VPS41_HUMAN Blast Output
Archaea
1|Sequence|1|10|MAEAEEQETG

***** No hits found ******


2|Sequence|6|15|EQETGSLEES

***** No hits found ******


3|Sequence|11|20|SLEESTDESE

>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 2 LEESTDESE 10
LEESTD +E
Sbjct: 458 LEESTDLNE 466




4|Sequence|16|25|TDESEEEESE

***** No hits found ******


5|Sequence|21|30|EEESEEEPKL

>sp|MFNA_METST|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosphaera stadtmanae

Query: 1 EEESEEEPKL 10
EEE+E P+L
Sbjct: 107 EEENEGTPEL 116


>sp|RL3_METBU|LARGE ribosomal subunit protein uL3|Methanococcoides burtonii (strain

Query: 3 ESEEEPKL 10
ES+ EPKL
Sbjct: 32 ESDAEPKL 39


>sp|SRP19_METST|SIGNAL recognition particle 19 kDa|Methanosphaera stadtmanae (strain

Query: 2 EESEEEPKL 10
EES EEPK+
Sbjct: 25 EESVEEPKI 33


>sp|HIS5_PYRFU|IMIDAZOLE glycerol phosphate synthase subunit|Pyrococcus furiosus (strain

Query: 2 EESEEEP 8
EESEE P
Sbjct: 82 EESEESP 88




6|Sequence|26|35|EEPKLKYERL

>sp|Y950_SULTO|UPF0200 protein STK_09500|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PKLKYERL 10
PKL+YERL
Sbjct: 111 PKLRYERL 118


>sp|RS5_STAMF|SMALL ribosomal subunit protein uS5|Staphylothermus marinus (strain

Query: 3 PKLKYERL 10
P LKYERL
Sbjct: 53 PDLKYERL 60


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PKLKYE 8
PKLKYE
Sbjct: 1297 PKLKYE 1302


>sp|Y868_THEGJ|UPF0200 protein TGAM_0868|Thermococcus gammatolerans (strain DSM 15229

Query: 3 PKLKYERL 10
P+L++ERL
Sbjct: 116 PRLRFERL 123


>sp|SYM_SULTO|METHIONINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EEPKLKYERL 10
E P++KYE+L
Sbjct: 407 EVPQIKYEKL 416


>sp|RS5_SACI1|SMALL ribosomal subunit protein uS5|Saccharolobus islandicus (strain

Query: 3 PKLKYE 8
PKLKYE
Sbjct: 52 PKLKYE 57


>sp|RS5_SACS2|SMALL ribosomal subunit protein uS5|Saccharolobus solfataricus (strain

Query: 3 PKLKYE 8
PKLKYE
Sbjct: 52 PKLKYE 57


>sp|RS5_SULTO|SMALL ribosomal subunit protein uS5|Sulfurisphaera tokodaii (strain DSM

Query: 3 PKLKYERL 10
PKLKYE +
Sbjct: 52 PKLKYEVM 59


>sp|Y311_METM5|UPF0200 protein MmarC5_0311|Methanococcus maripaludis (strain C5 /

Query: 3 PKLKYERL 10
PK ++ERL
Sbjct: 114 PKTRFERL 121


>sp|Y1675_SACI1|UPF0200 protein YN1551_1675|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 PKLKYERL 10
PK++Y+R+
Sbjct: 119 PKIRYKRM 126


>sp|Y1277_SACI2|UPF0200 protein LS215_1277|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 PKLKYERL 10
PK++Y+R+
Sbjct: 119 PKIRYKRM 126


>sp|Y1244_SACI3|UPF0200 protein M1627_1244|Saccharolobus islandicus (strain M.16.27)

Query: 3 PKLKYERL 10
PK++Y+R+
Sbjct: 119 PKIRYKRM 126


>sp|Y1180_SACI4|UPF0200 protein M1425_1180|Saccharolobus islandicus (strain M.14.25 /

Query: 3 PKLKYERL 10
PK++Y+R+
Sbjct: 119 PKIRYKRM 126


>sp|Y1041_SACS2|UPF0200 protein SSO1041|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PKLKYERL 10
PK++Y+R+
Sbjct: 119 PKIRYKRM 126


>sp|Y1176_SACI7|UPF0200 protein YG5714_1176|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 PKLKYERL 10
PK++Y+R+
Sbjct: 119 PKIRYKRM 126


>sp|Y1169_SACI6|UPF0200 protein M164_1169|Saccharolobus islandicus (strain M.16.4 /

Query: 3 PKLKYERL 10
PK++Y+R+
Sbjct: 119 PKIRYKRI 126


>sp|Y592_METVS|UPF0200 protein Mevan_0592|Methanococcus vannielii (strain ATCC 35089

Query: 3 PKLKYERL 10
PK ++ERL
Sbjct: 114 PKTRFERL 121


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EEPKLKYER 9
E K+KYER
Sbjct: 56 ENQKIKYER 64


>sp|Y1615_METJA|CHEF taxis protein family member|Methanocaldococcus jannaschii (strain

Query: 1 EEPKLKYERL 10
E+P LK+E+L
Sbjct: 24 EKPLLKWEKL 33


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EEPKLKYER 9
E K+KYER
Sbjct: 56 ENQKIKYER 64


>sp|Y1392_METM6|UPF0200 protein MmarC6_1392|Methanococcus maripaludis (strain C6 /

Query: 3 PKLKYERL 10
PK ++ERL
Sbjct: 114 PKTRFERL 121


>sp|Y1282_METMP|UPF0200 protein MMP1282|Methanococcus maripaludis (strain DSM 14266

Query: 3 PKLKYERL 10
PK ++ERL
Sbjct: 114 PKTRFERL 121


>sp|Y054_METJA|UNCHARACTERIZED protein MJ0054|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EPKLKY 7
EPK+KY
Sbjct: 26 EPKIKY 31




7|Sequence|31|40|KYERLSNGVT

>sp|TOP6B_THEON|TYPE 2 DNA topoisomerase 6|Thermococcus onnurineus (strain NA1)

Query: 2 YERLSNG 8
YERL NG
Sbjct: 297 YERLMNG 303


>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YERLSNGVT 10
Y LSNG+T
Sbjct: 3 YALLSNGIT 11


>sp|Y1428_METJA|TPR repeat-containing protein MJ1428|Methanocaldococcus jannaschii

Query: 2 YERLSNGVT 10
YE L+NG+T
Sbjct: 202 YEDLNNGLT 210




8|Sequence|36|45|SNGVTEILQK

>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SNGVTEILQK 10
SNG+T L+K
Sbjct: 7 SNGITTALEK 16


>sp|ALBA_METPE|DNA/RNA-BINDING protein Alba|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 SNGVTEILQK 10
SNG TE++ K
Sbjct: 26 SNGATEVIIK 35


>sp|DNAG_METVS|DNA primase DnaG|Methanococcus vannielii (strain ATCC 35089

Query: 2 NGVTEILQ 9
NGV EIL+
Sbjct: 354 NGVKEILE 361


>sp|MDH_METMA|MALATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SNGVTEILQ 9
+NG+ EIL+
Sbjct: 272 ANGIEEILE 280




9|Sequence|41|50|EILQKDAASC

>sp|SYS_METB6|SERINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 EILQKDAAS 9
EIL KDA S
Sbjct: 32 EILAKDARS 40


>sp|RKD4_PYRCJ|ARCADIN-4 calidifontis (strain DSM 21063

Query: 1 EILQKDAA 8
EILQ DAA
Sbjct: 475 EILQGDAA 482




10|Sequence|46|55|DAASCMTVHD

***** No hits found ******


11|Sequence|51|60|MTVHDKFLAL

>sp|SYR_METBF|ARGININE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 VHDKFLA 9
VHDKF++
Sbjct: 249 VHDKFVS 255


>sp|SYR_METAC|ARGININE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 VHDKFL 8
VHDKF+
Sbjct: 247 VHDKFV 252


>sp|SYR_METLZ|ARGININE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 VHDKFL 8
VHDKF+
Sbjct: 244 VHDKFV 249


>sp|TTUA_METJA|TRNA-5-METHYLURIDINE(54) 2-sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 MTVHDKFL 8
+ HDKFL
Sbjct: 185 LPAHDKFL 192




12|Sequence|56|65|KFLALGTHYG

>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 4 ALGTHY 9
ALGTHY
Sbjct: 900 ALGTHY 905


>sp|RS2_STAMF|SMALL ribosomal subunit protein uS2|Staphylothermus marinus (strain

Query: 1 KFLALGTHYG 10
K+LA G H G
Sbjct: 30 KYLAAGVHIG 39


>sp|RS7_HALMO|SMALL ribosomal subunit protein uS7|Halococcus morrhuae (Micrococcus

Query: 1 KFLALGTH 8
KF+A GTH
Sbjct: 151 KFIAEGTH 158


>sp|RS2_METTH|SMALL ribosomal subunit protein uS2|Methanothermobacter

Query: 1 KFLALGTHYG 10
K+LA G H G
Sbjct: 10 KYLAAGLHIG 19


>sp|RS2_METST|SMALL ribosomal subunit protein uS2|Methanosphaera stadtmanae (strain

Query: 1 KFLALGTHYG 10
K+LA G H G
Sbjct: 10 KYLAAGLHIG 19


>sp|RL4_THEKO|LARGE ribosomal subunit protein uL4|Thermococcus kodakarensis (strain

Query: 1 KFLALGTHYG 10
++LA GTH G
Sbjct: 228 EYLAPGTHPG 237


>sp|RNZ_METJA|RIBONUCLEASE Z|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LALGTHY 9
L LGTHY
Sbjct: 104 LKLGTHY 110


>sp|GLMS_THEKO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Thermococcus kodakarensis (strain

Query: 2 FLALGTHY 9
F+A+GT Y
Sbjct: 292 FVAMGTSY 299


>sp|GLMM_PYRFU|PROBABLE phosphoglucosamine mutase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LALGTHYG 10
LALGT+ G
Sbjct: 28 LALGTYLG 35


>sp|RS2_THEKO|SMALL ribosomal subunit protein uS2|Thermococcus kodakarensis (strain

Query: 1 KFLALGTHYG 10
++LA G H G
Sbjct: 10 QYLAAGVHIG 19


>sp|RS2_PYRHO|SMALL ribosomal subunit protein uS2|Pyrococcus horikoshii (strain ATCC

Query: 1 KFLALGTHYG 10
++LA G H G
Sbjct: 11 QYLAAGVHIG 20


>sp|RS2_PYRFU|SMALL ribosomal subunit protein uS2|Pyrococcus furiosus (strain ATCC

Query: 1 KFLALGTHYG 10
++LA G H G
Sbjct: 11 QYLAAGVHIG 20


>sp|RS2_PYRAB|SMALL ribosomal subunit protein uS2|Pyrococcus abyssi (strain GE5 /

Query: 1 KFLALGTHYG 10
++LA G H G
Sbjct: 11 QYLAAGVHIG 20


>sp|RS2_METTP|SMALL ribosomal subunit protein uS2|Methanothrix thermoacetophila

Query: 1 KFLALGTHYG 10
++LA G H G
Sbjct: 21 EYLAAGVHIG 30


>sp|RS2_METMJ|SMALL ribosomal subunit protein uS2|Methanoculleus marisnigri (strain

Query: 1 KFLALGTHYG 10
++LA G H G
Sbjct: 19 EYLAAGVHIG 28


>sp|RS2_METMA|SMALL ribosomal subunit protein uS2|Methanosarcina mazei (strain ATCC

Query: 1 KFLALGTHYG 10
++LA G H G
Sbjct: 41 EYLAAGVHIG 50


>sp|RS2_METLZ|SMALL ribosomal subunit protein uS2|Methanocorpusculum labreanum

Query: 1 KFLALGTHYG 10
++LA G H G
Sbjct: 19 EYLAAGVHIG 28


>sp|RS2_METHJ|SMALL ribosomal subunit protein uS2|Methanospirillum hungatei JF-1

Query: 1 KFLALGTHYG 10
++LA G H G
Sbjct: 19 EYLAAGVHIG 28


>sp|RS2_METBU|SMALL ribosomal subunit protein uS2|Methanococcoides burtonii (strain

Query: 1 KFLALGTHYG 10
++LA G H G
Sbjct: 31 EYLAAGVHIG 40


>sp|RS2_METBF|SMALL ribosomal subunit protein uS2|Methanosarcina barkeri (strain

Query: 1 KFLALGTHYG 10
++LA G H G
Sbjct: 42 EYLAAGVHIG 51


>sp|RS2_METB6|SMALL ribosomal subunit protein uS2|Methanoregula boonei (strain DSM

Query: 1 KFLALGTHYG 10
++LA G H G
Sbjct: 20 EYLAAGVHIG 29


>sp|RS2_METAR|SMALL ribosomal subunit protein uS2|Methanocella arvoryzae (strain DSM

Query: 1 KFLALGTHYG 10
++LA G H G
Sbjct: 23 EYLAAGVHIG 32


>sp|RS2_METAC|SMALL ribosomal subunit protein uS2|Methanosarcina acetivorans (strain

Query: 1 KFLALGTHYG 10
++LA G H G
Sbjct: 42 EYLAAGVHIG 51




13|Sequence|61|70|GTHYGKVYLL

>sp|TSR3_VULDI|16S rRNA aminocarboxypropyltransferase|Vulcanisaeta distributa (strain

Query: 2 THYGKVYLL 10
THYGK Y+L
Sbjct: 102 THYGKPYIL 110


>sp|RPO2N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanocaldococcus jannaschii (strain

Query: 1 GTHYGKV 7
GTH+GK+
Sbjct: 448 GTHWGKI 454


>sp|SUMT_METBF|S-ADENOSYL-L-METHIONINE-DEPENDENT uroporphyrinogen III methyltransferase|Methanosarcina barkeri

Query: 3 HYGKVYLL 10
+YGKVYL+
Sbjct: 4 NYGKVYLV 11


>sp|RS4E_NANEQ|SMALL ribosomal subunit protein eS4|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 THYGKVY 8
THYG VY
Sbjct: 156 THYGVVY 162


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 1 GTHYGKV 7
GTH+G++
Sbjct: 459 GTHWGRI 465


>sp|METK_METMI|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (Methanococcus deltae)

Query: 2 THYGKVY 8
TH GK+Y
Sbjct: 316 THIGKIY 322


>sp|Y298_ARCFU|UPF0332 protein AF_0298|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 THYGKVYLL 10
TH G +YL+
Sbjct: 55 THRGTIYLI 63


>sp|Y746_HALSA|UPF0229 protein VNG_0746C|Halobacterium salinarum (strain ATCC 700922

Query: 1 GTHYGKV 7
GTH GKV
Sbjct: 399 GTHAGKV 405


>sp|ENDA_METTH|TRNA-SPLICING endonuclease|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 THYGKVY 8
+HYGK+Y
Sbjct: 27 SHYGKMY 33


>sp|Y1477_THEKO|MEMO1 family protein TK1477|Thermococcus kodakarensis (strain ATCC

Query: 3 HYGKVY 8
HYG++Y
Sbjct: 191 HYGQIY 196


>sp|Y1401_METJA|PROBABLE ATP-dependent helicase MJ1401|Methanocaldococcus jannaschii (strain

Query: 1 GTH-YGKVYLL 10
G H GKVYLL
Sbjct: 530 GMHEIGKVYLL 540


>sp|PYLC_METBF|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GTHYGKVY 8
G+ YGK Y
Sbjct: 308 GSDYGKFY 315


>sp|METK_PICTO|S-ADENOSYLMETHIONINE synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 THYGKVY 8
TH GK+Y
Sbjct: 311 THVGKLY 317


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 1 GTHYGKVYL 9
GT Y KVY
Sbjct: 135 GTEYIKVYF 143


>sp|FBPAP_METS5|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Metallosphaera sedula (strain ATCC 51363

Query: 1 GTHYGKV 7
G+HYG +
Sbjct: 266 GSHYGPI 272


>sp|METK_THEVO|S-ADENOSYLMETHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 THYGKVY 8
TH GK+Y
Sbjct: 309 THVGKLY 315


>sp|Y457_METJA|UNCHARACTERIZED metallohydrolase MJ0457|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GTHYGKVYLL 10
G+ YG YLL
Sbjct: 157 GSEYGLKYLL 166


>sp|METK_THEON|S-ADENOSYLMETHIONINE synthase|Thermococcus onnurineus (strain NA1)

Query: 2 THYGKVYLL 10
+H GK+Y L
Sbjct: 315 SHVGKIYNL 323


>sp|METK_THEGJ|S-ADENOSYLMETHIONINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 THYGKVYLL 10
+H GK+Y L
Sbjct: 315 SHVGKIYNL 323


>sp|METK_PYRHO|S-ADENOSYLMETHIONINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 THYGKVYLL 10
+H GK+Y L
Sbjct: 312 SHVGKIYNL 320


>sp|METK_THEAC|S-ADENOSYLMETHIONINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 THYGKVY 8
TH GK+Y
Sbjct: 309 THVGKLY 315


>sp|Y912_METJA|UNCHARACTERIZED protein MJ0912|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HYGKVYL 9
H GK+YL
Sbjct: 169 HEGKIYL 175


>sp|TRM1_METJA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocaldococcus

Query: 3 HYGKVYLL 10
HY +VYL+
Sbjct: 219 HYVRVYLV 226


>sp|Y3936_METAC|UPF0060 membrane protein MA_3936|Methanosarcina acetivorans (strain ATCC

Query: 2 THYGKVY 8
+H+G+VY
Sbjct: 57 SHFGRVY 63


>sp|GATA_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Archaeoglobus fulgidus (strain ATCC

Query: 3 HYGKVYL 9
+YGK YL
Sbjct: 348 YYGKYYL 354




14|Sequence|66|75|KVYLLDVQGN

>sp|MTNA_AERPE|PUTATIVE methylthioribose-1-phosphate isomerase|Aeropyrum pernix (strain

Query: 1 KVYLLDVQGN 10
++Y+ DV+GN
Sbjct: 148 RIYVEDVRGN 157


>sp|GSA_META3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 YLLDVQGN 10
YL+DV GN
Sbjct: 49 YLVDVDGN 56


>sp|GSA_METJA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YLLDVQGN 10
YL DV GN
Sbjct: 44 YLFDVDGN 51


>sp|SECD_PYRFU|PROTEIN-EXPORT membrane protein SecD|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KVYLLDVQGN 10
++ LLDV GN
Sbjct: 233 RIILLDVDGN 242


>sp|ORNAT_PYRHO|ORNITHINE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VYLLDVQGN 10
VY +DV GN
Sbjct: 46 VYWIDVDGN 54


>sp|RL4_SULAC|LARGE ribosomal subunit protein uL4|Sulfolobus acidocaldarius (strain

Query: 1 KVYLLDVQGN 10
KV +LD++GN
Sbjct: 9 KVSVLDLKGN 18


>sp|MFNF_METJA|(4- jannaschii (strain ATCC 43067

Query: 2 VYLLDVQGN 10
VY+ DV GN
Sbjct: 89 VYVFDVNGN 97


>sp|FEN_THEPD|FLAP endonuclease 1|Thermofilum pendens (strain DSM 2475

Query: 4 LLDVQGN 10
LLD QGN
Sbjct: 49 LLDAQGN 55


>sp|BIOA_METJA|ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YLLDVQGN 10
YL+D+ GN
Sbjct: 41 YLIDIYGN 48


>sp|SYTC_AERPE|THREONINE--TRNA ligase catalytic subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 VYLLDVQGN 10
+YL D++G+
Sbjct: 95 MYLFDIEGH 103


>sp|NAC_META3|NASCENT polypeptide-associated complex protein|Methanococcus aeolicus

Query: 1 KVYLLDVQGN 10
KV ++DV GN
Sbjct: 48 KVQVMDVMGN 57


>sp|NARB_HALMT|PUTATIVE respiratory nitrate reductase subunit|Haloferax mediterranei

Query: 2 VYLLDVQGN 10
+YL+D GN
Sbjct: 85 IYLVDGDGN 93


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 3 YLLDVQGN 10
YL D+ GN
Sbjct: 777 YLKDIHGN 784


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 3 YLLDVQGN 10
YL D+ GN
Sbjct: 777 YLKDIHGN 784


>sp|Y22A_METJA|UNCHARACTERIZED protein MJ0226.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VYLLDVQGN 10
+YL+D GN
Sbjct: 172 IYLIDRDGN 180




15|Sequence|71|80|DVQGNITQKF

>sp|AGL11_HALVD|LOW-SALT glycan biosynthesis nucleotidyltransferase Agl11|Haloferax volcanii

Query: 1 DVQGNITQ 8
D QGN+TQ
Sbjct: 148 DDQGNVTQ 155


>sp|FEN_THEPD|FLAP endonuclease 1|Thermofilum pendens (strain DSM 2475

Query: 1 DVQGNIT 7
D QGN+T
Sbjct: 51 DAQGNVT 57


>sp|PURQ_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Thermococcus kodakarensis (strain ATCC

Query: 1 DVQGNITQK 9
D +GNIT++
Sbjct: 162 DEEGNITEE 170


>sp|G3P_META3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DVQGNI 6
D+QGNI
Sbjct: 67 DIQGNI 72




16|Sequence|76|85|ITQKFDVSPV

>sp|THIL_METKA|THIAMINE-MONOPHOSPHATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 ITQKFDVSPV 10
+ Q+FDV PV
Sbjct: 251 VAQEFDVDPV 260


>sp|HELS_PYRCJ|ATP-DEPENDENT DNA helicase Hel308|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ITQKFDVSP 9
I +KFDV+P
Sbjct: 585 IYEKFDVAP 593


>sp|PANE_PYRHO|2-DEHYDROPANTOATE 2-reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 KFDVSPV 10
KFD+SP+
Sbjct: 227 KFDISPM 233


>sp|TRET_PYRHO|TREHALOSE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ITQKFDVSP 9
I ++FDV P
Sbjct: 220 ILERFDVDP 228


>sp|Y069_ARCFU|UNCHARACTERIZED protein AF_0069|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ITQKFDVSPV 10
+ K+DV P+
Sbjct: 85 LVDKYDVKPI 94


>sp|METK_METJA|S-ADENOSYLMETHIONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ITQKFDVSPV 10
I +K DV P+
Sbjct: 5 IVKKLDVEPI 14




17|Sequence|81|90|DVSPVKINQI

>sp|RNZ_METM5|RIBONUCLEASE Z|Methanococcus maripaludis (strain C5 /

Query: 1 DVSPVKINQI 10
DVSP+KIN I
Sbjct: 47 DVSPMKINNI 56


>sp|RNZ_METM7|RIBONUCLEASE Z|Methanococcus maripaludis (strain C7 /

Query: 1 DVSPVKINQI 10
DVSP+KIN I
Sbjct: 47 DVSPMKINNI 56


>sp|RNZ_METMP|RIBONUCLEASE Z|Methanococcus maripaludis (strain DSM 14266

Query: 1 DVSPVKINQI 10
DVSP+KIN I
Sbjct: 47 DVSPMKINNI 56


>sp|RNZ_METM6|RIBONUCLEASE Z|Methanococcus maripaludis (strain C6 /

Query: 1 DVSPVKINQI 10
DVSP+KIN I
Sbjct: 47 DVSPMKINNI 56


>sp|RNZ_META3|RIBONUCLEASE Z|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DVSPVKINQI 10
D+SP+KIN I
Sbjct: 47 DISPMKINNI 56


>sp|RNZ_METVS|RIBONUCLEASE Z|Methanococcus vannielii (strain ATCC 35089

Query: 1 DVSPVKINQI 10
DVSP+KIN I
Sbjct: 47 DVSPMKINNI 56


>sp|RNZ_METJA|RIBONUCLEASE Z|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DVSPVKINQI 10
+VSP+KIN I
Sbjct: 50 EVSPMKINHI 59


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DVSPVKINQ 9
D+ P+KIN+
Sbjct: 705 DIGPIKINK 713


>sp|BGAL_SACSH|BETA-GALACTOSIDASE shibatae (strain ATCC 51178

Query: 1 DVSPVKINQ 9
DV+ V+INQ
Sbjct: 104 DVTEVEINQ 112


>sp|K6PF_THELI|ADP-SPECIFIC phosphofructokinase|Thermococcus litoralis

Query: 4 PVKINQI 10
PVKIN+I
Sbjct: 163 PVKINRI 169


>sp|NCPP_METAR|PROBABLE inosine/xanthosine triphosphatase|Methanocella arvoryzae (strain

Query: 2 VSPVKINQI 10
V+PVK+N +
Sbjct: 8 VNPVKVNAV 16


>sp|K6PF_THEZI|ADP-SPECIFIC phosphofructokinase|Thermococcus zilligii

Query: 4 PVKINQI 10
PVK+N+I
Sbjct: 164 PVKVNRI 170


>sp|K6PF_PYRAB|ADP-SPECIFIC phosphofructokinase|Pyrococcus abyssi (strain GE5 /

Query: 1 DVSPVKINQI 10
D P+KIN+I
Sbjct: 154 DEDPLKINRI 163


>sp|LYSK_SULAC|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DVSPVKIN 8
D+SPVK++
Sbjct: 256 DISPVKVD 263


>sp|MOAA_ARCFU|PROBABLE GTP 3',8-cyclase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VSPVKINQI 10
++PVKIN +
Sbjct: 146 LTPVKINML 154


>sp|K6PF_THEKO|ADP-SPECIFIC phosphofructokinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 PVKINQI 10
PVK+N+I
Sbjct: 164 PVKVNRI 170


>sp|MOAA_METAR|PROBABLE GTP 3',8-cyclase|Methanocella arvoryzae (strain DSM 22066

Query: 2 VSPVKINQI 10
++PVKIN +
Sbjct: 147 LTPVKINMV 155


>sp|CMR5_PYRFU|CRISPR system Cmr subunit Cmr5|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DVSPVKINQI 10
+ SP K NQI
Sbjct: 73 ETSPEKANQI 82


>sp|Y1418_SULTO|UPF0173 metal-dependent hydrolase STK_14180|Sulfurisphaera tokodaii

Query: 2 VSPVKIN 8
VSPVK+N
Sbjct: 32 VSPVKLN 38


>sp|MOAA_METTH|PROBABLE GTP 3',8-cyclase|Methanothermobacter thermautotrophicus (strain

Query: 2 VSPVKINQI 10
+ PVKIN +
Sbjct: 149 LDPVKINMV 157




18|Sequence|86|95|KINQISLDES

>sp|DPO4_METMJ|DNA polymerase IV|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KINQISLDES 10
+I Q+S+DE+
Sbjct: 103 RIEQVSIDEA 112


>sp|MFNF_METVA|(4- vannielii

Query: 2 INQISLDES 10
+NQIS DES
Sbjct: 123 LNQISADES 131


>sp|T1214_ARCFU|PROBABLE transposase for insertion sequence|Archaeoglobus fulgidus (strain

Query: 1 KINQISLDE 9
K+N ISLD+
Sbjct: 215 KVNSISLDK 223


>sp|FDHB_METJA|F420-DEPENDENT formate dehydrogenase subunit beta|Methanocaldococcus jannaschii

Query: 1 KINQISLD 8
K+NQI+LD
Sbjct: 106 KLNQINLD 113


>sp|RS12_METAR|SMALL ribosomal subunit protein uS12|Methanocella arvoryzae (strain DSM

Query: 1 KINQISLDE 9
K+N +SL+E
Sbjct: 123 KVNDVSLEE 131


>sp|CARB1_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 2 INQISLDES 10
INQ+ +DES
Sbjct: 198 INQVLIDES 206


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 2 INQISLDES 10
INQ+ +DES
Sbjct: 199 INQVLIDES 207


>sp|RS12_PYRHO|SMALL ribosomal subunit protein uS12|Pyrococcus horikoshii (strain ATCC

Query: 1 KINQISLDE 9
K+N++SL E
Sbjct: 128 KVNRVSLKE 136


>sp|RS12_PYRFU|SMALL ribosomal subunit protein uS12|Pyrococcus furiosus (strain ATCC

Query: 1 KINQISLDE 9
K+N++SL E
Sbjct: 128 KVNRVSLKE 136


>sp|RS12_PYRAB|SMALL ribosomal subunit protein uS12|Pyrococcus abyssi (strain GE5 /

Query: 1 KINQISLDE 9
K+N++SL E
Sbjct: 128 KVNRVSLKE 136


>sp|RS12_THEKO|SMALL ribosomal subunit protein uS12|Thermococcus kodakarensis (strain

Query: 1 KINQISLDE 9
K+N++SL E
Sbjct: 128 KVNRVSLKE 136


>sp|RS12_THECE|SMALL ribosomal subunit protein uS12|Thermococcus celer

Query: 1 KINQISLDE 9
K+N++SL E
Sbjct: 128 KVNRVSLKE 136


>sp|ARLY_SACS2|ARGININOSUCCINATE lyase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KINQISLDES 10
++N+I++DES
Sbjct: 336 QVNKINIDES 345


>sp|Y979_METVS|UPF0179 protein Mevan_0979|Methanococcus vannielii (strain ATCC 35089

Query: 1 KINQISLDES 10
K++ ISLDES
Sbjct: 137 KVSIISLDES 146


>sp|DPO42_METMA|DNA polymerase IV 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KINQISLDES 10
K Q+S+DE+
Sbjct: 112 KFQQVSVDEA 121


>sp|AMPPA_METHJ|AMP phosphorylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 INQISLDE 9
INQ+ +DE
Sbjct: 132 INQLDMDE 139




19|Sequence|91|100|SLDESGEHMG

>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 SLDESGEHM 9
+LDE+GE M
Sbjct: 598 TLDETGEKM 606


>sp|Y773_METJA|UNCHARACTERIZED protein MJ0773|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LDESGEHMG 10
D +GEH+G
Sbjct: 130 FDSNGEHLG 138


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SLDESGEHM 9
+LDE+GE M
Sbjct: 591 TLDETGEKM 599


>sp|YPZ6_METTF|UNCHARACTERIZED protein ORF6'|Methanothermobacter thermautotrophicus

Query: 1 SLDESGEH 8
+L+E+GEH
Sbjct: 86 ALEEAGEH 93


>sp|PRNK_METJA|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase MJ1315|Methanocaldococcus jannaschii (strain

Query: 2 LDESGEHMG 10
+DE+GE +G
Sbjct: 346 VDENGEELG 354


>sp|YPV6_METTF|UNCHARACTERIZED protein ORF6|Methanothermobacter thermautotrophicus

Query: 1 SLDESGEH 8
+L+E GEH
Sbjct: 86 ALEEGGEH 93


>sp|Y352_METJA|UNCHARACTERIZED protein MJ0352|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LDESGEHM 9
LDE+ EH+
Sbjct: 113 LDEANEHL 120


>sp|RS4E_THEKO|SMALL ribosomal subunit protein eS4|Thermococcus kodakarensis (strain

Query: 1 SLDESGEH 8
S+ E+GEH
Sbjct: 92 SIPETGEH 99


>sp|RS4E_PYRHO|SMALL ribosomal subunit protein eS4|Pyrococcus horikoshii (strain ATCC

Query: 1 SLDESGEH 8
S+ E+GEH
Sbjct: 92 SIPETGEH 99


>sp|RS4E_PYRFU|SMALL ribosomal subunit protein eS4|Pyrococcus furiosus (strain ATCC

Query: 1 SLDESGEH 8
S+ E+GEH
Sbjct: 92 SIPETGEH 99


>sp|RS4E_PYRAB|SMALL ribosomal subunit protein eS4|Pyrococcus abyssi (strain GE5 /

Query: 1 SLDESGEH 8
S+ E+GEH
Sbjct: 92 SIPETGEH 99


>sp|KAE1_METAR|TRNA N6-adenosine threonylcarbamoyltransferase|Methanocella arvoryzae

Query: 1 SLDESGEHMG 10
+LD+ G H+G
Sbjct: 157 ALDKFGRHLG 166




20|Sequence|96|105|GEHMGVCSED

>sp|TRMY_PYRAB|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus abyssi

Query: 1 GEHMGVCSED 10
G+H+G+ SED
Sbjct: 158 GDHIGLSSED 167


>sp|GATB_SULTO|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfurisphaera tokodaii (strain DSM

Query: 2 EHMGVCSED 10
EH+GVC+ D
Sbjct: 181 EHLGVCNCD 189


>sp|Y959_METJA|UNCHARACTERIZED aminotransferase MJ0959|Methanocaldococcus jannaschii (strain ATCC

Query: 3 HMGVCSE 9
HMG+C E
Sbjct: 343 HMGICGE 349


>sp|TRMY_THEKO|TRNA (pseudouridine(54)-N(1))-methyltransferase|Thermococcus

Query: 1 GEHMGVCSED 10
G+H+G+ ED
Sbjct: 155 GDHLGLSKED 164


>sp|GATB_SACS2|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 2 EHMGVC 7
EH+GVC
Sbjct: 180 EHLGVC 185


>sp|TRMY_METBU|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcoides

Query: 1 GEHMGVCSED 10
G+HMGV E+
Sbjct: 152 GDHMGVTEEE 161


>sp|TRMY_PYRHO|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus horikoshii

Query: 1 GEHMGVCSED 10
G+H+G+ ED
Sbjct: 157 GDHIGLSEED 166


>sp|LEUC2_METKA|3-ISOPROPYLMALATE dehydratase large subunit 2|Methanopyrus kandleri (strain AV19 /

Query: 1 GEHMGVCSED 10
GEH+GV +D
Sbjct: 346 GEHLGVLGDD 355


>sp|TRMY_META3|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus aeolicus

Query: 1 GEHMGVCSED 10
G+H+G+ ED
Sbjct: 157 GDHIGIGEED 166


>sp|TRMY_METVS|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus vannielii

Query: 1 GEHMGVCSED 10
G+H+G+ ED
Sbjct: 153 GDHIGLSKED 162


>sp|TRMY_METAC|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanosarcina

Query: 1 GEHMGVCSED 10
G+HMGV E+
Sbjct: 150 GDHMGVTEEE 159


>sp|TRMY_METJA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanocaldococcus

Query: 1 GEHMGVCSED 10
G+H+G+ ED
Sbjct: 156 GDHIGIGEED 165


>sp|TRMY_METMP|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 1 GEHMGVCSED 10
G+H+G+ ED
Sbjct: 155 GDHIGIGDED 164


>sp|TRMY_METM7|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 1 GEHMGVCSED 10
G+H+G+ ED
Sbjct: 153 GDHIGIGDED 162


>sp|Y1496_PYRFU|UPF0252 protein PF1496|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GEHMGVCSE 9
G +GVCS+
Sbjct: 211 GRRIGVCSD 219


>sp|EF2_METRM|ELONGATION factor 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 2 EHMGVCSED 10
E+MG C++D
Sbjct: 637 EYMGNCNKD 645


>sp|LEUC2_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 1 GEHMGVCSED 10
G HMGV ++
Sbjct: 325 GRHMGVAGDN 334


>sp|PIMT_PYRAR|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GEHMGVCSE 9
G H VC+E
Sbjct: 84 GYHAAVCAE 92


>sp|PIMT_PYRAE|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GEHMGVCSE 9
G H VC+E
Sbjct: 84 GYHAAVCAE 92


>sp|IDI2_METTH|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 GVCSED 10
G+CSED
Sbjct: 188 GICSED 193


>sp|PIMT_PYRCJ|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GEHMGVCSE 9
G H VC+E
Sbjct: 84 GYHAAVCAE 92


>sp|LEUC2_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GEHMGVCSE 9
G HMGV +
Sbjct: 325 GRHMGVVGD 333


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 GEHMGVCSE 9
G+ MG+C E
Sbjct: 624 GKIMGICIE 632


>sp|RPO2N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanocaldococcus jannaschii (strain

Query: 3 HMGVCSED 10
H+GV ED
Sbjct: 301 HLGVTKED 308


>sp|LEUC_PYRHO|3-ISOPROPYLMALATE dehydratase large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GEHMGV 6
G HMGV
Sbjct: 325 GRHMGV 330


>sp|LEUC_THEKO|3-ISOPROPYLMALATE dehydratase large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 GEHMGVCSE 9
G HMGV +
Sbjct: 325 GRHMGVAGD 333


>sp|CBID_METS3|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 3 HMGVCSED 10
H G+C D
Sbjct: 284 HAGICGAD 291


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina barkeri

Query: 4 MGVCSED 10
+GVC ED
Sbjct: 522 VGVCPED 528


>sp|LEUC1_METKA|3-ISOPROPYLMALATE dehydratase large subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 1 GEHMGVCSE 9
G HMGV +E
Sbjct: 363 GGHMGVLAE 371




21|Sequence|101|110|VCSEDGKVQV

>sp|AROC_METAR|CHORISMATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 2 CSEDGKVQ 9
C+EDGKV+
Sbjct: 267 CTEDGKVR 274


>sp|SYS_METLZ|SERINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 SEDGKVQV 10
+EDGKV++
Sbjct: 404 TEDGKVEI 411


>sp|APBC_SACS2|IRON-SULFUR cluster carrier protein|Saccharolobus solfataricus (strain ATCC

Query: 1 VCSEDGKV 8
VC DGKV
Sbjct: 221 VCPSDGKV 228


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SEDGKVQV 10
S+DG+VQ+
Sbjct: 607 SKDGRVQI 614


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 3 SEDGKVQV 10
+EDG VQV
Sbjct: 994 AEDGTVQV 1001


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 CSEDGKVQV 10
CSE G+V V
Sbjct: 415 CSECGRVHV 423


>sp|CBID_SULAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VCSEDGKVQ 9
V SEDGK+
Sbjct: 341 VISEDGKIM 349


>sp|METXA_METAC|HOMOSERINE O-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VCSEDGKVQ 9
V SEDGK++
Sbjct: 455 VISEDGKLE 463


>sp|COAD_METBF|PHOSPHOPANTETHEINE adenylyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 3 SEDGKVQV 10
+EDGKV +
Sbjct: 28 AEDGKVHI 35


>sp|TF2B1_SACS2|TRANSCRIPTION initiation factor IIB 1|Saccharolobus solfataricus (strain ATCC

Query: 1 VCSEDGKV 8
+CSE G+V
Sbjct: 30 ICSETGEV 37


>sp|ACDB_METTH|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanothermobacter

Query: 4 EDGKVQV 10
EDGKV+V
Sbjct: 45 EDGKVEV 51


>sp|GPI_THEKO|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VCSEDGKVQV 10
V EDG+V+V
Sbjct: 172 VIEEDGEVKV 181


>sp|TF2B_SACSH|TRANSCRIPTION initiation factor IIB|Saccharolobus shibatae (strain ATCC 51178

Query: 1 VCSEDGKV 8
+CSE G+V
Sbjct: 27 ICSETGEV 34


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VCSEDGKV 8
+CSE G+V
Sbjct: 172 ICSECGRV 179


>sp|SYP_THEAC|PROLINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VCSEDGKVQV 10
VC ++GK+ V
Sbjct: 448 VCGKNGKMAV 457


>sp|PUR7_ARCFU|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 3 SEDGKVQV 10
+EDGK++V
Sbjct: 216 NEDGKIEV 223


>sp|JAMM1_HALVD|DESAMPYLASE volcanii (strain ATCC 29605

Query: 1 VCSEDGKV 8
+CS DG++
Sbjct: 114 ICSPDGRM 121




22|Sequence|106|115|GKVQVFGLYS

>sp|FOLD_PYRAE|BIFUNCTIONAL protein FolD|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GKVQVFGLYS 10
G+V+++ LYS
Sbjct: 65 GEVEIYELYS 74


>sp|SEPS_METTH|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 KVQVFGLYS 10
+V FGLYS
Sbjct: 294 EVATFGLYS 302


>sp|Y817_ARCFU|UNCHARACTERIZED protein AF_0817|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GKVQVFGL 8
GK+Q FGL
Sbjct: 437 GKIQGFGL 444


>sp|Y1893_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 1 GKVQVFGL 8
G+V+VFGL
Sbjct: 65 GEVRVFGL 72


>sp|Y397_ARCFU|UNCHARACTERIZED protein AF_0397|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GKVQVFGLY 9
GK+++FG Y
Sbjct: 127 GKLELFGKY 135


>sp|SEPS_METKA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 KVQVFGLYS 10
++ FGLYS
Sbjct: 312 EIATFGLYS 320


>sp|UPPP_METM7|UNDECAPRENYL-DIPHOSPHATASE maripaludis (strain C7 /

Query: 1 GKVQVFGLY 9
GK+++FG Y
Sbjct: 229 GKLKIFGYY 237


>sp|UPPP_METMP|UNDECAPRENYL-DIPHOSPHATASE maripaludis (strain DSM 14266

Query: 1 GKVQVFGLY 9
GK+++FG Y
Sbjct: 229 GKLKIFGYY 237


>sp|UPPP_METM6|UNDECAPRENYL-DIPHOSPHATASE maripaludis (strain C6 /

Query: 1 GKVQVFGLY 9
GK+++FG Y
Sbjct: 229 GKLKIFGYY 237


>sp|Y1841_ARCFU|PUTATIVE ABC transporter ATP-binding protein|Archaeoglobus fulgidus

Query: 1 GKVQVFG 7
GK+++FG
Sbjct: 63 GKIRIFG 69


>sp|UPPP_METM5|UNDECAPRENYL-DIPHOSPHATASE maripaludis (strain C5 /

Query: 1 GKVQVFGLY 9
GK+++FG Y
Sbjct: 229 GKLKIFGYY 237


>sp|COBQ_METMA|PROBABLE cobyric acid synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GKVQVFGL 8
GKV +FG+
Sbjct: 320 GKVPIFGI 327




23|Sequence|111|120|FGLYSGEEFH

>sp|RS19_METMP|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain

Query: 1 FGLYSGEEF 9
FG+Y+G+EF
Sbjct: 110 FGIYNGKEF 118


>sp|RS19_METM7|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain C7

Query: 1 FGLYSGEEF 9
FG+Y+G+EF
Sbjct: 110 FGIYNGKEF 118


>sp|RS19_METM6|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain C6

Query: 1 FGLYSGEEF 9
FG+Y+G+EF
Sbjct: 110 FGIYNGKEF 118


>sp|RS19_METM5|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain C5

Query: 1 FGLYSGEEF 9
FG+Y+G+EF
Sbjct: 110 FGIYNGKEF 118


>sp|RS19_META3|SMALL ribosomal subunit protein uS19|Methanococcus aeolicus (strain ATCC

Query: 1 FGLYSGEEF 9
FG+Y+G+EF
Sbjct: 111 FGIYNGKEF 119


>sp|RS19_METST|SMALL ribosomal subunit protein uS19|Methanosphaera stadtmanae (strain

Query: 1 FGLYSGEEF 9
FG+Y+G+EF
Sbjct: 85 FGIYNGQEF 93


>sp|RS19_METJA|SMALL ribosomal subunit protein uS19|Methanocaldococcus jannaschii

Query: 1 FGLYSGEEF 9
FG+Y+G+EF
Sbjct: 101 FGVYNGKEF 109


>sp|GCST_HALMA|PROBABLE aminomethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 3 LYSGEEFH 10
L SG+EFH
Sbjct: 237 LLSGQEFH 244


>sp|RS19_METS3|SMALL ribosomal subunit protein uS19|Methanobrevibacter smithii (strain

Query: 1 FGLYSGEEF 9
FG+Y+G+ F
Sbjct: 85 FGIYNGQNF 93


>sp|RS19_METTH|SMALL ribosomal subunit protein uS19|Methanothermobacter

Query: 1 FGLYSGEEF 9
FG+++G+EF
Sbjct: 85 FGIHNGKEF 93


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GLYSGEEFH 10
G SGEE+H
Sbjct: 447 GKISGEEYH 455


>sp|RS19_SULAC|SMALL ribosomal subunit protein uS19|Sulfolobus acidocaldarius (strain

Query: 1 FGLYSGEEF 9
F +Y+G+EF
Sbjct: 88 FAVYNGKEF 96


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GLYSGEEFH 10
G SGEE+H
Sbjct: 451 GEISGEEYH 459


