ZN746_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|SIPAAVAEAM

>sp|AROC_HALMD|CHORISMATE synthase|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 SIPAAVAEAM 10
SIPA + +AM
Sbjct: 230 SIPARLGQAM 239




2|SequenceR|15|6|AMTWPSIPAA

>sp|DYRA_HALVD|DIHYDROFOLATE reductase HdrA|Haloferax volcanii (strain ATCC 29605

Query: 4 WPSIPA 9
WPSIPA
Sbjct: 23 WPSIPA 28


>sp|SYT_METTH|THREONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 MTWPSIPAA 10
+TW ++PA+
Sbjct: 297 LTWKNLPAS 305


>sp|SYT_METS3|THREONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 MTWPSIPA 9
+TW ++PA
Sbjct: 298 ITWKNLPA 305


>sp|FTHS_HALMA|FORMATE--TETRAHYDROFOLATE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 AMTWPSIPA 9
A+T P +PA
Sbjct: 526 ALTMPGLPA 534


>sp|COFE_HALSA|COENZYME F420:L-glutamate ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 AMTWPSIPAA 10
A+ W +PAA
Sbjct: 164 ALGWAGLPAA 173


>sp|COFE_HALS3|COENZYME F420:L-glutamate ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 AMTWPSIPAA 10
A+ W +PAA
Sbjct: 164 ALGWAGLPAA 173




3|SequenceR|20|11|AQITAAMTWP

***** No hits found ******


4|SequenceR|25|16|IKREMAQITA

>sp|POK_THEKO|PANTOATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IKREMAQIT 9
+KRE A+IT
Sbjct: 63 VKREEAEIT 71




5|SequenceR|30|21|AAQSEIKREM

>sp|CDC6A_HALSA|ORC1-TYPE DNA replication protein 10|Halobacterium salinarum (strain ATCC

Query: 1 AAQSEIKRE 9
AA+SE++RE
Sbjct: 281 AARSELERE 289




6|SequenceR|35|26|LSLLRAAQSE

***** No hits found ******


7|SequenceR|40|31|GTRGELSLLR

>sp|RFCL_SACI6|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GTRGELSLL 9
GTRG+L LL
Sbjct: 97 GTRGKLILL 105


>sp|RFCL_SACI7|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GTRGELSLL 9
GTRG+L LL
Sbjct: 97 GTRGKLILL 105


>sp|RFCL_SACI4|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GTRGELSLL 9
GTRG+L LL
Sbjct: 97 GTRGKLILL 105


>sp|RFCL_SACI3|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.27)

Query: 1 GTRGELSLL 9
GTRG+L LL
Sbjct: 97 GTRGKLILL 105


>sp|RFCL_SACI2|REPLICATION factor C large subunit|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GTRGELSLL 9
GTRG+L LL
Sbjct: 97 GTRGKLILL 105


>sp|RFCL_SACI1|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GTRGELSLL 9
GTRG+L LL
Sbjct: 97 GTRGKLILL 105


>sp|RTCA_KORCO|RNA 3'-terminal phosphate cyclase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GTRGELSLLR 10
G R EL LLR
Sbjct: 146 GVRAELKLLR 155


>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 1 GTRGELS 7
GTRGEL+
Sbjct: 432 GTRGELT 438


>sp|RFCL_SACS2|REPLICATION factor C large subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 GTRGELSLL 9
GT+G+L LL
Sbjct: 97 GTKGKLILL 105


>sp|RTCA_PYRFU|RNA 3'-terminal phosphate cyclase|Pyrococcus furiosus (strain ATCC

Query: 1 GTRGELSLLR 10
G GE+ LLR
Sbjct: 144 GIEGEIKLLR 153




8|SequenceR|45|36|KKEAMGTRGE

>sp|PFDB_METBU|PREFOLDIN subunit beta|Methanococcoides burtonii (strain DSM 6242

Query: 2 KEAMGTRGE 10
K+AMGT+G+
Sbjct: 109 KQAMGTQGQ 117


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KKEAMGTRGE 10
+KE +GT GE
Sbjct: 850 RKEVIGTAGE 859




9|SequenceR|50|41|ECDALKKEAM

>sp|Y2010_ARCFU|UNCHARACTERIZED protein AF_2010|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ECDALKKEAM 10
+ +ALKKEA+
Sbjct: 88 DVEALKKEAI 97


>sp|Y053_NANEQ|UNCHARACTERIZED RNA methyltransferase NEQ053|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 ECDALKKEA 9
EC L KEA
Sbjct: 161 ECKMLSKEA 169


>sp|SYP_METM7|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 ECDALKKEAM 10
+CDA KEA+
Sbjct: 162 DCDAQIKEAL 171


>sp|SYP_METMP|PROLINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ECDALKKEAM 10
ECDA +EA+
Sbjct: 162 ECDAQIEEAL 171


>sp|NIFE_METBA|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanosarcina

Query: 2 CDALKK 7
CDALK+
Sbjct: 176 CDALKR 181




10|SequenceR|55|46|EVATKECDAL

>sp|KAE1_PYRAR|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum arsenaticum

Query: 3 ATKECDAL 10
ATK CD L
Sbjct: 119 ATKSCDPL 126


>sp|MPCT_HALS3|TRANSDUCER protein MpcT|Halobacterium salinarum (strain ATCC 29341

Query: 1 EVATKECDAL 10
EVA+++ DAL
Sbjct: 128 EVASRQADAL 137


>sp|FDHB_METTF|F420-DEPENDENT formate dehydrogenase subunit beta|Methanothermobacter

Query: 2 VATKECDAL 10
V TK CDA+
Sbjct: 98 VTTKPCDAM 106


>sp|GGGPS_METLZ|GERANYLGERANYLGLYCERYL phosphate synthase|Methanocorpusculum labreanum (strain ATCC

Query: 1 EVATKECDAL 10
E+A E DAL
Sbjct: 25 EIAASETDAL 34


>sp|GYAR_KORCO|GLYOXYLATE reductase|Korarchaeum cryptofilum (strain OPF8)

Query: 5 KECDAL 10
K+CDAL
Sbjct: 44 KDCDAL 49




11|SequenceR|60|51|LQNGFEVATK

>sp|KTHY_METS3|PROBABLE thymidylate kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 QNGFEVAT 9
QNGF+V T
Sbjct: 26 QNGFDVET 33


>sp|FAU1_SULAC|PROBABLE ribonuclease FAU-1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LQNGFEVATK 10
L+NGFE+ +
Sbjct: 18 LKNGFEIVQQ 27


>sp|HIS1_IGNH4|ATP phosphoribosyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LQNGFEVATK 10
L GF +ATK
Sbjct: 108 LPKGFRIATK 117


>sp|COFC_METHJ|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LQNGFEVATK 10
+ +GFE+A K
Sbjct: 196 ISHGFEIAMK 205


>sp|RADB_METMP|DNA repair and recombination protein|Methanococcus maripaludis (strain

Query: 1 LQNGFEVATK 10
LQNG E+ K
Sbjct: 204 LQNGLEIINK 213


>sp|RADB_METMI|DNA repair and recombination protein|Methanococcus maripaludis

Query: 1 LQNGFEVATK 10
LQNG E+ K
Sbjct: 204 LQNGLEIINK 213


>sp|CCA_HALMA|CCA-ADDING enzyme|Haloarcula marismortui (strain ATCC 43049

Query: 1 LQNGFEV 7
L+NG+EV
Sbjct: 435 LENGYEV 441


>sp|WECC_META3|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LQNGFEVA 8
LQN FEV+
Sbjct: 343 LQNDFEVS 350


>sp|RADB_METM7|DNA repair and recombination protein|Methanococcus maripaludis (strain

Query: 1 LQNGFEVATK 10
LQNG E+ K
Sbjct: 204 LQNGLEIINK 213


>sp|PELO_SACI3|PROTEIN pelota homolog|Saccharolobus islandicus (strain M.16.27)

Query: 2 QNGFEVATK 10
QN EVAT+
Sbjct: 168 QNALEVATE 176


>sp|PELO_SACI6|PROTEIN pelota homolog|Saccharolobus islandicus (strain M.16.4 /

Query: 2 QNGFEVATK 10
QN EVAT+
Sbjct: 168 QNALEVATE 176


>sp|PELO_SACI4|PROTEIN pelota homolog|Saccharolobus islandicus (strain M.14.25 /

Query: 2 QNGFEVATK 10
QN EVAT+
Sbjct: 168 QNALEVATE 176


>sp|PELO_SACI7|PROTEIN pelota homolog|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 QNGFEVATK 10
QN EVAT+
Sbjct: 168 QNALEVATE 176


>sp|PELO_SACI2|PROTEIN pelota homolog|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 QNGFEVATK 10
QN EVAT+
Sbjct: 168 QNALEVATE 176


>sp|PELO_SACI1|PROTEIN pelota homolog|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 QNGFEVATK 10
QN EVAT+
Sbjct: 168 QNALEVATE 176


>sp|FAU1_SULTO|PROBABLE ribonuclease FAU-1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LQNGFEV 7
L NGFE+
Sbjct: 18 LDNGFEI 24


>sp|CBID_METVS|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LQNGFE 6
+QNGFE
Sbjct: 204 IQNGFE 209


>sp|HIS1_META3|ATP phosphoribosyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 LQNGFEVATK 10
L+NG ++AT+
Sbjct: 110 LKNGMKIATE 119


>sp|ASPD_ARCFU|L-ASPARTATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QNGFEVA 8
+NGFE+A
Sbjct: 21 RNGFEIA 27


>sp|RL11_HYPBU|LARGE ribosomal subunit protein uL11|Hyperthermus butylicus (strain DSM

Query: 3 NGFEVATK 10
GFEVA K
Sbjct: 47 KGFEVAVK 54


>sp|HIS1_THEON|ATP phosphoribosyltransferase|Thermococcus onnurineus (strain NA1)

Query: 3 NGFEVATK 10
+GF +ATK
Sbjct: 104 DGFRIATK 111


>sp|Y760_METJA|UNCHARACTERIZED protein MJ0760|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LQNGFEVA 8
L+ GFE+A
Sbjct: 249 LEEGFEIA 256


>sp|ILVC_UNCAG|KETOL-ACID reductoisomerase (NAD(+))|Uncultured archaeon GZfos26G2

Query: 1 LQNGFEV 7
++NGFEV
Sbjct: 211 MRNGFEV 217


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QNGFEV 7
QNGFE+
Sbjct: 1128 QNGFEI 1133


>sp|RS3_ARCFU|SMALL ribosomal subunit protein uS3|Archaeoglobus fulgidus (strain ATCC

Query: 1 LQNGFEVATK 10
+Q GF++A K
Sbjct: 161 VQKGFDIAIK 170




12|SequenceR|65|56|AWKGELQNGF

>sp|SEPS_METLZ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 AWKGEL 6
AWKGEL
Sbjct: 395 AWKGEL 400


>sp|TRM1_SULTO|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfurisphaera tokodaii

Query: 1 AWKGELQN 8
AW GEL N
Sbjct: 274 AWTGELWN 281


>sp|RL18_ARCFU|LARGE ribosomal subunit protein uL18|Archaeoglobus fulgidus (strain

Query: 1 AWKGELQN 8
WKG+L N
Sbjct: 73 GWKGDLNN 80


>sp|RL18_SULTO|LARGE ribosomal subunit protein uL18|Sulfurisphaera tokodaii (strain

Query: 1 AWKGELQN 8
WKG+L N
Sbjct: 72 GWKGDLNN 79


>sp|EF2_SACS2|ELONGATION factor 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 WKGELQN 8
WKG+L N
Sbjct: 273 WKGDLDN 279


>sp|EF2_SACI7|ELONGATION factor 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 WKGELQN 8
WKG+L N
Sbjct: 273 WKGDLDN 279


>sp|EF2_SACI6|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.4 /

Query: 2 WKGELQN 8
WKG+L N
Sbjct: 273 WKGDLDN 279


>sp|EF2_SACI4|ELONGATION factor 2|Saccharolobus islandicus (strain M.14.25 /

Query: 2 WKGELQN 8
WKG+L N
Sbjct: 273 WKGDLDN 279


>sp|EF2_SACI3|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 WKGELQN 8
WKG+L N
Sbjct: 273 WKGDLDN 279


>sp|EF2_SACI2|ELONGATION factor 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 WKGELQN 8
WKG+L N
Sbjct: 273 WKGDLDN 279


>sp|EF2_SACI1|ELONGATION factor 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 WKGELQN 8
WKG+L N
Sbjct: 273 WKGDLDN 279


>sp|EF2_METS5|ELONGATION factor 2|Metallosphaera sedula (strain ATCC 51363

Query: 2 WKGELQN 8
WKG+L N
Sbjct: 273 WKGDLDN 279


>sp|TRM1_METS3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanobrevibacter smithii

Query: 2 WKGELQN 8
W GE+QN
Sbjct: 282 WLGEIQN 288


>sp|SEPS_METMJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 AWKGEL 6
AWKGE+
Sbjct: 395 AWKGEI 400


>sp|GSA_METAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocella arvoryzae (strain DSM 22066

Query: 2 WKGELQNG 9
WK LQNG
Sbjct: 382 WKHMLQNG 389


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 WKGELQNGF 10
WKGE+ N
Sbjct: 480 WKGEIGNAL 488


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 2 WKGELQNGF 10
W G ++ GF
Sbjct: 174 WSGTIEKGF 182


>sp|TOP6B_THESM|TYPE 2 DNA topoisomerase 6|Thermococcus sibiricus (strain DSM 12597

Query: 1 AWKGELQNGF 10
A+ GEL +GF
Sbjct: 406 AFGGELSSGF 415


>sp|SEPS_METTP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 AWKGEL 6
AW+GEL
Sbjct: 405 AWEGEL 410


>sp|EF2_NANEQ|ELONGATION factor 2|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 WKGELQNG 9
WK +QNG
Sbjct: 191 WKVSVQNG 198


>sp|AGL11_HALVD|LOW-SALT glycan biosynthesis nucleotidyltransferase Agl11|Haloferax volcanii

Query: 1 AWKGELQ 7
+W+GEL+
Sbjct: 189 SWRGELE 195


>sp|TOP6B_THEON|TYPE 2 DNA topoisomerase 6|Thermococcus onnurineus (strain NA1)

Query: 1 AWKGELQNGF 10
A+ GE+ +GF
Sbjct: 402 AYGGEISSGF 411


>sp|CYSC_AERPE|PROBABLE adenylyl-sulfate kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 AWKGELQN 8
A KGEL+N
Sbjct: 135 ALKGELEN 142


>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 WKGELQN 8
WKG+L++
Sbjct: 271 WKGDLES 277


>sp|IF2P_THESM|PROBABLE translation initiation factor IF-2|Thermococcus sibiricus (strain

Query: 2 WKGELQ 7
WKGE++
Sbjct: 64 WKGEIK 69


>sp|IF2P_THEON|PROBABLE translation initiation factor IF-2|Thermococcus onnurineus

Query: 2 WKGELQ 7
WKGE++
Sbjct: 64 WKGEIK 69


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 2 WKGELQ 7
WKGE++
Sbjct: 611 WKGEIK 616


>sp|EF2_THEVO|ELONGATION factor 2|Thermoplasma volcanium (strain ATCC 51530

Query: 2 WKGELQ 7
WKG+L+
Sbjct: 271 WKGDLE 276


>sp|CYAS_METBU|CYSTEATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 WKGELQNG 9
W GE NG
Sbjct: 275 WTGEQTNG 282


>sp|SYR_PYRAB|ARGININE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 AWKGELQ 7
WKGE++
Sbjct: 23 GWKGEIE 29




13|SequenceR|70|61|LTGLVAWKGE

>sp|Y145_ARCFU|UNCHARACTERIZED protein AF_0145|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LTGLVAWK 8
LTGL+ WK
Sbjct: 22 LTGLIDWK 29


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 1 LTGLVAWKG 9
L GL+ WKG
Sbjct: 819 LLGLIKWKG 827


>sp|SEPS_METMJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 GLVAWKGE 10
AWKGE
Sbjct: 392 AFTAWKGE 399


>sp|FLPA_THESM|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus sibiricus (strain

Query: 4 LVAWKGE 10
+V WKGE
Sbjct: 39 IVKWKGE 45


>sp|Y838_METJA|UNCHARACTERIZED protein MJ0838|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 AWKGE 10
AWKGE
Sbjct: 85 AWKGE 89


>sp|SEPS_METLZ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 6 AWKGE 10
AWKGE
Sbjct: 395 AWKGE 399


>sp|FLAB1_THEKO|FLAGELLIN B1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 TGLVAWK 8
+GL AWK
Sbjct: 158 SGLAAWK 164


>sp|TRUB_METMA|PROBABLE tRNA pseudouridine synthase B|Methanosarcina mazei (strain ATCC

Query: 1 LTGLVAWKGE 10
LTGL KGE
Sbjct: 281 LTGLFTLKGE 290


>sp|DPOL_PYRGL|DNA polymerase|Pyrococcus glycovorans

Query: 2 TGLVAW 7
TGL AW
Sbjct: 764 TGLTAW 769


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 2 TGLVAW 7
TGL AW
Sbjct: 1301 TGLTAW 1306


>sp|RS9_METKA|SMALL ribosomal subunit protein uS9|Methanopyrus kandleri (strain AV19

Query: 3 GLVAWKGE 10
GLV W G+
Sbjct: 86 GLVEWTGD 93




14|SequenceR|75|66|GYEQLLTGLV

>sp|MT872_AERPE|DNA (cytosine-5-)-methyltransferase M.ApeKI|Aeropyrum pernix (strain

Query: 1 GYEQLLTGLV 10
GYE + TG+V
Sbjct: 181 GYEIVFTGIV 190


>sp|Y787_METJA|UNCHARACTERIZED protein MJ0787|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GYEQLLTGL 9
GY+ L+TG+
Sbjct: 238 GYDDLITGI 246


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GYEQLL 6
GYEQLL
Sbjct: 287 GYEQLL 292


>sp|Y778_AERPE|PUTATIVE HTH-type transcriptional regulatory protein|Aeropyrum pernix

Query: 1 GYEQLLTGLV 10
G E LLTG+V
Sbjct: 91 GREDLLTGVV 100


>sp|AATC_HALLT|A-TYPE ATP synthase subunit C|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 YEQLLTGL 9
YE+LL+GL
Sbjct: 186 YERLLSGL 193




15|SequenceR|80|71|RRQLLGYEQL

>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain DSM

Query: 1 RRQLLGYEQL 10
R LLG+EQL
Sbjct: 402 RDGLLGFEQL 411


>sp|MPTA_METJA|GTP cyclohydrolase MptA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RRQLLGYE 8
RR+LL YE
Sbjct: 306 RRELLSYE 313


>sp|MTXX_METAC|PUTATIVE methyltransferase mtx subunit X|Methanosarcina acetivorans

Query: 1 RRQLLGYEQL 10
R Q+LGY Q+
Sbjct: 36 RAQVLGYAQV 45


>sp|Y3242_HALS3|UPF0284 protein OE_3242F|Halobacterium salinarum (strain ATCC 29341

Query: 2 RQLLGYEQL 10
R+L+G+E L
Sbjct: 74 RELVGFESL 82


>sp|Y1572_HALSA|UPF0284 protein VNG_1572C|Halobacterium salinarum (strain ATCC 700922

Query: 2 RQLLGYEQL 10
R+L+G+E L
Sbjct: 74 RELVGFESL 82


>sp|SYR_SULAC|ARGININE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 LLGYEQL 10
LLGYE+L
Sbjct: 403 LLGYERL 409


>sp|CS1F2_THETK|CRISPR-ASSOCIATED endonuclease Cas1/endonuclease Cas2 fusion|Thermoproteus tenax

Query: 1 RRQLLGYEQ 9
RR+L GY Q
Sbjct: 88 RRRLRGYSQ 96




16|SequenceR|85|76|EVNELRRQLL

>sp|RIBL_METVS|FAD synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EVNELRRQLL 10
++NEL+RQLL
Sbjct: 102 QINELKRQLL 111


>sp|HPPA2_METMA|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Methanosarcina mazei (strain

Query: 2 VNELRRQL 9
VNE+RRQ
Sbjct: 521 VNEVRRQF 528


>sp|HPPA2_METAC|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Methanosarcina acetivorans

Query: 2 VNELRRQL 9
VNE+RRQ
Sbjct: 521 VNEVRRQF 528


>sp|GSA_NATPD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VNELRRQL 9
VNEL RQL
Sbjct: 323 VNELGRQL 330


>sp|COAD_METKA|PHOSPHOPANTETHEINE adenylyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 EVNELRRQ 8
E+NELRR+
Sbjct: 111 EINELRRK 118


>sp|GLYA_PICTO|SERINE hydroxymethyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 2 VNELRRQLL 10
VNE+RR+ L
Sbjct: 399 VNEIRRRAL 407


>sp|GLYA_METS5|SERINE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 1 EVNELRRQL 9
++NE+RR++
Sbjct: 393 DINEMRRKV 401


>sp|Y428_SACS2|UNCHARACTERIZED protein SSO0428|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VNELRRQLL 10
VNE+ RQLL
Sbjct: 99 VNEVIRQLL 107




17|SequenceR|90|81|NRLLNEVNEL

>sp|YHMF_METFE|UNCHARACTERIZED 32.2 kDa protein in|Methanothermus fervidus

Query: 1 NRLLNEVNEL 10
N +LNE+N+L
Sbjct: 196 NMVLNEINKL 205


>sp|Y583_METTM|PUTATIVE ABC transporter ATP-binding protein|Methanothermobacter

Query: 2 RLLNEVNE 9
RLL+E+NE
Sbjct: 180 RLLHELNE 187


>sp|Y1389_METJA|UNCHARACTERIZED protein MJ1389|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NRLLNEVNEL 10
NR +NE+NE+
Sbjct: 6 NRKVNEINEI 15


>sp|Y593_PYRFU|UPF0282 protein PF0593|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NRLLNEVN 8
NR++NE N
Sbjct: 230 NRIINETN 237


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 1 NRLLNEVNE 9
NR+LNE +E
Sbjct: 236 NRVLNEDSE 244


>sp|PFDA_METS3|PREFOLDIN subunit alpha|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 NRLLNEVN 8
N+LLNE+N
Sbjct: 8 NQLLNEIN 15


>sp|HCP_METJA|HYDROXYLAMINE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LNEVNEL 10
LN+VNEL
Sbjct: 466 LNDVNEL 472


>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 RLLNEVNE 9
RLLNE+ E
Sbjct: 776 RLLNEIEE 783


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 RLLNEVNE 9
RLLNE+ E
Sbjct: 776 RLLNEIEE 783


>sp|KDGA_PICTO|2-DEHYDRO-3-DEOXY-D-GLUCONATE/2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE aldolase|Picrophilus torridus (strain ATCC 700027

Query: 4 LNEVNEL 10
+NEVNEL
Sbjct: 72 INEVNEL 78


>sp|SYP_META3|PROLINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 NRLLNEVNEL 10
+ LLNE+N L
Sbjct: 366 DNLLNELNTL 375


>sp|HCP_METVS|HYDROXYLAMINE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 4 LNEVNEL 10
LN+VNEL
Sbjct: 470 LNDVNEL 476




18|SequenceR|95|86|IWFNRNRLLN

>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 WFNRNRLL 9
W+NR RL+
Sbjct: 590 WYNRYRLM 597


>sp|TOP6B_PYRAE|TYPE 2 DNA topoisomerase 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 WFNRNRLL 9
WF RNR L
Sbjct: 12 WFRRNREL 19


>sp|SYR_META3|ARGININE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 IWFNRNRLLN 10
++F N+LLN
Sbjct: 193 VYFKANQLLN 202


>sp|Y359_METJA|UNCHARACTERIZED protein MJ0359|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IWF---NRNRLL 9
IW+ NRNRLL
Sbjct: 54 IWYKEKNRNRLL 65


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IWFNRNRL 8
+W NR++L
Sbjct: 279 LWVNRHKL 286




19|SequenceR|100|91|PPLRLIWFNR

>sp|ACDG_METJA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanocaldococcus

Query: 1 PPLRLIWF 8
PP++ +WF
Sbjct: 65 PPVKEVWF 72


>sp|KDPA_HALSA|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 1 PPLRLIWFNR 10
PP L WF R
Sbjct: 42 PPGYLSWFER 51


>sp|KDPA_HALS3|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 1 PPLRLIWFNR 10
PP L WF R
Sbjct: 42 PPGYLSWFER 51


>sp|CARA_METKA|CARBAMOYL phosphate synthase small chain|Methanopyrus kandleri (strain AV19 /

Query: 2 PLRLIWFN 9
PLR+ W N
Sbjct: 308 PLRVRWVN 315


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 PLRLIWFN 9
PL+LI FN
Sbjct: 409 PLKLIGFN 416


>sp|COBD_THEAC|PROBABLE cobalamin biosynthesis protein CobD|Thermoplasma acidophilum

Query: 2 PLRLIWF 8
P RL WF
Sbjct: 203 PARLSWF 209


>sp|HTPX1_SULAC|PROTEASE HtpX homolog 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 LIWFNR 10
++WFNR
Sbjct: 204 VLWFNR 209




20|SequenceR|105|96|EGKSGPPLRL

>sp|TRM1_METTH|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanothermobacter

Query: 2 GKSGPPLR 9
G+S PPLR
Sbjct: 331 GRSAPPLR 338


>sp|ACYP_ARCFU|ACYLPHOSPHATASE fulgidus (strain ATCC 49558

Query: 3 KSGPPL 8
KSGPPL
Sbjct: 61 KSGPPL 66


>sp|CAPPA_PYRFU|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GKSGPPLR 9
G GPPLR
Sbjct: 252 GVGGPPLR 259


>sp|Y843_ARCFU|UNCHARACTERIZED protein AF_0843|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KSGPPLRL 10
KSG PLR+
Sbjct: 87 KSGKPLRV 94


>sp|Y104_SACS2|UNCHARACTERIZED aminotransferase SSO0104|Saccharolobus solfataricus (strain ATCC

Query: 1 EGKSGPPLR 9
EG+S PP++
Sbjct: 218 EGESPPPIK 226


>sp|Y2246_METAC|UNCHARACTERIZED serpin-like protein MA_2246|Methanosarcina acetivorans (strain ATCC

Query: 1 EGKSGPPLRL 10
EG+ GP RL
Sbjct: 199 EGEIGPDTRL 208


>sp|RL31_HALSA|LARGE ribosomal subunit protein eL31|Halobacterium salinarum (strain

Query: 1 EGKSGPPLRL 10
EG + PP +L
Sbjct: 62 EGNNNPPRKL 71


>sp|RL31_HALS3|LARGE ribosomal subunit protein eL31|Halobacterium salinarum (strain

Query: 1 EGKSGPPLRL 10
EG + PP +L
Sbjct: 62 EGNNNPPRKL 71




21|SequenceR|110|101|WEKPSEGKSG

>sp|KTHY_AERPE|PUTATIVE thymidylate kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 WEKPSEGKSG 10
W++P+EG G
Sbjct: 35 WKEPTEGPVG 44


>sp|RTCB_NANEQ|TRNA-SPLICING ligase RtcB|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 WEKPSEGK 8
WE P EGK
Sbjct: 13 WEIPKEGK 20


>sp|PELO_PYRAB|PROTEIN pelota homolog|Pyrococcus abyssi (strain GE5 /

Query: 2 EKPSEGK 8
EKP EGK
Sbjct: 6 EKPKEGK 12


>sp|PELO_THEKO|PROTEIN pelota homolog|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 EKPSEGK 8
EKP EGK
Sbjct: 6 EKPKEGK 12


>sp|FAU1_METKA|PROBABLE ribonuclease FAU-1|Methanopyrus kandleri (strain AV19 /

Query: 1 WEKPSEGKSG 10
W +EGKSG
Sbjct: 200 WRTAAEGKSG 209


>sp|PELO_PYRHO|PROTEIN pelota homolog|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EKPSEGK 8
EKP EGK
Sbjct: 6 EKPKEGK 12


>sp|HDRE_METBF|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina barkeri

Query: 3 KPSEGKSG 10
+P EGK G
Sbjct: 54 EPQEGKKG 61


>sp|RL15E_HALSA|LARGE ribosomal subunit protein eL15|Halobacterium salinarum (strain

Query: 1 WEKPSEGK 8
WE P +GK
Sbjct: 13 WEDPDDGK 20


>sp|RL15E_HALS3|LARGE ribosomal subunit protein eL15|Halobacterium salinarum (strain

Query: 1 WEKPSEGK 8
WE P +GK
Sbjct: 13 WEDPDDGK 20


>sp|COOS1_METAC|CARBON monoxide dehydrogenase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 WEKPSEGKSG 10
++K SEGK+G
Sbjct: 109 FKKMSEGKAG 118


>sp|PELO_PYRFU|PROTEIN pelota homolog|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EKPSEGK 8
EKP EGK
Sbjct: 6 EKPKEGK 12


>sp|RL15E_META3|LARGE ribosomal subunit protein eL15|Methanococcus aeolicus (strain

Query: 1 WEKPSE 6
W+KPSE
Sbjct: 11 WKKPSE 16


>sp|RS8E_PYRIL|SMALL ribosomal subunit protein eS8|Pyrobaculum islandicum (strain DSM

Query: 2 EKPSEGKSG 10
+KPS GK G
Sbjct: 13 KKPSGGKKG 21




22|SequenceR|115|106|DELKGWEKPS

>sp|AROC_CALMQ|CHORISMATE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 DELKGWEKP 9
D K WEKP
Sbjct: 173 DVAKSWEKP 181


>sp|EF1A_METAC|ELONGATION factor 1-alpha|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DELKGWEKPS 10
DELK EKPS
Sbjct: 212 DELKEPEKPS 221


>sp|PGP_HALSA|PHOSPHOGLYCOLATE phosphatase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DELKGWEKP 9
D L+GW+ P
Sbjct: 29 DVLRGWDGP 37


>sp|PGP_HALS3|PHOSPHOGLYCOLATE phosphatase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DELKGWEKP 9
D L+GW+ P
Sbjct: 29 DVLRGWDGP 37


>sp|MDH_PICTO|MALATE dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 1 DELKGWEK 8
DEL+ W+K
Sbjct: 297 DELEAWKK 304


>sp|HIS4_METMJ|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanoculleus marisnigri (strain

Query: 3 LKGWEKPS 10
++GWE+P+
Sbjct: 137 IEGWERPA 144


>sp|RS8_CALMQ|SMALL ribosomal subunit protein uS8|Caldivirga maquilingensis (strain

Query: 1 DELKGWEK 8
DEL+ WE+
Sbjct: 84 DELQKWEE 91


>sp|RS8_METB6|SMALL ribosomal subunit protein uS8|Methanoregula boonei (strain DSM

Query: 1 DELKGWEK 8
DE++ WEK
Sbjct: 84 DEMEYWEK 91


>sp|HIS4_METHJ|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanospirillum hungatei JF-1

Query: 5 GWEKPS 10
GWE+P+
Sbjct: 139 GWERPA 144


>sp|LYSY_NITMS|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 DELKGWEKP 9
D+ GWE P
Sbjct: 110 DKWYGWEHP 118


>sp|AROC_PYRCJ|CHORISMATE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 DELKGWEKP 9
D K WEKP
Sbjct: 171 DVRKSWEKP 179


>sp|RNZ_METMA|RIBONUCLEASE Z|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DELKGWEKPS 10
DE+ GW + S
Sbjct: 233 DEMAGWAEES 242


>sp|H669_METJA|PROBABLE ATP-dependent RNA helicase MJ0669|Methanocaldococcus jannaschii

Query: 4 KGWEKPS 10
KG+EKP+
Sbjct: 24 KGFEKPT 30


>sp|SYE_HALSA|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ELKGWEKP 9
EL+GW+ P
Sbjct: 361 ELEGWDDP 368


>sp|SYE_HALS3|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 ELKGWEKP 9
EL+GW+ P
Sbjct: 361 ELEGWDDP 368


>sp|SYI_HALWD|ISOLEUCINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DELKGWE 7
DEL GWE
Sbjct: 282 DELTGWE 288


>sp|RS8_HALWD|SMALL ribosomal subunit protein uS8|Haloquadratum walsbyi (strain DSM

Query: 1 DELKGWEK 8
DE + WEK
Sbjct: 84 DEFERWEK 91


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 ELKGWEKPS 10
EL+GW K S
Sbjct: 79 ELEGWYKKS 87


>sp|RS8_HALLT|SMALL ribosomal subunit protein uS8|Halorubrum lacusprofundi (strain

Query: 1 DELKGWEK 8
DE + WEK
Sbjct: 84 DEFEKWEK 91


>sp|GCST_PYRAB|PROBABLE aminomethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 DELKGWEKP 9
+E GWE P
Sbjct: 19 EEFAGWEMP 27


>sp|GCST_NATPD|PROBABLE aminomethyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ELKGWEKP 9
E GWE P
Sbjct: 21 EFGGWEMP 28


>sp|GCST_PYRHO|PROBABLE aminomethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DELKGWEKP 9
+E GWE P
Sbjct: 19 EEFAGWEMP 27


>sp|RS8_NATPD|SMALL ribosomal subunit protein uS8|Natronomonas pharaonis (strain ATCC

Query: 1 DELKGWEK 8
DE + WEK
Sbjct: 84 DEFEKWEK 91


>sp|RS8_HALMA|SMALL ribosomal subunit protein uS8|Haloarcula marismortui (strain ATCC

Query: 1 DELKGWEK 8
DE + WEK
Sbjct: 84 DEFEKWEK 91


>sp|KDPB_THEVO|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma volcanium (strain ATCC

Query: 1 DELKGWE 7
D+LKG+E
Sbjct: 357 DDLKGYE 363


>sp|HEM3_PYRCJ|PROBABLE porphobilinogen deaminase|Pyrobaculum calidifontis (strain DSM

Query: 3 LKGWEKP 9
L GWE P
Sbjct: 174 LYGWEAP 180


>sp|GCST_PYRFU|PROBABLE aminomethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DELKGWEKP 9
+E GWE P
Sbjct: 19 EEFAGWEMP 27


>sp|G1PDH_AERPE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Aeropyrum pernix (strain ATCC 700893

Query: 3 LKGWEKP 9
LKG++KP
Sbjct: 135 LKGFDKP 141


>sp|GCST_THEON|PROBABLE aminomethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 1 DELKGWEKP 9
+E GWE P
Sbjct: 19 EEFAGWEMP 27


>sp|GCST_THEKO|PROBABLE aminomethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 DELKGWEKP 9
+E GWE P
Sbjct: 19 EEFAGWEMP 27


>sp|GCST_THEGJ|PROBABLE aminomethyltransferase|Thermococcus gammatolerans (strain DSM

Query: 1 DELKGWEKP 9
+E GWE P
Sbjct: 19 EEFAGWEMP 27


>sp|COFG_METS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 ELKGWEKPS 10
E++ WE+P+
Sbjct: 225 EMENWEEPT 233


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 ELKGWEKP 9
E GW KP
Sbjct: 309 EYNGWNKP 316


>sp|SAT_HYPBU|SULFATE adenylyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 DELKGWEKP 9
+ L GW+KP
Sbjct: 217 NPLVGWKKP 225


>sp|SAT_STAMF|SULFATE adenylyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 3 LKGWEKP 9
L GW+KP
Sbjct: 219 LIGWKKP 225


>sp|PURA_METBU|ADENYLOSUCCINATE synthetase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DELKGW 6
DEL+GW
Sbjct: 371 DELEGW 376


>sp|TOP6B_METAC|TYPE 2 DNA topoisomerase 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DELKGWEKP 9
DE++ W +P
Sbjct: 163 DEVRDWFRP 171


>sp|SAT_IGNH4|SULFATE adenylyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 DELKGWEKP 9
+ L GW+KP
Sbjct: 217 NPLVGWKKP 225


>sp|R15PI_THEKO|RIBOSE 1,5-bisphosphate isomerase|Thermococcus kodakarensis (strain ATCC

Query: 1 DELKGWEK 8
DELK W K
Sbjct: 263 DELKTWPK 270


>sp|SYE_PYRNV|GLUTAMATE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 GWEKP 9
GWE+P
Sbjct: 326 GWEQP 330


>sp|TOP6B_METMA|TYPE 2 DNA topoisomerase 6|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DELKGWEKP 9
DE++ W +P
Sbjct: 163 DEVRDWFRP 171




23|SequenceR|120|111|LEKQWDELKG

>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 1 LEKQWDEL 8
LE+ WDEL
Sbjct: 599 LERTWDEL 606


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 LEKQWD 6
LEK+WD
Sbjct: 436 LEKEWD 441


>sp|ASPGP_PYRAB|PLANT-TYPE L-asparaginase|Pyrococcus abyssi (strain GE5 /

Query: 3 KQWDELK 9
KQW ELK
Sbjct: 141 KQWQELK 147


>sp|ASPGP_PYRFU|PLANT-TYPE L-asparaginase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KQWDELK 9
KQW+EL+
Sbjct: 141 KQWEELR 147


>sp|ASPGP_THEKO|PLANT-TYPE L-asparaginase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 KQWDELK 9
KQW+EL+
Sbjct: 141 KQWEELR 147


>sp|Y695_METJA|UNCHARACTERIZED protein MJ0695|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 QWDELKG 10
+WDE KG
Sbjct: 57 KWDEFKG 63


>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 EKQWDELKG 10
E+QW L+G
Sbjct: 405 ERQWGVLEG 413


>sp|Y1633_ARCFU|UNCHARACTERIZED protein AF_1633|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EKQWDELKG 10
EK W ++KG
Sbjct: 146 EKFWSDVKG 154


>sp|Y1053_ARCFU|UNCHARACTERIZED protein AF_1053|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LEKQWDELKG 10
LEK+ D LKG
Sbjct: 27 LEKELDVLKG 36


>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 3 KQWDEL 8
K WDEL
Sbjct: 140 KAWDEL 145


>sp|Y2058_ARCFU|UNCHARACTERIZED protein AF_2058|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KQWDELKG 10
K +DELKG
Sbjct: 56 KIYDELKG 63


>sp|Y2149_ARCFU|UPF0111 protein AF_2149|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LEKQWDELKG 10
LE+Q D +KG
Sbjct: 153 LEEQIDSMKG 162


>sp|CARA_SACS2|CARBAMOYL phosphate synthase small chain|Saccharolobus solfataricus (strain

Query: 1 LEKQWDEL 8
LEK++DE+
Sbjct: 155 LEKKYDEI 162


>sp|RHMD_CALMQ|PUTATIVE L-rhamnonate dehydratase|Caldivirga maquilingensis (strain ATCC

Query: 1 LEKQWDEL 8
+EK WD++
Sbjct: 108 VEKTWDQM 115


>sp|SYP_PYRAE|PROLINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 EKQWDELKG 10
++ W+ELKG
Sbjct: 401 KRAWEELKG 409


>sp|CAPPA_SACS2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EKQWDELK 9
EK+WD K
Sbjct: 406 EKEWDIFK 413


>sp|CAPPA_SACI7|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 EKQWDELK 9
EK+WD K
Sbjct: 406 EKEWDIFK 413


>sp|CAPPA_SACI6|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 EKQWDELK 9
EK+WD K
Sbjct: 406 EKEWDIFK 413


>sp|CAPPA_SACI4|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 EKQWDELK 9
EK+WD K
Sbjct: 406 EKEWDIFK 413


>sp|CAPPA_SACI3|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 EKQWDELK 9
EK+WD K
Sbjct: 406 EKEWDIFK 413


>sp|CAPPA_SACI1|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 EKQWDELK 9
EK+WD K
Sbjct: 406 EKEWDIFK 413


>sp|CAPPA_SACI2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 EKQWDELK 9
EK+WD K
Sbjct: 406 EKEWDIFK 413


>sp|DHE3_PYRAB|GLUTAMATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 5 WDELKG 10
WD+LKG
Sbjct: 208 WDDLKG 213


>sp|CARA_SULTO|CARBAMOYL phosphate synthase small chain|Sulfurisphaera tokodaii (strain DSM

Query: 1 LEKQWDEL 8
LEK++DE+
Sbjct: 158 LEKKYDEI 165


>sp|COABC_THEKO|COENZYME A biosynthesis bifunctional protein|Thermococcus kodakarensis

Query: 2 EKQWDELK 9
E+ WDE++
Sbjct: 393 ERLWDEIE 400


>sp|DHE3_THEKO|GLUTAMATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 WDELKG 10
WD+LKG
Sbjct: 208 WDDLKG 213


