ZN746_HUMAN Blast Output
Archaea
1|Sequence|1|10|MAEAVAAPIS

>sp|PYRH_PYRIL|URIDYLATE kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 MAEAVAAPI 9
+AEAV AP+
Sbjct: 120 VAEAVKAPV 128




2|Sequence|6|15|AAPISPWTMA

>sp|TIAS_IGNAA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignisphaera aggregans (strain

Query: 3 PISPWTM 9
PIS WT+
Sbjct: 258 PISSWTI 264


>sp|PYRK_METMA|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanosarcina mazei

Query: 1 AAPISPW 7
AAP+SP+
Sbjct: 105 AAPLSPY 111


>sp|PYRK_METAC|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanosarcina acetivorans

Query: 1 AAPISPW 7
AAP+SP+
Sbjct: 105 AAPLSPY 111


>sp|TATCT_HALVD|SEC-INDEPENDENT protein translocase protein TatCt|Haloferax volcanii (strain ATCC

Query: 2 APISPWTMA 10
+P++PW +A
Sbjct: 120 SPVAPWKLA 128


>sp|RS19_CALMQ|SMALL ribosomal subunit protein uS19|Caldivirga maquilingensis (strain

Query: 3 PISPW 7
PISPW
Sbjct: 148 PISPW 152


>sp|SYS2_METBF|TYPE-2 serine--tRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 APISPWTMA 10
A ++PW MA
Sbjct: 391 ARVTPWFMA 399


>sp|EF1A_DESMO|ELONGATION factor 1-alpha|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 3 PISPWT 8
PIS WT
Sbjct: 193 PISAWT 198




3|Sequence|11|20|PWTMAATIQA

***** No hits found ******


4|Sequence|16|25|ATIQAMERKI

>sp|GSA_METS5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Metallosphaera sedula (strain ATCC 51363

Query: 1 ATIQAMERK 9
ATIQ +E+K
Sbjct: 304 ATIQELEKK 312


>sp|HIS8_METTH|HISTIDINOL-PHOSPHATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 ATIQAMERKI 10
A ++AMER++
Sbjct: 56 AAVEAMEREL 65


>sp|Y379_THEGJ|UPF0282 protein TGAM_0379|Thermococcus gammatolerans (strain DSM 15229

Query: 2 TIQAMERKI 10
T+Q M RKI
Sbjct: 51 TLQKMRRKI 59


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ATIQAMERKI 10
ATI +ERK+
Sbjct: 829 ATIDPIERKL 838




5|Sequence|21|30|MERKIESQAA

>sp|PURP2_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 2|Methanosarcina mazei (strain ATCC

Query: 1 MERKIESQA 9
M+R++ES A
Sbjct: 221 MDRRVESNA 229


>sp|PURP_METBF|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 1 MERKIESQA 9
M+R++ES A
Sbjct: 221 MDRRVESNA 229


>sp|PURP_METAC|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina acetivorans (strain ATCC

Query: 1 MERKIESQA 9
M+R++ES A
Sbjct: 221 MDRRVESNA 229


>sp|PURP1_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 1|Methanosarcina mazei (strain ATCC

Query: 1 MERKIESQA 9
M+R++ES A
Sbjct: 221 MDRRVESNA 229




6|Sequence|26|35|ESQAARLLSL

***** No hits found ******


7|Sequence|31|40|RLLSLEGRTG

>sp|MPGS_AERPE|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 RLLSLEGR 8
R+LSL+GR
Sbjct: 22 RVLSLDGR 29


>sp|RNP1_AERPE|RIBONUCLEASE P protein component 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 RLLSLEGRT 9
R+L+LEGR
Sbjct: 48 RILTLEGRV 56




8|Sequence|36|45|EGRTGMAEKK

>sp|SYS2_METTP|TYPE-2 serine--tRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 EGRTGMAE 8
EGRTG+AE
Sbjct: 402 EGRTGLAE 409


>sp|CBIF_METJA|COBALT-PRECORRIN-4 C(11)-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EGRTGMAEK 9
EGRT M EK
Sbjct: 143 EGRTPMPEK 151


>sp|GGGPS_HALMA|GERANYLGERANYLGLYCERYL phosphate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 GRTGMAEKK 10
G TGM E+K
Sbjct: 40 GTTGMTEEK 48


>sp|CCA_PYRFU|CCA-ADDING enzyme|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EGRTGMAEKK 10
EG+ MAEKK
Sbjct: 382 EGKDLMAEKK 391


>sp|AMPPA_THEPD|AMP phosphorylase|Thermofilum pendens (strain DSM 2475

Query: 3 RTGMAEKK 10
RTG AEKK
Sbjct: 376 RTGKAEKK 383


>sp|RS28_METKA|SMALL ribosomal subunit protein eS28|Methanopyrus kandleri (strain AV19

Query: 2 GRTGMA 7
GRTGMA
Sbjct: 22 GRTGMA 27


>sp|DAPB_METLZ|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 GRTGMAEKK 10
GR GM E+K
Sbjct: 176 GREGMTERK 184


>sp|GGGPS_NATPD|GERANYLGERANYLGLYCERYL phosphate synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GRTGMAEKK 10
G TGM E+K
Sbjct: 41 GTTGMTEEK 49


>sp|SYP_AERPE|PROLINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EGRTGMAE 8
EGR G+AE
Sbjct: 424 EGRRGIAE 431




9|Sequence|41|50|MAEKKLADCE

>sp|TRKA1_METMA|TRK system potassium uptake protein|Methanosarcina mazei (strain ATCC

Query: 1 MAEKKLADC 9
M + KLADC
Sbjct: 172 MQDLKLADC 180


>sp|TRKA1_METMZ|TRK system potassium uptake protein|Methanosarcina mazei

Query: 1 MAEKKLADC 9
M + KLADC
Sbjct: 172 MQDLKLADC 180


>sp|Y1244_METJA|UNCHARACTERIZED protein MJ1244|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MAEKKLADCE 10
+ ++KLADC+
Sbjct: 83 LIDEKLADCK 92


>sp|GYRB_HALVD|DNA gyrase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 5 KLADCE 10
KLADC+
Sbjct: 411 KLADCQ 416


>sp|GYRB_HALL2|DNA gyrase subunit B|Haloferax lucentense (strain DSM 14919

Query: 5 KLADCE 10
KLADC+
Sbjct: 411 KLADCQ 416


>sp|Y419_ARCFU|UNCHARACTERIZED protein AF_0419|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MAEKKLADC 9
M KKL DC
Sbjct: 130 MRYKKLVDC 138




10|Sequence|46|55|LADCEKTAVE

>sp|MFNF_METJA|(4- jannaschii (strain ATCC 43067

Query: 1 LADCEKTAVE 10
LADC KT E
Sbjct: 63 LADCYKTKKE 72


>sp|FEN_METMJ|FLAP endonuclease 1|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LADCEKT 7
LADC++T
Sbjct: 9 LADCKET 15


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DCEKTA 8
DC+KTA
Sbjct: 219 DCKKTA 224


>sp|NRPR_METJA|GLOBAL nitrogen regulator NrpR|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LADCEKT 7
DCEKT
Sbjct: 447 FVDCEKT 453




11|Sequence|51|60|KTAVEFGNQL

>sp|GLCD1_HALTV|GLUCOSE 1-dehydrogenase 1|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 KTAVEFGN 8
KTAVEF N
Sbjct: 357 KTAVEFSN 364


>sp|SFSA_CALMQ|SUGAR fermentation stimulation protein homolog|Caldivirga

Query: 2 TAVEFGNQL 10
TAV+ GN+L
Sbjct: 68 TAVDLGNEL 76


>sp|Y1761_METMA|MEMO1 family protein MM_1761|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KTAVEFGNQL 10
+TAVE GN L
Sbjct: 152 ETAVEVGNLL 161


>sp|TYW32_PYRAB|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 KTAVEFGNQL 10
K AVE GN++
Sbjct: 159 KFAVEIGNEM 168


>sp|ADEC_METS3|ADENINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KTAVEFGNQL 10
KTA +FG +L
Sbjct: 523 KTAADFGCKL 532


>sp|HIS4_METBU|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcoides burtonii (strain

Query: 2 TAVEFGNQL 10
TAVE G+Q
Sbjct: 153 TAVEMGSQF 161


>sp|Y1318_METJA|UNCHARACTERIZED protein MJ1318|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 AVEFGNQL 10
AVEFG +L
Sbjct: 183 AVEFGKKL 190




12|Sequence|56|65|FGNQLEGKWA

>sp|Y748_METKA|UPF0212 protein MK0748|Methanopyrus kandleri (strain AV19 /

Query: 2 GNQLEGKW 9
GN++EG W
Sbjct: 61 GNEIEGVW 68


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 QLEGKW 9
Q+EGKW
Sbjct: 538 QIEGKW 543


>sp|PPAC_ARCFU|PROBABLE manganese-dependent inorganic pyrophosphatase|Archaeoglobus

Query: 1 FGNQLEGK 8
FG +LEGK
Sbjct: 290 FGKKLEGK 297


>sp|CDC6_METB6|ORC1-TYPE DNA replication protein|Methanoregula boonei (strain DSM 21154

Query: 3 NQLEGKW 9
NQ+E KW
Sbjct: 418 NQMETKW 424


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 NQLEGKW 9
NQ+E KW
Sbjct: 6 NQMEEKW 12


>sp|RKD3_PYRCJ|ARCADIN-3 calidifontis (strain DSM 21063

Query: 1 FGNQLEGKWA 10
FGN EGK A
Sbjct: 12 FGNTDEGKLA 21


>sp|Y1414_METJA|UNCHARACTERIZED protein MJ1414|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 QLEGKW 9
+LEGKW
Sbjct: 107 KLEGKW 112


>sp|TYW31_PYRAB|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 FGNQLEGKW 9
FG+++ KW
Sbjct: 62 FGDKVNAKW 70


>sp|TYW31_PYRFU|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 FGNQLEGKW 9
FG+++ KW
Sbjct: 62 FGDKVNAKW 70


>sp|TRM56_HALWD|TRNA (cytidine(56)-2'-O)-methyltransferase|Haloquadratum walsbyi (strain

Query: 2 GNQLEGKWA 10
G +LE +WA
Sbjct: 154 GQELEQEWA 162


>sp|TDXH_METTH|PEROXIREDOXIN thermautotrophicus (strain ATCC 29096

Query: 3 NQLEGKW 9
++ EGKW
Sbjct: 24 DEFEGKW 30


>sp|TYW31_PYRHO|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 FGNQLEGKW 9
FG+++ KW
Sbjct: 62 FGDKVNAKW 70


>sp|PYRE_NATPD|OROTATE phosphoribosyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GNQLEGKW 9
GNQ+EG +
Sbjct: 96 GNQIEGDF 103


>sp|SYE_NITMS|GLUTAMATE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 GNQLEGKW 9
GN+LEG++
Sbjct: 479 GNELEGEF 486


>sp|PRIS_STAMF|DNA primase small subunit PriS|Staphylothermus marinus (strain ATCC

Query: 1 FGNQLEGK 8
FGN + GK
Sbjct: 287 FGNSINGK 294


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GNQLEGKW 9
G +EGKW
Sbjct: 368 GKYVEGKW 375


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GNQLEGKW 9
G +EGKW
Sbjct: 363 GKYVEGKW 370


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GNQLEGKW 9
G +EGKW
Sbjct: 362 GKYVEGKW 369


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GNQLEGKW 9
G +EGKW
Sbjct: 362 GRYVEGKW 369




13|Sequence|61|70|EGKWAVLGTL

>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 2 GKWAVLGT 9
GKW VL T
Sbjct: 190 GKWVVLST 197


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GKWAVLGT 9
GKW VL T
Sbjct: 190 GKWVVLST 197


>sp|TOP6A_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 2 GKWAVLGTL 10
G WAV GT+
Sbjct: 180 GGWAVPGTV 188


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GKWAVLG 8
+WAVLG
Sbjct: 222 ARWAVLG 228


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GKWAVLGT 9
GKW VL T
Sbjct: 190 GKWVVLST 197


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 4 WAVLGT 9
WAV+GT
Sbjct: 677 WAVIGT 682


>sp|TOP6A_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GKWAVLGTL 10
G WAV GT+
Sbjct: 177 GGWAVPGTV 185


>sp|TOP6A_PYRFU|TYPE 2 DNA topoisomerase 6|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GKWAVLGTL 10
G WAV GT+
Sbjct: 177 GGWAVPGTV 185


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GKWAVLG 8
+WAVLG
Sbjct: 218 ARWAVLG 224


>sp|TOP6A_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 2 GKWAVLGTL 10
G WAV GT+
Sbjct: 177 GGWAVPGTV 185


>sp|FDHB_METTF|F420-DEPENDENT formate dehydrogenase subunit beta|Methanothermobacter

Query: 2 GKWAVLGTL 10
G W V+G L
Sbjct: 206 GNWGVIGPL 214


>sp|RS11_METTP|SMALL ribosomal subunit protein uS11|Methanothrix thermoacetophila

Query: 1 EGKWAV 6
EGKWA+
Sbjct: 3 EGKWAI 8


>sp|FDHB_METFO|F420-DEPENDENT formate dehydrogenase subunit beta|Methanobacterium formicicum

Query: 2 GKWAVLGTL 10
G W V+G L
Sbjct: 207 GNWGVIGPL 215


>sp|TDXH_METTH|PEROXIREDOXIN thermautotrophicus (strain ATCC 29096

Query: 1 EGKWAVL 7
EGKW +L
Sbjct: 27 EGKWFIL 33


>sp|HUTU_HALSA|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GKWAVLGT 9
G WA +GT
Sbjct: 144 GSWAYIGT 151


>sp|HUTU_HALS3|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 29341

Query: 2 GKWAVLGT 9
G WA +GT
Sbjct: 144 GSWAYIGT 151


>sp|DPHB_PYRCJ|DIPHTHINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EGKWAVLGT 9
EGK AVL T
Sbjct: 72 EGKRAVLAT 80


>sp|PDXT_THEAC|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Thermoplasma acidophilum (strain

Query: 2 GKWAVLGTL 10
GK VLGTL
Sbjct: 146 GKTEVLGTL 154


>sp|CAS1B_METRM|CRISPR-ASSOCIATED protein Cas1 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 EGKWAVLGTL 10
E + AVLGTL
Sbjct: 111 ENQKAVLGTL 120


>sp|BACR1_HALWD|BACTERIORHODOPSIN-I walsbyi (strain DSM 16790

Query: 1 EGKWAVLGTL 10
EG W LGT+
Sbjct: 16 EGIWLALGTI 25


>sp|BACR1_HALWC|BACTERIORHODOPSIN-I walsbyi (strain DSM 16854

Query: 1 EGKWAVLGTL 10
EG W LGT+
Sbjct: 16 EGIWLALGTI 25


>sp|GYAR_KORCO|GLYOXYLATE reductase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 EGKWAV 6
EGKW V
Sbjct: 128 EGKWKV 133


>sp|TDXH_METMA|PEROXIREDOXIN mazei (strain ATCC BAA-159

Query: 1 EGKWAVL 7
+GKW +L
Sbjct: 27 KGKWVIL 33


>sp|BACR2_HALMA|BACTERIORHODOPSIN-II marismortui (strain ATCC 43049

Query: 1 EGKWAVLGTL 10
EG W LGT+
Sbjct: 14 EGIWLALGTV 23


>sp|TDXH2_SULTO|PEROXIREDOXIN 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EGKWAVL 7
+GKW VL
Sbjct: 32 QGKWFVL 38




14|Sequence|66|75|VLGTLLQEYG

>sp|HIS4_METPE|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanosphaerula palustris

Query: 1 VLGTLLQEYG 10
VLGTL EYG
Sbjct: 111 VLGTLASEYG 120


>sp|GLYA_HALSA|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 VLGTLLQEYG 10
VLG LQE+G
Sbjct: 293 VLGERLQEHG 302


>sp|GLYA_HALS3|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VLGTLLQEYG 10
VLG LQE+G
Sbjct: 293 VLGERLQEHG 302


>sp|NTPPA_METBU|DTTP/UTP pyrophosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LGTLLQEYG 10
LGT+L+E G
Sbjct: 180 LGTILEEMG 188


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 1 VLGTLLQEYG 10
+ T+L+EYG
Sbjct: 562 IYSTILEEYG 571


>sp|IDI2_HALSA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Halobacterium salinarum (strain ATCC 700922

Query: 2 LGTLLQEYG 10
+GTL +E+G
Sbjct: 247 IGTLFREWG 255


>sp|G1PDH_ARCFU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LGTLLQEY 9
LGT++ EY
Sbjct: 269 LGTIIMEY 276


>sp|TFE_PYRAB|TRANSCRIPTION factor E|Pyrococcus abyssi (strain GE5 /

Query: 1 VLGTLLQEY 9
+ G +LQEY
Sbjct: 138 ICGEILQEY 146




15|Sequence|71|80|LQEYGLLQRR

>sp|MTIP_METTH|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanothermobacter

Query: 1 LQEYGLLQRR 10
+ EYG L+RR
Sbjct: 13 MAEYGRLERR 22


>sp|DAPA_META3|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LQEYGLL 7
L+EYGLL
Sbjct: 282 LKEYGLL 288


>sp|AATA_CENSY|A-TYPE ATP synthase subunit A|Cenarchaeum symbiosum (strain A)

Query: 2 QEYGLLQR 9
+ YG+LQR
Sbjct: 461 EAYGILQR 468


>sp|ASRAC_PYRHO|ALANINE/SERINE racemase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LQEYGLL 7
L+EYG+L
Sbjct: 269 LEEYGIL 275


>sp|SYK_CENSM|LYSINE--TRNA ligase|Cenarchaeum symbiosum

Query: 1 LQEYGLLQR 9
+ EYG LQR
Sbjct: 340 MDEYGDLQR 348


>sp|SYK_CENSY|LYSINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 LQEYGLLQR 9
+ EYG LQR
Sbjct: 341 MDEYGDLQR 349


>sp|RL19E_PYRFU|LARGE ribosomal subunit protein eL19|Pyrococcus furiosus (strain ATCC

Query: 1 LQEYGLLQR 9
L+E+GLL++
Sbjct: 142 LEEHGLLKK 150




16|Sequence|76|85|LLQRRLENVE

>sp|G1PDH_HALLT|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 LQRRLENVE 10
L RRL NVE
Sbjct: 181 LARRLRNVE 189


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 4 RRLENVE 10
+RLENVE
Sbjct: 126 KRLENVE 132


>sp|DNLI2_THEPD|DNA ligase 2|Thermofilum pendens (strain DSM 2475

Query: 1 LLQRRLENV 9
L RRLEN+
Sbjct: 282 LFSRRLENI 290


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 LLQRRLENV 9
+ RRLEN+
Sbjct: 278 IFSRRLENI 286


>sp|DNLI_METBU|DNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LLQRRLENV 9
+ RRLENV
Sbjct: 279 IFSRRLENV 287


>sp|DNLI_THEFM|DNA ligase|Thermococcus fumicolans

Query: 1 LLQRRLENV 9
+ RRLENV
Sbjct: 266 IYSRRLENV 274


>sp|DNLI_SACS2|DNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LLQRRLENV 9
+ RRLEN+
Sbjct: 277 IFSRRLENI 285


>sp|DNLI_SACI1|DNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LLQRRLENV 9
+ RRLEN+
Sbjct: 277 IFSRRLENI 285


>sp|DNLI_SACI7|DNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LLQRRLENV 9
+ RRLEN+
Sbjct: 277 IFSRRLENI 285


>sp|DNLI_SACI6|DNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LLQRRLENV 9
+ RRLEN+
Sbjct: 277 IFSRRLENI 285


>sp|DNLI_SACI4|DNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LLQRRLENV 9
+ RRLEN+
Sbjct: 277 IFSRRLENI 285


>sp|DNLI_SACI3|DNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 LLQRRLENV 9
+ RRLEN+
Sbjct: 277 IFSRRLENI 285


>sp|DNLI_SACI2|DNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LLQRRLENV 9
+ RRLEN+
Sbjct: 277 IFSRRLENI 285


>sp|DNLI_SACSH|DNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 LLQRRLENV 9
+ RRLEN+
Sbjct: 277 IFSRRLENI 285


>sp|DNLI_HYPBU|DNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 LLQRRLENV 9
+ RRLEN+
Sbjct: 285 IFSRRLENI 293


>sp|DNLI_IGNH4|DNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LLQRRLENV 9
+ RRLEN+
Sbjct: 276 IFSRRLENI 284


>sp|DNLI2_METBF|DNA ligase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 LLQRRLENV 9
L R+LENV
Sbjct: 273 LFSRKLENV 281




17|Sequence|81|90|LENVENLLRN

>sp|RADA_METJA|DNA repair and recombination protein|Methanocaldococcus jannaschii

Query: 2 ENVENLLR 9
ENVENL+R
Sbjct: 223 ENVENLIR 230


>sp|Y312_METJA|UNCHARACTERIZED protein MJ0312|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LENVENLLRN 10
LENVE LL+N
Sbjct: 97 LENVEELLKN 106


>sp|SYP_PYRIL|PROLINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 NVENLLR 9
NVENL+R
Sbjct: 55 NVENLIR 61


>sp|SYP_PYRAE|PROLINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 NVENLLR 9
NVENL+R
Sbjct: 55 NVENLIR 61


>sp|SYK_METTH|LYSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LENVENLLR 9
+ENV+N LR
Sbjct: 436 IENVKNWLR 444


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 2 ENVENLLR 9
E VENLLR
Sbjct: 339 EEVENLLR 346


>sp|RL5_METAC|LARGE ribosomal subunit protein uL5|Methanosarcina acetivorans (strain

Query: 1 LENVENLLRN 10
L N E++LRN
Sbjct: 22 LVNAEDILRN 31


>sp|KHSE_METJA|HOMOSERINE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LENVENLLRN 10
++ VEN+LR+
Sbjct: 270 IDEVENILRD 279


>sp|RAD50_PYRHO|DNA double-strand break repair Rad50|Pyrococcus horikoshii (strain ATCC

Query: 2 ENVENLLRN 10
EN+E+L+R
Sbjct: 192 ENIEDLIRT 200


>sp|GUAAB_SULTO|GMP synthase [glutamine-hydrolyzing] subunit B|Sulfurisphaera

Query: 2 ENVENLLRN 10
ENV+N+L++
Sbjct: 65 ENVKNMLKD 73




18|Sequence|86|95|NLLRNRNFWI

>sp|FDHD_PICTO|SULFUR carrier protein FdhD|Picrophilus torridus (strain ATCC 700027

Query: 1 NLLRNRNFWI 10
+LL+NRNF++
Sbjct: 92 DLLKNRNFYV 101


>sp|HELS_ARCFU|ATP-DEPENDENT DNA helicase Hel308|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NLLRNRNFWI 10
+L+RNR WI
Sbjct: 127 SLIRNRASWI 136


>sp|SYN_THEVO|ASPARAGINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LLRNRNFWI 10
LL NR+ W+
Sbjct: 113 LLDNRHLWL 121


>sp|HELS_METBF|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina barkeri (strain Fusaro /

Query: 1 NLLRNRNFWI 10
+LLRN W+
Sbjct: 126 SLLRNETVWM 135


>sp|PTH_CALMQ|PEPTIDYL-TRNA hydrolase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 LRNRNFWI 10
LRNR W+
Sbjct: 37 LRNRGDWV 44


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 2 LLRNRNFW 9
L R+RN W
Sbjct: 488 LTRSRNVW 495


>sp|SYN_THEAC|ASPARAGINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LLRNRNFWI 10
LL NR+ W+
Sbjct: 113 LLDNRHLWL 121


>sp|HIS8_SULTO|HISTIDINOL-PHOSPHATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NLLRNRNFW 9
NL+ N N+W
Sbjct: 132 NLIENDNWW 140


>sp|RNP3_METM7|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C7 /

Query: 1 NLLRNRNF 8
NLL++RN+
Sbjct: 139 NLLKSRNY 146


>sp|RNP3_METM6|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C6 /

Query: 1 NLLRNRNF 8
NLL++RN+
Sbjct: 139 NLLKSRNY 146




19|Sequence|91|100|RNFWILRLPP

>sp|Y875_METJA|UNCHARACTERIZED protein MJ0875|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RNFWILRLPP 10
RN W+LRLPP
Sbjct: 523 RNDWLLRLPP 532


>sp|Y978_PYRFU|UPF0252 protein PF0978|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RNFWILRLP 9
R WIL++P
Sbjct: 251 RRAWILKIP 259


>sp|Y2132_ARCFU|UNCHARACTERIZED protein AF_2132|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FWILRLPP 10
FW+L +PP
Sbjct: 22 FWLLAVPP 29


>sp|Y303_ARCFU|UNCHARACTERIZED protein AF_0303|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NFWILRLPP 10
+FW+L PP
Sbjct: 5 HFWVLSKPP 13


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FWILRLPP 10
FW LPP
Sbjct: 768 FWNFSLPP 775


>sp|COFD_ARCFU|2-PHOSPHO-L-LACTATE transferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RNFWILR 7
+ FW+LR
Sbjct: 145 QEFWVLR 151




20|Sequence|96|105|LRLPPGSKGE

>sp|Y1628_METJA|UNCHARACTERIZED protein MJ1628|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RLPPGSKG 9
+LPPG KG
Sbjct: 313 KLPPGIKG 320


>sp|Y229_SULTO|PROTEIN STK_02290|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 RLPPGSKGE 10
R PP SKGE
Sbjct: 101 RFPPLSKGE 109


>sp|HIS5_METTH|IMIDAZOLE glycerol phosphate synthase subunit|Methanothermobacter

Query: 1 LRLPPGSK 8
+R+PPG+K
Sbjct: 104 IRIPPGNK 111


>sp|RNZ_HALVD|RIBONUCLEASE Z|Haloferax volcanii (strain ATCC 29605

Query: 4 PPGSKG 9
PPGSKG
Sbjct: 91 PPGSKG 96


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 LPPGSKGE 10
LPPG K E
Sbjct: 864 LPPGEKPE 871


>sp|THII_PYRAE|TRNA sulfurtransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 LPPGSKGE 10
+PP S+GE
Sbjct: 474 VPPSSQGE 481


>sp|COOS_METJA|CARBON monoxide dehydrogenase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 LPPGSKGE 10
LP G+KGE
Sbjct: 176 LPGGAKGE 183


>sp|AMTAB_PYRHO|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 3 LPPGSKGE 10
LP G KGE
Sbjct: 398 LPEGRKGE 405


>sp|HEM3_THEAC|PROBABLE porphobilinogen deaminase|Thermoplasma acidophilum (strain ATCC

Query: 2 RLPPGS 7
+LPPGS
Sbjct: 112 KLPPGS 117


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LRLPPGSKGE 10
+ +PPG GE
Sbjct: 147 IMVPPGVSGE 156


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 1 LRLPPGSKGE 10
+ +PPG +GE
Sbjct: 149 IMVPPGIEGE 158


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LRLPPGSKGE 10
+ +PPG +GE
Sbjct: 149 IMVPPGIEGE 158


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LRLPPGSKGE 10
+ +PPG +GE
Sbjct: 149 IMVPPGIEGE 158




21|Sequence|101|110|GSKGESPKEW

>sp|RL1_PYRAE|LARGE ribosomal subunit protein uL1|Pyrobaculum aerophilum (strain ATCC

Query: 1 GSKGESPKE 9
GS+G+SPKE
Sbjct: 169 GSEGQSPKE 177


>sp|ATGT_METS3|TRNA-GUANINE(15) transglycosylase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 SKGESPKEW 10
S+ ESP+ W
Sbjct: 449 SQNESPRTW 457


>sp|FLPA_NANEQ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Nanoarchaeum equitans (strain

Query: 2 SKGESPKEW 10
SKGE +EW
Sbjct: 44 SKGEEYREW 52


>sp|SYP_NANEQ|PROLINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 KGESPKEW 10
K E+PKEW
Sbjct: 4 KSENPKEW 11


>sp|PUS10_PICTO|TRNA pseudouridine synthase Pus10|Picrophilus torridus (strain ATCC

Query: 1 GSKGESPKE 9
GSKGES K+
Sbjct: 104 GSKGESIKK 112


>sp|TRPD_METB6|ANTHRANILATE phosphoribosyltransferase|Methanoregula boonei (strain DSM 21154

Query: 2 SKGESPKE 9
+KGE+P+E
Sbjct: 47 AKGETPEE 54


>sp|TRPD_METPE|ANTHRANILATE phosphoribosyltransferase|Methanosphaerula palustris (strain ATCC

Query: 3 KGESPKE 9
KGESP E
Sbjct: 47 KGESPAE 53


>sp|MCRX_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 3 KGESPKE 9
KGESP+E
Sbjct: 18 KGESPEE 24


>sp|RPO10_METJA|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanocaldococcus jannaschii

Query: 3 KGESPKE 9
KGE+PK+
Sbjct: 27 KGENPKD 33


>sp|RS15_PYRAB|SMALL ribosomal subunit protein uS15|Pyrococcus abyssi (strain GE5 /

Query: 3 KGESPKEW 10
KG+ PK+W
Sbjct: 139 KGKLPKDW 146


>sp|TRPD_PYRAR|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum arsenaticum (strain DSM

Query: 3 KGESPKE 9
+GESP+E
Sbjct: 48 RGESPEE 54


>sp|DTDA_HALSA|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 700922

Query: 4 GESPKEW 10
G SP EW
Sbjct: 146 GSSPAEW 152


>sp|DTDA_HALS3|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 29341

Query: 4 GESPKEW 10
G SP EW
Sbjct: 146 GSSPAEW 152


>sp|RNJ_HALSA|RIBONUCLEASE J|Halobacterium salinarum (strain ATCC 700922

Query: 1 GSKGESPKE 9
G KG +P E
Sbjct: 212 GKKGRTPSE 220


>sp|RS15_PYRHO|SMALL ribosomal subunit protein uS15|Pyrococcus horikoshii (strain ATCC

Query: 3 KGESPKEW 10
KG+ P++W
Sbjct: 139 KGKLPRDW 146


>sp|RS15_PYRFU|SMALL ribosomal subunit protein uS15|Pyrococcus furiosus (strain ATCC

Query: 3 KGESPKEW 10
KG+ PK W
Sbjct: 139 KGKLPKNW 146


>sp|TRPD_METMA|ANTHRANILATE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SKGESPKE 9
+KG SPKE
Sbjct: 264 TKGGSPKE 271


>sp|PRIL_METJA|DNA primase large subunit PriL|Methanocaldococcus jannaschii (strain

Query: 3 KGESPKEW 10
KG P EW
Sbjct: 240 KGNIPLEW 247


>sp|Y008_METKA|UNCHARACTERIZED protein MK0008|Methanopyrus kandleri (strain AV19 /

Query: 1 GSKGESPKE 9
G KG++P E
Sbjct: 53 GKKGQNPDE 61




22|Sequence|106|115|SPKEWGKLED

>sp|CPGS_PYRAB|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus abyssi (strain GE5 /

Query: 2 PKEWGKLE 9
PKEW KLE
Sbjct: 109 PKEWIKLE 116


>sp|AROD_METB6|3-DEHYDROQUINATE dehydratase|Methanoregula boonei (strain DSM 21154

Query: 1 SPKEWGK 7
SP+EW K
Sbjct: 66 SPEEWAK 72


>sp|TRUD1_METMP|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain

Query: 2 PKEWGKL 8
PKE+GKL
Sbjct: 75 PKEYGKL 81


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SPKEWG 6
SPK WG
Sbjct: 311 SPKMWG 316


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 PKEWGKLED 10
P+EW KL D
Sbjct: 198 PEEWRKLRD 206


>sp|Y286_KORCO|UPF0282 protein Kcr_0286|Korarchaeum cryptofilum (strain OPF8)

Query: 2 PKEWGKLE 9
PKEW ++E
Sbjct: 46 PKEWERME 53


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PKEWGKLE 9
P +WGK++
Sbjct: 1086 PSKWGKIQ 1093


>sp|GCSPA_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 1 SPKEWGKL 8
SP+EW L
Sbjct: 40 SPEEWDSL 47


>sp|RS4E_METHJ|SMALL ribosomal subunit protein eS4|Methanospirillum hungatei JF-1

Query: 1 SPKEWG 6
SPK WG
Sbjct: 10 SPKSWG 15


>sp|NEP1_PYRHO|RIBOSOMAL RNA small subunit methyltransferase|Pyrococcus horikoshii (strain

Query: 2 PKEWGKLED 10
PK +GKL D
Sbjct: 165 PKNFGKLLD 173


>sp|MOAA_METKA|PROBABLE GTP 3',8-cyclase|Methanopyrus kandleri (strain AV19 /

Query: 1 SPKEWGKL 8
S EWG+L
Sbjct: 40 SAAEWGRL 47


>sp|HMGCS_METTP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 WGKLED 10
WG++ED
Sbjct: 26 WGEVED 31


>sp|HYD1B_PYRFU|SULFHYDROGENASE 1 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KEWGKL 8
K+WGKL
Sbjct: 19 KDWGKL 24


>sp|RS9_DESA1|SMALL ribosomal subunit protein uS9|Desulfurococcus amylolyticus (strain

Query: 2 PKEWGK 7
PK+WG+
Sbjct: 123 PKKWGR 128


>sp|GCSH_AERPE|PROBABLE glycine cleavage system H|Aeropyrum pernix (strain ATCC 700893

Query: 4 EWGKLED 10
EW +LED
Sbjct: 28 EWARLED 34


>sp|HMGCS_ARCFU|HYDROXYMETHYLGLUTARYL-COA synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PKEWGKLE 9
PK W K+E
Sbjct: 317 PKVWEKIE 324


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 1 SPKEWGKLED 10
+PKE GK D
Sbjct: 961 APKEVGKFVD 970


>sp|ILVE_ARCFU|PUTATIVE branched-chain-amino-acid aminotransferase|Archaeoglobus fulgidus

Query: 3 KEWGKL 8
K WGKL
Sbjct: 116 KPWGKL 121


>sp|EF2_SACS2|ELONGATION factor 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PKEWGKLED 10
PKE K+ED
Sbjct: 725 PKELPKVED 733


>sp|CPGS_PYRHO|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus horikoshii (strain

Query: 2 PKEWGKLE 9
PKEW K++
Sbjct: 113 PKEWIKID 120


>sp|EF2_SACI7|ELONGATION factor 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 PKEWGKLED 10
PKE K+ED
Sbjct: 725 PKELPKVED 733


>sp|EF2_SACI6|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.4 /

Query: 2 PKEWGKLED 10
PKE K+ED
Sbjct: 725 PKELPKVED 733


>sp|EF2_SACI4|ELONGATION factor 2|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PKEWGKLED 10
PKE K+ED
Sbjct: 725 PKELPKVED 733


>sp|EF2_SACI3|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 PKEWGKLED 10
PKE K+ED
Sbjct: 725 PKELPKVED 733


>sp|EF2_SACI2|ELONGATION factor 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 PKEWGKLED 10
PKE K+ED
Sbjct: 725 PKELPKVED 733


>sp|EF2_SACI1|ELONGATION factor 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 PKEWGKLED 10
PKE K+ED
Sbjct: 725 PKELPKVED 733


>sp|SRP19_HALWD|SIGNAL recognition particle 19 kDa|Haloquadratum walsbyi (strain DSM

Query: 2 PKEWG 6
P+EWG
Sbjct: 58 PREWG 62


>sp|TRUD2_METJA|PROBABLE tRNA pseudouridine synthase D|Methanocaldococcus jannaschii (strain

Query: 2 PKEWGKL 8
PK++GKL
Sbjct: 101 PKKYGKL 107


>sp|EF2_METS5|ELONGATION factor 2|Metallosphaera sedula (strain ATCC 51363

Query: 2 PKEWGKLED 10
PKE K+ED
Sbjct: 725 PKELPKVED 733


>sp|EF2_SULTO|ELONGATION factor 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PKEWGKLED 10
PKE K+ED
Sbjct: 726 PKELPKVED 734


>sp|NEP1_PYRAB|RIBOSOMAL RNA small subunit methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 PKEWGKLED 10
PK +GKL D
Sbjct: 165 PKNFGKLLD 173




23|Sequence|111|120|GKLEDWQKEL

>sp|YC8A_METJA|UNCHARACTERIZED protein MJ1282.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GKLEDWQK 8
G +EDW+K
Sbjct: 15 GAVEDWRK 22


>sp|TRPB2_THEKO|TRYPTOPHAN synthase beta chain 2|Thermococcus kodakarensis (strain ATCC

Query: 1 GKLEDWQKE 9
GKLED++ E
Sbjct: 426 GKLEDYEPE 434


>sp|TRPB_THEON|TRYPTOPHAN synthase beta chain|Thermococcus onnurineus (strain NA1)

Query: 1 GKLEDWQKE 9
GKLED++ E
Sbjct: 426 GKLEDYEPE 434


>sp|NPD_THESM|NAD-DEPENDENT protein deacylase|Thermococcus sibiricus (strain DSM 12597

Query: 1 GKLEDWQKE 9
GKLED+ KE
Sbjct: 137 GKLEDFLKE 145


>sp|RL29_SULTO|LARGE ribosomal subunit protein uL29|Sulfurisphaera tokodaii (strain

Query: 1 GKLEDWQKEL 10
GKL D Q+EL
Sbjct: 31 GKLNDLQQEL 40


>sp|TRPB_PYRHO|TRYPTOPHAN synthase beta chain|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GKLEDWQKEL 10
GKLED++ ++
Sbjct: 437 GKLEDYEPQI 446


>sp|TAL_THEVO|PROBABLE transaldolase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 LEDWQK 8
LEDW+K
Sbjct: 209 LEDWKK 214


>sp|TAL_THEAC|PROBABLE transaldolase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 LEDWQK 8
LEDW+K
Sbjct: 209 LEDWKK 214


>sp|XPB1_SULTO|DNA 3'-5' helicase/translocase StoXPB1|Sulfurisphaera tokodaii (strain

Query: 1 GKLEDWQKE 9
G+L D+QKE
Sbjct: 157 GELRDYQKE 165


>sp|TRUD_METKA|PROBABLE tRNA pseudouridine synthase D|Methanopyrus kandleri (strain AV19 /

Query: 3 LEDWQK 8
LEDW+K
Sbjct: 188 LEDWEK 193


>sp|IDI2_METS5|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Metallosphaera sedula (strain ATCC 51363

Query: 1 GKLEDW 6
GKL+DW
Sbjct: 343 GKLKDW 348


>sp|RPO3_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermoplasma acidophilum (strain ATCC

Query: 3 LEDWQK 8
EDWQK
Sbjct: 184 FEDWQK 189


>sp|AGLUS_ARCFU|ARCHAEAL glutamate synthase [NADPH]|Archaeoglobus fulgidus (strain ATCC

Query: 3 LEDWQKEL 10
LEDW+ E+
Sbjct: 496 LEDWELEV 503


>sp|Y2042_PYRFU|UPF0215 protein PF2042|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LEDWQKEL 10
EDW+K +
Sbjct: 123 FEDWEKRM 130


>sp|DNLI_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GKLEDWQK 8
G LEDW +
Sbjct: 242 GALEDWDR 249


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 EDWQKEL 10
E+WQKE+
Sbjct: 1008 EEWQKEI 1014


>sp|RS5_SULAC|SMALL ribosomal subunit protein uS5|Sulfolobus acidocaldarius (strain

Query: 2 KLEDWQ 7
KLEDW+
Sbjct: 9 KLEDWK 14


>sp|Y1403_METJA|UNCHARACTERIZED protein MJ1403|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GKLEDWQK 8
GK+ DW K
Sbjct: 16 GKMMDWLK 23


>sp|TRPB_THEGJ|TRYPTOPHAN synthase beta chain|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GKLEDWQKE 9
GKLED++ +
Sbjct: 426 GKLEDYEPD 434


>sp|SPSS1_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocella arvoryzae (strain DSM 22066

Query: 2 KLEDWQKEL 10
K E W+KE+
Sbjct: 281 KPESWEKEV 289


>sp|TRPA_METM5|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C5 /

Query: 2 KLEDWQKEL 10
KLE++ KEL
Sbjct: 238 KLEEFAKEL 246


>sp|RL15E_META3|LARGE ribosomal subunit protein eL15|Methanococcus aeolicus (strain

Query: 1 GKLEDWQKE 9
+++DW+KE
Sbjct: 25 ARMQDWRKE 33


>sp|MOAA_METAC|PROBABLE GTP 3',8-cyclase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KLEDWQK 8
KLE WQ+
Sbjct: 328 KLEKWQE 334


>sp|Y1441_METTH|UPF0285 protein MTH_1441|Methanothermobacter thermautotrophicus (strain

Query: 1 GKLEDWQKEL 10
GKL+D KE+
Sbjct: 288 GKLKDMVKEI 297


>sp|TRPB2_PYRAB|TRYPTOPHAN synthase beta chain 2|Pyrococcus abyssi (strain GE5 /

Query: 1 GKLEDWQ 7
GKLED++
Sbjct: 426 GKLEDYE 432


>sp|GCSPB_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 KLEDWQKEL 10
+LE W KE+
Sbjct: 119 ELEQWLKEI 127


>sp|AATA_META3|A-TYPE ATP synthase subunit A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 LEDWQKE 9
+EDW KE
Sbjct: 442 IEDWWKE 448


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GKLEDWQKEL 10
G +EDW+K +
Sbjct: 291 GFIEDWKKSV 300


>sp|PMDHL_METMA|PHOSPHOMEVALONATE dehydratase large subunit|Methanosarcina mazei (strain ATCC

Query: 3 LEDWQK 8
LEDW++
Sbjct: 82 LEDWER 87


>sp|Y309_METM7|UPF0235 protein MmarC7_0309|Methanococcus maripaludis (strain C7 /

Query: 1 GKLEDWQKEL 10
GK+ +W+K +
Sbjct: 29 GKINEWRKRI 38


>sp|Y1603_METM6|UPF0235 protein MmarC6_1603|Methanococcus maripaludis (strain C6 /

Query: 1 GKLEDWQKEL 10
GK+ +W+K +
Sbjct: 29 GKINEWRKRI 38


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 KLEDWQKEL 10
+LE W KE+
Sbjct: 119 ELEQWLKEI 127


>sp|Y1055_METMP|UPF0235 protein MMP1055|Methanococcus maripaludis (strain DSM 14266

Query: 1 GKLEDWQKEL 10
GK+ +W+K +
Sbjct: 29 GKINEWRKRI 38


>sp|Y538_METM5|UPF0235 protein MmarC5_0538|Methanococcus maripaludis (strain C5 /

Query: 1 GKLEDWQKEL 10
GK+ +W+K +
Sbjct: 29 GKINEWRKRI 38


>sp|GCSPB_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 2 KLEDWQKEL 10
+LE W KE+
Sbjct: 119 ELEQWLKEI 127




24|Sequence|116|125|WQKELYKHVM

>sp|Y1361_METJA|UNCHARACTERIZED protein MJ1361|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WQKELYKHV 9
W +ELYK +
Sbjct: 146 WAEELYKEI 154


>sp|LEUD1_PYRAB|3-ISOPROPYLMALATE dehydratase small subunit 1|Pyrococcus abyssi (strain GE5 /

Query: 3 KELYKHVM 10
KEL KHV+
Sbjct: 31 KELAKHVL 38


>sp|Y665_METJA|UNCHARACTERIZED protein MJ0665|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QKELYKHV 9
QKE+Y+ V
Sbjct: 232 QKEIYREV 239


>sp|Y1157_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KELYKHV 9
KEL+KH+
Sbjct: 103 KELFKHI 109


>sp|NCPP_CALMQ|PROBABLE inosine/xanthosine triphosphatase|Caldivirga maquilingensis (strain

Query: 1 WQKELYK 7
W K+LY+
Sbjct: 172 WNKDLYE 178


>sp|Y1524_METJA|UPF0166 protein MJ1524|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 LYKHVM 10
+YKH+M
Sbjct: 22 MYKHIM 27


>sp|EF2_ARCFU|ELONGATION factor 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KELYKHV 9
KE+Y+H+
Sbjct: 222 KEVYEHI 228




25|Sequence|121|130|YKHVMRGNYE

>sp|PRIS_METHJ|DNA primase small subunit PriS|Methanospirillum hungatei JF-1 (strain

Query: 3 HVMRGNYE 10
H+MRG+YE
Sbjct: 105 HIMRGSYE 112


>sp|ARGB_METB6|ACETYLGLUTAMATE kinase|Methanoregula boonei (strain DSM 21154

Query: 1 YKHVMRGNYE 10
Y H++ GN E
Sbjct: 262 YSHIINGNVE 271


>sp|Y541_ARCFU|UNCHARACTERIZED protein AF_0541|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YKHVMRGN 8
Y++ MRGN
Sbjct: 98 YRYAMRGN 105


>sp|ISF1_ARCFU|IRON-SULFUR flavoprotein AF_1436|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YKHVMRGNYE 10
Y H+M+ +YE
Sbjct: 203 YGHLMKADYE 212


>sp|PRIS_METPE|DNA primase small subunit PriS|Methanosphaerula palustris (strain ATCC

Query: 3 HVMRGNYE 10
H+M G+Y+
Sbjct: 103 HIMHGSYQ 110


>sp|Y934_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ0934|Methanocaldococcus jannaschii

Query: 5 MRGNYE 10
+RGNYE
Sbjct: 200 IRGNYE 205


>sp|HOSA_SACI7|HOMOCITRATE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 KHVMRGNYE 10
KH +R YE
Sbjct: 325 KHALRDKYE 333


>sp|HOSA_SACI6|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 KHVMRGNYE 10
KH +R YE
Sbjct: 325 KHALRDKYE 333