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GLYSGEEFH 10
G SGEE+H
Sbjct: 451 GKISGEEYH 459


>sp|HICDH_PYRHO|ISOCITRATE/HOMOISOCITRATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GLYSGE 7
GLYSGE
Sbjct: 116 GLYSGE 121


>sp|Y421_METJA|UNCHARACTERIZED protein MJ0421|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FGLYSGEEF 9
+G+YSGE+
Sbjct: 336 WGVYSGEDL 344


>sp|Y1739_ARCFU|UNCHARACTERIZED protein AF_1739|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FGLYSGEEF 9
FG Y GEE+
Sbjct: 269 FGHYLGEEY 277


>sp|RS19_HALSA|SMALL ribosomal subunit protein uS19|Halobacterium salinarum (strain

Query: 1 FGLYSGEEF 9
F +Y+G+EF
Sbjct: 89 FAVYTGQEF 97


>sp|RS19_HALS3|SMALL ribosomal subunit protein uS19|Halobacterium salinarum (strain

Query: 1 FGLYSGEEF 9
F +Y+G+EF
Sbjct: 89 FAVYTGQEF 97


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 5 SGEEFH 10
SGEE+H
Sbjct: 454 SGEEYH 459


>sp|DLHH_SACS2|PUTATIVE carboxymethylenebutenolidase|Saccharolobus solfataricus (strain

Query: 1 FGLYSGEE 8
GLY+GE+
Sbjct: 188 LGLYAGED 195


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 LYSGEEFH 10
+ SGEE+H
Sbjct: 309 MASGEEYH 316


>sp|PYRC_SULTO|DIHYDROOROTASE tokodaii (strain DSM 16993

Query: 1 FGLYSG 6
FG+YSG
Sbjct: 111 FGIYSG 116


>sp|IPK_THEAC|ISOPENTENYL phosphate kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FGLYSGEE 8
+G+YSG++
Sbjct: 138 YGIYSGDD 145


>sp|RS19_SULTO|SMALL ribosomal subunit protein uS19|Sulfurisphaera tokodaii (strain

Query: 1 FGLYSGEEF 9
F +Y+G+EF
Sbjct: 88 FAVYNGKEF 96


>sp|Y709_METJA|UNCHARACTERIZED transporter MJ0709|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FGLYSG 6
FG+YSG
Sbjct: 418 FGIYSG 423


>sp|SUDHA_PYRFU|SULFIDE dehydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GLYSGEEF 9
G+YS EF
Sbjct: 264 GIYSANEF 271


>sp|MALA_HALJT|ALPHA-AMYLASE MalA|Haloarcula japonica (strain ATCC 49778

Query: 3 LYSGEEF 9
LY+G+EF
Sbjct: 532 LYAGQEF 538


>sp|TRM56_METKA|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanopyrus kandleri (strain

Query: 3 LYSGEEFH 10
LY G+E H
Sbjct: 149 LYEGKELH 156


>sp|TRPC_METTM|INDOLE-3-GLYCEROL phosphate synthase|Methanothermobacter marburgensis (strain ATCC

Query: 4 YSGEEF 9
YSG+EF
Sbjct: 264 YSGDEF 269


>sp|MVK_ARCFU|MEVALONATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FGLYSGEE 8
FGL+ GE+
Sbjct: 259 FGLFKGEK 266


>sp|Y564_METTH|UNCHARACTERIZED protein MTH_564|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 FGLYSGEEF 9
F Y GE+F
Sbjct: 119 FDTYGGEDF 127


>sp|AROD_METKA|3-DEHYDROQUINATE dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 2 GLYSGEE 8
GLY G+E
Sbjct: 68 GLYKGDE 74


>sp|CBIA_METST|COBYRINATE a,c-diamide synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 YSGEEFH 10
Y G EFH
Sbjct: 384 YHGHEFH 390


>sp|RS19_METLZ|SMALL ribosomal subunit protein uS19|Methanocorpusculum labreanum

Query: 2 GLYSGEEF 9
+YSG+EF
Sbjct: 86 AIYSGKEF 93


>sp|DNAJ_HALWD|CHAPERONE protein DnaJ|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GLYSGEEF 9
G SGEEF
Sbjct: 317 GTQSGEEF 324


>sp|AATI_METJA|A-TYPE ATP synthase subunit I|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FGLYSGEEFH 10
G++SG EF
Sbjct: 192 IGIFSGSEFE 201




24|Sequence|116|125|GEEFHETFDC

>sp|GGR1_METKA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanopyrus kandleri (strain AV19 /

Query: 2 EEFHETFDC 10
EEF +TF+C
Sbjct: 325 EEFRDTFEC 333


>sp|Y2143_SULTO|UPF0284 protein STK_21430|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GEEFHETFD 9
GEEF +FD
Sbjct: 139 GEEFSNSFD 147


>sp|SUCC1_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit beta|Archaeoglobus fulgidus (strain

Query: 1 GEEFHETFD 9
GEEF + FD
Sbjct: 163 GEEFKQMFD 171


>sp|HEM1_METJA|GLUTAMYL-TRNA reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EEFHETFD 9
E+F+ETFD
Sbjct: 24 EKFYETFD 31


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GEEFHETFD 9
GEE HE+ D
Sbjct: 1014 GEELHESKD 1022


>sp|KDPB_HALSA|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 2 EEFHETFD 9
+EFH FD
Sbjct: 524 DEFHAEFD 531


>sp|KDPB_HALS3|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 2 EEFHETFD 9
+EFH FD
Sbjct: 524 DEFHAEFD 531


>sp|SYC_SACS2|CYSTEINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EEFHETFD 9
EEF+ T+D
Sbjct: 412 EEFYPTYD 419


>sp|TRUA_HALMA|TRNA pseudouridine synthase A|Haloarcula marismortui (strain ATCC 43049

Query: 2 EEFHETFD 9
E+FH T D
Sbjct: 97 EDFHATHD 104


>sp|Y612_METJA|PROBABLE arogenate/prephenate dehydrogenase|Methanocaldococcus jannaschii

Query: 2 EEFHETF 8
+E HETF
Sbjct: 241 KEIHETF 247


>sp|Y35K_HALSI|UNCHARACTERIZED 36 kDa protein|Halobacterium salinarum (Halobacterium halobium)

Query: 1 GEEFHETFD 9
GE+ H+ FD
Sbjct: 184 GEDAHQVFD 192


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 2 EEFHETFD 9
E++H+ FD
Sbjct: 558 EKYHDRFD 565


>sp|PURA_META3|ADENYLOSUCCINATE synthetase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GEEFHETFD 9
G E H+T D
Sbjct: 326 GPELHQTID 334


>sp|PURA_METJA|ADENYLOSUCCINATE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GEEFHETFD 9
G E H+T D
Sbjct: 332 GPEMHQTID 340


>sp|THII_METS3|PROBABLE tRNA sulfurtransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 GEEFHETFD 9
G + HE FD
Sbjct: 214 GPKVHENFD 222




25|Sequence|121|130|ETFDCPIKII

>sp|GPMI_HALSA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ETFDCPI 7
ETFDCP+
Sbjct: 295 ETFDCPV 301


>sp|KHSE_META3|HOMOSERINE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 ETFDCPI 7
ET+DCPI
Sbjct: 290 ETWDCPI 296


>sp|AGL14_HALVD|PROBABLE low-salt glycan biosynthesis reductase|Haloferax volcanii (strain

Query: 2 TFDCPI 7
TFDCP+
Sbjct: 37 TFDCPL 42


>sp|COFC_ARCPA|2-PHOSPHO-L-LACTATE guanylyltransferase|Archaeoglobus profundus (strain DSM 5631

Query: 2 TFDCPIKII 10
+FDC IKII
Sbjct: 42 SFDCDIKII 50


>sp|BUD32_PYRAB|KEOPS complex subunit Bud32|Pyrococcus abyssi (strain GE5 /

Query: 3 FDCPIKII 10
FD PIK+I
Sbjct: 22 FDYPIKVI 29


>sp|IF5A_THEKO|TRANSLATION initiation factor 5A|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ETFDCPIK 8
ETFD PI+
Sbjct: 95 ETFDVPIE 102


>sp|PYRC_AERPE|DIHYDROOROTASE pernix (strain ATCC 700893

Query: 1 ETFDCPIKII 10
E+FDC +I
Sbjct: 390 ESFDCAATVI 399


>sp|GPMI_NATPD|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ETFDCPI 7
ETFD P+
Sbjct: 291 ETFDLPV 297


>sp|GPMI_HALMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Haloarcula marismortui (strain ATCC 43049

Query: 1 ETFDCPI 7
ETFD P+
Sbjct: 305 ETFDLPV 311


>sp|TIAS_METAC|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina acetivorans

Query: 4 DCPIKII 10
DCP KII
Sbjct: 63 DCPEKII 69


>sp|Y1403_METJA|UNCHARACTERIZED protein MJ1403|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TFDCPIKII 10
TF+ P+K++
Sbjct: 347 TFEVPLKVV 355


>sp|PYRG_METHJ|CTP synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 DCPIKI 9
DCP++I
Sbjct: 428 DCPVEI 433


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ETFDCPIKI 9
+ F CP+++
Sbjct: 915 QAFGCPVEV 923


>sp|TIAS_METMA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina mazei (strain

Query: 4 DCPIKII 10
DCP K+I
Sbjct: 63 DCPEKVI 69


>sp|MCRA_METKA|METHYL-COENZYME M reductase I subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 TFDCPIKII 10
T+DC KII
Sbjct: 161 TWDCYAKII 169


>sp|MRE11_METAC|DNA double-strand break repair protein|Methanosarcina acetivorans

Query: 1 ETFDCPIKI 9
ETF P++I
Sbjct: 470 ETFRAPVRI 478




26|Sequence|126|135|PIKIIAVHPH

>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IKIIAVHPH 10
IKIIA HP
Sbjct: 93 IKIIATHPQ 101


>sp|COFC_ARCPA|2-PHOSPHO-L-LACTATE guanylyltransferase|Archaeoglobus profundus (strain DSM 5631

Query: 2 IKIIAVHP 9
IKII+ HP
Sbjct: 47 IKIISTHP 54


>sp|TRMBR_HALSA|HTH-TYPE sugar sensing transcriptional regulator|Halobacterium salinarum

Query: 1 PIKIIAVHP 9
P+KI+A+ P
Sbjct: 72 PMKIVALSP 80


>sp|Y155_ARCFU|UNCHARACTERIZED protein AF_0155|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PIKIIAVHP 9
P+KI+ VHP
Sbjct: 8 PVKIMLVHP 16


>sp|ATGT_SULTO|TRNA-GUANINE(15) transglycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PIKIIAVHPH 10
PI +I V+P+
Sbjct: 429 PINLIEVYPY 438


>sp|SUCC_DESA1|SUCCINATE--COA ligase [ADP-forming] subunit beta|Desulfurococcus amylolyticus

Query: 2 IKIIAVHP 9
+KI+ HP
Sbjct: 294 VKIVVTHP 301


>sp|ILVD_METMP|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain DSM 14266

Query: 2 IKIIAVHP 9
+KI AVHP
Sbjct: 385 VKIGAVHP 392


>sp|LEU1_SULAC|2-ISOPROPYLMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 KIIAVHPH 10
KI++VH H
Sbjct: 198 KIVSVHCH 205




27|Sequence|131|140|AVHPHFVRSS

>sp|ARAT1_THELN|AROMATIC-AMINO-ACID aminotransferase 1|Thermococcus litoralis (strain ATCC 51850

Query: 1 AVHPHFVR 8
A PHF+R
Sbjct: 270 AAEPHFIR 277


>sp|COFH_METPE|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanosphaerula palustris (strain ATCC

Query: 1 AVHPHFVRSS 10
+HPHF S
Sbjct: 116 GLHPHFTAES 125


>sp|RS8E_METTH|SMALL ribosomal subunit protein eS8|Methanothermobacter

Query: 3 HPHFVR 8
+PHFVR
Sbjct: 86 NPHFVR 91


>sp|HIS7_CALMQ|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 PHFVRS 9
PHF+RS
Sbjct: 135 PHFIRS 140


>sp|CUTA_SULAC|GLYCERALDEHYDE dehydrogenase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 4 PHFVRS 9
PHF RS
Sbjct: 218 PHFARS 223


>sp|COBS2_ARCFU|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PHFVRS 9
PHF+R+
Sbjct: 45 PHFIRN 50


>sp|Y1607_METJA|UNCHARACTERIZED glycosyltransferase MJ1607|Methanocaldococcus jannaschii (strain

Query: 3 HPHFV 7
HPHF+
Sbjct: 64 HPHFL 68


>sp|HIS7_PYRAE|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PHFVRS 9
PHFVR+
Sbjct: 131 PHFVRT 136


>sp|HIS7_PYRAR|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 PHFVRS 9
PHFVR+
Sbjct: 130 PHFVRT 135


>sp|RL3_METMJ|LARGE ribosomal subunit protein uL3|Methanoculleus marisnigri (strain

Query: 3 HPHFVR 8
HPH VR
Sbjct: 242 HPHHVR 247


>sp|DAPF_METKA|DIAMINOPIMELATE epimerase|Methanopyrus kandleri (strain AV19 /

Query: 4 PHFVR 8
PHFVR
Sbjct: 135 PHFVR 139




28|Sequence|136|145|FVRSSCKQFV

>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FVRSSCKQ 8
FVR CK+
Sbjct: 15 FVRKKCKK 22


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 FVRSSCKQ 8
F+R CK+
Sbjct: 17 FIRKQCKE 24


>sp|AGLC_METVO|DOLICHYL N-acetyl-alpha-D-glucosaminyl phosphate

Query: 1 FVRSSCKQFV 10
+ RSS K+F+
Sbjct: 216 YTRSSVKKFI 225




29|Sequence|141|150|CKQFVTGGKK

>sp|Y021_METJA|PUTATIVE glycyl-radical enzyme activating enzyme|Methanocaldococcus

Query: 1 CKQFVTGGK 9
CKQ V GGK
Sbjct: 21 CKQCVKGGK 29


>sp|CAS1_PYRHO|CRISPR-ASSOCIATED endonuclease Cas1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KQFVTGGKK 10
K FVTGG K
Sbjct: 106 KSFVTGGTK 114


>sp|Y182_METKA|PUTATIVE ABC transporter ATP-binding protein|Methanopyrus kandleri (strain

Query: 3 QFVTGGKK 10
QF++GG+K
Sbjct: 127 QFLSGGQK 134


>sp|GLNA_SACS2|GLUTAMINE synthetase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 CKQFVTGGK 9
CK F GGK
Sbjct: 92 CKVFWGGGK 100


>sp|CCA_METMA|CCA-ADDING enzyme|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KQFVTGGK 9
KQF+ GG+
Sbjct: 167 KQFMRGGR 174


>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 4 FVTGGKK 10
FVT GKK
Sbjct: 485 FVTDGKK 491


>sp|TBP_HALMA|TATA-BOX-BINDING protein|Haloarcula marismortui (strain ATCC 43049

Query: 2 KQFVTGGKK 10
K VTGGK+
Sbjct: 156 KLVVTGGKR 164


>sp|RS4E_THEVO|SMALL ribosomal subunit protein eS4|Thermoplasma volcanium (strain ATCC

Query: 2 KQFVTGG 8
K F+TGG
Sbjct: 174 KAFITGG 180


>sp|PMK_SACS2|PHOSPHOMEVALONATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KQFVTGGKK 10
K+F+ GKK
Sbjct: 89 KEFIIDGKK 97


>sp|TBP_ARCFU|TATA-BOX-BINDING protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KQFVTGGK 9
K VTGGK
Sbjct: 154 KMVVTGGK 161




30|Sequence|146|155|TGGKKLLLFE

>sp|PGK_SACS2|PHOSPHOGLYCERATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TGGKKLLLF 9
TGG LLLF
Sbjct: 379 TGGGALLLF 387


>sp|PGK_SULTO|PHOSPHOGLYCERATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TGGKKLLLF 9
TGG LLLF
Sbjct: 384 TGGGALLLF 392


>sp|Y810_PYRAR|UPF0173 metal-dependent hydrolase Pars_0810|Pyrobaculum arsenaticum

Query: 1 TGGKKLLL 8
TGG KLL+
Sbjct: 15 TGGAKLLI 22


>sp|FAEHP_METAR|BIFUNCTIONAL enzyme Fae/Hps|Methanocella arvoryzae (strain DSM 22066

Query: 2 GGKKLLL 8
GGKKLL+
Sbjct: 331 GGKKLLV 337


>sp|PGK_SULAC|PHOSPHOGLYCERATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TGGKKLLLF 9
TGG LLLF
Sbjct: 384 TGGGALLLF 392


>sp|PGK_METS5|PHOSPHOGLYCERATE kinase|Metallosphaera sedula (strain ATCC 51363

Query: 1 TGGKKLLLF 9
TGG LLLF
Sbjct: 377 TGGGALLLF 385


>sp|MCRY_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GGKKLLL 8
GGK+LLL
Sbjct: 108 GGKQLLL 114




31|Sequence|151|160|LLLFERSWMN

>sp|AKSA_METJA|HOMOCITRATE synthase AksA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LLFERSW 8
LFE SW
Sbjct: 11 FLFENSW 17


>sp|SYY_PICTO|TYROSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 LFERSWM 9
LF+R+W+
Sbjct: 90 LFKRAWL 96


>sp|RPO6_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo6|Sulfurisphaera tokodaii (strain DSM

Query: 3 LFERSWMN 10
+FE SW N
Sbjct: 6 IFEESWKN 13


>sp|SEPS_METTH|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 FERSWM 9
FER+W+
Sbjct: 14 FERAWL 19


>sp|AMYA_PYRHO|ALPHA-AMYLASE horikoshii (strain ATCC 700860

Query: 2 LLFERSWMN 10
L++ER W+
Sbjct: 227 LVYERGWLK 235




32|Sequence|156|165|RSWMNRWKSA

>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 RSWMNRWKSA 10
R W +RW+ A
Sbjct: 5 RKWRDRWRDA 14


>sp|RL1_STAMF|LARGE ribosomal subunit protein uL1|Staphylothermus marinus (strain ATCC

Query: 2 SWMNRWKSA 10
S MNR+KSA
Sbjct: 143 SVMNRYKSA 151


>sp|Y536_METFV|UPF0104 membrane protein Mfer_0536|Methanothermus fervidus (strain ATCC

Query: 3 WMNRWKSA 10
WM RW+ A
Sbjct: 55 WMVRWRIA 62


>sp|IF2G_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 RSWMNRWK 8
R MNRW+
Sbjct: 393 RRVMNRWR 400


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RSWMNRWKSA 10
+ W RW+ A
Sbjct: 12 KKWQKRWEEA 21


>sp|RF1_METMA|PEPTIDE chain release factor subunit|Methanosarcina mazei (strain ATCC

Query: 3 WMNRWK 8
W RWK
Sbjct: 339 WTRRWK 344


>sp|RF11_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 3 WMNRWK 8
W RWK
Sbjct: 339 WTRRWK 344


>sp|PURP_NITMS|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 WMNRWKS 9
W+ RW+S
Sbjct: 99 WILRWES 105


>sp|PURP_CENSY|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Cenarchaeum symbiosum (strain A)

Query: 3 WMNRWKS 9
W+ RW+S
Sbjct: 99 WILRWES 105


>sp|RFCL_METBF|REPLICATION factor C large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 RSWMNRWKSA 10
R+W +W S
Sbjct: 30 RTWAEKWLSG 39


>sp|PTH_PYRAE|PEPTIDYL-TRNA hydrolase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RSWMNRW 7
R W+++W
Sbjct: 42 RKWLDQW 48


>sp|PTH_SACS2|PEPTIDYL-TRNA hydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RSWMNRW 7
+ W+N W
Sbjct: 43 KEWLNEW 49


>sp|PTH_SACI7|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 RSWMNRW 7
+ W+N W
Sbjct: 43 KEWLNEW 49


>sp|PTH_SACI6|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 RSWMNRW 7
+ W+N W
Sbjct: 43 KEWLNEW 49


>sp|PTH_SACI4|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 RSWMNRW 7
+ W+N W
Sbjct: 43 KEWLNEW 49


>sp|PTH_SACI3|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 RSWMNRW 7
+ W+N W
Sbjct: 43 KEWLNEW 49


>sp|PTH_SACI2|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 RSWMNRW 7
+ W+N W
Sbjct: 43 KEWLNEW 49


>sp|PTH_SACI1|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 RSWMNRW 7
+ W+N W
Sbjct: 43 KEWLNEW 49


>sp|SYL_PYRNV|LEUCINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 WMNRWKSA 10
W RW+ A
Sbjct: 15 WQRRWREA 22


>sp|SYL_PYRAR|LEUCINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 SWMNRW 7
+W++RW
Sbjct: 709 TWLDRW 714


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 WMNRWKSA 10
W RWK +
Sbjct: 15 WQKRWKES 22


>sp|SYC_METVS|CYSTEINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 RSWMNRW 7
++W+N W
Sbjct: 247 KNWVNYW 253




33|Sequence|161|170|RWKSAVLHEG

>sp|SFSA_PYRFU|SUGAR fermentation stimulation protein homolog|Pyrococcus furiosus

Query: 3 KSAVLHEG 10
KSAVL EG
Sbjct: 132 KSAVLREG 139


>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 2 WKSAVLHEG 10
W+ LHEG
Sbjct: 200 WRPTDLHEG 208


>sp|Y1485_METJA|UNCHARACTERIZED cation transporter MJ1485|Methanocaldococcus jannaschii (strain

Query: 3 KSAVLHE 9
KSAV+HE
Sbjct: 364 KSAVIHE 370


>sp|Y142_AERPE|UNCHARACTERIZED HTH-type transcriptional regulator APE_0142|Aeropyrum pernix

Query: 2 WKSAVL 7
WKSA+L
Sbjct: 92 WKSAIL 97


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 RWKSAVLHE 9
+W++ +LH+
Sbjct: 572 KWENVILHK 580


>sp|OFOB2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 3 KSAVLHEG 10
K A+LH+G
Sbjct: 180 KKAILHKG 187


>sp|DADD_METJA|5'-DEOXYADENOSINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 SAVLHEG 10
SA+LH+G
Sbjct: 309 SAILHKG 315


>sp|DNLI_METVS|DNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 RWKSAVLHEG 10
+W ++ HEG
Sbjct: 408 KWSLSIGHEG 417




34|Sequence|166|175|VLHEGEGNIR

>sp|PRIS_METB6|DNA primase small subunit PriS|Methanoregula boonei (strain DSM 21154

Query: 1 VLHEGEGNIR 10
V+HE EG R
Sbjct: 261 VVHETEGEFR 270


>sp|RS9_METKA|SMALL ribosomal subunit protein uS9|Methanopyrus kandleri (strain AV19

Query: 1 VLHEGEGNIR 10
V+ EGEG +R
Sbjct: 19 VIREGEGRVR 28


>sp|HPPA1_METMA|K(+)-STIMULATED pyrophosphate-energized sodium pump|Methanosarcina mazei (strain

Query: 1 VLHEGEGN 8
V +EGEGN
Sbjct: 26 VRNEGEGN 33


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 VLHEGEGN 8
V+HE EGN
Sbjct: 571 VVHECEGN 578


>sp|RL3_THEON|LARGE ribosomal subunit protein uL3|Thermococcus onnurineus (strain NA1)

Query: 1 VLHEGE 6
VLHEGE
Sbjct: 192 VLHEGE 197


>sp|RL3_THEKO|LARGE ribosomal subunit protein uL3|Thermococcus kodakarensis (strain

Query: 1 VLHEGE 6
VLHEGE
Sbjct: 192 VLHEGE 197


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 HEGEGNI 9
HEG GN+
Sbjct: 264 HEGVGNL 270


>sp|RS24_THEKO|SMALL ribosomal subunit protein eS24|Thermococcus kodakarensis (strain

Query: 1 VLHEGE 6
VLHEGE
Sbjct: 23 VLHEGE 28


>sp|RL3_THEGJ|LARGE ribosomal subunit protein uL3|Thermococcus gammatolerans (strain

Query: 1 VLHEGE 6
VLHEGE
Sbjct: 192 VLHEGE 197


>sp|FAU1_IGNH4|PROBABLE ribonuclease FAU-1|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 GEGNIR 10
GEGN+R
Sbjct: 401 GEGNVR 406


>sp|DNLI_METHJ|DNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 GEGNIR 10
GEGN+R
Sbjct: 167 GEGNLR 172


>sp|DNLI_METMJ|DNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 GEGNIR 10
GEGN+R
Sbjct: 167 GEGNVR 172


>sp|DLDH3_HALMA|DIHYDROLIPOYL dehydrogenase 3|Haloarcula marismortui (strain ATCC 43049

Query: 1 VLHEGEG 7
++H+GEG
Sbjct: 128 IIHQGEG 134


>sp|LONB_THEVO|ARCHAEAL Lon protease|Thermoplasma volcanium (strain ATCC 51530

Query: 3 HEGEGNI 9
H+G GNI
Sbjct: 470 HKGAGNI 476


>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 HEGEGNI 9
H+G GNI
Sbjct: 470 HKGAGNI 476


>sp|DHQS_NITMS|3-DEHYDROQUINATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 VLHEGEG 7
+LH+GEG
Sbjct: 198 MLHKGEG 204




35|Sequence|171|180|EGNIRSVKWR

>sp|Y1637_METJA|UNCHARACTERIZED protein MJ1637|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EGNIRSVKWR 10
EGNI + W+
Sbjct: 458 EGNILYIPWK 467


>sp|SYP_METS3|PROLINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 EGNIRSVKW 9
EGN+ +V W
Sbjct: 412 EGNVVAVNW 420


>sp|IDH_CALNO|ISOCITRATE dehydrogenase [NADP]|Caldococcus noboribetus

Query: 3 NIRSVKW 9
N+R VKW
Sbjct: 131 NVRPVKW 137


>sp|Y1681_THEKO|UPF0282 protein TK1681|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 NIRSVKW 9
N RSVKW
Sbjct: 190 NRRSVKW 196


>sp|Y1062_METJA|UNCHARACTERIZED protein MJ1062|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EGNIRSVK 8
E NIRS+K
Sbjct: 453 ENNIRSIK 460


>sp|PRNK_THEKO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase TK1956|Thermococcus kodakarensis (strain ATCC

Query: 3 NIRSVKWR 10
N+R+ KWR
Sbjct: 197 NLRAEKWR 204


>sp|NADE_PICTO|NH(3)-DEPENDENT NAD(+) synthetase|Picrophilus torridus (strain ATCC 700027

Query: 1 EGNIRS 6
EGNIRS
Sbjct: 104 EGNIRS 109


>sp|Y1470_METJA|UNCHARACTERIZED protein MJ1470|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EGNIRSVKW 9
+GN+ + KW
Sbjct: 336 KGNLDNTKW 344


>sp|GLMM_THEGJ|PROBABLE phosphoglucosamine mutase|Thermococcus gammatolerans (strain DSM

Query: 2 GNIRSVKW 9
GN R V W
Sbjct: 130 GNFRKVPW 137




36|Sequence|176|185|SVKWRGHLIA

>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VKWRGH 7
V+WRGH
Sbjct: 107 VRWRGH 112


>sp|CAS1B_METRM|CRISPR-ASSOCIATED protein Cas1 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 SVKWRGHL 8
S+ W+GH+
Sbjct: 64 SINWKGHV 71


>sp|Y819_PYRHO|UNCHARACTERIZED methyltransferase PH0819|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KWRGHLI 9
+WRGH +
Sbjct: 218 RWRGHSV 224


>sp|R15PI_ARCFU|RIBOSE 1,5-bisphosphate isomerase|Archaeoglobus fulgidus (strain ATCC

Query: 3 KWRGHL 8
+W+GHL
Sbjct: 150 RWQGHL 155


>sp|Y1382_METJA|UPF0310 protein MJ1382|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KWRGHLIA 10
KW GHL+
Sbjct: 120 KWSGHLMG 127


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 SVKWRGHLIA 10
S++ RGHL+A
Sbjct: 545 SLQKRGHLVA 554


>sp|Y474_KORCO|UPF0310 protein Kcr_0474|Korarchaeum cryptofilum (strain OPF8)

Query: 3 KWRGHLIA 10
KW GHL+
Sbjct: 121 KWTGHLMG 128


>sp|Y2356_ARCFU|UPF0310 protein AF_2356|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KWRGHLIA 10
KW GHL+
Sbjct: 121 KWSGHLMG 128


>sp|GLYA_PYRFU|SERINE hydroxymethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KWRGHLI 9
KWR H I
Sbjct: 19 KWRSHTI 25


>sp|Y875_PYRAB|UPF0310 protein PYRAB08750|Pyrococcus abyssi (strain GE5 /

Query: 3 KWRGHLIA 10
KW GHL+
Sbjct: 117 KWSGHLMG 124


>sp|GLYA_PYRHO|SERINE hydroxymethyltransferase|Pyrococcus horikoshii (strain ATCC

Query: 3 KWRGHLI 9
KWR H I
Sbjct: 19 KWRSHTI 25


>sp|GLYA_PYRAB|SERINE hydroxymethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 KWRGHLI 9
KWR H I
Sbjct: 19 KWRSHTI 25


>sp|FSX1_HALSH|FUSEXIN 1|Haloplanus natans (strain DSM 17983

Query: 2 VKWRGHL 8
VKW+G+L
Sbjct: 224 VKWQGNL 230


>sp|AMPPA_METJA|AMP phosphorylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VKWRGHL 8
V W GH+
Sbjct: 154 VNWEGHI 160


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VKWRGHLIA 10
+KWRG ++
Sbjct: 336 LKWRGEVVG 344


>sp|Y3536_METJA|UPF0310 protein MJECL36|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KWRGHLIA 10
+W GHL+
Sbjct: 120 RWSGHLMG 127


>sp|PURL_PYRCJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 KWRGHLIA 10
KWRG ++
Sbjct: 335 KWRGEVVG 342


>sp|Y2160_PYRAE|UPF0173 metal-dependent hydrolase PAE2160|Pyrobaculum aerophilum

Query: 2 VKWRGH 7
+KW GH
Sbjct: 3 IKWFGH 8


>sp|Y1074_PYRCJ|UPF0173 metal-dependent hydrolase Pcal_1074|Pyrobaculum calidifontis

Query: 2 VKWRGH 7
+KW GH
Sbjct: 3 IKWFGH 8


>sp|SYS_IGNH4|SERINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 WRGHL 8
W+GHL
Sbjct: 134 WKGHL 138


>sp|SYS_PYRHO|SERINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 WRGHL 8
W+GHL
Sbjct: 135 WKGHL 139


>sp|SYS_PYRFU|SERINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 WRGHL 8
W+GHL
Sbjct: 135 WKGHL 139


>sp|Y790_METJA|UNCHARACTERIZED protein MJ0790|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VKWRGHLI 9
+ W+GH I
Sbjct: 1 MNWKGHTI 8




37|Sequence|181|190|GHLIAWANNM

>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HLIAWANN 9
HLIAW N
Sbjct: 570 HLIAWYAN 577


>sp|SYR_PYRAB|ARGININE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 HLIAWANN 9
HLIAW N
Sbjct: 566 HLIAWYAN 573


>sp|PGK_METBR|PHOSPHOGLYCERATE kinase|Methanobacterium bryantii

Query: 1 GHLIAWANNM 10
GHL A AN M
Sbjct: 360 GHLAAAANQM 369


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HLIAWANN 9
HLIAW N
Sbjct: 570 HLIAWFAN 577


>sp|DHE4_SACSH|NADP-SPECIFIC glutamate dehydrogenase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 GHLIAWANN 9
G + WANN
Sbjct: 354 GSYVEWANN 362


>sp|DHE2_SACS2|GLUTAMATE dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GHLIAWANN 9
G + WANN
Sbjct: 351 GSYVEWANN 359


>sp|KCY_STAMF|CYTIDYLATE kinase|Staphylothermus marinus (strain ATCC 43588

Query: 1 GHLIAW 6
GHL AW
Sbjct: 81 GHLTAW 86


>sp|KCY_PYRCJ|CYTIDYLATE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GHLIAW 6
GHL AW
Sbjct: 81 GHLTAW 86


>sp|KCY_PYRAR|CYTIDYLATE kinase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GHLIAW 6
GHL AW
Sbjct: 81 GHLTAW 86


>sp|KCY_PYRAE|CYTIDYLATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GHLIAW 6
GHL AW
Sbjct: 81 GHLTAW 86


>sp|SFSA_AERPE|SUGAR fermentation stimulation protein homolog|Aeropyrum pernix (strain

Query: 1 GHLIAWANNM 10
G LIAW N +
Sbjct: 51 GVLIAWLNRL 60


>sp|QUEE_PYRAE|7-CARBOXY-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HLIAWAN 8
H++AW N
Sbjct: 212 HIMAWGN 218


>sp|KCY_PYRNV|CYTIDYLATE kinase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GHLIAW 6
GHL AW
Sbjct: 81 GHLAAW 86


>sp|KCY_PYRIL|CYTIDYLATE kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GHLIAW 6
GHL AW
Sbjct: 81 GHLAAW 86


>sp|KCY_DESA1|CYTIDYLATE kinase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 GHLIAW 6
GHL AW
Sbjct: 82 GHLAAW 87


>sp|SRP54_SACI7|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 3 LIAWANNM 10
L+ W NNM
Sbjct: 417 LLEWYNNM 424


>sp|SRP54_SACI6|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain M.16.4

Query: 3 LIAWANNM 10
L+ W NNM
Sbjct: 417 LLEWYNNM 424


>sp|SRP54_SACI4|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 3 LIAWANNM 10
L+ W NNM
Sbjct: 417 LLEWYNNM 424


>sp|SRP54_SACI3|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 3 LIAWANNM 10
L+ W NNM
Sbjct: 417 LLEWYNNM 424


>sp|SRP54_SACI2|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 3 LIAWANNM 10
L+ W NNM
Sbjct: 417 LLEWYNNM 424


>sp|SRP54_SACI1|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 3 LIAWANNM 10
L+ W NNM
Sbjct: 417 LLEWYNNM 424


>sp|ARLY_METST|ARGININOSUCCINATE lyase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 HLIAWANNM 10
HL+A+AN +
Sbjct: 166 HLMAYANEL 174


>sp|ARLY_METM7|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C7 /

Query: 1 GHLIAWANNM 10
GHLI NM
Sbjct: 130 GHLITMEQNM 139


>sp|ARLY_METMP|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GHLIAWANNM 10
GHLI NM
Sbjct: 130 GHLITMEKNM 139


>sp|THIC_METM7|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 GHLIAW 6
GH IAW
Sbjct: 360 GHSIAW 365


>sp|THIC_METM5|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 GHLIAW 6
GH IAW
Sbjct: 360 GHSIAW 365


>sp|RIB7_SACS2|2,5-DIAMINO-6-RIBOSYLAMINO-4(3H)-PYRIMIDINONE 5'-phosphate reductase|Saccharolobus solfataricus (strain ATCC

Query: 1 GHLIAW 6
GHLI W
Sbjct: 146 GHLIWW 151


>sp|GLNA_METVO|GLUTAMINE synthetase|Methanococcus voltae

Query: 4 IAWANN 9
IAWAN+
Sbjct: 312 IAWANS 317


>sp|GLNA_METMP|GLUTAMINE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 4 IAWANN 9
IAWAN+
Sbjct: 312 IAWANS 317


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GHLIAW 6
GHL+ W
Sbjct: 217 GHLVIW 222


>sp|Y1680_ARCFU|UNCHARACTERIZED protein AF_1680|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GHLIAWA 7
H++AWA
Sbjct: 89 AHVLAWA 95


>sp|PSTS_METJA|PHOSPHATE-BINDING protein PstS|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HLIAWAN 8
HL+ W N
Sbjct: 328 HLLVWEN 334


>sp|HTR2_HALSA|SENSORY rhodopsin II transducer|Halobacterium salinarum (strain ATCC

Query: 2 HLIAWANN 9
HL AW +N
Sbjct: 61 HLDAWLSN 68


>sp|HTR2_HALS3|SENSORY rhodopsin II transducer|Halobacterium salinarum (strain ATCC

Query: 2 HLIAWANN 9
HL AW +N
Sbjct: 61 HLDAWLSN 68




38|Sequence|186|195|WANNMGVKIF

>sp|RFRNP_THEON|RNA-FREE ribonuclease P|Thermococcus onnurineus (strain NA1)

Query: 1 WANNMGVK 8
WA MG+K
Sbjct: 168 WAQKMGIK 175


>sp|RFRNP_THEKO|RNA-FREE ribonuclease P|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WANNMGVK 8
WA MG+K
Sbjct: 168 WAQKMGIK 175


>sp|DMO1_DESMO|HOMING endonuclease I-DmoI|Desulfurococcus mucosus (Desulfurococcus

Query: 1 WANNMGVK 8
W NN+GV+
Sbjct: 141 WLNNLGVR 148


>sp|RFRNP_PYRHO|RNA-FREE ribonuclease P|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WANNMGVK 8
WA MG+K
Sbjct: 169 WAEKMGIK 176


>sp|RFRNP_PYRFU|RNA-FREE ribonuclease P|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WANNMGVK 8
WA MG+K
Sbjct: 167 WAEKMGIK 174


>sp|RFRNP_PYRAB|RNA-FREE ribonuclease P|Pyrococcus abyssi (strain GE5 /

Query: 1 WANNMGVK 8
WA MG+K
Sbjct: 169 WAEKMGIK 176


>sp|SYW_METTH|TRYPTOPHAN--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 WANNMGVKIF 10
W + MG +IF
Sbjct: 87 WYDRMGAEIF 96


>sp|RF1_SACS2|PEPTIDE chain release factor subunit|Saccharolobus solfataricus (strain

Query: 2 ANNMGVKIF 10
A N GVK+F
Sbjct: 333 AENYGVKVF 341


>sp|RL32_METVS|LARGE ribosomal subunit protein eL32|Methanococcus vannielii (strain ATCC

Query: 2 ANNMGVKIF 10
AN +G+++F
Sbjct: 114 ANELGIRVF 122


>sp|RL32_METVA|LARGE ribosomal subunit protein eL32|Methanococcus vannielii

Query: 2 ANNMGVKIF 10
AN +G+++F
Sbjct: 114 ANELGIRVF 122


>sp|DPOL3_SACSH|DNA polymerase 3|Saccharolobus shibatae (strain ATCC 51178

Query: 2 ANNMGVKI 9
AN++GVKI
Sbjct: 247 ANSLGVKI 254


>sp|RL32_METM5|LARGE ribosomal subunit protein eL32|Methanococcus maripaludis (strain C5

Query: 2 ANNMGVKIF 10
AN +G+++F
Sbjct: 114 ANELGIRVF 122


>sp|RL32_METM7|LARGE ribosomal subunit protein eL32|Methanococcus maripaludis (strain C7

Query: 2 ANNMGVKIF 10
AN +G+++F
Sbjct: 114 ANELGIRVF 122


>sp|CHMU_METJA|CHORISMATE mutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NMGVKIF 10
N+G+KIF
Sbjct: 69 NIGIKIF 75


>sp|RL32_METM6|LARGE ribosomal subunit protein eL32|Methanococcus maripaludis (strain C6

Query: 2 ANNMGVKIF 10
AN +G+++F
Sbjct: 114 ANELGIRVF 122


>sp|RL32_METMP|LARGE ribosomal subunit protein eL32|Methanococcus maripaludis (strain

Query: 2 ANNMGVKIF 10
AN +G+++F
Sbjct: 114 ANELGIRVF 122


>sp|PSTB_AERPE|PHOSPHATE import ATP-binding protein PstB|Aeropyrum pernix (strain ATCC

Query: 1 WANNMGV 7
W NNM V
Sbjct: 68 WINNMNV 74


>sp|RL32_PICTO|LARGE ribosomal subunit protein eL32|Picrophilus torridus (strain ATCC

Query: 2 ANNMGVKIF 10
A+N+G+ +F
Sbjct: 121 ADNLGIHVF 129


>sp|SYH_METM5|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 WANNMGVK 8
+ANN G+K
Sbjct: 375 YANNKGIK 382


>sp|UPPS_METJA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanocaldococcus

Query: 1 WANNMGVKI 9
WA ++G+ +
Sbjct: 87 WARDLGINV 95


>sp|TTH_ACIAM|TETRATHIONATE hydrolase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 WANNMGVK 8
WA +GVK
Sbjct: 128 WAQQLGVK 135


>sp|ARFB_METIM|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanocaldococcus infernus (strain

Query: 1 WANNMGVK 8
WA +G+K
Sbjct: 93 WAKRIGIK 100




39|Sequence|191|200|GVKIFDIISK

>sp|Y674_METJA|UNCHARACTERIZED protein MJ0674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KIFDIISK 10
KIFD ISK
Sbjct: 280 KIFDFISK 287


>sp|RS4E_METHJ|SMALL ribosomal subunit protein eS4|Methanospirillum hungatei JF-1

Query: 1 GVKIFDIIS 9
G+ IFDI+S
Sbjct: 78 GIGIFDIVS 86


>sp|Y1387_METJA|PUTATIVE nickel insertion protein|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GVKIFDI 7
GV+IFDI
Sbjct: 308 GVRIFDI 314


>sp|THI4_PYRAB|THIAMINE thiazole synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 GVKIFDII 8
GVKIF++I
Sbjct: 117 GVKIFNMI 124


>sp|DNLI_IGNH4|DNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 VKIFDII 8
VK+FDII
Sbjct: 346 VKLFDII 352


>sp|NTPTH_THEAC|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GVKIFDI 7
GV++FDI
Sbjct: 155 GVRVFDI 161


>sp|PANB_PYRCJ|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GVKIFDIISK 10
GV+I D++ K
Sbjct: 118 GVEIVDVVEK 127


>sp|NTPTH_THEVO|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GVKIFDI 7
GV++FDI
Sbjct: 152 GVRVFDI 158


>sp|THI4_METTH|THIAMINE thiazole synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 GVKIFDIIS 9
G+KIF+++S
Sbjct: 118 GLKIFNLMS 126


>sp|THI4_PYRHO|THIAMINE thiazole synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GVKIFDII 8
GVKIF++I
Sbjct: 117 GVKIFNMI 124


>sp|PUS10_THEAC|TRNA pseudouridine synthase Pus10|Thermoplasma acidophilum (strain ATCC

Query: 1 GVKIFDI 7
GV+IFD+
Sbjct: 252 GVEIFDV 258


>sp|HPRT_METMA|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GVKIFDIIS 9
GV++ D+IS
Sbjct: 141 GVEVMDVIS 149


>sp|LYSZ_SACS2|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VKIFDII 8
VK+FDII
Sbjct: 145 VKLFDII 151


>sp|FEN_METTH|FLAP endonuclease 1|Methanothermobacter thermautotrophicus (strain

Query: 1 GVKIFDIIS 9
GVK+ D++S
Sbjct: 2 GVKLRDVVS 10




40|Sequence|196|205|DIISKQRITN

***** No hits found ******


41|Sequence|201|210|QRITNVPRDD

>sp|TF2B1_THEAC|TRANSCRIPTION initiation factor IIB 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RITNVPR 8
RITNVPR
Sbjct: 179 RITNVPR 185


>sp|TF2B1_THEVO|TRANSCRIPTION initiation factor IIB 1|Thermoplasma volcanium (strain ATCC 51530

Query: 2 RITNVPR 8
RITNVPR
Sbjct: 179 RITNVPR 185


>sp|MPGS_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 ITNVPRD 9
ITN+PR+
Sbjct: 38 ITNIPRE 44


>sp|QUED_PYRHO|PUTATIVE 6-carboxy-5,6,7,8-tetrahydropterin synthase|Pyrococcus horikoshii

