VPS41_HUMAN HumanVirus

1|SequenceR|10|1|GTEQEEAEAM

>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11

Query: 1   GTEQEEAEAM 10
           G E  EAEA+
Sbjct: 173 GVEHREAEAV 182


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 2   TEQEEAEAM 10
           TE+E+ EA+
Sbjct: 600 TEREQKEAL 608


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 2   TEQEEAEAM 10
           TE+E+ EA+
Sbjct: 600 TEREQKEAL 608


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 2   TEQEEAEAM 10
           TE+E+ EA+
Sbjct: 600 TEREQKEAL 608


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 2   TEQEEAEAM 10
           TE+E+ EA+
Sbjct: 600 TEREQKEAL 608


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 2   TEQEEAEAM 10
           TE+E+ EA+
Sbjct: 600 TEREQKEAL 608


>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   GTEQEE 6
           GTEQ+E
Sbjct: 440 GTEQDE 445


>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985

Query: 1  GTEQEE 6
          GT+QEE
Sbjct: 41 GTKQEE 46




2|SequenceR|15|6|SEELSGTEQE

>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1   SEELSGT 7
           SEE++GT
Sbjct: 974 SEEINGT 980




3|SequenceR|20|11|ESEDTSEELS

>sp|CEP1_HHV6U|CYTOPLASMIC envelopment protein 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 1  ESEDTSEEL 9
          +SEDT +EL
Sbjct: 86 DSEDTLQEL 94


>sp|VPU_HV1VI|PROTEIN Vpu|Human immunodeficiency virus type 1

Query: 1  ESEDTSEELS 10
          ESE  +EEL+
Sbjct: 56 ESEGDAEELA 65


>sp|CEP1_HHV6Z|CYTOPLASMIC envelopment protein 1|Human herpesvirus 6B (strain Z29)

Query: 1  ESEDTSEEL 9
          +SEDT +EL
Sbjct: 86 DSEDTLQEL 94


>sp|VPU_HV1MN|PROTEIN Vpu|Human immunodeficiency virus type 1

Query: 1  ESEDTSEELS 10
          ESE   EELS
Sbjct: 56 ESEGDQEELS 65


>sp|CEP1_HHV7J|CYTOPLASMIC envelopment protein 1|Human herpesvirus 7 (strain JI)

Query: 1  ESEDTSEEL 9
          +SEDT EE+
Sbjct: 86 DSEDTLEEI 94


>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38

Query: 1   ESEDTSEEL 9
           E+ED+++EL
Sbjct: 124 EAEDSTQEL 132




4|SequenceR|25|16|ESEEEESEDT

>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)

Query: 1   ESEEEESE 8
           +SE+EESE
Sbjct: 207 KSEDEESE 214


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1   ESEEEESED 9
           + EEE+ ED
Sbjct: 970 QPEEEQEED 978


>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1   ESEEEESEDT 10
           + E+E SEDT
Sbjct: 135 DQEQEISEDT 144


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1   ESEEEESED 9
           + EEE+ ED
Sbjct: 970 QPEEEQEED 978


>sp|ORF4A_MERS1|NON-STRUCTURAL protein ORF4a|Middle East respiratory syndrome-related coronavirus

Query: 1   ESEEEES 7
           +SEEEES
Sbjct: 100 QSEEEES 106


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 2    SEEEES----EDT 10
            SE+EES    EDT
Sbjct: 999  SEQEESSEVLEDT 1011


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 2    SEEEES----EDT 10
            SE+EES    EDT
Sbjct: 999  SEQEESSEVLEDT 1011


>sp|SHUT_VZVD|VIRION host shutoff protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   SEEEESED 9
           SEE +S+D
Sbjct: 149 SEENKSQD 156


>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31

Query: 1  ESEEEESEDT 10
          E E E+S DT
Sbjct: 34 EDENEDSSDT 43




5|SequenceR|30|21|LKPEEESEEE

>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1   LKPEEESEEE 10
           L+PEEE EE+
Sbjct: 969 LQPEEEQEED 978


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1   LKPEEESEEE 10
           L+PEEE EE+
Sbjct: 969 LQPEEEQEED 978


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 1    LKPEEES 7
            L+PEEES
Sbjct: 2469 LRPEEES 2475


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 1    LKPEEESEE 9
            ++P+ ESEE
Sbjct: 1122 IRPKHESEE 1130




6|SequenceR|35|26|LREYKLKPEE

>sp|NS1_INBGL|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GL/1954)

Query: 2   REYKLKPEE 10
           +EY+L PEE
Sbjct: 270 QEYRLSPEE 278


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 1    LREYKLKP 8
            LREY L+P
Sbjct: 1641 LREYGLRP 1648


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 1    LREYKLKP 8
            L+EY LKP
Sbjct: 1642 LKEYGLKP 1649


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 1    LREYKLKPEE 10
            +RE KL P E
Sbjct: 3158 MRERKLTPAE 3167


>sp|PG005_VACCC|PROTEIN OPG005|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  LREYKLKP 8
          L+++KLKP
Sbjct: 12 LKKWKLKP 19


>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United

Query: 1    LREYKLKP 8
            L+EY LKP
Sbjct: 1551 LKEYGLKP 1558


>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)

Query: 1   LREYKLKP 8
           L+E++LKP
Sbjct: 434 LKEFQLKP 441


>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)

Query: 1   LREYKLKP 8
           L+E++LKP
Sbjct: 434 LKEFQLKP 441


>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)

Query: 1   LREYKLKP 8
           L+E++LKP
Sbjct: 434 LKEFQLKP 441


>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)

Query: 1   LREYKLKP 8
           L+E++LKP
Sbjct: 434 LKEFQLKP 441


>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)

Query: 1   LREYKLKP 8
           L+E++LKP
Sbjct: 434 LKEFQLKP 441


>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United

Query: 3   EYKLKPE 9
           EYK+ PE
Sbjct: 664 EYKIDPE 670


>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)

Query: 1   LREYKLKP 8
           L+E++LKP
Sbjct: 434 LKEFQLKP 441


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 1   LREYKLKPEE 10
           +RE+ +KP+E
Sbjct: 194 VREHLIKPDE 203


>sp|GAAP_VACCL|GOLGI anti-apoptotic protein|Vaccinia virus (strain Lister) (VACV)

Query: 4   YKLKPEE 10
           +KL PEE
Sbjct: 202 HKLSPEE 208


>sp|GAAP_VACC8|GOLGI anti-apoptotic protein|Vaccinia virus (strain LC16m8) (VACV)

Query: 4   YKLKPEE 10
           +KL PEE
Sbjct: 202 HKLSPEE 208


>sp|GAAP_VACC0|GOLGI anti-apoptotic protein|Vaccinia virus (strain LC16m0) (VACV)

Query: 4   YKLKPEE 10
           +KL PEE
Sbjct: 202 HKLSPEE 208


>sp|UL142_HCMVM|MEMBRANE glycoprotein UL142|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   LREYKLKP 8
           LR Y L+P
Sbjct: 192 LRNYTLEP 199


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 3   EYKLKPE 9
           +YK +PE
Sbjct: 805 QYKFQPE 811


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 3   EYKLKPE 9
           +YK +PE
Sbjct: 805 QYKFQPE 811


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 3   EYKLKPE 9
           +YK +PE
Sbjct: 805 QYKFQPE 811


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 3   EYKLKPE 9
           +YK +PE
Sbjct: 805 QYKFQPE 811


>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)

Query: 1   LREYKLKPEE 10
           L+E+   PEE
Sbjct: 253 LKEHDFNPEE 262


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3   EYKLKPE 9
           +YK +PE
Sbjct: 806 QYKFQPE 812


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3   EYKLKPE 9
           +YK +PE
Sbjct: 806 QYKFQPE 812


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3   EYKLKPE 9
           +YK +PE
Sbjct: 806 QYKFQPE 812


>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3   EYKLKPE 9
           +YK +PE
Sbjct: 526 QYKFQPE 532


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 1   LREYKLKPEE 10
           + +YK  PE+
Sbjct: 792 MHKYKYHPED 801


>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)

Query: 1   LREYKLKPEE 10
           L+E+   PEE
Sbjct: 254 LKEHDFNPEE 263


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 3   EYKLKPE 9
           +YK +PE
Sbjct: 806 QYKFQPE 812


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3   EYKLKPE 9
           +YK +PE
Sbjct: 806 QYKFQPE 812


>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus

Query: 1   LREYKLKPEE 10
           L+E+   PEE
Sbjct: 254 LKEHDFSPEE 263


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3   EYKLKPE 9
           +YK +PE
Sbjct: 806 QYKFQPE 812


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3   EYKLKPE 9
           +YK +PE
Sbjct: 806 QYKFQPE 812


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)

Query: 4    YKLKP 8
            YKLKP
Sbjct: 1685 YKLKP 1689


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 4    YKLKP 8
            YKLKP
Sbjct: 1684 YKLKP 1688


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)

Query: 4    YKLKP 8
            YKLKP
Sbjct: 1684 YKLKP 1688


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 4    YKLKP 8
            YKLKP
Sbjct: 1684 YKLKP 1688


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 4    YKLKP 8
            YKLKP
Sbjct: 1684 YKLKP 1688


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 4    YKLKP 8
            YKLKP
Sbjct: 1684 YKLKP 1688


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 4    YKLKP 8
            YKLKP
Sbjct: 1684 YKLKP 1688


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 4    YKLKP 8
            YKLKP
Sbjct: 1684 YKLKP 1688


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 4    YKLKP 8
            YKLKP
Sbjct: 1684 YKLKP 1688


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 4    YKLKP 8
            YKLKP
Sbjct: 1684 YKLKP 1688


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 4    YKLKP 8
            YKLKP
Sbjct: 1684 YKLKP 1688


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 4    YKLKP 8
            YKLKP
Sbjct: 1685 YKLKP 1689




7|SequenceR|40|31|TVGNSLREYK

>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   VGNSLREY 9
           VGN L+E+
Sbjct: 150 VGNGLKEF 157


>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   VGNSLREY 9
           VGN L+E+
Sbjct: 150 VGNGLKEF 157


>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40

Query: 2   VGNSLREYK 10
           VG   REY+
Sbjct: 336 VGKKFREYR 344


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 1   TVGNSLREY 9
           TVG+S  EY
Sbjct: 802 TVGSSKSEY 810


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 1   TVGNSLREYK 10
           T+G  L++Y+
Sbjct: 720 TLGKRLKQYR 729


>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)

Query: 2   VGNSLRE 8
           VGN L+E
Sbjct: 902 VGNGLKE 908


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 1   TVGNSLR 7
           T+GN+L+
Sbjct: 688 TIGNALK 694




8|SequenceR|45|36|KQLIETVGNS

>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1   KQLIETVGN 9
           KQ++E+ GN
Sbjct: 500 KQIVESCGN 508


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1   KQLIETVGN 9
           KQ++E+ GN
Sbjct: 500 KQIVESCGN 508


>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 4    IETVGNS 10
            +ET GNS
Sbjct: 2216 VETAGNS 2222


>sp|DR7_HHV6U|TRANSACTIVATOR protein DR7|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   LIETVGN 9
           L+ETVG+
Sbjct: 195 LLETVGD 201


>sp|DR6_HHV6U|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   LIETVGN 9
           L+ETVG+
Sbjct: 227 LLETVGD 233


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 2    QLIETVGN 9
            QL+ET+ N
Sbjct: 2264 QLVETLPN 2271


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 2    QLIETVGN 9
            QL+ET+ N
Sbjct: 2264 QLVETLPN 2271


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 2    QLIETVGN 9
            QL+ET+ N
Sbjct: 2264 QLVETLPN 2271




9|SequenceR|50|41|CSAADKQLIE

>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)

Query: 1   CSAADKQLIE 10
           CSAAD+ L+E
Sbjct: 444 CSAADRALVE 453


>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human

Query: 1   CSAADKQLIE 10
           CSA D+ L+E
Sbjct: 434 CSAPDRALVE 443


>sp|DPOL_VARV|DNA polymerase|Variola virus

Query: 1  CSAADKQLIE 10
          CS AD  LIE
Sbjct: 83 CSVADMWLIE 92


>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1  CSAADKQLIE 10
          CS AD  LIE
Sbjct: 83 CSVADMWLIE 92


>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  CSAADKQLIE 10
          CS AD  LIE
Sbjct: 83 CSVADMWLIE 92


>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)

Query: 1  CSAADKQLIE 10
          CS AD  LIE
Sbjct: 83 CSVADMWLIE 92


>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)

Query: 1  CSAADKQLIE 10
          CS AD  LIE
Sbjct: 83 CSVADMWLIE 92


>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1  CSAADK 6
          CSAADK
Sbjct: 27 CSAADK 32


>sp|ORF58_HHV8P|PROTEIN ORF58|Human herpesvirus 8 type P

Query: 1  CSAADKQL 8
          C AA KQL
Sbjct: 65 CPAAQKQL 72


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 2   SAADKQLIE 10
           +A+DK LIE
Sbjct: 622 NASDKNLIE 630


>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1  CSAADK 6
          CSA DK
Sbjct: 28 CSATDK 33


>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)

Query: 1   CSAADK 6
           CS ADK
Sbjct: 761 CSCADK 766


>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 4  ADKQLIE 10
          ADK++IE
Sbjct: 59 ADKRIIE 65


>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 4  ADKQLIE 10
          ADK++IE
Sbjct: 59 ADKRIIE 65


>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930

Query: 4  ADKQLIE 10
          ADK++IE
Sbjct: 59 ADKRIIE 65


>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 4  ADKQLIE 10
          ADK++IE
Sbjct: 59 ADKRIIE 65


>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 4  ADKQLIE 10
          ADK++IE
Sbjct: 59 ADKRIIE 65


>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 4  ADKQLIE 10
          ADK++IE
Sbjct: 59 ADKRIIE 65


>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 4  ADKQLIE 10
          ADK++IE
Sbjct: 59 ADKRIIE 65


>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky

Query: 4  ADKQLIE 10
          ADK++IE
Sbjct: 58 ADKRIIE 64


>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 4  ADKQLIE 10
          ADK++IE
Sbjct: 59 ADKRIIE 65


>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 4  ADKQLIE 10
          ADK++IE
Sbjct: 59 ADKRIIE 65


>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong

Query: 4  ADKQLIE 10
          ADK++IE
Sbjct: 59 ADKRIIE 65




10|SequenceR|55|46|DHVTMCSAAD

>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 2    HVTMCSAAD 10
            HVT C+A+D
Sbjct: 4705 HVTCCTASD 4713


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 2    HVTMCSAAD 10
            HV  C+A D
Sbjct: 4680 HVNCCTATD 4688


>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3  VTMCSAAD 10
          V +CSA+D
Sbjct: 24 VIICSASD 31


>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3  VTMCSAAD 10
          + +CSAAD
Sbjct: 24 LMICSAAD 31


>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3  VTMCSAAD 10
          + +CSAAD
Sbjct: 24 LIICSAAD 31


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 1    DHVTMCSA 8
            +H+T CS+
Sbjct: 2792 EHITSCSS 2799


>sp|UL107_HCMVA|UNCHARACTERIZED protein UL107|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2  HVTMCS 7
          H+T CS
Sbjct: 43 HITFCS 48


>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   DHVTMCS 7
           DHV++C+
Sbjct: 138 DHVSICA 144


>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   DHVTMCS 7
           DHV++C+
Sbjct: 138 DHVSICA 144


>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   DHVTMCS 7
           DHV++C+
Sbjct: 138 DHVSICA 144


>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)

Query: 2   HVTMCSAAD 10
           H+  C A D
Sbjct: 519 HIVRCCAGD 527


>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)

Query: 2   HVTMCSAAD 10
           H+  C A D
Sbjct: 519 HIVRCCAGD 527


>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 2   HVTMCSAAD 10
           H+  C A D
Sbjct: 519 HIVRCCAGD 527


>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)

Query: 2   HVTMCSAAD 10
           H+  C A D
Sbjct: 519 HIVRCCAGD 527


>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 6  CSAAD 10
          CSAAD
Sbjct: 27 CSAAD 31


>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)

Query: 1   DHVTMCSAA 9
           DH + C+A+
Sbjct: 584 DHFSPCAAS 592


>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)

Query: 1   DHVTMCSAA 9
           DH + C+A+
Sbjct: 584 DHFSPCAAS 592


>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)

Query: 1   DHVTMCSAA 9
           DH + C+A+
Sbjct: 584 DHFSPCAAS 592


>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)

Query: 1   DHVTMCSAA 9
           DH + C+A+
Sbjct: 584 DHFSPCAAS 592


>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23

Query: 1   DHVTMCSAA 9
           DH+  CS A
Sbjct: 326 DHLDECSIA 334


>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)

Query: 6   CSAAD 10
           CSAAD
Sbjct: 444 CSAAD 448


>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1   DHVTMCS 7
           DH T C+
Sbjct: 535 DHTTTCT 541


>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)

Query: 1   DHVTMCS 7
           DH T C+
Sbjct: 534 DHTTTCT 540


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 2    HVTMCSAAD 10
            H T CS +D
Sbjct: 5007 HETCCSQSD 5015


Query: 3    VTMCSAAD 10
            +TMC A D
Sbjct: 4614 LTMCHALD 4621


>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1   DHVTMCS 7
           DH T C+
Sbjct: 536 DHTTTCT 542


>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 1    DHVTMCSAA 9
            +H+  CSA+
Sbjct: 1076 NHIWSCSAS 1084


>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1   DHVTMCS 7
           DH T C+
Sbjct: 536 DHTTTCT 542




11|SequenceR|60|51|LALFKDHVTM

>sp|VL2_HPV60|MINOR capsid protein L2|Human papillomavirus type 60

Query: 2   ALFKDHVTM 10
           A F D VTM
Sbjct: 305 AFFNDEVTM 313


>sp|PHOSP_MUMPZ|PHOSPHOPROTEIN virus genotype N (strain

Query: 4   FKDHVTM 10
           F DHVT+
Sbjct: 293 FSDHVTI 299


>sp|PHOSP_MUMPS|PHOSPHOPROTEIN virus (strain SBL) (MuV)

Query: 4   FKDHVTM 10
           F DHVT+
Sbjct: 293 FSDHVTI 299


>sp|PHOSP_MUMPM|PHOSPHOPROTEIN virus genotype B (strain

Query: 4   FKDHVTM 10
           F DHVT+
Sbjct: 293 FSDHVTI 299


>sp|PHOSP_MUMPJ|PHOSPHOPROTEIN virus genotype A (strain

Query: 4   FKDHVTM 10
           F DHVT+
Sbjct: 293 FSDHVTI 299


>sp|PHOSP_MUMPE|PHOSPHOPROTEIN virus (strain Enders) (MuV)

Query: 4   FKDHVTM 10
           F DHVT+
Sbjct: 293 FSDHVTI 299


>sp|PHOSP_MUMP1|PHOSPHOPROTEIN virus (strain SBL-1) (MuV)

Query: 4   FKDHVTM 10
           F DHVT+
Sbjct: 292 FSDHVTI 298


>sp|TRX1_HHV8P|TRIPLEX capsid protein 1|Human herpesvirus 8 type P

Query: 1   LALFKDHVT 9
           +A+ KDH T
Sbjct: 256 VAMIKDHFT 264


>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin

Query: 5   KDHVTM 10
           KDH+ M
Sbjct: 952 KDHINM 957


>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)

Query: 5   KDHVTM 10
           KDH+ M
Sbjct: 952 KDHINM 957


>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate

Query: 1  LALFKDHVT 9
          L +F+DH T
Sbjct: 75 LKVFEDHPT 83


>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1

Query: 1  LALFKDHV 8
          ++LF++HV
Sbjct: 6  VSLFREHV 13




12|SequenceR|65|56|GYHTGLALFK

>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    GYHTGLAL 8
            G+HTG+A+
Sbjct: 1950 GFHTGVAI 1957


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    GYHTGLAL 8
            G+HTG+A+
Sbjct: 1949 GFHTGVAI 1956


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    GYHTGLAL 8
            G+HTG+A+
Sbjct: 1949 GFHTGVAI 1956


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    GYHTGLAL 8
            G+HTG+A+
Sbjct: 1950 GFHTGVAI 1957


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    GYHTGLAL 8
            G+HTG+A+
Sbjct: 1949 GFHTGVAI 1956


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    GYHTGLAL 8
            G+HTG+A+
Sbjct: 1783 GFHTGVAI 1790


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    GYHTGLAL 8
            G+HTG+A+
Sbjct: 1949 GFHTGVAI 1956


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    GYHTGLAL 8
            G+HTG+A+
Sbjct: 1949 GFHTGVAI 1956


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    GYHTGLAL 8
            G+HTG+A+
Sbjct: 1947 GFHTGVAI 1954


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    GYHTGLAL 8
            G+HTG+A+
Sbjct: 1949 GFHTGVAI 1956


>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain

Query: 1   GYHTGLALFK 10
           G+H GLA+ +
Sbjct: 564 GHHVGLAIME 573


>sp|ORF4B_MERS1|NON-STRUCTURAL protein ORF4b|Middle East respiratory syndrome-related coronavirus

Query: 2   YHTGLAL 8
           YH+GL L
Sbjct: 175 YHSGLPL 181


>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United

Query: 3   HTGLAL 8
           HTGLA+
Sbjct: 387 HTGLAI 392


>sp|CEP1_EBVG|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2   YHTGLALFK 10
           ++ GL+LFK
Sbjct: 181 WNEGLSLFK 189


>sp|CEP1_EBVB9|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2   YHTGLALFK 10
           ++ GL+LFK
Sbjct: 181 WNEGLSLFK 189


>sp|CEP1_EBVA8|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2   YHTGLALFK 10
           ++ GL+LFK
Sbjct: 181 WNEGLSLFK 189


>sp|VP1_POVWU|MAJOR capsid protein VP1|WU polyomavirus (WUPyV)

Query: 3   HTGLALF 9
           HTGL+ F
Sbjct: 278 HTGLSRF 284


>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)

Query: 1   GYHTGLALF 9
           G+++G +LF
Sbjct: 448 GFYSGASLF 456


>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1    GYHTGLAL 8
            G+H G+A 
Sbjct: 1062 GFHPGIAF 1069


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 1    GYHTGLAL 8
            GY  G+AL
Sbjct: 2214 GYMAGIAL 2221


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1    GYHTGLA 7
            GY TG+A
Sbjct: 1855 GYGTGVA 1861




13|SequenceR|70|61|LLYVKGYHTG

>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 2   LYVKGYHT 9
           +Y+ GYHT
Sbjct: 643 VYMGGYHT 650


Query: 3   YVKGYHT 9
           +VK YH+
Sbjct: 621 HVKNYHS 627


>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)

Query: 2    LYVKGYHTG 10
            L + GYH G
Sbjct: 1046 LRIYGYHKG 1054


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3    YVKGYHT 9
            Y  GYHT
Sbjct: 1029 YRPGYHT 1035


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3    YVKGYHT 9
            Y  GYHT
Sbjct: 1031 YRPGYHT 1037


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3    YVKGYHT 9
            Y  GYHT
Sbjct: 1031 YRPGYHT 1037


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 3    YVKGYHT 9
            Y  GYHT
Sbjct: 1031 YRPGYHT 1037


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3    YVKGYHT 9
            Y  GYHT
Sbjct: 1031 YRPGYHT 1037


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3    YVKGYHT 9
            Y  GYHT
Sbjct: 1031 YRPGYHT 1037


>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus

Query: 3   YVKGYHTG 10
           Y  GYH G
Sbjct: 402 YTLGYHGG 409


>sp|PG155_VARV|ENVELOPE protein OPG155|Variola virus

Query: 1  LLYVKGY 7
          LL+++GY
Sbjct: 18 LLFIQGY 24


>sp|PG155_VAR67|ENVELOPE protein OPG155|Variola virus (isolate Human/India/Ind3/1967)

Query: 1  LLYVKGY 7
          LL+++GY
Sbjct: 18 LLFIQGY 24


>sp|PG155_VACCC|ENVELOPE protein OPG155|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  LLYVKGY 7
          LL+++GY
Sbjct: 18 LLFIQGY 24


>sp|PG155_VACCA|ENVELOPE protein OPG155|Vaccinia virus (strain Ankara) (VACV)

Query: 1  LLYVKGY 7
          LL+++GY
Sbjct: 18 LLFIQGY 24


>sp|PG155_CWPXG|ENVELOPE protein OPG155|Cowpox virus (strain GRI-90 /

Query: 1  LLYVKGY 7
          LL+++GY
Sbjct: 18 LLFIQGY 24


>sp|PG155_CWPXB|ENVELOPE protein OPG155|Cowpox virus (strain Brighton Red)

Query: 1  LLYVKGY 7
          LL+++GY
Sbjct: 18 LLFIQGY 24


>sp|US11_HCMVT|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain Towne)

Query: 2   LYVKGY 7
           LYVKG+
Sbjct: 197 LYVKGW 202


>sp|US11_HCMVM|MEMBRANE glycoprotein US11|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   LYVKGY 7
           LYVKG+
Sbjct: 197 LYVKGW 202


>sp|US11_HCMVA|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain AD169)

Query: 2   LYVKGY 7
           LYVKG+
Sbjct: 197 LYVKGW 202


>sp|PG068_MONPV|PROTEIN OPG068|Monkeypox virus (MPXV)

Query: 1   LLYVKGYHT 9
           L YVK Y+T
Sbjct: 413 LYYVKEYNT 421


>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain

Query: 3   YVKGYH 8
           Y+K YH
Sbjct: 164 YLKAYH 169


>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 2    LYVKGYHTG 10
            L + GYH G
Sbjct: 1137 LGIYGYHKG 1145


>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 3   YVKGY 7
           Y+KGY
Sbjct: 771 YIKGY 775


>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2  LYVKGY 7
          LYV GY
Sbjct: 13 LYVAGY 18


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 4    VKGYH 8
            V+GYH
Sbjct: 1168 VRGYH 1172


>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 6   GYHTG 10
           GYH G
Sbjct: 260 GYHAG 264


>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)

Query: 3   YVKGYHT 9
           +VK YH+
Sbjct: 622 HVKNYHS 628


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 3   YVKGYHT 9
           +VK YH+
Sbjct: 620 HVKNYHS 626


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 3   YVKGYHT 9
           +VK YH+
Sbjct: 621 HVKNYHS 627


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 3   YVKGYHT 9
           +VK YH+
Sbjct: 621 HVKNYHS 627


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 3   YVKGYHT 9
           +VK YH+
Sbjct: 620 HVKNYHS 626


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 3   YVKGYHT 9
           +VK YH+
Sbjct: 620 HVKNYHS 626


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 3   YVKGYHT 9
           +VK YH+
Sbjct: 622 HVKNYHS 628


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 3   YVKGYHT 9
           +VK YH+
Sbjct: 622 HVKNYHS 628


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 3   YVKGYHT 9
           +VK YH+
Sbjct: 622 HVKNYHS 628


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 3   YVKGYHT 9
           +VK YH+
Sbjct: 620 HVKNYHS 626




14|SequenceR|75|66|NGQVDLLYVK

>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40

Query: 1   NGQVDLLY 8
           NG+++LLY
Sbjct: 128 NGEMNLLY 135


>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989

Query: 1   NGQVDLLYV 9
           NG+ D LY+
Sbjct: 187 NGKFDKLYI 195


>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986

Query: 1   NGQVDLLYV 9
           NG+ D LY+
Sbjct: 171 NGKFDKLYI 179


>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong

Query: 1   NGQVDLLYV 9
           NG+ D LY+
Sbjct: 187 NGKFDKLYI 195


>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41

Query: 1   NGQVDLLY 8
           NG ++LLY
Sbjct: 124 NGNMNLLY 131


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 1   NGQVDLLYV 9
           N  VD+LYV
Sbjct: 778 NRPVDVLYV 786


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 1   NGQVDLLYV 9
           N  VD+LYV
Sbjct: 778 NRPVDVLYV 786


>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980

Query: 1   NGQVDLLYV 9
           NG  D LY+
Sbjct: 187 NGNFDKLYI 195


>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)

Query: 3   QVDLLYVK 10
           Q D+LY K
Sbjct: 430 QTDVLYAK 437


>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979

Query: 1   NGQVDLLYV 9
           NG  D LY+
Sbjct: 171 NGNFDKLYI 179


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 4   VDLLYV 9
           VD+LYV
Sbjct: 783 VDILYV 788


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 3    QVDLLYVK 10
            +VDL +VK
Sbjct: 1704 EVDLTFVK 1711




15|SequenceR|80|71|FKQTINGQVD

>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind

Query: 1   FKQTINGQV 9
           FK+TING +
Sbjct: 351 FKKTINGLI 359


>sp|PHOSP_PI2H|PHOSPHOPROTEIN parainfluenza 2 virus (HPIV-2)

Query: 3   QTINGQVD 10
           QT+ G+VD
Sbjct: 237 QTVEGKVD 244


>sp|PHOSP_PI2HT|PHOSPHOPROTEIN parainfluenza 2 virus (strain

Query: 3   QTINGQVD 10
           QT+ G+VD
Sbjct: 237 QTVEGKVD 244


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 3   QTINGQVD 10
           QT+N QV+
Sbjct: 575 QTVNNQVN 582


>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 1   FKQTINGQ 8
           FKQ +NG+
Sbjct: 688 FKQQMNGE 695


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 2   KQTINGQVD 10
           +  ING+VD
Sbjct: 772 ESVINGEVD 780


>sp|VL2_HPV65|MINOR capsid protein L2|Human papillomavirus 65

Query: 1   FKQTINGQV 9
           F QT  GQ+
Sbjct: 333 FSQTDTGQI 341


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3    QTINGQVD 10
            + I+GQVD
Sbjct: 1218 EAIHGQVD 1225


>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)

Query: 2   KQTINGQ 8
           K T+NGQ
Sbjct: 514 KITVNGQ 520


>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3    QTINGQVD 10
            + I+GQVD
Sbjct: 1194 EAIHGQVD 1201


>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3    QTINGQVD 10
            + I+GQVD
Sbjct: 1190 EAIHGQVD 1197


>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3    QTINGQVD 10
            + I+GQVD
Sbjct: 1190 EAIHGQVD 1197


>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   KQTINGQVD 10
           KQT + QVD
Sbjct: 362 KQTRSSQVD 370


>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 2   KQTINGQVD 10
           K+T+  +VD
Sbjct: 517 KETVEAEVD 525




16|SequenceR|85|76|VPSVDFKQTI

>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2

Query: 1    VPSVDFKQT 9
            +P++DF+ T
Sbjct: 1056 IPAIDFEHT 1064


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 2    PSVDFKQTI 10
            PS+DF Q I
Sbjct: 1556 PSLDFAQAI 1564


>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)

Query: 1   VPSVDFKQTI 10
           +P++DF QT+
Sbjct: 538 LPNIDFLQTM 547


>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18

Query: 3   SVDFKQT 9
           SVD+KQT
Sbjct: 209 SVDYKQT 215


>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70

Query: 3   SVDFKQT 9
           SVD+KQT
Sbjct: 148 SVDYKQT 154


>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39

Query: 3   SVDFKQT 9
           SVD+KQT
Sbjct: 147 SVDYKQT 153


>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34

Query: 3   SVDFKQT 9
           SVD+KQT
Sbjct: 173 SVDYKQT 179


>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180

Query: 3   SVDFKQT 9
           SVD+KQT
Sbjct: 148 SVDYKQT 154


>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45

Query: 3   SVDFKQT 9
           SVD+KQT
Sbjct: 175 SVDYKQT 181


>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62

Query: 3   SVDFKQT 9
           SVD+KQT
Sbjct: 147 SVDYKQT 153


>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)

Query: 2   PSVDFKQTI 10
           P+V F+QT+
Sbjct: 245 PAVFFRQTL 253


>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61

Query: 3   SVDFKQT 9
           SVD+KQT
Sbjct: 149 SVDYKQT 155


>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)

Query: 2   PSVDFKQTI 10
           P+V F+QT+
Sbjct: 245 PAVFFRQTL 253


>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)

Query: 2   PSVDFKQTI 10
           P V F+QT+
Sbjct: 248 PKVFFRQTL 256


>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27

Query: 3   SVDFKQT 9
           S+D+KQT
Sbjct: 255 SMDYKQT 261


>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35

Query: 3   SVDFKQT 9
           S+D+KQT
Sbjct: 148 SMDYKQT 154


>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29

Query: 3   SVDFKQT 9
           +VD+KQT
Sbjct: 148 AVDYKQT 154


>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 1    VPSVDFKQ 8
            +P++DF+ 
Sbjct: 1073 IPAIDFEH 1080


>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 1    VPSVDFKQ 8
            +P++DF+ 
Sbjct: 1073 IPAIDFEH 1080


>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31

Query: 3   SVDFKQT 9
           S+D+KQT
Sbjct: 149 SMDYKQT 155


>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58

Query: 3   SVDFKQT 9
           S+D+KQT
Sbjct: 175 SMDYKQT 181


>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)

Query: 3    SVDFKQTI 10
            S DF QTI
Sbjct: 2044 STDFDQTI 2051


>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33

Query: 3   SVDFKQT 9
           S+D+KQT
Sbjct: 149 SMDYKQT 155


>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1    VPSVDFKQ 8
            +P++DF+ 
Sbjct: 1058 IPAIDFEH 1065


>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1    VPSVDFKQ 8
            +P++DF+ 
Sbjct: 1058 IPAIDFEH 1065


>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52

Query: 3   SVDFKQT 9
           S+D+KQT
Sbjct: 177 SMDYKQT 183


>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1    VPSVDFKQ 8
            +P++DF+ 
Sbjct: 1058 IPAIDFEH 1065


>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4

Query: 1    VPSVDFKQ 8
            +P++DF+ 
Sbjct: 1072 IPAIDFEH 1079


>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1    VPSVDFKQ 8
            +P++DF+ 
Sbjct: 1058 IPAIDFEH 1065


>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42

Query: 3   SVDFKQT 9
           S+D+KQT
Sbjct: 147 SMDYKQT 153


>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1    VPSVDFKQ 8
            +P++DF+ 
Sbjct: 1058 IPAIDFEH 1065


>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57

Query: 3   SVDFKQT 9
           S+D+KQT
Sbjct: 162 SMDYKQT 168


>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54

Query: 3   SVDFKQT 9
           S+D+KQT
Sbjct: 144 SMDYKQT 150


>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16

Query: 3   SVDFKQT 9
           S+D+KQT
Sbjct: 148 SMDYKQT 154


>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a

Query: 3   SVDFKQT 9
           S+D+KQT
Sbjct: 161 SMDYKQT 167




17|SequenceR|90|81|IQNIKVPSVD

>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)

Query: 1   IQNIKVPSVD 10
           I+NIK+PS++
Sbjct: 533 IKNIKMPSIE 542


>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   IQNIKVPSVD 10
           I+NIK+PS++
Sbjct: 533 IKNIKMPSIE 542


>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 2    QNIKVPSVD 10
            +NIK P +D
Sbjct: 1903 RNIKTPGID 1911


>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)

Query: 1   IQNIKVPSV 9
           IQN   PSV
Sbjct: 402 IQNTNSPSV 410


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 2    QNIKVP 7
            +NIKVP
Sbjct: 3370 ENIKVP 3375


>sp|CEP1_EBVG|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   IQNIKVPSV 9
           I+N K PS+
Sbjct: 121 IENAKSPSI 129


>sp|CEP1_EBVB9|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   IQNIKVPSV 9
           I+N K PS+
Sbjct: 121 IENAKSPSI 129


>sp|CEP1_EBVA8|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   IQNIKVPSV 9
           I+N K PS+
Sbjct: 121 IENAKSPSI 129


>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   IQNIKVPSVD 10
           +Q  K P+VD
Sbjct: 646 LQKQKTPAVD 655




18|SequenceR|95|86|SEDLSIQNIK

>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 2    EDLSIQNIK 10
            EDLSI+N++
Sbjct: 5119 EDLSIRNLQ 5127


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 2    EDLSIQNIK 10
            EDLSI+N++
Sbjct: 5139 EDLSIRNLQ 5147


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 2    EDLSIQNIK 10
            EDLSI+N++
Sbjct: 5169 EDLSIRNLQ 5177


>sp|VHR2_YMTV5|PROBABLE host range protein 2|Yaba monkey tumor virus (strain

Query: 1  SEDLSIQNIK 10
          +EDL+++NI+
Sbjct: 13 NEDLALKNIE 22


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1    SEDLSIQNI 9
            SED +I+NI
Sbjct: 6277 SEDGNIKNI 6285




19|SequenceR|100|91|GMHEGSEDLS

>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)

Query: 4  EGSEDLS 10
          +GSED+S
Sbjct: 81 DGSEDIS 87


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 2    MHEGSE 7
            MH GSE
Sbjct: 2972 MHSGSE 2977


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 2    MHEGSE 7
            MH GSE
Sbjct: 2977 MHSGSE 2982


>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2    MHEGSE 7
            MH GSE
Sbjct: 2999 MHSGSE 3004


>sp|AN_HHV6Z|ALKALINE nuclease|Human herpesvirus 6B (strain Z29)

Query: 4  EGSEDLS 10
          +GSED+S
Sbjct: 81 DGSEDVS 87


>sp|VCP_VACCC|COMPLEMENT control protein C3|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   GMHEGSEDL 9
           G H G ED 
Sbjct: 157 GRHNGYEDF 165


>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 1  GMHEGSEDLS 10
          G H GS+ LS
Sbjct: 22 GEHAGSQCLS 31


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1   GMHEGSE 7
           G H+GS+
Sbjct: 879 GFHKGSD 885


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 1   GMHEGSE 7
           G H+GS+
Sbjct: 879 GFHKGSD 885




20|SequenceR|105|96|DESCVGMHEG

>sp|UL10_HCMVA|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  DESCVGMHEG 10
          ++SCVG+  G
Sbjct: 60 NQSCVGISNG 69


>sp|UL10_HCMVM|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  DESCVGMHEG 10
          ++SCVG+  G
Sbjct: 60 NQSCVGIGNG 69


>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   SCVGMHEG 10
           +CVG H G
Sbjct: 189 ACVGEHHG 196


>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   SCVGMHEG 10
           +CVG H G
Sbjct: 189 ACVGEHHG 196


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 1    DESCVGMH 8
            DE C G H
Sbjct: 1976 DEYCYGGH 1983


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 1    DESCVGMH 8
            DE C G H
Sbjct: 1972 DEYCYGGH 1979


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 1    DESCVGMH 8
            DE C G H
Sbjct: 1976 DEYCYGGH 1983


>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45

Query: 3   SCVGMHEG 10
           +CVGM  G
Sbjct: 128 ACVGMEIG 135


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 2    ESCVGMH 8
            +SC+G H
Sbjct: 5949 KSCLGYH 5955


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 2    ESCVGMH 8
            +SC+G H
Sbjct: 5999 KSCLGYH 6005


>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985

Query: 1  DESCVGMH 8
          D  CVG H
Sbjct: 18 DTICVGYH 25


>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   SCVGMHEG 10
           +CVG H+ 
Sbjct: 186 NCVGEHQA 193


>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981

Query: 1  DESCVGMH 8
          D  CVG H
Sbjct: 18 DTICVGYH 25


>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   SCVGMHEG 10
           +CVG H+ 
Sbjct: 186 NCVGEHQA 193


>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976

Query: 1  DESCVGMH 8
          D  CVG H
Sbjct: 18 DTICVGYH 25


>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P

Query: 3   SCVGMH 8
           SC G+H
Sbjct: 342 SCSGLH 347


>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3   SCVGMHEG 10
           +CVG H+ 
Sbjct: 186 NCVGEHQA 193


>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3   SCVGMHEG 10
           +CVG H+ 
Sbjct: 186 NCVGEHQA 193


>sp|UL108_HCMVA|UNCHARACTERIZED protein UL108|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2  ESCVGMHE 9
          E+CV  HE
Sbjct: 79 EACVFEHE 86


>sp|E4RF3_ADE02|EARLY 4 ORF3 protein|Human adenovirus C serotype 2

Query: 1  DESCVGMHEG 10
          DE+ +GM EG
Sbjct: 37 DENYLGMVEG 46


>sp|E411_ADE05|PROBABLE early E4 11 kDa|Human adenovirus C serotype 5

Query: 1  DESCVGMHEG 10
          DE+ +GM EG
Sbjct: 37 DENYLGMVEG 46


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   SCVGMHEG 10
           +CVG H+ 
Sbjct: 191 NCVGDHQA 198


>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   SCVGMHEG 10
           +CVG H+ 
Sbjct: 191 NCVGDHQA 198


>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   SCVGMHEG 10
           +CVG H+ 
Sbjct: 191 NCVGDHQA 198


>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   SCVGMHEG 10
           +CVG H+ 
Sbjct: 189 NCVGDHQA 196


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   SCVGMHEG 10
           +CVG H+ 
Sbjct: 191 NCVGDHQA 198


>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   SCVGMHEG 10
           +CVG H+ 
Sbjct: 192 NCVGDHQA 199


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   SCVGMHEG 10
           +CVG H+ 
Sbjct: 191 NCVGDHQA 198


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   SCVGMHEG 10
           +CVG H+ 
Sbjct: 191 NCVGDHQA 198


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   SCVGMHEG 10
           +CVG H+ 
Sbjct: 191 NCVGDHQA 198


>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   SCVGMHEG 10
           +CVG H+ 
Sbjct: 186 NCVGDHQA 193


>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3   SCVGMHEG 10
           +CVG H+ 
Sbjct: 191 NCVGDHQA 198


>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United

Query: 5   VGMHEG 10
           +G+H+G
Sbjct: 312 IGLHDG 317


>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3   SCVGMHEG 10
           +CVG H+ 
Sbjct: 192 NCVGDHQA 199




21|SequenceR|110|101|VQVKGDESCV

>sp|VE8E2_HPV11|PROTEIN E8^E2C|Human papillomavirus 11

Query: 1   VQVKGDESCV 10
           VQ++GD +C+
Sbjct: 97  VQLQGDSNCL 106


>sp|VE2_HPV11|REGULATORY protein E2|Human papillomavirus 11

Query: 1   VQVKGDESCV 10
           VQ++GD +C+
Sbjct: 287 VQLQGDSNCL 296


>sp|VE8E2_HPV13|PROTEIN E8^E2C|Human papillomavirus 13

Query: 1   VQVKGDESCV 10
           VQ++GD +C+
Sbjct: 107 VQLQGDSNCL 116


>sp|VE2_HPV13|REGULATORY protein E2|Human papillomavirus 13

Query: 1   VQVKGDESCV 10
           VQ++GD +C+
Sbjct: 297 VQLQGDSNCL 306


>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55

Query: 1   VQVKGDESCV 10
           VQ++GD +C+
Sbjct: 298 VQLQGDPNCL 307


>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44

Query: 1   VQVKGDESCV 10
           VQ++GD +C+
Sbjct: 298 VQLQGDANCL 307


>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7

Query: 1   VQVKGDESCV 10
           +Q++GD +C+
Sbjct: 298 IQLEGDANCL 307


>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28

Query: 1   VQVKGDESCV 10
           V +KGD +C+
Sbjct: 298 VHLKGDPNCL 307


>sp|VE8E2_HPV51|PROTEIN E8^E2C|Human papillomavirus 51

Query: 1   VQVKGDESCV 10
           V +KGD +C+
Sbjct: 99  VHLKGDTNCL 108


>sp|VE2_HPV51|REGULATORY protein E2|Human papillomavirus 51

Query: 1   VQVKGDESCV 10
           V +KGD +C+
Sbjct: 285 VHLKGDTNCL 294


>sp|VE8E2_HPV28|PROTEIN E8^E2C|Human papillomavirus 28

Query: 1   VQVKGDESCV 10
           V +KGD +C+
Sbjct: 98  VHLKGDPNCL 107


>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69

Query: 1   VQVKGDESCV 10
           V +KGD +C+
Sbjct: 295 VHLKGDTNCL 304


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 3    VKGDESC 9
            V GDE C
Sbjct: 3901 VHGDEQC 3907


Query: 1   VQVKGDESCV 10
           +  +G ESC+
Sbjct: 972 ISKEGSESCI 981


>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)

Query: 1   VQVKGDESCV 10
           V  KG ESC+
Sbjct: 547 VSPKGQESCL 556


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 3    VKGDESCV 10
            V G ESC+
Sbjct: 1978 VDGSESCL 1985


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 4    KGDESCV 10
            K DE CV
Sbjct: 1346 KNDEECV 1352


Query: 3    VKGDESCV 10
            V G ESC+
Sbjct: 2015 VDGSESCL 2022


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 4    KGDESCV 10
            K DE CV
Sbjct: 1346 KNDEECV 1352


Query: 3    VKGDESCV 10
            V G ESC+
Sbjct: 2015 VDGSESCL 2022


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 3    VKGDESCV 10
            V G ESC+
Sbjct: 2008 VDGSESCL 2015


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 3    VKGDESCV 10
            V G ESC+
Sbjct: 2008 VDGSESCL 2015


>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)

Query: 4   KGDESC 9
           KGD++C
Sbjct: 221 KGDKTC 226


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 3    VKGDESCV 10
            V G ESC+
Sbjct: 1952 VDGSESCL 1959


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 3    VKGDESCV 10
            V G ESC+
Sbjct: 2021 VDGSESCL 2028


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 3    VKGDESCV 10
            V G ESC+
Sbjct: 2054 VDGSESCL 2061


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 3    VKGDESCV 10
            V G ESC+
Sbjct: 2055 VDGSESCL 2062


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 3    VKGDESCV 10
            V G ESC+
Sbjct: 2054 VDGSESCL 2061


>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)

Query: 3   VKGDESCV 10
           V G ESC+
Sbjct: 690 VDGSESCL 697


>sp|E434_ADE12|EARLY E4 34 kDa protein|Human adenovirus A serotype 12

Query: 2  QVKGDESCV 10
          +V+G  SCV
Sbjct: 51 EVRGIPSCV 59


>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1    VQVKGDESC 9
            +++KG++ C
Sbjct: 1096 LRIKGEDGC 1104


>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)

Query: 2    QVKGDESCV 10
            Q+KG  +C+
Sbjct: 1096 QIKGINTCL 1104


>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2    QVKGDESCV 10
            Q+KG  +C+
Sbjct: 1096 QIKGINTCL 1104


>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 2    QVKGDESCV 10
            Q+KG  +C+
Sbjct: 1088 QIKGINTCL 1096


>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)

Query: 2    QVKGDESCV 10
            Q+KG  +C+
Sbjct: 1096 QIKGINTCL 1104


>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a

Query: 1   VQVKGDESCV 10
           + ++GD +C+
Sbjct: 313 IHLRGDANCL 322


>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3

Query: 1   VQVKGDESCV 10
           + ++GD +C+
Sbjct: 305 IHLRGDPNCL 314


>sp|TRX2_HCMVM|TRIPLEX capsid protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4   KGDESCV 10
           KGD  CV
Sbjct: 104 KGDALCV 110


>sp|TRX2_HCMVA|TRIPLEX capsid protein 2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4   KGDESCV 10
           KGD  CV
Sbjct: 104 KGDALCV 110


>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27

Query: 1   VQVKGDESCV 10
           + ++GD +C+
Sbjct: 310 IHLRGDANCL 319




22|SequenceR|115|106|SYLGFVQVKG

>sp|PG137_VACCC|PROTEIN OPG137|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   LGFVQVKG 10
           LGF ++KG
Sbjct: 261 LGFEEIKG 268


>sp|PG137_VACCA|PROTEIN OPG137|Vaccinia virus (strain Ankara) (VACV)

Query: 3   LGFVQVKG 10
           LGF ++KG
Sbjct: 261 LGFEEIKG 268


>sp|PG137_MONPV|PROTEIN OPG137|Monkeypox virus (MPXV)

Query: 3   LGFVQVKG 10
           LGF ++KG
Sbjct: 261 LGFEEIKG 268


>sp|PG137_VARV|PROTEIN OPG137|Variola virus

Query: 3   LGFVQVKG 10
           LGF ++KG
Sbjct: 262 LGFDEIKG 269


>sp|PG137_VAR67|PROTEIN OPG137|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3   LGFVQVKG 10
           LGF ++KG
Sbjct: 262 LGFDEIKG 269


>sp|NP04_VZVO|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 1  SYLGFV 6
          S+LGFV
Sbjct: 38 SFLGFV 43


>sp|NP04_VZVD|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1  SYLGFV 6
          S+LGFV
Sbjct: 38 SFLGFV 43


>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   SYLGFVQVKG 10
           S+LGF+   G
Sbjct: 507 SFLGFLGAAG 516


>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   YLGFVQVKG 10
           Y G + +KG
Sbjct: 165 YFGHLNIKG 173


>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   YLGFVQVKG 10
           Y G + +KG
Sbjct: 165 YFGHLNIKG 173




23|SequenceR|120|111|HFEEGSYLGF

>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 3    EEGSYLGF 10
            EEG+ +GF
Sbjct: 2286 EEGATMGF 2293


>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)

Query: 2   FEEGSY 7
           FEEGS+
Sbjct: 107 FEEGSF 112


>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)

Query: 2  FEEGSYLGF 10
          FE+G+Y  F
Sbjct: 73 FEDGTYGSF 81


>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)

Query: 2  FEEGSYLGF 10
          FE+G+Y  F
Sbjct: 73 FEDGTYGSF 81


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 3    EEGSYLGF 10
            EEG+ +GF
Sbjct: 2290 EEGATIGF 2297


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 3    EEGSYLGF 10
            EEG+ +GF
Sbjct: 2290 EEGATIGF 2297


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 5    GSYLGF 10
            GS+LGF
Sbjct: 2087 GSFLGF 2092


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 5    GSYLGF 10
            GS+LGF
Sbjct: 2087 GSFLGF 2092


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    HFEEGS 6
            HF+EG+
Sbjct: 4525 HFDEGN 4530


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    HFEEGS 6
            HF+EG+
Sbjct: 4502 HFDEGN 4507


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 5    GSYLGF 10
            GSY+G+
Sbjct: 3357 GSYIGY 3362


>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)

Query: 2   FEEGSYL 8
           FEE SYL
Sbjct: 599 FEEISYL 605


>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United

Query: 1   HFEEGSYLGF 10
           H+ +G+  GF
Sbjct: 434 HYRQGACAGF 443


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 1   HFEEGSY 7
           H E GSY
Sbjct: 199 HLEFGSY 205


>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus

Query: 3   EEGSYLG 9
           +EG Y+G
Sbjct: 770 DEGEYIG 776


>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human

Query: 3   EEGSYLG 9
           +EG Y+G
Sbjct: 771 DEGEYIG 777


>sp|UL92_HHV8P|PROTEIN ORF31|Human herpesvirus 8 type P

Query: 1  HFEEGSYLG 9
          + +EG +LG
Sbjct: 56 NIQEGQFLG 64




24|SequenceR|125|116|CDFTEHFEEG

>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P

Query: 3   FTEHFEE 9
           FTE FEE
Sbjct: 385 FTEPFEE 391


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2    DFTEHF 7
            D TEHF
Sbjct: 1617 DITEHF 1622


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2    DFTEHF 7
            D TEHF
Sbjct: 1615 DITEHF 1620


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2    DFTEHF 7
            D TEHF
Sbjct: 1617 DITEHF 1622


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2    DFTEHF 7
            D TEHF
Sbjct: 1617 DITEHF 1622


>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23

Query: 2   DFTEHFEE 9
           +FT H EE
Sbjct: 368 EFTRHVEE 375


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    CDFTEHFEEG 10
            C F E  EEG
Sbjct: 4423 CRFQEKDEEG 4432


Query: 6    HFEEG 10
            HF+EG
Sbjct: 4502 HFDEG 4506


>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2    DFTEHFEEG 10
            DF  +F EG
Sbjct: 1393 DFRVYFREG 1401


>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)

Query: 2   DFTEHFEE 9
           DFT HF +
Sbjct: 887 DFTGHFRK 894


>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human

Query: 2   DFTEHFEE 9
           DF  H EE
Sbjct: 368 DFLRHTEE 375


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2    DFTEHF 7
            D T+HF
Sbjct: 1617 DITQHF 1622


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 2   DFTEHF 7
           +FT HF
Sbjct: 646 EFTRHF 651


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 2   DFTEHF 7
           +FT HF
Sbjct: 646 EFTRHF 651


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 2   DFTEHF 7
           +FT HF
Sbjct: 646 EFTRHF 651


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 2   DFTEHF 7
           +FT HF
Sbjct: 646 EFTRHF 651


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 2   DFTEHF 7
           +FT HF
Sbjct: 646 EFTRHF 651


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 3    FTEHFEE 9
            F EH+ E
Sbjct: 3190 FVEHYNE 3196


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2    DFTEHF 7
            D T+HF
Sbjct: 1451 DITQHF 1456


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2    DFTEHF 7
            D T+HF
Sbjct: 1617 DITQHF 1622


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2    DFTEHF 7
            D T+HF
Sbjct: 1617 DITQHF 1622


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2    DFTEHF 7
            D T+HF
Sbjct: 1617 DITQHF 1622


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2    DFTEHF 7
            D T+HF
Sbjct: 1617 DITQHF 1622


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3    FTEHFEE 9
            F EH+ E
Sbjct: 3190 FVEHYNE 3196


>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   DFTEHFEEG 10
           DF +H E G
Sbjct: 313 DFLKHIEFG 321


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 6    HFEEG 10
            HF+EG
Sbjct: 4525 HFDEG 4529


>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)

Query: 2   DFTEHFEEG 10
           DF +H E G
Sbjct: 313 DFLKHIEFG 321


>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   DFTEHF 7
           DF EHF
Sbjct: 586 DFREHF 591


>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   DFTEHF 7
           DF EHF
Sbjct: 586 DFREHF 591




25|SequenceR|130|121|IIKIPCDFTE

>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 1   IIKIPCDFT 9
           I+K+PC+FT
Sbjct: 438 IVKVPCEFT 446


>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)

Query: 2   IKIPCDFT 9
           IKIP +FT
Sbjct: 792 IKIPTNFT 799


>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 1    IIKIPC 6
            +IKIPC
Sbjct: 1333 LIKIPC 1338


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1    IIKIPCDFT 9
            ++K+P D T
Sbjct: 6746 VVKVPIDLT 6754


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 4   IPCDFT 9
           +PC FT
Sbjct: 676 LPCSFT 681


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 4   IPCDFT 9
           +PC FT
Sbjct: 677 LPCSFT 682


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 4   IPCDFT 9
           +PC FT
Sbjct: 683 LPCSFT 688


Query: 2    IKIPC 6
            +KIPC
Sbjct: 2118 LKIPC 2122


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4   IPCDFT 9
           +PC FT
Sbjct: 675 LPCSFT 680


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 4   IPCDFT 9
           +PC FT
Sbjct: 681 LPCSFT 686


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 4   IPCDFT 9
           +PC FT
Sbjct: 681 LPCSFT 686


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 4   IPCDFT 9
           +PC FT
Sbjct: 679 LPCSFT 684


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 4   IPCDFT 9
           +PC FT
Sbjct: 675 LPCSFT 680


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 4   IPCDFT 9
           +PC FT
Sbjct: 675 LPCSFT 680


>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)

Query: 4   IPCDFT 9
           +PC FT
Sbjct: 675 LPCSFT 680


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 4   IPCDFT 9
           +PC FT
Sbjct: 675 LPCSFT 680


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 4   IPCDFT 9
           +PC FT
Sbjct: 675 LPCSFT 680


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 4   IPCDFT 9
           +PC FT
Sbjct: 673 LPCSFT 678


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4   IPCDFT 9
           +PC FT
Sbjct: 675 LPCSFT 680


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4   IPCDFT 9
           +PC FT
Sbjct: 675 LPCSFT 680