>sp|HOSA_SACI4|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 KHVMRGNYE 10
KH +R YE
Sbjct: 325 KHALRDKYE 333


>sp|HOSA_SACI3|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 KHVMRGNYE 10
KH +R YE
Sbjct: 325 KHALRDKYE 333


>sp|HOSA_SACI1|HOMOCITRATE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 KHVMRGNYE 10
KH +R YE
Sbjct: 325 KHALRDKYE 333


>sp|HOSA_SACI2|HOMOCITRATE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 KHVMRGNYE 10
KH +R YE
Sbjct: 325 KHALRDKYE 333


>sp|HOSA_SACS2|HOMOCITRATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KHVMRGNYE 10
KH +R YE
Sbjct: 325 KHALRDKYE 333


>sp|ARGB_METHJ|ACETYLGLUTAMATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 YKHVMRGN 8
Y H++ GN
Sbjct: 261 YAHIINGN 268


>sp|PRIS_METLZ|DNA primase small subunit PriS|Methanocorpusculum labreanum (strain

Query: 3 HVMRGNYE 10
H++RG Y+
Sbjct: 108 HIVRGPYD 115




26|Sequence|126|135|RGNYETLVSL

>sp|TRUD_METM5|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain C5

Query: 1 RGNYETLVS 9
RGNY T+V+
Sbjct: 374 RGNYATIVT 382


>sp|TRUD2_METMP|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain DSM

Query: 1 RGNYETLVS 9
RGNY T+V+
Sbjct: 374 RGNYATIVT 382


>sp|TRUD_METVS|PROBABLE tRNA pseudouridine synthase D|Methanococcus vannielii (strain ATCC

Query: 1 RGNYETLVS 9
RGNY T+V+
Sbjct: 374 RGNYATIVT 382


>sp|RL30_STAMF|LARGE ribosomal subunit protein uL30|Staphylothermus marinus (strain

Query: 3 NYETLVSL 10
NYETLV L
Sbjct: 62 NYETLVEL 69


>sp|ACDE1_METMA|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanosarcina mazei

Query: 1 RGNYETLVSL 10
+GNY+T++ L
Sbjct: 105 KGNYDTIIVL 114


>sp|ACDE1_METTE|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanosarcina

Query: 1 RGNYETLVSL 10
+GNY+T++ L
Sbjct: 105 KGNYDTIIIL 114


>sp|TRUD_META3|PROBABLE tRNA pseudouridine synthase D|Methanococcus aeolicus (strain ATCC

Query: 1 RGNYETLV 8
RGNY T+V
Sbjct: 387 RGNYATVV 394


>sp|HUTU_THEVO|PROBABLE urocanate hydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RGNYETLVSL 10
+G YETL +L
Sbjct: 143 QGTYETLSAL 152


>sp|HUTU_THEAC|PROBABLE urocanate hydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RGNYETLVSL 10
+G YETL +L
Sbjct: 143 QGTYETLSAL 152


>sp|ACDE2_METTE|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanosarcina

Query: 2 GNYETLVSL 10
GNY+T++ L
Sbjct: 106 GNYDTIILL 114


>sp|ACDE1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Archaeoglobus

Query: 2 GNYETLVSL 10
GNY+T++ L
Sbjct: 118 GNYDTVIFL 126


>sp|RS2_METTP|SMALL ribosomal subunit protein uS2|Methanothrix thermoacetophila

Query: 2 GNYETLVSL 10
G+YETL+ +
Sbjct: 11 GDYETLIPI 19


>sp|D89S1_PYRHO|DAMAGE-CONTROL phosphatase PH1575|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RGNYETL 7
+GN+ETL
Sbjct: 242 QGNFETL 248


>sp|TRUD1_METMP|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain DSM

Query: 1 RGNYETLVSL 10
+GNYE +V +
Sbjct: 160 KGNYEEVVKI 169


>sp|IXTPA_PICTO|DITP/XTP pyrophosphatase|Picrophilus torridus (strain ATCC 700027

Query: 1 RGNYETLVSL 10
R ++ET++SL
Sbjct: 99 RAHFETVISL 108


>sp|ACDE1_METAC|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanosarcina

Query: 2 GNYETLVSL 10
GNY+T++ L
Sbjct: 106 GNYDTVIVL 114


>sp|PYRB_CENSY|ASPARTATE carbamoyltransferase catalytic subunit|Cenarchaeum symbiosum

Query: 2 GNYETLVSL 10
GNY+ VSL
Sbjct: 178 GNYDVKVSL 186




27|Sequence|131|140|TLVSLDYAIS

>sp|RL3_ARCFU|LARGE ribosomal subunit protein uL3|Archaeoglobus fulgidus (strain ATCC

Query: 4 SLDYAIS 10
+LDYAIS
Sbjct: 168 ALDYAIS 174




28|Sequence|136|145|DYAISKPEVL

>sp|GCSPA_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 DYAISKPEVL 10
+Y +SKPE L
Sbjct: 76 NYILSKPEFL 85


>sp|NDK_SULAC|NUCLEOSIDE diphosphate kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DYAISKPE 8
DYA+SK E
Sbjct: 106 DYALSKSE 113


>sp|NDK_SACS2|NUCLEOSIDE diphosphate kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DYAISKPE 8
DYA+SK E
Sbjct: 106 DYALSKSE 113


>sp|NADM_METM5|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 DYAISKPEV 9
+YA+ KPE+
Sbjct: 110 NYAVKKPEL 118


>sp|FMDC_METBF|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanosarcina barkeri

Query: 1 DYAISK 6
DYAISK
Sbjct: 280 DYAISK 285


>sp|NDK_SULTO|NUCLEOSIDE diphosphate kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DYAISKPE 8
DYA+SK E
Sbjct: 106 DYALSKAE 113


>sp|Y1365_METJA|UNCHARACTERIZED protein MJ1365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YAISKPEVL 10
YA++ PE+L
Sbjct: 274 YALNNPELL 282


>sp|LIVM_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 2 YAISKPEVL 10
Y IS P++L
Sbjct: 148 YGISTPDIL 156


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 YAISKPEVL 10
Y +SKPE++
Sbjct: 810 YPVSKPELI 818


>sp|NDK_SACI7|NUCLEOSIDE diphosphate kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 DYAISKPE 8
DYA+SK E
Sbjct: 106 DYALSKSE 113


>sp|NDK_SACI6|NUCLEOSIDE diphosphate kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 DYAISKPE 8
DYA+SK E
Sbjct: 106 DYALSKSE 113


>sp|NDK_SACI4|NUCLEOSIDE diphosphate kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DYAISKPE 8
DYA+SK E
Sbjct: 106 DYALSKSE 113


>sp|NDK_SACI3|NUCLEOSIDE diphosphate kinase|Saccharolobus islandicus (strain M.16.27)

Query: 1 DYAISKPE 8
DYA+SK E
Sbjct: 106 DYALSKSE 113


>sp|NDK_SACI2|NUCLEOSIDE diphosphate kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 DYAISKPE 8
DYA+SK E
Sbjct: 106 DYALSKSE 113


>sp|NDK_SACI1|NUCLEOSIDE diphosphate kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 DYAISKPE 8
DYA+SK E
Sbjct: 106 DYALSKSE 113


>sp|GGGPS_STAMF|GERANYLGERANYLGLYCERYL phosphate synthase|Staphylothermus marinus (strain ATCC 43588

Query: 4 ISKPEVL 10
+SKPE+L
Sbjct: 150 VSKPEIL 156


>sp|RNP2_METAC|RIBONUCLEASE P protein component 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DYAISKPEV 9
DY + +PE+
Sbjct: 110 DYTVFEPEI 118


>sp|RL3_ARCFU|LARGE ribosomal subunit protein uL3|Archaeoglobus fulgidus (strain ATCC

Query: 1 DYAISK 6
DYAISK
Sbjct: 170 DYAISK 175


>sp|IF5A_METM6|TRANSLATION initiation factor 5A|Methanococcus maripaludis (strain C6 /

Query: 1 DYAISKP 7
DYA SKP
Sbjct: 29 DYAHSKP 35


>sp|CSG_METMA|MAJOR S-layer protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DYAISKPEV 9
DY SKP V
Sbjct: 377 DYEYSKPSV 385


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 2 YAISKPEVL 10
YAI KP V+
Sbjct: 763 YAIEKPYVI 771




29|Sequence|141|150|KPEVLSQIEQ

>sp|COFD_METLZ|2-PHOSPHO-L-LACTATE transferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 PEVLSQIEQ 10
PEV+S IE+
Sbjct: 179 PEVISAIEE 187


>sp|Y708_METS3|DNA-BINDING protein Msm_0708|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KPEVLSQIE 9
KPE+++QIE
Sbjct: 70 KPELVNQIE 78


>sp|MTM3_METJA|TYPE II methyltransferase M.MjaIII|Methanocaldococcus jannaschii

Query: 1 KPEVLSQIEQ 10
K ++LSQIE+
Sbjct: 13 KTQILSQIEE 22


>sp|Y1864_ARCFU|UNCHARACTERIZED protein AF_1864|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KPEVLSQIE 9
KPE+L +IE
Sbjct: 23 KPEILKEIE 31


>sp|FEN_METBU|FLAP endonuclease 1|Methanococcoides burtonii (strain DSM 6242

Query: 1 KPEVLSQIE 9
KPEVLS ++
Sbjct: 206 KPEVLSLVD 214


>sp|Y3180_HALMA|DNA-BINDING protein rrnAC3180|Haloarcula marismortui (strain ATCC 43049

Query: 1 KPEVLSQIEQ 10
KP+V QIEQ
Sbjct: 66 KPQVGEQIEQ 75




30|Sequence|146|155|SQIEQGKEPC

>sp|SPCS_METMP|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanococcus maripaludis (strain DSM 14266

Query: 2 QIEQGKEPC 10
+IE G PC
Sbjct: 206 EIELGNRPC 214


>sp|MTNA_ARCFU|PUTATIVE methylthioribose-1-phosphate isomerase|Archaeoglobus fulgidus

Query: 1 SQIEQGKE 8
S +EQGKE
Sbjct: 171 SAVEQGKE 178


>sp|RTCA_CALMQ|RNA 3'-terminal phosphate cyclase|Caldivirga maquilingensis (strain

Query: 4 EQGKEP 9
EQGK+P
Sbjct: 229 EQGKDP 234


>sp|PURL_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina barkeri (strain Fusaro /

Query: 2 QIEQGKEP 9
Q+E+GK P
Sbjct: 371 QVEEGKAP 378


>sp|APGM_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina barkeri (strain Fusaro /

Query: 2 QIEQGKEP 9
+IE+GK P
Sbjct: 203 RIEEGKNP 210


>sp|MTNA_METAC|PUTATIVE methylthioribose-1-phosphate isomerase|Methanosarcina acetivorans

Query: 1 SQIEQGKE 8
S IE+GKE
Sbjct: 183 SAIEEGKE 190


>sp|RTCA_THESM|RNA 3'-terminal phosphate cyclase|Thermococcus sibiricus (strain DSM

Query: 4 EQGKEP 9
EQGK+P
Sbjct: 230 EQGKDP 235


>sp|HEM1_META3|GLUTAMYL-TRNA reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 SQIEQGKEP 9
+ IE GK+P
Sbjct: 332 NMIENGKDP 340


>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 3 IEQGKE 8
IEQGKE
Sbjct: 567 IEQGKE 572


>sp|GGPP_METMA|GERANYLGERANYL diphosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SQIEQGKE 8
S IE+GKE
Sbjct: 291 SYIEEGKE 298


>sp|Y529_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0529|Methanocaldococcus

Query: 1 SQIEQGKEP 9
S +E+GK P
Sbjct: 65 SMLEKGKRP 73


>sp|RL10E_METJA|LARGE ribosomal subunit protein uL16|Methanocaldococcus jannaschii

Query: 3 IEQGKE 8
IEQGKE
Sbjct: 165 IEQGKE 170




31|Sequence|151|160|GKEPCNWRRP

>sp|NUCS_SULTO|ENDONUCLEASE NucS|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KEPCNWRRP 10
+EP NW+ P
Sbjct: 67 REPINWQPP 75


>sp|NUCS_SACS2|ENDONUCLEASE NucS|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KEPCNWRRP 10
+EP NW+ P
Sbjct: 67 REPLNWQPP 75


>sp|NUCS_SACI7|ENDONUCLEASE NucS|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 KEPCNWRRP 10
+EP NW+ P
Sbjct: 67 REPLNWQPP 75


>sp|NUCS_SACI4|ENDONUCLEASE NucS|Saccharolobus islandicus (strain M.14.25 /

Query: 2 KEPCNWRRP 10
+EP NW+ P
Sbjct: 67 REPLNWQPP 75


>sp|NUCS_SACI3|ENDONUCLEASE NucS|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 KEPCNWRRP 10
+EP NW+ P
Sbjct: 67 REPLNWQPP 75


>sp|NUCS_SACI2|ENDONUCLEASE NucS|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 KEPCNWRRP 10
+EP NW+ P
Sbjct: 67 REPLNWQPP 75


>sp|NUCS_SACI1|ENDONUCLEASE NucS|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 KEPCNWRRP 10
+EP NW+ P
Sbjct: 67 REPLNWQPP 75


>sp|NUCS_SULAC|ENDONUCLEASE NucS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KEPCNWRRP 10
+EP NW+ P
Sbjct: 66 REPVNWQPP 74


>sp|NUCS_PYRFU|ENDONUCLEASE NucS|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KEPCNWRRP 10
+EP NW+ P
Sbjct: 72 REPVNWQPP 80


>sp|RL32_HALSA|LARGE ribosomal subunit protein eL32|Halobacterium salinarum (strain ATCC

Query: 2 KEPCNWRRP 10
+ P +WRRP
Sbjct: 135 RTPTSWRRP 143


>sp|NUCS_PYRHO|ENDONUCLEASE NucS|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KEPCNWRRP 10
+EP NW+ P
Sbjct: 70 REPVNWQPP 78


>sp|NUCS_THEKO|ENDONUCLEASE NucS|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KEPCNWRRP 10
+EP NW+ P
Sbjct: 72 REPVNWQPP 80


>sp|NUCS_PYRAB|ENDONUCLEASE NucS|Pyrococcus abyssi (strain GE5 /

Query: 2 KEPCNWRRP 10
+EP NW+ P
Sbjct: 70 REPVNWQPP 78


>sp|CARA_ARCFU|CARBAMOYL phosphate synthase small chain|Archaeoglobus fulgidus (strain

Query: 2 KEPCNWR 8
K P NWR
Sbjct: 85 KNPSNWR 91


>sp|Y1880_METMJ|UNCHARACTERIZED solute-binding protein Memar_1880|Methanoculleus marisnigri (strain

Query: 3 EPCNWRRP 10
+PC +R P
Sbjct: 164 DPCGYRSP 171


>sp|RL32_METAC|LARGE ribosomal subunit protein eL32|Methanosarcina acetivorans (strain

Query: 6 NWRRP 10
NWRRP
Sbjct: 36 NWRRP 40


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GKEPCNW 7
GK P NW
Sbjct: 166 GKHPVNW 172


>sp|RL32_METMA|LARGE ribosomal subunit protein eL32|Methanosarcina mazei (strain ATCC

Query: 6 NWRRP 10
NWRRP
Sbjct: 36 NWRRP 40


>sp|Y280_STAMF|UNCHARACTERIZED solute-binding protein Smar_0280|Staphylothermus marinus (strain

Query: 2 KEPCNWR 8
K+PC +R
Sbjct: 157 KDPCGYR 163


>sp|Y1470_META3|UNCHARACTERIZED solute-binding protein Maeo_1470|Methanococcus aeolicus (strain

Query: 2 KEPCNWR 8
K+PC +R
Sbjct: 160 KDPCGYR 166


>sp|TRM1_HALLT|TRNA (guanine(26)-N(2))-dimethyltransferase|Halorubrum lacusprofundi

Query: 3 EPCNWRRP 10
E C WR P
Sbjct: 238 EDCLWRDP 245


>sp|Y530_METJA|UNCHARACTERIZED ZPR1-like protein MJ0530|Methanocaldococcus jannaschii (strain

Query: 3 EPCNWRR 9
E CN+RR
Sbjct: 41 EKCNFRR 47


>sp|Y2715_METAR|UPF0251 protein UNCMA_27150|Methanocella arvoryzae (strain DSM 22066

Query: 4 PCNWRRP 10
PCN +RP
Sbjct: 115 PCNEKRP 121


>sp|NUCS_METJA|ENDONUCLEASE NucS|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KEPCNWR 8
+EP NW+
Sbjct: 72 REPVNWQ 78


>sp|SYC_SULAC|CYSTEINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GKEPCNWR 8
GKE WR
Sbjct: 460 GKEKSTWR 467


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GKEPCNW 7
GKE NW
Sbjct: 185 GKEIANW 191




32|Sequence|156|165|NWRRPGPKIP

>sp|FAU1_CALMQ|PROBABLE ribonuclease FAU-1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 NWRRPGPKIP 10
N+ RPG K+P
Sbjct: 119 NYFRPGDKLP 128


>sp|FEN_IGNH4|FLAP endonuclease 1|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 WRRPGPK 8
WRRP P+
Sbjct: 298 WRRPDPQ 304


>sp|NUCS_SACI7|ENDONUCLEASE NucS|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 NWRRPGPKI 9
NW+ PG KI
Sbjct: 71 NWQPPGTKI 79


>sp|NUCS_SACI4|ENDONUCLEASE NucS|Saccharolobus islandicus (strain M.14.25 /

Query: 1 NWRRPGPKI 9
NW+ PG KI
Sbjct: 71 NWQPPGTKI 79


>sp|NUCS_SACI3|ENDONUCLEASE NucS|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 NWRRPGPKI 9
NW+ PG KI
Sbjct: 71 NWQPPGTKI 79


>sp|NUCS_SACI2|ENDONUCLEASE NucS|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 NWRRPGPKI 9
NW+ PG KI
Sbjct: 71 NWQPPGTKI 79


>sp|NUCS_SACI1|ENDONUCLEASE NucS|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 NWRRPGPKI 9
NW+ PG KI
Sbjct: 71 NWQPPGTKI 79


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain ATCC

Query: 4 RPGPKIP 10
RPG KIP
Sbjct: 252 RPGEKIP 258


>sp|NUCS_SACS2|ENDONUCLEASE NucS|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NWRRPGPKI 9
NW+ PG KI
Sbjct: 71 NWQPPGTKI 79


>sp|ILVD_METJA|DIHYDROXY-ACID dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WRRPGPKI 9
W++P PK+
Sbjct: 522 WKKPEPKV 529


>sp|NUCS_PYRHO|ENDONUCLEASE NucS|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NWRRPGPKI 9
NW+ PG K+
Sbjct: 74 NWQPPGSKV 82


>sp|ILVD_PICTO|DIHYDROXY-ACID dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 1 NWRRPGPK 8
+WR P PK
Sbjct: 522 SWRPPEPK 529


>sp|NUCS_PYRFU|ENDONUCLEASE NucS|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NWRRPGPKI 9
NW+ PG K+
Sbjct: 76 NWQPPGSKV 84


>sp|NEP_NATMA|HALOLYSIN-LIKE extracellular serine protease Nep|Natrialba magadii

Query: 3 RRPGPK 8
R PGPK
Sbjct: 37 REPGPK 42


>sp|NUCS_PYRAB|ENDONUCLEASE NucS|Pyrococcus abyssi (strain GE5 /

Query: 1 NWRRPGPKI 9
NW+ PG K+
Sbjct: 74 NWQPPGSKV 82


>sp|COPB_ARCFU|COPPER-EXPORTING P-type ATPase B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 RPGPKIP 10
+PG KIP
Sbjct: 218 KPGEKIP 224


>sp|NUCS_SULAC|ENDONUCLEASE NucS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NWRRPGPKI 9
NW+ PG +I
Sbjct: 70 NWQPPGSRI 78


>sp|LEUC_HALLT|3-ISOPROPYLMALATE dehydratase large subunit|Halorubrum lacusprofundi (strain ATCC

Query: 1 NWRRPG 6
+WR PG
Sbjct: 402 DWREPG 407


>sp|TRPG_METJA|ANTHRANILATE synthase component 2|Methanocaldococcus jannaschii (strain ATCC

Query: 5 PGPKIP 10
PGPK P
Sbjct: 54 PGPKTP 59


>sp|ILVD_METTP|DIHYDROXY-ACID dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 NWRRPGPKI 9
+WR P P++
Sbjct: 518 SWRPPEPRV 526


>sp|NUCS_SULTO|ENDONUCLEASE NucS|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NWRRPGPKI 9
NW+ PG I
Sbjct: 71 NWQPPGSVI 79


>sp|NUCS_THEKO|ENDONUCLEASE NucS|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 NWRRPGPKI 9
NW+ PG ++
Sbjct: 76 NWQPPGSRV 84


>sp|GGR_PYRAB|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus abyssi (strain GE5 /

Query: 2 WRRPGPKI 9
WR GP++
Sbjct: 321 WRTEGPRM 328


>sp|TIAS_IGNH4|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignicoccus hospitalis (strain

Query: 2 WRRPGPKIP 10
W+R PK P
Sbjct: 307 WKRKAPKCP 315


>sp|RL2_PYRNV|LARGE ribosomal subunit protein uL2|Pyrobaculum neutrophilum (strain

Query: 1 NWRRPGP 7
+WRR GP
Sbjct: 21 SWRREGP 27


>sp|Y2580_AERPE|UNCHARACTERIZED protein APE_2580|Aeropyrum pernix (strain ATCC 700893

Query: 3 RRPGP 7
RRPGP
Sbjct: 169 RRPGP 173


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 NWRRPGPK 8
NW P PK
Sbjct: 528 NWSPPPPK 535


>sp|RL2_SULAC|LARGE ribosomal subunit protein uL2|Sulfolobus acidocaldarius (strain

Query: 1 NWRRPGP 7
+WRR GP
Sbjct: 21 SWRRVGP 27


>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 NWRRPGPK 8
NW P PK
Sbjct: 528 NWTPPPPK 535


>sp|ILVD_PYRIL|DIHYDROXY-ACID dehydratase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 NWRRPGPK 8
NW P PK
Sbjct: 528 NWTPPPPK 535


>sp|SYP_AERPE|PROLINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 WRRPGPK 8
W RPG K
Sbjct: 334 WERPGAK 340




33|Sequence|161|170|GPKIPDVPVD

>sp|ENO_SACI7|ENOLASE islandicus (strain Y.G.57.14 /

Query: 1 GPKIPDVPV 9
GP++P +P+
Sbjct: 134 GPRLPKIPI 142


>sp|ENO_SACI6|ENOLASE islandicus (strain M.16.4 /

Query: 1 GPKIPDVPV 9
GP++P +P+
Sbjct: 134 GPRLPKIPI 142


>sp|ENO_SACI4|ENOLASE islandicus (strain M.14.25 /

Query: 1 GPKIPDVPV 9
GP++P +P+
Sbjct: 134 GPRLPKIPI 142


>sp|ENO_SACI3|ENOLASE islandicus (strain M.16.27) (Sulfolobus

Query: 1 GPKIPDVPV 9
GP++P +P+
Sbjct: 134 GPRLPKIPI 142


>sp|ENO_SACI2|ENOLASE islandicus (strain L.S.2.15 /

Query: 1 GPKIPDVPV 9
GP++P +P+
Sbjct: 134 GPRLPKIPI 142


>sp|ENO_SACI1|ENOLASE islandicus (strain Y.N.15.51 /

Query: 1 GPKIPDVPV 9
GP++P +P+
Sbjct: 134 GPRLPKIPI 142


>sp|ENO_SACS2|ENOLASE solfataricus (strain ATCC 35092

Query: 1 GPKIPDVPV 9
GP++P +P+
Sbjct: 134 GPRLPKIPI 142


>sp|MCH_HALMA|MESACONYL-COA hydratase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GPKIPDVPV 9
GP +PD P+
Sbjct: 193 GPMLPDTPI 201


>sp|RNJ_PYRAB|RIBONUCLEASE J|Pyrococcus abyssi (strain GE5 /

Query: 1 GPKIPDVPV 9
P PDVP+
Sbjct: 97 APHYPDVPI 105


>sp|TRPD_METM5|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 GPKIPDVPVD 10
G KIP+ P D
Sbjct: 119 GCKIPETPED 128


>sp|TRPA_METAC|TRYPTOPHAN synthase alpha chain|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GPKIPDVPVD 10
G IPD+PV+
Sbjct: 133 GLIIPDIPVE 142


>sp|TRPA_METMA|TRYPTOPHAN synthase alpha chain|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GPKIPDVPVD 10
G IPD+PV+
Sbjct: 132 GLIIPDIPVE 141


>sp|TRPD_METM7|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 GPKIPDVPVD 10
G KIP+ P D
Sbjct: 119 GCKIPETPED 128


>sp|CCA_METTH|CCA-ADDING enzyme|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 IPDVPVD 10
+PDVP D
Sbjct: 295 VPDVPSD 301


>sp|Y906_METJA|UNCHARACTERIZED protein MJ0906|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PKIPDVPV 9
PKI D+P+
Sbjct: 85 PKIDDIPL 92


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 4 IPDVPV 9
IPD+PV
Sbjct: 161 IPDIPV 166


>sp|COOS_METJA|CARBON monoxide dehydrogenase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GPKIPDVPV 9
G IPD+PV
Sbjct: 534 GVDIPDLPV 542


>sp|TRPA_METBF|TRYPTOPHAN synthase alpha chain|Methanosarcina barkeri (strain Fusaro /

Query: 4 IPDVPVD 10
+PD+PV+
Sbjct: 127 VPDIPVE 133


>sp|COOS2_METMA|CARBON monoxide dehydrogenase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GPKIPDVPV 9
G +PD+PV
Sbjct: 544 GVPVPDLPV 552


>sp|COOS2_METAC|CARBON monoxide dehydrogenase 2|Methanosarcina acetivorans (strain ATCC

Query: 1 GPKIPDVPV 9
G IPD+P+
Sbjct: 543 GVPIPDLPI 551


>sp|PCNA_METST|DNA polymerase sliding clamp|Methanosphaera stadtmanae (strain ATCC

Query: 2 PKIPDVPVD 10
P PD+P D
Sbjct: 121 PSQPDIPYD 129


>sp|EF1A_METLZ|ELONGATION factor 1-alpha|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 KIPDVPVD 10
K+PD+P D
Sbjct: 215 KMPDMPTD 222


>sp|TRPA_HALSA|TRYPTOPHAN synthase alpha chain|Halobacterium salinarum (strain ATCC 700922

Query: 1 GPKIPDVPVD 10
G +PD+PVD
Sbjct: 123 GFVVPDLPVD 132


>sp|TRPA_HALS3|TRYPTOPHAN synthase alpha chain|Halobacterium salinarum (strain ATCC 29341

Query: 1 GPKIPDVPVD 10
G +PD+PVD
Sbjct: 123 GFVVPDLPVD 132


>sp|TRMY_HALSA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Halobacterium

Query: 1 GPKIPDVPVD 10
P PD P+D
Sbjct: 11 APTTPDFPLD 20


>sp|TRMY_HALS3|TRNA (pseudouridine(54)-N(1))-methyltransferase|Halobacterium

Query: 1 GPKIPDVPVD 10
P PD P+D
Sbjct: 11 APTTPDFPLD 20


>sp|MPTA_METTH|GTP cyclohydrolase MptA|Methanothermobacter thermautotrophicus

Query: 3 KIPDVPV 9
KIP +PV
Sbjct: 12 KIPSIPV 18




34|Sequence|166|175|DVPVDPSPGS

>sp|THIOL_METTH|ACETYL-COA acetyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 DVPVDPSPG 9
D+PV+PS G
Sbjct: 318 DIPVNPSGG 326


>sp|DNLI_METS5|DNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 VPVDPSPG 9
VPVDP G
Sbjct: 313 VPVDPESG 320


>sp|Y1374_METJA|UNCHARACTERIZED protein MJ1374|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VDPSPGS 10
VDP PG+
Sbjct: 38 VDPGPGA 44


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DVPVDPS 7
D+P+DP+
Sbjct: 425 DLPIDPT 431


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DVPVDPSPGS 10
D+P+DP+ S
Sbjct: 426 DLPIDPTKES 435


>sp|Y245_SULTO|UPF0210 protein STK_02450|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VPVDPSPGS 10
+P+D PGS
Sbjct: 396 IPIDSPPGS 404


>sp|PUR7_THEAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DVPVDPSPGS 10
DVP SPGS
Sbjct: 80 DVPEKVSPGS 89


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 VPVDPSP 8
VPV+P P
Sbjct: 74 VPVEPRP 80


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DVPVDP 6
D+P+DP
Sbjct: 468 DLPIDP 473


>sp|COFG_METTP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 PVDPSPGS 10
P+DP PG+
Sbjct: 205 PLDPKPGT 212


>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DVPVDPSP 8
D P++P+P
Sbjct: 536 DYPINPTP 543


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DVPVDP 6
D+PVDP
Sbjct: 425 DLPVDP 430


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DVPVDP 6
D+PVDP
Sbjct: 425 DLPVDP 430


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 VPVDPSPG 9
+PVDP G
Sbjct: 313 IPVDPETG 320


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 DVPVDP 6
D+PVDP
Sbjct: 425 DLPVDP 430


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DVPVDP 6
D+PVDP
Sbjct: 420 DLPVDP 425


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DVPVDP 6
D+PVDP
Sbjct: 425 DLPVDP 430


>sp|NDK_METAC|NUCLEOSIDE diphosphate kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PVDPSPGS 10
PVD +PG+
Sbjct: 93 PVDAAPGT 100


>sp|NDK_METMA|NUCLEOSIDE diphosphate kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PVDPSPGS 10
PVD +PG+
Sbjct: 93 PVDAAPGT 100


>sp|RFCL_METMJ|REPLICATION factor C large subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 DPSPG 9
DPSPG
Sbjct: 445 DPSPG 449


>sp|NDK_METBF|NUCLEOSIDE diphosphate kinase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PVDPSPGS 10
PVD +PG+
Sbjct: 93 PVDAAPGT 100


>sp|SYDND_METST|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DVPVDPSP 8
D+P +P P
Sbjct: 280 DIPTEPFP 287


>sp|FOLCP_HALVD|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 1 DVPVDPS 7
D PVDPS
Sbjct: 696 DAPVDPS 702


>sp|TRMY_HALMA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Haloarcula marismortui

Query: 2 VPVDPSPG 9
+PV+ SPG
Sbjct: 97 IPVETSPG 104


>sp|GATE_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 3 PVDPSPGS 10
PVDP P +
Sbjct: 435 PVDPDPSA 442


>sp|GATE_HALS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 3 PVDPSPGS 10
PVDP P +
Sbjct: 435 PVDPDPSA 442




35|Sequence|171|180|PSPGSGPPVP

>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PSPGSGPPVP 10
P+PG PP+P
Sbjct: 517 PNPGDVPPLP 526


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 2 SPGSGPP 8
+P SGPP
Sbjct: 564 TPASGPP 570


>sp|PYRH_THEAC|URIDYLATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PGSGPPVP 10
PGS P +P
Sbjct: 86 PGSNPTIP 93


>sp|SPEB_METJA|AGMATINASE jannaschii (strain ATCC 43067

Query: 2 SPGSGPPVP 10
+PG+G P P
Sbjct: 220 APGTGTPEP 228


>sp|Y1342_METJA|UNCHARACTERIZED protein MJ1342|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PGSGPPVP 10
PGS P+P
Sbjct: 69 PGSACPIP 76


>sp|GATD_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina barkeri (strain Fusaro /

Query: 2 SPGSGPPV 9
+PGSGP +
Sbjct: 304 TPGSGPEI 311


>sp|FTTA_METMP|TRANSCRIPTION termination factor FttA|Methanococcus maripaludis (strain DSM 14266

Query: 1 PSPGSGPPVP 10
P P PP+P
Sbjct: 130 PKPVRTPPIP 139


>sp|YHMF_METFE|UNCHARACTERIZED 32.2 kDa protein in|Methanothermus fervidus

Query: 2 SPGSGPPVP 10
+PG G P P
Sbjct: 223 APGVGNPTP 231


>sp|TMCA_AERPE|TRNA(MET) cytidine acetyltransferase TmcA|Aeropyrum pernix (strain ATCC

Query: 1 PSPGSGPP 8
PSPGSG P
Sbjct: 173 PSPGSGVP 180


>sp|DAPAL_HALSA|UNCHARACTERIZED DapA-like lyase VNG_0444G|Halobacterium salinarum (strain ATCC

Query: 1 PSPGSGPPV 9
P+PGSG P+
Sbjct: 6 PAPGSGDPL 14


>sp|DAPAL_HALS3|UNCHARACTERIZED DapA-like lyase OE_1665R|Halobacterium salinarum (strain ATCC

Query: 1 PSPGSGPPV 9
P+PGSG P+
Sbjct: 6 PAPGSGDPL 14


>sp|KPTA_AERPE|PROBABLE RNA 2'-phosphotransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PSPGSGPPV 9
P PG PP+
Sbjct: 119 PLPGEPPPI 127


>sp|TRM1_METKA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanopyrus kandleri

Query: 6 GPPVP 10
GPPVP
Sbjct: 131 GPPVP 135


>sp|HEM3_NITMS|PROBABLE porphobilinogen deaminase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 PSPGSG 6
PSPG G
Sbjct: 189 PSPGQG 194


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 1 PSPGSGPPVP 10
P P + PVP
Sbjct: 543 PGPDASAPVP 552




36|Sequence|176|185|GPPVPAPDLL

>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 PPVPAP 7
PP PAP
Sbjct: 33 PPYPAP 38


>sp|TRUA_PYRHO|TRNA pseudouridine synthase A|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PPVPAPDLL 10
PP PA LL
Sbjct: 209 PPAPAEGLL 217


>sp|UPPS_METJA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanocaldococcus

Query: 3 PVPAPDLL 10
P P PDL+
Sbjct: 220 PFPNPDLI 227


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PPVPAPDLL 10
PP+P P L+
Sbjct: 523 PPLPLPGLM 531


>sp|RS3_STAMF|SMALL ribosomal subunit protein uS3|Staphylothermus marinus (strain

Query: 3 PVPAPDL 9
PVP PDL
Sbjct: 87 PVPDPDL 93


>sp|UPPS_METMA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanosarcina mazei

Query: 1 GPPVPAPDLL 10
G PVP DL+
Sbjct: 197 GVPVPNVDLI 206


>sp|KATG_METAC|CATALASE-PEROXIDASE acetivorans (strain ATCC 35395

Query: 1 GPPVPAPDLL 10
GP VPA +L+
Sbjct: 424 GPEVPAEELI 433


>sp|LEUC_HALVD|3-ISOPROPYLMALATE dehydratase large subunit|Haloferax volcanii (strain ATCC 29605

Query: 3 PVPAPDLL 10
P+PAP+ L
Sbjct: 305 PIPAPEDL 312


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GPPVPAPDLL 10
G VP PD L
Sbjct: 1959 GVSVPVPDAL 1968


>sp|HIS1_ARCFU|ATP phosphoribosyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PPVPAPDLL 10
PP+P DL+
Sbjct: 113 PPMPEADLI 121


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GPPVPAPDLL 10
G PVP +L+
Sbjct: 444 GEPVPTDELI 453


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GPPVPAPDLL 10
G PVP +L+
Sbjct: 444 GEPVPTDELI 453


>sp|SPSS1_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocella arvoryzae (strain DSM 22066

Query: 2 PPVPAPD 8
P PAPD
Sbjct: 131 PKTPAPD 137




37|Sequence|181|190|APDLLMQIKQ

>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PDLLMQIKQ 10
PD L +IKQ
Sbjct: 46 PDYLEEIKQ 54




38|Sequence|186|195|MQIKQEGELQ

>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 MQIKQEGELQ 10
+++K+EGE++
Sbjct: 593 LKVKKEGEIE 602


>sp|ARLY_SULAC|ARGININOSUCCINATE lyase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 MQIKQEGELQ 10
+QIK GE+Q
Sbjct: 338 IQIKNFGEIQ 347




39|Sequence|191|200|EGELQLQEQQ

>sp|SDO1_AERPE|RIBOSOME maturation protein SDO1 homolog|Aeropyrum pernix (strain ATCC

Query: 1 EGELQLQEQQ 10
EGE+QL E+Q
Sbjct: 82 EGEIQLTEEQ 91




40|Sequence|196|205|LQEQQALGVE

>sp|GGR_HALVD|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Haloferax volcanii (strain ATCC 29605

Query: 2 QEQQALGVE 10
+E+QA+G+E
Sbjct: 165 REKQAIGIE 173


>sp|Y1865_ARCFU|UNCHARACTERIZED protein AF_1865|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LQEQQALGVE 10
LQ QALG+E
Sbjct: 26 LQIAQALGIE 35




41|Sequence|201|210|ALGVEAWAAG

>sp|RL22_METS3|LARGE ribosomal subunit protein uL22|Methanobrevibacter smithii (strain

Query: 3 GVEAWAAG 10
G E WAAG
Sbjct: 74 GQEGWAAG 81


>sp|SYS_NITMS|SERINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 VEAWAAG 10
+EAW AG
Sbjct: 335 IEAWMAG 341


>sp|CFBE_METAC|COENZYME F(430) synthetase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GVEAWAAG 10
G+EAW AG
Sbjct: 147 GLEAWKAG 154


>sp|SYS_THEON|SERINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 4 VEAWAAG 10
+EAW AG
Sbjct: 358 IEAWMAG 364


>sp|SYS_THEKO|SERINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 VEAWAAG 10
+EAW AG
Sbjct: 358 IEAWMAG 364


>sp|SYS_THEGJ|SERINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 4 VEAWAAG 10
+EAW AG
Sbjct: 358 IEAWMAG 364


>sp|FEN_STAMF|FLAP endonuclease 1|Staphylothermus marinus (strain ATCC 43588

Query: 2 LGVEAW 7
LG+EAW
Sbjct: 343 LGLEAW 348


>sp|ACDG2_METMA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina mazei

Query: 1 ALGVEAWAAG 10
+GVEA AAG
Sbjct: 390 GIGVEAAAAG 399


>sp|AROC_PYRIL|CHORISMATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 GVEAWAAG 10
GVE WA G
Sbjct: 208 GVEVWAVG 215


>sp|ACDG1_METMA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina mazei

Query: 1 ALGVEAWAAG 10
+GVEA AAG
Sbjct: 390 GIGVEAAAAG 399


>sp|CFBE_METBF|COENZYME F(430) synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 3 GVEAWAAG 10
G+E W AG
Sbjct: 147 GLECWKAG 154


>sp|AROC_PYRNV|CHORISMATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 GVEAWAAG 10
GVE WA G
Sbjct: 208 GVEVWAVG 215


>sp|ACDG2_METTE|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 1 ALGVEAWAAG 10
+GVEA AAG
Sbjct: 389 GIGVEAAAAG 398


>sp|RL22_ARCFU|LARGE ribosomal subunit protein uL22|Archaeoglobus fulgidus (strain

Query: 3 GVEAWAAG 10
G+E W AG
Sbjct: 76 GLEKWYAG 83


>sp|AROC_PYRAR|CHORISMATE synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 GVEAWAAG 10
GVE WA G
Sbjct: 208 GVEIWAVG 215


>sp|AROC_PYRAE|CHORISMATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GVEAWAAG 10
GVE WA G
Sbjct: 208 GVEIWAVG 215


>sp|AROC_PYRCJ|CHORISMATE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 GVEAWAAG 10
GVE WA G
Sbjct: 208 GVEVWALG 215


>sp|RNP2_HALSA|RIBONUCLEASE P protein component 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 ALGVEAW 7
A+G+EAW
Sbjct: 16 AVGIEAW 22


>sp|RNP2_HALS3|RIBONUCLEASE P protein component 2|Halobacterium salinarum (strain ATCC 29341

Query: 1 ALGVEAW 7
A+G+EAW
Sbjct: 16 AVGIEAW 22


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ALGVEAWAA 9
A+G E WAA
Sbjct: 197 AVGSEDWAA 205


>sp|Y405_HALVD|PROBABLE cell surface fusion protein|Haloferax volcanii (strain ATCC 29605

Query: 2 LGVEAWA 8
+GVE+WA
Sbjct: 279 VGVESWA 285




42|Sequence|206|215|AWAAGQPDIG

>sp|DPCKG_STAMF|GTP-DEPENDENT dephospho-CoA kinase|Staphylothermus marinus (strain ATCC 43588

Query: 3 AAGQPDIG 10
A GQPDIG
Sbjct: 125 AYGQPDIG 132


>sp|GATD_METST|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosphaera stadtmanae (strain ATCC

Query: 2 WAAGQPD 8
WAAGQ D
Sbjct: 403 WAAGQTD 409


>sp|DPCKG_DESA1|GTP-DEPENDENT dephospho-CoA kinase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 5 GQPDIG 10
GQPD+G
Sbjct: 125 GQPDVG 130


>sp|AAT_THEKO|ASPARTATE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 AGQPDI 9
AGQPDI
Sbjct: 22 AGQPDI 27


>sp|RFCL_METTH|REPLICATION factor C large subunit|Methanothermobacter thermautotrophicus

Query: 1 AWAAGQP 7
AW AG+P
Sbjct: 31 AWKAGKP 37


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WAAGQPDI 9
W+ GQP I
Sbjct: 856 WSVGQPVI 863


>sp|ATGT_NANEQ|TRNA-GUANINE(15) transglycosylase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 AWAAGQPDIG 10
AW GQ +IG
Sbjct: 388 AWPFGQFEIG 397


>sp|AROE_ARCFU|SHIKIMATE dehydrogenase (NADP(+))|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WAAGQPDIG 10
W +PD+G
Sbjct: 249 WTGIEPDVG 257


>sp|RFCL_METTP|REPLICATION factor C large subunit|Methanothrix thermoacetophila (strain DSM

Query: 1 AWAAGQPDI 9
AW G+P++
Sbjct: 32 AWEKGRPEV 40


>sp|WTPB_PYRAB|MOLYBDATE/TUNGSTATE transport system permease protein|Pyrococcus abyssi (strain GE5 /

Query: 1 AWAAGQPDIG 10
AWA G ++G
Sbjct: 184 AWARGISEVG 193


>sp|CYAS_METPS|CYSTEATE synthase|Methanocella paludicola (strain DSM 17711

Query: 1 AWAAGQPDI 9
AW AG+ DI
Sbjct: 276 AWKAGRRDI 284


>sp|G6PI_NATPD|PROBABLE glucose-6-phosphate isomerase|Natronomonas pharaonis (strain ATCC

Query: 3 AAGQPDI 9
AAGQP++
Sbjct: 351 AAGQPNV 357




43|Sequence|211|220|QPDIGEEPWG

>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 IGEEPW 9
IG EPW
Sbjct: 78 IGNEPW 83


>sp|TRPE_AERPE|ANTHRANILATE synthase component 1|Aeropyrum pernix (strain ATCC 700893

Query: 4 IGEEPW 9
+GEEPW
Sbjct: 104 VGEEPW 109


>sp|LONH_METTH|PUTATIVE lon protease homolog|Methanothermobacter thermautotrophicus (strain

Query: 1 QPDIGEEPW 9
PD+G +P+
Sbjct: 261 HPDLGSQPY 269


>sp|GLCDH_METPS|GLUCOSE 1-dehydrogenase|Methanocella paludicola (strain DSM 17711

Query: 3 DIGEEP 8
D+GEEP
Sbjct: 226 DVGEEP 231


>sp|Y1514_ARCFU|UNCHARACTERIZED protein AF_1514|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 GEEPW 9
GE+PW
Sbjct: 55 GEKPW 59


>sp|FLAK_HALMA|PREFLAGELLIN peptidase|Haloarcula marismortui (strain ATCC 43049

Query: 1 QPDIGEEPWG 10
PD ++PWG
Sbjct: 263 HPDQIDDPWG 272


>sp|RIO2_ARCFU|RIO-TYPE serine/threonine-protein kinase Rio2|Archaeoglobus fulgidus (strain

Query: 3 DIGEEPW 9
++GEE W
Sbjct: 241 EVGEEGW 247


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 5 GEEPW 9
GE+PW
Sbjct: 244 GEKPW 248




44|Sequence|216|225|EEPWGLSQLD

>sp|HIS8_METVS|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EEPWGLS 7
E PWG S
Sbjct: 44 ENPWGCS 50


>sp|HIS8_METM5|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C5 /

Query: 1 EEPWGLS 7
E PWG S
Sbjct: 44 ENPWGCS 50


>sp|HIS8_METM6|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C6 /

Query: 1 EEPWGLS 7
E PWG S
Sbjct: 44 ENPWGCS 50


>sp|HIS8_METM7|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C7 /

Query: 1 EEPWGLS 7
E PWG S
Sbjct: 44 ENPWGCS 50


>sp|HIS8_METMP|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EEPWGLS 7
E PWG S
Sbjct: 44 ENPWGCS 50


>sp|HIS8_META3|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EEPWGLS 7
E PWG S
Sbjct: 44 ENPWGSS 50


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EEPWGLSQLD 10
+EPW L++ D
Sbjct: 453 KEPWKLAKTD 462


>sp|HIS8_METJA|HISTIDINOL-PHOSPHATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EEPWGLS 7
E PWG S
Sbjct: 47 ENPWGPS 53


>sp|CAS1B_SACS2|CRISPR-ASSOCIATED endonuclease Cas1 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EEPWGL 6
E PWG+
Sbjct: 72 ETPWGI 77


>sp|HIS8_METST|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 EEPWGLS 7
E PWG S
Sbjct: 41 ENPWGPS 47