Query: 1 QRITNVPRDD 10
++I VPRD+
Sbjct: 92 RKILKVPRDE 101


>sp|GLYA_METST|SERINE hydroxymethyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 2 RITNVPRDD 10
+I++VP DD
Sbjct: 136 KISSVPMDD 144


>sp|PYRI_CALMQ|ASPARTATE carbamoyltransferase regulatory chain|Caldivirga maquilingensis

Query: 3 ITNVPRDD 10
ITN PR+D
Sbjct: 119 ITNQPRED 126


>sp|SYFB_METBU|PHENYLALANINE--TRNA ligase beta subunit|Methanococcoides burtonii (strain DSM 6242

Query: 2 RITNVPRDD 10
R NVPR D
Sbjct: 273 RTLNVPRSD 281


>sp|CETZ1_HALVD|TUBULIN-LIKE protein CetZ1|Haloferax volcanii (strain ATCC 29605

Query: 3 ITNVPR 8
+TNVPR
Sbjct: 349 VTNVPR 354




42|Sequence|206|215|VPRDDISLRP

>sp|Y474_PYRAB|UPF0292 protein PYRAB04740|Pyrococcus abyssi (strain GE5 /

Query: 2 PRDDISLR 9
PRD+ISLR
Sbjct: 28 PRDEISLR 35


>sp|IF2P_PYRNV|PROBABLE translation initiation factor IF-2|Pyrobaculum neutrophilum (strain

Query: 1 VPRDDISLRP 10
+PRD +++RP
Sbjct: 222 IPRDKLTVRP 231


>sp|GCSPB_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 VPRDDISLRP 10
VP DD+ RP
Sbjct: 442 VPEDDLKSRP 451


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PRDDISLR 9
PRD ISLR
Sbjct: 164 PRDMISLR 171


>sp|EF1A_HALWD|ELONGATION factor 1-alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 2 PRDDISLRP 10
P DD+S +P
Sbjct: 252 PGDDVSFQP 260


>sp|SYH_THEKO|HISTIDINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 DISLRP 10
DISLRP
Sbjct: 73 DISLRP 78


>sp|HIS8_HALSA|HISTIDINOL-PHOSPHATE aminotransferase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PRDDISL 8
PRDDI++
Sbjct: 219 PRDDIAV 225


>sp|HIS8_HALS3|HISTIDINOL-PHOSPHATE aminotransferase|Halobacterium salinarum (strain ATCC 29341

Query: 2 PRDDISL 8
PRDDI++
Sbjct: 219 PRDDIAV 225




43|Sequence|211|220|ISLRPDMYPC

>sp|SYH_THEKO|HISTIDINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ISLRPDM 7
ISLRPDM
Sbjct: 74 ISLRPDM 80


Query: 1 ISLRPDMY 8
I LRPD+Y
Sbjct: 336 IKLRPDVY 343


>sp|SYH_PYRHO|HISTIDINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ISLRPDM 7
+SLRPDM
Sbjct: 72 VSLRPDM 78


>sp|SYH_PYRFU|HISTIDINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ISLRPDM 7
+SLRPDM
Sbjct: 72 VSLRPDM 78


>sp|PRIL_PYRAB|DNA primase large subunit PriL|Pyrococcus abyssi (strain GE5 /

Query: 2 SLRPDMYP 9
+LRPD++P
Sbjct: 221 TLRPDLFP 228


>sp|SYH_SACS2|HISTIDINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ISLRPDMYP 9
ISLRP++ P
Sbjct: 74 ISLRPEITP 82


>sp|HELS_PYRHO|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ISLRPDMYP 9
ISL PD+ P
Sbjct: 519 ISLTPDLIP 527


>sp|HELS_PYRAB|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus abyssi (strain GE5 /

Query: 1 ISLRPDMYP 9
ISL PD+ P
Sbjct: 519 ISLAPDLTP 527


>sp|Y1153_METTH|UNCHARACTERIZED protein MTH_1153|Methanothermobacter thermautotrophicus (strain

Query: 2 SLRPDMY 8
S+RPD+Y
Sbjct: 75 SMRPDVY 81


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 RPDMYP 9
RPD++P
Sbjct: 128 RPDLFP 133


>sp|HELS_PYRFU|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ISLRPDMYP 9
ISL PD+ P
Sbjct: 519 ISLTPDITP 527


>sp|ARFB_METTM|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanothermobacter marburgensis

Query: 4 RPDMYP 9
RP++YP
Sbjct: 167 RPELYP 172


>sp|KAE1_THEPD|TRNA N6-adenosine threonylcarbamoyltransferase|Thermofilum pendens

Query: 1 ISLRPDMYPC 10
++L P M PC
Sbjct: 82 VALGPGMGPC 91


>sp|G1PDH_METMA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SLRPDMY 8
S+RPD Y
Sbjct: 327 SIRPDRY 333


>sp|G1PDH_METAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosarcina acetivorans (strain ATCC

Query: 2 SLRPDMY 8
S+RPD Y
Sbjct: 327 SIRPDRY 333


>sp|NFI_THEVO|BIFUNCTIONAL methyltransferase/endonuclease|Thermoplasma volcanium (strain

Query: 1 ISLRPDMYPC 10
I+ PD PC
Sbjct: 52 INKEPDYIPC 61


>sp|MTAP_PYRAE|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 SLRPDMYP 9
SLRPD P
Sbjct: 107 SLRPDYAP 114




44|Sequence|216|225|DMYPCSLCWK

>sp|Y114_METTH|UNCHARACTERIZED protein MTH_114|Methanothermobacter thermautotrophicus (strain

Query: 5 CSLCW 9
CS CW
Sbjct: 17 CSYCW 21


>sp|RNZ_PYRIL|RIBONUCLEASE Z|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DMYPCSLCWK 10
D PC WK
Sbjct: 191 DTAPCPQMWK 200


>sp|LYEL_HALJT|LYCOPENE elongase/hydratase|Haloarcula japonica (strain ATCC 49778

Query: 3 YPCSLCW 9
Y C +CW
Sbjct: 224 YYCVMCW 230


>sp|ACDB_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit beta|Archaeoglobus fulgidus

Query: 1 DMYPCSLC 8
+ Y C+LC
Sbjct: 208 EFYSCTLC 215


>sp|Y426_ARCFU|UNCHARACTERIZED protein AF_0426|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DMYPCSL 7
+ YPCS+
Sbjct: 211 NFYPCSI 217


>sp|RNP3_THEKO|RIBONUCLEASE P protein component 3|Thermococcus kodakarensis (strain ATCC

Query: 1 DMYPCSLCWK 10
+ YP ++ WK
Sbjct: 210 NFYPRTIVWK 219


>sp|RNZ_PYRAE|RIBONUCLEASE Z|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DMYPCSLCWK 10
D PC WK
Sbjct: 191 DTAPCPEMWK 200


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 3 YPCSLC 8
Y CSLC
Sbjct: 158 YQCSLC 163


>sp|RPO12_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus shibatae (strain ATCC

Query: 2 MYPCSLCWK 10
+Y C CWK
Sbjct: 3 VYRCGKCWK 11


>sp|RPO12_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus solfataricus (strain

Query: 2 MYPCSLCWK 10
+Y C CWK
Sbjct: 3 VYRCGKCWK 11


>sp|RPO12_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 2 MYPCSLCWK 10
+Y C CWK
Sbjct: 3 VYRCGKCWK 11


>sp|RPO12_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 2 MYPCSLCWK 10
+Y C CWK
Sbjct: 3 VYRCGKCWK 11


>sp|RPO12_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 2 MYPCSLCWK 10
+Y C CWK
Sbjct: 3 VYRCGKCWK 11


>sp|RPO12_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 2 MYPCSLCWK 10
+Y C CWK
Sbjct: 3 VYRCGKCWK 11


>sp|RPO12_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 2 MYPCSLCWK 10
+Y C CWK
Sbjct: 3 VYRCGKCWK 11


>sp|RPO12_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 2 MYPCSLCWK 10
+Y C CWK
Sbjct: 3 VYRCGKCWK 11


>sp|RPO12_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo12|Sulfolobus acidocaldarius (strain

Query: 3 YPCSLCWK 10
Y C CWK
Sbjct: 4 YRCGKCWK 11




45|Sequence|221|230|SLCWKDNVTL

>sp|PYRG_THEVO|CTP synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SLCWKDNVT 9
+L WK+N+T
Sbjct: 81 NLSWKNNIT 89


>sp|BIOW_METRM|6-CARBOXYHEXANOATE--COA ligase|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 2 LCWKDN 7
LCW D+
Sbjct: 191 LCWSDD 196


>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 2 LCWKDNVTL 10
+C KDNV +
Sbjct: 93 ICIKDNVMI 101


>sp|Y706_METJA|UNCHARACTERIZED protein MJ0706|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 WKDNVTL 10
WK+N+T+
Sbjct: 92 WKNNLTV 98


>sp|GVPL2_HALSA|GAS vesicle protein L2|Halobacterium salinarum (strain ATCC 700922

Query: 3 CWKDNVTL 10
CW+ VTL
Sbjct: 128 CWEYRVTL 135




46|Sequence|226|235|DNVTLIIGWG

>sp|PIMT_METJA|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DNVTLIIGWG 10
DNV +I+G G
Sbjct: 128 DNVIVIVGDG 137


>sp|PIMT2_ARCFU|PROTEIN-L-ISOASPARTATE O-methyltransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DNVTLIIGWG 10
DNV +I+G G
Sbjct: 127 DNVEVIVGDG 136


>sp|PYRF_HALLT|OROTIDINE 5'-phosphate decarboxylase|Halorubrum lacusprofundi (strain ATCC

Query: 1 DNVTLIIG 8
DNV L++G
Sbjct: 176 DNVGLVVG 183


>sp|GLPK_THEKO|GLYCEROL kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DNVTLIIGWG 10
DN+ I WG
Sbjct: 277 DNLLTTIAWG 286


>sp|GLPK_THEGJ|GLYCEROL kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 DNVTLIIGWG 10
DN+ I WG
Sbjct: 277 DNLLTTIAWG 286


>sp|PIMT_IGNH4|PROTEIN-L-ISOASPARTATE O-methyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 DNVTLIIGWG 10
+NVT+++G G
Sbjct: 126 NNVTVLVGDG 135


>sp|ISCS1_ARCFU|CYSTEINE desulfurase IscS 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DNVTLIIGWG 10
+NV I+G+G
Sbjct: 235 ENVPAIVGFG 244




47|Sequence|231|240|IIGWGTSVKV

>sp|HMGCS_METS5|HYDROXYMETHYLGLUTARYL-COA synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 IIGWGTSV 8
IIGWG+ V
Sbjct: 5 IIGWGSYV 12


>sp|Y873_SACI7|UPF0145 protein YG5714_0873|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 IIGWGTSVKV 10
II +GT+VKV
Sbjct: 101 IIAYGTAVKV 110


>sp|PSLS_METJA|PHOSPHOSULFOLACTATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GWGTSVKV 10
GWGTS +
Sbjct: 45 GWGTSAVI 52


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 3 GWGTSVKV 10
GW SVK+
Sbjct: 789 GWSYSVKI 796


>sp|HMGCS_SULTO|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IIGWGTSV 8
I+GWG V
Sbjct: 5 IVGWGAYV 12


>sp|HMGCS_SACI6|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IIGWGTSV 8
I+GWG V
Sbjct: 5 ILGWGAYV 12


>sp|HMGCS_SACI4|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IIGWGTSV 8
I+GWG V
Sbjct: 5 ILGWGAYV 12


>sp|HMGCS_SACI3|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 IIGWGTSV 8
I+GWG V
Sbjct: 5 ILGWGAYV 12


>sp|HMGCS_SACI7|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 IIGWGTSV 8
I+GWG V
Sbjct: 5 ILGWGAYV 12


>sp|HMGCS_SACI2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 IIGWGTSV 8
I+GWG V
Sbjct: 5 ILGWGAYV 12


>sp|HMGCS_SACI1|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 IIGWGTSV 8
I+GWG V
Sbjct: 5 ILGWGAYV 12


>sp|NNR_METJA|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanocaldococcus jannaschii

Query: 1 IIGWG 5
I+GWG
Sbjct: 231 IVGWG 235


>sp|HMGCS_SULAC|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IIGWGTSV 8
I+GWG +
Sbjct: 5 IVGWGAYI 12


>sp|FTSZ1_HALVD|CELL division protein FtsZ 1|Haloferax volcanii (strain ATCC 29605

Query: 2 IGWGTSV 8
I WGTSV
Sbjct: 329 IIWGTSV 335


>sp|HMGCS_CALMQ|HYDROXYMETHYLGLUTARYL-COA synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 IIGWGTSV 8
I+GWG +
Sbjct: 5 IVGWGAYI 12


>sp|GUAAB_METMJ|GMP synthase [glutamine-hydrolyzing] subunit B|Methanoculleus

Query: 1 IIGWGTSVK 9
+IG GT VK
Sbjct: 232 LIGLGTGVK 240


>sp|Y3383_METAC|UPF0145 protein MA_3383|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IIGWGTSVKV 10
I+ +GT+VK+
Sbjct: 94 ILAYGTAVKI 103


>sp|FTSZ_HALMT|CELL division protein FtsZ|Haloferax mediterranei (strain ATCC 33500

Query: 2 IGWGTSV 8
I WGTSV
Sbjct: 327 IIWGTSV 333




48|Sequence|236|245|TSVKVCSVKE

>sp|Y3407_METJA|UNCHARACTERIZED protein MJECS07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KVCSVK 9
KVCS+K
Sbjct: 405 KVCSIK 410


>sp|TRPF_HALVD|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Haloferax volcanii (strain ATCC 29605

Query: 1 TSVKVCSVKE 10
T VKVC V +
Sbjct: 2 TRVKVCGVTD 11


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TSVKVCSVK 9
T VKV SVK
Sbjct: 747 TRVKVASVK 755




49|Sequence|241|250|CSVKERHASE

>sp|DADD_METB6|5'-DEOXYADENOSINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 1 CSVKERHASE 10
C +++RH E
Sbjct: 43 CEIRKRHRGE 52




50|Sequence|246|255|RHASEMRDLP

>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 ASEMRDL 9
ASEMRDL
Sbjct: 412 ASEMRDL 418


>sp|PYRB_SULAC|ASPARTATE carbamoyltransferase catalytic subunit|Sulfolobus acidocaldarius

Query: 1 RHASEMRDLP 10
R ASE+ D+P
Sbjct: 109 RFASEISDIP 118


>sp|RU1PA_HALXS|RIBULOSE-1-PHOSPHATE aldolase|Halopiger xanaduensis (strain DSM 18323

Query: 1 RHASEMRDL 9
HASE+ DL
Sbjct: 12 EHASELADL 20


>sp|GUAAA_NATPD|GMP synthase [glutamine-hydrolyzing] subunit A|Natronomonas pharaonis

Query: 2 HASEMRDLP 10
HA E+++LP
Sbjct: 123 HADEVKELP 131


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 1 RHASEMRDLP 10
+HA +M D P
Sbjct: 696 KHADDMSDTP 705


>sp|SFSA_SACI6|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 1 RHASEMRDL 9
RH E+R+L
Sbjct: 161 RHLKELREL 169


>sp|SFSA_SACI3|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 1 RHASEMRDL 9
RH E+R+L
Sbjct: 161 RHLKELREL 169


>sp|CBIA_METBF|COBYRINATE a,c-diamide synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 HASEMRDLP 10
H SE+R++P
Sbjct: 426 HHSEIREIP 434


>sp|CBIA_METAC|COBYRINATE a,c-diamide synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 HASEMRDLP 10
H SE+R++P
Sbjct: 429 HHSEIREIP 437


>sp|SFSA_SACI2|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 1 RHASEMRDL 9
RH E+R+L
Sbjct: 161 RHLKELREL 169




51|Sequence|251|260|MRDLPSRYVE

>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 RDLPSRYVE 10
R LP RYVE
Sbjct: 132 RSLPDRYVE 140


>sp|SYM_METAR|METHIONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 RDLPSRYVE 10
R LP RYVE
Sbjct: 143 RGLPDRYVE 151


>sp|SYT_NATPD|THREONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 RDLPSRYVE 10
RDLP RY E
Sbjct: 349 RDLPVRYAE 357


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 3 DLPSRYVE 10
D PSRY+E
Sbjct: 642 DYPSRYIE 649


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 RDLPSRYVE 10
R LP RYVE
Sbjct: 133 RFLPDRYVE 141


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RDLPSRYVE 10
R LP RYVE
Sbjct: 140 RFLPDRYVE 148


>sp|SYT_HALWD|THREONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 RDLPSRYVE 10
RDLP RY E
Sbjct: 349 RDLPVRYFE 357


>sp|SYT_HALMA|THREONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 RDLPSRYVE 10
RDLP RY E
Sbjct: 349 RDLPVRYFE 357


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 RDLPSRYVE 10
R LP RYVE
Sbjct: 136 RFLPDRYVE 144


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 RDLPSRYVE 10
R LP RYVE
Sbjct: 133 RFLPDRYVE 141


>sp|SYM_METBU|METHIONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 RDLPSRYVE 10
R LP RYV+
Sbjct: 137 RSLPDRYVK 145


>sp|TYW1_PYRHO|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus horikoshii (strain ATCC

Query: 1 MRDLPSRYV 9
MRDLP+R V
Sbjct: 232 MRDLPTRTV 240


>sp|SYT_HALSA|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 RDLPSRYVE 10
RDLP RY E
Sbjct: 349 RDLPVRYFE 357


>sp|SYT_HALS3|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 RDLPSRYVE 10
RDLP RY E
Sbjct: 349 RDLPVRYFE 357


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RDLPSRYVE 10
R LP RYVE
Sbjct: 140 RFLPDRYVE 148


>sp|TYW1_PYRAB|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 MRDLPSRYV 9
MRDLP+R V
Sbjct: 232 MRDLPTRTV 240


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 RDLPSRYVE 10
R LP RYVE
Sbjct: 133 RFLPDRYVE 141


>sp|SYM_ARCFU|METHIONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RDLPSRYVE 10
R LP RYVE
Sbjct: 129 RFLPDRYVE 137


>sp|SYM_METTH|METHIONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 RDLPSRYVE 10
R LP RYVE
Sbjct: 132 RFLPDRYVE 140


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 RDLPSRYVE 10
R LP RYVE
Sbjct: 135 RPLPDRYVE 143


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 LPSRYVE 10
LPS+YVE
Sbjct: 295 LPSKYVE 301


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 RDLPSRYVE 10
R LP RYVE
Sbjct: 133 RFLPDRYVE 141


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 LPSRYVE 10
LP RYVE
Sbjct: 134 LPDRYVE 140


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LPSRYVE 10
LP RYVE
Sbjct: 133 LPDRYVE 139


>sp|SYM_HALSA|METHIONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 LPSRYVE 10
LP RYVE
Sbjct: 141 LPDRYVE 147


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 RDLPSRYVE 10
R LP RYVE
Sbjct: 135 RFLPDRYVE 143


>sp|K6PF_METJA|BIFUNCTIONAL ADP-specific glucokinase/phosphofructokinase|Methanocaldococcus

Query: 5 PSRYVE 10
PSRYVE
Sbjct: 427 PSRYVE 432


>sp|DTDA_THEVO|D-AMINOACYL-TRNA deacylase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 DLPSRYVE 10
DLP+ YVE
Sbjct: 135 DLPNYYVE 142


>sp|SYM_HALMA|METHIONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 LPSRYVE 10
LP RYVE
Sbjct: 141 LPDRYVE 147


>sp|SYM_THEVO|METHIONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 RDLPSRYVE 10
R +P RY+E
Sbjct: 134 RFMPDRYIE 142


>sp|IF2P_HYPBU|PROBABLE translation initiation factor IF-2|Hyperthermus butylicus (strain

Query: 2 RDLPSRYVE 10
RD+P RY +
Sbjct: 384 RDIPIRYAD 392


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MRDLPSRYVE 10
M D SRY+E
Sbjct: 294 MEDAYSRYIE 303


>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RDLPSRYVE 10
R +P RY+E
Sbjct: 134 RFMPDRYIE 142


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 3 DLPSRY 8
DLP+RY
Sbjct: 945 DLPARY 950


>sp|SYC_PYRIL|CYSTEINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 RDLPSRYV 9
R++P RY+
Sbjct: 90 REIPERYI 97


>sp|PELO_METS5|PROTEIN pelota homolog|Metallosphaera sedula (strain ATCC 51363

Query: 1 MRDLPSRY 8
+RD P RY
Sbjct: 79 VRDAPERY 86


>sp|DTDA_THEAC|D-AMINOACYL-TRNA deacylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 DLPSRYVE 10
D+P+ YVE
Sbjct: 135 DIPNYYVE 142




52|Sequence|256|265|SRYVEIVSQF

>sp|MOAA_HALWD|PROBABLE GTP 3',8-cyclase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 RYVEIVSQF 10
R++E+VSQF
Sbjct: 54 RFLEVVSQF 62


>sp|ECFA_METTH|ENERGY-COUPLING factor transporter ATP-binding protein|Methanothermobacter

Query: 1 SRYVEIVSQF 10
S VEI+SQF
Sbjct: 194 SHDVEIISQF 203


>sp|RLME_METVS|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus vannielii (strain

Query: 2 RYVEIVSQF 10
+YVE+VS++
Sbjct: 169 KYVELVSEY 177


>sp|METK_PYRAE|S-ADENOSYLMETHIONINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 YVEIVSQ 9
YVEIVSQ
Sbjct: 341 YVEIVSQ 347


>sp|METK_PYRNV|S-ADENOSYLMETHIONINE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 YVEIVSQ 9
YVEIVSQ
Sbjct: 341 YVEIVSQ 347


>sp|METK_PYRIL|S-ADENOSYLMETHIONINE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 YVEIVSQ 9
YVEIVSQ
Sbjct: 341 YVEIVSQ 347


>sp|METXA_METLZ|HOMOSERINE O-acetyltransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 SRYVEIVS 8
+RY EIVS
Sbjct: 335 ARYAEIVS 342


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 1 SRYVEIVS 8
SRY+EI++
Sbjct: 645 SRYIEIIN 652


>sp|AATI_METJA|A-TYPE ATP synthase subunit I|Methanocaldococcus jannaschii (strain ATCC

Query: 3 YVEIVSQF 10
YVE SQF
Sbjct: 665 YVEFFSQF 672


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 RYVEIVSQF 10
R+ E+VS+F
Sbjct: 703 RFYELVSEF 711


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RYVEIVSQF 10
R+ E+VS+F
Sbjct: 703 RFYELVSEF 711


>sp|NIKR_METTP|PUTATIVE nickel-responsive regulator|Methanothrix thermoacetophila (strain

Query: 1 SRYVEIVSQ 9
SR+ EI+SQ
Sbjct: 18 SRFDEIISQ 26




53|Sequence|261|270|IVSQFETEFY

>sp|AATC_THEGJ|A-TYPE ATP synthase subunit C|Thermococcus gammatolerans (strain DSM 15229

Query: 2 VSQFETEFY 10
V QFETE Y
Sbjct: 191 VDQFETELY 199


>sp|GSA_METPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 SQFETEF 9
SQFET F
Sbjct: 391 SQFETNF 397


>sp|GSA_METMJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 SQFETEF 9
SQFET F
Sbjct: 386 SQFETNF 392


>sp|GSA_METLZ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 SQFETEF 9
SQFET F
Sbjct: 386 SQFETNF 392


>sp|GSA_METHJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 SQFETEF 9
SQFET F
Sbjct: 388 SQFETNF 394


>sp|GSA_METB6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanoregula boonei (strain DSM 21154

Query: 3 SQFETEF 9
SQFET F
Sbjct: 386 SQFETNF 392


>sp|GSA_METAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocella arvoryzae (strain DSM 22066

Query: 3 SQFETEF 9
SQFET F
Sbjct: 395 SQFETNF 401


>sp|GSA_METBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcoides burtonii (strain DSM 6242

Query: 3 SQFETEF 9
SQFET F
Sbjct: 394 SQFETNF 400


>sp|AATC_THEKO|A-TYPE ATP synthase subunit C|Thermococcus kodakarensis (strain ATCC

Query: 2 VSQFETEFY 10
VS FETE Y
Sbjct: 191 VSTFETELY 199


>sp|AATC_DESSY|A-TYPE ATP synthase subunit C|Desulfurococcus sp. (strain SY)

Query: 2 VSQFETEFY 10
V++FETE Y
Sbjct: 190 VTRFETELY 198


>sp|GSA_METAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 SQFETEF 9
SQFET F
Sbjct: 397 SQFETNF 403


>sp|GSA_METTP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 SQFETEF 9
SQ+ET+F
Sbjct: 400 SQYETDF 406


>sp|GSA_METMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 SQFETEF 9
SQFET F
Sbjct: 397 SQFETNF 403


>sp|PUS10_THEPD|TRNA pseudouridine synthase Pus10|Thermofilum pendens (strain DSM 2475

Query: 2 VSQFETEFY 10
+SQ E EFY
Sbjct: 389 ISQDEVEFY 397


>sp|GSA_THEAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 SQFETEF 9
SQFET F
Sbjct: 389 SQFETNF 395


>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 IVSQFETEFY 10
+ +QFE E+Y
Sbjct: 149 VANQFEVEYY 158


>sp|GSA_METBF|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina barkeri (strain Fusaro /

Query: 3 SQFETEF 9
SQFET F
Sbjct: 397 SQFETNF 403


>sp|GSA_PICTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Picrophilus torridus (strain ATCC 700027

Query: 3 SQFETEF 9
SQFET F
Sbjct: 390 SQFETNF 396


>sp|SALAC_HALSA|SALACTIN salinarum (strain ATCC 700922

Query: 1 IVSQFETEF 9
IVS+FET
Sbjct: 317 IVSEFETRL 325


>sp|AATC_THEON|A-TYPE ATP synthase subunit C|Thermococcus onnurineus (strain NA1)

Query: 2 VSQFETEFY 10
+ +FETE Y
Sbjct: 192 LKEFETELY 200


>sp|Y2678_METMA|UNCHARACTERIZED serpin-like protein MM_2675|Methanosarcina mazei (strain ATCC

Query: 2 VSQFETEF 9
+ +FETEF
Sbjct: 284 IKEFETEF 291




54|Sequence|266|275|ETEFYISGLA

>sp|HPRT_METPW|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanobacterium paludis (strain DSM

Query: 1 ETEFYISGL 9
E E YI+GL
Sbjct: 103 EGELYINGL 111


>sp|ENDA_PYRHO|TRNA-SPLICING endonuclease|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 EFYISG 8
EFY+SG
Sbjct: 6 EFYLSG 11


>sp|FLUC_THEKO|FLUORIDE-SPECIFIC ion channel FluC|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 EFYISGL 9
FYISGL
Sbjct: 20 RFYISGL 26


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EFYISGLA 10
E+YI GL+
Sbjct: 543 EYYIEGLS 550


>sp|DTDA_SACS2|D-AMINOACYL-TRNA deacylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ETEFYISGLA 10
+ E+YISG
Sbjct: 153 DCEYYISGFG 162


>sp|PSTB_METJA|PHOSPHATE import ATP-binding protein PstB|Methanocaldococcus jannaschii

Query: 1 ETEFYISG 8
ET+ YISG
Sbjct: 242 ETDDYISG 249


>sp|ENDA_PYRAB|TRNA-SPLICING endonuclease|Pyrococcus abyssi (strain GE5 /

Query: 3 EFYISG 8
EFY+SG
Sbjct: 6 EFYLSG 11


>sp|Y1561_METJA|UNCHARACTERIZED protein MJ1561|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ETEFYISGL 9
ET+FY+ L
Sbjct: 229 ETKFYLGAL 237


>sp|ENDA_PYRFU|TRNA-SPLICING endonuclease|Pyrococcus furiosus (strain ATCC 43587

Query: 3 EFYISG 8
EFY+SG
Sbjct: 6 EFYLSG 11




55|Sequence|271|280|ISGLAPLCDQ

>sp|PDXT_METAR|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanocella arvoryzae (strain

Query: 2 SGLAPLCD 9
SG+ P CD
Sbjct: 35 SGIVPTCD 42


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 4 LAPLCDQ 10
L P+CDQ
Sbjct: 68 LTPMCDQ 74


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 4 LAPLCDQ 10
L P+CDQ
Sbjct: 68 LTPMCDQ 74


>sp|FAEHP_METMJ|BIFUNCTIONAL enzyme Fae/Hps|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 ISGLAPL 7
ISGLAP+
Sbjct: 256 ISGLAPI 262


>sp|DPCKG_METKA|GTP-DEPENDENT dephospho-CoA kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 ISGLAPLC 8
ISG+ P C
Sbjct: 180 ISGITPCC 187




56|Sequence|276|285|PLCDQLVVLS

>sp|PSB_METAR|PROTEASOME subunit beta|Methanocella arvoryzae (strain DSM 22066

Query: 2 LCDQLVVLS 10
+CDQ VVL+
Sbjct: 16 ICDQGVVLA 24


>sp|ARLY_METMP|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LCDQLVVLS 10
+C++LVV S
Sbjct: 252 ICEELVVFS 260


>sp|ARLY_METM7|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C7 /

Query: 2 LCDQLVVLS 10
+C++LVV S
Sbjct: 252 ICEELVVFS 260


>sp|ARLY_METM6|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C6 /

Query: 2 LCDQLVVLS 10
+C++LVV S
Sbjct: 252 ICEELVVFS 260


>sp|ARLY_METM5|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C5 /

Query: 2 LCDQLVVLS 10
+C++LVV S
Sbjct: 252 ICEELVVFS 260


>sp|BTUDA_HALSA|COBALAMIN import ATP-binding protein BtuD|Halobacterium salinarum (strain

Query: 3 CDQLVVLS 10
CD+LVV++
Sbjct: 204 CDELVVVA 211


>sp|BTUDA_HALS3|COBALAMIN import ATP-binding protein BtuD|Halobacterium salinarum (strain

Query: 3 CDQLVVLS 10
CD+LVV++
Sbjct: 204 CDELVVVA 211


>sp|KAE1_PYRNV|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum neutrophilum

Query: 3 CDQLVVL 9
CD LVVL
Sbjct: 123 CDPLVVL 129


>sp|KAE1_PYRAR|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum arsenaticum

Query: 3 CDQLVVL 9
CD LVVL
Sbjct: 123 CDPLVVL 129


>sp|KAE1_PYRIL|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum islandicum

Query: 3 CDQLVVL 9
CD LVVL
Sbjct: 123 CDPLVVL 129




57|Sequence|281|290|LVVLSYVKEI

>sp|MVK_THESM|MEVALONATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 3 VLSYVKE 9
VLSYV+E
Sbjct: 79 VLSYVRE 85


>sp|MVK_PYRFU|MEVALONATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VLSYVKE 9
VLSYV+E
Sbjct: 79 VLSYVRE 85


>sp|PELO_PYRAE|PROTEIN pelota homolog|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LVVLSYVKE 9
L+V SY+KE
Sbjct: 280 LIVDSYIKE 288


>sp|AMZA_PYRHO|ARCHAEMETZINCIN horikoshii (strain ATCC 700860

Query: 1 LVVLSYVKE 9
L VLSY+K+
Sbjct: 64 LPVLSYIKK 72




58|Sequence|286|295|YVKEISEKTE

>sp|SYT_PYRAB|THREONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 VKEISEKTE 10
+KEI EKTE
Sbjct: 596 IKEIKEKTE 604


>sp|CSL4_ARCFU|EXOSOME complex component Csl4|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YVKEISE 7
YVKEISE
Sbjct: 104 YVKEISE 110


>sp|RL11_THEAC|LARGE ribosomal subunit protein uL11|Thermoplasma acidophilum (strain

Query: 1 YVKEISEKTE 10
VKEI+EKT+
Sbjct: 34 VVKEINEKTK 43


>sp|CSX1_METJA|CRISPR system endoribonuclease Csx1|Methanocaldococcus jannaschii

Query: 2 VKEISEKTE 10
VKE+ EKTE
Sbjct: 65 VKEVKEKTE 73


>sp|RL11_META3|LARGE ribosomal subunit protein uL11|Methanococcus aeolicus (strain

Query: 2 VKEISEKTE 10
VKEI+EKT+
Sbjct: 36 VKEINEKTK 44


>sp|RL11_THEVO|LARGE ribosomal subunit protein uL11|Thermoplasma volcanium (strain

Query: 1 YVKEISEKTE 10
VKEI+EKT+
Sbjct: 34 VVKEINEKTK 43


>sp|Y1489_METJA|MCM-LIKE protein MJ1489|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VKEISEKTE 10
+KE+SEK+E
Sbjct: 629 IKELSEKSE 637


>sp|RL11_KORCO|LARGE ribosomal subunit protein uL11|Korarchaeum cryptofilum (strain

Query: 2 VKEISEKT 9
VKEI+EKT
Sbjct: 36 VKEINEKT 43


>sp|RL11_METJA|LARGE ribosomal subunit protein uL11|Methanocaldococcus jannaschii

Query: 2 VKEISEKT 9
VKEI+EKT
Sbjct: 36 VKEINEKT 43


>sp|SYT_THESM|THREONINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 VKEISEKTE 10
+KEI +KTE
Sbjct: 596 IKEIRQKTE 604


>sp|SYT_PYRFU|THREONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VKEISEKTE 10
+KEI +KTE
Sbjct: 596 IKEIKQKTE 604


>sp|CH60_METB6|CHAPERONIN GroEL|Methanoregula boonei (strain DSM 21154

Query: 1 YVKEISEKTE 10
VKE+++KT+
Sbjct: 73 LVKEVAQKTQ 82


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 YVKEISE 7
YV+EISE
Sbjct: 809 YVREISE 815




59|Sequence|291|300|SEKTEREYCA

>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 SEKTEREYCA 10
+EK RE+CA
Sbjct: 40 TEKEMREWCA 49


>sp|KAE1B_THEAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 4 TEREYC 9
T+REYC
Sbjct: 278 TDREYC 283


>sp|RF1_HALWD|PEPTIDE chain release factor subunit|Haloquadratum walsbyi (strain DSM

Query: 1 SEKTERE 7
SEKTERE
Sbjct: 363 SEKTERE 369


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 5 EREYCA 10
E+EYCA
Sbjct: 1109 EKEYCA 1114




60|Sequence|296|305|REYCARPRLD

>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 REYCARPRLD 10
RE+CA+ LD
Sbjct: 45 REWCAQNYLD 54


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EYCARPRLD 10
EY +P+LD
Sbjct: 196 EYTKKPKLD 204


>sp|GFCR_METPE|TRANSCRIPTIONAL regulator GfcR|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 REYCARP 7
R YCA P
Sbjct: 75 RYYCAHP 81


>sp|FTTA_METJA|TRANSCRIPTION termination factor FttA|Methanocaldococcus jannaschii (strain ATCC

Query: 3 YCARPRLD 10
YC RP D
Sbjct: 262 YCTRPTRD 269




61|Sequence|301|310|RPRLDIIQPL

>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 PRLDIIQP 9
PR+D+I P
Sbjct: 830 PRMDVIGP 837


>sp|AATA3_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 RPRLDIIQPL 10
R RLD ++PL
Sbjct: 202 RERLDPVEPL 211


>sp|SYFB_HALMA|PHENYLALANINE--TRNA ligase beta subunit|Haloarcula marismortui (strain ATCC 43049

Query: 3 RLDIIQPL 10
R+D+I PL
Sbjct: 345 RVDVIHPL 352


>sp|NUCS_SULAC|ENDONUCLEASE NucS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PRLDIIQP 9
PRL II+P
Sbjct: 47 PRLTIIKP 54


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 2 PRLDIIQP 9
PRL +I+P
Sbjct: 47 PRLGVIEP 54


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 2 PRLDIIQP 9
PRL +I+P
Sbjct: 47 PRLGVIEP 54




62|Sequence|306|315|IIQPLSETCE

>sp|SYT_HALSA|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 QPLSETCE 10
+P+SE CE
Sbjct: 51 EPISEDCE 58


>sp|SYT_HALS3|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 QPLSETCE 10
+P+SE CE
Sbjct: 51 EPISEDCE 58


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain DSM

Query: 4 PLSETC 9
PLSE+C
Sbjct: 1039 PLSESC 1044


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 1 IIQPLSETCE 10
+I+P+SE E
Sbjct: 660 VIRPISEEAE 669


>sp|ADHS_METVS|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 5 LSETCE 10
+SETCE
Sbjct: 137 ISETCE 142


>sp|ADHS_METMP|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 5 LSETCE 10
+SETCE
Sbjct: 137 ISETCE 142


>sp|ADHS_METM7|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus maripaludis (strain C7 /

Query: 5 LSETCE 10
+SETCE
Sbjct: 137 ISETCE 142


>sp|ADHS_METM6|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus maripaludis (strain C6 /

Query: 5 LSETCE 10
+SETCE
Sbjct: 137 ISETCE 142


>sp|ADHS_METM5|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus maripaludis (strain C5 /

Query: 5 LSETCE 10
+SETCE
Sbjct: 137 ISETCE 142




63|Sequence|311|320|SETCEEISSD

>sp|ADHS_METM6|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 SETCEE 6
SETCE+
Sbjct: 138 SETCEQ 143


>sp|TRPF_METKA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanopyrus kandleri (strain AV19 /

Query: 2 ETCEEIS 8
ETCEE+S
Sbjct: 87 ETCEELS 93


>sp|ADHS_METM7|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 SETCEE 6
SETCE+
Sbjct: 138 SETCEQ 143


>sp|ADHS_METM5|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 SETCEE 6
SETCE+
Sbjct: 138 SETCEQ 143


>sp|AROC_THEVO|CHORISMATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 TCEEISSD 10
TC+EI D
Sbjct: 164 TCDEIRGD 171




64|Sequence|316|325|EISSDALTVR

>sp|AROA_METPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 EISSDALTVR 10
+IS+DA+T+
Sbjct: 358 DISADAITIH 367




65|Sequence|321|330|ALTVRGFQEN

>sp|GLYA_HALMA|SERINE hydroxymethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 ALTVRGFQEN 10
ALT RGF E+
Sbjct: 366 ALTTRGFDED 375


>sp|GLYA_HALWD|SERINE hydroxymethyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ALTVRGFQEN 10
ALT RGF E+
Sbjct: 366 ALTTRGFTES 375


>sp|GLYA_NATPD|SERINE hydroxymethyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ALTVRGFQE 9
ALT RGF E
Sbjct: 366 ALTTRGFDE 374


>sp|Y130_ARCFU|PROBABLE deacetylase AF_0130|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ALTVRGFQE 9
ALT RG+ E
Sbjct: 260 ALTARGYAE 268


>sp|GLYA_METTP|SERINE hydroxymethyltransferase|Methanothrix thermoacetophila (strain DSM

Query: 1 ALTVRGFQEN 10
A+T RG +EN
Sbjct: 362 AVTSRGMKEN 371


>sp|GLYA_HALSA|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 ALTVRGFQEN 10
ALT RGF +
Sbjct: 366 ALTTRGFDAD 375


>sp|GLYA_HALS3|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 ALTVRGFQEN 10
ALT RGF +
Sbjct: 366 ALTTRGFDAD 375


>sp|HTPX_SACI1|PROTEASE HtpX homolog|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 ALTVRGFQEN 10
ALTV G +EN
Sbjct: 232 ALTVPGGKEN 241


>sp|HTPX2_SACS2|PROTEASE HtpX homolog 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ALTVRGFQEN 10
ALTV G +EN
Sbjct: 231 ALTVPGGKEN 240


>sp|AATD_THEAC|A-TYPE ATP synthase subunit D|Thermoplasma acidophilum (strain ATCC

Query: 3 TVRGFQEN 10
T+RG +EN
Sbjct: 50 TIRGMKEN 57


>sp|AATD_THEVO|A-TYPE ATP synthase subunit D|Thermoplasma volcanium (strain ATCC 51530

Query: 3 TVRGFQEN 10
T+RG +EN
Sbjct: 44 TIRGMREN 51




66|Sequence|326|335|GFQENECRDY

>sp|SYFB_THEKO|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GFQENECRDY 10
G + ECRDY
Sbjct: 406 GEHQEECRDY 415


>sp|DTDA_SACI7|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 ENECRDY 10
E +CRDY
Sbjct: 151 ETDCRDY 157


>sp|DTDA_SACI6|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 ENECRDY 10
E +CRDY
Sbjct: 151 ETDCRDY 157


>sp|DTDA_SACI4|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 ENECRDY 10
E +CRDY
Sbjct: 151 ETDCRDY 157


>sp|DTDA_SACI3|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 ENECRDY 10
E +CRDY
Sbjct: 151 ETDCRDY 157


>sp|DTDA_SACI2|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 ENECRDY 10
E +CRDY
Sbjct: 151 ETDCRDY 157


>sp|DTDA_SACI1|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 ENECRDY 10
E +CRDY
Sbjct: 151 ETDCRDY 157


>sp|GLYA_HALMA|SERINE hydroxymethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GFQENECRD 9
GF E+ CR+
Sbjct: 371 GFDEDACRE 379


>sp|GSA_METST|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 FQENECRDY 10
F ENE DY
Sbjct: 355 FTENEVYDY 363


>sp|RL24E_METS5|LARGE ribosomal subunit protein eL24|Metallosphaera sedula (strain ATCC

Query: 2 FQENECRDY 10
F N+CR Y
Sbjct: 32 FCSNKCRKY 40


>sp|Y233_ARCFU|UNCHARACTERIZED protein AF_0233|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GFQENECR 8
GF ECR
Sbjct: 75 GFSHEECR 82




67|Sequence|331|340|ECRDYHLEYS

>sp|TRUD_METKA|PROBABLE tRNA pseudouridine synthase D|Methanopyrus kandleri (strain AV19

Query: 1 ECRDYH 6
ECR+YH
Sbjct: 20 ECREYH 25


>sp|CDC6_METST|ORC1-TYPE DNA replication protein|Methanosphaera stadtmanae (strain ATCC

Query: 2 CRDYHLEY 9
C DY+ EY
Sbjct: 95 CTDYNTEY 102


>sp|PYRC_METKA|DIHYDROOROTASE kandleri (strain AV19 /

Query: 2 CRDYHLEY 9
CRD H +Y
Sbjct: 64 CRDPHPDY 71


>sp|KAE1B_METTH|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 CRDYHLEY 9
C+++H+E+
Sbjct: 269 CQEHHVEF 276


>sp|HPRT_METMS|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanohalophilus mahii (strain ATCC

Query: 1 ECRDYHLEYS 10
E DY +EYS
Sbjct: 41 EISDYIIEYS 50


>sp|ACD_METJA|ACETATE--COA ligase [ADP-forming]|Methanocaldococcus jannaschii (strain ATCC

Query: 3 RDYHLEY 9
RDY L+Y
Sbjct: 4 RDYELKY 10


>sp|SYFB_THEKO|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ECRDY 5
ECRDY
Sbjct: 411 ECRDY 415


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 RDYHLEY 9
RDY LEY
Sbjct: 197 RDYLLEY 203


>sp|KITH_THEKO|THYMIDINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 CRDYHL 7
CR++HL
Sbjct: 188 CREHHL 193


>sp|Y1986_ARCFU|UNCHARACTERIZED protein AF_1986|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CRDYHLEYS 10
DYH++YS
Sbjct: 24 INDYHVDYS 32


>sp|SYD_PYRHO|ASPARTATE--TRNA(ASP) ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 CRDYHLEY 9
CR + LEY
Sbjct: 350 CRAFDLEY 357


>sp|SYD_PYRFU|ASPARTATE--TRNA(ASP) ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CRDYHLEY 9
CR + LEY
Sbjct: 350 CRAFDLEY 357


>sp|G1PDH_METS3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanobrevibacter smithii (strain ATCC

Query: 2 CRDYHLE 8
C+D HL+
Sbjct: 26 CKDLHLD 32


>sp|SYD_THEKO|ASPARTATE--TRNA(ASP) ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 CRDYHLEY 9
CR + LEY
Sbjct: 350 CRAFDLEY 357