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4   IPCDFT 9
           +PC FT
Sbjct: 675 LPCSFT 680


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4   IPCDFT 9
           +PC FT
Sbjct: 675 LPCSFT 680


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 4   IPCDFT 9
           +PC FT
Sbjct: 676 LPCSFT 681


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4   IPCDFT 9
           +PC FT
Sbjct: 675 LPCSFT 680


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 4   IPCDFT 9
           +PC FT
Sbjct: 676 LPCSFT 681


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4   IPCDFT 9
           +PC FT
Sbjct: 675 LPCSFT 680


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 4   IPCDFT 9
           +PC FT
Sbjct: 675 LPCSFT 680


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 4   IPCDFT 9
           +PC FT
Sbjct: 680 LPCSFT 685


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 3    KIPCDFTE 10
            K+PC F +
Sbjct: 1085 KLPCQFKD 1092


>sp|CAPSD_HCYV5|CAPSID protein|Human associated cyclovirus 1 (isolate

Query: 5  PCDFTE 10
          P DFTE
Sbjct: 61 PSDFTE 66


>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P

Query: 3   KIPCDFTE 10
           + P DFTE
Sbjct: 144 ETPLDFTE 151


>sp|GL_HHV1K|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain KOS)

Query: 1  IIKIPC 6
          I+K+PC
Sbjct: 39 ILKVPC 44


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 3    KIPCDFTE 10
            K+PC F +
Sbjct: 1085 KLPCQFKD 1092


>sp|GL_HHV11|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain 17)

Query: 1  IIKIPC 6
          I+K+PC
Sbjct: 39 ILKVPC 44


>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 2   IKIPCDFT 9
           I+IP +FT
Sbjct: 790 IQIPSEFT 797


>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)

Query: 2   IKIPCDFT 9
           I+IP +FT
Sbjct: 788 IQIPTNFT 795


>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)

Query: 2   IKIPCDFT 9
           I+IP +FT
Sbjct: 788 IQIPTNFT 795


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1   IIKIPC 6
           ++K+PC
Sbjct: 365 VVKMPC 370


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1   IIKIPC 6
           ++K+PC
Sbjct: 365 VVKMPC 370


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2    IKIPCDF 8
            +KIPC  
Sbjct: 2114 LKIPCQL 2120


>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2   IKIPC 6
           IK+PC
Sbjct: 421 IKLPC 425


>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 3   KIPCDFT 9
           K+P DFT
Sbjct: 424 KLPDDFT 430




26|SequenceR|135|126|HPHVAIIKIP

>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)

Query: 2    PHVAIIK 8
            PH+A+IK
Sbjct: 1075 PHIAVIK 1081


>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)

Query: 2    PHVAIIK 8
            PH+A+IK
Sbjct: 1075 PHIAVIK 1081


>sp|NCAP_DUGBV|NUCLEOPROTEIN virus

Query: 1   HPHVAIIKIP 10
           HP VA  K+P
Sbjct: 150 HPVVAEYKVP 159


>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)

Query: 1   HPHVAIIKIP 10
           HP VA  K+P
Sbjct: 150 HPVVAEYKVP 159


>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)

Query: 2   PHVAIIK 8
           PH+A++K
Sbjct: 903 PHLAVVK 909


>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)

Query: 2   PHVAIIKI 9
           PH A IK+
Sbjct: 522 PHAATIKV 529


>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 3  HVAIIK 8
          HVAIIK
Sbjct: 21 HVAIIK 26


>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7

Query: 1   HPHVAIIKIP 10
           H  +A+IK P
Sbjct: 550 HKSLAVIKCP 559


>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   HPHVAIIKI 9
           HPH+  +K+
Sbjct: 544 HPHLEEVKV 552


>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   HPHVAIIKI 9
           HPH+  +K+
Sbjct: 544 HPHLEEVKV 552


>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32

Query: 1  HPHVAIIKIP 10
          HP+  I K P
Sbjct: 47 HPYYTIKKTP 56


>sp|ETF1_VARV|EARLY transcription factor 70 kDa|Variola virus

Query: 2   PHVAIIKI 9
           PH +I+K+
Sbjct: 534 PHPSIVKV 541


>sp|ETF1_VAR67|EARLY transcription factor 70 kDa|Variola virus (isolate

Query: 2   PHVAIIKI 9
           PH +I+K+
Sbjct: 534 PHPSIVKV 541


>sp|ETF1_VACCT|EARLY transcription factor 70 kDa|Vaccinia virus (strain Tian Tan)

Query: 2   PHVAIIKI 9
           PH +I+K+
Sbjct: 534 PHPSIVKV 541


>sp|ETF1_VACCC|EARLY transcription factor 70 kDa|Vaccinia virus (strain Copenhagen)

Query: 2   PHVAIIKI 9
           PH +I+K+
Sbjct: 534 PHPSIVKV 541


>sp|ETF1_VACCA|EARLY transcription factor 70 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 2   PHVAIIKI 9
           PH +I+K+
Sbjct: 534 PHPSIVKV 541


>sp|ETF1_MONPV|EARLY transcription factor 70 kDa|Monkeypox virus (MPXV)

Query: 2   PHVAIIKI 9
           PH +I+K+
Sbjct: 534 PHPSIVKV 541


>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   HPHVAIIKI 9
           HPH+  +K+
Sbjct: 544 HPHLEEVKV 552


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 2   PHVAIIKIP 10
           PH  + KIP
Sbjct: 689 PHKMLSKIP 697


>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40

Query: 4   VAIIKIP 10
           +AI+KIP
Sbjct: 351 LAIVKIP 357


>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40

Query: 1   HPHVAIIKIP 10
           H  +A+IK P
Sbjct: 551 HKPLAVIKCP 560


>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59

Query: 1   HPHVAIIKIP 10
           H H+  IK P
Sbjct: 545 HRHLVQIKCP 554


>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34

Query: 1   HPHVAIIKIP 10
           H H+  IK P
Sbjct: 549 HKHLLQIKCP 558




27|SequenceR|140|131|SSRVFHPHVA

>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)

Query: 2   SRVFHPHV 9
           SR+F PHV
Sbjct: 791 SRMFIPHV 798


>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])

Query: 2   SRVFHPHV 9
           SR+F PHV
Sbjct: 791 SRMFIPHV 798


>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])

Query: 2   SRVFHPHV 9
           SR+F PHV
Sbjct: 791 SRMFIPHV 798


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 1   SSRVFHPHV 9
           +SRVF P++
Sbjct: 577 TSRVFKPYI 585


>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])

Query: 2   SRVFHPHV 9
           SR+F PH+
Sbjct: 791 SRMFIPHI 798


>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)

Query: 2   SRVFHPHV 9
           SR+F PH+
Sbjct: 791 SRMFIPHI 798


>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])

Query: 2   SRVFHPHV 9
           SR+F PH+
Sbjct: 791 SRMFIPHI 798


>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United

Query: 2   SRVFHPHV 9
           SR+F PH+
Sbjct: 791 SRMFIPHI 798


>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])

Query: 2   SRVFHPHV 9
           SR+F PH+
Sbjct: 791 SRMFIPHI 798


>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])

Query: 2   SRVFHPHV 9
           SR+F PH+
Sbjct: 791 SRMFIPHI 798


>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3

Query: 1   SSRVFHPHVA 10
           S +V HPH++
Sbjct: 127 SLKVEHPHIS 136


>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)

Query: 2   SRVFHPHV 9
           SR+F PH+
Sbjct: 791 SRMFIPHI 798


>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])

Query: 2   SRVFHPHV 9
           SR+F PH+
Sbjct: 791 SRMFIPHI 798


>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)

Query: 2   SRVFHPHV 9
           SR+F PH+
Sbjct: 791 SRMFIPHI 798


>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)

Query: 2   SRVFHPHV 9
           SR+F PH+
Sbjct: 791 SRMFIPHI 798


>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])

Query: 2   SRVFHPHV 9
           SR+F PH+
Sbjct: 791 SRMFIPHI 798


>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United

Query: 2   SRVFHPHV 9
           SR+F PH+
Sbjct: 791 SRMFIPHI 798


>sp|US33_HCMVA|UNCHARACTERIZED protein HHLF3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  SSRVFHPH 8
          S RV HPH
Sbjct: 87 SQRVMHPH 94


>sp|US07_HCMVA|UNIQUE short US7 glycoprotein|Human cytomegalovirus (strain AD169)

Query: 5  FHPHVA 10
          F+PH+A
Sbjct: 80 FNPHIA 85


>sp|US07_HCMVM|MEMBRANE glycoprotein US7|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5  FHPHVA 10
          F+PH+A
Sbjct: 80 FNPHIA 85


>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain

Query: 6  HPHV 9
          HPHV
Sbjct: 39 HPHV 42


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 4   VFHPHV 9
           V HPH+
Sbjct: 879 VLHPHL 884


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 4   VFHPHV 9
           V HPH+
Sbjct: 879 VLHPHL 884


>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)

Query: 4   VFHPHV 9
           V HPHV
Sbjct: 429 VDHPHV 434


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 4   VFHPHV 9
           + HPH+
Sbjct: 883 ILHPHL 888




28|SequenceR|145|136|VFQKCSSRVF

>sp|ICP27_HHV2H|MRNA export factor|Human herpesvirus 2 (strain HG52)

Query: 3   QKCSSRV 9
           Q+CSSRV
Sbjct: 481 QECSSRV 487


>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)

Query: 3   QKCSSRV 9
           Q+CSSRV
Sbjct: 480 QECSSRV 486


>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)

Query: 3   QKCSSRV 9
           Q+CSSRV
Sbjct: 481 QECSSRV 487


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 1   VFQKCSSRV 9
           VF++C SR+
Sbjct: 899 VFEECMSRI 907


>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 3   QKCSSRVF 10
           + C+SRV+
Sbjct: 713 ETCTSRVY 720


>sp|M2_I96A2|MATRIX protein 2|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 1  VFQKCSSRVF 10
          +F KC  R+F
Sbjct: 46 LFFKCIYRIF 55


>sp|VLTF3_VARV|VIRAL late gene transcription factor|Variola virus

Query: 1  VFQKCS 6
          VFQKC+
Sbjct: 29 VFQKCT 34


>sp|VLTF3_VAR67|VIRAL late gene transcription factor|Variola virus (isolate

Query: 1  VFQKCS 6
          VFQKC+
Sbjct: 29 VFQKCT 34


>sp|VLTF3_VACCC|VIRAL late gene transcription factor|Vaccinia virus (strain Copenhagen)

Query: 1  VFQKCS 6
          VFQKC+
Sbjct: 29 VFQKCT 34


>sp|VLTF3_VACCA|VIRAL late gene transcription factor|Vaccinia virus (strain Ankara)

Query: 1  VFQKCS 6
          VFQKC+
Sbjct: 29 VFQKCT 34


>sp|VLTF3_MONPV|VIRAL late gene transcription factor|Monkeypox virus (MPXV)

Query: 1  VFQKCS 6
          VFQKC+
Sbjct: 29 VFQKCT 34


>sp|UL88_HHV6U|PROTEIN U59|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   VFQKCS 6
           +FQKC+
Sbjct: 187 IFQKCA 192


>sp|UL88_HHV6Z|PROTEIN U59|Human herpesvirus 6B (strain Z29)

Query: 1   VFQKCS 6
           +FQKC+
Sbjct: 187 IFQKCA 192




29|SequenceR|150|141|KKGGTVFQKC

>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40

Query: 4   GTVFQK 9
           GT+FQK
Sbjct: 741 GTIFQK 746


>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41

Query: 1   KKGGTVFQK 9
           ++ GTVFQ+
Sbjct: 744 QRRGTVFQR 752


>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 3    GGTVFQK 9
            GG+VFQ+
Sbjct: 2165 GGSVFQE 2171


>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)

Query: 3    GGTVFQK 9
            GG+VFQ+
Sbjct: 2164 GGSVFQE 2170


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 3    GGTVFQK 9
            GG+VFQ+
Sbjct: 2164 GGSVFQE 2170


>sp|VLTF3_VARV|VIRAL late gene transcription factor|Variola virus

Query: 5  TVFQKC 10
          +VFQKC
Sbjct: 28 SVFQKC 33


>sp|VLTF3_VAR67|VIRAL late gene transcription factor|Variola virus (isolate

Query: 5  TVFQKC 10
          +VFQKC
Sbjct: 28 SVFQKC 33


>sp|VLTF3_VACCC|VIRAL late gene transcription factor|Vaccinia virus (strain Copenhagen)

Query: 5  TVFQKC 10
          +VFQKC
Sbjct: 28 SVFQKC 33


>sp|VLTF3_VACCA|VIRAL late gene transcription factor|Vaccinia virus (strain Ankara)

Query: 5  TVFQKC 10
          +VFQKC
Sbjct: 28 SVFQKC 33


>sp|VLTF3_MONPV|VIRAL late gene transcription factor|Monkeypox virus (MPXV)

Query: 5  TVFQKC 10
          +VFQKC
Sbjct: 28 SVFQKC 33


>sp|UL06_HCMVM|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   GGTVFQK 9
           GGT +QK
Sbjct: 149 GGTYYQK 155


>sp|UL06_HCMVA|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   GGTVFQK 9
           GGT +QK
Sbjct: 153 GGTYYQK 159


>sp|EP84_HCMVM|EARLY phosphoprotein p84|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   KGGTVFQK 9
           +GG VF K
Sbjct: 97  RGGIVFNK 104


>sp|EP84_HCMVA|EARLY phosphoprotein p84|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   KGGTVFQK 9
           +GG VF K
Sbjct: 97  RGGIVFNK 104




30|SequenceR|155|146|EFLLLKKGGT

>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)

Query: 1   EFLLLKKGGT 10
           +FLL + GGT
Sbjct: 592 DFLLTRWGGT 601


>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)

Query: 1   EFLLLKKGGT 10
           +FLL + GGT
Sbjct: 592 DFLLTRWGGT 601


>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1   EFLLLKKGGT 10
           +FLL + GGT
Sbjct: 592 DFLLTRWGGT 601


>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1   EFLLLKKGGT 10
           +FLL + GGT
Sbjct: 592 DFLLTRWGGT 601


>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1   EFLLLKKGGT 10
           +FLL + GGT
Sbjct: 592 DFLLARWGGT 601


>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote

Query: 1   EFLLLKKGGT 10
           +FLL + GGT
Sbjct: 591 DFLLQRWGGT 600


>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 1   EFLLLKKGGT 10
           +FLL + GGT
Sbjct: 591 DFLLQRWGGT 600


>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 1   EFLLLKKGGT 10
           +FLL + GGT
Sbjct: 591 DFLLQRWGGT 600


>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1   EFLLLKKGGT 10
           +FLL + GGT
Sbjct: 591 DFLLRRWGGT 600


>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 1   EFLLLKKGGT 10
           +FLL + GGT
Sbjct: 591 DFLLRRWGGT 600


>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)

Query: 1   EFLLLKKGGT 10
           +FLL + GGT
Sbjct: 591 DFLLRRWGGT 600


>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)

Query: 1   EFLLLKKGGT 10
           +FLL + GGT
Sbjct: 592 DFLLQRWGGT 601


>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 1   EFLLLKKGGT 10
           +FLL + GGT
Sbjct: 592 DFLLQRWGGT 601


>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 1   EFLLLKKGGT 10
           +FLL + GGT
Sbjct: 592 DFLLQRWGGT 601


>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)

Query: 1   EFLLLKKGGT 10
           +FLL + GGT
Sbjct: 591 DFLLQRWGGT 600


>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)

Query: 1   EFLLLKKGGT 10
           +FLL + GGT
Sbjct: 591 DFLLQRWGGT 600


>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5

Query: 1   EFLLLKKGG 9
           +FLL ++GG
Sbjct: 473 DFLLWEQGG 481


>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2

Query: 1   EFLLLKKGG 9
           +FLL ++GG
Sbjct: 473 DFLLWEQGG 481


>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain

Query: 2    FLLLKKGGT 10
            FLL+  GGT
Sbjct: 1175 FLLIYLGGT 1183


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 3    LLLKKGGT 10
            L+LK GGT
Sbjct: 2059 LILKCGGT 2066


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 3    LLLKKGGT 10
            L+LK GGT
Sbjct: 2059 LILKCGGT 2066


>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)

Query: 1   EFLLLKKGG 9
           ++LL K+GG
Sbjct: 377 KYLLKKEGG 385


>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain

Query: 1   EFLLLKKGG 9
           ++LL K+GG
Sbjct: 386 KYLLKKEGG 394


>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)

Query: 1   EFLLLKKGG 9
           ++LL K+GG
Sbjct: 386 KYLLKKEGG 394


>sp|UL76_HCMVM|PROTEIN UL76|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   EFLLLKKGG 9
           +FL L +GG
Sbjct: 139 DFLRLPRGG 147


>sp|UL76_HCMVA|PROTEIN UL76|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   EFLLLKKGG 9
           +FL L +GG
Sbjct: 139 DFLRLPRGG 147


>sp|VU25_HHV7J|PROTEIN U25|Human herpesvirus 7 (strain JI)

Query: 1  EFLLLKKG 8
          EF+L K+G
Sbjct: 18 EFILSKEG 25




31|SequenceR|160|151|NMWSREFLLL

>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 2   MWSREFLL 9
           MWSR+ L+
Sbjct: 915 MWSRDLLV 922


>sp|VP30_MABVR|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ravn-87)

Query: 1   NMWSREFLLL 10
           N+ +RE LLL
Sbjct: 100 NLTNRELLLL 109


>sp|VP30_MABVP|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Popp-67)

Query: 1   NMWSREFLLL 10
           N+ +RE LLL
Sbjct: 100 NLTNRELLLL 109


>sp|VP30_MABVO|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1   NMWSREFLLL 10
           N+ +RE LLL
Sbjct: 100 NLTNRELLLL 109


>sp|VP30_MABVM|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1   NMWSREFLLL 10
           N+ +RE LLL
Sbjct: 100 NLTNRELLLL 109


>sp|VP30_MABVA|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1   NMWSREFLLL 10
           N+ +RE LLL
Sbjct: 100 NLTNRELLLL 109


>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 2   MWSREFL 8
           +W+RE L
Sbjct: 788 VWARELL 794


>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain

Query: 3   WSREFL 8
           W REF+
Sbjct: 200 WCREFV 205


>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate

Query: 3   WSREFL 8
           W REF+
Sbjct: 200 WCREFV 205


>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)

Query: 2   MWSREFLLL 10
           +W R F +L
Sbjct: 577 LWCRHFCVL 585


>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)

Query: 2   MWSREFLLL 10
           +W R F +L
Sbjct: 577 LWCRHFCVL 585


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 3   WSREF 7
           WS+EF
Sbjct: 352 WSQEF 356


>sp|NS12_CVHN5|NON-STRUCTURAL protein 4|Human coronavirus HKU1 (isolate N5)

Query: 1  NMWSREF 7
          N+W R+F
Sbjct: 44 NVWCRKF 50


>sp|NS12_CVHN2|NON-STRUCTURAL protein 4|Human coronavirus HKU1 (isolate N2)

Query: 1  NMWSREF 7
          N+W R+F
Sbjct: 44 NVWCRKF 50


>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)

Query: 2   MWSREFLLL 10
           +W R F +L
Sbjct: 577 LWCRHFCVL 585


>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)

Query: 2   MWSREFLLL 10
           +W R F +L
Sbjct: 577 LWCRHFCVL 585


>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)

Query: 2   MWSREFLLL 10
           +W R F +L
Sbjct: 577 LWCRHFCVL 585


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 3   WSREFLLL 10
           W++ FL+L
Sbjct: 368 WAKVFLVL 375


>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 2   MWSREFLLL 10
           +W R F +L
Sbjct: 577 LWCRHFCVL 585


>sp|NS12_CVHN1|NON-STRUCTURAL protein 4|Human coronavirus HKU1 (isolate N1)

Query: 1  NMWSREF 7
          N+W R+F
Sbjct: 44 NVWCRKF 50




32|SequenceR|165|156|ASKWRNMWSR

>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])

Query: 4    WRNMWS 9
            W+ MWS
Sbjct: 1067 WKKMWS 1072


>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 4   WRNMWSR 10
           W ++WSR
Sbjct: 908 WASLWSR 914


>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4   WRNMWSR 10
           W ++WSR
Sbjct: 908 WASLWSR 914


>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4   WRNMWSR 10
           W ++WSR
Sbjct: 908 WASLWSR 914


>sp|KITH_HHV2H|THYMIDINE kinase|Human herpesvirus 2 (strain HG52)

Query: 3   KWRNMWSR 10
           +WR  W R
Sbjct: 255 RWREDWGR 262


>sp|KITH_HHV23|THYMIDINE kinase|Human herpesvirus 2 (strain 333)

Query: 3   KWRNMWSR 10
           +WR  W R
Sbjct: 255 RWREDWGR 262


>sp|ICP0_HHV11|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 1 (strain 17)

Query: 1   ASKWRNMW 8
           AS+W ++W
Sbjct: 725 ASEWNSLW 732


>sp|VP7_ROTGI|OUTER capsid glycoprotein VP7|Rotavirus B (isolate RVB/Rat/United

Query: 4   WRNMWS 9
           W N+WS
Sbjct: 215 WGNVWS 220


>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8])

Query: 4    WRNMWS 9
            W+ MW+
Sbjct: 1067 WKKMWN 1072


>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 4    WRNMWS 9
            W+ MW+
Sbjct: 1067 WKKMWN 1072


>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)

Query: 1   ASKWRNMW 8
           AS+W ++W
Sbjct: 770 ASEWNSLW 777


>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 4    WRNMWS 9
            W+ MW+
Sbjct: 1067 WKKMWN 1072


>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 4    WRNMWS 9
            W+ MW+
Sbjct: 1067 WKKMWN 1072


>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])

Query: 4    WRNMWS 9
            W+ MW+
Sbjct: 1067 WKKMWN 1072


>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 4    WRNMWS 9
            W+ MW+
Sbjct: 1067 WKKMWN 1072


>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United

Query: 4    WRNMWS 9
            W+ MW+
Sbjct: 1067 WKKMWN 1072


>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1   ASKWRNMW 8
           AS WR++W
Sbjct: 824 ASAWRDLW 831


>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 4    WRNMWS 9
            W+ MW+
Sbjct: 1067 WKKMWN 1072


>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate

Query: 4    WRNMWS 9
            W+ MW+
Sbjct: 1067 WKKMWN 1072


>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 4    WRNMWS 9
            W+ MW+
Sbjct: 1067 WKKMWN 1072


>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4])

Query: 4    WRNMWS 9
            W+ MW+
Sbjct: 1067 WKKMWN 1072


>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 4    WRNMWS 9
            W+ MW+
Sbjct: 1067 WKKMWN 1072


>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United

Query: 4    WRNMWS 9
            W+ MW+
Sbjct: 1067 WKKMWN 1072


>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3   KWRNMWS 9
           KW+N+W+
Sbjct: 658 KWQNLWT 664


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 5    RNMWS 9
            RNMWS
Sbjct: 2053 RNMWS 2057


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5    RNMWS 9
            RNMWS
Sbjct: 2053 RNMWS 2057


>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40

Query: 2  SKWRNMWSR 10
          S  RN+W+R
Sbjct: 23 SPLRNIWNR 31


>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)

Query: 1   ASKWRNMWSR 10
            S+W+  W R
Sbjct: 249 GSEWQEYWMR 258


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 2   SKWRNMWSR 10
           + W++ W R
Sbjct: 125 TTWQHTWPR 133


>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3   KWRNMWS 9
           KW N+W+
Sbjct: 653 KWENLWN 659


>sp|VP7_ROTGA|OUTER capsid glycoprotein VP7|Rotavirus B (isolate

Query: 4   WRNMWS 9
           W N+WS
Sbjct: 217 WGNVWS 222


>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United

Query: 4    WRNMWS 9
            WR +W+
Sbjct: 1069 WRMLWN 1074


>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)

Query: 2    SKWRNMWSR 10
            ++W  +W R
Sbjct: 1734 AEWDEVWGR 1742


>sp|RIR2_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 8 type P

Query: 4  WRNMW 8
          W+N W
Sbjct: 24 WQNRW 28


>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)

Query: 2    SKWRNMWSR 10
            ++W  +W R
Sbjct: 1764 AEWDEVWGR 1772


>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3   KWRNMWS 9
           KW N+W+
Sbjct: 668 KWANLWN 674


>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3   KWRNMWS 9
           KW N+W+
Sbjct: 657 KWTNLWN 663


>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3   KWRNMWS 9
           KW N+W+
Sbjct: 659 KWDNLWN 665


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate

Query: 2   SKWRNMWS 9
           S W+ +WS
Sbjct: 923 SFWKEIWS 930


>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3   KWRNMWS 9
           KW N+W+
Sbjct: 659 KWTNLWN 665


>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7

Query: 5  RNMWSR 10
          RN+W+R
Sbjct: 8  RNIWNR 13


>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3   KWRNMWS 9
           KW N+W+
Sbjct: 665 KWANLWN 671


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 2   SKWRNMW 8
           S WR +W
Sbjct: 923 SFWREIW 929


>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3   KWRNMWS 9
           KW N+W+
Sbjct: 674 KWANLWN 680


>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2

Query: 5  RNMWSR 10
          RN+W+R
Sbjct: 26 RNIWNR 31


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 2   SKWRNMW 8
           S WR +W
Sbjct: 923 SFWREIW 929


>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42

Query: 3   KWRNMWSR 10
           KW+ ++SR
Sbjct: 569 KWKYLYSR 576


>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5

Query: 5  RNMWSR 10
          RN+W+R
Sbjct: 26 RNIWNR 31


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 2   SKWRNMW 8
           S WR +W
Sbjct: 923 SFWREIW 929


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 2   SKWRNMW 8
           S WR +W
Sbjct: 923 SFWREIW 929


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 2   SKWRNMW 8
           S WR +W
Sbjct: 923 SFWREIW 929


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 2   SKWRNMW 8
           S WR +W
Sbjct: 923 SFWREIW 929


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 2   SKWRNMW 8
           S WR +W
Sbjct: 923 SFWREIW 929


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 2   SKWRNMW 8
           S WR +W
Sbjct: 923 SFWREIW 929


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 2   SKWRNMW 8
           S WR +W
Sbjct: 923 SFWREIW 929


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired

Query: 2   SKWRNMW 8
           S WR +W
Sbjct: 924 SFWREIW 930


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 5    RNMWS 9
            +NMWS
Sbjct: 2053 KNMWS 2057




33|SequenceR|170|161|GEHLVASKWR

>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 3    HLVASKWR 10
            HLV +KW+
Sbjct: 1313 HLVLAKWK 1320


>sp|US14_HCMVA|UNCHARACTERIZED protein HVLF4|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   EHLVASKWR 10
           EH ++S WR
Sbjct: 174 EHRLSSVWR 182


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 2    EHLVASKW 9
            E L+A KW
Sbjct: 1524 EDLIADKW 1531


>sp|US14_HCMVM|MEMBRANE protein US14|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   EHLVASKWR 10
           EH ++S WR
Sbjct: 174 EHRLSSVWR 182


>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4

Query: 3    HLVASKW 9
            HLV S W
Sbjct: 1508 HLVRSAW 1514


>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 3    HLVASKW 9
            HLV S W
Sbjct: 1509 HLVRSAW 1515


>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 3    HLVASKW 9
            HLV S W
Sbjct: 1509 HLVRSAW 1515


>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind

Query: 1   GEHLVAS 7
           G HL+AS
Sbjct: 192 GRHLIAS 198


>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 1   GEHLVASKWR 10
           G+H + + WR
Sbjct: 352 GDHPMCNLWR 361


>sp|VE6_HPV25|PROTEIN E6|Human papillomavirus 25

Query: 3   HLVASKWR 10
           HLV   W+
Sbjct: 141 HLVRGSWK 148


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 1   GEHLVASKWR 10
           G+H + + WR
Sbjct: 351 GDHPMCNLWR 360


>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 3    HLVASKW 9
            HL+ S W
Sbjct: 1494 HLIRSAW 1500


>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 3    HLVASKW 9
            HL+ S W
Sbjct: 1494 HLIRSAW 1500


>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 3    HLVASKW 9
            HL+ S W
Sbjct: 1494 HLIRSAW 1500


>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 3    HLVASKW 9
            HL+ S W
Sbjct: 1494 HLIRSAW 1500


>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 3    HLVASKW 9
            HL+ S W
Sbjct: 1494 HLIRSAW 1500




34|SequenceR|175|166|RINGEGEHLV

>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   INGEGEHLV 10
           + G GEHLV
Sbjct: 105 VEGHGEHLV 113


>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   INGEGEHLV 10
           + G GEHLV
Sbjct: 105 VEGHGEHLV 113


>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)

Query: 2   INGEGEHLV 10
           IN E EHL+
Sbjct: 468 INSEDEHLL 476


>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)

Query: 2   INGEGEHLV 10
           IN E EHL+
Sbjct: 468 INSEDEHLL 476


>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)

Query: 2   INGEGEHLV 10
           IN E EHL+
Sbjct: 461 INSEDEHLL 469


>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)

Query: 2   INGEGEHLV 10
           IN E EHL+
Sbjct: 468 INSEDEHLL 476


>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)

Query: 2   INGEGEHLV 10
           IN E EHL+
Sbjct: 470 INSEDEHLL 478


>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)

Query: 2   INGEGEHLV 10
           IN E EHL+
Sbjct: 463 INSEDEHLL 471


>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)

Query: 2   INGEGEHLV 10
           IN E EHL+
Sbjct: 463 INSEDEHLL 471


>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)

Query: 2   INGEGEHLV 10
           IN E EHL+
Sbjct: 459 INSEDEHLL 467


>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)

Query: 2   INGEGEHLV 10
           IN E EHL+
Sbjct: 469 INSEDEHLL 477


>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)

Query: 2   INGEGEHLV 10
           IN E EHL+
Sbjct: 460 INSEDEHLL 468


>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong

Query: 2   INGEGEHLV 10
           IN E EHL+
Sbjct: 460 INSEDEHLL 468


>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)

Query: 2   INGEGEHLV 10
           IN E EHL+
Sbjct: 470 INSEDEHLL 478


>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5

Query: 1   RINGEGEHL 9
           R+ G G HL
Sbjct: 179 RMGGRGRHL 187


>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2

Query: 1   RINGEGEHL 9
           R+ G G HL
Sbjct: 179 RMGGRGRHL 187


>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12

Query: 1   RINGEGEHL 9
           R+ GE E+L
Sbjct: 475 RLTGESEYL 483


>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2  INGEGEHL 9
          + GEGE L
Sbjct: 81 VKGEGERL 88


>sp|NCAP_DUGBV|NUCLEOPROTEIN virus

Query: 2   INGEGEH 8
           +NG+GE+
Sbjct: 180 LNGDGEN 186


>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)

Query: 2   INGEGEH 8
           +NG+GE+
Sbjct: 181 LNGDGEN 187


>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 3   NGEGEHLV 10
           +G GEH V
Sbjct: 292 SGSGEHSV 299


>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 4    GEGEHLV 10
            G+G H+V
Sbjct: 1118 GQGTHIV 1124




35|SequenceR|180|171|RWKVSRINGE

>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P

Query: 1   RWKVSR 6
           RWK+SR
Sbjct: 439 RWKISR 444


>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   WKVSRINGE 10
           WK SR+ GE
Sbjct: 658 WKPSRVPGE 666


>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   WKVSRINGE 10
           WK SR+ GE
Sbjct: 657 WKPSRLPGE 665


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1    RWKVSRING 9
            +WK  ++NG
Sbjct: 1655 KWKYPQVNG 1663


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    RWKVSRING 9
            +WK  ++NG
Sbjct: 1655 KWKYPQVNG 1663


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 2    WKVSRING 9
            W V++ING
Sbjct: 1161 WLVNKING 1168


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 2    WKVSRING 9
            W V++ING
Sbjct: 1161 WLVNKING 1168


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 2    WKVSRING 9
            W V++ING
Sbjct: 1161 WLVNKING 1168


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 2    WKVSRING 9
            W V++ING
Sbjct: 1161 WLVNKING 1168


>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)

Query: 2   WKVSRIN 8
           W++SR N
Sbjct: 721 WEISRTN 727


>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   WKVSRIN 8
           W++SR N
Sbjct: 721 WEISRTN 727


>sp|SH_HMPVC|SMALL hydrophobic protein|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 2   WKVSR 6
           WK+SR
Sbjct: 112 WKISR 116


>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P

Query: 2    WKVSRIN 8
            W V +IN
Sbjct: 1287 WSVKKIN 1293


>sp|CAP8_ADE12|PRE-HEXON-LINKING protein VIII|Human adenovirus A serotype 12

Query: 4  VSRING 9
          +SR+NG
Sbjct: 41 ISRVNG 46


>sp|CAP8_ADE05|PRE-HEXON-LINKING protein VIII|Human adenovirus C serotype 5

Query: 4  VSRING 9
          +SR+NG
Sbjct: 41 ISRVNG 46


>sp|CAP8_ADE02|PRE-HEXON-LINKING protein VIII|Human adenovirus C serotype 2

Query: 4  VSRING 9
          +SR+NG
Sbjct: 41 ISRVNG 46


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 2    WKVSRING 9
            W V++I+G
Sbjct: 1161 WLVNKISG 1168




36|SequenceR|185|176|AILHGRWKVS

>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 2   ILHGRWKVS 10
           ++ GRW +S
Sbjct: 242 VVEGRWNIS 250


>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4    HGRWK 8
            HGRW+
Sbjct: 1104 HGRWR 1108


>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4    HGRWK 8
            HGRW+
Sbjct: 1108 HGRWR 1112


>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4    HGRWK 8
            HGRW+
Sbjct: 1107 HGRWR 1111


>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 1    AILHGRW 7
            ++LHG W
Sbjct: 2122 SLLHGLW 2128


>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A

Query: 2   ILHGRW 7
           I++GRW
Sbjct: 392 IINGRW 397


>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus

Query: 2   ILHGRW 7
           I++GRW
Sbjct: 392 IINGRW 397


>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   LHGRW 7
           L+GRW
Sbjct: 722 LYGRW 726


>sp|VC21_VACCC|PROTEIN C21/B27|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2  ILHGRWKVS 10
          I+H R KVS
Sbjct: 37 IIHHRLKVS 45


>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)

Query: 2   ILHGRWKVS 10
           I+H R KVS
Sbjct: 393 IIHHRLKVS 401


>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)

Query: 2   ILHGRWKVS 10
           I+H R KVS
Sbjct: 396 IIHHRLKVS 404


>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P

Query: 6   RWKVS 10
           RWK+S
Sbjct: 439 RWKIS 443


>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)

Query: 3   LHGRW 7
           LHG W
Sbjct: 203 LHGSW 207


>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   ILHGRWKV 9
           + HG W V
Sbjct: 287 VTHGNWTV 294


>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   ILHGRWKV 9
           + HG W V
Sbjct: 287 VTHGNWTV 294


>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4   HGRWKV 9
           H RW+V
Sbjct: 161 HRRWQV 166


>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4   HGRWKV 9
           H RW+V
Sbjct: 161 HRRWQV 166


>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   LHGRWKV 9
           LH +W V
Sbjct: 508 LHSKWGV 514


>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   LHGRWKV 9
           LH +W V
Sbjct: 508 LHSKWGV 514


>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain

Query: 2   ILHGRW 7
           ++HG W
Sbjct: 236 LIHGSW 241


>sp|VE6_HPV60|PROTEIN E6|Human papillomavirus type 60

Query: 2   ILHGRWK 8
           ++ GRW+
Sbjct: 127 LVRGRWR 133


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 4    HGRWKV 9
            HG WK+
Sbjct: 1025 HGGWKL 1030


>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)

Query: 1    AILHGRWKV 9
             +L+G W V
Sbjct: 1109 GVLNGNWMV 1117




37|SequenceR|190|181|MNNAWAILHG

>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3

Query: 1   MNNAWAIL 8
           +NN W IL
Sbjct: 524 INNQWTIL 531


>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 1   MNNAWAIL 8
           +NN W IL
Sbjct: 524 INNQWTIL 531


>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)

Query: 5   WAILHG 10
           WA +HG
Sbjct: 443 WAAIHG 448


>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 3    NAWAILH 9
            N W +LH
Sbjct: 995  NKWVLLH 1001


>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40

Query: 1  MNNAWAILH 9
          ++NA A+LH
Sbjct: 64 LSNAQALLH 72


>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7

Query: 1  MNNAWAILHG 10
          ++NA A+LH 
Sbjct: 63 LSNAQALLHA 72


>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   NAWAILH 9
           N W +LH
Sbjct: 904 NRWVLLH 910


>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)

Query: 5    WAILHG 10
            WA +HG
Sbjct: 2560 WAWIHG 2565


>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)

Query: 5    WAILHG 10
            WA +HG
Sbjct: 2573 WAWIHG 2578


>sp|E4RF5_ADE02|EARLY 4 ORF6/7 control protein|Human adenovirus C serotype 2

Query: 1  MNNAW 5
          M+NAW
Sbjct: 56 MHNAW 60


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 5    WAILHG 10
            W + HG
Sbjct: 1083 WTVFHG 1088


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 5    WAILHG 10
            W + HG
Sbjct: 1080 WTVFHG 1085


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5    WAILHG 10
            W + HG
Sbjct: 1079 WTVFHG 1084


>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)

Query: 1  MNNAWAILH 9
          M+N+++ LH
Sbjct: 24 MSNSFSFLH 32


>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain

Query: 1  MNNAWAILH 9
          M+N+++ LH
Sbjct: 24 MSNSFSFLH 32


>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)

Query: 1  MNNAWAILH 9
          M+N+++ LH
Sbjct: 24 MSNSFSFLH 32


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5    WAILHG 10
            W + HG
Sbjct: 1079 WTVFHG 1084


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 5    WAILHG 10
            W + HG
Sbjct: 1083 WTVFHG 1088


>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P

Query: 2    NNAWAILHG 10
            NN WA   G
Sbjct: 1235 NNPWASQRG 1243


>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1)

Query: 3  NAWAIL 8
          N WAIL
Sbjct: 77 NFWAIL 82


>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)

Query: 3  NAWAIL 8
          N WAIL
Sbjct: 77 NFWAIL 82


>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)

Query: 3  NAWAIL 8
          N WAIL
Sbjct: 77 NFWAIL 82


>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 3   NAWAILHG 10
           + W  LHG
Sbjct: 103 DTWRCLHG 110


>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 3   NAWAILHG 10
           + W  LHG
Sbjct: 103 DTWRCLHG 110


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 4    AWAILHG 10
            AW I HG
Sbjct: 3155 AWLIEHG 3161


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 5    WAILHG 10
            W + HG
Sbjct: 1080 WTLFHG 1085


>sp|NEF_HV1MV|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 MNNAWA 6
         M NAW+
Sbjct: 1 MGNAWS 6




38|SequenceR|195|186|FIKVGMNNAW

>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate

Query: 1    FIKVGMN 7
            F+KVG+N
Sbjct: 1942 FVKVGLN 1948


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 2    IKVGMNN 8
            IKVGMN+
Sbjct: 1494 IKVGMNS 1500


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 4   VGMNNAW 10
           +G+NN+W
Sbjct: 502 LGVNNSW 508


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 4   VGMNNAW 10
           +G+NN+W
Sbjct: 502 LGVNNSW 508


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 4   VGMNNAW 10
           +G+NN+W
Sbjct: 502 LGVNNSW 508


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 2    IKVGMN 7
            IKVGMN
Sbjct: 1495 IKVGMN 1500


>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 2  IKVGMNNAW 10
          +K+G+N+ W
Sbjct: 22 LKLGVNDTW 30


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 4   VGMNNAW 10
           +G+NN+W
Sbjct: 502 LGVNNSW 508


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 4   VGMNNAW 10
           +G+NN+W
Sbjct: 502 LGVNNSW 508


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 4   VGMNNAW 10
           +G+NN+W
Sbjct: 502 LGVNNSW 508


>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United

Query: 2  IKVGMNNAW 10
          +K+G+N+ W
Sbjct: 22 LKLGVNDTW 30


>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate

Query: 2  IKVGMNNAW 10
          +K+G+N+ W
Sbjct: 22 LKLGVNDTW 30


>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 2  IKVGMNNAW 10
          +K+G+N+ W
Sbjct: 22 LKLGVNDTW 30


>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 2  IKVGMNNAW 10
          +K+G+N+ W
Sbjct: 22 LKLGVNDTW 30


>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 2  IKVGMNNAW 10
          +K+G+N+ W
Sbjct: 22 LKLGVNDTW 30


>sp|RP35_MONPV|DNA-DIRECTED RNA polymerase 35 kDa|Monkeypox virus (MPXV)

Query: 1  FIKVGMNN 8
          FIK G NN
Sbjct: 21 FIKQGFNN 28


>sp|NSP1_ROTHU|NON-STRUCTURAL protein 1|Rotavirus A (isolate

Query: 2  IKVGMNNAW 10
          +K+G+N+ W
Sbjct: 22 LKLGVNDTW 30


>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])

Query: 2  IKVGMNNAW 10
          +K+G+N+ W
Sbjct: 22 LKLGVNDTW 30


>sp|NSP1_ROTHJ|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])

Query: 2  IKVGMNNAW 10
          +K+G+N+ W
Sbjct: 22 LKLGVNDTW 30


>sp|RP35_VACCT|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Tian Tan)

Query: 1  FIKVGMNN 8
          FIK G NN
Sbjct: 21 FIKQGFNN 28


>sp|RP35_VACCC|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  FIKVGMNN 8
          FIK G NN
Sbjct: 21 FIKQGFNN 28


>sp|VP7_ROTHC|OUTER capsid glycoprotein VP7|Rotavirus C (isolate RVC/Human/United

Query: 3   KVGMNNAW 10
           ++G+NN W
Sbjct: 182 QIGINNLW 189


>sp|VP7_ROTHE|OUTER capsid glycoprotein VP7|Rotavirus C (isolate

Query: 3   KVGMNNAW 10
           ++G+NN W
Sbjct: 182 QIGINNLW 189


>sp|RP35_VAR67|DNA-DIRECTED RNA polymerase 35 kDa|Variola virus (isolate

Query: 1  FIKVGMNN 8
          FIK G NN
Sbjct: 21 FIKQGFNN 28


>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United

Query: 3   KVGMNNAW 10
           K G+N +W
Sbjct: 288 KAGINQSW 295


>sp|RP35_VACCA|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1  FIKVGMNN 8
          FIK G NN
Sbjct: 21 FIKQGFNN 28


>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39

Query: 1  FIKVGMN 7
          + KVGMN
Sbjct: 49 YFKVGMN 55


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 1   FIKVGMNNAW 10
           +I+ G+N+ W
Sbjct: 988 WIESGLNDTW 997


>sp|NSP1_ROTH3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])

Query: 2  IKVGMNNAW 10
          +K+G N+ W
Sbjct: 22 LKLGANDEW 30


>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United

Query: 1   FIKVGMNNAW 10
           FIK+G N  +
Sbjct: 142 FIKLGKNGTY 151


>sp|C8_VACCC|PROTEIN C8|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  FIKVGMNNAW 10
          F+K+   N W
Sbjct: 62 FVKIYFKNFW 71


>sp|NSP1_ROT41|NON-STRUCTURAL protein 1|Rotavirus A (isolate

Query: 1  FIKVGMNNAW 10
           +++G N+ W
Sbjct: 21 LLRIGANSVW 30


>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United

Query: 2  IKVGMNNAW 10
          +K+G N+ W
Sbjct: 22 LKLGANDEW 30


>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain

Query: 2  IKVGMNNAW 10
          +K+G N+ W
Sbjct: 22 LKLGANDVW 30


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 1    FIKVGMNNAW 10
            +I+ G+N  W
Sbjct: 994  WIESGLNGTW 1003


>sp|NSP1_ROTH6|NON-STRUCTURAL protein 1|Rotavirus A (strain

Query: 2  IKVGMNNAW 10
          +K+G N+ W
Sbjct: 22 LKLGANDVW 30


>sp|NSP1_ROTHD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 2  IKVGMNNAW 10
          +K+G N+ W
Sbjct: 22 LKLGANDVW 30


>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)

Query: 4   VGMNNAW 10
           VG+++AW
Sbjct: 247 VGLSSAW 253


>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5

Query: 3   KVGMNNAW 10
           K G  N W
Sbjct: 432 KTGQENGW 439




39|SequenceR|200|191|KSIIDFIKVG

>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P

Query: 1  KSIIDFIKV 9
          +S+IDF+KV
Sbjct: 36 QSLIDFLKV 44


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 2    SIIDFIK 8
            S+IDFIK
Sbjct: 2090 SLIDFIK 2096


>sp|VU25_HHV6Z|PROTEIN U25|Human herpesvirus 6B (strain Z29)

Query: 1   KSIIDFIKVG 10
           +++ DF+K+G
Sbjct: 240 RNMSDFLKIG 249


>sp|VU25_HHV6U|PROTEIN U25|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   KSIIDFIKVG 10
           +++ DF+K+G
Sbjct: 240 RNMSDFLKIG 249


>sp|VU25_HHV6H|PROTEIN U25|Human herpesvirus 6B (HHV-6 variant

Query: 1   KSIIDFIKVG 10
           +++ DF+K+G
Sbjct: 240 RNMSDFLKIG 249


>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate

Query: 5    DFIKVG 10
            DF+KVG
Sbjct: 1941 DFVKVG 1946


>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   IIDFIKVG 10
           + DF KVG
Sbjct: 518 VTDFYKVG 525


>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   IIDFIKVG 10
           + DF KVG
Sbjct: 518 VTDFYKVG 525


>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)

Query: 3   IIDFIKVG 10
           +IDF K G
Sbjct: 286 LIDFFKKG 293


>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 3   IIDFIKVG 10
           +IDF K G
Sbjct: 286 LIDFFKKG 293


>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann

Query: 3   IIDFIKVG 10
           +IDF K G
Sbjct: 286 LIDFFKKG 293




40|SequenceR|205|196|NTIRQKSIID

 ***** No hits found ******


41|SequenceR|210|201|DDRPVNTIRQ

>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)

Query: 3   RPVNTI 8
           RP+NTI
Sbjct: 140 RPINTI 145


>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   RPVNTI 8
           RP+NTI
Sbjct: 133 RPINTI 138


>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)

Query: 3   RPVNTI 8
           RP+NTI
Sbjct: 139 RPINTI 144


>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)

Query: 3   RPVNTI 8
           RP+NTI
Sbjct: 133 RPINTI 138


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1    DDRPVN 6
            DDRPV+
Sbjct: 1494 DDRPVD 1499


>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 1   DDRPVNTIRQ 10
           D R VNT+ Q
Sbjct: 616 DSRAVNTVTQ 625


>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain

Query: 3    RPVNTI 8
            RPVNT+
Sbjct: 999  RPVNTL 1004


>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3

Query: 1  DDRPV 5
          DDRPV
Sbjct: 54 DDRPV 58


>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28

Query: 1  DDRPV 5
          DDRPV
Sbjct: 57 DDRPV 61


>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate

Query: 1  DDRPVNT 7
          D+RPV T
Sbjct: 36 DNRPVKT 42




42|SequenceR|215|206|PRLSIDDRPV

>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3

Query: 5  IDDRPV 10
          IDDRPV
Sbjct: 53 IDDRPV 58


>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28

Query: 5  IDDRPV 10
          IDDRPV
Sbjct: 56 IDDRPV 61


>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44

Query: 5  IDDRPV 10
          IDDRP+
Sbjct: 49 IDDRPI 54


>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13

Query: 5  IDDRPV 10
          IDDRP+
Sbjct: 51 IDDRPI 56


>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29

Query: 5  IDDRPV 10
          IDDRP+
Sbjct: 55 IDDRPI 60


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 2    RLSIDDRP 9
            R+S+D RP
Sbjct: 1120 RVSVDQRP 1127


>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 2    RLSIDDRPV 10
            RLS+  RP+
Sbjct: 1264 RLSVSSRPM 1272


>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12

Query: 4   SIDDRPV 10
           +ID RPV
Sbjct: 134 AIDSRPV 140


>sp|CAP9_ADE05|HEXON-INTERLACING protein IX|Human adenovirus C serotype 5

Query: 4  SIDDRPV 10
          SID RPV
Sbjct: 33 SIDGRPV 39


>sp|CAP9_ADE02|HEXON-INTERLACING protein IX|Human adenovirus C serotype 2

Query: 4  SIDDRPV 10
          SID RPV
Sbjct: 33 SIDGRPV 39




43|SequenceR|220|211|CPYMDPRLSI

>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)

Query: 1   CPYMDPRL 8
           CPY +P+L
Sbjct: 485 CPYTEPQL 492


>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)

Query: 1   CPYMDPRLSI 10
           CPY  PRL +
Sbjct: 493 CPYTFPRLYV 502


>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)

Query: 1   CPYMDPRL 8
           CPY +P+L
Sbjct: 487 CPYTEPQL 494


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 2   PYMDPRLS 9
           P  DPRLS
Sbjct: 429 PAADPRLS 436


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 2   PYMDPRLS 9
           P  DPRLS
Sbjct: 430 PASDPRLS 437


>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)

Query: 1   CPYMDPRL 8
           CPY  P+L
Sbjct: 472 CPYTRPQL 479


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 2   PYMDPRLS 9
           P  DPRLS
Sbjct: 429 PASDPRLS 436


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 2   PYMDPRLS 9
           P  DPRLS
Sbjct: 430 PASDPRLS 437


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 1   CPYMDPR 7
           CP + PR
Sbjct: 170 CPNLSPR 176


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 1   CPYMDPR 7
           CP + PR
Sbjct: 170 CPNLSPR 176


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 1   CPYMDPR 7
           CP + PR
Sbjct: 170 CPNLSPR 176


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1   CPYMDPR 7
           CP + PR
Sbjct: 170 CPNLSPR 176


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 1   CPYMDPR 7
           CP + PR
Sbjct: 170 CPNLSPR 176


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 1   CPYMDPR 7
           CP + PR
Sbjct: 170 CPNLSPR 176


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1   CPYMDPR 7
           CP + PR
Sbjct: 170 CPNLSPR 176


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 1   CPYMDPR 7
           CP + PR
Sbjct: 170 CPNLSPR 176


>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)

Query: 1   CPYMDPR 7
           CP + PR
Sbjct: 170 CPNLSPR 176


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 1   CPYMDPR 7
           CP + PR
Sbjct: 170 CPNLSPR 176


>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 1   CPYMDPRL 8
           CP   PRL
Sbjct: 555 CPIEQPRL 562


>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)

Query: 1   CPYMDPRL 8
           CP   PRL
Sbjct: 555 CPIEQPRL 562


>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese

Query: 1   CPYMDPRL 8
           CPY  P+L
Sbjct: 466 CPYTVPQL 473


>sp|GJ_HHV11|ENVELOPE glycoprotein J|Human herpesvirus 1 (strain 17)

Query: 2  PYMDP 6
          PYMDP
Sbjct: 85 PYMDP 89


>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV

Query: 3   YMDPRLSI 10
           Y+D RLS+
Sbjct: 272 YLDSRLSL 279


>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1   CPYMDPRLS 9
           CPY   R+S
Sbjct: 617 CPYCCNRMS 625


>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 5   DPRLSI 10
           DPR+SI
Sbjct: 538 DPRISI 543


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate

Query: 3   YMDPRL 8
           Y+DP+L
Sbjct: 423 YLDPKL 428


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 3   YMDPRL 8
           Y+DP+L
Sbjct: 424 YLDPKL 429


>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1   CPYMDPRLSI 10
           CP   P LSI
Sbjct: 296 CPKSIPGLSI 305


>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain

Query: 1   CPYMDPRL 8
           CP  DP L
Sbjct: 556 CPPQDPCL 563




44|SequenceR|225|216|KWCLSCPYMD

>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 2    WCLSCPYM 9
            WC  C Y+
Sbjct: 2958 WCAHCVYI 2965


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2    WCLSC 6
            WCL C
Sbjct: 1985 WCLRC 1989


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2    WCLSC 6
            WCL C
Sbjct: 1985 WCLRC 1989


>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   KWCLSCP 7
           +W L CP
Sbjct: 347 EWSLMCP 353


>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 1   KWCLSCP 7
           +W L CP
Sbjct: 347 EWSLMCP 353


>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus

Query: 1   KWCLSCP 7
           +W L CP
Sbjct: 347 EWSLMCP 353


>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate

Query: 1   KWCLSCP 7
           +W L CP
Sbjct: 347 EWSLMCP 353


>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)

Query: 1   KWCLSCP 7
           +W L CP
Sbjct: 347 EWSLMCP 353


>sp|PAX_I34A1|PROTEIN PA-X|Influenza A virus (strain A/Puerto

Query: 3   CLSCP 7
           CL CP
Sbjct: 246 CLKCP 250


>sp|PAX_I06A0|PROTEIN PA-X|Influenza A virus (strain A/Russia:St.Petersburg/8/2006

Query: 3   CLSCP 7
           CL CP
Sbjct: 246 CLKCP 250


>sp|PAX_I000X|PROTEIN PA-X|Influenza A virus (strain A/X-31

Query: 3   CLSCP 7
           CL CP
Sbjct: 246 CLKCP 250


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 6    CPYM 9
            CPYM
Sbjct: 2712 CPYM 2715


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 6    CPYM 9
            CPYM
Sbjct: 2712 CPYM 2715


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 6    CPYM 9
            CPYM
Sbjct: 2712 CPYM 2715


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 6    CPYM 9
            CPYM
Sbjct: 2714 CPYM 2717


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 6    CPYM 9
            CPYM
Sbjct: 2712 CPYM 2715


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 6    CPYM 9
            CPYM
Sbjct: 2714 CPYM 2717


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 6    CPYM 9
            CPYM
Sbjct: 2713 CPYM 2716


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 6    CPYM 9
            CPYM
Sbjct: 2710 CPYM 2713


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 6    CPYM 9
            CPYM
Sbjct: 2713 CPYM 2716


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 6    CPYM 9
            CPYM
Sbjct: 2693 CPYM 2696


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 6    CPYM 9
            CPYM
Sbjct: 2705 CPYM 2708


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 3   CLSCP 7
           CL+CP
Sbjct: 184 CLTCP 188


>sp|CRMB_CWPXG|SOLUBLE TNF receptor II|Cowpox virus (strain GRI-90 /

Query: 3  CLSCP 7
          CLSCP
Sbjct: 44 CLSCP 48


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 2    WCLSCPYMD 10
            W L  P+M+
Sbjct: 3329 WILDNPFME 3337


>sp|CRMB_VARV|CYTOKINE response-modifying protein B|Variola virus

Query: 3  CLSCP 7
          CLSCP
Sbjct: 44 CLSCP 48


>sp|CRMB_VAR67|CYTOKINE response-modifying protein B|Variola virus (isolate

Query: 3  CLSCP 7
          CLSCP
Sbjct: 44 CLSCP 48


>sp|CRMB_MONPV|SOLUBLE TNF receptor II|Monkeypox virus (MPXV)

Query: 3  CLSCP 7
          CLSCP
Sbjct: 44 CLSCP 48


>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 543 CLAFSYMD 550


>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 543 CLAFSYMD 550


>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 544 CLAFSYMD 551


>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 543 CLAFSYMD 550


>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 544 CLAFSYMD 551


>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 544 CLAFSYMD 551


>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 543 CLAFSYMD 550


>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 533 CLAFSYMD 540


>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 544 CLAFSYMD 551


>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 544 CLAFSYMD 551


>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 544 CLAFSYMD 551


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    WCLSCPYMD 10
            W L  P+M+
Sbjct: 3308 WILENPWME 3316