>sp|SYM_THEVO|METHIONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 EPWGLSQLD 10
EPW L + D
Sbjct: 460 EPWNLIKTD 468


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 EPWGLSQLD 10
EPW LS D
Sbjct: 504 EPWKLSNDD 512




45|Sequence|221|230|LSQLDSGAGD

***** No hits found ******


46|Sequence|226|235|SGAGDISTDA

>sp|THSB_HALSA|THERMOSOME subunit beta|Halobacterium salinarum (strain ATCC 700922

Query: 3 AGDISTD 9
AGD+STD
Sbjct: 527 AGDLSTD 533


>sp|THIM_METAR|HYDROXYETHYLTHIAZOLE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 SGAGDISTD 9
SGA DI TD
Sbjct: 167 SGATDIVTD 175


>sp|THIM_METPE|HYDROXYETHYLTHIAZOLE kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 SGAGDISTD 9
SGA DI TD
Sbjct: 166 SGATDIVTD 174




47|Sequence|231|240|ISTDATSGVH

>sp|RIBL_PICTO|FAD synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 ISTDATSGVH 10
I+TD T+G H
Sbjct: 34 IATDKTAGSH 43


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 1 ISTDATSG 8
I+TD TSG
Sbjct: 967 IATDGTSG 974


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 5 ATSGVH 10
ATSG+H
Sbjct: 367 ATSGIH 372




48|Sequence|236|245|TSGVHSNFST

>sp|Y534_METFV|UNCHARACTERIZED protein Mfer_0534|Methanothermus fervidus (strain ATCC 43054

Query: 1 TSGVHSNF 8
TSGVHS++
Sbjct: 325 TSGVHSHW 332


>sp|PUR5_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 TSGVHSN 7
+SG+HSN
Sbjct: 181 SSGIHSN 187


>sp|PUR5_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 TSGVHSN 7
+SG+HSN
Sbjct: 181 SSGIHSN 187


>sp|PUR5_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TSGVHSN 7
+SG+HSN
Sbjct: 180 SSGIHSN 186


>sp|PUR5_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TSGVHSN 7
+SG+HSN
Sbjct: 180 SSGIHSN 186


>sp|PUR5_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 TSGVHSN 7
+SG+HSN
Sbjct: 180 SSGIHSN 186


>sp|PUR5_METVS|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 TSGVHSN 7
+SG+HSN
Sbjct: 177 SSGIHSN 183


>sp|PUR5_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 TSGVHSN 7
+SG+HSN
Sbjct: 176 SSGIHSN 182


>sp|PUR5_METMP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 TSGVHSN 7
+SG+HSN
Sbjct: 177 SSGIHSN 183


>sp|PUR5_METM7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C7 /

Query: 1 TSGVHSN 7
+SG+HSN
Sbjct: 177 SSGIHSN 183


>sp|PUR5_METM6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C6 /

Query: 1 TSGVHSN 7
+SG+HSN
Sbjct: 177 SSGIHSN 183


>sp|PUR5_METM5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C5 /

Query: 1 TSGVHSN 7
+SG+HSN
Sbjct: 177 SSGIHSN 183


>sp|PUR5_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 TSGVHSN 7
+SG+HSN
Sbjct: 186 SSGIHSN 192


>sp|PUR5_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TSGVHSN 7
+SG+HSN
Sbjct: 176 SSGIHSN 182


>sp|PUR5_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TSGVHSN 7
+SG+HSN
Sbjct: 178 SSGIHSN 184


>sp|ORNAT_PYRHO|ORNITHINE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SGVHSN 7
SGVHSN
Sbjct: 315 SGVHSN 320


>sp|GLNA_SULAC|GLUTAMINE synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 SGVHSNFS 9
SG+H++FS
Sbjct: 266 SGMHTHFS 273


>sp|PUR5_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TSGVHSN 7
++GVHSN
Sbjct: 181 STGVHSN 187


>sp|PUR5_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 TSGVHSN 7
++GVHSN
Sbjct: 181 STGVHSN 187


>sp|PUR5_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TSGVHSN 7
++GVHSN
Sbjct: 181 STGVHSN 187


>sp|PUR5_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TSGVHSN 7
++GVHSN
Sbjct: 170 SNGVHSN 176


>sp|GLNA1_METMA|GLUTAMINE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SGVHSNFS 9
SG+HSN S
Sbjct: 245 SGMHSNQS 252


>sp|PUR5_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 TSGVHSN-FST 10
+SG+HSN F+T
Sbjct: 176 SSGLHSNGFTT 186


>sp|PUR5_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TSGVHSN-FST 10
+SG+HSN F+T
Sbjct: 176 SSGLHSNGFTT 186


>sp|PUR5_METBU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 TSGVHSN 7
++GVHSN
Sbjct: 181 SNGVHSN 187




49|Sequence|241|250|SNFSTTIPPT

>sp|CFBE_METJA|COENZYME F(430) synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SNFSTTIPPT 10
SNF + PPT
Sbjct: 138 SNFGSIAPPT 147


>sp|Y512_METJA|UNCHARACTERIZED protein MJ0512|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SNFSTTIP 8
+NF TTIP
Sbjct: 50 ANFITTIP 57


>sp|PURL_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 FSTTIPPT 10
F T IPPT
Sbjct: 523 FKTAIPPT 530


>sp|BIOF_METJA|PUTATIVE 8-amino-7-oxononanoate synthase|Methanocaldococcus jannaschii

Query: 3 FSTTIPP 9
FST +PP
Sbjct: 254 FSTALPP 260


>sp|SYFB_METB6|PHENYLALANINE--TRNA ligase beta subunit|Methanoregula boonei (strain DSM 21154

Query: 2 NFSTTIPPT 10
NF+ +PPT
Sbjct: 339 NFAVEVPPT 347


>sp|BIOF_META3|PUTATIVE 8-amino-7-oxononanoate synthase|Methanococcus aeolicus (strain ATCC

Query: 3 FSTTIPPT 10
+ST++PP+
Sbjct: 259 YSTSLPPS 266


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 NFSTTIP 8
NFS T+P
Sbjct: 939 NFSETVP 945


>sp|FBP_PYRFU|FRUCTOSE-1,6-BISPHOSPHATASE furiosus (strain ATCC 43587

Query: 1 SNFSTTIPP 9
S+F TTI P
Sbjct: 15 SDFETTIMP 23




50|Sequence|246|255|TIPPTSWQTD

>sp|CDC6_METLZ|ORC1-TYPE DNA replication protein|Methanocorpusculum labreanum (strain ATCC

Query: 1 TIPPTSWQTD 10
TIP T W TD
Sbjct: 132 TIPATGWHTD 141


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 TIPPTSWQTD 10
TI P+SW T+
Sbjct: 441 TILPSSWCTE 450


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 TIPPTSWQTD 10
TI P+SW T+
Sbjct: 441 TILPSSWCTE 450


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 3 PPTSWQ 8
PPT WQ
Sbjct: 332 PPTYWQ 337


>sp|ARGX_SULTO|GLUTAMATE--LYSW ligase ArgX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IPPTSWQTD 10
IPP W+ +
Sbjct: 194 IPPNEWRAN 202


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 1 TIPPTSWQTD 10
T+ P+SW T+
Sbjct: 441 TVLPSSWCTE 450


>sp|RFCL_METMJ|REPLICATION factor C large subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 IPPTSWQ 8
+PP+ WQ
Sbjct: 323 MPPSRWQ 329


>sp|RS19_PYRIL|SMALL ribosomal subunit protein uS19|Pyrobaculum islandicum (strain DSM

Query: 2 IPPTSWQT 9
IPP W T
Sbjct: 23 IPPEEWST 30


>sp|FSX1_HALS0|FUSEXIN 1|Haloferax sp. (strain Q22)

Query: 1 TIPPTSWQTD 10
TIP WQ D
Sbjct: 535 TIPGLGWQLD 544


>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 3 PPTSWQ 8
PPT+W+
Sbjct: 295 PPTAWR 300


>sp|RS19_PYRAE|SMALL ribosomal subunit protein uS19|Pyrobaculum aerophilum (strain

Query: 2 IPPTSWQT 9
IPP W T
Sbjct: 21 IPPEEWAT 28


>sp|RS19_PYRAR|SMALL ribosomal subunit protein uS19|Pyrobaculum arsenaticum (strain

Query: 2 IPPTSWQT 9
IPP W T
Sbjct: 22 IPPEEWAT 29


>sp|TOP6B_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 3 PPTSWQ 8
PP+ WQ
Sbjct: 515 PPSKWQ 520


>sp|HIS1_SACS2|ATP phosphoribosyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 2 IPPTSWQ 8
I PTSW+
Sbjct: 39 IVPTSWE 45


>sp|TRUA_METMA|TRNA pseudouridine synthase A|Methanosarcina mazei (strain ATCC

Query: 2 IPPTSW 7
+PPT W
Sbjct: 84 LPPTIW 89


>sp|RFCL_METB6|REPLICATION factor C large subunit|Methanoregula boonei (strain DSM 21154

Query: 2 IPPTSWQ 8
+PP WQ
Sbjct: 323 LPPERWQ 329


>sp|RS19_PYRNV|SMALL ribosomal subunit protein uS19|Pyrobaculum neutrophilum (strain

Query: 2 IPPTSWQT 9
IPP W T
Sbjct: 21 IPPEEWGT 28


>sp|Y992_IGNH4|MEMO1 family protein Igni_0992|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 IPPTSWQT 9
+PP+ W+T
Sbjct: 98 MPPSIWET 105




51|Sequence|251|260|SWQTDLPPHH

>sp|Y462_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 5 DLPPHH 10
D PPHH
Sbjct: 134 DRPPHH 139


>sp|Y394_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 5 DLPPHH 10
D PPHH
Sbjct: 137 DKPPHH 142


>sp|Y3551_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 5 DLPPHH 10
D PPHH
Sbjct: 134 DKPPHH 139


>sp|Y583_METTM|PUTATIVE ABC transporter ATP-binding protein|Methanothermobacter

Query: 5 DLPPHH 10
D PPHH
Sbjct: 134 DRPPHH 139


>sp|FEN_THEPD|FLAP endonuclease 1|Thermofilum pendens (strain DSM 2475

Query: 2 WQTDLPP 8
W +D+PP
Sbjct: 271 WSSDVPP 277


>sp|ILVC_PYRNV|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum neutrophilum (strain DSM

Query: 2 WQTDLPPH 9
WQ+ + PH
Sbjct: 90 WQSQIAPH 97


>sp|ACKA_METMZ|ACETATE kinase|Methanosarcina mazei (Methanosarcina frisia)

Query: 3 QTDLPPH 9
QTDLP H
Sbjct: 54 QTDLPNH 60


>sp|ACKA_METMA|ACETATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 QTDLPPH 9
QTDLP H
Sbjct: 54 QTDLPNH 60


>sp|ACKA_METAC|ACETATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 QTDLPPH 9
QTDLP H
Sbjct: 54 QTDLPNH 60


>sp|AGOG_NANEQ|N-GLYCOSYLASE/DNA lyase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 SWQTDLPPHH 10
S QT++PP H
Sbjct: 179 SKQTNIPPLH 188


>sp|PYRC_SULTO|DIHYDROOROTASE tokodaii (strain DSM 16993

Query: 2 WQTDLPPHH 10
+ TD+ PHH
Sbjct: 207 FSTDITPHH 215


>sp|MTIP_METKA|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanopyrus kandleri

Query: 5 DLPPH 9
DLPPH
Sbjct: 53 DLPPH 57


>sp|SYR_HALMA|ARGININE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 SWQTDLP 7
+WQ DLP
Sbjct: 294 AWQLDLP 300


>sp|GATE_PYRCJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum calidifontis (strain DSM

Query: 3 QTDLPP 8
+TDLPP
Sbjct: 428 ETDLPP 433


>sp|GATE_PYRAR|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum arsenaticum (strain DSM

Query: 3 QTDLPP 8
+TDLPP
Sbjct: 428 ETDLPP 433


>sp|GATE_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum aerophilum (strain ATCC

Query: 3 QTDLPP 8
+TDLPP
Sbjct: 428 ETDLPP 433


>sp|METXA_HALPT|HOMOSERINE O-acetyltransferase|Haloferax prahovense (strain DSM 18310

Query: 2 WQTDLPP 8
W TD PP
Sbjct: 120 WGTDFPP 126


>sp|METXA_HALGM|HOMOSERINE O-acetyltransferase|Haloferax gibbonsii (strain ATCC 33959

Query: 2 WQTDLPP 8
W TD PP
Sbjct: 120 WGTDFPP 126


>sp|LIVF_ARCFU|PROBABLE branched-chain amino acid transport|Archaeoglobus fulgidus

Query: 4 TDLPPH 9
T LPPH
Sbjct: 66 TSLPPH 71


>sp|KDPQ_HALS3|PROBABLE Kdp system regulatory protein|Halobacterium salinarum (strain ATCC

Query: 2 WQTDLPP 8
WQ ++PP
Sbjct: 264 WQGEVPP 270


>sp|METXA_HALVD|HOMOSERINE O-acetyltransferase|Haloferax volcanii (strain ATCC 29605

Query: 2 WQTDLPP 8
W TD PP
Sbjct: 120 WGTDFPP 126


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 WQTDLPPHH 10
W+ D+ HH
Sbjct: 237 WEADIKYHH 245


>sp|THIL_PYRAB|THIAMINE-MONOPHOSPHATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 WQTDLP 7
W+TD+P
Sbjct: 46 WKTDVP 51


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 DLPPHH 10
DLPP H
Sbjct: 521 DLPPTH 526


>sp|THIL_PYRHO|THIAMINE-MONOPHOSPHATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 WQTDLP 7
W+TD+P
Sbjct: 45 WRTDVP 50


>sp|SYFA_METKA|PHENYLALANINE--TRNA ligase alpha subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 WQTDLPPHH 10
W T+L P H
Sbjct: 221 WITELKPEH 229


>sp|AROE_IGNH4|SHIKIMATE dehydrogenase (NADP(+))|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 QTDLPPH 9
+ D+PPH
Sbjct: 34 KVDVPPH 40


>sp|NADM_PICTO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 SWQTDLPP 8
+W+ D+PP
Sbjct: 139 NWKKDVPP 146


>sp|UREG_NATPD|UREASE accessory protein UreG|Natronomonas pharaonis (strain ATCC 35678

Query: 3 QTDLPPH 9
+TDL PH
Sbjct: 154 KTDLAPH 160


>sp|UREG_HALWD|UREASE accessory protein UreG|Haloquadratum walsbyi (strain DSM 16790

Query: 3 QTDLPPH 9
+TDL PH
Sbjct: 154 KTDLAPH 160


>sp|NADA_METBF|QUINOLINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 WQTDLPPHH 10
W+ P HH
Sbjct: 167 WEGHCPTHH 175


>sp|FEOB_METJA|FE(2+) transporter FeoB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 DLPPHH 10
+LPP+H
Sbjct: 485 ELPPYH 490


>sp|ILVD_METHJ|DIHYDROXY-ACID dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SWQTDLPPH 9
SW T +P H
Sbjct: 39 SWNTIVPGH 47


>sp|UREG_HALMA|UREASE accessory protein UreG|Haloarcula marismortui (strain ATCC 43049

Query: 3 QTDLPPH 9
+TDL PH
Sbjct: 156 KTDLAPH 162


>sp|NADA_METMA|QUINOLINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 WQTDLPPHH 10
W+ P HH
Sbjct: 167 WEGHCPTHH 175


>sp|Y1571_AERPE|UNCHARACTERIZED protein APE_1571.1|Aeropyrum pernix (strain ATCC 700893

Query: 5 DLPPH 9
DLPPH
Sbjct: 351 DLPPH 355


>sp|NADA1_METAC|QUINOLINATE synthase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 WQTDLPPHH 10
W+ P HH
Sbjct: 167 WEGHCPTHH 175


>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain ATCC

Query: 2 WQTDLPP 8
W +DLPP
Sbjct: 246 WYSDLPP 252


>sp|CAS8B_HALVD|CRISPR-ASSOCIATED protein Cas8b|Haloferax volcanii (strain ATCC 29605

Query: 5 DLPPHH 10
DLPPH
Sbjct: 510 DLPPHQ 515


>sp|SYDND_METMJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 WQTDLPPHH 10
W TD+ P++
Sbjct: 322 WPTDIRPYY 330




52|Sequence|256|265|LPPHHPSSAC

>sp|RL15E_METHJ|LARGE ribosomal subunit protein eL15|Methanospirillum hungatei JF-1

Query: 1 LPPHHPS 7
L PHHPS
Sbjct: 135 LDPHHPS 141


>sp|RL15E_METAR|LARGE ribosomal subunit protein eL15|Methanocella arvoryzae (strain DSM

Query: 3 PHHPSSA 9
PHHPS A
Sbjct: 137 PHHPSIA 143


>sp|RADA_CENSY|DNA repair and recombination protein|Cenarchaeum symbiosum (strain A)

Query: 3 PHHPSS 8
PHHP+S
Sbjct: 302 PHHPAS 307


>sp|RL15E_DESA1|LARGE ribosomal subunit protein eL15|Desulfurococcus amylolyticus (strain

Query: 3 PHHPS 7
PHHPS
Sbjct: 136 PHHPS 140


>sp|LEUC_THEKO|3-ISOPROPYLMALATE dehydratase large subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 PHHPSSA 9
PHHPS+
Sbjct: 237 PHHPSNG 243


>sp|GATE_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanopyrus kandleri (strain AV19 /

Query: 2 PPHHPSS 8
PPH P S
Sbjct: 93 PPHEPCS 99


>sp|Y804_METJA|UNCHARACTERIZED protein MJ0804|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PPHHPS 7
P HHPS
Sbjct: 38 PQHHPS 43


>sp|LEU1_ARCFU|PROBABLE 2-isopropylmalate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 1 LPPHHP 6
+PP+HP
Sbjct: 273 MPPNHP 278


>sp|GYAR_THEPD|GLYOXYLATE reductase|Thermofilum pendens (strain DSM 2475

Query: 1 LPPHHP 6
LPP+HP
Sbjct: 272 LPPNHP 277


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 3 PHHPSS 8
PHHP++
Sbjct: 192 PHHPAT 197


>sp|Y300_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0300|Methanocaldococcus

Query: 1 LPPHHP 6
+PP+HP
Sbjct: 170 VPPNHP 175


>sp|RL15E_STAMF|LARGE ribosomal subunit protein eL15|Staphylothermus marinus (strain ATCC

Query: 3 PHHPS 7
PHHP+
Sbjct: 137 PHHPA 141


>sp|Y462_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 PPHHPS 7
PPHH S
Sbjct: 136 PPHHLS 141


>sp|Y394_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 PPHHPS 7
PPHH S
Sbjct: 139 PPHHLS 144


>sp|Y3551_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 PPHHPS 7
PPHH S
Sbjct: 136 PPHHLS 141


>sp|ECFA_METST|ENERGY-COUPLING factor transporter ATP-binding protein|Methanosphaera stadtmanae

Query: 2 PPHHPS 7
PPHH S
Sbjct: 137 PPHHLS 142


>sp|ECFA_METMP|ENERGY-COUPLING factor transporter ATP-binding protein|Methanococcus maripaludis

Query: 2 PPHHPS 7
PPHH S
Sbjct: 136 PPHHLS 141


>sp|ECFA_METJA|ENERGY-COUPLING factor transporter ATP-binding protein|Methanocaldococcus

Query: 2 PPHHPS 7
PPHH S
Sbjct: 136 PPHHLS 141


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 LPPHHP 6
LPPH P
Sbjct: 359 LPPHCP 364


>sp|Y583_METTM|PUTATIVE ABC transporter ATP-binding protein|Methanothermobacter

Query: 2 PPHHPS 7
PPHH S
Sbjct: 136 PPHHLS 141


>sp|Y3511_METJA|UNCHARACTERIZED protein MJECL11|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 HHPSS 8
HHPSS
Sbjct: 32 HHPSS 36


>sp|LADH_METJA|LACTALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 HHPSS 8
HHPSS
Sbjct: 162 HHPSS 166


>sp|CDC68_HALSA|ORC1-TYPE DNA replication protein 8|Halobacterium salinarum (strain ATCC

Query: 4 HHPSS 8
HHPSS
Sbjct: 96 HHPSS 100


>sp|HACA_METJA|METHANOGEN homoaconitase large subunit|Methanocaldococcus jannaschii (strain

Query: 3 PHHPSS 8
PHHP +
Sbjct: 277 PHHPDN 282


>sp|RL15E_THEON|LARGE ribosomal subunit protein eL15|Thermococcus onnurineus (strain NA1)

Query: 3 PHHP 6
PHHP
Sbjct: 135 PHHP 138


>sp|RL15E_THEGJ|LARGE ribosomal subunit protein eL15|Thermococcus gammatolerans (strain

Query: 3 PHHP 6
PHHP
Sbjct: 135 PHHP 138


>sp|RL15E_PYRHO|LARGE ribosomal subunit protein eL15|Pyrococcus horikoshii (strain ATCC

Query: 3 PHHP 6
PHHP
Sbjct: 135 PHHP 138


>sp|RL15E_PYRFU|LARGE ribosomal subunit protein eL15|Pyrococcus furiosus (strain ATCC

Query: 3 PHHP 6
PHHP
Sbjct: 135 PHHP 138


>sp|RL15E_PYRAB|LARGE ribosomal subunit protein eL15|Pyrococcus abyssi (strain GE5 /

Query: 3 PHHP 6
PHHP
Sbjct: 135 PHHP 138


>sp|RL15E_METMA|LARGE ribosomal subunit protein eL15|Methanosarcina mazei (strain ATCC

Query: 3 PHHP 6
PHHP
Sbjct: 137 PHHP 140


>sp|RL15E_METAC|LARGE ribosomal subunit protein eL15|Methanosarcina acetivorans (strain

Query: 3 PHHP 6
PHHP
Sbjct: 137 PHHP 140


>sp|SYK_METKA|LYSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 PPHHPSSAC 10
PPH P C
Sbjct: 385 PPHVPFRFC 393


>sp|RL15E_THEKO|LARGE ribosomal subunit protein eL15|Thermococcus kodakarensis (strain

Query: 3 PHHP 6
PHHP
Sbjct: 135 PHHP 138


>sp|GATB_METKA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 PPHH 5
PPHH
Sbjct: 277 PPHH 280


>sp|MTD_METJA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanocaldococcus

Query: 3 PHHP 6
PHHP
Sbjct: 259 PHHP 262


>sp|TRPD_METB6|ANTHRANILATE phosphoribosyltransferase|Methanoregula boonei (strain DSM 21154

Query: 2 PPHHPS 7
P HHP+
Sbjct: 155 PSHHPA 160


>sp|Y133_METTH|PUTATIVE ABC transporter ATP-binding protein|Methanothermobacter

Query: 2 PPHHPS 7
PPHH S
Sbjct: 138 PPHHFS 143


>sp|GUAAA_SACS2|GMP synthase [glutamine-hydrolyzing] subunit A|Saccharolobus

Query: 1 LPPHHP 6
+PPH P
Sbjct: 30 IPPHKP 35


>sp|COBQ_METHJ|PROBABLE cobyric acid synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PHHPSSAC 10
PHH AC
Sbjct: 93 PHHDVHAC 100


>sp|ATGT_METKA|TRNA-GUANINE(15) transglycosylase|Methanopyrus kandleri (strain AV19 /

Query: 1 LPPHHP 6
LPPH P
Sbjct: 216 LPPHRP 221


>sp|CYAS_METLZ|CYSTEATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 PHHP 6
PHHP
Sbjct: 24 PHHP 27


>sp|SAT_STAMF|SULFATE adenylyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 3 PHHP 6
PHHP
Sbjct: 161 PHHP 164




53|Sequence|261|270|PSSACSDGTL

>sp|GLCDH_SACSO|GLUCOSE 1-dehydrogenase|Saccharolobus solfataricus (Sulfolobus

Query: 1 PSSACSDGTL 10
P C DGTL
Sbjct: 170 PVWTCDDGTL 179


>sp|GLCD1_SACS2|GLUCOSE 1-dehydrogenase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PSSACSDGTL 10
P C DGTL
Sbjct: 170 PVWTCDDGTL 179


>sp|PYRG_METHJ|CTP synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 SSACSDGT 9
SS C DGT
Sbjct: 398 SSECGDGT 405


>sp|GLCD2_SACS2|GLUCOSE 1-dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PSSACSDGTL 10
P C DGTL
Sbjct: 172 PIWTCDDGTL 181


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PSSACSDGT 9
P CSDG+
Sbjct: 435 PPRKCSDGS 443


>sp|CHER_HALS3|CHEMOTAXIS protein methyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 SSACSDG 8
S+AC+DG
Sbjct: 100 SAACADG 106


>sp|Y2274_HALSA|UPF0213 protein VNG_2274C|Halobacterium salinarum (strain ATCC 700922

Query: 5 CSDGT 9
CSDGT
Sbjct: 9 CSDGT 13




54|Sequence|266|275|SDGTLKLNTA

>sp|FAU1_METKA|PROBABLE ribonuclease FAU-1|Methanopyrus kandleri (strain AV19 /

Query: 1 SDGTLKLNT 9
SDG LKL T
Sbjct: 144 SDGPLKLTT 152


>sp|RL30_METS5|LARGE ribosomal subunit protein uL30|Metallosphaera sedula (strain ATCC

Query: 2 DGTLKLNT 9
DG LKLN+
Sbjct: 100 DGELKLNS 107


>sp|AOR_PYRHO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus horikoshii (strain

Query: 1 SDGTLKLNT 9
SDGT+K T
Sbjct: 14 SDGTIKEET 22




55|Sequence|271|280|KLNTAASTED

***** No hits found ******


56|Sequence|276|285|ASTEDVKIVI

>sp|RL6_METM6|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 2 STEDVKIVI 10
STED K+VI
Sbjct: 47 STEDGKVVI 55


>sp|RL6_METM7|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 2 STEDVKIVI 10
STED K+VI
Sbjct: 47 STEDGKVVI 55


>sp|RL6_METM5|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 2 STEDVKIVI 10
STED K+VI
Sbjct: 47 STEDGKVVI 55


>sp|RL6_METMP|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 2 STEDVKIVI 10
STED K+VI
Sbjct: 47 STEDGKVVI 55


>sp|RL14E_METM5|LARGE ribosomal subunit protein eL14|Methanococcus maripaludis (strain

Query: 1 ASTEDVKIVI 10
ASTE+VK+ +
Sbjct: 62 ASTEEVKLAL 71


>sp|RL14E_METM7|LARGE ribosomal subunit protein eL14|Methanococcus maripaludis (strain

Query: 1 ASTEDVKIVI 10
ASTE+VK+ +
Sbjct: 62 ASTEEVKLAL 71


>sp|RL14E_METMP|LARGE ribosomal subunit protein eL14|Methanococcus maripaludis (strain

Query: 1 ASTEDVKIVI 10
ASTE+VK+ +
Sbjct: 62 ASTEEVKLAL 71


>sp|RL14E_METM6|LARGE ribosomal subunit protein eL14|Methanococcus maripaludis (strain

Query: 1 ASTEDVKIVI 10
ASTE+VK+ +
Sbjct: 62 ASTEEVKLAL 71


>sp|FLPA_THEAC|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermoplasma acidophilum (strain

Query: 1 ASTEDVKIVI 10
ASTED K ++
Sbjct: 184 ASTEDAKTIL 193


>sp|RL14E_METJA|LARGE ribosomal subunit protein eL14|Methanocaldococcus jannaschii

Query: 1 ASTEDVKIVI 10
ASTE+VK+ +
Sbjct: 62 ASTEEVKLAL 71


>sp|RL14E_METVS|LARGE ribosomal subunit protein eL14|Methanococcus vannielii (strain

Query: 1 ASTEDVKI 8
ASTE+VK+
Sbjct: 62 ASTEEVKL 69


>sp|Y1281_METJA|UNCHARACTERIZED protein MJ1281|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ASTEDVKIVI 10
+TEDVK VI
Sbjct: 179 GNTEDVKRVI 188




57|Sequence|281|290|VKIVIKTEVQ

>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VKIVIKTE 8
VK+V++TE
Sbjct: 927 VKVVVETE 934




58|Sequence|286|295|KTEVQEEEVV

>sp|RL7A_SULTO|LARGE ribosomal subunit protein eL8|Sulfurisphaera tokodaii (strain DSM

Query: 2 TEVQEEEVV 10
T+VQ EE+V
Sbjct: 55 TDVQPEEIV 63




59|Sequence|291|300|EEEVVATPVH

>sp|RL21_PICTO|LARGE ribosomal subunit protein eL21|Picrophilus torridus (strain ATCC

Query: 1 EEEVVATPVH 10
E++V+A PVH
Sbjct: 83 EKKVIAAPVH 92


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EEVVATPVH 10
EE++ TP H
Sbjct: 186 EEIILTPEH 194


>sp|RL21_THEVO|LARGE ribosomal subunit protein eL21|Thermoplasma volcanium (strain

Query: 4 VVATPVH 10
V+A+PVH
Sbjct: 86 VIASPVH 92


>sp|AAT_SACS2|ASPARTATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EEEVVATP 8
+EEV+ TP
Sbjct: 95 KEEVIVTP 102


>sp|PGP_STAMF|PHOSPHOGLYCOLATE phosphatase|Staphylothermus marinus (strain ATCC 43588

Query: 1 EEEVVAT 7
EEE+VAT
Sbjct: 76 EEEIVAT 82


>sp|METK_PYRAB|S-ADENOSYLMETHIONINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 EEVVATPV 9
EE+V TPV
Sbjct: 8 EEIVRTPV 15


>sp|SYW_PYRAE|TRYPTOPHAN--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EEEVVATP 8
EEE V TP
Sbjct: 2 EEEFVVTP 9


>sp|METK_PYRHO|S-ADENOSYLMETHIONINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EEVVATPV 9
EE+V TPV
Sbjct: 8 EEIVRTPV 15


>sp|METK_PYRFU|S-ADENOSYLMETHIONINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EEVVATPV 9
EE+V TPV
Sbjct: 8 EEIVRTPV 15




60|Sequence|296|305|ATPVHPTDLE

>sp|Y020_SULAC|UPF0284 protein Saci_0020|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ATPVHPTDLE 10
A+PV+P DL+
Sbjct: 179 ASPVNPKDLK 188


>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 2 TPVHPTDLE 10
+P+H DLE
Sbjct: 367 SPIHDVDLE 375


>sp|RL24_ARCFU|LARGE ribosomal subunit protein uL24|Archaeoglobus fulgidus (strain ATCC

Query: 1 ATPVHPTDL 9
A P+HP+++
Sbjct: 94 AVPIHPSNV 102


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PVHPTD 8
P+HPTD
Sbjct: 440 PLHPTD 445


>sp|SYE_METBF|GLUTAMATE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PVHPTD 8
P+HPTD
Sbjct: 440 PLHPTD 445


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TPVHPTDL 9
TP HP DL
Sbjct: 277 TPPHPFDL 284


>sp|Y1302_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ1302|Methanocaldococcus jannaschii

Query: 2 TPVHPTDL 9
+P+HP D+
Sbjct: 120 SPIHPRDV 127


>sp|RLMH_METVS|PUTATIVE ribosomal RNA large subunit|Methanococcus vannielii (strain ATCC

Query: 2 TPVHPTDLE 10
TP +P+D+E
Sbjct: 43 TPENPSDVE 51


>sp|RLMH_METMP|PUTATIVE ribosomal RNA large subunit|Methanococcus maripaludis (strain DSM

Query: 2 TPVHPTDLE 10
TP +P+D+E
Sbjct: 43 TPENPSDVE 51


>sp|RLMH_METM6|PUTATIVE ribosomal RNA large subunit|Methanococcus maripaludis (strain C6

Query: 2 TPVHPTDLE 10
TP +P+D+E
Sbjct: 43 TPENPSDVE 51


>sp|SYY_METBF|TYROSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ATPVHPTDLE 10
A VHP DL+
Sbjct: 289 AESVHPMDLK 298


>sp|SYR_KORCO|ARGININE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 ATPVHP 6
A PVHP
Sbjct: 129 ANPVHP 134


>sp|SYR_PYRAE|ARGININE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ATPVHP 6
A PVHP
Sbjct: 120 ANPVHP 125


>sp|T1R2_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 ATPVHPTDL 9
TPVH D+
Sbjct: 431 GTPVHKKDM 439


>sp|RS4_ARCFU|SMALL ribosomal subunit protein uS4|Archaeoglobus fulgidus (strain ATCC

Query: 2 TPVHPTD 8
TP HP D
Sbjct: 13 TPTHPWD 19


>sp|NAC_AERPE|NASCENT polypeptide-associated complex protein|Aeropyrum pernix (strain

Query: 3 PVHPTDLE 10
PV+P DLE
Sbjct: 3 PVNPRDLE 10


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 2 TPVHP 6
TP+HP
Sbjct: 223 TPIHP 227


>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 ATPVHP 6
A PVHP
Sbjct: 127 ANPVHP 132


>sp|SYDND_AERPE|ASPARTATE--TRNA(ASP/ASN) ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ATPVHPTDLE 10
+TPV P LE
Sbjct: 101 STPVEPLPLE 110


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 4 VHPTDLE 10
+HP DLE
Sbjct: 293 IHPEDLE 299


>sp|FUMC_METAC|FUMARATE hydratase class II|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PVHPTD 8
PVHP D
Sbjct: 139 PVHPND 144


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PVHPTD 8
P HPTD
Sbjct: 440 PRHPTD 445


>sp|HEM2_METTH|DELTA-AMINOLEVULINIC acid dehydratase|Methanothermobacter thermautotrophicus (strain

Query: 2 TPVHPTDL 9
T +HP+DL
Sbjct: 28 TRLHPSDL 35




61|Sequence|301|310|PTDLEAHGTL

>sp|CCA_METTH|CCA-ADDING enzyme|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 DLEAHGT 9
DLE HGT
Sbjct: 211 DLEGHGT 217


>sp|ARCH_PYRIL|PROTEIN archease|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PTDLEAHG 8
P D+E HG
Sbjct: 109 PYDIEKHG 116


>sp|ISCS2_ARCFU|CYSTEINE desulfurase IscS 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 EAHGTL 10
EAHGTL
Sbjct: 341 EAHGTL 346


>sp|ISCS1_ARCFU|CYSTEINE desulfurase IscS 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 EAHGTL 10
EAHGTL
Sbjct: 341 EAHGTL 346


>sp|SYS_METMJ|SERINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 DLEAHGTL 10
DLE HG L
Sbjct: 138 DLENHGAL 145


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TDLEAHG 8
TD+E HG
Sbjct: 283 TDVEVHG 289


>sp|PYRG_PYRHO|CTP synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DLEAHGT 9
D+E HGT
Sbjct: 331 DIEEHGT 337


>sp|PYRG_PYRFU|CTP synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DLEAHGT 9
D+E HGT
Sbjct: 331 DVETHGT 337


>sp|PYRG_PYRAB|CTP synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 DLEAHGT 9
D+E HGT
Sbjct: 331 DIEEHGT 337


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 DLEAHGT 9
D+E HGT
Sbjct: 414 DVERHGT 420


>sp|PGK_METS5|PHOSPHOGLYCERATE kinase|Metallosphaera sedula (strain ATCC 51363

Query: 2 TDLEAHGTL 10
TDLE H L
Sbjct: 71 TDLEEHSRL 79


>sp|FER_THEAC|ZINC-CONTAINING ferredoxin|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PTDLEAHGT 9
PT L HGT
Sbjct: 52 PTKLGIHGT 60




62|Sequence|306|315|AHGTLFGPGQ

>sp|GLYA_NITMS|SERINE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 HGTLFGP 8
H TLFGP
Sbjct: 237 HKTLFGP 243


>sp|GLYA_ARCFU|SERINE hydroxymethyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HGTLFGP 8
H T FGP
Sbjct: 238 HKTFFGP 244


>sp|AROK_METAR|SHIKIMATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 AHGTLFGPG 9
+HGT +G G
Sbjct: 3 SHGTAYGAG 11


>sp|CYB_SULAC|CYTOCHROME b|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GTLFGPG 9
G LFGPG
Sbjct: 169 GWLFGPG 175


>sp|UVRC_METHJ|UVRABC system protein C|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 GTLFGP 8
GTL+GP
Sbjct: 122 GTLYGP 127


>sp|GLYA_METJA|SERINE hydroxymethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 HGTLFGP 8
H T FGP
Sbjct: 225 HKTFFGP 231


>sp|SQRD_ACIAM|SULFIDE-QUINONE reductase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 HGTLFGPGQ 10
H T+F PG+
Sbjct: 203 HVTVFSPGE 211


>sp|GLYA_CENSY|SERINE hydroxymethyltransferase|Cenarchaeum symbiosum (strain A)

Query: 2 HGTLFGP 8
H TLFGP
Sbjct: 238 HKTLFGP 244


>sp|GVPK_HALMT|GAS vesicle protein K|Haloferax mediterranei (strain ATCC 33500

Query: 1 AHGTLFGPG 9
+HG+LF G
Sbjct: 104 SHGSLFNSG 112


>sp|ILVE_METJA|PUTATIVE branched-chain-amino-acid aminotransferase|Methanocaldococcus

Query: 2 HGTLFGPG 9
HG L+G G
Sbjct: 22 HGLLYGDG 29


>sp|GLYA_KORCO|SERINE hydroxymethyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 HGTLFGP 8
H T FGP
Sbjct: 235 HKTFFGP 241


>sp|ALF1_AERPE|PROBABLE fructose-bisphosphate aldolase class 1|Aeropyrum pernix (strain

Query: 2 HGTLFGPGQ 10
HG GPG+
Sbjct: 29 HGIEHGPGE 37


>sp|ARGD_METJA|ACETYLORNITHINE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HGTLFG 7
HGT FG
Sbjct: 278 HGTTFG 283


>sp|ILVE_ARCFU|PUTATIVE branched-chain-amino-acid aminotransferase|Archaeoglobus fulgidus

Query: 2 HGTLFGPG 9
HG L+G G
Sbjct: 23 HGFLYGDG 30


>sp|AATC_HALVD|A-TYPE ATP synthase subunit C|Haloferax volcanii (strain ATCC 29605

Query: 3 GTLFGPG 9
GT+FG G
Sbjct: 154 GTIFGDG 160




63|Sequence|311|320|FGPGQATRFF

>sp|Y915_ARCFU|UNCHARACTERIZED protein AF_0915|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FGPGQATRFF 10
FGPG + R F
Sbjct: 69 FGPGDSIRLF 78


>sp|PURL_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GPGQATRFF 10
G G+ATRFF
Sbjct: 492 GIGEATRFF 500


>sp|PURL_SACI7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 GPGQATRFF 10
G G+ATRFF
Sbjct: 492 GIGEATRFF 500


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 2 GPGQATRFF 10
G G+ATRFF
Sbjct: 492 GIGEATRFF 500


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 2 GPGQATRFF 10
G G+ATRFF
Sbjct: 492 GIGEATRFF 500


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 2 GPGQATRFF 10
G G+ATRFF
Sbjct: 492 GIGEATRFF 500


>sp|PURL_SACI2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 GPGQATRFF 10
G G+ATRFF
Sbjct: 492 GIGEATRFF 500


>sp|PURL_SACI1|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 GPGQATRFF 10
G G+ATRFF
Sbjct: 492 GIGEATRFF 500


>sp|BIOB_CENSY|BIOTIN synthase|Cenarchaeum symbiosum (strain A)

Query: 3 PGQATRFF 10
PG+A RFF
Sbjct: 247 PGEAERFF 254


>sp|THIE_PICTO|THIAMINE-PHOSPHATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 3 PGQATRFF 10
PG+ATR F
Sbjct: 189 PGEATRTF 196


>sp|RFCL_METMJ|REPLICATION factor C large subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PGQATRF 9
PGQAT F
Sbjct: 448 PGQATLF 454


>sp|NAR7_HALMT|PUTATIVE respiratory nitrate reductase heme|Haloferax mediterranei (strain

Query: 2 GPGQATRF 9
GPG T+F
Sbjct: 163 GPGTTTKF 170


>sp|METK_ARCFU|S-ADENOSYLMETHIONINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GQATRFF 10
G+AT+FF
Sbjct: 90 GRATKFF 96




64|Sequence|316|325|ATRFFPSPAQ

>sp|SYE_NANEQ|GLUTAMATE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 TRFFPSPA 9
TRF P+P+
Sbjct: 86 TRFAPNPS 93


>sp|EF2_METTP|ELONGATION factor 2|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 RFFPSPAQ 10
RF PSP +
Sbjct: 254 RFLPSPLE 261




65|Sequence|321|330|PSPAQEGAWE

>sp|BACR1_HALMA|BACTERIORHODOPSIN-I marismortui (strain ATCC 43049

Query: 1 PSPAQEGAW 9
P+P EG W
Sbjct: 2 PAPGSEGIW 10


>sp|GLYA_PYRAE|SERINE hydroxymethyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PSPAQEGA 8
P+P +EGA
Sbjct: 210 PNPLKEGA 217


>sp|SEPS_METBU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PSPAQEGAWE 10
PSP + AWE
Sbjct: 399 PSPCEFVAWE 408


>sp|GLYA_PYRIL|SERINE hydroxymethyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PSPAQEGA 8
P+P +EGA
Sbjct: 210 PNPLREGA 217


>sp|SEPS_METTP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PSPAQEGAWE 10
PSP + AWE
Sbjct: 398 PSPCEFDAWE 407


>sp|GLYA_PYRAR|SERINE hydroxymethyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PSPAQEGA 8
P+P +EGA
Sbjct: 210 PNPLKEGA 217


>sp|Y045_METTH|MEMO1 family protein MTH_45|Methanothermobacter thermautotrophicus

Query: 2 SPAQEGAWE 10
S Q+GAWE
Sbjct: 93 SLMQQGAWE 101


>sp|DHQS_METBF|3-DEHYDROQUINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 AQEGAWE 10
A EG WE
Sbjct: 10 ADEGGWE 16


>sp|GLYA_PYRCJ|SERINE hydroxymethyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PSPAQEGA 8
P+P +EGA
Sbjct: 210 PNPLREGA 217


>sp|DHQS_METMA|3-DEHYDROQUINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 AQEGAWE 10
A EG WE
Sbjct: 10 ADEGGWE 16


>sp|DHQS_METAC|3-DEHYDROQUINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 AQEGAWE 10
A EG WE
Sbjct: 10 ADEGGWE 16


>sp|GLYA_PYRNV|SERINE hydroxymethyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PSPAQEGA 8
P+P +EGA
Sbjct: 210 PNPLKEGA 217


>sp|SEPS_METAR|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PSPAQEGAWE 10
PSP + WE
Sbjct: 397 PSPCRFDVWE 406


>sp|PURL_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PSPAQEGAWE 10
P+PA+E +E
Sbjct: 19 PTPAEEALFE 28




66|Sequence|326|335|EGAWESQGSS

>sp|RFRNP_METTP|RNA-FREE ribonuclease P|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 AWESQGSS 10
AWES+G +
Sbjct: 18 AWESEGCT 25


>sp|MRE11_SULTO|DNA double-strand break repair protein|Sulfurisphaera tokodaii (strain

Query: 1 EGAWESQ 7
EGAW+ Q
Sbjct: 169 EGAWQIQ 175


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 AWESQGS 9
AW SQG+
Sbjct: 243 AWASQGT 249


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 AWESQGS 9
AW SQG+
Sbjct: 243 AWASQGT 249


>sp|DHQS_METAC|3-DEHYDROQUINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EGAWESQ 7
EG WE Q
Sbjct: 12 EGGWEEQ 18


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 AWESQGS 9
AW SQG+
Sbjct: 243 AWASQGT 249


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 AWESQGS 9
AW SQG+
Sbjct: 243 AWASQGT 249


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 AWESQGS 9
AW SQG+
Sbjct: 243 AWASQGT 249


>sp|DHQS_METMA|3-DEHYDROQUINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EGAWESQ 7
EG WE Q
Sbjct: 12 EGGWEEQ 18


>sp|DHQS_METBF|3-DEHYDROQUINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EGAWESQ 7
EG WE Q
Sbjct: 12 EGGWEQQ 18


>sp|ENO_ARCFU|ENOLASE fulgidus (strain ATCC 49558

Query: 1 EGAWESQGS 9
EGAW +Q S
Sbjct: 191 EGAWAAQIS 199




67|Sequence|331|340|SQGSSFPSQD

>sp|TREZ_SACS2|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SQGSSFPSQ 9
S SSFPSQ
Sbjct: 536 SSNSSFPSQ 544


>sp|CMR7B_SACS2|PUTATIVE CRISPR system CMR subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 QGSSFPSQD 10
+G FPSQD
Sbjct: 98 RGFVFPSQD 106




68|Sequence|336|345|FPSQDPVLGL

>sp|Y2061_THEKO|PUTATIVE phosphate permease TK2061|Thermococcus kodakarensis (strain ATCC

Query: 1 FPSQDPVLGL 10
FPS DP +G+
Sbjct: 232 FPSSDPFIGV 241


>sp|CMR7B_SACS2|PUTATIVE CRISPR system CMR subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 FPSQDP 6
FPSQDP
Sbjct: 102 FPSQDP 107


>sp|Y1020_PYRFU|PUTATIVE phosphate permease PF1020|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FPSQDPVLG 9
FP+ DP LG
Sbjct: 237 FPATDPYLG 245


>sp|SYM_METBU|METHIONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 FPSQDPVL 8
FPS+ PVL
Sbjct: 4 FPSEKPVL 11


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 1 FPSQDPVLG 9
P DPVLG
Sbjct: 894 LPGADPVLG 902