>sp|PGK2_PYRHO|2-PHOSPHOGLYCERATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 WDELKG 10
W ELKG
Sbjct: 149 WKELKG 154


>sp|MT872_AERPE|DNA (cytosine-5-)-methyltransferase M.ApeKI|Aeropyrum pernix (strain

Query: 1 LEKQWDELK 9
L +WDE+K
Sbjct: 159 LSIRWDEIK 167


>sp|PURT_METVS|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus vannielii

Query: 1 LEKQWDELK 9
+EK WD K
Sbjct: 172 IEKSWDYAK 180


>sp|MTD_METB6|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanoregula boonei

Query: 2 EKQWDELK 9
+K+W+E+K
Sbjct: 99 KKEWEEVK 106




24|SequenceR|125|116|MVHKYLEKQW

>sp|DCD_METS5|DCTP deaminase|Metallosphaera sedula (strain ATCC 51363

Query: 5 YLEKQW 10
YLEK+W
Sbjct: 11 YLEKKW 16


>sp|NAOX_METJA|NADH oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MVHKYLEKQ 9
+V KYLEK+
Sbjct: 196 IVQKYLEKE 204


>sp|Y1068_METJA|UNCHARACTERIZED membrane protein MJ1068|Methanocaldococcus jannaschii (strain ATCC

Query: 3 HKYLEKQW 10
H++L K+W
Sbjct: 436 HQFLNKKW 443


>sp|Y1126_METTH|UNCHARACTERIZED protein MTH_1126|Methanothermobacter thermautotrophicus (strain

Query: 1 MVHKYLE 7
+VHKY+E
Sbjct: 326 LVHKYIE 332


>sp|CDC62_SACS2|ORC1-TYPE DNA replication protein 2|Saccharolobus solfataricus (strain ATCC

Query: 1 MVHKYLEKQ 9
M+H+YL+++
Sbjct: 136 MIHEYLDRR 144


>sp|Y202_METJA|UNCHARACTERIZED protein MJ0202|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MVHKYLEK 8
+VH+YL+K
Sbjct: 68 VVHRYLKK 75


>sp|TMCA_PYRAB|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus abyssi (strain GE5 /

Query: 1 MVHKYLEKQ 9
++H+YLEK+
Sbjct: 389 ILHRYLEKE 397


>sp|DCD_SACS2|DCTP deaminase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 YLEKQW 10
YLEK W
Sbjct: 11 YLEKSW 16


>sp|TMCA_PYRFU|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus furiosus (strain ATCC

Query: 1 MVHKYLEKQ 9
++H+YLEK+
Sbjct: 389 ILHRYLEKE 397


>sp|DP2S_ARCFU|DNA polymerase II small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 4 KYLEKQW 10
++LEK+W
Sbjct: 241 EFLEKEW 247


>sp|RS3_SULAC|SMALL ribosomal subunit protein uS3|Sulfolobus acidocaldarius (strain

Query: 1 MVHKYLEKQW 10
MV +YL KQ+
Sbjct: 17 MVDEYLAKQF 26


>sp|PGK2_METTH|2-PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 VHKYLEKQ 9
+H+Y+E Q
Sbjct: 258 IHRYIENQ 265


>sp|RS3_SULTO|SMALL ribosomal subunit protein uS3|Sulfurisphaera tokodaii (strain DSM

Query: 1 MVHKYLEKQW 10
MV +YL KQ+
Sbjct: 17 MVDEYLAKQF 26


>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 2 VHKYLEKQ 9
+HKYL K+
Sbjct: 460 LHKYLRKK 467


>sp|QOXM_SULAC|QUINOL oxidase subunit 1/3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 MVHKYLEKQW 10
+V YLE+ W
Sbjct: 204 LVFAYLERLW 213


>sp|ORNAT_THEKO|ORNITHINE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VHKYLEK 8
+HKYLE+
Sbjct: 352 LHKYLEE 358


>sp|DCD_SULTO|DCTP deaminase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 YLEKQW 10
YLEK W
Sbjct: 11 YLEKGW 16


>sp|DCD_SULAC|DCTP deaminase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 YLEKQW 10
YLEK W
Sbjct: 11 YLEKGW 16


>sp|DCD_ACIAM|DCTP deaminase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 5 YLEKQW 10
YLEK W
Sbjct: 11 YLEKGW 16


>sp|TRUB_METMA|PROBABLE tRNA pseudouridine synthase B|Methanosarcina mazei (strain ATCC

Query: 2 VHKYLEK 8
+H+Y+EK
Sbjct: 36 IHEYIEK 42


>sp|Y1307_METJA|UNCHARACTERIZED protein MJ1307|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HKYLEK 8
HK+LEK
Sbjct: 169 HKFLEK 174


>sp|DNAG_METM6|DNA primase DnaG|Methanococcus maripaludis (strain C6 /

Query: 1 MVHKYLEK 8
+ HKY EK
Sbjct: 294 ITHKYYEK 301


>sp|SUDHA_PYRFU|SULFIDE dehydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VHKYLEKQ 9
+H+YL K+
Sbjct: 466 IHQYLSKE 473


>sp|DNAG_METM5|DNA primase DnaG|Methanococcus maripaludis (strain C5 /

Query: 1 MVHKYLEK 8
+ HKY EK
Sbjct: 294 VTHKYYEK 301


>sp|RL10_METBF|LARGE ribosomal subunit protein uL10|Methanosarcina barkeri (strain

Query: 2 VHKYLEKQ 9
++KYL+KQ
Sbjct: 80 MNKYLDKQ 87


>sp|Y3016_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 VHKYLEK 8
+HK+L+K
Sbjct: 486 IHKFLDK 492


>sp|TMCA_THES3|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus sp. (strain AM4)

Query: 1 MVHKYLEKQ 9
++HKYL K+
Sbjct: 389 ILHKYLNKE 397


>sp|COFG_METM5|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C5 /

Query: 4 KYLEKQW 10
KY+ K+W
Sbjct: 335 KYISKEW 341


>sp|ELP3_METIM|TRNA uridine(34) acetyltransferase|Methanocaldococcus infernus (strain

Query: 1 MVHKYLEKQ 9
+V+KY+EK+
Sbjct: 372 LVYKYMEKK 380


>sp|COFG_METM7|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C7 /

Query: 4 KYLEKQW 10
KY+ K+W
Sbjct: 335 KYITKEW 341




25|SequenceR|130|121|EYNGRMVHKY

>sp|Y145_ARCFU|UNCHARACTERIZED protein AF_0145|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EYNGRMVH 8
EY G++VH
Sbjct: 83 EYGGKLVH 90


>sp|URE1_SULTO|UREASE subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 NGRMVHKY 10
NGR +H Y
Sbjct: 264 NGRTIHAY 271


>sp|DTDA_METPE|D-AMINOACYL-TRNA deacylase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 EYNGRMVHK 9
E +GR++H+
Sbjct: 41 EIDGRLIHQ 49


>sp|LYSY_PYRHO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 EYNGRMVHK 9
EY G+ VHK
Sbjct: 36 EYAGKKVHK 44


>sp|FRHA_METVO|COENZYME F420 hydrogenase subunit alpha|Methanococcus voltae

Query: 1 EYNGRMV 7
EYNGR++
Sbjct: 256 EYNGRLM 262


>sp|AATC_METST|A-TYPE ATP synthase subunit C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 NGRMVHKY 10
N RM+H Y
Sbjct: 233 NTRMLHSY 240


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 YNGRMVH 8
YNG M+H
Sbjct: 793 YNGTMLH 799


>sp|RL22_PICTO|LARGE ribosomal subunit protein uL22|Picrophilus torridus (strain ATCC

Query: 4 GRMVHKY 10
GRM+ KY
Sbjct: 115 GRMIKKY 121


>sp|TRUD_PYRIL|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum islandicum (strain DSM

Query: 1 EYNGRMVH 8
E NG++VH
Sbjct: 301 EINGQVVH 308


>sp|RL22_THEVO|LARGE ribosomal subunit protein uL22|Thermoplasma volcanium (strain ATCC

Query: 4 GRMVHKY 10
GRM+ KY
Sbjct: 115 GRMIKKY 121


>sp|RL22_THEAC|LARGE ribosomal subunit protein uL22|Thermoplasma acidophilum (strain

Query: 4 GRMVHKY 10
GRM+ KY
Sbjct: 118 GRMIKKY 124




26|SequenceR|135|126|LSVLTEYNGR

>sp|PDXT_PICTO|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Picrophilus torridus (strain

Query: 2 SVLTEYNGR 10
SVL EYNG+
Sbjct: 146 SVLGEYNGK 154


>sp|PUR5_METVS|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 SVLTEYNGR 10
+VL EYNG+
Sbjct: 336 TVLVEYNGK 344


>sp|Y484_METBF|UPF0292 protein Mbar_A0484|Methanosarcina barkeri (strain Fusaro /

Query: 1 LSVLTEYNGR 10
LS L+EY+GR
Sbjct: 18 LSELSEYSGR 27


>sp|TRPD_METM7|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 2 SVLTEYNGR 10
S +TEYNG+
Sbjct: 224 SKITEYNGK 232


>sp|SYFA_METAR|PHENYLALANINE--TRNA ligase alpha subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 LSVLTEYNGR 10
L V TEY GR
Sbjct: 219 LPVQTEYGGR 228


>sp|TRPD_METVS|ANTHRANILATE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 2 SVLTEYNGR 10
S +TEYNG+
Sbjct: 224 SKITEYNGK 232


>sp|MOBB_METJA|PUTATIVE molybdopterin-guanine dinucleotide biosynthesis

Query: 1 LSVLTEYN 8
LSVL++YN
Sbjct: 80 LSVLSDYN 87


>sp|GATA_HALMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Haloarcula marismortui (strain ATCC

Query: 4 LTEYNG 9
+TEYNG
Sbjct: 1 MTEYNG 6


>sp|PUR2_PYRHO|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VLTEYNGR 10
VL EYN R
Sbjct: 283 VLIEYNAR 290


>sp|RNP2_THEKO|RIBONUCLEASE P protein component 2|Thermococcus kodakarensis (strain ATCC

Query: 1 LSVLTEYNG 9
L++LTE NG
Sbjct: 84 LTMLTEING 92


>sp|SRP19_METTH|SIGNAL recognition particle 19 kDa|Methanothermobacter

Query: 3 VLTEYNGR 10
V+ EYNG+
Sbjct: 66 VVVEYNGK 73


>sp|PUR2_THEGJ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 SVLTEYNGR 10
VL EYN R
Sbjct: 282 PVLIEYNAR 290


>sp|TRPD_METMP|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 2 SVLTEYNGR 10
S +TEY+G+
Sbjct: 224 SKITEYDGK 232


>sp|TRPD_METM5|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 2 SVLTEYNGR 10
S +TEY+G+
Sbjct: 224 SKITEYDGK 232


>sp|TRPD_METM6|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 2 SVLTEYNGR 10
S +TEY+G+
Sbjct: 224 SKITEYDGK 232




27|SequenceR|140|131|SIAYDLSVLT

>sp|PURE_METTH|PROBABLE N5-carboxyaminoimidazole ribonucleotide mutase|Methanothermobacter

Query: 2 IAYDLSVLT 10
I+YDL+V++
Sbjct: 216 ISYDLNVIS 224




28|SequenceR|145|136|LVEPKSIAYD

>sp|PSA_METTH|PROTEASOME subunit alpha|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LVEPKSI 7
LVEPKSI
Sbjct: 59 LVEPKSI 65


>sp|GLNA_METVO|GLUTAMINE synthetase|Methanococcus voltae

Query: 3 EPKSIAY 9
EPK+IAY
Sbjct: 29 EPKNIAY 35


>sp|SYE_THEAC|GLUTAMATE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LVEPKSIAY 9
L+EPKS Y
Sbjct: 514 LIEPKSSGY 522


>sp|GLNA_METMP|GLUTAMINE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 3 EPKSIAY 9
EPK+IAY
Sbjct: 29 EPKNIAY 35


>sp|Y1281_METJA|UNCHARACTERIZED protein MJ1281|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EPKSIAYD 10
EPK++ YD
Sbjct: 992 EPKNVYYD 999


>sp|SYG_THEKO|GLYCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 EP-KSIAYD 10
EP KSIAYD
Sbjct: 485 EPLKSIAYD 493




29|SequenceR|150|141|QEIQSLVEPK

***** No hits found ******


30|SequenceR|155|146|CPEKGQEIQS

>sp|Y748_METKA|UPF0212 protein MK0748|Methanopyrus kandleri (strain AV19 /

Query: 1 CPEKGQEIQ 9
CPE G EI+
Sbjct: 57 CPECGNEIE 65


>sp|DHOM_METJA|HOMOSERINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PEKGQEIQS 10
PEKG+E+ S
Sbjct: 70 PEKGREMSS 78


>sp|TRUD_METKA|PROBABLE tRNA pseudouridine synthase D|Methanopyrus kandleri (strain AV19

Query: 1 CPEKGQEIQ 9
CPE GQ+++
Sbjct: 30 CPECGQDLR 38


>sp|RNJL_SACS2|RNASE aCSPSF2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PEKGQEI 8
PE GQEI
Sbjct: 484 PENGQEI 490


>sp|Y1289_ARCFU|PUTATIVE GTPase AF_1289|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PEKGQEIQ 9
PE G EIQ
Sbjct: 175 PETGDEIQ 182


>sp|TGT_ARCFU|PUTATIVE queuine tRNA-ribosyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 2 PEKGQEIQS 10
P+K EIQS
Sbjct: 158 PKKSMEIQS 166


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 CPEKGQEIQ 9
CPE G E+
Sbjct: 501 CPECGSEMH 509


>sp|RS21_HALVD|SMALL ribosomal subunit protein aS21|Haloferax volcanii (strain ATCC

Query: 1 CPEKGQEI 8
CP+ GQEI
Sbjct: 29 CPDCGQEI 36


>sp|TFE_METS3|TRANSCRIPTION factor E|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 CPEKGQEIQ 9
CPE G+E++
Sbjct: 134 CPECGEELE 142


>sp|DAPB_METM7|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain C7 /

Query: 2 PEKGQEI 8
P+KGQ+I
Sbjct: 39 PKKGQDI 45


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 CPEKGQEIQ 9
CP+ G+E++
Sbjct: 501 CPDCGEEMR 509


>sp|SIHH_METMP|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 1 CPEKGQEI 8
C EKG E+
Sbjct: 87 CVEKGMEV 94




31|SequenceR|160|151|PRRWNCPEKG

>sp|Y1230_METJA|UNCHARACTERIZED protein MJ1230|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RRWNCPEKG 10
+RW CP+ G
Sbjct: 7 KRWKCPKCG 15


>sp|UBIX_AERPE|FLAVIN prenyltransferase UbiX|Aeropyrum pernix (strain ATCC 700893

Query: 2 RRWNCPEKG 10
RRW PE+G
Sbjct: 188 RRWRGPEEG 196


>sp|CHEB_METBU|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Methanococcoides

Query: 4 WNCPEK 9
WNCP++
Sbjct: 151 WNCPDQ 156


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 1 PRRWNCPEK 9
PRR N PEK
Sbjct: 581 PRRVNLPEK 589


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 PRRWNCPEK 9
PRR N PE+
Sbjct: 612 PRRVNLPER 620


>sp|Y671_SACI1|UPF0282 protein YN1551_0671|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 PRRWNCP 7
PRR+N P
Sbjct: 37 PRRYNLP 43


>sp|Y3251_SACS2|UPF0282 protein SSO3251|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PRRWNCP 7
PRR+N P
Sbjct: 37 PRRYNLP 43


>sp|Y2281_SACI2|UPF0282 protein LS215_2281|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PRRWNCP 7
PRR+N P
Sbjct: 37 PRRYNLP 43


>sp|Y2245_SACI7|UPF0282 protein YG5714_2245|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 PRRWNCP 7
PRR+N P
Sbjct: 37 PRRYNLP 43


>sp|Y2198_SACI3|UPF0282 protein M1627_2198|Saccharolobus islandicus (strain M.16.27)

Query: 1 PRRWNCP 7
PRR+N P
Sbjct: 37 PRRYNLP 43


>sp|Y2122_SACI6|UPF0282 protein M164_2122|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PRRWNCP 7
PRR+N P
Sbjct: 37 PRRYNLP 43


>sp|Y2116_SACI4|UPF0282 protein M1425_2116|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PRRWNCP 7
PRR+N P
Sbjct: 37 PRRYNLP 43


>sp|KHSE_METMP|HOMOSERINE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 4 WNCP 7
WNCP
Sbjct: 282 WNCP 285


>sp|KHSE_METM7|HOMOSERINE kinase|Methanococcus maripaludis (strain C7 /

Query: 4 WNCP 7
WNCP
Sbjct: 282 WNCP 285


>sp|KHSE_METM6|HOMOSERINE kinase|Methanococcus maripaludis (strain C6 /

Query: 4 WNCP 7
WNCP
Sbjct: 282 WNCP 285


>sp|KHSE_METM5|HOMOSERINE kinase|Methanococcus maripaludis (strain C5 /

Query: 4 WNCP 7
WNCP
Sbjct: 282 WNCP 285


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 PRRWNCPEKG 10
PR W E+G
Sbjct: 934 PRSWESSEEG 943


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PRRWNCPEKG 10
PR W E+G
Sbjct: 934 PRSWESSEEG 943


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RRWNCPE 8
R WN PE
Sbjct: 220 RYWNTPE 226


>sp|Y1942_ARCFU|UNCHARACTERIZED protein AF_1942|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PRRWNC 6
P WNC
Sbjct: 130 PENWNC 135


>sp|Y932_METKA|UNCHARACTERIZED protein MK0932|Methanopyrus kandleri (strain AV19 /

Query: 3 RWNCPE 8
RW CPE
Sbjct: 209 RWECPE 214


>sp|RFRNP_METTH|RNA-FREE ribonuclease P|Methanothermobacter thermautotrophicus (strain

Query: 3 RWNCPEK 9
R++CPE+
Sbjct: 66 RYDCPEE 72


>sp|RS4E_METBF|SMALL ribosomal subunit protein eS4|Methanosarcina barkeri (strain

Query: 1 PRRWNCPEKG 10
PR W +KG
Sbjct: 10 PRSWKAGKKG 19


>sp|RIBL_METMP|FAD synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 RRWNCPE 8
RRW C E
Sbjct: 141 RRWCCKE 147


>sp|RIBL_METM7|FAD synthase|Methanococcus maripaludis (strain C7 /

Query: 2 RRWNCPE 8
RRW C E
Sbjct: 141 RRWCCKE 147


>sp|RIBL_METM6|FAD synthase|Methanococcus maripaludis (strain C6 /

Query: 2 RRWNCPE 8
RRW C E
Sbjct: 141 RRWCCKE 147


>sp|ARLY_PYRCJ|ARGININOSUCCINATE lyase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 RWNCPEKG 10
RWN P G
Sbjct: 252 RWNSPAIG 259


>sp|RIBL_METM5|FAD synthase|Methanococcus maripaludis (strain C5 /

Query: 2 RRWNCPE 8
RRW C E
Sbjct: 141 RRWCCKE 147


>sp|GCS2_HALLT|GLUTAMATE--CYSTEINE ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 RWNCP 7
RW+CP
Sbjct: 156 RWHCP 160


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 1 PRRWNCPEK 9
PR N PEK
Sbjct: 615 PRSVNLPEK 623


>sp|RS4E_METJA|SMALL ribosomal subunit protein eS4|Methanocaldococcus jannaschii

Query: 1 PRRWNCPEK 9
P RW P K
Sbjct: 16 PVRWELPRK 24


>sp|ARLY_PYRAE|ARGININOSUCCINATE lyase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 RWNCPEKG 10
RWN P G
Sbjct: 252 RWNSPVVG 259


>sp|Y597_METJA|UNCHARACTERIZED protein MJ0597|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RRWNCPEK 9
R W CP K
Sbjct: 149 RDWICPGK 156


>sp|TGT_ARCFU|PUTATIVE queuine tRNA-ribosyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 4 WNCPEKG 10
+NC EKG
Sbjct: 283 FNCTEKG 289


>sp|Y1056_PYRHO|PROBABLE S-adenosyl-L-methionine-binding protein PH1056|Pyrococcus

Query: 1 PRRWNCPEK 9
P R++CP++
Sbjct: 118 PERYDCPKE 126


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 4 WNCPEKG 10
W+ PEKG
Sbjct: 58 WHEPEKG 64


>sp|RFCL_IGNH4|REPLICATION factor C large subunit|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 RWNCPEK 9
RW+ PEK
Sbjct: 333 RWSYPEK 339


>sp|RS4E_METHJ|SMALL ribosomal subunit protein eS4|Methanospirillum hungatei JF-1

Query: 1 PRRWNCPEK 9
P+ W P K
Sbjct: 11 PKSWGIPRK 19




32|SequenceR|165|156|PIKPGPRRWN

>sp|Y042_THEAC|UPF0215 protein Ta0042|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PIKPGPRR 8
P +PGPRR
Sbjct: 16 PFEPGPRR 23


>sp|RS6E_METBU|SMALL ribosomal subunit protein eS6|Methanococcoides burtonii (strain

Query: 1 PIKPGPRR 8
P PGPRR
Sbjct: 64 PTLPGPRR 71


>sp|THIC_HALSA|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 KPGPRRWN 10
KPG R W+
Sbjct: 357 KPGARDWD 364


>sp|THIC_HALS3|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 KPGPRRWN 10
KPG R W+
Sbjct: 357 KPGARDWD 364


>sp|APGM1_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanothermobacter thermautotrophicus

Query: 1 PIKPGPR 7
PIKPG R
Sbjct: 47 PIKPGVR 53


>sp|OFOA2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 2 IKPGPRR 8
+ PGPRR
Sbjct: 229 LPPGPRR 235


>sp|RS6E_METMA|SMALL ribosomal subunit protein eS6|Methanosarcina mazei (strain ATCC

Query: 1 PIKPGPRR 8
P PGPRR
Sbjct: 65 PDLPGPRR 72


>sp|SURE_METKA|5'-NUCLEOTIDASE SurE|Methanopyrus kandleri (strain AV19 /

Query: 4 PGPRRWN 10
P P RWN
Sbjct: 173 PDPDRWN 179


>sp|RS6E_METAC|SMALL ribosomal subunit protein eS6|Methanosarcina acetivorans (strain

Query: 1 PIKPGPRR 8
P PGPRR
Sbjct: 65 PDLPGPRR 72


>sp|TOP6B_PYRFU|TYPE 2 DNA topoisomerase 6|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PGPRRW 9
P P+RW
Sbjct: 164 PNPKRW 169


>sp|SUCC_PYRIL|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum islandicum (strain

Query: 3 KPGPRRW 9
KPG ++W
Sbjct: 162 KPGSQQW 168


>sp|PRIS_METHJ|DNA primase small subunit PriS|Methanospirillum hungatei JF-1 (strain

Query: 3 KPGPRRWN 10
KPG R W+
Sbjct: 189 KPGRRGWH 196


>sp|THIL_METKA|THIAMINE-MONOPHOSPHATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 3 KPGPRRW 9
+P PR W
Sbjct: 7 RPSPRTW 13


>sp|RS32_METJA|SMALL ribosomal subunit protein eS32|Methanocaldococcus jannaschii

Query: 1 PIKPGPRRWN 10
PIK RRW
Sbjct: 3 PIKRSSRRWK 12


>sp|SURE_CALMQ|5'-NUCLEOTIDASE SurE|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 PGPRRWN 10
P P RW+
Sbjct: 178 PSPSRWS 184




33|SequenceR|170|161|DVPVDPIKPG

>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DVPVDPIK 8
D+P+DPIK
Sbjct: 468 DLPIDPIK 475


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 VPVDPIKPG 10
VP+ P+KPG
Sbjct: 652 VPLRPVKPG 660


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DVPVDPIKPG 10
D+P+DP K G
Sbjct: 425 DLPIDPTKTG 434


>sp|SYN_THEAC|ASPARAGINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VPVDPIKPG 10
+PVDP PG
Sbjct: 329 MPVDPENPG 337


>sp|TREH1_SULAC|TREHALASE 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DVPVDPIKP 9
DVP D IKP
Sbjct: 144 DVPTDEIKP 152


>sp|HMGCS_PYRCJ|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 DVPVDPIKPG 10
++P+D +KPG
Sbjct: 251 NIPLDKVKPG 260


>sp|TPIS_THEKO|TRIOSEPHOSPHATE isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 VDPIKPG 10
+DPIKPG
Sbjct: 67 IDPIKPG 73


>sp|TPIS_PYRWO|TRIOSEPHOSPHATE isomerase|Pyrococcus woesei

Query: 4 VDPIKPG 10
+DPIKPG
Sbjct: 67 IDPIKPG 73


>sp|TPIS_PYRFU|TRIOSEPHOSPHATE isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 VDPIKPG 10
+DPIKPG
Sbjct: 67 IDPIKPG 73


>sp|TOP6A_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 DVPVDPIK 8
D+P DP+K
Sbjct: 283 DLPTDPLK 290


>sp|TPIS_PYRHO|TRIOSEPHOSPHATE isomerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 VDPIKPG 10
+DPIKPG
Sbjct: 66 IDPIKPG 72


>sp|TPIS_PYRAB|TRIOSEPHOSPHATE isomerase|Pyrococcus abyssi (strain GE5 /

Query: 4 VDPIKPG 10
+DPIKPG
Sbjct: 66 IDPIKPG 72


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DVPVDPIK 8
D+P+DP K
Sbjct: 426 DLPIDPTK 433


>sp|PUR5_METBU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcoides burtonii (strain DSM 6242

Query: 5 DPIKPG 10
DPI+PG
Sbjct: 264 DPIEPG 269


>sp|HMGCS_PYRIL|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DVPVDPIKPG 10
++P++ +KPG
Sbjct: 251 NIPIEKVKPG 260


>sp|HMGCS_PYRAR|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 DVPVDPIKPG 10
++P++ IKPG
Sbjct: 250 NIPMEKIKPG 259


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 2 VPVDPIKPG 10
+P+ P+KPG
Sbjct: 450 LPITPLKPG 458


>sp|APGM1_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanothermobacter thermautotrophicus

Query: 4 VDPIKPG 10
+DPIKPG
Sbjct: 45 MDPIKPG 51


>sp|RPO6_METJA|DNA-DIRECTED RNA polymerase subunit Rpo6|Methanocaldococcus jannaschii (strain

Query: 2 VPVDPIKP 9
VP+ PI+P
Sbjct: 47 VPLKPIRP 54


>sp|MCRY_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 DVPVDPIKP 9
DVP++ I P
Sbjct: 21 DVPLEAISP 29


>sp|HMGCS_PYRAE|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DVPVDPIKPG 10
++P++ +KPG
Sbjct: 251 NIPMEKVKPG 260


>sp|MCRB_METVO|METHYL-COENZYME M reductase subunit beta|Methanococcus voltae

Query: 1 DVPVDPIKP 9
DVP++ I P
Sbjct: 21 DVPLEAISP 29


>sp|APGM_PYRHO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 DPIKPG 10
DPIKPG
Sbjct: 50 DPIKPG 55


>sp|HMGCS_PYRNV|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 DVPVDPIKPG 10
++P++ +KPG
Sbjct: 251 NIPMEKVKPG 260


>sp|APGM_THEGJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermococcus gammatolerans (strain DSM

Query: 5 DPIKPG 10
DPIKPG
Sbjct: 49 DPIKPG 54


>sp|APGM_PYRAB|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus abyssi (strain GE5 /

Query: 5 DPIKPG 10
DPIKPG
Sbjct: 48 DPIKPG 53


>sp|APGM_THEKO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermococcus kodakarensis (strain ATCC

Query: 5 DPIKPG 10
DPIKPG
Sbjct: 49 DPIKPG 54


>sp|APGM_PYRFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 DPIKPG 10
DPIKPG
Sbjct: 49 DPIKPG 54


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DVPVDP 6
D+PVDP
Sbjct: 420 DLPVDP 425


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DVPVDPIK 8
D+P+DP K
Sbjct: 442 DLPLDPTK 449


>sp|TRPE_THEKO|ANTHRANILATE synthase component 1|Thermococcus kodakarensis (strain ATCC

Query: 3 PVDPIK 8
PVDP+K
Sbjct: 8 PVDPLK 13


>sp|FEN_PYRCJ|FLAP endonuclease 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 PVDPIK 8
PVDP+K
Sbjct: 277 PVDPLK 282


>sp|APGM_METKA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanopyrus kandleri (strain AV19 /

Query: 4 VDPIKPG 10
+DPI+PG
Sbjct: 52 LDPIRPG 58


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 3 PVDPIKP 9
P DPI+P
Sbjct: 897 PEDPIEP 903


>sp|FRHB_METTH|COENZYME F420 hydrogenase subunit beta|Methanothermobacter

Query: 3 PVDPIKPG 10
P++ +KPG
Sbjct: 243 PIEEVKPG 250


>sp|FRHB_METBF|COENZYME F420 hydrogenase subunit beta|Methanosarcina barkeri (strain Fusaro

Query: 3 PVDPIKPG 10
P++ +KPG
Sbjct: 248 PIEEVKPG 255


>sp|NADC_ARCFU|PROBABLE nicotinate-nucleotide pyrophosphorylase

Query: 5 DPIKPG 10
+PIKPG
Sbjct: 51 EPIKPG 56


>sp|THI4_AERPE|THIAMINE thiazole synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DVPVDPIKPG 10
+VP + +KPG
Sbjct: 91 EVPYEAVKPG 100


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 2 VPVDPIKPG 10
VP IKPG
Sbjct: 254 VPAGMIKPG 262


>sp|DCDB_METMJ|DCTP deaminase, dUMP-forming|Methanoculleus marisnigri (strain ATCC

Query: 2 VPVDPIKPG 10
+ VDP +PG
Sbjct: 17 IRVDPFEPG 25


>sp|CSG_HALSA|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 700922

Query: 1 DVPVDPIKPG 10
DVP+ ++PG
Sbjct: 741 DVPLSNVEPG 750


>sp|CSG_HALS3|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 29341

Query: 1 DVPVDPIKPG 10
DVP+ ++PG
Sbjct: 741 DVPLSNVEPG 750


>sp|TPIS_METS3|TRIOSEPHOSPHATE isomerase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 VDPIKPG 10
+DPI PG
Sbjct: 64 IDPITPG 70


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 1 DVPVDPIKP 9
DVPV KP
Sbjct: 754 DVPVTHFKP 762


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DVPVDP 6
D+PVDP
Sbjct: 425 DLPVDP 430


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DVPVDP 6
D+PVDP
Sbjct: 425 DLPVDP 430


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 DVPVDP 6
D+PVDP
Sbjct: 425 DLPVDP 430


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DVPVDP 6
D+PVDP
Sbjct: 425 DLPVDP 430


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 VPVDPIKPG 10
+PVDP + G
Sbjct: 429 LPVDPTRDG 437


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 2 VPVDPIKP 9
VPVD I+P
Sbjct: 391 VPVDSIEP 398


>sp|PUR2_METM6|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C6 /

Query: 3 PVDPIK 8
P+DP+K
Sbjct: 350 PIDPVK 355


>sp|PUR2_METM7|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C7 /

Query: 3 PVDPIK 8
P+DP+K
Sbjct: 350 PIDPVK 355




34|SequenceR|175|166|SGPSPDVPVD

>sp|TIAS_CALMQ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Caldivirga maquilingensis

Query: 1 SGPSPDVPVD 10
S P P +P+D
Sbjct: 162 STPKPSIPID 171


>sp|ARLY_METHJ|ARGININOSUCCINATE lyase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GPSPDVPVD 10
GP+PD +D
Sbjct: 445 GPAPDAVLD 453


>sp|PUR7_THEVO|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PSPDVP 8
P PD+P
Sbjct: 263 PEPDIP 268


>sp|PTH_HALSA|PEPTIDYL-TRNA hydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GPSPDVPVD 10
GP+PD VD
Sbjct: 95 GPAPDADVD 103


>sp|PTH_HALS3|PEPTIDYL-TRNA hydrolase|Halobacterium salinarum (strain ATCC 29341

Query: 2 GPSPDVPVD 10
GP+PD VD
Sbjct: 95 GPAPDADVD 103


>sp|PYCA_ARCFU|PYRUVATE carboxylase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GPSPDV 7
GPSP+V
Sbjct: 104 GPSPEV 109


>sp|GATB_METKA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 3 PSPDVPV 9
P PD+PV
Sbjct: 253 PDPDIPV 259


>sp|YGY3_HALL2|UNCHARACTERIZED 50.6 kDa protein in|Haloferax lucentense (strain DSM 14919

Query: 1 SGPSPDVPVD 10
+GP P VP D
Sbjct: 298 AGPRPQVPGD 307


>sp|AOCD_METJA|ORNITHINE cyclodeaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GPSPDVPVD 10
GP PDV D
Sbjct: 321 GPLPDVITD 329


>sp|COOS2_METMA|CARBON monoxide dehydrogenase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PSPDVPV 9
P PD+PV
Sbjct: 546 PVPDLPV 552


>sp|CYAS_METAR|CYSTEATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 3 PSPDVPVD 10
P PDVP++
Sbjct: 403 PGPDVPME 410


>sp|AOCD_METMP|ORNITHINE cyclodeaminase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GPSPDVPVD 10
GP PDV D
Sbjct: 321 GPIPDVITD 329


>sp|PUR7_THEAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PSPDVP 8
P PD+P
Sbjct: 263 PEPDIP 268


>sp|PTH_PYRAE|PEPTIDYL-TRNA hydrolase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GPSPDVPVD 10
GP+PD VD
Sbjct: 102 GPAPDELVD 110


>sp|DNAG_METLZ|DNA primase DnaG|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 SPDVPVD 10
+PDVP D
Sbjct: 307 TPDVPAD 313




35|SequenceR|180|171|PVPPGSGPSP

>sp|RL1_THEAC|LARGE ribosomal subunit protein uL1|Thermoplasma acidophilum (strain ATCC

Query: 1 PVPPGSGPSP 10
P+PPG P+P
Sbjct: 132 PIPPGQDPAP 141


>sp|RL1_THEVO|LARGE ribosomal subunit protein uL1|Thermoplasma volcanium (strain ATCC

Query: 1 PVPPGSGPSP 10
P+PPG P P
Sbjct: 132 PIPPGQDPVP 141


>sp|RL1_PICTO|LARGE ribosomal subunit protein uL1|Picrophilus torridus (strain ATCC

Query: 1 PVPPGSGPS 9
PVPPG P+
Sbjct: 127 PVPPGQDPT 135


>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii (strain

Query: 3 PPGSGPS 9
PPGSG S
Sbjct: 292 PPGSGKS 298


>sp|RADB_METS3|DNA repair and recombination protein|Methanobrevibacter smithii

Query: 3 PPGSGPS 9
PPGSG S
Sbjct: 38 PPGSGKS 44


>sp|KCY_SULTO|CYTIDYLATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PPGSGPS 9
PPGSG S
Sbjct: 8 PPGSGKS 14


>sp|KCY_SULAC|CYTIDYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PPGSGPS 9
PPGSG S
Sbjct: 8 PPGSGKS 14


>sp|KCY_IGNH4|CYTIDYLATE kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 PPGSGPS 9
PPGSG S
Sbjct: 9 PPGSGKS 15


>sp|KCY_AERPE|CYTIDYLATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PPGSGPS 9
PPGSG S
Sbjct: 5 PPGSGKS 11


>sp|KAD_THESM|ADENYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 3 PPGSGPS 9
PPGSG S
Sbjct: 8 PPGSGKS 14


>sp|KCY_METTP|CYTIDYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 PPGSGPS 9
PPGSG S
Sbjct: 8 PPGSGTS 14


>sp|FOLD_PICTO|BIFUNCTIONAL protein FolD|Picrophilus torridus (strain ATCC 700027

Query: 1 PVPPGSGP 8
PVP G GP
Sbjct: 249 PVPGGVGP 256


>sp|FOLD_NITMS|BIFUNCTIONAL protein FolD|Nitrosopumilus maritimus (strain SCM1)

Query: 1 PVPPGSGP 8
PVP G GP
Sbjct: 258 PVPGGVGP 265


>sp|Y130_ARCFU|PROBABLE deacetylase AF_0130|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PVPPGSG 7
P+PPG+G
Sbjct: 212 PLPPGTG 218


>sp|KAD_THEON|ADENYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 3 PPGSGPS 9
PPGSG S
Sbjct: 8 PPGSGKS 14


>sp|KCY_HALSA|CYTIDYLATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 3 PPGSGPS 9
PPGSG S
Sbjct: 8 PPGSGKS 14


>sp|KCY_HALS3|CYTIDYLATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 3 PPGSGPS 9
PPGSG S
Sbjct: 8 PPGSGKS 14


>sp|CARB1_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 4 PGSGPSP 10
PG GPSP
Sbjct: 403 PGLGPSP 409


>sp|KCY_HALLT|CYTIDYLATE kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 PPGSGPS 9
PPGSG S
Sbjct: 8 PPGSGKS 14


>sp|TRM1_METBU|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcoides burtonii

Query: 1 PVPPGSGPSP 10
PVPP P P
Sbjct: 16 PVPPEGVPFP 25


>sp|Y093_METJA|UNCHARACTERIZED protein MJ0093|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PVPPG 5
P+PPG
Sbjct: 17 PIPPG 21


>sp|RFCL_PYRHO|REPLICATION factor C large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 51 PPGSGKT 57


>sp|RFCL_PYRFU|REPLICATION factor C large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 51 PPGSGKT 57


>sp|RFCL_PYRAB|REPLICATION factor C large subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 51 PPGSGKT 57


>sp|RFCL_METVS|REPLICATION factor C large subunit|Methanococcus vannielii (strain ATCC 35089

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 47 PPGSGKT 53


>sp|RADB_METTH|DNA repair and recombination protein|Methanothermobacter

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 38 PPGSGKT 44


>sp|RADB_METST|DNA repair and recombination protein|Methanosphaera stadtmanae

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 38 PPGSGKT 44


>sp|KCY_SACS2|CYTIDYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 8 PPGSGKT 14


>sp|KCY_SACI7|CYTIDYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 8 PPGSGKT 14


>sp|KCY_SACI6|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 8 PPGSGKT 14


>sp|KCY_SACI4|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 8 PPGSGKT 14


>sp|KCY_SACI3|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 8 PPGSGKT 14


>sp|KCY_SACI2|CYTIDYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 8 PPGSGKT 14


>sp|KCY_SACI1|CYTIDYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 8 PPGSGKT 14


>sp|KCY_DESA1|CYTIDYLATE kinase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 9 PPGSGKT 15


>sp|RFCL_THEPD|REPLICATION factor C large subunit|Thermofilum pendens (strain DSM 2475

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 55 PPGSGKT 61


>sp|KCY_METPE|CYTIDYLATE kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 8 PPGSGTT 14


>sp|KCY_METMJ|CYTIDYLATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 8 PPGSGTT 14


>sp|KCY_ARCFU|CYTIDYLATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 8 PPGSGTT 14


>sp|KAD_THEGJ|ADENYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 PPGSGPS 9
PPGSG S
Sbjct: 8 PPGSGKS 14


>sp|Y249_PYRAB|PUTATIVE GTPase PYRAB02490|Pyrococcus abyssi (strain GE5 /

Query: 3 PPGSGPS 9
PPG+G S
Sbjct: 53 PPGAGKS 59


>sp|KCY_HALWD|CYTIDYLATE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 PPGSGPS 9
PPG+G S
Sbjct: 8 PPGAGKS 14


>sp|KAD6_THEVO|PUTATIVE adenylate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PPGSGPS 9
PPG+G S
Sbjct: 10 PPGAGKS 16


>sp|FOLD_THEVO|BIFUNCTIONAL protein FolD|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PVPPGSGP 8
PVP G GP
Sbjct: 250 PVPGGVGP 257


>sp|FOLD_METBU|BIFUNCTIONAL protein FolD|Methanococcoides burtonii (strain DSM 6242

Query: 1 PVPPGSGP 8
PVP G GP
Sbjct: 261 PVPGGVGP 268


>sp|NTPTH_AERPE|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Aeropyrum pernix (strain ATCC 700893