>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 544 CLAFSYMD 551


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    WCLSCPYMD 10
            W L  P+M+
Sbjct: 3305 WILENPWME 3313


>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 544 CLAFSYMD 551


>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 544 CLAFSYMD 551


>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 544 CLAFSYMD 551


>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 533 CLAFSYMD 540


>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 533 CLAFSYMD 540


>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 533 CLAFSYMD 540


>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 539 CLAFSYMD 546


>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 544 CLAFSYMD 551


>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 533 CLAFSYMD 540


>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 546 CLAFSYMD 553


>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40

Query: 3    CLSCP 7
            CL CP
Sbjct: 1075 CLRCP 1079


>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)

Query: 4   LSCPY 8
           L+CPY
Sbjct: 491 LTCPY 495


>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 544 CLAFSYMD 551


>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 544 CLAFSYMD 551


>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 544 CLAFSYMD 551


>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 544 CLAFSYMD 551


>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 546 CLAFSYMD 553


>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 546 CLAFSYMD 553


>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 544 CLAFSYMD 551


>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 546 CLAFSYMD 553


>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 544 CLAFSYMD 551


>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 539 CLAFSYMD 546


>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 544 CLAFSYMD 551


>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 546 CLAFSYMD 553


>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 539 CLAFSYMD 546


>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 543 CLAFSYMD 550


>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 544 CLAFSYMD 551


>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 544 CLAFSYMD 551


>sp|MB43_VZVO|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 2   WCLSCP 7
           W + CP
Sbjct: 116 WAVGCP 121


>sp|MB43_VZVD|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   WCLSCP 7
           W + CP
Sbjct: 116 WAVGCP 121


>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 533 CLAFSYMD 540


>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 544 CLAFSYMD 551


>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 543 CLAFSYMD 550


>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 544 CLAFSYMD 551


>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 546 CLAFSYMD 553


>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 544 CLAFSYMD 551


>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 533 CLAFSYMD 540


>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 544 CLAFSYMD 551


>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C

Query: 3   CLSCPYMD 10
           CL+  YMD
Sbjct: 544 CLAFSYMD 551


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 1   KW-CLSCPYM 9
           +W C++CP +
Sbjct: 927 RWACVACPLL 936


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 1   KW-CLSCPYM 9
           +W C++CP +
Sbjct: 927 RWTCVACPLL 936


>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967

Query: 5   SCPY 8
           SCPY
Sbjct: 152 SCPY 155


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 1   KW-CLSCPYM 9
           +W C++CP +
Sbjct: 927 RWACVACPLL 936


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 1   KW-CLSCPYM 9
           +W C++CP +
Sbjct: 927 RWACVACPLL 936


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 1   KW-CLSCPYM 9
           +W C++CP +
Sbjct: 927 RWACVACPLL 936


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 1   KW-CLSCPYM 9
           +W C++CP +
Sbjct: 927 RWACVACPLL 936


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 2    WCLSCPYMD 10
            W L  P+M+
Sbjct: 3330 WILDNPHME 3338


>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12

Query: 3   CLSCPY 8
           CL CP+
Sbjct: 948 CLQCPH 953


>sp|UL91_HHV7J|PROTEIN U62|Human herpesvirus 7 (strain JI)

Query: 1  KWCLSCPYM 9
          K CL+C ++
Sbjct: 26 KICLNCDFI 34


>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain

Query: 2  WCLSC 6
          WCL C
Sbjct: 41 WCLDC 45


>sp|NSP1_ROTH6|NON-STRUCTURAL protein 1|Rotavirus A (strain

Query: 2  WCLSC 6
          WCL C
Sbjct: 41 WCLDC 45




45|SequenceR|230|221|LTVNDKWCLS

>sp|VE2_HPV09|REGULATORY protein E2|Human papillomavirus 9

Query: 2   TVNDKW 7
           TVND W
Sbjct: 141 TVNDTW 146


>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain

Query: 4   NDKWCL 9
           NDKW L
Sbjct: 184 NDKWLL 189


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 1   LTVNDKWCLS 10
           LT NDK+ ++
Sbjct: 509 LTANDKYSMA 518


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 1   LTVNDKWC 8
           L VN+ WC
Sbjct: 502 LGVNNSWC 509


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 1   LTVNDKWC 8
           L VN+ WC
Sbjct: 502 LGVNNSWC 509


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1   LTVNDKWC 8
           L VN+ WC
Sbjct: 502 LGVNNSWC 509


>sp|MCES_MONPV|MRNA-CAPPING enzyme regulatory subunit OPG124|Monkeypox virus (MPXV)

Query: 3   VNDKWCL 9
           VN+K+C+
Sbjct: 148 VNEKYCI 154


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1   LTVNDKWC 8
           L VN+ WC
Sbjct: 502 LGVNNSWC 509


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1   LTVNDKWC 8
           L VN+ WC
Sbjct: 502 LGVNNSWC 509


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 1   LTVNDKWC 8
           L VN+ WC
Sbjct: 502 LGVNNSWC 509


>sp|MCES_VARV|MRNA-CAPPING enzyme regulatory subunit|Variola virus

Query: 3   VNDKWCL 9
           VN+K+C+
Sbjct: 148 VNEKYCI 154


>sp|MCES_VAR67|MRNA-CAPPING enzyme regulatory subunit OPG124|Variola virus (isolate

Query: 3   VNDKWCL 9
           VN+K+C+
Sbjct: 148 VNEKYCI 154


>sp|MCES_VACCA|MRNA-CAPPING enzyme regulatory subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 3   VNDKWCL 9
           VN+K+C+
Sbjct: 148 VNEKYCI 154


>sp|MCES_VACCC|MRNA-CAPPING enzyme regulatory subunit OPG124|Vaccinia virus (strain Copenhagen)

Query: 3   VNDKWCL 9
           VN+K+C+
Sbjct: 148 VNEKYCI 154


>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 1   LTVNDKW 7
           LT N+KW
Sbjct: 410 LTTNEKW 416


>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|US05_HCMVO|UNCHARACTERIZED protein US5|Human cytomegalovirus (strain Toledo) (HHV-5)

Query: 1   LTVNDKW 7
           ++VN++W
Sbjct: 119 ISVNNRW 125


>sp|US05_HCMVA|UNCHARACTERIZED protein US5|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   LTVNDKW 7
           ++VN++W
Sbjct: 118 ISVNNRW 124


>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 672 INDPWVL 678


>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain

Query: 5  DKWCL 9
          D WCL
Sbjct: 60 DMWCL 64


>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|ORF49_HHV8P|PROTEIN ORF49|Human herpesvirus 8 type P

Query: 6   KWCLS 10
           +WCLS
Sbjct: 146 EWCLS 150


>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 688 INDPWVL 694


>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 691 INDPWVL 697


>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 688 INDPWVL 694


>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980

Query: 3   VNDKWCL 9
           +ND W L
Sbjct: 695 INDPWVL 701


>sp|PHOSP_VSIVS|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 3   VNDKWCLS 10
           V+D W LS
Sbjct: 194 VSDVWALS 201


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 1    LTVNDK 6
            LT+NDK
Sbjct: 1324 LTINDK 1329


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 1    LTVNDK 6
            LT+NDK
Sbjct: 1324 LTINDK 1329


>sp|C8_VACCC|PROTEIN C8|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  LTVNDKWC 8
          +TV  KWC
Sbjct: 72 ITVMTKWC 79


>sp|PHOSP_VSIVN|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 3   VNDKWCLS 10
           V+D W LS
Sbjct: 194 VSDVWSLS 201


>sp|PHOSP_VSIVM|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 3   VNDKWCLS 10
           V+D W LS
Sbjct: 194 VSDVWSLS 201


>sp|PHOSP_VSIVG|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 3   VNDKWCLS 10
           V+D W LS
Sbjct: 194 VSDVWSLS 201


>sp|PHOSP_VSIVA|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 3   VNDKWCLS 10
           V+D W LS
Sbjct: 194 VSDVWSLS 201


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 1    LTVNDKWCLS 10
            +TVN   C+S
Sbjct: 1762 ITVNSDRCIS 1771


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 3    VNDKW 7
            V+DKW
Sbjct: 1526 VSDKW 1530


>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 3    VNDKW 7
            V+DKW
Sbjct: 1529 VSDKW 1533


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 3    VNDKW 7
            V+DKW
Sbjct: 1529 VSDKW 1533




46|SequenceR|235|226|GWGIILTVND

>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin

Query: 2   WGIILT 7
           WGI+LT
Sbjct: 637 WGILLT 642


>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)

Query: 2   WGIILT 7
           WG++LT
Sbjct: 637 WGVLLT 642


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 1   GWGIILTVN 9
           GW + +TVN
Sbjct: 423 GWRVQVTVN 431


>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 2  WGIILTV 8
          WG++LT+
Sbjct: 4  WGLLLTM 10


>sp|VME1_CVH22|MEMBRANE protein|Human coronavirus 229E (HCoV-229E)

Query: 1  GWGIILTV 8
          GW +ILT+
Sbjct: 20 GWNVILTI 27


>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)

Query: 1    GWGIILTVND 10
            G+G+I+T  D
Sbjct: 2082 GYGLIMTPAD 2091


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 1    GWGIILTVND 10
            G+G+I+T  D
Sbjct: 2081 GYGLIMTPAD 2090


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 1    GWGIILTVND 10
            G+G+I+T  D
Sbjct: 2083 GYGLIMTPAD 2092


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 1    GWGIILTVND 10
            G+G+I+T  D
Sbjct: 2072 GYGLIMTPAD 2081


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 1    GWGIILTVND 10
            G+G+I+T  D
Sbjct: 2071 GYGLIMTPAD 2080


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 1    GWGIILTVND 10
            G+G+I+T  D
Sbjct: 2073 GYGLIMTPAD 2082


>sp|PG187_VAR67|B1 kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1  GWGIILTVND 10
          G+G I T ND
Sbjct: 26 GFGSIYTTND 35


>sp|PG187_MONPV|B1 kinase|Monkeypox virus (MPXV)

Query: 1  GWGIILTVND 10
          G+G I T ND
Sbjct: 26 GFGSIYTTND 35


>sp|PG187_VACCA|B1 kinase|Vaccinia virus (strain Ankara) (VACV)

Query: 1  GWGIILTVND 10
          G+G I T ND
Sbjct: 26 GFGSIYTTND 35


>sp|PG187_VACCC|B1 kinase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  GWGIILTVND 10
          G+G I T ND
Sbjct: 26 GFGSIYTTND 35


>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   GIILTVN 9
           G+I TVN
Sbjct: 383 GLIFTVN 389


>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   GIILTVN 9
           G+I TVN
Sbjct: 383 GLIFTVN 389


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 3    GIILTVND 10
            G++ T+ND
Sbjct: 3755 GVVWTLND 3762


>sp|UL66_HCMVA|UNCHARACTERIZED protein UL66|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2  WGIILTVN 9
          W ++LTV+
Sbjct: 57 WFVVLTVS 64


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 3    GIILTVND 10
            G++ T+ND
Sbjct: 3755 GVVWTLND 3762




47|SequenceR|240|231|VKVSTGWGII

>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D

Query: 5   TGWGII 10
           TGWG++
Sbjct: 693 TGWGLV 698


>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D

Query: 5   TGWGII 10
           TGWG++
Sbjct: 693 TGWGLV 698


>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D

Query: 5   TGWGII 10
           TGWG++
Sbjct: 693 TGWGLV 698


>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D

Query: 5   TGWGII 10
           TGWG++
Sbjct: 693 TGWGLV 698


>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D

Query: 5   TGWGII 10
           TGWG++
Sbjct: 693 TGWGLV 698


>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C

Query: 5   TGWGII 10
           TGWG++
Sbjct: 704 TGWGLV 709


>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)

Query: 2   KVSTGWGI 9
           K  TGWG+
Sbjct: 633 KEETGWGL 640


>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 2   KVSTGWGI 9
           K  TGWG+
Sbjct: 633 KEGTGWGL 640


>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)

Query: 2   KVSTGWGI 9
           K  TGWG+
Sbjct: 633 KEGTGWGL 640


>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)

Query: 2   KVSTGWGI 9
           K  TGWG+
Sbjct: 633 KEGTGWGL 640


>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)

Query: 2   KVSTGWGI 9
           K  TGWG+
Sbjct: 633 KEGTGWGL 640


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1   VKVSTGW 7
           + +STGW
Sbjct: 379 IDISTGW 385


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1   VKVSTGW 7
           + +STGW
Sbjct: 379 IDISTGW 385


>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)

Query: 3   VSTGW 7
           +STGW
Sbjct: 142 ISTGW 146


>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain

Query: 2   KVSTGW 7
           KVS GW
Sbjct: 588 KVSLGW 593


>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)

Query: 6   GWGII 10
           GWG++
Sbjct: 735 GWGVV 739


>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 6   GWGII 10
           GWG++
Sbjct: 735 GWGVV 739


>sp|E434_ADE12|EARLY E4 34 kDa protein|Human adenovirus A serotype 12

Query: 2   KVSTGW 7
           KVS GW
Sbjct: 193 KVSFGW 198


>sp|NP_ADE40|PRE-HISTONE-LIKE nucleoprotein|Human adenovirus F serotype 40

Query: 4  STGWGI 9
          +TGWG+
Sbjct: 10 NTGWGL 15


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 3    VSTGWGII 10
            V T WGI+
Sbjct: 3452 VCTYWGIL 3459


>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 5   TGWG 8
           TGWG
Sbjct: 771 TGWG 774


>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)

Query: 5   TGWG 8
           TGWG
Sbjct: 771 TGWG 774


>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)

Query: 5   TGWG 8
           TGWG
Sbjct: 771 TGWG 774


>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)

Query: 5   TGWG 8
           TGWG
Sbjct: 766 TGWG 769


>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)

Query: 5   TGWG 8
           TGWG
Sbjct: 764 TGWG 767


>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)

Query: 5   TGWG 8
           TGWG
Sbjct: 771 TGWG 774


>sp|NP_ADE04|PRE-HISTONE-LIKE nucleoprotein|Human adenovirus E serotype 4

Query: 4  STGWGI 9
          +TGWG+
Sbjct: 10 NTGWGL 15


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 3    VSTGWGII 10
            V T WGI+
Sbjct: 3452 VCTYWGIL 3459


>sp|NP_ADE05|PRE-HISTONE-LIKE nucleoprotein|Human adenovirus C serotype 5

Query: 4  STGWGI 9
          +TGWG+
Sbjct: 10 NTGWGL 15


>sp|NP_ADE02|PRE-HISTONE-LIKE nucleoprotein|Human adenovirus C serotype 2

Query: 4  STGWGI 9
          +TGWG+
Sbjct: 10 NTGWGL 15




48|SequenceR|245|236|EKVSCVKVST

>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain

Query: 1   EKVSCVKVS 9
           EK  C+K+S
Sbjct: 218 EKRKCIKIS 226




49|SequenceR|250|241|ESAHREKVSC

>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 1    ESAHREKVSC 10
            +SA +EK+ C
Sbjct: 1160 DSATQEKIKC 1169


>sp|GD_HHV2H|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain HG52)

Query: 4   HREKVSC 10
           HR + SC
Sbjct: 208 HRARASC 214


>sp|GD_HHV23|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain 333)

Query: 4   HREKVSC 10
           HR + SC
Sbjct: 208 HRARASC 214


>sp|UL11P_HCMVM|PROTEIN UL11|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4  HREKV 8
          HREKV
Sbjct: 9  HREKV 13


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 1    ESAHREKVSC 10
            ++A +EK+ C
Sbjct: 1160 DNATQEKIKC 1169


>sp|UL11P_HCMVA|PROTEIN UL11|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4  HREKV 8
          HREKV
Sbjct: 9  HREKV 13


>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002

Query: 2   SAHREKVSC 10
           S HR  +SC
Sbjct: 138 SPHRTLMSC 146


>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong

Query: 2   SAHREKVSC 10
           S HR  +SC
Sbjct: 153 SPHRTLMSC 161


>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky

Query: 2   SAHREKVSC 10
           S HR  +SC
Sbjct: 133 SPHRTLMSC 141


>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996

Query: 2   SAHREKVSC 10
           S HR  +SC
Sbjct: 153 SPHRTLMSC 161


>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky

Query: 2   SAHREKVSC 10
           S HR  +SC
Sbjct: 133 SPHRTLMSC 141


>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 2   SAHREKVSC 10
           S HR  +SC
Sbjct: 133 SPHRTLMSC 141


>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 2   SAHREKVSC 10
           S HR  +SC
Sbjct: 133 SPHRTLMSC 141


>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003

Query: 2   SAHREKVSC 10
           S HR  +SC
Sbjct: 133 SPHRTLMSC 141


>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 2   SAHREKVSC 10
           S HR  +SC
Sbjct: 133 SPHRTLMSC 141




50|SequenceR|255|246|PLDRMESAHR

>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 2    LDRMESAHR 10
            L++ME  HR
Sbjct: 3076 LEKMEPMHR 3084


>sp|RP35_VAR67|DNA-DIRECTED RNA polymerase 35 kDa|Variola virus (isolate Human/India/Ind3/1967)

Query: 4   RMESAHR 10
           R+ES HR
Sbjct: 270 RLESYHR 276


>sp|RP35_VACCT|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Tian Tan)

Query: 4   RMESAHR 10
           R+ES HR
Sbjct: 270 RLESYHR 276


>sp|RP35_VACCC|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4   RMESAHR 10
           R+ES HR
Sbjct: 270 RLESYHR 276


>sp|RP35_VACCA|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 4   RMESAHR 10
           R+ES HR
Sbjct: 270 RLESYHR 276


>sp|RP35_MONPV|DNA-DIRECTED RNA polymerase 35 kDa|Monkeypox virus (MPXV)

Query: 4   RMESAHR 10
           R+ES HR
Sbjct: 270 RLESYHR 276


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 4    RMESAHR 10
            RME  HR
Sbjct: 3082 RMEERHR 3088


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 2    LDRMESAHR 10
            L R+E  HR
Sbjct: 2761 LQRLEKDHR 2769


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 1    PLDRMESAHR 10
            P D + S HR
Sbjct: 1749 PTDDVSSPHR 1758


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 1    PLDRMESAHR 10
            P D + S HR
Sbjct: 1749 PTDDVSSPHR 1758


>sp|PHOSP_PI3H4|PHOSPHOPROTEIN parainfluenza 3 virus (strain

Query: 2   LDRMESAHR 10
           L RM+ +HR
Sbjct: 438 LKRMDESHR 446




51|SequenceR|260|251|EVYRSPLDRM

>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   EVYRSPLD 8
           ++YR PLD
Sbjct: 626 QLYRGPLD 633


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   EVYRSPLD 8
           ++YR PLD
Sbjct: 620 QLYRGPLD 627


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   EVYRSPLD 8
           ++YR PLD
Sbjct: 626 QLYRGPLD 633


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   EVYRSPLD 8
           ++YR PLD
Sbjct: 626 QLYRGPLD 633


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   EVYRSPLD 8
           ++YR PLD
Sbjct: 627 QLYRGPLD 634


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   EVYRSPLD 8
           ++YR PLD
Sbjct: 626 QLYRGPLD 633


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   EVYRSPLD 8
           ++YR PLD
Sbjct: 626 QLYRGPLD 633


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   EVYRSPLD 8
           ++YR PLD
Sbjct: 626 QLYRGPLD 633


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   EVYRSPLD 8
           ++YR PLD
Sbjct: 626 QLYRGPLD 633


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   EVYRSPLD 8
           ++YR PLD
Sbjct: 626 QLYRGPLD 633


>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   EVYRSPLD 8
           ++YR PLD
Sbjct: 626 QLYRGPLD 633


>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   EVYRSPLD 8
           ++YR PLD
Sbjct: 605 QLYRGPLD 612


>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 1   EVYRSPLDR 9
           E YR PL+R
Sbjct: 147 EKYRDPLNR 155


>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   EVYRSPLD 8
           ++YR PLD
Sbjct: 130 QLYRGPLD 137


>sp|US30_HCMVM|UNCHARACTERIZED protein US30|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4  RSPLDR 9
          RSPLDR
Sbjct: 5  RSPLDR 10


>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)

Query: 1   EVYRSPLD 8
           E+Y+ PLD
Sbjct: 482 EIYKVPLD 489


>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)

Query: 1   EVYRSPLD 8
           E+Y+ PLD
Sbjct: 482 EIYKVPLD 489


>sp|US30_HCMVA|UNCHARACTERIZED protein HHRF5|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4  RSPLDR 9
          RSPLDR
Sbjct: 5  RSPLDR 10


>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain

Query: 1  EVYRSPL 7
          EVYR+P 
Sbjct: 32 EVYRTPF 38


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2    VYRSPLDR 9
            VYR  LDR
Sbjct: 1532 VYRKVLDR 1539


>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)

Query: 2   VYRSPLDRM 10
           +YR+PL R+
Sbjct: 183 IYRAPLWRV 191


>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare

Query: 2   VYRSPLD 8
           VYR P D
Sbjct: 780 VYRKPSD 786


>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)

Query: 1   EVYRSPLD 8
           ++Y+ PLD
Sbjct: 481 DIYKVPLD 488


>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)

Query: 1   EVYRSPLD 8
           ++Y+ PLD
Sbjct: 481 DIYKVPLD 488


>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)

Query: 1   EVYRSPLD 8
           ++Y+ PLD
Sbjct: 481 DIYKVPLD 488


>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)

Query: 1   EVYRSPLD 8
           ++Y+ PLD
Sbjct: 481 DIYKVPLD 488


>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 1   EVYRSPLDRM 10
           + YR+ L+R+
Sbjct: 572 DTYRATLERL 581


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   EVYRSPLDRM 10
           + YR+ L+R+
Sbjct: 572 DTYRATLERL 581


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 1  EVYRSPLD 8
          EVY  P+D
Sbjct: 6  EVYDDPID 13


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate

Query: 1  EVYRSPLD 8
          EVY  P+D
Sbjct: 6  EVYDDPID 13


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 1  EVYRSPLD 8
          EVY  P+D
Sbjct: 6  EVYDDPID 13


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 1  EVYRSPLD 8
          EVY  P+D
Sbjct: 6  EVYDDPID 13


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 1  EVYRSPLD 8
          EVY  P+D
Sbjct: 6  EVYDDPID 13


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 1  EVYRSPLD 8
          EVY  P+D
Sbjct: 6  EVYDDPID 13


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 1  EVYRSPLD 8
          EVY  P+D
Sbjct: 6  EVYDDPID 13


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired

Query: 1  EVYRSPLD 8
          EVY  P+D
Sbjct: 7  EVYDDPID 14


>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   VYRSPLDR 9
           +YR+PL R
Sbjct: 183 IYRAPLWR 190


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 1  EVYRSPLD 8
          EVY  P+D
Sbjct: 6  EVYDDPID 13


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 1  EVYRSPLD 8
          EVY  P+D
Sbjct: 6  EVYDDPID 13


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate

Query: 1  EVYRSPLD 8
          EVY  P+D
Sbjct: 6  EVYDDPID 13


>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   VYRSPLDR 9
           +YR+PL R
Sbjct: 114 IYRAPLWR 121


>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)

Query: 3   YRSPLDR 9
           YR P+D+
Sbjct: 407 YREPVDQ 413




52|SequenceR|265|256|FQSVIEVYRS

>sp|VP30_EBOSU|TRANSCRIPTIONAL activator VP30|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 2   QSVIEVYR 9
           +SV+EVY+
Sbjct: 205 ESVLEVYQ 212


>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A

Query: 1  FQSVIEVYRS 10
          FQS++  Y+S
Sbjct: 87 FQSLLMTYKS 96


>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus

Query: 1  FQSVIEVYRS 10
          FQS++  Y+S
Sbjct: 87 FQSLLMTYKS 96


>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B

Query: 1  FQSVIEVYRS 10
          FQS++  Y+S
Sbjct: 87 FQSLLMTYKS 96


>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank

Query: 1   FQSVIEVY 8
           F+S +EVY
Sbjct: 652 FKSALEVY 659


>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 1   FQSVIEVY 8
           F+S +EVY
Sbjct: 652 FKSALEVY 659


>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 1   FQSVIEVY 8
           F+S +EVY
Sbjct: 652 FKSALEVY 659


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 1   FQSVIEVY 8
           F+S +EVY
Sbjct: 652 FKSALEVY 659


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 1   FQSVIEVY 8
           F+S +EVY
Sbjct: 653 FKSALEVY 660


>sp|VP30_EBORR|TRANSCRIPTIONAL activator VP30|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 3   SVIEVYR 9
           SV+EVY+
Sbjct: 206 SVLEVYQ 212


>sp|VP30_EBORE|TRANSCRIPTIONAL activator VP30|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 3   SVIEVYR 9
           SV+EVY+
Sbjct: 206 SVLEVYQ 212


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 1   FQSVIEVY 8
           F+S +EVY
Sbjct: 652 FKSSLEVY 659




53|SequenceR|270|261|YFETEFQSVI

>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 2    FETEFQ 7
            FETEFQ
Sbjct: 1893 FETEFQ 1898


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 2    FETEFQ 7
            FETEFQ
Sbjct: 1893 FETEFQ 1898


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 2    FETEFQ 7
            FETEFQ
Sbjct: 1889 FETEFQ 1894


>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)

Query: 2   FETEFQSV 9
           FETEF++V
Sbjct: 117 FETEFKNV 124


>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)

Query: 2  FETEFQSV 9
            TEFQSV
Sbjct: 66 LHTEFQSV 73


>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 1    YFETEFQSVI 10
            Y  TEF+SV+
Sbjct: 2087 YDLTEFESVV 2096


>sp|VU55_HHV6U|UNCHARACTERIZED protein U55|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   YFETEFQSVI 10
           Y+E  F+S+I
Sbjct: 186 YWENLFKSII 195


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 1    YFETEFQSVI 10
            Y  TEF+SV+
Sbjct: 2084 YDLTEFESVV 2093


>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 1    YFETEFQSVI 10
            Y  TEF+SV+
Sbjct: 2084 YDLTEFESVV 2093




54|SequenceR|275|266|ALGSIYFETE

>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 1    ALGSIYFETE 10
            A+G+++F+TE
Sbjct: 1874 AVGNVWFKTE 1883


>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 1    ALGSIYFETE 10
            A+G+I+F+T+
Sbjct: 1873 AIGNIWFKTQ 1882


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 2   LGSIYFETE 10
           LGS +FET+
Sbjct: 217 LGSSHFETQ 225


>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 1    ALGSIYFETE 10
            A+G+++F TE
Sbjct: 1874 AVGNVWFRTE 1883


>sp|VP30_MABVO|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1  ALGSIYFETE 10
          A+ SIY ET+
Sbjct: 15 AIPSIYHETQ 24


>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain

Query: 1   ALGSIYFE 8
           ALG +YF+
Sbjct: 573 ALGMLYFD 580


>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain

Query: 1   ALGSIYFE 8
           ALG +YF+
Sbjct: 573 ALGMLYFD 580


>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)

Query: 2   LGSIYF 7
           +GSIYF
Sbjct: 345 IGSIYF 350


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 1    ALGSIYFET 9
            A+G+++F+T
Sbjct: 1874 AVGNVWFQT 1882


>sp|VP7_ROTHD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United

Query: 2   LGSIYFE 8
           +GS+YF+
Sbjct: 113 IGSVYFK 119


>sp|VP7_ROTHA|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 2   LGSIYFE 8
           +GS+YF+
Sbjct: 113 IGSVYFK 119


>sp|VP7_ROTHH|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 2   LGSIYFE 8
           +GS+YF+
Sbjct: 113 IGSVYFK 119


>sp|VP7_ROTHO|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 3   GSIYFE 8
           GSIYF+
Sbjct: 114 GSIYFK 119


>sp|VP7_ROTH3|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 3   GSIYFE 8
           GSIYF+
Sbjct: 114 GSIYFK 119


>sp|VP7_ROTAM|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United

Query: 3   GSIYFE 8
           GSIYF+
Sbjct: 114 GSIYFK 119


>sp|VP7_ROTYO|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 3   GSIYFE 8
           GSIYF+
Sbjct: 114 GSIYFK 119


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   ALGSIYFET 9
           ALG++ F T
Sbjct: 675 ALGAVRFNT 683


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   ALGSIYFET 9
           ALG++ F T
Sbjct: 675 ALGAVRFNT 683


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   ALGSIYFET 9
           ALG++ F T
Sbjct: 675 ALGAVRFNT 683


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   ALGSIYFET 9
           ALG++ F T
Sbjct: 675 ALGAVRFNT 683


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   ALGSIYFET 9
           ALG++ F T
Sbjct: 675 ALGAVRFNT 683


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   ALGSIYFET 9
           ALG++ F T
Sbjct: 675 ALGAVRFNT 683


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   ALGSIYFET 9
           ALG++ F T
Sbjct: 675 ALGAVRFNT 683


>sp|VP7_ROTHQ|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 3   GSIYFE 8
           GSIYF+
Sbjct: 114 GSIYFK 119


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   ALGSIYFET 9
           ALG++ F T
Sbjct: 675 ALGAVRFNT 683


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   ALGSIYFET 9
           ALG++ F T
Sbjct: 675 ALGAVRFNT 683


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   ALGSIYFET 9
           ALG++ F T
Sbjct: 669 ALGAVRFNT 677


>sp|VP30_MABVA|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1  ALGSIYFETE 10
          A  SIY ET+
Sbjct: 15 ATPSIYHETQ 24


>sp|VE2_HPV70|REGULATORY protein E2|Human papillomavirus type 70

Query: 3   GSIYFET 9
           G+IY++T
Sbjct: 140 GAIYYKT 146


>sp|VP7_ROTKU|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 3   GSIYFE 8
           GS+YF+
Sbjct: 114 GSVYFK 119


>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   ALGSIYFET 9
           ALG++ F T
Sbjct: 654 ALGAVRFNT 662


>sp|VP7_ROTHS|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 3   GSIYFE 8
           GS+YF+
Sbjct: 114 GSVYFK 119




55|SequenceR|280|271|QDCLPALGSI

>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2    DCLPALGSI 10
            +CLP+L SI
Sbjct: 1007 ECLPSLVSI 1015


>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2    DCLPALGSI 10
            +CLP+L SI
Sbjct: 1007 ECLPSLVSI 1015


>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2    DCLPALGSI 10
            +CLP+L SI
Sbjct: 1007 ECLPSLVSI 1015


>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)

Query: 3   CLPALGSI 10
           C P +GSI
Sbjct: 607 CFPMIGSI 614


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   CLPALGSI 10
           C P +GSI
Sbjct: 930 CFPMIGSI 937


>sp|UL92_HHV8P|PROTEIN ORF31|Human herpesvirus 8 type P

Query: 2   DCLPALG 8
           +CLP LG
Sbjct: 128 ECLPVLG 134


>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70

Query: 3   CLPALG 8
           C+PA+G
Sbjct: 161 CVPAMG 166


>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66

Query: 3   CLPALG 8
           C PALG
Sbjct: 160 CAPALG 165


>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39

Query: 3   CLPALG 8
           C+PA+G
Sbjct: 160 CVPAIG 165


>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180

Query: 3   CLPALG 8
           C+PA+G
Sbjct: 161 CVPAIG 166


>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68

Query: 3   CLPALG 8
           C+PA+G
Sbjct: 161 CVPAIG 166


>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45

Query: 3   CLPALG 8
           C+PA+G
Sbjct: 188 CVPAIG 193


>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain

Query: 3   CLPALGSI 10
           C P LG++
Sbjct: 582 CPPVLGTV 589


>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56

Query: 3   CLPALG 8
           C PA+G
Sbjct: 195 CTPAMG 200


>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65

Query: 3   CLPALG 8
           C PA+G
Sbjct: 162 CTPAIG 167


>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4

Query: 3   CLPALG 8
           C PA+G
Sbjct: 162 CTPAIG 167


>sp|UL141_HCMVM|PROTEIN UL141|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   CLPALG 8
           C PALG
Sbjct: 174 CTPALG 179


>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30

Query: 3   CLPALG 8
           C PA+G
Sbjct: 168 CTPAIG 173


>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)

Query: 2   DCLPAL 7
           DCLP L
Sbjct: 710 DCLPVL 715


>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53

Query: 3   CLPALG 8
           C PA+G
Sbjct: 159 CAPAIG 164


>sp|E310_ADE05|EARLY E3B 10.4 kDa protein|Human adenovirus C serotype 5

Query: 2  DCLPAL 7
          DC+PA 
Sbjct: 30 DCIPAF 35




56|SequenceR|285|276|SLVVLQDCLP

>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus

Query: 1  SLVVLQDCLP 10
          +L+V+Q C P
Sbjct: 46 TLIVVQACQP 55


>sp|VPK2_VAR67|SERINE/THREONINE-PROTEIN kinase 2|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3  VVLQDCL 9
          V+L DCL
Sbjct: 23 VILGDCL 29


>sp|VPK2_VACCT|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Tian Tan)

Query: 3  VVLQDCL 9
          V+L DCL
Sbjct: 23 VILGDCL 29


>sp|VPK2_VACCC|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3  VVLQDCL 9
          V+L DCL
Sbjct: 23 VILGDCL 29


>sp|VPK2_VACCA|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Ankara) (VACV)

Query: 3  VVLQDCL 9
          V+L DCL
Sbjct: 23 VILGDCL 29


>sp|VPK2_MONPV|SERINE/THREONINE-PROTEIN kinase 2|Monkeypox virus (MPXV)

Query: 3  VVLQDCL 9
          V+L DCL
Sbjct: 23 VILGDCL 29


>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   SLVVLQDC 8
           S +V+QDC
Sbjct: 478 SPIVIQDC 485


>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1   SLVVLQDC 8
           S +V+QDC
Sbjct: 474 SPIVIQDC 481


>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   SLVVLQDC 8
           S +V+QDC
Sbjct: 480 SPIVIQDC 487


>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5

Query: 1   SLVVLQDCLP 10
           +L+V Q C P
Sbjct: 444 ALIVFQCCNP 453


>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2

Query: 1   SLVVLQDCLP 10
           +L+V Q C P
Sbjct: 444 ALIVFQCCNP 453


>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)

Query: 3   VVLQDCL 9
           V+L DCL
Sbjct: 185 VILGDCL 191


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 4    VLQDCL 9
            +L+DCL
Sbjct: 1762 ILKDCL 1767


>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)

Query: 1   SLVVLQDCL 9
           +L+VL +CL
Sbjct: 776 ALIVLCNCL 784




57|SequenceR|290|281|IEKVYSLVVL

>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 1    IEKVYSLV 8
            IEKVYS V
Sbjct: 2051 IEKVYSPV 2058


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 1    IEKVYSLV 8
            IEKVYS V
Sbjct: 2049 IEKVYSPV 2056


>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3

Query: 1   IEKVYSLVV 9
           +EKV+SL++
Sbjct: 330 LEKVFSLLL 338


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 1    IEKVYS 6
            IEKVYS
Sbjct: 2049 IEKVYS 2054


>sp|TRX1_HHV7J|TRIPLEX capsid protein 1|Human herpesvirus 7 (strain JI)

Query: 2   EKVYSLVVL 10
           E +Y LV+L
Sbjct: 155 ENIYGLVIL 163




58|SequenceR|295|286|ETKESIEKVY

>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 1   ETKESIEKV 9
           +TKE++EK+
Sbjct: 96  DTKEALEKI 104


>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   ETKESIEKV 9
           +TKE++EK+
Sbjct: 96  DTKEAVEKM 104


>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   ETKESIEKV 9
           +TKE++EK+
Sbjct: 96  DTKEALEKI 104


>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   ETKESIEKV 9
           +TKE++EK+
Sbjct: 96  DTKEALEKI 104


>sp|GAG_HV1J3|GAG polyprotein|Human immunodeficiency virus type 1

Query: 1   ETKESIEKV 9
           +TKE++EK+
Sbjct: 96  DTKEALEKI 104


>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1

Query: 1   ETKESIEKV 9
           +TKE++EK+
Sbjct: 96  DTKEALEKI 104


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   ETKESIEKV 9
           +TKE++EK+
Sbjct: 96  DTKEALEKI 104


>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   ETKESIEKV 9
           +TKE++EK+
Sbjct: 96  DTKEALEKI 104


>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 1   ETKESIEKV 9
           +TKE++EK+
Sbjct: 96  DTKEALEKI 104


>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1

Query: 1   ETKESIEKV 9
           +TKE++EK+
Sbjct: 96  DTKEALEKI 104


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 5    SIEKVY 10
            SIEKVY
Sbjct: 2048 SIEKVY 2053


>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   ETKESIEKV 9
           +TKE++EK+
Sbjct: 96  DTKEALEKI 104


>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 5    SIEKVY 10
            SIEKVY
Sbjct: 2050 SIEKVY 2055


>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 5    SIEKVY 10
            SIEKVY
Sbjct: 2048 SIEKVY 2053


>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1

Query: 1   ETKESIEKV 9
           +TKE++EK+
Sbjct: 96  DTKEAVEKM 104


>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 1   ETKESIEKV 9
           +TKE++EK+
Sbjct: 96  DTKEALEKM 104


>sp|VE6_HPV94|PROTEIN E6|Human papillomavirus type 94

Query: 1  ETKESI 6
          ETKESI
Sbjct: 90 ETKESI 95


>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1

Query: 1   ETKESIEKV 9
           +TKE++EK+
Sbjct: 96  DTKEALEKM 104




59|SequenceR|300|291|ACYERETKES

>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)

Query: 2   CYERETKES 10
           CYE+E +E+
Sbjct: 287 CYEKEPEET 295


>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African

Query: 2   CYERETKES 10
           CYE+E +E+
Sbjct: 287 CYEKEPEET 295


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 4   ERETKES 10
           ERE KES
Sbjct: 598 EREQKES 604


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 4   ERETKES 10
           ERE KES
Sbjct: 598 EREQKES 604


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 4   ERETKES 10
           ERE KES
Sbjct: 599 EREQKES 605


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 4   ERETKES 10
           ERE KES
Sbjct: 599 EREQKES 605


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 4   ERETKES 10
           ERE KES
Sbjct: 598 EREQKES 604


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 4   ERETKES 10
           ERE KES
Sbjct: 598 EREQKES 604


>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1

Query: 2   CYERETKES 10
           C E+ET+E+
Sbjct: 624 CQEQETEEN 632


>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain

Query: 3   YERETK 8
           YER+TK
Sbjct: 183 YERKTK 188


>sp|E3B14_ADE12|EARLY E3B 12.7 kDa protein|Human adenovirus A serotype 12

Query: 2  CYERET 7
          CY +ET
Sbjct: 30 CYTKET 35


>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain

Query: 3   YERETK 8
           YER+TK
Sbjct: 183 YERKTK 188


>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)

Query: 1   ACYERE 6
           +CY+RE
Sbjct: 283 SCYKRE 288


>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)

Query: 2   CYERETKES 10
           CYE+E + +
Sbjct: 287 CYEKEPEST 295




60|SequenceR|305|296|DLRPRACYER

>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 2    LRPRACYER 10
            LRPR C ER
Sbjct: 2080 LRPRWCDER 2088


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 2    LRPRACYER 10
            LRPR C ER
Sbjct: 2080 LRPRWCDER 2088


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 2    LRPRACYER 10
            LRPR C ER
Sbjct: 2080 LRPRWCDER 2088


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 2    LRPRACYER 10
            LRPR C ER
Sbjct: 2080 LRPRWCDER 2088


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 2    LRPRACYER 10
            LRPR C ER
Sbjct: 2080 LRPRWCDER 2088


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 2    LRPRACYER 10
            LRPR C ER
Sbjct: 2080 LRPRWCDER 2088


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 2    LRPRACYER 10
            LRPR C ER
Sbjct: 2080 LRPRWCDER 2088


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 2    LRPRACYER 10
            LRPR C ER
Sbjct: 2080 LRPRWCDER 2088


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 2    LRPRACYER 10
            LRPR C ER
Sbjct: 2080 LRPRWCDER 2088


>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)

Query: 3   RPRACYER 10
           RP ACY R
Sbjct: 592 RPGACYSR 599


>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)

Query: 3   RPRACYER 10
           RP ACY R
Sbjct: 592 RPGACYSR 599


>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)

Query: 3   RPRACYER 10
           RP ACY R
Sbjct: 592 RPGACYSR 599


>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)

Query: 3   RPRACYER 10
           RP ACY R
Sbjct: 591 RPGACYSR 598


>sp|NRAM_I75A3|NEURAMINIDASE A virus (strain A/Victoria/3/1975

Query: 4   PRACYE 9
           PR CY+
Sbjct: 126 PRKCYQ 131


>sp|NCAP_INBAC|NUCLEOPROTEIN B virus (strain B/Ann

Query: 1   DLRPRACYER 10
           D+R +  YE+
Sbjct: 270 DIRAKTAYEK 279


>sp|NCAP_INBAD|NUCLEOPROTEIN B virus (strain B/Ann

Query: 1   DLRPRACYER 10
           D+R +  YE+
Sbjct: 270 DIRAKTAYEK 279


>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2

Query: 3   RPRACYER 10
           RP  CY R
Sbjct: 577 RPGTCYSR 584


>sp|GAG_SFV3L|GAG polyprotein|Simian foamy virus type 3

Query: 1   DLRPR 5
           DLRPR
Sbjct: 526 DLRPR 530


>sp|MATRX_RABVE|MATRIX protein|Rabies virus (strain ERA) (RABV)

Query: 1   DLRPRAC 7
           ++ PRAC
Sbjct: 172 NMNPRAC 178


>sp|US10_HCMVM|MEMBRANE glycoprotein US10|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   DLRPRACYER 10
            L  R CYER
Sbjct: 117 TLASRDCYER 126


>sp|US10_HCMVA|UNIQUE short US10 glycoprotein|Human cytomegalovirus (strain AD169)

Query: 1   DLRPRACYER 10
            L  R CYER
Sbjct: 117 TLASRDCYER 126


>sp|MATRX_RABVS|MATRIX protein|Rabies virus (strain SAD B19)

Query: 1   DLRPRAC 7
           ++ PRAC
Sbjct: 172 NMNPRAC 178


>sp|DUT_HHV2H|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 2 (strain

Query: 4   PRACY 8
           P ACY
Sbjct: 250 PEACY 254




61|SequenceR|310|301|LPQIIDLRPR

>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 2    PQIIDLRPR 10
            P+II L PR
Sbjct: 1276 PEIITLHPR 1284


>sp|CEP3_VZVO|CYTOPLASMIC envelopment protein 3|Varicella-zoster virus (strain Oka vaccine)

Query: 2  PQIIDLRPR 10
          P++ID+ P+
Sbjct: 58 PRVIDVTPK 66


>sp|CEP3_VZVD|CYTOPLASMIC envelopment protein 3|Varicella-zoster virus (strain Dumas)

Query: 2  PQIIDLRPR 10
          P++ID+ P+
Sbjct: 58 PRVIDVTPK 66


>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 2    PQIIDLRPR 10
            P IIDL P+
Sbjct: 1683 PWIIDLNPQ 1691


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 2    PQIIDLRPR 10
            P IIDL P+
Sbjct: 1683 PWIIDLNPQ 1691


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 2    PQIIDLRPR 10
            P+I+  RPR
Sbjct: 1380 PEIVYRRPR 1388


>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)

Query: 1   LPQIIDL 7
           +P+IIDL
Sbjct: 150 VPEIIDL 156


>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain

Query: 1   LPQIIDL 7
           +P+IIDL
Sbjct: 150 VPEIIDL 156


>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)

Query: 1   LPQIIDL 7
           +P+IIDL
Sbjct: 150 VPEIIDL 156


>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)

Query: 3  QIIDLRP 9
          Q++ LRP
Sbjct: 13 QVVSLRP 19


>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)

Query: 2   PQIIDLRP 9
           PQI+D  P
Sbjct: 319 PQIMDFAP 326


>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain

Query: 2   PQIIDLRP 9
           PQI+D  P
Sbjct: 319 PQIMDFAP 326


>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain

Query: 2   PQIIDLRP 9
           PQI+D  P
Sbjct: 319 PQIMDFAP 326


>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain

Query: 2   PQIIDLRP 9
           PQI+D  P
Sbjct: 319 PQIMDFAP 326


>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)

Query: 2   PQIIDLRP 9
           PQI+D  P
Sbjct: 319 PQIMDFAP 326


>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2   PQIIDLRP 9
           PQ + LRP
Sbjct: 676 PQAVGLRP 683


>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2   PQIIDLRP 9
           PQ + LRP
Sbjct: 675 PQAVGLRP 682


>sp|ORF3_HEVME|PROTEIN ORF3|Hepatitis E virus genotype 2

Query: 1  LPQIIDLRP 9
          LPQ + LRP
Sbjct: 67 LPQTLPLRP 75


>sp|VE7_HPV27|PROTEIN E7|Human papillomavirus 27

Query: 1  LPQIIDL 7
          +P+IIDL
Sbjct: 18 IPEIIDL 24


>sp|VE7_HPV57|PROTEIN E7|Human papillomavirus 57

Query: 1  LPQIIDL 7
          +P+I+DL
Sbjct: 18 IPEIVDL 24


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1    LPQIIDLRPR 10
            +P+I + RPR
Sbjct: 1468 VPEIQNKRPR 1477


>sp|VE7_HPV2A|PROTEIN E7|Human papillomavirus type 2a

Query: 1  LPQIIDL 7
          +P+I+DL
Sbjct: 18 IPEIVDL 24


>sp|PKG1_ADE02|PACKAGING protein 1|Human adenovirus C serotype 2

Query: 1   LPQIIDLRPR 10
           +PQ   LRPR
Sbjct: 233 IPQSGTLRPR 242


>sp|PKG1_ADE05|PACKAGING protein 1|Human adenovirus C serotype 5

Query: 1   LPQIIDLRPR 10
           +PQ   LRPR
Sbjct: 233 IPQSGTLRPR 242




62|SequenceR|315|306|ECTESLPQII

>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1    ECTESLPQI 9
            EC+ SLP +
Sbjct: 1711 ECSASLPYV 1719


>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)

Query: 1   ECTESLP 7
           +CTE+LP
Sbjct: 605 KCTETLP 611


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1    ECTESLP 7
            EC+ SLP
Sbjct: 1711 ECSASLP 1717


>sp|BILF1_EBVB9|G-PROTEIN coupled receptor BILF1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   ECTESL 6
           +CTESL
Sbjct: 257 DCTESL 262


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   ECTESLPQI 9
           E TE+LP++
Sbjct: 951 EKTENLPEL 959


>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 1   ECTESLPQI 9
           E TE+LP++
Sbjct: 951 EKTENLPEL 959


>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)

Query: 5   SLPQII 10
           SLPQ+I
Sbjct: 451 SLPQVI 456


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    ECTESLPQI 9
            EC   LP I
Sbjct: 1710 ECASQLPYI 1718


>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2  CTESLPQI 9
          C E LP++
Sbjct: 84 CDEGLPEL 91


>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1   ECTESLPQII 10
            CT  LP ++
Sbjct: 158 RCTSGLPSLM 167


>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1   ECTESLPQII 10
            CT  LP ++
Sbjct: 158 RCTSGLPSLM 167


>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1   ECTESLPQII 10
            CT  LP ++
Sbjct: 158 RCTSGLPSLM 167


>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1   ECTESLPQII 10
            CT  LP ++
Sbjct: 158 RCTSGLPSLM 167


>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1   ECTESLPQII 10
            CT  LP ++
Sbjct: 158 RCTSGLPSLM 167


>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1   ECTESLPQII 10
            CT  LP ++
Sbjct: 158 RCTSGLPSLM 167


>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain

Query: 1   ECTESLPQII 10
            CT  LP ++
Sbjct: 158 RCTSGLPSLM 167




63|SequenceR|320|311|DSSIEECTES

>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain

Query: 3   SIEECTES 10
           S+E+C ES
Sbjct: 104 SVEQCKES 111


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 4    IEECTES 10
            +EEC++S
Sbjct: 1716 MEECSQS 1722


>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 3   SIEECTES 10
           S+E+C ES
Sbjct: 104 SVEQCKES 111


>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 3   SIEECTES 10
           S+E+C ES
Sbjct: 104 SVEQCKES 111


>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 3   SIEECTES 10
           S+E+C ES
Sbjct: 104 SVEQCKES 111


>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 3   SIEECTES 10
           S+E+C ES
Sbjct: 104 SVEQCKES 111


>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 3   SIEECTES 10
           S+E+C ES
Sbjct: 104 SVEQCKES 111


>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 3   SIEECTES 10
           S+E+C ES
Sbjct: 104 SVEQCRES 111


>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   SIEEC 7
           SIEEC
Sbjct: 185 SIEEC 189


>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)

Query: 1   DSSIEEC 7
           D+SI EC
Sbjct: 497 DASIAEC 503




64|SequenceR|325|316|RVTLADSSIE

>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 1   RVTLADSS 8
           RVTL+DS+
Sbjct: 409 RVTLSDSA 416


>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 2    VTLADS 7
            VTLADS
Sbjct: 1146 VTLADS 1151


>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 2    VTLADS 7
            VTLADS
Sbjct: 1146 VTLADS 1151




65|SequenceR|330|321|NEQFGRVTLA

>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)

Query: 1   NEQFGRVTLA 10
           N Q GR+ LA
Sbjct: 625 NSQIGRLALA 634


>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2   EQFGRVTLA 10
           EQFG  T+A
Sbjct: 361 EQFGNKTIA 369




66|SequenceR|335|326|YDRCENEQFG

>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40

Query: 3   RCENEQFG 10
           RC+NE +G
Sbjct: 203 RCQNEAWG 210


>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2

Query: 3   RCENEQFG 10
           RC+NE +G
Sbjct: 226 RCQNEAWG 233


>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5

Query: 3   RCENEQFG 10
           RC+NE +G
Sbjct: 226 RCQNEAWG 233


>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P

Query: 3   RCENEQFG 10
           RC + QFG
Sbjct: 297 RCTDPQFG 304


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1    YDRCENE 7
            YD CE E
Sbjct: 3579 YDECETE 3585


>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003

Query: 1   YDRCENE 7
           Y RC+NE
Sbjct: 487 YHRCDNE 493


>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3   RCENEQFG 10
           RC + QFG
Sbjct: 298 RCTDVQFG 305


>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)

Query: 3   RCENEQFG 10
           RC+ + FG
Sbjct: 339 RCQEDDFG 346


>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   RCENEQFG 10
           RC+ + FG
Sbjct: 339 RCQEDDFG 346


>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)

Query: 3   RCENEQFG 10
           +CE+ QFG
Sbjct: 446 QCEHLQFG 453


>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1

Query: 2  DRCENEQ 8
          +RCEN+ 
Sbjct: 83 ERCENKH 89


>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   YDRCENEQF 9
           YDR   +QF
Sbjct: 285 YDRLPRDQF 293


>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82

Query: 1   YDRCENEQFG 10
           YD  EN +F 
Sbjct: 125 YDDTENSRFA 134


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 1   YDRCENEQF 9
           Y R E E+F
Sbjct: 474 YQRSEEEKF 482


>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17

Query: 4   CENEQ 8
           CENEQ
Sbjct: 175 CENEQ 179


>sp|RUVV_VACCA|HOLLIDAY junction resolvase|Vaccinia virus (strain Ankara) (VACV)

Query: 1   YDRCENEQF 9
           Y+RC++  +
Sbjct: 175 YNRCKSRNY 183


>sp|VHR2_YLDV|PROBABLE host range protein 2|Yaba-like disease virus (YLDV)

Query: 2   DRCENEQF 9
           D C+ EQF
Sbjct: 140 DDCDKEQF 147


>sp|RUVV_VACCC|RESOLVASE OPG149|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   YDRCENEQF 9
           Y+RC++  +
Sbjct: 164 YNRCKSRNY 172


>sp|RUVV_VARV|RESOLVASE OPG149|Variola virus

Query: 1   YDRCENEQF 9
           Y+RC++  +
Sbjct: 175 YNRCKSRNY 183


>sp|RUVV_VAR67|RESOLVASE OPG149|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   YDRCENEQF 9
           Y+RC++  +
Sbjct: 175 YNRCKSRNY 183




67|SequenceR|340|331|SYELHYDRCE

>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 1    SYELHYDRCE 10
            SYE  Y +C+
Sbjct: 1887 SYETEYQKCK 1896


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 1    SYELHYDRCE 10
            SYE  Y +C+
Sbjct: 1895 SYETEYPKCK 1904


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 1    SYELHYDRCE 10
            SYE  Y +C+
Sbjct: 1891 SYETEYPKCK 1900


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 1    SYELHYDRCE 10
            SYE  Y +C+
Sbjct: 1895 SYETEYPKCK 1904


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 4   LHYDRC 9
           +HY RC
Sbjct: 196 IHYGRC 201


>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 820 YELHPDK 826


>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 829 YELHPDK 835


>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 829 YELHPDK 835


>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 819 YELHPDK 825


>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 820 YELHPDK 826


>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 812 YELHPDK 818


>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 817 YELHPDK 823


>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 816 YELHPDK 822


>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 816 YELHPDK 822


>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 820 YELHPDK 826


>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 818 YELHPDK 824


>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 816 YELHPDK 822


>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 819 YELHPDK 825


>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 820 YELHPDK 826


>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 814 YELHPDK 820


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 825 YELHPDK 831


>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 824 YELHPDK 830


>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 818 YELHPDK 824


>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 819 YELHPDK 825


>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 823 YELHPDK 829


>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 819 YELHPDK 825


>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 823 YELHPDK 829


>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 819 YELHPDK 825


>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 831 YELHPDK 837


>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 819 YELHPDK 825


>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 831 YELHPDK 837


>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 831 YELHPDK 837


>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 818 YELHPDK 824


>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 821 YELHPDK 827


>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 819 YELHPDK 825


>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 814 YELHPDK 820


>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 814 YELHPDK 820


>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 814 YELHPDK 820


>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 815 YELHPDK 821


>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   YELHYDR 8
           YELH D+
Sbjct: 819 YELHPDK 825


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 5    HYDRCE 10
            HY +CE
Sbjct: 1222 HYQQCE 1227


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 1    SYELHYDR 8
            +Y+L++DR
Sbjct: 2173 NYQLNFDR 2180


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 4   LHYDRC 9
           +HY RC
Sbjct: 202 VHYGRC 207


Query: 1    SYELHYDRCE 10
            SY+  Y +C+
Sbjct: 1893 SYDTEYPKCK 1902


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 4   LHYDRC 9
           +HY RC
Sbjct: 197 VHYGRC 202


>sp|BEL1_SFV3L|PROTEIN Bel-1|Simian foamy virus type 3

Query: 5   HYDRC 9
           HY+RC
Sbjct: 179 HYERC 183


>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2

Query: 1   SYELHYDRC 9
           S  LH+ +C
Sbjct: 145 SLRLHFSKC 153


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 5    HYDRCE 10
            HY +CE
Sbjct: 1227 HYQQCE 1232


>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 5    HYDRCE 10
            HY +CE
Sbjct: 1222 HYQQCE 1227


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 5    HYDRCE 10
            HY +CE
Sbjct: 1222 HYQQCE 1227


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 5    HYDRCE 10
            HY +CE
Sbjct: 1222 HYQQCE 1227


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 1    SYELHYDRCE 10
            SY+  Y +C+
Sbjct: 1893 SYDTEYPKCK 1902


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 1    SYELHYDRCE 10
            SY+  Y +C+
Sbjct: 1894 SYDTEYPKCK 1903


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 1    SYELHYDRCE 10
            SY+  Y +C+
Sbjct: 1894 SYDTEYPKCK 1903


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 1    SYELHYDRCE 10
            SY+  Y +C+
Sbjct: 1894 SYDTEYPKCK 1903