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 1 FPSQDPVLG 9
P DPVLG
Sbjct: 893 LPGADPVLG 901


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 1 FPSQDPVLG 9
P DPVLG
Sbjct: 893 LPGADPVLG 901


>sp|Y640_PYRHO|PUTATIVE phosphate permease PH0640|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FPSQDPVLG 9
FP+ DP LG
Sbjct: 232 FPNVDPYLG 240


>sp|Y1401_PYRAB|PUTATIVE phosphate permease PYRAB14010|Pyrococcus abyssi (strain GE5 /

Query: 1 FPSQDPVLG 9
FP DP LG
Sbjct: 231 FPKVDPYLG 239


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 1 FPSQDPVLG 9
P DPVLG
Sbjct: 901 LPGVDPVLG 909


>sp|CARB2_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 1 FPSQDPVLG 9
P DPVLG
Sbjct: 439 LPGVDPVLG 447


>sp|CARB_METBA|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri

Query: 1 FPSQDPVLG 9
P DPVLG
Sbjct: 217 LPGADPVLG 225


>sp|ADEC_METB6|ADENINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 1 FPSQDPVLGL 10
FP +D +LGL
Sbjct: 160 FPGRDGILGL 169


>sp|METAA_METAX|HOMOSERINE O-acetyltransferase|Methanomethylophilus alvi (strain Mx1201)

Query: 2 PSQDPVL 8
PS+DPV+
Sbjct: 269 PSKDPVM 275


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 1 FPSQDPVLG 9
P DP+LG
Sbjct: 881 LPGVDPILG 889


>sp|CARB2_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 1 FPSQDPVLG 9
+P DPVLG
Sbjct: 351 WPGVDPVLG 359


>sp|FPOH_METAC|F(420)H(2) dehydrogenase subunit H|Methanosarcina acetivorans (strain ATCC

Query: 1 FPSQDPVLGL 10
F + +PVLGL
Sbjct: 278 FVANNPVLGL 287




69|Sequence|341|350|PVLGLREPAR

>sp|MRE11_HALSA|DNA double-strand break repair protein|Halobacterium salinarum (strain

Query: 3 LGLREPAR 10
LGL EPAR
Sbjct: 332 LGLDEPAR 339


>sp|TSGDD_HALVD|GLUCOSE import ATP-binding protein TsgD13|Haloferax volcanii (strain ATCC

Query: 2 VLGLREPA 9
VLG REPA
Sbjct: 103 VLGEREPA 110


>sp|ILVC_METBU|KETOL-ACID reductoisomerase (NADP(+))|Methanococcoides burtonii (strain DSM

Query: 2 VLGLREPAR 10
V+GLRE +R
Sbjct: 44 VIGLREGSR 52


>sp|GLPA2_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A2|Haloferax volcanii

Query: 2 VLGLREPAR 10
VLG+ EP R
Sbjct: 374 VLGVEEPCR 382


>sp|ARLY_METKA|ARGININOSUCCINATE lyase|Methanopyrus kandleri (strain AV19 /

Query: 2 VLGLREPAR 10
+LG R+PAR
Sbjct: 215 LLGFRKPAR 223




70|Sequence|346|355|REPARPERDM

>sp|Y1852_ARCFU|UNCHARACTERIZED protein AF_1852|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EPARPE 7
+PARPE
Sbjct: 122 DPARPE 127


>sp|Y303_PYRFU|UPF0284 protein PF0303|Pyrococcus furiosus (strain ATCC 43587

Query: 1 REPARPE 7
REPA PE
Sbjct: 105 REPALPE 111


>sp|METXA_HALLT|HOMOSERINE O-acetyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 EPARPERD 9
+ ARPERD
Sbjct: 415 DSARPERD 422


>sp|PURL_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EPARPERD 9
EP +P+RD
Sbjct: 374 EPTQPDRD 381


>sp|PYRI_THEVO|ASPARTATE carbamoyltransferase regulatory chain|Thermoplasma volcanium

Query: 1 REPARPE 7
REP +PE
Sbjct: 119 REPVKPE 125


>sp|TRM56_METHJ|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanospirillum hungatei

Query: 5 RPERDM 10
RP+RDM
Sbjct: 10 RPQRDM 15




71|Sequence|351|360|PERDMGELSP

>sp|GAL1_PYRFU|GALACTOKINASE furiosus (strain ATCC 43587

Query: 2 ERDMGELSP 10
E+D+G+L P
Sbjct: 224 EKDLGKLPP 232


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 ERDMGELSP 10
++ +GELSP
Sbjct: 769 DKSLGELSP 777


>sp|PUR8_PYRHO|ADENYLOSUCCINATE lyase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ERDMGELSP 10
ERD+ EL P
Sbjct: 416 ERDLEELKP 424


>sp|SYR_SACS2|ARGININE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PERDMGEL 8
PE+++GE+
Sbjct: 252 PEKEIGEI 259


>sp|FOLD_PYRAE|BIFUNCTIONAL protein FolD|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PERDMGELSP 10
PE+D+ L+P
Sbjct: 121 PEKDVDALTP 130


>sp|HIS8_METAC|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PERDMGELSP 10
PE+ +G +SP
Sbjct: 152 PEKILGAVSP 161


>sp|FOLD_PYRAR|BIFUNCTIONAL protein FolD|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PERDMGELSP 10
PE+D+ L+P
Sbjct: 121 PEKDVDALTP 130


>sp|FOLD_PYRCJ|BIFUNCTIONAL protein FolD|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PERDMGELSP 10
PE+D+ L+P
Sbjct: 117 PEKDVDALTP 126


>sp|ADEC_CENSY|ADENINE deaminase|Cenarchaeum symbiosum (strain A)

Query: 3 RDMGELSP 10
RD+G +SP
Sbjct: 326 RDLGGISP 333




72|Sequence|356|365|GELSPAVAQE

>sp|Y2132_ARCFU|UNCHARACTERIZED protein AF_2132|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GELSPAVAQ 9
GE +PA+A+
Sbjct: 106 GEFTPAIAE 114


>sp|HIS3_METTP|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GELSPAVAQE 10
G+L PA+AQ+
Sbjct: 10 GKLIPAIAQD 19


>sp|HIS3_NATPD|PHOSPHORIBOSYL-AMP cyclohydrolase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ELSPAVAQE 10
EL PAVAQ+
Sbjct: 11 ELLPAVAQD 19


>sp|SYFB_METAR|PHENYLALANINE--TRNA ligase beta subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 GELSPAV 7
GELSP V
Sbjct: 526 GELSPVV 532




73|Sequence|361|370|AVAQEETPPG

>sp|DNLI_METTF|DNA ligase|Methanothermobacter thermautotrophicus (Methanobacterium

Query: 1 AVAQEETPPG 10
AVA+EE PG
Sbjct: 204 AVAREEGEPG 213


>sp|SRP54_METBU|SIGNAL recognition particle 54 kDa|Methanococcoides burtonii (strain DSM

Query: 4 QEETPPG 10
+EE PPG
Sbjct: 62 KEEVPPG 68


>sp|DNLI_METTH|DNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 AVAQEETPPG 10
AVA+EE PG
Sbjct: 204 AVAREEGEPG 213


>sp|HIS7_PYRCJ|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 AVAQEETP 8
AVAQ ETP
Sbjct: 20 AVAQVETP 27


>sp|SRP54_STAMF|SIGNAL recognition particle 54 kDa|Staphylothermus marinus (strain ATCC

Query: 4 QEETPPG 10
+EE PPG
Sbjct: 58 KEEPPPG 64


>sp|SRP54_AERPE|SIGNAL recognition particle 54 kDa|Aeropyrum pernix (strain ATCC 700893

Query: 4 QEETPPG 10
+EE PPG
Sbjct: 57 KEEPPPG 63




74|Sequence|366|375|ETPPGDWLFG

>sp|CMR6_PYRFU|CRISPR system Cmr subunit Cmr6|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PPGDW 7
PPGDW
Sbjct: 276 PPGDW 280


>sp|EPDB_METMP|MINOR structural pilin EpdB|Methanococcus maripaludis (strain DSM 14266

Query: 1 ETPPGDWLF 9
++PP +W F
Sbjct: 73 KSPPANWTF 81


>sp|Y996_METJA|METALLOPROTEASE MJ0996|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PGDWLF 9
PGDW F
Sbjct: 346 PGDWSF 351


>sp|RS4_PYRHO|SMALL ribosomal subunit protein uS4|Pyrococcus horikoshii (strain ATCC

Query: 1 ETPPGDWL 8
ETPP W+
Sbjct: 12 ETPPHPWI 19


>sp|RS4_PYRFU|SMALL ribosomal subunit protein uS4|Pyrococcus furiosus (strain ATCC

Query: 1 ETPPGDWL 8
ETPP W+
Sbjct: 12 ETPPHPWI 19


>sp|RS4_PYRAB|SMALL ribosomal subunit protein uS4|Pyrococcus abyssi (strain GE5 /

Query: 1 ETPPGDWL 8
ETPP W+
Sbjct: 12 ETPPHPWI 19


>sp|SPSS1_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocella arvoryzae (strain DSM 22066

Query: 2 TPPGDWL 8
T PGDW+
Sbjct: 100 TSPGDWI 106


>sp|HDRC1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit C1|Methanococcus

Query: 5 GDWLFG 10
G+W+FG
Sbjct: 20 GEWIFG 25


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 2 TPPGDW 7
TPPG W
Sbjct: 447 TPPGVW 452


>sp|YPZ2_METTF|UNCHARACTERIZED protein ORF2'|Methanothermobacter thermautotrophicus

Query: 3 PPGDWLF 9
P GDW F
Sbjct: 132 PSGDWCF 138


>sp|YPV2_METTF|UNCHARACTERIZED protein ORF2|Methanothermobacter thermautotrophicus

Query: 3 PPGDWLF 9
P GDW F
Sbjct: 132 PSGDWCF 138


>sp|PRIS_AERPE|DNA primase small subunit PriS|Aeropyrum pernix (strain ATCC 700893

Query: 4 PGDWL 8
PGDWL
Sbjct: 271 PGDWL 275


>sp|Y83A_METJA|PROBABLE pilin MJ0832.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PPGDW 7
PPG W
Sbjct: 79 PPGTW 83


>sp|Y1334_METJA|PUTATIVE UTP--glucose-1-phosphate uridylyltransferase|Methanocaldococcus

Query: 1 ETPPG 5
ETPPG
Sbjct: 215 ETPPG 219


>sp|GFCR_ARCFU|TRANSCRIPTIONAL regulator GfcR|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ETPPGD 6
ETPP D
Sbjct: 44 ETPPSD 49


>sp|Y1477_THEKO|MEMO1 family protein TK1477|Thermococcus kodakarensis (strain ATCC

Query: 3 PPGDWL 8
PPG W+
Sbjct: 89 PPGTWI 94


>sp|GLMM_METBU|PROBABLE phosphoglucosamine mutase|Methanococcoides burtonii (strain DSM

Query: 3 PPGDWLF 9
P G W+F
Sbjct: 309 PSGSWIF 315


>sp|Y3117_METAC|UPF0228 protein MA_3117|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 PGDWLFG 10
P DW+ G
Sbjct: 143 PADWVVG 149


>sp|Y1626_METJA|UNCHARACTERIZED protein MJ1626|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PPGDWLF 9
P G W+F
Sbjct: 10 PSGTWIF 16


>sp|GLMM_METAC|PROBABLE phosphoglucosamine mutase|Methanosarcina acetivorans (strain ATCC

Query: 3 PPGDWLF 9
P G W+F
Sbjct: 310 PSGSWIF 316


>sp|GLMM_METMA|PROBABLE phosphoglucosamine mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PPGDWLF 9
P G W+F
Sbjct: 310 PSGSWIF 316


>sp|GAPN_THETE|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Thermoproteus tenax

Query: 4 PGDWLF 9
PGDW +
Sbjct: 139 PGDWTY 144


>sp|SPSS_METBF|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 PGDWL 8
PGDW+
Sbjct: 103 PGDWI 107


>sp|SPSS_METAC|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 PGDWL 8
PGDW+
Sbjct: 103 PGDWI 107


>sp|CAS6L_PYRFU|PUTATIVE CRISPR-associated endoribonuclease-like protein Cas6|Pyrococcus

Query: 1 ETPPGDWLF 9
E+P G W F
Sbjct: 44 ESPHGYWTF 52


>sp|GLMM_METBF|PROBABLE phosphoglucosamine mutase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PPGDWLF 9
P G W+F
Sbjct: 310 PSGSWIF 316


>sp|LEUC_SULTO|3-ISOPROPYLMALATE dehydratase large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ETPPGDWLFG 10
E PG W+ G
Sbjct: 163 EGKPGKWING 172


>sp|AMT2_HALMT|AMMONIUM transporter Amt2|Haloferax mediterranei (strain ATCC 33500

Query: 6 DWLFG 10
DWLFG
Sbjct: 108 DWLFG 112


>sp|GCSPB_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 3 PPGDWLFG 10
PPG W G
Sbjct: 330 PPGRWSVG 337


>sp|ACDD_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit delta|Archaeoglobus fulgidus

Query: 4 PGDWLF 9
PG+W+F
Sbjct: 444 PGEWIF 449


>sp|SPSS_METMA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 PGDWL 8
PGDW+
Sbjct: 103 PGDWV 107


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 TPPGDW 7
+ PGDW
Sbjct: 145 SSPGDW 150


>sp|GAPN_SACS2|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Saccharolobus solfataricus

Query: 4 PGDW 7
PGDW
Sbjct: 146 PGDW 149


>sp|Y539_PYRAB|MEMO1 family protein PYRAB05390|Pyrococcus abyssi (strain GE5 /

Query: 3 PPGDWL 8
P GDW+
Sbjct: 89 PEGDWV 94


>sp|AMT1_HALMT|AMMONIUM transporter Amt1|Haloferax mediterranei (strain ATCC 33500

Query: 6 DWLFG 10
DWLFG
Sbjct: 102 DWLFG 106




75|Sequence|371|380|DWLFGGVRWG

>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DWLFGGVRWG 10
DW F G WG
Sbjct: 739 DWNFRGSWWG 748


>sp|BE_THEKO|1,4-ALPHA-GLUCAN branching enzyme TK1436|Thermococcus kodakarensis (strain ATCC

Query: 2 WLFGGVRW 9
W F GV+W
Sbjct: 361 WWFEGVKW 368


>sp|AROA_ARCFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 1 DWLFGGV 7
+WLF GV
Sbjct: 67 EWLFSGV 73


>sp|Y105_METJA|UNCHARACTERIZED protein MJ0105|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DWLFGGV 7
+W FGG+
Sbjct: 32 NWYFGGI 38


>sp|AMT2_HALMT|AMMONIUM transporter Amt2|Haloferax mediterranei (strain ATCC 33500

Query: 1 DWLFGGV 7
DWLFG V
Sbjct: 108 DWLFGAV 114


>sp|RS7_PYRHO|SMALL ribosomal subunit protein uS7|Pyrococcus horikoshii (strain ATCC

Query: 3 LFGGVRW 9
+FGG+R+
Sbjct: 143 MFGGIRY 149


>sp|RS7_PYRFU|SMALL ribosomal subunit protein uS7|Pyrococcus furiosus (strain ATCC

Query: 3 LFGGVRW 9
+FGG+R+
Sbjct: 140 MFGGIRY 146


>sp|RS7_PYRAB|SMALL ribosomal subunit protein uS7|Pyrococcus abyssi (strain GE5 /

Query: 3 LFGGVRW 9
+FGG+R+
Sbjct: 140 MFGGIRY 146


>sp|ISF_METTE|IRON-SULFUR flavoprotein|Methanosarcina thermophila

Query: 4 FGGVRW 9
FGG+ W
Sbjct: 153 FGGITW 158


>sp|AMT2_METJA|AMMONIUM transporter Amt2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DWLFGGVRW 9
DWL G V W
Sbjct: 74 DWLIGCVAW 82


>sp|Y1089_METJA|UNCHARACTERIZED protein MJ1089|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WLFGGVRW 9
+LFG V W
Sbjct: 88 FLFGTVEW 95


>sp|AMT1_HALMT|AMMONIUM transporter Amt1|Haloferax mediterranei (strain ATCC 33500

Query: 1 DWLFGGV 7
DWLFG V
Sbjct: 102 DWLFGAV 108


>sp|LYSK_PYRAE|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrobaculum aerophilum

Query: 5 GGVRWG 10
GGV WG
Sbjct: 76 GGVVWG 81


>sp|SYE_METS5|GLUTAMATE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 DWLFGGVRW 9
DW+ +RW
Sbjct: 152 DWIRDDLRW 160


>sp|ARGD_METTH|ACETYLORNITHINE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 4 FGGVRWG 10
FGG WG
Sbjct: 276 FGGNPWG 282


>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WLFGGV 7
WL GGV
Sbjct: 521 WLVGGV 526


>sp|Y83B_METJA|PROBABLE pilin MJ0835.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LFGGVRW 9
++GG+ W
Sbjct: 78 IYGGISW 84


>sp|Y934_PYRNV|UPF0282 protein Tneu_0934|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 DWLFGGVR 8
+W FGG R
Sbjct: 141 EWAFGGTR 148


>sp|DHE3_THELN|GLUTAMATE dehydrogenase|Thermococcus litoralis (strain ATCC 51850

Query: 5 GGVRW 9
GG+RW
Sbjct: 70 GGIRW 74


>sp|DHE3_PYRFU|GLUTAMATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 GGVRW 9
GG+RW
Sbjct: 70 GGIRW 74


>sp|DHE3_PYRAB|GLUTAMATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 5 GGVRW 9
GG+RW
Sbjct: 70 GGIRW 74


>sp|DHE3_PYRHR|GLUTAMATE dehydrogenase|Pyrococcus horikoshii

Query: 5 GGVRW 9
GG+RW
Sbjct: 70 GGIRW 74


>sp|DHE3_PYRHO|GLUTAMATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 GGVRW 9
GG+RW
Sbjct: 70 GGIRW 74


>sp|DHE3_PYREN|GLUTAMATE dehydrogenase|Pyrococcus endeavori

Query: 5 GGVRW 9
GG+RW
Sbjct: 70 GGIRW 74


>sp|IXTPA_PYRHO|DITP/XTP pyrophosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 FGGVRWG 10
F GV WG
Sbjct: 122 FSGVTWG 128




76|Sequence|376|385|GVRWGWNFRC

>sp|GLKA_PYRFU|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RWGWN 7
RWGWN
Sbjct: 102 RWGWN 106


>sp|GLKA_THEKO|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus kodakarensis (strain ATCC

Query: 3 RWGWN 7
RWGW+
Sbjct: 101 RWGWD 105


>sp|HIS5_PYRAE|IMIDAZOLE glycerol phosphate synthase subunit|Pyrobaculum aerophilum (strain

Query: 1 GVRWGWN 7
GVRWG N
Sbjct: 135 GVRWGEN 141


>sp|Y039_METKA|UPF0273 protein MK0039|Methanopyrus kandleri (strain AV19 /

Query: 4 WGWNFR 9
+GWNFR
Sbjct: 74 FGWNFR 79


>sp|Y1880_METMJ|UNCHARACTERIZED solute-binding protein Memar_1880|Methanoculleus marisnigri (strain

Query: 1 GVRWGWN 7
GVRWG++
Sbjct: 153 GVRWGFS 159


>sp|RL30_PYRCJ|LARGE ribosomal subunit protein uL30|Pyrobaculum calidifontis (strain DSM

Query: 3 RWGWN 7
+WGWN
Sbjct: 97 KWGWN 101


>sp|G1PDH_CENSY|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Cenarchaeum symbiosum (strain A)

Query: 1 GVRWGWN 7
G++W W+
Sbjct: 66 GIKWSWH 72


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 RWGW 6
RWGW
Sbjct: 323 RWGW 326


>sp|PDXS_HYPBU|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Hyperthermus butylicus (strain

Query: 4 WGWNFR 9
W W FR
Sbjct: 152 WKWEFR 157


>sp|TRM56_METS3|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanobrevibacter smithii

Query: 3 RWGWNF 8
RWG NF
Sbjct: 55 RWGGNF 60


>sp|SYH_METPE|HISTIDINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GVRWGWNF 8
GVR+ +NF
Sbjct: 242 GVRYSYNF 249


>sp|GPMA_METMA|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 WGWNF 8
W WNF
Sbjct: 143 WRWNF 147


>sp|Y1979_PYRFU|PROTEIN PF1979|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GVRWGWN 7
V WGW+
Sbjct: 150 AVEWGWD 156


>sp|Y010_PYRHO|PROTEIN PH0010|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VRWGWN 7
V WGW+
Sbjct: 152 VEWGWD 157


>sp|RS3_PICTO|SMALL ribosomal subunit protein uS3|Picrophilus torridus (strain ATCC

Query: 5 GWNFR 9
GWN+R
Sbjct: 105 GWNYR 109


>sp|TFE_METMJ|TRANSCRIPTION factor E|Methanoculleus marisnigri (strain ATCC 35101

Query: 6 WNFRC 10
WNF C
Sbjct: 136 WNFEC 140


>sp|Y174_THEKO|PROTEIN TK0174|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VRWGWN 7
V WGW+
Sbjct: 151 VEWGWD 156


>sp|TRUD_METBF|PROBABLE tRNA pseudouridine synthase D|Methanosarcina barkeri (strain Fusaro

Query: 1 GVRWGWNFR 9
G WG NFR
Sbjct: 128 GDLWGNNFR 136


>sp|RNH2_PYRAR|RIBONUCLEASE HII|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 VRWGW 6
VRW W
Sbjct: 186 VRWSW 190


>sp|THII_AERPE|PROBABLE tRNA sulfurtransferase|Aeropyrum pernix (strain ATCC 700893

Query: 4 WGWNFR 9
W W +R
Sbjct: 232 WAWGYR 237


>sp|TRM56_METB6|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanoregula boonei

Query: 3 RWGWNFRC 10
RWG F C
Sbjct: 56 RWGGQFFC 63


>sp|Y010_PYRAB|PROTEIN PYRAB00100|Pyrococcus abyssi (strain GE5 /

Query: 2 VRWGWN 7
+ WGW+
Sbjct: 151 IEWGWD 156


>sp|Y1450_THEGJ|PROTEIN TGAM_1450|Thermococcus gammatolerans (strain DSM 15229

Query: 2 VRWGWN 7
V WGW+
Sbjct: 151 VEWGWD 156


>sp|Y1965_THEON|PROTEIN TON_1965|Thermococcus onnurineus (strain NA1)

Query: 2 VRWGWN 7
+ WGW+
Sbjct: 151 IEWGWD 156


>sp|SYFA_METTH|PHENYLALANINE--TRNA ligase alpha subunit|Methanothermobacter thermautotrophicus (strain

Query: 6 WNFRC 10
WNF C
Sbjct: 279 WNFDC 283


>sp|RL30_PYRNV|LARGE ribosomal subunit protein uL30|Pyrobaculum neutrophilum (strain

Query: 3 RWGW 6
RWGW
Sbjct: 93 RWGW 96


>sp|SYK_PYRFU|LYSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 WGWNFRC 10
WG +RC
Sbjct: 193 WGVKYRC 199


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VRWGWN 7
+ W WN
Sbjct: 435 IEWDWN 440


>sp|RL30_PYRAE|LARGE ribosomal subunit protein uL30|Pyrobaculum aerophilum (strain ATCC

Query: 3 RWGWN 7
+WGW+
Sbjct: 96 KWGWH 100


>sp|RNH2_PYRNV|RIBONUCLEASE HII|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 VRWGW 6
VRW W
Sbjct: 186 VRWSW 190




77|Sequence|381|390|WNFRCKPPVG

>sp|GPMA_METMA|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WNFRCKPPVG 10
WNF PP G
Sbjct: 145 WNFEPGPPEG 154


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 WNFRCKP 7
W FR KP
Sbjct: 619 WEFRAKP 625


>sp|AROD_PYRAB|3-DEHYDROQUINATE dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 2 NFRCKPPVG 10
NFR PP G
Sbjct: 113 NFRETPPFG 121


>sp|PRIL_THEKO|DNA primase large subunit PriL|Thermococcus kodakarensis (strain ATCC

Query: 4 RCKPPV 9
RCKPP+
Sbjct: 312 RCKPPL 317


>sp|PORB_PYRFU|PYRUVATE synthase subunit PorB|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WNFRCKPPVG 10
WN + +PP G
Sbjct: 257 WNIKIQPPGG 266


>sp|PRIL_METTH|DNA primase large subunit PriL|Methanothermobacter thermautotrophicus

Query: 4 RCKPPV 9
RC+PP+
Sbjct: 348 RCEPPL 353


>sp|PORB_PYRHO|PYRUVATE synthase subunit PorB|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WNFRCKPPVG 10
WN + +PP G
Sbjct: 257 WNIKIQPPGG 266


>sp|GPMI_HALWD|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 WNFRCKPP 8
W+F PP
Sbjct: 271 WSFETDPP 278


>sp|HCP_METJA|HYDROXYLAMINE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 RCKPP 8
+CKPP
Sbjct: 348 KCKPP 352


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 WNFRCKP 7
W F+ KP
Sbjct: 631 WEFKAKP 637


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WNFRCKPPV 9
W+F K PV
Sbjct: 141 WDFENKKPV 149


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WNFRCKP 7
W F+ KP
Sbjct: 620 WEFKAKP 626


>sp|Y1064_METJA|UNCHARACTERIZED acetyltransferase MJ1064|Methanocaldococcus jannaschii (strain

Query: 2 NFRCKPPV 9
NF C+P V
Sbjct: 86 NFHCEPYV 93


>sp|COFG_METM6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C6 /

Query: 2 NFRCKPPV 9
NFR KP +
Sbjct: 234 NFRSKPKI 241


>sp|PYRI_PYRNV|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum neutrophilum

Query: 3 FRCKPP 8
FRCK P
Sbjct: 106 FRCKNP 111


>sp|COFG_METMP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 NFRCKPPV 9
NFR KP +
Sbjct: 212 NFRSKPQI 219


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FRCKPPV 9
+RCK PV
Sbjct: 336 WRCKTPV 342




78|Sequence|386|395|KPPVGLNPRT

>sp|SRP54_METTP|SIGNAL recognition particle 54 kDa|Methanothrix thermoacetophila (strain

Query: 1 KPPVGLNPR 9
KPP G+NPR
Sbjct: 64 KPPAGMNPR 72


>sp|SRP54_METAC|SIGNAL recognition particle 54 kDa|Methanosarcina acetivorans (strain

Query: 1 KPPVGLNPR 9
+PP G+NPR
Sbjct: 64 EPPAGMNPR 72


>sp|SRP54_METMA|SIGNAL recognition particle 54 kDa|Methanosarcina mazei (strain ATCC

Query: 2 PPVGLNPR 9
PP G+NPR
Sbjct: 65 PPAGMNPR 72


>sp|SRP54_METBF|SIGNAL recognition particle 54 kDa|Methanosarcina barkeri (strain Fusaro

Query: 2 PPVGLNPR 9
PP G+NPR
Sbjct: 65 PPAGMNPR 72


>sp|SRP54_THEGJ|SIGNAL recognition particle 54 kDa|Thermococcus gammatolerans (strain

Query: 1 KPPVGLNPR 9
KPP G++PR
Sbjct: 64 KPPAGVSPR 72


>sp|SRP54_PYRCJ|SIGNAL recognition particle 54 kDa|Pyrobaculum calidifontis (strain DSM

Query: 1 KPPVGLNPR 9
KPP G+ PR
Sbjct: 61 KPPAGIPPR 69


>sp|Y4021_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 KPPVGLNPRT 10
+P GL+PRT
Sbjct: 173 EPTAGLDPRT 182


>sp|SRP54_PYRIL|SIGNAL recognition particle 54 kDa|Pyrobaculum islandicum (strain DSM

Query: 1 KPPVGLNPR 9
KPP G+ PR
Sbjct: 62 KPPAGIPPR 70


>sp|SRP54_PYRAE|SIGNAL recognition particle 54 kDa|Pyrobaculum aerophilum (strain ATCC

Query: 1 KPPVGLNPR 9
KPP G+ PR
Sbjct: 62 KPPAGIPPR 70


>sp|SRP54_PYRAR|SIGNAL recognition particle 54 kDa|Pyrobaculum arsenaticum (strain DSM

Query: 1 KPPVGLNPR 9
KPP G+ PR
Sbjct: 62 KPPAGIPPR 70


>sp|TRM4_METJA|TRNA (cytosine(48)-C(5))-methyltransferase|Methanocaldococcus

Query: 2 PPVGLNPR 9
PP+ LNPR
Sbjct: 75 PPIVLNPR 82


>sp|SRP54_PYRNV|SIGNAL recognition particle 54 kDa|Pyrobaculum neutrophilum (strain DSM

Query: 1 KPPVGLNPR 9
KPP G+ PR
Sbjct: 62 KPPAGIPPR 70


>sp|SRP54_HALMA|SIGNAL recognition particle 54 kDa|Haloarcula marismortui (strain ATCC

Query: 1 KPPVGLNPR 9
+PP G PR
Sbjct: 64 EPPAGTTPR 72


>sp|SRP54_METS3|SIGNAL recognition particle 54 kDa|Methanobrevibacter smithii (strain

Query: 1 KPPVGLNPR 9
+PP G+ PR
Sbjct: 63 EPPKGITPR 71


>sp|KAE1B_METJA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 KPP-VGLNPR 9
KPP G+NPR
Sbjct: 33 KPPKQGINPR 42


>sp|FLAJ_METJA|FLAGELLA accessory protein J|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PPVGLNPR 9
P VGL PR
Sbjct: 10 PRVGLKPR 17


>sp|NNR_METTH|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanothermobacter

Query: 3 PVGLNPRT 10
P GLNP T
Sbjct: 179 PSGLNPET 186


>sp|SRP54_THEVO|SIGNAL recognition particle 54 kDa|Thermoplasma volcanium (strain ATCC

Query: 1 KPPVGL 6
KPPVG+
Sbjct: 64 KPPVGM 69


>sp|SRP54_METBU|SIGNAL recognition particle 54 kDa|Methanococcoides burtonii (strain DSM

Query: 3 PVGLNPR 9
P G+NPR
Sbjct: 66 PPGMNPR 72


>sp|AROD_SULTO|3-DEHYDROQUINATE dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PVGLNP 8
P+G+NP
Sbjct: 159 PIGVNP 164


>sp|AROE_METM7|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus maripaludis (strain C7 /

Query: 3 PVGLNPRT 10
PVG++P T
Sbjct: 195 PVGMHPNT 202


>sp|RBL_METMA|RIBULOSE bisphosphate carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KPPVGLN 7
KP VGLN
Sbjct: 151 KPKVGLN 157


>sp|AROE_METTH|SHIKIMATE dehydrogenase (NADP(+))|Methanothermobacter thermautotrophicus

Query: 3 PVGLNPRT 10
PVG++P T
Sbjct: 197 PVGMHPHT 204


>sp|ECFA_METTH|ENERGY-COUPLING factor transporter ATP-binding protein|Methanothermobacter

Query: 1 KPPVGLNPRT 10
+P GL+P T
Sbjct: 163 EPTTGLDPET 172


>sp|PYCB_METJA|PYRUVATE carboxylase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KPPVGLNP 8
KPP +NP
Sbjct: 374 KPPAPINP 381


>sp|DPHB_PYRIL|DIPHTHINE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 PVGLNP 8
P GLNP
Sbjct: 233 PAGLNP 238


>sp|ASPD_METBF|L-ASPARTATE dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KPPVGL 6
KPP+GL
Sbjct: 148 KPPMGL 153




79|Sequence|391|400|LNPRTGPEGL

>sp|Y1031_SACS2|UNCHARACTERIZED solute-binding protein SSO1031|Saccharolobus solfataricus (strain

Query: 2 NPRTGPEGL 10
NP T PEGL
Sbjct: 216 NPNTDPEGL 224


>sp|Y2034_SULTO|UNCHARACTERIZED solute-binding protein STK_20340|Sulfurisphaera tokodaii (strain

Query: 2 NPRTGPEGL 10
NP + PEGL
Sbjct: 189 NPSSDPEGL 197


>sp|Y916_METST|UPF0425 pyridoxal phosphate-dependent protein Msp_0916|Methanosphaera

Query: 1 LNPRTGPEGL 10
LNP+T P G
Sbjct: 277 LNPQTTPTGF 286


>sp|MUTL_METTP|DNA mismatch repair protein MutL|Methanothrix thermoacetophila (strain

Query: 2 NPRTGPEG 9
NPRT P G
Sbjct: 531 NPRTCPHG 538


>sp|PROF2_LOKSG|LOKI profilin-2|Lokiarchaeum sp. (strain GC14_75)

Query: 1 LNPRTGPEGL 10
+NPR GP L
Sbjct: 110 VNPRAGPRDL 119


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 LNPRTG 6
+NPRTG
Sbjct: 857 INPRTG 862


>sp|SYH_PYRHO|HISTIDINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PRTGPE 8
P+TGPE
Sbjct: 334 PQTGPE 339


>sp|PROF1_LOKSG|LOKI profilin-1|Lokiarchaeum sp. (strain GC14_75)

Query: 1 LNPRTGP 7
+NPR GP
Sbjct: 110 VNPRAGP 116


>sp|THII_AERPE|PROBABLE tRNA sulfurtransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 NPRTGPEGL 10
NPR P+G
Sbjct: 352 NPRASPQGF 360


>sp|Y162_ARCFU|UNCHARACTERIZED protein AF_0162|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LNPRTGPEGL 10
+ P T P+G+
Sbjct: 107 MEPHTSPQGI 116


>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PRTGPEGL 10
PRT PE L
Sbjct: 639 PRTSPERL 646


>sp|RL1_METHJ|LARGE ribosomal subunit protein uL1|Methanospirillum hungatei JF-1

Query: 1 LNPRTGPEG 9
L PR GP G
Sbjct: 121 LGPRLGPRG 129


>sp|HMEB_ARCFU|HDR-LIKE menaquinol oxidoreductase integral membrane|Archaeoglobus fulgidus

Query: 1 LNPRTG 6
LNP+TG
Sbjct: 294 LNPKTG 299


>sp|EF1A_SACS2|ELONGATION factor 1-alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LNPRTGPEG 9
L+PRTG E
Sbjct: 365 LDPRTGQEA 373


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 2 NPRTGPE 8
+PR GPE
Sbjct: 913 DPRLGPE 919


>sp|CBID_METMJ|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LNPRTGPEG 9
LNPR G G
Sbjct: 188 LNPRVGVHG 196


>sp|MTRB_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanothermobacter marburgensis

Query: 1 LNPRTGPEG 9
L+P T PEG
Sbjct: 58 LDPTTIPEG 66


>sp|RL13_PYRHO|LARGE ribosomal subunit protein uL13|Pyrococcus horikoshii (strain ATCC

Query: 2 NPRTGP 7
NPR GP
Sbjct: 60 NPRRGP 65


>sp|RL13_PYRFU|LARGE ribosomal subunit protein uL13|Pyrococcus furiosus (strain ATCC

Query: 2 NPRTGP 7
NPR GP
Sbjct: 60 NPRRGP 65


>sp|RL13_PYRAB|LARGE ribosomal subunit protein uL13|Pyrococcus abyssi (strain GE5 /

Query: 2 NPRTGP 7
NPR GP
Sbjct: 60 NPRRGP 65


>sp|RL1_METB6|LARGE ribosomal subunit protein uL1|Methanoregula boonei (strain DSM

Query: 1 LNPRTGPEG 9
L PR GP G
Sbjct: 121 LGPRLGPRG 129


>sp|RL13_THEKO|LARGE ribosomal subunit protein uL13|Thermococcus kodakarensis (strain

Query: 2 NPRTGP 7
NPR GP
Sbjct: 60 NPRRGP 65




80|Sequence|396|405|GPEGLPYSSP

>sp|TRM5B_PYRAB|TRNA (guanine(37)-N(1))-methyltransferase Trm5b|Pyrococcus abyssi

Query: 1 GPEGLPY 7
GPEG PY
Sbjct: 280 GPEGDPY 286


>sp|DNAG_CALMQ|DNA primase DnaG|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 GPEGLP 6
GPEGLP
Sbjct: 158 GPEGLP 163


>sp|HEM1_NATPD|GLUTAMYL-TRNA reductase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GPEGLP 6
GPEG+P
Sbjct: 428 GPEGVP 433


>sp|THII_SACS2|PROBABLE tRNA sulfurtransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 GPEGLP 6
GP+GLP
Sbjct: 159 GPKGLP 164


>sp|THII_SACI6|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GPEGLP 6
GP+GLP
Sbjct: 161 GPKGLP 166


>sp|THII_SACI4|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GPEGLP 6
GP+GLP
Sbjct: 161 GPKGLP 166


>sp|THII_SACI3|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 GPEGLP 6
GP+GLP
Sbjct: 161 GPKGLP 166


>sp|THII_THEVO|TRNA sulfurtransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GPEGLPYSS 9
GP GLP S
Sbjct: 159 GPGGLPLGS 167


>sp|Y1447_ARCFU|UNCHARACTERIZED protein AF_1447|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PEGLPYSS 9
P+G+ YSS
Sbjct: 11 PDGMTYSS 18


>sp|THII_PYRAE|TRNA sulfurtransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GPEGLPYSS 9
GP GLP S
Sbjct: 161 GPGGLPLGS 169


>sp|THII_SACI7|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GPEGLP 6
GP GLP
Sbjct: 161 GPRGLP 166


>sp|THII_SACI2|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GPEGLP 6
GP GLP
Sbjct: 161 GPRGLP 166


>sp|THII_SACI1|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GPEGLP 6
GP GLP
Sbjct: 161 GPRGLP 166


>sp|TFE_HALSA|TRANSCRIPTION factor E|Halobacterium salinarum (strain ATCC 700922

Query: 1 GPEGLPYSS 9
GP+G+P ++
Sbjct: 21 GPKGMPVAA 29


>sp|THII_DESA1|TRNA sulfurtransferase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 GPEGLPYSS 9
GP GLP S
Sbjct: 163 GPGGLPLGS 171


>sp|GCSPA_HALSA|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 4 GLPYSSP 10
G PY+SP
Sbjct: 3 GSPYASP 9


>sp|GCSPA_HALS3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 4 GLPYSSP 10
G PY+SP
Sbjct: 3 GSPYASP 9


>sp|TFE_HALMA|TRANSCRIPTION factor E|Haloarcula marismortui (strain ATCC 43049

Query: 1 GPEGLPYSS 9
GP+G+P ++
Sbjct: 21 GPKGMPVAA 29


>sp|DOXA_ACIAM|THIOSULFATE dehydrogenase [quinone] small subunit|Acidianus ambivalens

Query: 1 GPEGLPYSSP 10
GP+ P S+P
Sbjct: 68 GPDAYPASAP 77


>sp|NAH1_METJA|NA(+)/H(+) antiporter 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 LPYSSP 10
LPY+SP
Sbjct: 114 LPYTSP 119


>sp|TRUA_HALSA|TRNA pseudouridine synthase A|Halobacterium salinarum (strain ATCC

Query: 1 GPEGLPYSSP 10
GP+G+P + P
Sbjct: 208 GPDGVPPADP 217


>sp|TRUA_HALS3|TRNA pseudouridine synthase A|Halobacterium salinarum (strain ATCC 29341

Query: 1 GPEGLPYSSP 10
GP+G+P + P
Sbjct: 208 GPDGVPPADP 217


>sp|G1PDH_METKA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanopyrus kandleri (strain AV19 /

Query: 3 EGLPYSSP 10
EG PYS P
Sbjct: 138 EGRPYSEP 145


>sp|CAS6_PYRHO|CRISPR-ASSOCIATED endoribonuclease Cas6|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PEGLPY 7
P+GLPY
Sbjct: 68 PKGLPY 73


>sp|PCKG_THEVO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PEGLPYSS 9
PEG+P S+
Sbjct: 394 PEGVPVSA 401


>sp|PCKG_THEAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PEGLPYSS 9
PEG+P S+
Sbjct: 394 PEGVPVSA 401




81|Sequence|401|410|PYSSPDNGEA

>sp|PELO_NITMS|PROTEIN pelota homolog|Nitrosopumilus maritimus (strain SCM1)

Query: 2 YSSPDNGE 9
YS PD GE
Sbjct: 48 YSRPDKGE 55


>sp|Y163_METJA|UNCHARACTERIZED protein MJ0163|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PYSSPDNG 8
PY +PD G
Sbjct: 49 PYVAPDEG 56


>sp|GLMS_METMA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina mazei (strain ATCC

Query: 2 YSSPDNGEA 10
Y SPD EA
Sbjct: 138 YGSPDGKEA 146


>sp|GLCD2_HALTV|GLUCOSE 1-dehydrogenase 2|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 PYSSPDNGEA 10
P +P+NGEA
Sbjct: 19 PKPTPENGEA 28


>sp|PELO_CENSY|PROTEIN pelota homolog|Cenarchaeum symbiosum (strain A)

Query: 2 YSSPDNGE 9
Y+ PD GE
Sbjct: 48 YARPDRGE 55




82|Sequence|406|415|DNGEAILDPS

>sp|TMG10_ARCFU|TRNA (guanine(10)-N2)-dimethyltransferase|Archaeoglobus fulgidus (strain

Query: 3 GEAILDP 9
GE +LDP
Sbjct: 177 GETLLDP 183


>sp|ASPG_THEKO|L-ASPARAGINASE kodakarensis (strain ATCC BAA-918

Query: 2 NGEAILDP 9
NGE + DP
Sbjct: 191 NGEPLFDP 198


>sp|GLMS_AERPE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Aeropyrum pernix (strain ATCC 700893

Query: 3 GEAILDP 9
GE +LDP
Sbjct: 576 GETLLDP 582


>sp|RAD50_METMA|DNA double-strand break repair Rad50|Methanosarcina mazei (strain ATCC

Query: 1 DNGEAILD 8
DN +A+LD
Sbjct: 479 DNSKAVLD 486




83|Sequence|411|420|ILDPSQAPRP

>sp|SIHH_METKA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanopyrus kandleri (strain AV19 /

Query: 1 ILDPSQAPR 9
I DPS AP+
Sbjct: 11 IRDPSLAPK 19


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 DPSQAPRP 10
DPS AP P
Sbjct: 329 DPSTAPYP 336


>sp|AATI_THEKO|A-TYPE ATP synthase subunit I|Thermococcus kodakarensis (strain ATCC

Query: 1 ILDPSQAPRP 10
+LDP + P P
Sbjct: 456 LLDPLREPMP 465


>sp|PURP_CALMQ|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Caldivirga maquilingensis (strain ATCC

Query: 3 DPSQAPRP 10
DP+Q RP
Sbjct: 137 DPTQVDRP 144


>sp|Y1691_METAC|UPF0210 protein MA_1691|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ILDPSQAPRP 10
ILD S AP P
Sbjct: 283 ILDLSLAPTP 292


>sp|Y081_METMA|UPF0210 protein MM_0081|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ILDPSQAPRP 10
ILD S AP P
Sbjct: 272 ILDLSLAPTP 281


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 DPSQAPRP 10
DP +AP P
Sbjct: 918 DPEEAPGP 925


>sp|Y3181_METBF|UPF0210 protein Mbar_A3181|Methanosarcina barkeri (strain Fusaro /

Query: 1 ILDPSQAPRP 10
ILD S AP P
Sbjct: 272 ILDLSLAPTP 281




84|Sequence|416|425|QAPRPFNEPC

>sp|CBIZ_METMA|ADENOSYLCOBINAMIDE amidohydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QAPRPFNEP 9
Q PR FN P
Sbjct: 37 QVPRTFNPP 45


>sp|PURP_CALMQ|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Caldivirga maquilingensis (strain ATCC

Query: 3 PRPFNEP 9
PR FN+P
Sbjct: 132 PRSFNDP 138


>sp|TRPA_HALMA|TRYPTOPHAN synthase alpha chain|Haloarcula marismortui (strain ATCC 43049

Query: 1 QAPRPFNE 8
Q PRPF E
Sbjct: 121 QGPRPFVE 128


>sp|DNLI_METKA|DNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 PRPFNE 8
PRPF E
Sbjct: 311 PRPFQE 316


>sp|DNLI_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PRPFNE 8
PRPF E
Sbjct: 313 PRPFQE 318


>sp|DNLI_IGNH4|DNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 PRPFNE 8
PRPF E
Sbjct: 320 PRPFQE 325


>sp|AQPM_METTH|AQUAPORIN AqpM|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 APRPFN 7
AP PFN
Sbjct: 38 APNPFN 43


>sp|GSA_NATPD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PRPFNEP 9
P PFN+P
Sbjct: 176 PVPFNDP 182


>sp|GSA_HALLT|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 PRPFNEP 9
P PFN+P
Sbjct: 175 PIPFNDP 181


>sp|EF1A_DESMO|ELONGATION factor 1-alpha|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 3 PRPFNEP 9
P+P N+P
Sbjct: 228 PKPINKP 234


>sp|AATA_SULAC|A-TYPE ATP synthase subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PRPFNE 8
PRPF E
Sbjct: 198 PRPFKE 203


>sp|AATA_AERPE|A-TYPE ATP synthase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 3 PRPFNE 8
PRPF E
Sbjct: 205 PRPFKE 210


>sp|AATA_METS5|A-TYPE ATP synthase subunit A|Metallosphaera sedula (strain ATCC 51363

Query: 1 QAPRPFNE 8
+ PRPF E
Sbjct: 195 RVPRPFKE 202


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 4 RPFNEP 9
RPF+EP
Sbjct: 193 RPFSEP 198


>sp|Y1782_THEKO|UNCHARACTERIZED serpin-like protein TK1782|Thermococcus kodakarensis (strain ATCC

