
C + RCF
Sbjct: 66 CSQYNRCF 73
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 2 CGECG 6
CG CG
Sbjct: 1060 CGACG 1064
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 2 CGECG 6
CG CG
Sbjct: 1060 CGACG 1064
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 2 CGECG 6
CG CG
Sbjct: 338 CGSCG 342
Query: 2 CGECG 6
CG CG
Sbjct: 3392 CGSCG 3396
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 CGECG 6
CG CG
Sbjct: 3426 CGSCG 3430
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 CGECG 6
CG CG
Sbjct: 3446 CGSCG 3450
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 CGECG 6
CG CG
Sbjct: 3476 CGSCG 3480
>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 2 CGECGRCF 9
C + RCF
Sbjct: 66 CSQYSRCF 73
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CGECG 6
CG CG
Sbjct: 3388 CGSCG 3392
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 RCGECGRCFT 10
R G+CG T
Sbjct: 1697 RAGQCGGVVT 1706
>sp|VE6_HPV39|PROTEIN E6|Human papillomavirus 39
Query: 3 GECGRCFT 10
G+C RC+T
Sbjct: 136 GQCRRCWT 143
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CGECG 6
CG CG
Sbjct: 3388 CGSCG 3392
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 CGECG 6
CG CG
Sbjct: 3446 CGSCG 3450
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 CGECG 6
CG CG
Sbjct: 3476 CGSCG 3480
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 CGECG 6
CG CG
Sbjct: 3426 CGSCG 3430
>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)
Query: 2 CGECGR 7
CGEC R
Sbjct: 269 CGECPR 274
>sp|VE2_HPV66|REGULATORY protein E2|Human papillomavirus 66
Query: 3 GECGRC 8
GECG C
Sbjct: 141 GECGWC 146
>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RC--GECGRCF 9
RC GEC C+
Sbjct: 204 RCDNGECVTCY 214
>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RC--GECGRCF 9
RC GEC C+
Sbjct: 204 RCDNGECVTCY 214
>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 RC--GECGRCF 9
RC GEC C+
Sbjct: 204 RCDNGECVTCY 214
>sp|POLG_ECHO9|GENOME polyprotein|Echo 9 virus (EV-9) (Coxsackievirus
Query: 1 RCGECG 6
R G+CG
Sbjct: 165 RAGQCG 170
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 RCGECG 6
R G+CG
Sbjct: 1692 RAGQCG 1697
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 RCGECG 6
R G+CG
Sbjct: 1691 RAGQCG 1696
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 RCGECG 6
R G+CG
Sbjct: 1693 RAGQCG 1698
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 RCGECG 6
R G+CG
Sbjct: 1691 RAGQCG 1696
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 RCGECG 6
R G+CG
Sbjct: 1701 RAGQCG 1706
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 RCGECG 6
R G+CG
Sbjct: 1689 RAGQCG 1694
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 RCGECG 6
R G+CG
Sbjct: 1694 RAGQCG 1699
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 RCGECG 6
R G+CG
Sbjct: 1682 RAGQCG 1687
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 RCGECG 6
R G+CG
Sbjct: 1682 RAGQCG 1687
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 RCGECG 6
R G+CG
Sbjct: 1683 RAGQCG 1688
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 RCGECG 6
R G+CG
Sbjct: 1681 RAGQCG 1686
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 RCGECG 6
R G+CG
Sbjct: 1681 RAGQCG 1686
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 RCGECG 6
R G+CG
Sbjct: 1683 RAGQCG 1688
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 RCGECG 6
R G+CG
Sbjct: 1683 RAGQCG 1688
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 RCGECG 6
R G+CG
Sbjct: 1685 RAGQCG 1690
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 RCGECG 6
R G+CG
Sbjct: 1680 RAGQCG 1685
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 RCGECG 6
R G+CG
Sbjct: 1699 RAGQCG 1704
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 RCGECGRCF 9
RC C R +
Sbjct: 91 RCEHCARFY 99
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 RCGECGR 7
RC CG+
Sbjct: 391 RCWNCGK 397
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 RCGECGR 7
RC CG+
Sbjct: 390 RCWNCGK 396
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 3 GECGRC 8
G C RC
Sbjct: 194 GTCARC 199
>sp|V_MEASC|NON-STRUCTURAL protein V|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 CGECGR 7
CGEC R
Sbjct: 269 CGECPR 274
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RCGECGR 7
+C CG+
Sbjct: 394 KCSNCGK 400
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 1 RCGECGRCF 9
R G CG F
Sbjct: 403 RAGRCGILF 411
>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RCGECGR 7
+C CG+
Sbjct: 394 KCSNCGK 400
>sp|PG021_VAR67|HOST range factor p28|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 ECGRCF 9
ECG C+
Sbjct: 172 ECGICY 177
>sp|V_MEASE|NON-STRUCTURAL protein V|Measles virus (strain Edmonston) (MeV)
Query: 2 CGECGR 7
CGEC R
Sbjct: 269 CGECPR 274
>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 CGEC 5
CGEC
Sbjct: 443 CGEC 446
>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)
Query: 2 CGEC 5
CGEC
Sbjct: 224 CGEC 227
>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)
Query: 2 CGECGR 7
CGEC R
Sbjct: 269 CGECPR 274
>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 CGECGR 7
CGEC R
Sbjct: 269 CGECPR 274
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 1 RCGECGR 7
RC +C R
Sbjct: 231 RCSDCVR 237
>sp|PG021_VACC8|HOST range factor p28|Vaccinia virus (strain LC16m8) (VACV)
Query: 4 ECGRCF 9
ECG C+
Sbjct: 169 ECGICY 174
>sp|PG021_VACC0|HOST range factor p28|Vaccinia virus (strain LC16m0) (VACV)
Query: 4 ECGRCF 9
ECG C+
Sbjct: 169 ECGICY 174
>sp|PG021_MONPZ|HOST range factor p28|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 4 ECGRCF 9
ECG C+
Sbjct: 172 ECGICY 177
>sp|PG021_MONPV|HOST range factor p28|Monkeypox virus (MPXV)
Query: 4 ECGRCF 9
ECG C+
Sbjct: 172 ECGICY 177
>sp|PG021_CWPXB|HOST range factor p28|Cowpox virus (strain Brighton Red)
Query: 4 ECGRCF 9
ECG C+
Sbjct: 172 ECGICY 177
>sp|PG021_CWPXG|HOST range factor p28|Cowpox virus (strain GRI-90 /
Query: 4 ECGRCF 9
ECG C+
Sbjct: 172 ECGICY 177
>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P
Query: 2 CGECGRCFT 10
C ECG C
Sbjct: 295 CMECGHCLN 303
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 CGECGRCF 9
CG G C+
Sbjct: 2589 CGRGGWCY 2596
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 CGECGRCF 9
CG G C+
Sbjct: 2588 CGRGGWCY 2595
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 CGECGRCF 9
CG G C+
Sbjct: 2589 CGRGGWCY 2596
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 CGECGRCF 9
CG G C+
Sbjct: 2588 CGRGGWCY 2595
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 CGECGRCF 9
CG G C+
Sbjct: 2588 CGRGGWCY 2595
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 CGECGRCF 9
CG G C+
Sbjct: 2589 CGRGGWCY 2596
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 CGECGRCF 9
CG G C+
Sbjct: 2588 CGRGGWCY 2595
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 CGECGRCF 9
CG G C+
Sbjct: 2588 CGRGGWCY 2595
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 CGECGRCF 9
CG G C+
Sbjct: 2588 CGRGGWCY 2595
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 CGECGRCF 9
CG G C+
Sbjct: 2610 CGRGGWCY 2617
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 CGECGRCF 9
CG G C+
Sbjct: 2607 CGRGGWCY 2614
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 CGECGRCF 9
CG G C+
Sbjct: 2610 CGRGGWCY 2617
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 2 CGECGRCF 9
C + RCF
Sbjct: 66 CSQYNRCF 73
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 CGRCFT 10
CG C T
Sbjct: 692 CGMCMT 697
>sp|NSP1_ROTH3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 2 CGECGRCF 9
C + RCF
Sbjct: 66 CSQYNRCF 73
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 CGECGRCF 9
CG G C+
Sbjct: 2589 CGRGGWCY 2596
>sp|V_PI2H|NON-STRUCTURAL protein V|Human parainfluenza 2 virus (HPIV-2)
Query: 2 CGEC 5
CGEC
Sbjct: 218 CGEC 221
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 2 CGECGRCFT 10
C C +C T
Sbjct: 810 CDHCSKCAT 818
>sp|V_PI2HT|NON-STRUCTURAL protein V|Human parainfluenza 2 virus (strain
Query: 2 CGEC 5
CGEC
Sbjct: 218 CGEC 221
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CGECGRCF 9
C EC R F
Sbjct: 903 CVECRRMF 910
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 5 CGRCFT 10
CG C T
Sbjct: 773 CGMCVT 778
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 2 CGECGRCF 9
CG+ CF
Sbjct: 142 CGDPRNCF 149
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 CGECGRCF 9
CG+ CF
Sbjct: 142 CGDPRNCF 149
>sp|VE6_HPV52|PROTEIN E6|Human papillomavirus 52
Query: 1 RCGECGR 7
RC EC R
Sbjct: 135 RCSECWR 141
>sp|UL92_HCMVM|UNCHARACTERIZED protein UL92|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 CGRCF 9
C RCF
Sbjct: 29 CTRCF 33
>sp|UL92_HCMVA|PROTEIN UL92|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 CGRCF 9
C RCF
Sbjct: 29 CTRCF 33
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 1 RCGECGRC 8
+C E RC
Sbjct: 495 QCAEISRC 502
104|Sequence|516|525|GRCFTRPAHL
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 GRCFTRP 7
GRC++RP
Sbjct: 572 GRCYSRP 578
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GRCFTRP 7
GRC++RP
Sbjct: 572 GRCYSRP 578
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GRCFTRP 7
GRC++RP
Sbjct: 571 GRCYSRP 577
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 2 RCFTRP 7
RC++RP
Sbjct: 504 RCYSRP 509
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 RCFTRPA 8
RCF RPA
Sbjct: 105 RCFLRPA 111
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 RCFTRP 7
RC++RP
Sbjct: 607 RCYSRP 612
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 RCFTRPA 8
RCF RPA
Sbjct: 105 RCFLRPA 111
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 2 RCFTRP 7
RC++RP
Sbjct: 607 RCYSRP 612
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RCFTR 6
RCFTR
Sbjct: 259 RCFTR 263
>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)
Query: 2 RCFTR 6
RCFTR
Sbjct: 259 RCFTR 263
>sp|KITH_HHV23|THYMIDINE kinase|Human herpesvirus 2 (strain 333)
Query: 1 GRCFTRPAH 9
GR +RP+H
Sbjct: 25 GRAASRPSH 33
>sp|KITH_HHV2H|THYMIDINE kinase|Human herpesvirus 2 (strain HG52)
Query: 1 GRCFTRPAH 9
GR +RP+H
Sbjct: 25 GRAASRPSH 33
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 1 GRCFTRP 7
G C++RP
Sbjct: 594 GACYSRP 600
Query: 2 RCFTRP 7
RC TRP
Sbjct: 132 RCPTRP 137
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 1 GRCFTRP 7
G C++RP
Sbjct: 594 GACYSRP 600
Query: 2 RCFTRP 7
RC TRP
Sbjct: 132 RCPTRP 137
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 1 GRCFTRP 7
G C++RP
Sbjct: 593 GACYSRP 599
Query: 2 RCFTRP 7
RC TRP
Sbjct: 131 RCPTRP 136
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 1 GRCFTRP 7
G C++RP
Sbjct: 594 GACYSRP 600
Query: 2 RCFTRP 7
RC TRP
Sbjct: 132 RCPTRP 137
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 1 GRCFTRP 7
G C++RP
Sbjct: 591 GTCYSRP 597
Query: 2 RCFTRP 7
RC TRP
Sbjct: 127 RCPTRP 132
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 1 GRCFTRP 7
G C++RP
Sbjct: 591 GTCYSRP 597
Query: 2 RCFTRP 7
RC TRP
Sbjct: 127 RCPTRP 132
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 2 RCFTRP 7
+CF RP
Sbjct: 680 QCFKRP 685
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 2 RCFTRP 7
+CF RP
Sbjct: 684 QCFKRP 689
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 GRCFTRPAH 9
RCFT+ H
Sbjct: 913 SRCFTKKCH 921
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GRCFTRPAH 9
