VPS35_HUMAN Blast Output
Archaea
1|Sequence|1|10|MPTTQQSPQD

>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila (strain

Query: 2 PTTQQSPQD 10
PTT+QS +D
Sbjct: 1012 PTTKQSVKD 1020


>sp|FLAX_SULAC|ARCHAEAL flagellar motor scaffold protein|Sulfolobus acidocaldarius

Query: 4 TQQSPQD 10
TQQSPQ+
Sbjct: 42 TQQSPQN 48




2|Sequence|6|15|QSPQDEQEKL

>sp|PURA_ARCFU|ADENYLOSUCCINATE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QSPQDEQEKL 10
+ PQ+E EKL
Sbjct: 233 EMPQEEAEKL 242


>sp|PUR5_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PQDEQEKL 10
P+DE +KL
Sbjct: 295 PEDEADKL 302


>sp|PURA_THEKO|ADENYLOSUCCINATE synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QSPQDEQEKL 10
+ PQ+E E+L
Sbjct: 236 EMPQEEAERL 245


>sp|GFCR_METMP|TRANSCRIPTIONAL regulator GfcR|Methanococcus maripaludis (strain DSM 14266

Query: 1 QSPQDEQEKL 10
+SP+++ EKL
Sbjct: 48 ESPKEDSEKL 57




3|Sequence|11|20|EQEKLLDEAI

>sp|RS19_NATPD|SMALL ribosomal subunit protein uS19|Natronomonas pharaonis (strain

Query: 1 EQEKLLDEA 9
EQEKLLDEA
Sbjct: 50 EQEKLLDEA 58


>sp|THII_SULTO|PROBABLE tRNA sulfurtransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EQEKLLDEA 9
E EKL+DEA
Sbjct: 355 EYEKLIDEA 363


>sp|SYH_METS5|HISTIDINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 EQEKLLDEAI 10
E EK+LDE I
Sbjct: 195 EAEKILDEKI 204


>sp|Y1446_ARCFU|UNCHARACTERIZED protein AF_1446|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QEKLLDEAI 10
QE+LLDE +
Sbjct: 105 QERLLDEPM 113


>sp|RS3_THEPD|SMALL ribosomal subunit protein uS3|Thermofilum pendens (strain DSM 2475

Query: 3 EKLLDEAI 10
E+L+DEAI
Sbjct: 160 EELVDEAI 167


>sp|IF2B_METST|TRANSLATION initiation factor 2 subunit|Methanosphaera stadtmanae (strain

Query: 1 EQEKLLDEA 9
E EKLLD+A
Sbjct: 10 EYEKLLDQA 18


>sp|IF2P_PYRAB|PROBABLE translation initiation factor IF-2|Pyrococcus abyssi (strain GE5 /

Query: 1 EQEKLLDEAI 10
E+EK L+EAI
Sbjct: 249 EREKALEEAI 258


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EQEKLLDEAI 10
EQE+LLD+ +
Sbjct: 220 EQEELLDQVL 229


>sp|CDVB_SULAC|CELL division protein B|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EQEKLLDEAI 10
EQ+ LDEAI
Sbjct: 32 EQQDRLDEAI 41


>sp|Y1209_CALMQ|PROTEIN Cmaq_1209|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 EQEKLLDEAI 10
E E +LDEA+
Sbjct: 155 EMEAILDEAL 164




4|Sequence|16|25|LDEAIQAVKV

>sp|MDH_AERPE|MALATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LDEAIQAVK 9
DEA+QAVK
Sbjct: 288 FDEAVQAVK 296


>sp|ATGT_SULTO|TRNA-GUANINE(15) transglycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DEAIQAVKV 10
DEAI +VK+
Sbjct: 131 DEAINSVKI 139


>sp|APE1_SACS2|PROBABLE aminopeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LDEAIQAVKV 10
LDE ++++KV
Sbjct: 478 LDEGLKSIKV 487


>sp|GGGPS_THEAC|GERANYLGERANYLGLYCERYL phosphate synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LDEAIQAVK 9
+DEAI A+K
Sbjct: 60 MDEAISAIK 68