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 1    SYELHYDRCE 10
            SY+  Y +C+
Sbjct: 1894 SYDTEYPKCK 1903


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 1    SYELHYDRCE 10
            SY+  Y +C+
Sbjct: 1887 SYDSEYQKCK 1896


>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   SYELHYDR 8
           SY+  YDR
Sbjct: 280 SYQFCYDR 287


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 5    HYDRCE 10
            HY +CE
Sbjct: 1224 HYQQCE 1229


>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong

Query: 4  LHYDRCE 10
          LH+ +CE
Sbjct: 35 LHFKQCE 41


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 5    HYDRCE 10
            HY +CE
Sbjct: 1224 HYQQCE 1229


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 5    HYDRCE 10
            HY +CE
Sbjct: 1224 HYQQCE 1229


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 5    HYDRCE 10
            HY +CE
Sbjct: 1224 HYQQCE 1229


>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3

Query: 1   SYELHYDRC 9
           S  LH+ +C
Sbjct: 149 SLHLHFSKC 157


>sp|RUVV_VARV|RESOLVASE OPG149|Variola virus

Query: 5   HYDRCE 10
           HY+RC+
Sbjct: 174 HYNRCK 179


>sp|RUVV_VAR67|RESOLVASE OPG149|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 5   HYDRCE 10
           HY+RC+
Sbjct: 174 HYNRCK 179


>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P

Query: 5   HYDRC 9
           H DRC
Sbjct: 588 HMDRC 592


>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3

Query: 1   SYELHYDRC 9
           S  LH+ +C
Sbjct: 147 SLHLHFSKC 155


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 5    HYDRC 9
            HYD C
Sbjct: 1876 HYDAC 1880


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 5    HYDRC 9
            HYD C
Sbjct: 1896 HYDAC 1900


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 5    HYDRC 9
            HYD C
Sbjct: 1926 HYDAC 1930


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 2    YELHYD 7
            +ELH+D
Sbjct: 3403 HELHWD 3408


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 2    YELHYD 7
            +ELH+D
Sbjct: 3403 HELHWD 3408


>sp|NCAP_CVHN1|NUCLEOPROTEIN coronavirus HKU1 (isolate N1)

Query: 2   YELHY 6
           +ELHY
Sbjct: 344 FELHY 348


>sp|BEL1_SFV1|PROTEIN Bel-1|Simian foamy virus type 1

Query: 5   HYDRC 9
           HY+RC
Sbjct: 182 HYERC 186


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 5    HYDRC 9
            HYD C
Sbjct: 1896 HYDAC 1900


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 5    HYDRC 9
            HYD C
Sbjct: 1876 HYDAC 1880


>sp|PG172_VARV|PROTEIN A43|Variola virus

Query: 1   SYELHYDRC 9
           +Y LH  +C
Sbjct: 137 TYSLHRSKC 145


>sp|PG172_VAR67|PROTEIN A43|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   SYELHYDRC 9
           +Y LH  +C
Sbjct: 137 TYSLHRSKC 145


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 5    HYDRC 9
            HYD C
Sbjct: 1926 HYDAC 1930




68|SequenceR|345|336|LSEGESYELH

>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1   LSEGESYELH 10
           L EG+S E+H
Sbjct: 389 LIEGKSIEVH 398


>sp|VPAP_HCMVM|DNA polymerase processivity factor|Human cytomegalovirus (strain

Query: 1   LSEGESYELH 10
           LS  E YE H
Sbjct: 366 LSSKEKYEQH 375


>sp|VPAP_HCMVA|DNA polymerase processivity factor|Human cytomegalovirus (strain AD169)

Query: 1   LSEGESYELH 10
           LS  E YE H
Sbjct: 366 LSSKEKYEQH 375


>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)

Query: 1   LSEGESYELH 10
             EGE+ +LH
Sbjct: 283 FDEGETKKLH 292


>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82

Query: 1   LSEGESYELH 10
           +  GE YEL 
Sbjct: 365 IRHGEEYELQ 374


>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69

Query: 1   LSEGESYELH 10
           +  GE YEL 
Sbjct: 366 IRHGEEYELQ 375


>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51

Query: 1   LSEGESYELH 10
           +  GE YEL 
Sbjct: 364 IRHGEEYELQ 373


>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26

Query: 1   LSEGESYELH 10
           +  GE YEL 
Sbjct: 365 IRHGEEYELQ 374


>sp|US10_HCMVM|MEMBRANE glycoprotein US10|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  LSEGESYELH 10
          L +GE++E H
Sbjct: 68 LHDGENHERH 77


>sp|US10_HCMVA|UNIQUE short US10 glycoprotein|Human cytomegalovirus (strain AD169)

Query: 1  LSEGESYELH 10
          L +GE++E H
Sbjct: 68 LHDGENHERH 77


>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 1   LSEGESYELH 10
           LSEGE  +L+
Sbjct: 678 LSEGEDADLY 687


>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 1   LSEGESY 7
           L EGE+Y
Sbjct: 789 LKEGETY 795


>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35

Query: 1   LSEGESYELH 10
           L  GE Y+L 
Sbjct: 362 LRHGEEYDLQ 371


>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29

Query: 1   LSEGESYELH 10
           L  GE Y+L 
Sbjct: 365 LRHGEEYDLQ 374


>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28

Query: 1   LSEGESYELH 10
           L  GE Y+L 
Sbjct: 363 LRHGEEYDLQ 372


>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16

Query: 1   LSEGESYELH 10
           L  GE Y+L 
Sbjct: 364 LRHGEEYDLQ 373


>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10

Query: 1   LSEGESYELH 10
           L  GE Y+L 
Sbjct: 392 LRHGEEYDLQ 401


>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3

Query: 1   LSEGESYELH 10
           L  GE Y+L 
Sbjct: 393 LRHGEEYDLQ 402


>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1

Query: 2   SEGESYELH 10
           S G + ELH
Sbjct: 297 SSGRAVELH 305


>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2

Query: 2   SEGESYELH 10
           S G + ELH
Sbjct: 297 SSGHAVELH 305


>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C

Query: 2   SEGESYELH 10
           S G + ELH
Sbjct: 297 SSGHAVELH 305


>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2

Query: 2   SEGESYELH 10
           S G + ELH
Sbjct: 297 SSGHAVELH 305


>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2

Query: 2   SEGESYELH 10
           S G + ELH
Sbjct: 297 SSGHAVELH 305


>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1

Query: 2   SEGESYELH 10
           S G + ELH
Sbjct: 297 SSGHAVELH 305




69|SequenceR|350|341|SVIYFLSEGE

>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 2    VIYFLSEG 9
            V+YF+ EG
Sbjct: 1691 VLYFIGEG 1698


>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41

Query: 2   VIYFLSEG 9
           V+YF S+G
Sbjct: 443 VMYFYSDG 450


>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40

Query: 2   VIYFLSEG 9
           V+YF S+G
Sbjct: 428 VMYFYSDG 435


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 3    IYFLSEGE 10
            +YF SEG+
Sbjct: 1602 LYFPSEGQ 1609


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 3    IYFLSEGE 10
            +YF SEG+
Sbjct: 1602 LYFPSEGQ 1609


>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28

Query: 3   IYFLSEGE 10
           +Y++ EGE
Sbjct: 159 LYYIHEGE 166


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 3    IYFLSEGE 10
            +YF SEG+
Sbjct: 1602 LYFPSEGQ 1609


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 3    IYFLSEGE 10
            +YF SEG+
Sbjct: 1602 LYFPSEGQ 1609


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 3    IYFLSEGE 10
            +YF SEG+
Sbjct: 1602 LYFPSEGQ 1609


>sp|PG039_VACCC|INTERFERON antagonist OPG040|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   VIYFLSE 8
           V YFLSE
Sbjct: 144 VSYFLSE 150


>sp|PG039_MONPV|INTERFERON antagonist OPG039|Monkeypox virus (MPXV)

Query: 2   VIYFLSE 8
           V YFLSE
Sbjct: 144 VSYFLSE 150


>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)

Query: 5   FLSEGE 10
           F+SEGE
Sbjct: 440 FVSEGE 445


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 2   VIYFLSEG 9
           V YF+S+G
Sbjct: 565 VAYFVSDG 572


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 2   VIYFLSEG 9
           V YF+S+G
Sbjct: 565 VAYFVSDG 572




70|SequenceR|355|346|VVDRPSVIYF

>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)

Query: 1  VVDRPSVIYF 10
          V  RPSV YF
Sbjct: 76 VKGRPSVSYF 85


>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain

Query: 1   VVDRPSVIY 9
           +VD P VIY
Sbjct: 340 LVDHPDVIY 348


>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain

Query: 1   VVDRPSVIY 9
           +VD P VIY
Sbjct: 340 LVDHPDVIY 348


>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 2   VDRPSVIYF 10
           +D+P +I+F
Sbjct: 174 LDKPEMIFF 182


>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   VVDRPSVIY 9
           V  RPSV Y
Sbjct: 394 VYGRPSVFY 402


>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)

Query: 1    VVDRPSV 7
            VVD PSV
Sbjct: 1099 VVDAPSV 1105


>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain

Query: 1   VVDRPSVI 8
           VVD P+VI
Sbjct: 732 VVDPPAVI 739


>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka

Query: 1   VVDRPSVI 8
           VVD P+VI
Sbjct: 732 VVDPPAVI 739


>sp|VL2_HPV38|MINOR capsid protein L2|Human papillomavirus 38

Query: 3   DRPSVIY 9
           +RP++IY
Sbjct: 486 ERPAIIY 492


>sp|NS8_SARS2|ORF8 protein|Severe acute respiratory syndrome coronavirus

Query: 1  VVDRPSVIYF 10
          VVD P  I+F
Sbjct: 32 VVDDPCPIHF 41




71|SequenceR|360|351|REKAVVVDRP

>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4

Query: 2    EKAVVVDRP 10
            EK VVVD P
Sbjct: 1193 EKCVVVDAP 1201


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    REKAVVVDR 9
            R+K V +DR
Sbjct: 2467 RQKKVTIDR 2475


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 3    KAVVVDR 9
            KAV++DR
Sbjct: 1942 KAVIIDR 1948


>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)

Query: 3   KAVVVDR 9
           KAV++DR
Sbjct: 611 KAVIIDR 617


>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus

Query: 1   REKAVVVD 8
           + KAVV+D
Sbjct: 151 KNKAVVID 158




72|SequenceR|365|356|HDDQDREKAV

>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P

Query: 1   HDDQDREKAV 10
           HDD+ REKA+
Sbjct: 144 HDDKHREKAL 153


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 2    DDQDREKAV 10
            DD DRE +V
Sbjct: 2263 DDDDREISV 2271


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 1    HDDQDREKAV 10
            HD Q+R KA+
Sbjct: 2787 HDVQERIKAL 2796


>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16

Query: 1   HDDQDRE 7
           H+D+D+E
Sbjct: 623 HEDEDKE 629


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 1    HDDQDRE 7
            H+D DR+
Sbjct: 1110 HEDNDRD 1116


>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   DQDREK 8
           DQDR+K
Sbjct: 96  DQDRKK 101


>sp|VE2_HPV22|REGULATORY protein E2|Human papillomavirus 22

Query: 1   HDDQDREKAV 10
           H D++REK +
Sbjct: 408 HTDREREKCL 417


>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)

Query: 3   DQDREK 8
           DQDR+K
Sbjct: 96  DQDRKK 101




73|SequenceR|370|361|LLWDIHDDQD

>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   WDIHDDQ 9
           WDI D Q
Sbjct: 113 WDIRDSQ 119


>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)

Query: 3   WDIHDDQ 9
           WDI D Q
Sbjct: 113 WDIRDSQ 119


>sp|VE2_HPV38|REGULATORY protein E2|Human papillomavirus 38

Query: 2   LWDIHDDQD 10
           LW++H ++D
Sbjct: 184 LWEVHVNKD 192


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 2    LWDIHDDQ 9
            LW  H DQ
Sbjct: 1859 LWQAHTDQ 1866


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 2    LWDIHDDQ 9
            LW  H DQ
Sbjct: 1859 LWQAHTDQ 1866


>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1   LLWDIHDDQD 10
           +LW IH   D
Sbjct: 190 ILWGIHHPND 199


>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong

Query: 1   LLWDIHDDQD 10
           +LW IH   D
Sbjct: 190 ILWGIHHPND 199


>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky

Query: 1   LLWDIHDDQD 10
           +LW IH   D
Sbjct: 190 ILWGIHHPND 199


>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1   LLWDIHDDQD 10
           +LW IH   D
Sbjct: 190 ILWGIHHPND 199


>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea

Query: 1   LLWDIHDDQD 10
           +LW IH   D
Sbjct: 188 ILWGIHHPND 197


>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959

Query: 1   LLWDIHDDQD 10
           +LW IH   D
Sbjct: 190 ILWGIHHPND 199


>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong

Query: 1   LLWDIHDDQD 10
           +LW IH   D
Sbjct: 190 VLWGIHHPND 199


>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1   LLWDIHDDQD 10
           +LW IH   D
Sbjct: 190 VLWGIHHPND 199


>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1   LLWDIHDDQD 10
           +LW IH   D
Sbjct: 179 VLWGIHHPND 188


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 3   WDIHDD 8
           W +HDD
Sbjct: 173 WFVHDD 178


>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong

Query: 1   LLWDIHDDQD 10
           +LW IH   D
Sbjct: 190 VLWGIHHPND 199


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 3   WDIHDD 8
           W +HDD
Sbjct: 173 WFVHDD 178


>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996

Query: 1   LLWDIHDDQD 10
           +LW IH   D
Sbjct: 190 VLWGIHHPND 199


>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky

Query: 1   LLWDIHDDQD 10
           +LW IH   D
Sbjct: 179 VLWGIHHPND 188


>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69

Query: 1   LLWDIH 6
           L WD+H
Sbjct: 182 LQWDVH 187


>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002

Query: 1   LLWDIHDDQD 10
           +LW IH   D
Sbjct: 186 VLWGIHHPND 195


>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1   LLWDIHDDQD 10
           +LW IH   D
Sbjct: 179 VLWGIHHPND 188


>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1   LLWDIHDDQD 10
           +LW IH   D
Sbjct: 179 VLWGIHHPND 188


>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003

Query: 1   LLWDIHDDQD 10
           +LW IH   D
Sbjct: 190 VLWGIHHPND 199


>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1   LLWDIHDDQD 10
           +LW IH   D
Sbjct: 190 VLWGIHHPND 199


>sp|VL2_HPV2A|MINOR capsid protein L2|Human papillomavirus type 2a

Query: 1   LLWDIHDDQD 10
           +L+D++ D D
Sbjct: 349 MLYDVYADSD 358


>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005

Query: 1   LLWDIHDDQD 10
           +LW IH   D
Sbjct: 190 VLWGIHHPND 199


>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   WDIHDD 8
           WD HD+
Sbjct: 385 WDRHDE 390


>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   WDIHDD 8
           WD HD+
Sbjct: 385 WDRHDE 390


>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42

Query: 3   WDIHD 7
           W++HD
Sbjct: 185 WEVHD 189


>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 3   WDIHDD 8
           WD HD+
Sbjct: 375 WDRHDE 380


>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 1   LLWDIHDDQD 10
           +LW IH   D
Sbjct: 182 VLWGIHHPND 191


>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P

Query: 3   WDIHDDQD 10
           WD+  D+D
Sbjct: 452 WDMLSDKD 459


>sp|VL2_HPV31|MINOR capsid protein L2|Human papillomavirus 31

Query: 2   LWDIHDDQD 10
           L+DI+ D D
Sbjct: 352 LYDIYADTD 360


>sp|VL2_HPV70|MINOR capsid protein L2|Human papillomavirus type 70

Query: 2   LWDIHDDQD 10
           L+DI+ D D
Sbjct: 346 LYDIYADAD 354


>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32

Query: 3   WDIHD 7
           W++HD
Sbjct: 185 WEVHD 189


>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2

Query: 2   LWDIHDDQD 10
            W+  DD D
Sbjct: 573 FWNSRDDTD 581


>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New

Query: 1   LLWDIHDDQD 10
           ++W IH   D
Sbjct: 188 VIWGIHHPND 197


>sp|NS1_I96A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 3   WDIHDD 8
           W IHD+
Sbjct: 203 WGIHDE 208


>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5

Query: 1   LLWDIHDD 8
            LWD  DD
Sbjct: 410 FLWDDIDD 417


>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2

Query: 1   LLWDIHDD 8
            LWD  DD
Sbjct: 410 FLWDDIDD 417


>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 1    LLWDIH 6
            +LWD H
Sbjct: 1049 ILWDKH 1054


>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 2   LWDIH 6
           +W+IH
Sbjct: 173 MWEIH 177


>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   LWDIH 6
           +W+IH
Sbjct: 173 MWEIH 177


>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   LWDIH 6
           +W+IH
Sbjct: 173 MWEIH 177


>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 1    LLWDIH 6
            +LWD H
Sbjct: 1049 ILWDKH 1054


>sp|VL2_HPV27|MINOR capsid protein L2|Human papillomavirus 27

Query: 1   LLWDIHDDQD 10
           +L+D++ D D
Sbjct: 348 VLYDVYADPD 357


>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988

Query: 1   LLWDIH 6
           +LW IH
Sbjct: 192 VLWGIH 197


>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New

Query: 1   LLWDIH 6
           +LW IH
Sbjct: 192 VLWGIH 197


>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967

Query: 1   LLWDIH 6
           +LW IH
Sbjct: 192 VLWGIH 197


>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961

Query: 1   LLWDIH 6
           +LW IH
Sbjct: 192 VLWGIH 197


>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936

Query: 1   LLWDIH 6
           +LW IH
Sbjct: 192 VLWGIH 197


>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto

Query: 1   LLWDIH 6
           +LW IH
Sbjct: 191 VLWGIH 196


>sp|GL_HHV11|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain 17)

Query: 1  LLWDIH 6
          +LWD H
Sbjct: 82 VLWDRH 87


>sp|GL_HHV1K|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain KOS)

Query: 1  LLWDIH 6
          +LWD H
Sbjct: 82 VLWDRH 87




74|SequenceR|375|366|YKKKELLWDI

>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1

Query: 1  YKKKELLW 8
          YK K L+W
Sbjct: 29 YKMKHLIW 36


>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain

Query: 1   YKKKELLWDI 10
           Y KKE  +DI
Sbjct: 501 YPKKEFEYDI 510


>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate

Query: 1   YKKKELLWDI 10
           Y KKE  +DI
Sbjct: 504 YPKKEFEYDI 513


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 4   KELLWD 9
           KELLW+
Sbjct: 455 KELLWE 460


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 4   KELLWD 9
           KELLW+
Sbjct: 455 KELLWE 460


>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)

Query: 1   YKKKELLW 8
           Y+K E LW
Sbjct: 765 YEKPEELW 772


>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)

Query: 1   YKKKELLW 8
           Y+K E LW
Sbjct: 765 YEKPEELW 772


>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)

Query: 2   KKKELLW 8
           KK+ +LW
Sbjct: 433 KKRSILW 439


>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1  YKKKELLW 8
          YK K L+W
Sbjct: 29 YKMKHLIW 36


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 1    YKKKELL 7
            YKKK+L+
Sbjct: 1842 YKKKDLI 1848


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 1    YKKKELL 7
            YKKK+L+
Sbjct: 1834 YKKKDLI 1840


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 1    YKKKELL 7
            YKKK+L+
Sbjct: 1833 YKKKDLI 1839


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 4   KELLWD 9
           K+LLW+
Sbjct: 456 KDLLWE 461


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 4   KELLWD 9
           K+LLW+
Sbjct: 456 KDLLWE 461


>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)

Query: 2   KKKELLW 8
           ++KE++W
Sbjct: 131 RRKEIMW 137


>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)

Query: 2   KKKELLW 8
           ++KE++W
Sbjct: 131 RRKEIMW 137


>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 2   KKKELLW 8
           ++KE++W
Sbjct: 131 RRKEIMW 137


>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann

Query: 2   KKKELLW 8
           ++KE++W
Sbjct: 131 RRKEIMW 137


>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 1    YKKKELLWD 9
            YKK  L W+
Sbjct: 1268 YKKAVLKWN 1276


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 4   KELLWD 9
           K+LLW+
Sbjct: 455 KDLLWE 460


>sp|VE6_HPV05|PROTEIN E6|Human papillomavirus 5

Query: 1  YKKKELLW 8
          YK+  L+W
Sbjct: 58 YKRLSLIW 65


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 4   KELLWD 9
           K+LLW+
Sbjct: 455 KDLLWE 460




75|SequenceR|380|371|MLAEEYKKKE

>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    MLAEEYKKK 9
            MLAE++K+K
Sbjct: 1723 MLAEQFKQK 1731


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1    MLAEEYKKK 9
            MLAE++K+K
Sbjct: 1723 MLAEQFKQK 1731


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1    MLAEEYKKK 9
            MLAE++K+K
Sbjct: 1723 MLAEQFKQK 1731


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 2    LAEEYKKK 9
            LAE++K+K
Sbjct: 1726 LAEQFKQK 1733


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    LAEEYKKK 9
            LAE++K+K
Sbjct: 1724 LAEQFKQK 1731


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    LAEEYKKK 9
            LAE++K+K
Sbjct: 1724 LAEQFKQK 1731


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    LAEEYKKK 9
            LAE++K+K
Sbjct: 1724 LAEQFKQK 1731


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    LAEEYKKK 9
            LAE++K+K
Sbjct: 1724 LAEQFKQK 1731


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    LAEEYKKK 9
            LAE++K+K
Sbjct: 1724 LAEQFKQK 1731


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2    LAEEYKKK 9
            LAE++K+K
Sbjct: 1724 LAEQFKQK 1731


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 2    LAEEYKKK 9
            LAE++K+K
Sbjct: 1724 LAEQFKQK 1731


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    LAEEYKKK 9
            LAE++K+K
Sbjct: 1724 LAEQFKQK 1731


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2    LAEEYKKK 9
            LAE++K+K
Sbjct: 1724 LAEQFKQK 1731


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 1    MLAEEYKKK 9
            ++AE++K+K
Sbjct: 1724 LIAEQFKQK 1732


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 3   AEEYKKKE 10
           A  YKKKE
Sbjct: 135 APAYKKKE 142


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 2    LAEEYKKK 9
            +AE++K+K
Sbjct: 1722 IAEQFKQK 1729


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 2    LAEEYKKK 9
            +AE++K+K
Sbjct: 1729 IAEQFKQK 1736


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 2    LAEEYKKK 9
            +AE++K+K
Sbjct: 1725 IAEQFKEK 1732




76|SequenceR|385|376|SIEAAMLAEE

>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 1   SIEAAMLAEE 10
           ++EA+MLA+E
Sbjct: 102 TLEASMLAKE 111


>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)

Query: 1   SIEAAMLAE 9
           +IEA+ LAE
Sbjct: 341 NIEASQLAE 349


>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 1   SIEAAMLAE 9
           +IEA+ LAE
Sbjct: 341 NIEASQLAE 349


>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 1   SIEAAMLAE 9
           +IEA+ LAE
Sbjct: 341 NIEASQLAE 349


>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 1   SIEAAMLAE 9
           +IEA+ LAE
Sbjct: 341 NIEASQLAE 349


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 1   SIEAAMLAE 9
           +IEA+ LAE
Sbjct: 341 NIEASQLAE 349


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 1   SIEAAMLAE 9
           +IEA+ LAE
Sbjct: 341 NIEASQLAE 349


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 1   SIEAAMLAE 9
           +IEA+ LAE
Sbjct: 341 NIEASQLAE 349


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 1   SIEAAMLAE 9
           +IEA+ LAE
Sbjct: 341 NIEASQLAE 349


>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)

Query: 1   SIEAAMLAE 9
           +IEA  LAE
Sbjct: 269 NIEAVQLAE 277




77|SequenceR|390|381|KINKQSIEAA

>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 2   INKQSIE 8
           INKQS+E
Sbjct: 150 INKQSVE 156


>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate

Query: 2   INKQSIE 8
           INKQS+E
Sbjct: 158 INKQSVE 164


>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)

Query: 2   INKQSIE 8
           INKQS+E
Sbjct: 158 INKQSVE 164


>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   INKQSIE 8
           INKQS+E
Sbjct: 158 INKQSVE 164


>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)

Query: 2   INKQSIE 8
           INKQS+E
Sbjct: 158 INKQSVE 164


>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)

Query: 2   INKQSIE 8
           INKQS+E
Sbjct: 158 INKQSVE 164


>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /

Query: 2   INKQSIE 8
           INKQS+E
Sbjct: 158 INKQSVE 164


>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus

Query: 2   INKQSIE 8
           INKQS+E
Sbjct: 158 INKQSVE 164


>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)

Query: 2   INKQSIE 8
           INKQS+E
Sbjct: 158 INKQSVE 164


>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)

Query: 1    KINKQS 6
            KINKQS
Sbjct: 1132 KINKQS 1137




78|SequenceR|395|386|LIKHRKINKQ

>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 1    LIKHRKINK 9
            L++H+ INK
Sbjct: 2193 LMRHKGINK 2201


>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate

Query: 1  LIKHRKINKQ 10
          +IKH  +NKQ
Sbjct: 54 VIKHCDLNKQ 63


>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40

Query: 1  LIKHRKINKQ 10
          L+KH + N+Q
Sbjct: 26 LVKHEEENEQ 35


>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain

Query: 3  KHRKINK 9
          K R+INK
Sbjct: 4  KERRINK 10


>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain

Query: 3  KHRKINK 9
          K R+INK
Sbjct: 4  KERRINK 10




79|SequenceR|400|391|ALGIDLIKHR

>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 2   LGIDLIKH 9
           +GID IKH
Sbjct: 209 MGIDSIKH 216


>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 2   LGIDLIKH 9
           +GID IKH
Sbjct: 209 MGIDSIKH 216


>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann

Query: 2   LGIDLIKH 9
           +GID IKH
Sbjct: 209 MGIDSIKH 216


>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain

Query: 1   ALGIDLIKH 9
           A+G+++I+H
Sbjct: 507 AMGLNVIRH 515


>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 4  IDLIKHR 10
          +D+++HR
Sbjct: 93 VDMVRHR 99


>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4  IDLIKHR 10
          +D+++HR
Sbjct: 93 VDMVRHR 99


>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4  IDLIKHR 10
          +D+++HR
Sbjct: 93 VDMVRHR 99


>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4   IDLIKH 9
           IDL+KH
Sbjct: 291 IDLLKH 296


>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4   IDLIKH 9
           IDL+KH
Sbjct: 291 IDLLKH 296


>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4   IDLIKH 9
           IDL+KH
Sbjct: 291 IDLLKH 296


>sp|NCAP_HRSVA|NUCLEOPROTEIN respiratory syncytial virus A

Query: 1   ALGIDLIKHR 10
           A G+D+  HR
Sbjct: 92  ANGVDVTTHR 101


>sp|NCAP_HRSV|NUCLEOPROTEIN respiratory syncytial virus

Query: 1   ALGIDLIKHR 10
           A G+D+  HR
Sbjct: 92  ANGVDVTTHR 101




80|SequenceR|405|396|LHNIYALGID

>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   LHNIYALGI 9
           LH++Y+L +
Sbjct: 528 LHSLYSLSV 536


>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   LHNIYALGI 9
           LH++Y+L +
Sbjct: 528 LHSLYSLSV 536


>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   LHNIYALGI 9
           LH++Y+L +
Sbjct: 528 LHSLYSLSV 536


>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 1   LHNIYALGID 10
           L   YALG+D
Sbjct: 988 LRERYALGMD 997


>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)

Query: 1  LHNIYALGID 10
          LH +Y  GI+
Sbjct: 31 LHTVYLNGIN 40


>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain

Query: 1  LHNIYALGID 10
          LH +Y  GI+
Sbjct: 31 LHTVYLNGIN 40


>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)

Query: 1  LHNIYALGID 10
          LH +Y  GI+
Sbjct: 31 LHTVYLNGIN 40


>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)

Query: 1  LHNIYALGID 10
          LH +Y  GI+
Sbjct: 31 LHTVYLNGIN 40


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 1   LHNIYALGID 10
           L  IY +G D
Sbjct: 926 LREIYVMGAD 935


>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)

Query: 3   NIYALGID 10
           N+Y+ G D
Sbjct: 178 NVYSQGFD 185


>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   NIYALGID 10
           N+Y+ G D
Sbjct: 178 NVYSQGFD 185




81|SequenceR|410|401|DGREVLHNIY

>sp|NCAP_SFSV|NUCLEOPROTEIN fever sicilian virus (SFS)

Query: 1  DGREVLHNI 9
          D R ++HN+
Sbjct: 34 DARTIIHNL 42


>sp|NEF_HV190|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1   DGREVL 6
           DGREVL
Sbjct: 177 DGREVL 182


>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   GREVLHNIY 10
            R V HN+Y
Sbjct: 676 ARSVAHNLY 684


>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   GREVLHNIY 10
            R V HN+Y
Sbjct: 676 ARSVAHNLY 684


>sp|PG191_MONPV|PROTEIN OPG191|Monkeypox virus (MPXV)

Query: 5  VLHNIY 10
          +LHNIY
Sbjct: 35 ILHNIY 40


>sp|PG191_VACCC|PROTEIN OPG191|Vaccinia virus (strain Copenhagen) (VACV)

Query: 5  VLHNIY 10
          +LHNIY
Sbjct: 35 ILHNIY 40


>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   DGREVLHNI 9
           DG+E+L  I
Sbjct: 450 DGKEILRPI 458


>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)

Query: 1   DGREVLHNIY 10
           +GR+ L N+Y
Sbjct: 161 EGRQSLINLY 170


>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)

Query: 2   GREVLH 7
           GR+V+H
Sbjct: 513 GRQVIH 518


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2    GREVLHNIY 10
            GR VL+N Y
Sbjct: 3002 GRWVLNNDY 3010


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2    GREVLHNIY 10
            GR VL+N Y
Sbjct: 3002 GRWVLNNDY 3010


>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 2   GREVLHNI 9
           GR +LH +
Sbjct: 343 GRSLLHEV 350


>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 2   GREVLHNI 9
           GR +LH +
Sbjct: 343 GRSLLHEV 350


>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)

Query: 1    DGREVLH 7
            +GR V+H
Sbjct: 1153 EGRSVIH 1159


>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   DGREVLHNI 9
           D R  +HN+
Sbjct: 503 DARSRIHNV 511




82|SequenceR|415|406|AAIDYDGREV

>sp|VC17_VACCC|ANKYRIN repeat protein C17/B23|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2  AIDYDGRE 9
          A+DY GRE
Sbjct: 18 AMDYCGRE 25


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 3   IDYDGREV 10
           IDY G EV
Sbjct: 903 IDYKGNEV 910


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 3   IDYDGREV 10
           IDY G EV
Sbjct: 912 IDYPGHEV 919


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 3   IDYDGREV 10
           IDY G EV
Sbjct: 912 IDYPGHEV 919


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 3   IDYDGREV 10
           IDY G EV
Sbjct: 904 IDYRGHEV 911


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 3   IDYDGREV 10
           IDY G EV
Sbjct: 904 IDYRGHEV 911


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 3   IDYDGREV 10
           IDY G EV
Sbjct: 904 IDYRGNEV 911


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 3   IDYDGREV 10
           IDY G EV
Sbjct: 903 IDYRGHEV 910


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 3   IDYDGREV 10
           IDY G EV
Sbjct: 902 IDYRGHEV 909


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 3   IDYDGREV 10
           IDY G EV
Sbjct: 904 IDYRGNEV 911


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 3   IDYDGREV 10
           IDY G EV
Sbjct: 903 IDYRGHEV 910


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 3   IDYDGREV 10
           IDY G EV
Sbjct: 904 IDYRGNEV 911


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 3   IDYDGREV 10
           IDY G E+
Sbjct: 903 IDYKGNEI 910


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 3   IDYDGREV 10
           IDY G E+
Sbjct: 903 IDYKGNEI 910


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 3   IDYDGREV 10
           IDY G E+
Sbjct: 903 IDYKGNEI 910


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1    AAIDYD 6
            +AIDYD
Sbjct: 3014 SAIDYD 3019


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1    AAIDYD 6
            +AIDYD
Sbjct: 3014 SAIDYD 3019


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 3    IDYDGRE 9
            ID DG+E
Sbjct: 1743 IDIDGKE 1749


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 2    AIDYDGREV 10
            ++  DGREV
Sbjct: 1556 SVTIDGREV 1564


>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV

Query: 2   AIDYD 6
           AIDYD
Sbjct: 188 AIDYD 192


>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate

Query: 2   AIDYD 6
           AIDYD
Sbjct: 188 AIDYD 192


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 3   IDYDGREV 10
           +DY G EV
Sbjct: 905 LDYRGHEV 912


>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3   IDYDGR 8
           +DYD R
Sbjct: 260 VDYDNR 265


>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3   IDYDGR 8
           +DYD R
Sbjct: 260 VDYDNR 265


>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3   IDYDGR 8
           +DYD R
Sbjct: 260 VDYDNR 265


>sp|UXP_ADE02|U exon protein|Human adenovirus C serotype 2

Query: 1   AAIDYDG 7
           AAID DG
Sbjct: 155 AAIDLDG 161


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 3   IDYDGREV 10
           +DY G EV
Sbjct: 906 LDYRGHEV 913


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 4    DYDGREV 10
            +YD RE+
Sbjct: 2267 EYDDREI 2273


>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 4   DYDGREV 10
           D DG+E+
Sbjct: 448 DIDGKEI 454




83|SequenceR|420|411|KQCKRAAIDY

>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1    KQCKRAAID 9
            KQC  AA+D
Sbjct: 2152 KQCCTAAVD 2160


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1    KQCKRAAID 9
            KQC  AA+D
Sbjct: 2152 KQCCTAAVD 2160


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 1    KQCKRAA 7
            K+CKRA 
Sbjct: 1488 KRCKRAG 1494


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 1    KQCKRAAIDY 10
            K CK + +DY
Sbjct: 1111 KCCKESRMDY 1120


>sp|A18_YMTV5|TRANSCRIPT termination protein A18|Yaba monkey tumor virus (strain

Query: 3   CKRAAIDY 10
           CK+  +DY
Sbjct: 191 CKKIHVDY 198




84|SequenceR|425|416|NKGLIKQCKR

>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1   NKGLIKQCKR 10
           +KGL +QC R
Sbjct: 713 SKGLYRQCIR 722


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1   NKGLIKQCKR 10
           +KGL +QC R
Sbjct: 713 SKGLYRQCIR 722


>sp|NSP3_ROTHW|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United

Query: 2   KGLIKQC 8
           KGL+KQC
Sbjct: 300 KGLLKQC 306


>sp|NSP3_ROTWI|NON-STRUCTURAL protein 3|Rotavirus A (isolate RVA/Human/United

Query: 2   KGLIKQC 8
           KGL+KQC
Sbjct: 300 KGLLKQC 306


>sp|NSP3_ROTHT|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United

Query: 2   KGLIKQC 8
           KGL+KQC
Sbjct: 300 KGLLKQC 306


>sp|NSP3_ROTHP|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United

Query: 2   KGLIKQC 8
           KGL+KQC
Sbjct: 297 KGLLKQC 303


>sp|NSP3_ROTHK|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])

Query: 2   KGLIKQC 8
           KGL+KQC
Sbjct: 300 KGLLKQC 306


>sp|NSP3_ROTAM|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United

Query: 2   KGLIKQC 8
           KGL+KQC
Sbjct: 297 KGLLKQC 303


>sp|NSP3_ROTAD|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United

Query: 2   KGLIKQC 8
           KGL+KQC
Sbjct: 297 KGLLKQC 303


>sp|VE6_HPV24|PROTEIN E6|Human papillomavirus 24

Query: 2   KGLIKQCKR 10
           KGL +QCK+
Sbjct: 131 KGLCRQCKQ 139


>sp|NSP3_ROTH7|NON-STRUCTURAL protein 3|Rotavirus A (isolate RVA/Human/United

Query: 2   KGLIKQC 8
           KGL++QC
Sbjct: 297 KGLMRQC 303


>sp|NSP3_ROT41|NON-STRUCTURAL protein 3|Rotavirus A (isolate

Query: 2   KGLIKQC 8
           KGL++QC
Sbjct: 300 KGLMRQC 306


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 2   KGLIKQCKR 10
           +GL++ CKR
Sbjct: 281 EGLLEWCKR 289


>sp|NSP3_ROTH3|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])

Query: 2   KGLIKQC 8
           KGL++QC
Sbjct: 300 KGLLQQC 306


>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)

Query: 1  NKGLIKQ 7
          NKGL+K+
Sbjct: 14 NKGLLKK 20


>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)

Query: 1  NKGLIKQ 7
          NKGL+K+
Sbjct: 14 NKGLLKK 20


>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)

Query: 1  NKGLIKQ 7
          NKGL+K+
Sbjct: 14 NKGLLKK 20


>sp|VE6_HPV05|PROTEIN E6|Human papillomavirus 5

Query: 2   KGLIKQCK 9
           KG+ +QCK
Sbjct: 144 KGICRQCK 151


>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain

Query: 1  NKGLIKQC 8
          N GL+++C
Sbjct: 12 NMGLLRKC 19


>sp|VE6_HPV47|PROTEIN E6|Human papillomavirus 47

Query: 2   KGLIKQCK 9
           KG+ +QCK
Sbjct: 143 KGVCRQCK 150


>sp|VE6_HPV12|PROTEIN E6|Human papillomavirus 12

Query: 2   KGLIKQCK 9
           KG+ +QCK
Sbjct: 142 KGICRQCK 149


>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3

Query: 4   LIKQCKR 10
           +I+QCK+
Sbjct: 842 VIRQCKQ 848


>sp|VE6_HPV5B|PROTEIN E6|Human papillomavirus type 5b

Query: 2   KGLIKQCKR 10
           KG+ +QCK 
Sbjct: 144 KGICRQCKH 152


>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3

Query: 3   GLIKQCKR 10
           GLI QC +
Sbjct: 214 GLIGQCPK 221


>sp|VE6_HPV36|PROTEIN E6|Human papillomavirus 36

Query: 2   KGLIKQCKR 10
           KG+ +QCK 
Sbjct: 144 KGICRQCKH 152


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1   NKGLIKQC 8
           +KGL ++C
Sbjct: 713 SKGLYRKC 720


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1   NKGLIKQC 8
           +KGL ++C
Sbjct: 713 SKGLYRKC 720


>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 3   GLIKQCKR 10
           GL++ CK+
Sbjct: 242 GLLQYCKQ 249




85|SequenceR|430|421|EWLAANKGLI

>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate

Query: 2   WLAANKG 8
           WLA N+G
Sbjct: 493 WLAENRG 499


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 2   WLAANKG 8
           WLA N+G
Sbjct: 494 WLAENRG 500


>sp|DNLI_VARV|DNA ligase|Variola virus

Query: 1   EWLAANK 7
           EWL  NK
Sbjct: 480 EWLVVNK 486


>sp|DNLI_VAR67|DNA ligase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   EWLAANK 7
           EWL  NK
Sbjct: 480 EWLVVNK 486


>sp|DNLI_VACCC|DNA ligase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   EWLAANK 7
           EWL  NK
Sbjct: 480 EWLVVNK 486


>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)

Query: 1   EWLAANK 7
           EWL  NK
Sbjct: 480 EWLVVNK 486


>sp|DNLI_MONPV|DNA ligase|Monkeypox virus (MPXV)

Query: 1   EWLAANK 7
           EWL  NK
Sbjct: 482 EWLVVNK 488


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 2   WLAANKG 8
           WL+ N+G
Sbjct: 493 WLSGNRG 499


>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 2    WLAANKGL 9
            W AAN+G+
Sbjct: 1356 WDAANRGV 1363


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 1    EWLAANKGLI 10
            +W A +KG+I
Sbjct: 992  DWEAEHKGII 1001


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 1    EWLAANKGLI 10
            +W A +KG+I
Sbjct: 992  DWEAEHKGII 1001


>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)

Query: 4   AANKGLI 10
           AAN+GLI
Sbjct: 920 AANQGLI 926


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 2   WLAANKG 8
           WL+ N+G
Sbjct: 493 WLSENRG 499


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 2   WLAANKG 8
           WL+ N+G
Sbjct: 493 WLSENRG 499


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 2   WLAANKG 8
           WL+ N+G
Sbjct: 493 WLSENRG 499


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 2   WLAANKG 8
           WL+ N+G
Sbjct: 493 WLSENRG 499


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 2   WLAANKG 8
           WL+ N+G
Sbjct: 493 WLSENRG 499


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 2   WLAANKG 8
           WL+ N+G
Sbjct: 493 WLSENRG 499


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 2   WLAANKG 8
           WL+ N+G
Sbjct: 493 WLSENRG 499


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired

Query: 2   WLAANKG 8
           WL+ N+G
Sbjct: 494 WLSENRG 500


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 2   WLAANKG 8
           WL+ N+G
Sbjct: 493 WLSENRG 499


>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2    WLAANKGL 9
            W+ A+KGL
Sbjct: 1143 WVPAHKGL 1150


>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2    WLAANKGL 9
            W+ A+KGL
Sbjct: 1144 WVPAHKGL 1151


>sp|US10_HHV2H|VIRION protein US10|Human herpesvirus 2 (strain HG52)

Query: 1   EWLAANK 7
           +WL AN+
Sbjct: 213 QWLRANR 219


>sp|US10_CHV1|VIRION protein US10 homolog|Cercopithecine herpesvirus 1 (CeHV-1) (Simian

Query: 1   EWLAANK 7
           +WL AN+
Sbjct: 126 QWLRANR 132


>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31

Query: 1  EWLAANKG 8
          +WL  N G
Sbjct: 33 QWLTTNNG 40


>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain

Query: 1   EWLAANKGLI 10
           EW   N G I
Sbjct: 94  EWFEKNAGTI 103


>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3   LAANKGL 9
           LAAN+G+
Sbjct: 313 LAANRGV 319


>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3   LAANKGL 9
           LAAN+G+
Sbjct: 313 LAANRGV 319


>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3   LAANKGL 9
           LAAN+G+
Sbjct: 313 LAANRGV 319


>sp|US10_HHV1F|VIRION protein US10|Human herpesvirus 1 (strain F)

Query: 1   EWLAANK 7
           +WL AN+
Sbjct: 220 QWLRANQ 226


>sp|US10_HHV11|VIRION protein US10|Human herpesvirus 1 (strain 17)

Query: 1   EWLAANK 7
           +WL AN+
Sbjct: 229 QWLRANQ 235


>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus

Query: 1   EWLAANK 7
           EW+ AN+
Sbjct: 537 EWIHANE 543


>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)

Query: 1   EWLAANK 7
           EW+ AN+
Sbjct: 537 EWIHANE 543


>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   EWLAANK 7
           EW+ AN+
Sbjct: 537 EWIHANE 543


>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)

Query: 1   EWLAANK 7
           EW+ AN+
Sbjct: 537 EWIHANE 543


>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)

Query: 1   EWLAANK 7
           EW+ AN+
Sbjct: 537 EWIHANE 543


>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)

Query: 2   WLAANKG 8
           W+ AN G
Sbjct: 447 WIRANSG 453


>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   WLAANKG 8
           W+ AN G
Sbjct: 447 WIRANSG 453


>sp|SHDAG_HDVAM|SMALL delta antigen|Hepatitis delta virus genotype I

Query: 2  WLAANKGLI 10
          WL   KG+I
Sbjct: 50 WLGNIKGII 58


>sp|LHDAG_HDVAM|LARGE delta antigen|Hepatitis delta virus genotype I

Query: 2  WLAANKGLI 10
          WL   KG+I
Sbjct: 50 WLGNIKGII 58


>sp|E434_ADE09|EARLY E4 34 kDa protein|Human adenovirus D serotype 9

Query: 2   WLAANKGLI 10
           W A N GL+
Sbjct: 198 WSALNYGLL 206


>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate

Query: 1   EWLAANKGLI 10
           EW   N G I
Sbjct: 94  EWFEKNAGTI 103


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1145 WVPAHKGI 1152


>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2    WLAANKGL 9
            W+ A++GL
Sbjct: 1145 WVPAHRGL 1152


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1145 WVPAHKGI 1152


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1145 WVPAHKGI 1152


>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1146 WVPAHKGI 1153


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1144 WVPAHKGI 1151


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1144 WVPAHKGI 1151


>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1144 WVPAHKGI 1151


>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1117 WVPAHKGI 1124


>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1146 WVPAHKGI 1153


>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1117 WVPAHKGI 1124


>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1115 WVPAHKGI 1122


>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1119 WVPAHKGI 1126


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1128 WVPAHKGI 1135


>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1119 WVPAHKGI 1126


>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1132 WVPAHKGI 1139


>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1123 WVPAHKGI 1130


>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1120 WVPAHKGI 1127


>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1117 WVPAHKGI 1124


>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1121 WVPAHKGI 1128


>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1122 WVPAHKGI 1129


>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1126 WVPAHKGI 1133


>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1134 WVPAHKGI 1141


>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1134 WVPAHKGI 1141


>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1117 WVPAHKGI 1124


>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1143 WVPAHKGI 1150


>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1134 WVPAHKGI 1141


>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1117 WVPAHKGI 1124


>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1122 WVPAHKGI 1129


>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1122 WVPAHKGI 1129


>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2    WLAANKGL 9
            W+ A+KG+
Sbjct: 1122 WVPAHKGI 1129




86|SequenceR|435|426|KYVEYEWLAA

>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P

Query: 1  KYVEYEWL 8
          +Y E EWL
Sbjct: 3  RYTESEWL 10


>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain

Query: 2   YVEYEWLA 9
           + EY+W A
Sbjct: 316 FSEYQWFA 323


>sp|CAPSP_ADE12|PENTON protein|Human adenovirus A serotype 12

Query: 3   VEYEW 7
           +EYEW
Sbjct: 151 LEYEW 155


>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 756 KYTSFPWL 763


>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 756 KYTSFPWL 763


>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 756 KYTSFPWL 763


>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 756 KYTSFPWL 763


>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 756 KYTSFPWL 763


>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 756 KYTSFPWL 763


>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 755 KYTSFPWL 762


>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 755 KYTSFPWL 762


>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 755 KYTSFPWL 762


>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 755 KYTSFPWL 762


>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 745 KYTSFPWL 752


>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 745 KYTSFPWL 752


>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 756 KYTSFPWL 763


>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 756 KYTSFPWL 763


>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 751 KYTSFPWL 758


>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 756 KYTSFPWL 763


>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 756 KYTSFPWL 763


>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 755 KYTSFPWL 762


>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 756 KYTSFPWL 763


>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 756 KYTSFPWL 763


>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 756 KYTSFPWL 763


>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 756 KYTSFPWL 763


>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 756 KYTSFPWL 763


>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 756 KYTSFPWL 763


>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 756 KYTSFPWL 763


>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 756 KYTSFPWL 763


>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 756 KYTSFPWL 763


>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 758 KYTSFPWL 765


>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 758 KYTSFPWL 765


>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 758 KYTSFPWL 765


>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 751 KYTSFPWL 758


>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 758 KYTSFPWL 765


>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 758 KYTSFPWL 765


>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 745 KYTSFPWL 752


>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 756 KYTSFPWL 763


>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 745 KYTSFPWL 752


>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 751 KYTSFPWL 758


>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 755 KYTSFPWL 762


>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 758 KYTSFPWL 765


>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 756 KYTSFPWL 763


>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 756 KYTSFPWL 763


>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 745 KYTSFPWL 752


>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 755 KYTSFPWL 762


>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 756 KYTSFPWL 763


>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 745 KYTSFPWL 752


>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2

Query: 1   KYVEYEWL 8
           KY  + WL
Sbjct: 756 KYTAFPWL 763


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 3    VEYEWL 8
            +EY WL
Sbjct: 1543 LEYSWL 1548


>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985

Query: 2   YVEYEWL 8
           Y E +WL
Sbjct: 155 YAEMKWL 161


>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985

Query: 2   YVEYEWL 8
           Y E +WL
Sbjct: 155 YAEMKWL 161


>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980

Query: 2   YVEYEWL 8
           Y E +WL
Sbjct: 155 YAEMKWL 161


>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New

Query: 2   YVEYEWL 8
           Y E +WL
Sbjct: 155 YAEMKWL 161


>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao

Query: 2   YVEYEWL 8
           Y E +WL
Sbjct: 155 YAEMKWL 161


>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973

Query: 2   YVEYEWL 8
           Y E +WL
Sbjct: 155 YAEMKWL 161


>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973

Query: 2   YVEYEWL 8
           Y E +WL
Sbjct: 155 YAEMKWL 161


>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972

Query: 2   YVEYEWL 8
           Y E +WL
Sbjct: 155 YAEMKWL 161


>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966

Query: 2   YVEYEWL 8
           Y E +WL
Sbjct: 155 YAEMKWL 161


>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964

Query: 2   YVEYEWL 8
           Y E +WL
Sbjct: 155 YAEMKWL 161


>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964

Query: 2   YVEYEWL 8
           Y E +WL
Sbjct: 155 YAEMKWL 161


>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963

Query: 2   YVEYEWL 8
           Y E +WL
Sbjct: 155 YAEMKWL 161


>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956

Query: 2   YVEYEWL 8
           Y E +WL
Sbjct: 155 YAEMKWL 161


>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge

Query: 2   YVEYEWL 8
           Y E +WL
Sbjct: 155 YAEMKWL 161


>sp|VPK2_VAR67|SERINE/THREONINE-PROTEIN kinase 2|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 4  EYEWLA 9
          EY+W++
Sbjct: 10 EYQWMS 15




87|SequenceR|440|431|GIEKFKYVEY

>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain

Query: 1  GIEKFKYVEY 10
          G+ +FK VE+
Sbjct: 70 GVYQFKSVEF 79


>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain

Query: 1  GIEKFKYVEY 10
          G+ +FK VE+
Sbjct: 70 GVYQFKSVEF 79




88|SequenceR|445|436|IAKLQGIEKF

>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate

Query: 4   LQGIEKF 10
           ++G+EKF
Sbjct: 752 IEGVEKF 758


>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)

Query: 4   LQGIEK 9
           +QGIEK
Sbjct: 230 MQGIEK 235


>sp|NCAP_INCCA|NUCLEOPROTEIN C virus (strain C/California/1978)

Query: 4   LQGIEK 9
           +QGIEK
Sbjct: 230 MQGIEK 235


>sp|NCAP_INCAA|NUCLEOPROTEIN C virus (strain C/Ann

Query: 4   LQGIEK 9
           +QGIEK
Sbjct: 230 MQGIEK 235




89|SequenceR|450|441|PLYPSIAKLQ

>sp|VME1_CVHN5|MEMBRANE protein|Human coronavirus HKU1 (isolate N5)

Query: 1   PLYPSIAKLQ 10
           P+Y ++AK+Q
Sbjct: 167 PVYVTVAKVQ 176


>sp|VME1_CVHN2|MEMBRANE protein|Human coronavirus HKU1 (isolate N2)

Query: 1   PLYPSIAKLQ 10
           P+Y ++AK+Q
Sbjct: 167 PVYVTVAKVQ 176


>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)

Query: 2   LYPSIAKLQ 10
           LYP + KLQ
Sbjct: 343 LYPEMEKLQ 351


>sp|VME1_CVHN1|MEMBRANE protein|Human coronavirus HKU1 (isolate N1)

Query: 1   PLYPSIAKLQ 10
           P+Y ++AK+Q
Sbjct: 167 PVYVTVAKVQ 176


>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3

Query: 1   PLYPSIAKLQ 10
           P YP+I K Q
Sbjct: 547 PTYPNITKEQ 556


>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)

Query: 2   LYPSIAKLQ 10
           L+PSIA + 
Sbjct: 195 LFPSIANMH 203


>sp|CEP2_HHV6Z|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6B (strain Z29)

Query: 2   LYPSIAKL 9
           ++PS+AK+
Sbjct: 199 IFPSLAKI 206


>sp|VU51_HHV7J|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 7 (strain JI)

Query: 2   LYPSIAKLQ 10
           L PS+ KLQ
Sbjct: 278 LMPSLRKLQ 286


>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P

Query: 1   PLYPSIAKL 9
           P+Y S+A++
Sbjct: 138 PVYESVAQM 146


>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   YPSIAKL 9
           +PS+AK+
Sbjct: 200 FPSLAKI 206




90|SequenceR|455|446|VPDGRPLYPS

>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 2   PDGRPLYP 9
           PDG+P  P
Sbjct: 462 PDGKPCTP 469


>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57

Query: 4   GRPLYP 9
           G PLYP
Sbjct: 592 GEPLYP 597


>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27

Query: 4   GRPLYP 9
           G PLYP
Sbjct: 592 GEPLYP 597


>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a

Query: 4   GRPLYP 9
           G PLYP
Sbjct: 592 GEPLYP 597


>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse

Query: 2   PDGRPLYPS 10
           PD RPL  S
Sbjct: 831 PDVRPLQES 839


>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)

Query: 1    VPDGRPLY 8
            V +GRPLY
Sbjct: 1013 VCEGRPLY 1020


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 3   DGRPLYPS 10
           +G P YPS
Sbjct: 940 EGNPYYPS 947


>sp|GM_HHV2H|ENVELOPE glycoprotein M|Human herpesvirus 2 (strain HG52)

Query: 1   VPDGRPLY 8
           VPD  P+Y
Sbjct: 438 VPDAEPIY 445


>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)

Query: 1    VPDGRPL 7
            VPDG PL
Sbjct: 1988 VPDGTPL 1994


>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2   PDGRPLY 8
           P GRP Y
Sbjct: 466 PAGRPNY 472


>sp|GAG_SFV3L|GAG polyprotein|Simian foamy virus type 3

Query: 2  PDGRPLYP 9
          P+GRP+ P
Sbjct: 67 PEGRPVNP 74


>sp|B4_HHV6Z|PROTEIN B4|Human herpesvirus 6B (strain Z29)

Query: 2   PDGRPLYP 9
           P GR L+P
Sbjct: 147 PRGRSLFP 154


>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)

Query: 2   PDGRPLY 8
           P GRP Y
Sbjct: 466 PAGRPNY 472


>sp|PG056_VACCC|PROTEIN OPG056|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   PDGRPLY 8
           P GRP Y
Sbjct: 466 PAGRPNY 472


>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)

Query: 2   PDGRPLY 8
           P GRP Y
Sbjct: 466 PAGRPNY 472


>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65

Query: 3   DGRPLY 8
           DG P+Y
Sbjct: 547 DGSPMY 552


>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4

Query: 3   DGRPLY 8
           DG P+Y
Sbjct: 548 DGSPMY 553


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 3    DGRPLY 8
            DG+P Y
Sbjct: 2477 DGQPFY 2482


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 3    DGRPLY 8
            DG+P Y
Sbjct: 2477 DGQPFY 2482


>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 1   VPDGRPLY 8
           +PDG P +
Sbjct: 270 LPDGPPCF 277