RCFT+ H
Sbjct: 913 SRCFTKKCH 921
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GRCFTRPAH 9
RCFT+ H
Sbjct: 913 SRCFTKKCH 921
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 RCFTRP 7
RCF RP
Sbjct: 105 RCFLRP 110
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 RCFTRP 7
RCF RP
Sbjct: 105 RCFLRP 110
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 RCFTRP 7
RCF RP
Sbjct: 105 RCFLRP 110
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 RCFTRP 7
RCF RP
Sbjct: 105 RCFLRP 110
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 1 GRCFTRP 7
G C++RP
Sbjct: 579 GTCYSRP 585
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 3 CFTRPAH 9
C T P H
Sbjct: 1101 CITYPGH 1107
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 GRCFTRPAH 9
G+C +P H
Sbjct: 2072 GQCAPQPTH 2080
>sp|VE2_HPV10|REGULATORY protein E2|Human papillomavirus type 10
Query: 3 CFTRPAH 9
C TR AH
Sbjct: 279 CDTRSAH 285
105|Sequence|521|530|RPAHLIRHRM
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 PAHLIRHRM 10
P HL HRM
Sbjct: 310 PGHLTGHRM 318
>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)
Query: 2 PAHLIRHRM 10
P H+ HRM
Sbjct: 194 PGHITGHRM 202
>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)
Query: 2 PAHLIRHRM 10
P H+ HRM
Sbjct: 182 PGHITGHRM 190
>sp|POLG_HCVE0|GENOME polyprotein|Hepatitis C virus (isolate EC10)
Query: 2 PAHLIRHRM 10
P H+ HRM
Sbjct: 11 PGHITGHRM 19
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 PAHLIRHRM 10
P HL HRM
Sbjct: 310 PGHLSGHRM 318
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 2 PAHLIRHRM 10
P H+ HRM
Sbjct: 194 PGHITGHRM 202
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 PAHLIRHRM 10
P H+ HRM
Sbjct: 310 PGHITGHRM 318
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PAHLIRHRM 10
P H+ HRM
Sbjct: 310 PGHITGHRM 318
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 PAHLIRHRM 10
P H+ HRM
Sbjct: 310 PGHITGHRM 318
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 PAHLIRHRM 10
P H+ HRM
Sbjct: 310 PGHVTGHRM 318
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 2 PAHLIRHRM 10
P H+ HRM
Sbjct: 310 PGHITGHRM 318
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PAHLIRHRM 10
P H+ HRM
Sbjct: 310 PGHVTGHRM 318
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 2 PAHLIRHRM 10
P HL HRM
Sbjct: 310 PGHLSGHRM 318
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PAHLIRHRM 10
P H+ HRM
Sbjct: 310 PGHVTGHRM 318
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 PAHLIRHRM 10
P H+ HRM
Sbjct: 310 PGHVTGHRM 318
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 PAHLIRHRM 10
P H+ HRM
Sbjct: 310 PGHVTGHRM 318
>sp|VE6_HPV25|PROTEIN E6|Human papillomavirus 25
Query: 1 RPAHLIR 7
RP HL+R
Sbjct: 138 RPFHLVR 144
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PAHLIRHRM 10
P H+ HRM
Sbjct: 310 PGHVSGHRM 318
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PAHLIRHRM 10
P H+ HRM
Sbjct: 310 PGHVSGHRM 318
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PAHLIRHRM 10
P H+ HRM
Sbjct: 310 PGHVSGHRM 318
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 PAHLIRHRM 10
P H+ HRM
Sbjct: 311 PGHVSGHRM 319
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PAHLIRHRM 10
P H+ HRM
Sbjct: 310 PGHVSGHRM 318
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PAHLIRHRM 10
P H+ HRM
Sbjct: 310 PGHVSGHRM 318
>sp|PG165_VACCC|PROTEIN OPG165|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 HLIRHRM 10
HLI HR+
Sbjct: 63 HLIPHRL 69
>sp|PG165_MONPV|PROTEIN OPG165|Monkeypox virus (MPXV)
Query: 4 HLIRHRM 10
HLI HR+
Sbjct: 68 HLIPHRL 74
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 2 PAHLIRHRM 10
P H+ HRM
Sbjct: 310 PGHVSGHRM 318
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 2 PAHLIRHRM 10
P H+ HRM
Sbjct: 310 PGHVSGHRM 318
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 PAHLIRH 8
PA++I+H
Sbjct: 33 PAYVIKH 39
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 AHLIRH 8
AHL++H
Sbjct: 1382 AHLVKH 1387
>sp|VE2_HPV10|REGULATORY protein E2|Human papillomavirus type 10
Query: 1 RPAHLIRH 8
R AH +RH
Sbjct: 282 RSAHPVRH 289
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 AHLIRH 8
AHL++H
Sbjct: 1382 AHLVKH 1387
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 AHLIRH 8
AHL++H
Sbjct: 1382 AHLVKH 1387
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 3 AHLIRHR 9
AH+++H+
Sbjct: 53 AHVVKHK 59
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 3 AHLIRHR 9
AH+++H+
Sbjct: 53 AHVVKHK 59
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 3 AHLIRHR 9
AH+++H+
Sbjct: 53 AHVVKHK 59
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 AHLIRHR 9
AH+++H+
Sbjct: 53 AHVVKHK 59
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 2 PAHLIR 7
P HLIR
Sbjct: 238 PVHLIR 243
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 3 AHLIRHR 9
AH+++H+
Sbjct: 53 AHVVKHK 59
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 AHLIRHR 9
AH+++H+
Sbjct: 53 AHVVKHK 59
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 HLIRH 8
HL+RH
Sbjct: 629 HLVRH 633
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 HLIRH 8
HL+RH
Sbjct: 629 HLVRH 633
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 HLIRH 8
HL+RH
Sbjct: 629 HLVRH 633
>sp|A37_VAR67|PROTEIN A37 homolog|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 HLIRHRM 10
HLI HR+
Sbjct: 23 HLIPHRL 29
106|Sequence|526|535|IRHRMLHTGE
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 2 RHRMLH 7
+HR+LH
Sbjct: 449 KHRLLH 454
>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 IRHRMLHT 8
I HR+LH+
Sbjct: 58 IEHRLLHS 65
>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41
Query: 2 RHRMLHTGE 10
RH M H G+
Sbjct: 285 RHIMQHAGK 293
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 1 IRHRMLHTGE 10
I+HR TG+
Sbjct: 419 IKHRSERTGD 428
107|Sequence|531|540|LHTGERPFPC
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 3 TGERPFPC 10
TGE P PC
Sbjct: 1459 TGEAPLPC 1466
Query: 1 LHTGERPFPC 10
+H GE P C
Sbjct: 176 VHDGEHPASC 185
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 3 TGERPFPC 10
TGE P PC
Sbjct: 1457 TGEAPLPC 1464
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 3 TGERPFPC 10
TG+ P PC
Sbjct: 1459 TGDAPLPC 1466
Query: 1 LHTGERPFPC 10
+H GE P C
Sbjct: 176 VHDGEHPASC 185
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 3 TGERPFPC 10
TG+ P PC
Sbjct: 1460 TGDAPLPC 1467
Query: 1 LHTGERPFPC 10
+H GE P C
Sbjct: 176 VHDGEHPASC 185
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 3 TGERPFPC 10
TG+ P PC
Sbjct: 1459 TGDAPLPC 1466
Query: 1 LHTGERPFPC 10
+H GE P C
Sbjct: 176 VHDGEHPASC 185
>sp|VIF_HV1JR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 LHTGER 6
LHTGER
Sbjct: 72 LHTGER 77
>sp|VIF_HV1OY|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 LHTGER 6
LHTGER
Sbjct: 72 LHTGER 77
>sp|VIF_HV1LW|TRUNCATED virion infectivity factor|Human immunodeficiency virus type 1
Query: 1 LHTGER 6
LHTGER
Sbjct: 72 LHTGER 77
>sp|PG083_VARV|CORE protease OPG082|Variola virus
Query: 1 LHTGERP 7
+HTGE P
Sbjct: 148 IHTGENP 154
>sp|PG083_VAR67|CORE protease OPG082|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 LHTGERP 7
+HTGE P
Sbjct: 148 IHTGENP 154
>sp|PG083_VACCC|CORE protease OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LHTGERP 7
+HTGE P
Sbjct: 148 IHTGENP 154
>sp|VIF_HV197|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 LHTGER 6
LHTGER
Sbjct: 72 LHTGER 77
>sp|VIF_HV1N5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 LHTGER 6
LHTGER
Sbjct: 72 LHTGER 77
>sp|VIF_HV1Z6|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 LHTGER 6
LHTGER
Sbjct: 72 LHTGER 77
>sp|VIF_HV1V9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 LHTGER 6
LHTGER
Sbjct: 72 LHTGER 77
>sp|VIF_HV1M2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 LHTGER 6
LHTGER
Sbjct: 73 LHTGER 78
>sp|VIF_HV1Z2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 LHTGER 6
LHTGER
Sbjct: 72 LHTGER 77
>sp|VIF_HV1B9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 LHTGER 6
LHTGER
Sbjct: 72 LHTGER 77
>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 LHTGER 6
LHTGER
Sbjct: 72 LHTGER 77
>sp|VIF_HV1MP|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 LHTGER 6
LHTGER
Sbjct: 73 LHTGER 78
>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 LHTGER 6
LHTGER
Sbjct: 72 LHTGER 77
>sp|VIF_HV1EL|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 LHTGER 6
LHTGER
Sbjct: 72 LHTGER 77
>sp|VIF_HV1NA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 LHTGER 6
LHTGER
Sbjct: 72 LHTGER 77
>sp|VIF_HV1H2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 LHTGER 6
LHTGER
Sbjct: 72 LHTGER 77
>sp|VIF_HV1BR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 LHTGER 6
LHTGER
Sbjct: 72 LHTGER 77
>sp|VIF_HV1B1|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 LHTGER 6
LHTGER
Sbjct: 72 LHTGER 77
>sp|VIF_HV112|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 LHTGER 6
LHTGER
Sbjct: 72 LHTGER 77
>sp|VIF_HV1B5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 LHTGER 6
LHTGER
Sbjct: 72 LHTGER 77
>sp|VIF_HV1MN|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 LHTGER 6
LHTGER
Sbjct: 72 LHTGER 77
>sp|VIF_HV1RH|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 LHTGER 6
LHTGER
Sbjct: 72 LHTGER 77
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 LHTGERPF 8
L TG RP+
Sbjct: 54 LKTGNRPY 61
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 LHTGERPF 8
L TG RP+
Sbjct: 54 LKTGNRPY 61
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 LHTGERPF 8
L TG RP+
Sbjct: 54 LKTGNRPY 61
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 LHTGERPF 8
L TG RP+
Sbjct: 54 LKTGNRPY 61
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 LHTGERPF 8
L TG RP+
Sbjct: 54 LKTGNRPY 61
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 LHTGERPF 8
L TG RP+
Sbjct: 54 LKTGNRPY 61
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 LHTGERPF 8
L TG RP+
Sbjct: 54 LKTGNRPY 61
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 4 GERPFP 9
G RPFP
Sbjct: 10 GRRPFP 15
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 4 GERPFP 9
G RPFP
Sbjct: 10 GRRPFP 15
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 5 ERPFPC 10
+RPF C
Sbjct: 591 QRPFQC 596
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 1 LHTGERPFPC 10
+H GE P C
Sbjct: 176 VHDGEHPASC 185
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 LHTGERPF 8
L TG RP+
Sbjct: 54 LTTGNRPY 61
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 4 GERPFP 9
G RPFP
Sbjct: 10 GRRPFP 15
>sp|VIF_HV1ND|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 LHTGER 6
LHTGE+
Sbjct: 72 LHTGEK 77
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 3 TGERPFPC 10
+GE FPC
Sbjct: 306 SGEGGFPC 313
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 3 TGERPFPC 10
+GE FPC
Sbjct: 306 SGEGGFPC 313
>sp|PG154_VAR67|PROTEIN OPG154|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LHTGERPF 8
+ TG RP+
Sbjct: 102 VQTGRRPY 109
>sp|PG154_VACCC|PROTEIN OPG154|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LHTGERPF 8
+ TG RP+
Sbjct: 102 VQTGRRPY 109
>sp|ORF10_HHV8P|PROTEIN ORF10|Human herpesvirus 8 type P
Query: 1 LHTGERPFP 9
LH+ E P P
Sbjct: 153 LHSAEAPLP 161
>sp|VIF_HV1U4|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 LHTGER 6