>sp|GGGPS_PYRFU|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LDEAIQAVK 9
LDE ++A+K
Sbjct: 62 LDEVVKAIK 70


>sp|TRET_THELN|TREHALOSE synthase|Thermococcus litoralis (strain ATCC 51850

Query: 2 DEAIQAVK 9
DEA++A+K
Sbjct: 23 DEALEAIK 30


>sp|TRET_PYRFU|TREHALOSE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DEAIQAVK 9
DEA++A+K
Sbjct: 23 DEALEAIK 30




5|Sequence|21|30|QAVKVQSFQM

***** No hits found ******


6|Sequence|26|35|QSFQMKRCLD

>sp|ELP3_METJA|TRNA uridine(34) acetyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 QSFQMKRCLD 10
Q + +KRCLD
Sbjct: 174 QDWFIKRCLD 183


>sp|ELP3_METIM|TRNA uridine(34) acetyltransferase|Methanocaldococcus infernus (strain

Query: 1 QSFQMKRCLD 10
Q + +KRCLD
Sbjct: 168 QDWFIKRCLD 177


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 5 MKRCLD 10
+KRCLD
Sbjct: 702 IKRCLD 707


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 5 MKRCLD 10
+KRCLD
Sbjct: 744 IKRCLD 749


>sp|SYR_METHJ|ARGININE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 MKRCLD 10
+KRCLD
Sbjct: 228 VKRCLD 233


>sp|HEM1_PYRNV|GLUTAMYL-TRNA reductase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 QMKRCLD 10
+MKRC++
Sbjct: 28 EMKRCIE 34




7|Sequence|31|40|KRCLDKNKLM

>sp|FTHS_METLZ|FORMATE--TETRAHYDROFOLATE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 KRCLDKN 7
KRCLD N
Sbjct: 169 KRCLDMN 175


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KRCLDKNKL 9
K+CLD NK+
Sbjct: 663 KKCLDCNKI 671


>sp|Y1412_METJA|UPF0288 protein MJ1412|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RCLDKNKLM 10
R LDKNK++
Sbjct: 362 RGLDKNKII 370


>sp|HIS6_META3|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus aeolicus (strain

Query: 1 KRCLDKN 7
K C+DKN
Sbjct: 264 KYCMDKN 270




8|Sequence|36|45|KNKLMDALKH

>sp|EF1B_METAR|ELONGATION factor 1-beta|Methanocella arvoryzae (strain DSM 22066

Query: 2 NKLMDALK 9
N+LMDALK
Sbjct: 20 NELMDALK 27


>sp|VHCG_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit G|Archaeoglobus profundus (strain

Query: 3 KLMDALKH 10
KL+DAL+H
Sbjct: 26 KLVDALEH 33


>sp|COFD_METBU|2-PHOSPHO-L-LACTATE transferase|Methanococcoides burtonii (strain DSM 6242

Query: 3 KLMDALKH 10
KL+D L+H
Sbjct: 12 KLLDGLRH 19


>sp|Y2099_SACI3|PROTEIN M1627_2099|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 KNKLMDALK 9
KN+L+DA+K
Sbjct: 245 KNELLDAIK 253


>sp|Y772_SACI1|PROTEIN YN1551_0772|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 KNKLMDALK 9
KN+L+DA+K
Sbjct: 245 KNELLDAIK 253


>sp|Y2186_SACI2|PROTEIN LS215_2186|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 KNKLMDALK 9
KN+L+DA+K
Sbjct: 245 KNELLDAIK 253


>sp|Y2147_SACI7|PROTEIN YG5714_2147|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 KNKLMDALK 9
KN+L+DA+K
Sbjct: 245 KNELLDAIK 253


>sp|Y2028_SACI6|PROTEIN M164_2028|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KNKLMDALK 9
KN+L+DA+K
Sbjct: 245 KNELLDAIK 253


>sp|Y2021_SACI4|PROTEIN M1425_2021|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KNKLMDALK 9
KN+L+DA+K
Sbjct: 245 KNELLDAIK 253


>sp|EF2_METJA|ELONGATION factor 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KNKLMDALKH 10
K KLMDA+ H
Sbjct: 588 KVKLMDAVLH 597