Query: 1 QAPRPFNEP 9
+ PRP N P
Sbjct: 23 ENPRPTNNP 31


>sp|AATA_SACS2|A-TYPE ATP synthase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 3 PRPFNE 8
PRPF E
Sbjct: 197 PRPFKE 202


>sp|AATA_SACI6|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.4 /

Query: 3 PRPFNE 8
PRPF E
Sbjct: 197 PRPFKE 202


>sp|AATA_SACI4|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.14.25 /

Query: 3 PRPFNE 8
PRPF E
Sbjct: 197 PRPFKE 202


>sp|AATA_SACI3|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.27)

Query: 3 PRPFNE 8
PRPF E
Sbjct: 197 PRPFKE 202


>sp|AATA_SACI2|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 PRPFNE 8
PRPF E
Sbjct: 197 PRPFRE 202


>sp|AATA_SACI1|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 PRPFNE 8
PRPF E
Sbjct: 197 PRPFRE 202


>sp|AATA_SACI7|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 PRPFNE 8
PRPF E
Sbjct: 197 PRPFRE 202


>sp|AATA_PYRNV|A-TYPE ATP synthase subunit A|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 PRPFNE 8
PRPF E
Sbjct: 200 PRPFRE 205


>sp|AATA_PYRIL|A-TYPE ATP synthase subunit A|Pyrobaculum islandicum (strain DSM 4184

Query: 3 PRPFNE 8
PRPF E
Sbjct: 200 PRPFRE 205


>sp|AATA_PYRCJ|A-TYPE ATP synthase subunit A|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 PRPFNE 8
PRPF E
Sbjct: 200 PRPFRE 205


>sp|AATA_PYRAR|A-TYPE ATP synthase subunit A|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 PRPFNE 8
PRPF E
Sbjct: 200 PRPFRE 205


>sp|AATA_PYRAE|A-TYPE ATP synthase subunit A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PRPFNE 8
PRPF E
Sbjct: 200 PRPFKE 205




85|Sequence|421|430|FNEPCKYPGR

>sp|Y325_METJA|UNCHARACTERIZED protein MJ0325|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FNEPCKYPGR 10
+ EP +YP R
Sbjct: 42 YVEPTRYPDR 51


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 1 FNEPCKYPG 9
N P KYPG
Sbjct: 372 LNGPEKYPG 380


>sp|MCRB_METVA|METHYL-COENZYME M reductase subunit beta|Methanococcus vannielii

Query: 5 CKYPGR 10
CK PGR
Sbjct: 67 CKVPGR 72


>sp|Y931_METLZ|UPF0212 protein Mlab_0931|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 NEPCKYPGR 10
N PC Y G+
Sbjct: 48 NMPCPYCGK 56


>sp|DCDB_HALSA|DCTP deaminase, dUMP-forming|Halobacterium salinarum (strain ATCC

Query: 2 NEPCKYPGR 10
N PC +P R
Sbjct: 49 NVPCIHPNR 57


>sp|DCDB_HALS3|DCTP deaminase, dUMP-forming|Halobacterium salinarum (strain ATCC

Query: 2 NEPCKYPGR 10
N PC +P R
Sbjct: 49 NVPCIHPNR 57


>sp|RLSX_METTH|FUSED uL13/uS9 ribosomal subunit protein|Methanothermobacter

Query: 2 NEPCKYPGR 10
+EP KY GR
Sbjct: 263 SEPKKYGGR 271


>sp|THS_METTL|CHAPERONIN subunit|Methanothermococcus thermolithotrophicus

Query: 1 FNEPCKYP 8
F E CK+P
Sbjct: 357 FVEECKHP 364


>sp|THS_METMP|CHAPERONIN subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 FNEPCKYP 8
F E CK+P
Sbjct: 355 FVEECKHP 362


>sp|Y1676_METJA|UNCHARACTERIZED protein MJ1676|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NEPCKYPG 9
NEP + PG
Sbjct: 150 NEPIEIPG 157


>sp|THS_METJA|THERMOSOME subunit|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FNEPCKYP 8
F E CK+P
Sbjct: 359 FVEQCKHP 366


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 3 EPCKYPGR 10
+P K PGR
Sbjct: 635 DPMKIPGR 642


>sp|RIBA_ARCFU|GTP cyclohydrolase-2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 KYPGR 10
KYPGR
Sbjct: 101 KYPGR 105


>sp|KPTA_METMA|PROBABLE RNA 2'-phosphotransferase|Methanosarcina mazei (strain ATCC

Query: 3 EPCKYPGR 10
+ CK PGR
Sbjct: 17 QQCKRPGR 24


>sp|KPTA_METAC|PROBABLE RNA 2'-phosphotransferase|Methanosarcina acetivorans (strain ATCC

Query: 3 EPCKYPGR 10
+ CK PGR
Sbjct: 17 QQCKRPGR 24




86|Sequence|426|435|KYPGRTKGFG

>sp|AROD_METJA|3-DEHYDROQUINATE dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KYPGRTKGFG 10
KYPG+ G G
Sbjct: 162 KYPGKIIGIG 171


>sp|Y1178_METJA|UNCHARACTERIZED glycosyltransferase MJ1178|Methanocaldococcus jannaschii (strain

Query: 3 PGRTKGFG 10
P R++GFG
Sbjct: 256 PSRSEGFG 263


>sp|Y870_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 YPGRTK 7
YPGRT+
Sbjct: 19 YPGRTE 24


>sp|RNJL_SACS2|RNASE aCSPSF2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PGRTKGF 9
PG+ KGF
Sbjct: 120 PGKVKGF 126


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 2 YPGRT 6
YPGRT
Sbjct: 899 YPGRT 903


>sp|CDC6_THEVO|ORC1-TYPE DNA replication protein|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KYPGRTKGF 9
KY GRT+GF
Sbjct: 362 KY-GRTRGF 369


>sp|GUAAA_METB6|GMP synthase [glutamine-hydrolyzing] subunit A|Methanoregula boonei

Query: 2 YPGRTKGFG 10
+PG++ G+G
Sbjct: 90 HPGKSGGYG 98


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PGRTKGFG 10
PG+T GF
Sbjct: 661 PGKTTGFA 668


>sp|PURO_THEKO|IMP cyclohydrolase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KYPGRTKGFG 10
+Y GRT G G
Sbjct: 2 RYVGRTLGIG 11


>sp|PRIS_ARCFU|DNA primase small subunit PriS|Archaeoglobus fulgidus (strain ATCC

Query: 2 YPGRTK 7
YPGR K
Sbjct: 311 YPGRVK 316


>sp|UPPS_METAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanosarcina

Query: 4 GRTKGFG 10
GRT+ FG
Sbjct: 45 GRTRSFG 51


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 1 KYPGRTKG 8
+YPG T G
Sbjct: 398 RYPGETLG 405


>sp|CUTA_SULAC|GLYCERALDEHYDE dehydrogenase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 2 YPGRTKGFG 10
YP TKG G
Sbjct: 699 YPTGTKGVG 707


>sp|GATB_METKA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 KYPGRTKGFG 10
+Y G+ KG G
Sbjct: 166 RYSGKVKGDG 175


>sp|MCRG_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 YPGRTK 7
YPG+TK
Sbjct: 8 YPGQTK 13


>sp|DPO4_METS5|DNA polymerase IV|Metallosphaera sedula (strain ATCC 51363

Query: 2 YPGRTKGFG 10
Y GRTK G
Sbjct: 33 YSGRTKDSG 41


>sp|NUCS2_HALSA|ENDONUCLEASE NucS 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 KYPGRTKGF 9
+Y GRT G+
Sbjct: 37 EYNGRTSGY 45




87|Sequence|431|440|TKGFGHKPGL

>sp|MDH_AERPE|MALATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 1 TKGFGHKPGL 10
T G G KPG+
Sbjct: 74 TAGIGRKPGM 83


>sp|CAS1_HALVD|CRISPR-ASSOCIATED endonuclease Cas1|Haloferax volcanii (strain ATCC 29605

Query: 1 TKGFGHKPG 9
T GF H+PG
Sbjct: 218 TVGFVHEPG 226


>sp|CBIMQ_METLZ|PUTATIVE fused cobalt transport protein|Methanocorpusculum labreanum (strain

Query: 1 TKGFGHKP 8
++GFG KP
Sbjct: 329 SRGFGKKP 336


>sp|TRM56_HALWD|TRNA (cytidine(56)-2'-O)-methyltransferase|Haloquadratum walsbyi

Query: 4 FGHKPG 9
+GH+PG
Sbjct: 14 YGHRPG 19


>sp|PPSA_METTH|PROBABLE phosphoenolpyruvate synthase|Methanothermobacter thermautotrophicus

Query: 2 KGFGHKPGL 10
KG G PGL
Sbjct: 364 KGLGASPGL 372


>sp|MDH_PYRCJ|MALATE dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 TKGFGHKPGL 10
T GF KPG+
Sbjct: 75 TAGFPRKPGM 84


>sp|CAS6L_PYRHO|PUTATIVE CRISPR-associated endoribonuclease-like protein Cas6nc|Pyrococcus

Query: 3 GFGHKPGL 10
GFG K GL
Sbjct: 223 GFGEKTGL 230


>sp|OGG1_THEAC|8-OXOGUANINE DNA glycosylase/AP lyase|Thermoplasma acidophilum (strain ATCC

Query: 1 TKGFGHKPGL 10
+ GFG +PG+
Sbjct: 180 SAGFGIEPGI 189


>sp|IXTPA_ARCFU|DITP/XTP pyrophosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TKGFGHKP 8
T+GFG+ P
Sbjct: 135 TQGFGYDP 142


>sp|SYT_META3|THREONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 TKGFGHKP 8
TKGF ++P
Sbjct: 609 TKGFPYRP 616


>sp|TRM56_HALSA|TRNA (cytidine(56)-2'-O)-methyltransferase|Halobacterium salinarum

Query: 4 FGHKPG 9
+GH+PG
Sbjct: 12 YGHRPG 17


>sp|TRM56_HALS3|TRNA (cytidine(56)-2'-O)-methyltransferase|Halobacterium salinarum

Query: 4 FGHKPG 9
+GH+PG
Sbjct: 12 YGHRPG 17


>sp|ADEC_METTP|ADENINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 GHKPGL 10
GH PGL
Sbjct: 196 GHAPGL 201


>sp|ADEC_METBF|ADENINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 5 GHKPGL 10
GH PGL
Sbjct: 174 GHAPGL 179


>sp|ADEC_ARCFU|ADENINE deaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 GHKPGL 10
GH PGL
Sbjct: 200 GHAPGL 205


>sp|ADEC_METMA|ADENINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 GHKPGL 10
GH PGL
Sbjct: 174 GHAPGL 179


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 5 GHKPGL 10
GH PGL
Sbjct: 233 GHAPGL 238


>sp|ADEC_METAC|ADENINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 GHKPGL 10
GH PGL
Sbjct: 174 GHAPGL 179


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 4 FGHKPG 9
FG KPG
Sbjct: 403 FGRKPG 408


>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 2 KGFGHKPGL 10
KG G PG+
Sbjct: 384 KGLGASPGI 392


>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KGFGHKPGL 10
KG G PG+
Sbjct: 382 KGLGASPGI 390


>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 KGFGHKPGL 10
KG G PG+
Sbjct: 381 KGLGASPGI 389


>sp|PPSA_ARCFU|PROBABLE phosphoenolpyruvate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 2 KGFGHKPGL 10
KG G PG+
Sbjct: 338 KGLGASPGI 346


>sp|Y1617_METJA|UNCHARACTERIZED protein MJ1617|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FGHKPGL 10
FG+ PGL
Sbjct: 62 FGNSPGL 68


>sp|RS14Z_PICTO|SMALL ribosomal subunit protein uS14|Picrophilus torridus (strain ATCC

Query: 2 KGFGHKPG 9
K FGHK G
Sbjct: 9 KNFGHKEG 16


>sp|COFH_METMJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanoculleus marisnigri (strain

Query: 3 GFGHKPG 9
GF KPG
Sbjct: 78 GFSRKPG 84


>sp|DP2S_PYRFU|DNA polymerase II small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 6 HKPGL 10
HKPGL
Sbjct: 508 HKPGL 512


>sp|SYT_THESM|THREONINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 TKGFGHKP 8
T+GF +KP
Sbjct: 603 TEGFPYKP 610


>sp|SYT_THEON|THREONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 TKGFGHKP 8
T+GF +KP
Sbjct: 605 TEGFPYKP 612


>sp|SYT_THEKO|THREONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 TKGFGHKP 8
T+GF +KP
Sbjct: 604 TEGFPYKP 611


>sp|SYT_THEGJ|THREONINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 TKGFGHKP 8
T+GF +KP
Sbjct: 604 TEGFPYKP 611


>sp|SYT_PYRFU|THREONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TKGFGHKP 8
T+GF +KP
Sbjct: 603 TEGFPYKP 610


>sp|SYT_PYRAB|THREONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 TKGFGHKP 8
T+GF +KP
Sbjct: 603 TEGFPYKP 610


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 1 TKGFGHK 7
++GFGH+
Sbjct: 735 SRGFGHQ 741


>sp|DP2S_PYRAB|DNA polymerase II small subunit|Pyrococcus abyssi (strain GE5 /

Query: 6 HKPGL 10
HKPGL
Sbjct: 514 HKPGL 518


>sp|TRM56_STAMF|TRNA (cytidine(56)-2'-O)-methyltransferase|Staphylothermus marinus

Query: 4 FGHKPG 9
+GH+PG
Sbjct: 8 YGHRPG 13


>sp|MCH_METMJ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 TKGFGHKP 8
T G GH P
Sbjct: 203 TAGIGHAP 210


>sp|DP2S_PYRHO|DNA polymerase II small subunit|Pyrococcus horikoshii (strain ATCC

Query: 6 HKPGL 10
HKPGL
Sbjct: 517 HKPGL 521


>sp|RL22_PYRAB|LARGE ribosomal subunit protein uL22|Pyrococcus abyssi (strain GE5 /

Query: 5 GHKPG 9
GHKPG
Sbjct: 71 GHKPG 75


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 2 KGFGHKPGL 10
KG G PG+
Sbjct: 352 KGIGASPGI 360


>sp|RL22_PYRFU|LARGE ribosomal subunit protein uL22|Pyrococcus furiosus (strain ATCC

Query: 5 GHKPG 9
GHKPG
Sbjct: 71 GHKPG 75


>sp|DNAJ_HALMA|CHAPERONE protein DnaJ|Haloarcula marismortui (strain ATCC 43049

Query: 3 GFGHKPG 9
G GH PG
Sbjct: 163 GAGHPPG 169


>sp|RL22_THEKO|LARGE ribosomal subunit protein uL22|Thermococcus kodakarensis (strain

Query: 5 GHKPG 9
GHKPG
Sbjct: 72 GHKPG 76


>sp|RTCB_PYRAE|TRNA-SPLICING ligase RtcB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 TKGFGHK 7
++GFGH+
Sbjct: 240 SRGFGHQ 246


>sp|RL22_PYRHO|LARGE ribosomal subunit protein uL22|Pyrococcus horikoshii (strain ATCC

Query: 5 GHKPG 9
GHKPG
Sbjct: 71 GHKPG 75


>sp|T1S1_METJA|TYPE I restriction enzyme MjaVII|Methanocaldococcus jannaschii (strain

Query: 1 TKGFGH 6
TKG GH
Sbjct: 208 TKGIGH 213


>sp|MDH_NITMS|MALATE dehydrogenase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 GFGHKPGL 10
G G KPG+
Sbjct: 77 GSGRKPGM 84




88|Sequence|436|445|HKPGLKKHPA

>sp|FTHS_THEAC|FORMATE--TETRAHYDROFOLATE ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PGLKKHPA 10
PGL KHPA
Sbjct: 513 PGLPKHPA 520


>sp|SYG_ARCFU|GLYCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PGLKKHP 9
PG KKHP
Sbjct: 217 PGEKKHP 223


>sp|HCP_METTH|HYDROXYLAMINE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 PGLKKHP 9
PGL+K+P
Sbjct: 161 PGLRKYP 167


>sp|FTHS_THEVO|FORMATE--TETRAHYDROFOLATE ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PGLKKHPA 10
PGL K PA
Sbjct: 513 PGLPKRPA 520


>sp|METK_METS3|S-ADENOSYLMETHIONINE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 KPGLKKHPA 10
KP KHPA
Sbjct: 182 KPFKAKHPA 190


>sp|PPSA_ARCFU|PROBABLE phosphoenolpyruvate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 4 GLKKHP 9
GL+KHP
Sbjct: 495 GLEKHP 500


>sp|DHE2_HALSI|NAD-SPECIFIC glutamate dehydrogenase A|Halobacterium salinarum (Halobacterium

Query: 1 HKPGLKKHP 9
+K GL+ HP
Sbjct: 89 YKGGLRYHP 97


>sp|DEOC_HALLT|DEOXYRIBOSE-PHOSPHATE aldolase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 HKPGLKKHPA 10
H PG+K+ A
Sbjct: 69 HAPGVKRDEA 78


>sp|DHEB_HALSI|GLUTAMATE dehydrogenase B|Halobacterium salinarum (Halobacterium halobium)

Query: 1 HKPGLKKHPA 10
+K GL+ HP
Sbjct: 82 YKGGLRYHPG 91


>sp|DHEB_HALSA|GLUTAMATE dehydrogenase B|Halobacterium salinarum (strain ATCC 700922

Query: 1 HKPGLKKHPA 10
+K GL+ HP
Sbjct: 82 YKGGLRYHPG 91




89|Sequence|441|450|KKHPAAPPGG

>sp|Y2601_AERPE|UNCHARACTERIZED protein APE_2601.1|Aeropyrum pernix (strain ATCC 700893

Query: 3 HPAAPPG 9
HP PPG
Sbjct: 116 HPVKPPG 122


>sp|CAS8B_HALVD|CRISPR-ASSOCIATED protein Cas8b|Haloferax volcanii (strain ATCC 29605

Query: 2 KHPAAPPG 9
KHP A PG
Sbjct: 269 KHPDAQPG 276


>sp|AGLQ_HALVD|ARCHAEAL glycosylation protein Q|Haloferax volcanii (strain ATCC 29605

Query: 3 HPAAPPG 9
HP PPG
Sbjct: 300 HPYNPPG 306


>sp|HMDY_METJA|H(2)-FORMING methylenetetrahydromethanopterin dehydrogenase-related protein

Query: 3 HPAAPPG 9
HPAA PG
Sbjct: 155 HPAAVPG 161


>sp|SYY_METBU|TYROSINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 KKHPAAPPG 9
KKHP+A G
Sbjct: 27 KKHPSAYTG 35


>sp|RS25_AERPE|SMALL ribosomal subunit protein eS25|Aeropyrum pernix (strain ATCC 700893

Query: 1 KKHPAAPPGG 10
KK P APP G
Sbjct: 93 KKVPTAPPRG 102


>sp|SYDND_AERPE|ASPARTATE--TRNA(ASP/ASN) ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 KHPAAPPGG 10
KH A P GG
Sbjct: 401 KHGAPPHGG 409


>sp|CARA_PYRFU|CARBAMOYL phosphate synthase small chain|Pyrococcus furiosus (strain ATCC

Query: 3 HPAAPPG 9
HP A PG
Sbjct: 346 HPEASPG 352


>sp|KORA_METTM|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter marburgensis (strain ATCC

Query: 1 KKHPAAPPG 9
+K P +PPG
Sbjct: 191 RKSPTSPPG 199


>sp|DNAJ_PICTO|CHAPERONE protein DnaJ|Picrophilus torridus (strain ATCC 700027

Query: 1 KKHPAAPPG 9
K HP A PG
Sbjct: 30 KYHPDANPG 38


>sp|CARA_THEAC|CARBAMOYL phosphate synthase small chain|Thermoplasma acidophilum (strain

Query: 3 HPAAPPG 9
HP A PG
Sbjct: 321 HPEASPG 327


>sp|CARA_THEVO|CARBAMOYL phosphate synthase small chain|Thermoplasma volcanium (strain ATCC

Query: 3 HPAAPPG 9
HP A PG
Sbjct: 321 HPEASPG 327




90|Sequence|446|455|APPGGRPFTC

>sp|RFCS_METMA|REPLICATION factor C small subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 APPGGRPF 8
AP GG PF
Sbjct: 105 APMGGAPF 112


>sp|IXTPA_METKA|DITP/XTP pyrophosphatase|Methanopyrus kandleri (strain AV19 /

Query: 3 PGGRPFT 9
PGGRP T
Sbjct: 116 PGGRPVT 122


>sp|RFCS_METAC|REPLICATION factor C small subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 APPGGRPF 8
AP GG PF
Sbjct: 105 APIGGAPF 112


>sp|RFCS_ARCFU|REPLICATION factor C small subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 APPGGRPF 8
AP GG PF
Sbjct: 96 APIGGAPF 103


>sp|GFCR_HALWD|TRANSCRIPTIONAL regulator GfcR|Haloquadratum walsbyi (strain DSM 16790

Query: 4 GGRPFTC 10
GGRP C
Sbjct: 177 GGRPVAC 183


>sp|LIPA_NATPD|LIPOYL synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PPGGRPFT 9
PP GR FT
Sbjct: 15 PPSGRRFT 22


>sp|COFD_METTH|2-PHOSPHO-L-LACTATE transferase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 GGRPFT 9
GGRPF+
Sbjct: 226 GGRPFS 231


>sp|PAN2_METTM|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter marburgensis (strain ATCC

Query: 3 PGGRPFTC 10
P G PF C
Sbjct: 36 PVGYPFVC 43


>sp|PAN2_METTH|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter thermautotrophicus (strain

Query: 3 PGGRPFTC 10
P G PF C
Sbjct: 36 PVGYPFVC 43


>sp|HIS7_METMP|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanococcus maripaludis (strain DSM 14266

Query: 4 GGRPF 8
GGRPF
Sbjct: 108 GGRPF 112


>sp|HIS7_META3|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 GGRPF 8
GGRPF
Sbjct: 108 GGRPF 112


>sp|NEP1_PYRAR|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum arsenaticum (strain

Query: 2 PPGGRPF 8
PP GRP
Sbjct: 122 PPEGRPL 128


>sp|IF6_METBF|TRANSLATION initiation factor 6|Methanosarcina barkeri (strain Fusaro /

Query: 2 PPGGRPFTC 10
P G +P TC
Sbjct: 27 PTGTKPETC 35


>sp|SYC_METBF|CYSTEINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 5 GRPFTC 10
G+PF C
Sbjct: 251 GKPFAC 256


>sp|SYC_METAC|CYSTEINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 GRPFTC 10
G+PF C
Sbjct: 251 GKPFVC 256


>sp|Y1003_ARCFU|UNCHARACTERIZED protein AF_1003|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PGGRPFTC 10
P GR +TC
Sbjct: 106 PPGRIYTC 113


>sp|RNP4_HALSA|RIBONUCLEASE P protein component 4|Halobacterium salinarum (strain ATCC 700922

Query: 2 PPGGRPFTC 10
PP R FTC
Sbjct: 47 PPAFRRFTC 55


>sp|RNP4_HALS3|RIBONUCLEASE P protein component 4|Halobacterium salinarum (strain ATCC 29341

Query: 2 PPGGRPFTC 10
PP R FTC
Sbjct: 47 PPAFRRFTC 55


>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 2 PPGGR 6
PPGGR
Sbjct: 553 PPGGR 557


>sp|NASC_HALMT|PROBABLE molybdenum cofactor guanylyltransferase|Haloferax mediterranei

Query: 1 APPGGRPF 8
AP GGRP
Sbjct: 34 APVGGRPM 41


>sp|URE1_SULTO|UREASE subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GGRPFT 9
GG PFT
Sbjct: 100 GGNPFT 105


>sp|RL7A_PYRAE|LARGE ribosomal subunit protein eL8|Pyrobaculum aerophilum (strain ATCC

Query: 2 PPGGRPF 8
PP G+PF
Sbjct: 14 PPPGKPF 20


>sp|RL7A_PYRNV|LARGE ribosomal subunit protein eL8|Pyrobaculum neutrophilum (strain

Query: 2 PPGGRPF 8
PP G+PF
Sbjct: 14 PPPGKPF 20




91|Sequence|451|460|RPFTCATCGK

>sp|DNAJ_HALSA|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 700922

Query: 1 RPFTCATCG 9
RP +CA CG
Sbjct: 161 RPESCADCG 169


Query: 4 TCATCG 9
TC+TCG
Sbjct: 221 TCSTCG 226


>sp|DNAJ_HALS3|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 29341

Query: 1 RPFTCATCG 9
RP +CA CG
Sbjct: 161 RPESCADCG 169


Query: 4 TCATCG 9
TC+TCG
Sbjct: 221 TCSTCG 226


>sp|TFE_METB6|TRANSCRIPTION factor E|Methanoregula boonei (strain DSM 21154

Query: 3 FTCATCGK 10
FTC CG+
Sbjct: 138 FTCPNCGQ 145


>sp|RPO10_METAR|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanocella arvoryzae (strain DSM

Query: 2 PFTCATCGK 10
P C TCGK
Sbjct: 3 PVRCFTCGK 11


>sp|TFE_CENSY|TRANSCRIPTION factor E|Cenarchaeum symbiosum (strain A)

Query: 3 FTCATCGK 10
F C +CGK
Sbjct: 135 FKCPSCGK 142


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 FTCATCGK 10
F C TCG+
Sbjct: 499 FKCPTCGE 506


>sp|TFE_PYRAB|TRANSCRIPTION factor E|Pyrococcus abyssi (strain GE5 /

Query: 3 FTCATCGK 10
FTC CG+
Sbjct: 134 FTCPICGE 141


>sp|MSRB_METMA|PEPTIDE methionine sulfoxide reductase MsrB|Methanosarcina mazei (strain

Query: 3 FTCATCGK 10
+TCA CG+
Sbjct: 47 YTCAACGQ 54


>sp|TFE_IGNH4|TRANSCRIPTION factor E|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 FTCATCGK 10
FTC CG+
Sbjct: 134 FTCPRCGE 141


>sp|TFE_AERPE|TRANSCRIPTION factor E|Aeropyrum pernix (strain ATCC 700893

Query: 3 FTCATCGK 10
FTC CG+
Sbjct: 147 FTCPRCGE 154


Query: 3 FTCATCG 9
+TC CG
Sbjct: 128 YTCPRCG 134


>sp|RPO10_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrococcus horikoshii (strain ATCC

Query: 2 PFTCATCGK 10
P C TCGK
Sbjct: 4 PVRCFTCGK 12


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 3 FTCATCGK 10
F C CGK
Sbjct: 1031 FRCTACGK 1038


>sp|RPO10_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrococcus furiosus (strain ATCC

Query: 2 PFTCATCGK 10
P C TCGK
Sbjct: 4 PVRCFTCGK 12


>sp|RPO10_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrococcus abyssi (strain GE5 /

Query: 2 PFTCATCGK 10
P C TCGK
Sbjct: 4 PVRCFTCGK 12


>sp|MSRB_METBF|PEPTIDE methionine sulfoxide reductase MsrB|Methanosarcina barkeri

Query: 3 FTCATCGK 10
+TCA CG+
Sbjct: 47 YTCAACGQ 54


>sp|TFE_METTH|TRANSCRIPTION factor E|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 FTCATCG 9
FTC CG
Sbjct: 135 FTCPECG 141


>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 2 PFTCATCG 9
P TC CG
Sbjct: 262 PHTCPECG 269


>sp|TFE_ARCFU|TRANSCRIPTION factor E|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FTCATCG 9
FTC CG
Sbjct: 137 FTCPRCG 143


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 FTCATCGK 10
F+C CG+
Sbjct: 14 FSCPNCGR 21


>sp|THIC1_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 PFTCATCGK 10
P TC CG+
Sbjct: 405 PDTCTMCGE 413


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain

Query: 5 CATCG 9
CATCG
Sbjct: 60 CATCG 64


Query: 4 TCATCGK 10
TC +CG+
Sbjct: 99 TCRSCGR 105


>sp|PYRI_PYRCJ|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum calidifontis

Query: 3 FTCATCGK 10
F CA CG+
Sbjct: 136 FVCAYCGR 143


>sp|Y182_METKA|PUTATIVE ABC transporter ATP-binding protein|Methanopyrus kandleri (strain

Query: 4 TCATCG 9
TCA CG
Sbjct: 9 TCAVCG 14


>sp|RPO10_THEON|DNA-DIRECTED RNA polymerase subunit Rpo10|Thermococcus onnurineus (strain NA1)

Query: 2 PFTCATCGK 10
P C TCGK
Sbjct: 4 PVRCFTCGK 12


>sp|SYK_HALMA|LYSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 PF--TCATCGK 10
PF CA CGK
Sbjct: 193 PFLPQCAECGK 203


>sp|TFE_THEKO|TRANSCRIPTION factor E|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 FTCATCGK 10
F C CGK
Sbjct: 135 FQCPICGK 142


>sp|RPO10_PYRIL|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrobaculum islandicum (strain DSM

Query: 2 PFTCATCGK 10
P C TCGK
Sbjct: 4 PIRCFTCGK 12


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 TCATCGK 10
TC CGK
Sbjct: 19 TCKVCGK 25


>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 3 FTCATCG 9
FTC CG
Sbjct: 444 FTCPHCG 450


>sp|RPO10_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo10|Thermococcus kodakarensis (strain

Query: 2 PFTCATCGK 10
P C TCGK
Sbjct: 4 PVRCFTCGK 12


>sp|DNAJ_THEAC|CHAPERONE protein DnaJ|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 TCATCG 9
TC TCG
Sbjct: 193 TCQTCG 198


>sp|TFRB_METTM|FUMARATE reductase (CoM/CoB) subunit B|Methanothermobacter marburgensis

Query: 3 FTCATCGK 10
+ C TCGK
Sbjct: 187 YCCTTCGK 194


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 CATCG 9
CATCG
Sbjct: 174 CATCG 178


Query: 4 TCATCGK 10
TC CGK
Sbjct: 143 TCPYCGK 149


>sp|RPO10_PYRAR|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrobaculum arsenaticum (strain DSM

Query: 2 PFTCATCGK 10
P C TCGK
Sbjct: 4 PVRCFTCGK 12


>sp|PYRI_PYRAR|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum arsenaticum

Query: 3 FTCATCGK 10
F CA CG+
Sbjct: 136 FVCAYCGR 143


>sp|HMDH_ARCFU|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PFTCATCGK 10
PF CAT K
Sbjct: 269 PFRCATHNK 277


>sp|SYP_METST|PROLINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 TCATCGK 10
TC CGK
Sbjct: 451 TCINCGK 457


>sp|COFE_METMP|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 RPFTCATCG 9
RPF +CG
Sbjct: 159 RPFRKGSCG 167


>sp|COFE_METM7|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C7 /

Query: 1 RPFTCATCG 9
RPF +CG
Sbjct: 159 RPFRKGSCG 167


>sp|COFE_METM6|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C6 /

Query: 1 RPFTCATCG 9
RPF +CG
Sbjct: 159 RPFRKGSCG 167


>sp|RPO10_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrobaculum aerophilum (strain ATCC

Query: 2 PFTCATCGK 10
P C TCGK
Sbjct: 4 PIRCFTCGK 12


>sp|RF1_METTH|PEPTIDE chain release factor subunit|Methanothermobacter thermautotrophicus

Query: 3 FTCATCG 9
+ CA+CG
Sbjct: 327 YECASCG 333


>sp|TFE_THEPD|TRANSCRIPTION factor E|Thermofilum pendens (strain DSM 2475

Query: 3 FTCATCGK 10
+TC CG+
Sbjct: 132 YTCEVCGE 139


>sp|PYRI_PYRAE|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum aerophilum

Query: 3 FTCATCGK 10
F CA CG+
Sbjct: 136 FICAYCGR 143


>sp|Y675_METJA|UNCHARACTERIZED protein MJ0675|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RPFTCATCGK 10
R + C CGK
Sbjct: 348 RYYKCLKCGK 357


>sp|RPO10_PYRCJ|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrobaculum calidifontis (strain DSM

Query: 2 PFTCATCGK 10
P C TCGK
Sbjct: 4 PVRCFTCGK 12


>sp|PYRI_PYRIL|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum islandicum

Query: 3 FTCATCGK 10
F CA CG+
Sbjct: 136 FICAYCGR 143


>sp|DNAJ_THEVO|CHAPERONE protein DnaJ|Thermoplasma volcanium (strain ATCC 51530

Query: 4 TCATCG 9
TC TCG
Sbjct: 193 TCNTCG 198


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 CATCGK 10
C++CGK
Sbjct: 21 CSSCGK 26


>sp|RPO2C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanococcus vannielii (strain ATCC

Query: 3 FTCATCGK 10
+ CA CG+
Sbjct: 545 YVCAKCGE 552


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 3 FTCATCGK 10
F C CGK
Sbjct: 650 FRCPRCGK 657


>sp|RF1_THEVO|PEPTIDE chain release factor subunit|Thermoplasma volcanium (strain ATCC

Query: 3 FTCATCGK 10
+ C TCG+
Sbjct: 331 YKCPTCGE 338


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 TCATCGK 10
+CA CG+
Sbjct: 32 SCAKCGR 38


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 FTCATCGK 10
+ C +CGK
Sbjct: 655 YRCMSCGK 662


>sp|DNAJ_METTH|CHAPERONE protein DnaJ|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 TCATCG 9
TC TCG
Sbjct: 164 TCQTCG 169


>sp|RPO10_METMJ|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanoculleus marisnigri (strain

Query: 2 PFTCATCGK 10
P C TCGK
Sbjct: 3 PVRCFTCGK 11


>sp|SPH3_HALVD|SMC-LIKE protein Sph3|Haloferax volcanii (strain ATCC 29605

Query: 4 TCATCG 9
TC TCG
Sbjct: 328 TCWTCG 333


>sp|Y1067_METMP|UNCHARACTERIZED iron-sulfur protein MMP1067|Methanococcus maripaludis (strain DSM

Query: 3 FTCATCGK 10
+ C TCG+
Sbjct: 187 YNCTTCGR 194


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 RPFTCATCG 9
R + C +CG
Sbjct: 14 RKYECRSCG 22


>sp|RL34_STAMF|LARGE ribosomal subunit protein eL34|Staphylothermus marinus (strain

Query: 2 PFTCATCGK 10
P CA CGK
Sbjct: 34 PARCAICGK 42


>sp|RS27_METBF|SMALL ribosomal subunit protein eS27|Methanosarcina barkeri (strain

Query: 1 RPFTCATCGK 10
R TC CG+
Sbjct: 32 RKITCVVCGR 41


>sp|RPO10_METPE|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanosphaerula palustris (strain

Query: 2 PFTCATCGK 10
P C TCGK
Sbjct: 3 PVRCFTCGK 11


>sp|Y1303_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ1303|Methanocaldococcus jannaschii

Query: 1 RPFTCATCGK 10
+ F+C TCG+
Sbjct: 46 KSFSCLTCGE 55


>sp|RS27_METMA|SMALL ribosomal subunit protein eS27|Methanosarcina mazei (strain ATCC

Query: 1 RPFTCATCGK 10
R TC CG+
Sbjct: 32 RKITCVVCGR 41


>sp|RS27_METAC|SMALL ribosomal subunit protein eS27|Methanosarcina acetivorans (strain

Query: 1 RPFTCATCGK 10
R TC CG+
Sbjct: 32 RKITCVVCGR 41


>sp|RPO10_METLZ|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanocorpusculum labreanum (strain

Query: 2 PFTCATCGK 10
P C TCGK
Sbjct: 3 PVRCFTCGK 11


>sp|RPO10_METHJ|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanospirillum hungatei JF-1

Query: 2 PFTCATCGK 10
P C TCGK
Sbjct: 3 PVRCFTCGK 11


>sp|CS12F_MICX1|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f2|Micrarchaeota archaeon (strain

Query: 4 TCATCG 9
TC++CG
Sbjct: 486 TCSSCG 491


>sp|RPO10_METBU|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanococcoides burtonii (strain

Query: 2 PFTCATCGK 10
P C TCGK
Sbjct: 3 PVRCFTCGK 11


>sp|RPO10_METKA|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanopyrus kandleri (strain AV19 /

Query: 2 PFTCATCGK 10
P C TCG+
Sbjct: 4 PIRCFTCGR 12


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 CATCGK 10
CA CG+
Sbjct: 461 CAVCGR 466


>sp|RPO10_METB6|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanoregula boonei (strain DSM

Query: 2 PFTCATCGK 10
P C TCGK
Sbjct: 3 PVRCFTCGK 11


>sp|PUS10_THEAM|TRNA pseudouridine synthase Pus10|Thermosphaera aggregans (strain DSM

Query: 2 PFTCATCG 9
P TC CG
Sbjct: 100 PKTCFICG 107


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 4 TCATCGK 10
TC CG+
Sbjct: 21 TCPVCGR 27


>sp|RAD50_SACS2|DNA double-strand break repair Rad50|Saccharolobus solfataricus (strain

Query: 4 TCATCGK 10
TC CG+
Sbjct: 425 TCPVCGR 431


>sp|RAD50_ARCFU|DNA double-strand break repair Rad50|Archaeoglobus fulgidus (strain

Query: 4 TCATCGK 10
TC CG+
Sbjct: 436 TCPVCGR 442


>sp|THIC2_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina barkeri (strain Fusaro /

Query: 4 TCATCGK 10
TC+ CG+
Sbjct: 404 TCSMCGE 410


>sp|HYPA_METKA|HYDROGENASE maturation factor HypA|Methanopyrus kandleri (strain AV19 /

Query: 3 FTCATCG 9
F CA CG
Sbjct: 71 FKCAECG 77


>sp|RPO10_CALMQ|DNA-DIRECTED RNA polymerase subunit Rpo10|Caldivirga maquilingensis (strain

Query: 2 PFTCATCGK 10
P C TCG+
Sbjct: 4 PIRCWTCGR 12


>sp|TF2B_IGNH4|TRANSCRIPTION initiation factor IIB|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 FTCATCG 9
+ CA CG
Sbjct: 28 YVCARCG 34


>sp|RPO12_THEON|DNA-DIRECTED RNA polymerase subunit Rpo12|Thermococcus onnurineus (strain NA1)

Query: 3 FTCATCGK 10
+ CA CGK
Sbjct: 6 YRCAKCGK 13


>sp|RPO10_HYPBU|DNA-DIRECTED RNA polymerase subunit Rpo10|Hyperthermus butylicus (strain DSM

Query: 2 PFTCATCGK 10
P C TCG+
Sbjct: 4 PMRCFTCGR 12


>sp|TF2B_METKA|TRANSCRIPTION initiation factor IIB|Methanopyrus kandleri (strain AV19 /

Query: 3 FTCATCG 9
+ CA CG
Sbjct: 32 YVCANCG 38


>sp|RF1_HALSA|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 4 TCATCGK 10
TC+ CG+
Sbjct: 355 TCSDCGE 361


>sp|RF1_HALS3|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 4 TCATCGK 10
TC+ CG+
Sbjct: 355 TCSDCGE 361


>sp|SYP_METTH|PROLINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 TCATCGK 10
TC CG+
Sbjct: 463 TCINCGR 469


>sp|RL34_HYPBU|LARGE ribosomal subunit protein eL34|Hyperthermus butylicus (strain DSM

Query: 2 PFTCATCGK 10
P CA CG+
Sbjct: 34 PARCAICGR 42


>sp|Y119_METJA|UNCHARACTERIZED protein MJ0119|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FTCATCG 9
F C CG
Sbjct: 24 FNCGACG 30


>sp|RPO12_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo12|Thermococcus kodakarensis (strain

Query: 3 FTCATCGK 10
+ CA CGK
Sbjct: 6 YRCAKCGK 13


>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 3 FTCATCGK 10
F+C CG+
Sbjct: 333 FSCVNCGQ 340


>sp|SCAF_METTL|DUF35 domain-containing scaffold protein|Methanothermococcus

Query: 5 CATCGK 10
C TCGK
Sbjct: 20 CKTCGK 25


>sp|RPO10_PYRNV|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrobaculum neutrophilum (strain DSM

Query: 2 PFTCATCGK 10
P C TCG+
Sbjct: 4 PVRCFTCGR 12


>sp|RPO10_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus solfataricus (strain

Query: 2 PFTCATCG 9
P C TCG
Sbjct: 4 PIRCFTCG 11


>sp|TFS_ARCFU|TRANSCRIPTION factor S|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RPFTCATCGK 10
R F C CGK
Sbjct: 88 RFFRCTKCGK 97


>sp|RL44E_PYRAB|LARGE ribosomal subunit protein eL42|Pyrococcus abyssi (strain GE5 /

Query: 3 FTCATCGK 10
F C CGK
Sbjct: 69 FRCTVCGK 76


>sp|RPO10_HALLT|DNA-DIRECTED RNA polymerase subunit Rpo10|Halorubrum lacusprofundi (strain

Query: 2 PFTCATCG 9
P C TCG
Sbjct: 4 PVRCFTCG 11


>sp|FDHB2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 3 FTCATCGK 10
F+C CG+
Sbjct: 327 FSCINCGQ 334


>sp|RL44E_THEKO|LARGE ribosomal subunit protein eL42|Thermococcus kodakarensis (strain

Query: 3 FTCATCGK 10
F C CGK
Sbjct: 69 FRCTVCGK 76


>sp|RPO10_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo10|Sulfurisphaera tokodaii (strain DSM

Query: 2 PFTCATCG 9
P C TCG
Sbjct: 4 PIRCFTCG 11


>sp|RS27A_THEVO|SMALL ribosomal subunit protein eS31|Thermoplasma volcanium (strain

Query: 3 FTCATCG 9
FTC CG
Sbjct: 37 FTCGRCG 43


>sp|RPO10_HALMA|DNA-DIRECTED RNA polymerase subunit Rpo10|Haloarcula marismortui (strain ATCC

Query: 2 PFTCATCG 9
P C TCG
Sbjct: 4 PVRCFTCG 11




92|Sequence|456|465|ATCGKSFQLQ

>sp|HIS5_PICTO|IMIDAZOLE glycerol phosphate synthase subunit|Picrophilus torridus (strain

Query: 2 TCGKSF 7
TCGK+F
Sbjct: 142 TCGKTF 147


>sp|KAD_METBU|ADENYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 2 TCGKSFQLQ 10
TCG+S+ ++
Sbjct: 131 TCGESYHMK 139




93|Sequence|461|470|SFQLQVSLSA

***** No hits found ******


94|Sequence|466|475|VSLSAHQRSC

***** No hits found ******


95|Sequence|471|480|HQRSCGAPDG

>sp|GPMI_NATPD|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 HQRSCGAPDG 10
H RS G PDG
Sbjct: 45 HGRSVGLPDG 54


>sp|IF2B_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 3 RSCGAPD 9
R CG PD
Sbjct: 111 RECGKPD 117


>sp|SYM_IGNH4|METHIONINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 CGAPDG 10
CGAPD
Sbjct: 146 CGAPDA 151


>sp|ASSY_METTH|ARGININOSUCCINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 HQRSCGAP 8
+ RSCG P
Sbjct: 160 YARSCGIP 167


>sp|EF1A_METAR|ELONGATION factor 1-alpha|Methanocella arvoryzae (strain DSM 22066

Query: 5 CGAPDG 10
C APDG
Sbjct: 116 CAAPDG 121


>sp|MFNF_METVA|(4- vannielii

Query: 4 SCGAPDG 10
SC PDG
Sbjct: 97 SCDTPDG 103


>sp|PUR2_METKA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanopyrus kandleri (strain AV19 /

Query: 5 CGAPD 9
CGAPD
Sbjct: 21 CGAPD 25


>sp|RL1_HYPBU|LARGE ribosomal subunit protein uL1|Hyperthermus butylicus (strain DSM

Query: 1 HQRSCGAPDG 10
H R C A DG
Sbjct: 60 HVRICVAADG 69


>sp|Y1272_IGNH4|UPF0179 protein Igni_1272|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 HQRSCGAPDG 10
H R C AP G
Sbjct: 102 HWRDCTAPWG 111


>sp|ASPD_METHJ|L-ASPARTATE dehydrogenase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 RSCGAP 8
R CGAP
Sbjct: 41 RMCGAP 46


>sp|RL37_CENSY|LARGE ribosomal subunit protein eL37|Cenarchaeum symbiosum (strain A)

Query: 4 SCGAPDG 10
SCG PD
Sbjct: 37 SCGFPDA 43




96|Sequence|476|485|GAPDGSGPGT

>sp|TRUD_METTH|PROBABLE tRNA pseudouridine synthase D|Methanothermobacter

Query: 3 PDGSGPGT 10
P GSGP T
Sbjct: 35 PSGSGPNT 42


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 APDGSGPGT 10
AP+ +GPGT
Sbjct: 109 APNPNGPGT 117


>sp|RS10_THEKO|SMALL ribosomal subunit protein uS10|Thermococcus kodakarensis (strain

Query: 2 APDGSGPGT 10
+PDG G T
Sbjct: 52 SPDGEGSAT 60


>sp|RS10_PYRWO|SMALL ribosomal subunit protein uS10|Pyrococcus woesei

Query: 2 APDGSGPGT 10
+PDG G T
Sbjct: 52 SPDGEGSAT 60


>sp|RS10_PYRHO|SMALL ribosomal subunit protein uS10|Pyrococcus horikoshii (strain ATCC

Query: 2 APDGSGPGT 10
+PDG G T
Sbjct: 52 SPDGEGSAT 60


>sp|RS10_PYRFU|SMALL ribosomal subunit protein uS10|Pyrococcus furiosus (strain ATCC