>sp|PGMI_THEAC|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Thermoplasma acidophilum

Query: 2 CRDYHL 7
C DYH+
Sbjct: 61 CDDYHI 66


>sp|RF1_HALWD|PEPTIDE chain release factor subunit|Haloquadratum walsbyi (strain DSM

Query: 1 ECRDYHLEY 9
EC D H EY
Sbjct: 334 ECPDGHEEY 342


>sp|CDC61_METTH|ORC1-TYPE DNA replication protein 1|Methanothermobacter thermautotrophicus

Query: 2 CRDYHLEY 9
C DY EY
Sbjct: 94 CTDYTTEY 101




68|Sequence|336|345|HLEYSEGESL

>sp|SURE_METM5|5'-NUCLEOTIDASE SurE|Methanococcus maripaludis (strain C5 /

Query: 1 HLEYSEGES 9
HL++ EGES
Sbjct: 138 HLKFKEGES 146


>sp|SURE_METM6|5'-NUCLEOTIDASE SurE|Methanococcus maripaludis (strain C6 /

Query: 1 HLEYSEGES 9
HL++ EGES
Sbjct: 138 HLKFKEGES 146


>sp|SURE_METMP|5'-NUCLEOTIDASE SurE|Methanococcus maripaludis (strain DSM 14266

Query: 1 HLEYSEGES 9
HL++ EGES
Sbjct: 136 HLKFKEGES 144


>sp|SURE_METM7|5'-NUCLEOTIDASE SurE|Methanococcus maripaludis (strain C7 /

Query: 1 HLEYSEGES 9
HL++ EGES
Sbjct: 138 HLKFKEGES 146


>sp|SURE_METVS|5'-NUCLEOTIDASE SurE|Methanococcus vannielii (strain ATCC 35089

Query: 1 HLEYSEGES 9
HL++ EGES
Sbjct: 138 HLKFKEGES 146


>sp|ISCS_METTE|CYSTEINE desulfurase IscS|Methanosarcina thermophila

Query: 2 LEYSEGESL 10
EY EGESL
Sbjct: 313 FEYIEGESL 321


>sp|HIS8_METM5|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C5 /

Query: 1 HLEYSEGE 8
++EYS+GE
Sbjct: 200 YIEYSKGE 207


>sp|RS4E_METVS|SMALL ribosomal subunit protein eS4|Methanococcus vannielii (strain ATCC

Query: 1 HLEYSEGE 8
H+E++EG+
Sbjct: 179 HVEFNEGK 186


>sp|RS4E_METVA|SMALL ribosomal subunit protein eS4|Methanococcus vannielii

Query: 1 HLEYSEGE 8
H+E++EG+
Sbjct: 179 HVEFNEGK 186


>sp|RS4E_HALLT|SMALL ribosomal subunit protein eS4|Halorubrum lacusprofundi (strain ATCC

Query: 1 HLEYSEG 7
H EY EG
Sbjct: 168 HFEYEEG 174


>sp|SYE_PYRHO|GLUTAMATE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 EYSEGESL 10
EY EGE++
Sbjct: 233 EYKEGEAV 240


>sp|SYE_THEON|GLUTAMATE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 EYSEGESL 10
EY EGE++
Sbjct: 234 EYKEGEAV 241




69|Sequence|341|350|EGESLFYIVS

>sp|TRMY_METAC|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanosarcina

Query: 1 EGESLFYI 8
EG +LFY+
Sbjct: 121 EGRTLFYL 128


>sp|CAS5_ARCFU|CRISPR-ASSOCIATED protein Cas5|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EGESLFYIV 9
EGE +FY V
Sbjct: 54 EGERVFYAV 62


>sp|CAS2_THEPD|CRISPR-ASSOCIATED endoribonuclease Cas2|Thermofilum pendens (strain DSM 2475

Query: 1 EGESLFYIV 9
EG+S+F IV
Sbjct: 57 EGDSVFVIV 65


>sp|TRM1_AERPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Aeropyrum pernix (strain

Query: 1 EGESLFYIVS 10
EG S+ YI S
Sbjct: 14 EGRSIIYIPS 23




70|Sequence|346|355|FYIVSPRDVV

>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 1 FYIVSPRDVV 10
FY V P+DVV
Sbjct: 140 FYEVDPKDVV 149


>sp|FDHB2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 1 FYIVSPRDVV 10
FY V P DV+
Sbjct: 138 FYDVDPEDVI 147


>sp|FDHB_METJA|F420-DEPENDENT formate dehydrogenase subunit beta|Methanocaldococcus jannaschii

Query: 1 FYIVSPRDVV 10
FY V+P DVV
Sbjct: 138 FYEVNPLDVV 147


>sp|QUEE_HYPBU|7-CARBOXY-7-DEAZAGUANINE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 FYIVSPRDV 9
+++VSP+DV
Sbjct: 131 YHVVSPKDV 139


>sp|LEUC_METS5|3-ISOPROPYLMALATE dehydratase large subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 YIVSPRDV 9
YI PRDV
Sbjct: 407 YITDPRDV 414


>sp|RL15_NATPD|LARGE ribosomal subunit protein uL15|Natronomonas pharaonis (strain

Query: 2 YIVSPRDVV 10
Y+V RDVV
Sbjct: 89 YVVDARDVV 97


>sp|Y485_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 IVSPRDVV 10
I++PRD+V
Sbjct: 73 IIAPRDIV 80


>sp|TRPD_PYRFU|ANTHRANILATE phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FYIVSPRD 8
FY V+P D
Sbjct: 235 FYTVTPED 242


>sp|RNZ_SACI6|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.16.4 /

Query: 1 FYIVSPRDV 9
YI+ PRD+
Sbjct: 86 LYILGPRDL 94


>sp|RNZ_SACI4|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.14.25 /

Query: 1 FYIVSPRDV 9
YI+ PRD+
Sbjct: 86 LYILGPRDL 94


>sp|RNZ_SACI3|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 FYIVSPRDV 9
YI+ PRD+
Sbjct: 86 LYILGPRDL 94


>sp|RNZ_SACI2|RIBONUCLEASE Z|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 FYIVSPRDV 9
YI+ PRD+
Sbjct: 86 LYILGPRDL 94


>sp|RNZ_SACI7|RIBONUCLEASE Z|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 FYIVSPRDV 9
YI+ PRD+
Sbjct: 86 LYILGPRDL 94


>sp|RNZ_SACI1|RIBONUCLEASE Z|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 FYIVSPRDV 9
YI+ PRD+
Sbjct: 86 LYILGPRDL 94


>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 2 YIVSPRDV 9
+++SPRD+
Sbjct: 299 FVISPRDL 306


>sp|HEM1_METTP|GLUTAMYL-TRNA reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 YIVSPR 7
Y+VSPR
Sbjct: 55 YVVSPR 60


>sp|END4_METST|PROBABLE endonuclease 4|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 FYIVSPRDV 9
FY+ +P DV
Sbjct: 253 FYLETPNDV 261


>sp|HIS6_METM6|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 2 YIVSPRD 8
YI +PRD
Sbjct: 135 YITNPRD 141


>sp|RL15_HALLT|LARGE ribosomal subunit protein uL15|Halorubrum lacusprofundi (strain

Query: 2 YIVSPRDVV 10
Y++ RDVV
Sbjct: 90 YVIDARDVV 98


>sp|PELO_PYRHO|PROTEIN pelota homolog|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FYIVSPRDVV 10
++I++P DVV
Sbjct: 27 YHIITPGDVV 36


>sp|PELO_PYRAB|PROTEIN pelota homolog|Pyrococcus abyssi (strain GE5 /

Query: 1 FYIVSPRDVV 10
++++SP D+V
Sbjct: 27 YHVISPGDIV 36


>sp|OGG1_THEVO|8-OXOGUANINE DNA glycosylase/AP lyase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 YIVSPRDVV 10
YIV RD+V
Sbjct: 92 YIVESRDIV 100


>sp|SYE_METM6|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 FYIVSPRDVV 10
F++ SP+ VV
Sbjct: 402 FFVESPKKVV 411


>sp|Y049_PYRAE|UNCHARACTERIZED serpin-like protein PAE0049|Pyrobaculum aerophilum (strain ATCC

Query: 1 FYIVSPRDV 9
YI+ PRD+
Sbjct: 224 LYIIMPRDL 232


>sp|PELO_METAR|PROTEIN pelota homolog|Methanocella arvoryzae (strain DSM 22066

Query: 2 YIVSPRDVV 10
YIV P D V
Sbjct: 30 YIVEPGDTV 38


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 YIVSPRDVV 10
YI+ P D+V
Sbjct: 435 YIIKPGDIV 443


>sp|FAU1_PYRFU|PROBABLE ribonuclease FAU-1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FYIVSPRDVV 10
F IV P DV+
Sbjct: 28 FKIVQPSDVI 37


>sp|FAU1_PYRAB|PROBABLE ribonuclease FAU-1|Pyrococcus abyssi (strain GE5 /

Query: 1 FYIVSPRDVV 10
F IV P DV+
Sbjct: 28 FKIVQPSDVI 37


>sp|SPEE_PYRIL|POLYAMINE aminopropyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 VSPRDVV 10
+SPRDV+
Sbjct: 79 ISPRDVL 85


>sp|Y1404_METJA|UNCHARACTERIZED protein MJ1404|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FYIVSPRDVV 10
+Y++S RD++
Sbjct: 53 YYLISMRDLL 62




71|Sequence|351|360|PRDVVVAKER

>sp|KHSE_PYRFU|HOMOSERINE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PRDVVVAKE 9
PRD V+AKE
Sbjct: 26 PRDTVIAKE 34


>sp|ENDA_THEVO|TRNA-SPLICING endonuclease|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PRDVVVAKE 9
PR VVV +E
Sbjct: 103 PRSVVVVRE 111


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PRDVVVAKE 9
P+DV+++KE
Sbjct: 868 PQDVILSKE 876


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 PRDVVVAKE 9
P+D++++KE
Sbjct: 870 PQDIILSKE 878


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 PRDVVVAKE 9
P+D++++KE
Sbjct: 867 PQDIILSKE 875


>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii (strain

Query: 1 PRDVVVAKE 9
PRD+ V+KE
Sbjct: 321 PRDLQVSKE 329


>sp|Y1225_METJA|UNCHARACTERIZED protein MJ1225|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RDVVVAKE 9
RDV+ AKE
Sbjct: 231 RDVITAKE 238


>sp|G1PDH_METMJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanoculleus marisnigri (strain ATCC

Query: 1 PRDVVVAKE 9
PRDVV+ +
Sbjct: 23 PRDVVIGHD 31


>sp|PANB_HYPBU|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 RDVVVAKER 10
RD+V AK+R
Sbjct: 10 RDIVRAKQR 18




72|Sequence|356|365|VAKERDQDDH

>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VAKERDQDD 9
VAKE+ +DD
Sbjct: 665 VAKEKYEDD 673


>sp|NIFK_METMI|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 1 VAKERDQD 8
VAKE D+D
Sbjct: 365 VAKESDED 372


>sp|NIFK_METMP|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 1 VAKERDQD 8
VAKE D+D
Sbjct: 365 VAKESDED 372


>sp|PURL_HALLT|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 AKERDQDDH 10
A ERD DD+
Sbjct: 77 AAERDADDY 85




73|Sequence|361|370|DQDDHIDWLL

>sp|G1PDH_THESM|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus sibiricus (strain DSM 12597

Query: 2 QDDHIDWLL 10
++++IDWLL
Sbjct: 84 RNENIDWLL 92


>sp|GFCR_METLZ|TRANSCRIPTIONAL regulator GfcR|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 QDDHIDW 8
+D HIDW
Sbjct: 50 KDVHIDW 56


>sp|GFCR_METMJ|TRANSCRIPTIONAL regulator GfcR|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 QDDHIDW 8
+D HIDW
Sbjct: 49 KDVHIDW 55


>sp|GFCR_METPE|TRANSCRIPTIONAL regulator GfcR|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 QDDHIDW 8
+D HIDW
Sbjct: 49 KDVHIDW 55


>sp|GFCR_METHJ|TRANSCRIPTIONAL regulator GfcR|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 QDDHIDW 8
+D HIDW
Sbjct: 49 KDVHIDW 55


>sp|TMCA_HALMA|TRNA(MET) cytidine acetyltransferase TmcA|Haloarcula marismortui (strain ATCC

Query: 4 DHIDWL 9
DH+DW+
Sbjct: 574 DHVDWV 579


>sp|AMPP2_ARCFU|AMP phosphorylase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QDDHIDWLL 10
Q+D I W++
Sbjct: 136 QNDEIQWMI 144


>sp|GFCR_METB6|TRANSCRIPTIONAL regulator GfcR|Methanoregula boonei (strain DSM 21154

Query: 2 QDDHIDW 8
+D HIDW
Sbjct: 50 KDVHIDW 56


>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 3 DDHIDWL 9
DD ++WL
Sbjct: 135 DDEVEWL 141


>sp|DPHB_METMA|DIPHTHINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DQDDHIDWL 9
D + H DWL
Sbjct: 61 DVEQHPDWL 69


>sp|DPHB_METBF|DIPHTHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DQDDHIDWL 9
D + H DWL
Sbjct: 61 DVEQHPDWL 69


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DDHIDWL 9
DD ++WL
Sbjct: 135 DDEVEWL 141


>sp|SYFB_METMJ|PHENYLALANINE--TRNA ligase beta subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 QDDHID 7
+DDH+D
Sbjct: 37 EDDHVD 42


>sp|RPO1C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanocaldococcus jannaschii (strain

Query: 1 DQDDHIDW 8
DQD+ + W
Sbjct: 130 DQDEKVHW 137


>sp|AMPPA_METMA|AMP phosphorylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DDHIDWL 9
DD ++WL
Sbjct: 136 DDEVEWL 142


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 DQDDHIDWLL 10
+QD+ +D+LL
Sbjct: 651 EQDEDLDYLL 660


>sp|PURP_METBF|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DQDDHIDWLL 10
D+D +WLL
Sbjct: 123 DRDKEREWLL 132


>sp|PURP_METAC|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina acetivorans (strain ATCC

Query: 1 DQDDHIDWLL 10
D+D +WLL
Sbjct: 123 DRDKEREWLL 132


>sp|BACS2_HALVA|SENSORY rhodopsin-2|Haloarcula vallismortis (Halobacterium vallismortis)

Query: 5 HIDWLL 10
++DWLL
Sbjct: 73 YVDWLL 78


>sp|BACS2_HALMA|SENSORY rhodopsin II|Haloarcula marismortui (strain ATCC 43049

Query: 5 HIDWLL 10
++DWLL
Sbjct: 73 YVDWLL 78


>sp|SYT_METJA|THREONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DDHIDWLL 10
D+H DW
Sbjct: 384 DEHRDWFF 391


>sp|MNTP_METMA|MANGANESE exporter MntP|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 DHIDWL 9
+H+DW+
Sbjct: 181 EHMDWI 186


>sp|IF2P_METMJ|PROBABLE translation initiation factor IF-2|Methanoculleus marisnigri

Query: 3 DDHIDW 8
DD+++W
Sbjct: 442 DDYVEW 447


>sp|RL15E_THEVO|LARGE ribosomal subunit protein eL15|Thermoplasma volcanium (strain ATCC

Query: 3 DDHIDWL 9
D HI W+
Sbjct: 146 DPHISWI 152


>sp|RL15E_THEAC|LARGE ribosomal subunit protein eL15|Thermoplasma acidophilum (strain

Query: 3 DDHIDWL 9
D HI W+
Sbjct: 146 DPHISWI 152


>sp|PYLS_METBU|PYRROLYSINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DQDDHID 7
D+DDH++
Sbjct: 241 DKDDHLN 247


>sp|SYW_THEVO|TRYPTOPHAN--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DQDDHIDWLL 10
DQ D+ID L
Sbjct: 24 DQSDNIDHFL 33


>sp|Y3270_HALS3|UNCHARACTERIZED solute-binding protein OE_3270R|Halobacterium salinarum (strain

Query: 3 DDHIDWLL 10
D H DW L
Sbjct: 100 DAHADWAL 107


>sp|Y1595_HALSA|UNCHARACTERIZED solute-binding protein VNG_1595C|Halobacterium salinarum (strain

Query: 3 DDHIDWLL 10
D H DW L
Sbjct: 100 DAHADWAL 107


>sp|SYFB_ARCFU|PHENYLALANINE--TRNA ligase beta subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QDDHID 7
+DDH+D
Sbjct: 37 EDDHVD 42


>sp|KTHY1_SACS2|PROBABLE thymidylate kinase 1|Saccharolobus solfataricus (strain ATCC

Query: 1 DQDDHIDWL 9
D++ H++WL
Sbjct: 67 DREIHVNWL 75




74|Sequence|366|375|IDWLLEKKKY

>sp|APAUH_THEKO|N(1)-AMINOPROPYLAGMATINE ureohydrolase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IDWLLEKKK 9
I+WL+EKK+
Sbjct: 242 IEWLVEKKE 250


>sp|Y980_PYRAB|UPF0282 protein PYRAB09800|Pyrococcus abyssi (strain GE5 /

Query: 1 IDWLLEK 7
IDW++EK
Sbjct: 194 IDWIIEK 200


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 2 DWLLEKKK 9
DW +E+KK
Sbjct: 757 DWYIERKK 764


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DWLLEKKK 9
DW +E+KK
Sbjct: 888 DWYIERKK 895


>sp|HMGCS_METMP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain DSM 14266

Query: 4 LLEKKKY 10
LLE+KKY
Sbjct: 328 LLEQKKY 334


>sp|GFCR_METPE|TRANSCRIPTIONAL regulator GfcR|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 IDWLLEKKK 9
+ WLL +KK
Sbjct: 35 VTWLLTQKK 43


>sp|NIFK_METBA|NITROGENASE molybdenum-iron protein beta chain|Methanosarcina barkeri

Query: 2 DWLLE 6
DWLLE
Sbjct: 449 DWLLE 453


>sp|KTHY_STAMF|PROBABLE thymidylate kinase|Staphylothermus marinus (strain ATCC 43588

Query: 1 IDWLLEKKKY 10
I+W+LE KY
Sbjct: 111 IEWVLEINKY 120


>sp|GLPK_HALSA|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 DWLLEK 7
DWLLE+
Sbjct: 209 DWLLEE 214


>sp|GLPK_HALS3|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 29341

Query: 2 DWLLEK 7
DWLLE+
Sbjct: 209 DWLLEE 214


>sp|AGMT_PYRHO|AGMATINASE horikoshii (strain ATCC 700860

Query: 1 IDWLLEKKK 9
++WL ++KK
Sbjct: 240 LEWLTKRKK 248


>sp|HMGCS_METM7|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C7 /

Query: 4 LLEKKKY 10
LLE KKY
Sbjct: 328 LLESKKY 334


>sp|HMGCS_METM6|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C6 /

Query: 4 LLEKKKY 10
LLE KKY
Sbjct: 328 LLESKKY 334


>sp|HMGCS_METM5|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C5 /

Query: 4 LLEKKKY 10
LLE KKY
Sbjct: 328 LLESKKY 334


>sp|PURL_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DWLLEKKK 9
+W++EK K
Sbjct: 656 EWIVEKSK 663


>sp|ARGD_ARCFU|ACETYLORNITHINE aminotransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IDWLLEKKKY 10
+DW+ +KK+
Sbjct: 1 MDWIEREKKH 10


>sp|TRUA_METTP|TRNA pseudouridine synthase A|Methanothrix thermoacetophila (strain DSM

Query: 1 IDWLLE 6
+DW+LE
Sbjct: 193 VDWILE 198


>sp|MOBA_THESM|PROBABLE molybdenum cofactor guanylyltransferase|Thermococcus sibiricus

Query: 1 IDWLLEK 7
+DW++EK
Sbjct: 102 VDWIVEK 108


>sp|AAT_PYRHO|ASPARTATE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DWLLEKKK 9
+WLLEK +
Sbjct: 341 EWLLEKAR 348




75|Sequence|371|380|EKKKYEEALM

>sp|OFOB2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 2 KKKYEEALM 10
+KK+E+A+M
Sbjct: 233 QKKFEQAIM 241


>sp|FEN_STAMF|FLAP endonuclease 1|Staphylothermus marinus (strain ATCC 43588

Query: 3 KKYEEAL 9
KKYEEAL
Sbjct: 107 KKYEEAL 113


>sp|PGP_THEKO|PHOSPHOGLYCOLATE phosphatase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KKKYEEALM 10
KK+Y EAL+
Sbjct: 98 KKRYPEALL 106


>sp|Y1345_METJA|TPR repeat-containing protein MJ1345|Methanocaldococcus jannaschii

Query: 1 EKKKYEEALM 10
EK+ YE+AL+
Sbjct: 24 EKRNYEKALL 33


>sp|KCY_PYRNV|CYTIDYLATE kinase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 EKKKYEEAL 9
+KK +EEAL
Sbjct: 113 DKKSFEEAL 121


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 3 KKYEEALM 10
+ YEEALM
Sbjct: 385 RSYEEALM 392


>sp|MDH_AERPE|MALATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EKKKYEEAL 9
EK+K++EA+
Sbjct: 284 EKRKFDEAV 292


>sp|TYW1_PYRHO|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus horikoshii (strain ATCC

Query: 1 EKKKYEEA 8
+KKK+EEA
Sbjct: 132 DKKKFEEA 139


>sp|TYW1_PYRAB|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 EKKKYEEA 8
+KKK+EEA
Sbjct: 132 DKKKFEEA 139


>sp|QUEC_PYRFU|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KKKYEEALM 10
KK+Y+E +M
Sbjct: 23 KKQYDEVIM 31


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EKKKYEEAL 9
E+KK+EE L
Sbjct: 406 EQKKFEETL 414


>sp|KCY_PYRIL|CYTIDYLATE kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 EKKKYEEAL 9
+KK +E+AL
Sbjct: 113 DKKSFEDAL 121




76|Sequence|376|385|EEALMAAEIS

***** No hits found ******


77|Sequence|381|390|AAEISQKNIK

>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 1 AAEISQKNIK 10
A EIS+KN++
Sbjct: 90 AVEISKKNMQ 99


>sp|RL12_SULAC|LARGE ribosomal subunit protein P1|Sulfolobus acidocaldarius (strain

Query: 3 EISQKNIK 10
EIS++NIK
Sbjct: 16 EISEENIK 23


>sp|SRP54_PYRNV|SIGNAL recognition particle 54 kDa|Pyrobaculum neutrophilum (strain DSM

Query: 3 EISQKNIK 10
E+SQKN+K
Sbjct: 360 ELSQKNLK 367


>sp|IF2A_ARCFU|TRANSLATION initiation factor 2 subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 AEISQKNIK 10
AEI+++NIK
Sbjct: 168 AEIARENIK 176


>sp|SRP54_PYRAR|SIGNAL recognition particle 54 kDa|Pyrobaculum arsenaticum (strain DSM

Query: 3 EISQKNIK 10
E+SQKN+K
Sbjct: 360 ELSQKNLK 367




78|Sequence|386|395|QKNIKRHKIL

>sp|RL6_SULAC|LARGE ribosomal subunit protein uL6|Sulfolobus acidocaldarius (strain

Query: 1 QKNIKRHKIL 10
+KNI+R KIL
Sbjct: 119 EKNIRRAKIL 128


>sp|RL6_SULTO|LARGE ribosomal subunit protein uL6|Sulfurisphaera tokodaii (strain DSM

Query: 1 QKNIKRHKIL 10
+KNI+R KI+
Sbjct: 116 EKNIRRAKIM 125


>sp|MCRC_METTH|METHYL-COENZYME M reductase I operon|Methanothermobacter thermautotrophicus (strain

Query: 2 KNIKRHKIL 10
+ +KRHK+L
Sbjct: 98 EQMKRHKLL 106


>sp|RRP42_METKA|EXOSOME complex component Rrp42|Methanopyrus kandleri (strain AV19 /

Query: 4 IKRHKIL 10
IKRH++L
Sbjct: 9 IKRHEVL 15


>sp|AGO_METJA|PROTEIN argonaute|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KNIKRHKIL 10
KNI++HK++
Sbjct: 121 KNIRKHKVV 129


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 2 KNIKRHKI 9
KNI+ HK+
Sbjct: 368 KNIQDHKV 375


>sp|SYR_SULTO|ARGININE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QKNIKRHK 8
KNIK HK
Sbjct: 321 SKNIKEHK 328


>sp|CAS3_METJA|PUTATIVE CRISPR-associated nuclease/helicase Cas3|Methanocaldococcus

Query: 2 KNIKRHKIL 10
KN KR+KI+
Sbjct: 245 KNFKRNKII 253




79|Sequence|391|400|RHKILDIGLA

>sp|RELB3_METJA|ANTITOXIN RelB3|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HKILDIGLA 10
+ILDIGLA
Sbjct: 21 EEILDIGLA 29


>sp|RL18_METMJ|LARGE ribosomal subunit protein uL18|Methanoculleus marisnigri (strain

Query: 4 ILDIGLA 10
ILDIGLA
Sbjct: 102 ILDIGLA 108


>sp|PGK_ARCFU|PHOSPHOGLYCERATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RHKILDIGL 9
+++I+DIGL
Sbjct: 296 KYRIMDIGL 304


>sp|SYW_HYPBU|TRYPTOPHAN--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 RHKILDIGL 9
R KI++IGL
Sbjct: 121 RRKIIEIGL 129


>sp|RS5_IGNH4|SMALL ribosomal subunit protein uS5|Ignicoccus hospitalis (strain

Query: 1 RHKILDIGL 9
+H++LD+ L
Sbjct: 52 KHEVLDVSL 60


>sp|PIMT2_METAC|PROTEIN-L-ISOASPARTATE O-methyltransferase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 HKILDIG 8
HK+L+IG
Sbjct: 100 HKVLEIG 106


>sp|PIMT_METMA|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HKILDIG 8
HK+L+IG
Sbjct: 105 HKVLEIG 111


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 HKILDI 7
HK+LDI
Sbjct: 566 HKVLDI 571


>sp|PURO_THEKO|IMP cyclohydrolase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 HKILDIGL 9
HK+L IG+
Sbjct: 176 HKVLAIGI 183


>sp|GLMM_THEGJ|PROBABLE phosphoglucosamine mutase|Thermococcus gammatolerans (strain DSM

Query: 3 KILDIGLA 10
+++DIGLA
Sbjct: 66 EVIDIGLA 73


>sp|RL18_AERPE|LARGE ribosomal subunit protein uL18|Aeropyrum pernix (strain ATCC 700893

Query: 1 RHKILDIGL 9
R +LD+GL
Sbjct: 100 REAVLDVGL 108


>sp|RL18_PYRNV|LARGE ribosomal subunit protein uL18|Pyrobaculum neutrophilum (strain DSM

Query: 1 RHKILDIGL 9
R +LDIGL
Sbjct: 99 REAVLDIGL 107


>sp|PIMT_METKA|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 HKILDIG 8
HK+L++G
Sbjct: 84 HKVLEVG 90


>sp|URE1_SULTO|UREASE subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 HKILDIGL 9
HK+ D+GL
Sbjct: 379 HKMKDLGL 386




80|Sequence|396|405|DIGLAYINHL

>sp|HIS7_ARCFU|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DIGLAYINHL 10
D G+A+++H+
Sbjct: 24 DTGIAFLDHM 33


>sp|PUR1_PYRAB|AMIDOPHOSPHORIBOSYLTRANSFERASE abyssi (strain GE5 /

Query: 2 IGLAYINH 9
IG++++NH
Sbjct: 135 IGISFLNH 142


>sp|Y2225_ARCFU|UNCHARACTERIZED protein AF_2225|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IGLAYINH 9
+GL YI+H
Sbjct: 49 VGLNYIDH 56


>sp|Y1656_METJA|UNCHARACTERIZED protein MJ1656|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IGLAYINH 9
+GL YI+H
Sbjct: 43 VGLNYIDH 50


>sp|HIS7_METKA|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 1 DIGLAYINHL 10
D GL + +HL
Sbjct: 33 DTGLPFFDHL 42


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 DIGLAYI 7
D+GL YI
Sbjct: 823 DVGLGYI 829


>sp|MFNA_METHJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanospirillum hungatei JF-1

Query: 1 DIGLAYINHL 10
D G +Y++H+
Sbjct: 359 DFGESYVSHI 368


>sp|BIOW_METJA|6-CARBOXYHEXANOATE--COA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 YINHL 10
YINHL
Sbjct: 66 YINHL 70


>sp|FOLD_THEAC|BIFUNCTIONAL protein FolD|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DIGLAYIN 8
D+G+ Y+N
Sbjct: 220 DVGINYVN 227


>sp|CBIX_HALSA|PROBABLE sirohydrochlorin cobaltochelatase|Halobacterium salinarum (strain

Query: 1 DIGLAYINH 9
D GLA + H
Sbjct: 144 DFGLAVVGH 152




81|Sequence|401|410|YINHLVERGD

>sp|METX_METTH|PROBABLE acyltransferase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 YINHLVERGD 10
Y+NHL+E GD
Sbjct: 173 YMNHLIE-GD 181


>sp|TRPB_METKA|TRYPTOPHAN synthase beta chain|Methanopyrus kandleri (strain AV19 /

Query: 1 YINHLVERGD 10
Y+ LVERG+
Sbjct: 359 YVKKLVERGE 368


>sp|MUTS1_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 1 YINHLVERG 9
Y++ LVERG
Sbjct: 72 YVSALVERG 80


>sp|Y090_METJA|UNCHARACTERIZED protease MJ0090|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 INHLVERGD 10
+NHLV GD
Sbjct: 390 LNHLVREGD 398


>sp|FRHB_METVO|COENZYME F420 hydrogenase subunit beta|Methanococcus voltae

Query: 1 YINHLVERG 9
YIN +VE G
Sbjct: 228 YINKMVEAG 236


>sp|CSM5_METJA|CRISPR system Cms protein Csm5|Methanocaldococcus jannaschii (strain

Query: 1 YINHLVERG 9
Y +HL++RG
Sbjct: 35 YYSHLIQRG 43


>sp|AATF_DESSY|A-TYPE ATP synthase subunit F|Desulfurococcus sp. (strain SY)

Query: 2 INHLVERGD 10
+ LVERGD
Sbjct: 40 LKELVERGD 48


>sp|RF1_THEVO|PEPTIDE chain release factor subunit|Thermoplasma volcanium (strain ATCC

Query: 1 YINHLVERGD 10
++ H+ RGD
Sbjct: 94 FVGHIATRGD 103


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YINHLVERGD 10
YIN L E+G+
Sbjct: 412 YINSLKEKGE 421


>sp|PELO_METS3|PROTEIN pelota homolog|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 YINHLVERGD 10
+++H+VE GD
Sbjct: 25 HLSHIVEVGD 34


>sp|XACJ_HALVD|XYLOSE/ARABINOSE import ATP-binding protein XacJ|Haloferax volcanii (strain ATCC

Query: 4 HLVERGD 10
HLV RGD
Sbjct: 339 HLVTRGD 345


>sp|RF1_PICTO|PEPTIDE chain release factor subunit|Picrophilus torridus (strain ATCC

Query: 1 YINHLVERGD 10
++ H+ RGD
Sbjct: 90 FVGHIATRGD 99


>sp|PELO_METTH|PROTEIN pelota homolog|Methanothermobacter thermautotrophicus (strain

Query: 1 YINHLVERGD 10
+++H++E GD
Sbjct: 25 HLSHIIEEGD 34


>sp|MT51_METJA|PUTATIVE type II methyltransferase M.MJ0563P|Methanocaldococcus jannaschii

Query: 1 YINHLVERGD 10
Y+N+ +R D
Sbjct: 110 YVNYFTQRND 119


>sp|RLME_METBF|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina barkeri

Query: 3 NHLVERGD 10
+H++ RGD
Sbjct: 33 HHIINRGD 40


>sp|PELO_PYRNV|PROTEIN pelota homolog|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 YINHLVERGD 10
++ LVERGD
Sbjct: 24 FVYLLVERGD 33


>sp|GCSPA_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 1 YINHLVERGD 10
++ HL+ER +
Sbjct: 84 HVKHLIERSE 93


>sp|UVRB_METMA|UVRABC system protein B|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 INHLVERGD 10
I +VERGD
Sbjct: 458 IRKIVERGD 466


>sp|NIFE_METTH|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 2 INHLVERGD 10
++H++ RGD
Sbjct: 199 LDHVIGRGD 207


>sp|ARFB_METMP|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus maripaludis (strain

Query: 1 YINHLVERG 9
YI +LVE G
Sbjct: 86 YIKYLVENG 94


>sp|ARFB_META3|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus aeolicus (strain ATCC

Query: 1 YINHLVERG 9
YI+ LVE+G
Sbjct: 103 YIDFLVEQG 111


>sp|ARFB_METM5|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus maripaludis (strain C5

Query: 1 YINHLVERG 9
YI +LVE G
Sbjct: 86 YIKYLVENG 94


>sp|HIS7_CALMQ|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 YINHLVE 7
++NH+VE
Sbjct: 35 FLNHMVE 41


>sp|NIFE_METTM|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 2 INHLVERGD 10
+ H++ RGD
Sbjct: 202 LRHIIGRGD 210


>sp|DAPA_METTH|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 INHLVERG 9
IN+L+E G
Sbjct: 29 INYLIENG 36


>sp|ARFB_METM7|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus maripaludis (strain C7

Query: 1 YINHLVERG 9
YI +LVE G
Sbjct: 86 YIKYLVENG 94




82|Sequence|406|415|VERGDYDIAA

>sp|RNP4_HYPBU|RIBONUCLEASE P protein component 4|Hyperthermus butylicus (strain DSM 5456

Query: 1 VERGDYDIA 9
V RGDY++A
Sbjct: 31 VRRGDYELA 39


>sp|ALAXM_PYRHO|ALANYL-TRNA editing protein AlaX-M|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VERGDYDIA 9
VE+G YDIA
Sbjct: 127 VEKGRYDIA 135


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VERGDYDI 8
+ERGD+D+
Sbjct: 178 LERGDFDV 185


>sp|FAU1_SACI2|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VERGDYDI 8
+E GDYDI
Sbjct: 321 IENGDYDI 328


>sp|FAU1_SACI6|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VERGDYDI 8
+E GDYDI
Sbjct: 321 IENGDYDI 328


>sp|FAU1_SACI4|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VERGDYDI 8
+E GDYDI
Sbjct: 321 IENGDYDI 328


>sp|FAU1_SACI3|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.27)

Query: 1 VERGDYDI 8
+E GDYDI
Sbjct: 321 IENGDYDI 328


>sp|FAU1_SACS2|PROBABLE ribonuclease FAU-1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VERGDYDI 8
+E GDYDI
Sbjct: 321 IEEGDYDI 328


>sp|FAU1_SACI7|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VERGDYDI 8
+E GDYDI
Sbjct: 321 IENGDYDI 328


>sp|FAU1_SULTO|PROBABLE ribonuclease FAU-1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ERGDYDI 8
E GDYDI
Sbjct: 317 EEGDYDI 323


>sp|SYG_THEGJ|GLYCINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 RGDYDIA 9
RGDYD++
Sbjct: 331 RGDYDLS 337


>sp|SYG_THEKO|GLYCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 RGDYDIA 9
RGDYD++
Sbjct: 331 RGDYDLS 337


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 RGDYDIA 9
RGDYD++
Sbjct: 335 RGDYDLS 341


>sp|HTR4_HALSA|TRANSDUCER protein Htr4|Halobacterium salinarum (strain ATCC 700922

Query: 1 VERGDYD 7
+ERG+YD
Sbjct: 334 LERGEYD 340


>sp|HTR4_HALS3|TRANSDUCER protein Htr4|Halobacterium salinarum (strain ATCC 29341

Query: 1 VERGDYD 7
+ERG+YD
Sbjct: 334 LERGEYD 340


>sp|MOBA_PYRFU|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus furiosus (strain

Query: 1 VERGDYDIA 9
+ERG+Y +
Sbjct: 145 IERGEYKVG 153


>sp|SYY_THESM|TYROSINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 VERGDY 6
+ERGDY
Sbjct: 125 LERGDY 130


>sp|Y1556_METMJ|UPF0200 protein Memar_1556|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 RGDYDIA 9
RGDY++A
Sbjct: 89 RGDYEVA 95


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 ERGDYDI 8
E+GD+DI
Sbjct: 188 EKGDFDI 194


>sp|HPRT_METRM|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanobrevibacter ruminantium (strain

Query: 1 VERGDYD 7
V++GDYD
Sbjct: 15 VKKGDYD 21


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VERGDYDI 8
+ RG+YDI
Sbjct: 796 ITRGNYDI 803


>sp|RPO3_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum aerophilum (strain ATCC

Query: 1 VERGDYDIAA 10
VERG+Y + A
Sbjct: 7 VERGEYFLKA 16


>sp|PYRC_METKA|DIHYDROOROTASE kandleri (strain AV19 /

Query: 1 VERGDYDIAA 10
V RGD D+ A
Sbjct: 286 VRRGDVDVLA 295


>sp|HPRT_METIK|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanotorris igneus (strain DSM 5666

Query: 1 VERGDYD 7
V+RGDY+
Sbjct: 13 VKRGDYE 19


>sp|WECC_METMP|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 2 ERGDYDI 8
+ GDYDI
Sbjct: 3 KHGDYDI 9


>sp|FAU1_METKA|PROBABLE ribonuclease FAU-1|Methanopyrus kandleri (strain AV19 /

Query: 1 VERGDYDIA 9
+E+GDY I+
Sbjct: 369 IEKGDYAIS 377


>sp|HPRT_METPW|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanobacterium paludis (strain DSM

Query: 1 VERGDYD 7
V++GDYD
Sbjct: 15 VKKGDYD 21


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 2 ERGDYDI 8
E+GD+D+
Sbjct: 392 EKGDFDV 398


>sp|Y2187_ARCFU|UNCHARACTERIZED protein AF_2187|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RGDYDIAA 10
RG+YD+ A
Sbjct: 78 RGEYDVKA 85


>sp|RL14_KORCO|LARGE ribosomal subunit protein uL14|Korarchaeum cryptofilum (strain

Query: 1 VERGDYDI 8
V+RG YD+
Sbjct: 66 VKRGKYDL 73


>sp|SYFA_HALSA|PHENYLALANINE--TRNA ligase alpha subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 VERGDYDIAA 10
VE DY++AA
Sbjct: 215 VEFADYNVAA 224


>sp|SYFA_HALS3|PHENYLALANINE--TRNA ligase alpha subunit|Halobacterium salinarum (strain ATCC 29341

Query: 1 VERGDYDIAA 10
VE DY++AA
Sbjct: 215 VEFADYNVAA 224




83|Sequence|411|420|YDIAARKCQK

>sp|SYS_METBF|SERINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YDIAARKC 8
YDIA RKC
Sbjct: 34 YDIAWRKC 41


>sp|SYS_METAC|SERINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YDIAARKC 8
YD+A RKC
Sbjct: 34 YDVAWRKC 41


>sp|Y2318_METBF|PUTATIVE HTH-type transcriptional regulatory protein|Methanosarcina

Query: 1 YDIAARK 7
+D+AARK
Sbjct: 32 FDVAARK 38


>sp|Y444_METMA|PUTATIVE HTH-type transcriptional regulatory protein|Methanosarcina mazei

Query: 1 YDIAARK 7
+D+AARK
Sbjct: 32 FDVAARK 38


>sp|CDC6_METST|ORC1-TYPE DNA replication protein|Methanosphaera stadtmanae (strain ATCC

Query: 1 YDIAARKCQK 10
Y I AR CQ+
Sbjct: 102 YQILARLCQQ 111


>sp|Y3524_METAC|PUTATIVE HTH-type transcriptional regulatory protein|Methanosarcina

Query: 1 YDIAARK 7
+D+AARK
Sbjct: 32 FDVAARK 38


>sp|SYC_IGNH4|CYSTEINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 YDIAARKCQK 10
YD A KC K
Sbjct: 175 YDFALWKCAK 184


>sp|MPTB_METJA|DIHYDRONEOPTERIN 2',3'-cyclic phosphate phosphodiesterase|Methanocaldococcus

Query: 2 DIAARKCQ 9
D+A R CQ
Sbjct: 175 DVAVRVCQ 182


>sp|TRM1_HALMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloarcula marismortui

Query: 1 YDIAAR 6
YDIAAR
Sbjct: 192 YDIAAR 197




84|Sequence|416|425|RKCQKILGKN

>sp|Y812_METJA|UNCHARACTERIZED protein MJ0812|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RKCQKILGK 9
RKC +ILGK
Sbjct: 320 RKCLEILGK 328


>sp|Y418_METJA|UNCHARACTERIZED protein MJ0418|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CQKILGKN 10
C+KIL KN
Sbjct: 51 CEKILNKN 58


>sp|OGT_PYRHO|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 CQKILGKN 10
C +++GKN
Sbjct: 142 CHRVVGKN 149


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KCQKILGKN 10
K +KILG N
Sbjct: 416 KAKKILGNN 424


>sp|COFF_METJA|COENZYME gamma-F420-2:alpha-L-glutamate ligase|Methanocaldococcus jannaschii

Query: 2 KCQKILGKN 10
KC K+L KN
Sbjct: 99 KCIKLLAKN 107


>sp|PORB_METTM|PYRUVATE synthase subunit PorB|Methanothermobacter marburgensis (strain

Query: 1 RKCQKILGKN 10
R K+LGKN
Sbjct: 26 RLALKVLGKN 35


>sp|PORB_METTH|PYRUVATE synthase subunit PorB|Methanothermobacter thermautotrophicus

Query: 1 RKCQKILGKN 10
R K+LGKN
Sbjct: 26 RLALKVLGKN 35




85|Sequence|421|430|ILGKNAALWE

>sp|RRP4_METST|EXOSOME complex component Rrp4|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ILGKNAALW 9
I+GKN +W
Sbjct: 174 IIGKNGLIW 182


>sp|LEUC1_ARCFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Archaeoglobus fulgidus (strain ATCC

Query: 1 ILGKNAALWE 10
ILG +A +W+
Sbjct: 48 ILGSDAKVWD 57


>sp|KORC_METJA|2-OXOGLUTARATE synthase subunit KorC|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ILGKNAALWE 10
ILG+ AAL++
Sbjct: 28 ILGRAAALYD 37


>sp|RRP4_METFV|EXOSOME complex component Rrp4|Methanothermus fervidus (strain ATCC 43054

Query: 1 ILGKNAALW 9
+LG+N +W
Sbjct: 174 LLGQNGVIW 182


>sp|ILVC_METVS|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus vannielii (strain ATCC

Query: 2 LGKNAALWE 10
L KN A WE
Sbjct: 46 LRKNGASWE 54


>sp|RRP4_THEVO|EXOSOME complex component Rrp4|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ILGKNAALW 9
I+G+N +W
Sbjct: 176 IIGQNGLIW 184


>sp|RRP4_THEAC|EXOSOME complex component Rrp4|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ILGKNAALW 9
I+G+N +W
Sbjct: 176 IIGQNGLIW 184


>sp|RRP4_METBU|EXOSOME complex component Rrp4|Methanococcoides burtonii (strain DSM 6242

Query: 2 LGKNAALW 9
+GKN +W
Sbjct: 171 VGKNGRIW 178




86|Sequence|426|435|AALWEYEVYK

>sp|PSB_METPS|PROTEASOME subunit beta|Methanocella paludicola (strain DSM 17711

Query: 3 LWEYEVY 9
LWEY ++
Sbjct: 95 LWEYRIF 101


>sp|GATE_CALMQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Caldivirga maquilingensis (strain ATCC

Query: 1 AALWEYEVYK 10
AALWE+ K
Sbjct: 61 AALWEFRKMK 70


>sp|COBQ_ARCFU|PROBABLE cobyric acid synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LWEYEVYK 10
+W YE++K
Sbjct: 384 VWGYEIHK 391