Query: 3 PPGSGPS 9
PPGSG S
Sbjct: 25 PPGSGKS 31


>sp|KAD_THEKO|ADENYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PPGSGPS 9
PPGSG S
Sbjct: 8 PPGSGKS 14


>sp|Y274_PYRHO|PUTATIVE GTPase PH0274|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PPGSGPS 9
PPG+G S
Sbjct: 55 PPGAGKS 61


>sp|PSTK_METKA|L-SERYL-TRNA(SEC) kinase|Methanopyrus kandleri (strain AV19 /

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 9 PPGSGKT 15


>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 1 PVPPG 5
PVPPG
Sbjct: 39 PVPPG 43


>sp|FOLD_METAC|BIFUNCTIONAL protein FolD|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PVPPGSGP 8
PVP G GP
Sbjct: 265 PVPGGVGP 272


>sp|OTC_METTH|ORNITHINE carbamoyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 3 PPGSGPSP 10
PPG P P
Sbjct: 175 PPGYEPDP 182


>sp|KAD_PYRFU|ADENYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PPGSGPS 9
PPGSG S
Sbjct: 8 PPGSGKS 14


>sp|RFCL_METMP|REPLICATION factor C large subunit|Methanococcus maripaludis (strain DSM

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 47 PPGSGKT 53


>sp|RFCL_METM6|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C6 /

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 47 PPGSGKT 53


>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 PVPPG 5
PVPPG
Sbjct: 36 PVPPG 40


>sp|FOLD_THEAC|BIFUNCTIONAL protein FolD|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PVPPGSGP 8
PVP G GP
Sbjct: 248 PVPGGVGP 255


>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PVPPG 5
PVPPG
Sbjct: 36 PVPPG 40


>sp|LEUC_PYRHO|3-ISOPROPYLMALATE dehydratase large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VPPGSGP 8
+PPG GP
Sbjct: 316 LPPGCGP 322


>sp|RFCL_METM7|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C7 /

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 47 PPGSGKT 53


>sp|FOLD_METBF|BIFUNCTIONAL protein FolD|Methanosarcina barkeri (strain Fusaro /

Query: 1 PVPPGSGP 8
PVP G GP
Sbjct: 262 PVPGGVGP 269


>sp|FOLD_METMA|BIFUNCTIONAL protein FolD|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PVPPGSGP 8
PVP G GP
Sbjct: 262 PVPGGVGP 269


>sp|KAD_PYRAB|ADENYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 PPGSGPS 9
PPGSG S
Sbjct: 8 PPGSGKS 14


>sp|CDC6V_METTF|ORC1-TYPE DNA replication protein|Methanothermobacter thermautotrophicus

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 55 PPGSGKT 61


>sp|CDC6Z_METTF|ORC1-TYPE DNA replication protein|Methanothermobacter thermautotrophicus

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 55 PPGSGKT 61


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 VPPGSGPSP 10
VPP PSP
Sbjct: 408 VPPPGKPSP 416


>sp|LEUC2_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VPPGSGP 8
+PPG GP
Sbjct: 316 LPPGCGP 322


>sp|KAD_PYRHO|ADENYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PPGSGPS 9
PPGSG S
Sbjct: 8 PPGSGKS 14


>sp|GATD_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina barkeri (strain Fusaro /

Query: 4 PGSGP 8
PGSGP
Sbjct: 305 PGSGP 309


>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 47 PPGSGKT 53


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PVPPGSGPSP 10
P+ PG P+P
Sbjct: 516 PLSPGPLPAP 525


>sp|PPSA_METTH|PROBABLE phosphoenolpyruvate synthase|Methanothermobacter

Query: 1 PVPPG 5
PVPPG
Sbjct: 63 PVPPG 67


>sp|LEUC2_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 2 VPPGSGP 8
+PPG GP
Sbjct: 316 LPPGCGP 322


>sp|FOLD_METTP|BIFUNCTIONAL protein FolD|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PVPPGSGP 8
PVP G GP
Sbjct: 250 PVPGGVGP 257


>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 1 PVPPG 5
PVPPG
Sbjct: 41 PVPPG 45


>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 282 PPGSGKT 288


>sp|CS1F2_THETK|CRISPR-ASSOCIATED endonuclease Cas1/endonuclease Cas2 fusion|Thermoproteus tenax

Query: 1 PVPPGSG 7
PVPPG+G
Sbjct: 139 PVPPGAG 145


>sp|FOLD_CENSY|BIFUNCTIONAL protein FolD|Cenarchaeum symbiosum (strain A)

Query: 1 PVPPGSGP 8
PVP G GP
Sbjct: 253 PVPGGVGP 260


>sp|TRUD_METTH|PROBABLE tRNA pseudouridine synthase D|Methanothermobacter

Query: 3 PPGSGPS 9
P GSGP+
Sbjct: 35 PSGSGPN 41


>sp|TRM1_METLZ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocorpusculum

Query: 3 PPGSGP 8
PPGS P
Sbjct: 25 PPGSAP 30


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PVPPG 5
PVPPG
Sbjct: 36 PVPPG 40


>sp|FOLD1_HALMA|BIFUNCTIONAL protein FolD 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 PVPPGSGP 8
PVP G GP
Sbjct: 265 PVPGGVGP 272


>sp|TRM1_METHJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanospirillum hungatei

Query: 1 PVPPGSGP 8
P PPG+ P
Sbjct: 23 PFPPGTAP 30


>sp|FOLD_NATPD|BIFUNCTIONAL protein FolD|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PVPPGSGP 8
PVP G GP
Sbjct: 265 PVPGGVGP 272


>sp|FOLD_HALWD|BIFUNCTIONAL protein FolD|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PVPPGSGP 8
PVP G GP
Sbjct: 279 PVPGGVGP 286


>sp|FOLD_METPE|BIFUNCTIONAL protein FolD|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PVPPGSGP 8
PVP G GP
Sbjct: 250 PVPGGVGP 257


>sp|RAD25_HALSA|PUTATIVE DNA 3'-5' helicase Rad25|Halobacterium salinarum (strain ATCC

Query: 3 PPGSGPS 9
PPGSG +
Sbjct: 267 PPGSGKT 273




36|SequenceR|185|176|LLDPAPVPPG

>sp|Y903_METJA|UNCHARACTERIZED protein MJ0903|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LDPAPVPP 9
+DP P+PP
Sbjct: 399 IDPKPIPP 406


>sp|RL1_PICTO|LARGE ribosomal subunit protein uL1|Picrophilus torridus (strain ATCC

Query: 4 PAPVPPG 10
P PVPPG
Sbjct: 125 PRPVPPG 131


>sp|RL1_THEAC|LARGE ribosomal subunit protein uL1|Thermoplasma acidophilum (strain ATCC

Query: 4 PAPVPPG 10
P P+PPG
Sbjct: 130 PRPIPPG 136


>sp|SPCS_METJA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LLDPAPVPPG 10
L+DP P PG
Sbjct: 97 LIDPQPKAPG 106


>sp|BIOB_CENSY|BIOTIN synthase|Cenarchaeum symbiosum (strain A)

Query: 5 APVPPG 10
AP+PPG
Sbjct: 243 APLPPG 248


>sp|RL1_THEVO|LARGE ribosomal subunit protein uL1|Thermoplasma volcanium (strain ATCC

Query: 4 PAPVPPG 10
P P+PPG
Sbjct: 130 PRPIPPG 136


>sp|Y335_METJA|UNCHARACTERIZED protein MJ0335|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLDPAPVPP 9
+L APVPP
Sbjct: 224 ILASAPVPP 232


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 301 MLDPAILRPG 310


>sp|NDK_SACS2|NUCLEOSIDE diphosphate kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 DPAPVPPG 10
DP PPG
Sbjct: 94 DPKEAPPG 101


>sp|NDK_SACI7|NUCLEOSIDE diphosphate kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 DPAPVPPG 10
DP PPG
Sbjct: 94 DPKEAPPG 101


>sp|NDK_SACI6|NUCLEOSIDE diphosphate kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 DPAPVPPG 10
DP PPG
Sbjct: 94 DPKEAPPG 101


>sp|NDK_SACI4|NUCLEOSIDE diphosphate kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 DPAPVPPG 10
DP PPG
Sbjct: 94 DPKEAPPG 101


>sp|NDK_SACI3|NUCLEOSIDE diphosphate kinase|Saccharolobus islandicus (strain M.16.27)

Query: 3 DPAPVPPG 10
DP PPG
Sbjct: 94 DPKEAPPG 101


>sp|NDK_SACI2|NUCLEOSIDE diphosphate kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 DPAPVPPG 10
DP PPG
Sbjct: 94 DPKEAPPG 101


>sp|NDK_SACI1|NUCLEOSIDE diphosphate kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 DPAPVPPG 10
DP PPG
Sbjct: 94 DPKEAPPG 101


>sp|Y2028_ARCFU|UNCHARACTERIZED protein AF_2028|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DPAPVPPG 10
DPA +P G
Sbjct: 167 DPAKIPKG 174


>sp|HDRE_METBF|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina barkeri (strain

Query: 2 LDPAPVPPG 10
LDP+ PP
Sbjct: 217 LDPSVAPPA 225


>sp|NDK_SULTO|NUCLEOSIDE diphosphate kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 DPAPVPPG 10
DP PPG
Sbjct: 94 DPKEAPPG 101


>sp|HDRE_METAC|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina acetivorans

Query: 2 LDPAPVPPG 10
LDP PP
Sbjct: 218 LDPTTAPPA 226


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 302 ILDPALLRPG 311


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 330 ILDPALLRPG 339


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 299 ILDPAILRPG 308


>sp|THIC1_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LLDPAPVPPG 10
+LD +P+P G
Sbjct: 110 ILDLSPIPVG 119


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 299 ILDPAILRPG 308


>sp|HDRE_METMA|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina mazei (strain

Query: 2 LDPAPVPPG 10
LDP PP
Sbjct: 213 LDPVTAPPA 221


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 299 ILDPAILRPG 308


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 299 ILDPAILRPG 308


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 299 ILDPAILRPG 308


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 310 VLDPAILRPG 319


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 321 ILDPAILRPG 330


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LLDPAPVPPG 10
L+DPA + PG
Sbjct: 290 LIDPAVLRPG 299


>sp|RL1_METAR|LARGE ribosomal subunit protein uL1|Methanocella arvoryzae (strain DSM

Query: 4 PAPVPP 9
PAP+PP
Sbjct: 131 PAPLPP 136


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 285 ILDPALLRPG 294


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 310 VLDPAILRPG 319


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 285 ILDPALLRPG 294


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 285 ILDPALLRPG 294


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 285 ILDPALLRPG 294


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 285 ILDPALLRPG 294


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 285 ILDPALLRPG 294


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 285 ILDPALLRPG 294


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 292 ILDPAILRPG 301


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 291 ILDPALLRPG 300


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 288 ILDPALLRPG 297


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 310 ILDPALLRPG 319


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 285 ILDPALLRPG 294


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 288 ILDPALLRPG 297


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 289 ILDPALLRPG 298


>sp|RL10_ARCFU|LARGE ribosomal subunit protein uL10|Archaeoglobus fulgidus (strain ATCC

Query: 4 PAPVPPG 10
P P+PPG
Sbjct: 126 PTPIPPG 132


>sp|AMPD_METTH|ANHYDROMEVALONATE phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 2 LDPAPVPPG 10
LDPA +P G
Sbjct: 389 LDPAALPDG 397


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 290 ILDPALLRPG 299


>sp|SPCS_METKA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanopyrus kandleri (strain AV19 /

Query: 1 LLDPAPVPPG 10
L+DP P PG
Sbjct: 93 LVDPQPKAPG 102


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 289 ILDPALLRPG 298


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LLDPAPVPPG 10
+LDPA + PG
Sbjct: 636 ILDPALLRPG 645


>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 3 DPAPVP 8
DP PVP
Sbjct: 212 DPEPVP 217


>sp|MTRB_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanothermobacter marburgensis

Query: 2 LDPAPVPPG 10
LDP +P G
Sbjct: 58 LDPTTIPEG 66




37|SequenceR|190|181|QKIQMLLDPA

>sp|ARLY_METPE|ARGININOSUCCINATE lyase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 QKIQMLLDP 9
+K+Q LDP
Sbjct: 424 EKVQAALDP 432


>sp|RS3A_ARCFU|SMALL ribosomal subunit protein eS1|Archaeoglobus fulgidus (strain ATCC

Query: 1 QKIQMLLDPA 10
+KI++L +PA
Sbjct: 189 RKIELLAEPA 198


>sp|SURE_HYPBU|5'-NUCLEOTIDASE SurE|Hyperthermus butylicus (strain DSM 5456

Query: 1 QKIQMLLDP 9
QK+ +L DP
Sbjct: 199 QKVSVLYDP 207




38|SequenceR|195|186|QLEGEQKIQM

>sp|AGL7_HALVD|LOW-SALT glycan biosynthesis sulfotransferase Agl7|Haloferax volcanii

Query: 1 QLEGEQKI 8
+L+GEQK+
Sbjct: 114 RLDGEQKL 121


>sp|SIHH_METJA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EGEQKIQ 9
EGE+KIQ
Sbjct: 12 EGERKIQ 18




39|SequenceR|200|191|QQEQLQLEGE

>sp|CARA_METS5|CARBAMOYL phosphate synthase small chain|Metallosphaera sedula (strain ATCC

Query: 1 QQEQLQLEG 9
+ EQ+Q+EG
Sbjct: 84 ESEQIQIEG 92


>sp|CARA_SULTO|CARBAMOYL phosphate synthase small chain|Sulfurisphaera tokodaii (strain

Query: 1 QQEQLQLEG 9
+ EQ+Q+EG
Sbjct: 85 ESEQIQVEG 93


>sp|MCRAM_METJA|[METHYL coenzyme M reductase]-L-arginine

Query: 3 EQLQLEGE 10
EQL L+GE
Sbjct: 375 EQLTLDGE 382




40|SequenceR|205|196|EVGLAQQEQL

>sp|PUR7_METBF|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 VGLAQQEQL 10
+GLA QE+L
Sbjct: 139 LGLATQEEL 147




41|SequenceR|210|201|GAAWAEVGLA

>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 1 GAAWAE 6
GA+WAE
Sbjct: 433 GASWAE 438


>sp|NIFK_METTL|NITROGENASE molybdenum-iron protein beta chain|Methanothermococcus

Query: 1 GAAWAEVGL 9
GA WA VG+
Sbjct: 30 GAMWATVGV 38


>sp|THI4_PYRFU|THIAMINE thiazole synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GAAWAEVG 8
GA WAE+G
Sbjct: 190 GAMWAEMG 197


>sp|GATA_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 1 GAAWAEVGL 9
GA+W EV +
Sbjct: 280 GASWEEVSM 288


>sp|RRP42_THEON|EXOSOME complex component Rrp42|Thermococcus onnurineus (strain NA1)

Query: 1 GAAWAEVG 8
G+AW ++G
Sbjct: 48 GSAWVKLG 55


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GAAWAEVGL 9
G +W E+GL
Sbjct: 872 GKSWDELGL 880


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GAAWAEVGL 9
G +W E+GL
Sbjct: 872 GESWDELGL 880


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GAAWAEVGL 9
G +W E+GL
Sbjct: 872 GKSWDELGL 880




42|SequenceR|215|206|GIDPQGAAWA

>sp|ECFA_METMJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanoculleus marisnigri

Query: 1 GIDPQGAA 8
G+DPQG A
Sbjct: 167 GLDPQGVA 174


>sp|ILVC_METJA|KETOL-ACID reductoisomerase (NADP(+))|Methanocaldococcus jannaschii (strain

Query: 1 GIDPQGAAW 9
G+ P GA+W
Sbjct: 46 GLRPNGASW 54


>sp|GATD_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcoides burtonii (strain DSM

Query: 1 GIDPQGAA 8
G+DP+GA+
Sbjct: 41 GVDPEGAS 48


>sp|SECD_PYRFU|PROTEIN-EXPORT membrane protein SecD|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DPQGAAW 9
DPQ +AW
Sbjct: 134 DPQHSAW 140


>sp|Y1579_ARCFU|UNCHARACTERIZED protein AF_1579|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IDPQGAAW 9
I P+GA W
Sbjct: 143 ISPRGAGW 150


>sp|Y133_METTH|PUTATIVE ABC transporter ATP-binding protein|Methanothermobacter

Query: 1 GIDPQGAA 8
G+DP+GA+
Sbjct: 171 GLDPRGAS 178


>sp|ECFA1_METHJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanospirillum hungatei

Query: 1 GIDPQG 6
G+DPQG
Sbjct: 167 GLDPQG 172


>sp|SECD_METJA|PROTEIN-EXPORT membrane protein SecD|Methanocaldococcus jannaschii (strain ATCC

Query: 4 PQGAAWA 10
PQG WA
Sbjct: 133 PQGETWA 139


>sp|ILVC_PYRAB|KETOL-ACID reductoisomerase (NADP(+))|Pyrococcus abyssi (strain GE5 /

Query: 1 GIDPQGAAW 9
G+ P G++W
Sbjct: 49 GLRPSGSSW 57


>sp|Y583_METTM|PUTATIVE ABC transporter ATP-binding protein|Methanothermobacter

Query: 1 GIDPQGAA 8
G+DP+GA+
Sbjct: 169 GLDPRGAS 176


>sp|DHE2_HALSI|NAD-SPECIFIC glutamate dehydrogenase A|Halobacterium salinarum (Halobacterium

Query: 1 GIDPQGAAW 9
G DPQ AW
Sbjct: 168 GTDPQTMAW 176


>sp|ECFA_METST|ENERGY-COUPLING factor transporter ATP-binding protein|Methanosphaera stadtmanae

Query: 1 GIDPQGAA 8
G+DP GA+
Sbjct: 170 GLDPNGAS 177


>sp|ECFA_METMP|ENERGY-COUPLING factor transporter ATP-binding protein|Methanococcus maripaludis

Query: 1 GIDPQGAA 8
G+DP GA+
Sbjct: 169 GLDPMGAS 176


>sp|ILVC_PYRFU|KETOL-ACID reductoisomerase (NADP(+))|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GIDPQGAAW 9
G+ P+G +W
Sbjct: 49 GLRPEGNSW 57


>sp|ECFA_METJA|ENERGY-COUPLING factor transporter ATP-binding protein|Methanocaldococcus

Query: 1 GIDPQGAA 8
G+DP GA+
Sbjct: 169 GLDPVGAS 176


>sp|RL3_METTP|LARGE ribosomal subunit protein uL3|Methanothrix thermoacetophila (strain

Query: 1 GIDPQGAAWA 10
GI P G WA
Sbjct: 93 GIRPAGELWA 102


>sp|RL21_IGNH4|LARGE ribosomal subunit protein eL21|Ignicoccus hospitalis (strain

Query: 2 IDPQGAAWA 10
IDP A W+
Sbjct: 44 IDPNPAIWS 52


>sp|SYFB_HALLT|PHENYLALANINE--TRNA ligase beta subunit|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 GIDPQGAAW 9
G+DP G ++
Sbjct: 164 GVDPDGVSF 172


>sp|FOLD_HALSA|BIFUNCTIONAL protein FolD|Halobacterium salinarum (strain ATCC 700922

Query: 1 GIDPQGA 7
G+DP GA
Sbjct: 152 GVDPDGA 158




43|SequenceR|220|211|GWPEEGIDPQ

>sp|DNAK_METAR|CHAPERONE protein DnaK|Methanocella arvoryzae (strain DSM 22066

Query: 3 PEEGIDP 9
PE GIDP
Sbjct: 332 PERGIDP 338


>sp|AMPA_AERPE|PROBABLE cytosol aminopeptidase|Aeropyrum pernix (strain ATCC 700893

Query: 2 WPEEGIDP 9
WPE+G+ P
Sbjct: 466 WPEKGMAP 473


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GWPEEGIDPQ 10
GW EG+ P+
Sbjct: 219 GWVSEGLKPR 228


>sp|IF2A_HALSA|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 1 GWPEEG 6
GWP+EG
Sbjct: 5 GWPDEG 10


>sp|IF2A_HALS3|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 1 GWPEEG 6
GWP+EG
Sbjct: 5 GWPDEG 10


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WPEEGID 8
WP+ GID
Sbjct: 802 WPKVGID 808


>sp|PHP_SACS2|ARYLDIALKYLPHOSPHATASE solfataricus (strain ATCC 35092

Query: 4 EEGIDP 9
EEG+DP
Sbjct: 187 EEGVDP 192


>sp|IF2A_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 GWPEEGIDP 9
G PEE I+P
Sbjct: 165 GVPEEWIEP 173


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 GWPEEGID 8
GW EEG++
Sbjct: 219 GWIEEGLE 226


>sp|SECF_THEGJ|PROTEIN-EXPORT membrane protein SecF|Thermococcus gammatolerans (strain DSM

Query: 2 WPEEGID 8
+PE+GID
Sbjct: 54 FPEKGID 60


>sp|COOS1_METAC|CARBON monoxide dehydrogenase 1|Methanosarcina acetivorans (strain ATCC

Query: 2 WPEEGIDPQ 10
W E GI+P+
Sbjct: 180 WSELGIEPR 188


>sp|RL18_PYRHO|LARGE ribosomal subunit protein uL18|Pyrococcus horikoshii (strain ATCC

Query: 1 GWPEEGIDPQ 10
G+ E+G+DP+
Sbjct: 170 GYLEKGLDPE 179


>sp|RL18_PYRAB|LARGE ribosomal subunit protein uL18|Pyrococcus abyssi (strain GE5 /

Query: 1 GWPEEGIDPQ 10
G+ E+G+DP+
Sbjct: 170 GYLEKGLDPE 179


>sp|TRUD_PYRAR|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum arsenaticum (strain DSM

Query: 4 EEGIDP 9
EEG+DP
Sbjct: 343 EEGVDP 348


>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GWPEEGID 8
GW EEG++
Sbjct: 218 GWIEEGLE 225


>sp|THIC2_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina barkeri (strain Fusaro /

Query: 5 EGIDPQ 10
EGIDP+
Sbjct: 23 EGIDPE 28


>sp|AMT2_METJA|AMMONIUM transporter Amt2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WPEEGID 8
WP G+D
Sbjct: 111 WPNNGLD 117


>sp|ENDA_AERPE|TRNA-SPLICING endonuclease|Aeropyrum pernix (strain ATCC 700893

Query: 3 PEEGIDP 9
PE+ IDP
Sbjct: 143 PEDNIDP 149


>sp|TRUA_METAR|TRNA pseudouridine synthase A|Methanocella arvoryzae (strain DSM 22066

Query: 1 GWPEEGIDPQ 10
GW E+ DP+
Sbjct: 196 GWIEKMFDPE 205


>sp|UBIX_AERPE|FLAVIN prenyltransferase UbiX|Aeropyrum pernix (strain ATCC 700893

Query: 4 EEGIDPQ 10
EEGI+P+
Sbjct: 50 EEGIEPE 56


>sp|TRUD_PYRAE|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum aerophilum (strain ATCC

Query: 4 EEGIDP 9
EEG+DP
Sbjct: 343 EEGLDP 348


>sp|THIC1_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina barkeri (strain Fusaro /

Query: 4 EEGIDPQ 10
+EG+DP+
Sbjct: 22 DEGLDPE 28


>sp|HIS4_THEKO|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Thermococcus kodakarensis (strain

Query: 1 GWPEEG 6
GW EEG
Sbjct: 135 GWVEEG 140


>sp|THIC2_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 EEGIDPQ 10
+EG+DP+
Sbjct: 22 DEGLDPE 28


>sp|CETZ1_HALVD|TUBULIN-LIKE protein CetZ1|Haloferax volcanii (strain ATCC 29605

Query: 1 GWPEEGIDPQ 10
G+ EG++P+
Sbjct: 232 GYASEGVEPR 241


>sp|THIC_THEGJ|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 5 EGIDPQ 10
EGIDP+
Sbjct: 23 EGIDPE 28


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 2 WPEEGIDP 9
+ E+GIDP
Sbjct: 1310 YGEDGIDP 1317


>sp|CYAS_METPE|CYSTEATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 WPEEGID 8
WPE G D
Sbjct: 93 WPERGAD 99


>sp|IF2A_STAMF|TRANSLATION initiation factor 2 subunit|Staphylothermus marinus (strain ATCC

Query: 1 GWPEEGIDP 9
G PEE I+P
Sbjct: 155 GIPEEWIEP 163


>sp|ALF1_AERPE|PROBABLE fructose-bisphosphate aldolase class 1|Aeropyrum pernix (strain

Query: 3 PEEGIDPQ 10
PEE +DP+
Sbjct: 39 PEERLDPR 46


>sp|GATE_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Natronomonas pharaonis (strain ATCC

Query: 3 PEEGIDP 9
P+EGI+P
Sbjct: 526 PQEGINP 532


>sp|THIC2_METMA|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 EEGIDPQ 10
+EG+DP+
Sbjct: 22 DEGLDPE 28


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain ATCC

Query: 2 WPEEGIDP 9
+ E+GIDP
Sbjct: 857 YGEDGIDP 864


>sp|SPEH_THEKO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus kodakarensis (strain ATCC

Query: 2 WPEEG 6
WPE+G
Sbjct: 73 WPEKG 77


>sp|IF2A_METST|TRANSLATION initiation factor 2 subunit|Methanosphaera stadtmanae (strain

Query: 2 WPEEG 6
WPEEG
Sbjct: 8 WPEEG 12


>sp|SPEH_THEGJ|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus gammatolerans (strain DSM

Query: 2 WPEEG 6
WPE+G
Sbjct: 73 WPEKG 77


>sp|Y2580_AERPE|UNCHARACTERIZED protein APE_2580|Aeropyrum pernix (strain ATCC 700893

Query: 4 EEGIDP 9
EEG+DP
Sbjct: 233 EEGLDP 238


>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 EEGIDPQ 10
EEG+DP+
Sbjct: 68 EEGVDPE 74


>sp|SPEH_PYRFU|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WPEEG 6
WPE+G
Sbjct: 70 WPEKG 74


>sp|IF2A_METTH|TRANSLATION initiation factor 2 subunit|Methanothermobacter

Query: 2 WPEEG 6
WPEEG
Sbjct: 11 WPEEG 15


>sp|PHAC_HALMT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloferax mediterranei (strain ATCC 33500

Query: 3 PEEGIDPQ 10
P+EG+ PQ
Sbjct: 387 PDEGLKPQ 394


>sp|HACB2_METAC|METHANOGEN homoaconitase small subunit 2|Methanosarcina acetivorans (strain

Query: 5 EGIDPQ 10
EGIDP+
Sbjct: 41 EGIDPE 46


>sp|SPEH_THEON|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus onnurineus (strain NA1)

Query: 2 WPEEG 6
WPE+G
Sbjct: 70 WPEKG 74


>sp|SPEH_PYRAB|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus abyssi (strain GE5 /

Query: 2 WPEEG 6
WPE+G
Sbjct: 70 WPEKG 74


>sp|SPEH_PYRHO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 WPEEG 6
WPE+G
Sbjct: 70 WPEKG 74


>sp|TFE_METKA|TRANSCRIPTION factor E|Methanopyrus kandleri (strain AV19 /

Query: 4 EEGIDPQ 10
E+G+DP+
Sbjct: 24 EKGVDPE 30




44|SequenceR|225|216|DLQSLGWPEE

>sp|NEP1_SULTO|RIBOSOMAL RNA small subunit methyltransferase|Sulfurisphaera tokodaii (strain

Query: 2 LQSLGWP 8
LQ LGWP
Sbjct: 213 LQQLGWP 219


>sp|MPTA2_METAR|GTP cyclohydrolase MptA 2|Methanocella arvoryzae (strain DSM 22066

Query: 1 DLQSLGWPEE 10
+LQ+LG P+E
Sbjct: 172 ELQNLGVPQE 181


>sp|YD5A_METJA|UNCHARACTERIZED protein MJ1351.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LQSLGWPEE 10
+++GWP+E
Sbjct: 145 FKAVGWPDE 153


>sp|KATG_NATPD|CATALASE-PEROXIDASE pharaonis (strain ATCC 35678

Query: 1 DLQSLGW 7
DLQ LGW
Sbjct: 266 DLQGLGW 272


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 LQSLGWPEE 10
L++LG PEE
Sbjct: 419 LENLGMPEE 427


>sp|HUTH_HALSA|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DLQSLGWP 8
DL+SLG P
Sbjct: 409 DLRSLGQP 416


>sp|HUTH_HALS3|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DLQSLGWP 8
DL+SLG P
Sbjct: 409 DLRSLGQP 416


>sp|MCH_METJA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QSLGWPE 9
+SLGW E
Sbjct: 316 KSLGWTE 322


>sp|NADK_METLZ|NAD kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 QSLGW 7
QSLGW
Sbjct: 19 QSLGW 23


>sp|SUI1_AERPE|PROTEIN translation factor SUI1 homolog|Aeropyrum pernix (strain ATCC

Query: 2 LQSLGWPEE 10
L LG+PEE
Sbjct: 87 LVELGFPEE 95


>sp|RTCB_AERPE|TRNA-SPLICING ligase RtcB|Aeropyrum pernix (strain ATCC 700893

Query: 6 GWPEE 10
GWPE+
Sbjct: 163 GWPED 167


>sp|RFCL_METKA|REPLICATION factor C large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 DLQSLGWPEE 10
D+++LGW ++
Sbjct: 233 DVEALGWRDK 242


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 6 GWPEE 10
GWPEE
Sbjct: 1054 GWPEE 1058




45|SequenceR|230|221|DGAGSDLQSL

>sp|MFNF_METJA|(4- jannaschii (strain ATCC 43067

Query: 1 DGAGSDLQS 9
DGAG D +S
Sbjct: 221 DGAGKDFES 229


>sp|RFCS_METHJ|REPLICATION factor C small subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DGAGSDLQ 8
+GAGSD+Q
Sbjct: 299 EGAGSDIQ 306


>sp|CBIA_THEAC|COBYRINATE a,c-diamide synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DGAGSDL 7
DGAGSD
Sbjct: 95 DGAGSDF 101


>sp|RFCL_METBF|REPLICATION factor C large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 DGAGSDLQS 9
+GAG DL+S
Sbjct: 192 EGAGGDLRS 200


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 1 DGAGSDLQSL 10
D AG+D+Q+L
Sbjct: 460 DAAGADVQAL 469


>sp|CBIN_METVS|COBALT transport protein CbiN|Methanococcus vannielii (strain ATCC 35089

Query: 1 DGAGSDL 7
DGA SDL
Sbjct: 37 DGAASDL 43




46|SequenceR|235|226|ADTSIDGAGS

>sp|PRIL_THEAC|DNA primase large subunit PriL|Thermoplasma acidophilum (strain ATCC

Query: 1 ADTSIDGAG 9
ADT+I G+G
Sbjct: 19 ADTTISGSG 27


>sp|DADD_METTH|5'-DEOXYADENOSINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 ADTSIDGAGS 10
ADT IDG G
Sbjct: 43 ADTVIDGTGK 52


>sp|SECD_HALWD|PROTEIN-EXPORT membrane protein SecD|Haloquadratum walsbyi (strain DSM 16790

Query: 3 TSIDGAG 9
T+IDGAG
Sbjct: 88 TAIDGAG 94


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 3 TSIDGAGS 10
T IDGAG+
Sbjct: 206 TDIDGAGN 213




47|SequenceR|240|231|HVGSTADTSI

>sp|CCA_THEVO|CCA-ADDING enzyme|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HVGSTADTS 9
HVG ADTS
Sbjct: 337 HVGPPADTS 345




48|SequenceR|245|236|TSFNSHVGST

>sp|NIKR_HALMA|PUTATIVE nickel-responsive regulator|Haloarcula marismortui (strain ATCC

Query: 1 TSFNSHVG 8
++F+SHVG
Sbjct: 85 SNFHSHVG 92




49|SequenceR|250|241|TPPITTSFNS

>sp|TRUA_PYRCJ|TRNA pseudouridine synthase A|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 TPPITT 6
TPP+TT
Sbjct: 133 TPPVTT 138


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PPITTSFN 9
PP+ SFN
Sbjct: 426 PPVRESFN 433


>sp|DNAG_METLZ|DNA primase DnaG|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 PPITTS 7
PPITTS
Sbjct: 329 PPITTS 334


>sp|DNAK_HALMA|CHAPERONE protein DnaK|Haloarcula marismortui (strain ATCC 43049

Query: 1 TPPITTSFN 9
TP I SFN
Sbjct: 442 TPQIEVSFN 450


>sp|DNAK_HALLT|CHAPERONE protein DnaK|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 TPPITTSFN 9
TP I SFN
Sbjct: 443 TPQIEVSFN 451


>sp|FEN_HYPBU|FLAP endonuclease 1|Hyperthermus butylicus (strain DSM 5456

Query: 2 PPITTSF 8
PP+TT +
Sbjct: 289 PPVTTDY 295


>sp|DAPAL_HALSA|UNCHARACTERIZED DapA-like lyase VNG_0444G|Halobacterium salinarum (strain ATCC

Query: 2 PPITTSFNS 10
PP+ T+F++
Sbjct: 21 PPVVTAFDA 29


>sp|DAPAL_HALS3|UNCHARACTERIZED DapA-like lyase OE_1665R|Halobacterium salinarum (strain ATCC

Query: 2 PPITTSFNS 10
PP+ T+F++
Sbjct: 21 PPVVTAFDA 29


>sp|CAPPA_METHJ|PHOSPHOENOLPYRUVATE carboxylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PITTSFNS 10
P+TTSF S
Sbjct: 131 PMTTSFAS 138


>sp|FEN_METB6|FLAP endonuclease 1|Methanoregula boonei (strain DSM 21154

Query: 2 PPITTSF 8
PP+TT +
Sbjct: 280 PPVTTEY 286




50|SequenceR|255|246|DTQWSTPPIT

>sp|END4_THEAC|PROBABLE endonuclease 4|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 QWSTPPI 9
+WS+PP+
Sbjct: 49 RWSSPPL 55


>sp|CSA1_SACS2|CRISPR-ASSOCIATED exonuclease Csa1|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 WSTPPI 9
WS PP+
Sbjct: 31 WSEPPV 36


>sp|PCKA_AERPE|PHOSPHOENOLPYRUVATE carboxykinase (ATP)|Aeropyrum pernix (strain ATCC 700893

Query: 1 DTQWSTPP 8
D +W+ PP
Sbjct: 17 DIEWNPPP 24


>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 3 QWSTPPI 9
+WS PP+
Sbjct: 524 KWSPPPL 530


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 QWSTPP 8
QW+ PP
Sbjct: 528 QWTPPP 533


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 1 DTQWSTP 7
DT WS P
Sbjct: 941 DTMWSYP 947


>sp|ASSY_PICTO|ARGININOSUCCINATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 3 QWSTPP 8
+W TPP
Sbjct: 197 EWVTPP 202


>sp|Y1269_PYRHO|UPF0098 protein PH1269|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 WSTPPIT 10
W+ PP+T
Sbjct: 105 WNIPPVT 111


>sp|CSD_HALSA|PROBABLE cysteine desulfurase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DTQWSTPP 8
D W+ PP
Sbjct: 270 DATWNDPP 277


>sp|Y084_ARCFU|UNCHARACTERIZED protein AF_0084|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QWSTPP 8
+WS+PP
Sbjct: 3 RWSSPP 8




51|SequenceR|260|251|HHPPLDTQWS

>sp|Y3856_METAC|UPF0285 protein MA_3856|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HHPPLDTQ 8
HH PLD Q
Sbjct: 185 HHGPLDLQ 192


>sp|Y208_METBF|UPF0285 protein Mbar_A0208|Methanosarcina barkeri (strain Fusaro /

Query: 1 HHPPLDTQ 8
HH PLD Q
Sbjct: 185 HHGPLDLQ 192


>sp|MCRZ_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 2 HPPLD 6
HPPLD
Sbjct: 56 HPPLD 60


>sp|MCRZ_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 2 HPPLD 6
HPPLD
Sbjct: 56 HPPLD 60


>sp|Y679_METMA|UPF0285 protein MM_0679|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HHPPLDTQ 8
HH PLD +
Sbjct: 185 HHGPLDLE 192


>sp|PURQ_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanothermobacter thermautotrophicus

Query: 2 HPPLDTQWS 10
HP + QW+
Sbjct: 106 HPKFNCQWT 114


>sp|PPSA_METTH|PROBABLE phosphoenolpyruvate synthase|Methanothermobacter thermautotrophicus

Query: 4 PLDTQWS 10
P DT+W+
Sbjct: 324 PQDTEWA 330


>sp|GCH3_SACS2|GTP cyclohydrolase III|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 PLDTQWS 10
PL+ QW+
Sbjct: 93 PLEAQWN 99


>sp|GCH3_SACI7|GTP cyclohydrolase III|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 PLDTQWS 10
PL+ QW+
Sbjct: 93 PLEAQWN 99


>sp|GCH3_SACI6|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.16.4 /

Query: 4 PLDTQWS 10
PL+ QW+
Sbjct: 93 PLEAQWN 99


>sp|GCH3_SACI4|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.14.25 /

Query: 4 PLDTQWS 10
PL+ QW+
Sbjct: 93 PLEAQWN 99


>sp|GCH3_SACI3|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.16.27)

Query: 4 PLDTQWS 10
PL+ QW+
Sbjct: 93 PLEAQWN 99


>sp|GCH3_SACI2|GTP cyclohydrolase III|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 PLDTQWS 10
PL+ QW+
Sbjct: 93 PLEAQWN 99


>sp|GCH3_SACI1|GTP cyclohydrolase III|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 PLDTQWS 10
PL+ QW+
Sbjct: 93 PLEAQWN 99


>sp|PHS_HALMA|PUTATIVE pterin-4-alpha-carbinolamine dehydratase|Haloarcula marismortui

Query: 1 HHPPLDTQW 9
HHP + +W
Sbjct: 53 HHPEMTIRW 61


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 HPPLDTQW 9
H P D +W
Sbjct: 506 HLPFDKEW 513


>sp|LYSY_AERPE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 HPPLDTQWS 10
HP ++ +W+
Sbjct: 27 HPGVEVEWA 35




52|SequenceR|265|256|CASSPHHPPL

>sp|RADA_CENSY|DNA repair and recombination protein|Cenarchaeum symbiosum (strain A)

Query: 4 SPHHP 8
SPHHP
Sbjct: 301 SPHHP 305


>sp|LEUD_METMA|3-ISOPROPYLMALATE dehydratase small subunit|Methanosarcina mazei (strain ATCC

Query: 1 CASSPHHPPL 10
C SS H PL
Sbjct: 61 CGSSREHAPL 70


>sp|LEUD_METJA|ISOPROPYLMALATE/CITRAMALATE isomerase small subunit|Methanocaldococcus jannaschii (strain

Query: 1 CASSPHHPPL 10
C SS H PL
Sbjct: 65 CGSSREHAPL 74


>sp|LEUD_METAC|3-ISOPROPYLMALATE dehydratase small subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 CASSPHHPPL 10
C SS H PL
Sbjct: 61 CGSSREHAPL 70


>sp|LEUD1_PYRFU|3-ISOPROPYLMALATE dehydratase small subunit 1|Pyrococcus furiosus (strain ATCC

Query: 1 CASSPHHPPL 10
C SS H PL
Sbjct: 63 CGSSREHAPL 72


>sp|LEUD1_PYRAB|3-ISOPROPYLMALATE dehydratase small subunit 1|Pyrococcus abyssi (strain GE5 /

Query: 1 CASSPHHPPL 10
C SS H PL
Sbjct: 63 CGSSREHAPL 72


>sp|LEUD1_ARCFU|3-ISOPROPYLMALATE dehydratase small subunit 1|Archaeoglobus fulgidus (strain ATCC

Query: 1 CASSPHHPPL 10
C SS H PL
Sbjct: 60 CGSSREHAPL 69


>sp|LEUD_METTH|3-ISOPROPYLMALATE dehydratase small subunit|Methanothermobacter thermautotrophicus

Query: 1 CASSPHHPPL 10
C SS H PL
Sbjct: 61 CGSSREHAPL 70


>sp|HEM1_METM5|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C5 /

Query: 1 CA-SSPHH 7
CA SSPHH
Sbjct: 223 CATSSPHH 230


>sp|AGLB1_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ASSPHH 7
AS+PHH
Sbjct: 968 ASAPHH 973


>sp|DAPA_METKA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 ASSPHHPPL 10
ASSP PPL
Sbjct: 267 ASSPPRPPL 275