>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980

Query: 1   VPDGRPLY 8
           +PDG P +
Sbjct: 270 LPDGPPCF 277


>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978

Query: 1   VPDGRPLY 8
           +PDG P +
Sbjct: 270 LPDGPPCF 277


>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978

Query: 1   VPDGRPLY 8
           +PDG P +
Sbjct: 270 LPDGPPCF 277


>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977

Query: 1   VPDGRPLY 8
           +PDG P +
Sbjct: 270 LPDGPPCF 277


>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976

Query: 1   VPDGRPLY 8
           +PDG P +
Sbjct: 270 LPDGPPCF 277


>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975

Query: 1   VPDGRPLY 8
           +PDG P +
Sbjct: 270 LPDGPPCF 277


>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975

Query: 1   VPDGRPLY 8
           +PDG P +
Sbjct: 270 LPDGPPCF 277


>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port

Query: 1   VPDGRPLY 8
           +PDG P +
Sbjct: 270 LPDGPPCF 277


>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972

Query: 1   VPDGRPLY 8
           +PDG P +
Sbjct: 270 LPDGPPCF 277


>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972

Query: 1   VPDGRPLY 8
           +PDG P +
Sbjct: 270 LPDGPPCF 277


>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972

Query: 1   VPDGRPLY 8
           +PDG P +
Sbjct: 270 LPDGPPCF 277


>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970

Query: 1   VPDGRPLY 8
           +PDG P +
Sbjct: 270 LPDGPPCF 277


>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969

Query: 1   VPDGRPLY 8
           +PDG P +
Sbjct: 270 LPDGPPCF 277


>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971

Query: 1   VPDGRPLY 8
           +PDG P +
Sbjct: 270 LPDGPPCF 277


>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern

Query: 1   VPDGRPLY 8
           +PDG P +
Sbjct: 270 LPDGPPCF 277


>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 1   VPDGRPLY 8
           +PDG P +
Sbjct: 270 LPDGPPCF 277


>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967

Query: 1   VPDGRPLY 8
           +PDG P +
Sbjct: 270 LPDGPPCF 277


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 1    VPDGRP 6
            +PDG P
Sbjct: 2418 IPDGDP 2423


>sp|ORF27_HHV8P|PROTEIN ORF27|Human herpesvirus 8 type P

Query: 2   PDGRP 6
           PDGRP
Sbjct: 161 PDGRP 165


>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968

Query: 1   VPDGRPLY 8
           +PDG P +
Sbjct: 270 LPDGPPCF 277


>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996

Query: 1   VPDGRPLY 8
           +PDG P +
Sbjct: 270 LPDGPPCF 277


>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 1   VPDGRPLY 8
           +PDG P +
Sbjct: 270 LPDGPPCF 277


>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New

Query: 1   VPDGRPLY 8
           +PDG P +
Sbjct: 270 LPDGPPCF 277


>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985

Query: 1   VPDGRPLY 8
           +PDG P +
Sbjct: 270 LPDGPPCF 277


>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1   VPDGRPLY 8
           +PDG P +
Sbjct: 270 LPDGPPCF 277


>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky

Query: 1   VPDGRPLY 8
           +PDG P +
Sbjct: 270 LPDGPPCF 277


>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 3    DGRPL 7
            DGRPL
Sbjct: 1624 DGRPL 1628


>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)

Query: 3    DGRPL 7
            DGRPL
Sbjct: 1623 DGRPL 1627


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 3    DGRPL 7
            DGRPL
Sbjct: 1623 DGRPL 1627


>sp|VP1_POVBK|MAJOR capsid protein VP1|BK polyomavirus (BKPyV) (Human polyomavirus

Query: 3   DGRPLY 8
           DG+P+Y
Sbjct: 318 DGQPMY 323


>sp|VP1_POVBA|MAJOR capsid protein VP1|BK polyomavirus (strain AS) (BKPyV)

Query: 3   DGRPLY 8
           DG+P+Y
Sbjct: 318 DGQPMY 323


>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 2   PDGRPLY 8
           PD RP Y
Sbjct: 936 PDARPRY 942


>sp|VP1_POVJC|MAJOR capsid protein VP1|JC polyomavirus (JCPyV) (JCV)

Query: 3   DGRPLY 8
           DG+P+Y
Sbjct: 310 DGQPMY 315


>sp|CAHH_VACCC|CELL surface-binding protein OPG105|Vaccinia virus (strain Copenhagen)

Query: 3   DGRPLY 8
           DG+P Y
Sbjct: 209 DGKPYY 214


>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2

Query: 2   PDGRPLYPS 10
           PD  PL P+
Sbjct: 275 PDRHPLPPA 283




91|SequenceR|460|451|ILPKLVPDGR

>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 2  LPKLVPDG 9
          LPK+VPDG
Sbjct: 87 LPKVVPDG 94


>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)

Query: 2  LPKLVPDG 9
          LPK++PDG
Sbjct: 83 LPKVIPDG 90


>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn

Query: 2  LPKLVPDG 9
          LPK++PDG
Sbjct: 83 LPKVIPDG 90


>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate

Query: 2  LPKLVPDG 9
          LPK++PDG
Sbjct: 83 LPKVIPDG 90


>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate

Query: 2  LPKLVPDG 9
          LPK+ PDG
Sbjct: 83 LPKVTPDG 90


>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain

Query: 2   LPKLVPDGR 10
           LP LVP G+
Sbjct: 492 LPSLVPGGK 500


>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong

Query: 3   PKLVPD 8
           PKL+PD
Sbjct: 103 PKLLPD 108


>sp|PAX_I78A9|PROTEIN PA-X|Influenza A virus (strain A/Swine/Hong

Query: 3   PKLVPD 8
           PKL+PD
Sbjct: 103 PKLLPD 108


>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3   PKLVPD 8
           PK +PD
Sbjct: 103 PKFIPD 108


>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3   PKLVPD 8
           PK +PD
Sbjct: 103 PKFIPD 108


>sp|PAX_I02A6|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong

Query: 3   PKLVPD 8
           PK +PD
Sbjct: 103 PKFIPD 108


>sp|PAX_I02A5|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong

Query: 3   PKLVPD 8
           PK +PD
Sbjct: 103 PKFIPD 108


>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain

Query: 4   KLVPDG 9
           KL PDG
Sbjct: 145 KLTPDG 150


>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus

Query: 1   ILPKLVPDGR 10
           +LP  +PD +
Sbjct: 701 VLPYYLPDSK 710


>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate

Query: 1   ILPKLVPDGR 10
           +LP  +PD +
Sbjct: 701 VLPYYLPDSK 710


>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   ILPKLVPDGR 10
           +LP  +PD +
Sbjct: 701 VLPYYLPDSK 710


>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1   ILPKLVPDGR 10
           +LP  +PD +
Sbjct: 701 VLPYYLPDSK 710


>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)

Query: 1   ILPKLVPDGR 10
           +LP  +PD +
Sbjct: 701 VLPYYLPDSK 710


>sp|NCAP_VSIVC|NUCLEOPROTEIN stomatitis Indiana virus (strain

Query: 5   LVPDGR 10
           LVP+GR
Sbjct: 174 LVPEGR 179


>sp|NCAP_VSIVS|NUCLEOPROTEIN stomatitis Indiana virus (strain

Query: 5   LVPDGR 10
           LVP+GR
Sbjct: 174 LVPEGR 179


>sp|NCAP_VSIVN|NUCLEOPROTEIN stomatitis Indiana virus (strain

Query: 5   LVPDGR 10
           LVP+GR
Sbjct: 174 LVPEGR 179


>sp|NCAP_VSIVA|NUCLEOPROTEIN stomatitis Indiana virus (strain

Query: 5   LVPDGR 10
           LVP+GR
Sbjct: 174 LVPEGR 179


>sp|NCAP_VSIVG|NUCLEOPROTEIN stomatitis Indiana virus (strain

Query: 5   LVPDGR 10
           LVP+GR
Sbjct: 174 LVPEGR 179


>sp|VL2_HPV19|MINOR capsid protein L2|Human papillomavirus 19

Query: 1  ILPKLVPD 8
          I P LVPD
Sbjct: 86 IRPSLVPD 93


>sp|UL110_HCMVA|UNCHARACTERIZED protein UL110|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  ILPKLVPDGR 10
          I+   VPDGR
Sbjct: 56 IIFSFVPDGR 65


>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5

Query: 2   LPKLVP 7
           LPKL P
Sbjct: 412 LPKLTP 417


>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2

Query: 2   LPKLVP 7
           LPKL P
Sbjct: 412 LPKLTP 417


>sp|VL2_HPV25|MINOR capsid protein L2|Human papillomavirus 25

Query: 1  ILPKLVPD 8
          I P LVPD
Sbjct: 86 IRPSLVPD 93


>sp|TRX2_HHV7M|TRIPLEX capsid protein 2|Human herpesvirus 7 (strain MUK)

Query: 1   ILPKLVP 7
           ILP L+P
Sbjct: 126 ILPLLIP 132


>sp|TRX2_HHV7J|TRIPLEX capsid protein 2|Human herpesvirus 7 (strain JI)

Query: 1   ILPKLVP 7
           ILP L+P
Sbjct: 126 ILPLLIP 132




92|SequenceR|465|456|LIMEYILPKL

>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 4    EYILPK 9
            EY+LPK
Sbjct: 2273 EYLLPK 2278


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 4    EYILPK 9
            EY+LPK
Sbjct: 2277 EYLLPK 2282


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 4    EYILPK 9
            EY+LPK
Sbjct: 2273 EYMLPK 2278


>sp|US35_HCMVA|UNCHARACTERIZED protein HHLF2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3  MEYILPKL 10
          M YI PK+
Sbjct: 68 MRYIHPKM 75


>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United

Query: 1   LIMEYILPK 9
           L+M++  PK
Sbjct: 385 LVMKWFFPK 393


>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human

Query: 1   LIMEYILPK 9
            +  YILPK
Sbjct: 207 FLKHYILPK 215


>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human

Query: 1   LIMEYILPK 9
            +  YILPK
Sbjct: 207 FLKHYILPK 215


>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 2   IMEYILPKL 10
           +++Y++PK 
Sbjct: 807 VIDYVIPKF 815


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 3   MEYILPK 9
           +EY+LP+
Sbjct: 538 LEYLLPQ 544


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 3   MEYILPK 9
           +EY+LP+
Sbjct: 538 LEYLLPQ 544


>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United

Query: 2   IMEYILP 8
           I EY+LP
Sbjct: 114 ITEYLLP 120




93|SequenceR|470|461|ELFEHLIMEY

>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2    LFEHLIMEY 10
            L+E ++M+Y
Sbjct: 1160 LYEQVVMDY 1168


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2    LFEHLIMEY 10
            L+E ++M+Y
Sbjct: 1160 LYEQVVMDY 1168


>sp|UL91_HCMVM|PROTEIN UL91|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2  LFEHLIME 9
          +FEHL +E
Sbjct: 52 VFEHLTVE 59


>sp|UL91_HCMVA|PROTEIN UL91|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2  LFEHLIME 9
          +FEHL +E
Sbjct: 52 VFEHLTVE 59


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 2    LFEHLIM 8
            LF+HLI+
Sbjct: 2308 LFQHLIV 2314


>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2   LFEHL 6
           LFEHL
Sbjct: 215 LFEHL 219


>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2   LFEHL 6
           LFEHL
Sbjct: 215 LFEHL 219


>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2   LFEHL 6
           LFEHL
Sbjct: 215 LFEHL 219


>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   ELFEHL 6
           E+FEH+
Sbjct: 518 EIFEHM 523


>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   ELFEHL 6
           E+FEH+
Sbjct: 518 EIFEHM 523


>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   ELFEHL 6
           E+FEH+
Sbjct: 518 EIFEHM 523


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 5   HLIMEY 10
           H++M+Y
Sbjct: 710 HIVMQY 715


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 5   HLIMEY 10
           H++M+Y
Sbjct: 705 HIVMQY 710


>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 2   LFEHLIMEY 10
           +  H+++EY
Sbjct: 556 ILTHVVLEY 564


>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 2   LFEHLIME 9
            F+H +ME
Sbjct: 105 FFKHCVME 112


>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 2   LFEHLIME 9
            F+H +ME
Sbjct: 105 FFKHCVME 112


>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann

Query: 2   LFEHLIME 9
            F+H +ME
Sbjct: 105 FFKHCVME 112


>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 4   EHLIME 9
           EHLIM+
Sbjct: 196 EHLIMQ 201




94|SequenceR|475|466|GEYDSELFEH

>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 2    EYDSELFEH 10
            EY+SE F H
Sbjct: 1188 EYNSEFFFH 1196


>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)

Query: 1  GEYDSELFE 9
          G  D+E+FE
Sbjct: 69 GSTDTEMFE 77


>sp|ICP0_HHV11|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 1 (strain 17)

Query: 4  DSELFE 9
          D+ELFE
Sbjct: 66 DTELFE 71


>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United

Query: 3   YDSELFEH 10
           YD E+ EH
Sbjct: 447 YDDEITEH 454


>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)

Query: 3   YDSELF 8
           YD ELF
Sbjct: 307 YDDELF 312


>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)

Query: 3   YDSELF 8
           YD ELF
Sbjct: 307 YDDELF 312


>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)

Query: 3   YDSELF 8
           YD ELF
Sbjct: 307 YDDELF 312


>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)

Query: 3   YDSELF 8
           YD ELF
Sbjct: 307 YDDELF 312


>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)

Query: 3   YDSELF 8
           YD ELF
Sbjct: 307 YDDELF 312


>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)

Query: 3   YDSELF 8
           YD ELF
Sbjct: 307 YDDELF 312


>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)

Query: 3   YDSELF 8
           YD ELF
Sbjct: 307 YDDELF 312


>sp|PP85_HHV6Z|PHOSPHOPROTEIN 85|Human herpesvirus 6B (strain Z29)

Query: 4   DSELFEH 10
           D ELF H
Sbjct: 306 DKELFPH 312


>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 1   GEYDSELFEH 10
           G   SEL EH
Sbjct: 947 GSLRSELAEH 956




95|SequenceR|480|471|ILTAFGEYDS

>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)

Query: 2   LTAFGEY 8
           LTAF EY
Sbjct: 427 LTAFDEY 433


>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   LTAFGEY 8
           LTAF EY
Sbjct: 427 LTAFDEY 433


>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23

Query: 4   AFGEY 8
           AFGEY
Sbjct: 289 AFGEY 293


>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22

Query: 4   AFGEY 8
           AFGEY
Sbjct: 290 AFGEY 294


>sp|VPR_HV2NZ|PROTEIN Vpr|Human immunodeficiency virus type 2

Query: 1  ILTAFGEY 8
          +LTA G Y
Sbjct: 43 LLTALGRY 50


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 4    AFGEY 8
            AFGEY
Sbjct: 3070 AFGEY 3074


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 4    AFGEY 8
            AFGEY
Sbjct: 3070 AFGEY 3074


>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)

Query: 2   LTAFGEYD 9
           +T+FG+Y+
Sbjct: 845 VTSFGDYN 852


>sp|NSP1_ROTHU|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11])

Query: 5   FGEYDS 10
           FG YDS
Sbjct: 158 FGYYDS 163


>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 5   FGEYDS 10
           FG YDS
Sbjct: 158 FGYYDS 163


>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain

Query: 5   FGEYDS 10
           FG YDS
Sbjct: 158 FGYYDS 163


>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 5   FGEYDS 10
           FG YDS
Sbjct: 158 FGYYDS 163


>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)

Query: 4  AFGEYD 9
          AFG YD
Sbjct: 6  AFGGYD 11


>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)

Query: 4  AFGEYD 9
          AFG YD
Sbjct: 6  AFGGYD 11


>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain

Query: 2   LTAFGEY 8
           LT F EY
Sbjct: 313 LTVFSEY 319


>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)

Query: 4  AFGEYD 9
          AFG YD
Sbjct: 8  AFGGYD 13




96|SequenceR|485|476|GPWERILTAF

>sp|MATRX_HENDH|MATRIX protein|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 2   PWERILTA 9
           PW++ILT 
Sbjct: 140 PWKKILTG 147


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2   PWERILTA 9
           PW +ILTA
Sbjct: 964 PWIKILTA 971


>sp|MATRX_NIPAV|MATRIX protein|Nipah virus

Query: 2   PWERILTA 9
           PW+++LT+
Sbjct: 140 PWKKVLTS 147


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 1    GPWERI 6
            GPW+RI
Sbjct: 2819 GPWDRI 2824


>sp|MATRX_MEASA|MATRIX protein|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 2   PWERILT 8
           PW ++LT
Sbjct: 124 PWRKVLT 130


>sp|MATRX_MEASU|MATRIX protein|Measles virus (strain Hu2) (MeV)

Query: 2   PWERILT 8
           PW ++LT
Sbjct: 124 PWRKVLT 130


>sp|MATRX_MEASE|MATRIX protein|Measles virus (strain Edmonston) (MeV)

Query: 2   PWERILT 8
           PW ++LT
Sbjct: 124 PWRKVLT 130


>sp|MATRX_MEASC|MATRIX protein|Measles virus (strain Ichinose-B95a) (MeV)

Query: 2   PWERILT 8
           PW ++LT
Sbjct: 124 PWRKVLT 130


>sp|MATRX_MEASH|MATRIX protein|Measles virus (strain Halle) (MeV)

Query: 2   PWERILT 8
           PW ++LT
Sbjct: 124 PWRKVLT 130


>sp|MATRX_MEASI|MATRIX protein|Measles virus (strain IP-3-Ca) (MeV)

Query: 2   PWERILT 8
           PW ++LT
Sbjct: 124 PWRKVLT 130


>sp|E434_ADE12|EARLY E4 34 kDa protein|Human adenovirus A serotype 12

Query: 2  PWERILTAF 10
          PW+ ILT +
Sbjct: 70 PWDMILTDY 78


>sp|E434_ADE09|EARLY E4 34 kDa protein|Human adenovirus D serotype 9

Query: 2  PWERILT 8
          PW+ ILT
Sbjct: 70 PWDMILT 76


>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   WERILTA 9
           W R+LTA
Sbjct: 456 WARMLTA 462


>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)

Query: 3   WERILTA 9
           W R+LTA
Sbjct: 456 WARMLTA 462


>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 2   PWERILTA 9
           PW + LTA
Sbjct: 962 PWIKTLTA 969


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2   PWERILTA 9
           PW + LTA
Sbjct: 964 PWIKTLTA 971


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2   PWERILTA 9
           PW + LTA
Sbjct: 964 PWIKTLTA 971


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2   PWERILTA 9
           PW + LTA
Sbjct: 964 PWIKTLTA 971


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2   PWERILTA 9
           PW + LTA
Sbjct: 962 PWIKTLTA 969


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2   PWERILTA 9
           PW + LTA
Sbjct: 962 PWIKTLTA 969


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2   PWERILTA 9
           PW + LTA
Sbjct: 962 PWIKTLTA 969


>sp|REV_HV1SE|PROTEIN Rev|Human immunodeficiency virus type 1

Query: 4  ERILTAF 10
          ERILTA+
Sbjct: 57 ERILTAY 63


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 2   PWERILT 8
           PW ++LT
Sbjct: 963 PWIKVLT 969


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 2   PWERILT 8
           PW ++LT
Sbjct: 964 PWIKVLT 970


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 2   PWERILT 8
           PW ++LT
Sbjct: 964 PWIKVLT 970


>sp|E434_ADE02|EARLY 4 ORF6 protein|Human adenovirus C serotype 2

Query: 2  PWERILT 8
          PW+ +LT
Sbjct: 80 PWDMVLT 86


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 1   GPWERILTAF 10
           GP   ILT F
Sbjct: 530 GPLGEILTGF 539


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 1   GPWERILTAF 10
           GP   ILT F
Sbjct: 530 GPLGEILTGF 539


>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain

Query: 3   WERIL 7
           WER+L
Sbjct: 264 WERVL 268


>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate

Query: 3   WERIL 7
           WER+L
Sbjct: 264 WERVL 268


>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka

Query: 3   WERILTAF 10
           +ER +TAF
Sbjct: 823 FERFITAF 830


>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)

Query: 3   WERILTAF 10
           +ER +TAF
Sbjct: 823 FERFITAF 830


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 2    PWERI 6
            PW+RI
Sbjct: 2839 PWDRI 2843


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 2    PWERI 6
            PW+RI
Sbjct: 2838 PWDRI 2842


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 2    PWERI 6
            PW+RI
Sbjct: 2839 PWDRI 2843


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 2    PWERI 6
            PW+RI
Sbjct: 2838 PWDRI 2842


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 2    PWERI 6
            PW+RI
Sbjct: 2838 PWDRI 2842


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 2    PWERI 6
            PW+RI
Sbjct: 2838 PWDRI 2842


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 2    PWERI 6
            PW+RI
Sbjct: 2839 PWDRI 2843


>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra

Query: 1   GPWERILTAF 10
           G W+ I+T++
Sbjct: 208 GNWDCIMTSY 217


>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)

Query: 1   GPWERILTAF 10
           G W+ I+T++
Sbjct: 207 GNWDCIMTSY 216


>sp|IR12_HCMVA|UNCHARACTERIZED protein IRL12|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   WERILTA 9
           W RILT+
Sbjct: 248 WLRILTS 254


>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 5   RILTAF 10
           RILTAF
Sbjct: 607 RILTAF 612


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 3  WERILTA 9
          W+ ILT+
Sbjct: 76 WDHILTS 82


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 3  WERILTA 9
          W+ ILT+
Sbjct: 76 WDHILTS 82


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 3  WERILTA 9
          W+ ILT+
Sbjct: 76 WDHILTS 82


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 3  WERILTA 9
          W+ ILT+
Sbjct: 76 WDHILTS 82


>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   GPWERI 6
           G WER+
Sbjct: 404 GAWERL 409


>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   GPWERI 6
           G WER+
Sbjct: 404 GAWERL 409


>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)

Query: 3    WERILT 8
            WE I+T
Sbjct: 1586 WENIIT 1591


>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain

Query: 3    WERILT 8
            WE I+T
Sbjct: 1586 WENIIT 1591


>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)

Query: 3    WERILT 8
            WE I+T
Sbjct: 1586 WENIIT 1591


>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 3   WERILTAF 10
           W R+ TAF
Sbjct: 794 WLRLRTAF 801




97|SequenceR|490|481|NNYLDGPWER

>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 4    LDGPWER 10
            L GPW+R
Sbjct: 2817 LSGPWDR 2823


>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)

Query: 2   NYLDGPW 8
           +YLD PW
Sbjct: 578 SYLDLPW 584


>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)

Query: 2   NYLDGPW 8
           +YLD PW
Sbjct: 578 SYLDLPW 584


>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3   YLDGPWE 9
           ++ GPWE
Sbjct: 486 FVSGPWE 492


>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV

Query: 5   DGPWER 10
           +GPW R
Sbjct: 940 EGPWRR 945


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 5   DGPWE 9
           DGPW+
Sbjct: 416 DGPWQ 420


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 5   DGPWE 9
           DGPW+
Sbjct: 416 DGPWQ 420


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 5   DGPWE 9
           DGPW+
Sbjct: 416 DGPWQ 420


>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   NNYLDGPW 8
           N YL+ PW
Sbjct: 292 NIYLNFPW 299


>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)

Query: 1   NNYLDGPW 8
           N YL+ PW
Sbjct: 292 NIYLNFPW 299


>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   NNYLDGPW 8
           N YL+ PW
Sbjct: 292 NIYLNFPW 299


>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)

Query: 1   NNYLDGPW 8
           N YL+ PW
Sbjct: 292 NIYLNFPW 299


>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus

Query: 1   NNYLDGPW 8
           N YL+ PW
Sbjct: 292 NIYLNFPW 299


>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)

Query: 4   LDGPWER 10
           +D PW R
Sbjct: 920 IDAPWGR 926


>sp|PG085_MONPV|METALLOENDOPEPTIDASE OPG085|Monkeypox virus (MPXV)

Query: 1   NNYLDGPW 8
           N YL+ PW
Sbjct: 292 NIYLNFPW 299


>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)

Query: 2    NYLDGPW 8
            NY+  PW
Sbjct: 1291 NYIKWPW 1297


Query: 3   YLDGPWER 10
           Y D P+E+
Sbjct: 437 YCDSPFEK 444


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 3    YLDGPWER 10
            YL+ P ER
Sbjct: 6813 YLNSPMER 6820


>sp|NEF_HV1V9|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1   NNYLDGPWER 10
           +NY  GP ER
Sbjct: 126 HNYTPGPGER 135


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 4    LDGPWER 10
            ++GPW++
Sbjct: 1057 INGPWDQ 1063


>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)

Query: 3   YLDGPWE 9
           +L+G WE
Sbjct: 369 FLEGGWE 375


>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)

Query: 3   YLDGPWE 9
           +L+G WE
Sbjct: 371 FLEGGWE 377


>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)

Query: 3   YLDGPWE 9
           +L+G WE
Sbjct: 364 FLEGGWE 370


>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)

Query: 3   YLDGPWE 9
           +L+G WE
Sbjct: 369 FLEGGWE 375


>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)

Query: 3   YLDGPWE 9
           +L+G WE
Sbjct: 364 FLEGGWE 370


>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)

Query: 3   YLDGPWE 9
           +L+G WE
Sbjct: 369 FLEGGWE 375


>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)

Query: 3   YLDGPWE 9
           +L+G WE
Sbjct: 371 FLEGGWE 377


>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)

Query: 3   YLDGPWE 9
           +L+G WE
Sbjct: 360 FLEGGWE 366


>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong

Query: 3   YLDGPWE 9
           +L+G WE
Sbjct: 361 FLEGGWE 367


>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)

Query: 3   YLDGPWE 9
           +L+G WE
Sbjct: 361 FLEGGWE 367


>sp|MC132_MCV1|PROTEIN MC132|Molluscum contagiosum virus subtype 1

Query: 4   LDGPWER 10
           L GPW R
Sbjct: 167 LSGPWPR 173


>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)

Query: 3   YLDGPWE 9
           +L+G WE
Sbjct: 362 FLEGGWE 368


>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)

Query: 3   YLDGPWE 9
           +L+G WE
Sbjct: 370 FLEGGWE 376


>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus

Query: 6   GPWE 9
           GPWE
Sbjct: 281 GPWE 284


>sp|NEF_HV190|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1   NNYLDGPWER 10
            NY  GP ER
Sbjct: 126 QNYTPGPGER 135


>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)

Query: 1   NNYLDGPWER 10
           NNY    W R
Sbjct: 437 NNYNPSSWNR 446


>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)

Query: 3  YLDGP 7
          Y+DGP
Sbjct: 53 YIDGP 57


>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human

Query: 3  YLDGP 7
          Y+DGP
Sbjct: 53 YIDGP 57


>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human

Query: 6   GPWE 9
           GPWE
Sbjct: 281 GPWE 284


>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)

Query: 3  YLDGP 7
          Y+DGP
Sbjct: 53 YIDGP 57


>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5   DGPWER 10
           DG W+R
Sbjct: 228 DGAWKR 233


>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)

Query: 3  YLDGP 7
          Y+DGP
Sbjct: 53 YIDGP 57


>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)

Query: 3  YLDGP 7
          Y+DGP
Sbjct: 53 YIDGP 57


>sp|KITH_HHV2H|THYMIDINE kinase|Human herpesvirus 2 (strain HG52)

Query: 3  YLDGP 7
          Y+DGP
Sbjct: 53 YIDGP 57


>sp|KITH_HHV23|THYMIDINE kinase|Human herpesvirus 2 (strain 333)

Query: 3  YLDGP 7
          Y+DGP
Sbjct: 53 YIDGP 57


>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)

Query: 3  YLDGP 7
          Y+DGP
Sbjct: 53 YIDGP 57


>sp|E3B14_ADE05|EARLY E3B 14.6 kDa protein|Human adenovirus C serotype 5

Query: 3  YLDGPWER 10
          YLD  W+R
Sbjct: 74 YLDIGWKR 81


>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain

Query: 1   NNYLDG 6
           +NY+DG
Sbjct: 166 HNYIDG 171


>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)

Query: 1   NNYLDG 6
           +NY+DG
Sbjct: 166 HNYIDG 171


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 5   DGPWE 9
           +GPW+
Sbjct: 416 NGPWQ 420


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 5   DGPWE 9
           +GPW+
Sbjct: 416 NGPWQ 420


>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981

Query: 4   LDGPWER 10
           +DG W R
Sbjct: 100 IDGKWTR 106


>sp|PG085_YLDV|PROBABLE metalloendopeptidase G1-type|Yaba-like disease virus (YLDV)

Query: 1   NNYLDGPW 8
           N YL  PW
Sbjct: 294 NAYLCFPW 301


>sp|CEP2_HCMVM|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain Merlin)

Query: 3  YLDGPW 8
          Y DG W
Sbjct: 64 YRDGEW 69


>sp|CEP2_HCMVA|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain AD169)

Query: 3  YLDGPW 8
          Y DG W
Sbjct: 64 YRDGEW 69


>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain

Query: 4  LDGPWE 9
          LDGP++
Sbjct: 65 LDGPYQ 70


>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 4  LDGPWE 9
          LDGP++
Sbjct: 65 LDGPYQ 70


>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4  LDGPWE 9
          LDGP++
Sbjct: 65 LDGPYQ 70


>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United

Query: 4  LDGPWE 9
          LDGP++
Sbjct: 64 LDGPYQ 69


>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4  LDGPWE 9
          LDGP++
Sbjct: 65 LDGPYQ 70


>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4  LDGPWE 9
          LDGP++
Sbjct: 65 LDGPYQ 70


>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain

Query: 4  LDGPWE 9
          LDGP++
Sbjct: 65 LDGPYQ 70


>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain

Query: 4  LDGPWE 9
          LDGP++
Sbjct: 65 LDGPYQ 70


>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain

Query: 4  LDGPWE 9
          LDGP++
Sbjct: 65 LDGPYQ 70


>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4  LDGPWE 9
          LDGP++
Sbjct: 65 LDGPYQ 70


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 4    LDGPWE 9
            LDG W+
Sbjct: 1571 LDGKWD 1576


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 4    LDGPWE 9
            LDG W+
Sbjct: 1571 LDGKWD 1576


>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4  LDGPWE 9
          LDGP++
Sbjct: 65 LDGPYQ 70


>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41

Query: 3   YLDGPWER 10
           Y DG W +
Sbjct: 447 YSDGTWRK 454


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 4    LDGPW 8
            L GPW
Sbjct: 1050 LKGPW 1054




98|SequenceR|495|486|QVIVSNNYLD

>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV

Query: 2   VIVSNNYLD 10
           V+VS+N LD
Sbjct: 573 VVVSDNRLD 581


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 2    VIVSNNYLD 10
            VI+S NY D
Sbjct: 1087 VIISRNYED 1095


>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2   VIVSNNYLD 10
           +I+ NNY+D
Sbjct: 312 IILQNNYID 320


>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   VIVSNNYLD 10
           +I+ NNY+D
Sbjct: 312 IILQNNYID 320


>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)

Query: 2   VIVSNNYLD 10
           +I+ NNY+D
Sbjct: 312 IILQNNYID 320


>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3   IVSNNYLD 10
           I+S+NY D
Sbjct: 643 ILSSNYFD 650


>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3   IVSNNYLD 10
           I+S+NY D
Sbjct: 643 ILSSNYFD 650


>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3   IVSNNYLD 10
           I+S+NY D
Sbjct: 643 ILSSNYFD 650


>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14

Query: 1   QVIVSNNYLD 10
           Q    NNYLD
Sbjct: 318 QWAFDNNYLD 327


>sp|IR04_HCMVA|UNCHARACTERIZED protein IRL4|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   VIVSNNY 8
           +IV+NNY
Sbjct: 130 LIVNNNY 136


>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21

Query: 6   NNYLD 10
           NNYLD
Sbjct: 321 NNYLD 325


>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann

Query: 1   QVIVSNN 7
           QVIV NN
Sbjct: 395 QVIVDNN 401


>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957

Query: 1   QVIVSNN 7
           QVIV NN
Sbjct: 395 QVIVDNN 401


>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957

Query: 1   QVIVSNN 7
           QVIV NN
Sbjct: 395 QVIVDNN 401


>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957

Query: 1   QVIVSNN 7
           QVIV NN
Sbjct: 395 QVIVDNN 401


>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957

Query: 1   QVIVSNN 7
           QVIV NN
Sbjct: 395 QVIVDNN 401


>sp|US03_HCMVT|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 3  IVSNNYLD 10
          IVS +Y+D
Sbjct: 71 IVSQSYMD 78


>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25

Query: 1   QVIVSNNYLD 10
           Q    NNYLD
Sbjct: 317 QWAFDNNYLD 326


>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957

Query: 1   QVIVSNN 7
           QVIV NN
Sbjct: 395 QVIVDNN 401


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 1    QVIVSNNYL 9
            QVI+ N YL
Sbjct: 2041 QVILGNVYL 2049


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 2    VIVSNNYLD 10
            VI++ NY D
Sbjct: 1080 VIITRNYED 1088


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 2    VIVSNNYLD 10
            VI++ NY D
Sbjct: 1080 VIITRNYED 1088


>sp|US03_HCMVA|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3  IVSNNYLD 10
          IVS +Y+D
Sbjct: 71 IVSQSYMD 78


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 2    VIVSNNYLD 10
            VI++ NY D
Sbjct: 1082 VIITRNYED 1090


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 2    VIVSNNYLD 10
            VI++ NY D
Sbjct: 1082 VIITRNYED 1090


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 2    VIVSNNYLD 10
            VI++ NY D
Sbjct: 1079 VIITRNYED 1087


>sp|US03_HCMVM|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3  IVSNNYLD 10
          IVS +Y+D
Sbjct: 71 IVSQSYMD 78


>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)

Query: 1  QVIVSNNYLD 10
           ++ SNN++D
Sbjct: 47 SILFSNNFID 56


>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /

Query: 1  QVIVSNNYLD 10
           ++ SNN++D
Sbjct: 47 SILFSNNFID 56


>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain

Query: 1  QVIVSNNYLD 10
           ++ SNN++D
Sbjct: 47 SILFSNNFID 56


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 2    VIVSNNYLD 10
            VI++ NY D
Sbjct: 1079 VIITRNYDD 1087


>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   IVSNNYLD 10
           ++SN Y+D
Sbjct: 154 LLSNTYVD 161




99|SequenceR|500|491|HDRVAQVIVS

>sp|DUT_YMTV5|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Yaba monkey tumor virus (strain

Query: 2   DRVAQVI 8
           DR+AQ++
Sbjct: 107 DRIAQIV 113


>sp|DUT_VZVD|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain

Query: 2   DRVAQVIV 9
           DR+AQV++
Sbjct: 319 DRLAQVLL 326


>sp|DUT_VZVO|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain

Query: 2   DRVAQVIV 9
           DR+AQV++
Sbjct: 319 DRLAQVLL 326




100|SequenceR|505|496|SDKKLHDRVA

>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)

Query: 2   DKKLHDRV 9
           DK LH RV
Sbjct: 165 DKSLHSRV 172


>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)

Query: 2   DKKLHDRV 9
           DK LH RV
Sbjct: 165 DKSLHSRV 172


>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)

Query: 2   DKKLHDRV 9
           DK LH RV
Sbjct: 165 DKSLHSRV 172


>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)

Query: 2   DKKLHDRV 9
           DK LH RV
Sbjct: 165 DKSLHSRV 172


>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)

Query: 2   DKKLHDRV 9
           DK LH RV
Sbjct: 165 DKSLHSRV 172


>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)

Query: 2   DKKLHDRV 9
           DK LH RV
Sbjct: 165 DKSLHSRV 172


>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)

Query: 2   DKKLHDRV 9
           DK LH RV
Sbjct: 165 DKSLHSRV 172


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 1   SDKKLHDRVA 10
           SDK  HD++ 
Sbjct: 660 SDKTEHDKIG 669


>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2

Query: 1  SDKKLHDRVA 10
          +D  LH RVA
Sbjct: 31 ADADLHRRVA 40


>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)

Query: 2   DKKLHDRV 9
           DK LH R+
Sbjct: 165 DKSLHSRM 172


>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)

Query: 2   DKKLHDR 8
           DK LH R
Sbjct: 165 DKSLHSR 171




101|SequenceR|510|501|LTKNQSDKKL

>sp|V55A_HHV7J|UNCHARACTERIZED protein U55A|Human herpesvirus 7 (strain JI)

Query: 1   LTKNQSDKKL 10
           L KN +D+KL
Sbjct: 160 LLKNSNDQKL 169


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1   LTKNQSDKK 9
           + KNQSD+K
Sbjct: 649 IDKNQSDQK 657




102|SequenceR|515|506|ALTKLLTKNQ

>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV

Query: 4   KLLTKNQ 10
           KLLTKN+
Sbjct: 672 KLLTKNK 678




103|SequenceR|520|511|YTYLEALTKL

 ***** No hits found ******


104|SequenceR|525|516|GYNKDYTYLE

>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 1   GYNKDYTYL 9
           GY K YTY 
Sbjct: 774 GYPKQYTYF 782


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 2    YNKDYTYL 9
            YNKDY  L
Sbjct: 4804 YNKDYAEL 4811


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2    YNKDYTYLE 10
            +  DYT+LE
Sbjct: 1231 WQMDYTHLE 1239


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 2    YNKDYTYLE 10
            YNK+ TY E
Sbjct: 4487 YNKEKTYYE 4495


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 2    YNKDYTYLE 10
            YNK+ TY E
Sbjct: 4507 YNKEKTYYE 4515


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 2    YNKDYTYLE 10
            YNK+ TY E
Sbjct: 4537 YNKEKTYYE 4545


>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)

Query: 1   GYNKDYTYL 9
           GY K YT L
Sbjct: 329 GYGKAYTIL 337


>sp|US28_HCMVM|ENVELOPE protein US28|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5   DYTYLE 10
           DY YLE
Sbjct: 176 DYDYLE 181


>sp|US28_HCMVT|G-PROTEIN coupled receptor homolog US28|Human cytomegalovirus (strain Towne)

Query: 5   DYTYLE 10
           DY YLE
Sbjct: 176 DYDYLE 181


>sp|US28_HCMVA|G-PROTEIN coupled receptor homolog US28|Human cytomegalovirus (strain AD169)

Query: 5   DYTYLE 10
           DY YLE
Sbjct: 176 DYDYLE 181


>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1

Query: 1   GYNKDYTY 8
           GY K Y Y
Sbjct: 773 GYPKQYKY 780


>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin

Query: 2   YNKDYTY 8
           + KDY Y
Sbjct: 757 FEKDYQY 763


>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)

Query: 2   YNKDYTY 8
           + KDY Y
Sbjct: 757 FEKDYQY 763


>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)

Query: 2   YNKDYTY 8
           + KDY Y
Sbjct: 759 FEKDYQY 765


>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)

Query: 2   YNKDYTY 8
           + KDY Y
Sbjct: 756 FEKDYQY 762


>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P

Query: 4   KDYTYL 9
           KDY YL
Sbjct: 605 KDYAYL 610


>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)

Query: 2   YNKDYT 7
           YN+DY+
Sbjct: 150 YNQDYS 155


>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)

Query: 2   YNKDY 6
           YN+DY
Sbjct: 985 YNEDY 989


>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo

Query: 2   YNKDYTY 8
           + KDY Y
Sbjct: 751 FEKDYEY 757


>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)

Query: 2   YNKDYTY 8
           + KDY Y
Sbjct: 752 FEKDYEY 758


>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)

Query: 2   YNKDYTY 8
           + KDY Y
Sbjct: 751 FEKDYEY 757


>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean

Query: 2   YNKDYTY 8
           + KDY Y
Sbjct: 751 FEKDYEY 757


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3   NKDYTY 8
           NK+YT+
Sbjct: 595 NKEYTF 600


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3   NKDYTY 8
           NK+YT+
Sbjct: 595 NKEYTF 600


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3   NKDYTY 8
           NK+YT+
Sbjct: 595 NKEYTF 600


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3   NKDYTY 8
           NK+YT+
Sbjct: 595 NKEYTF 600


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3   NKDYTY 8
           NK+YT+
Sbjct: 589 NKEYTF 594


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3   NKDYTY 8
           NK+YT+
Sbjct: 595 NKEYTF 600


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3   NKDYTY 8
           NK+YT+
Sbjct: 595 NKEYTF 600


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3   NKDYTY 8
           NK+YT+
Sbjct: 595 NKEYTF 600


>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain

Query: 3  NKDYTY 8
          NKDY Y
Sbjct: 9  NKDYGY 14


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3   NKDYTY 8
           NK+YT+
Sbjct: 596 NKEYTF 601


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3   NKDYTY 8
           NK+YT+
Sbjct: 595 NKEYTF 600


>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)

Query: 4   KDYTYL 9
           KDYTY+
Sbjct: 561 KDYTYV 566




105|SequenceR|530|521|IELANGYNKD

>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4

Query: 1   IELANGYNKD 10
           IEL N Y +D
Sbjct: 189 IELVNSYIQD 198


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 1    IELANGYNKD 10
            +E  NG NK+
Sbjct: 1790 VESGNGLNKN 1799


>sp|MAT_INCJJ|POLYPROTEIN p42|Influenza C virus (strain C/JJ/1950)

Query: 1   IELANGY 7
           IEL NG+
Sbjct: 309 IELVNGF 315


>sp|MAT_INCAA|POLYPROTEIN p42|Influenza C virus (strain C/Ann

Query: 1   IELANGY 7
           IEL NG+
Sbjct: 309 IELVNGF 315


>sp|MAT_INCHY|POLYPROTEIN p42|Influenza C virus (strain C/Hyogo/1/1983)

Query: 1   IELANGY 7
           IEL NG+
Sbjct: 309 IELVNGF 315


>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65

Query: 1   IELANGYNKD 10
           IEL N Y +D
Sbjct: 189 IELVNTYIED 198


>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)

Query: 1   IELANGY 7
           IEL NG+
Sbjct: 309 IELVNGF 315


>sp|MAT_INCCA|POLYPROTEIN p42|Influenza C virus (strain C/California/1978)

Query: 1   IELANGY 7
           IEL NG+
Sbjct: 309 IELVNGF 315


>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54

Query: 1   IELANGYNKD 10
           +EL N Y +D
Sbjct: 184 LELVNSYIQD 193


>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1   IELANGYN 8
           IEL N Y+
Sbjct: 549 IELGNNYS 556




106|SequenceR|535|526|RLTLYIELAN

>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)

Query: 1   RLTLYIELA 9
           RLTL +EL 
Sbjct: 300 RLTLVLELG 308


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 1   RLTLYIELA 9
           RLTL +EL 
Sbjct: 300 RLTLVLELG 308




107|SequenceR|540|531|FVDKHRLTLY

>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1   FVDKHRLTL 9
           F+D H+LTL
Sbjct: 161 FLDLHKLTL 169


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1   FVDKHRLTL 9
           F+D H+LTL
Sbjct: 161 FLDLHKLTL 169


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 1   FVDKHRLTL 9
           F+D H+LTL
Sbjct: 156 FLDLHKLTL 164


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1   FVDKHRLTL 9
           F+D H+LTL
Sbjct: 161 FLDLHKLTL 169


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1   FVDKHRLTL 9
           F+D H+LTL
Sbjct: 161 FLDLHKLTL 169


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1   FVDKHRLTL 9
           F+D H+LTL
Sbjct: 161 FLDLHKLTL 169


>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)

Query: 1   FVDKHRLT 8
           FVD  RLT
Sbjct: 436 FVDSQRLT 443


>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 1   FVDKHRLTL 9
           F+D H++TL
Sbjct: 161 FLDLHKITL 169


>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   FVDKHRLTLY 10
           FV+KH  T+Y
Sbjct: 236 FVNKHLPTMY 245


>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 1   FVDKHRLTL 9
           F+D H++TL
Sbjct: 161 FLDLHKVTL 169


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 1   FVDKHRLTL 9
           F+D HR+ L
Sbjct: 156 FLDLHRVIL 164


>sp|VME1_CVH22|MEMBRANE protein|Human coronavirus 229E (HCoV-229E)

Query: 1   FVDKHRL 7
           +VD HRL
Sbjct: 149 YVDGHRL 155


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 2    VDKHRLT 8
            +D HR+T
Sbjct: 1235 IDDHRIT 1241


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 2    VDKHRLT 8
            +D HR+T
Sbjct: 1235 IDDHRIT 1241


>sp|VU3_HHV6Z|PROTEIN U3|Human herpesvirus 6B (strain Z29)

Query: 1   FVDKHRLTLY 10
           F D  R++LY
Sbjct: 276 FADAGRISLY 285


>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)

Query: 1   FVDKHRLTLY 10
           FV++H  T+Y
Sbjct: 236 FVNEHLPTMY 245


>sp|PB1F2_I85A3|PROTEIN PB1-F2|Influenza A virus (strain A/Chicken/Victoria/1/1985

Query: 3  DKHRLTLY 10
          D HR T+Y
Sbjct: 50 DMHRQTVY 57




108|SequenceR|545|536|KHILQFVDKH

>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)

Query: 1   KHILQFVDK 9
           +H+L+++DK
Sbjct: 308 QHVLKWIDK 316


>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)

Query: 1   KHILQFVDK 9
           +H+L+++DK
Sbjct: 308 QHVLKWIDK 316


>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34

Query: 1   KHILQFV 7
           KHI+QF+
Sbjct: 438 KHIVQFL 444


>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 3   ILQFVDKH 10
           IL+F+ KH
Sbjct: 834 ILEFLSKH 841


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 1    KHILQFVDKH 10
            KH+L  +DK+
Sbjct: 2537 KHLLNAMDKY 2546


>sp|CFLA_MCV1|VIRAL CASP8 and FADD-like apoptosis|Molluscum contagiosum virus subtype

Query: 1  KHILQFVDKH 10
          +H+L+ +D H
Sbjct: 14 RHLLEELDSH 23


>sp|U23_HHV6U|GLYCOPROTEIN U23|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   HILQFVDKH 10
            +L+F D H
Sbjct: 162 QVLEFTDTH 170


>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P

Query: 2   HILQF 6
           HILQF
Sbjct: 601 HILQF 605


>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain

Query: 3   ILQFVDKH 10
           I+Q V+KH
Sbjct: 394 IMQSVEKH 401


>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain

Query: 3   ILQFVDKH 10
           I+Q V+KH
Sbjct: 394 IMQSVEKH 401


>sp|YVAS_VACCC|UNCHARACTERIZED 7.5 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  KHILQFV 7
          KH+L+F+
Sbjct: 17 KHMLEFL 23


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 2    HILQFVD 8
            HI QF+D
Sbjct: 1036 HIKQFLD 1042


>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   KHILQFVDK 9
           KH+ QFV K
Sbjct: 245 KHVSQFVLK 253


>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   KHILQFVDK 9
           KH+ QFV K
Sbjct: 245 KHVSQFVLK 253




109|SequenceR|550|541|SFLNHKHILQ

>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34

Query: 5   HKHILQ 10
           HKH+LQ
Sbjct: 549 HKHLLQ 554


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 2    FLNHKHIL 9
            +LNH H L
Sbjct: 2012 YLNHSHHL 2019


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 2    FLNHKHIL 9
            +LNH H L
Sbjct: 2012 YLNHSHHL 2019


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 2    FLNHKHIL 9
            +LNH H L
Sbjct: 2011 YLNHSHHL 2018


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 2    FLNHKHIL 9
            +LNH H L
Sbjct: 2013 YLNHSHHL 2020


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 2    FLNHKHIL 9
            +LNH H L
Sbjct: 2015 YLNHSHHL 2022


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 2    FLNHKHIL 9
            +LNH H L
Sbjct: 2015 YLNHSHHL 2022


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 2    FLNHKHIL 9
            +LNH H L
Sbjct: 2020 YLNHSHHL 2027


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 2    FLNHKHIL 9
            +LNH H L
Sbjct: 2012 YLNHSHHL 2019


>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   FLNHKHI 8
           F+NHK I
Sbjct: 631 FVNHKDI 637


>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)

Query: 2   FLNHKHI 8
           FL+H HI
Sbjct: 777 FLHHLHI 783


>sp|M22_HRSVB|PROTEIN M2-2|Human respiratory syncytial virus B

Query: 4  NHKHILQ 10
          NHK+ILQ
Sbjct: 32 NHKNILQ 38


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 3    LNHKHI 8
            +NH+H+
Sbjct: 3138 INHQHV 3143


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 3    LNHKHI 8
            +NH+H+
Sbjct: 3138 INHQHV 3143


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 3    LNHKHI 8
            +NH+H+
Sbjct: 3138 INHQHV 3143


>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   FLNHK 6
           FLNHK
Sbjct: 320 FLNHK 324




110|SequenceR|555|546|KDKISSFLNH

>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)

Query: 2    DKISSFLNH 10
            DKI S+LNH
Sbjct: 1903 DKIVSYLNH 1911


>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain

Query: 2    DKISSFLNH 10
            DKI S+LNH
Sbjct: 1903 DKIVSYLNH 1911


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1    KDKISSFLNH 10
            KD+++  LNH
Sbjct: 1447 KDRLTQSLNH 1456


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1    KDKISSFLNH 10
            KD+++  LNH
Sbjct: 1447 KDRLTQSLNH 1456


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 1    KDKISSFLNH 10
            KD+++  LNH
Sbjct: 1451 KDRLTQSLNH 1460


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 1    KDKISSFLNH 10
            KD+++  LNH
Sbjct: 1451 KDRLTQSLNH 1460


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1    KDKISSFLNH 10
            KD+++  LNH
Sbjct: 1447 KDRLTQSLNH 1456


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1    KDKISSFLNH 10
            K+K+++FL H
Sbjct: 1269 KEKLNAFLVH 1278


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 1    KDKISSFLNH 10
            KD++   LNH
Sbjct: 1450 KDRVMQSLNH 1459


>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)

Query: 1   KDKISSFLNH 10
           KD++   LNH
Sbjct: 118 KDRVMQSLNH 127


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 1    KDKISSFLNH 10
            KD++   LNH
Sbjct: 1449 KDRVMQSLNH 1458


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 1    KDKISSFLNH 10
            KD++   LNH
Sbjct: 1450 KDRVMQSLNH 1459


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1    KDKISSFLNH 10
            KD++   LNH
Sbjct: 1444 KDRVMQSLNH 1453


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1    KDKISSFLNH 10
            KD++   LNH
Sbjct: 1444 KDRVMQSLNH 1453


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1    KDKISSFLNH 10
            K+K+++FL H
Sbjct: 1269 KEKLNAFLVH 1278


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1    KDKISSFLNH 10
            KD++   LNH
Sbjct: 1444 KDRVMQSLNH 1453


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1    KDKISSFLNH 10
            KD++   LNH
Sbjct: 1447 KDRLMQSLNH 1456


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 1    KDKISSFLNH 10
            KD++   LNH
Sbjct: 1451 KDRLLQSLNH 1460


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 1    KDKISSFLNH 10
            KD++   LNH
Sbjct: 1451 KDRLLQSLNH 1460


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 1    KDKISSFLNH 10
            KD++   LNH
Sbjct: 1451 KDRLLQSLNH 1460


>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   KDKISSFLNH 10
           KD++++ L+H
Sbjct: 143 KDELTTILSH 152


>sp|VC02_VACCT|KELCH repeat protein C2|Vaccinia virus (strain Tian Tan)

Query: 1   KDKISSFLNH 10
           KD++++ L+H
Sbjct: 143 KDELTTILSH 152


>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /

Query: 1   KDKISSFLNH 10
           KD++++ L+H
Sbjct: 143 KDELTTILSH 152




111|SequenceR|560|551|MLLVIKDKIS

>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1   MLLVIKDK 8
           MLL IKDK
Sbjct: 789 MLLEIKDK 796


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1   MLLVIKDK 8
           MLL IKDK
Sbjct: 789 MLLEIKDK 796


>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain

Query: 1   MLLVIKDKI 9
           M+L+I+D+I
Sbjct: 618 MILLIRDEI 626


>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate

Query: 4   VIKDKI 9
           V+KDKI
Sbjct: 332 VVKDKI 337


>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4   VIKDKI 9
           V+KDKI
Sbjct: 333 VVKDKI 338


>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)

Query: 4   VIKDKI 9
           V+KDKI
Sbjct: 333 VVKDKI 338


>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)

Query: 4   VIKDKI 9
           V+KDKI
Sbjct: 332 VVKDKI 337




112|SequenceR|565|556|ESDFDMLLVI

>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate

Query: 1   ESDFDMLL 8
           E DFDML 
Sbjct: 437 EPDFDMLF 444


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 3    DFDMLL 8
            DFDML+
Sbjct: 2732 DFDMLV 2737


>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)

Query: 2   SDFDML 7
           SD+DML
Sbjct: 560 SDYDML 565


>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)

Query: 1   ESDFDMLL 8
           +S+F+MLL
Sbjct: 442 DSEFEMLL 449


>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)

Query: 1   ESDFDMLL 8
           +S+F+MLL
Sbjct: 442 DSEFEMLL 449


>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)

Query: 1   ESDFDMLL 8
           +S+F+MLL
Sbjct: 441 DSEFEMLL 448


>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)

Query: 1   ESDFDMLL 8
           +S+F+MLL
Sbjct: 441 DSEFEMLL 448


>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)

Query: 1   ESDFDMLL 8
           +S+F+MLL
Sbjct: 441 DSEFEMLL 448


>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)

Query: 1   ESDFDMLL 8
           +S+F+MLL
Sbjct: 441 DSEFEMLL 448




113|SequenceR|570|561|MDVAKESDFD

>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain

Query: 1  MDVAKESDFD 10
          +D+A+  D+D
Sbjct: 69 LDIARSKDYD 78


>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4    AKESDFD 10
            AK++D+D
Sbjct: 995  AKQTDYD 1001


>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4   AKESDFD 10
           AK++D+D
Sbjct: 978 AKQTDYD 984


>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4    AKESDFD 10
            AK++D+D
Sbjct: 1055 AKQTDYD 1061


>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)

Query: 1   MDVAKESDFD 10
           +D+   SD D
Sbjct: 735 LDITSHSDID 744


>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   MDVAKESDFD 10
           +D+   SD D
Sbjct: 735 LDITSHSDID 744




114|SequenceR|575|566|ENDLLMDVAK

>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)

Query: 1   ENDLLMD 7
           END L+D
Sbjct: 208 ENDYLLD 214


>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   ENDLLMD 7
           END L+D
Sbjct: 208 ENDYLLD 214


>sp|VL2_HPV47|MINOR capsid protein L2|Human papillomavirus 47

Query: 2   NDLLMD 7
           NDLL+D
Sbjct: 420 NDLLLD 425


>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus

Query: 1   ENDLLMDV 8
           E DLLM V
Sbjct: 698 ETDLLMTV 705


>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV

Query: 1   ENDLLMDVA 9
           E+D+++D+A
Sbjct: 382 EDDMIVDMA 390




115|SequenceR|580|571|ISIKDENDLL

>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 4    KDENDLL 10
            KD ND+L
Sbjct: 2920 KDHNDML 2926


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 4    KDENDLL 10
            KD ND+L
Sbjct: 2920 KDHNDML 2926


>sp|PAP1_VARV|POLY(A) polymerase catalytic subunit|Variola virus

Query: 3   IKDEND 8
           IKDEND
Sbjct: 243 IKDEND 248


>sp|PAP1_VAR67|POLY(A) polymerase catalytic subunit|Variola virus (isolate

Query: 3   IKDEND 8
           IKDEND
Sbjct: 243 IKDEND 248


>sp|PAP1_HSPV|POLY(A) polymerase catalytic subunit|Horsepox virus (HSPV)

Query: 3   IKDEND 8
           IKDEND
Sbjct: 243 IKDEND 248


>sp|PAP1_VACCT|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Tian Tan)

Query: 3   IKDEND 8
           IKDEND
Sbjct: 243 IKDEND 248


>sp|PAP1_VACCA|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 3   IKDEND 8
           IKDEND
Sbjct: 243 IKDEND 248


>sp|PAP1_MONPV|POLY(A) polymerase catalytic subunit|Monkeypox virus (MPXV)

Query: 3   IKDEND 8
           IKDEND
Sbjct: 243 IKDEND 248


>sp|PAP1_CWPXG|POLY(A) polymerase catalytic subunit|Cowpox virus (strain GRI-90 /