>sp|GVPL2_HALSA|GAS vesicle protein L2|Halobacterium salinarum (strain ATCC 700922

Query: 1 AALWEYEV 8
A WEY V
Sbjct: 126 AGCWEYRV 133


>sp|Y1001_ARCFU|UNCHARACTERIZED protein AF_1001|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LWEYEV 8
+WEYEV
Sbjct: 166 VWEYEV 171


>sp|Y1180_METJA|UNCHARACTERIZED protein MJ1180|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 EYEVYK 10
EYE+YK
Sbjct: 71 EYELYK 76


>sp|GVPL1_HALSA|GAS vesicle protein L1|Halobacterium salinarum (strain ATCC 700922

Query: 1 AALWEYEV 8
A +WEY +
Sbjct: 134 AGVWEYRI 141




87|Sequence|431|440|YEVYKFKEIG

>sp|RADB_ARCFU|DNA repair and recombination protein|Archaeoglobus fulgidus (strain

Query: 1 YEVYKFKEIG 10
YEVY+F++ G
Sbjct: 83 YEVYRFRQQG 92


>sp|Y1650_METJA|UNCHARACTERIZED protein MJ1650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YEVYKFKEIG 10
YEVY+F IG
Sbjct: 344 YEVYEFDNIG 353


>sp|SYS_METS5|SERINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 YEVYKFKEIG 10
YE+ KFK +G
Sbjct: 151 YEIIKFKPVG 160


>sp|SYR_AERPE|ARGININE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 YEVYKFKEIG 10
Y VYKF+ G
Sbjct: 389 YSVYKFRVTG 398


>sp|HIS4_METVS|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus vannielii (strain

Query: 2 EVYKFKEIG 10
++ KFKEIG
Sbjct: 205 DLLKFKEIG 213


>sp|HIS4_METVA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus vannielii

Query: 2 EVYKFKEIG 10
++ KFKEIG
Sbjct: 205 DLLKFKEIG 213


>sp|HIS4_METM6|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis (strain

Query: 2 EVYKFKEIG 10
++ KFKEIG
Sbjct: 205 DLLKFKEIG 213


>sp|HIS4_METM5|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis (strain

Query: 2 EVYKFKEIG 10
++ KFKEIG
Sbjct: 205 DLLKFKEIG 213


>sp|SYC_PYRHO|CYSTEINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YEVYKFKEIG 10
+EV KFKE G
Sbjct: 144 FEVQKFKEYG 153


>sp|G3P_THEON|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 1 YEVYKFKEIG 10
+E Y+ KE+G
Sbjct: 39 FEAYRAKELG 48


>sp|G3P_PYRHO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YEVYKFKEIG 10
+E Y+ KE+G
Sbjct: 39 FEAYRAKELG 48


>sp|G3P_PYRAB|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 YEVYKFKEIG 10
+E Y+ KE+G
Sbjct: 39 FEAYRAKELG 48


>sp|G3P_THESM|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus sibiricus (strain DSM 12597

Query: 1 YEVYKFKEIG 10
+E Y+ KE+G
Sbjct: 39 FEAYRAKELG 48


>sp|G3P_PYRWO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus woesei

Query: 1 YEVYKFKEIG 10
+E Y+ KE+G
Sbjct: 39 FEAYRAKELG 48


>sp|G3P_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YEVYKFKEIG 10
+E Y+ KE+G
Sbjct: 39 FEAYRAKELG 48


>sp|RPO10_HYPBU|DNA-DIRECTED RNA polymerase subunit Rpo10|Hyperthermus butylicus (strain DSM

Query: 1 YEVYKFKEI 9
YEV KFK +
Sbjct: 57 YEVRKFKRV 65


>sp|Y1057_METJA|UNCHARACTERIZED glycosyltransferase MJ1057|Methanocaldococcus jannaschii (strain

Query: 2 EVYKFKEI 9
E YKFKEI
Sbjct: 144 EKYKFKEI 151


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YEVYKFKEIG 10
++ YK KE+G
Sbjct: 171 WQFYKLKEMG 180


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 YEVYKFKEIG 10
++ YK KE+G
Sbjct: 171 WQFYKLKEMG 180


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 YEVYKFKEIG 10
++ YK KE+G
Sbjct: 171 WQFYKLKEMG 180


>sp|SYH_PYRHO|HISTIDINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YEVYKFKEI 9
+E Y FKEI
Sbjct: 30 FEAYGFKEI 38


>sp|PYRE_PYRAE|OROTATE phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YEVYKFKEI 9
Y VYK +E+
Sbjct: 160 YSVYKMREL 168


>sp|PYRE_PYRAR|OROTATE phosphoribosyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 YEVYKFKEI 9
Y VYK +E+
Sbjct: 159 YSVYKMREL 167




88|Sequence|436|445|FKEIGQLKAI

>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 FKEIGQL 7
FKE+G+L
Sbjct: 440 FKEVGEL 446


>sp|GLMM_PYRAB|PROBABLE phosphoglucosamine mutase|Pyrococcus abyssi (strain GE5 /

Query: 1 FKEIGQLK 8
+ EIGQLK
Sbjct: 137 WNEIGQLK 144


>sp|ARLY_SACS2|ARGININOSUCCINATE lyase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FKEIGQ 6
FKEIGQ
Sbjct: 62 FKEIGQ 67


>sp|HELS_METMA|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FKEIGQLKAI 10
FK+IG+ +A+
Sbjct: 698 FKQIGRREAV 707




89|Sequence|441|450|QLKAISPYLP

>sp|PYRG_AERPE|CTP synthase|Aeropyrum pernix (strain ATCC 700893

Query: 4 AISPYLP 10
A+SPYLP
Sbjct: 178 ALSPYLP 184


>sp|DAPF_METJA|DIAMINOPIMELATE epimerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QLKAISPYLP 10
+LK +PYLP
Sbjct: 151 ELKLKNPYLP 160


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 KAISPYLP 10
K ISP++P
Sbjct: 759 KLISPFMP 766


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 KAISPYLP 10
K ISP++P
Sbjct: 759 KLISPFMP 766


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 KAISPYLP 10
K ISP++P
Sbjct: 759 KLISPFMP 766


>sp|PSB_METKA|PROTEASOME subunit beta|Methanopyrus kandleri (strain AV19 /

Query: 2 LKAISPYL 9
LKA PYL
Sbjct: 101 LKAFRPYL 108


>sp|KUP_METBF|PROBABLE potassium transport system protein|Methanosarcina barkeri (strain

Query: 2 LKAISPY 8
LKAI+PY
Sbjct: 193 LKAINPY 199


>sp|TREZ_SACS2|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LKAISPYLP 10
L +SPY+P
Sbjct: 406 LYILSPYIP 414


>sp|TREZ_SACSO|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (Sulfolobus

Query: 2 LKAISPYLP 10
L +SPY+P
Sbjct: 404 LYLLSPYIP 412


>sp|APGM_PYRIL|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 KAISPYL 9
KA++PYL
Sbjct: 326 KALTPYL 332


>sp|APGM_PYRAR|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 KAISPYL 9
KA++PYL
Sbjct: 326 KALAPYL 332


>sp|Y1620_METJA|UNCHARACTERIZED protein MJ1620|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KAISPYLP 10
K I+PY P
Sbjct: 266 KLINPYFP 273


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 QLKAISPY 8
QLK ++PY
Sbjct: 467 QLKRLAPY 474


>sp|APGM_PYRNV|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 KAISPYL 9
KA+SPY+
Sbjct: 326 KALSPYV 332


>sp|APGM_PYRAE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 KAISPYL 9
KA++PYL
Sbjct: 326 KALAPYL 332


>sp|APGM_PYRCJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 KAISPYL 9
KA++PYL
Sbjct: 326 KALAPYL 332




90|Sequence|446|455|SPYLPRGDPV

>sp|RADA_THEVO|DNA repair and recombination protein|Thermoplasma volcanium (strain

Query: 1 SPYLPRGDPV 10
SPYLP G+ V
Sbjct: 302 SPYLPEGETV 311


>sp|RADA_THEAC|DNA repair and recombination protein|Thermoplasma acidophilum (strain

Query: 1 SPYLPRGDPV 10
SPYLP G+ V
Sbjct: 302 SPYLPEGETV 311


>sp|RADA_PICTO|DNA repair and recombination protein|Picrophilus torridus (strain ATCC

Query: 1 SPYLPRGDPV 10
SPYLP G+ V
Sbjct: 301 SPYLPEGETV 310


>sp|RADA_METST|DNA repair and recombination protein|Methanosphaera stadtmanae (strain

Query: 1 SPYLPRGDPV 10
SP+LP G+ V
Sbjct: 292 SPHLPEGESV 301


>sp|TRPA_PYRAB|TRYPTOPHAN synthase alpha chain|Pyrococcus abyssi (strain GE5 /

Query: 2 PYLPRGDP 9
PYL GDP
Sbjct: 9 PYLTAGDP 16


>sp|RADA_ARCFU|DNA repair and recombination protein|Archaeoglobus fulgidus (strain

Query: 1 SPYLPRGDPV 10
SP+LP G+ +
Sbjct: 307 SPHLPEGEAI 316


>sp|TRPA_PYRFU|TRYPTOPHAN synthase alpha chain|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PYLPRGDP 9
PYL GDP
Sbjct: 9 PYLTAGDP 16


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 1 SPYLPRGDPV 10
SP+LP G+ V
Sbjct: 817 SPHLPEGEAV 826


>sp|RADA_METTH|DNA repair and recombination protein|Methanothermobacter

Query: 1 SPYLPRGDPV 10
SP+LP G+ V
Sbjct: 292 SPHLPEGECV 301


>sp|RADA_METS3|DNA repair and recombination protein|Methanobrevibacter smithii (strain

Query: 1 SPYLPRGDPV 10
SP+LP G+ V
Sbjct: 292 SPHLPEGECV 301


>sp|TRPA_THEKO|TRYPTOPHAN synthase alpha chain|Thermococcus kodakarensis (strain ATCC

Query: 2 PYLPRGDP 9
PYL GDP
Sbjct: 9 PYLTAGDP 16


>sp|NSUN6_PYRHO|TRNA (cytosine(72)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 1 SPYLPRG 7
SPYLP G
Sbjct: 68 SPYLPEG 74


>sp|Y1240_METJA|UNCHARACTERIZED protein MJ1240|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SPYLPR 6
SPYLP+
Sbjct: 48 SPYLPK 53


>sp|SYE_METTM|GLUTAMATE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 3 YLPRGD 8
YLPRGD
Sbjct: 446 YLPRGD 451


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 SPYLPRGD 8
SPY P GD
Sbjct: 8 SPYKPLGD 15


>sp|CDPAS_SACS2|CDP-ARCHAEOL synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PYLPRGDPV 10
P++ RG P+
Sbjct: 25 PFIKRGTPI 33


>sp|CDPAS_SACI7|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 PYLPRGDPV 10
P++ RG P+
Sbjct: 25 PFIKRGTPI 33


>sp|CDPAS_SACI6|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 PYLPRGDPV 10
P++ RG P+
Sbjct: 25 PFIKRGTPI 33


>sp|CDPAS_SACI4|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PYLPRGDPV 10
P++ RG P+
Sbjct: 25 PFIKRGTPI 33


>sp|CDPAS_SACI3|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 PYLPRGDPV 10
P++ RG P+
Sbjct: 25 PFIKRGTPI 33


>sp|CDPAS_SACI2|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 PYLPRGDPV 10
P++ RG P+
Sbjct: 25 PFIKRGTPI 33


>sp|CDPAS_SACI1|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 PYLPRGDPV 10
P++ RG P+
Sbjct: 25 PFIKRGTPI 33


>sp|RADA_AERPX|DNA repair and recombination protein|Aeropyrum pernix

Query: 1 SPYLPRGDPV 10
+P+LP G+ V
Sbjct: 298 APHLPEGETV 307


>sp|RADA_AERPE|DNA repair and recombination protein|Aeropyrum pernix (strain ATCC

Query: 1 SPYLPRGDPV 10
+P+LP G+ V
Sbjct: 298 APHLPEGETV 307


>sp|Y1513_METJA|UNCHARACTERIZED protein MJ1513|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PYLPR 6
PYLPR
Sbjct: 166 PYLPR 170


>sp|RADA_PYRFU|DNA repair and recombination protein|Pyrococcus furiosus (strain ATCC

Query: 1 SPYLPRGDPV 10
+P+LP G+ V
Sbjct: 330 APHLPEGEAV 339


>sp|NITR_PYRAB|NITRILASE abyssi (strain GE5 /

Query: 2 PYLPRGDPV 10
PY PR P+
Sbjct: 175 PYAPRAMPI 183


>sp|RADA_PYRAB|DNA repair and recombination protein|Pyrococcus abyssi (strain GE5 /

Query: 1 SPYLPRGDPV 10
+P+LP G+ V
Sbjct: 334 APHLPEGEAV 343


>sp|TRPA_HALMA|TRYPTOPHAN synthase alpha chain|Haloarcula marismortui (strain ATCC 43049

Query: 2 PYLPRGDP 9
PYL GDP
Sbjct: 15 PYLAAGDP 22


>sp|TRPA_NATPD|TRYPTOPHAN synthase alpha chain|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PYLPRGDP 9
PYL GDP
Sbjct: 14 PYLAAGDP 21


>sp|RADA_SULAC|DNA repair and recombination protein|Sulfolobus acidocaldarius (strain

Query: 1 SPYLPRGDPV 10
+P+LP G+ V
Sbjct: 299 APHLPEGEVV 308


>sp|RADA_SACS2|DNA repair and recombination protein|Saccharolobus solfataricus (strain

Query: 1 SPYLPRGDPV 10
+P+LP G+ V
Sbjct: 302 APHLPEGEVV 311


>sp|RADA_SACI7|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 1 SPYLPRGDPV 10
+P+LP G+ V
Sbjct: 302 APHLPEGEVV 311


>sp|RADA_SACI6|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 1 SPYLPRGDPV 10
+P+LP G+ V
Sbjct: 302 APHLPEGEVV 311


>sp|RADA_SACI4|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 1 SPYLPRGDPV 10
+P+LP G+ V
Sbjct: 302 APHLPEGEVV 311


>sp|RADA_SACI3|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 1 SPYLPRGDPV 10
+P+LP G+ V
Sbjct: 302 APHLPEGEVV 311


>sp|RADA_SACI2|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 1 SPYLPRGDPV 10
+P+LP G+ V
Sbjct: 302 APHLPEGEVV 311


>sp|RADA_SACI1|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 1 SPYLPRGDPV 10
+P+LP G+ V
Sbjct: 302 APHLPEGEVV 311


>sp|RADA_METS5|DNA repair and recombination protein|Metallosphaera sedula (strain ATCC

Query: 1 SPYLPRGDPV 10
+P+LP G+ V
Sbjct: 302 APHLPEGEVV 311


>sp|RADA_DESAM|DNA repair and recombination protein|Desulfurococcus amylolyticus

Query: 1 SPYLPRGDPV 10
+P+LP G+ V
Sbjct: 305 APHLPEGEVV 314


>sp|RADA_DESA1|DNA repair and recombination protein|Desulfurococcus amylolyticus

Query: 1 SPYLPRGDPV 10
+P+LP G+ V
Sbjct: 305 APHLPEGEVV 314


>sp|RADA_SULTO|DNA repair and recombination protein|Sulfurisphaera tokodaii (strain

Query: 1 SPYLPRGDPV 10
+P+LP G+ V
Sbjct: 302 APHLPEGEVV 311


>sp|RADA_PYRHO|DNA repair and recombination protein|Pyrococcus horikoshii (strain ATCC

Query: 1 SPYLPRGDPV 10
+P+LP G+ V
Sbjct: 510 APHLPEGEAV 519


>sp|TRPA_HALVD|TRYPTOPHAN synthase alpha chain|Haloferax volcanii (strain ATCC 29605

Query: 2 PYLPRGDP 9
PYL GDP
Sbjct: 15 PYLAAGDP 22


>sp|RADA_PYRNV|DNA repair and recombination protein|Pyrobaculum neutrophilum (strain

Query: 1 SPYLPRGD 8
SPY P G+
Sbjct: 311 SPYHPEGE 318


>sp|RADA_PYRIL|DNA repair and recombination protein|Pyrobaculum islandicum (strain DSM

Query: 1 SPYLPRGD 8
SPY P G+
Sbjct: 311 SPYHPEGE 318


>sp|RADA_PYRCJ|DNA repair and recombination protein|Pyrobaculum calidifontis (strain

Query: 1 SPYLPRGD 8
SPY P G+
Sbjct: 313 SPYHPEGE 320


>sp|RADA_PYRAR|DNA repair and recombination protein|Pyrobaculum arsenaticum (strain

Query: 1 SPYLPRGD 8
SPY P G+
Sbjct: 314 SPYHPEGE 321


>sp|RADA_PYRAE|DNA repair and recombination protein|Pyrobaculum aerophilum (strain

Query: 1 SPYLPRGD 8
SPY P G+
Sbjct: 314 SPYHPEGE 321


>sp|APGM_METTP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanothrix thermoacetophila (strain DSM

Query: 1 SPYLPRGD 8
S +LPRGD
Sbjct: 167 SDHLPRGD 174


>sp|SYW1_HALSA|TRYPTOPHAN--TRNA ligase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 SPYLPRGDP 9
S ++P GDP
Sbjct: 82 SGFMPTGDP 90


>sp|RS9_PYRAE|SMALL ribosomal subunit protein uS9|Pyrobaculum aerophilum (strain ATCC

Query: 2 PYLPRGDP 9
PY+ +GDP
Sbjct: 113 PYMLKGDP 120


>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SPYLPRG 7
+PY PRG
Sbjct: 365 NPYHPRG 371


>sp|IDI2_AERPE|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Aeropyrum pernix (strain ATCC 700893

Query: 3 YLPRGDP 9
Y P GDP
Sbjct: 163 YQPEGDP 169


>sp|TSR3_METBF|16S rRNA aminocarboxypropyltransferase|Methanosarcina barkeri (strain

Query: 2 PYLPRGDPV 10
PYL G+PV
Sbjct: 97 PYLLAGNPV 105


>sp|SECY_PYRHO|PROTEIN translocase subunit SecY|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PYLPRGDPV 10
P+L R DPV
Sbjct: 312 PWLGRFDPV 320


>sp|LYSZ_AERPE|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Aeropyrum pernix

Query: 1 SPYLPRGDP 9
SPY GDP
Sbjct: 245 SPYAAIGDP 253


>sp|IF2G_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 2 PYLPRGD 8
PYL +GD
Sbjct: 299 PYLTKGD 305


>sp|GLNA1_METMA|GLUTAMINE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 YLPRGDP 9
YLP G+P
Sbjct: 101 YLPDGNP 107


>sp|IF2G_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PYLPRGD 8
PYL +GD
Sbjct: 300 PYLTKGD 306




91|Sequence|451|460|RGDPVLKPLI

>sp|ASSY_THEVO|ARGININOSUCCINATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 DPVLKPLI 10
DP +KPLI
Sbjct: 311 DPAMKPLI 318


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RGDPVLKPLI 10
RG+PVL L+
Sbjct: 280 RGNPVLSALM 289


>sp|MNTP_METMA|MANGANESE exporter MntP|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GDPVLKPLI 10
G P+L+P+I
Sbjct: 127 GTPILEPVI 135


>sp|MNTP_METAC|MANGANESE exporter MntP|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GDPVLKPLI 10
G P+L+P+I
Sbjct: 127 GTPILEPVI 135


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 1 RGDPVLKPL 9
+G PV++PL
Sbjct: 525 KGHPVIRPL 533


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 1 RGDPVLKPL 9
+G PV++PL
Sbjct: 525 KGHPVIRPL 533


>sp|THII_PYRAE|TRNA sulfurtransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PVLKPLI 10
P+L+PLI
Sbjct: 303 PILRPLI 309


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RGDPVLKPLI 10
RG+P+L L+
Sbjct: 282 RGNPILSSLM 291


>sp|RS7_PYRFU|SMALL ribosomal subunit protein uS7|Pyrococcus furiosus (strain ATCC

Query: 3 DPVLKPLI 10
DP LKP I
Sbjct: 30 DPSLKPYI 37


>sp|RS7_PYRAB|SMALL ribosomal subunit protein uS7|Pyrococcus abyssi (strain GE5 /

Query: 3 DPVLKPLI 10
DP LKP I
Sbjct: 30 DPSLKPYI 37


>sp|RS7_PYRHO|SMALL ribosomal subunit protein uS7|Pyrococcus horikoshii (strain ATCC

Query: 3 DPVLKPLI 10
DP LKP I
Sbjct: 33 DPSLKPYI 40


>sp|THII_THEAC|TRNA sulfurtransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GDPVLKPLI 10
G P+L+PLI
Sbjct: 300 GVPILRPLI 308


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GDPVLKP 8
G+PV KP
Sbjct: 50 GNPVFKP 56


>sp|RS7_THEKO|SMALL ribosomal subunit protein uS7|Thermococcus kodakarensis (strain

Query: 3 DPVLKPLI 10
DP LKP I
Sbjct: 30 DPSLKPYI 37


>sp|MPTN_METAC|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GDPVLKPL 9
GD V+KP+
Sbjct: 143 GDAVIKPV 150


>sp|RL18A_METJA|LARGE ribosomal subunit protein eL20|Methanocaldococcus jannaschii

Query: 3 DPVLKPLI 10
DPVLK L+
Sbjct: 67 DPVLKKLV 74


>sp|Y107_METJA|UNCHARACTERIZED protein MJ0107|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GDPVLKPL 9
DP+L+P+
Sbjct: 304 ADPILEPI 311


>sp|MPTN_METMA|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GDPVLKPL 9
GD V+KP+
Sbjct: 143 GDAVIKPV 150


>sp|AMPPA_THEKO|AMP phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GDPVLKP 8
GDP +KP
Sbjct: 399 GDPNIKP 405




92|Sequence|456|465|LKPLIYEMIL

>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 2 KPLIYEMIL 10
KP IY+MIL
Sbjct: 973 KPRIYDMIL 981


>sp|AATI_METMA|A-TYPE ATP synthase subunit I|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PLIYEMIL 10
PLIY MIL
Sbjct: 353 PLIYGMIL 360


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 LKPLIYEMI 9
LKPL YE++
Sbjct: 335 LKPLFYEVL 343


>sp|SYE_PYRAB|GLUTAMATE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 KPLIYEMIL 10
+P+ YEMI+
Sbjct: 149 EPIFYEMII 157


>sp|SYK_THEVO|LYSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PLIYEMIL 10
PL+YE I+
Sbjct: 254 PLVYERIM 261


>sp|Y325_METJA|UNCHARACTERIZED protein MJ0325|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LKPLIYEM 8
+ PLIYE+
Sbjct: 52 INPLIYEI 59




93|Sequence|461|470|YEMILHEFLE

>sp|AHBD_METBF|ADOMET-DEPENDENT heme synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YEMILHEFLE 10
YE ILH F E
Sbjct: 201 YERILHWFYE 210


>sp|RS3_THEKO|SMALL ribosomal subunit protein uS3|Thermococcus kodakarensis (strain

Query: 2 EMILHEFLE 10
EM++ EFLE
Sbjct: 14 EMLIDEFLE 22


>sp|AATE_PYRIL|A-TYPE ATP synthase subunit E|Pyrobaculum islandicum (strain DSM 4184

Query: 1 YEMILHEFLE 10
YE IL++F+E
Sbjct: 75 YEQILNDFIE 84


>sp|RS3_PYRHO|SMALL ribosomal subunit protein uS3|Pyrococcus horikoshii (strain ATCC

Query: 2 EMILHEFLE 10
EM++ EFLE
Sbjct: 14 EMLIDEFLE 22


>sp|RS3_PYRAB|SMALL ribosomal subunit protein uS3|Pyrococcus abyssi (strain GE5 /

Query: 2 EMILHEFLE 10
EM++ EFLE
Sbjct: 14 EMLIDEFLE 22


>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 YEMILHEFL 9
Y++I+H F+
Sbjct: 391 YDLIVHRFI 399


>sp|RS3_PYRFU|SMALL ribosomal subunit protein uS3|Pyrococcus furiosus (strain ATCC

Query: 2 EMILHEFLE 10
EM++ EFLE
Sbjct: 14 EMLIDEFLE 22


>sp|RS3_THEGJ|SMALL ribosomal subunit protein uS3|Thermococcus gammatolerans (strain

Query: 2 EMILHEFLE 10
EM++ E+LE
Sbjct: 14 EMLIDEYLE 22


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 YEMILHEFLE 10
Y +LHEF++
Sbjct: 252 YGALLHEFMD 261


>sp|F16PA_METB6|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Methanoregula boonei (strain DSM 21154

Query: 3 MILHEFLE 10
MIL EFL+
Sbjct: 1 MILREFLD 8




94|Sequence|466|475|HEFLESDYEG

>sp|Y932_METKA|UNCHARACTERIZED protein MK0932|Methanopyrus kandleri (strain AV19 /

Query: 3 FLESDYE 9
LESDYE
Sbjct: 35 LLESDYE 41


>sp|ENO_AERPE|ENOLASE pernix (strain ATCC 700893

Query: 3 FLESDYEG 10
F E DYEG
Sbjct: 291 FSEDDYEG 298


>sp|DHYS1_METAC|PROBABLE deoxyhypusine synthase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 HEFLESDYEG 10
HEF+E YE
Sbjct: 219 HEFMEICYEA 228


Query: 2 EFLESDYEG 10
EFL+S Y G
Sbjct: 143 EFLQSVYAG 151


>sp|GATD_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 2 EFLESDY 8
EFL SDY
Sbjct: 295 EFLRSDY 301


>sp|TIAS_IGNH4|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignicoccus hospitalis (strain

Query: 1 HEFLESDYEG 10
+EF++ ++EG
Sbjct: 236 YEFVQKEFEG 245


>sp|CPGS_METTH|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermobacter

Query: 2 EFLESDY 8
E+LES+Y
Sbjct: 366 EYLESEY 372


>sp|CCA_HALLT|CCA-ADDING enzyme|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 HEFLESDYEG 10
E+LESD G
Sbjct: 411 REYLESDAAG 420




95|Sequence|471|480|SDYEGFATLI

>sp|ENO_HALWD|ENOLASE walsbyi (strain DSM 16790

Query: 1 SDYEGFATL 9
+DY+GFATL
Sbjct: 281 NDYDGFATL 289


>sp|ENO_METAR|ENOLASE arvoryzae (strain DSM 22066

Query: 1 SDYEGFATL 9
+DYEGFA L
Sbjct: 275 NDYEGFARL 283


>sp|ENO3_METHJ|ENOLASE 3|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DYEGFATL 9
DYEGFA L
Sbjct: 280 DYEGFAAL 287


>sp|ENO_META3|ENOLASE aeolicus (strain ATCC BAA-1280

Query: 2 DYEGFATL 9
D+EGFA+L
Sbjct: 293 DFEGFASL 300


>sp|ENO_ARCFU|ENOLASE fulgidus (strain ATCC 49558

Query: 2 DYEGFATL 9
D+EGFA L
Sbjct: 275 DFEGFAEL 282


>sp|ENO_THEVO|ENOLASE volcanium (strain ATCC 51530

Query: 1 SDYEGFATL 9
+D+EGFA +
Sbjct: 280 TDFEGFAEI 288


>sp|ENO_HALLT|ENOLASE lacusprofundi (strain ATCC 49239

Query: 1 SDYEGFATL 9
+DYE FA L
Sbjct: 280 NDYEAFAEL 288


>sp|ENO_HALMA|ENOLASE marismortui (strain ATCC 43049

Query: 1 SDYEGFATL 9
+DYE FA L
Sbjct: 281 NDYEAFADL 289


>sp|FPOC_METMA|F(420)H(2) dehydrogenase subunit C|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DYEGF 6
DYEGF
Sbjct: 145 DYEGF 149


>sp|ENO_METJA|ENOLASE jannaschii (strain ATCC 43067

Query: 2 DYEGFATL 9
D+EGFA +
Sbjct: 292 DFEGFAMI 299


>sp|ENO_METLZ|ENOLASE labreanum (strain ATCC 43576

Query: 2 DYEGFATL 9
D+EGFA +
Sbjct: 280 DFEGFARI 287


>sp|ENO_AERPE|ENOLASE pernix (strain ATCC 700893

Query: 2 DYEGFATLI 10
DYEGF +
Sbjct: 295 DYEGFKAAV 303


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SDYEGFAT 8
SD+E FAT
Sbjct: 165 SDFEVFAT 172


>sp|TNAA_HALSA|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 700922

Query: 3 YEGFAT 8
YEGF+T
Sbjct: 282 YEGFST 287


>sp|TNAA_HALS3|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 29341

Query: 3 YEGFAT 8
YEGF+T
Sbjct: 282 YEGFST 287


>sp|ENO_METMP|ENOLASE maripaludis (strain DSM 14266

Query: 2 DYEGFAT 8
D+EGF T
Sbjct: 294 DFEGFKT 300


>sp|XACH_HALVD|XYLOSE/ARABINOSE import permease protein XacH|Haloferax volcanii (strain ATCC

Query: 1 SDYEGFAT 8
+DYEG T
Sbjct: 63 TDYEGLGT 70




96|Sequence|476|485|FATLIREWPG

>sp|HOSA_SULTO|HOMOCITRATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FATLIREWPG 10
F+TL+RE PG
Sbjct: 182 FSTLVREVPG 191


>sp|PUR2_METLZ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 ATLIREWPG 10
A IRE+PG
Sbjct: 133 AEFIREYPG 141


>sp|PGP_HALMA|PHOSPHOGLYCOLATE phosphatase|Haloarcula marismortui (strain ATCC 43049

Query: 4 LIREWPG 10
++REWP
Sbjct: 30 VLREWPA 36


>sp|PNCB_METAC|NICOTINATE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 FATLIREWPG 10
F T+ +EW G
Sbjct: 131 FTTIEKEWNG 140


>sp|PNCB_METMA|NICOTINATE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FATLIREWPG 10
F T+ +EW G
Sbjct: 131 FTTIEKEWNG 140


>sp|TRM56_HALWD|TRNA (cytidine(56)-2'-O)-methyltransferase|Haloquadratum walsbyi

Query: 5 IREWPG 10
IREW G
Sbjct: 76 IREWSG 81


>sp|TRM56_NATPD|TRNA (cytidine(56)-2'-O)-methyltransferase|Natronomonas pharaonis

Query: 4 LIREWPG 10
L+R+W G
Sbjct: 73 LVRDWAG 79


>sp|PUS10_AERPE|TRNA pseudouridine synthase Pus10|Aeropyrum pernix (strain ATCC 700893

Query: 2 ATLIREWPG 10
ATL+ E+PG
Sbjct: 181 ATLMVEFPG 189


>sp|Y678_METJA|UNCHARACTERIZED protein MJ0678|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 IREWPG 10
IREW G
Sbjct: 21 IREWDG 26


>sp|KTHY2_SULTO|PROBABLE thymidylate kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ATLIREW 8
ATL+++W
Sbjct: 21 ATLLKDW 27




97|Sequence|481|490|REWPGDLYNN

>sp|PUR2_METLZ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 REWPGDL 7
RE+PGDL
Sbjct: 137 REYPGDL 143


>sp|Y830_PYRAE|PROTEIN PAE0830|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 REWPGDL 7
REW GDL
Sbjct: 105 REWGGDL 111


>sp|CAPPA_PYRFU|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 REWPGDLY 8
REW GD +
Sbjct: 163 REWIGDFF 170


>sp|TRM56_METAC|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosarcina acetivorans

Query: 1 REWPGDLY 8
R W GD Y
Sbjct: 53 RRWGGDFY 60


>sp|COFD_METJA|2-PHOSPHO-L-LACTATE transferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WPGDLY 8
W GDLY
Sbjct: 41 WIGDLY 46


>sp|TRM56_METLZ|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanocorpusculum labreanum

Query: 4 PGDLY 8
PGDLY
Sbjct: 117 PGDLY 121


>sp|TRM56_METHJ|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanospirillum hungatei

Query: 4 PGDLY 8
PGDLY
Sbjct: 112 PGDLY 116


>sp|NADE_HYPBU|NH(3)-DEPENDENT NAD(+) synthetase|Hyperthermus butylicus (strain DSM 5456

Query: 1 REWPGDL 7
R WPG L
Sbjct: 196 RLWPGQL 202


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 EWPGDLYN 9
E+ GD+YN
Sbjct: 710 EYEGDVYN 717


Query: 4 PGDLY 8
PGDLY
Sbjct: 998 PGDLY 1002


>sp|SYDND_METBU|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 EWPGDL 7
EW GDL
Sbjct: 305 EWGGDL 310


>sp|DEGLY_THEKO|DEGLYCASE TK1284|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 PGDLY 8
PGDLY
Sbjct: 151 PGDLY 155


>sp|ULIL_METAC|ULILYSIN acetivorans (strain ATCC 35395

Query: 3 WPGDLYNN 10
WP D Y N
Sbjct: 165 WPADRYLN 172


>sp|DEGLY_PYRFU|DEGLYCASE PfpI|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PGDLY 8
PGDLY
Sbjct: 151 PGDLY 155


>sp|SURE_CALMQ|5'-NUCLEOTIDASE SurE|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 WPGDLYN 9
W G LYN
Sbjct: 56 WNGGLYN 62


>sp|SEPS_METLZ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 WPGDLYNN 10
W G+LY +
Sbjct: 396 WKGELYGH 403


>sp|HJC_HALVD|CROSSOVER junction endodeoxyribonuclease Hjc|Haloferax volcanii (strain ATCC

Query: 4 PGDLY 8
PGDLY
Sbjct: 100 PGDLY 104


>sp|TRM1_SULTO|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfurisphaera tokodaii

Query: 3 WPGDLYN 9
W G+L+N
Sbjct: 275 WTGELWN 281




98|Sequence|486|495|DLYNNSVIVQ

>sp|DP2S_THEAC|DNA polymerase II small subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 DLYNNSVIVQ 10
DLY+ SVIV+
Sbjct: 473 DLYSRSVIVK 482


>sp|RADA_METBF|DNA repair and recombination protein|Methanosarcina barkeri (strain

Query: 1 DLYNNSVIV 9
DL+N SV+V
Sbjct: 248 DLFNASVVV 256


>sp|AROA_PICTO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 DLYNNSVIVQ 10
D+YNN ++V
Sbjct: 269 DIYNNKIVVH 278


>sp|EHAA_METJA|PROBABLE [NiFe]-hydrogenase-type-3 Eha complex membrane|Methanocaldococcus

Query: 2 LYNNSVIVQ 10
+YNNS++V+
Sbjct: 2 VYNNSLLVR 10


>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 2 LYNNSVIV 9
LY NSV+V
Sbjct: 194 LYGNSVLV 201


>sp|NITR_PYRAB|NITRILASE abyssi (strain GE5 /

Query: 2 LYNNSVIV 9
LYN++V+V
Sbjct: 95 LYNSAVVV 102




99|Sequence|491|500|SVIVQAVRDH

>sp|TSR3_METTH|16S rRNA aminocarboxypropyltransferase|Methanothermobacter

Query: 1 SVIVQAVRDH 10
SVI Q R+H
Sbjct: 78 SVIFQTARNH 87


>sp|AATI_THEKO|A-TYPE ATP synthase subunit I|Thermococcus kodakarensis (strain ATCC

Query: 2 VIVQAVRDH 10
VIV RDH
Sbjct: 200 VIVNLARDH 208


>sp|METK_PYRNV|S-ADENOSYLMETHIONINE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 VIVQAVRD 9
+I+QA RD
Sbjct: 108 IIIQAARD 115




100|Sequence|496|505|AVRDHLKKDS

>sp|DAPAL_THEAC|UNCHARACTERIZED DapA-like lyase Ta1157|Thermoplasma acidophilum (strain ATCC

Query: 2 VRDHLKK 8
VRDH KK
Sbjct: 63 VRDHSKK 69


>sp|SYDND_METBU|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 AVRDHLKKD 9
AVRD L KD
Sbjct: 151 AVRDFLSKD 159


>sp|METK_METMI|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (Methanococcus deltae)

Query: 1 AVRDHLKK 8
A RD+LKK
Sbjct: 116 AARDYLKK 123


>sp|METK_METMP|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 AVRDHLKK 8
A RD+LKK
Sbjct: 116 AARDYLKK 123


>sp|GSA_METAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 AVRDHLKKD 9
AV D+LKK+
Sbjct: 313 AVLDYLKKE 321


>sp|RL31_METM5|LARGE ribosomal subunit protein eL31|Methanococcus maripaludis (strain

Query: 1 AVRDHLKK 8
A+RD LKK
Sbjct: 30 AIRDFLKK 37


>sp|METK_METM6|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 AVRDHLKK 8
A RD+LKK
Sbjct: 116 AARDYLKK 123


>sp|METK_METM5|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 AVRDHLKK 8
A RD+LKK
Sbjct: 116 AARDYLKK 123


>sp|METK_METM7|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 AVRDHLKK 8
A RD+LKK
Sbjct: 116 AARDYLKK 123




101|Sequence|501|510|LKKDSQNKTL

>sp|NDRZ_THEAC|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Thermoplasma

Query: 1 LKKDSQNKTL 10
L KDS+NK L
Sbjct: 343 LSKDSENKVL 352




102|Sequence|506|515|QNKTLLKTLA

>sp|DTDA_SULTO|D-AMINOACYL-TRNA deacylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QNKTLLKTL 9
+NK L+KTL
Sbjct: 130 ENKELVKTL 138




103|Sequence|511|520|LKTLAELYTY

>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 3 TLAELYTY 10
TLAEL+ Y
Sbjct: 39 TLAELFCY 46


>sp|Y1004_METJA|UNCHARACTERIZED protein MJ1004|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LKTLAELY 8
+KTLA+LY
Sbjct: 118 VKTLAKLY 125




104|Sequence|516|525|ELYTYDKNYG

>sp|ENO_METAR|ENOLASE arvoryzae (strain DSM 22066

Query: 1 ELYTYDKNYG 10
E+YT D NYG
Sbjct: 23 EVYTDDGNYG 32


>sp|SAT_THEON|SULFATE adenylyltransferase|Thermococcus onnurineus (strain NA1)

Query: 1 ELYTYDK 7
E+YTYDK
Sbjct: 113 EIYTYDK 119


>sp|SAT_IGNH4|SULFATE adenylyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 ELYTYDKNY 9
E++ +DKNY
Sbjct: 116 EIFPWDKNY 124


>sp|TRPC_SULAC|INDOLE-3-GLYCEROL phosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LYTYDKNYG 10
LY Y K+YG
Sbjct: 146 LYKYAKSYG 154


>sp|RS17_METKA|SMALL ribosomal subunit protein uS17|Methanopyrus kandleri (strain AV19

Query: 1 ELYTYDKNY 9
E Y YD+ Y
Sbjct: 58 EYYRYDRKY 66


>sp|TRPA_METJA|TRYPTOPHAN synthase alpha chain|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LYTYDKNYG 10
LY Y K YG
Sbjct: 139 LYNYCKKYG 147


>sp|RL3_AERPE|LARGE ribosomal subunit protein uL3|Aeropyrum pernix (strain ATCC

Query: 2 LYTYDKNYG 10
LY YD N G
Sbjct: 90 LYGYDPNRG 98


>sp|SAT_NITMS|SULFATE adenylyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 ELYTYDK 7
E+YT+DK
Sbjct: 113 EVYTFDK 119


>sp|Y1401_SACS2|PUTATIVE CRISPR-associated protein SSO1401|Saccharolobus solfataricus

Query: 1 ELYTYDKNYG 10
+L TY KNY
Sbjct: 62 KLKTYKKNYA 71


>sp|Y118_ARCFU|UNCHARACTERIZED protein AF_0118|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ELYTYD 6
ELYTYD
Sbjct: 5 ELYTYD 10


>sp|HEM1_METBF|GLUTAMYL-TRNA reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ELYTYDKNYG 10
ELY Y K G
Sbjct: 113 ELYAYSKKAG 122


>sp|AMPD_METJA|ANHYDROMEVALONATE phosphate decarboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 5 YDKNYG 10
YDK+YG
Sbjct: 124 YDKDYG 129


>sp|APGM_METVS|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ELYTYDKNYG 10
E+ +DK YG
Sbjct: 228 EIIPFDKKYG 237


>sp|NDK_HALWD|NUCLEOSIDE diphosphate kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ELYTYDK 7
ELYTY++
Sbjct: 144 ELYTYER 150


>sp|SEPS_METVS|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ELYTYDKN 8
E+Y YD N
Sbjct: 427 EIYVYDGN 434


>sp|Y504_ARCFU|UPF0282 protein AF_0504|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ELYTYDKN 8
ELY DKN
Sbjct: 280 ELYKMDKN 287


>sp|SEPS_METM5|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C5 /

Query: 1 ELYTYDKN 8
E+Y YD N
Sbjct: 427 EIYVYDGN 434


>sp|SEPS_METM7|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C7 /

Query: 1 ELYTYDKN 8
E+Y YD N
Sbjct: 427 EIYVYDGN 434


>sp|SEPS_METMP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ELYTYDKN 8
E+Y YD N
Sbjct: 427 EIYVYDGN 434


>sp|FAU1_PYRFU|PROBABLE ribonuclease FAU-1|Pyrococcus furiosus (strain ATCC 43587

Query: 5 YDKNYG 10
YDKN+G
Sbjct: 55 YDKNHG 60


>sp|THII_ARCFU|PROBABLE tRNA sulfurtransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ELYTYDKNY 9
E Y Y K Y
Sbjct: 146 EAYVYSKRY 154


>sp|ATGT_METVS|TRNA-GUANINE(15) transglycosylase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ELYTYDKNYG 10
+LY ++KNY
Sbjct: 450 DLYDFEKNYN 459


>sp|Y1562_ARCFU|UNCHARACTERIZED protein AF_1562|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ELYTYDKNY 9
EL+T+D +Y
Sbjct: 55 ELWTHDTHY 63


>sp|Y096_METJA|UNCHARACTERIZED protein MJ0096|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LYTYDKNYG 10
+Y+Y K YG
Sbjct: 229 IYSYAKAYG 237


>sp|SEPS_METM6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C6 /

Query: 1 ELYTYDKN 8
E+Y YD N
Sbjct: 427 EIYMYDGN 434




105|Sequence|521|530|DKNYGNALEI

>sp|Y1614_METJA|UNCHARACTERIZED protein MJ1614|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DKNYGNALEI 10
DKN +ALEI
Sbjct: 14 DKNLSDALEI 23


>sp|ARFB_METVS|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus vannielii (strain ATCC

Query: 1 DKNYGNAL 8
DKNYG L
Sbjct: 201 DKNYGKTL 208


>sp|DNLI_NANEQ|DNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 DKNYGNALEI 10
DK+ GN LE+
Sbjct: 456 DKDTGNYLEV 465


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 NYGNALEI 10
N GNALE+
Sbjct: 197 NAGNALEV 204


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 NYGNALEI 10
N GNALE+
Sbjct: 197 NAGNALEV 204


>sp|Y797_METJA|UNCHARACTERIZED ABC transporter permease MJ0797|Methanocaldococcus jannaschii

Query: 1 DKNYGNALEI 10
D N GN LEI
Sbjct: 140 DVNVGNQLEI 149


>sp|SERA_METJA|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DKNYGNALEI 10
++ YGNA++I
Sbjct: 405 EEKYGNAIKI 414


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KNYGNALEI 10
K YGN +E+
Sbjct: 714 KKYGNEIEV 722


>sp|SPSS_METTP|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DKNYGNALE 9
D NYGN ++
Sbjct: 169 DGNYGNLVD 177


>sp|AKSF_METJA|HOMOISOCITRATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KNYGNAL 8
K YGNAL
Sbjct: 43 KKYGNAL 49