Query: 2 APDGSGPGT 10
+PDG G T
Sbjct: 52 SPDGEGSAT 60


>sp|RS10_PYRAB|SMALL ribosomal subunit protein uS10|Pyrococcus abyssi (strain GE5 /

Query: 2 APDGSGPGT 10
+PDG G T
Sbjct: 52 SPDGEGSAT 60


>sp|RS10_METKA|SMALL ribosomal subunit protein uS10|Methanopyrus kandleri (strain AV19

Query: 2 APDGSGPGT 10
+PDG G T
Sbjct: 53 SPDGEGKAT 61


>sp|SYT_NATPD|THREONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PDGSGPG 9
PD +GPG
Sbjct: 256 PDVTGPG 262


>sp|RS10_THEON|SMALL ribosomal subunit protein uS10|Thermococcus onnurineus (strain

Query: 2 APDGSGPGT 10
+PDG G T
Sbjct: 52 SPDGEGTAT 60


>sp|RS10_THEGJ|SMALL ribosomal subunit protein uS10|Thermococcus gammatolerans (strain

Query: 2 APDGSGPGT 10
+PDG G T
Sbjct: 52 SPDGEGTAT 60


>sp|RS10_METPE|SMALL ribosomal subunit protein uS10|Methanosphaerula palustris (strain

Query: 2 APDGSGPGT 10
+PDG G T
Sbjct: 52 SPDGEGTAT 60


>sp|RS10_METLZ|SMALL ribosomal subunit protein uS10|Methanocorpusculum labreanum

Query: 2 APDGSGPGT 10
+PDG G T
Sbjct: 52 SPDGEGTAT 60


>sp|RS10_METHJ|SMALL ribosomal subunit protein uS10|Methanospirillum hungatei JF-1

Query: 2 APDGSGPGT 10
+PDG G T
Sbjct: 52 SPDGEGTAT 60


>sp|RS10_METB6|SMALL ribosomal subunit protein uS10|Methanoregula boonei (strain DSM

Query: 2 APDGSGPGT 10
+PDG G T
Sbjct: 52 SPDGEGTAT 60


>sp|GLMM_METST|PROBABLE phosphoglucosamine mutase|Methanosphaera stadtmanae (strain ATCC

Query: 3 PDGSGPG 9
PDGS PG
Sbjct: 207 PDGSFPG 213


>sp|RS10_METJA|SMALL ribosomal subunit protein uS10|Methanocaldococcus jannaschii

Query: 2 APDGSGPGT 10
+PDG G T
Sbjct: 52 SPDGEGSST 60


>sp|RS10_METMJ|SMALL ribosomal subunit protein uS10|Methanoculleus marisnigri (strain

Query: 2 APDGSGPGT 10
+PDG G T
Sbjct: 52 SPDGEGTAT 60


>sp|Y685_METJA|UNCHARACTERIZED ATP-binding protein MJ0685|Methanocaldococcus jannaschii (strain

Query: 1 GAPDGSG 7
G P+GSG
Sbjct: 100 GRPEGSG 106


>sp|SYS2_METBF|TYPE-2 serine--tRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GAPDGSG 7
GAP+G G
Sbjct: 39 GAPEGQG 45


>sp|RS10_METTP|SMALL ribosomal subunit protein uS10|Methanothrix thermoacetophila

Query: 2 APDGSGPGT 10
+PDG G T
Sbjct: 52 SPDGEGSAT 60


>sp|GLCDH_HALSA|GLUCOSE 1-dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GAPDGSGPGT 10
G PD + PGT
Sbjct: 101 GQPDMAAPGT 110


>sp|RS10_ARCFU|SMALL ribosomal subunit protein uS10|Archaeoglobus fulgidus (strain

Query: 2 APDGSGPGT 10
APDG G T
Sbjct: 56 APDGEGSET 64


>sp|RS10_THEAC|SMALL ribosomal subunit protein uS10|Thermoplasma acidophilum (strain

Query: 2 APDGSGPGT 10
+PDG G T
Sbjct: 54 SPDGEGTNT 62


>sp|NDK_METHJ|NUCLEOSIDE diphosphate kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PDGSGPGT 10
P G+ PGT
Sbjct: 93 PAGAAPGT 100


>sp|NASA_HALMT|ASSIMILATORY nitrate reductase|Haloferax mediterranei (strain ATCC 33500

Query: 3 PDGSGPG 9
PD SGPG
Sbjct: 379 PDDSGPG 385


>sp|SYT_HALSA|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 PDGSGPG 9
PD +GPG
Sbjct: 256 PDVTGPG 262


>sp|SYT_HALS3|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 PDGSGPG 9
PD +GPG
Sbjct: 256 PDVTGPG 262


>sp|RS10_THEVO|SMALL ribosomal subunit protein uS10|Thermoplasma volcanium (strain

Query: 2 APDGSGPGT 10
+PDG G T
Sbjct: 54 SPDGEGTNT 62


>sp|RS10_METTH|SMALL ribosomal subunit protein uS10|Methanothermobacter

Query: 2 APDGSGPGT 10
+PDG G T
Sbjct: 52 SPDGEGTAT 60


>sp|RS10_METST|SMALL ribosomal subunit protein uS10|Methanosphaera stadtmanae (strain

Query: 2 APDGSGPGT 10
+PDG G T
Sbjct: 52 SPDGEGKAT 60


>sp|KAD_METTP|ADENYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 APDGSGPGT 10
P GSG GT
Sbjct: 7 GPPGSGKGT 15




97|Sequence|481|490|SGPGTGGGGS

>sp|PUR2_METAR|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 GPGTGGGGS 10
GP TGG GS
Sbjct: 222 GPNTGGMGS 230


>sp|PUR2_METST|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GPGTGGGGS 10
GP TGG GS
Sbjct: 225 GPITGGMGS 233


>sp|PMK_SACS2|PHOSPHOMEVALONATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PGTGGGGS 10
PG GGG S
Sbjct: 280 PGAGGGDS 287


>sp|FTSZ_THEAC|CELL division protein FtsZ|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 GTGGGGS 10
G GGGGS
Sbjct: 49 GCGGGGS 55


>sp|MCRD_METBF|METHYL-COENZYME M reductase operon protein|Methanosarcina barkeri (strain Fusaro

Query: 1 SGPGTG 6
+GPGTG
Sbjct: 56 AGPGTG 61


>sp|WECC_METVS|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GPGTGG 7
GPG GG
Sbjct: 254 GPGVGG 259


>sp|WECC_METMP|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GPGTGG 7
GPG GG
Sbjct: 254 GPGVGG 259


>sp|WECC_METM7|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 2 GPGTGG 7
GPG GG
Sbjct: 254 GPGVGG 259


>sp|WECC_METM5|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 2 GPGTGG 7
GPG GG
Sbjct: 254 GPGVGG 259


>sp|WECC_METJA|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GPGTGG 7
GPG GG
Sbjct: 256 GPGVGG 261


>sp|WECC_META3|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GPGTGG 7
GPG GG
Sbjct: 259 GPGVGG 264


>sp|PUR2_METMA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GPGTGGGGS 10
GP TGG GS
Sbjct: 224 GPNTGGMGS 232


>sp|PUR2_METBU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GPGTGGGGS 10
GP TGG GS
Sbjct: 222 GPNTGGMGS 230


>sp|PUR2_METBF|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GPGTGGGGS 10
GP TGG GS
Sbjct: 222 GPNTGGMGS 230


>sp|COFC_METMS|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanohalophilus mahii (strain ATCC 35705

Query: 3 PGTGGG 8
PG GGG
Sbjct: 117 PGKGGG 122


>sp|COFC_METBU|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PGTGGG 8
PG GGG
Sbjct: 117 PGKGGG 122


>sp|PUR2_METAC|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GPGTGGGGS 10
GP TGG GS
Sbjct: 224 GPNTGGMGS 232


>sp|PFDB_METAR|PREFOLDIN subunit beta|Methanocella arvoryzae (strain DSM 22066

Query: 2 GPGTGG 7
GP TGG
Sbjct: 118 GPATGG 123


>sp|TRPD_METM5|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 4 GTGGGGS 10
GTGG GS
Sbjct: 72 GTGGDGS 78


>sp|COFC_METMA|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PGTGGG 8
PG GGG
Sbjct: 117 PGKGGG 122


>sp|COFC_HALWD|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GPGTGGG 8
PG GGG
Sbjct: 215 APGRGGG 221


>sp|COFC_HALUD|2-PHOSPHO-L-LACTATE guanylyltransferase|Halorhabdus utahensis (strain DSM 12940

Query: 2 GPGTGGG 8
PG GGG
Sbjct: 111 APGRGGG 117


>sp|PUR2_METLZ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 GPGTGGGGS 10
GP TGG GS
Sbjct: 220 GPNTGGMGS 228


>sp|COFC_METPS|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocella paludicola (strain DSM 17711

Query: 3 PGTGGG 8
PG GGG
Sbjct: 112 PGRGGG 117


>sp|COFC_METMJ|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PGTGGG 8
PG GGG
Sbjct: 115 PGRGGG 120


>sp|COFC_METAR|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 3 PGTGGG 8
PG GGG
Sbjct: 113 PGRGGG 118


>sp|TRPD_METMP|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 4 GTGGGGS 10
GTGG GS
Sbjct: 72 GTGGDGS 78


>sp|COFC_METLZ|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 PGTGGG 8
PG GGG
Sbjct: 115 PGLGGG 120


>sp|PUR2_THEKO|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GPGTGGGGS 10
GP TGG GS
Sbjct: 221 GPITGGMGS 229


>sp|PUR2_METM6|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C6 /

Query: 2 GPGTGGGGS 10
GP TGG GS
Sbjct: 230 GPITGGMGS 238


>sp|TRPD_PYRAB|ANTHRANILATE phosphoribosyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 4 GTGGGGS 10
GTGG GS
Sbjct: 72 GTGGDGS 78


>sp|TRPD_METM7|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 4 GTGGGGS 10
GTGG GS
Sbjct: 72 GTGGDGS 78


>sp|SRP54_METKA|SIGNAL recognition particle 54 kDa|Methanopyrus kandleri (strain AV19 /

Query: 3 PGTGGG 8
PG GGG
Sbjct: 349 PGMGGG 354


>sp|PUR2_PYRFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GPGTGGGGS 10
GP TGG GS
Sbjct: 223 GPITGGMGS 231


>sp|PUR2_METMP|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GPGTGGGGS 10
GP TGG GS
Sbjct: 230 GPITGGMGS 238


>sp|PUR2_METMJ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GPGTGGGGS 10
GP TGG GS
Sbjct: 221 GPNTGGMGS 229


>sp|PUR2_METM7|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C7 /

Query: 2 GPGTGGGGS 10
GP TGG GS
Sbjct: 230 GPITGGMGS 238


>sp|PUR2_METM5|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C5 /

Query: 2 GPGTGGGGS 10
GP TGG GS
Sbjct: 230 GPITGGMGS 238


>sp|PUR2_METB6|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanoregula boonei (strain DSM 21154

Query: 1 SGPGTGGGGS 10
+GP TGG GS
Sbjct: 218 TGPNTGGMGS 227


>sp|COFC_METHJ|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GPGTGGG 8
PG GGG
Sbjct: 121 APGRGGG 127


>sp|COFC_HALVD|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 SGPGTGGG 8
+ PG GGG
Sbjct: 111 AAPGLGGG 118


>sp|PUR2_METTH|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GPGTGGGGS 10
GP TGG GS
Sbjct: 224 GPITGGMGS 232


>sp|TRPD_METVS|ANTHRANILATE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 4 GTGGGGS 10
GTGG GS
Sbjct: 72 GTGGDGS 78


>sp|MVK_METJA|MEVALONATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GTGGGG 9
G GGGG
Sbjct: 275 GAGGGG 280


>sp|TRPD_METM6|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 4 GTGGGGS 10
GTGG GS
Sbjct: 72 GTGGDGS 78


>sp|PUR2_METVS|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GPGTGGGGS 10
GP TGG GS
Sbjct: 230 GPITGGMGS 238


>sp|COFC_METBF|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PGTGGG 8
PG GGG
Sbjct: 117 PGKGGG 122


>sp|PYRH_SULAC|URIDYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 TGGGGS 10
TGGGG+
Sbjct: 41 TGGGGT 46


>sp|COFC_METAC|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PGTGGG 8
PG GGG
Sbjct: 117 PGKGGG 122


>sp|COFC_HALMD|2-PHOSPHO-L-LACTATE guanylyltransferase|Halomicrobium mukohataei (strain ATCC 700874

Query: 2 GPGTGGG 8
PG GGG
Sbjct: 111 APGRGGG 117


>sp|PUR2_PYRAB|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 GPGTGGGGS 10
GP TGG GS
Sbjct: 222 GPITGGMGS 230


>sp|COFC_HALSA|2-PHOSPHO-L-LACTATE guanylyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GPGTGGG 8
PG+GGG
Sbjct: 114 APGSGGG 120


>sp|COFC_HALS3|2-PHOSPHO-L-LACTATE guanylyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 2 GPGTGGG 8
PG+GGG
Sbjct: 114 APGSGGG 120


>sp|COFC_METPE|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosphaerula palustris (strain ATCC

Query: 3 PGTGGG 8
PG GGG
Sbjct: 115 PGRGGG 120




98|Sequence|486|495|GGGGSGSGGG

>sp|COXX_SULTO|PROTOHEME IX farnesyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GGGSGSGGG 10
GG SGGG
Sbjct: 65 GGSLASGGG 73


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 GGGGSGS 7
GGG SGS
Sbjct: 294 GGGDSGS 300


>sp|RRP4_THEAM|EXOSOME complex component Rrp4|Thermosphaera aggregans (strain DSM 11486

Query: 1 GGGGSG 6
GGGGSG
Sbjct: 238 GGGGSG 243


>sp|GLCU_SACS2|GLUCOSE import system permease protein|Saccharolobus solfataricus (strain

Query: 1 GGGGSG 6
GGGG G
Sbjct: 281 GGGGKG 286




99|Sequence|491|500|GSGGGGGGSG

>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 SGGGGG 7
SGGGGG
Sbjct: 887 SGGGGG 892


Query: 4 GGGGG 8
GGGGG
Sbjct: 888 GGGGG 892


>sp|MVK_METJA|MEVALONATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SGGGGGG 8
+G GGGG
Sbjct: 274 TGAGGGG 280


Query: 1 GSGGGG 6
G+GGGG
Sbjct: 275 GAGGGG 280


>sp|Y1038_PYRHO|PROBABLE ABC transporter permease protein|Pyrococcus horikoshii (strain ATCC

Query: 1 GSGGGGGGS 9
+GGG GG+
Sbjct: 239 ATGGGPGGA 247


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 3 GGGGGG 8
GG GGG
Sbjct: 173 GGAGGG 178


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 3 GGGGGG 8
GG GGG
Sbjct: 175 GGAGGG 180


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 3 GGGGGG 8
GG GGG
Sbjct: 173 GGAGGG 178


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 3 GGGGGG 8
GG GGG
Sbjct: 175 GGAGGG 180


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 3 GGGGGG 8
GG GGG
Sbjct: 175 GGAGGG 180


>sp|SPEE_THEON|POLYAMINE aminopropyltransferase|Thermococcus onnurineus (strain NA1)

Query: 3 GGGGGGS 9
GGG GG+
Sbjct: 88 GGGDGGT 94


>sp|SPEE_THEKO|POLYAMINE aminopropyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 3 GGGGGGS 9
GGG GG+
Sbjct: 88 GGGDGGT 94


>sp|SPEE_PYRFU|POLYAMINE aminopropyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GGGGGGS 9
GGG GG+
Sbjct: 83 GGGDGGT 89


>sp|SPEE_METJA|POLYAMINE aminopropyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 GGGGGGS 9
GGG GG+
Sbjct: 91 GGGDGGT 97


>sp|FPRA_METTM|COENZYME F420H(2) oxidase|Methanothermobacter marburgensis (strain ATCC

Query: 1 GSGGGGGGS 9
GS GG GG+
Sbjct: 350 GSMGGNGGA 358


Query: 3 GGGGGGSG 10
GG GG +G
Sbjct: 353 GGNGGATG 360


>sp|RRP4_THEAM|EXOSOME complex component Rrp4|Thermosphaera aggregans (strain DSM 11486

Query: 5 GGGGSG 10
GGGGSG
Sbjct: 238 GGGGSG 243


>sp|SPEE_KORCO|POLYAMINE aminopropyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 GGGGGGS 9
GGG GG+
Sbjct: 105 GGGDGGA 111


>sp|SPEE_ARCFU|POLYAMINE aminopropyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GGGGGGS 9
GGG GG+
Sbjct: 80 GGGDGGA 86


>sp|GLCU_SACS2|GLUCOSE import system permease protein|Saccharolobus solfataricus (strain

Query: 5 GGGGSG 10
GGGG G
Sbjct: 281 GGGGKG 286


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 3 GGGGGG 8
GG GGG
Sbjct: 175 GGSGGG 180


>sp|FTSZ_THEAC|CELL division protein FtsZ|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GSGGGGGGS 9
G GGGG +
Sbjct: 49 GCGGGGSNT 57


>sp|RECJ2_METJA|EXONUCLEASE RecJ2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GGGGGG 8
GG GGG
Sbjct: 396 GGNGGG 401


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 3 GGGGGG 8
GG GGG
Sbjct: 173 GGAGGG 178


>sp|TOP6B_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GSGGGG 6
G GGGG
Sbjct: 9 GDGGGG 14


>sp|HTR1_HALMA|SENSORY rhodopsin I transducer|Haloarcula marismortui (strain ATCC 43049

Query: 1 GSGGGGGGSG 10
G G G G+G
Sbjct: 346 GQGSGADGNG 355


>sp|Y1625_ARCFU|UNCHARACTERIZED protein AF_1625|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SGGGGGGSG 10
S GG GG G
Sbjct: 375 SSGGLGGQG 383


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 3 GGGGGG 8
GG GGG
Sbjct: 173 GGSGGG 178


>sp|TRPF_METTP|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 GGGGGSG 10
GG GGSG
Sbjct: 132 GGLGGSG 138




100|Sequence|496|505|GGGSGGGSAR

>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 2 GGSGGGSAR 10
GGSGGG AR
Sbjct: 175 GGSGGGVAR 183


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 2 GGSGGGSAR 10
GG+GGG AR
Sbjct: 175 GGAGGGIAR 183


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 2 GGSGGGSAR 10
GG+GGG AR
Sbjct: 175 GGAGGGIAR 183


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 2 GGSGGGSAR 10
GG+GGG AR
Sbjct: 175 GGAGGGIAR 183


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 GGSGGGSAR 10
GGSGGG A+
Sbjct: 856 GGSGGGDAK 864


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 2 GGSGGGSA 9
GGSGGG A
Sbjct: 173 GGSGGGVA 180


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 2 GGSGGGSA 9
GG+GGG A
Sbjct: 173 GGTGGGVA 180


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 2 GGSGGGSA 9
GG+GGG A
Sbjct: 173 GGAGGGVA 180


>sp|Y1038_PYRHO|PROBABLE ABC transporter permease protein|Pyrococcus horikoshii (strain ATCC

Query: 1 GGGSGGGS 8
GGG GG S
Sbjct: 241 GGGPGGAS 248


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 2 GGSGGGSA 9
GG+GGG A
Sbjct: 175 GGTGGGIA 182


>sp|CARB1_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 2 GGSGGGSA 9
GG+GGG A
Sbjct: 172 GGTGGGIA 179


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 2 GGSGGGSA 9
GG+GGG A
Sbjct: 173 GGTGGGVA 180


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 2 GGSGGGSA 9
GG+GGG A
Sbjct: 173 GGAGGGIA 180


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 2 GGSGGGSA 9
GG+GGG A
Sbjct: 173 GGAGGGIA 180


>sp|ALAXL_PYRHO|ALANYL-TRNA editing protein AlaX-L|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GGSGGGS 8
GG GGG+
Sbjct: 369 GGKGGGT 375


>sp|CARB1_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 2 GGSGGGSA 9
GG+GGG A
Sbjct: 173 GGTGGGIA 180


>sp|RECJ2_METJA|EXONUCLEASE RecJ2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GGSGGG 7
GG+GGG
Sbjct: 396 GGNGGG 401


>sp|GATA_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 2 GGSGGGSA 9
GGS GGSA
Sbjct: 142 GGSSGGSA 149


>sp|SPEE_KORCO|POLYAMINE aminopropyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GGGSGGG 7
GGG GG
Sbjct: 105 GGGDGGA 111


>sp|SPEE_ARCFU|POLYAMINE aminopropyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GGGSGGG 7
GGG GG
Sbjct: 80 GGGDGGA 86


>sp|GATA_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 2 GGSGGGSA 9
GGS GGSA
Sbjct: 143 GGSSGGSA 150


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GGSGGGSAR 10
GG+ GG+A+
Sbjct: 840 GGASGGAAK 848


>sp|SPEE_THEON|POLYAMINE aminopropyltransferase|Thermococcus onnurineus (strain NA1)

Query: 1 GGGSGG 6
GGG GG
Sbjct: 88 GGGDGG 93


>sp|SPEE_THEKO|POLYAMINE aminopropyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 GGGSGG 6
GGG GG
Sbjct: 88 GGGDGG 93


>sp|SPEE_PYRFU|POLYAMINE aminopropyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GGGSGG 6
GGG GG
Sbjct: 83 GGGDGG 88


>sp|SPEE_METJA|POLYAMINE aminopropyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GGGSGG 6
GGG GG
Sbjct: 91 GGGDGG 96


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 GGGSGGGSA 9
GG GGSA
Sbjct: 281 GGAKSGGSA 289


>sp|GATA_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 2 GGSGGGSA 9
GGS GGSA
Sbjct: 143 GGSSGGSA 150


>sp|SPEE_PYRAB|POLYAMINE aminopropyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 GGGSGG 6
GGG GG
Sbjct: 81 GGGDGG 86


>sp|GGR_THEVO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GGGSGGGSA 9
GGG GG +A
Sbjct: 10 GGGPGGSTA 18




101|Sequence|501|510|GGSARDGSAL

>sp|SYE_CENSY|GLUTAMATE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 GGSARDGSAL 10
GG AR+G+ L
Sbjct: 20 GGRAREGAVL 29


>sp|GGGPS_METS3|GERANYLGERANYLGLYCERYL phosphate synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GGSARDGSA 9
GG RDG A
Sbjct: 201 GGGIRDGEA 209




102|Sequence|506|515|DGSALRCGEC

>sp|QUEC_THEKO|7-CYANO-7-DEAZAGUANINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DGSALRCGEC 10
DG + CGEC
Sbjct: 203 DGKPIHCGEC 212


>sp|QUEC_PYRFU|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DGSALRCGEC 10
DG + CGEC
Sbjct: 204 DGRPIHCGEC 213


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 2 GSALRCGEC 10
GS+L CG C
Sbjct: 614 GSSLDCGAC 622


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter

Query: 2 GSALRCGEC 10
GS+LRC C
Sbjct: 55 GSSLRCRSC 63


>sp|QUEC_PYRAB|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 DGSALRCGEC 10
DG + CG C
Sbjct: 203 DGKPIHCGRC 212


>sp|QUEC_PYRHO|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DGSALRCGEC 10
DG + CG C
Sbjct: 203 DGKPIHCGRC 212


>sp|SYW_PYRCJ|TRYPTOPHAN--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 ALRCGEC 10
AL CGEC
Sbjct: 332 ALLCGEC 338


>sp|SYW_PYRAR|TRYPTOPHAN--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 ALRCGEC 10
AL CGEC
Sbjct: 332 ALLCGEC 338


>sp|SYW_PYRAE|TRYPTOPHAN--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 ALRCGEC 10
AL CGEC
Sbjct: 332 ALLCGEC 338


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DGSALRCGEC 10
D L CGEC
Sbjct: 496 DRIVLECGEC 505


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 3 SALRCGEC 10
S+L+CG C
Sbjct: 490 SSLQCGAC 497


>sp|COFF_METMP|COENZYME gamma-F420-2:alpha-L-glutamate ligase|Methanococcus maripaludis

Query: 4 ALRCGEC 10
AL+C EC
Sbjct: 227 ALKCSEC 233


>sp|HDRD_METAC|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina acetivorans

Query: 3 SALRCGEC 10
S RCGEC
Sbjct: 23 SCTRCGEC 30


>sp|Y1063_METPE|UPF0173 metal-dependent hydrolase Mpal_1063|Methanosphaerula palustris

Query: 1 DGSALRCGE 9
DG+ + CGE
Sbjct: 105 DGTKIMCGE 113


>sp|HDRD_METMA|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina mazei (strain

Query: 3 SALRCGEC 10
S RCGEC
Sbjct: 23 SCTRCGEC 30


>sp|SYW_PYRHO|TRYPTOPHAN--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 LRCGEC 10
L CGEC
Sbjct: 330 LTCGEC 335


>sp|SYW_PYRAB|TRYPTOPHAN--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 5 LRCGEC 10
L CGEC
Sbjct: 330 LTCGEC 335


>sp|HDRD_METTT|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina thermophila

Query: 3 SALRCGEC 10
+ +RCGEC
Sbjct: 23 ACVRCGEC 30


>sp|SYW_METTH|TRYPTOPHAN--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 LRCGEC 10
L CGEC
Sbjct: 327 LMCGEC 332


>sp|TRPB1_METMA|TRYPTOPHAN synthase beta chain 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GSALRCGE 9
G ALRC E
Sbjct: 265 GKALRCTE 272


>sp|PYRI_METB6|ASPARTATE carbamoyltransferase regulatory chain|Methanoregula boonei (strain

Query: 1 DGSALRCGEC 10
DG LRC C
Sbjct: 143 DGKGLRCLYC 152


>sp|NREA_ARCFU|DNA repair protein NreA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 ALRCGEC 10
++RC EC
Sbjct: 3 SVRCAEC 9


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GSALRCGEC 10
G L+C EC
Sbjct: 725 GFELQCAEC 733


>sp|SYW_PYRFU|TRYPTOPHAN--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 LRCGEC 10
L CGEC
Sbjct: 330 LLCGEC 335


>sp|RF1_METKA|PEPTIDE chain release factor subunit|Methanopyrus kandleri (strain AV19 /

Query: 5 LRCGEC 10
LRC EC
Sbjct: 323 LRCPEC 328


>sp|SYG_METKA|GLYCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 5 LRCGEC 10
LRC EC
Sbjct: 128 LRCPEC 133


>sp|DABA_HALMA|PROBABLE inorganic carbon transporter subunit|Haloarcula marismortui (strain

Query: 3 SALRCGEC 10
S+L CG C
Sbjct: 492 SSLDCGAC 499


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 DGSALRCGEC 10
D L+C EC
Sbjct: 495 DDVVLKCPEC 504


>sp|HDRD_METBF|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina barkeri

Query: 5 LRCGEC 10
+RCGEC
Sbjct: 25 VRCGEC 30


>sp|RNFC_METAC|ION-TRANSLOCATING oxidoreductase complex subunit C|Methanosarcina acetivorans (strain

Query: 3 SALRCGEC 10
+ + CGEC
Sbjct: 407 NCIECGEC 414


>sp|Y578_METJA|UNCHARACTERIZED protein MJ0578|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 LRCGEC 10
+RCG+C
Sbjct: 77 IRCGKC 82


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 6 RCGEC 10
RCGEC
Sbjct: 617 RCGEC 621


>sp|RL44E_HALMA|LARGE ribosomal subunit protein eL42|Haloarcula marismortui (strain

Query: 6 RCGEC 10
RCGEC
Sbjct: 70 RCGEC 74


>sp|CSL4_ARCFU|EXOSOME complex component Csl4|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DGSALRCGEC 10
+G L+C EC
Sbjct: 153 EGDILKCPEC 162




103|Sequence|511|520|RCGECGRCFT

>sp|QUEC_SULAC|7-CYANO-7-DEAZAGUANINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 CGECGRCF 9
CG+CG C+
Sbjct: 436 CGKCGPCY 443


>sp|QUEC_SACS2|7-CYANO-7-DEAZAGUANINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 CGECGRCF 9
CG+CG C+
Sbjct: 437 CGKCGPCY 444


>sp|QUEC2_SULTO|7-CYANO-7-DEAZAGUANINE synthase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 CGECGRCF 9
CG+CG C+
Sbjct: 434 CGKCGPCY 441


>sp|SYK_CENSY|LYSINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 CGECGRCFT 10
CG+CG+ +T
Sbjct: 183 CGQCGKMYT 191


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 RCGECGRCF 9
RC CGR F
Sbjct: 91 RCTSCGRTF 99


>sp|Y1450_METJA|UNCHARACTERIZED protein MJ1450|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RCGECGRC 8
RC +CG C
Sbjct: 118 RCNKCGEC 125


Query: 1 RCGECGR 7
+CGEC R
Sbjct: 121 KCGECAR 127


>sp|SUCD_METS5|SUCCINATE-SEMIALDEHYDE dehydrogenase (acetylating)|Metallosphaera sedula (strain ATCC

Query: 2 CGECGRC 8
CG+CG C
Sbjct: 89 CGKCGNC 95


>sp|FDHD_SACS2|SULFUR carrier protein FdhD|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 CGECGRCF 9
CG CGR F
Sbjct: 105 CGVCGRAF 112


>sp|FDHD_SULTO|SULFUR carrier protein FdhD|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 CGECGRCF 9
CG CGR F
Sbjct: 103 CGVCGRAF 110


>sp|AGLUS_METJA|ARCHAEAL glutamate synthase [NADPH]|Methanocaldococcus jannaschii (strain

Query: 2 CGECGRCFT 10
C CGRC+T
Sbjct: 422 CRVCGRCYT 430


Query: 1 RCGECGRC 8
RCG C RC
Sbjct: 47 RCGACHRC 54


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RCGECGRCFT 10
RC ECG+ T
Sbjct: 172 RCNECGKITT 181


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RCGECGRCFT 10
RC ECG+ T
Sbjct: 168 RCNECGKITT 177


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 1 RCGECGRCFT 10
RC +CGR T
Sbjct: 172 RCDQCGRITT 181


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 RCGECGRCF 9
+C +CG C+
Sbjct: 416 KCADCGSCY 424


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 3 GECGRCFT 10
ECGRC T
Sbjct: 757 AECGRCET 764


>sp|QUEC_THEAC|7-CYANO-7-DEAZAGUANINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 CGECGRCF 9
CGEC C
Sbjct: 198 CGECDSCL 205


>sp|QUEC_METB6|7-CYANO-7-DEAZAGUANINE synthase|Methanoregula boonei (strain DSM 21154

Query: 2 CGECGRC 8
CG+CG C
Sbjct: 191 CGKCGAC 197


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 RCGECGR 7
+C ECGR
Sbjct: 729 QCAECGR 735


>sp|ACDG2_METMA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina mazei

Query: 2 CGECGR 7
CGECG+
Sbjct: 18 CGECGQ 23


>sp|ACDG1_METMA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina mazei

Query: 2 CGECGR 7
CGECG+
Sbjct: 18 CGECGQ 23


>sp|QUEC_THEVO|7-CYANO-7-DEAZAGUANINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 CGECGRC 8
CGEC C
Sbjct: 197 CGECDSC 203


>sp|FDHD_SULAC|SULFUR carrier protein FdhD|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 CGECGRCF 9
CG CGR F
Sbjct: 100 CGICGRGF 107


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 RCGECGRCF 9
+C +CG C+
Sbjct: 416 KCADCGACY 424


>sp|DSRB_ARCFU|SULFITE reductase, dissimilatory-type subunit beta|Archaeoglobus fulgidus

Query: 1 RCGECGRCFT 10
+C CG C+T
Sbjct: 240 KCMYCGNCYT 249


>sp|SYK_AERPE|LYSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 RCGECGR 7
RC CGR
Sbjct: 183 RCARCGR 189


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 CGECGRCFT 10
C ECGR T
Sbjct: 173 CSECGRVNT 181


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 RCGECGRCF 9
RC ECG F
Sbjct: 22 RCPECGEYF 30


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RCGECGRCFT 10
RC +CG FT
Sbjct: 583 RCRDCGYQFT 592


>sp|QUEC_METPE|7-CYANO-7-DEAZAGUANINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 CGECGRC 8
CG CG C
Sbjct: 195 CGVCGSC 201


>sp|QUEC_THEKO|7-CYANO-7-DEAZAGUANINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 CGECGRC 8
CGEC C
Sbjct: 209 CGECESC 215


>sp|QUEC_PYRFU|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CGECGRC 8
CGEC C
Sbjct: 210 CGECESC 216


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 CGECG 6
CGECG
Sbjct: 502 CGECG 506


>sp|ACDG_METAC|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 2 CGECG 6
CGECG
Sbjct: 18 CGECG 22


>sp|ACDG_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit gamma|Archaeoglobus

Query: 2 CGECG 6
CGECG
Sbjct: 18 CGECG 22


>sp|ACDG2_METTE|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 2 CGECG 6
CGECG
Sbjct: 18 CGECG 22


>sp|ACDG1_METTE|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 2 CGECG 6
CGECG
Sbjct: 18 CGECG 22


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 1 RCGECGRC 8
RC CGRC
Sbjct: 445 RCYGCGRC 452


Query: 1 RCGECGRC 8
+C ECG C
Sbjct: 407 QCTECGWC 414


>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 1 RCGECGRC 8
+C CGRC
Sbjct: 450 KCIACGRC 457


>sp|IF2G_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC

Query: 1 RCGECGR 7
RC CGR
Sbjct: 60 RCSNCGR 66


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 4 ECGRC 8
ECGRC
Sbjct: 501 ECGRC 505


Query: 2 CGECG 6
CG CG
Sbjct: 502 CGRCG 506


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RCGECGR 7
+C ECGR
Sbjct: 471 KCPECGR 477


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 RCGECGRCFT 10
RC +CG+ T
Sbjct: 172 RCNQCGKITT 181


>sp|QUEC1_SULTO|7-CYANO-7-DEAZAGUANINE synthase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 CGECGRCF 9
CG+C +C
Sbjct: 174 CGQCSQCL 181


>sp|GUOP_HALLT|GUANOSINE phosphorylase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 RCGECG 6
RCG CG
Sbjct: 87 RCGTCG 92


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 CGECGR 7
C ECGR
Sbjct: 415 CSECGR 420


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 RCGECG 6
RC ECG
Sbjct: 858 RCSECG 863


>sp|SYM_PICTO|METHIONINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 RCGECGR 7
+C ECGR
Sbjct: 156 QCDECGR 162


>sp|SYM_AERPE|METHIONINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 RCGECGR 7
+C ECGR
Sbjct: 155 QCDECGR 161


>sp|Y035_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 4 ECGRCF 9
ECG+C+
Sbjct: 238 ECGKCY 243


>sp|IF2B_METAC|TRANSLATION initiation factor 2 subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 CGECGR 7
C ECGR
Sbjct: 102 CSECGR 107


>sp|TF2B1_THEAC|TRANSCRIPTION initiation factor IIB 1|Thermoplasma acidophilum (strain ATCC

Query: 2 CGECG 6
CGECG
Sbjct: 35 CGECG 39


Query: 1 RCGECG 6
RC ECG
Sbjct: 15 RCPECG 20


>sp|TIAS_THEVO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermoplasma volcanium (strain

Query: 1 RCGECGR 7
RC +CGR
Sbjct: 383 RCPKCGR 389


>sp|TF2B1_THEVO|TRANSCRIPTION initiation factor IIB 1|Thermoplasma volcanium (strain ATCC 51530

Query: 2 CGECG 6
CGECG
Sbjct: 35 CGECG 39


Query: 1 RCGECG 6
RC ECG
Sbjct: 15 RCPECG 20


>sp|IF2B_METMA|TRANSLATION initiation factor 2 subunit|Methanosarcina mazei (strain ATCC

Query: 2 CGECGR 7
C ECGR
Sbjct: 102 CSECGR 107


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RCGECGRCF 9
RC +CG+ F
Sbjct: 22 RCPKCGKHF 30


>sp|IF2B_METLZ|TRANSLATION initiation factor 2 subunit|Methanocorpusculum labreanum (strain

Query: 2 CGECGR 7
C ECGR
Sbjct: 103 CSECGR 108


>sp|QUEC_METBF|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 CGECGRC 8
CGEC C
Sbjct: 203 CGECESC 209


>sp|COFG_METBF|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 RCGECG 6
RCG CG
Sbjct: 18 RCGYCG 23


>sp|COFG_METAC|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RCGECG 6
RCG CG
Sbjct: 12 RCGYCG 17


>sp|RL44E_HALMA|LARGE ribosomal subunit protein eL42|Haloarcula marismortui (strain

Query: 1 RCGECGRCF 9
RCGECG+
Sbjct: 70 RCGECGKAH 78


>sp|SYW_PYRHO|TRYPTOPHAN--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 CGECGR 7
CGEC R
Sbjct: 332 CGECKR 337


>sp|SYW_PYRFU|TRYPTOPHAN--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CGECGR 7
CGEC R
Sbjct: 332 CGECKR 337


>sp|SYW_PYRAB|TRYPTOPHAN--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 CGECGR 7
CGEC R
Sbjct: 332 CGECKR 337


>sp|SYW_METKA|TRYPTOPHAN--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 CGECGR 7
CGEC R
Sbjct: 328 CGECKR 333


>sp|CSL4_ARCFU|EXOSOME complex component Csl4|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RCGECGR 7
+C ECGR
Sbjct: 158 KCPECGR 164


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 RCGECGR 7
RC CGR
Sbjct: 460 RCAVCGR 466


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 RCGECGRCF 9
+C +CG C
Sbjct: 416 KCADCGACL 424


>sp|IF2G_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 RCGECGR 7
RC CGR
Sbjct: 60 RCPNCGR 66


>sp|IF2G_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 RCGECGR 7
RC CGR
Sbjct: 60 RCPNCGR 66


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RCGECGRCFT 10
RC CG+ T
Sbjct: 656 RCMSCGKTIT 665


>sp|CSM3_METJA|CRISPR system Cms endoribonuclease Csm3|Methanocaldococcus jannaschii

Query: 2 CGECGRC 8
CGEC C
Sbjct: 83 CGECEIC 89


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 1 RCGECGRC 8
+C +CG C
Sbjct: 416 KCADCGAC 423


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 RCGECGRC 8
+C +CG C
Sbjct: 416 KCADCGAC 423


>sp|SYM_PYRHO|METHIONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RCGECGR 7
RC CGR
Sbjct: 172 RCALCGR 178


>sp|TRM1_SACS2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus solfataricus

Query: 3 GECGRC 8
GEC RC
Sbjct: 244 GECPRC 249


>sp|TRM1_SACI7|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 GECGRC 8
GEC RC
Sbjct: 244 GECPRC 249


>sp|TRM1_SACI6|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 GECGRC 8
GEC RC
Sbjct: 244 GECPRC 249


>sp|TRM1_SACI4|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 GECGRC 8
GEC RC
Sbjct: 244 GECPRC 249


>sp|TRM1_SACI3|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 GECGRC 8
GEC RC
Sbjct: 244 GECPRC 249


>sp|TRM1_SACI2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 GECGRC 8
GEC RC
Sbjct: 244 GECPRC 249


>sp|TRM1_SACI1|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 GECGRC 8
GEC RC
Sbjct: 244 GECPRC 249


>sp|SYG_THEKO|GLYCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RCGECG 6
RC ECG
Sbjct: 130 RCPECG 135


>sp|SYG_THEGJ|GLYCINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 RCGECG 6
RC ECG
Sbjct: 130 RCPECG 135


>sp|SYG_PYRFU|GLYCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RCGECG 6
RC ECG
Sbjct: 128 RCPECG 133


>sp|SYG_METKA|GLYCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 RCGECG 6
RC ECG
Sbjct: 129 RCPECG 134


Query: 2 CGECGRCF 9
C ECG F
Sbjct: 90 CSECGEFF 97


>sp|RF1_METKA|PEPTIDE chain release factor subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 RCGECG 6
RC ECG
Sbjct: 324 RCPECG 329


>sp|TF2B4_HALSA|TRANSCRIPTION initiation factor IIB 4|Halobacterium salinarum (strain ATCC

Query: 2 CGECG 6
CGECG
Sbjct: 50 CGECG 54


>sp|SYK_HALMA|LYSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 RCGECGR 7
+C ECG+
Sbjct: 197 QCAECGK 203


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 2 CGECGR 7
C ECGR
Sbjct: 100 CRECGR 105


Query: 2 CGECGRC 8
C E GRC
Sbjct: 576 CDEPGRC 582


>sp|SYK_METKA|LYSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 CGECGRCFT 10
C ECGR T
Sbjct: 179 CEECGRIAT 187


>sp|FSR_METJA|COENZYME F420-dependent sulfite reductase|Methanocaldococcus jannaschii

Query: 1 RCGECGRC 8
+C CGRC
Sbjct: 494 KCNGCGRC 501


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 RCGECGR 7
RC CGR
Sbjct: 172 RCAICGR 178


>sp|Y1067_METMP|UNCHARACTERIZED iron-sulfur protein MMP1067|Methanococcus maripaludis (strain DSM

Query: 2 CGECGRC 8
C CGRC
Sbjct: 189 CTTCGRC 195


Query: 1 RCGECGRC 8
+ G+CG C
Sbjct: 47 KAGQCGSC 54


>sp|FDHD_THEAC|SULFUR carrier protein FdhD|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 CGECGR 7
CG CGR
Sbjct: 126 CGICGR 131


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 RCGECGRCFT 10
R G+C RC T
Sbjct: 396 REGQCWRCDT 405


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 2 CGECGRC 8
C CGRC
Sbjct: 449 CYTCGRC 455


>sp|RAD50_THEKO|DNA double-strand break repair Rad50|Thermococcus kodakarensis (strain

Query: 1 RCGECGRCFT 10
RC CGR T
Sbjct: 439 RCPVCGRELT 448


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 RCGECGRCF 9
RC +CG F
Sbjct: 18 RCPKCGEYF 26


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RCGECGRCF 9
RC +CG F
Sbjct: 724 RCRDCGHQF 732


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RCGECGRCF 9
RC +CG F
Sbjct: 722 RCRDCGHQF 730


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RCGECGRCF 9
RC +CG F
Sbjct: 721 RCRDCGHQF 729


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 1 RCGECGRCF 9
RC +CG F
Sbjct: 721 RCRDCGHQF 729


>sp|QUEC_METHJ|7-CYANO-7-DEAZAGUANINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 CGECGRC 8
CG CG C
Sbjct: 195 CGICGSC 201


>sp|NPD_METKA|NAD-DEPENDENT protein deacylase|Methanopyrus kandleri (strain AV19 /

Query: 1 RCGECG 6
RC ECG
Sbjct: 150 RCPECG 155


>sp|Y1349_METJA|UNCHARACTERIZED protein MJ1349|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RCGECGRC 8
RC CG C
Sbjct: 19 RCSGCGAC 26


>sp|RL37A_NANEQ|LARGE ribosomal subunit protein eL43|Nanoarchaeum equitans (strain

Query: 1 RCGECGRCFT 10
RC +CG+ FT
Sbjct: 57 RCKKCGKQFT 66


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 RCGECGRCFT 10
R G C RC T
Sbjct: 394 RYGHCWRCKT 403


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 RCGECGRCFT 10
R G C RC T
Sbjct: 389 RYGHCWRCKT 398


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RCGECGRCFT 10
R G C RC T
Sbjct: 393 RYGHCWRCKT 402


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 RCGECGRCFT 10
R G C RC T
Sbjct: 391 RYGHCWRCKT 400


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 RCGECGRCFT 10
R G C RC T
Sbjct: 409 RYGHCWRCKT 418


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 RCGECGRCFT 10
R G C RC T
Sbjct: 389 RYGHCWRCKT 398


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 RCGECGRCFT 10
R G C RC T
Sbjct: 393 RYGHCWRCKT 402


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 RCGECGRCFT 10
R G C RC T
Sbjct: 393 RYGHCWRCKT 402


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 RCGECGRCFT 10
R G C RC T
Sbjct: 389 RYGHCWRCKT 398


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 RCGECGRCFT 10
R G C RC T
Sbjct: 443 RYGHCWRCKT 452


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RCGECGRCFT 10
R G C RC T
Sbjct: 393 RYGHCWRCKT 402


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RCGECGRCFT 10
R G C RC T
Sbjct: 387 RYGHCWRCKT 396


>sp|IF2B_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 RCGECG 6
RC ECG
Sbjct: 102 RCYECG 107


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 1 RCGECGRCF 9
RC CG+ +
Sbjct: 1032 RCTACGKSY 1040


>sp|IF2B_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 1 RCGECG 6
RC ECG
Sbjct: 102 RCYECG 107


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 2 CGECGRC 8
C CGRC
Sbjct: 248 CTACGRC 254


>sp|SYI_HALWD|ISOLEUCINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 RCGECGRCFT 10
R G C RC T
Sbjct: 392 RYGHCWRCDT 401


>sp|PYRI_ARCFU|ASPARTATE carbamoyltransferase regulatory chain|Archaeoglobus fulgidus

Query: 1 RCGECGR 7
RC CGR
Sbjct: 137 RCHYCGR 143


>sp|TFRB_METTM|FUMARATE reductase (CoM/CoB) subunit B|Methanothermobacter marburgensis

Query: 1 RCGECGRC 8
R G+CG C
Sbjct: 54 RAGQCGSC 61


>sp|RNP4_METS3|RIBONUCLEASE P protein component 4|Methanobrevibacter smithii (strain ATCC

Query: 2 CGECG 6
CGECG
Sbjct: 89 CGECG 93


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 2 CGECGRC 8
C CGRC
Sbjct: 443 CIACGRC 449


>sp|RPO2C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo2C|Archaeoglobus fulgidus (strain ATCC