Query: 3   IKDEND 8
           IKDEND
Sbjct: 243 IKDEND 248


>sp|PAP1_CWPXB|POLY(A) polymerase catalytic subunit|Cowpox virus (strain Brighton Red)

Query: 3   IKDEND 8
           IKDEND
Sbjct: 243 IKDEND 248


>sp|PAP1_VACCC|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Copenhagen)

Query: 3   IKDEND 8
           IKDEND
Sbjct: 243 IKDEND 248


>sp|NSP2_ROTHC|NON-STRUCTURAL protein 2|Rotavirus C (isolate RVC/Human/United

Query: 3   IKDENDLL 10
           IKD ND+L
Sbjct: 118 IKDVNDIL 125




116|SequenceR|585|576|EVVKKISIKD

>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United

Query: 2   VVKKISIKD 10
           +VK+++I+D
Sbjct: 829 IVKRMNIQD 837


>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)

Query: 4   KKISIK 9
           KKISIK
Sbjct: 885 KKISIK 890




117|SequenceR|590|581|RDELEEVVKK

>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1

Query: 1   RDELEEVV 8
           RDELEEV+
Sbjct: 136 RDELEEVL 143


>sp|GAG_SFV3L|GAG polyprotein|Simian foamy virus type 3

Query: 1   RDELEEVV 8
           RDELEE++
Sbjct: 134 RDELEEIL 141


>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 1   RDELEEVV 8
           RDELE+V+
Sbjct: 140 RDELEDVL 147


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 2   DELEEVV 8
           DELEEV+
Sbjct: 571 DELEEVI 577


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 2   DELEEVV 8
           DELEEV+
Sbjct: 571 DELEEVI 577


>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United

Query: 3  ELEEVVKK 10
          E+EE+VKK
Sbjct: 90 EIEEIVKK 97


>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus

Query: 1   RDELEEVVK 9
           RD+LEE +K
Sbjct: 228 RDKLEESLK 236


>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate

Query: 1   RDELEEVVK 9
           RD+LEE +K
Sbjct: 228 RDKLEESLK 236


>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   RDELEEVVK 9
           RD+LEE +K
Sbjct: 228 RDKLEESLK 236


>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)

Query: 1   RDELEEVVK 9
           RD+LEE +K
Sbjct: 228 RDKLEESLK 236


>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)

Query: 1   RDELEEVVK 9
           RD+LEE +K
Sbjct: 228 RDKLEESLK 236


>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)

Query: 1   RDELEEVVK 9
           RD+LEE +K
Sbjct: 228 RDKLEESLK 236


>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)

Query: 2 DELEEVVK 9
         DE++E+V+
Sbjct: 2 DEMDEIVR 9


>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2   DELEEVVKK 10
           + LE++VKK
Sbjct: 342 NTLEQIVKK 350


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 1    RDELEEVVKK 10
            RD+  E++KK
Sbjct: 2548 RDKARELLKK 2557


>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)

Query: 4   LEEVVKK 10
           +EE+VKK
Sbjct: 292 IEELVKK 298




118|SequenceR|595|586|HQLEPRDELE

>sp|NCAP_HRSVA|NUCLEOPROTEIN respiratory syncytial virus A

Query: 1   HQLEPRD 7
           HQL P+D
Sbjct: 380 HQLNPKD 386


>sp|NCAP_HRSV|NUCLEOPROTEIN respiratory syncytial virus

Query: 1   HQLEPRD 7
           HQL P+D
Sbjct: 380 HQLNPKD 386


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 3    LEPRDELE 10
             EPR +LE
Sbjct: 6690 FEPRSDLE 6697


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 3    LEPRDELE 10
             EPR +LE
Sbjct: 6710 FEPRSDLE 6717


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 3    LEPRDELE 10
             EPR +LE
Sbjct: 6740 FEPRSDLE 6747


>sp|NCAP_HRSV1|NUCLEOPROTEIN respiratory syncytial virus B

Query: 1   HQLEPRDE 8
           HQL P+++
Sbjct: 380 HQLNPKED 387


>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)

Query: 2   QLEPRDELE 10
           +L+P DE+E
Sbjct: 153 ELQPCDEIE 161


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 2   QLEPRDELE 10
           +LE RD +E
Sbjct: 651 ELEDRDRIE 659


>sp|PG038_VARV|EARLY protein OPG038|Variola virus

Query: 1   HQLEPRDE 8
           H L P+D+
Sbjct: 173 HYLHPKDK 180


>sp|PG038_VAR67|EARLY protein OPG038|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   HQLEPRDE 8
           H L P+D+
Sbjct: 173 HYLHPKDK 180


>sp|PG038_VACCC|EARLY protein OPG038|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   HQLEPRDE 8
           H L P+D+
Sbjct: 173 HYLHPKDK 180


>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51

Query: 2   QLEPRDELE 10
           ++ P DELE
Sbjct: 327 RIAPADELE 335




119|SequenceR|600|591|KHLYVHQLEP

>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1    KHLYVHQLE 9
            K +Y+HQLE
Sbjct: 3404 KFVYMHQLE 3412


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 1    KHLYVHQLE 9
            K +Y+HQLE
Sbjct: 3442 KFVYMHQLE 3450


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 1    KHLYVHQLE 9
            K +Y+HQLE
Sbjct: 3462 KFVYMHQLE 3470


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 1    KHLYVHQLE 9
            K +Y+HQLE
Sbjct: 3492 KFVYMHQLE 3500


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1    KHLYVHQLE 9
            K +Y+HQLE
Sbjct: 3404 KFVYMHQLE 3412


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1    KHLYVHQLE 9
            K +Y+HQLE
Sbjct: 3442 KFVYMHQLE 3450


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1    KHLYVHQLE 9
            K +Y+HQLE
Sbjct: 3462 KFVYMHQLE 3470


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1    KHLYVHQLE 9
            K +Y+HQLE
Sbjct: 3492 KFVYMHQLE 3500


>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)

Query: 3   LYVHQLEP 10
           LY+ QL+P
Sbjct: 782 LYIDQLKP 789


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 3    LYVHQLE 9
            LY+H+LE
Sbjct: 1574 LYLHELE 1580


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 3    LYVHQLE 9
            LY+H+LE
Sbjct: 1574 LYLHELE 1580


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 3    LYVHQLE 9
            LY+H+LE
Sbjct: 1574 LYLHELE 1580


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 3    LYVHQLE 9
            LY+H+LE
Sbjct: 1574 LYLHELE 1580


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 3    LYVHQLE 9
            LY+H+LE
Sbjct: 1574 LYLHELE 1580


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 3    LYVHQLE 9
            LY+H+LE
Sbjct: 1574 LYLHELE 1580


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 3    LYVHQLE 9
            LY+H+LE
Sbjct: 1574 LYLHELE 1580


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 3    LYVHQLE 9
            LY+H+LE
Sbjct: 1574 LYLHELE 1580


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 3    LYVHQLE 9
            LY+H+LE
Sbjct: 1574 LYLHELE 1580


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 5    VHQLEP 10
            VH+LEP
Sbjct: 2639 VHRLEP 2644


>sp|NSS_SFTSV|NON-STRUCTURAL protein NS-S|SFTS phlebovirus (isolate

Query: 5  VHQLEP 10
          +HQLEP
Sbjct: 70 LHQLEP 75


>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)

Query: 3   LYVHQLEP 10
           LY+ QL+P
Sbjct: 780 LYLDQLKP 787


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 3    LYVHQLE 9
            +Y+HQ+E
Sbjct: 3124 VYMHQIE 3130


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3    LYVHQLE 9
            +Y+HQ+E
Sbjct: 3124 VYMHQIE 3130


>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo

Query: 3   LYVHQLEP 10
           LY+ QL+P
Sbjct: 780 LYLDQLKP 787


>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean

Query: 3   LYVHQLEP 10
           LY+ QL+P
Sbjct: 782 LYLDQLKP 789


>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann

Query: 2   HLYVHQL 8
           H+Y H+L
Sbjct: 268 HIYSHEL 274


>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)

Query: 3   LYVHQLEP 10
           LY+ QL+P
Sbjct: 781 LYLDQLKP 788


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 5    VHQLEP 10
            +H+LEP
Sbjct: 2639 IHRLEP 2644


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 5    VHQLEP 10
            +H+LEP
Sbjct: 2638 IHRLEP 2643


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 5    VHQLEP 10
            +H+LEP
Sbjct: 2639 IHRLEP 2644


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 5    VHQLEP 10
            +H+LEP
Sbjct: 2638 IHRLEP 2643


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 5    VHQLEP 10
            +H+LEP
Sbjct: 2638 IHRLEP 2643


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 5    VHQLEP 10
            +H+LEP
Sbjct: 2638 IHRLEP 2643


>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean

Query: 3   LYVHQLEP 10
           LY+ QL+P
Sbjct: 780 LYLDQLKP 787


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 4    YVHQLE 9
            Y+HQ+E
Sbjct: 3411 YMHQME 3416


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 4    YVHQLE 9
            Y+HQ+E
Sbjct: 3411 YMHQME 3416


>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 3   LYVHQLEP 10
            YV++L+P
Sbjct: 313 FYVYKLQP 320


>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43

Query: 4   YVHQLEP 10
           Y+H ++P
Sbjct: 417 YIHTMDP 423


>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human

Query: 4   YVHQLEP 10
           Y+H ++P
Sbjct: 396 YIHTMDP 402


>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a

Query: 4   YVHQLEP 10
           Y+H ++P
Sbjct: 400 YIHNMDP 406


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 4    YVHQLE 9
            Y+HQ+E
Sbjct: 3100 YLHQIE 3105


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 4    YVHQLE 9
            Y+HQ+E
Sbjct: 3100 YLHQIE 3105


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 5    VHQLEP 10
            +H LEP
Sbjct: 2638 IHHLEP 2643


>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)

Query: 3   LYVHQLEP 10
           LY HQ+ P
Sbjct: 562 LYDHQIVP 569


>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)

Query: 3   LYVHQLEP 10
           LY HQ+ P
Sbjct: 564 LYDHQIVP 571


>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 3   LYVHQLEP 10
           LY HQ+ P
Sbjct: 557 LYDHQIVP 564


>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype

Query: 5  VHQLEP 10
          +HQ+EP
Sbjct: 60 LHQIEP 65


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 6  HQLEP 10
          HQ+EP
Sbjct: 61 HQIEP 65


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 6  HQLEP 10
          HQ+EP
Sbjct: 61 HQIEP 65


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 6  HQLEP 10
          HQ+EP
Sbjct: 61 HQIEP 65


>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41

Query: 4   YVHQLEP 10
           Y+H ++P
Sbjct: 421 YIHTMDP 427


>sp|GAAP_VACCL|GOLGI anti-apoptotic protein|Vaccinia virus (strain Lister) (VACV)

Query: 2   HLYVHQLEP 10
           H  +H+L P
Sbjct: 198 HSLIHKLSP 206


>sp|GAAP_VACC8|GOLGI anti-apoptotic protein|Vaccinia virus (strain LC16m8) (VACV)

Query: 2   HLYVHQLEP 10
           H  +H+L P
Sbjct: 198 HSLIHKLSP 206


>sp|GAAP_VACC0|GOLGI anti-apoptotic protein|Vaccinia virus (strain LC16m0) (VACV)

Query: 2   HLYVHQLEP 10
           H  +H+L P
Sbjct: 198 HSLIHKLSP 206


>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40

Query: 4   YVHQLEP 10
           Y+H ++P
Sbjct: 389 YIHAMDP 395


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 6  HQLEP 10
          HQ+EP
Sbjct: 61 HQIEP 65


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 6  HQLEP 10
          HQ+EP
Sbjct: 61 HQIEP 65


>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   KHLYVHQLEP 10
           + LYV  +EP
Sbjct: 189 RRLYVLAMEP 198


>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 2   HLYVHQLEP 10
           H Y H+L P
Sbjct: 394 HYYGHKLSP 402


>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   HLYVHQLEP 10
           H Y H+L P
Sbjct: 394 HYYGHKLSP 402


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 5    VHQLEP 10
            VH LEP
Sbjct: 2638 VHPLEP 2643


>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)

Query: 2   HLYVHQL 8
           H+Y H+L
Sbjct: 268 HIYNHEL 274


>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)

Query: 2   HLYVHQL 8
           H+Y H+L
Sbjct: 268 HIYNHEL 274


>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)

Query: 2   HLYVHQL 8
           H+Y H+L
Sbjct: 268 HIYNHEL 274


>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann

Query: 2   HLYVHQL 8
           H+Y H+L
Sbjct: 268 HIYNHEL 274


>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27

Query: 4   YVHQLEP 10
           Y+H ++P
Sbjct: 495 YIHNMDP 501


>sp|TAX_HTLV2|PROTEIN Tax-2|Human T-cell leukemia virus 2

Query: 3   LYVHQLEP 10
           LY++QL P
Sbjct: 154 LYLYQLSP 161


>sp|DNB2_ADE40|DNA-BINDING protein|Human adenovirus F serotype 40

Query: 4  YVHQLEP 10
          YV +LEP
Sbjct: 83 YVRRLEP 89


>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   LYVHQLEP 10
           +YV ++EP
Sbjct: 124 VYVEEIEP 131


>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   LYVHQLEP 10
           +YV ++EP
Sbjct: 124 VYVEEIEP 131


>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3

Query: 3   LYVHQLEP 10
           LY++QL P
Sbjct: 154 LYLYQLSP 161




120|SequenceR|605|596|DRKFLKHLYV

>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)

Query: 1   DRKFLKHLYV 10
           DR+F+ ++Y+
Sbjct: 351 DREFITYIYL 360


>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)

Query: 1   DRKFLKHLYV 10
           DR+F+ ++Y+
Sbjct: 348 DREFITYIYL 357


>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1   DRKFLKHLY 9
           D+KF+  LY
Sbjct: 403 DQKFITRLY 411


>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)

Query: 1   DRKFLKHLYV 10
           DR+F+ ++Y+
Sbjct: 345 DREFVDYIYL 354


>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   DRKFLKHLYV 10
           DR+F+ ++Y+
Sbjct: 345 DREFVDYIYL 354


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1    DRKFLKHL 8
            D+K LKH+
Sbjct: 2535 DKKALKHI 2542


>sp|IL18B_MONPV|INTERLEUKIN-18-BINDING protein|Monkeypox virus (MPXV)

Query: 1  DRKFLKHL 8
          D KF++HL
Sbjct: 64 DTKFIEHL 71


>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49

Query: 2   RKFLKHL 8
           R+FL+H+
Sbjct: 372 REFLRHV 378


>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15

Query: 2   RKFLKHL 8
           R+FL+H+
Sbjct: 372 REFLRHV 378


>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41

Query: 2   RKFLKHL 8
           RKF +HL
Sbjct: 580 RKFWRHL 586


>sp|NSP1B_ROTGA|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate

Query: 1   DRKFLKHLYV 10
           DRK   H++V
Sbjct: 110 DRKIEGHIFV 119


>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P

Query: 3  KFLKHLYV 10
          KFLKH  V
Sbjct: 39 KFLKHAKV 46


>sp|VE6_HPV19|PROTEIN E6|Human papillomavirus 19

Query: 3  KFLKHL 8
          KFL HL
Sbjct: 55 KFLSHL 60


>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 4   FLKHLYV 10
           FLK LY+
Sbjct: 644 FLKRLYI 650


>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain

Query: 4   FLKHLYV 10
           FLK LY+
Sbjct: 644 FLKRLYI 650


>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain

Query: 4   FLKHLYV 10
           FLK LY+
Sbjct: 644 FLKRLYI 650


>sp|PG087_VARV|LATE transcription elongation factor OPG087|Variola virus

Query: 1  DRKFLKHLY 9
          DRK+ K++Y
Sbjct: 46 DRKYHKYIY 54


>sp|PG087_VAR67|LATE transcription elongation factor OPG087|Variola virus (isolate

Query: 1  DRKFLKHLY 9
          DRK+ K++Y
Sbjct: 46 DRKYHKYIY 54


>sp|VE4_HPV1|PROTEIN E4|Human papillomavirus type 1 (Human

Query: 1  DRKFLKHLY 9
          D+   KHLY
Sbjct: 50 DKDSRKHLY 58


>sp|TRX1_HHV6Z|TRIPLEX capsid protein 1|Human herpesvirus 6B (strain Z29)

Query: 1  DRKFLKHL 8
          +RKFLK  
Sbjct: 38 ERKFLKQF 45


>sp|TRX1_HHV6H|TRIPLEX capsid protein 1|Human herpesvirus 6B (HHV-6 variant

Query: 1  DRKFLKHL 8
          +RKFLK  
Sbjct: 38 ERKFLKQF 45


>sp|TRX1_HHV6U|TRIPLEX capsid protein 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 1  DRKFLKHL 8
          +RKFLK  
Sbjct: 38 ERKFLKQF 45




121|SequenceR|610|601|QGKHHDRKFL

>sp|ETF1_VACCT|EARLY transcription factor 70 kDa|Vaccinia virus (strain Tian Tan)

Query: 3   KHHDRKFL 10
           ++H RKFL
Sbjct: 234 RYHGRKFL 241


>sp|ETF1_VACCC|EARLY transcription factor 70 kDa|Vaccinia virus (strain Copenhagen)

Query: 3   KHHDRKFL 10
           ++H RKFL
Sbjct: 234 RYHGRKFL 241


>sp|ETF1_VACCA|EARLY transcription factor 70 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 3   KHHDRKFL 10
           ++H RKFL
Sbjct: 234 RYHGRKFL 241


>sp|ETF1_MONPV|EARLY transcription factor 70 kDa|Monkeypox virus (MPXV)

Query: 3   KHHDRKFL 10
           ++H RKFL
Sbjct: 234 RYHGRKFL 241


>sp|ETF1_VAR67|EARLY transcription factor 70 kDa|Variola virus (isolate

Query: 3   KHHDRKFL 10
           ++H RKFL
Sbjct: 234 RYHGRKFL 241


>sp|ETF1_VARV|EARLY transcription factor 70 kDa|Variola virus

Query: 3   KHHDRKFL 10
           ++H RKFL
Sbjct: 234 RYHGRKFL 241


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 3   KHHDRKF 9
           KHHD  F
Sbjct: 596 KHHDATF 602


>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 3   KHHDRKFL 10
           + HD+KF+
Sbjct: 400 REHDQKFI 407


>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4   HHDRKF 9
           HHDR++
Sbjct: 820 HHDREW 825


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 3    KHHDRKF 9
            ++HDRK+
Sbjct: 2059 QYHDRKW 2065


>sp|MCE_VAR67|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Variola virus (isolate

Query: 2   GKHHD 6
           G+HHD
Sbjct: 96  GRHHD 100


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 3    KHHDRKF 9
            ++HDRK+
Sbjct: 2046 EYHDRKW 2052


>sp|MCE_VACCA|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain

Query: 2   GKHHD 6
           G+HHD
Sbjct: 96  GRHHD 100


>sp|MCE_VACCC|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain

Query: 2   GKHHD 6
           G+HHD
Sbjct: 96  GRHHD 100


>sp|MCE_MONPV|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Monkeypox virus (MPXV)

Query: 2   GKHHD 6
           G+HHD
Sbjct: 96  GRHHD 100


>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E

Query: 1   QGKHHDR 7
            GKHH R
Sbjct: 354 HGKHHIR 360


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 4    HHDRKF 9
            +HDRK+
Sbjct: 2059 YHDRKW 2064


>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E

Query: 1   QGKHHDR 7
            GKHH R
Sbjct: 354 HGKHHIR 360


>sp|ETF1_YMTV5|EARLY transcription factor 70 kDa|Yaba monkey tumor virus (strain

Query: 3   KHHDRKFL 10
           ++H +KFL
Sbjct: 234 QYHGKKFL 241


>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   QGKHHDRK 8
           +G+H +RK
Sbjct: 384 RGEHEERK 391




122|SequenceR|615|606|KEHYRQGKHH

>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 1    KEHYRQGKHH 10
            + + RQGK H
Sbjct: 2201 QSYVRQGKQH 2210


>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate

Query: 1   KEHYRQG 7
           KE+Y+QG
Sbjct: 111 KEYYQQG 117


>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United

Query: 3   HYRQG 7
           HYRQG
Sbjct: 434 HYRQG 438


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1    KEHYRQGKHH 10
            + + RQGK H
Sbjct: 2201 QSYVRQGKQH 2210


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1    KEHYRQGKHH 10
            + + RQGK H
Sbjct: 2201 QSYVRQGKQH 2210


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1    KEHYRQGKHH 10
            + + RQGK H
Sbjct: 2201 QSYVRQGKQH 2210


>sp|IR09_HCMVA|UNCHARACTERIZED protein IRL9|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   KEHYRQG 7
           KE+YRQG
Sbjct: 100 KENYRQG 106


>sp|VL2_HPV6B|MINOR capsid protein L2|Human papillomavirus type 6b

Query: 3   HYRQGKH 9
           H R GKH
Sbjct: 306 HTRSGKH 312


>sp|VL2_HPV6A|MINOR capsid protein L2|Human papillomavirus type 6a

Query: 3   HYRQGKH 9
           H R GKH
Sbjct: 306 HTRSGKH 312


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 2    EHYRQGKH 9
            EH++ G H
Sbjct: 2159 EHFKHGDH 2166


>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13

Query: 2   EHYRQGKH 9
           EH+ QGK 
Sbjct: 164 EHWGQGKQ 171


>sp|CORE5_ADE12|CORE-CAPSID bridging protein|Human adenovirus A serotype 12

Query: 1   KEHYRQ 6
           K HYRQ
Sbjct: 266 KRHYRQ 271


>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate

Query: 2    EHYRQGKHH 10
            EHY QG   
Sbjct: 1472 EHYLQGSEQ 1480


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 2    EHYRQG 7
            EH++QG
Sbjct: 2261 EHFKQG 2266


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 2    EHYRQGKH 9
            EH++ G H
Sbjct: 2185 EHFKPGDH 2192


>sp|D3_VARV|CORE protein D3|Variola virus

Query: 1   KEHYRQGKH 9
           + HYR  KH
Sbjct: 177 RSHYRVSKH 185


>sp|D3_VAR67|CORE protein D3|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   KEHYRQGKH 9
           + HYR  KH
Sbjct: 177 RSHYRVSKH 185


>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human

Query: 2   EHYRQGKH 9
           EHYR+  H
Sbjct: 254 EHYRKNYH 261


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 2    EHYRQG 7
            EH++QG
Sbjct: 2263 EHFKQG 2268


>sp|PG115_MONPV|CORE protein OPG115|Monkeypox virus (MPXV)

Query: 1   KEHYRQGKH 9
           + HYR  KH
Sbjct: 173 RSHYRVSKH 181


>sp|PG115_VACCA|CORE protein OPG115|Vaccinia virus (strain Ankara) (VACV)

Query: 1   KEHYRQGKH 9
           + HYR  KH
Sbjct: 173 RSHYRVSKH 181


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 2   EHYRQG 7
           EH++QG
Sbjct: 462 EHFQQG 467


>sp|PG115_VACCC|CORE protein OPG115|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   KEHYRQGKH 9
           + HYR  KH
Sbjct: 177 RSHYRVSKH 185


>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus

Query: 2   EHYRQGKH 9
           EHYR+  H
Sbjct: 254 EHYRKHYH 261


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1    KEHYRQGKH 9
            K +YR G H
Sbjct: 1028 KHNYRPGYH 1036


>sp|PG115_VACCT|CORE protein OPG115|Vaccinia virus (strain Tian Tan)

Query: 1   KEHYRQGKH 9
           + HYR  KH
Sbjct: 177 RSHYRVSKH 185


>sp|UL25_HHV6G|VIRION-PACKAGING protein UL25 homolog|Human herpesvirus 6A (strain GS)

Query: 5   RQGKHH 10
           R+GKH+
Sbjct: 284 RKGKHY 289


>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)

Query: 5   RQGKHH 10
           R+GKH+
Sbjct: 284 RKGKHY 289


>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 5   RQGKHH 10
           R+GKH+
Sbjct: 284 RKGKHY 289


>sp|REV_HV2KR|PROTEIN Rev|Human immunodeficiency virus type 2

Query: 1  KEHYRQ 6
          K+H+RQ
Sbjct: 44 KQHWRQ 49


>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)

Query: 4   YRQGKH 9
           YR+G H
Sbjct: 298 YREGSH 303


>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)

Query: 4   YRQGKH 9
           YR+G H
Sbjct: 298 YREGSH 303


>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15

Query: 3   HYRQGK 8
           HYR+G+
Sbjct: 364 HYRRGE 369


>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3

Query: 3   HYRQGKHH 10
           HY Q +H+
Sbjct: 142 HYFQARHY 149


>sp|TRX2_HCMVM|TRIPLEX capsid protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2  EHYRQGKHH 10
          +HY+ G H 
Sbjct: 42 KHYQLGLHQ 50


>sp|TRX2_HCMVA|TRIPLEX capsid protein 2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2  EHYRQGKHH 10
          +HY+ G H 
Sbjct: 42 KHYQLGLHQ 50


>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1

Query: 3   HYRQGKHH 10
           HY Q +H+
Sbjct: 140 HYFQARHY 147




123|SequenceR|620|611|YLSIQKEHYR

>sp|A47_VARV|PROTEIN A47|Variola virus

Query: 1  YLSIQKEHYR 10
          +LS+++EH +
Sbjct: 46 FLSLRREHVK 55


>sp|A47_VAR67|PROTEIN A47|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1  YLSIQKEHYR 10
          +LS+++EH +
Sbjct: 46 FLSLRREHVK 55


>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4

Query: 4   IQKEH 8
           IQKEH
Sbjct: 270 IQKEH 274


>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 1   YLSIQKEH 8
           Y+S++++H
Sbjct: 394 YMSLKQDH 401


>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)

Query: 1   YLSIQKEH 8
           Y+S++++H
Sbjct: 394 YMSLKQDH 401


>sp|PG045_VACCT|APOPTOSIS regulator OPG045|Vaccinia virus (strain Tian Tan)

Query: 1  YLSIQKEH 8
          YLS +++H
Sbjct: 58 YLSTERDH 65




124|SequenceR|625|616|RDYEAYLSIQ

>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)

Query: 1   RDYEAYLSIQ 10
           RD+EAY+  Q
Sbjct: 917 RDFEAYVPRQ 926


>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)

Query: 1   RDYEAYLSIQ 10
           RD+EAY+  Q
Sbjct: 914 RDFEAYVPRQ 923


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 1   RDYEAY 6
           +DYE Y
Sbjct: 882 KDYETY 887


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 1   RDYEAY 6
           +DYE Y
Sbjct: 882 KDYETY 887


>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United

Query: 1   RDYEAYL 7
           RD+E Y+
Sbjct: 174 RDFETYV 180




125|SequenceR|630|621|PLLNPRDYEA

>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 2   LLNPRDYE 9
           LLN +DYE
Sbjct: 868 LLNKQDYE 875


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra

Query: 2   LLNPRDYE 9
           LLN +DYE
Sbjct: 865 LLNKQDYE 872


>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 1   PLLNPRDYE 9
           P L+P DYE
Sbjct: 614 PHLSPDDYE 622


>sp|PG027_VACCC|INTERFERON antagonist OPG027|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   PLLNPRDYEA 10
           PL+  RDYE+
Sbjct: 139 PLIPYRDYES 148


>sp|PG027_VACCA|INTERFERON antagonist OPG027|Vaccinia virus (strain Ankara) (VACV)

Query: 1   PLLNPRDYEA 10
           PL+  RDYE+
Sbjct: 139 PLIPYRDYES 148


>sp|PG027_VARV|INTERFERON antagonist OPG027|Variola virus

Query: 1   PLLNPRDYEA 10
           PL+  RDYE+
Sbjct: 139 PLIPYRDYES 148


>sp|PG027_VAR67|INTERFERON antagonist OPG027|Variola virus (isolate Human/India/Ind3/1967)

Query: 1   PLLNPRDYEA 10
           PL+  RDYE+
Sbjct: 139 PLIPYRDYES 148


>sp|PG027_MONPV|INTERFERON antagonist OPG027|Monkeypox virus (MPXV)

Query: 1   PLLNPRDYEA 10
           PL+  RDYE+
Sbjct: 139 PLIPYRDYES 148


>sp|PG027_MONPZ|INTERFERON antagonist OPG027|Monkeypox virus (strain Zaire-96-I-16) (MPXV)

Query: 1   PLLNPRDYEA 10
           PL+  RDYE+
Sbjct: 139 PLIPYRDYES 148


>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 2   LLNPRDY 8
           L+N RDY
Sbjct: 513 LINERDY 519


>sp|VP2_POVJC|MINOR capsid protein VP2|JC polyomavirus (JCPyV) (JCV)

Query: 2   LLNPRDY 8
           L NP DY
Sbjct: 124 LFNPEDY 130


>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka

Query: 3   LNPRDY 8
           LNP DY
Sbjct: 711 LNPSDY 716


>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)

Query: 3   LNPRDY 8
           LNP DY
Sbjct: 711 LNPSDY 716


>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate

Query: 3   LNPRDYE 9
           +NP D+E
Sbjct: 107 VNPNDFE 113


>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain

Query: 3    LNPRDYEA 10
            LNP DY A
Sbjct: 1713 LNPCDYVA 1720


>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United

Query: 4   NPRDYE 9
           NP DYE
Sbjct: 262 NPIDYE 267


>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)

Query: 4    NPRDY 8
            NPRD+
Sbjct: 1364 NPRDF 1368


>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)

Query: 4    NPRDY 8
            NPRD+
Sbjct: 1394 NPRDF 1398




126|SequenceR|635|626|SDRLFPLLNP

>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)

Query: 2   DRLFPLLN 9
           D+LFPLL+
Sbjct: 193 DKLFPLLS 200


>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])

Query: 2   DRLFPLL 8
           D+LFPLL
Sbjct: 193 DKLFPLL 199


>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1   SDRLFPLL 8
           SD+ FP+L
Sbjct: 110 SDKTFPIL 117


>sp|YVFC_VACCC|UNCHARACTERIZED 11.6 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4  LFPLLNP 10
          ++PLL+P
Sbjct: 1  MYPLLSP 7


>sp|CEP1_HHV6Z|CYTOPLASMIC envelopment protein 1|Human herpesvirus 6B (strain Z29)

Query: 4   LFPLLNP 10
           LFP+L+P
Sbjct: 144 LFPVLSP 150


>sp|NSP2_ROTHD|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United

Query: 3   RLFPLLNP 10
           +L P+L+P
Sbjct: 175 KLMPILDP 182


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 2   DRLFPLL 8
           D+LFP++
Sbjct: 274 DKLFPIM 280


>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 3    RLFPLLN 9
            RLFPLL 
Sbjct: 1102 RLFPLLQ 1108


>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1   SDRLFPLL 8
           SD+ FP++
Sbjct: 110 SDKTFPIM 117


>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1   SDRLFPLL 8
           SD+ FP++
Sbjct: 110 SDKTFPIM 117


>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 1   SDRLFPLL 8
           SD+ FP++
Sbjct: 124 SDKTFPIM 131


>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 1   SDRLFPLL 8
           SD+ FP++
Sbjct: 124 SDKTFPIM 131


>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 1   SDRLFPLL 8
           SD+ FP++
Sbjct: 123 SDKTFPIM 130


>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 1   SDRLFPLL 8
           SD+ FP++
Sbjct: 124 SDKTFPIM 131


>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 1   SDRLFPLL 8
           SD+ FP++
Sbjct: 124 SDKTFPIM 131


>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 1   SDRLFPLL 8
           SD+ FP++
Sbjct: 123 SDKTFPIM 130


>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1   SDRLFPLL 8
           SD+ FP++
Sbjct: 109 SDKTFPIM 116


>sp|CEP1_HHV6U|CYTOPLASMIC envelopment protein 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 4   LFPLLNP 10
           LFP L+P
Sbjct: 144 LFPALSP 150


>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)

Query: 1   SDRLFPLL 8
           SD+ FP++
Sbjct: 108 SDKTFPIM 115


>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)

Query: 1   SDRLFPLL 8
           SD+ FP++
Sbjct: 108 SDKTFPIM 115




127|SequenceR|640|631|LPCHTSDRLF

>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 3   CHTSDRLF 10
           CH  DR F
Sbjct: 927 CHHKDRYF 934


>sp|SPIKE_ADE04|FIBER protein|Human adenovirus E serotype 4

Query: 2  PCHTSD 7
          PCHT +
Sbjct: 54 PCHTKN 59


>sp|VE2_HPV16|REGULATORY protein E2|Human papillomavirus type 16

Query: 2   PCHTSDRL 9
           PCHT+  L
Sbjct: 250 PCHTTKLL 257


>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P

Query: 1   LPCHTSDR 8
           LP H +DR
Sbjct: 399 LPSHVTDR 406


>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)

Query: 1   LPCHTSDRLF 10
           L CH S R++
Sbjct: 428 LTCHASGRVY 437


>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)

Query: 1   LPCHTSD 7
           L CH SD
Sbjct: 257 LNCHVSD 263


>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 1   LPCHTSDRL 9
           +PC   DRL
Sbjct: 478 IPCTVYDRL 486


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 1   LPCHTSDRL 9
           +PC   DRL
Sbjct: 478 IPCTVYDRL 486


>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)

Query: 2   PCHT 5
           PCHT
Sbjct: 182 PCHT 185


>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   PCHT 5
           PCHT
Sbjct: 182 PCHT 185


>sp|PG047_MONPV|IMMUNE evasion protein OPG047|Monkeypox virus (MPXV)

Query: 1   LPCHTSD 7
           L CHT D
Sbjct: 140 LLCHTKD 146


>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1   LPCHTSDRLF 10
           +P H  DRL 
Sbjct: 315 VPAHIWDRLM 324


>sp|VE2_HPV22|REGULATORY protein E2|Human papillomavirus 22

Query: 4   HTSDRL 9
           HT+DR+
Sbjct: 393 HTTDRI 398


>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1   LPCHTSDRLF 10
           +P H  DRL 
Sbjct: 315 VPAHIWDRLM 324


>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1   LPCHTSDRLF 10
           +P H  DRL 
Sbjct: 315 VPAHIWDRLM 324


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 3   CHTSDR 8
           C TSDR
Sbjct: 929 CPTSDR 934


>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1   LPCHTSDRLF 10
           +P H  DRL 
Sbjct: 315 VPAHIWDRLM 324


>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1   LPCHTSDRLF 10
           +P H  DRL 
Sbjct: 315 VPAHIWDRLM 324


>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)

Query: 1   LPCHTSDRL 9
           +PC   DRL
Sbjct: 478 IPCTVYDRL 486


>sp|VE8E2_HPV16|PROTEIN E8^E2C|Human papillomavirus type 16

Query: 2  PCHTSDRL 9
          PCHT+  L
Sbjct: 62 PCHTTKLL 69


>sp|PG121_MONPV|MRNA-DECAPPING protein OPG121|Monkeypox virus (MPXV)

Query: 5   TSDRLF 10
           TSD+LF
Sbjct: 149 TSDKLF 154


>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)

Query: 1   LPCHTSDRL 9
           L CH S +L
Sbjct: 481 LRCHNSKKL 489




128|SequenceR|645|636|ELAKELPCHT

>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1    ELAKELPCH 9
            +LAK L CH
Sbjct: 1194 DLAKALRCH 1202


>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)

Query: 3   AKELPCHT 10
            KELPC T
Sbjct: 472 GKELPCST 479


>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 3   AKELPCHT 10
            KELPC T
Sbjct: 472 GKELPCST 479


>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)

Query: 3   AKELPCHT 10
            KELPC T
Sbjct: 473 GKELPCST 480


>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African

Query: 3   AKELPCHT 10
            KELPC T
Sbjct: 473 GKELPCST 480


>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 3   AKELPCHT 10
            KELPC T
Sbjct: 472 GKELPCST 479


>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)

Query: 3   AKELPCHT 10
            KELPC T
Sbjct: 473 GKELPCST 480


>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)

Query: 3   AKELPCHT 10
            KELPC T
Sbjct: 473 GKELPCST 480


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1    ELAKELPC 8
            ELA+  PC
Sbjct: 1098 ELARRYPC 1105


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1    ELAKELPC 8
            ELA+  PC
Sbjct: 1098 ELARRYPC 1105


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1    ELAKELPC 8
            ELA+  PC
Sbjct: 1098 ELARRYPC 1105


>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 6    LPCH 9
            LPCH
Sbjct: 1861 LPCH 1864


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 5    ELPCHT 10
            ELPC T
Sbjct: 1877 ELPCET 1882


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 5    ELPCHT 10
            ELPC T
Sbjct: 1877 ELPCET 1882


>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)

Query: 3   AKELPCHT 10
            KE+PC T
Sbjct: 481 GKEIPCTT 488


>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)

Query: 3   AKELPCHT 10
            KE+PC T
Sbjct: 481 GKEIPCTT 488


>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   ELPCHT 10
           +LPC T
Sbjct: 464 DLPCET 469




129|SequenceR|650|641|RQQCIELAKE

>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 1    RQQCIELAKE 10
            +++C ELAK+
Sbjct: 1398 KKKCDELAKQ 1407


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 1    RQQCIELAKE 10
            +++C ELAK+
Sbjct: 1399 KKKCDELAKQ 1408


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 1    RQQCIELAKE 10
            +++C ELAK+
Sbjct: 1395 KKKCDELAKQ 1404


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1    RQQCIELAKE 10
            +++C ELAK+
Sbjct: 1398 KKKCDELAKQ 1407


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 1    RQQCIELAKE 10
            +++C ELAK+
Sbjct: 1402 KKKCDELAKQ 1411


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1    RQQCIELAKE 10
            +++C ELAK+
Sbjct: 1398 KKKCDELAKQ 1407


>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)

Query: 3  QCIELAKE 10
          QC+ELA E
Sbjct: 21 QCLELALE 28


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 4    CIELAK 9
            C+ELAK
Sbjct: 2072 CLELAK 2077


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 4    CIELAK 9
            C+ELAK
Sbjct: 2072 CLELAK 2077


>sp|UL88_HHV6Z|PROTEIN U59|Human herpesvirus 6B (strain Z29)

Query: 2   QQCIELAK 9
           Q+C ELA+
Sbjct: 189 QKCAELAR 196


>sp|UL88_HHV6U|PROTEIN U59|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   QQCIELAK 9
           Q+C ELA+
Sbjct: 189 QKCAELAR 196


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 1    RQQCIELAKE 10
            +++C ELA++
Sbjct: 1397 KKKCDELARQ 1406


>sp|NSP1_ROTHD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 1   RQQCIEL 7
           R++CIE+
Sbjct: 219 RRKCIEI 225


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 1   RQQCIELAK 9
           R  C+ +AK
Sbjct: 639 RSACVRMAK 647


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 1   RQQCIELAK 9
           R  C+ +AK
Sbjct: 639 RSACVRMAK 647




130|SequenceR|655|646|EEVFNRQQCI

>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   EVFNRQQ 8
           E FNR+Q
Sbjct: 358 ECFNRKQ 364


>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)

Query: 2   EVFNRQQ 8
           E FNR+Q
Sbjct: 358 ECFNRKQ 364


>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47

Query: 2  EVFNRQQC 9
          E+F++Q+C
Sbjct: 58 ELFHQQEC 65


>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20

Query: 2  EVFNRQQC 9
          E+F++Q+C
Sbjct: 58 ELFHQQEC 65


>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7

Query: 2  EVFNRQQC 9
          E+F++Q+C
Sbjct: 58 ELFHQQEC 65


>sp|RP35_MONPV|DNA-DIRECTED RNA polymerase 35 kDa|Monkeypox virus (MPXV)

Query: 2   EVFNRQ 7
           EVFNR+
Sbjct: 164 EVFNRE 169


>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36

Query: 2  EVFNRQQC 9
          E+F++Q+C
Sbjct: 58 ELFHQQEC 65


>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate

Query: 4    FNRQQCI 10
            F R QCI
Sbjct: 2198 FRRDQCI 2204


>sp|RP35_VAR67|DNA-DIRECTED RNA polymerase 35 kDa|Variola virus (isolate Human/India/Ind3/1967)

Query: 2   EVFNRQ 7
           EVFNR+
Sbjct: 164 EVFNRE 169


>sp|RP35_VACCT|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Tian Tan)

Query: 2   EVFNRQ 7
           EVFNR+
Sbjct: 164 EVFNRE 169


>sp|RP35_VACCC|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   EVFNRQ 7
           EVFNR+
Sbjct: 164 EVFNRE 169


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 2    EVFNRQ 7
            ++FNRQ
Sbjct: 1862 DIFNRQ 1867


>sp|RP35_VACCA|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 2   EVFNRQ 7
           EVFNR+
Sbjct: 164 EVFNRE 169


>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19

Query: 2  EVFNRQQC 9
          E+F++Q+C
Sbjct: 58 ELFHQQEC 65


>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)

Query: 3   VFNRQQCI 10
           VFN + C+
Sbjct: 212 VFNARTCV 219


>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)

Query: 2  EVFNRQQCI 10
          + FN  +CI
Sbjct: 19 QTFNAPECI 27


>sp|IL1BP_CWPXB|INTERLEUKIN-1-BINDING protein|Cowpox virus (strain Brighton Red)

Query: 2  EVFNRQQCI 10
          + FN  +CI
Sbjct: 19 QAFNAPECI 27




131|SequenceR|660|651|LLYVTEEVFN

>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2

Query: 1   LLYVTEEVFN 10
           LLYV  EVF+
Sbjct: 931 LLYVLFEVFD 940


>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41

Query: 1   LLYVTEEVFN 10
           LLYV  EVF+
Sbjct: 888 LLYVLFEVFD 897


>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12

Query: 1   LLYVTEEVFN 10
           LLYV  EVF+
Sbjct: 882 LLYVLFEVFD 891


>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40

Query: 1   LLYVTEEVFN 10
           LLYV  EVF+
Sbjct: 886 LLYVLFEVFD 895


>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5

Query: 1   LLYVTEEVFN 10
           LLYV  EVF+
Sbjct: 915 LLYVLFEVFD 924


>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5   TEEVFN 10
           TEE+FN
Sbjct: 336 TEELFN 341


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1    LLYVTEEVF 9
            LLY T++VF
Sbjct: 2268 LLYQTKKVF 2276


>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9

Query: 1   LLYVTEEVFN 10
           LLY+  EVF+
Sbjct: 906 LLYLLFEVFD 915


>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7

Query: 1   LLYVTEEVFN 10
           LLY+  EVF+
Sbjct: 900 LLYLLFEVFD 909


>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3

Query: 1   LLYVTEEVFN 10
           LLY+  EVF+
Sbjct: 907 LLYLLFEVFD 916


>sp|VP2_POVWU|MINOR capsid protein VP2|WU polyomavirus (WUPyV)

Query: 1   LLYVTEEV 8
           +LYV EE+
Sbjct: 340 ILYVLEEL 347




132|SequenceR|665|656|NGMRSLLYVT

>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)

Query: 2   GMRSLLY 8
           GMR LL+
Sbjct: 371 GMRQLLF 377


>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)

Query: 2   GMRSLLY 8
           GMR LL+
Sbjct: 371 GMRQLLF 377


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 3   MRSLLYV 9
           MRS LYV
Sbjct: 701 MRSTLYV 707


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 3   MRSLLYV 9
           MRS LYV
Sbjct: 701 MRSTLYV 707


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 3   MRSLLYV 9
           MRS LYV
Sbjct: 707 MRSTLYV 713


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 3   MRSLLYV 9
           MRS LYV
Sbjct: 707 MRSTLYV 713


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 3   MRSLLYV 9
           MRS LYV
Sbjct: 707 MRSTLYV 713


>sp|VGLJ_CHV1|ENVELOPE glycoprotein J|Cercopithecine herpesvirus 1 (CeHV-1) (Simian

Query: 3 MRSLLY 8
         MRSLL+
Sbjct: 1 MRSLLF 6


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    NGMRSLLYV 9
            NGM+   YV
Sbjct: 2405 NGMKRSFYV 2413


>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 MRSLLY 8
         MRSL+Y
Sbjct: 1 MRSLIY 6


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1    NGMRSLLYV 9
            NGM+   YV
Sbjct: 2405 NGMKRSFYV 2413


>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 MRSLLY 8
         MRSL+Y
Sbjct: 1 MRSLIY 6




133|SequenceR|670|661|LASRSNGMRS

>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain

Query: 1   LASRSNGMRS 10
           LASR+N + S
Sbjct: 658 LASRTNSVAS 667


>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate

Query: 1   LASRSNGMRS 10
           LASR+N + S
Sbjct: 661 LASRTNSVAS 670




134|SequenceR|675|666|EMIMKLASRS

 ***** No hits found ******


135|SequenceR|680|671|VDHLEEMIMK

>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12

Query: 2   DHLEEMIMK 10
           D +EE +MK
Sbjct: 724 DQMEESLMK 732


>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P

Query: 1   VDHLEE 6
           V+HLEE
Sbjct: 571 VNHLEE 576




136|SequenceR|685|676|EIAKDVDHLE

>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)

Query: 1   EIAKDVDH 8
           +IAKDVDH
Sbjct: 467 KIAKDVDH 474


>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3

Query: 1   EIAKDVDHL 9
           E+ +D+DHL
Sbjct: 352 EVDQDIDHL 360


>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3

Query: 1   EIAKDVDHL 9
           E+ +D+DHL
Sbjct: 350 EVDQDIDHL 358


>sp|PG148_VARV|DNA polymerase processivity factor component|Variola virus

Query: 2   IAKDVDHL 9
           + KDVDHL
Sbjct: 246 LVKDVDHL 253


>sp|PG148_VAR67|DNA polymerase processivity factor component|Variola virus (isolate

Query: 2   IAKDVDHL 9
           + KDVDHL
Sbjct: 246 LVKDVDHL 253


>sp|PG148_MONPV|DNA polymerase processivity factor component|Monkeypox virus (MPXV)

Query: 2   IAKDVDHL 9
           + KDVDHL
Sbjct: 246 LVKDVDHL 253


>sp|PG148_VACCC|DNA polymerase processivity factor component|Vaccinia virus (strain

Query: 2   IAKDVDHL 9
           + KDVDHL
Sbjct: 246 LVKDVDHL 253


>sp|A20_VACCA|DNA polymerase processivity factor component|Vaccinia virus (strain

Query: 2   IAKDVDHL 9
           + KDVDHL
Sbjct: 246 LVKDVDHL 253


>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2

Query: 1   EIAKDVDHL 9
           E+ KD+ HL
Sbjct: 345 EVDKDISHL 353


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 2    IAKDVDHLE 10
            I +D+ HLE
Sbjct: 3038 ILRDISHLE 3046


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 3   AKDVDHLE 10
           A DV+HLE
Sbjct: 843 AIDVEHLE 850


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 3   AKDVDHLE 10
           A DV+HLE
Sbjct: 843 AIDVEHLE 850


>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P

Query: 1   EIAKDVDHLE 10
           EIA D  H+E
Sbjct: 96  EIALDPSHVE 105


>sp|PG070_VARV|PROTEIN OPG070|Variola virus

Query: 4   KDVDH 8
           KD+DH
Sbjct: 201 KDIDH 205


>sp|PG070_VAR67|PROTEIN OPG070|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 4   KDVDH 8
           KD+DH
Sbjct: 201 KDIDH 205


>sp|PG070_VACCC|PROTEIN OPG070|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4   KDVDH 8
           KD+DH
Sbjct: 201 KDIDH 205


>sp|PG070_MONPV|PROTEIN OPG070|Monkeypox virus (MPXV)

Query: 4   KDVDH 8
           KD+DH
Sbjct: 201 KDIDH 205


>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse

Query: 1    EIAKDVDHLE 10
            E+A+D+ HL+
Sbjct: 1644 EMARDLVHLK 1653


>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United

Query: 1    EIAKDVDHLE 10
            E+A+D+ HL+
Sbjct: 1644 EMARDLVHLK 1653


>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)

Query: 1    EIAKDVDHL 9
            E+ KD+ HL
Sbjct: 1619 ELEKDLHHL 1627


>sp|NEF_HV2ST|PROTEIN Nef|Human immunodeficiency virus type 2

Query: 2   IAKDVDHL 9
           +A+D+ HL
Sbjct: 114 LARDMSHL 121




137|SequenceR|690|681|QEKAFEIAKD

>sp|NSP1_ROTHJ|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])

Query: 1   QEKAFEIAKD 10
           QEK +E  KD
Sbjct: 365 QEKIYEYVKD 374


>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain

Query: 2   EKAFEIAKD 10
           +K FE+AK+
Sbjct: 805 QKQFELAKE 813


>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate

Query: 2   EKAFEIAKD 10
           +K FE+AK+
Sbjct: 808 QKQFELAKE 816


>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain

Query: 1   QEKAFEIAKD 10
           +EK +E  KD
Sbjct: 365 EEKIYESVKD 374




138|SequenceR|695|686|LEGDDQEKAF

>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 3    GDDQEKAF 10
            G DQ+KA+
Sbjct: 994  GPDQQKAY 1001


>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 3    GDDQEKAF 10
            G DQ+KA+
Sbjct: 994  GPDQQKAY 1001


>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 3    GDDQEKAF 10
            G DQ+KA+
Sbjct: 994  GPDQQKAY 1001


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 4    DDQEKAF 10
            DDQ K F
Sbjct: 2015 DDQRKVF 2021


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 4    DDQEKAF 10
            DDQ K F
Sbjct: 2015 DDQRKVF 2021


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 4    DDQEKAF 10
            DDQ K F
Sbjct: 2015 DDQRKVF 2021


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 4    DDQEKAF 10
            DDQ K F
Sbjct: 2015 DDQRKVF 2021


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 4    DDQEKAF 10
            DDQ K F
Sbjct: 2015 DDQRKVF 2021


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 4    DDQEKAF 10
            DDQ K F
Sbjct: 1997 DDQRKVF 2003


>sp|U13_HHV6U|UNCHARACTERIZED protein U13|Human herpesvirus 6A (strain Uganda-1102)

Query: 3  GDDQEKA 9
          GD+ EKA
Sbjct: 76 GDNNEKA 82




139|SequenceR|700|691|ILDEWLEGDD

>sp|NSP4_ROTH3|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain

Query: 2   LDEWLEGDD 10
           L+EW EG++
Sbjct: 156 LNEWAEGEN 164


>sp|NSP4_ROTYO|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain

Query: 2   LDEWLEGDD 10
           LDEW+ G +
Sbjct: 156 LDEWVSGKN 164


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 2    LDEWLEGD 9
            L EW+ GD
Sbjct: 1958 LHEWISGD 1965


>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus

Query: 4   EWLEGD 9
           EWL GD
Sbjct: 580 EWLNGD 585


>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)

Query: 4   EWLEGD 9
           EWL GD
Sbjct: 580 EWLNGD 585


>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4   EWLEGD 9
           EWL GD
Sbjct: 580 EWLNGD 585


>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)

Query: 4   EWLEGD 9
           EWL GD
Sbjct: 580 EWLNGD 585


>sp|DUT_HHV11|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 1 (strain 17)

Query: 3   DEWLEG 8
           D WLEG
Sbjct: 163 DPWLEG 168


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 4   EWLEGD 9
           +WLEGD
Sbjct: 223 KWLEGD 228


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 4   EWLEGD 9
           +WLEGD
Sbjct: 223 KWLEGD 228


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 4   EWLEGD 9
           +WLEGD
Sbjct: 223 KWLEGD 228


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 4   EWLEGD 9
           +WLEGD
Sbjct: 223 KWLEGD 228


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 4   EWLEGD 9
           +WLEGD
Sbjct: 223 KWLEGD 228


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 5   WLEGD 9
           WLEGD
Sbjct: 224 WLEGD 228


>sp|PG130_VARV|39KDA core protein OPG130|Variola virus

Query: 2   LDEWLEGDD 10
           L +WL  DD
Sbjct: 106 LFDWLSADD 114


>sp|PG130_VAR67|39KDA core protein OPG130|Variola virus (isolate Human/India/Ind3/1967)

Query: 2   LDEWLEGDD 10
           L +WL  DD
Sbjct: 106 LFDWLSADD 114


>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)

Query: 4   EWLEGD 9
           +WLEG+
Sbjct: 223 QWLEGE 228


>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka

Query: 1  ILDEWLEGD 9
          I + WLE D
Sbjct: 26 ISNRWLESD 34


>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)

Query: 1  ILDEWLEGD 9
          I + WLE D
Sbjct: 26 ISNRWLESD 34


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 4    EWLEGDD 10
            EW+  DD
Sbjct: 3294 EWMSSDD 3300


>sp|NCAP_BUNLC|NUCLEOPROTEIN La Crosse

Query: 1   ILDEWLEGDD 10
           +LD++ E DD
Sbjct: 103 VLDQYNENDD 112


>sp|NCAP_BUNL8|NUCLEOPROTEIN La Crosse (isolate Human/United

Query: 1   ILDEWLEGDD 10
           +LD++ E DD
Sbjct: 103 VLDQYNENDD 112


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 4   EWLEGD 9
           +WLEG+
Sbjct: 223 QWLEGE 228


>sp|DUT_HHV2H|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 2 (strain

Query: 3   DEWLEG 8
           D WL+G
Sbjct: 161 DPWLDG 166


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 2   LDEWLEGDD 10
           L+EW E  D
Sbjct: 984 LEEWQEEHD 992


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 2   LDEWLEGDD 10
           L+EW E  D
Sbjct: 981 LEEWQEEHD 989


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 2   LDEWLEGDD 10
           L+EW E  D
Sbjct: 980 LEEWQEEHD 988


>sp|VPU_HV1YF|PROTEIN Vpu|Human immunodeficiency virus type 1

Query: 4  EWLEGDD 10
          EWL+GD+
Sbjct: 59 EWLDGDE 65


>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 1    ILDEW 5
            I+DEW
Sbjct: 1180 IVDEW 1184


>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)

Query: 4  EWLEGDD 10
          +W E DD
Sbjct: 7  KWWESDD 13


>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)

Query: 4  EWLEGDD 10
          +W E DD
Sbjct: 7  KWWESDD 13


>sp|E1BS_ADE41|E1B protein, small T-antigen|Human adenovirus F serotype 41

Query: 1   ILDEW 5
           ILD+W
Sbjct: 99  ILDQW 103


>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain

Query: 5   WLEGD 9
           WL+GD
Sbjct: 321 WLKGD 325


>sp|E1BS_ADE40|E1B protein, small T-antigen|Human adenovirus F serotype 40

Query: 1   ILDEW 5
           ILD+W
Sbjct: 99  ILDQW 103


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 5   WLEGDD 10
           WL+GD+
Sbjct: 222 WLKGDN 227


>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4   EWLEG 8
           EWL+G
Sbjct: 650 EWLKG 654


>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4   EWLEG 8
           EWL+G
Sbjct: 650 EWLKG 654


>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4   EWLEG 8
           EWL+G
Sbjct: 650 EWLKG 654


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 4   EWLEGD 9
           +WL+GD
Sbjct: 224 KWLKGD 229


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 2   LDEWLEGDD 10
           L+EW E  D
Sbjct: 981 LEEWHEEHD 989


>sp|UL124_HCMVM|UNCHARACTERIZED protein UL124|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   LDEWLEGDD 10
           L+ W +G D
Sbjct: 115 LEAWEQGSD 123


>sp|UL124_HCMVA|UNCHARACTERIZED protein UL124|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   LDEWLEGDD 10
           L+ W +G D
Sbjct: 117 LEAWEQGSD 125


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 4    EWLEGDD 10
            EW EG++
Sbjct: 1563 EWKEGEE 1569