>sp|RECJ2_METJA|EXONUCLEASE RecJ2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 HHPPL 10
HHPP+
Sbjct: 106 HHPPV 110


>sp|RL15E_STAMF|LARGE ribosomal subunit protein eL15|Staphylothermus marinus (strain ATCC

Query: 5 PHHPPL 10
PHHP +
Sbjct: 137 PHHPAI 142


>sp|RL15E_METHJ|LARGE ribosomal subunit protein eL15|Methanospirillum hungatei JF-1

Query: 5 PHHPPL 10
PHHP +
Sbjct: 137 PHHPSI 142


>sp|RL15E_METAR|LARGE ribosomal subunit protein eL15|Methanocella arvoryzae (strain DSM

Query: 5 PHHPPL 10
PHHP +
Sbjct: 137 PHHPSI 142


>sp|RL15E_DESA1|LARGE ribosomal subunit protein eL15|Desulfurococcus amylolyticus (strain

Query: 5 PHHPPL 10
PHHP +
Sbjct: 136 PHHPSI 141


>sp|LEUC_THEKO|3-ISOPROPYLMALATE dehydratase large subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 SSPHHP 8
+ PHHP
Sbjct: 235 AKPHHP 240


>sp|LEUD1_METKA|3-ISOPROPYLMALATE dehydratase small subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 1 CASSPHHPPL 10
C SS H P+
Sbjct: 65 CGSSREHAPI 74


>sp|SYFB_THEON|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus onnurineus (strain NA1)

Query: 6 HHPP 9
HHPP
Sbjct: 415 HHPP 418


>sp|RL15E_THEON|LARGE ribosomal subunit protein eL15|Thermococcus onnurineus (strain NA1)

Query: 5 PHHP 8
PHHP
Sbjct: 135 PHHP 138


>sp|RL15E_THEGJ|LARGE ribosomal subunit protein eL15|Thermococcus gammatolerans (strain

Query: 5 PHHP 8
PHHP
Sbjct: 135 PHHP 138


>sp|RL15E_PYRHO|LARGE ribosomal subunit protein eL15|Pyrococcus horikoshii (strain ATCC

Query: 5 PHHP 8
PHHP
Sbjct: 135 PHHP 138


>sp|RL15E_PYRFU|LARGE ribosomal subunit protein eL15|Pyrococcus furiosus (strain ATCC

Query: 5 PHHP 8
PHHP
Sbjct: 135 PHHP 138


>sp|RL15E_PYRAB|LARGE ribosomal subunit protein eL15|Pyrococcus abyssi (strain GE5 /

Query: 5 PHHP 8
PHHP
Sbjct: 135 PHHP 138


>sp|RL15E_METMA|LARGE ribosomal subunit protein eL15|Methanosarcina mazei (strain ATCC

Query: 5 PHHP 8
PHHP
Sbjct: 137 PHHP 140


>sp|RL15E_METAC|LARGE ribosomal subunit protein eL15|Methanosarcina acetivorans (strain

Query: 5 PHHP 8
PHHP
Sbjct: 137 PHHP 140


>sp|RIFK_IGNH4|RIBOFLAVIN kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 6 HHPP 9
HHPP
Sbjct: 148 HHPP 151


>sp|HACA_METJA|METHANOGEN homoaconitase large subunit|Methanocaldococcus jannaschii (strain

Query: 5 PHHP 8
PHHP
Sbjct: 277 PHHP 280


>sp|EF2_CENSY|ELONGATION factor 2|Cenarchaeum symbiosum (strain A)

Query: 6 HHPP 9
HHPP
Sbjct: 254 HHPP 257


>sp|RL15E_THEKO|LARGE ribosomal subunit protein eL15|Thermococcus kodakarensis (strain

Query: 5 PHHP 8
PHHP
Sbjct: 135 PHHP 138


>sp|MTD_METJA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanocaldococcus

Query: 2 ASSPHHP 8
+ PHHP
Sbjct: 256 SRKPHHP 262


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 5 PHHP 8
PHHP
Sbjct: 192 PHHP 195


>sp|CARA_THEVO|CARBAMOYL phosphate synthase small chain|Thermoplasma volcanium (strain ATCC

Query: 5 PHHPPL 10
PHH P+
Sbjct: 154 PHHDPV 159


>sp|KDPA_HALSA|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 2 ASSPHHPP 9
A+S H PP
Sbjct: 36 ANSDHRPP 43


>sp|KDPA_HALS3|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 2 ASSPHHPP 9
A+S H PP
Sbjct: 36 ANSDHRPP 43


>sp|DABA_HALMA|PROBABLE inorganic carbon transporter subunit|Haloarcula marismortui (strain

Query: 5 PHHPPL 10
PHH PL
Sbjct: 720 PHHQPL 725


>sp|CYAS_METLZ|CYSTEATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 SSPHHP 8
+ PHHP
Sbjct: 22 ACPHHP 27


>sp|SAT_STAMF|SULFATE adenylyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 3 SSPHHP 8
+ PHHP
Sbjct: 159 NQPHHP 164


>sp|G6PD_HALVD|NAD-DEPENDENT glucose-6-phosphate dehydrogenase|Haloferax volcanii (strain ATCC

Query: 4 SPHHPP 9
+ HHPP
Sbjct: 183 TQHHPP 188


>sp|GCH1L_METTH|GTP cyclohydrolase 1 type 2|Methanothermobacter thermautotrophicus

Query: 6 HHPP 9
HHPP
Sbjct: 61 HHPP 64




53|SequenceR|270|261|LTGDSCASSP

>sp|KGSDH_SACS2|2,5-DIOXOPENTANOATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LTGDSCASS 9
LTG SC ++
Sbjct: 278 LTGQSCTAT 286




54|SequenceR|275|266|ATNLKLTGDS

>sp|Y1291_METJA|UNCHARACTERIZED protein MJ1291|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TNLKLTGDS 10
TNL L GDS
Sbjct: 67 TNLDLNGDS 75


>sp|CDC61_THEAC|PUTATIVE ORC1-type DNA replication protein|Thermoplasma acidophilum

Query: 2 TNLKLTGDS 10
TNL L GDS
Sbjct: 24 TNLILYGDS 32


>sp|Y1572_ARCFU|UNCHARACTERIZED protein AF_1572|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TNLKLTGD 9
T +KLTGD
Sbjct: 17 TYIKLTGD 24


>sp|VHUB_METVO|POLYFERREDOXIN protein VhuB|Methanococcus voltae

Query: 4 LKLTGD 9
LKLTGD
Sbjct: 363 LKLTGD 368




55|SequenceR|280|271|DETSAATNLK

>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 2 ETSAATNLK 10
ETSAAT ++
Sbjct: 662 ETSAATRMR 670


>sp|DADD_METTP|5'-DEOXYADENOSINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DETSAAT 7
DET+AAT
Sbjct: 121 DETAAAT 127




56|SequenceR|285|276|IVIKVDETSA

>sp|Y2114_ARCFU|UNCHARACTERIZED protein AF_2114|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IKVDETSA 10
IK+D+TSA
Sbjct: 244 IKIDKTSA 251


>sp|RL6_HALWD|LARGE ribosomal subunit protein uL6|Haloquadratum walsbyi (strain DSM

Query: 1 IVIKVDETSA 10
+VI+ DET A
Sbjct: 52 VVIETDETDA 61


>sp|AATA_METST|A-TYPE ATP synthase subunit A|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 IVIKVDETSA 10
I+ VDETSA
Sbjct: 134 IIGTVDETSA 143


>sp|EF2_CENSY|ELONGATION factor 2|Cenarchaeum symbiosum (strain A)

Query: 1 IVIKVDETSA 10
+V+K+DE S
Sbjct: 420 LVVKIDEESG 429




57|SequenceR|290|281|QVETKIVIKV

>sp|RL15_THEPD|LARGE ribosomal subunit protein uL15|Thermofilum pendens (strain DSM 2475

Query: 1 QVETKIVIKV 10
QV KI++KV
Sbjct: 114 QVRNKIIVKV 123


>sp|PTH_HALSA|PEPTIDYL-TRNA hydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 3 ETKIVIKV 10
+TK+V+KV
Sbjct: 46 QTKVVVKV 53


>sp|PTH_HALS3|PEPTIDYL-TRNA hydrolase|Halobacterium salinarum (strain ATCC 29341

Query: 3 ETKIVIKV 10
+TK+V+KV
Sbjct: 46 QTKVVVKV 53




58|SequenceR|295|286|VVEEEQVETK

***** No hits found ******


59|SequenceR|300|291|HVPTAVVEEE

>sp|Y1259_THEVO|UPF0292 protein TV1259|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HVPTAVVEE 9
HVP VEE
Sbjct: 96 HVPIRTVEE 104


>sp|DNLI_NITMS|DNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 HVPTAVVEEE 10
H+P A+V+ E
Sbjct: 376 HIPMAIVKNE 385


>sp|TFRA_METTM|FUMARATE reductase (CoM/CoB) subunit A|Methanothermobacter marburgensis

Query: 1 HVPTAVVEEE 10
H+P V+EE+
Sbjct: 311 HLPDEVIEEK 320




60|SequenceR|305|296|ELDTPHVPTA

>sp|RADA_METVO|DNA repair and recombination protein|Methanococcus voltae

Query: 3 DTPHVPTA 10
D+PH+P A
Sbjct: 302 DSPHLPDA 309


>sp|RADA_METJA|DNA repair and recombination protein|Methanocaldococcus jannaschii

Query: 3 DTPHVPTA 10
D+PH+P A
Sbjct: 332 DSPHLPDA 339


>sp|RADA_ARCFU|DNA repair and recombination protein|Archaeoglobus fulgidus (strain

Query: 2 LDTPHVP 8
+D+PH+P
Sbjct: 305 IDSPHLP 311


>sp|RADA_METS3|DNA repair and recombination protein|Methanobrevibacter smithii (strain

Query: 2 LDTPHVP 8
+D+PH+P
Sbjct: 290 VDSPHLP 296


>sp|RADA_METTH|DNA repair and recombination protein|Methanothermobacter

Query: 2 LDTPHVP 8
+D+PH+P
Sbjct: 290 VDSPHLP 296


>sp|RADA_METMP|DNA repair and recombination protein|Methanococcus maripaludis (strain

Query: 3 DTPHVPTA 10
D+PH+P +
Sbjct: 302 DSPHLPDS 309


>sp|RADA_METMI|DNA repair and recombination protein|Methanococcus maripaludis

Query: 3 DTPHVPTA 10
D+PH+P +
Sbjct: 302 DSPHLPDS 309


>sp|RADA_METM7|DNA repair and recombination protein|Methanococcus maripaludis (strain

Query: 3 DTPHVPTA 10
D+PH+P +
Sbjct: 302 DSPHLPDS 309


>sp|RADA_METM6|DNA repair and recombination protein|Methanococcus maripaludis (strain

Query: 3 DTPHVPTA 10
D+PH+P +
Sbjct: 302 DSPHLPDS 309


>sp|RADA_METM5|DNA repair and recombination protein|Methanococcus maripaludis (strain

Query: 3 DTPHVPTA 10
D+PH+P +
Sbjct: 302 DSPHLPDS 309


>sp|RADA_METST|DNA repair and recombination protein|Methanosphaera stadtmanae (strain

Query: 2 LDTPHVP 8
+D+PH+P
Sbjct: 290 VDSPHLP 296


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 2 LDTPHVP 8
+D+PH+P
Sbjct: 815 IDSPHLP 821


>sp|PRIS_METMA|DNA primase small subunit PriS|Methanosarcina mazei (strain ATCC

Query: 1 ELDTPHVPTA 10
+LD H+P A
Sbjct: 98 DLDADHLPNA 107


>sp|RADA_IGNH4|DNA repair and recombination protein|Ignicoccus hospitalis (strain

Query: 2 LDTPHVPTA 10
+D PH+P A
Sbjct: 303 VDAPHLPEA 311


>sp|RADA_SULAC|DNA repair and recombination protein|Sulfolobus acidocaldarius (strain

Query: 2 LDTPHVP 8
+D PH+P
Sbjct: 297 VDAPHLP 303


>sp|SDO1_METJA|RIBOSOME maturation protein SDO1 homolog|Methanocaldococcus jannaschii

Query: 1 ELDTPHVP 8
+ DTPH P
Sbjct: 120 QTDTPHPP 127


>sp|RFCL_HALSA|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 ELDTPHVP 8
ELDT HV
Sbjct: 392 ELDTEHVA 399


>sp|RFCL_HALS3|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 29341

Query: 1 ELDTPHVP 8
ELDT HV
Sbjct: 392 ELDTEHVA 399


>sp|SYDND_HALSA|ASPARTATE--TRNA(ASP/ASN) ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ELDTPHVPTA 10
E+DTP + TA
Sbjct: 157 EVDTPELSTA 166


>sp|PRIS_METAC|DNA primase small subunit PriS|Methanosarcina acetivorans (strain ATCC

Query: 1 ELDTPHVPTA 10
+LD H+P A
Sbjct: 98 DLDADHLPNA 107


>sp|SYW_ARCFU|TRYPTOPHAN--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ELDTPHV 7
E+D PH+
Sbjct: 32 EIDNPHI 38


>sp|RADA_PYRFU|DNA repair and recombination protein|Pyrococcus furiosus (strain ATCC

Query: 2 LDTPHVP 8
+D PH+P
Sbjct: 328 IDAPHLP 334


>sp|RADA_SULTO|DNA repair and recombination protein|Sulfurisphaera tokodaii (strain

Query: 2 LDTPHVP 8
+D PH+P
Sbjct: 300 VDAPHLP 306


>sp|RADA_DESAM|DNA repair and recombination protein|Desulfurococcus amylolyticus

Query: 2 LDTPHVP 8
+D PH+P
Sbjct: 303 VDAPHLP 309


>sp|RADA_DESA1|DNA repair and recombination protein|Desulfurococcus amylolyticus

Query: 2 LDTPHVP 8
+D PH+P
Sbjct: 303 VDAPHLP 309


>sp|RADA_PYRAB|DNA repair and recombination protein|Pyrococcus abyssi (strain GE5 /

Query: 2 LDTPHVP 8
+D PH+P
Sbjct: 332 IDAPHLP 338


>sp|RADA_PYRHO|DNA repair and recombination protein|Pyrococcus horikoshii (strain ATCC

Query: 2 LDTPHVP 8
+D PH+P
Sbjct: 508 IDAPHLP 514


>sp|RADA_METS5|DNA repair and recombination protein|Metallosphaera sedula (strain ATCC

Query: 2 LDTPHVP 8
+D PH+P
Sbjct: 300 VDAPHLP 306


>sp|RADA_NANEQ|DNA repair and recombination protein|Nanoarchaeum equitans (strain

Query: 2 LDTPHVP 8
+D+PH+P
Sbjct: 302 VDSPHLP 308


>sp|RADA_SACS2|DNA repair and recombination protein|Saccharolobus solfataricus (strain

Query: 2 LDTPHVP 8
+D PH+P
Sbjct: 300 VDAPHLP 306


>sp|PRIS_METBF|DNA primase small subunit PriS|Methanosarcina barkeri (strain Fusaro /

Query: 1 ELDTPHVPTA 10
+LD H+P A
Sbjct: 98 DLDADHLPDA 107


>sp|RADA_SACI7|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 2 LDTPHVP 8
+D PH+P
Sbjct: 300 VDAPHLP 306


>sp|RADA_SACI6|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 2 LDTPHVP 8
+D PH+P
Sbjct: 300 VDAPHLP 306


>sp|RADA_SACI4|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 2 LDTPHVP 8
+D PH+P
Sbjct: 300 VDAPHLP 306


>sp|RADA_SACI3|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 2 LDTPHVP 8
+D PH+P
Sbjct: 300 VDAPHLP 306


>sp|RADA_SACI2|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 2 LDTPHVP 8
+D PH+P
Sbjct: 300 VDAPHLP 306


>sp|RADA_SACI1|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 2 LDTPHVP 8
+D PH+P
Sbjct: 300 VDAPHLP 306


>sp|PRIS_METBU|DNA primase small subunit PriS|Methanococcoides burtonii (strain DSM

Query: 1 ELDTPHVPTA 10
+LD H+P A
Sbjct: 98 DLDADHIPGA 107


>sp|CYAS_METB6|CYSTEATE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 ELDTPHVPTA 10
ELD P P A
Sbjct: 285 ELDMPDAPNA 294


>sp|PRIS_THEVO|DNA primase small subunit PriS|Thermoplasma volcanium (strain ATCC

Query: 1 ELDTPHVPTA 10
+LD+ H+P A
Sbjct: 96 DLDSDHLPGA 105


>sp|MRE11_SACS2|DNA double-strand break repair protein|Saccharolobus solfataricus

Query: 5 PHVPT 9
PH+PT
Sbjct: 127 PHIPT 131




61|SequenceR|310|301|LTGHAELDTP

>sp|TKTN_METJA|PUTATIVE transketolase N-terminal section|Methanocaldococcus jannaschii

Query: 1 LTGHAELDTP 10
L GH +DTP
Sbjct: 102 LQGHPSMDTP 111


>sp|MSRA_METTH|PEPTIDE methionine sulfoxide reductase MsrA|Methanothermobacter

Query: 1 LTGHAEL 7
LTGHAE+
Sbjct: 54 LTGHAEV 60


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 GHAELDTP 10
GH +LD P
Sbjct: 95 GHEDLDVP 102


>sp|ATGT_PICTO|TRNA-GUANINE(15) transglycosylase|Picrophilus torridus (strain ATCC 700027

Query: 2 TGHAELDTP 10
T H E++TP
Sbjct: 17 TPHGEIETP 25


>sp|HIS4_METVS|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus vannielii (strain

Query: 4 HAELDTP 10
H ELD P
Sbjct: 26 HVELDNP 32


>sp|HIS4_METVA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus vannielii

Query: 4 HAELDTP 10
H ELD P
Sbjct: 26 HVELDNP 32


>sp|HIS4_METMP|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis

Query: 4 HAELDTP 10
H ELD P
Sbjct: 26 HVELDNP 32


>sp|HIS4_METM7|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis

Query: 4 HAELDTP 10
H ELD P
Sbjct: 26 HVELDNP 32


>sp|HIS4_METM6|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis

Query: 4 HAELDTP 10
H ELD P
Sbjct: 26 HVELDNP 32


>sp|HIS4_METM5|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis

Query: 4 HAELDTP 10
H ELD P
Sbjct: 26 HVELDNP 32


>sp|METAA_METII|HOMOSERINE O-acetyltransferase|Methanomassiliicoccus intestinalis (strain

Query: 1 LTGHAELDT 9
+TGH E DT
Sbjct: 230 VTGHLEYDT 238


>sp|SURE_METMA|5'-NUCLEOTIDASE SurE|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 HAELDTP 10
HAE DTP
Sbjct: 187 HAEEDTP 193


>sp|PCCB_HALMT|PROPIONYL-COA carboxylase, carboxyltransferase subunit|Haloferax mediterranei

Query: 1 LTGHAELD 8
+TGH E+D
Sbjct: 77 ITGHGEVD 84


>sp|SURE_METAC|5'-NUCLEOTIDASE SurE|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 HAELDTP 10
HAE DTP
Sbjct: 187 HAEEDTP 193


>sp|ATGT_SULAC|TRNA-GUANINE(15) transglycosylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 TGHAELDTP 10
T H +L+TP
Sbjct: 21 TKHGKLETP 29


>sp|SURE_METBF|5'-NUCLEOTIDASE SurE|Methanosarcina barkeri (strain Fusaro /

Query: 4 HAELDTP 10
HAE DTP
Sbjct: 187 HAEEDTP 193


>sp|SYV_HALSA|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 TGHAELDTP 10
TGH + DTP
Sbjct: 590 TGHFDEDTP 598


>sp|SYV_HALS3|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 TGHAELDTP 10
TGH + DTP
Sbjct: 590 TGHFDEDTP 598


>sp|SYFB_HALMA|PHENYLALANINE--TRNA ligase beta subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 LTGHAELD 8
LTGH+E D
Sbjct: 14 LTGHSEKD 21


>sp|PURA_HALSA|ADENYLOSUCCINATE synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 4 HAELDTP 10
AELDTP
Sbjct: 413 EAELDTP 419


>sp|PURA_HALS3|ADENYLOSUCCINATE synthetase|Halobacterium salinarum (strain ATCC 29341

Query: 4 HAELDTP 10
AELDTP
Sbjct: 413 EAELDTP 419


>sp|MFNA_HALMA|PROBABLE L-aspartate decarboxylase|Haloarcula marismortui (strain ATCC 43049

Query: 3 GHAELDT 9
GHA++DT
Sbjct: 193 GHADIDT 199


>sp|Y1320_NATPD|PUTATIVE HTH-type transcriptional regulatory protein|Natronomonas pharaonis

Query: 1 LTGHAELD 8
LTGH+E +
Sbjct: 247 LTGHSEFN 254


>sp|EF1A_NANEQ|ELONGATION factor 1-alpha|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 GHAELDTP 10
H EL+TP
Sbjct: 76 AHTELETP 83


>sp|MRE11_AERPE|DNA double-strand break repair protein|Aeropyrum pernix (strain ATCC

Query: 1 LTGHAELDTP 10
L H E DTP
Sbjct: 80 LAAHGEHDTP 89


>sp|ARGB_METHJ|ACETYLGLUTAMATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LTGHAELDT 9
L GHA +DT
Sbjct: 26 LGGHAMVDT 34




62|SequenceR|315|306|QGPGFLTGHA

>sp|Y1085_PICTO|PUTATIVE adenine deaminase PTO1085|Picrophilus torridus (strain ATCC 700027

Query: 2 GPGFLTGHA 10
PG++ GHA
Sbjct: 94 APGYIEGHA 102


>sp|FPON_METMA|F(420)H(2) dehydrogenase subunit N|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QGPGFLTGH 9
Q PG LTG+
Sbjct: 196 QNPGLLTGN 204


>sp|R15PI_HALVD|RIBOSE 1,5-bisphosphate isomerase|Haloferax volcanii (strain ATCC 29605

Query: 3 PGFLTGH 9
PG +TGH
Sbjct: 238 PGTMTGH 244


>sp|Y382_METBU|UPF0758 protein Mbur_0382|Methanococcoides burtonii (strain DSM 6242

Query: 1 QGPGFLT 7
GPGFL+
Sbjct: 24 HGPGFLS 30


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GPGFLTGH 9
GP + TGH
Sbjct: 45 GPPYTTGH 52


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GPGFLTGH 9
GP + TGH
Sbjct: 46 GPPYTTGH 53


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GPGFLTGH 9
GP + TGH
Sbjct: 45 GPPYTTGH 52


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GPGFLTGH 9
GP + TGH
Sbjct: 46 GPPYTTGH 53


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GPGFLTGH 9
GP + TGH
Sbjct: 46 GPPYTTGH 53


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GPGFLTGH 9
GP + TGH
Sbjct: 46 GPPYTTGH 53


>sp|FAU1_METKA|PROBABLE ribonuclease FAU-1|Methanopyrus kandleri (strain AV19 /

Query: 1 QGPGFLTG 8
+GPGF G
Sbjct: 357 RGPGFYDG 364


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 PGFLTGHA 10
PG L GH
Sbjct: 303 PGMLLGHG 310


>sp|DPHB_PYRIL|DIPHTHINE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GPGFLTGHA 10
GPG++T A
Sbjct: 10 GPGYITERA 18


>sp|TPIS_METBU|TRIOSEPHOSPHATE isomerase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GPGFLTGHA 10
G G TGHA
Sbjct: 67 GAGSFTGHA 75


>sp|LYSY_CALMQ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 5 FLTGHA 10
F+TGHA
Sbjct: 246 FVTGHA 251




63|SequenceR|320|311|FFRTAQGPGF

>sp|SYG_METTP|GLYCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 FRTAQGPG 9
FRTA GPG
Sbjct: 144 FRTAIGPG 151


>sp|SYS_METAC|SERINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 FRTAQGPGF 10
FRT +GP F
Sbjct: 365 FRTPEGPQF 373


>sp|SYS_METBF|SERINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 FRTAQGPGF 10
FRT GP F
Sbjct: 364 FRTPDGPQF 372


>sp|Y1684_METTH|UNCHARACTERIZED protein MTH_1684|Methanothermobacter thermautotrophicus (strain

Query: 2 FRTAQGP 8
FRTA GP
Sbjct: 275 FRTAAGP 281


>sp|RFCL_METBF|REPLICATION factor C large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 FFRTAQGPG 9
FFRT PG
Sbjct: 439 FFRTPAPPG 447


>sp|SYS_METMA|SERINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FRTAQGPGF 10
+RT +GP F
Sbjct: 364 YRTPEGPQF 372


>sp|THIM_METLZ|HYDROXYETHYLTHIAZOLE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 RTAQGPG 9
+TA+GPG
Sbjct: 230 KTAKGPG 236


>sp|CSG2_HALHT|CELL surface glycoprotein 2|Haloarcula hispanica (strain ATCC 33960

Query: 5 AQGPGF 10
A+GPGF
Sbjct: 896 AEGPGF 901


>sp|CSG1_HALHT|CELL surface glycoprotein 1|Haloarcula hispanica (strain ATCC 33960

Query: 5 AQGPGF 10
A+GPGF
Sbjct: 892 AEGPGF 897


>sp|PUR2_METB6|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanoregula boonei (strain DSM 21154

Query: 1 FFRTAQGP 8
F TAQGP
Sbjct: 272 FMNTAQGP 279


>sp|TRKA_PYRHO|TRK system potassium uptake protein|Pyrococcus horikoshii (strain ATCC

Query: 2 FRTAQGPGF 10
FRT PGF
Sbjct: 133 FRTLVTPGF 141


>sp|TRKA_PYRAB|TRK system potassium uptake protein|Pyrococcus abyssi (strain GE5 /

Query: 2 FRTAQGPGF 10
FRT PGF
Sbjct: 133 FRTLVTPGF 141


>sp|RL4_METVS|LARGE ribosomal subunit protein uL4|Methanococcus vannielii (strain

Query: 3 RTAQGPG 9
RTAQG G
Sbjct: 72 RTAQGAG 78


>sp|RL4_METMP|LARGE ribosomal subunit protein uL4|Methanococcus maripaludis (strain

Query: 3 RTAQGPG 9
RTAQG G
Sbjct: 72 RTAQGAG 78


>sp|RL4_METM7|LARGE ribosomal subunit protein uL4|Methanococcus maripaludis (strain

Query: 3 RTAQGPG 9
RTAQG G
Sbjct: 72 RTAQGAG 78


>sp|RL4_METM5|LARGE ribosomal subunit protein uL4|Methanococcus maripaludis (strain

Query: 3 RTAQGPG 9
RTAQG G
Sbjct: 72 RTAQGAG 78


>sp|RL4_METM6|LARGE ribosomal subunit protein uL4|Methanococcus maripaludis (strain

Query: 3 RTAQGPG 9
RTAQG G
Sbjct: 72 RTAQGAG 78




64|SequenceR|325|316|QAPSPFFRTA

>sp|Y092_METJA|UNCHARACTERIZED iron-sulfur protein MJ0092|Methanocaldococcus jannaschii (strain

Query: 4 SPFFRTA 10
SPFFRT
Sbjct: 303 SPFFRTG 309


>sp|AROK_ARCFU|SHIKIMATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PSPFFR 8
P+PFFR
Sbjct: 271 PTPFFR 276


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 1 QAPSPFFRTA 10
Q+ P FRTA
Sbjct: 109 QSAEPVFRTA 118


>sp|DMSD_HALSA|PUTATIVE dimethyl sulfoxide reductase chaperone|Halobacterium salinarum

Query: 3 PSPFFRT 9
P PF+RT
Sbjct: 170 PKPFYRT 176


>sp|YPV4_METTF|UNCHARACTERIZED protein ORF4|Methanothermobacter thermautotrophicus

Query: 2 APSPFFRTA 10
APSPF T+
Sbjct: 139 APSPFAPTS 147


>sp|YPZ4_METTF|UNCHARACTERIZED protein ORF4'|Methanothermobacter thermautotrophicus

Query: 2 APSPFFRTA 10
APSPF T+
Sbjct: 139 APSPFAPTS 147




65|SequenceR|330|321|EWAGEQAPSP

>sp|AROE_METS3|SHIKIMATE dehydrogenase (NADP(+))|Methanobrevibacter smithii (strain ATCC

Query: 2 WAGEQAP 8
W GE+AP
Sbjct: 261 WTGEKAP 267


>sp|DNAG_STAMF|DNA primase DnaG|Staphylothermus marinus (strain ATCC 43588

Query: 1 EWAGEQAP 8
EW+ E+AP
Sbjct: 123 EWSKEKAP 130


>sp|THIC_HALSA|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 AGEQAPSP 10
A EQAPSP
Sbjct: 463 AAEQAPSP 470


>sp|THIC_HALS3|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 AGEQAPSP 10
A EQAPSP
Sbjct: 463 AAEQAPSP 470


>sp|TRPB2_ARCFU|TRYPTOPHAN synthase beta chain 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WAGEQAPSP 10
W GE PSP
Sbjct: 180 WGGEVIPSP 188


>sp|AROE_METKA|SHIKIMATE dehydrogenase (NADP(+))|Methanopyrus kandleri (strain AV19 /

Query: 2 WAGEQAP 8
W GE+AP
Sbjct: 271 WTGEEAP 277


>sp|PCNA_THEPD|DNA polymerase sliding clamp|Thermofilum pendens (strain DSM 2475

Query: 3 AGEQAPSP 10
AG++ PSP
Sbjct: 117 AGQELPSP 124


>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 WAGEQAPSP 10
W G + P P
Sbjct: 335 WEGSELPKP 343


>sp|SYR_METBU|ARGININE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EWAGEQA 7
EW GE+A
Sbjct: 316 EWKGERA 322


>sp|AROE_HALMA|SHIKIMATE dehydrogenase (NADP(+))|Haloarcula marismortui (strain ATCC 43049

Query: 2 WAGEQAP 8
W GE AP
Sbjct: 247 WTGEDAP 253


>sp|RPO1N_HALMO|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halococcus morrhuae (Micrococcus

Query: 1 EWAGEQA 7
E+AGEQA
Sbjct: 311 EFAGEQA 317


>sp|METXA_HALVD|HOMOSERINE O-acetyltransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 EWAGEQAPSP 10
++ GE+ PSP
Sbjct: 209 DYYGEERPSP 218


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 EWAGEQAP 8
++AGE+AP
Sbjct: 794 KYAGEKAP 801


>sp|GGGPS_METST|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 WAGEQAPSP 10
W G+ P P
Sbjct: 138 WVGDSKPIP 146


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 2 WAGEQAPS 9
W G+ PS
Sbjct: 413 WTGDNTPS 420


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 2 WAGEQAPS 9
W G+ PS
Sbjct: 413 WTGDNTPS 420


>sp|TRPB2_METMA|TRYPTOPHAN synthase beta chain 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 WAGEQAPSP 10
W G PSP
Sbjct: 187 WGGNVVPSP 195


>sp|TRPB2_METAC|TRYPTOPHAN synthase beta chain 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 WAGEQAPSP 10
W G PSP
Sbjct: 187 WGGNVVPSP 195


>sp|PURT_PYRHO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus horikoshii

Query: 2 WAGEQAPSP 10
WA E +P P
Sbjct: 285 WANEVSPRP 293


>sp|Y2021_HALSA|PUTATIVE heme-binding protein VNG_2021C|Halobacterium salinarum (strain ATCC

Query: 3 AGEQAPSP 10
AGE+ P+P
Sbjct: 253 AGERVPAP 260


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 2 WAGEQAPSP 10
WA E +P P
Sbjct: 285 WANEVSPRP 293


>sp|PURT_PYRAB|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus abyssi

Query: 2 WAGEQAPSP 10
WA E +P P
Sbjct: 285 WANEVSPRP 293




66|SequenceR|335|326|SSGQSEWAGE

>sp|DGGGP_IGNH4|DIGERANYLGERANYLGLYCERYL phosphate synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 SSGQSEWAGE 10
S +EWAGE
Sbjct: 148 SLATAEWAGE 157


>sp|RPO2C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanococcus vannielii (strain ATCC

Query: 2 SGQSEWA 8
SG+ EWA
Sbjct: 432 SGEGEWA 438


>sp|SAHH_THEKO|ADENOSYLHOMOCYSTEINASE kodakarensis (strain ATCC BAA-918

Query: 2 SGQSEWAG 9
+GQS W G
Sbjct: 192 TGQSTWDG 199


>sp|NTPTH_ARCFU|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SSGQSEW 7
SSG EW
Sbjct: 53 SSGNEEW 59


>sp|SAHH_PYRAB|ADENOSYLHOMOCYSTEINASE abyssi (strain GE5 /

Query: 2 SGQSEWAG 9
+GQS W G
Sbjct: 193 TGQSTWDG 200


>sp|SIHH_METAC|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 SGQSEWAG 9
+GQS W G
Sbjct: 185 TGQSAWDG 192


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 3 GQSEWA 8
GQS WA
Sbjct: 1059 GQSNWA 1064


>sp|SAHH_PYRFU|ADENOSYLHOMOCYSTEINASE furiosus (strain ATCC 43587

Query: 2 SGQSEWAG 9
+GQS W G
Sbjct: 192 TGQSTWDG 199


>sp|SAHH_PYRHO|ADENOSYLHOMOCYSTEINASE horikoshii (strain ATCC 700860

Query: 2 SGQSEWAG 9
+GQS W G
Sbjct: 192 TGQSTWDG 199


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 3 GQSEWA 8
GQS WA
Sbjct: 1203 GQSNWA 1208


>sp|SIHH_METMA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SGQSEWAG 9
+GQS W G
Sbjct: 185 TGQSAWDG 192


>sp|SAHH_PYRAE|ADENOSYLHOMOCYSTEINASE aerophilum (strain ATCC 51768

Query: 2 SGQSEWAG 9
+GQS W G
Sbjct: 209 TGQSTWDG 216


>sp|RPO2C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter

Query: 1 SSGQSEW 7
SSG+ EW
Sbjct: 82 SSGEMEW 88




67|SequenceR|340|331|DQSPFSSGQS

>sp|Y037_THEVO|UPF0215 protein TV0037|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DQSPFSSGQ 9
D SPF GQ
Sbjct: 27 DDSPFRRGQ 35


>sp|PMDHL_AERPE|PHOSPHOMEVALONATE dehydratase large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 3 SPFSSG 8
SPFSSG
Sbjct: 360 SPFSSG 365


>sp|SYC_METMP|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 QSPFSSGQ 9
+SPF SG+
Sbjct: 194 ESPFGSGR 201


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DQSPFSSGQ 9
D+ PF SG+
Sbjct: 756 DKDPFRSGR 764




68|SequenceR|345|336|LGLVPDQSPF

>sp|EF1A_METAR|ELONGATION factor 1-alpha|Methanocella arvoryzae (strain DSM 22066

Query: 1 LGLVPDQSPF 10
+G PDQ PF
Sbjct: 172 IGFKPDQIPF 181


>sp|RAD50_AERPE|DNA double-strand break repair Rad50|Aeropyrum pernix (strain ATCC

Query: 1 LGLVPDQSP 9
LG+ PD SP
Sbjct: 184 LGVSPDGSP 192


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LGLVPDQ 7
LG+VPDQ
Sbjct: 167 LGVVPDQ 173


>sp|SYE_METBF|GLUTAMATE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LGLVPDQ 7
LG+VPDQ
Sbjct: 167 LGVVPDQ 173


>sp|PANB_HYPBU|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 LGLVPDQSPF 10
LGL P PF
Sbjct: 223 LGLTPTPPPF 232


>sp|APGM_META3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus aeolicus (strain ATCC

Query: 1 LGLVPDQSPF 10
+G+VP+ PF
Sbjct: 223 VGMVPNIQPF 232


>sp|ENO_METST|ENOLASE stadtmanae (strain ATCC 43021

Query: 2 GLVPDQSPF 10
G++P Q PF
Sbjct: 128 GIMPTQIPF 136


>sp|HELS_PYRFU|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LGLVPDQSPF 10
+ L PD +PF
Sbjct: 519 ISLTPDITPF 528


>sp|PANB_IGNH4|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LGLVPDQSPF 10
LGL P PF
Sbjct: 220 LGLAPFSPPF 229


>sp|GLFT_THEAC|GLUTAMATE formimidoyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LGLVPDQS 8
+GLVP+Q+
Sbjct: 265 VGLVPEQA 272


>sp|MV3K_THEAC|MEVALONATE 3-kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LGLVPDQSP 9
LGL PD P
Sbjct: 120 LGLKPDLDP 128


>sp|Y1511_METMJ|UPF0316 protein Memar_1511|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LGLVPDQSP 9
LG+VPD P
Sbjct: 2 LGVVPDIDP 10


>sp|Y1199_ARCFU|UNCHARACTERIZED protein AF_1199|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LGLVPDQSPF 10
LG VP +P+
Sbjct: 35 LGAVPQAAPY 44


>sp|Y1552_ARCFU|UNCHARACTERIZED transporter AF_1552|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LGLVPDQSPF 10
LG+VP PF
Sbjct: 202 LGVVPTAVPF 211


>sp|Y453_METAC|UNCHARACTERIZED glycosyltransferase MA_0453|Methanosarcina acetivorans (strain ATCC

Query: 2 GLVPDQSP 9
G+VP+Q P
Sbjct: 246 GIVPEQFP 253


>sp|SUCD1_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Archaeoglobus fulgidus (strain

Query: 1 LGLVPDQS 8
+GL+PD+S
Sbjct: 138 VGLLPDRS 145


>sp|RPO5_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo5|Sulfolobus acidocaldarius (strain

Query: 1 LGLVPDQSPF 10
LG+ P+Q P+
Sbjct: 35 LGIKPEQLPW 44




69|SequenceR|350|341|RAPERLGLVP

>sp|Y1602_METBF|UNCHARACTERIZED protein Mbar_A1602|Methanosarcina barkeri (strain Fusaro /

Query: 4 ERLGLVP 10
E+LGLVP
Sbjct: 231 EKLGLVP 237


>sp|RPO3_PYRAR|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum arsenaticum (strain DSM

Query: 4 ERLGLVP 10
+RLGL+P
Sbjct: 61 QRLGLIP 67


>sp|HDRC1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit C|Methanosarcina acetivorans

Query: 1 RAPERLGL 8
R PE LGL
Sbjct: 31 RTPESLGL 38


>sp|HOSA_SACI7|HOMOCITRATE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 ERLGLVP 10
ER+G+VP
Sbjct: 230 ERVGIVP 236


>sp|HOSA_SACI6|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 ERLGLVP 10
ER+G+VP
Sbjct: 230 ERVGIVP 236


>sp|HOSA_SACI4|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 ERLGLVP 10
ER+G+VP
Sbjct: 230 ERVGIVP 236


>sp|HOSA_SACI3|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 ERLGLVP 10
ER+G+VP
Sbjct: 230 ERVGIVP 236


>sp|HOSA_SACI2|HOMOCITRATE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 ERLGLVP 10
ER+G+VP
Sbjct: 230 ERVGIVP 236


>sp|HOSA_SACI1|HOMOCITRATE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 ERLGLVP 10
ER+G+VP
Sbjct: 230 ERVGIVP 236


>sp|RPO3_PYRIL|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum islandicum (strain DSM

Query: 5 RLGLVP 10
RLGLVP
Sbjct: 62 RLGLVP 67


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 4 ERLGLVP 10
ERLG+VP
Sbjct: 502 ERLGVVP 508


>sp|HOSA_SACS2|HOMOCITRATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 ERLGLVP 10
ER+G+VP
Sbjct: 230 ERVGIVP 236


>sp|RPO3_HALMA|DNA-DIRECTED RNA polymerase subunit Rpo3|Haloarcula marismortui (strain ATCC

Query: 5 RLGLVP 10
RLGLVP
Sbjct: 65 RLGLVP 70


>sp|HOSA_SULTO|HOMOCITRATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 ERLGLVP 10
ER+G+VP
Sbjct: 229 ERVGIVP 235


>sp|RPO3_NATPD|DNA-DIRECTED RNA polymerase subunit Rpo3|Natronomonas pharaonis (strain ATCC

Query: 5 RLGLVP 10
RLGLVP
Sbjct: 65 RLGLVP 70


>sp|RPO3_METTH|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanothermobacter

Query: 5 RLGLVP 10
RLGLVP
Sbjct: 61 RLGLVP 66


>sp|RPO3_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo3|Halobacterium salinarum (strain ATCC

Query: 5 RLGLVP 10
RLGLVP
Sbjct: 66 RLGLVP 71


>sp|RPO3_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo3|Halobacterium salinarum (strain ATCC

Query: 5 RLGLVP 10
RLGLVP
Sbjct: 66 RLGLVP 71


>sp|Y277_SULAC|UPF0282 protein Saci_0277|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 APERLGLVP 10
AP R GL P
Sbjct: 36 APRRFGLPP 44


>sp|G1PDH_IGNH4|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 RAPERL 6
RAPERL
Sbjct: 159 RAPERL 164




70|SequenceR|355|346|MDREPRAPER

>sp|SYDND_HALVO|ASPARTATE--TRNA(ASP/ASN) ligase|Haloferax volcanii (Halobacterium volcanii)

Query: 1 MDREPRAP 8
+D EPRAP
Sbjct: 75 VDEEPRAP 82


>sp|KAD_PYRHO|ADENYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 MDREPRAPER 10
MD PR PE+
Sbjct: 81 MDGYPRTPEQ 90


>sp|KAD_PYRAB|ADENYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 MDREPRAPER 10
MD PR PE+
Sbjct: 81 MDGYPRTPEQ 90


>sp|DP2S_ARCFU|DNA polymerase II small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 3 REPRAPER 10
R P APER
Sbjct: 408 RTPLAPER 415


>sp|KAD_PYRFU|ADENYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MDREPRAPER 10
MD PR PE+
Sbjct: 81 MDGYPRTPEQ 90


>sp|SYN_THEVO|ASPARAGINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 MDREPRAP 8
M +EPR+P
Sbjct: 76 MKKEPRSP 83


>sp|PCNA_ARCFU|DNA polymerase sliding clamp|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 REPRAPE 9
+EPR PE
Sbjct: 118 KEPRIPE 124


>sp|TRUD_HALSA|PROBABLE tRNA pseudouridine synthase D|Halobacterium salinarum (strain ATCC

Query: 3 REPRAPER 10
R+P APER
Sbjct: 145 RDPDAPER 152


>sp|TRUD_HALS3|PROBABLE tRNA pseudouridine synthase D|Halobacterium salinarum (strain ATCC

Query: 3 REPRAPER 10
R+P APER
Sbjct: 145 RDPDAPER 152


>sp|TRM1_HALLT|TRNA (guanine(26)-N(2))-dimethyltransferase|Halorubrum lacusprofundi

Query: 2 DREPRA 7
DREPRA
Sbjct: 49 DREPRA 54


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 1 MDREPRAPER 10
M R P PER
Sbjct: 1 MSRSPSLPER 10




71|SequenceR|360|351|PSLEGMDREP

>sp|BACS1_HALMA|SENSORY rhodopsin I|Haloarcula marismortui (strain ATCC 43049

Query: 2 SLEGMDREP 10
SLEG D P
Sbjct: 28 SLEGSDERP 36


>sp|P5CR_METAC|PYRROLINE-5-CARBOXYLATE reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LEGMDRE 9
LEGMDR+
Sbjct: 193 LEGMDRK 199


>sp|ARLY_METTP|ARGININOSUCCINATE lyase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PSLEGMDR 8
PSLE +DR
Sbjct: 393 PSLEDLDR 400


>sp|SYH_PICTO|HISTIDINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 PSLEGMD 7
PSLE MD
Sbjct: 42 PSLESMD 48


>sp|SYS_STAMF|SERINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 PSLEGMDRE 9
P L+G+D+E
Sbjct: 62 PKLKGVDKE 70


>sp|RL6_PYRAE|LARGE ribosomal subunit protein uL6|Pyrobaculum aerophilum (strain ATCC

Query: 3 LEGMDRE 9
+EG+DRE
Sbjct: 144 IEGIDRE 150


>sp|ECFA_METMP|ENERGY-COUPLING factor transporter ATP-binding protein|Methanococcus maripaludis

Query: 2 SLEGMDREP 10
S+EG +R+P
Sbjct: 128 SMEGFERKP 136


>sp|CAPPA_SACI6|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PSLEGMDRE 9
P +EG DR+
Sbjct: 91 PKVEGADRK 99


>sp|CAPPA_SACI4|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PSLEGMDRE 9
P +EG DR+
Sbjct: 91 PKVEGADRK 99


>sp|CAPPA_SACI3|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 PSLEGMDRE 9
P +EG DR+
Sbjct: 91 PKVEGADRK 99


>sp|CAPPA_SACI1|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 PSLEGMDRE 9
P +EG DR+
Sbjct: 91 PKVEGADRK 99


>sp|CAPPA_SACS2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PSLEGMDRE 9
P +EG DR+
Sbjct: 91 PKVEGADRK 99


>sp|CAPPA_SACI7|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 PSLEGMDRE 9
P +EG DR+
Sbjct: 91 PKVEGADRK 99


>sp|CAPPA_SACI2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PSLEGMDRE 9
P +EG DR+
Sbjct: 91 PKVEGADRK 99


>sp|KADL_METTH|ADENYLATE kinase homolog MTH_1663|Methanothermobacter thermautotrophicus

Query: 3 LEGMDREP 10
L G+DR P
Sbjct: 85 LHGLDRSP 92


>sp|GLME_HALSA|GLUTAMATE mutase epsilon subunit|Halobacterium salinarum (strain ATCC 700922

Query: 2 SLEGMDRE 9
+L+G+DRE
Sbjct: 352 TLDGVDRE 359


>sp|EF1B_METKA|ELONGATION factor 1-beta|Methanopyrus kandleri (strain AV19 /

Query: 3 LEGMDREP 10
+EGM+ EP
Sbjct: 41 IEGMEEEP 48


>sp|DHE_HALSI|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (Halobacterium halobium)

Query: 3 LEGMDREP 10
LEG D EP
Sbjct: 268 LEGYDAEP 275


>sp|DHE_HALSA|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (strain ATCC 700922

Query: 3 LEGMDREP 10
LEG D EP
Sbjct: 268 LEGYDAEP 275


>sp|TRUD_NATPD|PROBABLE tRNA pseudouridine synthase D|Natronomonas pharaonis (strain ATCC

Query: 1 PSLEGMDREP 10
P L+G D EP
Sbjct: 114 PDLDGADIEP 123


>sp|SYFB_HALLT|PHENYLALANINE--TRNA ligase beta subunit|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 LEGMDREP 10
+EG+DR P
Sbjct: 200 VEGLDRYP 207




72|SequenceR|365|356|EQAVAPSLEG

>sp|ILVC3_SACS2|PUTATIVE ketol-acid reductoisomerase 3|Saccharolobus solfataricus (strain

Query: 1 EQAVAPSLEG 10
E+ +AP LEG
Sbjct: 88 EKKIAPILEG 97


>sp|ENO_METKA|ENOLASE kandleri (strain AV19 /

Query: 1 EQAVAPSLEG 10
E+ +AP +EG
Sbjct: 71 EEIIAPEIEG 80


>sp|IDI2_METMA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 VAPSLEG 10
V PSLEG
Sbjct: 297 VGPSLEG 303


>sp|IDI2_METAC|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 VAPSLEG 10
V PSLEG
Sbjct: 297 VGPSLEG 303


>sp|TRPA_NATPD|TRYPTOPHAN synthase alpha chain|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EQAVAPSLEG 10
+QAV SLEG
Sbjct: 58 QQAVVRSLEG 67




73|SequenceR|370|361|GPPTEEQAVA

>sp|BACH_NATPH|HALORHODOPSIN pharaonis (Natronobacterium pharaonis)

Query: 2 PPTEEQAVA 10
PP E AVA
Sbjct: 6 PPVTESAVA 14


>sp|SYT_NATPD|THREONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GPPTEE 6
GPPTEE
Sbjct: 97 GPPTEE 102


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 1 GPPTEEQAVA 10
G PTEE+ V+
Sbjct: 213 GEPTEEEEVS 222


>sp|RS3A_PYRAE|SMALL ribosomal subunit protein eS1|Pyrobaculum aerophilum (strain ATCC

Query: 2 PPTEEQAV 9
PP EEQ V
Sbjct: 203 PPEEEQIV 210


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 GPPTEEQAVA 10
G PTE+Q V+
Sbjct: 216 GEPTEQQEVS 225




74|SequenceR|375|366|GFLWDGPPTE

>sp|ACYP_METS5|ACYLPHOSPHATASE sedula (strain ATCC 51363

Query: 2 FLWDGPP 8
+LW GPP
Sbjct: 61 YLWKGPP 67


>sp|DHYS2_METAC|PROBABLE deoxyhypusine synthase 2|Methanosarcina acetivorans (strain ATCC

Query: 2 FLWDGP 7
F WDGP
Sbjct: 331 FFWDGP 336


>sp|DHYS2_METMA|PROBABLE deoxyhypusine synthase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FLWDGP 7
F WDGP
Sbjct: 331 FSWDGP 336


>sp|MTBA_METBA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina barkeri

Query: 3 LWDGPPTE 10
LW+G P E
Sbjct: 289 LWNGTPEE 296


>sp|PYRC_METTH|DIHYDROOROTASE thermautotrophicus (strain ATCC 29096

Query: 3 LWDGPP 8
+WD PP
Sbjct: 303 IWDAPP 308


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GFLWDGPP 8
GFL GPP
Sbjct: 503 GFLLYGPP 510


>sp|PSTK_METKA|L-SERYL-TRNA(SEC) kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 GFLWD 5
GFLWD
Sbjct: 42 GFLWD 46


>sp|Y1393_METJA|UNCHARACTERIZED protein MJ1393|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LWDGP 7
LWDGP
Sbjct: 220 LWDGP 224


>sp|SYS2_METTP|TYPE-2 serine--tRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 FLWDGPPTE 10
LW+ PP E
Sbjct: 171 LLWESPPRE 179


>sp|Y1349_METJA|UNCHARACTERIZED protein MJ1349|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FLWDGP 7
+LW GP
Sbjct: 170 YLWKGP 175


>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 GFLWDGPPT 9
GF GPPT
Sbjct: 323 GFTRYGPPT 331


>sp|SYR_METTP|ARGININE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 FLWDGPPTE 10
F+WDG E
Sbjct: 254 FVWDGSVDE 262


>sp|FEN_METTP|FLAP endonuclease 1|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GFLWDGPPTE 10
F++DG P E
Sbjct: 76 AFVFDGTPPE 85


>sp|FEN_SULAC|FLAP endonuclease 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 FLWDGPPTE 10
F++DG P E
Sbjct: 77 FVFDGKPPE 85


>sp|FEN_METMA|FLAP endonuclease 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FLWDGPPTE 10
F++DG P E
Sbjct: 77 FVFDGKPPE 85


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 4 WDGPPTE 10
WDGP +
Sbjct: 152 WDGPAVQ 158


>sp|MTRH_METM5|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus maripaludis (strain

Query: 3 LWDGP 7
+WDGP
Sbjct: 94 VWDGP 98


>sp|FEN_ARCFU|FLAP endonuclease 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FLWDGPPTE 10
F++DG P E
Sbjct: 77 FVFDGEPPE 85


>sp|MTRH_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus maripaludis (strain

Query: 3 LWDGP 7
+WDGP
Sbjct: 94 VWDGP 98


>sp|FNO_METTM|F420-DEPENDENT NADP reductase|Methanothermobacter marburgensis (strain ATCC

Query: 3 LWDGPPTE 10
LWDG E
Sbjct: 116 LWDGSAAE 123


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 FLWDGP 7
F+WD P
Sbjct: 742 FIWDPP 747


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 WDGPPTE 10
WDGP +
Sbjct: 368 WDGPSVQ 374


>sp|MTRH_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanocaldococcus jannaschii

Query: 3 LWDGP 7
+WDGP
Sbjct: 94 VWDGP 98


>sp|UVRC_HALSA|UVRABC system protein C|Halobacterium salinarum (strain ATCC 700922

Query: 4 WDGP 7
WDGP
Sbjct: 479 WDGP 482


>sp|UVRC_HALS3|UVRABC system protein C|Halobacterium salinarum (strain ATCC 29341

Query: 4 WDGP 7
WDGP
Sbjct: 479 WDGP 482


>sp|Y1804_AERPE|UNCHARACTERIZED protein APE_1804|Aeropyrum pernix (strain ATCC 700893

Query: 6 GPPTE 10
GPPTE
Sbjct: 13 GPPTE 17


>sp|MAAL_HALMA|METHYLASPARTATE ammonia-lyase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GFLWDGPPT 9
GF +DG P
Sbjct: 31 GFAYDGQPV 39


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GFLWDGPPTE 10
GFL+D P E
Sbjct: 323 GFLYDQKPLE 332


>sp|PURL_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GFLWDGPP 8
GFL DG P
Sbjct: 367 GFLADGAP 374


>sp|Y946_ARCFU|UNCHARACTERIZED protein AF_0946|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 WDGPPTE 10
WD PTE
Sbjct: 242 WDFTPTE 248


>sp|Y1787_METS5|UPF0201 protein Msed_1787|Metallosphaera sedula (strain ATCC 51363

Query: 3 LWDGPPTE 10
LWD P E
Sbjct: 135 LWDNPMPE 142


>sp|FEN_METMJ|FLAP endonuclease 1|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 FLWDGPPTE 10
F++DG P E
Sbjct: 78 FVFDGKPPE 86


>sp|PGP_HALSA|PHOSPHOGLYCOLATE phosphatase|Halobacterium salinarum (strain ATCC 700922

Query: 4 WDGP 7
WDGP
Sbjct: 34 WDGP 37


>sp|PGP_HALS3|PHOSPHOGLYCOLATE phosphatase|Halobacterium salinarum (strain ATCC 29341

Query: 4 WDGP 7
WDGP
Sbjct: 34 WDGP 37


>sp|SYT_HALWD|THREONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GFLWDGPPTE 10
G WDGP +
Sbjct: 474 GRQWDGPTVQ 483




75|SequenceR|380|371|GWRVGGFLWD

>sp|AMPD_PYRHO|ANHYDROMEVALONATE phosphate decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GWRVGGFLW 9
GW V G LW
Sbjct: 48 GWEVAGNLW 56


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 2 WRVGGFLWD 10
+R+GG +WD
Sbjct: 337 FRLGGVVWD 345


>sp|NTPTH_METJA|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GWRVGGFL 8
G++VGGF+
Sbjct: 28 GYKVGGFI 35


>sp|TRUA_METKA|TRNA pseudouridine synthase A|Methanopyrus kandleri (strain AV19 /

Query: 3 RVGGFLWD 10
R+ GF+W+
Sbjct: 174 RIAGFVWE 181


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 GWRVGGFLW 9
GW + F+W
Sbjct: 773 GWDLALFMW 781


>sp|TRUD_PYRNV|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum neutrophilum (strain

Query: 3 RVGGFLW 9
RVGG+ W
Sbjct: 56 RVGGWTW 62


>sp|TRUD_PYRAR|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum arsenaticum (strain DSM

Query: 3 RVGGFLW 9
RVGG+ W
Sbjct: 56 RVGGWTW 62


>sp|Y1589_METJA|UNCHARACTERIZED protein MJ1589|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GWRVGG 6
GW VGG
Sbjct: 102 GWYVGG 107


>sp|Y3680_PYRAE|UPF0282 protein PAE3680|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 WRVGG 6
WRVGG
Sbjct: 142 WRVGG 146


>sp|UREE_NATPD|UREASE accessory protein UreE|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GWRVGGFLWD 10
G RVG WD
Sbjct: 107 GHRVGNQHWD 116


>sp|NTPTH_AERPE|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Aeropyrum pernix (strain ATCC 700893

Query: 1 GWRVGGFL 8
G R+GGF+
Sbjct: 45 GCRLGGFM 52


>sp|NIFD_METBA|NITROGENASE molybdenum-iron protein alpha chain|Methanosarcina barkeri

Query: 2 WRVGGFLWD 10
+ +GG LW+
Sbjct: 225 YNIGGDLWE 233


>sp|Y1056_PYRAR|UPF0282 protein Pars_1056|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 WRVGG 6
WR+GG
Sbjct: 142 WRIGG 146




76|SequenceR|385|376|CRFNWGWRVG

>sp|EF2_METMT|ELONGATION factor 2|Methanococcoides methylutens

Query: 2 RFNWGWRV 9
R+N GWRV
Sbjct: 186 RYNQGWRV 193


>sp|EF2_METBU|ELONGATION factor 2|Methanococcoides burtonii (strain DSM 6242

Query: 2 RFNWGWRV 9
R+N GWRV
Sbjct: 186 RYNAGWRV 193


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 2 RFNWGWR 8
R+N GWR
Sbjct: 344 RYNEGWR 350


>sp|KDGK_THEAC|2-DEHYDRO-3-DEOXYGLUCONOKINASE acidophilum (strain ATCC 25905

Query: 2 RFN-WGWRVG 10
RF WGW +G
Sbjct: 141 RFGGWGWFIG 150


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CRFNWGW 7
CRF+ GW
Sbjct: 549 CRFHRGW 555


>sp|FSX1_UNCAX|FUSEXIN 1|Uncultured archaeon

Query: 3 FNWGWRVG 10
F GWR+G
Sbjct: 237 FENGWRIG 244


>sp|MRE11_PYRFU|DNA double-strand break repair protein|Pyrococcus furiosus (strain ATCC

Query: 2 RFNWGWR 8
R N GWR
Sbjct: 303 RLNIGWR 309


>sp|TSR3_METMA|16S rRNA aminocarboxypropyltransferase|Methanosarcina mazei (strain

Query: 2 RFNWG 6
+FNWG
Sbjct: 138 KFNWG 142


>sp|TSR3_METBU|16S rRNA aminocarboxypropyltransferase|Methanococcoides burtonii

Query: 2 RFNWG 6
+FNWG
Sbjct: 138 KFNWG 142


>sp|TSR3_METBF|16S rRNA aminocarboxypropyltransferase|Methanosarcina barkeri (strain

Query: 2 RFNWG 6
+FNWG
Sbjct: 138 KFNWG 142


>sp|TSR3_METAC|16S rRNA aminocarboxypropyltransferase|Methanosarcina acetivorans

Query: 2 RFNWG 6
+FNWG
Sbjct: 139 KFNWG 143


>sp|MFNC_METJA|(5-FORMYLFURAN-3-YL)METHYL phosphate transaminase|Methanocaldococcus jannaschii (strain ATCC

Query: 6 GWRVG 10
GWR+G
Sbjct: 228 GWRIG 232


>sp|AAT_METJA|PROBABLE aspartate aminotransferase|Methanocaldococcus jannaschii (strain

Query: 6 GWRVG 10
GWR+G
Sbjct: 229 GWRIG 233


>sp|ALAXL_PYRHO|ALANYL-TRNA editing protein AlaX-L|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 FNWGWRVG 10
+W WR G
Sbjct: 92 LDWEWRYG 99


>sp|Y2028_ARCFU|UNCHARACTERIZED protein AF_2028|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 NWGWRVG 10
N+GW VG
Sbjct: 392 NYGWGVG 398


>sp|RL22_AERPE|LARGE ribosomal subunit protein uL22|Aeropyrum pernix (strain ATCC

Query: 5 WGWRVG 10
WGW VG
Sbjct: 79 WGWPVG 84


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FNWGWRVG 10
FN GW+ G
Sbjct: 605 FNNGWKEG 612


>sp|ARFB_METVM|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanocaldococcus vulcanius (strain

Query: 4 NWGWRVG 10
NWG ++G
Sbjct: 92 NWGKKIG 98


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain ATCC

Query: 1 CRFNW 5
C FNW
Sbjct: 240 CPFNW 244


>sp|RL30_PYRNV|LARGE ribosomal subunit protein uL30|Pyrobaculum neutrophilum (strain

Query: 5 WGWR 8
WGWR
Sbjct: 94 WGWR 97


>sp|NNRE_NITMS|NAD(P)H-HYDRATE epimerase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 NWGWRV 9
NW W +
Sbjct: 93 NWNWSI 98


>sp|Y1039_PYRHO|UNCHARACTERIZED ABC transporter extracellular-binding protein|Pyrococcus horikoshii

Query: 3 FNWGW 7
F WGW
Sbjct: 108 FMWGW 112


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 3 FNWGWRVG 10
FN+ W +G
Sbjct: 462 FNYKWNLG 469




77|SequenceR|390|381|GVPPKCRFNW

>sp|NPD_SULTO|NAD-DEPENDENT protein deacetylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GVPPKC 6
G+PPKC
Sbjct: 144 GLPPKC 149


>sp|PUR7_ARCFU|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 1 GVPPKCRFNW 10
G P +CRF++
Sbjct: 238 GTPDECRFSF 247


>sp|Y966_METJA|UNCHARACTERIZED protein MJ0966|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GVPPKCRF 8
G P +CRF
Sbjct: 177 GCPRRCRF 184


>sp|SYE_METJA|GLUTAMATE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GVPPKCR 7
GVP KCR
Sbjct: 200 GVPCKCR 206


>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 PKCRF 8
PKCRF
Sbjct: 704 PKCRF 708


>sp|SYE_METVS|GLUTAMATE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GVPPKCR 7
G+P KCR
Sbjct: 202 GIPCKCR 208


>sp|SYE_METM7|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 GVPPKCR 7
G+P KCR
Sbjct: 202 GIPCKCR 208


>sp|SYE_METM6|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 GVPPKCR 7
G+P KCR
Sbjct: 202 GIPCKCR 208


>sp|Y487_THEAC|PROTEIN Ta0487|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VPPKCR 7
+PP CR
Sbjct: 119 IPPSCR 124


>sp|PDAD2_ARCFU|PYRUVOYL-DEPENDENT arginine decarboxylase 2|Archaeoglobus fulgidus (strain ATCC

Query: 2 VPPKCR 7
VPP CR
Sbjct: 45 VPPGCR 50


>sp|Y932_METKA|UNCHARACTERIZED protein MK0932|Methanopyrus kandleri (strain AV19 /

Query: 1 GVPPKCRF 8
G+PP C F
Sbjct: 215 GIPPGCGF 222


>sp|HELS_THEVO|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GVPPKCRFN 9
G P K RFN
Sbjct: 400 GKPEKVRFN 408


>sp|SYE_METMP|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GVPPKCR 7
G+P KCR
Sbjct: 202 GLPCKCR 208


>sp|Y1199_ARCFU|UNCHARACTERIZED protein AF_1199|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PPKCR 7
PP+CR
Sbjct: 3 PPRCR 7


>sp|MPTN_METMP|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GVPPKC 6
GVP KC
Sbjct: 217 GVPEKC 222


>sp|HDLB_ARCPA|HETERODISULFIDE reductase subunit B-like protein|Archaeoglobus profundus (strain

Query: 1 GVPPKCRFNW 10
V P C F W
Sbjct: 150 AVQPGCHFLW 159


>sp|RPO3_PYRAR|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum arsenaticum (strain DSM

Query: 3 PPKCRFN 9
P KC FN
Sbjct: 188 PVKCTFN 194


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VPPKCRFNW 10
+ PK +++W
Sbjct: 252 IKPKIKYSW 260




78|SequenceR|395|386|TRPNLGVPPK

>sp|HFLX_THEPD|GTPASE HflX|Thermofilum pendens (strain DSM 2475

Query: 4 NLGVPP 9
NLGVPP
Sbjct: 301 NLGVPP 306


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PNLGVPP 9
PN G+PP
Sbjct: 725 PNRGLPP 731


>sp|Y1292_METJA|UNCHARACTERIZED protein MJ1292|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PNLGVPPK 10
PN+ VPPK
Sbjct: 204 PNVYVPPK 211


>sp|CBID_METTH|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanothermobacter thermautotrophicus

Query: 1 TRPNLGVPP 9
T+P L VPP
Sbjct: 102 TKPGLQVPP 110


>sp|CDC6_PICTO|ORC1-TYPE DNA replication protein|Picrophilus torridus (strain ATCC 700027

Query: 3 PNLGVP 8
PNLG+P
Sbjct: 117 PNLGLP 122


>sp|SYT_CALMQ|THREONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 PNLGVPPK 10
PNL PPK
Sbjct: 85 PNLAPPPK 92


>sp|TRUB_METTH|PROBABLE tRNA pseudouridine synthase B|Methanothermobacter

Query: 1 TRPNLGVPP 9
T P+ G PP
Sbjct: 17 TNPDYGCPP 25


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PNLGVPP 9
PN+ +PP
Sbjct: 748 PNIDIPP 754


>sp|Y778_METJA|UNCHARACTERIZED protein MJ0778|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 LGVPPK 10
LG+PPK
Sbjct: 104 LGLPPK 109


>sp|TRPA_SACS2|TRYPTOPHAN synthase alpha chain|Saccharolobus solfataricus (strain ATCC

Query: 5 LGVPPK 10
LG+PPK
Sbjct: 38 LGIPPK 43


>sp|RFCL_METM7|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C7 /

Query: 2 RPNLGVPPK 10
RP + PPK
Sbjct: 440 RPKISEPPK 448


>sp|RFCL_METMP|REPLICATION factor C large subunit|Methanococcus maripaludis (strain DSM 14266

Query: 2 RPNLGVPPK 10
RP + PPK
Sbjct: 440 RPRISEPPK 448


>sp|TRPA_SULAC|TRYPTOPHAN synthase alpha chain|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 LGVPPK 10
+G+PPK
Sbjct: 37 IGIPPK 42


>sp|CBID_PYRAE|COBALT-PRECORRIN-5B C(1)-methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 TRPNLGVPP 9
TRP L VPP
Sbjct: 101 TRPGLPVPP 109


>sp|CRTD_HALJT|CAROTENOID 3,4-desaturase|Haloarcula japonica (strain ATCC 49778

Query: 1 TRPNLGVP 8
T P +GVP
Sbjct: 470 TTPGIGVP 477


>sp|TRUB_PYRFU|PROBABLE tRNA pseudouridine synthase B|Pyrococcus furiosus (strain ATCC

Query: 1 TRPNLGVPPK 10
T P+ G PP+
Sbjct: 27 TNPDWGFPPE 36


>sp|CAPPA_METTH|PHOSPHOENOLPYRUVATE carboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 NLGVPPK 10
+LGVPP+
Sbjct: 383 SLGVPPE 389




79|SequenceR|400|391|LGEPGTRPNL

>sp|RPO1C_META3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus aeolicus (strain ATCC

Query: 1 LGEPGTR 7
LGEPGT+
Sbjct: 68 LGEPGTQ 74


>sp|RPO1C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanocaldococcus jannaschii

Query: 1 LGEPGTRPNL 10
+GEPGT+ +L
Sbjct: 68 IGEPGTQMSL 77


>sp|RPO1C_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Sulfurisphaera tokodaii (strain DSM

Query: 1 LGEPGTRPNL 10
+GEPGT+ L
Sbjct: 75 IGEPGTQMTL 84


>sp|RPO1C_AERPE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Aeropyrum pernix (strain ATCC 700893

Query: 1 LGEPGTRPNL 10
+GEPGT+ L
Sbjct: 71 IGEPGTQMTL 80


>sp|AHBD_METBF|ADOMET-DEPENDENT heme synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GEPGTRPNL 10
GEP TRP++
Sbjct: 64 GEPLTRPDV 72


>sp|RPO1C_METS5|DNA-DIRECTED RNA polymerase subunit Rpo1C|Metallosphaera sedula (strain ATCC

Query: 1 LGEPGTRPNL 10
+GEPGT+ L
Sbjct: 75 IGEPGTQMTL 84


>sp|MOAA_PYRFU|PROBABLE GTP 3',8-cyclase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GEPGTRPNL 10
GEP RP++
Sbjct: 65 GEPTVRPDI 73


>sp|RPO1C_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Sulfolobus acidocaldarius (strain

Query: 1 LGEPGTRPNL 10
+GEPGT+ L
Sbjct: 76 VGEPGTQMTL 85


>sp|RPO1C_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus shibatae (strain ATCC

Query: 1 LGEPGTRPNL 10
+GEPGT+ L
Sbjct: 75 VGEPGTQMTL 84


>sp|RPO1C_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus solfataricus (strain

Query: 1 LGEPGTRPNL 10
+GEPGT+ L
Sbjct: 75 VGEPGTQMTL 84


>sp|RPO1C_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 LGEPGTRPNL 10
+GEPGT+ L
Sbjct: 75 VGEPGTQMTL 84


>sp|RPO1C_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 LGEPGTRPNL 10
+GEPGT+ L
Sbjct: 75 VGEPGTQMTL 84


>sp|RPO1C_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 LGEPGTRPNL 10
+GEPGT+ L
Sbjct: 75 VGEPGTQMTL 84


>sp|RPO1C_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 LGEPGTRPNL 10
+GEPGT+ L
Sbjct: 75 VGEPGTQMTL 84


>sp|RPO1C_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 LGEPGTRPNL 10
+GEPGT+ L
Sbjct: 75 VGEPGTQMTL 84


>sp|RPO1C_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 LGEPGTRPNL 10
+GEPGT+ L
Sbjct: 75 VGEPGTQMTL 84


>sp|CAS6_HALMT|CRISPR-ASSOCIATED endoribonuclease Cas6|Haloferax mediterranei (strain ATCC 33500

Query: 1 LGEPGTR 7
+GEPGTR
Sbjct: 109 VGEPGTR 115


>sp|RPO1C_METM7|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C7

Query: 1 LGEPGTR 7
+GEPGT+
Sbjct: 68 IGEPGTQ 74


>sp|RPO1C_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma volcanium (strain ATCC

Query: 1 LGEPGTR 7
+GEPGT+
Sbjct: 191 IGEPGTQ 197


>sp|RPO1C_METM6|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C6

Query: 1 LGEPGTR 7
+GEPGT+
Sbjct: 68 IGEPGTQ 74


>sp|RPO1C_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrobaculum aerophilum (strain ATCC

Query: 1 LGEPGTR 7
+GEPGT+
Sbjct: 65 IGEPGTQ 71


>sp|RPO1C_METAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina acetivorans (strain

Query: 1 LGEPGTR 7
+GEPGT+
Sbjct: 67 IGEPGTQ 73


>sp|RPO1C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus vannielii (strain ATCC

Query: 1 LGEPGTR 7
+GEPGT+
Sbjct: 68 IGEPGTQ 74


>sp|RPO1C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Archaeoglobus fulgidus (strain ATCC

Query: 1 LGEPGTR 7
+GEPGT+
Sbjct: 67 IGEPGTQ 73


>sp|RPO1C_METM5|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C5

Query: 1 LGEPGTR 7
+GEPGT+
Sbjct: 68 IGEPGTQ 74


>sp|RPO1C_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma acidophilum (strain ATCC

Query: 1 LGEPGTR 7
+GEPGT+
Sbjct: 191 IGEPGTQ 197


>sp|RPO1C_METMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina mazei (strain ATCC

Query: 1 LGEPGTR 7
+GEPGT+
Sbjct: 70 IGEPGTQ 76


>sp|RPO1C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halobacterium salinarum (strain ATCC

Query: 1 LGEPGTR 7
+GEPGT+
Sbjct: 71 IGEPGTQ 77


>sp|RPO1C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halobacterium salinarum (strain ATCC

Query: 1 LGEPGTR 7
+GEPGT+
Sbjct: 71 IGEPGTQ 77


>sp|RPO1C_METMP|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain

Query: 1 LGEPGTR 7
+GEPGT+
Sbjct: 68 IGEPGTQ 74


>sp|RPO1C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanothermobacter thermautotrophicus

Query: 1 LGEPGTR 7
+GEPGT+
Sbjct: 140 VGEPGTQ 146


>sp|RPO1C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanothermobacter thermautotrophicus

Query: 1 LGEPGTR 7
+GEPGT+
Sbjct: 140 VGEPGTQ 146


>sp|RPO1C_HALMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Haloarcula marismortui (strain ATCC

Query: 1 LGEPGTR 7
+GEPGT+
Sbjct: 71 IGEPGTQ 77


>sp|HPRT_METTP|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothrix thermoacetophila (strain

Query: 2 GEPGTRPNL 10
G P TRP L
Sbjct: 30 GVPETRPEL 38


>sp|RPO1C_HALMO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halococcus morrhuae (Micrococcus

Query: 1 LGEPGTR 7
+GEPGT+
Sbjct: 69 IGEPGTQ 75


>sp|K6PF_THEZI|ADP-SPECIFIC phosphofructokinase|Thermococcus zilligii

Query: 3 EPGTRPNL 10
EPG RP L
Sbjct: 208 EPGLRPFL 215


>sp|PYRF_PYRFU|OROTIDINE 5'-phosphate decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PGTRP 8
PGTRP
Sbjct: 139 PGTRP 143


>sp|LONB_THEVO|ARCHAEAL Lon protease|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LGEPGT 6
+GEPGT
Sbjct: 56 IGEPGT 61


>sp|IF2G_HALWD|TRANSLATION initiation factor 2 subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LGEPGTRP 8
+GEPGT P
Sbjct: 313 VGEPGTLP 320


>sp|PYRF_PYRHO|OROTIDINE 5'-phosphate decarboxylase|Pyrococcus horikoshii (strain ATCC

Query: 4 PGTRP 8
PGTRP
Sbjct: 139 PGTRP 143


>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LGEPGT 6
+GEPGT
Sbjct: 56 IGEPGT 61


>sp|IF2G_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 LGEPGTRPN 9
+ +PGTRP+
Sbjct: 222 VNKPGTRPS 230


>sp|PYRF_PYRAB|OROTIDINE 5'-phosphate decarboxylase|Pyrococcus abyssi (strain GE5 /

Query: 4 PGTRP 8
PGTRP
Sbjct: 139 PGTRP 143


>sp|MFNA_PYRHO|L-ASPARTATE/L-GLUTAMATE decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LGEPGTRP 8
LG+PG P
Sbjct: 56 LGDPGLHP 63


>sp|MFNA_PYRAB|PROBABLE L-aspartate decarboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 LGEPGTRP 8
LG+PG P
Sbjct: 57 LGDPGLHP 64


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LGEPGT 6
+GEPGT
Sbjct: 58 IGEPGT 63


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 1 LGEPGT 6
+GEPGT
Sbjct: 68 IGEPGT 73


>sp|MFNA_PYRFU|PROBABLE L-aspartate decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LGEPGTRP 8
LG+PG P
Sbjct: 56 LGDPGLHP 63


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 1 LGEPGTR 7
+GEPG R
Sbjct: 646 IGEPGKR 652


>sp|LONB_THEKO|ARCHAEAL Lon protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LGEPGT 6
+GEPGT
Sbjct: 64 IGEPGT 69


>sp|CARB1_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 1 LGEPGTRPN 9
+GEPG P+
Sbjct: 400 IGEPGLGPS 408


>sp|Y516_AERPE|UPF0113 protein APE_0516.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 LGEPGTRPNL 10
+GE G RP+L
Sbjct: 81 IGERGFRPSL 90




80|SequenceR|405|396|PSSYPLGEPG

>sp|Y378_NANEQ|UPF0173 metal-dependent hydrolase NEQ378|Nanoarchaeum equitans (strain

Query: 3 SYPLGEPG 10
+YPLG PG
Sbjct: 107 AYPLGNPG 114


>sp|TYSY_METJA|PUTATIVE thymidylate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PSSYPLGE 8
P YPLGE
Sbjct: 54 PEKYPLGE 61


>sp|SYFA_THEVO|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PSSYPLGEP 9
PS YP EP
Sbjct: 401 PSYYPYTEP 409


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 1 PSSYPLGEPG 10
P+ P+GEPG
Sbjct: 357 PTPSPVGEPG 366


>sp|ACDG_METJA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanocaldococcus

Query: 1 PSSYPLGEP 9
P YP+G P
Sbjct: 353 PGLYPIGNP 361


>sp|SYFA_THEAC|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PSSYPLGEP 9
PS YP EP
Sbjct: 407 PSYYPYTEP 415


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PSSYPLGE 8
PS+ PLGE
Sbjct: 1070 PSTAPLGE 1077


>sp|CUTA_SULAC|GLYCERALDEHYDE dehydrogenase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 1 PSSYPLGEPG 10
PS+YP G G
Sbjct: 696 PSNYPTGTKG 705


>sp|SYW2_HALSA|TRYPTOPHAN--TRNA ligase 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 SSYPLGEPG 10
+ YP+G+PG
Sbjct: 226 ARYPVGKPG 234


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PSSYPLGEP 9
P +PLG P
Sbjct: 519 PEGHPLGTP 527


>sp|FTR_METBF|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PSSYPLGEPG 10
PS P G PG
Sbjct: 62 PSETPDGRPG 71


>sp|FTR_METAC|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PSSYPLGEPG 10
PS P G PG
Sbjct: 62 PSETPDGRPG 71


>sp|CAH_METJA|PROBABLE carbonic anhydrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PSSYPLGEPG 10
P+S LG PG
Sbjct: 118 PNSLVLGVPG 127


>sp|FTR_METMA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PSSYPLGEPG 10
PS P G PG
Sbjct: 62 PSETPDGRPG 71


>sp|FTR_ARCFU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PSSYPLGEPG 10
PS P G PG
Sbjct: 62 PSETPDGRPG 71


>sp|FTR_METJA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PSSYPLGEPG 10
PS P G PG
Sbjct: 62 PSKTPDGRPG 71


>sp|PUR1_ARCFU|AMIDOPHOSPHORIBOSYLTRANSFERASE fulgidus (strain ATCC 49558

Query: 2 SSYPLGEPG 10
S YP+ PG
Sbjct: 444 SKYPVSVPG 452




81|SequenceR|410|401|AEGNDPSSYP

>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 AEGNDPSSY 9
AEGND SY
Sbjct: 856 AEGNDKLSY 864


>sp|RS7_DESMO|SMALL ribosomal subunit protein uS7|Desulfurococcus mucosus

Query: 1 AEGNDPSSY 9
A NDP SY
Sbjct: 174 AASNDPKSY 182


>sp|FTTA_METTH|TRANSCRIPTION termination factor FttA|Methanothermobacter thermautotrophicus

Query: 1 AEGNDPSSYP 10
A G+D +SYP
Sbjct: 214 AGGDDKNSYP 223


>sp|RPO10_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo10|Thermoplasma acidophilum (strain

Query: 1 AEGNDPS 7
AEG DPS
Sbjct: 30 AEGRDPS 36


>sp|HOSA_SULTO|HOMOCITRATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 NDPSSY 9
NDPS+Y
Sbjct: 297 NDPSTY 302


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 4 NDPSSYP 10
+DPSS+P
Sbjct: 374 DDPSSFP 380


>sp|RS7_CALMQ|SMALL ribosomal subunit protein uS7|Caldivirga maquilingensis (strain

Query: 1 AEGNDPSSY 9
A NDP+SY
Sbjct: 200 AANNDPASY 208


>sp|RS7_PYRAE|SMALL ribosomal subunit protein uS7|Pyrobaculum aerophilum (strain ATCC

Query: 1 AEGNDPSSY 9
A NDP SY
Sbjct: 199 AAANDPKSY 207


>sp|Y374_METJA|UNCHARACTERIZED protein MJ0374|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EGNDPS 7
EGN+PS
Sbjct: 251 EGNEPS 256


>sp|RS7_PYRNV|SMALL ribosomal subunit protein uS7|Pyrobaculum neutrophilum (strain DSM

Query: 1 AEGNDPSSY 9
A NDP SY
Sbjct: 200 AAANDPKSY 208


>sp|RS7_DESA1|SMALL ribosomal subunit protein uS7|Desulfurococcus amylolyticus (strain

Query: 4 NDPSSY 9
NDP SY
Sbjct: 177 NDPKSY 182


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 EGNDPSSYP 10
E DPS YP
Sbjct: 784 EWPDPSEYP 792


>sp|DMSB_HALSA|PUTATIVE dimethyl sulfoxide reductase iron-sulfur|Halobacterium salinarum

Query: 2 EGNDPSSY 9
+G DPS+Y
Sbjct: 199 KGTDPSTY 206


>sp|Y3697_METBF|UPF0280 protein Mbar_A3697|Methanosarcina barkeri (strain Fusaro /

Query: 4 NDPSSYP 10
N+P+S+P
Sbjct: 10 NEPASFP 16




82|SequenceR|415|406|SPDLIAEGND

>sp|RL10_HALSA|LARGE ribosomal subunit protein uL10|Halobacterium salinarum (strain ATCC