LHTGE+
Sbjct: 72 LHTGEK 77
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 4 GERPFPC 10
G RP PC
Sbjct: 651 GARPAPC 657
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 HTGERP 7
HT ERP
Sbjct: 2204 HTEERP 2209
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 5 ERPFP 9
+RPFP
Sbjct: 7 QRPFP 11
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 HTGERP 7
HT ERP
Sbjct: 2161 HTEERP 2166
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 HTGERP 7
HT ERP
Sbjct: 2204 HTEERP 2209
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 HTGERP 7
HT ERP
Sbjct: 2205 HTEERP 2210
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 HTGERP 7
HT ERP
Sbjct: 2168 HTEERP 2173
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 HTGERP 7
HT ERP
Sbjct: 2165 HTEERP 2170
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 HTGERP 7
HT ERP
Sbjct: 2102 HTEERP 2107
>sp|VIF_HV1SE|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 LHTGER 6
LHTGE+
Sbjct: 72 LHTGEK 77
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 HTGERP 7
HT ERP
Sbjct: 2188 HTEERP 2193
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 HTGERP 7
HT ERP
Sbjct: 2193 HTEERP 2198
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 HTGERP 7
HT ERP
Sbjct: 2128 HTEERP 2133
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 HTGERP 7
HT ERP
Sbjct: 2120 HTEERP 2125
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 HTGERP 7
HT ERP
Sbjct: 2171 HTEERP 2176
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 2 HTGERP 7
HT ERP
Sbjct: 2165 HTEERP 2170
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 HTGERP 7
HT ERP
Sbjct: 2165 HTEERP 2170
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 HTGERP 7
HT ERP
Sbjct: 2158 HTEERP 2163
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 2 HTGERP 7
HT ERP
Sbjct: 840 HTEERP 845
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 HTGERP 7
HT ERP
Sbjct: 2158 HTEERP 2163
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 HTGERP 7
HT ERP
Sbjct: 2187 HTEERP 2192
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 HTGERP 7
HT ERP
Sbjct: 2179 HTEERP 2184
>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28
Query: 1 LHTGERPFPC 10
LH G+R C
Sbjct: 314 LHKGKRKLYC 323
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 HTGERP 7
HT ERP
Sbjct: 2187 HTEERP 2192
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 HTGERP 7
HT ERP
Sbjct: 2206 HTEERP 2211
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 LHTGERPFP 9
LH G+R P
Sbjct: 1539 LHAGKRMTP 1547
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 HTGERP 7
HT ERP
Sbjct: 2204 HTEERP 2209
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 2 HTGERPFPC 10
H G RP C
Sbjct: 309 HNGTRPLLC 317
>sp|VE6_HPV30|PROTEIN E6|Human papillomavirus 30
Query: 2 HTGERP 7
+TGERP
Sbjct: 7 NTGERP 12
>sp|VFUS_VACC6|14 kDa fusion protein|Vaccinia virus (strain WR 65-16)
Query: 1 LHTGERPF 8
+ TG RP+
Sbjct: 128 VQTGRRPY 135
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 6 RPFPC 10
RP PC
Sbjct: 1680 RPVPC 1684
>sp|VE8E2_HPV28|PROTEIN E8^E2C|Human papillomavirus 28
Query: 1 LHTGERPFPC 10
LH G+R C
Sbjct: 114 LHKGKRKLYC 123
>sp|UL61_HCMVA|UNCHARACTERIZED protein UL61|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LHTGERPFPC 10
+ T RP PC
Sbjct: 363 VRTAARPEPC 372
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 HTGERPFP 9
HT + P P
Sbjct: 330 HTAQGPIP 337
108|Sequence|536|545|RPFPCTECEK
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 RPFPCTEC 8
RP CT+C
Sbjct: 5017 RPMLCTKC 5024
>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 RPFPC 5
+PFPC
Sbjct: 262 KPFPC 266
>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 RPFPC 5
+PFPC
Sbjct: 262 KPFPC 266
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 PCTECEK 10
PC+ CEK
Sbjct: 496 PCSLCEK 502
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 4 PCTECEK 10
PC+ CEK
Sbjct: 496 PCSLCEK 502
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 2 PFPC 5
PFPC
Sbjct: 214 PFPC 217
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 4 PCTECEK 10
PCT C K
Sbjct: 1352 PCTGCPK 1358
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 PCTEC 8
PC EC
Sbjct: 1149 PCPEC 1153
>sp|US30_HCMVA|UNCHARACTERIZED protein HHRF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RPFPCT 6
RPFP T
Sbjct: 313 RPFPST 318
>sp|US30_HCMVM|UNCHARACTERIZED protein US30|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RPFPCT 6
RPFP T
Sbjct: 313 RPFPST 318
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 PCTEC 8
PC EC
Sbjct: 1149 PCPEC 1153
>sp|V_PIV5|NON-STRUCTURAL protein V|Parainfluenza virus 5 (strain W3)
Query: 2 PFPCTECEK 10
P C+ECE+
Sbjct: 212 PVTCSECER 220
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 1 RPFPCTEC 8
+PFP T C
Sbjct: 265 QPFPWTHC 272
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 RPFPCT 6
RP PC+
Sbjct: 1680 RPVPCS 1685
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 RPFPCTECE 9
+P PC E E
Sbjct: 766 KPKPCPEPE 774
>sp|PG147_VARV|VIRION membrane protein OPG147|Variola virus
Query: 2 PFPCTE 7
P PC+E
Sbjct: 72 PIPCSE 77
>sp|PG147_VAR67|VIRION membrane protein OPG147|Variola virus (isolate
Query: 2 PFPCTE 7
P PC+E
Sbjct: 72 PIPCSE 77
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 PFPCTE 7
P+PC E
Sbjct: 1969 PWPCME 1974
>sp|YVBC_VACCC|UNCHARACTERIZED 10.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 FPCT 6
FPCT
Sbjct: 87 FPCT 90
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 2 PFPCTECEK 10
PFP T C +
Sbjct: 272 PFPWTHCYR 280
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 RPFPCTEC 8
R F C +C
Sbjct: 4559 RHFDCNDC 4566
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 2 PFPCTECEK 10
PFP T C +
Sbjct: 270 PFPWTHCYR 278
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 PFPCTECE 9
P P T+CE
Sbjct: 1091 PGPSTQCE 1098
>sp|US08_HCMVM|MEMBRANE glycoprotein US8|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PCTECE 9
PCT+C+
Sbjct: 142 PCTKCK 147
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 PFPCTE 7
P+PC E
Sbjct: 1965 PWPCME 1970
>sp|HEMA_I40A0|HEMAGGLUTININ A virus (strain A/Hickox/1940
Query: 2 PFPCTECEK 10
PF EC K
Sbjct: 314 PFTIGECPK 322
>sp|US09_HCMVM|MEMBRANE glycoprotein US9|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 FPCTECEK 10
+PC+ C +
Sbjct: 152 YPCSACNR 159
>sp|US09_HCMVA|UNIQUE short US9 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 FPCTECEK 10
+PC+ C +
Sbjct: 152 YPCSACNR 159
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 FPCTEC 8
F CT C
Sbjct: 411 FACTTC 416
>sp|US08_HCMVA|UNIQUE short US8 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PCTECE 9
PCT+C+
Sbjct: 142 PCTKCK 147
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 5 CTEC 8
CTEC
Sbjct: 1153 CTEC 1156
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 2 PFPCTECEK 10
P CT C K
Sbjct: 495 PVLCTTCRK 503
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 3 FPCTEC 8
PC EC
Sbjct: 180 LPCLEC 185
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 FPCTEC 8
F CT C
Sbjct: 411 FACTTC 416
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 RPFPCTECE 9
+P P +C+
Sbjct: 2360 KPLPADDCQ 2368
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 3 FPCTEC 8
FP +EC
Sbjct: 168 FPTSEC 173
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 5 CTEC 8
CTEC
Sbjct: 920 CTEC 923
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 3 FPCT 6
FPCT
Sbjct: 1582 FPCT 1585
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 4 PCTECE 9
PC +CE
Sbjct: 291 PCMDCE 296
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 PCTECEK 10
PC C+K
Sbjct: 281 PCALCKK 287
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 4 PCTECEK 10
PC C+K
Sbjct: 281 PCALCKK 287
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 PCTECEK 10
PC C+K
Sbjct: 281 PCALCKK 287
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 4 PCTECEK 10
PC C+K
Sbjct: 281 PCALCKK 287
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 3 FPCT 6
FPCT
Sbjct: 1581 FPCT 1584
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 CTECEK 10
CT+C++
Sbjct: 1210 CTQCQQ 1215
109|Sequence|541|550|TECEKRFTER
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 2 ECEKRFTE 9
ECEK FT+
Sbjct: 925 ECEKTFTK 932
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 2 ECEKRFTE 9
ECEK FT+
Sbjct: 925 ECEKTFTK 932
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 2 ECEKRFTE 9
ECEK FT+
Sbjct: 925 ECEKTFTK 932
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 2 ECEKRFTE 9
ECEK FT+
Sbjct: 925 ECEKTFTK 932
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 2 ECEKRFTE 9
ECEK FT+
Sbjct: 930 ECEKTFTK 937
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 2 ECEKRFTE 9
ECEK FT+
Sbjct: 930 ECEKTFTK 937
>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943
Query: 2 ECEKRFTER 10
ECE +ER
Sbjct: 83 ECESLLSER 91
>sp|VC02_VACCT|KELCH repeat protein C2|Vaccinia virus (strain Tian Tan)
Query: 1 TECEKRFTE 9
+ CEK+F +
Sbjct: 504 SNCEKQFLQ 512
>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TECEKRFTE 9
+ CEK+F +
Sbjct: 504 SNCEKQFLQ 512
>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /
Query: 1 TECEKRFTE 9
+ CEK+F +
Sbjct: 504 SNCEKQFLQ 512
>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945
Query: 2 ECEKRFTER 10
ECE +ER
Sbjct: 83 ECESLLSER 91
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 3 CEKRFTER 10
C++ FT+R
Sbjct: 314 CKQGFTDR 321
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 CEKRFTER 10
C++ FT+R
Sbjct: 386 CKQGFTDR 393
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 CEKRFTER 10
C++ FT+R
Sbjct: 386 CKQGFTDR 393
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 CEKRFTER 10
C++ FT+R
Sbjct: 386 CKQGFTDR 393
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 CEKRFTER 10
C++ FT+R
Sbjct: 386 CKQGFTDR 393
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 CEKRFTER 10
C++ FT+R
Sbjct: 386 CKQGFTDR 393
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 CEKRFTER 10
C++ FT+R
Sbjct: 386 CKQGFTDR 393
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 CEKRFTER 10
C++ FT+R
Sbjct: 386 CKQGFTDR 393
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 CEKRFTER 10
C++ FT+R
Sbjct: 386 CKQGFTDR 393
110|Sequence|546|555|RFTERSKLID
>sp|VGF_VACCT|PRO-VACCINIA growth factor|Vaccinia virus (strain Tian Tan)
Query: 1 RFTERSKL 8
RFT R+KL
Sbjct: 125 RFTRRTKL 132
>sp|VGF_VACCP|PRO-VACCINIA growth factor|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 RFTERSKL 8
RFT R+KL
Sbjct: 125 RFTRRTKL 132
>sp|VGF_VACCA|PRO-VACCINIA growth factor|Vaccinia virus (strain Ankara) (VACV)
Query: 1 RFTERSKL 8
RFT R+KL
Sbjct: 125 RFTRRTKL 132
>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 RFTERSKLID 10
R TER +++D
Sbjct: 388 RITERQEIVD 397
>sp|VL2_HPV04|MINOR capsid protein L2|Human papillomavirus 4
Query: 2 FTERSKLID 10
FTE +L+D
Sbjct: 416 FTEEQQLLD 424
>sp|NSP3_ROTGA|NON-STRUCTURAL protein 3|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 2 FTERSKLID 10
TER KLI+
Sbjct: 169 MTERMKLIE 177
>sp|PHOSP_PI3H4|PHOSPHOPROTEIN parainfluenza 3 virus (strain
Query: 1 RFTERS 6
RFTER+
Sbjct: 361 RFTERA 366
111|Sequence|551|560|SKLIDHYRTH
>sp|EAD_EBVG|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 1 SKLIDHYRTH 10
SK DH +TH