>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain

Query: 4    EWLEGDD 10
            EW EG++
Sbjct: 1153 EWKEGEE 1159


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 4    EWLEGDD 10
            EW EG++
Sbjct: 1563 EWKEGEE 1569


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 4    EWLEGDD 10
            EW EG++
Sbjct: 1563 EWKEGEE 1569


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 4    EWLEGDD 10
            EW EG++
Sbjct: 1563 EWKEGEE 1569


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 4    EWLEGDD 10
            EW EG++
Sbjct: 1563 EWKEGEE 1569


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 4    EWLEGDD 10
            EW EG++
Sbjct: 1563 EWKEGEE 1569


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 4    EWLEGDD 10
            EW EG++
Sbjct: 1563 EWKEGEE 1569


>sp|E1BS_ADE12|E1B protein, small T-antigen|Human adenovirus A serotype 12

Query: 1   ILDEWLE 7
           ILD+W E
Sbjct: 99  ILDKWSE 105




140|SequenceR|705|696|DISYLILDEW

>sp|VP7_ROTHQ|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 1   DISYLILDEW 10
           +++ LIL+EW
Sbjct: 154 ELANLILNEW 163


>sp|VP7_ROTH7|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United

Query: 1   DISYLILDEW 10
           +++ LIL+EW
Sbjct: 154 ELANLILNEW 163


>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)

Query: 1    DISYLILDEW 10
            DI+Y++   W
Sbjct: 1879 DINYILKQSW 1888


>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)

Query: 1    DISYLILDEW 10
            D+ YL+   W
Sbjct: 1860 DLKYLLTQSW 1869


>sp|VP7_ROTHU|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 1   DISYLILDEW 10
           +++ LIL+EW
Sbjct: 154 ELADLILNEW 163


>sp|VP7_ROTKU|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 1   DISYLILDEW 10
           +++ LIL+EW
Sbjct: 154 ELADLILNEW 163


>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain

Query: 1    DISYLILDEW 10
            DI Y++   W
Sbjct: 1879 DIDYILKQSW 1888


>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)

Query: 1    DISYLILDEW 10
            DI Y++   W
Sbjct: 1879 DIDYILKQSW 1888


>sp|VP7_ROTHX|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 1   DISYLILDEW 10
           +++ LIL+EW
Sbjct: 154 ELADLILNEW 163


>sp|VP7_ROTHW|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United

Query: 1   DISYLILDEW 10
           +++ LIL+EW
Sbjct: 154 ELADLILNEW 163


>sp|VP7_ROTHT|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United

Query: 5   LILDEW 10
           LIL+EW
Sbjct: 158 LILNEW 163


>sp|VP7_ROTHV|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 5   LILDEW 10
           LIL+EW
Sbjct: 158 LILNEW 163


>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3   SYLILDEW 10
           SY+ +D W
Sbjct: 349 SYVYIDYW 356


>sp|VP7_ROTWI|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United

Query: 5   LILDEW 10
           LIL+EW
Sbjct: 158 LILNEW 163


>sp|VP7_ROTHL|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   LILDEW 10
           LIL+EW
Sbjct: 158 LILNEW 163


>sp|VP7_ROTHJ|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 1   DISYLILDEW 10
           +++ LIL+EW
Sbjct: 154 ELADLILNEW 163


>sp|VP7_ROTAD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United

Query: 1   DISYLILDEW 10
           +++ LIL+EW
Sbjct: 154 ELADLILNEW 163


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 1   DISYLI 6
           DISYLI
Sbjct: 249 DISYLI 254


>sp|VP7_ROTHK|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 1   DISYLILDEW 10
           +++ LIL+EW
Sbjct: 154 ELADLILNEW 163


>sp|VP7_ROTHB|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   LILDEW 10
           LIL+EW
Sbjct: 158 LILNEW 163


>sp|VP7_ROTH9|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 1   DISYLILDEW 10
           +++ LIL+EW
Sbjct: 154 ELADLILNEW 163


>sp|VP7_ROTHM|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   LILDEW 10
           LIL+EW
Sbjct: 158 LILNEW 163


>sp|VP7_ROTH6|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   LILDEW 10
           LIL+EW
Sbjct: 158 LILNEW 163


>sp|VP7_ROTHH|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   LILDEW 10
           LIL+EW
Sbjct: 158 LILNEW 163


>sp|VP7_ROTHD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United

Query: 5   LILDEW 10
           LIL+EW
Sbjct: 158 LILNEW 163


>sp|VP7_ROTHA|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 5   LILDEW 10
           LIL+EW
Sbjct: 158 LILNEW 163


>sp|VP7_ROTH4|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   LILDEW 10
           LIL+EW
Sbjct: 158 LILNEW 163


>sp|VP7_ROTHS|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   LILDEW 10
           LIL+EW
Sbjct: 158 LILNEW 163


>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate

Query: 1   DISYLILDEW 10
           D+S   L+EW
Sbjct: 592 DVSAPDLEEW 601


>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United

Query: 1   DISYLILDEW 10
           D+S   L+EW
Sbjct: 592 DVSAPDLEEW 601


>sp|VP7_ROT41|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 1   DISYLILDEW 10
           +++ LIL+EW
Sbjct: 154 ELADLILNEW 163


>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3   SYLILDEW 10
           SY+ +D W
Sbjct: 349 SYVYIDYW 356


>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3   SYLILDEW 10
           SY+ +D W
Sbjct: 348 SYVYIDYW 355


>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United

Query: 3   SYLILDEW 10
           SY+ +D W
Sbjct: 348 SYVYIDYW 355


>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3   SYLILDEW 10
           SY+ +D W
Sbjct: 348 SYVYIDYW 355




141|SequenceR|710|701|IFPPKDISYL

>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1    IFPPKDISYL 10
            + PP+++SYL
Sbjct: 1489 VVPPEEVSYL 1498


>sp|VIF_HV2UC|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 1  IFPPKDISYL 10
          IFP K+ +YL
Sbjct: 58 IFPLKEEAYL 67


>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 3  PPKDISY 9
          PPK +SY
Sbjct: 93 PPKVVSY 99


>sp|Y168_ADE02|UNCHARACTERIZED protein C-168|Human adenovirus C serotype 2

Query: 3   PPKDIS 8
           PP+D+S
Sbjct: 117 PPRDLS 122


>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1

Query: 1   IFPPKDISYL 10
           I PPKD+  L
Sbjct: 381 ITPPKDLKQL 390


>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 1   IFPPKDISYL 10
           I PPKD+  L
Sbjct: 381 ITPPKDLKQL 390


>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)

Query: 3   PPKDIS 8
           PP DIS
Sbjct: 338 PPTDIS 343


>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)

Query: 3   PPKDIS 8
           PP DIS
Sbjct: 338 PPTDIS 343


>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)

Query: 3   PPKDIS 8
           PP DIS
Sbjct: 338 PPTDIS 343


>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   IFPPKDIS 8
           +FP KD++
Sbjct: 187 VFPTKDVA 194


>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1   IFPPKDIS 8
           +FP KD++
Sbjct: 177 VFPTKDVA 184


>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   IFPPKDIS 8
           +FP KD++
Sbjct: 187 VFPTKDVA 194


>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)

Query: 3   PPKDISY 9
           PPK +SY
Sbjct: 94  PPKVVSY 100


>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 3   PPKDISY 9
           PPK +SY
Sbjct: 94  PPKVVSY 100


>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 3   PPKDISY 9
           PPK +SY
Sbjct: 94  PPKVVSY 100


>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain

Query: 3  PPKDISY 9
          PPK +SY
Sbjct: 93 PPKVVSY 99


>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)

Query: 3   PPKDISY 9
           PPK +SY
Sbjct: 94  PPKVVSY 100


>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 3  PPKDISY 9
          PPK +SY
Sbjct: 93 PPKVVSY 99


>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)

Query: 1   IFPPKDI 7
           + PPKD+
Sbjct: 414 LLPPKDV 420


>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain

Query: 3   PPKDISY 9
           PPK +SY
Sbjct: 94  PPKVVSY 100


>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)

Query: 1   IFPPKDI 7
           + PPKD+
Sbjct: 416 LLPPKDV 422


>sp|UNG_HHV8P|URACIL-DNA glycosylase|Human herpesvirus 8 type P

Query: 1  IFPPKD 6
          ++PP+D
Sbjct: 61 VYPPQD 66


>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)

Query: 1   IFPPKDI 7
           + PPKD+
Sbjct: 416 LLPPKDV 422


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 2    FPPKDISYL 10
            FPPK +  L
Sbjct: 1588 FPPKTVPCL 1596


>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)

Query: 3   PPKDISYL 10
           P KDI++L
Sbjct: 486 PEKDIAFL 493


>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 3   PPKDISY 9
           PPK +SY
Sbjct: 94  PPKVVSY 100


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 2    FPPKDISYL 10
            FPPK +  L
Sbjct: 1588 FPPKTVPCL 1596


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 2    FPPKDISYL 10
            FPPK +  L
Sbjct: 1588 FPPKTVPCL 1596


>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)

Query: 3   PPKDISY 9
           PPK +SY
Sbjct: 94  PPKVVSY 100


>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 3   PPKDISY 9
           PPK +SY
Sbjct: 94  PPKVVSY 100


>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)

Query: 3   PPKDISYL 10
           P KDI++L
Sbjct: 486 PEKDIAFL 493


>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 3  PPKDISY 9
          PPK ++Y
Sbjct: 93 PPKVVNY 99


>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 3  PPKDISY 9
          PPK ++Y
Sbjct: 93 PPKVVNY 99


>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)

Query: 3  PPKDISY 9
          PPK ++Y
Sbjct: 93 PPKVVNY 99


>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)

Query: 3  PPKDISY 9
          PPK ++Y
Sbjct: 93 PPKVVNY 99


>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2   FPPKDIS 8
           FPP DI+
Sbjct: 98  FPPHDIT 104


>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)

Query: 3   PPKDISYL 10
           PP D SYL
Sbjct: 320 PPGDGSYL 327


>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)

Query: 1   IFPPKDISYL 10
           I PP D+S L
Sbjct: 231 IAPPFDVSRL 240


>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B

Query: 1   IFPPKDI 7
           I PPKD+
Sbjct: 542 ISPPKDL 548


>sp|VSGP_EBOG4|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)

Query: 3  PPKDISY 9
          PPK ++Y
Sbjct: 93 PPKVVNY 99


>sp|VSGP_EBOEC|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)

Query: 3  PPKDISY 9
          PPK ++Y
Sbjct: 93 PPKVVNY 99




142|SequenceR|715|706|NLLGTIFPPK

>sp|UL76_HCMVA|PROTEIN UL76|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2  LLGTIFPPK 10
          LLG +FPP+
Sbjct: 51 LLGGLFPPE 59


>sp|UL76_HCMVM|PROTEIN UL76|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2  LLGTIFPPK 10
          LLG +FPP+
Sbjct: 51 LLGGLFPPE 59


>sp|ORF3_TTVG1|UNCHARACTERIZED ORF3 protein|Torque teno midi virus 1

Query: 1  NLLGTIFPP 9
          +LL +IFPP
Sbjct: 44 HLLASIFPP 52


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2    LLGTIFPP 9
            L  T+FPP
Sbjct: 4685 LFSTVFPP 4692


Query: 1    NLLGTIFPP 9
            NL+  IF P
Sbjct: 3002 NLIANIFTP 3010


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2    LLGTIFPP 9
            L  T+FPP
Sbjct: 4708 LFSTVFPP 4715


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1    NLLGTIFPP 9
            NL+  IF P
Sbjct: 3002 NLIANIFTP 3010


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 4    GTIFP 8
            GTIFP
Sbjct: 1402 GTIFP 1406


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)

Query: 4    GTIFP 8
            GTIFP
Sbjct: 1403 GTIFP 1407


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 4    GTIFP 8
            GTIFP
Sbjct: 1402 GTIFP 1406


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 4    GTIFP 8
            GTIFP
Sbjct: 1402 GTIFP 1406


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 4    GTIFP 8
            GTIFP
Sbjct: 1402 GTIFP 1406


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)

Query: 4    GTIFP 8
            GTIFP
Sbjct: 1402 GTIFP 1406


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 4    GTIFP 8
            GTIFP
Sbjct: 1402 GTIFP 1406


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 4    GTIFP 8
            GTIFP
Sbjct: 1402 GTIFP 1406


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 4    GTIFP 8
            GTIFP
Sbjct: 1402 GTIFP 1406


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 4    GTIFP 8
            GTIFP
Sbjct: 1402 GTIFP 1406


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 4    GTIFP 8
            GTIFP
Sbjct: 1402 GTIFP 1406


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 4    GTIFP 8
            GTIFP
Sbjct: 1403 GTIFP 1407


>sp|UNG_HHV8P|URACIL-DNA glycosylase|Human herpesvirus 8 type P

Query: 2  LLGTIFPPK 10
          L  T++PP+
Sbjct: 57 LTTTVYPPQ 65


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 2   LLGTIFPPK 10
           L+ T+FP K
Sbjct: 665 LIQTLFPDK 673


>sp|VP1_POVJC|MAJOR capsid protein VP1|JC polyomavirus (JCPyV) (JCV)

Query: 4   GTIFP 8
           GTIFP
Sbjct: 168 GTIFP 172




143|SequenceR|720|711|HTGINNLLGT

>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 1   HTGINNLLG 9
           HT ++NL G
Sbjct: 607 HTKVDNLFG 615


>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)

Query: 4   INNLLGT 10
           INNL GT
Sbjct: 426 INNLFGT 432


>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)

Query: 4   INNLLGT 10
           INNL GT
Sbjct: 426 INNLFGT 432


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 1   HTGINNLL 8
           H GINN L
Sbjct: 222 HQGINNKL 229


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra

Query: 1   HTGINNLL 8
           H GINN L
Sbjct: 222 HQGINNKL 229


>sp|VE2_HPV24|REGULATORY protein E2|Human papillomavirus 24

Query: 1   HTGINNLLG 9
           HTGI  L+G
Sbjct: 155 HTGIYYLIG 163


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    HTGINNLLG 9
            HT IN+ LG
Sbjct: 2821 HTPINSWLG 2829


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1    HTGINNLLGT 10
            HT +N+ LG+
Sbjct: 2832 HTPVNSWLGS 2841


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 2   TGINNLLG 9
           TG++ LLG
Sbjct: 446 TGVDELLG 453


>sp|PG132_VARV|VIRION morphogenesis protein OPG132|Variola virus

Query: 1   HTGINNL 7
            TGINN+
Sbjct: 300 QTGINNV 306


>sp|PG132_VAR67|VIRION morphogenesis protein OPG132|Variola virus (isolate

Query: 1   HTGINNL 7
            TGINN+
Sbjct: 300 QTGINNV 306


>sp|PG132_VACCC|VIRION morphogenesis protein OPG132|Vaccinia virus (strain Copenhagen)

Query: 1   HTGINNL 7
            TGINN+
Sbjct: 300 QTGINNV 306


>sp|PG132_MONPV|VIRION morphogenesis protein OPG132|Monkeypox virus (MPXV)

Query: 1   HTGINNL 7
            TGINN+
Sbjct: 300 QTGINNV 306


>sp|LAP_YLDV|E3 ubiquitin-protein ligase LAP|Yaba-like disease virus (YLDV)

Query: 2   TGINNLL 8
           TGIN+L+
Sbjct: 103 TGINDLI 109


>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)

Query: 2   TGINNL 7
           +GINNL
Sbjct: 285 SGINNL 290


>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)

Query: 2   TGINNL 7
           +GINNL
Sbjct: 285 SGINNL 290


>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)

Query: 2   TGINNL 7
           +GINNL
Sbjct: 285 SGINNL 290


>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)

Query: 2   TGINNL 7
           +GINNL
Sbjct: 285 SGINNL 290


>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)

Query: 2   TGINNL 7
           +GINNL
Sbjct: 285 SGINNL 290


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 4   INNLLGT 10
           ++NLLGT
Sbjct: 613 LSNLLGT 619


>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)

Query: 3  GINNLL 8
          GINN+L
Sbjct: 38 GINNVL 43


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 5   NNLLGT 10
           NN++GT
Sbjct: 792 NNMMGT 797


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 5   NNLLGT 10
           NN++GT
Sbjct: 792 NNMMGT 797


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 5   NNLLGT 10
           NN++GT
Sbjct: 792 NNMMGT 797


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 4   INNLLGT 10
           ++NLLGT
Sbjct: 613 LSNLLGT 619


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 5   NNLLGT 10
           NN++GT
Sbjct: 792 NNMMGT 797


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 5   NNLLGT 10
           NN++GT
Sbjct: 792 NNMMGT 797


>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate

Query: 1  HTGINNL 7
          H G+NN 
Sbjct: 90 HNGVNNF 96




144|SequenceR|725|716|LIPDVHTGIN

>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 1    LIPDVHT 7
            L+P+VHT
Sbjct: 2240 LLPNVHT 2246


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 1    LIPDVHT 7
            L+P+VHT
Sbjct: 2240 LLPNVHT 2246


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 1    LIPDVHT 7
            L+P+VHT
Sbjct: 2241 LLPNVHT 2247


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 1    LIPDVHT 7
            L+P+VHT
Sbjct: 2201 LLPNVHT 2207


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 1    LIPDVHT 7
            L+P+VHT
Sbjct: 2201 LLPNVHT 2207


>sp|PKG3_ADE12|PACKAGING protein 3|Human adenovirus A serotype 12

Query: 3   PDVHTGIN 10
           PD H+GI+
Sbjct: 115 PDEHSGIS 122


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 1    LIPDVHT 7
            L+P++HT
Sbjct: 2242 LLPNIHT 2248


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1    LIPDVHT 7
            L+P++HT
Sbjct: 2229 LLPNIHT 2235


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1    LIPDVHTG 8
            L+ D+HTG
Sbjct: 1111 LLKDLHTG 1118


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1    LIPDVHTG 8
            L+ D+HTG
Sbjct: 1111 LLKDLHTG 1118


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1    LIPDVHT 7
            L+P++HT
Sbjct: 2223 LLPNIHT 2229


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1    LIPDVHT 7
            L+P++HT
Sbjct: 2223 LLPNIHT 2229


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1    LIPDVHT 7
            L+P++HT
Sbjct: 2215 LLPNIHT 2221


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 1    LIPDVHT 7
            L+P++HT
Sbjct: 2240 LLPNIHT 2246


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 1    LIPDVHT 7
            L+P++HT
Sbjct: 2164 LLPNIHT 2170


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1    LIPDVHT 7
            L+P++HT
Sbjct: 2224 LLPNIHT 2230


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1    LIPDVHT 7
            L+P++HT
Sbjct: 2204 LLPNIHT 2210


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1    LIPDVHT 7
            L+P++HT
Sbjct: 2201 LLPNIHT 2207


>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 1    LIPDVHT 7
            L+P++HT
Sbjct: 2197 LLPNIHT 2203


>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5

Query: 3   PDVHTGIN 10
           PD  TGI+
Sbjct: 138 PDARTGIS 145


>sp|PKG3_ADE02|PACKAGING protein 3|Human adenovirus C serotype 2

Query: 3   PDVHTGIN 10
           PD  TGI+
Sbjct: 138 PDARTGIS 145


>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)

Query: 2   IPDVHTGIN 10
           +PDVH  I+
Sbjct: 439 LPDVHKQIS 447


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 1    LIPDVHT 7
            L P++HT
Sbjct: 2138 LFPNIHT 2144


>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)

Query: 3   PDVHTGIN 10
           PD H G N
Sbjct: 140 PDYHLGKN 147


>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   PDVHTGIN 10
           PD H G N
Sbjct: 140 PDYHLGKN 147


>sp|YVD2_VACCC|UNCHARACTERIZED 8.6 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4  DVHTGIN 10
          D+H GIN
Sbjct: 62 DIHGGIN 68


>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins

Query: 2   IPDVHTGIN 10
           +PDVH  I+
Sbjct: 439 LPDVHERIS 447


>sp|TAT_HV1MV|PROTEIN Tat|Human immunodeficiency virus type 1

Query: 2  IPDVHTG 8
          +P+ HTG
Sbjct: 68 VPEQHTG 74


>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)

Query: 2   IPDVHTGIN 10
           +PDVH  ++
Sbjct: 439 LPDVHNQVS 447


>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)

Query: 2   IPDVHTGIN 10
           +PDVH  ++
Sbjct: 439 LPDVHNQVS 447


>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)

Query: 2   IPDVHTGIN 10
           +PDVH  ++
Sbjct: 439 LPDVHNQVS 447


>sp|NP03_HHV2H|NUCLEAR phosphoprotein UL3|Human herpesvirus 2 (strain HG52)

Query: 3  PDVHTG 8
          PD H G
Sbjct: 58 PDAHVG 63


>sp|NP03_HHV23|NUCLEAR phosphoprotein UL3|Human herpesvirus 2 (strain 333)

Query: 3  PDVHTG 8
          PD H G
Sbjct: 58 PDAHVG 63


>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)

Query: 2   IPDVHTGIN 10
           +PDVH  ++
Sbjct: 439 LPDVHKQVS 447


>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 2   IPDVHT 7
           IPDV+T
Sbjct: 575 IPDVYT 580


>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)

Query: 2   IPDVHTGIN 10
           +PDVH  ++
Sbjct: 439 LPDVHKQVS 447


>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)

Query: 2   IPDVHTGIN 10
           +PDVH  ++
Sbjct: 439 LPDVHEQVS 447


>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)

Query: 2   IPDVHTGIN 10
           +PDVH  ++
Sbjct: 439 LPDVHKQVS 447


>sp|ORF11_HHV8P|PROTEIN ORF11|Human herpesvirus 8 type P

Query: 1   LIPDVHTG 8
           L PD H G
Sbjct: 350 LEPDTHIG 357


>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)

Query: 2   IPDVHTGIN 10
           +PDVH  ++
Sbjct: 439 LPDVHEQVS 447


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 1  LIPDVH 6
          L+P+VH
Sbjct: 8  LLPEVH 13


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 1  LIPDVH 6
          L+P+VH
Sbjct: 8  LLPEVH 13


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 1  LIPDVH 6
          L+P+VH
Sbjct: 8  LLPEVH 13




145|SequenceR|730|721|IRHILLIPDV

>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)

Query: 1  IRHILLIP 8
          I+HI+++P
Sbjct: 31 IKHIIIVP 38


>sp|NCAP_MEASC|NUCLEOPROTEIN virus (strain Ichinose-B95a) (MeV)

Query: 1  IRHILLIP 8
          I+HI+++P
Sbjct: 31 IKHIIIVP 38


>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)

Query: 1  IRHILLIP 8
          I+HI+++P
Sbjct: 31 IKHIIIVP 38


>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)

Query: 1  IRHILLIP 8
          I+HI+++P
Sbjct: 31 IKHIIIVP 38


>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)

Query: 1  IRHILLIP 8
          I+HI+++P
Sbjct: 31 IKHIIIVP 38


>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)

Query: 1  IRHILLIP 8
          I+HI+++P
Sbjct: 31 IKHIIIVP 38


>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)

Query: 1  IRHILLIP 8
          I+HI+++P
Sbjct: 31 IKHIIIVP 38


>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)

Query: 1  IRHILLIP 8
          I+HI+++P
Sbjct: 31 IKHIIIVP 38


>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)

Query: 1  IRHILLIP 8
          I+HI+++P
Sbjct: 31 IKHIIIVP 38


>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)

Query: 1  IRHILLIP 8
          I+HI+++P
Sbjct: 31 IKHIIIVP 38


>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)

Query: 1  IRHILLIP 8
          I+HI+++P
Sbjct: 31 IKHIIIVP 38


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1    IRHILLIPD 9
            +RHIL  PD
Sbjct: 992  MRHILEKPD 1000


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1    IRHILLIPD 9
            +RHIL  PD
Sbjct: 992  MRHILERPD 1000


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1    IRHILLIPD 9
            +RHIL  PD
Sbjct: 992  MRHILERPD 1000


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1    IRHILLIPD 9
            +RHIL  PD
Sbjct: 992  MRHILERPD 1000


>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Dumas)

Query: 2    RHILLIPD 9
            RH LL PD
Sbjct: 1133 RHALLEPD 1140


>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka

Query: 2    RHILLIPD 9
            RH LL PD
Sbjct: 1133 RHALLEPD 1140


>sp|UL116_HCMVM|UNCHARACTERIZED protein UL116|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   RHILLIP 8
           RH L++P
Sbjct: 305 RHTLIVP 311


>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  IRHILLIPDV 10
          +RH+   PDV
Sbjct: 20 LRHLTQKPDV 29


>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)

Query: 1  IRHILLIPDV 10
          +RH+   PDV
Sbjct: 20 LRHLTQKPDV 29


>sp|MC132_MCV1|PROTEIN MC132|Molluscum contagiosum virus subtype 1

Query: 2   RHILLIPD 9
           RH+ L PD
Sbjct: 209 RHLQLRPD 216


>sp|UL116_HCMVA|UNCHARACTERIZED protein UL116|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   RHILLIP 8
           RH L++P
Sbjct: 306 RHTLIVP 312




146|SequenceR|735|726|EMGEKIRHIL

>sp|VE6_HPV44|PROTEIN E6|Human papillomavirus 44

Query: 4   EKIRHIL 10
           EK+RHIL
Sbjct: 115 EKVRHIL 121


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 1    EMGEKIRHI 9
            E G+K+RHI
Sbjct: 1593 EPGKKVRHI 1601


>sp|VE6_HPV13|PROTEIN E6|Human papillomavirus 13

Query: 4   EKIRHIL 10
           EK+RHIL
Sbjct: 115 EKLRHIL 121


>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   EMGEKIRHIL 10
           EM  KI+HIL
Sbjct: 396 EMYTKIKHIL 405


>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   EMGEKIRHIL 10
           EM  KI+HIL
Sbjct: 396 EMYTKIKHIL 405


>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka

Query: 1   EMGEKIRHIL 10
           ++GEK+ HI+
Sbjct: 869 KIGEKMAHII 878


>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)

Query: 1   EMGEKIRHIL 10
           ++GEK+ HI+
Sbjct: 869 KIGEKMAHII 878


>sp|VE6_HPV6B|PROTEIN E6|Human papillomavirus type 6b

Query: 4   EKIRHIL 10
           EK++HIL
Sbjct: 115 EKVKHIL 121


>sp|VE6_HPV6A|PROTEIN E6|Human papillomavirus type 6a

Query: 4   EKIRHIL 10
           EK++HIL
Sbjct: 115 EKVKHIL 121


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 2    MGEKIRHIL 10
            +GEK +H+L
Sbjct: 2532 LGEKWKHLL 2540


>sp|VE6_HPV11|PROTEIN E6|Human papillomavirus 11

Query: 4   EKIRHIL 10
           EK++HIL
Sbjct: 115 EKLKHIL 121


>sp|XCORE_HBVC4|PUTATIVE X-Core fused protein|Hepatitis B virus genotype C

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 269 MGLKIRQLL 277


>sp|HBEAG_HBVH3|EXTERNAL core antigen|Hepatitis B virus genotype H

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 122 MGLKIRQLL 130


>sp|HBEAG_HBVF6|EXTERNAL core antigen|Hepatitis B virus genotype F2

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 122 MGLKIRQLL 130


>sp|HBEAG_HBVF1|EXTERNAL core antigen|Hepatitis B virus genotype F2

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 122 MGLKIRQLL 130


>sp|HBEAG_HBVCJ|EXTERNAL core antigen|Hepatitis B virus genotype C

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 122 MGLKIRQLL 130


>sp|HBEAG_HBVC7|EXTERNAL core antigen|Hepatitis B virus genotype C

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 122 MGLKIRQLL 130


>sp|HBEAG_HBVC3|EXTERNAL core antigen|Hepatitis B virus genotype C

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 122 MGLKIRQLL 130


>sp|HBEAG_HBVC1|EXTERNAL core antigen|Hepatitis B virus genotype C

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 122 MGLKIRQLL 130


>sp|HBEAG_HBVC0|EXTERNAL core antigen|Hepatitis B virus genotype C

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 122 MGLKIRQLL 130


>sp|HBEAG_HBVB4|EXTERNAL core antigen|Hepatitis B virus genotype B/C

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 122 MGLKIRQLL 130


>sp|HBEAG_HBVB2|EXTERNAL core antigen|Hepatitis B virus genotype B2

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 122 MGLKIRQLL 130


>sp|HBEAG_HBVA9|EXTERNAL core antigen|Hepatitis B virus genotype A3

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 122 MGLKIRQLL 130


>sp|HBEAG_HBVA8|EXTERNAL core antigen|Hepatitis B virus genotype A3

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 122 MGLKIRQLL 130


>sp|HBEAG_HBVA7|EXTERNAL core antigen|Hepatitis B virus genotype A2

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 122 MGLKIRQLL 130


>sp|HBEAG_HBVA6|EXTERNAL core antigen|Hepatitis B virus genotype A1

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 122 MGLKIRQLL 130


>sp|HBEAG_HBVA5|EXTERNAL core antigen|Hepatitis B virus genotype A1

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 122 MGLKIRQLL 130


>sp|HBEAG_HBVA4|EXTERNAL core antigen|Hepatitis B virus genotype A2

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 122 MGLKIRQLL 130


>sp|HBEAG_HBVA2|EXTERNAL core antigen|Hepatitis B virus genotype A2

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 122 MGLKIRQLL 130


>sp|CAPSD_HBVH3|CAPSID protein|Hepatitis B virus genotype H

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 93  MGLKIRQLL 101


>sp|CAPSD_HBVG3|CAPSID protein|Hepatitis B virus genotype G

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 105 MGLKIRQLL 113


>sp|CAPSD_HBVG1|CAPSID protein|Hepatitis B virus genotype G

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 105 MGLKIRQLL 113


>sp|CAPSD_HBVF6|CAPSID protein|Hepatitis B virus genotype F2

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 93  MGLKIRQLL 101


>sp|CAPSD_HBVF1|CAPSID protein|Hepatitis B virus genotype F2

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 93  MGLKIRQLL 101


>sp|CAPSD_HBVCJ|CAPSID protein|Hepatitis B virus genotype C

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 93  MGLKIRQLL 101


>sp|CAPSD_HBVC9|CAPSID protein|Hepatitis B virus genotype C

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 93  MGLKIRQLL 101


>sp|CAPSD_HBVC8|CAPSID protein|Hepatitis B virus genotype C

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 93  MGLKIRQLL 101


>sp|CAPSD_HBVC7|CAPSID protein|Hepatitis B virus genotype C

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 93  MGLKIRQLL 101


>sp|CAPSD_HBVC5|CAPSID protein|Hepatitis B virus genotype C

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 93  MGLKIRQLL 101


>sp|CAPSD_HBVC4|CAPSID protein|Hepatitis B virus genotype C

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 93  MGLKIRQLL 101


>sp|CAPSD_HBVC3|CAPSID protein|Hepatitis B virus genotype C

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 93  MGLKIRQLL 101


>sp|CAPSD_HBVC1|CAPSID protein|Hepatitis B virus genotype C

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 93  MGLKIRQLL 101


>sp|CAPSD_HBVC0|CAPSID protein|Hepatitis B virus genotype C

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 93  MGLKIRQLL 101


>sp|CAPSD_HBVB8|CAPSID protein|Hepatitis B virus genotype B1

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 93  MGLKIRQLL 101


>sp|CAPSD_HBVB7|CAPSID protein|Hepatitis B virus genotype B1

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 93  MGLKIRQLL 101


>sp|CAPSD_HBVB6|CAPSID protein|Hepatitis B virus genotype B2

Query: 2   MGEKIRHIL 10
           MG K+R IL
Sbjct: 93  MGLKLRQIL 101


>sp|CAPSD_HBVB4|CAPSID protein|Hepatitis B virus genotype B/C

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 93  MGLKIRQLL 101


>sp|CAPSD_HBVB3|CAPSID protein|Hepatitis B virus genotype B2

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 93  MGLKIRQLL 101


>sp|CAPSD_HBVB2|CAPSID protein|Hepatitis B virus genotype B2

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 93  MGLKIRQLL 101


>sp|CAPSD_HBVA9|CAPSID protein|Hepatitis B virus genotype A3

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 93  MGLKIRQLL 101


>sp|CAPSD_HBVA8|CAPSID protein|Hepatitis B virus genotype A3

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 93  MGLKIRQLL 101


>sp|CAPSD_HBVA7|CAPSID protein|Hepatitis B virus genotype A2

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 93  MGLKIRQLL 101


>sp|CAPSD_HBVA6|CAPSID protein|Hepatitis B virus genotype A1

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 93  MGLKIRQLL 101


>sp|CAPSD_HBVA5|CAPSID protein|Hepatitis B virus genotype A1

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 93  MGLKIRQLL 101


>sp|CAPSD_HBVA4|CAPSID protein|Hepatitis B virus genotype A2

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 93  MGLKIRQLL 101


>sp|CAPSD_HBVA2|CAPSID protein|Hepatitis B virus genotype A2

Query: 2   MGEKIRHIL 10
           MG KIR +L
Sbjct: 93  MGLKIRQLL 101


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 3    GEKIRHIL 10
            GE+ RH++
Sbjct: 5710 GEQFRHLI 5717


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 3    GEKIRHIL 10
            GEK +H++
Sbjct: 6080 GEKFKHLI 6087


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 3    GEKIRHIL 10
            GEK +H++
Sbjct: 6130 GEKFKHLI 6137


>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)

Query: 1   EMGEKIRHI 9
           E GE ++HI
Sbjct: 310 EFGEFLKHI 318


>sp|PG189_VACCC|ANKYRIN repeat protein OPG189|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  EMGEKIRHI 9
          E GE I HI
Sbjct: 64 EYGENILHI 72


>sp|PG189_VARV|ANKYRIN repeat protein OPG189|Variola virus

Query: 1  EMGEKIRHI 9
          E GE I HI
Sbjct: 64 EYGENILHI 72


>sp|PG189_VAR67|ANKYRIN repeat protein OPG189|Variola virus (isolate

Query: 1  EMGEKIRHI 9
          E GE I HI
Sbjct: 64 EYGENILHI 72


>sp|PG189_MONPV|ANKYRIN repeat protein OPG189|Monkeypox virus (MPXV)

Query: 1  EMGEKIRHI 9
          E GE I HI
Sbjct: 67 EYGENILHI 75


>sp|VE6_HPV70|PROTEIN E6|Human papillomavirus type 70

Query: 3   GEKIRHI 9
            EK+RH+
Sbjct: 115 AEKLRHV 121


>sp|NEC1_HHV7J|NUCLEAR egress protein 1|Human herpesvirus 7 (strain JI)

Query: 4   EKIRHIL 10
           EK++HIL
Sbjct: 250 EKLKHIL 256


>sp|PG181_VARV|PROTEIN OPG181|Variola virus

Query: 3  GEKIRHI 9
          GE+I HI
Sbjct: 16 GEEINHI 22


>sp|PG181_VAR67|PROTEIN OPG181|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3  GEKIRHI 9
          GE+I HI
Sbjct: 16 GEEINHI 22


>sp|PG181_VACCC|PROTEIN OPG181|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3  GEKIRHI 9
          GE+I HI
Sbjct: 16 GEEINHI 22


>sp|PG181_VACCA|PROTEIN OPG181|Vaccinia virus (strain Ankara) (VACV)

Query: 3  GEKIRHI 9
          GE+I HI
Sbjct: 16 GEEINHI 22


>sp|PG181_MONPV|PROTEIN OPG181|Monkeypox virus (MPXV)

Query: 3  GEKIRHI 9
          GE+I HI
Sbjct: 16 GEEINHI 22


>sp|ORF23_HHV8P|PROTEIN ORF23|Human herpesvirus 8 type P

Query: 3  GEKIRHIL 10
          GE++ H+L
Sbjct: 21 GERVFHVL 28


>sp|VE6_HPVME|PROTEIN E6|Human papillomavirus type ME180

Query: 3   GEKIRHI 9
            EK+RH+
Sbjct: 115 AEKLRHL 121


>sp|VE6_HPV39|PROTEIN E6|Human papillomavirus 39

Query: 3   GEKIRHI 9
            EK+RH+
Sbjct: 115 AEKLRHL 121


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 2   MGEKIRH 8
           +G+KI+H
Sbjct: 936 IGKKIKH 942


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 2   MGEKIRH 8
           +G+KI+H
Sbjct: 936 IGKKIKH 942


>sp|VE6_HPV68|PROTEIN E6|Human papillomavirus 68

Query: 3   GEKIRHI 9
            EK+RH+
Sbjct: 115 AEKLRHL 121


>sp|VE6_HPV43|PROTEIN E6|Human papillomavirus 43

Query: 4   EKIRHIL 10
           EK++HI+
Sbjct: 115 EKVQHIV 121


>sp|VE7_HPV15|PROTEIN E7|Human papillomavirus 15

Query: 4  EKIRHI 9
          EK+RH+
Sbjct: 88 EKLRHV 93


>sp|VE6_HPV18|PROTEIN E6|Human papillomavirus type 18

Query: 3   GEKIRHI 9
            EK+RH+
Sbjct: 115 AEKLRHL 121


>sp|VPU_HV1YF|PROTEIN Vpu|Human immunodeficiency virus type 1

Query: 1  EMGEKIRHI 9
          ++ EKI+HI
Sbjct: 31 KLQEKIKHI 39




147|SequenceR|740|731|RLNPIEMGEK

>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)

Query: 1   RLNPIEMGE 9
           R NP  +GE
Sbjct: 511 RTNPTPVGE 519


>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   NPIEMGE 9
           NP+E+G+
Sbjct: 387 NPMEVGD 393


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2    LNPIEMGE 9
            L PIE+G+
Sbjct: 1376 LQPIEVGK 1383


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2    LNPIEMGE 9
            L PIE+G+
Sbjct: 1376 LQPIEVGK 1383


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2    LNPIEMGE 9
            L PIE+G+
Sbjct: 1376 LQPIEVGK 1383


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2    LNPIEMGE 9
            L PIE+G+
Sbjct: 1376 LQPIEVGK 1383


>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   RLNPIEMGEK 10
           +LN +++G+K
Sbjct: 356 KLNTLKLGDK 365


>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)

Query: 1   RLNPIEMGEK 10
           +LN +++G+K
Sbjct: 356 KLNTLKLGDK 365




148|SequenceR|745|736|KVLSDRLNPI

>sp|SPIKE_ADE1A|FIBER protein|Human adenovirus B serotype 11

Query: 3  LSDRLNPI 10
          LSD  NP+
Sbjct: 7  LSDSFNPV 14


>sp|SPIKE_ADE07|FIBER protein|Human adenovirus B serotype 7

Query: 3  LSDRLNPI 10
          LSD  NP+
Sbjct: 25 LSDSFNPV 32


>sp|SPIKE_ADE1P|FIBER protein|Human adenovirus B serotype 11

Query: 3  LSDRLNPI 10
          LSD  NP+
Sbjct: 7  LSDSFNPV 14




149|SequenceR|750|741|YDQLIKVLSD

>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   YDQLIKVLSD 10
           YD LIK+ ++
Sbjct: 339 YDTLIKIATE 348


>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)

Query: 2   DQLIKVLSD 10
           + +IK+LSD
Sbjct: 165 ESMIKILSD 173


>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)

Query: 2   DQLIKVLSD 10
           + +IK+LSD
Sbjct: 165 ESMIKILSD 173


>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /

Query: 2   DQLIKVLSD 10
           + +IK+LSD
Sbjct: 165 ESMIKILSD 173


>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus

Query: 1   YDQLIKVLS 9
           YD+LIK L+
Sbjct: 205 YDELIKELT 213


>sp|MCEL_VAR67|MRNA-CAPPING enzyme catalytic subunit|Variola virus (isolate

Query: 1   YDQLIKVLS 9
           YD+LIK L+
Sbjct: 205 YDELIKELT 213


>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)

Query: 2   DQLIKVLSD 10
           + +IK+LSD
Sbjct: 165 ESMIKILSD 173


>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)

Query: 1   YDQLIKVLS 9
           YD+LIK L+
Sbjct: 205 YDELIKELT 213


>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)

Query: 1   YDQLIKVLS 9
           YD+LIK L+
Sbjct: 205 YDELIKELT 213


>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)

Query: 1   YDQLIKVLS 9
           YD+LIK L+
Sbjct: 205 YDELIKELT 213


>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)

Query: 1   YDQLIKVLSD 10
           +DQ+IK +++
Sbjct: 965 FDQIIKAVTN 974


>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   YDQLIKVLS 9
           YD+LIK L+
Sbjct: 205 YDELIKELT 213


>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 1   YDQLIKVLS 9
           YD+LIK L+
Sbjct: 205 YDELIKELT 213


>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /

Query: 1   YDQLIKVLS 9
           YD+LIK L+
Sbjct: 205 YDELIKELT 213


>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain

Query: 1   YDQLIKVLSD 10
           +DQ+IK +++
Sbjct: 965 FDQIIKAVTN 974


>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka

Query: 2   DQLIKVLSD 10
           +QL  VLSD
Sbjct: 271 EQLYHVLSD 279


>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain

Query: 2   DQLIKVLSD 10
           +QL  VLSD
Sbjct: 271 EQLYHVLSD 279




150|SequenceR|755|746|LIQLNYDQLI

>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 3   QLNYDQL 9
           +L+YDQL
Sbjct: 252 RLSYDQL 258


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 3   QLNYDQL 9
           +L YDQL
Sbjct: 251 RLTYDQL 257


>sp|VE4_HPV47|PROTEIN E4|Human papillomavirus 47

Query: 5   NYDQLI 10
           N+DQL+
Sbjct: 207 NFDQLV 212


>sp|NEC1_EBVB9|NUCLEAR egress protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4   LNYDQLI 10
           +NY QLI
Sbjct: 307 INYTQLI 313


>sp|NEC1_EBVA8|NUCLEAR egress protein 1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4   LNYDQLI 10
           +NY QLI
Sbjct: 307 INYTQLI 313


>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 1    LIQLNYDQ 8
            LIQ +YDQ
Sbjct: 1031 LIQGHYDQ 1038


>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate

Query: 4   LNYDQLI 10
           L+YDQL+
Sbjct: 212 LSYDQLL 218


>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 4   LNYDQLI 10
           L+YDQL+
Sbjct: 216 LSYDQLL 222




151|SequenceR|760|751|CGERLLIQLN

>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1    CGERLLIQ 8
            C ER L+Q
Sbjct: 2169 CSERFLVQ 2176


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 1    CGERLLIQ 8
            C ER L+Q
Sbjct: 2169 CSERFLVQ 2176


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 1    CGERLLIQ 8
            C ER L+Q
Sbjct: 2172 CEERFLVQ 2179


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 1    CGERLLIQ 8
            C ER L+Q
Sbjct: 2172 CEERFLVQ 2179


>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human

Query: 3  ERLLIQL 9
          ERL+IQL
Sbjct: 43 ERLMIQL 49


>sp|VL3_HPV5B|PROBABLE protein L3|Human papillomavirus type 5b

Query: 1  CGERLLIQ 8
          CG RL+++
Sbjct: 70 CGTRLMVK 77


>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 1   CGERLLIQLN 10
           CG  + +QLN
Sbjct: 135 CGFHIQVQLN 144


>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3  ERLLIQLN 10
          ERLL +LN
Sbjct: 6  ERLLDELN 13




152|SequenceR|765|756|VLIKKCGERL

>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2  LIKKCGER 9
          ++KKCGE+
Sbjct: 37 ILKKCGEK 44


>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)

Query: 2  LIKKCGER 9
          ++KKCGE+
Sbjct: 37 ILKKCGEK 44


>sp|UL34_HCMVT|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 2   LIKKCGER 9
           L K+CGE+
Sbjct: 159 LTKRCGEK 166


>sp|UL34_HCMVM|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   LIKKCGER 9
           L K+CGE+
Sbjct: 159 LTKRCGEK 166


>sp|UL34_HCMVA|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   LIKKCGER 9
           L K+CGE+
Sbjct: 159 LTKRCGEK 166


>sp|E1BS_ADE05|E1B protein, small T-antigen|Human adenovirus C serotype 5

Query: 2  LIKKCGE 8
          L+K CGE
Sbjct: 54 LLKSCGE 60


>sp|E1BS_ADE02|E1B protein, small T-antigen|Human adenovirus C serotype 2

Query: 2  LIKKCGE 8
          L+K CGE
Sbjct: 54 LLKSCGE 60


>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)

Query: 1   VLIKKCGE 8
           VL+ +CGE
Sbjct: 128 VLVGECGE 135


>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   VLIKKCGE 8
           VL+ +CGE
Sbjct: 128 VLVGECGE 135


>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   VLIKKCGER 9
           +LI+ CG R
Sbjct: 545 ILIEICGHR 553


>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   VLIKKCGER 9
           VLI+ CG++
Sbjct: 545 VLIEICGQK 553


>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1    VLIKKCGERL 10
            VLI  CG +L
Sbjct: 1568 VLIAGCGLKL 1577


>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1    VLIKKCGERL 10
            VLI  CG +L
Sbjct: 1568 VLIAGCGLKL 1577


>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1    VLIKKCGERL 10
            VLI  CG +L
Sbjct: 1568 VLIAGCGLKL 1577


>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4

Query: 1    VLIKKCGERL 10
            VLI  CG +L
Sbjct: 1582 VLIAGCGLKL 1591


>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1    VLIKKCGERL 10
            VLI  CG +L
Sbjct: 1568 VLIAGCGLKL 1577


>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1    VLIKKCGERL 10
            VLI  CG +L
Sbjct: 1568 VLIAGCGLKL 1577


>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 6   CGERL 10
           CGER+
Sbjct: 160 CGERM 164


>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 6   CGERL 10
           CGER+
Sbjct: 160 CGERM 164


>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 6   CGERL 10
           CGER+
Sbjct: 160 CGERM 164


>sp|PG181_VACCC|PROTEIN OPG181|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2  LIKKCGERL 10
          +IK C ER+
Sbjct: 27 MIKPCCERV 35


>sp|UL88_HHV6Z|PROTEIN U59|Human herpesvirus 6B (strain Z29)

Query: 5  KCGERL 10
          +CGER+
Sbjct: 88 ECGERI 93


>sp|PG181_MONPV|PROTEIN OPG181|Monkeypox virus (MPXV)

Query: 2  LIKKCGERL 10
          +IK C ER+
Sbjct: 27 MIKPCCERV 35


>sp|PG181_VARV|PROTEIN OPG181|Variola virus

Query: 2  LIKKCGERL 10
          +IK C ER+
Sbjct: 27 MIKPCCERV 35


>sp|PG181_VAR67|PROTEIN OPG181|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2  LIKKCGERL 10
          +IK C ER+
Sbjct: 27 MIKPCCERV 35


>sp|UL88_HHV6U|PROTEIN U59|Human herpesvirus 6A (strain Uganda-1102)

Query: 5  KCGERL 10
          +CGER+
Sbjct: 88 ECGERI 93


>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   VLIKKCGER 9
           +LI+ CG++
Sbjct: 543 ILIEICGKK 551


>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   VLIKKCGER 9
           +LI+ CG++
Sbjct: 555 ILIEICGKK 563


>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1   VLIKKCGER 9
           +LI+ CG++
Sbjct: 546 ILIEICGKK 554


>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)

Query: 4   KKCGERL 10
           K CG+R+
Sbjct: 213 KHCGKRI 219




153|SequenceR|770|761|SLSDAVLIKK

>sp|CCU83_HHV6U|PUTATIVE CC-type chemokine U83|Human herpesvirus 6A (strain Uganda-1102)

Query: 2  LSDAVLIKK 10
          L DA++IKK
Sbjct: 50 LFDAIMIKK 58


>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 2    LSDAVLIK 9
            LSD+ L+K
Sbjct: 1096 LSDSTLVK 1103




154|SequenceR|775|766|MKKLLSLSDA

>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   MKKLLSLSDA 10
           +KK+ S+SDA
Sbjct: 342 LKKIQSVSDA 351


>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   MKKLLSLSDA 10
           +KK+ S+SDA
Sbjct: 342 LKKIQSVSDA 351


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 2   KKLLSLSDA 10
           K+LLSL++A
Sbjct: 944 KRLLSLAEA 952


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 2   KKLLSLSDA 10
           K+LLSL++A
Sbjct: 939 KRLLSLAEA 947


>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)

Query: 2   KKLLSLSDA 10
           K+LLSL++A
Sbjct: 966 KRLLSLAEA 974


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 1    MKKLLSLS 8
            +KKL SLS
Sbjct: 3031 LKKLASLS 3038




155|SequenceR|780|771|MQTRHMKKLL

>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 1   MQTRHMK 7
           MQTRH+K
Sbjct: 616 MQTRHVK 622


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 1   MQTRHMK 7
           MQTRH+K
Sbjct: 617 MQTRHVK 623


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 1   MQTRHMK 7
           MQTRH+K
Sbjct: 617 MQTRHVK 623


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 1   MQTRHMK 7
           MQTRH+K
Sbjct: 617 MQTRHVK 623


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 1   MQTRHMK 7
           MQTRH+K
Sbjct: 616 MQTRHVK 622


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 1   MQTRHMK 7
           MQTRH+K
Sbjct: 616 MQTRHVK 622


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 1   MQTRHMK 7
           MQTRH+K
Sbjct: 618 MQTRHVK 624


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 1   MQTRHMK 7
           MQTRH+K
Sbjct: 618 MQTRHVK 624


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 1   MQTRHMK 7
           MQTRH+K
Sbjct: 618 MQTRHVK 624


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 1   MQTRHMK 7
           MQTRH+K
Sbjct: 616 MQTRHVK 622


>sp|VCYCL_HHV8P|VIRAL cyclin homolog|Human herpesvirus 8 type P

Query: 3  TRHMKKLL 10
          T HM+KLL
Sbjct: 47 TSHMRKLL 54


>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)

Query: 1   MQTRHMK 7
           +QTRH+K
Sbjct: 618 IQTRHVK 624


>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)

Query: 1   MQTRHM 6
           MQTRH+
Sbjct: 616 MQTRHV 621


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 1   MQTRHM 6
           MQTRH+
Sbjct: 617 MQTRHV 622


>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /

Query: 1   MQTRHM 6
           MQTRH+
Sbjct: 616 MQTRHV 621


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 1   MQTRHM 6
           MQTRH+
Sbjct: 616 MQTRHV 621


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 1   MQTRHM 6
           MQTRH+
Sbjct: 619 MQTRHV 624


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 1   MQTRHMKKL 9
           +QTRH++  
Sbjct: 616 IQTRHVRNF 624


>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1   MQTRHMKKLL 10
           ++TRH+ KL+
Sbjct: 885 IKTRHICKLI 894


>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1   MQTRHMKKLL 10
           ++TRH+ KL+
Sbjct: 883 IKTRHICKLI 892


>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1   MQTRHMKKLL 10
           ++TRH+ KL+
Sbjct: 884 IKTRHICKLI 893


>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)

Query: 3  TRHMKKL 9
          T H+KKL
Sbjct: 62 TAHLKKL 68


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 3  TRHMKKL 9
          T H+KKL
Sbjct: 62 TAHLKKL 68




156|SequenceR|785|776|VLVGKMQTRH

>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 1   VLVGKMQT 8
           V++G+MQT
Sbjct: 237 VIIGRMQT 244


>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 1   VLVGKMQT 8
           V++G+MQT
Sbjct: 237 VIIGRMQT 244


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1   VLVGKMQT 8
           V++G+MQT
Sbjct: 237 VIIGRMQT 244


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1   VLVGKMQT 8
           V++G+MQT
Sbjct: 237 VIIGRMQT 244


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1   VLVGKMQT 8
           V++G+MQT
Sbjct: 237 VIIGRMQT 244


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1   VLVGKMQT 8
           V++G+MQT
Sbjct: 237 VIIGRMQT 244


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 1   VLVGKMQT 8
           V++G+MQT
Sbjct: 227 VIIGRMQT 234


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1   VLVGKMQT 8
           V++G+MQT
Sbjct: 237 VIIGRMQT 244


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 1   VLVGKMQT 8
           V++G+MQT
Sbjct: 226 VVIGRMQT 233


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 1    VLVGKMQTR 9
            VL+G+M+ R
Sbjct: 2768 VLIGRMEKR 2776




157|SequenceR|790|781|INEEDVLVGK

>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 2    NEEDVLVG 9
            N+EDV+ G
Sbjct: 1026 NDEDVVTG 1033


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 2    NEEDVLVG 9
            N+EDV+ G
Sbjct: 1026 NDEDVVTG 1033


>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)

Query: 2    NEEDVLVG 9
            NE DVLV 
Sbjct: 2099 NENDVLVA 2106


>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)

Query: 2    NEEDVLVG 9
            NE DVLV 
Sbjct: 2128 NENDVLVA 2135


>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)

Query: 2   NEEDVLVG 9
           N+ED +VG
Sbjct: 867 NQEDYVVG 874


>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)

Query: 2   NEEDVLVG 9
           N+ED +VG
Sbjct: 867 NQEDYVVG 874


>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)

Query: 2   NEEDVLVG 9
           N+E++L+G
Sbjct: 342 NDEEILIG 349


>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann

Query: 2   NEEDVLVG 9
           N+E++L+G
Sbjct: 342 NDEEILIG 349


>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann

Query: 2   NEEDVLVG 9
           N+E++L+G
Sbjct: 342 NDEEILIG 349


>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)

Query: 2   NEEDVLVG 9
           N+E++L+G
Sbjct: 342 NDEEILIG 349


>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2   NEEDVLV 8
           N+ED+LV
Sbjct: 176 NQEDLLV 182


>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong

Query: 2   NEEDVLV 8
           N+ED+LV
Sbjct: 184 NQEDLLV 190


>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2   NEEDVLV 8
           N+ED+LV
Sbjct: 184 NQEDLLV 190


>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996

Query: 2   NEEDVLV 8
           N+ED+LV
Sbjct: 184 NQEDLLV 190


>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2   NEEDVLV 8
           N+ED+LV
Sbjct: 173 NQEDLLV 179


>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky

Query: 2   NEEDVLV 8
           N+ED+LV
Sbjct: 173 NQEDLLV 179


>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003

Query: 2   NEEDVLV 8
           N+ED+LV
Sbjct: 184 NQEDLLV 190


>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2   NEEDVLV 8
           N+ED+LV
Sbjct: 173 NQEDLLV 179


>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2   NEEDVLV 8
           N+ED+LV
Sbjct: 173 NQEDLLV 179


>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002

Query: 2   NEEDVLV 8
           N+ED+LV
Sbjct: 180 NQEDLLV 186


>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2   NEEDVLV 8
           N+ED+LV
Sbjct: 184 NQEDLLV 190


>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005

Query: 2   NEEDVLV 8
           N+ED+LV
Sbjct: 184 NQEDLLV 190


>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong

Query: 2   NEEDVLV 8
           N+ED+LV
Sbjct: 184 NQEDLLV 190




158|SequenceR|795|786|LCSECINEED

>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 2    CSECINEE 9
            C EC+N++
Sbjct: 1150 CPECLNKK 1157


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 2    CSECINEE 9
            C EC+N++
Sbjct: 1150 CPECLNKK 1157


>sp|HEMA_INBVM|HEMAGGLUTININ B virus (strain B/Victoria/19/1989)

Query: 1  LCSECINEED 10
          LC +C+N  D
Sbjct: 68 LCPKCLNCTD 77


>sp|HEMA_INBP3|HEMAGGLUTININ B virus (strain B/Paris/329/1990)

Query: 1  LCSECINEED 10
          LC +C+N  D
Sbjct: 68 LCPKCLNCTD 77


>sp|HEMA_INBNA|HEMAGGLUTININ B virus (strain B/Nagasaki/1/1987)