Query: 1 SPDLIAEGN 9
+PDLIA+G
Sbjct: 241 APDLIAKGR 249


>sp|RL10_HALS3|LARGE ribosomal subunit protein uL10|Halobacterium salinarum (strain ATCC

Query: 1 SPDLIAEGN 9
+PDLIA+G
Sbjct: 241 APDLIAKGR 249


>sp|DAPA_METPE|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 SPDLIAE 7
SPDL+AE
Sbjct: 145 SPDLVAE 151


>sp|FAU1_PYRCJ|PROBABLE ribonuclease FAU-1|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PDLIAEGN 9
PD+I EG+
Sbjct: 142 PDIIVEGD 149


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 SPDLIAEG 8
+PDL AEG
Sbjct: 979 TPDLEAEG 986


>sp|OFOA2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Sulfurisphaera tokodaii (strain DSM

Query: 3 DLIAEGND 10
D+I EGN+
Sbjct: 273 DMIVEGNE 280


>sp|SYK_HALMA|LYSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 DLIAEGND 10
D IAEG+D
Sbjct: 479 DFIAEGHD 486


>sp|RADA_METVO|DNA repair and recombination protein|Methanococcus voltae

Query: 3 DLIAEGND 10
DLI EGN+
Sbjct: 197 DLIQEGNN 204


>sp|RIBL_HALTV|FAD synthase|Haloterrigena turkmenica (strain ATCC 51198

Query: 2 PDLIAEGND 10
PD+IA G+D
Sbjct: 85 PDVIALGHD 93


>sp|RIBL_NATMM|FAD synthase|Natrialba magadii (strain ATCC 43099

Query: 2 PDLIAEGND 10
PD+IA G+D
Sbjct: 89 PDVIALGHD 97


>sp|HMDH_PYRHO|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SPDLIAEGN 9
+P+LIAE N
Sbjct: 270 TPELIAEVN 278


>sp|KAE1B_METVS|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 DLIAEGN 9
DLI EGN
Sbjct: 436 DLIEEGN 442


>sp|HMDH_PYRAB|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus abyssi (strain GE5 /

Query: 1 SPDLIAEGN 9
+P+LIAE N
Sbjct: 265 TPELIAEVN 273


>sp|HIS8_THEGJ|HISTIDINOL-PHOSPHATE aminotransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 SPDLIAEGN 9
SPD +A GN
Sbjct: 71 SPDNVAVGN 79


>sp|TOP6B_METBF|TYPE 2 DNA topoisomerase 6|Methanosarcina barkeri (strain Fusaro /

Query: 2 PDLIAEG 8
PDL+ EG
Sbjct: 600 PDLVVEG 606


>sp|DNAG_PYRIL|DNA primase DnaG|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PDLIAEGND 10
PD +A ND
Sbjct: 343 PDFLANSND 351


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 DLIAEGND 10
DL+ EG+D
Sbjct: 489 DLVLEGHD 496


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 DLIAEGND 10
DL+ EG+D
Sbjct: 549 DLVLEGHD 556


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 DLIAEGND 10
DL+ EG+D
Sbjct: 552 DLVLEGHD 559


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 DLIAEGND 10
DL+ EG+D
Sbjct: 552 DLVLEGHD 559


>sp|MTAD_NATPD|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PDLIAE 7
PDLIAE
Sbjct: 189 PDLIAE 194


>sp|RIBL_METBU|FAD synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 SPDLIAEGND 10
+PD+I G+D
Sbjct: 83 NPDIIVLGHD 92


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 DLIAEGND 10
DL+ EG+D
Sbjct: 549 DLVLEGHD 556


>sp|T2MT_METTF|TYPE II restriction enzyme MthTI|Methanothermobacter

Query: 2 PDLIAEGND 10
PD+I +G D
Sbjct: 74 PDMILKGGD 82


>sp|RRP4_SULTO|EXOSOME complex component Rrp4|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 DLIAEGN 9
DLIAEG+
Sbjct: 18 DLIAEGD 24




83|SequenceR|420|411|PRPAQSPDLI

>sp|CDC61_METMA|ORC1-TYPE DNA replication protein 1|Methanosarcina mazei (strain ATCC

Query: 2 RPAQSPDLI 10
RP+ +PDL+
Sbjct: 28 RPSYTPDLL 36


>sp|CDC61_METAC|ORC1-TYPE DNA replication protein 1|Methanosarcina acetivorans (strain ATCC

Query: 2 RPAQSPDLI 10
RP+ +PDL+
Sbjct: 28 RPSYTPDLL 36


>sp|TRPD_METM6|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 2 RPAQSPD 8
RP +SPD
Sbjct: 251 RPCESPD 257


>sp|CCA_PYRNV|CCA-ADDING enzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PRPAQSPDLI 10
P P +SPD++
Sbjct: 280 PYPGESPDVV 289


>sp|ILVE_ARCFU|PUTATIVE branched-chain-amino-acid aminotransferase|Archaeoglobus fulgidus

Query: 1 PRPAQSPDLI 10
PR Q+P +I
Sbjct: 103 PRKCQNPSII 112


>sp|CCA_PYRAE|CCA-ADDING enzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PRPAQSPDLI 10
P P + PD++
Sbjct: 283 PYPGEPPDIV 292




84|SequenceR|425|416|CPENFPRPAQ

>sp|GLPK_THEON|GLYCEROL kinase|Thermococcus onnurineus (strain NA1)

Query: 2 PENFPRPA 9
P+++PRP
Sbjct: 35 PQHYPRPG 42


>sp|GLPK_THEKO|GLYCEROL kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PENFPRPA 9
P+++PRP
Sbjct: 35 PQHYPRPG 42


>sp|Y3697_METBF|UPF0280 protein Mbar_A3697|Methanosarcina barkeri (strain Fusaro /

Query: 1 CPENFP 6
CPEN P
Sbjct: 71 CPENAP 76


>sp|FRHB_METTH|COENZYME F420 hydrogenase subunit beta|Methanothermobacter

Query: 1 CPENFP 6
C ENFP
Sbjct: 134 CMENFP 139


>sp|Y1715_METAC|UPF0280 protein MA_1715|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 CPENFP 6
CPEN P
Sbjct: 71 CPENAP 76


>sp|COFG_METMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 ENFPRPA 9
ENFP PA
Sbjct: 209 ENFPEPA 215


>sp|FRHB_METJA|COENZYME F420 hydrogenase subunit beta|Methanocaldococcus jannaschii (strain

Query: 1 CPENFP 6
C ENFP
Sbjct: 139 CMENFP 144


>sp|TRUD_HALMA|PROBABLE tRNA pseudouridine synthase D|Haloarcula marismortui (strain ATCC

Query: 2 PENFPRP 8
PE+FP P
Sbjct: 337 PEDFPIP 343


>sp|FRHB_METBF|COENZYME F420 hydrogenase subunit beta|Methanosarcina barkeri (strain Fusaro

Query: 1 CPENFP 6
C ENFP
Sbjct: 138 CMENFP 143


>sp|Y2648_METMA|UPF0280 protein MM_2648|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CPENFP 6
CPEN P
Sbjct: 74 CPENAP 79


>sp|Y277_SULAC|UPF0282 protein Saci_0277|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PENFPRPAQ 10
P+NF P+Q
Sbjct: 100 PQNFINPSQ 108




85|SequenceR|430|421|RGPYKCPENF

>sp|Y3697_METBF|UPF0280 protein Mbar_A3697|Methanosarcina barkeri (strain Fusaro /

Query: 3 PYKCPEN 9
PY+CPEN
Sbjct: 68 PYECPEN 74


>sp|Y1715_METAC|UPF0280 protein MA_1715|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PYKCPEN 9
PY+CPEN
Sbjct: 68 PYECPEN 74


>sp|Y2648_METMA|UPF0280 protein MM_2648|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PYKCPEN 9
PY+CPEN
Sbjct: 71 PYECPEN 77


>sp|RL30E_METB6|LARGE ribosomal subunit protein eL30|Methanoregula boonei (strain DSM

Query: 6 CPENF 10
CPENF
Sbjct: 41 CPENF 45


>sp|TRPD_METST|ANTHRANILATE phosphoribosyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 2 GPYKCPEN 9
GP CP N
Sbjct: 181 GPISCPTN 188


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PYKCPENF 10
PY+ PE F
Sbjct: 369 PYEVPEKF 376


>sp|MUTL_METLZ|DNA mismatch repair protein MutL|Methanocorpusculum labreanum (strain

Query: 1 RGPYKCP 7
+ PY CP
Sbjct: 561 KSPYTCP 567


>sp|DAPAL_THEON|UNCHARACTERIZED DapA-like lyase TON_0506|Thermococcus onnurineus (strain NA1)

Query: 3 PYKCPEN 9
PY CP N
Sbjct: 103 PYYCPLN 109


>sp|Y1674_METAR|UPF0280 protein UNCMA_16740|Methanocella arvoryzae (strain DSM 22066

Query: 3 PYKCPEN 9
PY+CP +
Sbjct: 60 PYECPAD 66


>sp|TF2B1_HALSA|TRANSCRIPTION initiation factor IIB 1|Halobacterium salinarum (strain ATCC

Query: 3 PYKCPE 8
P++CPE
Sbjct: 4 PHRCPE 9


>sp|PURL_IGNH4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 RGPYKCPE 8
+GP+K PE
Sbjct: 638 KGPWKRPE 645


>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GPYKCP 7
G YKCP
Sbjct: 457 GTYKCP 462


>sp|PYRH_METBF|URIDYLATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GPYKCPE 8
GP CPE
Sbjct: 84 GPDACPE 90


>sp|CYSC_AERPE|PROBABLE adenylyl-sulfate kinase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PYKCPEN 9
PY+ PEN
Sbjct: 149 PYEPPEN 155


>sp|MPGS_PYRHO|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PYKCP 7
P+KCP
Sbjct: 75 PHKCP 79


>sp|MPGS_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PYKCP 7
P+KCP
Sbjct: 75 PHKCP 79


>sp|MPGS_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 PYKCP 7
P+KCP
Sbjct: 75 PHKCP 79


>sp|CCA_METMP|CCA-ADDING enzyme|Methanococcus maripaludis (strain DSM 14266

Query: 4 YKCPEN 9
Y CPEN
Sbjct: 427 YVCPEN 432


>sp|TSR3_METJA|16S rRNA aminocarboxypropyltransferase|Methanocaldococcus jannaschii

Query: 1 RGPYKCPEN 9
+ PYK P+N
Sbjct: 35 KNPYKVPKN 43


>sp|IF2A_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 RGPYKCPENF 10
R P +C E F
Sbjct: 114 RNPEECKEQF 123


>sp|RF1_PICTO|PEPTIDE chain release factor subunit|Picrophilus torridus (strain ATCC

Query: 4 YKCPENF 10
YKC NF
Sbjct: 119 YKCDSNF 125


>sp|PUR2_METJA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GPYKCPEN 9
G Y CP++
Sbjct: 237 GSYSCPDH 244


>sp|PURL_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanopyrus kandleri (strain AV19 /

Query: 3 PYKCPEN 9
PY PEN
Sbjct: 368 PYSYPEN 374


>sp|AROC_AERPE|CHORISMATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 RGPYKCPE 8
R P KCP+
Sbjct: 181 RDPLKCPD 188


>sp|SYK_PYRFU|LYSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 YKCPE 8
Y+CPE
Sbjct: 197 YRCPE 201


>sp|SYK_PYRHO|LYSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 YKCPE 8
YKCPE
Sbjct: 197 YKCPE 201


>sp|SYK_PYRAB|LYSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 YKCPE 8
Y+CPE
Sbjct: 197 YRCPE 201


>sp|RS21_THEKO|SMALL ribosomal subunit protein aS21|Thermococcus kodakarensis (strain

Query: 3 PYKCPE 8
PYKCP+
Sbjct: 51 PYKCPK 56


>sp|Y264_METJA|UNCHARACTERIZED protein MJ0264|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YKCPEN 9
Y CPEN
Sbjct: 59 YACPEN 64


>sp|CCA_METM7|CCA-ADDING enzyme|Methanococcus maripaludis (strain C7 /

Query: 4 YKCPEN 9
Y CPEN
Sbjct: 427 YVCPEN 432


>sp|CCA_METM5|CCA-ADDING enzyme|Methanococcus maripaludis (strain C5 /

Query: 4 YKCPEN 9
Y CPEN
Sbjct: 427 YVCPEN 432




86|SequenceR|435|426|GFGKTRGPYK

>sp|DHE_HALSI|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (Halobacterium halobium)

Query: 2 FGKTRGPYK 10
F RGPYK
Sbjct: 61 FDSARGPYK 69


>sp|DHE_HALSA|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (strain ATCC 700922

Query: 2 FGKTRGPYK 10
F RGPYK
Sbjct: 61 FDSARGPYK 69


>sp|MOAA_HALWD|PROBABLE GTP 3',8-cyclase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GFGKTRGP 8
G G TRGP
Sbjct: 32 GLGDTRGP 39


>sp|MOAA_HALSA|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GFGKTRGP 8
G G TRGP
Sbjct: 32 GLGDTRGP 39


>sp|MOAA_HALS3|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GFGKTRGP 8
G G TRGP
Sbjct: 32 GLGDTRGP 39


>sp|PANB_PYRIL|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 FGKTRGPY 9
F K RGPY
Sbjct: 9 FAKGRGPY 16


>sp|THIM_PYRAB|HYDROXYETHYLTHIAZOLE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 FGKTRG 7
FGKTRG
Sbjct: 131 FGKTRG 136


>sp|Y886_METTH|UNCHARACTERIZED protein MTH_886|Methanothermobacter thermautotrophicus (strain

Query: 2 FGKTRGPY 9
FG TR PY
Sbjct: 45 FGPTRNPY 52


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GFGKTRGP 8
G GKTR P
Sbjct: 652 GIGKTRKP 659


>sp|DPO4_METAC|DNA polymerase IV|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 FGKTRGPY 9
FGK+RG +
Sbjct: 227 FGKSRGTW 234


>sp|SYR_HALWD|ARGININE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 5 TRGPY 9
TRGPY
Sbjct: 84 TRGPY 88


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 1 GFGKTRGPY 9
G GKTR Y
Sbjct: 265 GIGKTRAIY 273


>sp|DHE2_HALSI|NAD-SPECIFIC glutamate dehydrogenase A|Halobacterium salinarum (Halobacterium

Query: 6 RGPYK 10
RGPYK
Sbjct: 86 RGPYK 90


>sp|DPO41_METMA|DNA polymerase IV 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FGKTRGPY 9
FGK+RG +
Sbjct: 226 FGKSRGTW 233


>sp|DHEB_HALSI|GLUTAMATE dehydrogenase B|Halobacterium salinarum (Halobacterium halobium)

Query: 6 RGPYK 10
RGPYK
Sbjct: 79 RGPYK 83


>sp|DHEB_HALSA|GLUTAMATE dehydrogenase B|Halobacterium salinarum (strain ATCC 700922

Query: 6 RGPYK 10
RGPYK
Sbjct: 79 RGPYK 83


>sp|GATA_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 2 FGKTRGPY 9
FG TR P+
Sbjct: 131 FGPTRNPW 138


>sp|GATA_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Sulfurisphaera tokodaii (strain DSM

Query: 2 FGKTRGPY 9
FG TR P+
Sbjct: 128 FGPTRNPW 135


>sp|GATA_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 1 GFGKTRGPY 9
FG TR P+
Sbjct: 136 AFGPTRNPW 144


>sp|RL3_HALWD|LARGE ribosomal subunit protein uL3|Haloquadratum walsbyi (strain DSM

Query: 1 GFGKTRGPY 9
G+G+ GPY
Sbjct: 287 GYGEVDGPY 295


>sp|FPOD_METMA|F(420)H(2) dehydrogenase subunit D|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 KTRGPY 9
K RGPY
Sbjct: 334 KVRGPY 339


>sp|Y1954_ARCFU|PUTATIVE amidase AF_1954|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FGKTRGPY 9
FG TR P+
Sbjct: 126 FGPTRNPW 133


>sp|RL3_METMJ|LARGE ribosomal subunit protein uL3|Methanoculleus marisnigri (strain

Query: 2 FGKTRGPY 9
+G RGPY
Sbjct: 287 YGLVRGPY 294




87|SequenceR|440|431|LGPKHGFGKT

>sp|ASSY_ARCFU|ARGININOSUCCINATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LGPKHGFGKT 10
+G KHG G+T
Sbjct: 241 IGGKHGVGRT 250


>sp|MCH_HALSA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GPKHGFG 8
GP H FG
Sbjct: 291 GPTHAFG 297


>sp|MCH_HALS3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Halobacterium salinarum (strain ATCC 29341

Query: 2 GPKHGFG 8
GP H FG
Sbjct: 291 GPTHAFG 297


>sp|COBY_METJA|ADENOSYLCOBINAMIDE-PHOSPHATE guanylyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LGPKHGFGK 9
+ PKHG+ K
Sbjct: 157 VSPKHGYQK 165


>sp|TRUA_METBU|TRNA pseudouridine synthase A|Methanococcoides burtonii (strain DSM 6242

Query: 1 LGPKHGFG 8
L P HG+G
Sbjct: 213 LEPAHGYG 220


>sp|BIOF_META3|PUTATIVE 8-amino-7-oxononanoate synthase|Methanococcus aeolicus (strain

Query: 2 GPKHGFGKT 10
G K+GFG T
Sbjct: 58 GLKYGFGST 66


>sp|CCA_METKA|CCA-ADDING enzyme|Methanopyrus kandleri (strain AV19 /

Query: 5 HGFGK 9
HGFGK
Sbjct: 432 HGFGK 436


>sp|ARSS_METTH|ARCHAETIDYLSERINE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 HGFGK 9
HGFGK
Sbjct: 67 HGFGK 71


>sp|Y1105_METKA|PUTATIVE nickel insertion protein|Methanopyrus kandleri (strain AV19 /

Query: 5 HGFGK 9
HGFGK
Sbjct: 282 HGFGK 286


>sp|PYRC_AERPE|DIHYDROOROTASE pernix (strain ATCC 700893

Query: 2 GPKHGFGK 9
GP H +GK
Sbjct: 257 GPTHSWGK 264


>sp|RL4_ARCFU|LARGE ribosomal subunit protein uL4|Archaeoglobus fulgidus (strain ATCC

Query: 2 GPKHGFGK 9
GP HG+ +
Sbjct: 62 GPGHGYAR 69


>sp|NIFH2_METTL|NITROGENASE iron protein 2|Methanothermococcus thermolithotrophicus

Query: 2 GPKHGFG 8
GPK G+G
Sbjct: 99 GPKPGYG 105


>sp|ASRAC_PYRHO|ALANINE/SERINE racemase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LGPKHGFG 8
L PK GFG
Sbjct: 54 LVPKRGFG 61


>sp|G6PI_METMP|PROBABLE glucose-6-phosphate isomerase|Methanococcus maripaludis (strain DSM

Query: 4 KHGFGKT 10
K+GFG+T
Sbjct: 284 KNGFGQT 290


>sp|AGCS_METMP|SODIUM/ALANINE symporter AgcS|Methanococcus maripaludis (strain DSM 14266

Query: 3 PKHGFGK 9
P HG GK
Sbjct: 142 PDHGLGK 148


>sp|KATG_METAC|CATALASE-PEROXIDASE acetivorans (strain ATCC 35395

Query: 5 HGFGKT 10
H FGKT
Sbjct: 265 HAFGKT 270




88|SequenceR|445|436|APHKKLGPKH

>sp|DEOC_AERPE|DEOXYRIBOSE-PHOSPHATE aldolase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PHKKLGPK 9
PH LGP+
Sbjct: 110 PHLSLGPE 117


>sp|PYRI_KORCO|ASPARTATE carbamoyltransferase regulatory chain|Korarchaeum cryptofilum

Query: 2 PHKKLGPK 9
P KKLG K
Sbjct: 48 PSKKLGKK 55


>sp|PRIS_NITMS|DNA primase small subunit PriS|Nitrosopumilus maritimus (strain SCM1)

Query: 3 HKKLGPKH 10
+KK GP H
Sbjct: 343 NKKFGPYH 350


>sp|RL22_METTH|LARGE ribosomal subunit protein uL22|Methanothermobacter

Query: 1 APHKKLGPKH 10
A H K+ PKH
Sbjct: 21 ATHLKISPKH 30


>sp|RFCL_NANEQ|REPLICATION factor C large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 KKLGPKH 10
K+L PKH
Sbjct: 186 KRLSPKH 192




89|SequenceR|450|441|GGPPAAPHKK

>sp|PIMT_IGNH4|PROTEIN-L-ISOASPARTATE O-methyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GGPPAAPHKK 10
G PPAAP+ K
Sbjct: 138 GYPPAAPYDK 147


>sp|COBD_METTP|PROBABLE cobalamin biosynthesis protein CobD|Methanothrix thermoacetophila

Query: 1 GGPPAAPH 8
G PPAA H
Sbjct: 22 GEPPAALH 29


>sp|ACYP_SACS2|ACYLPHOSPHATASE solfataricus (strain ATCC 35092

Query: 2 GPPAAPHKK 10
GPPAA +K
Sbjct: 75 GPPAAEVEK 83


>sp|Y142_AERPE|UNCHARACTERIZED HTH-type transcriptional regulator APE_0142|Aeropyrum pernix

Query: 1 GGPPAAPHKK 10
G P PHKK
Sbjct: 135 GEPKYCPHKK 144


>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GPPAAPHKK 10
GPP PH K
Sbjct: 120 GPPEDPHAK 128


>sp|PURL_PYRNV|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 GPPAAPHKK 10
GPP PH +
Sbjct: 120 GPPEDPHAR 128


>sp|Y1618_METJA|UNCHARACTERIZED protein MJ1618|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PPAAPHK 9
PP PHK
Sbjct: 91 PPKTPHK 97


>sp|AATB_METPE|A-TYPE ATP synthase subunit B|Methanosphaerula palustris (strain ATCC

Query: 1 GGPPAAPHKK 10
GGP P K+
Sbjct: 97 GGPEIVPEKR 106


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GPPAAPHKK 10
GPP+ PH +
Sbjct: 120 GPPSHPHAR 128


>sp|AATB_METB6|A-TYPE ATP synthase subunit B|Methanoregula boonei (strain DSM 21154

Query: 1 GGPPAAPHKK 10
GGP P K+
Sbjct: 97 GGPEIVPEKR 106


>sp|AATB_METMJ|A-TYPE ATP synthase subunit B|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GGPPAAPHKK 10
GGP P K+
Sbjct: 97 GGPDIVPEKR 106


>sp|AATB1_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GGPPAAPHKK 10
GGP P K+
Sbjct: 97 GGPDIVPEKR 106




90|SequenceR|455|446|CTFPRGGPPA

>sp|RF1_METVS|PEPTIDE chain release factor subunit|Methanococcus vannielii (strain ATCC

Query: 4 PRGGP 8
PRGGP
Sbjct: 96 PRGGP 100


>sp|RF1_METTH|PEPTIDE chain release factor subunit|Methanothermobacter thermautotrophicus

Query: 4 PRGGP 8
PRGGP
Sbjct: 96 PRGGP 100


>sp|RF1_METS3|PEPTIDE chain release factor subunit|Methanobrevibacter smithii (strain

Query: 4 PRGGP 8
PRGGP
Sbjct: 96 PRGGP 100


>sp|RF1_METMP|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain DSM

Query: 4 PRGGP 8
PRGGP
Sbjct: 96 PRGGP 100


>sp|RF1_METM7|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C7 /

Query: 4 PRGGP 8
PRGGP
Sbjct: 96 PRGGP 100


>sp|RF1_METM6|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C6 /

Query: 4 PRGGP 8
PRGGP
Sbjct: 96 PRGGP 100


>sp|RF1_METM5|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C5 /

Query: 4 PRGGP 8
PRGGP
Sbjct: 96 PRGGP 100


>sp|Y034_METJA|IRON-SULFUR cluster assembly SufBD family|Methanocaldococcus jannaschii (strain

Query: 1 CTFPRG 6
C+FP+G
Sbjct: 108 CSFPKG 113


>sp|Y179_ARCFU|UNCHARACTERIZED protein AF_0179|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FPRGG 7
FPRGG
Sbjct: 128 FPRGG 132


>sp|ILVD_IGNH4|DIHYDROXY-ACID dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 PRGGP 8
PRGGP
Sbjct: 433 PRGGP 437


>sp|DPHB_PYRIL|DIPHTHINE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 TFPRGG 7
T+PRGG
Sbjct: 134 TYPRGG 139


>sp|DPHB_PYRCJ|DIPHTHINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 CTFPRGG 7
T+PRGG
Sbjct: 133 VTYPRGG 139


>sp|DPHB_PYRAE|DIPHTHINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 TFPRGG 7
T+PRGG
Sbjct: 134 TYPRGG 139


>sp|DPHB_PYRNV|DIPHTHINE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 CTFPRGG 7
T+PRGG
Sbjct: 133 VTYPRGG 139


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 1 CTFPRGG 7
C FP GG
Sbjct: 592 CLFPVGG 598




91|SequenceR|460|451|KGCTACTFPR

>sp|Y274_METJA|UNCHARACTERIZED protein MJ0274|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GCTACTFPR 10
GC+ CT PR
Sbjct: 224 GCSFCTEPR 232


>sp|PUS10_METST|TRNA pseudouridine synthase Pus10|Methanosphaera stadtmanae (strain ATCC

Query: 1 KGCTACTF 8
KGC AC +
Sbjct: 190 KGCEACDY 197


>sp|NIFE_METMP|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 2 GCTACTF 8
GC ACT+
Sbjct: 98 GCAACTW 104


>sp|NIFE_METMI|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 2 GCTACTF 8
GC ACT+
Sbjct: 98 GCAACTW 104


>sp|RL6_METM7|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 6 CTFPR 10
CTFPR
Sbjct: 57 CTFPR 61


>sp|RL6_METM6|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 6 CTFPR 10
CTFPR
Sbjct: 57 CTFPR 61


>sp|RL6_METM5|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 6 CTFPR 10
CTFPR
Sbjct: 57 CTFPR 61


>sp|NIFE_METTM|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 2 GCTACTF 8
GC ACT+
Sbjct: 91 GCAACTW 97


>sp|RPO3_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermoplasma volcanium (strain ATCC

Query: 1 KGCTACT 7
KGC+ CT
Sbjct: 96 KGCSLCT 102


>sp|RPO3_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermoplasma acidophilum (strain ATCC

Query: 1 KGCTACT 7
KGC+ CT
Sbjct: 96 KGCSLCT 102


>sp|PUS10_METV3|TRNA pseudouridine synthase Pus10|Methanococcus voltae (strain ATCC

Query: 1 KGCTACTF 8
KGC C F
Sbjct: 292 KGCEKCNF 299


>sp|NIFE_METTH|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 2 GCTACTF 8
GC ACT+
Sbjct: 88 GCAACTW 94


>sp|IDI2_METTP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 CTACTF 8
CT CTF
Sbjct: 45 CTECTF 50


>sp|THIC_PYRAE|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KGCTAC 6
KGCT C
Sbjct: 408 KGCTMC 413


>sp|ISF3_ARCFU|IRON-SULFUR flavoprotein AF_1896|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KGCTAC 6
KGC AC
Sbjct: 47 KGCDAC 52


>sp|CCA_METM7|CCA-ADDING enzyme|Methanococcus maripaludis (strain C7 /

Query: 1 KGCTACTF 8
KGC C +
Sbjct: 391 KGCNVCAY 398


>sp|CCA_METM5|CCA-ADDING enzyme|Methanococcus maripaludis (strain C5 /

Query: 1 KGCTACTF 8
KGC C +
Sbjct: 391 KGCNVCAY 398


>sp|RUBY_METJA|PUTATIVE rubrerythrin|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CTACTFPR 10
C +C+ PR
Sbjct: 187 CPSCSHPR 194


>sp|RL37_METJA|LARGE ribosomal subunit protein eL37|Methanocaldococcus jannaschii

Query: 1 KGCTACTFP 9
K C AC FP
Sbjct: 33 KRCAACGFP 41


>sp|CAS4_AERPE|CRISPR-ASSOCIATED exonuclease Cas4|Aeropyrum pernix (strain ATCC 700893

Query: 1 KGCTACTFPR 10
+ C AC F R
Sbjct: 177 RKCVACRFRR 186


>sp|PUS10_ARCFU|TRNA pseudouridine synthase Pus10|Archaeoglobus fulgidus (strain ATCC

Query: 1 KGCTACTF 8
+GC C F
Sbjct: 145 EGCEVCNF 152


>sp|PUS10_NITMS|TRNA pseudouridine synthase Pus10|Nitrosopumilus maritimus (strain SCM1)

Query: 1 KGCTACTF 8
KGC C F
Sbjct: 184 KGCRICDF 191


>sp|PUS10_METJA|TRNA pseudouridine synthase Pus10|Methanocaldococcus jannaschii (strain

Query: 1 KGCTACTF 8
KGC C +
Sbjct: 233 KGCELCNY 240


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 1 KGCTAC 6
+GCT C
Sbjct: 598 RGCTIC 603


>sp|HAC8_HALAS|PRE-PROTEIN-C8 sp. (strain AS7092)

Query: 2 GCTACTF 8
GC+AC +
Sbjct: 213 GCSACKY 219


>sp|RL37_METBU|LARGE ribosomal subunit protein eL37|Methanococcoides burtonii (strain

Query: 1 KGCTACTFPR 10
K CT+C F R
Sbjct: 32 KQCTSCGFGR 41


>sp|MCRAM_METAC|[METHYL coenzyme M reductase]-L-arginine

Query: 1 KGCTACT 7
KGC CT
Sbjct: 43 KGCDYCT 49




92|SequenceR|465|456|QLQFSKGCTA

***** No hits found ******


93|SequenceR|470|461|ASLSVQLQFS

***** No hits found ******


94|SequenceR|475|466|CSRQHASLSV

>sp|LEUD1_PYRFU|3-ISOPROPYLMALATE dehydratase small subunit 1|Pyrococcus furiosus (strain ATCC

Query: 2 SRQHASLSV 10
SR+HA L++
Sbjct: 66 SREHAPLAI 74


>sp|LEUD1_PYRAB|3-ISOPROPYLMALATE dehydratase small subunit 1|Pyrococcus abyssi (strain GE5 /

Query: 2 SRQHASLSV 10
SR+HA L++
Sbjct: 66 SREHAPLAI 74




95|SequenceR|480|471|GDPAGCSRQH

>sp|AATE_THEPD|A-TYPE ATP synthase subunit E|Thermofilum pendens (strain DSM 2475

Query: 1 GDPAGCS 7
GDP GC+
Sbjct: 167 GDPLGCT 173


>sp|GLNA_METVO|GLUTAMINE synthetase|Methanococcus voltae

Query: 1 GDPAGCSRQ 9
GDP GC ++
Sbjct: 112 GDPRGCLKR 120


>sp|GLNA_METMP|GLUTAMINE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GDPAGCSRQ 9
GDP GC ++
Sbjct: 111 GDPRGCLKR 119


>sp|EF1A_THEPD|ELONGATION factor 1-alpha|Thermofilum pendens (strain DSM 2475

Query: 3 PAGCSRQH 10
PAG +R+H
Sbjct: 129 PAGQTREH 136


>sp|ATRMA_PYRHO|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 1 GDPAGCSRQH 10
G GCS QH
Sbjct: 65 GRCGGCSLQH 74


>sp|DAPA_METTH|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GDPAGC 6
G PAGC
Sbjct: 276 GTPAGC 281


>sp|HIS4_METB6|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanoregula boonei (strain

Query: 1 GDPAGCSRQ 9
GDP C+R+
Sbjct: 29 GDPLTCARR 37


>sp|GGR3_METST|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 3|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GDPAGC 6
GD AGC
Sbjct: 282 GDAAGC 287




96|SequenceR|485|476|TGPGSGDPAG

>sp|SRP54_HYPBU|SIGNAL recognition particle 54 kDa|Hyperthermus butylicus (strain DSM 5456

Query: 3 PGSGDPAG 10
PGS DP G
Sbjct: 160 PGSKDPVG 167


>sp|DAPAL_HALSA|UNCHARACTERIZED DapA-like lyase VNG_0444G|Halobacterium salinarum (strain ATCC

Query: 2 GPGSGDPAG 10
PGSGDP G
Sbjct: 7 APGSGDPLG 15


>sp|DAPAL_HALS3|UNCHARACTERIZED DapA-like lyase OE_1665R|Halobacterium salinarum (strain ATCC

Query: 2 GPGSGDPAG 10
PGSGDP G
Sbjct: 7 APGSGDPLG 15


>sp|METXA_METLZ|HOMOSERINE O-acetyltransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 TGPGSGDPA 9
TGP S DPA
Sbjct: 102 TGPSSEDPA 110


>sp|KVAP_AERPE|VOLTAGE-GATED potassium channel|Aeropyrum pernix (strain ATCC 700893

Query: 5 SGDPAG 10
SGDPAG
Sbjct: 93 SGDPAG 98


>sp|METXA_METZD|HOMOSERINE O-acetyltransferase|Methanosalsum zhilinae (strain DSM 4017

Query: 1 TGPGSGDP 8
TGP S DP
Sbjct: 104 TGPSSIDP 111


>sp|METXA_METBU|HOMOSERINE O-acetyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 TGPGSGDP 8
TGP S DP
Sbjct: 105 TGPASLDP 112


>sp|HPS_METBF|3-HEXULOSE-6-PHOSPHATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 TGPGSGDPAG 10
T P +GDP G
Sbjct: 329 TVPNAGDPKG 338


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 GPGSGDPAG 10
GP GD AG
Sbjct: 896 GPAFGDDAG 904


>sp|GLNA3_HALMT|GLUTAMINE synthetase 3|Haloferax mediterranei (strain ATCC 33500

Query: 3 PGSGDPAG 10
P SGDP G
Sbjct: 115 PFSGDPRG 122


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 2 GPGSGDPAG 10
GPG+G+ G
Sbjct: 571 GPGAGEHGG 579


>sp|METXA_METAC|HOMOSERINE O-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TGPGSGDP 8
TGP S DP
Sbjct: 123 TGPSSIDP 130


>sp|MTSA_METBA|METHYLATED-THIOL--COENZYME M methyltransferase|Methanosarcina barkeri

Query: 1 TGPGSGDPA 9
TGP DPA
Sbjct: 98 TGPAYTDPA 106


>sp|GLNA_HALVD|GLUTAMINE synthetase|Haloferax volcanii (strain ATCC 29605

Query: 3 PGSGDPAG 10
P SGDP G
Sbjct: 115 PFSGDPRG 122


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GPGSGDPAG 10
GP GD AG
Sbjct: 905 GPAFGDDAG 913


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GPGSGDPAG 10
GP GD AG
Sbjct: 893 GPTFGDEAG 901




97|SequenceR|490|481|SGGGGTGPGS

>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 SGGGGTGP 8
SGGG GP
Sbjct: 184 SGGGNEGP 191


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SGGGGTGPG 9
+GGG GP
Sbjct: 193 AGGGNAGPA 201


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SGGGGTGPG 9
+GGG GP
Sbjct: 193 AGGGNAGPA 201


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SGGGGTGPG 9
+GGG GP
Sbjct: 193 AGGGNAGPA 201


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 SGGGGTGPG 9
+GGG GP
Sbjct: 193 AGGGNAGPA 201


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SGGGGTGP 8
+GGG GP
Sbjct: 190 AGGGNAGP 197


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SGGGGTGP 8
+GGG GP
Sbjct: 190 AGGGNAGP 197


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SGGGGTGP 8
+GGG GP
Sbjct: 192 AGGGNAGP 199


>sp|URE1_SULTO|UREASE subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GGGTGPG 9
GGGTGP
Sbjct: 157 GGGTGPA 163


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 SGGGGTGP 8
+GGG GP
Sbjct: 190 AGGGNAGP 197


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 GGGGTGPG 9
GGG GP
Sbjct: 193 GGGNAGPA 200


>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 196 GGGNAGP 202


>sp|SYA_SULAC|ALANINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 196 GGGNAGP 202


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 195 GGGNAGP 201


>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 195 GGGNAGP 201


>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 195 GGGNAGP 201


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 195 GGGNAGP 201


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 195 GGGNAGP 201


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 195 GGGNAGP 201


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 195 GGGNAGP 201


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 193 GGGNAGP 199


>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 195 GGGNAGP 201


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 193 GGGNAGP 199


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 193 GGGNAGP 199


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 193 GGGNAGP 199


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 193 GGGNAGP 199


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 191 GGGNAGP 197


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 193 GGGNAGP 199


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 190 GGGNAGP 196


>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 179 GGGNAGP 185


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 196 GGGNAGP 202


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 SGGGGTGP 8
+GGG GP
Sbjct: 190 AGGGNAGP 197


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 190 GGGNAGP 196


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 194 GGGNAGP 200


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GGGGTGPG 9
GGG GP
Sbjct: 203 GGGNAGPA 210


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 188 GGGNAGP 194


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 188 GGGNEGP 194


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 185 GGGNEGP 191


>sp|TRPF_HALLT|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 SGGGGTG 7
SG GGTG
Sbjct: 134 SGAGGTG 140


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 190 GGGNAGP 196


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 SGGGGTGP 8
+GGG GP
Sbjct: 207 AGGGNFGP 214


>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GGGGTGPG 9
GGG GP
Sbjct: 205 GGGNAGPA 212


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 GGGGTGPG 9
GGG GP
Sbjct: 204 GGGNAGPA 211


>sp|PYRH_SULAC|URIDYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SGGGGTG 7
+GGGGT
Sbjct: 41 TGGGGTA 47


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 SGGGGTGP 8
+GGG GP
Sbjct: 202 AGGGSFGP 209


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GGGGTGP 8
GGG GP
Sbjct: 190 GGGNAGP 196


>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 GGGGTGPG 9
GGG GP
Sbjct: 204 GGGNAGPA 211


>sp|RRP4_THEAM|EXOSOME complex component Rrp4|Thermosphaera aggregans (strain DSM 11486

Query: 2 GGGGTG 7
GGGG+G
Sbjct: 238 GGGGSG 243


>sp|AMPPA_THEON|AMP phosphorylase|Thermococcus onnurineus (strain NA1)

Query: 5 GTGPGS 10
GTGPGS
Sbjct: 344 GTGPGS 349


>sp|TRPF_HALVD|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Haloferax volcanii (strain ATCC 29605

Query: 1 SGGGGTG 7
SG GGTG
Sbjct: 133 SGAGGTG 139




98|SequenceR|495|486|GGGSGSGGGG

>sp|HTR1_HALMA|SENSORY rhodopsin I transducer|Haloarcula marismortui (strain ATCC 43049

Query: 1 GGGSGSGGGG 10
GG GSG G
Sbjct: 344 AGGQGSGADG 353


Query: 1 GGGSGSGGGG 10
G GSG+ G G
Sbjct: 346 GQGSGADGNG 355


>sp|MVK_METJA|MEVALONATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 SGSGGGG 10
+G+GGGG
Sbjct: 274 TGAGGGG 280


>sp|COXX_SULTO|PROTOHEME IX farnesyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GGGSGSGGG 9
GG SGGG
Sbjct: 65 GGSLASGGG 73


Query: 2 GGSGSGGGG 10
GGS + GGG
Sbjct: 65 GGSLASGGG 73


>sp|TOP6B_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 5 GSGGGG 10
G GGGG
Sbjct: 9 GDGGGG 14


>sp|SYFA_THEKO|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GGGSGSGGGG 10
GG +GS G G
Sbjct: 317 GGDTGSRGWG 326


>sp|SYFA_METKA|PHENYLALANINE--TRNA ligase alpha subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 GGGSGSGGGG 10
GG +GS G G
Sbjct: 335 GGDTGSRGWG 344




99|SequenceR|500|491|GSGGGGGGSG

>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 SGGGGG 7
SGGGGG
Sbjct: 887 SGGGGG 892


Query: 4 GGGGG 8
GGGGG
Sbjct: 888 GGGGG 892


>sp|MVK_METJA|MEVALONATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SGGGGGG 8
+G GGGG
Sbjct: 274 TGAGGGG 280