Sbjct: 18 SKCYDHAQTH 27
>sp|EAD_EBVB9|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 1 SKLIDHYRTH 10
SK DH +TH
Sbjct: 18 SKCYDHAQTH 27
>sp|EAD_EBVA8|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 1 SKLIDHYRTH 10
SK DH +TH
Sbjct: 18 SKCYDHAQTH 27
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 3 LIDHYRTH 10
L +HYR H
Sbjct: 252 LPEHYRKH 259
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 LIDHYRT 9
L DHY+T
Sbjct: 2490 LDDHYKT 2496
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 LIDHYRT 9
L DHY+T
Sbjct: 2490 LDDHYKT 2496
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 KLIDHYRT 9
+L DHY T
Sbjct: 623 RLYDHYAT 630
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 6 HYRTH 10
HYR H
Sbjct: 499 HYRAH 503
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 6 HYRTH 10
HYR H
Sbjct: 499 HYRAH 503
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 6 HYRTH 10
HYR H
Sbjct: 499 HYRAH 503
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 6 HYRTH 10
HYR H
Sbjct: 499 HYRAH 503
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 6 HYRTH 10
HYR H
Sbjct: 499 HYRAH 503
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 1 SKLIDHYRTH 10
SKL D R H
Sbjct: 434 SKLPDEVRAH 443
>sp|PB1F2_I03A1|PROTEIN PB1-F2|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 SKLIDHY 7
++L+DHY
Sbjct: 36 TRLMDHY 42
>sp|PB1F2_I03A0|PROTEIN PB1-F2|Influenza A virus (strain A/Hong
Query: 1 SKLIDHY 7
++L+DHY
Sbjct: 36 TRLMDHY 42
>sp|PB1F2_I02A6|PROTEIN PB1-F2|Influenza A virus (strain A/Chicken/Hong
Query: 1 SKLIDHY 7
++L+DHY
Sbjct: 36 TRLMDHY 42
>sp|PB1F2_I02A5|PROTEIN PB1-F2|Influenza A virus (strain A/Chicken/Hong
Query: 1 SKLIDHY 7
++L+DHY
Sbjct: 36 TRLMDHY 42
>sp|PB1F2_I01A1|PROTEIN PB1-F2|Influenza A virus (strain A/Chicken/Hong
Query: 1 SKLIDHY 7
++L+DHY
Sbjct: 36 TRLMDHY 42
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LIDHYR 8
L DHYR
Sbjct: 2479 LDDHYR 2484
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 LIDHYR 8
L DHYR
Sbjct: 2483 LDDHYR 2488
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LIDHYR 8
L DHYR
Sbjct: 2479 LDDHYR 2484
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LIDHYR 8
L DHYR
Sbjct: 2479 LDDHYR 2484
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LIDHYR 8
L DHYR
Sbjct: 2479 LDDHYR 2484
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LIDHYR 8
L DHYR
Sbjct: 2479 LDDHYR 2484
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 LIDHYR 8
L DHYR
Sbjct: 2480 LDDHYR 2485
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 LIDHYR 8
L DHYR
Sbjct: 2480 LDDHYR 2485
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 LIDHYR 8
L DHYR
Sbjct: 2483 LDDHYR 2488
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LIDHYR 8
L DHYR
Sbjct: 2479 LDDHYR 2484
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LIDHYR 8
L DHYR
Sbjct: 2479 LDDHYR 2484
>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18
Query: 2 KLIDHY 7
K+IDHY
Sbjct: 18 KIIDHY 23
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 2 KLIDHYR 8
K++D YR
Sbjct: 920 KIVDQYR 926
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 KLIDHYRT 9
++ DHY T
Sbjct: 607 RIYDHYAT 614
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 KLIDHYR 8
K++D YR
Sbjct: 923 KIVDQYR 929
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 1 SKLIDHYRT 9
++LI HY T
Sbjct: 762 TQLITHYET 770
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SKLIDHYRT 9
++LI HY T
Sbjct: 762 TQLITHYET 770
>sp|VE2_HPV35|REGULATORY protein E2|Human papillomavirus 35
Query: 2 KLIDHYRT 9
K+++HY T
Sbjct: 15 KILEHYET 22
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 4 IDHYRTH 10
IDH TH
Sbjct: 704 IDHPETH 710
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 SKLIDH 6
+KLIDH
Sbjct: 3861 NKLIDH 3866
>sp|SCAF_HHV8P|CAPSID scaffolding protein|Human herpesvirus 8 type P
Query: 6 HYRTH 10
HYR H
Sbjct: 403 HYRPH 407
>sp|PB1F2_I96A0|PROTEIN PB1-F2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 KLIDHY 7
+L+DHY
Sbjct: 37 RLMDHY 42
>sp|PB1F2_I80A4|PROTEIN PB1-F2|Influenza A virus (strain A/Memphis/4/1980
Query: 1 SKLIDHY 7
++L+DHY
Sbjct: 36 TRLMDHY 42
>sp|PB1F2_I68A4|PROTEIN PB1-F2|Influenza A virus (strain A/Hong
Query: 2 KLIDHY 7
+L+DHY
Sbjct: 37 RLMDHY 42
>sp|PB1F2_I78A8|PROTEIN PB1-F2|Influenza A virus (strain A/Memphis/18/1978
Query: 1 SKLIDHY 7
++L+DHY
Sbjct: 36 TRLMDHY 42
>sp|PB1F2_I78A7|PROTEIN PB1-F2|Influenza A virus (strain A/Memphis/2/1978
Query: 1 SKLIDHY 7
++L+DHY
Sbjct: 36 TRLMDHY 42
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 LIDHYRT 9
L DHY T
Sbjct: 2488 LDDHYNT 2494
>sp|PB1F2_I83A8|PROTEIN PB1-F2|Influenza A virus (strain A/Hong
Query: 1 SKLIDHY 7
++L+DHY
Sbjct: 36 TRLMDHY 42
112|Sequence|556|565|HYRTHTGVRP
>sp|VE7_HPV54|PROTEIN E7|Human papillomavirus type 54
Query: 2 YRTHTGVR 9
Y THTG+R
Sbjct: 66 YSTHTGIR 73
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 YRTHTGVRP 10
Y T TGV P
Sbjct: 526 YSTETGVSP 534
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HYRTHTGVR 9
+YR+H GV+
Sbjct: 371 YYRSHGGVQ 379
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HYRTHTGVR 9
+YR+H GV+
Sbjct: 371 YYRSHGGVQ 379
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 HYRTHTGV 8
HYR +GV
Sbjct: 2987 HYRALSGV 2994
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 HYRTHTGV 8
HYR +GV
Sbjct: 2987 HYRALSGV 2994
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 4 THTGVR 9
T+TGVR
Sbjct: 134 TYTGVR 139
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 4 THTGVR 9
T+TGVR
Sbjct: 134 TYTGVR 139
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 4 THTGVR 9
T+TGVR
Sbjct: 134 TYTGVR 139
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 4 THTGVR 9
T+TGVR
Sbjct: 134 TYTGVR 139
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 4 THTGVR 9
T+TGVR
Sbjct: 134 TYTGVR 139
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 4 THTGVR 9
T+TGVR
Sbjct: 134 TYTGVR 139
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 4 THTGVR 9
T+TGVR
Sbjct: 134 TYTGVR 139
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 4 THTGVR 9
T+TGVR
Sbjct: 134 TYTGVR 139
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 4 THTGVR 9
T+TGVR
Sbjct: 134 TYTGVR 139
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 4 THTGVR 9
T+TGVR
Sbjct: 134 TYTGVR 139
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 YRTHTGVRP 10
Y H GV+P
Sbjct: 475 YDIHFGVQP 483
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 YRTHTGVRP 10
Y H GV+P
Sbjct: 475 YDIHFGVQP 483
113|Sequence|561|570|TGVRPFTCTV
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 GVRPFTCT 9
G RPFT T
Sbjct: 1136 GARPFTVT 1143
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 1 TGVRPFTCT 9
G RP CT
Sbjct: 310 NGTRPLLCT 318
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 5 PFTCTV 10
PFTC +
Sbjct: 311 PFTCIL 316
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 GVRPFTCTV 10
++P CTV
Sbjct: 1100 AIQPIKCTV 1108
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 GVRPFTCTV 10
++P CTV
Sbjct: 1100 AIQPIRCTV 1108
>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)
Query: 5 PFTCT 9
PF+CT
Sbjct: 267 PFSCT 271
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 1 TGVRPFTCT 9
TGV P T T
Sbjct: 42 TGVIPLTTT 50
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 1 TGVRPFTCT 9
TGV P T T
Sbjct: 42 TGVIPLTTT 50
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 VRPFTCTV 10
+ PF CT+
Sbjct: 1056 IAPFGCTI 1063
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 VRPFTCTV 10
+ PF CT+
Sbjct: 1056 IAPFGCTI 1063
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 1 TGVRPFTCT 9
TGV P T T
Sbjct: 35 TGVIPLTTT 43
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 1 TGVRPFTCT 9
TGV P T T
Sbjct: 42 TGVIPLTTT 50
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 1 TGVRPFTCT 9
TGV P T T
Sbjct: 35 TGVIPLTTT 43
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 1 TGVRPFTCT 9
TGV P T T
Sbjct: 42 TGVIPLTTT 50
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 TGVRPFTCT 9
TGV P T T
Sbjct: 35 TGVIPLTTT 43
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 1 TGVRPFTCT 9
TGV P T T
Sbjct: 42 TGVIPLTTT 50
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 1 TGVRPFTCT 9
TGV P T T
Sbjct: 35 TGVIPLTTT 43
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 1 TGVRPFTCT 9
TGV P T T
Sbjct: 35 TGVIPLTTT 43
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 1 TGVRPFTCT 9
TGV P T T
Sbjct: 42 TGVIPLTTT 50
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 1 TGVRPFTCT 9
TGV P T T
Sbjct: 32 TGVIPLTTT 40
114|Sequence|566|575|FTCTVCGKSF
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 TCTVCGKSF 10
TCT+ GK+F
Sbjct: 479 TCTIAGKAF 487
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 TCTVCGKSF 10
TCT+ GK+F
Sbjct: 479 TCTIAGKAF 487
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 1 FTCTVCGKS 9
TCT+C K+
Sbjct: 151 LTCTICYKA 159
>sp|VE7_HPV04|PROTEIN E7|Human papillomavirus 4
Query: 1 FTCTVCGKSF 10
F CT C +S
Sbjct: 86 FCCTACARSL 95
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 FTCTVCGKSF 10
F CT CG +
Sbjct: 411 FACTTCGHVY 420
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 FTCTVCGKSF 10
F CT CG +
Sbjct: 411 FACTTCGHVY 420
>sp|PG146_VAR67|PROTEIN OPG146|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 FTCTVCGKSF 10
CT CG S
Sbjct: 59 LACTACGSSL 68
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 TCTVCGKS 9
TC CGK+
Sbjct: 388 TCWNCGKA 395
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 TCTVCGKS 9
TC CGK+
Sbjct: 388 TCWNCGKA 395
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 TCTVCGK 8
TCT C +
Sbjct: 1421 TCTACAQ 1427
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 TCTVCGK 8
TCT C +
Sbjct: 1421 TCTACAQ 1427
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 TCTVCGK 8
TCT C +
Sbjct: 1421 TCTACAQ 1427
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain
Query: 2 TCTVC 6
TCT+C
Sbjct: 18 TCTIC 22
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 TCTVCGKSF 10
TCT GK++
Sbjct: 2218 TCTTHGKAY 2226
>sp|PG055_VACCP|PROTEIN OPG055|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 FTCTVCGKS 9
FT T+C K+
Sbjct: 141 FTATICLKN 149
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 FTCTVCGK 8
F C CGK
Sbjct: 389 FKCWNCGK 396
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 FTCTVCGK 8
F C CGK
Sbjct: 387 FKCWNCGK 394
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 FTCTVCGK 8
F C CGK
Sbjct: 389 FKCWNCGK 396
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 FTCTVCGK 8
F C CGK
Sbjct: 387 FKCWNCGK 394
>sp|PG055_MONPV|PROTEIN OPG055|Monkeypox virus (MPXV)
Query: 1 FTCTVCGKS 9
FT T+C K+
Sbjct: 144 FTATICLKN 152
>sp|PG055_VACCC|PROTEIN OPG055|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FTCTVCGKS 9
FT T+C K+
Sbjct: 144 FTATICLKN 152
>sp|VE7_HPV65|PROTEIN E7|Human papillomavirus 65
Query: 1 FTCTVCGKSF 10
F CT C ++
Sbjct: 85 FCCTTCARTL 94
>sp|PG055_VARV|PROTEIN OPG055|Variola virus
Query: 1 FTCTVCGKS 9
FT T+C K+
Sbjct: 144 FTATICLKN 152
>sp|PG055_VAR67|PROTEIN OPG055|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 FTCTVCGKS 9
FT T+C K+
Sbjct: 144 FTATICLKN 152
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 TCTVCGK 8
TC CGK
Sbjct: 389 TCWNCGK 395