>sp|NIFK_METTH|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter

Query: 2 KNYGNALE 9
+ YGNAL+
Sbjct: 150 RGYGNALK 157


>sp|CAPPA_THEPD|PHOSPHOENOLPYRUVATE carboxylase|Thermofilum pendens (strain DSM 2475

Query: 2 KNYGNALEI 10
+ YG ALE+
Sbjct: 336 REYGRALEL 344


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 NYGNALEI 10
N GNALE+
Sbjct: 194 NAGNALEV 201


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 1 DKNYGNA 7
+KNY NA
Sbjct: 413 EKNYANA 419




106|Sequence|526|535|NALEIYLTLR

>sp|RPO2N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanocaldococcus jannaschii (strain

Query: 1 NALEIYLTLR 10
NALE+Y R
Sbjct: 322 NALELYFGYR 331




107|Sequence|531|540|YLTLRHKDVF

>sp|PELO_META3|PROTEIN pelota homolog|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 YLTLRHKDVF 10
YL+ +HKD+
Sbjct: 210 YLSEKHKDML 219


>sp|GVPD1_HALSA|PROTEIN GvpD1|Halobacterium salinarum (strain ATCC 700922

Query: 1 YLTLRHKD 8
YL +RH D
Sbjct: 143 YLAVRHDD 150




108|Sequence|536|545|HKDVFQLIHK

>sp|Y3235_METAC|UPF0237 protein MA_3235|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HKDVFQLIHK 10
H+DVF+ +H+
Sbjct: 82 HEDVFRFMHR 91


>sp|LIPA_HALLT|LIPOYL synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 HKDVFQLIH 9
H DVF+ +H
Sbjct: 244 HLDVFEYVH 252


>sp|MTD_METST|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosphaera

Query: 4 VFQLIHK 10
VF+LIHK
Sbjct: 148 VFRLIHK 154


>sp|Y082_METMA|UPF0237 protein MM_0082|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HKDVFQLIHK 10
H+D F+ +H+
Sbjct: 82 HEDAFRFMHR 91


>sp|GATE_THESM|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus sibiricus (strain DSM 12597

Query: 2 KDVFQLIHK 10
KD F+L+H+
Sbjct: 525 KDAFKLLHE 533


>sp|Y1213_METKA|UPF0237 protein MK1213|Methanopyrus kandleri (strain AV19 /

Query: 1 HKDVFQLIHK 10
H+DV++ +H+
Sbjct: 80 HEDVYRAMHR 89


>sp|SYH_METMA|HISTIDINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DVFQLIH 9
D+F+LIH
Sbjct: 207 DLFRLIH 213


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HKDVFQLIHK 10
HK + +L+H+
Sbjct: 418 HKKLLELMHR 427


>sp|Y1558_METJA|UPF0237 protein MJ1558|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HKDVFQLIHK 10
H+D+F+ +H+
Sbjct: 80 HEDIFKYMHR 89


>sp|RS7_METHJ|SMALL ribosomal subunit protein uS7|Methanospirillum hungatei JF-1

Query: 2 KDVFQLIHK 10
+D F+++H+
Sbjct: 84 RDAFEIVHQ 92


>sp|GATE_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanobrevibacter smithii (strain ATCC

Query: 2 KDVFQLI 8
KD+FQL+
Sbjct: 518 KDIFQLL 524


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 1 HKDVFQLIH 9
+K++F LIH
Sbjct: 263 NKEIFSLIH 271




109|Sequence|541|550|QLIHKHNLFS

>sp|MPTA_METTP|GTP cyclohydrolase MptA|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 IHKHNLFS 10
IH+HN F+
Sbjct: 288 IHRHNAFA 295


>sp|MPTA_METTH|GTP cyclohydrolase MptA|Methanothermobacter thermautotrophicus (strain

Query: 3 IHKHNLFS 10
IH+HN F+
Sbjct: 290 IHRHNAFA 297


>sp|MPTA_METS3|GTP cyclohydrolase MptA|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 IHKHNLFS 10
IH+HN F+
Sbjct: 289 IHRHNAFA 296


>sp|MPTA_METMA|GTP cyclohydrolase MptA|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 IHKHNLFS 10
IH+HN F+
Sbjct: 296 IHRHNAFA 303


>sp|MPTA_METBU|GTP cyclohydrolase MptA|Methanococcoides burtonii (strain DSM 6242

Query: 3 IHKHNLFS 10
IH+HN F+
Sbjct: 294 IHRHNAFA 301


>sp|MPTA_METAC|GTP cyclohydrolase MptA|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 IHKHNLFS 10
IH+HN F+
Sbjct: 296 IHRHNAFA 303


>sp|MPTA1_METAR|GTP cyclohydrolase MptA 1|Methanocella arvoryzae (strain DSM 22066

Query: 3 IHKHNLFS 10
IH+HN F+
Sbjct: 288 IHRHNAFA 295


>sp|MPTA2_METAR|GTP cyclohydrolase MptA 2|Methanocella arvoryzae (strain DSM 22066

Query: 3 IHKHNLFS 10
IH+HN F+
Sbjct: 287 IHQHNAFA 294


>sp|ATGT_METBF|TRNA-GUANINE(15) transglycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QLIHKHNLFS 10
+L+ KHNL++
Sbjct: 297 ELLGKHNLYA 306


>sp|ATGT_METAC|TRNA-GUANINE(15) transglycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QLIHKHNLFS 10
+L+ KHNL++
Sbjct: 297 ELLGKHNLYA 306


>sp|G3P_METFO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium formicicum

Query: 2 LIHKHNL 8
L+H+HNL
Sbjct: 219 LMHQHNL 225


>sp|G3P_METBR|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium bryantii

Query: 2 LIHKHNL 8
L+H+HNL
Sbjct: 219 LMHQHNL 225


>sp|AATC_METBF|A-TYPE ATP synthase subunit C|Methanosarcina barkeri (strain Fusaro /

Query: 2 LIHKHN 7
+IHKHN
Sbjct: 327 IIHKHN 332


>sp|Y1155_METJA|UPF0313 protein MJ1155|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QLIHKHNLFS 10
+ IHK+N +S
Sbjct: 499 EFIHKNNCYS 508


>sp|ATGT_KORCO|TRNA-GUANINE(15) transglycosylase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 QLIHKHNLF 9
+L+ KHNL+
Sbjct: 301 KLLAKHNLY 309


>sp|ATGT_PYRAE|TRNA-GUANINE(15) transglycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 QLIHKHNL 8
QLI +HNL
Sbjct: 295 QLIAEHNL 302


>sp|MPTA_METBF|GTP cyclohydrolase MptA|Methanosarcina barkeri (strain Fusaro /

Query: 3 IHKHNLFS 10
IH+HN ++
Sbjct: 296 IHRHNAYA 303


>sp|DADD_METBF|5'-DEOXYADENOSINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LIHKHNLFS 10
L+HK N FS
Sbjct: 318 LLHKVNTFS 326


>sp|G3P_METTH|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 LIHKHNL 8
L+H+HN+
Sbjct: 218 LMHQHNI 224


>sp|G3P_METS3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LIHKHNL 8
L+H+HN+
Sbjct: 219 LMHQHNI 225


>sp|F16PA_METB6|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Methanoregula boonei (strain DSM 21154

Query: 1 QLIHKHNLFS 10
Q++HK +FS
Sbjct: 220 QILHKGGVFS 229


>sp|MPTA_METST|GTP cyclohydrolase MptA|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 IHKHNLFS 10
IH+HN ++
Sbjct: 291 IHQHNAYA 298


>sp|MPTA_METMJ|GTP cyclohydrolase MptA|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 IHKHNLFS 10
IH+HN ++
Sbjct: 288 IHQHNAYA 295


>sp|FUCA_METJA|L-FUCULOSE phosphate aldolase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LIHKHNLFS 10
+IH H+L S
Sbjct: 85 IIHTHSLIS 93


>sp|FUCA_META3|L-FUCULOSE phosphate aldolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LIHKHNLFS 10
++H H+L+S
Sbjct: 86 IVHTHSLYS 94




110|Sequence|546|555|HNLFSSIKDK

>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HNLFSSIKDK 10
H++F+ I DK
Sbjct: 478 HDIFAEISDK 487


>sp|Y1615_METJA|CHEF taxis protein family member|Methanocaldococcus jannaschii (strain

Query: 1 HNLFSSIKD 9
+++FS+IKD
Sbjct: 181 YDIFSNIKD 189


>sp|PYRH_METJA|URIDYLATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NLFSSIKDK 10
N+F IKD+
Sbjct: 28 NIFKKIKDE 36


>sp|GLPK_SACI7|GLYCEROL kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 NLFSSIKDK 10
N F IKDK
Sbjct: 119 NYFKMIKDK 127


>sp|GLPK_SACI6|GLYCEROL kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 NLFSSIKDK 10
N F IKDK
Sbjct: 119 NYFKMIKDK 127


>sp|GLPK_SACI4|GLYCEROL kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 NLFSSIKDK 10
N F IKDK
Sbjct: 119 NYFKMIKDK 127


>sp|GLPK_SACI3|GLYCEROL kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 NLFSSIKDK 10
N F IKDK
Sbjct: 119 NYFKMIKDK 127


>sp|GLPK_SACI2|GLYCEROL kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 NLFSSIKDK 10
N F IKDK
Sbjct: 119 NYFKMIKDK 127


>sp|GLPK1_SACS2|GLYCEROL kinase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 NLFSSIKDK 10
N F IKDK
Sbjct: 119 NYFKMIKDK 127


>sp|GLPK2_SACS2|GLYCEROL kinase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 NLFSSIKDK 10
N F IKDK
Sbjct: 118 NYFGMIKDK 126


>sp|Y1542_METJA|UNCHARACTERIZED protein MJ1542|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HNLFSSIKD 9
+NL+ IKD
Sbjct: 653 YNLYEEIKD 661




111|Sequence|551|560|SIKDKIVLLM

>sp|SYTC_SULAC|THREONINE--TRNA ligase catalytic subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 SIKDKIVLLM 10
IKD+I LLM
Sbjct: 293 QIKDEIKLLM 302




112|Sequence|556|565|IVLLMDFDSE

>sp|EF2_CENSY|ELONGATION factor 2|Cenarchaeum symbiosum (strain A)

Query: 3 LLMDFDSE 10
L MDFD E
Sbjct: 56 LAMDFDKE 63


>sp|DPO4_METS5|DNA polymerase IV|Metallosphaera sedula (strain ATCC 51363

Query: 1 IVLLMDFD 8
IVL +DFD
Sbjct: 2 IVLFVDFD 9


>sp|DPO4_SACS2|DNA polymerase IV|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IVLLMDFD 8
IVL +DFD
Sbjct: 2 IVLFVDFD 9


>sp|Y1624_METJA|UPF0292 protein MJ1624|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IVLLMDFDS 9
++LL DFD
Sbjct: 69 VILLTDFDR 77


>sp|DPO4_SULTO|DNA polymerase IV|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IVLLMDFD 8
I+L +DFD
Sbjct: 2 IILFVDFD 9




113|Sequence|561|570|DFDSEKAVDM

>sp|TRUB_SULTO|PROBABLE tRNA pseudouridine synthase B|Sulfurisphaera tokodaii (strain DSM

Query: 1 DFDSEKAVDM 10
D DS+K VDM
Sbjct: 302 DVDSQKLVDM 311


>sp|PUR2_METTH|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 FDSEKAVDM 10
F SEK VDM
Sbjct: 56 FASEKGVDM 64


>sp|Y451_ARCFU|UNCHARACTERIZED protein AF_0451|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FDSEKAVDM 10
FDSE AVD+
Sbjct: 62 FDSEMAVDV 70


>sp|CARA_METMA|CARBAMOYL phosphate synthase small chain|Methanosarcina mazei (strain ATCC

Query: 3 DSEKAVDM 10
D E+AVDM
Sbjct: 136 DGEEAVDM 143


>sp|ILVE_ARCFU|PUTATIVE branched-chain-amino-acid aminotransferase|Archaeoglobus fulgidus

Query: 2 FDSEKAVDM 10
+DS KA+D+
Sbjct: 53 YDSAKAIDL 61


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DFDSEKAVD 9
DF+++KAVD
Sbjct: 713 DFENDKAVD 721


>sp|ARGJ_METKA|GLUTAMATE N-acetyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 DFDSEKA 7
DFD EKA
Sbjct: 339 DFDEEKA 345


>sp|Y3518_METJA|UNCHARACTERIZED protein MJECL18|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DFDSEKAVDM 10
D DSEKAV++
Sbjct: 21 DKDSEKAVEV 30


>sp|PRIL_METAC|DNA primase large subunit PriL|Methanosarcina acetivorans (strain ATCC

Query: 1 DFDSEKAV 8
DFD+EK +
Sbjct: 275 DFDAEKTL 282




114|Sequence|566|575|KAVDMLLDNE

>sp|DNAG_NANEQ|DNA primase DnaG|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 AVDMLLDNE 10
A+D +LDNE
Sbjct: 331 AIDKILDNE 339


>sp|G1PDH_PYRHO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 AVDMLLD 8
A+DMLLD
Sbjct: 252 ALDMLLD 258


>sp|G1PDH_THEKO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus kodakarensis (strain ATCC

Query: 2 AVDMLLD 8
A+DMLLD
Sbjct: 257 ALDMLLD 263


>sp|SECD_METKA|PROTEIN-EXPORT membrane protein SecD|Methanopyrus kandleri (strain AV19 /

Query: 1 KAVDMLLDNE 10
+ +DM LDN+
Sbjct: 164 QPIDMYLDNK 173


>sp|HYPF_METJA|PROBABLE carbamoyltransferase HypF|Methanocaldococcus jannaschii (strain

Query: 1 KAVDMLLDNE 10
K+ +MLL+NE
Sbjct: 670 KSYEMLLNNE 679


>sp|RRP4_METBU|EXOSOME complex component Rrp4|Methanococcoides burtonii (strain DSM 6242

Query: 1 KAVDMLLDNE 10
+ VD+LLDN+
Sbjct: 249 RKVDVLLDND 258


>sp|SPEH_THEON|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus onnurineus (strain NA1)

Query: 1 KAVDMLLD 8
KAVD +LD
Sbjct: 91 KAVDYILD 98


>sp|RF1_PYRFU|PEPTIDE chain release factor subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KAVDMLLDNE 10
KA D+L D+E
Sbjct: 268 KAADILRDHE 277




115|Sequence|571|580|LLDNEDKISI

>sp|GATE_DESA1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Desulfurococcus amylolyticus (strain DSM

Query: 1 LLDNEDKISI 10
++DNE+KI I
Sbjct: 145 IMDNEEKIGI 154


>sp|ECFA_METMP|ENERGY-COUPLING factor transporter ATP-binding protein|Methanococcus maripaludis

Query: 1 LLDNEDKISI 10
LLD EDK+ I
Sbjct: 249 LLDKEDKLGI 258


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC 51178

Query: 1 LLDNEDKISI 10
LLDN D+ +I
Sbjct: 1049 LLDNSDRTTI 1058


>sp|LONB_ARCFU|ARCHAEAL Lon protease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLDNEDKIS 9
L+DN DK++
Sbjct: 171 LVDNSDKVT 179


>sp|IMDH_METJA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLDNEDKI 8
++DNEDK+
Sbjct: 126 VVDNEDKL 133


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 LLDNEDK 7
LLDN DK
Sbjct: 1048 LLDNSDK 1054


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 1 LLDNEDKISI 10
LLDN D+ I
Sbjct: 1049 LLDNSDRTMI 1058


>sp|DPOL_DESST|DNA polymerase|Desulfurococcus sp. (strain Tok)

Query: 1 LLDNEDKIS 9
++D EDKI+
Sbjct: 596 VIDEEDKIT 604


>sp|DPOL_THEGO|DNA polymerase|Thermococcus gorgonarius

Query: 1 LLDNEDKIS 9
++D EDKI+
Sbjct: 596 VIDEEDKIT 604




116|Sequence|576|585|DKISIKKVVE

>sp|CEDB_SULAC|DNA import protein CedB|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DKISIKKVV 9
DK+S+KK+V
Sbjct: 224 DKLSLKKIV 232


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 DKISIKKVV 9
D+IS++K+V
Sbjct: 310 DEISLRKIV 318




117|Sequence|581|590|KKVVEELEDR

>sp|LYSJ_PYRFU|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 KVVEELEDR 10
KVVEEL++R
Sbjct: 314 KVVEELQNR 322


>sp|CPGS_PYRHO|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus horikoshii (strain

Query: 1 KKVVEELEDR 10
K+V +ELEDR
Sbjct: 338 KRVTKELEDR 347


>sp|RS3_HALWD|SMALL ribosomal subunit protein uS3|Haloquadratum walsbyi (strain DSM

Query: 1 KKVVEELEDR 10
+KV ELEDR
Sbjct: 63 RKVTRELEDR 72


>sp|Y954_METJA|UNCHARACTERIZED protein MJ0954|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KVVEELEDR 10
K+V+ELED+
Sbjct: 360 KIVKELEDK 368


>sp|Y951_METJA|UNCHARACTERIZED protein MJ0951|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KKVVEELEDR 10
KK+VEE+++R
Sbjct: 37 KKIVEEIKER 46


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 KKVVEELEDR 10
KK++E +EDR
Sbjct: 958 KKIMETVEDR 967


>sp|RF1_HALSA|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 1 KKVVEELED 9
+KV+EEL+D
Sbjct: 18 RKVIEELKD 26


>sp|RF1_HALS3|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 1 KKVVEELED 9
+KV+EEL+D
Sbjct: 18 RKVIEELKD 26


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 1 KKVVEELEDR 10
KK++E +EDR
Sbjct: 958 KKMMETIEDR 967


>sp|MTBB3_METMA|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KVVEELE 8
K++EELE
Sbjct: 21 KIIEELE 27


>sp|METK_METKA|S-ADENOSYLMETHIONINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 KVVEELEDR 10
VVEEL DR
Sbjct: 229 SVVEELRDR 237


>sp|GUAAB_METBF|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina barkeri

Query: 1 KKVVEELED 9
KK+VE +ED
Sbjct: 154 KKIVEPIED 162


>sp|GUAAB_METMA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina mazei

Query: 1 KKVVEELED 9
KK+VE +ED
Sbjct: 154 KKIVEPIED 162


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 KVVEELEDR 10
KV+E +EDR
Sbjct: 1514 KVIERVEDR 1522


>sp|RF1_HALLT|PEPTIDE chain release factor subunit|Halorubrum lacusprofundi (strain

Query: 1 KKVVEELED 9
+KV+EEL D
Sbjct: 18 RKVIEELRD 26


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 KKVVEELEDR 10
KKV+EEL+ +
Sbjct: 777 KKVIEELQKK 786


>sp|RL4_SACI7|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 1 KKVVEELEDR 10
KK+VEE+ D+
Sbjct: 105 KKLVEEVNDK 114


>sp|RL4_SACI1|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 1 KKVVEELEDR 10
KK+VEE+ D+
Sbjct: 105 KKLVEEVNDK 114


>sp|NOB1_PYRHO|ENDORIBONUCLEASE Nob1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VVEELEDR 10
VVEE++DR
Sbjct: 30 VVEEIKDR 37


>sp|RL4_SACI6|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 1 KKVVEELEDR 10
KK+VEE+ D+
Sbjct: 105 KKLVEEVNDK 114


>sp|RL4_SACI4|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 1 KKVVEELEDR 10
KK+VEE+ D+
Sbjct: 105 KKLVEEVNDK 114


>sp|RL4_SACI3|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 1 KKVVEELEDR 10
KK+VEE+ D+
Sbjct: 105 KKLVEEVNDK 114


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 1 KKVVEELEDR 10
KK++E +EDR
Sbjct: 958 KKLMETVEDR 967


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 2 KVVEELEDR 10
K++ EL+DR
Sbjct: 590 KIINELKDR 598


>sp|Y3521_METJA|UNCHARACTERIZED protein MJECL21|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KKVVEEL 7
KKV+EEL
Sbjct: 271 KKVIEEL 277


>sp|TOP6B_PYRFU|TYPE 2 DNA topoisomerase 6|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KKVVEELE 8
KKVVEE+E
Sbjct: 319 KKVVEEVE 326


>sp|BE_THEKO|1,4-ALPHA-GLUCAN branching enzyme TK1436|Thermococcus kodakarensis (strain ATCC

Query: 2 KVVEELEDR 10
K++EELE+R
Sbjct: 511 KLLEELEER 519


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 KVVEELEDR 10
KVVE LE+R
Sbjct: 418 KVVEWLEER 426


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 KKVVEELEDR 10
KK+++ +EDR
Sbjct: 958 KKIMQTVEDR 967




118|Sequence|586|595|ELEDRPELQH

>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 1 ELEDRPELQ 9
ELEDRP +Q
Sbjct: 218 ELEDRPAVQ 226


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 1 ELEDRPELQ 9
ELEDRP +Q
Sbjct: 218 ELEDRPAVQ 226


>sp|PURL_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ELEDRPELQ 9
E+EDRP +Q
Sbjct: 218 EVEDRPAVQ 226


>sp|Y781_METJA|UNCHARACTERIZED protein MJ0781|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LEDRPELQ 9
+ED PELQ
Sbjct: 334 IEDTPELQ 341


>sp|F16PA_NATPD|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LEDRPE 7
LEDRPE
Sbjct: 218 LEDRPE 223


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LEDRPELQH 10
LED PEL++
Sbjct: 218 LEDNPELEN 226


>sp|SYY_METHJ|TYROSINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 ELEDRPELQ 9
E+ED P LQ
Sbjct: 238 EVEDNPVLQ 246




119|Sequence|591|600|PELQHVYLHK

>sp|NADA_METTH|QUINOLINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PELQHVYLHK 10
PE H Y+HK
Sbjct: 168 PEEGHCYVHK 177


>sp|METK_METB6|S-ADENOSYLMETHIONINE synthase|Methanoregula boonei (strain DSM 21154

Query: 2 ELQHVYLHK 10
E H YLHK
Sbjct: 110 EAAHEYLHK 118


>sp|Y856_METTH|METALLOPROTEASE MTH_856|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PELQHVYLHK 10
PEL V++H+
Sbjct: 232 PELTGVFIHE 241


>sp|Y996_METJA|METALLOPROTEASE MJ0996|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PELQHVYLHK 10
PEL V++H+
Sbjct: 231 PELAGVFIHE 240


>sp|NADA_THEON|QUINOLINATE synthase|Thermococcus onnurineus (strain NA1)

Query: 1 PELQHVYLHK 10
PE H Y+H+
Sbjct: 168 PEYGHCYVHR 177


>sp|PURA_THEON|ADENYLOSUCCINATE synthetase|Thermococcus onnurineus (strain NA1)

Query: 1 PELQHV 6
PEL+HV
Sbjct: 327 PELEHV 332


>sp|PURA_THEKO|ADENYLOSUCCINATE synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PELQHV 6
PEL+HV
Sbjct: 327 PELEHV 332


>sp|HIS1_METBF|ATP phosphoribosyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PELQHVYLHK 10
PE+ H Y K
Sbjct: 120 PEITHQYFKK 129


>sp|METK_METBF|S-ADENOSYLMETHIONINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PELQHVYL 8
PE+Q VY+
Sbjct: 330 PEVQDVYI 337


>sp|METK_METAC|S-ADENOSYLMETHIONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PELQHVYL 8
PE+Q VY+
Sbjct: 330 PEVQDVYI 337


>sp|MBHLA_PYRFU|MEMBRANE-BOUND hydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PELQHVYLH 9
P+++ V+LH
Sbjct: 184 PQIEDVFLH 192


>sp|UVRC_METBU|UVRABC system protein C|Methanococcoides burtonii (strain DSM 6242

Query: 1 PELQHVYLHK 10
PEL VYL K
Sbjct: 9 PELPGVYLMK 18




120|Sequence|596|605|VYLHKLFKRD

>sp|COBQ_HALMA|PROBABLE cobyric acid synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 YLHKLFKRD 10
YLH LF D
Sbjct: 433 YLHDLFSND 441


>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YLHKLFK 8
YL+KLFK
Sbjct: 385 YLYKLFK 391


>sp|DNAJ_METTE|CHAPERONE protein DnaJ|Methanosarcina thermophila

Query: 4 HKLFKR 9
HK+FKR
Sbjct: 256 HKIFKR 261


>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VYLHKLFKRD 10
VY++K+ K+D
Sbjct: 131 VYVNKILKKD 140


>sp|TRM1_NATPD|TRNA (guanine(26)-N(2))-dimethyltransferase|Natronomonas pharaonis

Query: 4 HKLFKR 9
HKL+KR
Sbjct: 315 HKLYKR 320


>sp|CDVB2_SULAC|CELL division protein B2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VYLHKLFKRD 10
VY+ KL +RD
Sbjct: 53 VYISKLQERD 62


>sp|RL30_KORCO|LARGE ribosomal subunit protein uL30|Korarchaeum cryptofilum (strain

Query: 1 VYLHKL 6
VYLHKL
Sbjct: 112 VYLHKL 117


>sp|PELO_SACI3|PROTEIN pelota homolog|Saccharolobus islandicus (strain M.16.27)

Query: 3 LHKLFKRD 10
LH++ KRD
Sbjct: 227 LHEILKRD 234


>sp|PELO_SACI7|PROTEIN pelota homolog|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 LHKLFKRD 10
LH++ KRD
Sbjct: 227 LHEILKRD 234


>sp|PELO_SACI6|PROTEIN pelota homolog|Saccharolobus islandicus (strain M.16.4 /

Query: 3 LHKLFKRD 10
LH++ KRD
Sbjct: 227 LHEILKRD 234


>sp|PELO_SACI4|PROTEIN pelota homolog|Saccharolobus islandicus (strain M.14.25 /

Query: 3 LHKLFKRD 10
LH++ KRD
Sbjct: 227 LHEILKRD 234


>sp|PELO_SACI2|PROTEIN pelota homolog|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 LHKLFKRD 10
LH++ KRD
Sbjct: 227 LHEILKRD 234


>sp|PELO_SACI1|PROTEIN pelota homolog|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 LHKLFKRD 10
LH++ KRD
Sbjct: 227 LHEILKRD 234




121|Sequence|601|610|LFKRDHHKGQ

>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 1 LFKRDHHKGQ 10
LF HHKG
Sbjct: 55 LFSEFHHKGH 64


>sp|NADM_METB6|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanoregula boonei (strain DSM 21154

Query: 1 LFKRDHHKG 9
+++RD H G
Sbjct: 119 MYERDRHSG 127


>sp|RL23_METS3|LARGE ribosomal subunit protein uL23|Methanobrevibacter smithii (strain

Query: 3 KRDHHKGQ 10
KRD +KGQ
Sbjct: 31 KRDANKGQ 38


>sp|FAU1_THEGJ|PROBABLE ribonuclease FAU-1|Thermococcus gammatolerans (strain DSM 15229

Query: 3 KRDHH 7
KRDHH
Sbjct: 57 KRDHH 61


>sp|RS3A_METM7|SMALL ribosomal subunit protein eS1|Methanococcus maripaludis (strain C7

Query: 4 RDHHKGQ 10
RDHHK +
Sbjct: 136 RDHHKTE 142


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LFKRDHHKG 9
L+K+++H G
Sbjct: 385 LYKKEYHTG 393




122|Sequence|606|615|HHKGQRYHEK

>sp|THSB_ARCFU|THERMOSOME subunit beta|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HHKGQRY 7
H KGQ+Y
Sbjct: 470 HEKGQKY 476


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 1 HHKGQRYHEK 10
H K + Y+EK
Sbjct: 1342 HEKAKEYYEK 1351


>sp|SYFB_METVS|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus vannielii (strain ATCC 35089

Query: 1 HHKGQRY 7
H KGQ+Y
Sbjct: 187 HEKGQKY 193


>sp|KAE1_ARCFU|TRNA N6-adenosine threonylcarbamoyltransferase|Archaeoglobus fulgidus

Query: 3 KGQRYH 8
KGQ+YH
Sbjct: 180 KGQKYH 185


>sp|ENO_THEON|ENOLASE onnurineus (strain NA1)

Query: 4 GQRYHEK 10
G+RYH K
Sbjct: 57 GKRYHGK 63


>sp|ENO_PYRHO|ENOLASE horikoshii (strain ATCC 700860

Query: 4 GQRYHEK 10
G+RYH K
Sbjct: 57 GKRYHGK 63


>sp|ENO_PYRFU|ENOLASE furiosus (strain ATCC 43587

Query: 4 GQRYHEK 10
G+RYH K
Sbjct: 57 GKRYHGK 63


>sp|ENO_PYRAB|ENOLASE abyssi (strain GE5 /

Query: 4 GQRYHEK 10
G+RYH K
Sbjct: 57 GKRYHGK 63


>sp|PUR2_METTH|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 HHKGQRYHEK 10
H KG+ YH +
Sbjct: 407 HVKGRLYHRR 416


>sp|GCH1L_HALSA|GTP cyclohydrolase 1 type 2|Halobacterium salinarum (strain ATCC 700922

Query: 3 KGQRYHE 9
KG+ YHE
Sbjct: 203 KGKLYHE 209


>sp|SYFB_METST|PHENYLALANINE--TRNA ligase beta subunit|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 HHKGQRY 7
H KG++Y
Sbjct: 179 HEKGEKY 185


>sp|MRE11_HALVD|DNA double-strand break repair protein|Haloferax volcanii (strain

Query: 2 HKGQRYHEK 10
H G YH++
Sbjct: 47 HAGDLYHDR 55


>sp|MRE11_HALSA|DNA double-strand break repair protein|Halobacterium salinarum

Query: 2 HKGQRYHEK 10
H G YH++
Sbjct: 47 HAGDLYHDR 55




123|Sequence|611|620|RYHEKQISLY

***** No hits found ******


124|Sequence|616|625|QISLYAEYDR

>sp|ASPD_METBU|L-ASPARTATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 1 QISLYAEYDR 10
++ LYA YDR
Sbjct: 26 EVELYAVYDR 35


>sp|RS9_METTP|SMALL ribosomal subunit protein uS9|Methanothrix thermoacetophila (strain

Query: 5 YAEYDR 10
YAEYDR
Sbjct: 98 YAEYDR 103


>sp|RS9_DESA1|SMALL ribosomal subunit protein uS9|Desulfurococcus amylolyticus (strain

Query: 3 SLYAEYDR 10
SL+ EYDR
Sbjct: 104 SLFKEYDR 111


>sp|THIC1_METST|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 LYAEYD 9
LYAEYD
Sbjct: 203 LYAEYD 208


>sp|G3P_HALMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 3 SLYAEYD 9
SLYAE+D
Sbjct: 94 SLYAEHD 100


>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 ISLYAEYD 9
+SLY EY+
Sbjct: 77 VSLYHEYE 84


>sp|TRM56_METM5|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus maripaludis

Query: 3 SLYAEYD 9
+LY+EYD
Sbjct: 153 TLYSEYD 159


>sp|TRM56_METM7|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus maripaludis

Query: 3 SLYAEYD 9
+LY+EYD
Sbjct: 153 TLYSEYD 159


>sp|TRM56_METMP|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus maripaludis

Query: 3 SLYAEYD 9
+LY+EYD
Sbjct: 153 TLYSEYD 159


>sp|SYK_PYRFU|LYSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ISLYAEYDR 10
++LY E+DR
Sbjct: 324 LNLYDEFDR 332


>sp|TRPE_METTH|ANTHRANILATE synthase component 1|Methanothermobacter thermautotrophicus

Query: 3 SLYAEYD 9
S+Y+EYD
Sbjct: 28 SIYSEYD 34


>sp|SYK_THEKO|LYSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 ISLYAEYDR 10
++LY E+DR
Sbjct: 325 LNLYDEFDR 333


>sp|SYE_METJA|GLUTAMATE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QISLYAEYDR 10
+I LY EY R
Sbjct: 166 RIELYYEYGR 175




125|Sequence|621|630|AEYDRPNLLP

>sp|FAEHP_METAR|BIFUNCTIONAL enzyme Fae/Hps|Methanocella arvoryzae (strain DSM 22066

Query: 5 RPNLLP 10
RPNL+P
Sbjct: 52 RPNLIP 57


>sp|Y2265_METBU|PUTATIVE nickel insertion protein|Methanococcoides burtonii (strain DSM 6242

Query: 1 AEYDRPNLL 9
AE D PN+L
Sbjct: 221 AETDMPNVL 229


>sp|Y674_METJA|UNCHARACTERIZED protein MJ0674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EYDRPNLL 9
EY +PNLL
Sbjct: 59 EYVKPNLL 66


>sp|AROA_METTH|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanothermobacter thermautotrophicus

Query: 3 YDRPNLLP 10
+D P+LLP
Sbjct: 301 HDAPDLLP 308


>sp|SYDND_METMP|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 EYDRPN 7
EY+RPN
Sbjct: 264 EYNRPN 269


>sp|FLPA_HALWD|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Haloquadratum walsbyi (strain DSM

Query: 5 RPNLLP 10
RPNL+P
Sbjct: 108 RPNLIP 113


>sp|SRP54_HYPBU|SIGNAL recognition particle 54 kDa|Hyperthermus butylicus (strain DSM 5456

Query: 2 EYDRPNLL 9
E D PNLL
Sbjct: 387 ELDNPNLL 394




126|Sequence|626|635|PNLLPFLRDS

>sp|TRPF_PYRAB|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Pyrococcus abyssi (strain GE5 /

Query: 1 PNLLPFLRD 9
P+LLP+L+D
Sbjct: 84 PSLLPYLKD 92


>sp|FLPA_SULTO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Sulfurisphaera tokodaii (strain

Query: 1 PNLLPFLRDS 10
PNL P L D+
Sbjct: 125 PNLFPILADA 134


>sp|FLPA_METKA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanopyrus kandleri (strain AV19

Query: 1 PNLLPFLRDS 10
PN++P L D+
Sbjct: 125 PNMIPILGDA 134


>sp|FLPA_SULAC|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Sulfolobus acidocaldarius (strain

Query: 1 PNLLPFLRDS 10
PN+ P L D+
Sbjct: 125 PNMFPILADA 134


>sp|FLPA_SACI7|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 1 PNLLPFLRDS 10
PN+ P L D+
Sbjct: 125 PNIFPLLADA 134


>sp|FLPA_SACI6|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 1 PNLLPFLRDS 10
PN+ P L D+
Sbjct: 125 PNIFPLLADA 134


>sp|FLPA_SACI4|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 1 PNLLPFLRDS 10
PN+ P L D+
Sbjct: 125 PNIFPLLADA 134


>sp|FLPA_SACI2|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 1 PNLLPFLRDS 10
PN+ P L D+
Sbjct: 125 PNIFPLLADA 134


>sp|FLPA_SACI1|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 1 PNLLPFLRDS 10
PN+ P L D+
Sbjct: 125 PNIFPLLADA 134


>sp|FLPA_SACI3|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 1 PNLLPFLRDS 10
PN+ P L D+
Sbjct: 125 PNIFPLLADA 134


>sp|Y107_METJA|UNCHARACTERIZED protein MJ0107|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LLPFLRDS 10
L+P+L+DS
Sbjct: 253 LIPYLKDS 260


>sp|FLPA_HALWD|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Haloquadratum walsbyi (strain DSM

Query: 1 PNLLPFLRDS 10
PNL+P L D+
Sbjct: 109 PNLIPLLCDA 118


>sp|FLPA_SACS2|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus solfataricus (strain

Query: 1 PNLLPFLRDS 10
PN+ P L D+
Sbjct: 125 PNIFPLLADA 134


>sp|TRET_THELN|TREHALOSE synthase|Thermococcus litoralis (strain ATCC 51850

Query: 2 NLLPFLRD 9
NL+P +RD
Sbjct: 59 NLVPLMRD 66


>sp|TRET_PYRFU|TREHALOSE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NLLPFLRD 9
NL+P +RD
Sbjct: 59 NLVPLMRD 66


>sp|WECC_METM5|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 2 NLLPFLRD 9
N++PFL++
Sbjct: 114 NIIPFLKE 121


>sp|ARSA_METTH|PUTATIVE arsenical pump-driving ATPase|Methanothermobacter

Query: 2 NLLPFLRD 9
N+LPF+ D
Sbjct: 185 NILPFMGD 192


>sp|FLPA_HALMA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Haloarcula marismortui (strain

Query: 2 NLLPFLRDS 10
NL P L+D+
Sbjct: 105 NLFPLLKDA 113


>sp|COBS_THEON|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermococcus onnurineus (strain NA1)

Query: 2 NLLPFL 7
NLLPFL
Sbjct: 3 NLLPFL 8


>sp|DHAS_METJA|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NLLPFLRD 9
NL+PF+++
Sbjct: 202 NLIPFIKN 209


>sp|TMCA_HALVD|TRNA(MET) cytidine acetyltransferase TmcA|Haloferax volcanii (strain ATCC

Query: 1 PNLLPFLRDS 10
P LL F RD+
Sbjct: 567 PELLSFWRDN 576




127|Sequence|631|640|FLRDSTHCPL

>sp|RPO2C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 2 LRDSTHCPL 10
+RD +CP+
Sbjct: 559 IRDKKYCPI 567


>sp|RPO2C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 2 LRDSTHCPL 10
+RD +CP+
Sbjct: 558 IRDKKYCPI 566


>sp|SYR_ARCFU|ARGININE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FLRDSTHCPL 10
FLR+S H L
Sbjct: 21 FLRESEHADL 30


>sp|RF1_THEKO|PEPTIDE chain release factor subunit|Thermococcus kodakarensis (strain ATCC

Query: 6 THCP 9
THCP
Sbjct: 354 THCP 357




128|Sequence|636|645|THCPLEKALE

>sp|Y1536_PYRFU|UNCHARACTERIZED protein PF1536|Pyrococcus furiosus (strain ATCC 43587

Query: 3 CPLEKALE 10
CPLEK +E
Sbjct: 135 CPLEKVVE 142


>sp|HTPX_METKA|PROTEASE HtpX homolog|Methanopyrus kandleri (strain AV19 /

Query: 1 THCPLEKALE 10
TH P+EK +E
Sbjct: 297 THPPVEKRVE 306


>sp|AATC_METTH|A-TYPE ATP synthase subunit C|Methanothermobacter thermautotrophicus

Query: 4 PLEKALE 10
P+EKALE
Sbjct: 99 PIEKALE 105


>sp|RISB_PYRCJ|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 THCPLEKALE 10
TH L+KALE
Sbjct: 16 THLMLQKALE 25


>sp|TRPD_HALVD|ANTHRANILATE phosphoribosyltransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 THCPLEKAL 9
+H P+E+AL
Sbjct: 206 SHMPVERAL 214


>sp|Y868_METJA|UNCHARACTERIZED protein MJ0868|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PLEKALE 10
PLEKA+E
Sbjct: 83 PLEKAVE 89


>sp|SUCC_PYRCJ|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum calidifontis (strain

Query: 2 HCPLEKALE 10
H LEKALE
Sbjct: 220 HPELEKALE 228


>sp|SUCC_PYRAR|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum arsenaticum (strain

Query: 2 HCPLEKALE 10
H LEKALE
Sbjct: 220 HPELEKALE 228


>sp|SUCC_PYRAE|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum aerophilum (strain

Query: 2 HCPLEKALE 10
H LEKALE
Sbjct: 220 HPELEKALE 228


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 THCPLEK 7
+ CPLEK
Sbjct: 506 SFCPLEK 512


>sp|SUCC_PYRIL|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum islandicum (strain

Query: 2 HCPLEKALE 10
H LEKALE
Sbjct: 220 HPDLEKALE 228


>sp|Y1640_METAR|UPF0597 protein UNCMA_16400|Methanocella arvoryzae (strain DSM 22066

Query: 3 CPLEKAL 9
CPL KAL
Sbjct: 215 CPLGKAL 221


>sp|Y115_METJA|UNCHARACTERIZED protein MJ0115|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HCPLEKAL 9
+CP+ KAL
Sbjct: 28 YCPIHKAL 35


>sp|AATA_METAR|A-TYPE ATP synthase subunit A|Methanocella arvoryzae (strain DSM 22066

Query: 1 THCPLEKALE 10
T+C L+K L+
Sbjct: 506 TYCSLDKQLK 515




129|Sequence|641|650|EKALEICQQR

>sp|MTBB3_METMA|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KALEICQQ 9
+A+E+CQQ
Sbjct: 132 QAMEVCQQ 139


>sp|MTBB3_METBA|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina barkeri

Query: 2 KALEICQQ 9
+A+E+CQQ
Sbjct: 84 QAMEVCQQ 91


>sp|MTBB3_METAC|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina acetivorans (strain ATCC

Query: 2 KALEICQQ 9
+A+E+CQQ
Sbjct: 132 QAMEVCQQ 139


>sp|MTBB2_METMA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KALEICQQ 9
+A+E+CQQ
Sbjct: 132 QAMEVCQQ 139


>sp|MTBB2_METBF|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri (strain Fusaro /

Query: 2 KALEICQQ 9
+A+E+CQQ
Sbjct: 132 QAMEVCQQ 139


>sp|MTBB2_METBA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri

Query: 2 KALEICQQ 9
+A+E+CQQ
Sbjct: 84 QAMEVCQQ 91


>sp|MTBB2_METAC|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina acetivorans (strain ATCC

Query: 2 KALEICQQ 9
+A+E+CQQ
Sbjct: 132 QAMEVCQQ 139


>sp|MTBB1_METMA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KALEICQQ 9
+A+E+CQQ
Sbjct: 132 QAMEVCQQ 139


>sp|MTBB1_METBF|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri (strain Fusaro /

Query: 2 KALEICQQ 9
+A+E+CQQ
Sbjct: 132 QAMEVCQQ 139


>sp|MTBB1_METBA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri

Query: 2 KALEICQQ 9
+A+E+CQQ
Sbjct: 132 QAMEVCQQ 139


>sp|MTBB1_METAC|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina acetivorans (strain ATCC

Query: 2 KALEICQQ 9
+A+E+CQQ
Sbjct: 132 QAMEVCQQ 139


>sp|PURL_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 EKALEICQQ 9
EKA EIC++
Sbjct: 313 EKAFEICKK 321


>sp|RNZ_PYRHO|RIBONUCLEASE Z|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EKALEICQQ 9
EKAL IC Q
Sbjct: 276 EKALSICPQ 284


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 EKALEIC 7
E+ALEIC
Sbjct: 801 EEALEIC 807


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 1 EKALEICQQ 9
E A+EIC++
Sbjct: 313 EAAMEICRK 321


>sp|HIS4_PYRAE|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Pyrobaculum aerophilum (strain

Query: 1 EKALEICQ 8
E+AL +CQ
Sbjct: 86 ERALSLCQ 93


>sp|ATGT_SULTO|TRNA-GUANINE(15) transglycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EKALEICQQR 10
+KA+ IC++R
Sbjct: 394 DKAIIICEKR 403


>sp|GUAAA_METAR|GMP synthase [glutamine-hydrolyzing] subunit A|Methanocella arvoryzae

Query: 4 LEICQQR 10
+E+C+QR
Sbjct: 182 IEVCRQR 188


>sp|HDRB_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit B|Methanosarcina mazei (strain

Query: 1 EKALEICQQR 10
EKA ++C QR
Sbjct: 20 EKATKLCLQR 29


>sp|CAS1D_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 4|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EKALEICQQ 9
EK+L IC++
Sbjct: 124 EKSLAICRE 132


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 4 LEICQQR 10
LE CQQR
Sbjct: 315 LEDCQQR 321


>sp|RPO3_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo3|Sulfurisphaera tokodaii (strain DSM

Query: 1 EKALEICQQ 9
EKA E+C +
Sbjct: 178 EKAFEVCPE 186




130|Sequence|646|655|ICQQRNFVEE

>sp|FEN_METTP|FLAP endonuclease 1|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ICQQRNFVEE 10
+C +RNF E+
Sbjct: 303 LCNERNFSED 312