>sp|CAS2B_PYRAE|CRISPR-ASSOCIATED endoribonuclease Cas2 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KNKLMDALK 9
+NK+ DALK
Sbjct: 15 RNKVADALK 23


>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KNKLMDALKH 10
K KLMDA+ H
Sbjct: 589 KVKLMDAVFH 598


>sp|Y819_METJA|PUTATIVE uncharacterized protein MJ0819|Methanocaldococcus jannaschii

Query: 2 NKLMDALK 9
NK++DALK
Sbjct: 51 NKIVDALK 58


>sp|EF2_SULTO|ELONGATION factor 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 NKLMDALK 9
NK++DAL+
Sbjct: 411 NKMIDALR 418


>sp|Y1637_METJA|UNCHARACTERIZED protein MJ1637|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KLMDALK 9
KLMDALK
Sbjct: 118 KLMDALK 124




9|Sequence|41|50|DALKHASNML

>sp|MTIP_METJA|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanocaldococcus jannaschii

Query: 1 DALKHA 6
DALKHA
Sbjct: 244 DALKHA 249


>sp|PYRG_PYRHO|CTP synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DALKHAS 7
+ALKHAS
Sbjct: 309 EALKHAS 315


>sp|PYRG_PYRFU|CTP synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DALKHAS 7
+ALKHAS
Sbjct: 309 EALKHAS 315


>sp|PYRG_PYRAB|CTP synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 DALKHAS 7
+ALKHAS
Sbjct: 309 EALKHAS 315


>sp|PYRG_AERPE|CTP synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DALKHAS 7
+ALKHAS
Sbjct: 313 EALKHAS 319


>sp|RS8E_HALLT|SMALL ribosomal subunit protein eS8|Halorubrum lacusprofundi (strain

Query: 3 LKHASN 8
LKHASN
Sbjct: 16 LKHASN 21


>sp|PYRG_HALSA|CTP synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DALKHAS 7
+ALKHAS
Sbjct: 320 EALKHAS 326


>sp|PYRG_HALS3|CTP synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DALKHAS 7
+ALKHAS
Sbjct: 320 EALKHAS 326


>sp|SYS_METAC|SERINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DALKHASNML 10
D+LKH N++
Sbjct: 46 DSLKHKRNVV 55


>sp|PYRG_METPE|CTP synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 DALKHASNML 10
+ALKHA L
Sbjct: 309 EALKHAGRAL 318


>sp|PYRG_METB6|CTP synthase|Methanoregula boonei (strain DSM 21154

Query: 1 DALKHASNML 10
+ALKHA L
Sbjct: 310 EALKHAGRAL 319




10|Sequence|46|55|ASNMLGELRT

>sp|GATB_HALMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloarcula marismortui (strain ATCC

Query: 1 ASNMLGEL 8
A N+LGEL
Sbjct: 376 ADNLLGEL 383


>sp|GATB_NATPD|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Natronomonas pharaonis (strain ATCC

Query: 1 ASNMLGEL 8
A N+LGEL
Sbjct: 367 ADNLLGEL 374


>sp|GATB_HALWD|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ASNMLGEL 8
A N+LGEL
Sbjct: 365 ADNLLGEL 372


>sp|GATB_HALSA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Halobacterium salinarum (strain ATCC

Query: 1 ASNMLGEL 8
A N+LGEL
Sbjct: 365 ADNVLGEL 372




11|Sequence|51|60|GELRTSMLSP

>sp|NASA_HALMT|ASSIMILATORY nitrate reductase|Haloferax mediterranei (strain ATCC 33500

Query: 1 GELRTSMLS 9
GELRT+++S
Sbjct: 629 GELRTTVVS 637


>sp|TRPD_METBF|ANTHRANILATE phosphoribosyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 4 RTSMLSP 10
RTS+LSP
Sbjct: 354 RTSILSP 360




12|Sequence|56|65|SMLSPKSYYE

>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 1 SMLSPKSYY 9
++L+PK YY
Sbjct: 538 AILAPKPYY 546


>sp|GCSH_AERPE|PROBABLE glycine cleavage system H|Aeropyrum pernix (strain ATCC 700893