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 TCTVCGK 8
TC CGK
Sbjct: 389 TCWNCGK 395
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 TCTVCGK 8
TC CGK
Sbjct: 389 TCWNCGK 395
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 TCTVCGK 8
TC CGK
Sbjct: 389 TCWNCGK 395
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 CTVCG 7
CTVCG
Sbjct: 4370 CTVCG 4374
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 CTVCG 7
CTVCG
Sbjct: 4347 CTVCG 4351
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 CTVCG 7
CTVCG
Sbjct: 4347 CTVCG 4351
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 CTVCG 7
CTVCG
Sbjct: 4370 CTVCG 4374
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 FTCTVC 6
+TC VC
Sbjct: 223 YTCIVC 228
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 TCTVCGK 8
TCT GK
Sbjct: 2212 TCTTAGK 2218
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 FTCTVC 6
+TC VC
Sbjct: 223 YTCIVC 228
>sp|GLYC_HRSV1|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 3 CTVCGKS 9
C++CG +
Sbjct: 173 CSICGNN 179
>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 FTCTVC 6
+TC VC
Sbjct: 223 YTCIVC 228
>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 FTCTVC 6
+TC VC
Sbjct: 223 YTCIVC 228
>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 FTCTVC 6
+TC VC
Sbjct: 223 YTCIVC 228
>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 FTCTVC 6
+TC VC
Sbjct: 223 YTCIVC 228
>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)
Query: 3 CTVC 6
CTVC
Sbjct: 170 CTVC 173
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 3 CTVCG 7
C VCG
Sbjct: 363 CRVCG 367
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 3 CTVCG 7
C VCG
Sbjct: 363 CRVCG 367
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 3 CTVCG 7
C VCG
Sbjct: 363 CRVCG 367
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 3 CTVCG 7
C VCG
Sbjct: 363 CRVCG 367
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 3 CTVCG 7
C VCG
Sbjct: 363 CRVCG 367
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 CTVCGK 8
C VC K
Sbjct: 10 CVVCSK 15
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 CTVCGK 8
C VC K
Sbjct: 10 CVVCSK 15
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 4 TVCGKSF 10
+CG+SF
Sbjct: 197 NICGQSF 203
>sp|GLYC_HRSV8|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 3 CTVCGKS 9
C++CG +
Sbjct: 173 CSICGNN 179
115|Sequence|571|580|CGKSFIRKDH
>sp|VP30_EBOZM|TRANSCRIPTIONAL activator VP30|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 CGKSFIRKDH 10
C SF +KDH
Sbjct: 81 CDSSFCKKDH 90
>sp|VP30_EBOZ5|TRANSCRIPTIONAL activator VP30|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 CGKSFIRKDH 10
C SF +KDH
Sbjct: 81 CDSSFCKKDH 90
>sp|VP30_EBOSU|TRANSCRIPTIONAL activator VP30|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 CGKSFIRKDH 10
C +F +KDH
Sbjct: 81 CDSNFCKKDH 90
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GKSFIRKDH 10
G F R+DH
Sbjct: 805 GSVFFRRDH 813
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GKSFIRKDH 10
G F R+DH
Sbjct: 805 GSVFFRRDH 813
>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)
Query: 1 CGKSFIR 7
CG +F+R
Sbjct: 406 CGHTFLR 412
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 SFIRKDH 10
SFI+++H
Sbjct: 441 SFIKRNH 447
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 SFIRKDH 10
SFI+++H
Sbjct: 441 SFIKRNH 447
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 CGKSFIRKDH 10
C +SF K+H
Sbjct: 636 CMRSFEYKNH 645
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 CGKSFIRKD 9
CGK+ KD
Sbjct: 1369 CGKAVTFKD 1377
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 CGKSFIRKD 9
CGK+ KD
Sbjct: 1373 CGKAVXFKD 1381
116|Sequence|576|585|IRKDHLRKHQ
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 KDHLRKHQ 10
KD LRKH+
Sbjct: 1849 KDELRKHE 1856
>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV
Query: 3 KDHLRKH 9
K+HLR+H
Sbjct: 162 KEHLRRH 168
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 1 IRKDHLRKHQ 10
I + HL HQ
Sbjct: 281 IARSHLPSHQ 290
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 IRKDHL 6
I KDHL
Sbjct: 276 IEKDHL 281
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 4 DHLRKH 9
DH+++H
Sbjct: 496 DHIQRH 501
117|Sequence|581|590|LRKHQRNHAA
>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 LRKHQRN 7
+ KHQRN
Sbjct: 174 MHKHQRN 180
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 RKHQRNH 8
++HQR+H
Sbjct: 498 QRHQRHH 504
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 1 LRKHQRNH 8
+ HQR+H
Sbjct: 110 MNAHQRHH 117
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 LRKHQRNHA 9
+RK+QR A
Sbjct: 882 VRKYQRTEA 890
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 LRKHQRNHA 9
+RK+QR A
Sbjct: 883 VRKYQRTEA 891
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 1 LRKHQRNHA 9
+RK+QR A
Sbjct: 882 VRKYQRTEA 890
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 LRKHQRNHA 9
+RK+QR A
Sbjct: 882 VRKYQRTEA 890
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 LRKHQRNHA 9
+RK+QR A
Sbjct: 882 VRKYQRTEA 890
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 1 LRKHQRNHA 9
+RK+QR A
Sbjct: 882 VRKYQRTEA 890
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 LRKHQRNHA 9
+RK+QR A
Sbjct: 883 VRKYQRTEA 891
>sp|UL38_HCMVA|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LRKHQRNHA 9
+R H R HA
Sbjct: 160 VRSHVRQHA 168
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 1 LRKHQRN 7
+RKH+R+
Sbjct: 1129 IRKHKRS 1135
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 LRKHQRNHA 9
+RK+QR A
Sbjct: 883 VRKYQRTEA 891
>sp|UL38_HCMVM|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LRKHQRNHA 9
+R H R HA
Sbjct: 160 VRSHVRQHA 168
>sp|NSP6_ROTHD|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/United
Query: 1 LRKHQRNH 8
L HQRNH
Sbjct: 71 LWIHQRNH 78
>sp|NSP6_ROTHB|NON-STRUCTURAL protein 6|Rotavirus A (strain
Query: 1 LRKHQRNH 8
L HQRNH
Sbjct: 71 LWIHQRNH 78
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 4 HQRNHAA 10
HQ +HAA
Sbjct: 8 HQTHHAA 14
>sp|UL144_HCMVO|MEMBRANE glycoprotein UL144|Human cytomegalovirus (strain Toledo) (HHV-5)
Query: 2 RKHQRNHAA 10
++ Q+NH A
Sbjct: 112 KQRQQNHTA 120
>sp|UL144_HCMVM|MEMBRANE glycoprotein UL144|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RKHQRNHAA 10
++ Q+NH A
Sbjct: 112 KQRQQNHTA 120
118|Sequence|586|595|RNHAAGAKTP
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 HAAGAKT 9
H AGAKT
Sbjct: 1083 HGAGAKT 1089
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 RNHAAGAKT 9
RN AA A+T
Sbjct: 1079 RNRAASART 1087
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 HAAGAKT 9
H AGAKT
Sbjct: 1084 HGAGAKT 1090
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 1 RNHAAGAKTP 10
RNH TP
Sbjct: 304 RNHCGSQATP 313
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 RNHAAGAK 8
R HA+GA+
Sbjct: 829 RTHASGAQ 836
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 HAAGAKT 9
H AG+KT
Sbjct: 1088 HGAGSKT 1094
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 HAAGAKT 9
H AG+KT
Sbjct: 1083 HGAGSKT 1089
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 HAAGAKT 9
H AG+KT
Sbjct: 1083 HGAGSKT 1089
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 HAAGAKT 9
H AG+KT
Sbjct: 1083 HGAGSKT 1089
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 2 NHAAG 6
NHAAG
Sbjct: 217 NHAAG 221
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 HAAGAKT 9
H AG+KT
Sbjct: 1083 HGAGSKT 1089
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 HAAGAKT 9
H AG+KT
Sbjct: 1083 HGAGSKT 1089
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 HAAGAKT 9
H AG+KT
Sbjct: 1083 HGAGSKT 1089
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 HAAGAKT 9
H AG+KT
Sbjct: 1083 HGAGSKT 1089
119|Sequence|591|600|GAKTPARGQP
>sp|RUVV_VARV|RESOLVASE OPG149|Variola virus
Query: 1 GAKTPAR 7
GAK PAR
Sbjct: 32 GAKNPAR 38
>sp|RUVV_VAR67|RESOLVASE OPG149|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 GAKTPAR 7
GAK PAR
Sbjct: 32 GAKNPAR 38
>sp|RUVV_VACCC|RESOLVASE OPG149|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GAKTPAR 7
GAK PAR
Sbjct: 21 GAKNPAR 27
>sp|RUVV_VACCA|HOLLIDAY junction resolvase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 GAKTPAR 7
GAK PAR
Sbjct: 32 GAKNPAR 38
>sp|RUVV_MONPV|RESOLVASE OPG149|Monkeypox virus (MPXV)
Query: 1 GAKTPAR 7
GAK PAR
Sbjct: 32 GAKNPAR 38
>sp|SF33K_ADE41|PROTEIN 33K|Human adenovirus F serotype 41
Query: 1 GAKTPARGQP 10
+K PAR QP
Sbjct: 76 SSKEPARSQP 85
>sp|VU55_HHV6Z|UNCHARACTERIZED protein U55|Human herpesvirus 6B (strain Z29)
Query: 5 PARGQP 10
PARG P
Sbjct: 471 PARGNP 476
>sp|VU55_HHV6U|UNCHARACTERIZED protein U55|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 PARGQP 10
PARG P
Sbjct: 411 PARGNP 416
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 TPARGQ 9
+PARGQ
Sbjct: 584 SPARGQ 589
>sp|DUT_ORFN2|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Orf virus (strain NZ2) (OV
Query: 2 AKTPARGQP 10
A PARG P
Sbjct: 18 ATIPARGSP 26
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 4 TPARGQP 10
TPA G+P
Sbjct: 213 TPACGEP 219
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 5 PARGQP 10
PARG+P
Sbjct: 754 PARGEP 759
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 5 PARGQP 10
PARG+P
Sbjct: 754 PARGEP 759
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 3 KTPARGQP 10
++P RGQP
Sbjct: 58 QSPPRGQP 65
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 4 TPARGQ 9
TP RGQ
Sbjct: 3259 TPCRGQ 3264
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GAKTPARGQP 10
GA+TP + P
Sbjct: 21 GAQTPEQPAP 30
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 GAKTPARGQP 10
GA+TP + P
Sbjct: 21 GAQTPEQPAP 30
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GAKTPARGQP 10
GA+TP + P
Sbjct: 21 GAQTPEQPAP 30
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 AKTPARGQP 10
A P RG P
Sbjct: 1813 ATPPGRGDP 1821
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 AKTPARGQP 10
A P RG P
Sbjct: 1813 ATPPGRGDP 1821
120|Sequence|596|605|ARGQPLPTPP
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 2 RGQPLPTP 9
RG+P P P
Sbjct: 454 RGEPCPLP 461
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 RGQPLPTPP 10
RG P PTPP
Sbjct: 738 RGAPTPTPP 746
>sp|X_HBVF1|PROTEIN X|Hepatitis B virus genotype F2
Query: 1 ARGQPLPTP 9
+RG+PLP P
Sbjct: 25 SRGRPLPGP 33
>sp|X_HBVB2|PROTEIN X|Hepatitis B virus genotype B2
Query: 1 ARGQPLPTP 9
+RG+PLP P
Sbjct: 25 SRGRPLPGP 33
>sp|X_HBVF4|PROTEIN X|Hepatitis B virus genotype F2
Query: 1 ARGQPLPTP 9
+RG+PLP P
Sbjct: 25 SRGRPLPGP 33
>sp|X_HBVB7|PROTEIN X|Hepatitis B virus genotype B1
Query: 1 ARGQPLPTP 9
+RG+PLP P
Sbjct: 25 SRGRPLPGP 33
>sp|X_HBVB1|PROTEIN X|Hepatitis B virus genotype B1
Query: 1 ARGQPLPTP 9
+RG+PLP P
Sbjct: 25 SRGRPLPGP 33
>sp|MATRX_MUMPS|MATRIX protein|Mumps virus (strain SBL) (MuV)
Query: 5 PLPTPP 10
PLP PP
Sbjct: 9 PLPKPP 14
>sp|MATRX_MUMPJ|MATRIX protein|Mumps virus genotype A (strain
Query: 5 PLPTPP 10
PLP PP
Sbjct: 9 PLPKPP 14
>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)
Query: 5 PLPTPP 10
PLP PP
Sbjct: 9 PLPKPP 14
>sp|X_HBVB8|PROTEIN X|Hepatitis B virus genotype B1
Query: 1 ARGQPLPTP 9
+RG+PLP P
Sbjct: 25 SRGRPLPGP 33
>sp|X_HBVB6|PROTEIN X|Hepatitis B virus genotype B2
Query: 1 ARGQPLPTP 9
+RG+PLP P
Sbjct: 25 SRGRPLPGP 33