>sp|FEN_PYRHO|FLAP endonuclease 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ICQQRNFVEE 10
+C + NF EE
Sbjct: 304 LCDEHNFSEE 313


>sp|PHNC_HALSA|PHOSPHONATES import ATP-binding protein PhnC|Halobacterium salinarum (strain

Query: 1 ICQQRNFVEE 10
I QQ N +EE
Sbjct: 77 IFQQHNIIEE 86


>sp|SYR_PYRIL|ARGININE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 QRNFVEE 10
QRN VEE
Sbjct: 254 QRNIVEE 260


>sp|SYK_METKA|LYSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 5 RNFVEE 10
RNFVEE
Sbjct: 115 RNFVEE 120


>sp|CDC6N_HALMA|ORC1-TYPE DNA replication protein 14|Haloarcula marismortui (strain ATCC

Query: 3 QQRNFVEE 10
Q+RNF E+
Sbjct: 424 QKRNFAED 431


>sp|GUAAB_METVS|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcus vannielii

Query: 1 ICQQRNFV 8
IC++ NF+
Sbjct: 208 ICKEANFI 215


>sp|GUAAB_METMP|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcus

Query: 1 ICQQRNFV 8
IC++ NF+
Sbjct: 208 ICKEANFI 215


>sp|GUAAB_METM7|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcus

Query: 1 ICQQRNFV 8
IC++ NF+
Sbjct: 208 ICKEANFI 215




131|Sequence|651|660|NFVEETVYLL

>sp|TRUD_PYRAE|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum aerophilum (strain ATCC

Query: 2 FVEETVYL 9
FVEE V+L
Sbjct: 238 FVEERVFL 245


>sp|Y177_METMA|MACRO domain-containing protein MM_0177|Methanosarcina mazei (strain ATCC

Query: 1 NFVEETVYLL 10
N + ETVYL+
Sbjct: 160 NEIPETVYLV 169


>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FVEETVY 8
FVE T+Y
Sbjct: 513 FVERTIY 519


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 EETVYL 9
EETVYL
Sbjct: 220 EETVYL 225




132|Sequence|656|665|TVYLLSRMGN

>sp|TRPA_METMA|TRYPTOPHAN synthase alpha chain|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VYLLSRMG 9
+YL+SR+G
Sbjct: 181 IYLVSRLG 188


>sp|TRPA_METAC|TRYPTOPHAN synthase alpha chain|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VYLLSRMG 9
+YL+SR+G
Sbjct: 182 IYLVSRLG 189


>sp|TRPA_METBF|TRYPTOPHAN synthase alpha chain|Methanosarcina barkeri (strain Fusaro /

Query: 2 VYLLSRMG 9
+YL+SR+G
Sbjct: 173 LYLVSRLG 180


>sp|MPGS_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 VYLLSRMG 9
VYLL R G
Sbjct: 276 VYLLERFG 283


>sp|GATE_CALMQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Caldivirga maquilingensis (strain ATCC

Query: 1 TVYLLSRMG 9
TVY L R+G
Sbjct: 174 TVYRLDRLG 182


>sp|Y076_METFV|UNCHARACTERIZED protein Mfer_0076|Methanothermus fervidus (strain ATCC 43054

Query: 1 TVYLLSRMGN 10
TVY L + GN
Sbjct: 98 TVYRLEKCGN 107


>sp|MPGS_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VYLLSRMG 9
VYLL R G
Sbjct: 276 VYLLERFG 283


>sp|Y2362_ARCFU|UNCHARACTERIZED protein AF_2362|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VYLLSRMG 9
+YLL RMG
Sbjct: 107 LYLLYRMG 114




133|Sequence|661|670|SRMGNSRSAL

>sp|SYE_SACS2|GLUTAMATE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 MGNSRSAL 10
+GN+RSA+
Sbjct: 116 LGNARSAI 123




134|Sequence|666|675|SRSALKMIME

***** No hits found ******


135|Sequence|671|680|KMIMEELHDV

>sp|MTAB_METBF|METHANOL--CORRINOID protein co-methyltransferase|Methanosarcina barkeri (strain Fusaro

Query: 1 KMIMEELHD 9
K IME+ HD
Sbjct: 106 KTIMEKYHD 114


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 1 KMIMEELHDV 10
K +ME +HD+
Sbjct: 578 KYVMELIHDL 587


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 4 MEELHD 9
+EELHD
Sbjct: 448 LEELHD 453


>sp|SYK_METTH|LYSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KMIMEELHD 9
+M EELHD
Sbjct: 483 EMSAEELHD 491


>sp|PDAD_THEKO|PYRUVOYL-DEPENDENT arginine decarboxylase|Thermococcus kodakarensis (strain ATCC

Query: 4 MEELHDV 10
ME++HDV
Sbjct: 53 MEKVHDV 59


>sp|Y031_METPE|PUTATIVE HTH-type transcriptional regulatory protein|Methanosphaerula

Query: 5 EELHDV 10
EELHD+
Sbjct: 287 EELHDI 292


>sp|Y245_SULTO|UPF0210 protein STK_02450|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 MEELHDV 10
++ELHD+
Sbjct: 229 LQELHDI 235


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KMIMEELH 8
K I+EELH
Sbjct: 795 KKIIEELH 802




136|Sequence|676|685|ELHDVDKAIE

>sp|TRUD_THEGJ|PROBABLE tRNA pseudouridine synthase D|Thermococcus gammatolerans (strain

Query: 1 ELHDVDKAIE 10
E DVD+A+E
Sbjct: 213 ETEDVDRALE 222


>sp|PFDB_PYRCJ|PREFOLDIN subunit beta|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ELHDVDKAI 9
EL +VDKAI
Sbjct: 35 ELREVDKAI 43


>sp|PFDB_PYRAR|PREFOLDIN subunit beta|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ELHDVDKAI 9
EL +VDKAI
Sbjct: 35 ELKEVDKAI 43


>sp|RL2_METTH|LARGE ribosomal subunit protein uL2|Methanothermobacter

Query: 3 HDVDKAI 9
HD DKA+
Sbjct: 135 HDADKAV 141


>sp|GAPN_THETE|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Thermoproteus tenax

Query: 1 ELHDVDKAIE 10
E+ D+D+AIE
Sbjct: 405 EVKDLDQAIE 414


>sp|HIS5_METKA|IMIDAZOLE glycerol phosphate synthase subunit|Methanopyrus kandleri (strain

Query: 1 ELHDVDKAI 9
ELHD D I
Sbjct: 35 ELHDADAVI 43


>sp|PHNC1_HALMA|PHOSPHONATES import ATP-binding protein PhnC|Haloarcula marismortui (strain ATCC

Query: 2 LHDVDKAIE 10
LH+VD A+E
Sbjct: 206 LHEVDLALE 214


>sp|RL2_METST|LARGE ribosomal subunit protein uL2|Methanosphaera stadtmanae (strain

Query: 3 HDVDKAI 9
HDVDK +
Sbjct: 135 HDVDKTM 141


>sp|RNP3_METJA|RIBONUCLEASE P protein component 3|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ELHDVD 6
ELHDVD
Sbjct: 96 ELHDVD 101


>sp|CAS4_HALVD|CRISPR-ASSOCIATED exonuclease Cas4|Haloferax volcanii (strain ATCC 29605

Query: 1 ELHDVDK 7
E+HD+DK
Sbjct: 116 EIHDIDK 122


>sp|AKSA_METJA|HOMOCITRATE synthase AksA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DVDKAIE 10
D+DKAIE
Sbjct: 107 DIDKAIE 113


>sp|FOLCP_HALVD|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 1 ELHDVDKAIE 10
E +D+D A+E
Sbjct: 587 EFYDIDDAVE 596


>sp|PRIS_METHJ|DNA primase small subunit PriS|Methanospirillum hungatei JF-1 (strain

Query: 1 ELHDVDKAIE 10
ELHD D I+
Sbjct: 320 ELHDFDPLID 329


>sp|MTBC_METBA|DIMETHYLAMINE corrinoid protein|Methanosarcina barkeri

Query: 1 ELHDVDKAI 9
++HD+ KAI
Sbjct: 102 DVHDIGKAI 110


>sp|Y810_PYRAR|UPF0173 metal-dependent hydrolase Pars_0810|Pyrobaculum arsenaticum (strain

Query: 1 ELHDVDKAI 9
EL+D+D A+
Sbjct: 150 ELYDIDVAL 158


>sp|GGGPS_SACI7|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 HDVDKAIE 10
DVDKAI+
Sbjct: 240 RDVDKAIK 247


>sp|GGGPS_SACI3|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.16.27)

Query: 3 HDVDKAIE 10
DVDKAI+
Sbjct: 240 RDVDKAIK 247


>sp|GGGPS_SACI2|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 HDVDKAIE 10
DVDKAI+
Sbjct: 240 RDVDKAIK 247


>sp|GGGPS_SACI1|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 HDVDKAIE 10
DVDKAI+
Sbjct: 240 RDVDKAIK 247


>sp|GGGPS_SACI6|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 HDVDKAIE 10
DVDKAI+
Sbjct: 240 RDVDKAIK 247


>sp|GGGPS_SACI4|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 HDVDKAIE 10
DVDKAI+
Sbjct: 240 RDVDKAIK 247




137|Sequence|681|690|DKAIEFAKEQ

>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 1 DKAIEFAKE 9
DK IEFA+E
Sbjct: 359 DKGIEFAEE 367


>sp|CIMA_METPE|PUTATIVE (R)-citramalate synthase CimA|Methanosphaerula palustris (strain

Query: 1 DKAIEFAKEQ 10
+KA+++AKE+
Sbjct: 123 NKAVDYAKER 132


>sp|YPZ8_METTF|UNCHARACTERIZED protein ORF8'|Methanothermobacter thermautotrophicus

Query: 1 DKAIEFAKEQ 10
DKAIEF Q
Sbjct: 17 DKAIEFKFPQ 26


>sp|CARB1_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 1 DKAIEFAKE 9
D+A+EFA+E
Sbjct: 150 DEAVEFAEE 158


>sp|CIMA_METJA|(R)-CITRAMALATE synthase CimA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KAIEFAKEQ 10
KA+E+AKE
Sbjct: 118 KAVEYAKEH 126


>sp|Y786_METJA|UNCHARACTERIZED protein MJ0786|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DKAIEFAKEQ 10
DK+IEF K +
Sbjct: 90 DKSIEFLKNK 99


>sp|GLYA_METAR|SERINE hydroxymethyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 2 KAIEFAKE 9
KAIE AKE
Sbjct: 71 KAIELAKE 78


>sp|HPS_METBF|3-HEXULOSE-6-PHOSPHATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DKAIEFAKE 9
D+A+E AKE
Sbjct: 2 DRAVEIAKE 10


>sp|HOSA_PYRHO|HOMOCITRATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KAIEFAKEQ 10
KAIE+AK+
Sbjct: 115 KAIEYAKDH 123


>sp|PYRC_METST|DIHYDROOROTASE stadtmanae (strain ATCC 43021

Query: 1 DKAIEFAKE 9
++AIEFAK+
Sbjct: 212 NRAIEFAKK 220


>sp|Y1207_METJA|UNCHARACTERIZED N-acetyltransferase MJ1207|Methanocaldococcus jannaschii (strain

Query: 1 DKAIEFAKEQ 10
+KAIE+AK++
Sbjct: 176 NKAIEYAKKR 185


>sp|SUCC_HALMA|SUCCINATE--COA ligase [ADP-forming] subunit beta|Haloarcula marismortui (strain

Query: 2 KAIEFAKE 9
+A+E+AKE
Sbjct: 372 RAVEYAKE 379


>sp|Y804_METJA|UNCHARACTERIZED protein MJ0804|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KAIEFAKE 9
KAIEF K+
Sbjct: 95 KAIEFCKD 102


>sp|CIMA_ARCFU|PUTATIVE (R)-citramalate synthase CimA|Archaeoglobus fulgidus (strain ATCC

Query: 3 AIEFAKEQ 10
AIE+AKE+
Sbjct: 120 AIEYAKER 127


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DKAIEFAKE 9
DK IE+A+E
Sbjct: 360 DKGIEYAEE 368


>sp|CIMA_METMJ|PUTATIVE (R)-citramalate synthase CimA|Methanoculleus marisnigri (strain

Query: 3 AIEFAKEQ 10
A+E+AKE+
Sbjct: 125 AVEYAKER 132




138|Sequence|686|695|FAKEQDDGEL

>sp|GFCR_METS3|TRANSCRIPTIONAL regulator GfcR|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 KEQDDGE 9
KE+DDGE
Sbjct: 124 KEKDDGE 130


>sp|ARGC_METS3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 FAKEQDDGEL 10
F K DDGE+
Sbjct: 265 FIKLMDDGEI 274




139|Sequence|691|700|DDGELWEDLI

>sp|NADM_PYRFU|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DGELWEDLI 10
+GE WEDL+
Sbjct: 140 EGEPWEDLV 148


>sp|NADM_PYRHO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GELWEDLI 10
GE WEDL+
Sbjct: 139 GEPWEDLV 146


>sp|NADM_PYRAB|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 GELWEDLI 10
GE WEDL+
Sbjct: 139 GEPWEDLV 146


>sp|DIPPS_ARCFU|BIFUNCTIONAL IPC transferase and DIPP|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DGELWEDL 9
DGELW D+
Sbjct: 266 DGELWMDV 273


>sp|THIOL_METTL|ACETYL-COA acetyltransferase|Methanothermococcus thermolithotrophicus

Query: 3 GELWED 8
GELWED
Sbjct: 15 GELWED 20


>sp|IF2G_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 DGELWE 7
DGE+WE
Sbjct: 54 DGEVWE 59


>sp|NADM_THEON|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 DGELWEDLI 10
+GE WE+L+
Sbjct: 139 EGEPWEELV 147


>sp|NADM_THEKO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DGELWEDLI 10
+GE WE+L+
Sbjct: 140 EGEPWEELV 148


>sp|MOAA_THEKO|PROBABLE GTP 3',8-cyclase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DDGELWE 7
+DGE+W+
Sbjct: 161 NDGEIWD 167


>sp|NADM_METPE|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanosphaerula palustris (strain ATCC

Query: 2 DGELWEDLI 10
+GE WED +
Sbjct: 136 NGEPWEDRV 144


>sp|GCS2_HALSA|GLUTAMATE--CYSTEINE ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DDGELWEDL 9
D GELW D+
Sbjct: 220 DRGELWYDV 228


>sp|GCS2_HALS3|GLUTAMATE--CYSTEINE ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DDGELWEDL 9
D GELW D+
Sbjct: 220 DRGELWYDV 228


>sp|GLMM_METJA|PHOSPHOGLUCOSAMINE mutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GELWED 8
GE+WED
Sbjct: 134 GEIWED 139


>sp|NADM_METMA|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DGELWEDLI 10
+GE WE L+
Sbjct: 136 EGEKWEHLV 144


>sp|ATGT_METVS|TRNA-GUANINE(15) transglycosylase|Methanococcus vannielii (strain ATCC 35089

Query: 2 DGELWE 7
DG LWE
Sbjct: 326 DGNLWE 331


>sp|ATGT_META3|TRNA-GUANINE(15) transglycosylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 DGELWE 7
DG LWE
Sbjct: 326 DGNLWE 331


>sp|NADK_THESM|NAD kinase|Thermococcus sibiricus (strain DSM 12597

Query: 2 DGELWEDL 9
DGEL ED+
Sbjct: 156 DGELAEDI 163


>sp|GCS2_HALWD|GLUTAMATE--CYSTEINE ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DDGELWEDL 9
D GELW D+
Sbjct: 222 DRGELWYDV 230


>sp|Y868_THEGJ|UPF0200 protein TGAM_0868|Thermococcus gammatolerans (strain DSM 15229

Query: 1 DDGELWEDL 9
DD + WED
Sbjct: 130 DDPQTWEDF 138


>sp|RL3_METS5|LARGE ribosomal subunit protein uL3|Metallosphaera sedula (strain ATCC

Query: 3 GELWEDL 9
GE+W DL
Sbjct: 103 GEVWGDL 109


>sp|HIS6_METKA|IMIDAZOLE glycerol phosphate synthase subunit|Methanopyrus kandleri (strain

Query: 1 DDGELW 6
DDGE W
Sbjct: 152 DDGEYW 157


>sp|TIAS_ACIS3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Acidilobus saccharovorans

Query: 1 DDGELW 6
D GELW
Sbjct: 225 DPGELW 230


>sp|Y1334_THEKO|UPF0200 protein TK1334|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DDGELWEDL 9
DD + WED
Sbjct: 130 DDPQTWEDF 138


>sp|ATGT_METJA|TRNA-GUANINE(15) transglycosylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DGELWE 7
DG LWE
Sbjct: 327 DGSLWE 332


>sp|THIOL_METJA|ACETYL-COA acetyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 GELWE 7
GELWE
Sbjct: 15 GELWE 19


>sp|Y2337_ARCFU|UNCHARACTERIZED protein AF_2337|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DDGELWEDLI 10
+D E WED+I
Sbjct: 288 EDPEFWEDVI 297


>sp|NADM_METJA|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 DGELWEDLI 10
+GE WE L+
Sbjct: 135 NGEKWEHLV 143


>sp|NADM_HALSA|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 2 DGELWEDLI 10
DG+ WE L+
Sbjct: 136 DGDDWESLV 144


>sp|NADM_HALS3|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 2 DGELWEDLI 10
DG+ WE L+
Sbjct: 136 DGDDWESLV 144


>sp|ATGT_METKA|TRNA-GUANINE(15) transglycosylase|Methanopyrus kandleri (strain AV19 /

Query: 3 GELWE 7
GELWE
Sbjct: 322 GELWE 326


>sp|Y1344_THEON|UPF0200 protein TON_1344|Thermococcus onnurineus (strain NA1)

Query: 1 DDGELWEDL 9
DD + WED
Sbjct: 130 DDPQSWEDF 138


>sp|RNZ_NITMS|RIBONUCLEASE Z|Nitrosopumilus maritimus (strain SCM1)

Query: 2 DGELWEDL 9
+GELW L
Sbjct: 167 EGELWNKL 174


>sp|GCS2_HALVD|GLUTAMATE--CYSTEINE ligase|Haloferax volcanii (strain ATCC 29605

Query: 1 DDGELWEDL 9
D GELW D+
Sbjct: 220 DRGELWYDV 228


>sp|GCS2_NATPD|GLUTAMATE--CYSTEINE ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DDGELWEDL 9
D GELW D+
Sbjct: 220 DRGELWYDV 228


>sp|TRM1_THEKO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus kodakarensis

Query: 2 DGELWED 8
DGEL+E+
Sbjct: 96 DGELYEE 102


>sp|THI4_METVS|THIAMINE thiazole synthase|Methanococcus vannielii (strain ATCC 35089

Query: 4 ELWEDLI 10
E+W DLI
Sbjct: 22 EMWMDLI 28


>sp|NADM_METM5|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain C5 /

Query: 2 DGELWEDLI 10
DG WE L+
Sbjct: 135 DGSTWEHLV 143


>sp|LYSK_PYRAE|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrobaculum aerophilum

Query: 1 DDGELWEDLI 10
D GEL ED++
Sbjct: 2 DVGELLEDVL 11


>sp|KAE1B_METVS|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 GELWEDLI 10
GE+W+ +I
Sbjct: 514 GEIWDKII 521


>sp|GCS2_HALLT|GLUTAMATE--CYSTEINE ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 DDGELWEDL 9
D GELW D+
Sbjct: 220 DRGELWFDV 228




140|Sequence|696|705|WEDLILYSID

>sp|SYFB_PYRAB|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 WEDLILYS 8
WEDL+LY+
Sbjct: 24 WEDLVLYA 31


>sp|SYFB_PYRHO|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WEDLILYS 8
WEDL+LY+
Sbjct: 24 WEDLVLYA 31


>sp|SYFB_PYRFU|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WEDLILYS 8
WEDL+LY+
Sbjct: 24 WEDLVLYA 31


>sp|SYFB_THEON|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus onnurineus (strain NA1)

Query: 1 WEDLILYS 8
WEDL LY+
Sbjct: 24 WEDLFLYA 31


>sp|SYFB_THEKO|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 WEDLILYS 8
WEDL LY+
Sbjct: 24 WEDLFLYA 31


>sp|SYFB_THEGJ|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 1 WEDLILYS 8
WEDL LY+
Sbjct: 24 WEDLFLYA 31


>sp|SYFB_THESM|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus sibiricus (strain DSM 12597

Query: 1 WEDLILYS 8
WEDL LY+
Sbjct: 24 WEDLFLYA 31


>sp|GATE_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 2 EDLILYSID 10
ED +LYS+D
Sbjct: 171 EDGVLYSLD 179


>sp|GATE_HALS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 2 EDLILYSID 10
ED +LYS+D
Sbjct: 171 EDGVLYSLD 179


>sp|LEUC1_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EDLILYSI 9
+DLILY+I
Sbjct: 177 KDLILYTI 184


>sp|GLCS_SACS2|GLUCOSE-BINDING protein GlcS|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WEDLILY 7
WED+ LY
Sbjct: 250 WEDIFLY 256


>sp|MTRB_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanosarcina acetivorans (strain

Query: 2 EDLILYSID 10
ED ILYS+D
Sbjct: 26 EDSILYSMD 34


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WEDLILYS 8
W D+ +YS
Sbjct: 421 WRDIYIYS 428


>sp|TREZ_SACSO|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (Sulfolobus

Query: 2 EDLILYSI 9
EDLI+Y I
Sbjct: 101 EDLIIYEI 108


>sp|IPK_METJA|ISOPENTENYL phosphate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DLILYSID 10
DLILY+ D
Sbjct: 173 DLILYATD 180




141|Sequence|701|710|LYSIDKPPFI

>sp|LONB_THEVO|ARCHAEAL Lon protease|Thermoplasma volcanium (strain ATCC 51530

Query: 3 SIDKPPFI 10
S DKPPF+
Sbjct: 186 STDKPPFV 193


>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 DKPPFI 10
DKPPF+
Sbjct: 188 DKPPFV 193


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LYSIDKPPF 9
+YS D PP+
Sbjct: 923 VYSADNPPY 931


>sp|OFOB1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 2 YSIDKPP 8
YSID PP
Sbjct: 279 YSIDNPP 285


>sp|EF1A_AERPE|ELONGATION factor 1-alpha|Aeropyrum pernix (strain ATCC 700893

Query: 2 YSIDKPPFI 10
Y +DK PFI
Sbjct: 182 YQVDKIPFI 190


>sp|GCSPA_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 2 YSIDKPPFI 10
Y D PPF+
Sbjct: 73 YFTDPPPFV 81


>sp|RTCB_NANEQ|TRNA-SPLICING ligase RtcB|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 YSIDKPPFI 10
+S+D PP I
Sbjct: 79 FSLDNPPVI 87


>sp|NCPP_PYRNV|PROBABLE inosine/xanthosine triphosphatase|Pyrobaculum neutrophilum

Query: 3 SIDKPP 8
S+DKPP
Sbjct: 31 SVDKPP 36


>sp|RF1_ARCFU|PEPTIDE chain release factor subunit|Archaeoglobus fulgidus (strain ATCC

Query: 4 IDKPPF 9
I+KPPF
Sbjct: 339 IEKPPF 344


>sp|EF1A_METTP|ELONGATION factor 1-alpha|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 YSIDKPPFI 10
Y ID+ PFI
Sbjct: 176 YKIDEVPFI 184


>sp|SPSS_METKA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 LYSIDKPP 8
L+ I+KPP
Sbjct: 54 LHEIEKPP 61


>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LYSIDKP 7
LYS++KP
Sbjct: 368 LYSVEKP 374


>sp|RS3A_THEAC|SMALL ribosomal subunit protein eS1|Thermoplasma acidophilum (strain

Query: 2 YSIDKPPFI 10
Y+++ PP++
Sbjct: 20 YTVESPPYL 28


>sp|EF1A_METKA|ELONGATION factor 1-alpha|Methanopyrus kandleri (strain AV19 /

Query: 2 YSIDKPPFI 10
Y++D+ PFI
Sbjct: 164 YNVDEIPFI 172


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 YSIDKPP 8
+SID PP
Sbjct: 65 FSIDTPP 71


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 YSIDKPPFI 10
Y +D PP++
Sbjct: 43 YFLDGPPYV 51


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YSIDKPPFI 10
Y +D PP++
Sbjct: 43 YFLDGPPYV 51


>sp|HEM3_AERPE|PROBABLE porphobilinogen deaminase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LYSIDKPPF 9
L +DKPP+
Sbjct: 214 LRDLDKPPW 222


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YSIDKPPFI 10
Y +D PP++
Sbjct: 43 YFLDGPPYV 51


>sp|RLME_THEVO|RIBOSOMAL RNA large subunit methyltransferase|Thermoplasma volcanium (strain

Query: 2 YSIDKPP 8
Y I KPP
Sbjct: 172 YKISKPP 178


>sp|ILVD_PYRIL|DIHYDROXY-ACID dehydratase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LYSIDKP 7
LYS++KP
Sbjct: 368 LYSVEKP 374


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 YSIDKPPFI 10
Y +D PP++
Sbjct: 43 YFLDGPPYV 51


>sp|CAPPA_METAC|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LYSIDKPP 8
LYSI PP
Sbjct: 394 LYSIGLPP 401


>sp|CAPPA_METMA|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LYSIDKPP 8
LYSI PP
Sbjct: 394 LYSIGLPP 401


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii (strain

Query: 1 LYSIDKPPFI 10
LYS K PF+
Sbjct: 578 LYSSKKIPFV 587


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 YSIDKPP 8
Y+ID PP
Sbjct: 36 YAIDTPP 42


>sp|CBIT_PYRAE|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 LYSIDKPPF 9
+Y+IDK P
Sbjct: 68 VYAIDKDPL 76


>sp|RL10E_METJA|LARGE ribosomal subunit protein uL16|Methanocaldococcus jannaschii

Query: 4 IDKPPF 9
+DKPP+
Sbjct: 13 VDKPPY 18


>sp|CAPPA_METBF|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LYSIDKPP 8
LYSI PP
Sbjct: 394 LYSIGLPP 401


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YSIDKPP 8
Y+ID PP
Sbjct: 36 YAIDTPP 42


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YSIDKPP 8
Y+ID PP
Sbjct: 36 YAIDTPP 42


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 YSIDKPP 8
Y+ID PP
Sbjct: 36 YAIDTPP 42


>sp|Y1401_METJA|PROBABLE ATP-dependent helicase MJ1401|Methanocaldococcus jannaschii (strain

Query: 2 YSIDKPPFI 10
Y ID+ P+I
Sbjct: 595 YDIDRVPYI 603


>sp|PCNA2_SULOH|DNA polymerase sliding clamp 2|Sulfurisphaera ohwakuensis

Query: 2 YSIDKP 7
Y+IDKP
Sbjct: 60 YTIDKP 65


>sp|PCNA2_SULTO|DNA polymerase sliding clamp 2|Sulfurisphaera tokodaii (strain DSM

Query: 2 YSIDKP 7
Y+IDKP
Sbjct: 60 YTIDKP 65


>sp|NURA_PYRFU|DNA double-strand break repair nuclease|Pyrococcus furiosus (strain

Query: 1 LYSIDK 6
LYSIDK
Sbjct: 280 LYSIDK 285




142|Sequence|706|715|KPPFITGLLN

>sp|TRPF_NATPD|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PPFITGLL 9
PPF+T +L
Sbjct: 53 PPFVTAVL 60


>sp|THI4_PYRAE|THIAMINE thiazole synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PPFITGLL 9
PP +TGLL
Sbjct: 133 PPRVTGLL 140


>sp|TRPF_HALMA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Haloarcula marismortui (strain ATCC 43049

Query: 2 PPFITGLL 9
PPF+T +L
Sbjct: 53 PPFVTSVL 60


>sp|PRIL_METJA|DNA primase large subunit PriL|Methanocaldococcus jannaschii (strain

Query: 2 PPFITGLLN 10
PP I G+LN
Sbjct: 249 PPCIRGILN 257


>sp|NADK_HALSA|NAD kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PPFITGL 8
PP +TGL
Sbjct: 213 PPLVTGL 219


>sp|NADK_HALS3|NAD kinase|Halobacterium salinarum (strain ATCC 29341

Query: 2 PPFITGL 8
PP +TGL
Sbjct: 213 PPLVTGL 219


>sp|TRPF_HALLT|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 PPFITGLL 9
PPF+T L
Sbjct: 53 PPFVTATL 60


>sp|GGGPS_METLZ|GERANYLGERANYLGLYCERYL phosphate synthase|Methanocorpusculum labreanum (strain ATCC

Query: 2 PPFITGL 8
P FITGL
Sbjct: 90 PAFITGL 96


>sp|Y1031_METJA|UNCHARACTERIZED transporter MJ1031|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PPFITGLLN 10
PP ITG+L+
Sbjct: 166 PPLITGILS 174


>sp|FWDB_METMP|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanococcus

Query: 2 PPFITGL 8
PP ITGL
Sbjct: 384 PPAITGL 390


>sp|COFG_METJA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KPPFITGLL 9
K PF TGLL
Sbjct: 192 KIPFTTGLL 200


>sp|TRPF_HALSA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PPFITGLL 9
PPF+T +L
Sbjct: 53 PPFVTSVL 60


>sp|TRPF_HALS3|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Halobacterium salinarum (strain ATCC 29341

Query: 2 PPFITGLL 9
PPF+T +L
Sbjct: 53 PPFVTSVL 60


>sp|GCST_PYRAB|PROBABLE aminomethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 KPPFITGL 8
KPP I+G+
Sbjct: 76 KPPAISGI 83


>sp|COFG_METB6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoregula boonei (strain DSM 21154

Query: 1 KPPFITGLL 9
K PF TGLL
Sbjct: 160 KIPFTTGLL 168


>sp|SECD_METTH|PROTEIN-EXPORT membrane protein SecD|Methanothermobacter thermautotrophicus

Query: 1 KPPFITG 7
+PP ITG
Sbjct: 128 QPPIITG 134


>sp|COFG_METKA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 KPPFITGLL 9
K PF TG+L
Sbjct: 165 KVPFTTGIL 173


>sp|RNP1_AERPE|RIBONUCLEASE P protein component 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 PPFITGL 8
PP +TGL
Sbjct: 14 PPLLTGL 20


>sp|HPPA_PYRAE|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Pyrobaculum aerophilum (strain

Query: 3 PFITGLL 9
P ITGLL
Sbjct: 610 PLITGLL 616


>sp|COFG_METTH|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 PFITGLL 9
PF TGLL
Sbjct: 161 PFTTGLL 167


>sp|AROA_METMP|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain DSM

Query: 1 KPPFITGLLN 10
K P+I G+L+
Sbjct: 6 KTPYIKGILS 15


>sp|COFG_METM5|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C5 /

Query: 1 KPPFITGLL 9
K PF TG+L
Sbjct: 192 KIPFTTGIL 200


>sp|COFG_METM7|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C7 /

Query: 1 KPPFITGLL 9
K PF TG+L
Sbjct: 192 KIPFTTGIL 200


>sp|COFG_METM6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C6 /

Query: 1 KPPFITGLL 9
K PF TG+L
Sbjct: 192 KIPFTTGIL 200


>sp|COFG_META3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KPPFITGLL 9
K PF TG+L
Sbjct: 197 KIPFTTGIL 205


>sp|COFG_METVS|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 KPPFITGLL 9
K PF TG+L
Sbjct: 192 KIPFTTGIL 200


>sp|COFG_METMP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KPPFITGLL 9
K PF TG+L
Sbjct: 170 KIPFTTGIL 178


>sp|AROA_METM6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 KPPFITGLLN 10
K P I G+LN
Sbjct: 6 KTPKINGILN 15


>sp|COFG_METBU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 KPPFITGLL 9
K PF TG+L
Sbjct: 161 KIPFTTGIL 169




143|Sequence|711|720|TGLLNNIGTH

>sp|HMGCS_METBF|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GLLNNIGT 9
GLLN +GT
Sbjct: 219 GLLNKLGT 226


>sp|RAD50_NANEQ|DNA double-strand break repair Rad50|Nanoarchaeum equitans (strain

Query: 3 LLNNIGTH 10
+LNN+ TH
Sbjct: 8 ILNNVKTH 15


>sp|HEM1_METAC|GLUTAMYL-TRNA reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GLLNNIGTH 10
GLLNN+ H
Sbjct: 29 GLLNNLYHH 37


>sp|RPO1C_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus solfataricus (strain

Query: 1 TGLLNNIGTH 10
TG++ IG H
Sbjct: 320 TGIVRQIGRH 329


>sp|AGLP_HALVD|HEXURONIC acid methyltransferase AglP|Haloferax volcanii (strain ATCC 29605

Query: 5 NNIGTH 10
+NIGTH
Sbjct: 75 SNIGTH 80


>sp|RPO1C_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Sulfurisphaera tokodaii (strain DSM

Query: 1 TGLLNNIGTH 10
TG++ IG H
Sbjct: 320 TGVVRQIGRH 329


>sp|RPO1C_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus shibatae (strain ATCC

Query: 1 TGLLNNIGTH 10
TG++ IG H
Sbjct: 320 TGVVRQIGRH 329


>sp|RPO1C_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 TGLLNNIGTH 10
TG++ IG H
Sbjct: 320 TGVVRQIGRH 329


>sp|RPO1C_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 TGLLNNIGTH 10
TG++ IG H
Sbjct: 320 TGVVRQIGRH 329


>sp|RPO1C_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 TGLLNNIGTH 10
TG++ IG H
Sbjct: 320 TGVVRQIGRH 329


>sp|RPO1C_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 TGLLNNIGTH 10
TG++ IG H
Sbjct: 320 TGVVRQIGRH 329


>sp|RPO1C_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 TGLLNNIGTH 10
TG++ IG H
Sbjct: 320 TGVVRQIGRH 329


>sp|RPO1C_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 TGLLNNIGTH 10
TG++ IG H
Sbjct: 320 TGVVRQIGRH 329




144|Sequence|716|725|NIGTHVDPIL

>sp|PRIS_NITMS|DNA primase small subunit PriS|Nitrosopumilus maritimus (strain SCM1)

Query: 1 NIGTHVDP 8
NIGT +DP
Sbjct: 275 NIGTKIDP 282


>sp|Y987_METTH|UNCHARACTERIZED protein MTH_987|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 IGTHVDP 8
+GTH+DP
Sbjct: 251 VGTHLDP 257


>sp|PURO_HALWD|IMP cyclohydrolase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 GTHVDPI 9
G+HVDPI
Sbjct: 68 GSHVDPI 74


>sp|PURO_HALSA|IMP cyclohydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 3 GTHVDPI 9
G+HVDPI
Sbjct: 68 GSHVDPI 74


>sp|PURO_HALS3|IMP cyclohydrolase|Halobacterium salinarum (strain ATCC 29341

Query: 3 GTHVDPI 9
G+HVDPI
Sbjct: 68 GSHVDPI 74


>sp|COFC_HALTV|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloterrigena turkmenica (strain ATCC 51198

Query: 3 GTHVDPI 9
GTH+DP+
Sbjct: 97 GTHIDPV 103


>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IGTHVDP 8
IG HVDP
Sbjct: 541 IGEHVDP 547


>sp|PURO_HALMA|IMP cyclohydrolase|Haloarcula marismortui (strain ATCC 43049

Query: 3 GTHVDPI 9
G+HVDPI
Sbjct: 68 GSHVDPI 74


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 3 GTHVDPIL 10
GTH +P+L
Sbjct: 645 GTHTEPVL 652


>sp|THI4_METVS|THIAMINE thiazole synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 GTHVDPI 9
G HVDPI
Sbjct: 157 GLHVDPI 163


>sp|PURO_HALLT|IMP cyclohydrolase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 GTHVDPI 9
G+HVDPI
Sbjct: 73 GSHVDPI 79


>sp|THI4_PYRNV|THIAMINE thiazole synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 GTHVDPI 9
G+HVDP+
Sbjct: 150 GSHVDPL 156


>sp|BPS2_ACIAM|PROTEIN bps2|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 3 GTHVDP 8
G+HVDP
Sbjct: 296 GSHVDP 301


>sp|THI4_PYRIL|THIAMINE thiazole synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 GTHVDPI 9
G+HVDP+
Sbjct: 150 GSHVDPL 156


>sp|THI4_METIK|THIAMINE thiazole synthase|Methanotorris igneus (strain DSM 5666

Query: 3 GTHVDPI 9
G H+DPI
Sbjct: 157 GLHIDPI 163


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 2 IGTHVDP 8
+G HVDP
Sbjct: 571 MGAHVDP 577


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 2 IGTHVDP 8
+G HVDP
Sbjct: 571 MGAHVDP 577


>sp|THI4_SULAC|THIAMINE thiazole synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GTHVDPIL 10
G HVDP+
Sbjct: 160 GLHVDPVF 167


>sp|THI4_METTP|THIAMINE thiazole synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 GTHVDPI 9
G HVDP+
Sbjct: 152 GIHVDPL 158


>sp|THI4_ARCFU|THIAMINE thiazole synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GTHVDPIL 10
G HVDP+
Sbjct: 157 GLHVDPLF 164


>sp|THI4_PYRCJ|THIAMINE thiazole synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 GTHVDPI 9
G HVDP+
Sbjct: 150 GMHVDPL 156


>sp|THI4_METMP|THIAMINE thiazole synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GTHVDPI 9
G H+DPI
Sbjct: 157 GLHIDPI 163


>sp|THI4_THEKO|THIAMINE thiazole synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GTHVDPI 9
G HVDP+
Sbjct: 149 GLHVDPL 155


>sp|THI4_PYRHO|THIAMINE thiazole synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GTHVDPI 9
G HVDP+
Sbjct: 150 GLHVDPL 156


>sp|THI4_PYRFU|THIAMINE thiazole synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GTHVDPI 9
G HVDP+
Sbjct: 150 GLHVDPL 156


>sp|THI4_PYRAR|THIAMINE thiazole synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 GTHVDPI 9
G HVDP+
Sbjct: 150 GMHVDPL 156


>sp|THI4_PYRAB|THIAMINE thiazole synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 GTHVDPI 9
G HVDP+
Sbjct: 150 GLHVDPL 156


>sp|THI4_METMJ|THIAMINE thiazole synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 GTHVDPI 9
G HVDP+
Sbjct: 152 GLHVDPL 158


>sp|THI4_METTH|THIAMINE thiazole synthase|Methanothermobacter thermautotrophicus (strain

Query: 3 GTHVDPI 9
G HVDP+
Sbjct: 151 GLHVDPL 157


>sp|THI4_SULTO|THIAMINE thiazole synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GTHVDPIL 10
G HVDP+
Sbjct: 161 GLHVDPLF 168


>sp|PURO_NATPD|IMP cyclohydrolase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 GTHVDPI 9
GT VDPI
Sbjct: 69 GTQVDPI 75


>sp|IF2G_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 IGTHVDPIL 10
IGT++DP L
Sbjct: 297 IGTYLDPSL 305


>sp|PDAD1_ARCFU|PYRUVOYL-DEPENDENT arginine decarboxylase 1|Archaeoglobus fulgidus (strain ATCC

Query: 2 IGTHVDPIL 10
+G H DP++
Sbjct: 12 VGRHTDPLV 20


>sp|THI4_PYRAE|THIAMINE thiazole synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GTHVDPI 9
G HVDP+
Sbjct: 150 GMHVDPL 156


>sp|IF2G_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 IGTHVDPIL 10
IGT +DP L
Sbjct: 292 IGTKLDPFL 300


>sp|IF2G_METMA|TRANSLATION initiation factor 2 subunit|Methanosarcina mazei (strain ATCC

Query: 2 IGTHVDPIL 10
+GT++DP L
Sbjct: 314 VGTYLDPTL 322


>sp|THI4_METM7|THIAMINE thiazole synthase|Methanococcus maripaludis (strain C7 /

Query: 3 GTHVDPI 9
G H+DP+
Sbjct: 157 GLHIDPL 163


>sp|THI4_METM6|THIAMINE thiazole synthase|Methanococcus maripaludis (strain C6 /

Query: 3 GTHVDPI 9
G H+DP+
Sbjct: 157 GLHIDPL 163


>sp|THI4_METM5|THIAMINE thiazole synthase|Methanococcus maripaludis (strain C5 /

Query: 3 GTHVDPI 9
G H+DP+
Sbjct: 157 GLHIDPL 163


>sp|IF2G_METAC|TRANSLATION initiation factor 2 subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 IGTHVDPIL 10
+GT++DP L
Sbjct: 326 VGTYLDPTL 334


>sp|GLYA_HYPBU|SERINE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 3 GTHVDP 8
G HVDP
Sbjct: 93 GAHVDP 98


>sp|SYT_METAC|THREONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NIGTHVD 7
N+G H+D
Sbjct: 385 NVGIHID 391


>sp|CAS1B_METHJ|PUTATIVE CRISPR-associated endonuclease Cas1 2|Methanospirillum hungatei

Query: 2 IGTHVDP 8
IG H+DP
Sbjct: 202 IGGHLDP 208


>sp|THI4_METJA|THIAMINE thiazole synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GTHVDPI 9
G H+DP+
Sbjct: 162 GLHIDPL 168


>sp|IF2G_META3|TRANSLATION initiation factor 2 subunit|Methanococcus aeolicus (strain ATCC

Query: 2 IGTHVDPIL 10
IGT +DP L
Sbjct: 294 IGTELDPAL 302


>sp|DLDH_HALVD|DIHYDROLIPOYL dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 2 IGTHVDPIL 10
+G H DP++
Sbjct: 74 MGIHADPVV 82


>sp|IF2G_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 2 IGTHVDPIL 10
+GT +DP L
Sbjct: 292 VGTKLDPFL 300


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 IGTHVDPIL 10
IG H +P++
Sbjct: 875 IGWHAEPVM 883


>sp|IF2G_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IGTHVDPIL 10
IGT +DP L
Sbjct: 294 IGTKLDPYL 302


>sp|ARCS_METJA|ARCHAEOSINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NIGTHVDPI 9
N G HVD I
Sbjct: 101 NFGKHVDLI 109


>sp|FPOL_METMA|F(420)H(2) dehydrogenase subunit L|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NIGTHVDPI 9
NIG +DP+
Sbjct: 76 NIGILIDPL 84


>sp|THI4_META3|THIAMINE thiazole synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GTHVDPI 9
G H+DP+
Sbjct: 158 GLHIDPL 164


>sp|IF2G_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 IGTHVDPIL 10
+GT +DP L
Sbjct: 293 VGTKLDPFL 301


>sp|Y796_METKA|UPF0288 protein MK0796|Methanopyrus kandleri (strain AV19 /

Query: 4 THVDPIL 10
THV+P++
Sbjct: 169 THVEPVV 175


>sp|IF2G_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 NIGTHVDPIL 10
+GT +DP L
Sbjct: 293 GVGTKLDPYL 302


>sp|IF2G_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 2 IGTHVDPIL 10
+GT +DP L
Sbjct: 293 VGTKLDPYL 301




145|Sequence|721|730|VDPILLIHRI

>sp|Y2294_THEKO|UPF0128 protein TK2294|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DPILLIHR 9
DP L++HR
Sbjct: 109 DPRLILHR 116


>sp|Y505_METJA|UNCHARACTERIZED protein MJ0505|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PILLIHRI 10
PI+LIH +
Sbjct: 38 PIILIHDV 45


>sp|SPEE2_HYPBU|POLYAMINE aminopropyltransferase 2|Hyperthermus butylicus (strain DSM 5456

Query: 1 VDPILLIHR 9
V PILL H+
Sbjct: 71 VHPILLAHQ 79




146|Sequence|726|735|LIHRIKEGME

>sp|PHP_SACS2|ARYLDIALKYLPHOSPHATASE solfataricus (strain ATCC 35092

Query: 1 LIHRIKEGME 10
IH IKEG++
Sbjct: 118 FIHDIKEGIQ 127


>sp|NNRE_CENSY|NAD(P)H-HYDRATE epimerase|Cenarchaeum symbiosum (strain A)