Query: 2 CGECGRCFT 10
CG CG T
Sbjct: 546 CGNCGHVAT 554


>sp|PRIS_CENSY|DNA primase small subunit PriS|Cenarchaeum symbiosum (strain A)

Query: 1 RCGECGR 7
RC CGR
Sbjct: 113 RCSSCGR 119


>sp|HDRD_METAC|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina acetivorans

Query: 1 RCGEC 5
RCGEC
Sbjct: 26 RCGEC 30


>sp|SYP_PYRAB|PROLINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 RCGECGR 7
RC CGR
Sbjct: 462 RCPVCGR 468


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 1 RCGECG 6
RC +CG
Sbjct: 655 RCADCG 660


>sp|RF1_ARCFU|PEPTIDE chain release factor subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 RCGECGR 7
RC +CG+
Sbjct: 323 RCPKCGK 329


>sp|IF2B_METB6|TRANSLATION initiation factor 2 subunit|Methanoregula boonei (strain DSM 21154

Query: 2 CGECGR 7
C ECG+
Sbjct: 103 CSECGK 108


>sp|HDRD_METBF|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina barkeri

Query: 1 RCGEC 5
RCGEC
Sbjct: 26 RCGEC 30


>sp|SYK_NATPD|LYSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 RCGECG 6
+C ECG
Sbjct: 196 QCAECG 201


>sp|RL44E_PYRFU|LARGE ribosomal subunit protein eL42|Pyrococcus furiosus (strain ATCC

Query: 1 RCGECGRCFT 10
RC ECG+ T
Sbjct: 70 RCTECGKAHT 79


>sp|LONH_THEVO|PUTATIVE lon protease homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RCGECG 6
RC +CG
Sbjct: 129 RCSKCG 134


>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RCGECG 6
RC +CG
Sbjct: 129 RCSKCG 134


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 2 CGECGRC 8
CG CG C
Sbjct: 593 CGGCGAC 599


>sp|IF2B_METMJ|TRANSLATION initiation factor 2 subunit|Methanoculleus marisnigri (strain ATCC

Query: 2 CGECGR 7
C ECG+
Sbjct: 103 CSECGK 108


>sp|HDRD_METTT|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina thermophila

Query: 1 RCGEC 5
RCGEC
Sbjct: 26 RCGEC 30


>sp|RAD50_HALVD|DNA double-strand break repair Rad50|Haloferax volcanii (strain ATCC

Query: 1 RCGECGR 7
+C ECG+
Sbjct: 453 KCPECGQ 459


>sp|RAD50_HALSA|DNA double-strand break repair Rad50|Halobacterium salinarum (strain

Query: 1 RCGECGR 7
+C ECG+
Sbjct: 453 KCPECGQ 459


>sp|Y726_METJA|UNCHARACTERIZED protein MJ0726|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RCGECGRCF 9
+C +CG CF
Sbjct: 196 KCIKCGTCF 204


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RCGECG 6
RC +CG
Sbjct: 505 RCNKCG 510


>sp|HDRD_METMA|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina mazei (strain

Query: 1 RCGEC 5
RCGEC
Sbjct: 26 RCGEC 30


>sp|NADK_HALSA|NAD kinase|Halobacterium salinarum (strain ATCC 700922

Query: 3 GECGR 7
GECGR
Sbjct: 46 GECGR 50


>sp|NADK_HALS3|NAD kinase|Halobacterium salinarum (strain ATCC 29341

Query: 3 GECGR 7
GECGR
Sbjct: 46 GECGR 50


>sp|HDRA2_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 2 CGECGRC 8
CG CG C
Sbjct: 586 CGGCGTC 592


>sp|HYD1G_PYRFU|SULFHYDROGENASE 1 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GECGRC 8
G+CG C
Sbjct: 256 GKCGHC 261


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 1 RCGECGRC 8
RC C RC
Sbjct: 427 RCVGCARC 434


>sp|KAD_METTP|ADENYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 RCGECG 6
+C ECG
Sbjct: 148 KCDECG 153


>sp|MOBB_METJA|PUTATIVE molybdopterin-guanine dinucleotide biosynthesis

Query: 2 CGECG 6
CG CG
Sbjct: 155 CGHCG 159


>sp|RPO2C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 2 CGECG 6
CG CG
Sbjct: 550 CGNCG 554


>sp|RPO2C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 2 CGECG 6
CG CG
Sbjct: 550 CGNCG 554


>sp|YE7B_METJA|UNCHARACTERIZED protein MJ1479.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CGECGRC 8
C CGRC
Sbjct: 49 CERCGRC 55


>sp|FDHD_PICTO|SULFUR carrier protein FdhD|Picrophilus torridus (strain ATCC 700027

Query: 2 CGECGR 7
CG CG+
Sbjct: 105 CGVCGK 110


>sp|TF2B_METTH|TRANSCRIPTION initiation factor IIB|Methanothermobacter thermautotrophicus

Query: 2 CGECG 6
CG+CG
Sbjct: 33 CGKCG 37


>sp|MVHB_METTH|POLYFERREDOXIN protein MvhB|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 RCGECGRCF 9
+C ECG C
Sbjct: 75 KCNECGDCV 83


>sp|MVHB_METTM|POLYFERREDOXIN protein MvhB|Methanothermobacter marburgensis (strain ATCC

Query: 1 RCGECGRCF 9
+C ECG C
Sbjct: 75 KCNECGDCV 83


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 RCGEC 5
+CGEC
Sbjct: 418 KCGEC 422


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 RCGEC 5
+CGEC
Sbjct: 418 KCGEC 422


>sp|TIAS_METAC|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina acetivorans

Query: 1 RCGECGR 7
+C ECG+
Sbjct: 357 KCPECGK 363


>sp|Y578_METJA|UNCHARACTERIZED protein MJ0578|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CGECGRCF 9
C CG+C
Sbjct: 76 CIRCGKCL 83


>sp|NOP10_ARCFU|RIBOSOME biogenesis protein Nop10|Archaeoglobus fulgidus (strain ATCC

Query: 1 RCGECGR 7
+CG+CGR
Sbjct: 7 KCGKCGR 13


>sp|TF2B_METMZ|TRANSCRIPTION initiation factor IIB|Methanosarcina mazei (Methanosarcina

Query: 2 CGECG 6
CG+CG
Sbjct: 60 CGDCG 64


>sp|TF2B_METMA|TRANSCRIPTION initiation factor IIB|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CGECG 6
CG+CG
Sbjct: 60 CGDCG 64


>sp|TF2B_METAC|TRANSCRIPTION initiation factor IIB|Methanosarcina acetivorans (strain ATCC

Query: 2 CGECG 6
CG+CG
Sbjct: 60 CGDCG 64


>sp|QUEC_METKA|7-CYANO-7-DEAZAGUANINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 RCGECGRCF 9
CGEC C+
Sbjct: 202 HCGECEACY 210


>sp|FRHG_METTH|COENZYME F420 hydrogenase subunit gamma|Methanothermobacter

Query: 1 RCGECGRCF 9
RC +CG C+
Sbjct: 209 RCIKCGICY 217




104|Sequence|516|525|GRCFTRPAHL

>sp|SPSS_META3|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GRCFTRPAH 9
G FTRP H
Sbjct: 79 GMDFTRPTH 87


>sp|ATGT_PICTO|TRNA-GUANINE(15) transglycosylase|Picrophilus torridus (strain ATCC 700027

Query: 4 FTRPAHL 10
F+RP HL
Sbjct: 210 FSRPVHL 216


>sp|DADD_METMA|5'-DEOXYADENOSINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 CFTRPAHL 10
CF P+HL
Sbjct: 375 CFDVPSHL 382


>sp|DADD_METBF|5'-DEOXYADENOSINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 3 CFTRPAHL 10
CF P+HL
Sbjct: 375 CFDVPSHL 382


>sp|DADD_METAC|5'-DEOXYADENOSINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 CFTRPAHL 10
CF P+HL
Sbjct: 375 CFDVPSHL 382


>sp|SECD_METP4|PROTEIN-EXPORT membrane protein SecD|Methanolacinia petrolearia (strain DSM 11571

Query: 1 GRCFTRPAH 9
G FTRPA+
Sbjct: 467 GVIFTRPAY 475


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GRCFTRPA 8
G CFTR A
Sbjct: 350 GGCFTREA 357


>sp|SYT_METJA|THREONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RCFTRP 7
RCFT P
Sbjct: 333 RCFTMP 338


>sp|SYT_METB6|THREONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 RCFTRP 7
RCFT P
Sbjct: 334 RCFTMP 339


>sp|SURE_HALMA|5'-NUCLEOTIDASE SurE|Haloarcula marismortui (strain ATCC 43049

Query: 5 TRPAHL 10
TRP+HL
Sbjct: 187 TRPSHL 192




105|Sequence|521|530|RPAHLIRHRM

>sp|NADK_METKA|NAD kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 RPAHLIRHRM 10
RPA +IR+R+
Sbjct: 146 RPAKMIRYRL 155


>sp|Y761_METBF|PUTATIVE nickel insertion protein|Methanosarcina barkeri (strain Fusaro /

Query: 1 RPAHLIR 7
RPAH+I+
Sbjct: 288 RPAHVIK 294


>sp|Y1617_METMA|PUTATIVE nickel insertion protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RPAHLIR 7
RPAH+I+
Sbjct: 288 RPAHIIK 294


>sp|Y429_METAC|PUTATIVE nickel insertion protein|Methanosarcina acetivorans (strain ATCC

Query: 1 RPAHLIR 7
RPAH+I+
Sbjct: 288 RPAHIIK 294


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 2 PAHLIR 7
PAHL+R
Sbjct: 945 PAHLVR 950




106|Sequence|526|535|IRHRMLHTGE

>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 1 IRHRMLHTGE 10
IR+R+++ GE
Sbjct: 896 IRYRVMYNGE 905


>sp|ACKA_METMZ|ACETATE kinase|Methanosarcina mazei (Methanosarcina frisia)

Query: 1 IRHRMLHTGE 10
+ HR++H GE
Sbjct: 88 VGHRVVHGGE 97


>sp|ACKA_METMA|ACETATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IRHRMLHTGE 10
+ HR++H GE
Sbjct: 88 VGHRVVHGGE 97


>sp|ACKA_METTE|ACETATE kinase|Methanosarcina thermophila

Query: 1 IRHRMLHTGE 10
+ HR++H GE
Sbjct: 88 VGHRVVHGGE 97


>sp|ACKA_METBF|ACETATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IRHRMLHTGE 10
+ HR++H GE
Sbjct: 88 VGHRVVHGGE 97


>sp|ACKA_METAC|ACETATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IRHRMLHTGE 10
+ HR++H GE
Sbjct: 88 VGHRVVHGGE 97




107|Sequence|531|540|LHTGERPFPC

>sp|HIS8_SULTO|HISTIDINOL-PHOSPHATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LHTGERPFP 9
LH E PFP
Sbjct: 32 LHLNESPFP 40


>sp|RNP2_THESM|RIBONUCLEASE P protein component 2|Thermococcus sibiricus (strain DSM 12597

Query: 3 TGERPF 8
TGERPF
Sbjct: 24 TGERPF 29


>sp|THIOL_METTL|ACETYL-COA acetyltransferase|Methanothermococcus thermolithotrophicus

Query: 2 HTGERPFPC 10
H G P PC
Sbjct: 70 HAGLNPVPC 78


>sp|FLAJ_METVO|FLAGELLA accessory protein J|Methanococcus voltae

Query: 2 HTGERP 7
HTGE+P
Sbjct: 253 HTGEKP 258


>sp|FLAJ_METJA|FLAGELLA accessory protein J|Methanocaldococcus jannaschii (strain ATCC

Query: 2 HTGERP 7
HTGE+P
Sbjct: 256 HTGEKP 261


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 HTGERPF 8
HTGE PF
Sbjct: 550 HTGEVPF 556


>sp|GATB_META3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus aeolicus (strain ATCC

Query: 2 HTGERPFP 9
H G RP P
Sbjct: 47 HPGARPMP 54


>sp|RS13_THEVO|SMALL ribosomal subunit protein uS13|Thermoplasma volcanium (strain

Query: 4 GERPFP 9
GERP P
Sbjct: 41 GERPIP 46


>sp|SEPS_METBF|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 GERPFPC 10
GE P PC
Sbjct: 396 GEEPSPC 402


>sp|SEPS_METAC|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 GERPFPC 10
GE P PC
Sbjct: 396 GEEPSPC 402


>sp|SEPS_METMA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GERPFPC 10
GE P PC
Sbjct: 396 GEEPSPC 402


>sp|FTTA_LOKSG|TRANSCRIPTION termination factor FttA|Lokiarchaeum sp. (strain GC14_75)

Query: 1 LHTGERPF 8
LH G+ PF
Sbjct: 471 LHQGKNPF 478


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 2 HTGERPFP 9
H G PFP
Sbjct: 41 HMGPTPFP 48


>sp|G6PI_THELI|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus litoralis

Query: 1 LHTGERPF 8
++TG++PF
Sbjct: 140 INTGDKPF 147


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 TGERPF 8
TGE+PF
Sbjct: 508 TGEKPF 513


>sp|DTDA_METPE|D-AMINOACYL-TRNA deacylase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 HTGERPFP 9
HT RP P
Sbjct: 67 HTSRRPVP 74


>sp|RTCB_PYRAE|TRNA-SPLICING ligase RtcB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LHTGERPF 8
+HTG R F
Sbjct: 236 IHTGSRGF 243




108|Sequence|536|545|RPFPCTECEK

>sp|WECC_METJA|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PFPCTECE 9
P PC EC+
Sbjct: 91 PTPCIECD 98


>sp|QUEC_PYRFU|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RPFPCTECE 9
RP C ECE
Sbjct: 206 RPIHCGECE 214


>sp|DTD_METST|D-AMINOACYL-TRNA deacylase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 FPCTECEK 10
+ C ECEK
Sbjct: 108 YCCNECEK 115


>sp|QUEC_THEKO|7-CYANO-7-DEAZAGUANINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RPFPCTECE 9
+P C ECE
Sbjct: 205 KPIHCGECE 213


>sp|THIOL_METTL|ACETYL-COA acetyltransferase|Methanothermococcus thermolithotrophicus

Query: 2 PFPCTECE 9
P PCT E
Sbjct: 75 PVPCTRVE 82


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM 14266

Query: 3 FPCTECEK 10
F C EC+K
Sbjct: 216 FVCPECDK 223


>sp|QUEC_METBF|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 PCTECE 9
PC ECE
Sbjct: 202 PCGECE 207


>sp|RL44E_ARCFU|LARGE ribosomal subunit protein eL42|Archaeoglobus fulgidus (strain

Query: 3 FPCTECEK 10
F CTEC+K
Sbjct: 69 FRCTECKK 76


>sp|PGP_HALMA|PHOSPHOGLYCOLATE phosphatase|Haloarcula marismortui (strain ATCC 43049

Query: 2 PFPCTECE 9
PFP CE
Sbjct: 47 PFPIALCE 54


>sp|TFE_METHJ|TRANSCRIPTION factor E|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 FPCTECE 9
F C ECE
Sbjct: 138 FVCQECE 144


>sp|CSM3_METJA|CRISPR system Cms endoribonuclease Csm3|Methanocaldococcus jannaschii

Query: 2 PFPCTECE 9
P C ECE
Sbjct: 80 PHDCGECE 87


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 PFPCTECEK 10
P P +CEK
Sbjct: 513 PIPIWKCEK 521


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 3 FPCTECE 9
F C ECE
Sbjct: 741 FVCRECE 747


>sp|HIS6_METS3|IMIDAZOLE glycerol phosphate synthase subunit|Methanobrevibacter smithii

Query: 1 RPFPCTECE 9
R PC +C+
Sbjct: 5 RIIPCLDCD 13


>sp|RS17_METMJ|SMALL ribosomal subunit protein uS17|Methanoculleus marisnigri (strain

Query: 2 PFPCTECE 9
P P TECE
Sbjct: 10 PIPETECE 17


>sp|PUS10_METST|TRNA pseudouridine synthase Pus10|Methanosphaera stadtmanae (strain ATCC

Query: 3 FPCTECE 9
+PCT C+
Sbjct: 182 WPCTHCK 188


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 PFPCTECEK 10
P P ECE+
Sbjct: 479 PLPVWECEE 487


>sp|RL44E_METJA|LARGE ribosomal subunit protein eL42|Methanocaldococcus jannaschii

Query: 3 FPCTECEK 10
F CTEC K
Sbjct: 68 FKCTECGK 75


>sp|ACDB1_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 4 PCTEC 8
PCT C
Sbjct: 565 PCTSC 569


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 FPCTECE 9
F CT+C+
Sbjct: 1161 FRCTKCD 1167


>sp|HIS6_METST|IMIDAZOLE glycerol phosphate synthase subunit|Methanosphaera stadtmanae

Query: 1 RPFPCTECE 9
R PC +C+
Sbjct: 5 RIIPCLDCD 13


>sp|RL44E_PYRFU|LARGE ribosomal subunit protein eL42|Pyrococcus furiosus (strain ATCC

Query: 3 FPCTECEK 10
F CTEC K
Sbjct: 69 FRCTECGK 76




109|Sequence|541|550|TECEKRFTER

***** No hits found ******


110|Sequence|546|555|RFTERSKLID

>sp|GSA_PYRAE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 FTERSKLID 10
+T+R KL+D
Sbjct: 39 YTDRGKLVD 47


>sp|GSA_PYRNV|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 FTERSKLID 10
+T+R +L+D
Sbjct: 39 YTDRGRLVD 47


>sp|GSA_PYRIL|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 FTERSKLID 10
+T+R +L+D
Sbjct: 39 YTDRGRLVD 47


>sp|GSA_PYRCJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 FTERSKLID 10
+T+R +L+D
Sbjct: 54 YTDRGRLVD 62


>sp|AGL16_SULAC|ARCHAEAL glycosylation protein 16|Sulfolobus acidocaldarius (strain ATCC

Query: 2 FTERSKLI 9
+TER KLI
Sbjct: 45 YTEREKLI 52


>sp|WTPA_PYRAB|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus abyssi (strain GE5 /

Query: 2 FTERSKLID 10
FTE+SK D
Sbjct: 123 FTEKSKYAD 131


>sp|PGK2_METM7|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C7 /

Query: 1 RFTERSKLID 10
RFT R+K+ D
Sbjct: 238 RFTARAKVSD 247


>sp|PGK2_METM6|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C6 /

Query: 1 RFTERSKLID 10
RFT R+K+ D
Sbjct: 238 RFTARAKVSD 247


>sp|GSA_PYRAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 FTERSKLID 10
+T+R +L+D
Sbjct: 39 YTDRGRLVD 47


>sp|PGK2_METM5|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C5 /

Query: 1 RFTERSKLID 10
RFT R+K+ D
Sbjct: 238 RFTARAKVSD 247


>sp|AATB2_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain

Query: 1 RFTERSKLID 10
RFT +S L+D
Sbjct: 77 RFTGQSPLLD 86




111|Sequence|551|560|SKLIDHYRTH

>sp|PNCB_METAC|NICOTINATE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 2 KLIDHYR 8
++IDHYR
Sbjct: 297 RVIDHYR 303


>sp|Y243_ARCFU|UNCHARACTERIZED protein AF_0243|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 IDHYRTH 10
IDH R H
Sbjct: 45 IDHLRAH 51


>sp|KAD_HALMA|ADENYLATE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 SKLIDHYRTH 10
+ +IDHY H
Sbjct: 179 APVIDHYGDH 188


>sp|KAE1B_METMP|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 SKLIDHYRTH 10
+K+ID Y+T+
Sbjct: 519 NKIIDGYKTY 528


>sp|NTPTH_PYRAB|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrococcus abyssi (strain GE5 /

Query: 2 KLIDHYR 8
KL+D YR
Sbjct: 135 KLVDRYR 141


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 LIDHYRT 9
+ DHYRT
Sbjct: 348 IADHYRT 354


>sp|FBPAP_CENSY|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Cenarchaeum symbiosum (strain A)

Query: 1 SKLIDHY 7
S LIDHY
Sbjct: 37 SLLIDHY 43


>sp|Y2262_NATPD|PUTATIVE heme-binding protein NP_2262A|Natronomonas pharaonis (strain ATCC

Query: 5 DHYRTH 10
DHY TH
Sbjct: 340 DHYDTH 345


>sp|RS15_HALMA|SMALL ribosomal subunit protein uS15|Haloarcula marismortui (strain ATCC

Query: 2 KLIDHYR 8
+LID+YR
Sbjct: 128 RLIDYYR 134


>sp|RS2_METMA|SMALL ribosomal subunit protein uS2|Methanosarcina mazei (strain ATCC

Query: 1 SKLIDHY 7
SKL+ HY
Sbjct: 86 SKLLSHY 92


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 4 IDHYR 8
IDHYR
Sbjct: 763 IDHYR 767


>sp|Y1094_HALWD|PUTATIVE heme-binding protein HQ_1094A|Haloquadratum walsbyi (strain DSM

Query: 5 DHYRTH 10
DHY TH
Sbjct: 386 DHYGTH 391


>sp|SYW_PYRAB|TRYPTOPHAN--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 SKLIDHYRT 9
+KLI+H+ T
Sbjct: 19 NKLIEHFGT 27


>sp|RS2_METAC|SMALL ribosomal subunit protein uS2|Methanosarcina acetivorans (strain

Query: 1 SKLIDHY 7
SKL+ HY
Sbjct: 87 SKLLSHY 93


>sp|NURA_PYRFU|DNA double-strand break repair nuclease|Pyrococcus furiosus (strain

Query: 2 KLIDHYR 8
KL DHYR
Sbjct: 168 KLRDHYR 174




112|Sequence|556|565|HYRTHTGVRP

>sp|PSA_SULTO|PROTEASOME subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YRTHTGVRP 10
Y H GVRP
Sbjct: 125 YTQHGGVRP 133


>sp|PSA_SULAC|PROTEASOME subunit alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YRTHTGVRP 10
Y H GVRP
Sbjct: 125 YTQHGGVRP 133


>sp|PSA_SACS2|PROTEASOME subunit alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YRTHTGVRP 10
Y H GVRP
Sbjct: 125 YTQHGGVRP 133


>sp|PSA_SACI7|PROTEASOME subunit alpha|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 YRTHTGVRP 10
Y H GVRP
Sbjct: 125 YTQHGGVRP 133


>sp|PSA_SACI6|PROTEASOME subunit alpha|Saccharolobus islandicus (strain M.16.4 /

Query: 2 YRTHTGVRP 10
Y H GVRP
Sbjct: 125 YTQHGGVRP 133


>sp|PSA_SACI4|PROTEASOME subunit alpha|Saccharolobus islandicus (strain M.14.25 /

Query: 2 YRTHTGVRP 10
Y H GVRP
Sbjct: 125 YTQHGGVRP 133


>sp|PSA_SACI3|PROTEASOME subunit alpha|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 YRTHTGVRP 10
Y H GVRP
Sbjct: 125 YTQHGGVRP 133


>sp|PSA_SACI2|PROTEASOME subunit alpha|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 YRTHTGVRP 10
Y H GVRP
Sbjct: 125 YTQHGGVRP 133


>sp|PSA_SACI1|PROTEASOME subunit alpha|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 YRTHTGVRP 10
Y H GVRP
Sbjct: 125 YTQHGGVRP 133


>sp|PSA_METTH|PROTEASOME subunit alpha|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 YRTHTGVRP 10
Y H GVRP
Sbjct: 124 YTQHGGVRP 132


>sp|PSA_METS5|PROTEASOME subunit alpha|Metallosphaera sedula (strain ATCC 51363

Query: 2 YRTHTGVRP 10
Y H GVRP
Sbjct: 125 YTQHGGVRP 133


>sp|PSA_METJA|PROTEASOME subunit alpha|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YRTHTGVRP 10
Y H GVRP
Sbjct: 124 YTQHGGVRP 132


>sp|PSA_METKA|PROTEASOME subunit alpha|Methanopyrus kandleri (strain AV19 /

Query: 2 YRTHTGVRP 10
Y H GVRP
Sbjct: 125 YTQHGGVRP 133


>sp|UDP_THEKO|URIDINE phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 YRTHTG 7
YRTHTG
Sbjct: 60 YRTHTG 65


>sp|PSA_AERPE|PROTEASOME subunit alpha|Aeropyrum pernix (strain ATCC 700893

Query: 2 YRTHTGVRP 10
Y H GVRP
Sbjct: 127 YTQHGGVRP 135


>sp|PSB2_SULTO|PROTEASOME subunit beta 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HYRTHTGVRP 10
HY TG+RP
Sbjct: 77 HYNLITGMRP 86


>sp|TRM1_THEKO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus kodakarensis

Query: 1 HYRTHTGVR 9
HY THT R
Sbjct: 319 HYDTHTLAR 327


>sp|SYC_THEVO|CYSTEINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HYRTHTGV 8
HY HTG+
Sbjct: 251 HYWIHTGM 258


>sp|SYC_THEAC|CYSTEINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HYRTHTGV 8
HY HTG+
Sbjct: 251 HYWIHTGM 258


>sp|OFOA2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 3 RTHTGVRP 10
R HT ++P
Sbjct: 597 RAHTSIKP 604


>sp|SYC_THEGJ|CYSTEINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 HYRTHTG 7
HY HTG
Sbjct: 252 HYWMHTG 258


>sp|NADE_AERPE|NH(3)-DEPENDENT NAD(+) synthetase|Aeropyrum pernix (strain ATCC 700893

Query: 1 HYRTHTG 7
HY+ H G
Sbjct: 278 HYKQHAG 284


>sp|SYC_PYRHO|CYSTEINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HYRTHTG 7
HY HTG
Sbjct: 252 HYWLHTG 258




113|Sequence|561|570|TGVRPFTCTV

>sp|RIFK_CALMQ|RIBOFLAVIN kinase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 GVRPFTCTV 10
GV+ F CT+
Sbjct: 176 GVKAFKCTI 184


>sp|DADD_METM6|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C6 /

Query: 1 TGVRPF 6
TG+RPF
Sbjct: 220 TGIRPF 225


>sp|HJC_ARCFU|CROSSOVER junction endodeoxyribonuclease Hjc|Archaeoglobus fulgidus (strain

Query: 1 TGVRPFTC 8
+GV PF C
Sbjct: 29 SGVSPFPC 36


>sp|GGR_METMJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 RPFTCTV 10
RP CTV
Sbjct: 265 RPLACTV 271


>sp|IF6_METBF|TRANSLATION initiation factor 6|Methanosarcina barkeri (strain Fusaro /

Query: 1 TGVRPFTCTV 10
TG +P TC +
Sbjct: 28 TGTKPETCAI 37


>sp|DADD_METMP|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain DSM 14266

Query: 1 TGVRPF 6
TG+RPF
Sbjct: 220 TGMRPF 225


>sp|DADD_METM7|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C7 /

Query: 1 TGVRPF 6
TG+RPF
Sbjct: 220 TGMRPF 225


>sp|DADD_METM5|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C5 /

Query: 1 TGVRPF 6
TG+RPF
Sbjct: 220 TGMRPF 225


>sp|VORA_PYRFU|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus furiosus (strain ATCC

Query: 1 TGVRPFTCT 9
TG R FT T
Sbjct: 75 TGARTFTAT 83


>sp|PORA_METJA|PYRUVATE synthase subunit PorA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 TGVRPFTCT 9
TG R FT T
Sbjct: 75 TGARTFTAT 83


>sp|G6PI_METMP|PROBABLE glucose-6-phosphate isomerase|Methanococcus maripaludis (strain DSM

Query: 2 GVRPFTCT 9
G+ P +CT
Sbjct: 205 GIAPLSCT 212


>sp|DPCKG_METS5|GTP-DEPENDENT dephospho-CoA kinase|Metallosphaera sedula (strain ATCC 51363

Query: 1 TGVRPFTCTV 10
+G+RPF V
Sbjct: 61 SGIRPFLSVV 70


>sp|PORA_PYRHO|PYRUVATE synthase subunit PorA|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GVRPFTCT 9
GVR FT T
Sbjct: 73 GVRTFTAT 80


>sp|PORA_PYRAB|PYRUVATE synthase subunit PorA|Pyrococcus abyssi (strain GE5 /

Query: 2 GVRPFTCT 9
GVR FT T
Sbjct: 73 GVRTFTAT 80


>sp|VORA_PYRHO|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus horikoshii (strain ATCC

Query: 1 TGVRPFTCT 9
TG R FT T
Sbjct: 75 TGARVFTAT 83


>sp|VORA_PYRAB|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus abyssi (strain GE5 /

Query: 1 TGVRPFTCT 9
TG R FT T
Sbjct: 76 TGARVFTAT 84




114|Sequence|566|575|FTCTVCGKSF

>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 1 FTCTVCGKSF 10
F CT CGKS+
Sbjct: 1031 FRCTACGKSY 1040


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 TCTVCGKSF 10
TC VCGK F
Sbjct: 19 TCKVCGKPF 27


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 TCTVCGKSF 10
TC VCG++F
Sbjct: 21 TCPVCGRTF 29


>sp|RL44E_PYRAB|LARGE ribosomal subunit protein eL42|Pyrococcus abyssi (strain GE5 /

Query: 1 FTCTVCGKS 9
F CTVCGK+
Sbjct: 69 FRCTVCGKA 77


>sp|RL44E_THEKO|LARGE ribosomal subunit protein eL42|Thermococcus kodakarensis (strain

Query: 1 FTCTVCGKS 9
F CTVCGK+
Sbjct: 69 FRCTVCGKA 77


>sp|RL44E_AERPE|LARGE ribosomal subunit protein eL42|Aeropyrum pernix (strain ATCC

Query: 2 TCTVCGK 8
TCTVCG+
Sbjct: 70 TCTVCGR 76


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 CTVCGKSF 10
C VCGK F
Sbjct: 20 CKVCGKPF 27


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 CTVCGKSF 10
C VCGK F
Sbjct: 20 CKVCGKPF 27


>sp|FDHD_SULTO|SULFUR carrier protein FdhD|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 TCTVCGKSF 10
+C VCG++F
Sbjct: 102 SCGVCGRAF 110


>sp|FDHD_SACS2|SULFUR carrier protein FdhD|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 TCTVCGKSF 10
+C VCG++F
Sbjct: 104 SCGVCGRAF 112


>sp|TFE_PYRAB|TRANSCRIPTION factor E|Pyrococcus abyssi (strain GE5 /

Query: 1 FTCTVCGK 8
FTC +CG+
Sbjct: 134 FTCPICGE 141


>sp|KITH_THEKO|THYMIDINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 CTVCGK 8
CTVCGK
Sbjct: 150 CTVCGK 155


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 CTVCGKSF 10
CT CG++F
Sbjct: 92 CTSCGRTF 99


>sp|CYAS_METHJ|CYSTEATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 FTCTVCGKSF 10
TC VC K F
Sbjct: 6 LTCPVCNKEF 15


>sp|RL44E_PYRHO|LARGE ribosomal subunit protein eL42|Pyrococcus horikoshii (strain ATCC

Query: 1 FTCTVCGKS 9
F CTVCG++
Sbjct: 69 FVCTVCGRA 77


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 3 CTVCGKSF 10
C+VCG+ F
Sbjct: 33 CSVCGRYF 40


>sp|PYRI_PYRNV|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum neutrophilum

Query: 1 FTCTVCGK 8
F CT CG+
Sbjct: 136 FVCTYCGR 143


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 CTVCGKSF 10
C+ CGK+F
Sbjct: 21 CSSCGKAF 28


>sp|TFE_THEKO|TRANSCRIPTION factor E|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FTCTVCGK 8
F C +CGK
Sbjct: 135 FQCPICGK 142


>sp|TFE_THEPD|TRANSCRIPTION factor E|Thermofilum pendens (strain DSM 2475

Query: 1 FTCTVCGK 8
+TC VCG+
Sbjct: 132 YTCEVCGE 139


>sp|THIC1_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 TCTVCGK 8
TCT+CG+
Sbjct: 407 TCTMCGE 413


>sp|Y182_METKA|PUTATIVE ABC transporter ATP-binding protein|Methanopyrus kandleri (strain

Query: 2 TCTVCGKSF 10
TC VCG S
Sbjct: 9 TCAVCGLSL 17


>sp|Y2357_METMA|UPF0212 protein MM_2357|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TCTVCGKSF 10
+C VCG+ F
Sbjct: 50 SCPVCGEPF 58


>sp|THIC2_METST|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 TCTVCG 7
TCT+CG
Sbjct: 407 TCTMCG 412


>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 CTVCGKS 9
C++CGK+
Sbjct: 173 CSICGKT 179


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FTCTVCGKSF 10
+ C CGK+F
Sbjct: 656 YKCYNCGKTF 665


Query: 2 TCTVCGKSF 10
TC CG F
Sbjct: 671 TCPYCGSVF 679


>sp|TFRB_METTM|FUMARATE reductase (CoM/CoB) subunit B|Methanothermobacter marburgensis

Query: 1 FTCTVCGK 8
+ CT CGK
Sbjct: 187 YCCTTCGK 194


>sp|YI48_METSM|INSERTION element ISM1 uncharacterized 48.3|Methanobrevibacter smithii

Query: 1 FTCTVCGKSF 10
+ C CGK F
Sbjct: 99 YQCKKCGKKF 108


>sp|RAD50_ARCFU|DNA double-strand break repair Rad50|Archaeoglobus fulgidus (strain

Query: 2 TCTVCGKSF 10
TC VCG+
Sbjct: 436 TCPVCGREL 444


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 CTVCGKS 9
C++CGK+
Sbjct: 173 CSICGKA 179


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FTCTVCGKS 9
F+C CG+S
Sbjct: 14 FSCPNCGRS 22


>sp|FDHD_PICTO|SULFUR carrier protein FdhD|Picrophilus torridus (strain ATCC 700027

Query: 2 TCTVCGKS 9
+C VCGK+
Sbjct: 104 SCGVCGKT 111


>sp|RAD50_SACS2|DNA double-strand break repair Rad50|Saccharolobus solfataricus (strain

Query: 2 TCTVCGK 8
TC VCG+
Sbjct: 425 TCPVCGR 431


>sp|SPH1_HALSI|SMC-LIKE protein Sph1|Halobacterium salinarum (Halobacterium halobium)

Query: 1 FTCTVCG 7
F+C VCG
Sbjct: 311 FSCFVCG 317


>sp|SPH1_HALSA|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 700922

Query: 1 FTCTVCG 7
F+C VCG
Sbjct: 311 FSCFVCG 317


>sp|SPH1_HALS3|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 29341

Query: 1 FTCTVCG 7
F+C VCG
Sbjct: 311 FSCFVCG 317


>sp|TRM1_SACI7|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CTVCGKSF 10
C +CG++F
Sbjct: 263 CPICGENF 270


>sp|TRM1_SACI6|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CTVCGKSF 10
C +CG++F
Sbjct: 263 CPICGENF 270


>sp|TRM1_SACI4|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CTVCGKSF 10
C +CG++F
Sbjct: 263 CPICGENF 270


>sp|TRM1_SACI3|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CTVCGKSF 10
C +CG++F
Sbjct: 263 CPICGENF 270


>sp|TRM1_SACI2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CTVCGKSF 10
C +CG++F
Sbjct: 263 CPICGENF 270


>sp|TRM1_SACI1|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CTVCGKSF 10
C +CG++F
Sbjct: 263 CPICGENF 270


>sp|BIOB_CENSY|BIOTIN synthase|Cenarchaeum symbiosum (strain A)

Query: 3 CTVCGKS 9
CT CG+S
Sbjct: 65 CTFCGQS 71


>sp|SYP_THEAC|PROLINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 CTVCGKS 9
C VCGK+
Sbjct: 446 CVVCGKN 452


>sp|SYP_THEVO|PROLINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 CTVCGKS 9
C VCGK+
Sbjct: 446 CIVCGKA 452


>sp|DFX_METTH|DESULFOFERRODOXIN homolog|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 FTCTVCG 7
F C VCG
Sbjct: 8 FRCNVCG 14


>sp|RL44E_PYRFU|LARGE ribosomal subunit protein eL42|Pyrococcus furiosus (strain ATCC

Query: 1 FTCTVCGKS 9
F CT CGK+
Sbjct: 69 FRCTECGKA 77


>sp|BIOB_NITMS|BIOTIN synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 CTVCGKS 9
CT CG+S
Sbjct: 72 CTFCGQS 78


>sp|TFE_PYRHO|TRANSCRIPTION factor E|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FTCTVCGK 8
F C +CG+
Sbjct: 134 FVCPICGE 141


>sp|SYP_METS5|PROLINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 3 CTVCGK 8
C VCGK
Sbjct: 463 CVVCGK 468


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 2 TCTVCGKS 9
TC VCG S
Sbjct: 1728 TCPVCGWS 1735


>sp|RNP4_METLZ|RIBONUCLEASE P protein component 4|Methanocorpusculum labreanum (strain ATCC

Query: 1 FTCTVCG 7
+TC +CG
Sbjct: 86 YTCGICG 92


>sp|TFE_METB6|TRANSCRIPTION factor E|Methanoregula boonei (strain DSM 21154

Query: 1 FTCTVCGK 8
FTC CG+
Sbjct: 138 FTCPNCGQ 145


>sp|RL24E_HYPBU|LARGE ribosomal subunit protein eL24|Hyperthermus butylicus (strain DSM

Query: 2 TCTVCGKSF 10
TCT CG+S
Sbjct: 6 TCTYCGRSI 14


>sp|TIAS_CENSY|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Cenarchaeum symbiosum (strain

Query: 1 FTCTVCGKS 9
F CT CG +
Sbjct: 381 FKCTRCGAA 389


Query: 3 CTVCGKS 9
CT C KS
Sbjct: 365 CTKCSKS 371


>sp|TFE_IGNH4|TRANSCRIPTION factor E|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 FTCTVCGK 8
FTC CG+
Sbjct: 134 FTCPRCGE 141


Query: 1 FTCTVCGKSF 10
F C CG F
Sbjct: 115 FYCPACGLQF 124


>sp|TFE_AERPE|TRANSCRIPTION factor E|Aeropyrum pernix (strain ATCC 700893

Query: 1 FTCTVCGK 8
FTC CG+
Sbjct: 147 FTCPRCGE 154


Query: 1 FTCTVCGKSF 10
+TC CG +
Sbjct: 128 YTCPRCGSKY 137


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 CTVCGKSF 10
C VCG+ F
Sbjct: 23 CRVCGEYF 30


>sp|Y1358_THESM|UPF0212 protein TSIB_1358|Thermococcus sibiricus (strain DSM 12597

Query: 3 CTVCGKSF 10
C VCG F
Sbjct: 52 CPVCGSPF 59


>sp|RS27_METBF|SMALL ribosomal subunit protein eS27|Methanosarcina barkeri (strain

Query: 1 FTCTVCGKSF 10
TC VCG++
Sbjct: 34 ITCVVCGRTL 43


>sp|TFE_PYRFU|TRANSCRIPTION factor E|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FTCTVCGK 8
F C +CG+
Sbjct: 136 FQCPICGE 143


>sp|SYP_METLZ|PROLINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 CTVCGK 8
C VCGK
Sbjct: 461 CIVCGK 466


>sp|TFS_ARCFU|TRANSCRIPTION factor S|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FTCTVCGKSF 10
F CT CGK++
Sbjct: 90 FRCTKCGKTW 99


>sp|RS27_METMA|SMALL ribosomal subunit protein eS27|Methanosarcina mazei (strain ATCC

Query: 1 FTCTVCGKSF 10
TC VCG++
Sbjct: 34 ITCVVCGRTL 43


>sp|RS27_METAC|SMALL ribosomal subunit protein eS27|Methanosarcina acetivorans (strain

Query: 1 FTCTVCGKSF 10
TC VCG++
Sbjct: 34 ITCVVCGRTL 43


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 FTCTVCGKSF 10
F CT C S+
Sbjct: 1204 FRCTKCNTSY 1213


>sp|THIC2_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 TCTVCGK 8
TC++CG+
Sbjct: 404 TCSMCGE 410


>sp|RPO2C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanococcus vannielii (strain ATCC

Query: 3 CTVCGKS 9
C VCG+S
Sbjct: 565 CPVCGES 571


>sp|TRM1_METHJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanospirillum hungatei

Query: 2 TCTVCGKSF 10
TC +CG S
Sbjct: 255 TCPLCGASL 263


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 CTVCGKSF 10
C VCG F
Sbjct: 20 CKVCGSYF 27


>sp|TRM1_HALLT|TRNA (guanine(26)-N(2))-dimethyltransferase|Halorubrum lacusprofundi

Query: 2 TCTVCG 7
TC VCG
Sbjct: 256 TCPVCG 261


>sp|IF2G_META3|TRANSLATION initiation factor 2 subunit|Methanococcus aeolicus (strain ATCC

Query: 2 TCTVCG 7
TC VCG
Sbjct: 72 TCPVCG 77


>sp|KPTA_THEVO|PROBABLE RNA 2'-phosphotransferase|Thermoplasma volcanium (strain ATCC

Query: 3 CTVCGK 8
C VCGK
Sbjct: 16 CPVCGK 21


>sp|KPTA_THEAC|PROBABLE RNA 2'-phosphotransferase|Thermoplasma acidophilum (strain ATCC

Query: 3 CTVCGK 8
C VCGK
Sbjct: 16 CPVCGK 21


>sp|TRM1_SACS2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus solfataricus

Query: 3 CTVCGKSF 10
C VCG+ F
Sbjct: 263 CPVCGEIF 270


>sp|TFE_CENSY|TRANSCRIPTION factor E|Cenarchaeum symbiosum (strain A)

Query: 1 FTCTVCGK 8
F C CGK
Sbjct: 135 FKCPSCGK 142


>sp|GUAAA_METJA|GMP synthase [glutamine-hydrolyzing] subunit A|Methanocaldococcus

Query: 3 CTVCGKSF 10
C VCG F
Sbjct: 180 CKVCGYKF 187


>sp|Y834_PYRAB|UPF0212 protein PYRAB08340|Pyrococcus abyssi (strain GE5 /

Query: 3 CTVCGKSF 10
C VCG F
Sbjct: 52 CPVCGAHF 59


>sp|Y350_THEON|UPF0212 protein TON_0350|Thermococcus onnurineus (strain NA1)

Query: 3 CTVCGKSF 10
C VCG F
Sbjct: 52 CPVCGAHF 59


>sp|Y1486_PYRFU|UPF0212 protein PF1486|Pyrococcus furiosus (strain ATCC 43587

Query: 3 CTVCGKSF 10
C VCG F
Sbjct: 52 CPVCGAHF 59


>sp|Y1344_THEGJ|UPF0212 protein TGAM_1344|Thermococcus gammatolerans (strain DSM 15229

Query: 3 CTVCGKSF 10
C VCG F
Sbjct: 52 CPVCGAHF 59


>sp|Y1312_PYRHO|UPF0212 protein PH1312|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 CTVCGKSF 10
C VCG F
Sbjct: 52 CPVCGAHF 59


>sp|Y1194_THEKO|UPF0212 protein TK1194|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 CTVCGKSF 10
C VCG F
Sbjct: 52 CPVCGAHF 59


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 CTVCG 7
CT+CG
Sbjct: 181 CTICG 185


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 CTVCG 7
CT+CG
Sbjct: 177 CTICG 181


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 CTVCG 7
CT+CG
Sbjct: 181 CTICG 185


>sp|Y012_METJA|TNPB-LIKE protein MJ0012|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TCTVCG 7
TC VCG
Sbjct: 82 TCPVCG 87


>sp|TFE_METTH|TRANSCRIPTION factor E|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 FTCTVCG 7
FTC CG
Sbjct: 135 FTCPECG 141


>sp|SYP_METAR|PROLINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 CTVCGKS 9
C +CGK+
Sbjct: 457 CPICGKA 463


>sp|TFE_ARCFU|TRANSCRIPTION factor E|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FTCTVCG 7
FTC CG
Sbjct: 137 FTCPRCG 143


>sp|RL34_STAMF|LARGE ribosomal subunit protein eL34|Staphylothermus marinus (strain

Query: 3 CTVCGK 8
C +CGK
Sbjct: 37 CAICGK 42


>sp|NOB1_PYRHO|ENDORIBONUCLEASE Nob1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FTCTVCGKSF 10
+ C CG+ F
Sbjct: 129 YVCIGCGRKF 138


>sp|NOB1_PYRAB|ENDORIBONUCLEASE Nob1|Pyrococcus abyssi (strain GE5 /

Query: 1 FTCTVCGKSF 10
+ C CG+ F
Sbjct: 127 YVCIGCGRKF 136


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 FTCTVCGK 8
CT CGK
Sbjct: 153 LVCTECGK 160


>sp|TFE_NANEQ|TRANSCRIPTION factor E|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 FTCTVCGKSF 10
F C CG+ +
Sbjct: 107 FICPKCGRKY 116


>sp|PYRI_PYRCJ|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum calidifontis

Query: 1 FTCTVCGK 8
F C CG+
Sbjct: 136 FVCAYCGR 143


>sp|PYRI_PYRAR|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum arsenaticum

Query: 1 FTCTVCGK 8
F C CG+
Sbjct: 136 FVCAYCGR 143


>sp|AGLUS_METJA|ARCHAEAL glutamate synthase [NADPH]|Methanocaldococcus jannaschii (strain

Query: 3 CTVCGKSF 10
C VCG+ +
Sbjct: 422 CRVCGRCY 429


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 CTVCGKSF 10
C VCG F
Sbjct: 23 CRVCGSYF 30


>sp|SYP_NATPD|PROLINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 TCTVCG 7
TC VCG
Sbjct: 464 TCGVCG 469