>sp|X_HBVB3|PROTEIN X|Hepatitis B virus genotype B2
Query: 1 ARGQPLPTP 9
+RG+PLP P
Sbjct: 25 SRGRPLPGP 33
>sp|MATRX_MUMPM|MATRIX protein|Mumps virus genotype B (strain
Query: 5 PLPTPP 10
PLP PP
Sbjct: 9 PLPKPP 14
>sp|X_HBVB5|PROTEIN X|Hepatitis B virus genotype B2
Query: 1 ARGQPLPTP 9
+RG+PLP P
Sbjct: 25 SRGRPLPGP 33
>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain
Query: 5 PLPTPP 10
PLP PP
Sbjct: 9 PLPKPP 14
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 2 RGQPLPTP 9
+G+P P P
Sbjct: 450 QGEPCPLP 457
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 RGQPLP 7
RG+P+P
Sbjct: 55 RGRPVP 60
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 2 RGQPLPTP 9
+GQPLP P
Sbjct: 58 QGQPLPQP 65
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 ARGQPL 6
ARG+PL
Sbjct: 93 ARGKPL 98
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 1 ARGQPL 6
ARG+PL
Sbjct: 93 ARGKPL 98
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 ARGQPL 6
ARG+PL
Sbjct: 93 ARGKPL 98
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 5 PLPTPP 10
P P PP
Sbjct: 1770 PFPQPP 1775
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 5 PLPTPP 10
P P PP
Sbjct: 1770 PFPQPP 1775
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 5 PLPTPP 10
P P PP
Sbjct: 1770 PFPQPP 1775
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 QPLPTPP 10
QPL PP
Sbjct: 787 QPLRLPP 793
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 3 GQPLPTPP 10
G PL TPP
Sbjct: 314 GAPLTTPP 321
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 3 GQPLPTPP 10
G PL TPP
Sbjct: 314 GAPLTTPP 321
>sp|VP16_HHV1F|TEGUMENT protein VP16|Human herpesvirus 1 (strain F)
Query: 3 GQPLPTPP 10
G PL TPP
Sbjct: 316 GAPLTTPP 323
>sp|VP16_HHV11|TEGUMENT protein VP16|Human herpesvirus 1 (strain 17)
Query: 3 GQPLPTPP 10
G PL TPP
Sbjct: 316 GAPLTTPP 323
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 RGQPLP 7
RG P+P
Sbjct: 925 RGMPIP 930
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 2 RGQPLP 7
RG P+P
Sbjct: 925 RGMPIP 930
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 2 RGQPL 6
RGQPL
Sbjct: 388 RGQPL 392
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 1 ARGQPLPTPP 10
A G P TPP
Sbjct: 461 ANGMPPLTPP 470
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ARGQPLPTPP 10
A G P TPP
Sbjct: 461 ANGMPPLTPP 470
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 GQPLPTPP 10
G P PTPP
Sbjct: 729 GLPYPTPP 736
>sp|UL79_HCMVM|PROTEIN UL79|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ARGQPLPT 8
+RGQPL +
Sbjct: 36 SRGQPLSS 43
>sp|UL79_HCMVA|PROTEIN UL79|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ARGQPLPT 8
+RGQPL +
Sbjct: 36 SRGQPLSS 43
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 1 ARGQPLPTPP 10
+RG P PT P
Sbjct: 644 SRGHPSPTTP 653
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 GQPLPT 8
G PLPT
Sbjct: 330 GGPLPT 335
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 1 ARGQPLPTPP 10
+RG P PT P
Sbjct: 644 SRGHPSPTTP 653
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 GQPLPT 8
G PLPT
Sbjct: 330 GGPLPT 335
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 1 ARGQPLPTP 9
ARG P+ TP
Sbjct: 425 ARGAPVGTP 433
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ARGQPLPTPP 10
A G PLP P
Sbjct: 247 ATGNPLPAAP 256
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 ARGQPLPTPP 10
A G PLP P
Sbjct: 247 ATGNPLPAAP 256
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 ARGQPLPTPP 10
A G PLP P
Sbjct: 247 ATGNPLPAAP 256
>sp|X_HBVB4|PROTEIN X|Hepatitis B virus genotype B/C
Query: 1 ARGQPLPTP 9
+RG+P P P
Sbjct: 25 SRGRPFPGP 33
>sp|Y168_ADE02|UNCHARACTERIZED protein C-168|Human adenovirus C serotype 2
Query: 1 ARGQPLPTPP 10
+RG+ TPP
Sbjct: 76 SRGRSWKTPP 85
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 1 ARGQPL 6
+RGQPL
Sbjct: 109 SRGQPL 114
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 RGQPLP 7
RG PLP
Sbjct: 466 RGDPLP 471
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 4 QPLPTPP 10
+P+PT P
Sbjct: 1327 EPVPTSP 1333
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 RGQPLP 7
RG PLP
Sbjct: 466 RGDPLP 471
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 1 ARGQPL 6
RGQPL
Sbjct: 109 GRGQPL 114
121|Sequence|601|610|LPTPPAPPDP
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LPTPPAPPD 9
LPTP PPD
Sbjct: 723 LPTPRGPPD 731
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PTPPAPP 8
P PP PP
Sbjct: 1950 PVPPNPP 1956
Query: 5 PAPPDP 10
P PP+P
Sbjct: 1950 PVPPNP 1955
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PTPPAPP 8
P PP PP
Sbjct: 1950 PIPPNPP 1956
Query: 5 PAPPDP 10
P PP+P
Sbjct: 1950 PIPPNP 1955
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PTPPAPP 8
P PP PP
Sbjct: 1950 PIPPNPP 1956
Query: 5 PAPPDP 10
P PP+P
Sbjct: 1950 PIPPNP 1955
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PTPPAPP 8
P PP PP
Sbjct: 1950 PMPPNPP 1956
Query: 5 PAPPDP 10
P PP+P
Sbjct: 1950 PMPPNP 1955
>sp|E4RF4_ADE02|EARLY 4 ORF4 protein|Human adenovirus C serotype 2
Query: 1 LPTPPAPP 8
LP PAPP
Sbjct: 3 LPALPAPP 10
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PTPPAPP 8
P PP PP
Sbjct: 1950 PIPPNPP 1956
Query: 5 PAPPDP 10
P PP+P
Sbjct: 1950 PIPPNP 1955
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 2 PTPPAPPD 9
P PP PPD
Sbjct: 632 PHPPLPPD 639
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LPTPPAPP 8
LP+PP P
Sbjct: 233 LPSPPKLP 240
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LPTPPAPP 8
LP+PP P
Sbjct: 233 LPSPPKLP 240
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 PAPPDP 10
P PPDP
Sbjct: 143 PLPPDP 148
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1823 TPPGTSDP 1830
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1819 TPPGTSDP 1826
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1823 TPPGTSDP 1830
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 2 PTPPAPP 8
PTP PP
Sbjct: 252 PTPTTPP 258
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1822 TPPGTTDP 1829
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 PAPPDP 10
P PPDP
Sbjct: 143 PLPPDP 148
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1822 TPPGTTDP 1829
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1821 TPPGTSDP 1828
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1822 TPPGTTDP 1829
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 2 PTPPAPPD 9
P P PPD
Sbjct: 627 PIPNGPPD 634
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1822 TPPGTTDP 1829
>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)
Query: 3 TPPAPPD 9
TP APPD
Sbjct: 21 TPSAPPD 27
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1791 TPPGATDP 1798
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1791 TPPGATDP 1798
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1791 TPPGATDP 1798
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 1 LPTPPAP 7
LP PP+P
Sbjct: 625 LPPPPSP 631
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1815 TPPGTTDP 1822
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1791 TPPGTTDP 1798
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1791 TPPGTTDP 1798
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1792 TPPGSRDP 1799
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1792 TPPGSRDP 1799
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1792 TPPGSRDP 1799
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1792 TPPGSRDP 1799
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1792 TPPGSRDP 1799
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1792 TPPGSRDP 1799
>sp|VP30_EBOZM|TRANSCRIPTIONAL activator VP30|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 LPTPPAPPD 9
L PPAP D
Sbjct: 62 LTVPPAPKD 70
>sp|VP30_EBOZ5|TRANSCRIPTIONAL activator VP30|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 LPTPPAPPD 9
L PPAP D
Sbjct: 62 LTVPPAPKD 70
>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)
Query: 2 PTPPAPPD 9
P PP P +
Sbjct: 28 PQPPIPSE 35
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1792 TPPGSRDP 1799
>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PTPPAPPD 9
P PP P +
Sbjct: 28 PQPPIPSE 35
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1817 TPPGTNDP 1824
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 4 PPAPP 8
PP PP
Sbjct: 2864 PPPPP 2868
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PPAPPDP 10
PPA DP
Sbjct: 373 PPAGGDP 379
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1814 TPPGRGDP 1821
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1814 TPPGRGDP 1821
>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PTPPAPPDP 10
P P PP P
Sbjct: 156 PRRPKPPVP 164
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1821 TPPGTHDP 1828
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LPTPPAPPD 9
+PT P+P +
Sbjct: 71 VPTDPSPQE 79
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LPTPPAPPD 9
+PT P+P +
Sbjct: 74 VPTDPSPQE 82
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LPTPPAPPD 9
+PT P+P +
Sbjct: 74 VPTDPSPQE 82
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 TPPAPPDP 10
TPP DP
Sbjct: 1382 TPPGSRDP 1389
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 4 PPAPPD 9
PPA PD
Sbjct: 212 PPASPD 217
>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)
Query: 5 PAPPDP 10
P PPDP
Sbjct: 213 PPPPDP 218
>sp|NS1_I01A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 PPAPPD 9
PP PP+
Sbjct: 207 PPLPPN 212
>sp|NS1_I01A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 4 PPAPPD 9
PP PP+
Sbjct: 207 PPLPPN 212
>sp|NS1_I00A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Duck/Hong
Query: 4 PPAPPD 9
PP PP+
Sbjct: 207 PPLPPN 212
>sp|VP30_EBORE|TRANSCRIPTIONAL activator VP30|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 LPTPPAPPD 9
L PPAP D
Sbjct: 62 LIVPPAPKD 70
>sp|VP30_EBORR|TRANSCRIPTIONAL activator VP30|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 LPTPPAPPD 9
L PPAP D
Sbjct: 62 LIVPPAPKD 70
>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PTPPAPPD 9
P P APP+
Sbjct: 455 PEPTAPPE 462
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 4 PPAPP 8
PPAPP
Sbjct: 598 PPAPP 602
>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PTPPAPPD 9
P P APP+
Sbjct: 453 PEPTAPPE 460
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 TPPAPPDP 10
T P PPDP
Sbjct: 2375 TSPVPPDP 2382
>sp|V_MEASI|NON-STRUCTURAL protein V|Measles virus (strain IP-3-Ca) (MeV)
Query: 5 PAPPDP 10
P PPDP
Sbjct: 213 PPPPDP 218
>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 5 PAPPDP 10
P PPDP
Sbjct: 213 PPPPDP 218
>sp|VEMP_MERS1|ENVELOPE small membrane protein|Middle East respiratory syndrome-related
Query: 4 PPAPPD 9
PP PPD
Sbjct: 74 PPLPPD 79
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 PTPPAPPD 9
PT P PD
Sbjct: 57 PTMPVKPD 64
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 4 PPAPP 8
PP PP
Sbjct: 387 PPLPP 391
>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PTPPAPPD 9
P P APP+
Sbjct: 453 PEPTAPPE 460
>sp|NS1_I02A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 4 PPAPPD 9
PP PP+
Sbjct: 190 PPLPPN 195
>sp|NS1_I78A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New
Query: 4 PPAPP 8
PP PP
Sbjct: 212 PPLPP 216
>sp|NS1_I18A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Brevig
Query: 4 PPAPP 8
PP PP
Sbjct: 212 PPLPP 216