Query: 1 GSGGGG 6
G+GGGG
Sbjct: 275 GAGGGG 280


>sp|Y1038_PYRHO|PROBABLE ABC transporter permease protein|Pyrococcus horikoshii (strain ATCC

Query: 1 GSGGGGGGS 9
+GGG GG+
Sbjct: 239 ATGGGPGGA 247


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 3 GGGGGG 8
GG GGG
Sbjct: 173 GGAGGG 178


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 3 GGGGGG 8
GG GGG
Sbjct: 175 GGAGGG 180


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 3 GGGGGG 8
GG GGG
Sbjct: 173 GGAGGG 178


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 3 GGGGGG 8
GG GGG
Sbjct: 175 GGAGGG 180


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 3 GGGGGG 8
GG GGG
Sbjct: 175 GGAGGG 180


>sp|SPEE_THEON|POLYAMINE aminopropyltransferase|Thermococcus onnurineus (strain NA1)

Query: 3 GGGGGGS 9
GGG GG+
Sbjct: 88 GGGDGGT 94


>sp|SPEE_THEKO|POLYAMINE aminopropyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 3 GGGGGGS 9
GGG GG+
Sbjct: 88 GGGDGGT 94


>sp|SPEE_PYRFU|POLYAMINE aminopropyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GGGGGGS 9
GGG GG+
Sbjct: 83 GGGDGGT 89


>sp|SPEE_METJA|POLYAMINE aminopropyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 GGGGGGS 9
GGG GG+
Sbjct: 91 GGGDGGT 97


>sp|FPRA_METTM|COENZYME F420H(2) oxidase|Methanothermobacter marburgensis (strain ATCC

Query: 1 GSGGGGGGS 9
GS GG GG+
Sbjct: 350 GSMGGNGGA 358


Query: 3 GGGGGGSG 10
GG GG +G
Sbjct: 353 GGNGGATG 360


>sp|RRP4_THEAM|EXOSOME complex component Rrp4|Thermosphaera aggregans (strain DSM 11486

Query: 5 GGGGSG 10
GGGGSG
Sbjct: 238 GGGGSG 243


>sp|SPEE_KORCO|POLYAMINE aminopropyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 GGGGGGS 9
GGG GG+
Sbjct: 105 GGGDGGA 111


>sp|SPEE_ARCFU|POLYAMINE aminopropyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GGGGGGS 9
GGG GG+
Sbjct: 80 GGGDGGA 86


>sp|GLCU_SACS2|GLUCOSE import system permease protein|Saccharolobus solfataricus (strain

Query: 5 GGGGSG 10
GGGG G
Sbjct: 281 GGGGKG 286


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 3 GGGGGG 8
GG GGG
Sbjct: 175 GGSGGG 180


>sp|FTSZ_THEAC|CELL division protein FtsZ|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GSGGGGGGS 9
G GGGG +
Sbjct: 49 GCGGGGSNT 57


>sp|RECJ2_METJA|EXONUCLEASE RecJ2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GGGGGG 8
GG GGG
Sbjct: 396 GGNGGG 401


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 3 GGGGGG 8
GG GGG
Sbjct: 173 GGAGGG 178


>sp|TOP6B_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GSGGGG 6
G GGGG
Sbjct: 9 GDGGGG 14


>sp|HTR1_HALMA|SENSORY rhodopsin I transducer|Haloarcula marismortui (strain ATCC 43049

Query: 1 GSGGGGGGSG 10
G G G G+G
Sbjct: 346 GQGSGADGNG 355


>sp|Y1625_ARCFU|UNCHARACTERIZED protein AF_1625|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SGGGGGGSG 10
S GG GG G
Sbjct: 375 SSGGLGGQG 383


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 3 GGGGGG 8
GG GGG
Sbjct: 173 GGSGGG 178


>sp|TRPF_METTP|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 GGGGGSG 10
GG GGSG
Sbjct: 132 GGLGGSG 138




100|SequenceR|505|496|RASGGGSGGG

>sp|Y1038_PYRHO|PROBABLE ABC transporter permease protein|Pyrococcus horikoshii (strain ATCC

Query: 2 ASGGGSGGG 10
A+GGG GG
Sbjct: 239 ATGGGPGGA 247


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 5 GGSGGG 10
GGSGGG
Sbjct: 175 GGSGGG 180


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 5 GGSGGG 10
GGSGGG
Sbjct: 173 GGSGGG 178


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 5 GGSGGG 10
GGSGGG
Sbjct: 856 GGSGGG 861


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 RASGGGSG 8
RASGGG+G
Sbjct: 813 RASGGGAG 820


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 RASGGGSG 8
RASGGG+G
Sbjct: 813 RASGGGAG 820


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 5 GGSGGG 10
GG+GGG
Sbjct: 173 GGTGGG 178


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 5 GGSGGG 10
GG+GGG
Sbjct: 175 GGTGGG 180


>sp|CARB1_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 5 GGSGGG 10
GG+GGG
Sbjct: 172 GGTGGG 177


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 5 GGSGGG 10
GG+GGG
Sbjct: 175 GGAGGG 180


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 5 GGSGGG 10
GG+GGG
Sbjct: 173 GGAGGG 178


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 5 GGSGGG 10
GG+GGG
Sbjct: 175 GGAGGG 180


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 5 GGSGGG 10
GG+GGG
Sbjct: 175 GGAGGG 180


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 5 GGSGGG 10
GG+GGG
Sbjct: 173 GGAGGG 178


>sp|RECJ2_METJA|EXONUCLEASE RecJ2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 GGSGGG 10
GG+GGG
Sbjct: 396 GGNGGG 401


>sp|TRPF_METKA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanopyrus kandleri (strain AV19 /

Query: 2 ASGGGSG 8
A GGGSG
Sbjct: 140 AEGGGSG 146


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 5 GGSGGG 10
GG+GGG
Sbjct: 173 GGAGGG 178


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 5 GGSGGG 10
GG+GGG
Sbjct: 173 GGTGGG 178


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 RASGGG 6
RASGGG
Sbjct: 812 RASGGG 817


>sp|SPEE_KORCO|POLYAMINE aminopropyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 4 GGGSGGG 10
GGG GG
Sbjct: 105 GGGDGGA 111


>sp|SPEE_ARCFU|POLYAMINE aminopropyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GGGSGGG 10
GGG GG
Sbjct: 80 GGGDGGA 86


>sp|Y417_ARCFU|UNCHARACTERIZED protein AF_0417|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ASGGGSG 8
ASGGG+G
Sbjct: 184 ASGGGTG 190


>sp|ALAXL_PYRHO|ALANYL-TRNA editing protein AlaX-L|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 GGSGGG 10
GG GGG
Sbjct: 369 GGKGGG 374


>sp|SPEE_THEON|POLYAMINE aminopropyltransferase|Thermococcus onnurineus (strain NA1)

Query: 4 GGGSGG 9
GGG GG
Sbjct: 88 GGGDGG 93


>sp|SPEE_THEKO|POLYAMINE aminopropyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 4 GGGSGG 9
GGG GG
Sbjct: 88 GGGDGG 93


>sp|SPEE_PYRFU|POLYAMINE aminopropyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GGGSGG 9
GGG GG
Sbjct: 83 GGGDGG 88


>sp|SPEE_METJA|POLYAMINE aminopropyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 GGGSGG 9
GGG GG
Sbjct: 91 GGGDGG 96


>sp|ACDB2_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 3 SGGGSGG 9
SGG SGG
Sbjct: 440 SGGSSGG 446


>sp|ACDB1_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 3 SGGGSGG 9
SGG SGG
Sbjct: 439 SGGSSGG 445


>sp|CARB1_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 5 GGSGGG 10
GG+GGG
Sbjct: 173 GGTGGG 178


>sp|ACDB2_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 3 SGGGSGG 9
SGG SGG
Sbjct: 440 SGGSSGG 446


>sp|ACDB1_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 3 SGGGSGG 9
SGG SGG
Sbjct: 439 SGGSSGG 445


>sp|SPEE_PYRAB|POLYAMINE aminopropyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 4 GGGSGG 9
GGG GG
Sbjct: 81 GGGDGG 86




101|SequenceR|510|501|LASGDRASGG

>sp|HTPX_THEVO|PROTEASE HtpX homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LASGDRASGG 10
L +GDR +GG
Sbjct: 180 LFAGDRRNGG 189


>sp|AATA_HYPBU|A-TYPE ATP synthase subunit A|Hyperthermus butylicus (strain DSM 5456

Query: 1 LASGDRASGG 10
L GD+ SGG
Sbjct: 127 LKPGDKVSGG 136


>sp|AATA_THEGJ|A-TYPE ATP synthase subunit A|Thermococcus gammatolerans (strain DSM 15229

Query: 4 GDRASGG 10
GDR +GG
Sbjct: 124 GDRVTGG 130


>sp|HISX_ARCFU|HISTIDINOL dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LASGDRASG 9
+A+GD ASG
Sbjct: 330 VAAGDYASG 338




102|SequenceR|515|506|CEGCRLASGD

>sp|MTNA_PYRHO|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus horikoshii

Query: 1 CEGCRLA 7
C GCR+A
Sbjct: 307 CGGCRIA 313


>sp|MTNA_PYRFU|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus furiosus (strain

Query: 1 CEGCRLA 7
C GCR+A
Sbjct: 307 CGGCRIA 313


>sp|MTNA_PYRAB|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus abyssi (strain

Query: 1 CEGCRLA 7
C GCR+A
Sbjct: 307 CGGCRIA 313


>sp|PUR5_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EGCRLAS 8
EGCR+A+
Sbjct: 122 EGCRIAN 128


>sp|Y118_ARCFU|UNCHARACTERIZED protein AF_0118|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CEGCRLASGD 10
CEGC L + D
Sbjct: 59 CEGCPLTNFD 68


>sp|Y749_METJA|UNCHARACTERIZED protein MJ0749|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CEGCRL 6
C GCRL
Sbjct: 194 CVGCRL 199


>sp|Y620_METKA|UPF0425 pyridoxal phosphate-dependent protein MK0620|Methanopyrus kandleri

Query: 2 EGCRLA 7
EGCRLA
Sbjct: 120 EGCRLA 125


>sp|MVHG_METTM|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter marburgensis (strain

Query: 1 CEGCRLASGD 10
C GC L+ D
Sbjct: 15 CSGCHLSIAD 24


>sp|MVHG_METTH|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter thermautotrophicus

Query: 1 CEGCRLASGD 10
C GC L+ D
Sbjct: 15 CSGCHLSIAD 24


>sp|HUTI_HALSA|IMIDAZOLONEPROPIONASE salinarum (strain ATCC 700922

Query: 1 CEGCRLASGD 10
C G R+A D
Sbjct: 341 CNGMRMAPAD 350


>sp|HUTI_HALS3|IMIDAZOLONEPROPIONASE salinarum (strain ATCC 29341

Query: 1 CEGCRLASGD 10
C G R+A D
Sbjct: 341 CNGMRMAPAD 350


>sp|Y1272_IGNH4|UPF0179 protein Igni_1272|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 CEGCRL 6
CEGC L
Sbjct: 26 CEGCML 31




103|SequenceR|520|511|TFCRGCEGCR

>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain ATCC

Query: 1 TFCRGCEGC 9
T C GC GC
Sbjct: 623 TMCWGCGGC 631


>sp|Y1302_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ1302|Methanocaldococcus jannaschii

Query: 2 FCRGCEGC 9
C GCEGC
Sbjct: 57 LCIGCEGC 64


>sp|ISF3_ARCFU|IRON-SULFUR flavoprotein AF_1896|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CRGCEGC 9
C+GC+ C
Sbjct: 46 CKGCDAC 52


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 2 FCRGCEGC 9
+CRGC C
Sbjct: 596 YCRGCTIC 603


>sp|MOAA_PYRAE|PROBABLE GTP 3',8-cyclase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 TFCRGCEGCR 10
TFC GC R
Sbjct: 249 TFCSGCTTMR 258


>sp|QUEC_METAC|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TFCRGCEGC 9
T C GCE C
Sbjct: 201 TPCGGCESC 209


>sp|Y2336_PYRAR|UPF0179 protein Pars_2336|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 CRGCEGC 9
C GCEGC
Sbjct: 98 CAGCEGC 104


>sp|PORB_METJA|PYRUVATE synthase subunit PorB|Methanocaldococcus jannaschii (strain ATCC

Query: 4 RGCEGC 9
RGC GC
Sbjct: 17 RGCAGC 22


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter thermautotrophicus

Query: 3 CRGCEGC 9
CRGC C
Sbjct: 597 CRGCSVC 603


>sp|PORB_METTH|PYRUVATE synthase subunit PorB|Methanothermobacter thermautotrophicus

Query: 4 RGCEGC 9
RGC GC
Sbjct: 14 RGCAGC 19


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 3 CRGCEGC 9
C GC GC
Sbjct: 625 CWGCGGC 631


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 3 CRGCEGC 9
C GC GC
Sbjct: 625 CWGCGGC 631


>sp|PORB_METTM|PYRUVATE synthase subunit PorB|Methanothermobacter marburgensis (strain

Query: 4 RGCEGC 9
RGC GC
Sbjct: 14 RGCAGC 19


>sp|PUS10_KORCO|TRNA pseudouridine synthase Pus10|Korarchaeum cryptofilum (strain OPF8)

Query: 4 RGCEGC 9
RGCE C
Sbjct: 155 RGCEAC 160


>sp|QUEC_METST|7-CYANO-7-DEAZAGUANINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 TFCRGCEGCR 10
T C CE C+
Sbjct: 198 THCGVCESCK 207


>sp|Y804_METJA|UNCHARACTERIZED protein MJ0804|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CRGCEG 8
C GCEG
Sbjct: 25 CIGCEG 30


>sp|ARLY_HALSA|ARGININOSUCCINATE lyase|Halobacterium salinarum (strain ATCC 700922

Query: 4 RGCEG 8
RGCEG
Sbjct: 390 RGCEG 394


>sp|ARLY_HALS3|ARGININOSUCCINATE lyase|Halobacterium salinarum (strain ATCC 29341

Query: 4 RGCEG 8
RGCEG
Sbjct: 390 RGCEG 394


>sp|PUS10_METST|TRNA pseudouridine synthase Pus10|Methanosphaera stadtmanae (strain ATCC

Query: 4 RGCEGC 9
+GCE C
Sbjct: 190 KGCEAC 195


>sp|BAT_HALSA|BACTERIOOPSIN transcriptional activator|Halobacterium salinarum (strain ATCC

Query: 3 CRGCEG 8
C GC+G
Sbjct: 354 CEGCDG 359


>sp|Y1978_PYRNV|UPF0179 protein Tneu_1978|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 CRGCEGC 9
C GCEGC
Sbjct: 98 CAGCEGC 104


>sp|ISF1_ARCFU|IRON-SULFUR flavoprotein AF_1436|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FCRGCEGC 9
+C GC C
Sbjct: 46 YCTGCGTC 53


>sp|MVHG_METTM|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter marburgensis (strain ATCC

Query: 3 CRGCEG 8
CRGC G
Sbjct: 240 CRGCYG 245


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 RGCEGCR 10
RGC G R
Sbjct: 485 RGCAGAR 491


>sp|MVHG_METTH|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter thermautotrophicus

Query: 3 CRGCEG 8
CRGC G
Sbjct: 240 CRGCYG 245


>sp|Y681_PYRAE|UPF0179 protein PAE0681|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 CRGCEGC 9
C GCEGC
Sbjct: 98 CAGCEGC 104


>sp|ISF_METTE|IRON-SULFUR flavoprotein|Methanosarcina thermophila

Query: 3 CRGCEGCR 10
C+ C CR
Sbjct: 47 CKACGACR 54


>sp|TFE_METVS|TRANSCRIPTION factor E|Methanococcus vannielii (strain ATCC 35089

Query: 2 FCRGCE 7
+C GCE
Sbjct: 116 YCMGCE 121


>sp|RPO3_METKA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanopyrus kandleri (strain AV19 /

Query: 4 RGCEGCR 10
+GCE C+
Sbjct: 92 KGCEKCQ 98


>sp|MOAA_METS5|PROBABLE GTP 3',8-cyclase|Metallosphaera sedula (strain ATCC 51363

Query: 2 FCRGCEGCR 10
FC GC R
Sbjct: 245 FCAGCNRVR 253


>sp|MOAA_SULTO|PROBABLE GTP 3',8-cyclase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FCRGCEGCR 10
FC GC R
Sbjct: 243 FCAGCNRIR 251


>sp|MOAA_SACS2|PROBABLE GTP 3',8-cyclase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 FCRGCEGCR 10
FC GC R
Sbjct: 244 FCAGCNRIR 252


>sp|MOAA_SACI7|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 FCRGCEGCR 10
FC GC R
Sbjct: 244 FCAGCNRIR 252


>sp|MOAA_SACI6|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 FCRGCEGCR 10
FC GC R
Sbjct: 244 FCAGCNRIR 252


>sp|MOAA_SACI4|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 FCRGCEGCR 10
FC GC R
Sbjct: 244 FCAGCNRIR 252


>sp|MOAA_SACI3|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.16.27)

Query: 2 FCRGCEGCR 10
FC GC R
Sbjct: 244 FCAGCNRIR 252


>sp|MOAA_SACI2|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 FCRGCEGCR 10
FC GC R
Sbjct: 244 FCAGCNRIR 252


>sp|MOAA_SACI1|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 FCRGCEGCR 10
FC GC R
Sbjct: 244 FCAGCNRIR 252


>sp|VHCG_METVO|F420-NON-REDUCING hydrogenase vhc subunit G|Methanococcus voltae

Query: 1 TFCRG-CEGC 9
T CRG C GC
Sbjct: 6 TTCRGCCSGC 15


>sp|FSR_METJA|COENZYME F420-dependent sulfite reductase|Methanocaldococcus jannaschii

Query: 3 CRGCEGCR 10
C GC+ CR
Sbjct: 253 CSGCKMCR 260


>sp|NOB1_METTH|ENDORIBONUCLEASE Nob1|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 RGCEGCR 10
R C GCR
Sbjct: 139 RVCTGCR 145


>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 5 GCEGC 9
GC GC
Sbjct: 115 GCSGC 119


>sp|SYFB_METHJ|PHENYLALANINE--TRNA ligase beta subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 TFCRGCE 7
TF GCE
Sbjct: 347 TFATGCE 353


>sp|MOAA_SULAC|PROBABLE GTP 3',8-cyclase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 FCRGCEGCR 10
FC GC R
Sbjct: 243 FCSGCNRIR 251


>sp|HDRB1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit B1|Methanococcus

Query: 1 TFCRGCEG 8
T C GC G
Sbjct: 81 TICNGCYG 88


>sp|DMRX_METJA|DIHYDROMETHANOPTERIN reductase (acceptor)|Methanocaldococcus jannaschii (strain ATCC

Query: 3 CRGCEGCR 10
C GC C+
Sbjct: 188 CLGCGNCK 195


>sp|PRIL_ARCFU|DNA primase large subunit PriL|Archaeoglobus fulgidus (strain ATCC

Query: 2 FCRGCE 7
FC GCE
Sbjct: 65 FCLGCE 70


>sp|HDRB2_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit B2|Methanococcus

Query: 1 TFCRGCEG 8
T C GC G
Sbjct: 76 TVCNGCYG 83


>sp|DNAJ_HALMA|CHAPERONE protein DnaJ|Haloarcula marismortui (strain ATCC 43049

Query: 1 TFCRGCEG 8
T CR C+G
Sbjct: 199 TTCRRCDG 206


>sp|HDRB1_METJA|COB--COM heterodisulfide reductase subunit B|Methanocaldococcus jannaschii

Query: 1 TFCRGCEG 8
T C GC G
Sbjct: 76 TICNGCYG 83


>sp|VHUG_METVO|F420-NON-REDUCING hydrogenase vhu subunit G|Methanococcus voltae

Query: 3 CRGCEG 8
CRGC G
Sbjct: 234 CRGCYG 239


>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 3 CRGCEGC 9
C GCE C
Sbjct: 591 CGGCEVC 597


Query: 2 FCRGCEGC 9
C+GC C
Sbjct: 619 LCKGCGTC 626


>sp|HDRB2_METJA|COB--COM heterodisulfide reductase subunit B|Methanocaldococcus jannaschii

Query: 1 TFCRGCEG 8
T C GC G
Sbjct: 76 TVCNGCYG 83


>sp|HDRA_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 3 CRGCEGC 9
C GCE C
Sbjct: 592 CGGCEVC 598


>sp|AROD_AERPE|3-DEHYDROQUINATE dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 5 GCEGC 9
GC GC
Sbjct: 108 GCSGC 112


>sp|VHUG_METJA|F420-NON-REDUCING hydrogenase vhu subunit G|Methanocaldococcus jannaschii (strain

Query: 3 CRGCEG 8
CRGC G
Sbjct: 235 CRGCFG 240




104|SequenceR|525|516|LHAPRTFCRG

>sp|RFCL_PYRIL|REPLICATION factor C large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 3 APRTFC 8
APR FC
Sbjct: 37 APREFC 42


>sp|GATD_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain DSM

Query: 2 HAPRTFCRG 10
H P TF G
Sbjct: 325 HTPETFFEG 333


>sp|GATD_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain C7 /

Query: 2 HAPRTFCRG 10
H P TF G
Sbjct: 325 HTPETFFEG 333


>sp|GATD_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain C6 /

Query: 2 HAPRTFCRG 10
H P TF G
Sbjct: 325 HTPETFFEG 333


>sp|GATD_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain C5 /

Query: 2 HAPRTFCRG 10
H P TF G
Sbjct: 325 HTPETFFEG 333




105|SequenceR|530|521|MRHRILHAPR

>sp|RL24_ARCFU|LARGE ribosomal subunit protein uL24|Archaeoglobus fulgidus (strain

Query: 2 RHRILHA 8
RH++LHA
Sbjct: 25 RHKLLHA 31




106|SequenceR|535|526|EGTHLMRHRI

>sp|Y237_THEAC|MEMO1 family protein Ta0237|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EGTHLMRHRI 10
E +HLM H +
Sbjct: 119 EESHLMEHSV 128


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 THLMRHR 9
TH +RHR
Sbjct: 1128 THAIRHR 1134




107|SequenceR|540|531|CPFPREGTHL

>sp|HEM3_METBF|PROBABLE porphobilinogen deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 1 CPFPREGT 8
CP P +GT
Sbjct: 186 CPSPNQGT 193


>sp|HEM3_METAC|PROBABLE porphobilinogen deaminase|Methanosarcina acetivorans (strain ATCC

Query: 1 CPFPREGT 8
CP P +GT
Sbjct: 186 CPSPNQGT 193


>sp|HEM3_METMA|PROBABLE porphobilinogen deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CPFPREGT 8
CP P +GT
Sbjct: 186 CPSPNQGT 193


>sp|RS24_METST|SMALL ribosomal subunit protein eS24|Methanosphaera stadtmanae (strain

Query: 1 CPFPREGT 8
C +P EGT
Sbjct: 23 CEYPTEGT 30


>sp|UPPP_SACS2|UNDECAPRENYL-DIPHOSPHATASE solfataricus (strain ATCC 35092

Query: 3 FPREGTH 9
FPR+G H
Sbjct: 139 FPRKGLH 145


>sp|FLPA_PYRAR|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum arsenaticum (strain

Query: 5 REGTHL 10
REGTH+
Sbjct: 77 REGTHM 82


>sp|FLPA_PYRCJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum calidifontis (strain

Query: 5 REGTHL 10
REGTH+
Sbjct: 77 REGTHM 82


>sp|TFE_METB6|TRANSCRIPTION factor E|Methanoregula boonei (strain DSM 21154

Query: 3 FPREGTH 9
FP++G H
Sbjct: 32 FPKDGEH 38


>sp|HIS8_METKA|HISTIDINOL-PHOSPHATE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 PFPREGTHL 10
PFP E +L
Sbjct: 321 PFPSEANYL 329


>sp|ARGC_METAR|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 4 PREGTH 9
P EGTH
Sbjct: 181 PTEGTH 186




108|SequenceR|545|536|KECETCPFPR

>sp|IF2G_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 ECETCPFP 9
ECE C FP
Sbjct: 59 ECEGCGFP 66


>sp|IF2G_METM7|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C7

Query: 1 KECETCPFP 9
K+CETC P
Sbjct: 56 KKCETCDEP 64


>sp|IF2G_METM6|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C6

Query: 1 KECETCPFP 9
K+CETC P
Sbjct: 56 KKCETCDEP 64


>sp|IF2G_METM5|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C5

Query: 1 KECETCPFP 9
K+CETC P
Sbjct: 56 KKCETCDEP 64


>sp|DMRX_METMA|DIHYDROMETHANOPTERIN reductase (acceptor)|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KECETCPFPR 10
K CETCP PR
Sbjct: 154 KHCETCP-PR 162


>sp|IF2G_METMP|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain DSM

Query: 1 KECETCPFP 9
K+CETC P
Sbjct: 56 KKCETCDEP 64


>sp|Y1292_METJA|UNCHARACTERIZED protein MJ1292|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ECETCPFP 9
E E CP+P
Sbjct: 138 EFEICPYP 145


>sp|ASPG_PYRFU|L-ASPARAGINASE furiosus (strain ATCC 43587

Query: 1 KECETCPF 8
K+CE C F
Sbjct: 37 KDCEDCDF 44


>sp|Y979_METVS|UPF0179 protein Mevan_0979|Methanococcus vannielii (strain ATCC 35089

Query: 2 ECETCPFPR 10
ECE+C F R
Sbjct: 26 ECESCRFKR 34


>sp|GUAAB_METBU|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcoides

Query: 3 CETCPFP 9
CE PFP
Sbjct: 181 CERMPFP 187


>sp|Y890_METTH|UPF0292 protein MTH_890|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 ETCPFP 9
E CP+P
Sbjct: 129 EVCPYP 134


>sp|Y1157_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KECETCPFP 9
+ CE C FP
Sbjct: 314 RRCEICGFP 322


>sp|IF2G_METVS|TRANSLATION initiation factor 2 subunit|Methanococcus vannielii (strain ATCC

Query: 1 KECETCPFP 9
K+CE+C P
Sbjct: 56 KKCESCNEP 64


>sp|GUAAB_METBF|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina barkeri

Query: 3 CETCPFP 9
CE PFP
Sbjct: 182 CERMPFP 188


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain

Query: 2 ECETCP 7
+C+TCP
Sbjct: 7 KCDTCP 12


>sp|GUAAB_METMA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina mazei

Query: 3 CETCPFP 9
CE PFP
Sbjct: 182 CERMPFP 188


>sp|GUAAB_METAC|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina

Query: 3 CETCPFP 9
CE PFP
Sbjct: 182 CERMPFP 188


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 1 KECETCPFP 9
+ECE C P
Sbjct: 659 EECERCGRP 667


>sp|RL37_METBU|LARGE ribosomal subunit protein eL37|Methanococcoides burtonii (strain

Query: 1 KECETCPFPR 10
K+C +C F R
Sbjct: 32 KQCTSCGFGR 41


>sp|CCA_METMP|CCA-ADDING enzyme|Methanococcus maripaludis (strain DSM 14266

Query: 1 KECETCPF 8
KEC C +
Sbjct: 391 KECNVCAY 398


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 2 ECETCPF 8
EC CPF
Sbjct: 620 ECLKCPF 626


>sp|Y1627_METJA|UPF0179 protein MJ1627|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KECETCPFPR 10
+EC+ C F R
Sbjct: 28 EECKNCKFKR 37


>sp|RL37_THEAC|LARGE ribosomal subunit protein eL37|Thermoplasma acidophilum (strain

Query: 1 KECETCPFP 9
K C C FP
Sbjct: 33 KRCSHCGFP 41


>sp|Y1303_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ1303|Methanocaldococcus jannaschii

Query: 1 KECETCPFPR 10
++C++CPF +
Sbjct: 18 EKCQSCPFSQ 27


>sp|NRDR_NATPD|TRANSCRIPTIONAL repressor NrdR|Natronomonas pharaonis (strain ATCC 35678

Query: 1 KECETCPF 8
+EC+ C F
Sbjct: 29 RECQRCSF 36


>sp|RL37_THEVO|LARGE ribosomal subunit protein eL37|Thermoplasma volcanium (strain

Query: 1 KECETCPFP 9
K C C FP
Sbjct: 33 KRCSHCGFP 41


>sp|HYPA_METST|HYDROGENASE maturation factor HypA|Methanosphaera stadtmanae (strain ATCC

Query: 2 ECETCPF 8
ECE C F
Sbjct: 72 ECEDCGF 78


>sp|Y996_METST|UPF0179 protein Msp_0996|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 ECETCPFPR 10
+CE+C F R
Sbjct: 24 KCESCRFNR 32


>sp|Y993_METM6|UPF0179 protein MmarC6_0993|Methanococcus maripaludis (strain C6 /

Query: 1 KECETCPFPR 10
+ECE C F R
Sbjct: 25 EECEPCRFKR 34


>sp|Y952_METM7|UPF0179 protein MmarC7_0952|Methanococcus maripaludis (strain C7 /

Query: 1 KECETCPFPR 10
+ECE C F R
Sbjct: 25 EECEPCRFKR 34


>sp|Y1679_METMP|UPF0179 protein MMP1679|Methanococcus maripaludis (strain DSM 14266

Query: 1 KECETCPFPR 10
+ECE C F R
Sbjct: 25 EECEPCRFKR 34


>sp|Y1959_METB6|UPF0179 protein Mboo_1959|Methanoregula boonei (strain DSM 21154

Query: 2 ECETCPFPR 10
ECETC +
Sbjct: 30 ECETCKVKK 38


>sp|Y1728_METM5|UPF0179 protein MmarC5_1728|Methanococcus maripaludis (strain C5 /

Query: 1 KECETCPFPR 10
+ECE C F R
Sbjct: 25 EECEPCRFKR 34


>sp|SUI1_METST|PROTEIN translation factor SUI1 homolog|Methanosphaera stadtmanae (strain

Query: 1 KECETCPFPR 10
K CE C P+
Sbjct: 2 KICEICGLPK 11




109|SequenceR|550|541|RETFRKECET

>sp|EF1A_METMJ|ELONGATION factor 1-alpha|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 ETFRKECET 10
E+FRKE E+
Sbjct: 40 ESFRKEAES 48


>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 ETFRKECET 10
E FRKE E+
Sbjct: 40 ENFRKEAES 48


>sp|PPSA_ARCFU|PROBABLE phosphoenolpyruvate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 1 RETFRKECE 9
RE +RK CE
Sbjct: 98 REAYRKLCE 106


>sp|ILVD_METJA|DIHYDROXY-ACID dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ETFRKECET 10
E RKEC T
Sbjct: 330 EKIRKECLT 338


>sp|TRUB_METTH|PROBABLE tRNA pseudouridine synthase B|Methanothermobacter

Query: 2 ETFRKEC 8
ETF +EC
Sbjct: 222 ETFLREC 228


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 RETFRKECE 9
RE FR+ CE
Sbjct: 105 REEFRRLCE 113


>sp|SYS_THEVO|SERINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RETFRKECE 9
RE F K CE
Sbjct: 11 RELFEKNCE 19


>sp|SYS_THEAC|SERINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RETFRKECE 9
RE F K CE
Sbjct: 11 RELFEKNCE 19




110|SequenceR|555|546|DILKSRETFR

>sp|NADK_THEGJ|NAD kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 DILKSRETF 9
D+L RETF
Sbjct: 31 DVLVDRETF 39


>sp|DP2S_PYRHO|DNA polymerase II small subunit|Pyrococcus horikoshii (strain ATCC

Query: 4 KSRETF 9
KSRETF
Sbjct: 42 KSRETF 47


>sp|RS12_PICTO|SMALL ribosomal subunit protein uS12|Picrophilus torridus (strain ATCC

Query: 2 ILKSRETFR 10
++KSR+T+R
Sbjct: 11 LMKSRKTYR 19


>sp|SYK_METHJ|LYSINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 KSRETFR 10
+SRETFR
Sbjct: 168 ESRETFR 174


>sp|SYK_METMJ|LYSINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 KSRETFR 10
+SRETFR
Sbjct: 168 ESRETFR 174


>sp|Y1635_METJA|TNPB-LIKE protein MJ1635|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ILKSRETF 9
ILK +ETF
Sbjct: 170 ILKEKETF 177


>sp|Y995_META3|UPF0288 protein Maeo_0995|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DILKSRE 7
DILKS+E
Sbjct: 352 DILKSKE 358




111|SequenceR|560|551|HTRYHDILKS

>sp|CUTB_SULAC|GLYCERALDEHYDE dehydrogenase medium chain|Sulfolobus acidocaldarius (strain ATCC

Query: 2 TRYHDILKS 10
TRYHDIL +
Sbjct: 75 TRYHDILSN 83


>sp|GLNA_ARCFU|GLUTAMINE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RYHDILKS 10
RY D+LKS
Sbjct: 126 RYEDMLKS 133


>sp|TMBL1_PYRFU|HTH-TYPE sugar sensing transcriptional regulator|Pyrococcus furiosus

Query: 1 HTRYHDILKS 10
HTR +D+L S
Sbjct: 45 HTRIYDVLSS 54


>sp|SYM_METTH|METHIONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 TRYHDILK 9
TRYH++++
Sbjct: 72 TRYHEMIR 79


>sp|TF2B4_HALSA|TRANSCRIPTION initiation factor IIB 4|Halobacterium salinarum (strain ATCC 700922

Query: 3 RYHDILKS 10
RYH+IL +
Sbjct: 313 RYHEILDA 320


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HTRYHDI 7
+T+YHD+
Sbjct: 100 YTKYHDV 106


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HTRYHDIL 8
H R HDI+
Sbjct: 109 HNRTHDIV 116


>sp|TRPE_THEKO|ANTHRANILATE synthase component 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 TRYHDILK 9
TR+ D+LK
Sbjct: 304 TRFFDVLK 311


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 RYHDILKS 10
RY ++LKS
Sbjct: 403 RYREVLKS 410


>sp|GUAAA_METM7|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus

Query: 1 HTRYHDIL 8
HT Y D+L
Sbjct: 168 HTEYGDVL 175


>sp|K6PF_METJA|BIFUNCTIONAL ADP-specific glucokinase/phosphofructokinase|Methanocaldococcus

Query: 1 HTRYHDILK 9
H +Y D+LK
Sbjct: 402 HNKYGDLLK 410


>sp|GUAAA_METMP|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus

Query: 1 HTRYHDIL 8
HT Y DI+
Sbjct: 168 HTEYGDII 175


>sp|TF2B6_HALSA|TRANSCRIPTION initiation factor IIB 6|Halobacterium salinarum (strain ATCC 700922

Query: 3 RYHDILKS 10
RYH++L++
Sbjct: 306 RYHELLEA 313


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 HTRYHDILK 9
HT HD+L+
Sbjct: 1102 HTPQHDLLR 1110


>sp|PYRG_METMP|CTP synthase|Methanococcus maripaludis (strain DSM 14266

Query: 4 YHDILK 9
YH+ILK
Sbjct: 471 YHEILK 476




112|SequenceR|565|556|PRVGTHTRYH

>sp|RADA_SULTO|DNA repair and recombination protein|Sulfurisphaera tokodaii (strain

Query: 3 VGTHTRYH 10
VG HT YH
Sbjct: 272 VGGHTLYH 279


>sp|RADA_SACS2|DNA repair and recombination protein|Saccharolobus solfataricus (strain

Query: 3 VGTHTRYH 10
VG HT YH
Sbjct: 272 VGGHTLYH 279


>sp|RADA_SACI7|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 3 VGTHTRYH 10
VG HT YH
Sbjct: 272 VGGHTLYH 279


>sp|RADA_SACI6|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 3 VGTHTRYH 10
VG HT YH
Sbjct: 272 VGGHTLYH 279


>sp|RADA_SACI4|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 3 VGTHTRYH 10
VG HT YH
Sbjct: 272 VGGHTLYH 279


>sp|RADA_SACI3|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 3 VGTHTRYH 10
VG HT YH
Sbjct: 272 VGGHTLYH 279


>sp|RADA_SACI2|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 3 VGTHTRYH 10
VG HT YH
Sbjct: 272 VGGHTLYH 279


>sp|RADA_SACI1|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 3 VGTHTRYH 10
VG HT YH
Sbjct: 272 VGGHTLYH 279


>sp|RADA_SULAC|DNA repair and recombination protein|Sulfolobus acidocaldarius (strain

Query: 3 VGTHTRYH 10
VG HT YH
Sbjct: 269 VGGHTLYH 276


>sp|Y421_METJA|UNCHARACTERIZED protein MJ0421|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RVGTHTRY 9
++G H+RY
Sbjct: 223 KIGQHSRY 230


>sp|RADA_METS5|DNA repair and recombination protein|Metallosphaera sedula (strain ATCC

Query: 3 VGTHTRYH 10
VG HT YH
Sbjct: 272 VGGHTLYH 279


>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 2 RVGTHTRY 9
RV TH RY
Sbjct: 369 RVTTHDRY 376


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 2 RVGTHTRYH 10
R+GT +YH
Sbjct: 954 RLGTDNQYH 962


>sp|DHQS_METTP|3-DEHYDROQUINATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 RVGTHTRY 9
RVG TRY
Sbjct: 256 RVGDKTRY 263


>sp|ATRMA_PYRHO|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 1 PRVGTHTR 8
PRVG H +
Sbjct: 343 PRVGLHPK 350


>sp|FRHA_METJA|COENZYME F420 hydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 1 PRVGTHTRY 9
P + THT Y
Sbjct: 219 PYIATHTTY 227


>sp|PURP_METVS|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus vannielii (strain ATCC

Query: 3 VGTHTRYH 10
VG+HT H
Sbjct: 24 VGSHTSLH 31


>sp|PURP_METMP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain DSM

Query: 3 VGTHTRYH 10
VG+HT H
Sbjct: 24 VGSHTSLH 31


>sp|PURP_METM7|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C7

Query: 3 VGTHTRYH 10
VG+HT H
Sbjct: 24 VGSHTSLH 31


>sp|PURP_METM6|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C6

Query: 3 VGTHTRYH 10
VG+HT H
Sbjct: 24 VGSHTSLH 31


>sp|PURP_METM5|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C5

Query: 3 VGTHTRYH 10
VG+HT H
Sbjct: 24 VGSHTSLH 31


>sp|PURP_META3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus aeolicus (strain ATCC

Query: 3 VGTHTRYH 10
VG+HT H
Sbjct: 24 VGSHTSLH 31


>sp|HELS_ARCFU|ATP-DEPENDENT DNA helicase Hel308|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VGTHTRYH 10
V TH R+H
Sbjct: 411 VETHLRFH 418


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 GTHTRYH 10
GTH YH
Sbjct: 310 GTHEVYH 316




113|SequenceR|570|561|VTCTFPRVGT

>sp|RL6_METM6|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 1 VTCTFPR 7
+ CTFPR
Sbjct: 55 IECTFPR 61


>sp|RL6_METM7|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 1 VTCTFPR 7
+ CTFPR
Sbjct: 55 IECTFPR 61


>sp|RL6_METM5|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 1 VTCTFPR 7
+ CTFPR
Sbjct: 55 IECTFPR 61


>sp|FTTA_METMP|TRANSCRIPTION termination factor FttA|Methanococcus maripaludis (strain DSM 14266

Query: 3 CTFPRVGT 10
C FPR+ T
Sbjct: 365 CQFPRLET 372


>sp|KPRS1_ARCFU|RIBOSE-PHOSPHATE pyrophosphokinase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VTCTFP 6
VTC FP
Sbjct: 82 VTCVFP 87


>sp|FTTA_METJA|TRANSCRIPTION termination factor FttA|Methanocaldococcus jannaschii (strain ATCC

Query: 3 CTFPRVGT 10
C FPR+ T
Sbjct: 364 CQFPRLET 371


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 2 TCTFPRVG 9
+CTFP G
Sbjct: 459 SCTFPLPG 466


>sp|RRP42_METTH|EXOSOME complex component Rrp42|Methanothermobacter thermautotrophicus

Query: 1 VTCTFPRVG 9
+ CTF ++G
Sbjct: 194 LMCTFAKIG 202


>sp|NTPTH_IGNH4|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VTCTFPRVG 9
V C PRVG
Sbjct: 65 VDCEGPRVG 73




114|SequenceR|575|566|FSKGCVTCTF

>sp|GLPK1_SULAC|GLYCEROL kinase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FSKGCVTCTF 10
FSKG V CT+
Sbjct: 250 FSKGDVKCTY 259