Query: 1 SMLSPKSYYE 10
S+L+P+ Y E
Sbjct: 127 SLLTPEQYVE 136


>sp|Y1162_METJA|UNCHARACTERIZED protein MJ1162|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 SPKSYY 9
SPKSY+
Sbjct: 196 SPKSYF 201


>sp|APGM_METS5|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Metallosphaera sedula (strain ATCC 51363

Query: 3 LSPKSYYE 10
L PK YY+
Sbjct: 69 LDPKKYYK 76


>sp|CSM3_METJA|CRISPR system Cms endoribonuclease Csm3|Methanocaldococcus jannaschii

Query: 5 PKSYYE 10
PK YYE
Sbjct: 211 PKEYYE 216


>sp|TRUA_METBU|TRNA pseudouridine synthase A|Methanococcoides burtonii (strain DSM 6242

Query: 2 MLSPKSYYE 10
ML P+SY E
Sbjct: 203 MLDPESYEE 211


>sp|Y1038_PYRHO|PROBABLE ABC transporter permease protein|Pyrococcus horikoshii (strain ATCC

Query: 5 PKSYYE 10
PK YYE
Sbjct: 188 PKDYYE 193


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 1 SMLSPKSYY 9
++L+P+ YY
Sbjct: 538 AILAPREYY 546


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 1 SMLSPKSYY 9
++L+P+ YY
Sbjct: 538 AILAPREYY 546


>sp|SMC_THEAC|CHROMOSOME partition protein Smc|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 PKSYY 9
PKSYY
Sbjct: 101 PKSYY 105




13|Sequence|61|70|KSYYELYMAI

>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 SYYELYMAI 10
+YY+LY A+
Sbjct: 124 TYYQLYQAV 132


>sp|G3P_METFE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermus fervidus

Query: 1 KSYYELYMAI 10
K Y+LY+AI
Sbjct: 45 KKGYDLYVAI 54


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KSYYELY 7
KS+Y+LY
Sbjct: 1040 KSHYQLY 1046


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 KSYYELYMAI 10
K Y ELY A+
Sbjct: 783 KHYAELYAAV 792


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KSYYELYMAI 10
K Y ELYM +
Sbjct: 55 KGYSELYMDL 64




14|Sequence|66|75|LYMAISDELH

>sp|AAT_METJA|PROBABLE aspartate aminotransferase|Methanocaldococcus jannaschii (strain

Query: 2 YMAISDELH 10
Y+A+SDEL+
Sbjct: 234 YLAVSDELN 242


>sp|SYW_SULAC|TRYPTOPHAN--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 AISDELH 10
AI+DELH
Sbjct: 41 AINDELH 47


>sp|THIO_METTM|PROBABLE Thioredoxin|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 LYMAISDEL 9
L+ AISDE+
Sbjct: 76 LFEAISDEI 84


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 MAISDELH 10
+ ISDE+H
Sbjct: 917 LEISDEIH 924


>sp|KPRS_METAC|RIBOSE-PHOSPHATE pyrophosphokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LYMAISDEL 9
LY+ I+DE+
Sbjct: 37 LYLRIADEI 45


>sp|RS4_HALMA|SMALL ribosomal subunit protein uS4|Haloarcula marismortui (strain ATCC

Query: 2 YMAISDELH 10
+ ++SDELH
Sbjct: 155 HSSLSDELH 163




15|Sequence|71|80|SDELHYLEVY

>sp|HELS_PYRCJ|ATP-DEPENDENT DNA helicase Hel308|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 DELHYL 7
DE+HYL
Sbjct: 143 DEIHYL 148


>sp|DPHB_SULTO|DIPHTHINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SDELHYLEV 9
+D+LH++EV
Sbjct: 238 TDKLHFMEV 246


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DELHYLEV 9
+ELHYL V
Sbjct: 158 EELHYLNV 165


>sp|Y640_METJA|UNCHARACTERIZED protein MJ0640|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DELHYLEVY 10
D +H+L+VY
Sbjct: 254 DLIHWLKVY 262


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DELHYL 7
DELHYL
Sbjct: 145 DELHYL 150


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 2 DELHYL 7
DELHYL
Sbjct: 152 DELHYL 157