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 TCTVCGK 8
TC CGK
Sbjct: 143 TCPYCGK 149


>sp|Y1067_METMP|UNCHARACTERIZED iron-sulfur protein MMP1067|Methanococcus maripaludis (strain DSM

Query: 1 FTCTVCGK 8
+ CT CG+
Sbjct: 187 YNCTTCGR 194


>sp|BPS2_ACIAM|PROTEIN bps2|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 TCTVCG 7
TC VCG
Sbjct: 291 TCYVCG 296


>sp|RL44E_METJA|LARGE ribosomal subunit protein eL42|Methanocaldococcus jannaschii

Query: 1 FTCTVCGK 8
F CT CGK
Sbjct: 68 FKCTECGK 75


>sp|TRM1_METS5|TRNA (guanine(26)-N(2))-dimethyltransferase|Metallosphaera sedula

Query: 1 FTCTVCGKSF 10
+ C CG SF
Sbjct: 242 YECDRCGYSF 251


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 FTCTVCGKSF 10
+ C CG +F
Sbjct: 16 YECRSCGNTF 25


>sp|TRM1_METB6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoregula boonei (strain

Query: 2 TCTVCGK 8
TC CGK
Sbjct: 255 TCPFCGK 261


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 TCTVCG 7
TC +CG
Sbjct: 173 TCKICG 178


>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 1 FTCTVCG 7
FTC CG
Sbjct: 444 FTCPHCG 450


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 3 CTVCGKSF 10
C CG+SF
Sbjct: 1314 CLDCGESF 1321


>sp|SYP_METB6|PROLINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 CTVCGK 8
C +CGK
Sbjct: 462 CIICGK 467


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 2 TCTVCGKS 9
TC CG S
Sbjct: 674 TCPFCGNS 681


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 2 TCTVCGKS 9
TC CG S
Sbjct: 674 TCPFCGNS 681


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 2 TCTVCGKS 9
TC CG S
Sbjct: 674 TCPFCGSS 681


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 2 TCTVCGKS 9
TC CG S
Sbjct: 674 TCPFCGSS 681


>sp|PUS10_METTM|TRNA pseudouridine synthase Pus10|Methanothermobacter marburgensis

Query: 3 CTVCGKSF 10
C VCG F
Sbjct: 55 CLVCGDVF 62


>sp|KPTA_PYRAE|PROBABLE RNA 2'-phosphotransferase|Pyrobaculum aerophilum (strain ATCC

Query: 1 FTCTVCGK 8
+ C VCG+
Sbjct: 5 YKCPVCGQ 12


>sp|Z0758_HALVD|ZINC finger mu-protein HVO_0758|Haloferax volcanii (strain ATCC 29605

Query: 1 FTCTVCGKSF 10
TC+ CG+S
Sbjct: 21 LTCSECGESL 30


>sp|RL37A_NANEQ|LARGE ribosomal subunit protein eL43|Nanoarchaeum equitans (strain

Query: 1 FTCTVCGKSF 10
+ C CGK F
Sbjct: 56 YRCKKCGKQF 65


>sp|PYRI_PYRIL|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum islandicum

Query: 1 FTCTVCGK 8
F C CG+
Sbjct: 136 FICAYCGR 143


>sp|PYRI_PYRAE|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum aerophilum

Query: 1 FTCTVCGK 8
F C CG+
Sbjct: 136 FICAYCGR 143


>sp|NADC_METJA|PROBABLE nicotinate-nucleotide pyrophosphorylase

Query: 3 CTVCGKSF 10
C VCG F
Sbjct: 45 CIVCGIDF 52


>sp|DNAJ_METTH|CHAPERONE protein DnaJ|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 TCTVCGKS 9
TC CG S
Sbjct: 164 TCQTCGGS 171


>sp|TIAS_PYRNV|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrobaculum neutrophilum

Query: 3 CTVCGKSF 10
CT CG S
Sbjct: 340 CTYCGGSL 347


>sp|TFE_PYRAR|TRANSCRIPTION factor E|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 TCTVCG 7
TC +CG
Sbjct: 140 TCPICG 145


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 TCTVCGKS 9
TC CG S
Sbjct: 670 TCPYCGSS 677


>sp|HYPF_METJA|PROBABLE carbamoyltransferase HypF|Methanocaldococcus jannaschii (strain

Query: 3 CTVCGKSF 10
CT CG F
Sbjct: 139 CTNCGPRF 146


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 3 CTVCGK 8
C +CGK
Sbjct: 772 CPICGK 777


>sp|THIC_META3|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 CTVCGK 8
C+VCG+
Sbjct: 408 CSVCGE 413


>sp|TIAS_THEVO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermoplasma volcanium (strain

Query: 1 FTCTVCGKSF 10
F C CG+ +
Sbjct: 382 FRCPKCGRRY 391


>sp|DNAJ_HALSA|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 700922

Query: 2 TCTVCG 7
TC+ CG
Sbjct: 221 TCSTCG 226


>sp|DNAJ_HALS3|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 29341

Query: 2 TCTVCG 7
TC+ CG
Sbjct: 221 TCSTCG 226


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 CTVCGK 8
C VCG+
Sbjct: 461 CAVCGR 466


>sp|SYP_ARCFU|PROLINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CTVCGK 8
C VCG+
Sbjct: 455 CVVCGR 460


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 FTCTVCGK 8
F C CGK
Sbjct: 650 FRCPRCGK 657


>sp|THIC_NATPD|PHOSPHOMETHYLPYRIMIDINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 CTVCGKSF 10
C++CG F
Sbjct: 408 CSMCGVEF 415


>sp|THIC_HALMA|PHOSPHOMETHYLPYRIMIDINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 CTVCGKSF 10
C++CG F
Sbjct: 407 CSMCGVEF 414


>sp|SYP_SULAC|PROLINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 TCTVCGK 8
TC VC K
Sbjct: 465 TCVVCKK 471


>sp|RS27_METMJ|SMALL ribosomal subunit protein eS27|Methanoculleus marisnigri (strain

Query: 3 CTVCGK 8
CTVCG+
Sbjct: 36 CTVCGR 41


>sp|THIC_HALSA|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 CTVCGKSF 10
C++CG F
Sbjct: 408 CSMCGVDF 415


>sp|THIC_HALS3|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 CTVCGKSF 10
C++CG F
Sbjct: 408 CSMCGVDF 415


>sp|RL24E_THESM|LARGE ribosomal subunit protein eL24|Thermococcus sibiricus (strain DSM

Query: 3 CTVCGKSF 10
C+ CGK F
Sbjct: 7 CSYCGKEF 14


>sp|HYPA_METAC|HYDROGENASE maturation factor HypA|Methanosarcina acetivorans (strain ATCC

Query: 3 CTVCGKS 9
C VCGK+
Sbjct: 105 CPVCGKN 111


>sp|RL24E_META3|LARGE ribosomal subunit protein eL24|Methanococcus aeolicus (strain

Query: 2 TCTVCGKSF 10
TC CGKS
Sbjct: 5 TCNFCGKSI 13


>sp|TRM1_NATPD|TRNA (guanine(26)-N(2))-dimethyltransferase|Natronomonas pharaonis

Query: 2 TCTVCGKS 9
TC CG+S
Sbjct: 253 TCPHCGQS 260


>sp|GUAAA_METVS|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus vannielii

Query: 3 CTVCGKSF 10
C VCG F
Sbjct: 180 CKVCGFKF 187


>sp|SYP_METST|PROLINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 TCTVCGK 8
TC CGK
Sbjct: 451 TCINCGK 457


>sp|TFE_METMA|TRANSCRIPTION factor E|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FTCTVCGKSF 10
F C +CG+
Sbjct: 133 FLCPMCGEDL 142


>sp|TFE_METBF|TRANSCRIPTION factor E|Methanosarcina barkeri (strain Fusaro /

Query: 1 FTCTVCGKSF 10
F C +CG+
Sbjct: 133 FLCPMCGEDL 142


>sp|TFE_METAC|TRANSCRIPTION factor E|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FTCTVCGKSF 10
F C +CG+
Sbjct: 136 FLCPMCGEDL 145


>sp|SPSS2_METHJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 TCTVCGKSF 10
TC C K F
Sbjct: 106 TCDTCRKPF 114


>sp|MSRB_METBF|PEPTIDE methionine sulfoxide reductase MsrB|Methanosarcina barkeri

Query: 1 FTCTVCGKSF 10
+TC CG+
Sbjct: 47 YTCAACGQEL 56


>sp|COFG_HALSA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 FTCTVC 6
+TCT C
Sbjct: 55 YTCTYC 60


>sp|COFG_HALS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 FTCTVC 6
+TCT C
Sbjct: 55 YTCTYC 60


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 FTCTVC 6
+TCT C
Sbjct: 52 YTCTYC 57


>sp|MSRB_METMA|PEPTIDE methionine sulfoxide reductase MsrB|Methanosarcina mazei (strain

Query: 1 FTCTVCGKSF 10
+TC CG+
Sbjct: 47 YTCAACGQEL 56


>sp|THIC_SULTO|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 CTVCG 7
CT+CG
Sbjct: 408 CTMCG 412


>sp|THIC_SULAC|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 CTVCG 7
CT+CG
Sbjct: 408 CTMCG 412


>sp|THIC_SACI6|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 CTVCG 7
CT+CG
Sbjct: 408 CTMCG 412


>sp|THIC_SACI4|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 CTVCG 7
CT+CG
Sbjct: 408 CTMCG 412


>sp|THIC_SACI3|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 CTVCG 7
CT+CG
Sbjct: 408 CTMCG 412


>sp|THIC_SACI2|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 CTVCG 7
CT+CG
Sbjct: 408 CTMCG 412


>sp|THIC_PYRAE|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 CTVCG 7
CT+CG
Sbjct: 410 CTMCG 414


>sp|THIC_METPE|PHOSPHOMETHYLPYRIMIDINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 CTVCG 7
CT+CG
Sbjct: 406 CTMCG 410


>sp|THIC_METMJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 CTVCG 7
CT+CG
Sbjct: 406 CTMCG 410


>sp|THIC_METLZ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 CTVCG 7
CT+CG
Sbjct: 407 CTMCG 411


>sp|THIC_METHJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 CTVCG 7
CT+CG
Sbjct: 406 CTMCG 410


>sp|THIC_METB6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoregula boonei (strain DSM 21154

Query: 3 CTVCG 7
CT+CG
Sbjct: 407 CTMCG 411


>sp|THIC2_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 CTVCG 7
CT+CG
Sbjct: 408 CTMCG 412


>sp|THIC2_METMA|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 CTVCG 7
CT+CG
Sbjct: 408 CTMCG 412


>sp|THIC2_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 CTVCG 7
CT+CG
Sbjct: 408 CTMCG 412


>sp|THIC1_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 CTVCG 7
CT+CG
Sbjct: 408 CTMCG 412


>sp|THIC1_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina barkeri (strain Fusaro /

Query: 3 CTVCG 7
CT+CG
Sbjct: 408 CTMCG 412


>sp|RL37A_METKA|LARGE ribosomal subunit protein eL43|Methanopyrus kandleri (strain AV19

Query: 3 CTVCGKSF 10
CT CG F
Sbjct: 56 CTKCGAEF 63


>sp|SPSS2_METB6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanoregula boonei (strain DSM 21154

Query: 2 TCTVCGKSF 10
TC C K F
Sbjct: 106 TCDACRKPF 114


>sp|RL37A_THESM|LARGE ribosomal subunit protein eL43|Thermococcus sibiricus (strain DSM

Query: 2 TCTVCGK 8
TC VCG+
Sbjct: 37 TCPVCGR 43


>sp|RNP4_METMA|RIBONUCLEASE P protein component 4|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TCTVCGK 8
TC CGK
Sbjct: 91 TCEHCGK 97


>sp|RS27_METLZ|SMALL ribosomal subunit protein eS27|Methanocorpusculum labreanum

Query: 3 CTVCGK 8
CTVCG+
Sbjct: 36 CTVCGR 41


>sp|PUS10_THEAM|TRNA pseudouridine synthase Pus10|Thermosphaera aggregans (strain DSM

Query: 2 TCTVCG 7
TC +CG
Sbjct: 102 TCFICG 107


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 2 TCTVCGK 8
+CT CG+
Sbjct: 247 SCTACGR 253


>sp|RASEA_METAC|ARCHAEOSINE synthase subunit beta|Methanosarcina acetivorans (strain ATCC

Query: 3 CTVCG 7
CT+CG
Sbjct: 59 CTMCG 63


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain

Query: 2 TCTVCGKS 9
TC +C KS
Sbjct: 26 TCAMCVKS 33


>sp|HYPA_METBF|HYDROGENASE maturation factor HypA|Methanosarcina barkeri (strain Fusaro /

Query: 3 CTVCGK 8
C VCGK
Sbjct: 105 CPVCGK 110


>sp|ABLA_METMA|L-LYSINE 2,3-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 CTVCGK 8
CT+C K
Sbjct: 380 CTICDK 385


>sp|TFS1_SACS2|TRANSCRIPTION factor S1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FTCTVCGKSF 10
+ CT CGK +
Sbjct: 101 YKCTKCGKVW 110


>sp|SUI1_METTP|PROTEIN translation factor SUI1 homolog|Methanothrix thermoacetophila

Query: 3 CTVCG 7
CTVCG
Sbjct: 6 CTVCG 10


>sp|RL24E_THEVO|LARGE ribosomal subunit protein eL24|Thermoplasma volcanium (strain

Query: 2 TCTVCGKS 9
TC+ CGK+
Sbjct: 5 TCSFCGKT 12


>sp|HYPA_METMA|HYDROGENASE maturation factor HypA|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 CTVCGK 8
C VCGK
Sbjct: 105 CPVCGK 110


>sp|Y092_METJA|UNCHARACTERIZED iron-sulfur protein MJ0092|Methanocaldococcus jannaschii (strain

Query: 1 FTCTVCGK 8
+ CT C K
Sbjct: 184 YNCTTCAK 191


>sp|TFS_SULAC|TRANSCRIPTION factor S|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FTCTVCGKSF 10
+ CT CGK +
Sbjct: 98 YKCTKCGKVW 107


>sp|RL37A_PYRFU|LARGE ribosomal subunit protein eL43|Pyrococcus furiosus (strain ATCC

Query: 1 FTCTVCGK 8
TC VCG+
Sbjct: 36 HTCPVCGR 43


>sp|NOP10_PYRAB|RIBOSOME biogenesis protein Nop10|Pyrococcus abyssi (strain GE5 /

Query: 2 TCTVCGK 8
TC VCG+
Sbjct: 19 TCPVCGE 25


>sp|RS27A_CENSY|SMALL ribosomal subunit protein eS31|Cenarchaeum symbiosum (strain A)

Query: 3 CTVCGKSF 10
C+ CGK F
Sbjct: 27 CSRCGKGF 34


>sp|MTRE_METFE|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanothermus fervidus

Query: 3 CTVCGKS 9
CT CG S
Sbjct: 66 CTFCGVS 72


>sp|RL44E_NATPD|LARGE ribosomal subunit protein eL42|Natronomonas pharaonis (strain

Query: 1 FTCTVCGKSF 10
+ C+ CGK+
Sbjct: 70 YRCSECGKAH 79




115|Sequence|571|580|CGKSFIRKDH

>sp|CDC63_SULTO|ORC1-TYPE DNA replication protein 3|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GKSFIRKDH 10
G+ FIRKDH
Sbjct: 263 GEGFIRKDH 271


>sp|RS21_SACS2|SMALL ribosomal subunit protein aS21|Saccharolobus solfataricus (strain

Query: 1 CGKSFIRKDH 10
CG+ IR+DH
Sbjct: 37 CGEVLIRRDH 46


>sp|AATB1_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GKSFIRKDH 10
GK F R+DH
Sbjct: 355 GKGFTREDH 363


>sp|RL24E_METVS|LARGE ribosomal subunit protein eL24|Methanococcus vannielii (strain

Query: 1 CGKSFIRKD 9
CGK +++KD
Sbjct: 17 CGKKYVKKD 25


>sp|RL24E_METMP|LARGE ribosomal subunit protein eL24|Methanococcus maripaludis (strain

Query: 1 CGKSFIRKD 9
CGK +++KD
Sbjct: 17 CGKKYVKKD 25


>sp|RL24E_METM7|LARGE ribosomal subunit protein eL24|Methanococcus maripaludis (strain

Query: 1 CGKSFIRKD 9
CGK +++KD
Sbjct: 17 CGKKYVKKD 25


>sp|RL24E_METM6|LARGE ribosomal subunit protein eL24|Methanococcus maripaludis (strain

Query: 1 CGKSFIRKD 9
CGK +++KD
Sbjct: 17 CGKKYVKKD 25


>sp|RL24E_METM5|LARGE ribosomal subunit protein eL24|Methanococcus maripaludis (strain

Query: 1 CGKSFIRKD 9
CGK +++KD
Sbjct: 17 CGKKYVKKD 25


>sp|NOB1_METTH|ENDORIBONUCLEASE Nob1|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 CGKSFIRKDH 10
CG +RK H
Sbjct: 160 CGSRIVRKRH 169


>sp|TRUD_PYRNV|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum neutrophilum (strain DSM

Query: 2 GKSFIRKD 9
GK+ +RKD
Sbjct: 188 GKALLRKD 195


>sp|AATB_METLZ|A-TYPE ATP synthase subunit B|Methanocorpusculum labreanum (strain ATCC

Query: 2 GKSFIRKDH 10
GK R+DH
Sbjct: 355 GKGMTREDH 363


>sp|DACZ_METJA|DIADENYLATE cyclase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KSFIRKD 9
KSF++KD
Sbjct: 36 KSFLKKD 42


>sp|Y157_METAC|UPF0251 protein MA_0157|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 CGKSFIRK 8
CG S +RK
Sbjct: 157 CGSSMVRK 164


>sp|RL24E_META3|LARGE ribosomal subunit protein eL24|Methanococcus aeolicus (strain

Query: 2 GKSFIRKD 9
GK F++KD
Sbjct: 18 GKKFVKKD 25




116|Sequence|576|585|IRKDHLRKHQ

>sp|CDC65_HALSA|ORC1-TYPE DNA replication protein 5|Halobacterium salinarum (strain ATCC

Query: 1 IRKDHLRKHQ 10
+R+DH+R+ Q
Sbjct: 281 VREDHVRESQ 290


>sp|RS21_SACS2|SMALL ribosomal subunit protein aS21|Saccharolobus solfataricus (strain

Query: 1 IRKDHLRKHQ 10
IR+DH+ + Q
Sbjct: 42 IRRDHMCRKQ 51


>sp|RLME_NITMS|RIBOSOMAL RNA large subunit methyltransferase|Nitrosopumilus maritimus

Query: 2 RKDHLRK 8
RKDH RK
Sbjct: 7 RKDHYRK 13


>sp|METK_PICTO|S-ADENOSYLMETHIONINE synthase|Picrophilus torridus (strain ATCC 700027

Query: 3 KDHLRKH 9
KD+LR+H
Sbjct: 117 KDYLREH 123


>sp|GCSPB_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 3 KDHLRKHQ 10
KD RKH+
Sbjct: 396 KDRYRKHE 403


>sp|IF2B_METMJ|TRANSLATION initiation factor 2 subunit|Methanoculleus marisnigri (strain

Query: 3 KDHLRKH 9
+DHL KH
Sbjct: 56 QDHLMKH 62


>sp|Y243_ARCFU|UNCHARACTERIZED protein AF_0243|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DHLRKH 9
DHLR H
Sbjct: 46 DHLRAH 51




117|Sequence|581|590|LRKHQRNHAA

>sp|CDC68_HALSA|ORC1-TYPE DNA replication protein 8|Halobacterium salinarum (strain ATCC

Query: 1 LRKHQRNHA 9
LR+H RN+
Sbjct: 359 LRQHDRNYG 367


>sp|NADE_AERPE|NH(3)-DEPENDENT NAD(+) synthetase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LRKHQRNHAA 10
++KH + HA
Sbjct: 275 IKKHYKQHAG 284




118|Sequence|586|595|RNHAAGAKTP

>sp|RL19E_METJA|LARGE ribosomal subunit protein eL19|Methanocaldococcus jannaschii

Query: 4 AAGAKTP 10
AAGA+TP
Sbjct: 86 AAGARTP 92




119|Sequence|591|600|GAKTPARGQP

>sp|Y1404_METJA|UNCHARACTERIZED protein MJ1404|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GAKTPARGQP 10
G K P GQP
Sbjct: 203 GEKVPRMGQP 212


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GAKTPARGQP 10
G P RG+P
Sbjct: 405 GGAVPPRGKP 414


>sp|SYH_PYRAE|HISTIDINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GAKTPARG 8
G KTPA G
Sbjct: 305 GVKTPALG 312


>sp|GATE_CALMQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Caldivirga maquilingensis (strain ATCC

Query: 1 GAKTPARGQP 10
GAKT +G P
Sbjct: 235 GAKTEVKGVP 244


>sp|PRIL_METAR|DNA primase large subunit PriL|Methanocella arvoryzae (strain DSM 22066

Query: 1 GAKTPARGQP 10
GAK PA +P
Sbjct: 182 GAKVPAEMKP 191


>sp|SYH_PYRCJ|HISTIDINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GAKTPARG 8
G KTPA G
Sbjct: 305 GVKTPALG 312


>sp|Y1665_METJA|UPF0210 protein MJ1665|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AKTPARG 8
A TPARG
Sbjct: 283 APTPARG 289




120|Sequence|596|605|ARGQPLPTPP

>sp|PRIS_HYPBU|DNA primase small subunit PriS|Hyperthermus butylicus (strain DSM 5456

Query: 2 RGQPLPTPP 10
RG+P+P PP
Sbjct: 216 RGKPIPIPP 224


>sp|COBS_METAC|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ARGQPLPTP 9
A G+PLP P
Sbjct: 167 AFGKPLPRP 175


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 RGQPLPT 8
RG+P+PT
Sbjct: 443 RGEPVPT 449


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 RGQPLPT 8
RG+P+PT
Sbjct: 443 RGEPVPT 449


>sp|ENO_HALWD|ENOLASE walsbyi (strain DSM 16790

Query: 2 RGQPLPTP 9
RG+ PTP
Sbjct: 129 RGESFPTP 136


>sp|GYRA_HALL2|DNA gyrase subunit A|Haloferax lucentense (strain DSM 14919

Query: 3 GQPLPT 8
G+PLPT
Sbjct: 426 GEPLPT 431


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 GQPLPTPP 10
GQ +P PP
Sbjct: 683 GQEMPIPP 690


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 3 GQPLPTPP 10
GQ +P PP
Sbjct: 683 GQEMPIPP 690


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 RGQPLPTPP 10
RG+PLP P
Sbjct: 207 RGKPLPLKP 215


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 5 PLPTP 9
PLPTP
Sbjct: 413 PLPTP 417


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 RGQPLPT 8
+G+P+PT
Sbjct: 446 KGEPIPT 452


>sp|EF1A_HALSA|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 700922

Query: 3 GQPLPTPP 10
G P+P PP
Sbjct: 212 GLPVPQPP 219


>sp|EF1A_HALS3|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 29341

Query: 3 GQPLPTPP 10
G P+P PP
Sbjct: 212 GLPVPQPP 219


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 2 RGQPLPTPP 10
RG+P+P P
Sbjct: 218 RGKPVPLKP 226


>sp|LYSY_IGNH4|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 RGQPLPTP 9
RG P+P P
Sbjct: 284 RGAPMPYP 291


>sp|APE1_AERPE|HOMING endonuclease I-ApeI|Aeropyrum pernix (strain ATCC 700893

Query: 3 GQPLPTP 9
G+PLP P
Sbjct: 198 GRPLPGP 204




121|Sequence|601|610|LPTPPAPPDP

>sp|PRIS_AERPE|DNA primase small subunit PriS|Aeropyrum pernix (strain ATCC 700893

Query: 2 PTPPAPPDP 10
P PP+P DP
Sbjct: 192 PAPPSPDDP 200


>sp|TRUA_THESM|TRNA pseudouridine synthase A|Thermococcus sibiricus (strain DSM 12597

Query: 4 PPAPPD 9
PPAPP+
Sbjct: 212 PPAPPE 217


>sp|TRUA_PYRFU|TRNA pseudouridine synthase A|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PPAPPD 9
PPAPP+
Sbjct: 209 PPAPPE 214


>sp|TRUA_PYRAB|TRNA pseudouridine synthase A|Pyrococcus abyssi (strain GE5 /

Query: 4 PPAPPD 9
PPAPP+
Sbjct: 209 PPAPPE 214


>sp|PYRG_METHJ|CTP synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PTPPAPP 8
PT P+PP
Sbjct: 505 PTSPSPP 511


>sp|TRUA_THEKO|TRNA pseudouridine synthase A|Thermococcus kodakarensis (strain ATCC

Query: 4 PPAPPD 9
PPAPP+
Sbjct: 213 PPAPPE 218


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PTPPAPP 8
PT P+PP
Sbjct: 505 PTKPSPP 511


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 2 PTPPAPPD 9
P PP P D
Sbjct: 1243 PEPPKPED 1250


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 LPTPPAP 7
+P PPAP
Sbjct: 686 MPIPPAP 692


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 LPTPPAP 7
+P PPAP
Sbjct: 686 MPIPPAP 692


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 LPTPPAP 7
+P PPAP
Sbjct: 686 MPIPPAP 692


>sp|TRUA_THEGJ|TRNA pseudouridine synthase A|Thermococcus gammatolerans (strain DSM

Query: 4 PPAPPD 9
PPAPP+
Sbjct: 213 PPAPPE 218


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PTPPAPPDP 10
PT PP+P
Sbjct: 423 PTATQPPEP 431


>sp|GATE_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Natronomonas pharaonis (strain ATCC

Query: 4 PPAPPDP 10
PP PDP
Sbjct: 429 PPVEPDP 435


>sp|GATE_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 4 PPAPPDP 10
PP PDP
Sbjct: 434 PPVDPDP 440


>sp|GATE_HALS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 4 PPAPPDP 10
PP PDP
Sbjct: 434 PPVDPDP 440


>sp|ATGT_PYRAB|TRNA-GUANINE(15) transglycosylase|Pyrococcus abyssi (strain GE5 /

Query: 1 LPTPPAPP 8
+PTPP P
Sbjct: 131 IPTPPDAP 138


>sp|NADE_AERPE|NH(3)-DEPENDENT NAD(+) synthetase|Aeropyrum pernix (strain ATCC 700893

Query: 3 TPPAPPD 9
+PPA PD
Sbjct: 265 SPPASPD 271


>sp|PUR7_THEAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LPTPPAPPDP 10
+P P PP P
Sbjct: 262 MPEPDIPPLP 271


>sp|ATGT_PYRHO|TRNA-GUANINE(15) transglycosylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LPTPPAPP 8
+PTPP P
Sbjct: 131 IPTPPDAP 138


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 1 LPTPPAPP 8
LP PP+ P
Sbjct: 141 LPVPPSTP 148


>sp|TRPE_AERPE|ANTHRANILATE synthase component 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 LPTPPAPP 8
+P+PP PP
Sbjct: 1 MPSPPEPP 8


>sp|NNR_THEPD|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Thermofilum pendens (strain DSM

Query: 1 LPTPPAPPD 9
+P PP PD
Sbjct: 230 VPLPPRRPD 238


>sp|THYX_HALMA|FLAVIN-DEPENDENT thymidylate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 TPPAPPDP 10
TPP+ DP
Sbjct: 120 TPPSATDP 127


>sp|ATGT_THEON|TRNA-GUANINE(15) transglycosylase|Thermococcus onnurineus (strain NA1)

Query: 1 LPTPPAPP 8
+PTPP P
Sbjct: 127 IPTPPDAP 134


>sp|TF2B5_HALSA|TRANSCRIPTION initiation factor IIB 5|Halobacterium salinarum (strain ATCC 700922

Query: 1 LPTPPAPPD 9
LPTPP D
Sbjct: 214 LPTPPVSLD 222


>sp|PT1_HALVD|PHOSPHOENOLPYRUVATE-PROTEIN phosphotransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 LPTPPAPPD 9
LP PPAP D
Sbjct: 29 LPEPPAPVD 37


>sp|Y964_METJA|UNCHARACTERIZED protein MJ0964|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LPTPPAPPD 9
+PT P PD
Sbjct: 33 VPTTPKSPD 41


>sp|ATGT_THEKO|TRNA-GUANINE(15) transglycosylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LPTPPAPP 8
+PTPP P
Sbjct: 127 IPTPPDAP 134


>sp|ATGT_PYRFU|TRNA-GUANINE(15) transglycosylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LPTPPAPP 8
+PTPP P
Sbjct: 131 IPTPPDAP 138


>sp|RS3A_METTP|SMALL ribosomal subunit protein eS1|Methanothrix thermoacetophila (strain

Query: 1 LPTPPAPPDP 10
+P P A P+P
Sbjct: 196 VPHPAAVPEP 205


>sp|CAS1_THEPD|CRISPR-ASSOCIATED endonuclease Cas1|Thermofilum pendens (strain DSM 2475

Query: 1 LPTPPAPPDP 10
LP P PPDP
Sbjct: 123 LPALPEPPDP 132


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 PTPPAPPD 9
P PP P D
Sbjct: 725 PEPPKPED 732




122|Sequence|606|615|APPDPFKSPA

>sp|RF1_HALMA|PEPTIDE chain release factor subunit|Haloarcula marismortui (strain ATCC

Query: 1 APPDPFKS 8
+PPDP +S
Sbjct: 117 SPPDPIES 124


>sp|TRM1_METJA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocaldococcus

Query: 4 DPFKSPA 10
DPF SPA
Sbjct: 131 DPFGSPA 137


>sp|TRM1_SULAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfolobus acidocaldarius

Query: 4 DPFKSPA 10
DPF SPA
Sbjct: 131 DPFGSPA 137


>sp|TRM1_ARCFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Archaeoglobus fulgidus

Query: 4 DPFKSPA 10
DPF SPA
Sbjct: 108 DPFGSPA 114


>sp|TATCT_HALVD|SEC-INDEPENDENT protein translocase protein TatCt|Haloferax volcanii (strain ATCC

Query: 2 PPDPF 6
PPDPF
Sbjct: 230 PPDPF 234


>sp|TRM1_SULTO|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfurisphaera tokodaii

Query: 4 DPFKSPA 10
DPF SPA
Sbjct: 129 DPFGSPA 135


>sp|TRM1_PYRIL|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum islandicum

Query: 4 DPFKSPA 10
DPF SPA
Sbjct: 127 DPFGSPA 133


>sp|TRM1_PYRCJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum calidifontis

Query: 4 DPFKSPA 10
DPF SPA
Sbjct: 131 DPFGSPA 137


>sp|COOS1_METAC|CARBON monoxide dehydrogenase 1|Methanosarcina acetivorans (strain ATCC

Query: 3 PDPFKS 8
PDPFK+
Sbjct: 605 PDPFKA 610


>sp|COOS1_METMA|CARBON monoxide dehydrogenase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PDPFKS 8
PDPFK+
Sbjct: 605 PDPFKA 610


>sp|TRM1_METS5|TRNA (guanine(26)-N(2))-dimethyltransferase|Metallosphaera sedula

Query: 4 DPFKSPA 10
DPF SPA
Sbjct: 129 DPFGSPA 135


>sp|SYM_HALMA|METHIONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 APPDPFKSPA 10
APP F PA
Sbjct: 544 APPAEFGEPA 553


>sp|HYD2B_PYRFU|SULFHYDROGENASE 2 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PPDPF 6
PPDP+
Sbjct: 108 PPDPY 112


>sp|GLYA_HYPBU|SERINE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 PPDPFKSPA 10
PPD K P+
Sbjct: 359 PPDAIKDPS 367


>sp|TRM1_PYRAE|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum aerophilum

Query: 4 DPFKSPA 10
DPF SPA
Sbjct: 129 DPFGSPA 135


>sp|G3P_HYPBU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Hyperthermus butylicus (strain DSM 5456

Query: 3 PDPFKSPA 10
PDP K+P+
Sbjct: 186 PDPVKTPS 193


>sp|TRM1_PYRNV|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum neutrophilum

Query: 4 DPFKSPA 10
DPF SPA
Sbjct: 127 DPFGSPA 133


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 2 PPDPFKSP 9
P DP KSP
Sbjct: 741 PGDPTKSP 748


>sp|TRM1_SACS2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus solfataricus

Query: 4 DPFKSPA 10
DPF SPA
Sbjct: 130 DPFGSPA 136


>sp|NCPP_ARCFU|PROBABLE inosine/xanthosine triphosphatase|Archaeoglobus fulgidus (strain

Query: 1 APPDPFKS 8
APP PF +
Sbjct: 34 APPQPFDA 41


>sp|TRM1_PYRAR|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum arsenaticum

Query: 4 DPFKSPA 10
DPF SPA
Sbjct: 129 DPFGSPA 135


>sp|SYM_HALSA|METHIONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 APPDPFKSPA 10
APP F PA
Sbjct: 524 APPAEFGEPA 533


>sp|Y2292_ARCFU|UNCHARACTERIZED protein AF_2292|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PPDPFKSP 9
PPD K P
Sbjct: 221 PPDVLKDP 228


>sp|GCH1L_HALSA|GTP cyclohydrolase 1 type 2|Halobacterium salinarum (strain ATCC 700922

Query: 3 PDPFKSPA 10
PDP +PA
Sbjct: 139 PDPTSAPA 146


>sp|G3P2_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PDPFKSPA 10
PDP K P+
Sbjct: 186 PDPIKLPS 193


>sp|GLNA_SULAC|GLUTAMINE synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PPDPFKSP 9
PPDP +P
Sbjct: 365 PPDPSSNP 372


>sp|G3P_METMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PDPFKSPA 10
PDP K P+
Sbjct: 186 PDPIKLPS 193


>sp|TRM1_METPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaerula palustris

Query: 4 DPFKSPA 10
DPF SPA
Sbjct: 124 DPFGSPA 130




123|Sequence|611|620|FKSPASKGPL

>sp|Y1530_METJA|UNCHARACTERIZED N-acetyltransferase MJ1530|Methanocaldococcus jannaschii (strain

Query: 2 KSPASKGPL 10
K P +KGPL
Sbjct: 143 KKPNAKGPL 151


>sp|GATE_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina mazei (strain ATCC

Query: 2 KSPASKGPL 10
K PA+ GPL
Sbjct: 593 KGPAALGPL 601


>sp|GATE_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina barkeri (strain Fusaro /

Query: 2 KSPASKGPL 10
K PA+ GPL
Sbjct: 593 KGPAALGPL 601




124|Sequence|616|625|SKGPLASTDL

>sp|NCPP_ARCFU|PROBABLE inosine/xanthosine triphosphatase|Archaeoglobus fulgidus (strain

Query: 1 SKGPLASTDL 10
SKG ++ TDL
Sbjct: 141 SKGAISRTDL 150




125|Sequence|621|630|ASTDLVTDWT

>sp|AATA_METS5|A-TYPE ATP synthase subunit A|Metallosphaera sedula (strain ATCC 51363

Query: 4 DLVTDW 9
DLV+DW
Sbjct: 440 DLVSDW 445


>sp|AATA_AERPE|A-TYPE ATP synthase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 1 ASTDLVTDW 9
A DLVT W
Sbjct: 445 AYVDLVTQW 453


>sp|CPGS_THEKO|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus kodakarensis (strain

Query: 1 ASTDLVTDW 9
A+ D+VT W
Sbjct: 385 AAVDVVTKW 393


>sp|CPGS_THEON|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus onnurineus (strain

Query: 1 ASTDLVTDW 9
A+ D+VT W
Sbjct: 385 AAVDVVTRW 393


>sp|CPGS_THEGJ|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus gammatolerans

Query: 1 ASTDLVTDW 9
A+ D+VT W
Sbjct: 386 AAVDVVTRW 394


>sp|Y817_ARCFU|UNCHARACTERIZED protein AF_0817|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DLVTDW 9
DLV DW
Sbjct: 311 DLVPDW 316


>sp|LYSZ_SACS2|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 DLVTDWT 10
D+VTD+T
Sbjct: 37 DIVTDYT 43


>sp|LYSZ_SACI7|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 DLVTDWT 10
D+VTD+T
Sbjct: 37 DIVTDYT 43


>sp|LYSZ_SACI6|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 DLVTDWT 10
D+VTD+T
Sbjct: 37 DIVTDYT 43


>sp|LYSZ_SACI4|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 DLVTDWT 10
D+VTD+T
Sbjct: 37 DIVTDYT 43


>sp|LYSZ_SACI3|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 DLVTDWT 10
D+VTD+T
Sbjct: 37 DIVTDYT 43


>sp|LYSZ_SACI2|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 DLVTDWT 10
D+VTD+T
Sbjct: 37 DIVTDYT 43


>sp|LYSZ_SACI1|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 DLVTDWT 10
D+VTD+T
Sbjct: 37 DIVTDYT 43


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 STDLVTDW 9
S DL+ DW
Sbjct: 1024 SGDLIQDW 1031


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 STDLVTDW 9
S DLV DW
Sbjct: 1037 SGDLVKDW 1044




126|Sequence|626|635|VTDWTCGLSV

>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DWTCGLSV 10
DW CGL++
Sbjct: 126 DWMCGLAI 133


>sp|PYRDB_ARCFU|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Archaeoglobus fulgidus

Query: 1 VTDWTCGL 8
V +W CGL
Sbjct: 59 VVNWKCGL 66


>sp|SPH3_HALVD|SMC-LIKE protein Sph3|Haloferax volcanii (strain ATCC 29605

Query: 2 TDWTCGLSV 10
T WTCG V
Sbjct: 328 TCWTCGTEV 336


>sp|SPH2_HALSA|SMC-LIKE protein Sph2|Halobacterium salinarum (strain ATCC 700922

Query: 4 WTCGLSV 10
WTCG V
Sbjct: 342 WTCGTEV 348


>sp|SPH2_HALS3|SMC-LIKE protein Sph2|Halobacterium salinarum (strain ATCC 29341

Query: 4 WTCGLSV 10
WTCG V
Sbjct: 342 WTCGTEV 348


>sp|SAHH_ARCFU|ADENOSYLHOMOCYSTEINASE fulgidus (strain ATCC 49558

Query: 1 VTDWTCG 7
++DW CG
Sbjct: 398 LSDWRCG 404


>sp|MTIP_METJA|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanocaldococcus jannaschii

Query: 1 VTDWTCGLS 9
+T++ CG+S
Sbjct: 195 ITNYACGIS 203


>sp|SYC_HALSA|CYSTEINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 WTCGLSV 10
+TCGL+V
Sbjct: 27 YTCGLTV 33


>sp|Y308_METJA|UNCHARACTERIZED protein MJ0308|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 WTCG 7
WTCG
Sbjct: 229 WTCG 232


>sp|METXA_HALMA|HOMOSERINE O-acetyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VTDWT 5
VTDWT
Sbjct: 120 VTDWT 124


>sp|SIHH_METAC|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VTDWTCG 7
+T W CG
Sbjct: 404 MTGWECG 410




127|Sequence|631|644|CGLSVLGPTDGGDM

>sp|RNP2_METKA|RIBONUCLEASE P protein component 2|Methanopyrus kandleri (strain AV19 /

Query: 3 LSVLGPTDGG 12
LSVLGPT G
Sbjct: 42 LSVLGPTGTG 51


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 CGLSVLGPTDGG 12
C S+L PT G
Sbjct: 172 CSFSILAPTGTG 183


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 LSVLGPTDGGD 13
+SVLGPT G +
Sbjct: 889 MSVLGPTFGDE 899


>sp|MCH_ARCFU|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CGLSVLGPTDGGDM 14
CG++V G D G M
Sbjct: 38 CGVNVPGSYDAGIM 51


>sp|XPD_THEAC|ATP-DEPENDENT DNA helicase XPD|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 SVLGPTDGGDM 14
++L P DGG M
Sbjct: 331 AILSPEDGGYM 341


>sp|HMDH_HALVD|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Haloferax volcanii (strain ATCC 29605

Query: 2 GLSVLGPTDGGD 13
GL +LG + GGD
Sbjct: 350 GLDILGVSGGGD 361


>sp|RPIA_AERPE|RIBOSE-5-PHOSPHATE isomerase A|Aeropyrum pernix (strain ATCC 700893

Query: 1 CGLSVLGPTDG 11
CG VLGP G
Sbjct: 224 CGYRVLGPYRG 234


>sp|KDPA_HALSA|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 2 GLSVLGPTDGG 12
GLS G T+GG
Sbjct: 359 GLSTTGTTNGG 369


>sp|KDPA_HALS3|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 2 GLSVLGPTDGG 12
GLS G T+GG
Sbjct: 359 GLSTTGTTNGG 369


>sp|SYI_HALWD|ISOLEUCINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 LSVLGPTDGGD 13
+SV+GP G D
Sbjct: 886 MSVIGPEFGAD 896


>sp|DAPF_META3|DIAMINOPIMELATE epimerase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GLSVLGPTDGGDM 14
G VL DGGD+
Sbjct: 257 GNKVLAHLDGGDL 269


>sp|NDK_STAMF|NUCLEOSIDE diphosphate kinase|Staphylothermus marinus (strain ATCC 43588

Query: 5 VLGPTDG 11
++GPTDG
Sbjct: 89 MIGPTDG 95


>sp|NDK_HYPBU|NUCLEOSIDE diphosphate kinase|Hyperthermus butylicus (strain DSM 5456

Query: 5 VLGPTDG 11
++GPTDG
Sbjct: 89 MIGPTDG 95


>sp|MRE11_HALSA|DNA double-strand break repair protein|Halobacterium salinarum (strain

Query: 6 LGPTDG 11
LGPTDG
Sbjct: 246 LGPTDG 251


>sp|MCH_META3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 CGLSVLGPTDGG 12
CG++V+G + G
Sbjct: 38 CGVNVMGSIEAG 49


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 SVLGPTDGGD 13
S+LG + GGD
Sbjct: 853 SILGGSGGGD 862


>sp|HMDH_PYRAB|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus abyssi (strain GE5 /

Query: 2 GLSVLGPTDGGD 13
LS++G GGD
Sbjct: 355 ALSIMGVAGGGD 366


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus

Query: 1 CGLSVLGPTD 10
C L +GP D
Sbjct: 68 CNLCTMGPCD 77


>sp|MCH_METM7|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C7 /

Query: 1 CGLSVLGPTDGGDM 14
CG++V+G + G +
Sbjct: 38 CGVNVMGSFEAGKL 51


>sp|CDC6B_HALMA|ORC1-TYPE DNA replication protein 2|Haloarcula marismortui (strain ATCC 43049

Query: 4 SVLGPTDGGD 13
+ LG DGGD
Sbjct: 238 AALGRQDGGD 247


>sp|MCH_METMP|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 1 CGLSVLGPTDGGDM 14
CG++V+G + G +
Sbjct: 38 CGVNVMGSFEAGKL 51


>sp|MCH_METM5|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C5 /

Query: 1 CGLSVLGPTDGGDM 14
CG++V+G + G +
Sbjct: 38 CGVNVMGSFEAGKL 51


>sp|MEND_HALSA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 LSVLGPTDGG 12
L V GP DGG
Sbjct: 237 LVVAGPADGG 246


>sp|MEND_HALS3|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 LSVLGPTDGG 12
L V GP DGG
Sbjct: 237 LVVAGPADGG 246


>sp|GVPF1_HALSA|GAS vesicle protein F1|Halobacterium salinarum (strain ATCC 700922

Query: 2 GLSVLGPTD 10
G+ +LGP D
Sbjct: 115 GVKILGPGD 123


>sp|Y531_METJA|UNIVERSAL stress protein MJ0531|Methanocaldococcus jannaschii (strain ATCC

Query: 8 PTDGGDM 14
PTDG D+
Sbjct: 32 PTDGSDV 38


>sp|Y065_METJA|UNCHARACTERIZED protein MJ0065|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GLSVLGPTDG 11
G+ ++G TDG
Sbjct: 287 GIKIIGITDG 296


>sp|DAPF_METJA|DIAMINOPIMELATE epimerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 VLGPTDGGDM 14
VL DGGD+
Sbjct: 258 VLAHLDGGDL 267


>sp|RS27_ARCFU|SMALL ribosomal subunit protein eS27|Archaeoglobus fulgidus (strain

Query: 1 CGLSVLGPTDG 11
CG +V PT G
Sbjct: 32 CGRTVAEPTGG 42


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 CGLSVLGP 8
CG+ V GP
Sbjct: 657 CGIEVQGP 664


>sp|Y612_METJA|PROBABLE arogenate/prephenate dehydrogenase|Methanocaldococcus jannaschii

Query: 3 LSVLGPTDG 11
+S++G TDG
Sbjct: 8 ISIIGGTDG 16


>sp|HIS1_NATPD|ATP phosphoribosyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 CGLSVLGPTDGG 12
C L + P DGG
Sbjct: 90 CRLVLASPEDGG 101


>sp|CBID_METJA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GLSVLGPT 9
GLS+LG T
Sbjct: 169 GLSILGTT 176


>sp|AROA_METLZ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 3 LSVLGPTDGGDM 14
++ GP GGD+
Sbjct: 145 FTITGPVSGGDV 156


>sp|Y1051_ARCFU|UNCHARACTERIZED protein AF_1051|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 VLGPTDGGDM 14
V G T GG+M
Sbjct: 93 VYGRTSGGEM 102


>sp|RS27_PYRAB|SMALL ribosomal subunit protein eS27|Pyrococcus abyssi (strain GE5 /

Query: 1 CGLSVLGPTDG 11
CG +++ PT G
Sbjct: 42 CGATLVEPTGG 52






THE END