>sp|CCA_METM7|CCA-ADDING enzyme|Methanococcus maripaludis (strain C7 /

Query: 1 FSKGCVTCTF 10
F KGC C +
Sbjct: 389 FVKGCNVCAY 398


>sp|CCA_METM5|CCA-ADDING enzyme|Methanococcus maripaludis (strain C5 /

Query: 1 FSKGCVTCTF 10
F KGC C +
Sbjct: 389 FVKGCNVCAY 398


>sp|Y1433_ARCFU|UPF0215 protein AF_1433|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GCVTC 8
GCVTC
Sbjct: 22 GCVTC 26


>sp|ILVD_METTH|DIHYDROXY-ACID dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 SKGCVTCT 9
++ CVTCT
Sbjct: 333 NRECVTCT 340


>sp|PUS10_METV3|TRNA pseudouridine synthase Pus10|Methanococcus voltae (strain ATCC

Query: 3 KGCVTCTF 10
KGC C F
Sbjct: 292 KGCEKCNF 299


>sp|NARH_HALMT|RESPIRATORY nitrate reductase subunit beta|Haloferax mediterranei (strain

Query: 4 GCVTCT 9
GC TCT
Sbjct: 31 GCQTCT 36


>sp|RPO3_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermoplasma volcanium (strain ATCC

Query: 3 KGCVTCT 9
KGC CT
Sbjct: 96 KGCSLCT 102


>sp|RPO3_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermoplasma acidophilum (strain ATCC

Query: 3 KGCVTCT 9
KGC CT
Sbjct: 96 KGCSLCT 102


>sp|ILVD_METST|DIHYDROXY-ACID dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 CVTCT 9
C+TCT
Sbjct: 336 CITCT 340


>sp|NIFE_METMP|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 4 GCVTCTF 10
GC CT+
Sbjct: 98 GCAACTW 104


>sp|NIFE_METMI|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 4 GCVTCTF 10
GC CT+
Sbjct: 98 GCAACTW 104


>sp|FPOF_METMA|F(420)H(2) dehydrogenase subunit F|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 KGCVTCT 9
+GC+TC+
Sbjct: 56 EGCLTCS 62


>sp|NIFE_METTM|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 4 GCVTCTF 10
GC CT+
Sbjct: 91 GCAACTW 97


>sp|MCRAM_METAC|[METHYL coenzyme M reductase]-L-arginine

Query: 1 FSKGCVTCT 9
F KGC CT
Sbjct: 41 FKKGCDYCT 49


>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 3 KGCVTC 8
KGC TC
Sbjct: 621 KGCGTC 626


>sp|HDRA_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 3 KGCVTC 8
KGC TC
Sbjct: 622 KGCGTC 627


>sp|NIFE_METTH|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 4 GCVTCTF 10
GC CT+
Sbjct: 88 GCAACTW 94


>sp|Y347_METJA|UNCHARACTERIZED protein MJ0347|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SKGCVTC 8
+KGCV C
Sbjct: 125 TKGCVVC 131




115|SequenceR|580|571|HDKRIFSKGC

>sp|NIFH_METMP|NITROGENASE iron protein|Methanococcus maripaludis (strain DSM 14266

Query: 1 HDKRIFSKGC 10
HDK++F GC
Sbjct: 30 HDKKVFIHGC 39


>sp|NIFH_METMI|NITROGENASE iron protein|Methanococcus maripaludis (Methanococcus deltae)

Query: 1 HDKRIFSKGC 10
HDK++F GC
Sbjct: 30 HDKKVFIHGC 39


>sp|NIFH1_METBA|NITROGENASE iron protein 1|Methanosarcina barkeri

Query: 1 HDKRIFSKGC 10
H K+IF GC
Sbjct: 30 HGKKIFIHGC 39


>sp|RL6_SULAC|LARGE ribosomal subunit protein uL6|Sulfolobus acidocaldarius (strain

Query: 1 HDKRIFSKG 9
+D+RIFS G
Sbjct: 166 YDRRIFSDG 174


>sp|RL6_SACS2|LARGE ribosomal subunit protein uL6|Saccharolobus solfataricus (strain

Query: 2 DKRIFSKG 9
D+RIFS G
Sbjct: 164 DRRIFSDG 171


>sp|DAPB_METMA|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HDKRIFSKG 9
H ++IF+KG
Sbjct: 231 HSRQIFAKG 239


>sp|DAPB_METBF|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 HDKRIFSKG 9
H ++IF+KG
Sbjct: 231 HSRQIFAKG 239


>sp|DAPB_METAC|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HDKRIFSKG 9
H ++IF+KG
Sbjct: 231 HSRQIFAKG 239


>sp|RISC_AERPE|RIBOFLAVIN synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 KRIFSKGC 10
KRI S GC
Sbjct: 50 KRILSMGC 57


>sp|THSB_DESM0|CHAPERONIN subunit beta|Desulfurococcus mucosus (strain ATCC 35584

Query: 2 DKRIFSKGC 10
DK +F +GC
Sbjct: 359 DKMVFIEGC 367




116|SequenceR|585|576|QHKRLHDKRI

>sp|RS15_METAR|SMALL ribosomal subunit protein uS15|Methanocella arvoryzae (strain DSM

Query: 1 QHKRLHDKR 9
HK LH+KR
Sbjct: 105 NHKDLHNKR 113




117|SequenceR|590|581|AAHNRQHKRL

>sp|XACJ_HALVD|XYLOSE/ARABINOSE import ATP-binding protein XacJ|Haloferax volcanii (strain ATCC

Query: 1 AAHNRQHKR 9
A HNR+H +
Sbjct: 366 AVHNRRHDQ 374


>sp|Y787_METJA|UNCHARACTERIZED protein MJ0787|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NRQHKRL 10
NR HKRL
Sbjct: 168 NRIHKRL 174


>sp|RL3_NANEQ|LARGE ribosomal subunit protein uL3|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 HNRQHK 8
H RQHK
Sbjct: 210 HRRQHK 215




118|SequenceR|595|586|PTKAGAAHNR

>sp|Y1613_METJA|UNCHARACTERIZED protein MJ1613|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TKAGAAHN 9
T AGA HN
Sbjct: 117 TTAGAKHN 124


>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 1 PTKAGAAHNR 10
PT G +H R
Sbjct: 128 PTPPGVSHRR 137


>sp|MTRA2_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 2|Methanothermobacter

Query: 1 PTKAGAA 7
P KAGAA
Sbjct: 43 PVKAGAA 49


>sp|GLNA_METMP|GLUTAMINE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PTKAGAA 7
P KAGAA
Sbjct: 36 PVKAGAA 42




119|SequenceR|600|591|PQGRAPTKAG

>sp|HMGCS_METBF|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PQGRAPTKA 9
P G+ PTKA
Sbjct: 239 PNGKFPTKA 247


>sp|RL22_METST|LARGE ribosomal subunit protein uL22|Methanosphaera stadtmanae (strain

Query: 1 PQGRAPTKAG 10
P GR P KA
Sbjct: 80 PSGRYPVKAA 89


>sp|RL22_METAR|LARGE ribosomal subunit protein uL22|Methanocella arvoryzae (strain DSM

Query: 1 PQGRAPTKAG 10
P GR P KA
Sbjct: 78 PSGRYPVKAS 87


>sp|METK_THEVO|S-ADENOSYLMETHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GRAPTKAG 10
GRA TK G
Sbjct: 91 GRATTKVG 98


>sp|METK_THEAC|S-ADENOSYLMETHIONINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 GRAPTKAG 10
GRA TK G
Sbjct: 91 GRATTKVG 98


>sp|RL22_METJA|LARGE ribosomal subunit protein uL22|Methanocaldococcus jannaschii

Query: 1 PQGRAPTKAG 10
P GR P KA
Sbjct: 81 PAGRYPVKAA 90




120|SequenceR|605|596|PPTPLPQGRA

>sp|DGGGP_SULAC|DIGERANYLGERANYLGLYCERYL phosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PPTPLPQGR 9
P PLP GR
Sbjct: 69 PERPLPSGR 77


>sp|CSD_METTH|PROBABLE cysteine desulfurase|Methanothermobacter thermautotrophicus

Query: 2 PTPLPQGRA 10
PTPLP RA
Sbjct: 29 PTPLPVVRA 37


>sp|DGGGP_SULTO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PPTPLPQGR 9
P PLP GR
Sbjct: 70 PNRPLPSGR 78


>sp|AATD_AERPE|A-TYPE ATP synthase subunit D|Aeropyrum pernix (strain ATCC 700893

Query: 1 PPTPLPQG 8
PP PLP G
Sbjct: 116 PPLPLPAG 123


>sp|DGGGP_METTH|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 PPTPLPQGR 9
P P+P GR
Sbjct: 65 PERPIPSGR 73


>sp|DGGGP_METMA|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PPTPLPQGR 9
P P+P GR
Sbjct: 84 PERPIPSGR 92


>sp|DGGGP_METAC|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PPTPLPQGR 9
P P+P GR
Sbjct: 84 PERPIPSGR 92


>sp|DGGGP_METS3|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PPTPLPQGR 9
P P+P GR
Sbjct: 65 PQRPIPSGR 73


>sp|Y1136_SULTO|PUTATIVE ABC transporter ATP-binding protein|Sulfurisphaera tokodaii (strain

Query: 2 PTPLPQGR 9
P+PLP+ R
Sbjct: 243 PSPLPKKR 250


>sp|DGGGP_METBF|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PPTPLPQGR 9
P P+P GR
Sbjct: 84 PDRPIPSGR 92


>sp|Y289_METJA|UNCHARACTERIZED protein MJ0289|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PTPLPQG 8
PTPLP G
Sbjct: 319 PTPLPSG 325


>sp|GATC_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit C|Saccharolobus solfataricus (strain

Query: 4 PLPQGR 9
PLPQGR
Sbjct: 57 PLPQGR 62


>sp|Y1631_METJA|UNCHARACTERIZED protein MJ1631|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TPLPQG 8
TPLP+G
Sbjct: 195 TPLPEG 200


>sp|GATC_SACI7|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Saccharolobus islandicus (strain

Query: 4 PLPQGR 9
PLPQGR
Sbjct: 57 PLPQGR 62


>sp|GATC_SACI6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Saccharolobus islandicus (strain

Query: 4 PLPQGR 9
PLPQGR
Sbjct: 57 PLPQGR 62


>sp|GATC_SACI4|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Saccharolobus islandicus (strain

Query: 4 PLPQGR 9
PLPQGR
Sbjct: 57 PLPQGR 62


>sp|GATC_SACI3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Saccharolobus islandicus (strain

Query: 4 PLPQGR 9
PLPQGR
Sbjct: 57 PLPQGR 62


>sp|GATC_SACI2|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Saccharolobus islandicus (strain

Query: 4 PLPQGR 9
PLPQGR
Sbjct: 57 PLPQGR 62


>sp|GATC_SACI1|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Saccharolobus islandicus (strain

Query: 4 PLPQGR 9
PLPQGR
Sbjct: 57 PLPQGR 62


>sp|NIFH2_METBA|NITROGENASE iron protein 2|Methanosarcina barkeri

Query: 2 PTPLP 6
PTPLP
Sbjct: 253 PTPLP 257


>sp|DGGGP_METTP|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PPTPLPQGR 9
P P+P GR
Sbjct: 67 PDRPIPSGR 75


>sp|DGGGP_KORCO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 PPTPLPQGR 9
P P+P GR
Sbjct: 69 PYRPIPSGR 77


>sp|MOAA_METKA|PROBABLE GTP 3',8-cyclase|Methanopyrus kandleri (strain AV19 /

Query: 1 PPTPLPQ 7
PP PLP+
Sbjct: 261 PPKPLPR 267


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PPTPLP 6
PP PLP
Sbjct: 523 PPLPLP 528


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 PTPLPQGRA 10
P P QGRA
Sbjct: 3511 PAPQMQGRA 3519


Query: 2 PTPLPQGRA 10
P P QGRA
Sbjct: 4911 PAPQMQGRA 4919


>sp|NIFH_METMA|NITROGENASE iron protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PTPLP 6
PTPLP
Sbjct: 253 PTPLP 257


>sp|FTR_METJA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PPTPLPQGR 9
PP+ P GR
Sbjct: 61 PPSKTPDGR 69


>sp|DGGGP_IGNH4|DIGERANYLGERANYLGLYCERYL phosphate synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PPTPLPQGR 9
P P+P GR
Sbjct: 71 PERPIPSGR 79


>sp|SECD_METJA|PROTEIN-EXPORT membrane protein SecD|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PTPLPQG 8
PT +PQG
Sbjct: 129 PTKIPQG 135


>sp|TRPE1_HALSA|ANTHRANILATE synthase component 1 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 PPTPLPQG 8
PPTPLP
Sbjct: 171 PPTPLPDA 178


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PPTPLPQG 8
P TP+P G
Sbjct: 653 PETPVPSG 660


>sp|PUR1_METTH|AMIDOPHOSPHORIBOSYLTRANSFERASE thermautotrophicus (strain ATCC 29096

Query: 2 PTPLP 6
PTPLP
Sbjct: 456 PTPLP 460


>sp|DGGGP_METKA|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 PPTPLPQGR 9
P P+P GR
Sbjct: 66 PDRPIPSGR 74


>sp|MCR_METS5|MALONYL CoA reductase (NADP)|Metallosphaera sedula (strain ATCC 51363

Query: 3 TPLPQGRA 10
+PLPQG A
Sbjct: 82 SPLPQGAA 89


>sp|RL1_METMJ|LARGE ribosomal subunit protein uL1|Methanoculleus marisnigri (strain

Query: 2 PTPLPQG 8
P P+PQG
Sbjct: 131 PMPVPQG 137




121|SequenceR|610|601|PDPPAPPTPL

>sp|TRUA_THESM|TRNA pseudouridine synthase A|Thermococcus sibiricus (strain DSM 12597

Query: 3 PPAPPTPL 10
PPAPP L
Sbjct: 212 PPAPPENL 219


>sp|TRUA_PYRFU|TRNA pseudouridine synthase A|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PPAPPTPL 10
PPAPP L
Sbjct: 209 PPAPPEGL 216


>sp|TRUA_PYRAB|TRNA pseudouridine synthase A|Pyrococcus abyssi (strain GE5 /

Query: 3 PPAPPTPL 10
PPAPP L
Sbjct: 209 PPAPPEGL 216


>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PDPPAPPT 8
P+P PPT
Sbjct: 100 PNPNGPPT 107


>sp|GATB_SULTO|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfurisphaera tokodaii (strain DSM

Query: 1 PDPPAPPTPL 10
PDP PP P+
Sbjct: 270 PDPDLPPYPI 279


>sp|SERA_ARCFU|D-3-PHOSPHOGLYCERATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DPPAPPTPL 10
+PP+P PL
Sbjct: 259 EPPSPDNPL 267


>sp|TRUA_THEKO|TRNA pseudouridine synthase A|Thermococcus kodakarensis (strain ATCC

Query: 3 PPAPPTPL 10
PPAPP L
Sbjct: 213 PPAPPEGL 220


>sp|PUR7_THEAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PDPPAPPTP 9
P+P PP P
Sbjct: 263 PEPDIPPLP 271


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 DPPAP 6
DPPAP
Sbjct: 62 DPPAP 66


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 PDPPAPPTPL 10
P PP TPL
Sbjct: 36 PSPPRRATPL 45


>sp|RFCL_METLZ|REPLICATION factor C large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 2 DPPAPPTP 9
+PP P TP
Sbjct: 442 EPPVPETP 449


>sp|HCP_METJA|HYDROXYLAMINE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 PPTPL 10
PPTPL
Sbjct: 351 PPTPL 355


>sp|TRUA_THEGJ|TRNA pseudouridine synthase A|Thermococcus gammatolerans (strain DSM

Query: 3 PPAPPTPL 10
PPAPP L
Sbjct: 213 PPAPPENL 220


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 PDPPAPPTPL 10
PDP P P+
Sbjct: 328 PDPSTAPYPV 337


>sp|PRIS_AERPE|DNA primase small subunit PriS|Aeropyrum pernix (strain ATCC 700893

Query: 4 PAPPTP 9
PAPP+P
Sbjct: 192 PAPPSP 197


Query: 1 PDPPAPPTP 9
P PP+P P
Sbjct: 192 PAPPSPDDP 200


>sp|GATE_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 1 PDPPAPPTP 9
PDP A TP
Sbjct: 438 PDPSAVETP 446


>sp|GATE_HALS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 1 PDPPAPPTP 9
PDP A TP
Sbjct: 438 PDPSAVETP 446


>sp|SYE_METBU|GLUTAMATE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PDPPAPPT 8
P+P PPT
Sbjct: 110 PNPNGPPT 117


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 PPAPPTPL 10
PP P TPL
Sbjct: 519 PPTPGTPL 526


>sp|GATB_SULAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfolobus acidocaldarius (strain ATCC

Query: 1 PDPPAPP 7
PDP PP
Sbjct: 270 PDPDLPP 276


>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PDPPAPPT 8
P+P PPT
Sbjct: 107 PNPNGPPT 114


>sp|GATB_SACS2|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 1 PDPPAPP 7
PDP PP
Sbjct: 269 PDPDLPP 275


>sp|NCPP_METKA|PROBABLE inosine/xanthosine triphosphatase|Methanopyrus kandleri (strain

Query: 2 DPPAPPTPL 10
DP PP P+
Sbjct: 37 DPGVPPQPV 45


>sp|GATB_METS3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 1 PDPPAPP 7
PDP PP
Sbjct: 249 PDPDLPP 255


>sp|TRUA_HALMA|TRNA pseudouridine synthase A|Haloarcula marismortui (strain ATCC 43049

Query: 3 PPAPPTPL 10
PPAPP PL
Sbjct: 221 PPAPPEPL 228




122|SequenceR|615|606|APSKFPDPPA

>sp|AROB_PYRAB|3-DEHYDROQUINATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 PSKFPDPP 9
P+K P PP
Sbjct: 278 PTKLPYPP 285


>sp|Y939_SULTO|KELCH domain-containing protein STK_09390|Sulfurisphaera tokodaii (strain

Query: 2 PSKFPDPP 9
PS P+PP
Sbjct: 399 PSSVPNPP 406


>sp|PUR5_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 KFPDPP 9
K PDPP
Sbjct: 242 KMPDPP 247


>sp|SFSA_METST|SUGAR fermentation stimulation protein homolog|Methanosphaera stadtmanae

Query: 3 SKFPDPP 9
+KFPD P
Sbjct: 146 AKFPDAP 152


>sp|SFSA_CALMQ|SUGAR fermentation stimulation protein homolog|Caldivirga maquilingensis

Query: 3 SKFPDPP 9
+KFPD P
Sbjct: 142 AKFPDAP 148


>sp|ASSY_HYPBU|ARGININOSUCCINATE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 APSKFPDPP 9
AP K PD P
Sbjct: 203 APEKAPDQP 211


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PSKFPDP 8
PSKF DP
Sbjct: 298 PSKFVDP 304


>sp|LYSY_NITMS|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 4 KFPDP 8
KFPDP
Sbjct: 281 KFPDP 285


>sp|FPRA_METJA|COENZYME F420H(2) oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KFPDPP 9
KFPD P
Sbjct: 102 KFPDAP 107


>sp|Y236_THEAC|PROTEIN Ta0236|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 SKFPDPPA 10
K PDPPA
Sbjct: 36 EKLPDPPA 43


>sp|ASSY_ARCFU|ARGININOSUCCINATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 APSKFPDPP 9
+P K PD P
Sbjct: 201 SPEKAPDKP 209


>sp|MCRA_METKA|METHYL-COENZYME M reductase I subunit|Methanopyrus kandleri (strain AV19 /

Query: 4 KFPDPPA 10
K+PD PA
Sbjct: 298 KYPDDPA 304


>sp|LYSY_CENSY|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 4 KFPDP 8
KFPDP
Sbjct: 281 KFPDP 285


>sp|PYRH_HYPBU|URIDYLATE kinase|Hyperthermus butylicus (strain DSM 5456

Query: 2 PSKFPDPP 9
P+ +P+PP
Sbjct: 88 PNAYPEPP 95


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 SKFPDPPA 10
+ +PDPPA
Sbjct: 705 AAWPDPPA 712


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 FPDPPA 10
FP+PP+
Sbjct: 266 FPEPPS 271


>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 PSKFPDP 8
P+KF DP
Sbjct: 367 PAKFVDP 373


>sp|PYRB_METLZ|ASPARTATE carbamoyltransferase catalytic subunit|Methanocorpusculum labreanum

Query: 4 KFPDPPA 10
+FPDP A
Sbjct: 231 RFPDPVA 237




123|SequenceR|620|611|LPGKSAPSKF

>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 2 PGKSAPSK 9
PGKSAP K
Sbjct: 578 PGKSAPRK 585


>sp|PELO_AERPE|PROTEIN pelota homolog|Aeropyrum pernix (strain ATCC 700893

Query: 1 LPGKSAPSK 9
LPGK PS+
Sbjct: 159 LPGKDDPSR 167


>sp|SECF_THEGJ|PROTEIN-EXPORT membrane protein SecF|Thermococcus gammatolerans (strain DSM 15229

Query: 2 PGKSAPSK 9
P K+APSK
Sbjct: 111 PAKTAPSK 118


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GKSAPSKF 10
GKS P+KF
Sbjct: 366 GKSMPNKF 373


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 1 LPGKSAPSKF 10
LPGK KF
Sbjct: 135 LPGKDDKEKF 144


>sp|ILVD_METS5|DIHYDROXY-ACID dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 LPGKSAP 7
LPG SAP
Sbjct: 215 LPGSSAP 221




124|SequenceR|625|616|LDTSALPGKS

>sp|Y1506_METJA|UNCHARACTERIZED protein MJ1506|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DTSALPGKS 10
DTS +PGK+
Sbjct: 194 DTSIIPGKT 202


>sp|RF1_ARCFU|PEPTIDE chain release factor subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 DTSALPGK 9
DTS +PGK
Sbjct: 163 DTSMVPGK 170


>sp|IF2P_SULAC|PROBABLE translation initiation factor IF-2|Sulfolobus acidocaldarius

Query: 1 LDTSALPGK 9
L+T LPGK
Sbjct: 463 LETIVLPGK 471


>sp|IF2P_METS5|PROBABLE translation initiation factor IF-2|Metallosphaera sedula (strain

Query: 1 LDTSALPGK 9
LD+ LPGK
Sbjct: 460 LDSLVLPGK 468


>sp|SYR_METPE|ARGININE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 LDTSALPGK 9
LDT A PG+
Sbjct: 170 LDTGAKPGE 178


>sp|IF2P_SULTO|PROBABLE translation initiation factor IF-2|Sulfurisphaera tokodaii (strain

Query: 1 LDTSALPGK 9
LD+ LPGK
Sbjct: 464 LDSLILPGK 472


>sp|Y738_METVS|UPF0210 protein Mevan_0738|Methanococcus vannielii (strain ATCC 35089

Query: 1 LDTSALPGKS 10
LD A+PGK+
Sbjct: 372 LDMIAIPGKT 381


>sp|HLY_NATA1|HALOLYSIN asiatica (strain ATCC 700177

Query: 3 TSALPGKS 10
TSA PG+S
Sbjct: 31 TSATPGRS 38


>sp|HLY_HALMT|HALOLYSIN mediterranei (strain ATCC 33500

Query: 3 TSALPGKS 10
TSA PG+S
Sbjct: 28 TSATPGRS 35


>sp|IF2P_SACS2|PROBABLE translation initiation factor IF-2|Saccharolobus solfataricus

Query: 1 LDTSALPGK 9
DT LPGK
Sbjct: 462 FDTLILPGK 470


>sp|Y1412_META3|UPF0210 protein Maeo_1412|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LDTSALPGKS 10
LD A+PGK+
Sbjct: 372 LDMIAIPGKT 381


>sp|TRM1_METS5|TRNA (guanine(26)-N(2))-dimethyltransferase|Metallosphaera sedula

Query: 2 DTSALPGKS 10
D SAL GKS
Sbjct: 157 DLSALEGKS 165


>sp|Y1427_METMP|UPF0210 protein MMP1427|Methanococcus maripaludis (strain DSM 14266

Query: 1 LDTSALPGKS 10
LD A+PGK+
Sbjct: 372 LDMIAVPGKT 381




125|SequenceR|630|621|TWDTVLDTSA

>sp|ILVC_METAR|KETOL-ACID reductoisomerase (NADP(+))|Methanocella arvoryzae (strain DSM 22066

Query: 2 WDTVLDTS 9
WD+V DT+
Sbjct: 248 WDSVSDTA 255


>sp|ENGB_METJA|PROBABLE GTP-binding protein EngB|Methanocaldococcus jannaschii (strain ATCC

Query: 2 WDTVLD 7
WD VLD
Sbjct: 164 WDAVLD 169


>sp|SYY_THEON|TYROSINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 WDTVLDTS 9
W TV+D S
Sbjct: 131 WQTVIDIS 138


>sp|SYY_THEKO|TYROSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 WDTVLDTS 9
W TV+D S
Sbjct: 131 WQTVIDIS 138


>sp|SYY_THEGJ|TYROSINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 WDTVLDTS 9
W TV+D S
Sbjct: 131 WQTVIDIS 138


>sp|SYY_PYRHO|TYROSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 WDTVLDTS 9
W TV+D S
Sbjct: 131 WQTVIDIS 138


>sp|SYY_PYRFU|TYROSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WDTVLDTS 9
W TV+D S
Sbjct: 131 WQTVIDIS 138


>sp|SYY_PYRAB|TYROSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 WDTVLDTS 9
W TV+D S
Sbjct: 131 WQTVIDIS 138


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 WDTVLDTS 9
WD VLD S
Sbjct: 61 WDKVLDAS 68


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 WDTVLDTS 9
WD VLD S
Sbjct: 61 WDKVLDAS 68


>sp|TYSY_METTM|PUTATIVE thymidylate synthase|Methanothermobacter marburgensis (strain ATCC

Query: 1 TWDTVLDTSA 10
TWD +DT +
Sbjct: 132 TWDPKIDTES 141


>sp|HTR9_HALSA|HALOBACTERIAL transducer protein 9|Halobacterium salinarum (strain ATCC 700922

Query: 1 TWDTVLDTSA 10
T D V+DTSA
Sbjct: 257 TADEVVDTSA 266


>sp|AATE_HALVD|A-TYPE ATP synthase subunit E|Haloferax volcanii (strain ATCC 29605

Query: 1 TWDTVLDT 8
T+D+VLDT
Sbjct: 170 TFDSVLDT 177


>sp|PRIS_METKA|DNA primase small subunit PriS|Methanopyrus kandleri (strain AV19 /

Query: 2 WDTVLDTSA 10
WD V+D A
Sbjct: 77 WDLVIDVDA 85




126|SequenceR|635|626|VSLGCTWDTV

>sp|TSR3_HALSA|16S rRNA aminocarboxypropyltransferase|Halobacterium salinarum

Query: 1 VSLGCTWDT 9
V+L C+W+T
Sbjct: 60 VALDCSWET 68


>sp|TSR3_HALS3|16S rRNA aminocarboxypropyltransferase|Halobacterium salinarum

Query: 1 VSLGCTWDT 9
V+L C+W+T
Sbjct: 60 VALDCSWET 68


>sp|AATB_CENSY|A-TYPE ATP synthase subunit B|Cenarchaeum symbiosum (strain A)

Query: 2 SLGCTWDTV 10
+LG WDTV
Sbjct: 430 TLGIMWDTV 438


>sp|TSR3_METBU|16S rRNA aminocarboxypropyltransferase|Methanococcoides burtonii

Query: 3 LGCTWDTV 10
L C+W+TV
Sbjct: 72 LDCSWETV 79


>sp|GATA_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 2 SLGCTWDTV 10
SLG TW+ V
Sbjct: 279 SLGATWEEV 287


>sp|GLMM_METMP|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain DSM 14266

Query: 5 CTWDTV 10
CTWD +
Sbjct: 127 CTWDNI 132


>sp|TSR3_METS3|16S rRNA aminocarboxypropyltransferase|Methanobrevibacter smithii

Query: 1 VSLGCTWDTV 10
V L C+W+ V
Sbjct: 65 VGLDCSWNEV 74


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 2 SLGCTWD 8
+LG TWD
Sbjct: 124 ALGTTWD 130


>sp|NIFE_METTM|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 4 GCTWD 8
CTWD
Sbjct: 94 ACTWD 98


>sp|NIFE_METMP|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 4 GCTWD 8
CTWD
Sbjct: 101 ACTWD 105


>sp|NIFE_METMI|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 4 GCTWD 8
CTWD
Sbjct: 101 ACTWD 105


>sp|KPRS2_ARCFU|RIBOSE-PHOSPHATE pyrophosphokinase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GCTWD 8
GC WD
Sbjct: 165 GCEWD 169


>sp|NIFE_METTH|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 4 GCTWD 8
CTWD
Sbjct: 91 ACTWD 95


>sp|TIAS_METMA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina mazei (strain

Query: 6 TWDTV 10
TWDTV
Sbjct: 196 TWDTV 200


>sp|TIAS_METLZ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocorpusculum labreanum

Query: 6 TWDTV 10
TWDTV
Sbjct: 194 TWDTV 198


>sp|TIAS_METAC|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina acetivorans

Query: 6 TWDTV 10
TWDTV
Sbjct: 196 TWDTV 200


>sp|TSR3_METMA|16S rRNA aminocarboxypropyltransferase|Methanosarcina mazei (strain

Query: 1 VSLGCTWDTV 10
+ L C+W+ V
Sbjct: 70 IVLDCSWEEV 79


>sp|TSR3_METBF|16S rRNA aminocarboxypropyltransferase|Methanosarcina barkeri (strain

Query: 1 VSLGCTWDTV 10
+ L C+W+ V
Sbjct: 70 IVLDCSWEEV 79


>sp|TSR3_METAC|16S rRNA aminocarboxypropyltransferase|Methanosarcina acetivorans

Query: 1 VSLGCTWDTV 10
+ L C+W+ V
Sbjct: 71 IVLDCSWEEV 80


>sp|Y1296_METAC|PUTATIVE RNase MA_1296|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VSLGCTWDTV 10
V + WDT+
Sbjct: 85 VDINAVWDTI 94




127|SequenceR|644|631|MDGGDTPGLVSLGC

>sp|FAU1_HALSA|PROBABLE ribonuclease FAU-1|Halobacterium salinarum (strain ATCC 700922

Query: 2 DGGDTPGLVS 11
DGGDTPGLV+
Sbjct: 237 DGGDTPGLVA 246


>sp|FAU1_HALS3|PROBABLE ribonuclease FAU-1|Halobacterium salinarum (strain ATCC 29341

Query: 2 DGGDTPGLVS 11
DGGDTPGLV+
Sbjct: 237 DGGDTPGLVA 246


>sp|AGLUS_ARCFU|ARCHAEAL glutamate synthase [NADPH]|Archaeoglobus fulgidus (strain ATCC

Query: 6 TPGLVSLGC 14
TP LV++GC
Sbjct: 415 TPALVAMGC 423


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 4 GDTPGLVSL-GC 14
GD PG+V+L GC
Sbjct: 503 GDIPGVVALVGC 514


>sp|PFP_THETK|PYROPHOSPHATE--FRUCTOSE 6-phosphate 1-phosphotransferase|Thermoproteus tenax (strain ATCC

Query: 3 GGDTPGL 9
GGD PGL
Sbjct: 9 GGDAPGL 15


>sp|UVRB_HALSA|UVRABC system protein B|Halobacterium salinarum (strain ATCC 700922

Query: 1 MDGGDTP 7
+DGGD P
Sbjct: 670 LDGGDAP 676


>sp|PFDA_METLZ|PREFOLDIN subunit alpha|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 GDTPGLVSLG 13
GD P L++LG
Sbjct: 60 GDVPTLLNLG 69


>sp|FLPA_THEVO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermoplasma volcanium (strain

Query: 1 MDGGDTPGLV 10
M GD PGL+
Sbjct: 1 MSKGDRPGLL 10


>sp|AKSA_METMA|HOMOCITRATE synthase AksA|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DGGDTPGLV 10
DG TPG+V
Sbjct: 32 DGEQTPGVV 40


>sp|AKSA_METAC|HOMOCITRATE synthase AksA|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DGGDTPGLV 10
DG TPG+V
Sbjct: 32 DGEQTPGVV 40


>sp|RNP3_METKA|RIBONUCLEASE P protein component 3|Methanopyrus kandleri (strain AV19 /

Query: 7 PGLVSLG 13
PG+VSLG
Sbjct: 238 PGVVSLG 244


>sp|ARNS_SULAC|SERINE/THREONINE-PROTEIN kinase ArnS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 6 TPGLVSLG 13
TPG++ LG
Sbjct: 486 TPGIIKLG 493


>sp|FTSZ2_ARCFU|CELL division protein FtsZ 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 DTPGLVSLGC 14
+TP +V +GC
Sbjct: 28 ETPKIVVVGC 37


>sp|GCSPB_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 3 GGDTPGLV 10
GGDT GL+
Sbjct: 214 GGDTAGLM 221


>sp|AROA_METBU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcoides burtonii (strain DSM

Query: 1 MDGGDTPGLV 10
MD G TP LV
Sbjct: 302 MDAGATPDLV 311


>sp|ARGC_METB6|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoregula boonei (strain DSM 21154

Query: 2 DGGDTPGLV 10
DG D PGL+
Sbjct: 319 DGLDAPGLL 327


>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 4 GDTPGLVSL-GC 14
G TPG+V+L GC
Sbjct: 508 GTTPGIVALVGC 519


>sp|Y1213_METKA|UPF0237 protein MK1213|Methanopyrus kandleri (strain AV19 /

Query: 3 GGDTPGLVS 11
G D PG+V+
Sbjct: 10 GADRPGIVA 18


>sp|MOBA_PYRHO|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus horikoshii

Query: 3 GGDTPGLV 10
GGD P L+
Sbjct: 92 GGDMPSLI 99


>sp|PANB_NITMS|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 GDTPGLVSLG 13
GD+ G+V LG
Sbjct: 43 GDSAGMVMLG 52


>sp|NADB_SULTO|L-ASPARTATE oxidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 MDGGDTP 7
+DGG TP
Sbjct: 32 IDGGSTP 38


>sp|Y4618_METAC|UPF0313 protein MA_4618|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GGDTPGLVSLGC 14
GG T + +GC
Sbjct: 498 GGPTANMYGMGC 509


>sp|GPMI_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MDGGDTPGLVSLG 13
+DG D P +LG
Sbjct: 158 LDGRDVPPKAALG 170


>sp|MTRE_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanopyrus kandleri (strain AV19 /

Query: 8 GLVSLGC 14
GLV+LGC
Sbjct: 262 GLVTLGC 268


>sp|MOBA_PYRAB|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus abyssi (strain

Query: 3 GGDTPGLV 10
GGD P L+
Sbjct: 90 GGDMPSLI 97


>sp|GPMI1_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 MDGGDTPGLVSLG 13
+DG D P +LG
Sbjct: 152 LDGRDVPPKTALG 164


>sp|AGL3_SULAC|UDP-SULFOQUINOVOSE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GGDTPGLVSL 12
GG T G +SL
Sbjct: 258 GGQTRGFISL 267


>sp|Y189_METAR|UPF0313 protein UNCMA_01890|Methanocella arvoryzae (strain DSM 22066

Query: 3 GGDTPGLVSLGC 14
GG T + LGC
Sbjct: 345 GGPTADMYMLGC 356


>sp|COFH_HALMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Haloarcula marismortui (strain ATCC

Query: 4 GDTPGLVSLGC 14
GDT GL L C
Sbjct: 363 GDTQGLKMLTC 373


>sp|ILVC_METS3|KETOL-ACID reductoisomerase (NADP(+))|Methanobrevibacter smithii (strain ATCC

Query: 1 MDGGDTPGLVSL 12
+DG PGLV++
Sbjct: 141 LDGFGIPGLVAI 152


>sp|HMDH_PYRHO|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GGDTPGL 9
GGD PG+
Sbjct: 369 GGDPPGI 375


>sp|AROD_METAR|3-DEHYDROQUINATE dehydratase|Methanocella arvoryzae (strain DSM 22066

Query: 3 GGDTPGLVS 11
GGD PGLV
Sbjct: 36 GGDGPGLVE 44


>sp|RRP41_METKA|EXOSOME complex component Rrp41|Methanopyrus kandleri (strain AV19 /

Query: 1 MDGGDTPG 8
MDG TPG
Sbjct: 201 MDGDMTPG 208


>sp|PMDHL_METTH|PHOSPHOMEVALONATE dehydratase large subunit|Methanothermobacter thermautotrophicus

Query: 5 DTPGLVSLGC 14
D P L+ LGC
Sbjct: 289 DDPDLICLGC 298


>sp|FAU1_SULTO|PROBABLE ribonuclease FAU-1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DGGDTPGLVSLG 13
DG D L+S+G
Sbjct: 50 DGNDKGELISIG 61


>sp|GPMI2_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 MDGGDTPGLVSLG 13
+DG D P +LG
Sbjct: 152 LDGRDEPPKAALG 164


>sp|HMDH_PYRAB|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus abyssi (strain GE5 /

Query: 3 GGDTPGL 9
GGD PG+
Sbjct: 364 GGDPPGV 370


>sp|ORNAT_THEKO|ORNITHINE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 8 GLVSLGC 14
GLV LGC
Sbjct: 405 GLVLLGC 411


>sp|ILVC_METST|KETOL-ACID reductoisomerase (NADP(+))|Methanosphaera stadtmanae (strain ATCC

Query: 2 DGGDTPGLVSL 12
+G TPGL+++
Sbjct: 142 EGFGTPGLIAI 152


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 4 GDTPGLVS-LGC 14
G TPG+++ +GC
Sbjct: 511 GTTPGIIAIIGC 522


>sp|CBID_PICTO|COBALT-PRECORRIN-5B C(1)-methyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 2 DGGDTPGLVS 11
DGGD P + +
Sbjct: 63 DGGDDPDVTT 72


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 4 GDTPGLVS-LGC 14
G TPG+++ +GC
Sbjct: 511 GTTPGIIAIIGC 522


>sp|BIOA_METJA|ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GDTPGLVSLG 13
GDT G +S+G
Sbjct: 152 GDTVGAMSVG 161


>sp|AROA_METAR|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 1 MDGGDTPGLV 10
+D G TP LV
Sbjct: 299 IDAGQTPDLV 308


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 4 GDTPGLVS-LGC 14
G TPG+++ +GC
Sbjct: 512 GTTPGIIAIIGC 523


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 4 GDTPGLVS-LGC 14
G TPG+++ +GC
Sbjct: 512 GTTPGIIAIIGC 523


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 4 GDTPGLVS-LGC 14
G TPG+++ +GC
Sbjct: 512 GTTPGIIAIIGC 523


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 4 GDTPGLVS-LGC 14
G TPG+++ +GC
Sbjct: 512 GTTPGIIAIIGC 523


>sp|RL18_THESM|LARGE ribosomal subunit protein uL18|Thermococcus sibiricus (strain DSM

Query: 3 GGDTPGLVSLG 13
GG+TP LG
Sbjct: 77 GGNTPSAYLLG 87


>sp|RL18_THEON|LARGE ribosomal subunit protein uL18|Thermococcus onnurineus (strain

Query: 3 GGDTPGLVSLG 13
GG+TP LG
Sbjct: 77 GGNTPSAYLLG 87


>sp|RL18_THEKO|LARGE ribosomal subunit protein uL18|Thermococcus kodakarensis (strain

Query: 3 GGDTPGLVSLG 13
GG+TP LG
Sbjct: 77 GGNTPSAYLLG 87


>sp|SRP54_METS3|SIGNAL recognition particle 54 kDa|Methanobrevibacter smithii (strain

Query: 3 GGDTPGL 9
GG+ PGL
Sbjct: 87 GGEAPGL 93


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 6 TPGLVSLG 13
TPG +S+G
Sbjct: 512 TPGTISVG 519


>sp|GATE_HALMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Haloarcula marismortui (strain ATCC

Query: 1 MDGGDTP 7
+DGGD P
Sbjct: 526 VDGGDVP 532


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 4 GDTPGLVS-LGC 14
G TPG+++ +GC
Sbjct: 512 GTTPGIIAIIGC 523




THE END