Query: 1  LCSECINEED 10
          LC +C+N  D
Sbjct: 53 LCPKCLNCTD 62


>sp|HEMA_INBIN|HEMAGGLUTININ B virus (strain B/India/3/1989)

Query: 1  LCSECINEED 10
          LC +C+N  D
Sbjct: 68 LCPKCLNCTD 77


>sp|HEMA_INB|HEMAGGLUTININ B virus (strain B/ID/1986)

Query: 1  LCSECINEED 10
          LC +C+N  D
Sbjct: 65 LCPKCLNCTD 74


>sp|HEMA_INBIB|HEMAGGLUTININ B virus (strain B/Ibaraki/2/1985)

Query: 1  LCSECINEED 10
          LC +C+N  D
Sbjct: 53 LCPKCLNCTD 62


>sp|HEMA_INBF9|HEMAGGLUTININ B virus (strain B/Finland/151/1990)

Query: 1  LCSECINEED 10
          LC +C+N  D
Sbjct: 53 LCPKCLNCTD 62


>sp|HEMA_INBF8|HEMAGGLUTININ B virus (strain B/Finland/150/1990)

Query: 1  LCSECINEED 10
          LC +C+N  D
Sbjct: 53 LCPKCLNCTD 62


>sp|HEMA_INBF7|HEMAGGLUTININ B virus (strain B/Finland/149/1990)

Query: 1  LCSECINEED 10
          LC +C+N  D
Sbjct: 53 LCPKCLNCTD 62


>sp|HEMA_INBF6|HEMAGGLUTININ B virus (strain B/Finland/148/1990)

Query: 1  LCSECINEED 10
          LC +C+N  D
Sbjct: 53 LCPKCLNCTD 62


>sp|HEMA_INBF5|HEMAGGLUTININ B virus (strain B/Finland/147/1990)

Query: 1  LCSECINEED 10
          LC +C+N  D
Sbjct: 53 LCPKCLNCTD 62


>sp|HEMA_INBF4|HEMAGGLUTININ B virus (strain B/Finland/146/1990)

Query: 1  LCSECINEED 10
          LC +C+N  D
Sbjct: 53 LCPKCLNCTD 62


>sp|HEMA_INBF3|HEMAGGLUTININ B virus (strain B/Finland/145/1990)

Query: 1  LCSECINEED 10
          LC +C+N  D
Sbjct: 53 LCPKCLNCTD 62


>sp|HEMA_INBF2|HEMAGGLUTININ B virus (strain B/Finland/56/1988)

Query: 1  LCSECINEED 10
          LC +C+N  D
Sbjct: 53 LCPKCLNCTD 62


>sp|HEMA_INBF1|HEMAGGLUTININ B virus (strain B/Finland/24/1985)

Query: 1  LCSECINEED 10
          LC +C+N  D
Sbjct: 53 LCPKCLNCTD 62


>sp|HEMA_INBAA|HEMAGGLUTININ B virus (strain B/Ann

Query: 1  LCSECINEED 10
          LC +C+N  D
Sbjct: 60 LCPKCLNCTD 69


>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)

Query: 2   CSECINE 8
           C EC NE
Sbjct: 493 CHECQNE 499


>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)

Query: 2   CSECINE 8
           C EC NE
Sbjct: 493 CHECQNE 499


>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)

Query: 1   LCSECIN 7
           LC  CIN
Sbjct: 614 LCPHCIN 620


>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)

Query: 1  LCSECINEED 10
          LC +C+N  D
Sbjct: 61 LCPKCLNCTD 70


>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)

Query: 1  LCSECINEED 10
          LC +C+N  D
Sbjct: 61 LCPKCLNCTD 70


>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)

Query: 1  LCSECINEED 10
          LC +C+N  D
Sbjct: 68 LCPKCLNCTD 77


>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)

Query: 1  LCSECINEED 10
          LC +C+N  D
Sbjct: 68 LCPKCLNCTD 77


>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)

Query: 1   LCSECIN 7
           LC  CIN
Sbjct: 614 LCPHCIN 620


>sp|HEMA_INBYB|HEMAGGLUTININ B virus (strain B/Yamagata/16/1988)

Query: 1  LCSECINEED 10
          LC  C+N  D
Sbjct: 53 LCPNCLNCTD 62


>sp|HEMA_INBVL|HEMAGGLUTININ B virus (strain B/Victoria/103/1989)

Query: 1  LCSECINEED 10
          LC  C+N  D
Sbjct: 68 LCPNCLNCTD 77


>sp|HEMA_INBTF|HEMAGGLUTININ B virus (strain B/Texas/4/1990)

Query: 1  LCSECINEED 10
          LC  C+N  D
Sbjct: 68 LCPNCLNCTD 77


>sp|HEMA_INBTE|HEMAGGLUTININ B virus (strain B/Texas/1/1991)

Query: 1  LCSECINEED 10
          LC  C+N  D
Sbjct: 68 LCPNCLNCTD 77


>sp|HEMA_INBSJ|HEMAGGLUTININ B virus (strain B/Singapore/1964)

Query: 1  LCSECINEED 10
          LC  C+N  D
Sbjct: 64 LCPNCLNCTD 73


>sp|HEMA_INBSD|HEMAGGLUTININ B virus (strain B/South

Query: 1  LCSECINEED 10
          LC  C+N  D
Sbjct: 68 LCPNCLNCTD 77


>sp|HEMA_INBP9|HEMAGGLUTININ B virus (strain B/Panama/45/1990)

Query: 1  LCSECINEED 10
          LC  C+N  D
Sbjct: 68 LCPNCLNCTD 77


>sp|HEMA_INBNY|HEMAGGLUTININ B virus (strain B/New

Query: 1  LCSECINEED 10
          LC  C+N  D
Sbjct: 68 LCPNCLNCTD 77


>sp|HEMA_INBHM|HEMAGGLUTININ B virus (strain B/Hong

Query: 1  LCSECINEED 10
          LC  C+N  D
Sbjct: 68 LCPNCLNCTD 77


>sp|HEMA_INBHL|HEMAGGLUTININ B virus (strain B/Hong

Query: 1  LCSECINEED 10
          LC  C+N  D
Sbjct: 68 LCPNCLNCTD 77


>sp|HEMA_INBGL|HEMAGGLUTININ B virus (strain B/GL/1954)

Query: 1  LCSECINEED 10
          LC  C+N  D
Sbjct: 64 LCPNCLNCTD 73


>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)

Query: 1  LCSECINEED 10
          LC  C+N  D
Sbjct: 68 LCPNCLNCTD 77


>sp|HEMA_INBFU|HEMAGGLUTININ B virus (strain B/Fukuoka/80/1981)

Query: 1  LCSECINEED 10
          LC  C+N  D
Sbjct: 53 LCPNCLNCTD 62


>sp|HEMA_INBBK|HEMAGGLUTININ B virus (strain B/Bangkok/163/1990)

Query: 1  LCSECINEED 10
          LC  C+N  D
Sbjct: 68 LCPNCLNCTD 77


>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1

Query: 1   LCSECINEED 10
           L + C+ EED
Sbjct: 608 LTTACVPEED 617


>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)

Query: 1  LCSECINEED 10
          LC  C+N  D
Sbjct: 68 LCPNCLNCTD 77


>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)

Query: 1  LCSECINEED 10
          LC  C+N  D
Sbjct: 68 LCPNCLNCTD 77


>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)

Query: 1  LCSECINEED 10
          LC  C+N  D
Sbjct: 68 LCPNCLNCTD 77


>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)

Query: 1  LCSECINEED 10
          LC  C+N  D
Sbjct: 61 LCPNCLNCTD 70


>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong

Query: 1  LCSECINEED 10
          LC  C+N  D
Sbjct: 61 LCPNCLNCTD 70


>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)

Query: 1  LCSECINEED 10
          LC  C+N  D
Sbjct: 58 LCPNCLNCTD 67


>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 2   CSECINEE 9
           CS+C +EE
Sbjct: 450 CSQCCHEE 457


>sp|NEF_HV2CA|PROTEIN Nef|Human immunodeficiency virus type 2

Query: 2  CSECIN 7
          C EC N
Sbjct: 28 CGECYN 33


>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)

Query: 1  LCSECINEED 10
          LC  C N  D
Sbjct: 61 LCPNCFNCTD 70


>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus

Query: 1   LCSECINEE 9
           LCS  +N E
Sbjct: 230 LCSYIVNNE 238


>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)

Query: 1   LCSECINEE 9
           LCS  +N E
Sbjct: 230 LCSYIVNNE 238


>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)

Query: 1  LCSECINEED 10
          LC  C N  D
Sbjct: 68 LCPNCFNCTD 77


>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   LCSECINEE 9
           LCS  +N E
Sbjct: 230 LCSYIVNNE 238


>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)

Query: 1   LCSECINEE 9
           LCS  +N E
Sbjct: 230 LCSYIVNNE 238


>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P

Query: 1   LCSECINE 8
           +C+ C N+
Sbjct: 299 MCATCFNK 306


>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   LCSECINE 8
           +C+ C N+
Sbjct: 304 MCATCFNK 311


>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   LCSECINE 8
           +C+ C N+
Sbjct: 304 MCATCFNK 311


>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   LCSECINE 8
           +C+ C N+
Sbjct: 304 MCATCFNK 311


>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)

Query: 1   LCSECINEE 9
           LCS  +N E
Sbjct: 230 LCSYIVNNE 238


>sp|NTP1_YMTV5|NUCLEOSIDE triphosphatase I|Yaba monkey tumor virus (strain

Query: 1   LCSECINEE 9
           +CS  +N+E
Sbjct: 230 ICSYIVNDE 238


>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain

Query: 2   CSECI 6
           CS+C+
Sbjct: 232 CSDCV 236


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1    LCSECINEED 10
            L +ECI E D
Sbjct: 2187 LETECIKEND 2196


>sp|IR12_HCMVA|UNCHARACTERIZED protein IRL12|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   LCSECINEE 9
           LC  C N E
Sbjct: 271 LCRSCNNTE 279




159|SequenceR|800|791|PLIPSLCSEC

>sp|V_PI2HT|NON-STRUCTURAL protein V|Human parainfluenza 2 virus (strain

Query: 4   PSLCSEC 10
           PS+C EC
Sbjct: 215 PSICGEC 221


>sp|V_PI2H|NON-STRUCTURAL protein V|Human parainfluenza 2 virus (HPIV-2)

Query: 4   PSLCSEC 10
           PS+C EC
Sbjct: 215 PSICGEC 221


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 4    PSLCSEC 10
            P LC++C
Sbjct: 5018 PMLCTKC 5024


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 4    PSLCSEC 10
            P LC++C
Sbjct: 4993 PMLCTKC 4999


>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)

Query: 2   LIPSLC 7
           L+PSLC
Sbjct: 445 LLPSLC 450


>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)

Query: 2  LIPSLC 7
          LIPSLC
Sbjct: 12 LIPSLC 17


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 2    LIPSLCSE 9
            LIP  CS+
Sbjct: 1488 LIPDACSK 1495


>sp|VP1_POVKI|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 350)

Query: 1   PLIPSLCSEC 10
           P IP+  SEC
Sbjct: 112 PDIPNQVSEC 121


>sp|VP1_POVK6|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 60)

Query: 1   PLIPSLCSEC 10
           P IP+  SEC
Sbjct: 112 PDIPNQVSEC 121


>sp|VP1_POVK3|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 380)

Query: 1   PLIPSLCSEC 10
           P IP+  SEC
Sbjct: 112 PDIPNQVSEC 121


>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26

Query: 3   IPSLCSE 9
           +PS+CS+
Sbjct: 156 LPSVCSQ 162


>sp|VP1_POVWU|MAJOR capsid protein VP1|WU polyomavirus (WUPyV)

Query: 1   PLIPSLCSEC 10
           P IP+  SEC
Sbjct: 103 PDIPNQVSEC 112


>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New

Query: 3  IPSLCSE 9
          IP +CS+
Sbjct: 56 IPKICSK 62


>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao

Query: 3  IPSLCSE 9
          IP +CS+
Sbjct: 56 IPKICSK 62


>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973

Query: 3  IPSLCSE 9
          IP +CS+
Sbjct: 56 IPKICSK 62


>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973

Query: 3  IPSLCSE 9
          IP +CS+
Sbjct: 56 IPKICSK 62


>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972

Query: 3  IPSLCSE 9
          IP +CS+
Sbjct: 56 IPKICSK 62


>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966

Query: 3  IPSLCSE 9
          IP +CS+
Sbjct: 56 IPKICSK 62


>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964

Query: 3  IPSLCSE 9
          IP +CS+
Sbjct: 56 IPKICSK 62


>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964

Query: 3  IPSLCSE 9
          IP +CS+
Sbjct: 56 IPKICSK 62


>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963

Query: 3  IPSLCSE 9
          IP +CS+
Sbjct: 56 IPKICSK 62


>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956

Query: 3  IPSLCSE 9
          IP +CS+
Sbjct: 56 IPKICSK 62


>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge

Query: 3  IPSLCSE 9
          IP +CS+
Sbjct: 56 IPKICSK 62


>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)

Query: 2   LIPSLCSEC 10
           L+P+  S C
Sbjct: 275 LVPAYASRC 283


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 2   LIPSLCSEC 10
           L+P+  S C
Sbjct: 275 LVPAYASRC 283


>sp|VE5_HPV18|PROBABLE protein E5|Human papillomavirus type 18

Query: 1  PLIPSLC 7
          PL+PS+C
Sbjct: 21 PLLPSVC 27


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 1   PLIPSL 6
           PL+PS+
Sbjct: 479 PLVPSM 484


>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)

Query: 2    LIPSLCSEC 10
            L  SLC +C
Sbjct: 1022 LCASLCQQC 1030


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 5    SLCSEC 10
            SLC +C
Sbjct: 1366 SLCKDC 1371




160|SequenceR|805|796|KAADSPLIPS

>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931

Query: 1   KAADSPLIPS 10
           + A SP++PS
Sbjct: 469 EKATSPIVPS 478


>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954

Query: 1   KAADSPLIPS 10
           + A SP++PS
Sbjct: 469 EKATSPIVPS 478


>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949

Query: 1   KAADSPLIPS 10
           + A SP++PS
Sbjct: 469 EKATSPIVPS 478


>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946

Query: 1   KAADSPLIPS 10
           + A SP++PS
Sbjct: 469 EKATSPIVPS 478


>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942

Query: 1   KAADSPLIPS 10
           + A SP++PS
Sbjct: 469 EKATSPIVPS 478


>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937

Query: 1   KAADSPLIPS 10
           + A SP++PS
Sbjct: 469 EKATSPIVPS 478


>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935

Query: 1   KAADSPLIPS 10
           + A SP++PS
Sbjct: 469 EKATSPIVPS 478


>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930

Query: 1   KAADSPLIPS 10
           + A SP++PS
Sbjct: 469 EKATSPIVPS 478


>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig

Query: 1   KAADSPLIPS 10
           + A SP++PS
Sbjct: 469 EKATSPIVPS 478


>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954

Query: 1   KAADSPLIPS 10
           + A SP++PS
Sbjct: 469 EKAASPIVPS 478


>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936

Query: 1   KAADSPLIPS 10
           + A SP++PS
Sbjct: 469 EKAASPIVPS 478


>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935

Query: 1   KAADSPLIPS 10
           + A SP++PS
Sbjct: 469 EKAASPIVPS 478


>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto

Query: 1   KAADSPLIPS 10
           + A SP++PS
Sbjct: 469 EKAASPIVPS 478


>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006

Query: 1   KAADSPLIPS 10
           + A SP++PS
Sbjct: 469 EKAASPIVPS 478


>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935

Query: 1   KAADSPLIPS 10
           + A SP++PS
Sbjct: 469 EKAASPIVPS 478


>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933

Query: 1   KAADSPLIPS 10
           + A SP++PS
Sbjct: 469 EKAASPIVPS 478


>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2

Query: 3   ADSPLIPS 10
           ADSP +PS
Sbjct: 817 ADSPSVPS 824


>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2

Query: 3   ADSPLIPS 10
           ADSP +PS
Sbjct: 817 ADSPSVPS 824


>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C

Query: 3   ADSPLIPS 10
           ADSP +PS
Sbjct: 817 ADSPSVPS 824


>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D

Query: 3   ADSPLIPS 10
           ADSP +PS
Sbjct: 806 ADSPSVPS 813


>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2

Query: 3   ADSPLIPS 10
           ADSP +PS
Sbjct: 817 ADSPSVPS 824


>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C

Query: 3   ADSPLIPS 10
           ADSP +PS
Sbjct: 817 ADSPSVPS 824


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 2    AADSPLIPS 10
            A+D+P +PS
Sbjct: 1991 ASDTPRVPS 1999


>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D

Query: 3   ADSPLIPS 10
           ADSP +PS
Sbjct: 806 ADSPSVPS 813


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 2    AADSPLIPS 10
            A+D+P +PS
Sbjct: 1991 ASDTPRVPS 1999


>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H

Query: 3   ADSPLIPS 10
           ADSP +PS
Sbjct: 817 ADSPPVPS 824


>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H

Query: 3   ADSPLIPS 10
           ADSP +PS
Sbjct: 817 ADSPPVPS 824


>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2

Query: 3   ADSPLIPS 10
           ADSP +PS
Sbjct: 817 ADSPSVPS 824


>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2

Query: 3   ADSPLIPS 10
           ADSP +PS
Sbjct: 817 ADSPSVPS 824


>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D

Query: 3   ADSPLIPS 10
           ADSP +PS
Sbjct: 806 ADSPSVPS 813


>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D

Query: 3   ADSPLIPS 10
           ADSP +PS
Sbjct: 806 ADSPSVPS 813


>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D

Query: 3   ADSPLIPS 10
           ADSP +PS
Sbjct: 806 ADSPSVPS 813


>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2

Query: 3   ADSPLIPS 10
           ADSP +PS
Sbjct: 817 ADSPSVPS 824


>sp|PG036_VARV|PROTEIN OPG036|Variola virus

Query: 4  DSPLIP 9
          DSP++P
Sbjct: 19 DSPILP 24


>sp|PG036_VAR67|PROTEIN OPG036|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 4  DSPLIP 9
          DSP++P
Sbjct: 19 DSPILP 24


>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2

Query: 3   ADSPLIPS 10
           ADSP +PS
Sbjct: 817 ADSPSVPS 824


>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1

Query: 3   ADSPLIPS 10
           ADSP +PS
Sbjct: 817 ADSPSVPS 824


>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1

Query: 3   ADSPLIPS 10
           ADSP +PS
Sbjct: 817 ADSPSVPS 824


>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin

Query: 2   AADSPLIPS 10
           +AD+PL+ S
Sbjct: 651 SADTPLMES 659


>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)

Query: 2   AADSPLIPS 10
           +AD+PL+ S
Sbjct: 651 SADTPLMES 659


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 2   AADSPLIPS 10
            A +PL+PS
Sbjct: 629 GATNPLVPS 637


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 2   AADSPLIPS 10
            A +PL+PS
Sbjct: 629 GATNPLVPS 637


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 2   AADSPLIPS 10
            A +PL+PS
Sbjct: 628 GATNPLVPS 636


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 2   AADSPLIPS 10
            A +PL+PS
Sbjct: 628 GATNPLVPS 636


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 2   AADSPLIPS 10
            A +PL+PS
Sbjct: 626 GATNPLVPS 634


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired

Query: 4   DSPLIP 9
           D PLIP
Sbjct: 433 DHPLIP 438


>sp|EBNA2_EBVG|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1  KAADSPLIP 9
          + +D+PLIP
Sbjct: 39 QLSDTPLIP 47


>sp|EBNA2_EBVB9|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1  KAADSPLIP 9
          + +D+PLIP
Sbjct: 39 QLSDTPLIP 47




161|SequenceR|810|801|VVSFPKAADS

>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)

Query: 3  SFPKAAD 9
          +FP++AD
Sbjct: 66 AFPRSAD 72


>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)

Query: 3  SFPKAAD 9
          +FP++AD
Sbjct: 66 AFPRSAD 72


>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)

Query: 3  SFPKAAD 9
          +FP++AD
Sbjct: 66 AFPRSAD 72


>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)

Query: 3  SFPKAAD 9
          +FP++AD
Sbjct: 72 AFPRSAD 78


>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 3  SFPKAAD 9
          +FP++AD
Sbjct: 79 AFPRSAD 85


>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)

Query: 3  SFPKAAD 9
          +FP++AD
Sbjct: 66 AFPRSAD 72


>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)

Query: 3  SFPKAAD 9
          +FP++AD
Sbjct: 72 AFPRSAD 78


>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great

Query: 3  SFPKAAD 9
          +FP++AD
Sbjct: 66 AFPRSAD 72


>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)

Query: 3  SFPKAAD 9
          +FP++AD
Sbjct: 66 AFPRSAD 72


>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)

Query: 3  SFPKAAD 9
          +FP++AD
Sbjct: 66 AFPRSAD 72


>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann

Query: 3  SFPKAAD 9
          +FP++AD
Sbjct: 79 AFPRSAD 85


>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)

Query: 1   VVSFPKAAD 9
           +  FP+AAD
Sbjct: 863 LADFPEAAD 871


>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)

Query: 1   VVSFPKAAD 9
           +  FP+AAD
Sbjct: 863 LADFPEAAD 871


>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)

Query: 1   VVSFPKAAD 9
           +  FP+AAD
Sbjct: 863 LADFPEAAD 871


>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)

Query: 1   VVSFPKAAD 9
           +  FP+AAD
Sbjct: 863 LADFPEAAD 871


>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)

Query: 3  SFPKAAD 9
          +FP++AD
Sbjct: 66 NFPRSAD 72


>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)

Query: 3  SFPKAAD 9
          +FP++AD
Sbjct: 65 NFPRSAD 71


>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)

Query: 3  SFPKAAD 9
          +FP++AD
Sbjct: 65 NFPRSAD 71


>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)

Query: 3  SFPKAAD 9
          +FP++AD
Sbjct: 65 NFPRSAD 71


>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 1    VVSFPKAA 8
            ++SFP+AA
Sbjct: 1031 LMSFPQAA 1038




162|SequenceR|815|806|RCHFVVVSFP

>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)

Query: 2    CHFVVVSFP 10
            C F+ ++FP
Sbjct: 1292 CQFLQIAFP 1300


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 2    CHFVVVSFP 10
            C ++ + FP
Sbjct: 2052 CEYICLGFP 2060


>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 2   CHFVVV 7
           CHFV++
Sbjct: 261 CHFVLL 266


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2    CHFVV 6
            CH+VV
Sbjct: 2104 CHYVV 2108


>sp|VE7_HPV16|PROTEIN E7|Human papillomavirus type 16

Query: 1  RCHFVVVSF 9
          R H+ +V+F
Sbjct: 49 RAHYNIVTF 57


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2    CHFVV 6
            CH+VV
Sbjct: 2103 CHYVV 2107




163|SequenceR|820|811|KHFMHRCHFV

>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P

Query: 2   HFMHRCHFV 10
           HF+HR  F+
Sbjct: 481 HFLHRAQFI 489


>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27

Query: 3  FMHRCH 8
          ++HRCH
Sbjct: 73 WLHRCH 78


>sp|NSS_SFTSV|NON-STRUCTURAL protein NS-S|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)

Query: 2   HFMHRCHF 9
           H+++RC F
Sbjct: 253 HYLNRCPF 260


>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)

Query: 2   HFMHRCHF 9
           H+M+ C F
Sbjct: 156 HYMYACEF 163


>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)

Query: 1   KHFMHRC 7
           KH+  RC
Sbjct: 467 KHYFERC 473


>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)

Query: 1  KHFMHRCHF 9
          KH   RC F
Sbjct: 14 KHIPDRCEF 22


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 1    KHFMHRCHF 9
            +H M +C F
Sbjct: 2027 RHLMTQCDF 2035


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 1    KHFMHRCHF 9
            +H M +C F
Sbjct: 2027 RHLMTQCDF 2035


>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)

Query: 5   HRCHFV 10
            RCHF+
Sbjct: 126 QRCHFI 131


>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)

Query: 5   HRCHFV 10
            RCHF+
Sbjct: 126 QRCHFI 131


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3    FMHRCH 8
            F+H+C+
Sbjct: 5433 FLHKCY 5438


>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate

Query: 5   HRCHFV 10
            RCHF+
Sbjct: 126 QRCHFI 131


>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)

Query: 1   KHFMHRC 7
           KH+  RC
Sbjct: 483 KHYFERC 489


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 1    KHFMHRC 7
            +H M RC
Sbjct: 2953 RHLMGRC 2959


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 1    KHFMHRC 7
            +H M RC
Sbjct: 2953 RHLMGRC 2959


>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)

Query: 5   HRCHFV 10
            RCHF+
Sbjct: 126 QRCHFI 131


>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)

Query: 5   HRCHFV 10
            RCHF+
Sbjct: 126 QRCHFI 131


>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2  HFMHRCHFV 10
          H M  C F+
Sbjct: 26 HIMQTCGFI 34


>sp|M21_HRSVA|PROTEIN M2-1|Human respiratory syncytial virus A

Query: 6  RCHF 9
          RCHF
Sbjct: 20 RCHF 23


>sp|M21_HRSV|PROTEIN M2-1|Human respiratory syncytial virus

Query: 6  RCHF 9
          RCHF
Sbjct: 20 RCHF 23


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 3    FMHRCH 8
            F+H+C+
Sbjct: 5408 FLHKCY 5413


>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)

Query: 2   HFMHRCHF 9
           HF  +C+F
Sbjct: 891 HFRKKCNF 898


>sp|VE2_HPV33|REGULATORY protein E2|Human papillomavirus 33

Query: 3  FMHRCHFV 10
          F H CH V
Sbjct: 51 FSHLCHQV 58


>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003

Query: 3   FMHRC 7
           F HRC
Sbjct: 486 FYHRC 490


>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   FMHRCHFV 10
            MH  HF+
Sbjct: 218 LMHTTHFI 225


>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P

Query: 2   HFMHRC 7
           H+ +RC
Sbjct: 392 HYFYRC 397


>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   FMHRC 7
           F+HRC
Sbjct: 150 FIHRC 154


>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)

Query: 3   FMHRC 7
           F+HRC
Sbjct: 150 FIHRC 154




164|SequenceR|825|816|MPLCEKHFMH

>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)

Query: 3   LCEKHFMH 10
           LCE+H  H
Sbjct: 131 LCEEHLKH 138


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3239 VPFCSNHF 3246


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3236 VPFCSNHF 3243


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3240 VPFCSNHF 3247


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3240 VPFCSNHF 3247


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3239 VPFCSNHF 3246


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3238 VPFCSNHF 3245


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3238 VPFCSNHF 3245


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3238 VPFCSNHF 3245


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3238 VPFCSNHF 3245


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3228 VPFCSHHF 3235


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3228 VPFCSHHF 3235


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3224 VPFCSHHF 3231


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3217 VPFCSHHF 3224


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3216 VPFCSHHF 3223


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3217 VPFCSHHF 3224


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3216 VPFCSHHF 3223


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3216 VPFCSHHF 3223


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3217 VPFCSHHF 3224


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3216 VPFCSHHF 3223


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3216 VPFCSHHF 3223


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3216 VPFCSHHF 3223


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3209 VPFCSHHF 3216


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3231 VPFCSHHF 3238


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3218 VPFCSHHF 3225


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3216 VPFCSHHF 3223


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3218 VPFCSHHF 3225


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3235 VPFCSHHF 3242


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3231 VPFCSHHF 3238


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3219 VPFCSHHF 3226


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3218 VPFCSHHF 3225


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3218 VPFCSHHF 3225


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3218 VPFCSHHF 3225


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3218 VPFCSHHF 3225


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3216 VPFCSHHF 3223


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3220 VPFCSHHF 3227


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3194 VPFCSHHF 3201


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3194 VPFCSHHF 3201


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3194 VPFCSHHF 3201


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3194 VPFCSHHF 3201


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3194 VPFCSHHF 3201


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3196 VPFCSHHF 3203


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3196 VPFCSHHF 3203


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3196 VPFCSHHF 3203


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3196 VPFCSHHF 3203


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3196 VPFCSHHF 3203


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3197 VPFCSHHF 3204


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3194 VPFCSHHF 3201


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3197 VPFCSHHF 3204


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3197 VPFCSHHF 3204


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3197 VPFCSHHF 3204


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3197 VPFCSHHF 3204


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3197 VPFCSHHF 3204


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3198 VPFCSHHF 3205


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3197 VPFCSHHF 3204


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3198 VPFCSHHF 3205


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3234 VPFCSHHF 3241


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3198 VPFCSHHF 3205


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 1    MPLCEKHF 8
            +P C  HF
Sbjct: 3220 VPFCSHHF 3227


>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 3   LCEKH 7
           LCEKH
Sbjct: 499 LCEKH 503


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   LCEKH 7
           LCEKH
Sbjct: 499 LCEKH 503


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1    MPLCEKHF 8
            +P+C++H 
Sbjct: 1549 LPVCQEHL 1556


>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 3   LCEKHFM 9
           +CE+H++
Sbjct: 281 MCEEHYL 287


>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3

Query: 1 MPLCEKHFM 9
         MPL  +HF+
Sbjct: 1 MPLSYQHFL 9


>sp|DR3_HHV6U|UNCHARACTERIZED protein DR3|Human herpesvirus 6A (strain Uganda-1102)

Query: 2  PLCEKHFM 9
          P C  HF+
Sbjct: 73 PACSPHFV 80


>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)

Query: 1   MPLCEKHFM 9
           + LC K+FM
Sbjct: 306 IKLCIKYFM 314


>sp|VC02_VACCT|KELCH repeat protein C2|Vaccinia virus (strain Tian Tan)

Query: 4   CEKHFMH 10
           CEK F+ 
Sbjct: 506 CEKQFLQ 512


>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4   CEKHFMH 10
           CEK F+ 
Sbjct: 506 CEKQFLQ 512


>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /

Query: 4   CEKHFMH 10
           CEK F+ 
Sbjct: 506 CEKQFLQ 512


>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)

Query: 2   PLCEKH 7
           P+C++H
Sbjct: 815 PVCQRH 820


>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)

Query: 2   PLCEKH 7
           P+C++H
Sbjct: 815 PVCQRH 820


>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)

Query: 2   PLCEKH 7
           P+C++H
Sbjct: 815 PVCQRH 820


>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)

Query: 2   PLCEKH 7
           P+C++H
Sbjct: 815 PVCQRH 820


>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)

Query: 2   PLCEKH 7
           P+C++H
Sbjct: 815 PVCQRH 820


>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)

Query: 2   PLCEKH 7
           P+C++H
Sbjct: 815 PVCQRH 820


>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)

Query: 2   PLCEKH 7
           P+C++H
Sbjct: 815 PVCQRH 820


>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)

Query: 2   PLCEKH 7
           P+C++H
Sbjct: 815 PVCQRH 820


>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)

Query: 2   PLCEKH 7
           P+C++H
Sbjct: 815 PVCQRH 820


>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)

Query: 5   EKHFMH 10
           E HF H
Sbjct: 293 ESHFQH 298


>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 5   EKHFMH 10
           E HF H
Sbjct: 293 ESHFQH 298


>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain

Query: 4   CEKHFM 9
           C+KH M
Sbjct: 651 CDKHAM 656


>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)

Query: 3   LCEKH 7
           LC+KH
Sbjct: 497 LCKKH 501


>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)

Query: 3   LCEKH 7
           LC+KH
Sbjct: 497 LCKKH 501


>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8


>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D

Query: 1 MPLCEKHF 8
         MPL  +HF
Sbjct: 1 MPLSYQHF 8




165|SequenceR|830|821|SNMSPMPLCE

>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 2   NMSPMPLCE 10
           N  P PLC+
Sbjct: 229 NYRPQPLCQ 237


>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)

Query: 5   PMPLCE 10
           P+P+CE
Sbjct: 366 PVPVCE 371


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 3   MSPMPLCE 10
           M+P  LCE
Sbjct: 360 MTPQQLCE 367


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 3   MSPMPLCE 10
           M+P  LCE
Sbjct: 360 MTPQQLCE 367


>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate

Query: 2   NMSPMPLCE 10
           N  P PLC+
Sbjct: 156 NHDPTPLCQ 164


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    SNMSPMPLCE 10
            SN++ M  CE
Sbjct: 2251 SNVTTMDFCE 2260


>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3

Query: 3  MSPMPLCE 10
          ++P PLC+
Sbjct: 56 VTPWPLCQ 63


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1    SNMSPMPLCE 10
            SN++ M  CE
Sbjct: 2251 SNVTTMDFCE 2260


>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 5   PMPLC 9
           P PLC
Sbjct: 232 PQPLC 236


>sp|NCAP_CVHOC|NUCLEOPROTEIN coronavirus OC43 (HCoV-OC43)

Query: 2   NMSPMP 7
           NMSP P
Sbjct: 388 NMSPKP 393


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 4   SPMPLCE 10
           +PM +CE
Sbjct: 173 TPMQMCE 179


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 4   SPMPLCE 10
           +PM +CE
Sbjct: 173 TPMQMCE 179


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 4   SPMPLCE 10
           +PM +CE
Sbjct: 173 TPMQMCE 179


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 4   SPMPLCE 10
           +PM +CE
Sbjct: 173 TPMQMCE 179


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 4   SPMPLCE 10
           +PM +CE
Sbjct: 173 TPMQMCE 179


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 4   SPMPLCE 10
           +PM +CE
Sbjct: 173 TPMQMCE 179


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 4   SPMPLCE 10
           +PM +CE
Sbjct: 173 TPMQMCE 179


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 4   SPMPLCE 10
           +PM +CE
Sbjct: 173 TPMQMCE 179


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 4   SPMPLCE 10
           +PM +CE
Sbjct: 173 TPMQMCE 179


>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 5   PMPLC 9
           P+PLC
Sbjct: 599 PVPLC 603


>sp|TRX2_VZVD|TRIPLEX capsid protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   NMSPMPLC 9
           N SP+ LC
Sbjct: 100 NTSPVDLC 107


>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   SNMSPMP 7
           SN+SP P
Sbjct: 312 SNISPQP 318




166|SequenceR|835|826|CFQAASNMSP

>sp|VGPCR_HHV8P|VIRAL G-protein coupled receptor|Human herpesvirus 8 type P

Query: 1   CFQAASNMS 9
           C++ A NM+
Sbjct: 196 CYENAGNMT 204


>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8

Query: 1   CFQAASNMSP 10
           C + A NM P
Sbjct: 546 CIERALNMPP 555




167|SequenceR|840|831|ASCINCFQAA

>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse

Query: 1    ASCINCFQ 8
            A CINCFQ
Sbjct: 1270 AGCINCFQ 1277


>sp|UL117_HCMVM|PROTEIN UL117|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   ASCINCFQA 9
           ASC N FQA
Sbjct: 292 ASCGNAFQA 300


>sp|UL117_HCMVA|PROTEIN UL117|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   ASCINCFQA 9
           ASC N FQA
Sbjct: 291 ASCGNAFQA 299


>sp|VE8E2_HPV57|PROTEIN E8^E2C|Human papillomavirus 57

Query: 1   ASCINCFQ 8
           A+C+ CF+
Sbjct: 120 ANCLKCFR 127


>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40

Query: 1   ASCINCFQ 8
           A+C+ CF+
Sbjct: 299 ANCLKCFR 306


>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27

Query: 1   ASCINCFQ 8
           A+C+ CF+
Sbjct: 316 ANCLKCFR 323


>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7

Query: 1   ASCINCFQ 8
           A+C+ CF+
Sbjct: 304 ANCLKCFR 311


>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United

Query: 3    CINCFQ 8
            CINCF+
Sbjct: 1272 CINCFE 1277


>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57

Query: 1   ASCINCFQ 8
           A+C+ CF+
Sbjct: 311 ANCLKCFR 318


>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a

Query: 1   ASCINCFQ 8
           A+C+ CF+
Sbjct: 319 ANCLKCFR 326


>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare

Query: 3    CINCFQ 8
            CINCF+
Sbjct: 1272 CINCFE 1277


>sp|KITH_VAR67|THYMIDINE kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   ASCINCFQAA 10
           A C+ CF+ A
Sbjct: 136 AVCMKCFKEA 145


>sp|KITH_VACCT|THYMIDINE kinase|Vaccinia virus (strain Tian Tan)

Query: 1   ASCINCFQAA 10
           A C+ CF+ A
Sbjct: 136 AVCMKCFKEA 145


>sp|KITH_VACCC|THYMIDINE kinase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   ASCINCFQAA 10
           A C+ CF+ A
Sbjct: 136 AVCMKCFKEA 145


>sp|KITH_VACCA|THYMIDINE kinase|Vaccinia virus (strain Ankara) (VACV)

Query: 1   ASCINCFQAA 10
           A C+ CF+ A
Sbjct: 136 AVCMKCFKEA 145


>sp|KITH_MONPV|THYMIDINE kinase|Monkeypox virus (MPXV)

Query: 1   ASCINCFQAA 10
           A C+ CF+ A
Sbjct: 136 AVCMKCFKEA 145


>sp|KITH_VARV|THYMIDINE kinase|Variola virus

Query: 1   ASCINCFQAA 10
           A C+ CF+ A
Sbjct: 136 AVCMKCFKEA 145


>sp|KITH_MONPZ|THYMIDINE kinase|Monkeypox virus (strain Zaire-96-I-16) (MPXV)

Query: 1   ASCINCFQAA 10
           A C+ CF+ A
Sbjct: 136 AVCMKCFKEA 145


>sp|NEC1_HHV7J|NUCLEAR egress protein 1|Human herpesvirus 7 (strain JI)

Query: 1  ASCINC 6
          ++C+NC
Sbjct: 94 SACVNC 99


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 3    CINCFQAA 10
            C NC Q A
Sbjct: 1393 CKNCHQPA 1400


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 3    CINCFQAA 10
            C NC Q A
Sbjct: 1394 CKNCHQPA 1401


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 3    CINCFQAA 10
            C NC Q A
Sbjct: 1396 CKNCHQPA 1403


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 3    CINCFQAA 10
            C NC Q A
Sbjct: 1396 CKNCHQPA 1403


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1    ASCINC 6
            A+C+NC
Sbjct: 4674 ANCVNC 4679


>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 1   ASCINCFQA 9
           A C N F+A
Sbjct: 689 AKCCNLFEA 697


>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 1   ASCINCFQA 9
           A C N F+A
Sbjct: 689 AKCCNLFEA 697


>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann

Query: 1   ASCINCFQA 9
           A C N F+A
Sbjct: 689 AKCCNLFEA 697


>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann

Query: 1   ASCINCFQA 9
           A C N F+A
Sbjct: 689 AKCCNLFEA 697


>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)

Query: 3   CINCF 7
           CI CF
Sbjct: 164 CITCF 168


>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)

Query: 3   CINCF 7
           CI CF
Sbjct: 164 CITCF 168


>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)

Query: 3   CINCF 7
           CI CF
Sbjct: 164 CITCF 168


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 3    CINCFQ 8
            CINC +
Sbjct: 1289 CINCVR 1294


>sp|VE2_HPV6B|REGULATORY protein E2|Human papillomavirus type 6b

Query: 1   ASCINCFQ 8
           ++C+ CF+
Sbjct: 294 SNCLKCFR 301


>sp|ST_POVBK|SMALL t antigen|BK polyomavirus (BKPyV) (Human polyomavirus

Query: 3   CINCF 7
           CI+CF
Sbjct: 138 CIDCF 142


>sp|ST_POVBA|SMALL t antigen|BK polyomavirus (strain AS) (BKPyV)

Query: 3   CINCF 7
           CI+CF
Sbjct: 138 CIDCF 142


>sp|VE2_HPV6A|REGULATORY protein E2|Human papillomavirus type 6a

Query: 1   ASCINCFQ 8
           ++C+ CF+
Sbjct: 294 SNCLKCFR 301


>sp|PAX_I34A1|PROTEIN PA-X|Influenza A virus (strain A/Puerto

Query: 1   ASCINC 6
           ASC+ C
Sbjct: 244 ASCLKC 249


>sp|PAX_I06A0|PROTEIN PA-X|Influenza A virus (strain A/Russia:St.Petersburg/8/2006

Query: 1   ASCINC 6
           ASC+ C
Sbjct: 244 ASCLKC 249


>sp|PAX_I000X|PROTEIN PA-X|Influenza A virus (strain A/X-31

Query: 1   ASCINC 6
           ASC+ C
Sbjct: 244 ASCLKC 249


>sp|VE2_HPV13|REGULATORY protein E2|Human papillomavirus 13

Query: 1   ASCINCFQ 8
           ++C+ CF+
Sbjct: 303 SNCLKCFR 310


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 2   SCINCFQ 8
           +CI+C Q
Sbjct: 720 TCISCAQ 726


Query: 3   CINCFQ 8
           C++C Q
Sbjct: 305 CVSCIQ 310


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 2   SCINCFQ 8
           +CI+C Q
Sbjct: 720 TCISCAQ 726


Query: 3   CINCFQ 8
           C++C Q
Sbjct: 305 CVSCIQ 310


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 2   SCINCFQ 8
           +CI+C Q
Sbjct: 720 TCISCAQ 726


Query: 3   CINCFQ 8
           C++C Q
Sbjct: 305 CVSCIQ 310


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 2   SCINCFQ 8
           +CI+C Q
Sbjct: 720 TCISCAQ 726


Query: 3   CINCFQ 8
           C++C Q
Sbjct: 305 CVSCIQ 310


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 2   SCINCFQ 8
           +CI+C Q
Sbjct: 720 TCISCAQ 726


Query: 3   CINCFQ 8
           C++C Q
Sbjct: 305 CVSCIQ 310


>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28

Query: 2   SCINCFQ 8
           +C+ CF+
Sbjct: 305 NCLKCFR 311


>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3

Query: 2   SCINCFQ 8
           +C+ CF+
Sbjct: 312 NCLKCFR 318


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2    SCINCF 7
            +CINC 
Sbjct: 4666 NCINCL 4671


>sp|VE2_HPV11|REGULATORY protein E2|Human papillomavirus 11

Query: 1   ASCINCFQ 8
           ++C+ CF+
Sbjct: 293 SNCLKCFR 300


>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)

Query: 3  CINCF 7
          C NCF
Sbjct: 62 CPNCF 66


>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)

Query: 3  CINCF 7
          C NCF
Sbjct: 69 CPNCF 73


>sp|VE8E2_HPV11|PROTEIN E8^E2C|Human papillomavirus 11

Query: 1   ASCINCFQ 8
           ++C+ CF+
Sbjct: 103 SNCLKCFR 110


>sp|HEMA_INBFU|HEMAGGLUTININ B virus (strain B/Fukuoka/80/1981)

Query: 2  SCINC 6
          +C+NC
Sbjct: 56 NCLNC 60


>sp|HEMA_INBYB|HEMAGGLUTININ B virus (strain B/Yamagata/16/1988)

Query: 2  SCINC 6
          +C+NC
Sbjct: 56 NCLNC 60


>sp|HEMA_INBSD|HEMAGGLUTININ B virus (strain B/South

Query: 2  SCINC 6
          +C+NC
Sbjct: 71 NCLNC 75


>sp|HEMA_INBGL|HEMAGGLUTININ B virus (strain B/GL/1954)

Query: 2  SCINC 6
          +C+NC
Sbjct: 67 NCLNC 71


>sp|HEMA_INBBK|HEMAGGLUTININ B virus (strain B/Bangkok/163/1990)

Query: 2  SCINC 6
          +C+NC
Sbjct: 71 NCLNC 75


>sp|HEMA_INBTE|HEMAGGLUTININ B virus (strain B/Texas/1/1991)

Query: 2  SCINC 6
          +C+NC
Sbjct: 71 NCLNC 75


>sp|HEMA_INBNY|HEMAGGLUTININ B virus (strain B/New

Query: 2  SCINC 6
          +C+NC
Sbjct: 71 NCLNC 75


>sp|HEMA_INBHM|HEMAGGLUTININ B virus (strain B/Hong

Query: 2  SCINC 6
          +C+NC
Sbjct: 71 NCLNC 75


>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)

Query: 2  SCINC 6
          +C+NC
Sbjct: 71 NCLNC 75




168|SequenceR|845|836|PGRNKASCIN

>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 1  PGRNKA 6
          PGRN+A
Sbjct: 8  PGRNRA 13


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 1  PGRNKA 6
          PGRN+A
Sbjct: 8  PGRNRA 13


>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain

Query: 2   GRNKASC 8
           GRN+ SC
Sbjct: 233 GRNRKSC 239


>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)

Query: 1  PGRNKASC 8
          PG+++A+C
Sbjct: 43 PGQDRATC 50


>sp|UL121_HCMVM|MEMBRANE protein UL121|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  PGRNKASC 8
          PGR + SC
Sbjct: 35 PGRLRISC 42


>sp|UL121_HCMVA|MEMBRANE protein UL121|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  PGRNKASC 8
          PGR + SC
Sbjct: 35 PGRLRISC 42


>sp|V_MEASC|NON-STRUCTURAL protein V|Measles virus (strain Ichinose-B95a) (MeV)

Query: 1  PGRNKASC 8
          PG+++A+C
Sbjct: 43 PGQDRATC 50


>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)

Query: 1  PGRNKASC 8
          PG+ +A+C
Sbjct: 43 PGQERATC 50


>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)

Query: 1  PGRNKASC 8
          PG+ +A+C
Sbjct: 43 PGQERATC 50


>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)

Query: 1  PGRNKASC 8
          PG+ +A+C
Sbjct: 43 PGQERATC 50


>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)

Query: 1  PGRNKASC 8
          PG+ +A+C
Sbjct: 43 PGQERATC 50


>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)

Query: 1  PGRNKASC 8
          PG+ +A+C
Sbjct: 43 PGQEQATC 50


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 1  PGRNKA 6
          PG+N+A
Sbjct: 8  PGKNRA 13


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 1  PGRNKA 6
          PG+N+A
Sbjct: 8  PGKNRA 13


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 1  PGRNKA 6
          PG+N+A
Sbjct: 8  PGKNRA 13


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 1  PGRNKA 6
          PG+N+A
Sbjct: 8  PGKNRA 13


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 1  PGRNKA 6
          PG+N+A
Sbjct: 8  PGKNRA 13


>sp|V_MEASE|NON-STRUCTURAL protein V|Measles virus (strain Edmonston) (MeV)

Query: 1  PGRNKASC 8
          PG+ +A+C
Sbjct: 43 PGQERATC 50


>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)

Query: 1  PGRNKASC 8
          PG+ +A+C
Sbjct: 43 PGQERATC 50


>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 1  PGRNKASC 8
          PG+ +A+C
Sbjct: 43 PGQERATC 50


>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)

Query: 2   GRNKASCIN 10
           G+N+A C N
Sbjct: 388 GKNQALCEN 396


>sp|V_MEASI|NON-STRUCTURAL protein V|Measles virus (strain IP-3-Ca) (MeV)

Query: 1  PGRNKASC 8
          PG+ +A+C
Sbjct: 43 PGQEQATC 50


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 2    GRNKASCI 9
            G NKA C+
Sbjct: 2429 GCNKAGCL 2436


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 2    GRNKASCI 9
            G NKA C+
Sbjct: 2449 GCNKAGCL 2456


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 2    GRNKASCI 9
            G NKA C+
Sbjct: 2479 GCNKAGCL 2486


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 2    GRNKASCI 9
            G NKA C+
Sbjct: 2429 GCNKAGCL 2436


Query: 4    NKASCIN 10
            N+A+C N
Sbjct: 6149 NRATCYN 6155


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 2    GRNKASCI 9
            G NKA C+
Sbjct: 2449 GCNKAGCL 2456


Query: 4    NKASCIN 10
            N+A+C N
Sbjct: 6169 NRATCYN 6175


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 2    GRNKASCI 9
            G NKA C+
Sbjct: 2479 GCNKAGCL 2486


Query: 4    NKASCIN 10
            N+A+C N
Sbjct: 6199 NRATCYN 6205


>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P

Query: 1   PGRNKASCIN 10
           PG  K SC N
Sbjct: 444 PGYAKPSCYN 453


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 1    PGRNKASCIN 10
            PG+ +  C N
Sbjct: 1451 PGKPQLDCFN 1460


>sp|PHOSP_PI1HE|PHOSPHOPROTEIN parainfluenza 1 virus (strain

Query: 1  PGRNKASC 8
          P  NK+SC
Sbjct: 57 PKENKSSC 64


>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 1  PGRNKA 6
          PG+N+A
Sbjct: 8  PGKNRA 13


>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 1  PGRNKA 6
          PG+N+A
Sbjct: 8  PGKNRA 13


>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 1  PGRNKA 6
          PG+N+A
Sbjct: 8  PGKNRA 13


>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)

Query: 1  PGRNKA 6
          PG+N+A
Sbjct: 8  PGKNRA 13


>sp|E1A_ADE12|EARLY E1A protein|Human adenovirus A serotype 12

Query: 1   PGRNKASC 8
           PG N  SC
Sbjct: 155 PGHNCKSC 162




169|SequenceR|854|841|KKMELIASGPGRNK

>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 1    KKMELIASGPGRN 13
            ++++LIA+ PG+N
Sbjct: 1579 EEVQLIAAAPGKN 1591


>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 6   IASGPGR 12
           +ASGPGR
Sbjct: 237 VASGPGR 243


>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 6   IASGPGR 12
           +ASGPGR
Sbjct: 237 VASGPGR 243


>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 6   IASGPGR 12
           +ASGPGR
Sbjct: 237 VASGPGR 243


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 1    KKMELIASGPGRN 13
            ++++LIA+ PG+N
Sbjct: 1579 EEVQLIAAVPGKN 1591


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1    KKMELIASGPGRN 13
            ++++LIA+ PG+N
Sbjct: 1579 EEVQLIAAVPGKN 1591


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 1    KKMELIASGPGRN 13
            ++++LIA+ PG+N
Sbjct: 1579 EEVQLIAAVPGKN 1591


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1    KKMELIASGPGRN 13
            ++++LIA+ PG+N
Sbjct: 1579 EEVQLIAAVPGKN 1591


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 1    KKMELIASGPGRN 13
            ++++LIA+ PG+N
Sbjct: 1579 EEVQLIAAVPGKN 1591


>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 6   IASGPGRN 13
           + SGPG+N
Sbjct: 500 VGSGPGKN 507


>sp|CEP2_HHV7J|CYTOPLASMIC envelopment protein 2|Human herpesvirus 7 (strain JI)

Query: 5   LIASGPGRNK 14
           L   GPG NK
Sbjct: 148 LTVKGPGENK 157


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 9  GPGRNK 14
          GPGRN+
Sbjct: 7  GPGRNR 12


>sp|NEC1_HHV2H|NUCLEAR egress protein 1|Human herpesvirus 2 (strain HG52)

Query: 9  GPGRNK 14
          GPGR+K
Sbjct: 14 GPGRDK 19


>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1

Query: 6   IASGPGR 12
           IA GPGR
Sbjct: 302 IAIGPGR 308


>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate

Query: 1    KKMELIASGPGRN 13
            + + L ASG G N
Sbjct: 1991 QSLSLYASGAGNN 2003


>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)

Query: 8   SGPGRNK 14
           +GPG NK
Sbjct: 332 TGPGENK 338


>sp|GK_HHV1R|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R15)

Query: 7   ASGPGRNK 14
           A+ PGR+K
Sbjct: 283 AAAPGRSK 290


>sp|GK_HHV1M|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain MP)

Query: 7   ASGPGRNK 14
           A+ PGR+K
Sbjct: 283 AAAPGRSK 290


>sp|GK_HHV1K|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain KOS)

Query: 7   ASGPGRNK 14
           A+ PGR+K
Sbjct: 283 AAAPGRSK 290


>sp|GK_HHV19|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R19)

Query: 7   ASGPGRNK 14
           A+ PGR+K
Sbjct: 283 AAAPGRSK 290


>sp|GK_HHV11|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain 17)

Query: 7   ASGPGRNK 14
           A+ PGR+K
Sbjct: 283 AAAPGRSK 290


>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 7   ASGPGRNK 14
           +S PGR+K
Sbjct: 495 SSAPGRHK 502


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 1    KKMELIASGPGR 12
            ++++LIA+ PG+
Sbjct: 1590 EEVQLIAAEPGK 1601


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 2   KMELIASGPGRN 13
           K+ + A+GP R 
Sbjct: 452 KISITATGPSRT 463


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1    KKMELIASGPGR 12
            ++++LIA  PG+
Sbjct: 1573 EEVQLIAVSPGK 1584


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 1    KKMELIASGPGRN 13
            ++++LIA+ PG++
Sbjct: 1579 EEVQLIAAVPGKS 1591


>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1    KKMELIASGPGRN 13
            KK+  I  G GRN
Sbjct: 1080 KKLAAILLGNGRN 1092


>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1    KKMELIASGPGRN 13
            KK+  I  G GRN
Sbjct: 1081 KKLAAILLGNGRN 1093


>sp|M1_DHVI1|MATRIX protein 1|Dhori virus (strain Indian/1313/61) (Dho)

Query: 1   KKMELIASGPGR 12
           +++E +A+G GR
Sbjct: 209 RELEKLAAGSGR 220


>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 9  GPGRNK 14
          GPG+N+
Sbjct: 7  GPGKNR 12


>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 9  GPGRNK 14
          GPG+N+
Sbjct: 7  GPGKNR 12


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 1    KKMELIASGPGR 12
            ++++LIA+ PG+
Sbjct: 1579 EEVQLIAAVPGK 1590


>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)

Query: 9  GPGRNK 14
          GPG+N+
Sbjct: 7  GPGKNR 12


>sp|UL20_HHV2H|PROTEIN UL20|Human herpesvirus 2 (strain HG52)

Query: 1  KKMELIASG 9
          K +EL+A+G
Sbjct: 75 KPLELVAAG 83


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 1    KKMELIASGPGR 12
            ++++LIA+ PG+
Sbjct: 1579 EEVQLIAAVPGK 1590


>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1    KKMELIASGPGRN 13
            KK+  I  G GRN
Sbjct: 1077 KKLAAILLGNGRN 1089


>sp|SHDAG_HDVP1|SMALL delta antigen|Hepatitis delta virus genotype III

Query: 6  IASGPGR 12
          + SGPGR
Sbjct: 80 VDSGPGR 86


>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 9  GPGRNK 14
          GPG+N+
Sbjct: 7  GPGKNR 12


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 9  GPGRNK 14
          GPG+N+
Sbjct: 7  GPGKNR 12


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 9  GPGRNK 14
          GPG+N+
Sbjct: 7  GPGKNR 12


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 9  GPGRNK 14
          GPG+N+
Sbjct: 7  GPGKNR 12


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 9  GPGRNK 14
          GPG+N+
Sbjct: 7  GPGKNR 12


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 9  GPGRNK 14
          GPG+N+
Sbjct: 7  GPGKNR 12


>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2

Query: 8   SGPGRN 13
           SGPG N
Sbjct: 621 SGPGNN 626


>sp|NEC2_HCMVM|NUCLEAR egress protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   MELIASGP 10
           +ELIA GP
Sbjct: 146 IELIAFGP 153


>sp|LHDAG_HDVP1|LARGE delta antigen|Hepatitis delta virus genotype III

Query: 6  IASGPGR 12
          + SGPGR
Sbjct: 80 VDSGPGR 86


>sp|NEC2_HCMVA|NUCLEAR egress protein 2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   MELIASGP 10
           +ELIA GP
Sbjct: 146 IELIAFGP 153


>sp|CVC1_HHV8P|CAPSID vertex component 1|Human herpesvirus 8 type P

Query: 5   LIASGPGRN 13
           ++A G GRN
Sbjct: 121 VVAMGAGRN 129




THE END