>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LPTPPAPP 8
+PTP PP
Sbjct: 291 IPTPAPPP 298
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 PPAPP 8
PP PP
Sbjct: 183 PPTPP 187
>sp|NS1_I01A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 PPAPPD 9
PP PP+
Sbjct: 207 PPLPPN 212
>sp|NS1_I85A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 4 PPAPP 8
PP PP
Sbjct: 212 PPLPP 216
>sp|NS1_I80A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 4 PPAPP 8
PP PP
Sbjct: 212 PPLPP 216
>sp|NS1_I78A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New
Query: 4 PPAPP 8
PP PP
Sbjct: 212 PPLPP 216
>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 5 PAPPDP 10
P PPDP
Sbjct: 213 PPPPDP 218
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PTPPAPPD 9
P P APP+
Sbjct: 453 PEPTAPPE 460
>sp|NS1_I01A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 PPAPPD 9
PP PP+
Sbjct: 207 PPLPPN 212
>sp|NS1_I59A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 4 PPAPP 8
PP PP
Sbjct: 212 PPLPP 216
>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)
Query: 5 PAPPDP 10
P PPDP
Sbjct: 213 PPPPDP 218
>sp|V_MEASE|NON-STRUCTURAL protein V|Measles virus (strain Edmonston) (MeV)
Query: 5 PAPPDP 10
P PPDP
Sbjct: 213 PPPPDP 218
>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 5 PAPPDP 10
P PPDP
Sbjct: 213 PPPPDP 218
>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)
Query: 1 LPTPPAPP 8
+PTP PP
Sbjct: 291 IPTPEPPP 298
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PTPPAPPD 9
P P APP+
Sbjct: 453 PEPTAPPE 460
>sp|GAG_HV1N5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PTPPAPPD 9
P P APP+
Sbjct: 453 PEPTAPPE 460
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PTPPAPPD 9
P P APP+
Sbjct: 453 PEPTAPPE 460
>sp|VP30_EBOSU|TRANSCRIPTIONAL activator VP30|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 LPTPPAPPD 9
L PPAP D
Sbjct: 62 LTVPPAPKD 70
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PTPPAPP 8
P P APP
Sbjct: 459 PEPTAPP 465
>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)
Query: 5 PAPPDP 10
P PPDP
Sbjct: 213 PPPPDP 218
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 PTPPAPPD 9
PT P PD
Sbjct: 87 PTMPFSPD 94
>sp|GAG_HV1J3|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PTPPAPPD 9
P P APP+
Sbjct: 453 PEPTAPPE 460
>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PTPPAPPD 9
P P APP+
Sbjct: 455 PEPTAPPE 462
>sp|NSS_TOSV|NON-STRUCTURAL protein NS-S|Toscana virus (Tos)
Query: 1 LPTPPAPP 8
LP+PP P
Sbjct: 307 LPSPPHYP 314
>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 5 PAPPDP 10
P PPDP
Sbjct: 213 PPPPDP 218
>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)
Query: 5 PAPPDP 10
P PPDP
Sbjct: 213 PPPPDP 218
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 5 PAPPDP 10
P PPDP
Sbjct: 98 PLPPDP 103
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 PTPPAPPD 9
PT P PD
Sbjct: 88 PTMPFTPD 95
>sp|NS1_I82A8|NON-STRUCTURAL protein 1|Influenza A virus (strain
Query: 4 PPAPP 8
PP PP
Sbjct: 212 PPLPP 216
>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 5 PAPPDP 10
P PPDP
Sbjct: 213 PPPPDP 218
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 2 PTPPAPPDP 10
PTP P P
Sbjct: 328 PTPAVTPQP 336
>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PTPPAPP 8
P P APP
Sbjct: 448 PEPTAPP 454
>sp|EP84_HCMVA|EARLY phosphoprotein p84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LPTPPAPPDP 10
+ TP APP P
Sbjct: 540 IETPAAPPRP 549
122|Sequence|606|615|APPDPFKSPA
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 1 APPDPFKSPA 10
+PP PF PA
Sbjct: 819 SPPVPFHQPA 828
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 1 APPDPFKSP 9
PPD KSP
Sbjct: 294 TPPDSIKSP 302
>sp|PG083_VARV|CORE protease OPG082|Variola virus
Query: 2 PPDPFKS 8
PP FKS
Sbjct: 343 PPKSFKS 349
>sp|PG083_VAR67|CORE protease OPG082|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 PPDPFKS 8
PP FKS
Sbjct: 343 PPKSFKS 349
>sp|PG083_VACCC|CORE protease OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PPDPFKS 8
PP FKS
Sbjct: 343 PPKSFKS 349
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 5 PFKSPA 10
PF SPA
Sbjct: 1183 PFMSPA 1188
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 1 APPDPFKSP 9
A P PFK P
Sbjct: 659 ATPPPFKKP 667
>sp|NSP2_ROTWI|NON-STRUCTURAL protein 2|Rotavirus A (isolate RVA/Human/United
Query: 1 APPDPFK 7
APP FK
Sbjct: 52 APPPQFK 58
>sp|NSP2_ROTHW|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 1 APPDPFK 7
APP FK
Sbjct: 52 APPPQFK 58
>sp|NSP2_ROTHT|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 1 APPDPFK 7
APP FK
Sbjct: 52 APPPQFK 58
>sp|NSP2_ROTHP|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 1 APPDPFK 7
APP FK
Sbjct: 52 APPPQFK 58
>sp|NSP2_ROTHL|NON-STRUCTURAL protein 2|Rotavirus A (strain
Query: 1 APPDPFK 7
APP FK
Sbjct: 52 APPPQFK 58
>sp|NSP2_ROTHK|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 1 APPDPFK 7
APP FK
Sbjct: 52 APPPQFK 58
>sp|NSP2_ROTHD|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 1 APPDPFK 7
APP FK
Sbjct: 52 APPPQFK 58
>sp|NSP2_ROTH7|NON-STRUCTURAL protein 2|Rotavirus A (isolate RVA/Human/United
Query: 1 APPDPFK 7
APP FK
Sbjct: 52 APPPQFK 58
>sp|NSP2_ROTH6|NON-STRUCTURAL protein 2|Rotavirus A (strain
Query: 1 APPDPFK 7
APP FK
Sbjct: 52 APPPQFK 58
>sp|NSP2_ROTH3|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 1 APPDPFK 7
APP FK
Sbjct: 52 APPPQFK 58
>sp|NSP2_ROTAD|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 1 APPDPFK 7
APP FK
Sbjct: 52 APPPQFK 58
>sp|NSP2_ROT41|NON-STRUCTURAL protein 2|Rotavirus A (isolate
Query: 1 APPDPFK 7
APP FK
Sbjct: 52 APPPQFK 58
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 PDPFKSPA 10
PDP K A
Sbjct: 408 PDPVKKDA 415
>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)
Query: 3 PDPFKSPA 10
PDP K A
Sbjct: 419 PDPVKKDA 426
>sp|VE7_HPV6B|PROTEIN E7|Human papillomavirus type 6b
Query: 2 PPDP 5
PPDP
Sbjct: 17 PPDP 20
>sp|VE7_HPV6A|PROTEIN E7|Human papillomavirus type 6a
Query: 2 PPDP 5
PPDP
Sbjct: 17 PPDP 20
>sp|VE7_HPV44|PROTEIN E7|Human papillomavirus 44
Query: 2 PPDP 5
PPDP
Sbjct: 17 PPDP 20
>sp|UL124_HCMVM|UNCHARACTERIZED protein UL124|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 APPDPFKSP 9
APP P KSP
Sbjct: 126 APPLPEKSP 134
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PPDPFKSP 9
P D F+SP
Sbjct: 9 PMDGFESP 16
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PPDPFKSP 9
P +P+ SP
Sbjct: 661 PTNPYNSP 668
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 3 PDPFKSPA 10
P PF SP
Sbjct: 585 PFPFASPG 592
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 3 PDPFKSPA 10
P PF SP
Sbjct: 585 PFPFASPG 592
123|Sequence|611|620|FKSPASKGPL
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PASKGP 9
PAS+GP
Sbjct: 719 PASRGP 724
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PASKGP 9
PA++GP
Sbjct: 714 PATRGP 719
>sp|VPR_HV1MA|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 2 KSPASKGP 9
++PA +GP
Sbjct: 3 QAPADQGP 10
>sp|VPR_HV1EL|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 2 KSPASKGP 9
++PA +GP
Sbjct: 3 QAPADQGP 10
124|Sequence|616|625|SKGPLASTDL
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 2 KGPLASTDL 10
K PLA TD+
Sbjct: 439 KTPLALTDI 447
>sp|EBNA2_EBVA8|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SKGPLAST 8
S+GPLAS+
Sbjct: 97 SQGPLASS 104
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 3 GPLASTDL 10
GP STDL
Sbjct: 512 GPKLSTDL 519
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 3 GPLAST 8
GP+AST
Sbjct: 103 GPVAST 108
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 3 GPLAST 8
GP+AST
Sbjct: 103 GPVAST 108
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 3 GPLAST 8
GP+AST
Sbjct: 103 GPVAST 108
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 3 GPLAST 8
GP+AST
Sbjct: 103 GPVAST 108
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 GPLASTDL 10
GP++ TD+
Sbjct: 867 GPMSPTDI 874
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 KGPLAST 8
+GPLAS+
Sbjct: 231 QGPLASS 237
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 KGPLAST 8
+GPLAS+
Sbjct: 224 QGPLASS 230
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 KGPLAST 8
+GPLAS+
Sbjct: 231 QGPLASS 237
125|Sequence|621|630|ASTDLVTDWT
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 STDLVTDW 9
+TDL+ DW
Sbjct: 148 NTDLLPDW 155
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 ASTDLVTDW 9
AS LVTDW
Sbjct: 1092 ASGKLVTDW 1100
>sp|NSP2_ROTB2|NON-STRUCTURAL protein 2|Rotavirus X (isolate
Query: 1 ASTDLVTDW 9
++ +L+TDW
Sbjct: 87 STRNLITDW 95
>sp|NSP2_ROTJ1|NON-STRUCTURAL protein 2|Rotavirus X (strain
Query: 1 ASTDLVTDW 9
++ +L+TDW
Sbjct: 87 STRNLITDW 95
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 4 DLVTDWT 10
D+++DWT
Sbjct: 2899 DIISDWT 2905
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 ASTDLVTDW 9
AS L+TDW
Sbjct: 1091 ASGKLITDW 1099
>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 5 LVTDW 9
LVTDW
Sbjct: 91 LVTDW 95
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 ASTDLVTDW 9
+S LVTDW
Sbjct: 1096 SSGRLVTDW 1104
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 STDLVTDW 9
S LVTDW
Sbjct: 1097 SGKLVTDW 1104
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 3 TDLVTDWT 10
TD TDWT
Sbjct: 2046 TDPDTDWT 2053
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 STDLVTDW 9
S L+TDW
Sbjct: 1091 SGKLITDW 1098
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 STDLVTDW 9
S L+TDW
Sbjct: 1095 SGKLITDW 1102
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 STDLVTDW 9
S L+TDW
Sbjct: 1098 SGKLITDW 1105
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 STDLVTDW 9
S L+TDW
Sbjct: 1098 SGKLITDW 1105
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 STDLVTDW 9
S L+TDW
Sbjct: 1098 SGKLITDW 1105
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 STDLVTDW 9
S L+TDW
Sbjct: 1098 SGKLITDW 1105
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 STDLVTDW 9
S L+TDW
Sbjct: 1098 SGKLITDW 1105
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 STDLVTDW 9
S L+TDW
Sbjct: 1095 SGKLITDW 1102
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 STDLVTDW 9
S L+TDW
Sbjct: 1098 SGKLITDW 1105
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 STDLVTDW 9
S L+TDW
Sbjct: 1098 SGKLITDW 1105
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 STDLVTDW 9
S L+TDW
Sbjct: 1098 SGKLITDW 1105
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 2 STDLVTDW 9
S L+TDW
Sbjct: 1026 SGKLITDW 1033
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 4 DLVTDW 9
DLV DW
Sbjct: 971 DLVRDW 976
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 ASTDLVTDW 9
AS L+T+W
Sbjct: 798 ASGKLITEW 806
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 ASTDLVTDW 9
AS L+T+W
Sbjct: 1078 ASGKLITEW 1086
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 ASTDLVTDW 9
AS L+T+W
Sbjct: 1078 ASGKLITEW 1086
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 ASTDLVTDW 9
AS L+T+W
Sbjct: 1078 ASGKLITEW 1086
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 ASTDLVTDW 9
AS L+T+W
Sbjct: 1078 ASGKLITEW 1086
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 ASTDLVTDW 9
AS L+T+W
Sbjct: 1078 ASGKLITEW 1086
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 ASTDLVTDW 9