Query: 3 HRIKEGM 9
HR+KEG+
Sbjct: 181 HRMKEGI 187


>sp|Y1412_METJA|UPF0288 protein MJ1412|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LIHRIKEGME 10
++ R+KEG+E
Sbjct: 282 VVGRVKEGIE 291


>sp|RL4_THEAC|LARGE ribosomal subunit protein uL4|Thermoplasma acidophilum (strain ATCC

Query: 3 HRIKEGME 10
HR KEG++
Sbjct: 133 HRFKEGLK 140


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 3 HRIKEGM 9
H+++EGM
Sbjct: 510 HQVREGM 516


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 1 LIHRIKEG 8
++H++KEG
Sbjct: 535 VLHKVKEG 542


>sp|RPO11_KORCO|DNA-DIRECTED RNA polymerase subunit Rpo11|Korarchaeum cryptofilum (strain

Query: 1 LIHRIKEGM 9
L R+KEGM
Sbjct: 55 LFLRVKEGM 63


>sp|NNR_METTH|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanothermobacter

Query: 3 HRIKEGME 10
HR+K+G++
Sbjct: 203 HRMKDGLK 210




147|Sequence|731|740|KEGMEIPNLR

>sp|RNZ_CENSY|RIBONUCLEASE Z|Cenarchaeum symbiosum (strain A)

Query: 2 EGMEIPNLR 10
EGM++P LR
Sbjct: 37 EGMQVPYLR 45


>sp|SECY_ARCFU|PROTEIN translocase subunit SecY|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KEGMEIPNLR 10
K GM++P R
Sbjct: 404 KSGMQVPGFR 413


>sp|SECY_SULAC|PROTEIN translocase subunit SecY|Sulfolobus acidocaldarius (strain ATCC

Query: 1 KEGMEIPNLR 10
+ G+EIP +R
Sbjct: 378 RSGIEIPGMR 387


>sp|MVHB_METTH|POLYFERREDOXIN protein MvhB|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 KEGMEIPN 8
KEGM++P+
Sbjct: 305 KEGMKVPD 312


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 1 KEGMEIPNLR 10
+ G+EI NLR
Sbjct: 91 RAGLEIANLR 100


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EGMEIPNLR 10
EGM IP R
Sbjct: 304 EGMSIPECR 312


>sp|LYSY_SULTO|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EGMEIPNLR 10
EG+ IP LR
Sbjct: 339 EGLRIPPLR 347


>sp|HIS6_METMJ|IMIDAZOLE glycerol phosphate synthase subunit|Methanoculleus marisnigri

Query: 1 KEGMEIPNLR 10
KEG +IP R
Sbjct: 196 KEGFDIPITR 205


>sp|LYSY_SULAC|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EGMEIPNLR 10
EG+ IP LR
Sbjct: 340 EGLRIPPLR 348


>sp|PYRI_METB6|ASPARTATE carbamoyltransferase regulatory chain|Methanoregula boonei (strain

Query: 1 KEGMEIPNL 9
K+G+EIP +
Sbjct: 106 KQGVEIPTV 114


>sp|ARADH_HALVD|L-ARABINOSE 1-dehydrogenase (NAD(P)(+))|Haloferax volcanii (strain ATCC 29605

Query: 1 KEGMEIPNLR 10
+ G+E+ NLR
Sbjct: 159 RHGLEVLNLR 168


>sp|RNP3_THEGJ|RIBONUCLEASE P protein component 3|Thermococcus gammatolerans (strain DSM 15229

Query: 3 GMEIPNLR 10
GMEIP R
Sbjct: 193 GMEIPEAR 200


>sp|RNP3_THEKO|RIBONUCLEASE P protein component 3|Thermococcus kodakarensis (strain ATCC

Query: 3 GMEIPNLR 10
GMEIP R
Sbjct: 199 GMEIPEAR 206


>sp|PYRI_METPE|ASPARTATE carbamoyltransferase regulatory chain|Methanosphaerula palustris

Query: 1 KEGMEIPN 8
K+G++IPN
Sbjct: 98 KKGVDIPN 105


>sp|RS6E_STAMF|SMALL ribosomal subunit protein eS6|Staphylothermus marinus (strain

Query: 1 KEGMEIPNLR 10
KEG E+P L+
Sbjct: 37 KEGFELPILK 46


>sp|SYE_METJA|GLUTAMATE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GMEIPNLR 10
G+E+PN++
Sbjct: 82 GLELPNVK 89


>sp|MTBB2_METBA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri

Query: 1 KEGMEIP 7
++GMEIP
Sbjct: 16 EQGMEIP 22


>sp|MTBB1_METBA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri

Query: 1 KEGMEIP 7
++GMEIP
Sbjct: 64 EQGMEIP 70


>sp|IF2P_SULTO|PROBABLE translation initiation factor IF-2|Sulfurisphaera tokodaii (strain

Query: 2 EGMEIPN 8
+G+E+PN
Sbjct: 425 QGIEVPN 431


>sp|Y2543_HALSA|PROTEIN VNG_2543C|Halobacterium salinarum (strain ATCC 700922

Query: 2 EGMEIPNLR 10
E E+PN+R
Sbjct: 105 EDAELPNIR 113


>sp|RFCL_THEKO|REPLICATION factor C large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 KEGMEIP 7
+EG+E+P
Sbjct: 173 REGLEVP 179


>sp|HIS6_THEKO|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus kodakarensis

Query: 1 KEGMEIPNLR 10
KEG +IP R
Sbjct: 179 KEGFDIPLTR 188




148|Sequence|736|745|IPNLRDSLVK

>sp|ACYP_AERPE|ACYLPHOSPHATASE pernix (strain ATCC 700893

Query: 1 IPNLRDSLVK 10
+P++RDSLV+
Sbjct: 4 VPSVRDSLVR 13


>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 1 IPNLRDSLVK 10
+P+LRDSL++
Sbjct: 393 VPSLRDSLLE 402


>sp|ORNAT_THEKO|ORNITHINE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PNLRDSLVK 10
P LRD +VK
Sbjct: 391 PELRDRIVK 399


>sp|TRM14_ARCFU|TRNA (guanine(6)-N2)-methyltransferase|Archaeoglobus fulgidus (strain

Query: 1 IPNLRD 6
+PNLRD
Sbjct: 244 VPNLRD 249


>sp|RS5_THEAC|SMALL ribosomal subunit protein uS5|Thermoplasma acidophilum (strain

Query: 1 IPNLRDSLV 9
+PNL+D ++
Sbjct: 43 LPNLKDEVI 51


>sp|AROE_METTP|SHIKIMATE dehydrogenase (NADP(+))|Methanothrix thermoacetophila (strain DSM

Query: 1 IPNLRDSLV 9
IP LRD+++
Sbjct: 40 IPRLRDAIL 48


>sp|Y1033_PYRAR|UPF0210 protein Pars_1033|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PNLRDSL 8
PNL+D+L
Sbjct: 37 PNLKDTL 43


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 2 PNLRDSLV 9
PN+RD+++
Sbjct: 983 PNIRDAIL 990


>sp|EF2_THEAC|ELONGATION factor 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PNLRDSLVK 10
P L+DS+V+
Sbjct: 703 PELQDSIVR 711


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 2 PNLRDSLV 9
PN+RD+++
Sbjct: 986 PNIRDAIL 993


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 3 NLRDSLVK 10
+LRD+LVK
Sbjct: 1026 SLRDALVK 1033




149|Sequence|741|750|DSLVKILQDY

>sp|RNH2_PYRAB|RIBONUCLEASE HII|Pyrococcus abyssi (strain GE5 /

Query: 1 DSLVKILQDY 10
D +VK+L DY
Sbjct: 54 DEIVKVLDDY 63


>sp|RL10_THESM|LARGE ribosomal subunit protein uL10|Thermococcus sibiricus (strain DSM

Query: 1 DSLVKILQDY 10
+ L K+LQDY
Sbjct: 13 EELTKLLQDY 22


>sp|FRHG_METBF|COENZYME F420 hydrogenase subunit gamma|Methanosarcina barkeri (strain

Query: 3 LVKILQDY 10
L+KIL DY
Sbjct: 29 LIKILDDY 36


>sp|MPTA_METST|GTP cyclohydrolase MptA|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DSLVKILQD 9
D L+KI+QD
Sbjct: 220 DDLIKIIQD 228


>sp|GGGPS_SULTO|GERANYLGERANYLGLYCERYL phosphate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DSLVKILQDY 10
DS+++IL+D+
Sbjct: 59 DSIIEILEDF 68


>sp|GGGPS_METS5|GERANYLGERANYLGLYCERYL phosphate synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 DSLVKILQDY 10
DS++ +LQD+
Sbjct: 66 DSILSVLQDF 75


>sp|PORC_METTM|PYRUVATE synthase subunit PorC|Methanothermobacter marburgensis (strain ATCC

Query: 1 DSLVKILQD 9
DSL+KI+++
Sbjct: 144 DSLIKIIKE 152


>sp|PORC_METTH|PYRUVATE synthase subunit PorC|Methanothermobacter thermautotrophicus

Query: 1 DSLVKILQD 9
DSL+KI+++
Sbjct: 144 DSLIKIIKE 152


>sp|SYW_PYRAB|TRYPTOPHAN--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 5 KILQDY 10
K+LQDY
Sbjct: 63 KVLQDY 68


>sp|SECY_ARCFU|PROTEIN translocase subunit SecY|Archaeoglobus fulgidus (strain ATCC

Query: 1 DSLVKILQDY 10
DS+++ LQ Y
Sbjct: 2 DSVIRALQPY 11


>sp|IDI2_THESM|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus sibiricus (strain DSM 12597

Query: 1 DSLVKILQDY 10
+ ++KILQ Y
Sbjct: 316 EGVIKILQQY 325


>sp|SYW_THEON|TRYPTOPHAN--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 5 KILQDY 10
K+LQDY
Sbjct: 62 KVLQDY 67




150|Sequence|746|755|ILQDYNLQIL

>sp|TRPB1_METAC|TRYPTOPHAN synthase beta chain 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ILQDYNLQIL 10
ILQD N QIL
Sbjct: 296 ILQDKNGQIL 305


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 1 ILQDYNLQIL 10
+LQ YN+++L
Sbjct: 105 VLQKYNVKVL 114


>sp|TRPB1_METMA|TRYPTOPHAN synthase beta chain 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ILQDYNLQIL 10
+LQD N QIL
Sbjct: 296 VLQDKNGQIL 305


>sp|RFCL_SACI1|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 ILQDYNLQIL 10
+ DYNL++L
Sbjct: 60 VAHDYNLELL 69


>sp|RL6_PYRHO|LARGE ribosomal subunit protein uL6|Pyrococcus horikoshii (strain ATCC

Query: 2 LQDYNLQI 9
+QDYN+++
Sbjct: 21 VQDYNVKV 28


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILQDYNL 7
IL+DYNL
Sbjct: 466 ILKDYNL 472


>sp|GMS_METOI|GMGT synthase|Methanothermococcus okinawensis (strain DSM 14208

Query: 3 QDYNLQI 9
+DYN+Q+
Sbjct: 183 KDYNMQV 189


>sp|RFCL_SACI4|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 1 ILQDYNLQIL 10
+ DYNL++L
Sbjct: 60 LAHDYNLELL 69


>sp|RFCL_SACI3|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.27)

Query: 1 ILQDYNLQIL 10
+ DYNL++L
Sbjct: 60 LAHDYNLELL 69


>sp|RFCL_SACI7|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 ILQDYNLQIL 10
+ DYNL++L
Sbjct: 60 LAHDYNLELL 69


>sp|RFCL_SACI6|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 1 ILQDYNLQIL 10
+ DYNL++L
Sbjct: 60 LAHDYNLELL 69


>sp|RFCL_SACI2|REPLICATION factor C large subunit|Saccharolobus islandicus (strain L.S.2.15

Query: 1 ILQDYNLQIL 10
+ DYNL++L
Sbjct: 60 LAHDYNLELL 69




151|Sequence|751|760|NLQILLREGC

>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 1 NLQILLREG 9
NLQI +R+G
Sbjct: 811 NLQIAVRDG 819


>sp|KPTA_THEON|PROBABLE RNA 2'-phosphotransferase|Thermococcus onnurineus (strain NA1)

Query: 1 NLQILLREG 9
NL+ +LREG
Sbjct: 104 NLESILREG 112


>sp|Y34A_METJA|UNCHARACTERIZED protein MJ0347.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LQILLREGC 10
LQI L+E C
Sbjct: 91 LQIFLKECC 99


>sp|TYW3_METJA|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 NLQILLREG 9
NL++ +REG
Sbjct: 13 NLELAIREG 21


>sp|Y1141_METJA|UNCHARACTERIZED protein MJ1141|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QILLREGC 10
Q LLR+GC
Sbjct: 190 QPLLRDGC 197




152|Sequence|756|765|LREGCKKILV

>sp|SYT_CENSY|THREONINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 REGCKKILV 10
R GCKK+L+
Sbjct: 64 RIGCKKLLI 72


>sp|MRE11_METAC|DNA double-strand break repair protein|Methanosarcina acetivorans

Query: 1 LREGCKKILV 10
L E CKK+LV
Sbjct: 147 LPENCKKLLV 156


>sp|DPO4_METMJ|DNA polymerase IV|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 REGCKKI 8
REGCK I
Sbjct: 243 REGCKSI 249


>sp|GUAAA_METHJ|GMP synthase [glutamine-hydrolyzing] subunit A|Methanospirillum

Query: 1 LREGCKKILV 10
+REGC+ I++
Sbjct: 40 VREGCQGIIL 49


>sp|PTH_METJA|PEPTIDYL-TRNA hydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LREGCKKILV 10
LREG KK++V
Sbjct: 45 LREGQKKVVV 54


>sp|MRE11_METMA|DNA double-strand break repair protein|Methanosarcina mazei (strain

Query: 1 LREGCKKILV 10
L E C+K+LV
Sbjct: 147 LPENCRKLLV 156


>sp|GGPS_SULAC|GERANYLGERANYL diphosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LREGCKKILV 10
+REG K ILV
Sbjct: 236 IREGKKTILV 245


>sp|GGPS_SACS2|GERANYLGERANYL diphosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LREGCKKILV 10
+REG K ILV
Sbjct: 238 IREGKKTILV 247


>sp|SYT_NITMS|THREONINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 GCKKILV 10
GCKK+L+
Sbjct: 68 GCKKLLL 74


>sp|ARLY_METBF|ARGININOSUCCINATE lyase|Methanosarcina barkeri (strain Fusaro /

Query: 2 REGCKKIL 9
RE C KIL
Sbjct: 54 REDCSKIL 61


>sp|PTH_PYRFU|PEPTIDYL-TRNA hydrolase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LREGCKKILV 10
REG KK++V
Sbjct: 49 FREGQKKVVV 58


>sp|CARA_METMA|CARBAMOYL phosphate synthase small chain|Methanosarcina mazei (strain ATCC

Query: 1 LREGCKK 7
+RE CKK
Sbjct: 80 VREACKK 86


>sp|CARA_METAC|CARBAMOYL phosphate synthase small chain|Methanosarcina acetivorans (strain

Query: 1 LREGCKK 7
+RE CKK
Sbjct: 80 VREACKK 86


>sp|ARLY_METBU|ARGININOSUCCINATE lyase|Methanococcoides burtonii (strain DSM 6242

Query: 3 EGCKKIL 9
E CKKIL
Sbjct: 55 EDCKKIL 61


>sp|PRDPP_METMA|PRENYL-DIPHOSPHATE phosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LREGCKKIL 9
+EGC+K L
Sbjct: 161 FKEGCEKYL 169


>sp|RFRNP_METVS|RNA-FREE ribonuclease P|Methanococcus vannielii (strain ATCC 35089

Query: 2 REGCKKILV 10
REGCK ++
Sbjct: 66 REGCKNEII 74


>sp|Y1062_METJA|UNCHARACTERIZED protein MJ1062|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LREGCKKIL 9
+RE CKK++
Sbjct: 93 IRELCKKLI 101


>sp|DPOL_THES9|DNA polymerase|Thermococcus sp. (strain 9oN-7)

Query: 2 REGCKKILV 10
REGCK+ V
Sbjct: 425 REGCKEYDV 433


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 REGCKKILV 10
REGCK+ V
Sbjct: 785 REGCKEYDV 793


>sp|Y1679_METJA|UNCHARACTERIZED protein MJ1679|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 REGCKKI 8
RE CKKI
Sbjct: 53 REECKKI 59


>sp|PTH_METKA|PEPTIDYL-TRNA hydrolase|Methanopyrus kandleri (strain AV19 /

Query: 1 LREGCKKILV 10
LREG KK+++
Sbjct: 45 LREGQKKVVL 54


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 2 REGCKKILV 10
REGCK+ V
Sbjct: 425 REGCKEYDV 433


>sp|SECY_METJA|PROTEIN translocase subunit SecY|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LREGCKKIL 9
L +GC+K+L
Sbjct: 106 LFQGCQKLL 114


>sp|HYPA_THEON|HYDROGENASE maturation factor HypA|Thermococcus onnurineus (strain NA1)

Query: 2 REGCKKILV 10
REG KK+L
Sbjct: 20 REGAKKLLA 28


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 2 REGCKK 7
REGCK+
Sbjct: 392 REGCKE 397


>sp|PUR1_METJA|AMIDOPHOSPHORIBOSYLTRANSFERASE jannaschii (strain ATCC 43067

Query: 1 LREGCKKIL 9
LR GC KI+
Sbjct: 390 LRIGCPKII 398


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 2 REGCKKILV 10
REGCK V
Sbjct: 788 REGCKNYDV 796




153|Sequence|761|770|KKILVADSLS

>sp|RS24_METM5|SMALL ribosomal subunit protein eS24|Methanococcus maripaludis (strain

Query: 1 KKILVADSL 9
KK+LV D+L
Sbjct: 47 KKVLVVDTL 55


>sp|RS24_METM7|SMALL ribosomal subunit protein eS24|Methanococcus maripaludis (strain

Query: 1 KKILVADSL 9
KK+LV D+L
Sbjct: 47 KKVLVVDTL 55


>sp|RS24_METM6|SMALL ribosomal subunit protein eS24|Methanococcus maripaludis (strain

Query: 1 KKILVADSL 9
KK+LV D+L
Sbjct: 47 KKVLVVDTL 55




154|Sequence|766|775|ADSLSLLKKM

>sp|TRPB_PYRIL|TRYPTOPHAN synthase beta chain|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ADSLSLLKKM 10
A SLSLLK++
Sbjct: 329 APSLSLLKRL 338


>sp|TRPB_PYRAR|TRYPTOPHAN synthase beta chain|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ADSLSLLKKM 10
A SLSLL+K+
Sbjct: 329 APSLSLLRKL 338


>sp|TRPB_PYRAE|TRYPTOPHAN synthase beta chain|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ADSLSLLKKM 10
A SLSLL+K+
Sbjct: 329 APSLSLLRKL 338


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DSLSLLKKM 10
D SLLKKM
Sbjct: 468 DMSSLLKKM 476




155|Sequence|771|780|LLKKMHRTQM

>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLKKMHRTQ 9
+LKK+H Q
Sbjct: 289 ILKKLHNKQ 297




156|Sequence|776|785|HRTQMKGVLV

>sp|Y663_PYRAB|PROBABLE S-adenosyl-L-methionine-binding protein PYRAB06630|Pyrococcus

Query: 1 HRTQMKGVLV 10
HR + KG+LV
Sbjct: 65 HRAKFKGLLV 74


>sp|SUI1_METBU|PROTEIN translation factor SUI1 homolog|Methanococcoides burtonii (strain

Query: 1 HRTQMKGVLV 10
H ++MK VLV
Sbjct: 82 HLSRMKAVLV 91




157|Sequence|781|790|KGVLVDEENI

>sp|FLAE_METJA|PUTATIVE flagella-related protein E|Methanocaldococcus jannaschii (strain

Query: 1 KGVLVDEENI 10
KG+ VDEEN+
Sbjct: 79 KGIKVDEENV 88


>sp|THS_METMP|CHAPERONIN subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 KGVLVDEENI 10
KGVLVD+E +
Sbjct: 210 KGVLVDKERV 219


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 VDEENI 10
VDEENI
Sbjct: 45 VDEENI 50


>sp|PFDA_PYRHO|PREFOLDIN subunit alpha|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KGVLVDEEN 9
KGV+VD+ N
Sbjct: 70 KGVIVDKNN 78


>sp|TRUD1_METJA|PROBABLE tRNA pseudouridine synthase D|Methanocaldococcus jannaschii (strain

Query: 4 LVDEEN 9
LVDEEN
Sbjct: 221 LVDEEN 226


>sp|THYX_PYRFU|FLAVIN-DEPENDENT thymidylate synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VLVDEENI 10
+++DEEN+
Sbjct: 94 IVLDEENV 101


>sp|Y1024_METJA|UNCHARACTERIZED protein MJ1024|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GVLVDEENI 10
GVL+ EEN+
Sbjct: 383 GVLLYEENL 391


>sp|GLYA_METS3|SERINE hydroxymethyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 KGVLVDEENI 10
K V VD+ENI
Sbjct: 384 KRVAVDKENI 393


>sp|RNH2_PYRFU|RIBONUCLEASE HII|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VLVDEENI 10
V+VDE+NI
Sbjct: 23 VVVDEKNI 30


>sp|THS_METTL|CHAPERONIN subunit|Methanothermococcus thermolithotrophicus

Query: 2 GVLVDEENI 10
GVL+D+E +
Sbjct: 213 GVLIDKERV 221




158|Sequence|786|795|DEENICESCL

>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 2 EENICESCL 10
E+N CE CL
Sbjct: 23 EKNPCEGCL 31


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DEENICESCL 10
DEE +C CL
Sbjct: 473 DEEPLCPMCL 482


>sp|PRIS_METM6|DNA primase small subunit PriS|Methanococcus maripaludis (strain C6 /

Query: 1 DEENICESCL 10
D+ ICE CL
Sbjct: 117 DDSWICEECL 126


>sp|PRIS_METM5|DNA primase small subunit PriS|Methanococcus maripaludis (strain C5 /

Query: 1 DEENICESCL 10
D+ ICE CL
Sbjct: 117 DDSWICEECL 126


>sp|PRIS_METMP|DNA primase small subunit PriS|Methanococcus maripaludis (strain DSM

Query: 1 DEENICESCL 10
D+ ICE CL
Sbjct: 117 DDSWICEECL 126


>sp|PRIS_METM7|DNA primase small subunit PriS|Methanococcus maripaludis (strain C7 /

Query: 1 DEENICESCL 10
D+ ICE CL
Sbjct: 117 DDSWICEECL 126


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 NICESCL 10
++CESCL
Sbjct: 32 SVCESCL 38


>sp|AMZA_HALWD|ARCHAEMETZINCIN walsbyi (strain DSM 16790

Query: 2 EENICESC 9
EEN+C SC
Sbjct: 161 EENLCGSC 168


>sp|AMZA_NATPD|ARCHAEMETZINCIN pharaonis (strain ATCC 35678

Query: 2 EENICESC 9
EEN+C SC
Sbjct: 161 EENLCGSC 168


>sp|AMZA_HALSA|ARCHAEMETZINCIN salinarum (strain ATCC 700922

Query: 2 EENICESC 9
EEN+C SC
Sbjct: 161 EENLCGSC 168


>sp|AMZA_HALS3|ARCHAEMETZINCIN salinarum (strain ATCC 29341

Query: 2 EENICESC 9
EEN+C SC
Sbjct: 161 EENLCGSC 168


>sp|RRP42_METAC|EXOSOME complex component Rrp42|Methanosarcina acetivorans (strain ATCC

Query: 1 DEENICESCL 10
DEE +CE+ L
Sbjct: 205 DEEAVCETKL 214


>sp|PRIS_METST|DNA primase small subunit PriS|Methanosphaera stadtmanae (strain ATCC

Query: 2 EENICESCL 10
E +CE CL
Sbjct: 112 EGEVCEKCL 120


>sp|RRP42_METMA|EXOSOME complex component Rrp42|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DEENICESCL 10
DEE +CE+ L
Sbjct: 205 DEEAVCETKL 214


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 NICESC 9
NIC SC
Sbjct: 19 NICSSC 24


>sp|IDI2_METTP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DEENICESC 9
DE ++C C
Sbjct: 40 DESDVCTEC 48


>sp|KAD_METBU|ADENYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 2 EENICESC 9
+EN+C++C
Sbjct: 145 KENVCDAC 152


>sp|AMZA_PYRHO|ARCHAEMETZINCIN horikoshii (strain ATCC 700860

Query: 6 CESCL 10
CESCL
Sbjct: 172 CESCL 176


>sp|SYA_SULAC|ALANINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EENICESC 9
E IC SC
Sbjct: 20 ERKICRSC 27


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 ENICESCL 10
+N CE CL
Sbjct: 24 KNPCEGCL 31


>sp|RL34_THESM|LARGE ribosomal subunit protein eL34|Thermococcus sibiricus (strain DSM

Query: 4 NICESCL 10
N+C SC+
Sbjct: 70 NLCPSCM 76


>sp|RL34_THEON|LARGE ribosomal subunit protein eL34|Thermococcus onnurineus (strain

Query: 4 NICESCL 10
N+C SC+
Sbjct: 70 NLCPSCM 76


>sp|RL34_THEKO|LARGE ribosomal subunit protein eL34|Thermococcus kodakarensis (strain

Query: 4 NICESCL 10
N+C SC+
Sbjct: 70 NLCPSCM 76


>sp|RL34_THEGJ|LARGE ribosomal subunit protein eL34|Thermococcus gammatolerans (strain

Query: 4 NICESCL 10
N+C SC+
Sbjct: 70 NLCPSCM 76


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 EENICESC 9
E +C+SC
Sbjct: 17 ERKVCKSC 24


>sp|SURE_METS3|5'-NUCLEOTIDASE SurE|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 ENICESCL 10
E++CE C+
Sbjct: 24 EDLCEVCV 31


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 NICESCL 10
N CE CL
Sbjct: 25 NPCEECL 31


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 ICESC 9
+CESC
Sbjct: 21 VCESC 25


>sp|IF2G_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain

Query: 5 ICESC 9
+CESC
Sbjct: 58 VCESC 62


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 5 ICESCL 10
ICE CL
Sbjct: 84 ICERCL 89


>sp|QUEC_METTH|7-CYANO-7-DEAZAGUANINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 ICESCL 10
+CESC+
Sbjct: 198 VCESCM 203


>sp|PUR1_PYRAB|AMIDOPHOSPHORIBOSYLTRANSFERASE abyssi (strain GE5 /

Query: 3 ENICESCL 10
+N+C +CL
Sbjct: 429 KNLCMACL 436


>sp|PUS10_PYRAR|TRNA pseudouridine synthase Pus10|Pyrobaculum arsenaticum (strain DSM

Query: 5 ICESCL 10
+C+SCL
Sbjct: 16 LCDSCL 21


>sp|Y857_METTH|PROTEIN MTH_857|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 EENICESCL 10
EE +C +C+
Sbjct: 156 EEFLCNTCM 164


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 DEENICESC 9
+ ++CESC
Sbjct: 683 NTSSVCESC 691


>sp|TF2B2_HALVD|TRANSCRIPTION initiation factor IIB 2|Haloferax volcanii (strain ATCC 29605

Query: 3 ENICESC 9
E ICE C
Sbjct: 52 ETICEDC 58


>sp|MCH_METM5|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C5 /

Query: 1 DEENICES 8
D EN+C+S
Sbjct: 249 DIENLCKS 256


>sp|MCH_METMJ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 ENICESC 9
ENI E+C
Sbjct: 151 ENIAEAC 157


>sp|MCH_METMP|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DEENICES 8
D EN+C+S
Sbjct: 249 DIENLCKS 256


>sp|NOB1_METJA|ENDORIBONUCLEASE Nob1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EENICESC 9
EE+ICE C
Sbjct: 170 EEDICEIC 177


>sp|HDRA_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 2 EENICESC 9
+ENIC C
Sbjct: 241 DENICTGC 248


>sp|TF2B_META3|TRANSCRIPTION initiation factor IIB|Methanococcus aeolicus (strain ATCC

Query: 1 DEENICESC 9
DEE +C C
Sbjct: 33 DEELVCPMC 41


>sp|PRIL_METBU|DNA primase large subunit PriL|Methanococcoides burtonii (strain DSM

Query: 3 ENICESCL 10
+ ICE+C+
Sbjct: 197 KEICEACI 204


>sp|GMS_METOI|GMGT synthase|Methanothermococcus okinawensis (strain DSM 14208

Query: 1 DEENICESCL 10
D+ IC SC+
Sbjct: 424 DKLKICGSCM 433


>sp|PRIS_METS3|DNA primase small subunit PriS|Methanobrevibacter smithii (strain ATCC

Query: 3 ENICESCL 10
+ +CE CL
Sbjct: 108 DGVCEVCL 115




159|Sequence|791|800|CESCLSPILP

>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CESCLSPIL 9
C++C SPIL
Sbjct: 645 CDACKSPIL 653


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 CESCLS-PIL 9
CE CLS PIL
Sbjct: 27 CEGCLSEPIL 36


>sp|RNP4_AERPE|RIBONUCLEASE P protein component 4|Aeropyrum pernix (strain ATCC 700893

Query: 1 CESCLSPILP 10
C++C +P++P
Sbjct: 66 CKNCRTPLIP 75


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 1 CESCLSP 7
CE CL+P
Sbjct: 532 CEKCLTP 538


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 CESCLSPILP 10
C L+PI+P
Sbjct: 746 CSKVLAPIVP 755


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 CESCLSP 7
CES LSP
Sbjct: 746 CESVLSP 752


>sp|TOP6B_HALSA|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 700922

Query: 3 SCLSPI 8
SCLSPI
Sbjct: 508 SCLSPI 513


>sp|TOP6B_HALS3|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 29341

Query: 3 SCLSPI 8
SCLSPI
Sbjct: 508 SCLSPI 513


>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 1 CESCLSPILP 10
C++C S LP
Sbjct: 454 CQACASHALP 463


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 1 CESCLS-PI 8
CE CLS PI
Sbjct: 27 CEGCLSEPI 35


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 CESCL 5
CESCL
Sbjct: 34 CESCL 38


>sp|AMZA_PYRHO|ARCHAEMETZINCIN horikoshii (strain ATCC 700860

Query: 1 CESCL 5
CESCL
Sbjct: 172 CESCL 176


>sp|FAU1_THEPD|PROBABLE ribonuclease FAU-1|Thermofilum pendens (strain DSM 2475

Query: 1 CESCLS 6
CE CLS
Sbjct: 289 CEKCLS 294


>sp|AGO_METJA|PROTEIN argonaute|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CESCLSPILP 10
CE L P P
Sbjct: 241 CEEILEPFAP 250


>sp|Y476_PYRFU|PROTEIN PF0476|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CESCLSPI 8
CE CL I
Sbjct: 93 CEKCLEEI 100


>sp|SPSS_METMJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 CESCLSP 7
C++C SP
Sbjct: 46 CDNCRSP 52


>sp|NOB1_METJA|ENDORIBONUCLEASE Nob1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CESCLSPI 8
CE C SP+
Sbjct: 174 CEICGSPL 181


>sp|Y416_METJA|DOUBLE zinc ribbon protein MJ0416|Methanocaldococcus jannaschii (strain

Query: 1 CESCLSPI 8
C SC SPI
Sbjct: 101 CNSCKSPI 108


>sp|Y1947_ARCFU|UNCHARACTERIZED protein AF_1947|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CESCLSPILP 10
C+SCL +LP
Sbjct: 89 CKSCLVCVLP 98




160|Sequence|796|805|SPILPSDAAK

>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 2 PILPSDAAK 10
P+ PSDAAK
Sbjct: 140 PVPPSDAAK 148


>sp|GLME_HALMA|GLUTAMATE mutase epsilon subunit|Haloarcula marismortui (strain ATCC 43049

Query: 2 PILPSDAAK 10
P PSDAAK
Sbjct: 398 PFAPSDAAK 406


>sp|HIS8_METPE|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 PILPSDA 8
P+LPS+A
Sbjct: 285 PVLPSEA 291


>sp|TRPF_AERPE|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PILPSDAA 9
P+LPS AA
Sbjct: 82 PLLPSSAA 89




161|Sequence|801|810|SDAAKPFSVV

>sp|COBQ_THEKO|PROBABLE cobyric acid synthase|Thermococcus kodakarensis (strain ATCC

Query: 1 SDAAKPFSVV 10
S + KPFSV+
Sbjct: 391 STSEKPFSVI 400


>sp|COFC_ARCFU|2-PHOSPHO-L-LACTATE guanylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DAAKPFSVV 10
DAAKPF +
Sbjct: 38 DAAKPFGEI 46


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SDAAKPFSV 9
+DA +PFSV
Sbjct: 112 TDAFQPFSV 120


>sp|PRIS_METAC|DNA primase small subunit PriS|Methanosarcina acetivorans (strain ATCC

Query: 3 AAKPFSV 9
A+KPFSV
Sbjct: 366 ASKPFSV 372


>sp|DHQS_METVS|3-DEHYDROQUINATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 SDAAKPFSVV 10
SD KP SVV
Sbjct: 322 SDEGKPISVV 331


>sp|WTPB_METJA|MOLYBDATE/TUNGSTATE transport system permease protein|Methanocaldococcus jannaschii

Query: 2 DAAKPFSV 9
DA+KP SV
Sbjct: 220 DASKPISV 227


>sp|AMPD_PYRHO|ANHYDROMEVALONATE phosphate decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 KPFSVV 10
KPFSVV
Sbjct: 85 KPFSVV 90




162|Sequence|806|815|PFSVVVFHCR

***** No hits found ******


163|Sequence|811|820|VFHCRHMFHK

>sp|PUR2_METAR|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 FHCRH 6
FHCRH
Sbjct: 409 FHCRH 413


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 3 HCRHMFH 9
H RHM H
Sbjct: 112 HARHMLH 118


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 3 HCRHMFHK 10
H R ++HK
Sbjct: 1117 HVRELYHK 1124


>sp|TRMY_PYRHO|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus horikoshii

Query: 2 FHCRHMFHK 10
FH H F K
Sbjct: 40 FHLSHSFRK 48


>sp|TRMY_PYRAB|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus abyssi

Query: 2 FHCRHMFHK 10
FH H F K
Sbjct: 40 FHLSHSFRK 48




164|Sequence|816|825|HMFHKECLPM

>sp|GLYA_METKA|SERINE hydroxymethyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 HMFHKECLPM 10
H + K+CLPM
Sbjct: 18 HEWLKKCLPM 27


>sp|NADA_PYRHO|QUINOLINATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 MFHKECLP 9
M H EC+P
Sbjct: 194 MIHPECIP 201


>sp|NADA_PYRAB|QUINOLINATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 MFHKECLP 9
M H EC+P
Sbjct: 194 MVHPECIP 201




165|Sequence|821|830|ECLPMPSMNS

>sp|ENO_METMA|ENOLASE mazei (strain ATCC BAA-159

Query: 3 LPMPSMN 9
LP+P+MN
Sbjct: 152 LPVPTMN 158


>sp|ENO_METBU|ENOLASE burtonii (strain DSM 6242

Query: 3 LPMPSMN 9
LP+P+MN
Sbjct: 149 LPVPTMN 155


>sp|ENO_METBF|ENOLASE barkeri (strain Fusaro /

Query: 3 LPMPSMN 9
LP+P+MN
Sbjct: 152 LPVPTMN 158


>sp|ENO_METAC|ENOLASE acetivorans (strain ATCC 35395

Query: 3 LPMPSMN 9
LP+P+MN
Sbjct: 153 LPVPTMN 159


>sp|ENO_METTP|ENOLASE thermoacetophila (strain DSM 6194

Query: 3 LPMPSMN 9
LP+PS+N
Sbjct: 141 LPVPSLN 147


>sp|RBLL_ARCFU|RIBULOSE bisphosphate carboxylase-like protein|Archaeoglobus fulgidus

Query: 2 CLPMPS 7
C PMPS
Sbjct: 359 CFPMPS 364




166|Sequence|826|835|PSMNSAAQFC

>sp|Y2165_ARCFU|UNCHARACTERIZED protein AF_2165|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 NSAAQFC 10
NSAA FC
Sbjct: 228 NSAAWFC 234




167|Sequence|831|840|AAQFCNICSA

>sp|Y1658_METJA|UNCHARACTERIZED protein MJ1658|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QFCNIC 8
+FCNIC
Sbjct: 96 EFCNIC 101


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus

Query: 4 FCNICS 9
FCN+C+
Sbjct: 67 FCNLCT 72


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 4 FCNICS 9
+CNICS
Sbjct: 54 WCNICS 59


>sp|THIC_NATPD|PHOSPHOMETHYLPYRIMIDINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 AQFCNIC 8
A+FC++C
Sbjct: 405 ARFCSMC 411


>sp|THIC_HALSA|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 AQFCNIC 8
A+FC++C
Sbjct: 405 ARFCSMC 411


>sp|THIC_HALS3|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 AQFCNIC 8
A+FC++C
Sbjct: 405 ARFCSMC 411


>sp|THIC_HALMA|PHOSPHOMETHYLPYRIMIDINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 AQFCNIC 8
A+FC++C
Sbjct: 404 ARFCSMC 410


>sp|TF2B2_THEVO|TRANSCRIPTION initiation factor IIB 2|Thermoplasma volcanium (strain ATCC 51530

Query: 2 AQFCN 6
AQFCN
Sbjct: 227 AQFCN 231


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain

Query: 4 FCNICSA 10
C ICSA
Sbjct: 12 LCGICSA 18


>sp|FRHA_METVO|COENZYME F420 hydrogenase subunit alpha|Methanococcus voltae

Query: 2 AQFCNIC 8
++FC IC
Sbjct: 60 SRFCGIC 66


>sp|MOAA_METMP|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain DSM 14266

Query: 3 QFCNICS 9
+FCN C+
Sbjct: 241 EFCNHCT 247


>sp|Y2181_ARCFU|UNCHARACTERIZED protein AF_2181|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AQFCNICS 9
+++CN CS
Sbjct: 188 SRYCNYCS 195


>sp|MBHLA_PYRFU|MEMBRANE-BOUND hydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AAQFCNICS 9
A + C ICS
Sbjct: 64 AERMCGICS 72




168|Sequence|836|845|NICSAKNRGP

>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 1 NICSAKNRGP 10
++ +KNRGP
Sbjct: 147 HLLDSKNRGP 156


>sp|MTTB_METBU|TRIMETHYLAMINE methyltransferase MttB|Methanococcoides burtonii (strain DSM 6242

Query: 1 NICSAKNR 8
N+C+ +NR
Sbjct: 5 NLCAGRNR 12


>sp|YPZ5_METTF|UNCHARACTERIZED protein ORF5'|Methanothermobacter thermautotrophicus

Query: 2 ICSAKNRGP 10
+C KN GP
Sbjct: 284 VCRVKNNGP 292


>sp|GUAAA_METHJ|GMP synthase [glutamine-hydrolyzing] subunit A|Methanospirillum

Query: 1 NICSAKNRG 9
+IC+ +N+G
Sbjct: 180 SICTGQNKG 188


>sp|IF2A_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 ICSAKNRGP 10
+CS NR P
Sbjct: 108 VCSRLNRNP 116


>sp|KHSE_THEVO|HOMOSERINE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 CSAKNRGP 10
CS+ N GP
Sbjct: 12 CSSANLGP 19


>sp|AATE3_METHJ|A-TYPE ATP synthase subunit E|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 SAKNRGP 10
SAKN GP
Sbjct: 113 SAKNLGP 119


>sp|RL15E_DESA1|LARGE ribosomal subunit protein eL15|Desulfurococcus amylolyticus (strain

Query: 2 ICSAKNRG 9
IC +NRG
Sbjct: 150 ICEPQNRG 157




169|Sequence|841|854|KNRGPGSAILEMKK

>sp|NARH_HALMT|RESPIRATORY nitrate reductase subunit beta|Haloferax mediterranei (strain ATCC

Query: 2 NRGPGSAILEM 12
NRG GS +L+M
Sbjct: 324 NRGGGSELLDM 334


>sp|HTPX_PYRAB|PROTEASE HtpX homolog|Pyrococcus abyssi (strain GE5 /

Query: 3 RGPGSAIL 10
RGPG+A++
Sbjct: 105 RGPGNAVV 112


>sp|YPZ5_METTF|UNCHARACTERIZED protein ORF5'|Methanothermobacter thermautotrophicus

Query: 1 KNRGPGSA 8
KNRGP +A
Sbjct: 168 KNRGPHAA 175


>sp|ARGB_METBF|ACETYLGLUTAMATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KNRGPGSAILEMKK 14
KNR S I+E+K+
Sbjct: 15 KNRFSDSYIMELKR 28


>sp|SYY_PYRIL|TYROSINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 RGPGSAILEMKK 14
+GPG+ +LE K
Sbjct: 355 QGPGAKLLEEMK 366


>sp|PYRB_METTP|ASPARTATE carbamoyltransferase catalytic subunit|Methanothrix

Query: 3 RGPGSAILEMK 13
RG GS ILE K
Sbjct: 33 RGKGSDILEGK 43


>sp|YPV5B_METTF|UNCHARACTERIZED protein ORF5B|Methanothermobacter thermautotrophicus

Query: 1 KNRGPGSA 8
KNRGP A
Sbjct: 120 KNRGPHDA 127


>sp|TIAS_SACI2|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Saccharolobus islandicus

Query: 3 RGPGSAILEMKK 14
R PG AI+E K
Sbjct: 96 RRPGIAIIEYDK 107


>sp|RFCL_HALLT|REPLICATION factor C large subunit|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 NRGPGSAILEMKK 14
+RG SAI E+ K
Sbjct: 125 DRGGASAITELVK 137


>sp|SYY_PYRAR|TYROSINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 RGPGSAILEMKK 14
+GPG+ +LE K
Sbjct: 355 QGPGAKLLEEMK 366


>sp|YPV5A_METTF|UNCHARACTERIZED protein ORF5A|Methanothermobacter thermautotrophicus

Query: 1 KNRGPGSA 8
KNRGP A
Sbjct: 173 KNRGPHDA 180


>sp|SYY_PYRCJ|TYROSINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 RGPGSAILE 11
+GPG+ +LE
Sbjct: 355 QGPGAKLLE 363


>sp|RL19E_THEKO|LARGE ribosomal subunit protein eL19|Thermococcus kodakarensis (strain

Query: 1 KNRGPGS 7
++RGPGS
Sbjct: 74 RHRGPGS 80


>sp|MER_METKA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanopyrus kandleri (strain AV19 /

Query: 4 GPGSAILEMKK 14
GP +AI E+K+
Sbjct: 126 GPATAIREVKE 136


>sp|RL19E_PYRAB|LARGE ribosomal subunit protein eL19|Pyrococcus abyssi (strain GE5 /

Query: 1 KNRGPGS 7
++RGPGS
Sbjct: 74 RHRGPGS 80


>sp|RL19E_PYRHO|LARGE ribosomal subunit protein eL19|Pyrococcus horikoshii (strain ATCC

Query: 1 KNRGPGS 7
++RGPGS
Sbjct: 74 RHRGPGS 80


>sp|RL19E_PYRFU|LARGE ribosomal subunit protein eL19|Pyrococcus furiosus (strain ATCC

Query: 1 KNRGPGS 7
++RGPGS
Sbjct: 74 RHRGPGS 80


>sp|MPTN_METAC|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KNRGPGSAILEM 12
K+ G GS ILE+
Sbjct: 284 KSTGQGSRILEV 295






THE END