AS L+T+W
Sbjct: 1078 ASGKLITEW 1086
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 ASTDLVTDW 9
AS L+T+W
Sbjct: 1078 ASGKLITEW 1086
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 ASTDLVTDW 9
AS L+T+W
Sbjct: 1078 ASGKLITEW 1086
126|Sequence|626|635|VTDWTCGLSV
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 2 TDWTCGLS 9
TDW GLS
Sbjct: 1819 TDWELGLS 1826
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 VTDWTC 6
VTDW C
Sbjct: 1101 VTDWCC 1106
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 VTDWTC 6
VTDW C
Sbjct: 1097 VTDWCC 1102
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VTDWTCG 7
VT W CG
Sbjct: 388 VTCWNCG 394
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VTDWTCG 7
VT W CG
Sbjct: 387 VTCWNCG 393
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 VTDWTCG 7
VT W CG
Sbjct: 388 VTCWNCG 394
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 VTDWTCG 7
VT W CG
Sbjct: 387 VTCWNCG 393
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 VTDWTCG 7
VT W CG
Sbjct: 388 VTCWNCG 394
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VTDWTCG 7
VT W CG
Sbjct: 388 VTCWNCG 394
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 4 WTCG 7
WTCG
Sbjct: 157 WTCG 160
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 3 DWTCGLS 9
DW GLS
Sbjct: 434 DWNIGLS 440
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 3 DWTCGLS 9
DW GLS
Sbjct: 399 DWNIGLS 405
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 3 DWTCGLS 9
DW GLS
Sbjct: 398 DWNIGLS 404
>sp|RL8A_HCMVM|PROTEIN RL8A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TDWTC 6
T WTC
Sbjct: 13 TSWTC 17
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 VTDWTCGLSV 10
+TD TC +SV
Sbjct: 580 LTDSTCAVSV 589
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 VTDWTCGLSV 10
+TD TC + +
Sbjct: 1135 ITDQTCSIDI 1144
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 4 WTCGLSV 10
W+ GLS+
Sbjct: 456 WSAGLSI 462
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 3 DWTCGL 8
DW C L
Sbjct: 221 DWVCAL 226
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 3 DWTCGLS 9
DW GLS
Sbjct: 396 DWNFGLS 402
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 4 WTCGLS 9
WT GLS
Sbjct: 960 WTAGLS 965
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 VTDWTCGLSV 10
V+ W+ G+S+
Sbjct: 451 VSLWSAGMSI 460
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 4 WTCGLSV 10
W+ GLS+
Sbjct: 456 WSSGLSI 462
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 4 WTCGLSV 10
W+ GLS+
Sbjct: 456 WSSGLSI 462
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 4 WTCGLSV 10
W+ GLS+
Sbjct: 456 WSSGLSI 462
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 WTCGLSV 10
W+ GLS+
Sbjct: 456 WSSGLSI 462
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 3 DWTCGLS 9
DW GLS
Sbjct: 396 DWNFGLS 402
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 3 DWTCGLS 9
DW GLS
Sbjct: 396 DWNFGLS 402
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 4 WTCGLSV 10
W+ GLS+
Sbjct: 456 WSSGLSI 462
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 3 DWTCGLS 9
DW GLS
Sbjct: 397 DWNFGLS 403
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 TDWTCGLSV 10
+W CG S+
Sbjct: 6460 AEWKCGYSM 6468
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 VTDWTC 6
VTDW C
Sbjct: 1101 VTDWCC 1106
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 VTDWT 5
V+DWT
Sbjct: 156 VSDWT 160
>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)
Query: 1 VTDWTCGLSV 10
V ++CGLS+
Sbjct: 323 VYKFSCGLSL 332
>sp|TEG6_VZVO|TEGUMENT protein UL55 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 TDWTC 6
T WTC
Sbjct: 36 TTWTC 40
>sp|TEG6_VZVD|TEGUMENT protein UL55 homolog|Varicella-zoster virus (strain Dumas)
Query: 2 TDWTC 6
T WTC
Sbjct: 36 TTWTC 40
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 2 TDWTCGLS 9
T+W G+S
Sbjct: 1818 TNWEVGIS 1825
>sp|U23_HHV6Z|PROTEIN U23|Human herpesvirus 6B (strain Z29)
Query: 4 WTCGLS 9
W CG+S
Sbjct: 250 WICGIS 255
>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)
Query: 2 TDWTCGLS 9
+D+TC L+
Sbjct: 516 SDFTCSLN 523
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 VTDWTC 6
+TDW C
Sbjct: 1102 ITDWCC 1107
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 VTDWTC 6
+TDW C
Sbjct: 1096 ITDWCC 1101
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 3 DWTCGLSV 10
DW GL++
Sbjct: 402 DWNFGLTL 409
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 VTDWTC 6
+TDW C
Sbjct: 1102 ITDWCC 1107
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 VTDWTC 6
+TDW C
Sbjct: 1102 ITDWCC 1107
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 VTDWTC 6
+TDW C
Sbjct: 1095 ITDWCC 1100
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 3 DWTCGL 8
DW C +
Sbjct: 217 DWICAM 222
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 VTDWTC 6
+TDW C
Sbjct: 1102 ITDWCC 1107
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 VTDWTC 6
+TDW C
Sbjct: 1099 ITDWCC 1104
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 VTDWTC 6
+TDW C
Sbjct: 1030 ITDWCC 1035
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 VTDWTC 6
+TDW C
Sbjct: 1102 ITDWCC 1107
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 VTDWTC 6
+TDW C
Sbjct: 1099 ITDWCC 1104
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 VTDWTC 6
+TDW C
Sbjct: 1102 ITDWCC 1107
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 VTDWTC 6
+TDW C
Sbjct: 1102 ITDWCC 1107
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 VTDWTC 6
+TDW C
Sbjct: 1102 ITDWCC 1107
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 3 DWTCGLSV 10
DW GL++
Sbjct: 429 DWNFGLTL 436
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 3 DWTCGLSV 10
DW GL++
Sbjct: 402 DWNFGLTL 409
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 3 DWTCGLSV 10
DW GL++
Sbjct: 400 DWNFGLTL 407
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 3 DWTCGL 8
DW C +
Sbjct: 216 DWICAI 221
127|Sequence|631|644|CGLSVLGPTDGGDM
>sp|VPR_HV2RO|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 1 CGLSVLGPTDGGD 13
CG S +G T GG+
Sbjct: 81 CGHSRIGQTRGGN 93
>sp|VPR_HV2NZ|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 1 CGLSVLGPTDGGD 13
CG S +G T GG+
Sbjct: 81 CGHSRIGQTRGGN 93
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 CGLSVLGP 8
CGL++ GP
Sbjct: 2031 CGLAINGP 2038
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 CGLSVLGP 8
CGL++ GP
Sbjct: 2031 CGLAINGP 2038
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 CGLSVLGP 8
CGL++ GP
Sbjct: 2031 CGLAINGP 2038
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LSVLGPTDG 11
+SVLGP G
Sbjct: 12 ISVLGPISG 20
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LSVLGPTDG 11
+SVLGP G
Sbjct: 12 ISVLGPISG 20
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 CGLSVLGP 8
CG +LGP
Sbjct: 1198 CGAPILGP 1205
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GLSVLGPTDGGD 13
G SV+G T G D
Sbjct: 514 GGSVIGSTGGND 525
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GLSVLGPTDGGD 13
G SV+G T G D
Sbjct: 514 GGSVIGSTGGND 525
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 GLSVLGPTDGGD 13
G V+GP+D D
Sbjct: 3140 GEGVIGPSDSQD 3151
Query: 1 CGLSVLG 7
CG+ VLG
Sbjct: 1168 CGMVVLG 1174
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 GLSVLGPTDGGD 13
G V+GP+D D
Sbjct: 3140 GEGVIGPSDSQD 3151
>sp|UL24_HHV8P|PROTEIN UL24 homolog|Human herpesvirus 8 type P
Query: 2 GLSVLGPTDG 11
G +LGPT G
Sbjct: 200 GGKILGPTPG 209
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 3 LSVLGPTDGGDM 14
L LGP +GG +
Sbjct: 846 LVFLGPMEGGGL 857
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 SVLGPTDG 11
SVLGP G
Sbjct: 3 SVLGPISG 10
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 4 SVLGPTDGGDM 14
S L DGGD+
Sbjct: 298 SCLAAIDGGDV 308
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 4 SVLGPTDGGDM 14
S L DGGD+
Sbjct: 298 SCLAAIDGGDV 308
>sp|PHOSP_PI2HT|PHOSPHOPROTEIN parainfluenza 2 virus (strain
Query: 5 VLGPTDGG 12
+ GPT GG
Sbjct: 304 IAGPTSGG 311
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 3 LSVLGPTDGG 12
L LGP +GG
Sbjct: 845 LLFLGPMEGG 854
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 4 SVLGPTDGGDM 14
S L DGGD+
Sbjct: 298 SCLAALDGGDV 308
>sp|CAPSP_ADE12|PENTON protein|Human adenovirus A serotype 12
Query: 6 LGPTDG 11
LGPT+G
Sbjct: 36 LGPTEG 41
>sp|PHOSP_PI2H|PHOSPHOPROTEIN parainfluenza 2 virus (HPIV-2)
Query: 5 VLGPTDGG 12
+ GPT GG
Sbjct: 304 IAGPTSGG 311
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 3 LSVLGPTDGG 12
L LGP +GG
Sbjct: 844 LLFLGPMEGG 853
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 3 LSVLGPTDGG 12
L LGP +GG
Sbjct: 844 LLFLGPMEGG 853
>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 GLSVLGPTDG 11
G S+LGP G
Sbjct: 284 GDSILGPPSG 293
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 3 LSVLGPTDGG 12
L LGP +GG
Sbjct: 844 LLFLGPMEGG 853
>sp|VFLIP_HHV8P|VIRAL FLICE protein|Human herpesvirus 8 type P
Query: 2 GLSVLGPTD 10
L +LGPTD
Sbjct: 139 NLDLLGPTD 147
>sp|IR14_HCMVA|UNCHARACTERIZED protein IRL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 10 DGGDM 14
DGGDM
Sbjct: 150 DGGDM 154
>sp|VE2_HPV70|REGULATORY protein E2|Human papillomavirus type 70
Query: 1 CGLSVLGPTDG 11
CG+S TDG
Sbjct: 248 CGVSRPSETDG 258
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 CGLSVLGPTDGGDM 14
CG S+ G G M
Sbjct: 2037 CGASIAGHVKNGSM 2050
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 GLSVLGPTD 10
G VLG TD
Sbjct: 1667 GFRVLGTTD 1675
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 3 LSVLGPTDGGDM 14
L V P D GDM
Sbjct: 774 LEVQVPPDPGDM 785
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 GLSVLGPTD 10
G VLG TD
Sbjct: 1667 GFRVLGTTD 1675
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 2 GLSVLGPTDG 11
LSV GP G
Sbjct: 1733 ALSVAGPVPG 1742
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus
Query: 7 GPTDGGD 13
GP GGD
Sbjct: 56 GPLPGGD 62
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus
Query: 7 GPTDGGD 13
GP GGD
Sbjct: 56 GPLPGGD 62
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 6 LGPTDGG 12
+GP DGG
Sbjct: 163 VGPEDGG 169
>sp|KITH_HHV23|THYMIDINE kinase|Human herpesvirus 2 (strain 333)
Query: 7 GPTDG 11
GPTDG
Sbjct: 21 GPTDG 25
>sp|KITH_HHV2H|THYMIDINE kinase|Human herpesvirus 2 (strain HG52)
Query: 7 GPTDG 11
GPTDG
Sbjct: 21 GPTDG 25
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 GLSVLGPTDGGD 13
G V+GP D D
Sbjct: 3139 GEGVIGPADSQD 3150
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 LSVLGPTDGG 12
+ VL PT GG
Sbjct: 3085 VKVLRPTPGG 3094
>sp|VL2_HPV09|MINOR capsid protein L2|Human papillomavirus 9
Query: 5 VLGPTD 10
++GPTD
Sbjct: 95 IIGPTD 100
>sp|GL_HHV1K|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain KOS)
Query: 2 GLSVLGPTDG 11
G LGPT+G
Sbjct: 162 GRQDLGPTNG 171
>sp|GL_HHV11|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain 17)
Query: 2 GLSVLGPTDG 11
G LGPT+G
Sbjct: 162 GRQDLGPTNG 171
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 2 GLSVLGPTDGGDM 14
G +V PT G M
Sbjct: 287 GSAVYSPTPSGSM 299
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 2 GLSVLGPTDGGDM 14
G S+ PT G M
Sbjct: 287 GSSIYYPTPSGSM 299
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 2 GLSVLGPTDGGDM 14
G +V PT G M
Sbjct: 314 GSAVYSPTPSGSM 326