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 2 DELHYL 7
DELHYL
Sbjct: 152 DELHYL 157


>sp|FBPAP_CENSY|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Cenarchaeum symbiosum (strain A)

Query: 2 DELHYLEVY 10
DEL Y E Y
Sbjct: 338 DELEYAEGY 346


>sp|CAS3_METJA|PUTATIVE CRISPR-associated nuclease/helicase Cas3|Methanocaldococcus

Query: 2 DELHYLEVY 10
DE+HY E Y
Sbjct: 352 DEVHYYEKY 360


>sp|RPO6_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo6|Saccharolobus shibatae (strain ATCC

Query: 1 SDELHYLEVY 10
S +LH+ EV+
Sbjct: 10 SQDLHFNEVF 19


>sp|RPO6_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo6|Saccharolobus solfataricus (strain

Query: 1 SDELHYLEVY 10
S +LH+ EV+
Sbjct: 10 SQDLHFNEVF 19


>sp|RPO6_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo6|Saccharolobus islandicus (strain

Query: 1 SDELHYLEVY 10
S +LH+ EV+
Sbjct: 10 SQDLHFNEVF 19


>sp|RPO6_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo6|Saccharolobus islandicus (strain

Query: 1 SDELHYLEVY 10
S +LH+ EV+
Sbjct: 10 SQDLHFNEVF 19


>sp|RPO6_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo6|Saccharolobus islandicus (strain

Query: 1 SDELHYLEVY 10
S +LH+ EV+
Sbjct: 10 SQDLHFNEVF 19


>sp|ADEC_METMA|ADENINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DELHYL 7
D+LHYL
Sbjct: 137 DDLHYL 142




16|Sequence|76|85|YLEVYLTDEF

>sp|RPO1C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halobacterium salinarum (strain ATCC

Query: 2 LEVYLTDEF 10
+EVYL DE+
Sbjct: 115 MEVYLEDEY 123


>sp|RPO1C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halobacterium salinarum (strain ATCC

Query: 2 LEVYLTDEF 10
+EVYL DE+
Sbjct: 115 MEVYLEDEY 123


>sp|RPO1C_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus solfataricus (strain

Query: 2 LEVYLTDEF 10
+ +YLTDE+
Sbjct: 119 MTIYLTDEY 127


>sp|RPO1C_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus shibatae (strain ATCC

Query: 2 LEVYLTDEF 10
+ +YLTDE+
Sbjct: 119 MTIYLTDEY 127


>sp|RPO1C_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 2 LEVYLTDEF 10
+ +YLTDE+
Sbjct: 119 MTIYLTDEY 127


>sp|RPO1C_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 2 LEVYLTDEF 10
+ +YLTDE+
Sbjct: 119 MTIYLTDEY 127


>sp|RPO1C_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 2 LEVYLTDEF 10
+ +YLTDE+
Sbjct: 119 MTIYLTDEY 127


>sp|RPO1C_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 2 LEVYLTDEF 10
+ +YLTDE+
Sbjct: 119 MTIYLTDEY 127


>sp|RPO1C_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 2 LEVYLTDEF 10
+ +YLTDE+
Sbjct: 119 MTIYLTDEY 127


>sp|RPO1C_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 2 LEVYLTDEF 10
+ +YLTDE+
Sbjct: 119 MTIYLTDEY 127


>sp|PYRI_SACI7|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 1 YLEVYLTDE 9
Y E+Y+T+E
Sbjct: 144 YCEIYITEE 152


>sp|PYRI_SACI6|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 1 YLEVYLTDE 9
Y E+Y+T+E
Sbjct: 144 YCEIYITEE 152


>sp|PYRI_SACI4|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 1 YLEVYLTDE 9
Y E+Y+T+E
Sbjct: 144 YCEIYITEE 152


>sp|PYRI_SACI3|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 1 YLEVYLTDE 9
Y E+Y+T+E
Sbjct: 144 YCEIYITEE 152


>sp|PYRI_SACI2|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 1 YLEVYLTDE 9
Y E+Y+T+E
Sbjct: 144 YCEIYITEE 152


>sp|PYRI_SACI1|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 1 YLEVYLTDE 9
Y E+Y+T+E
Sbjct: 144 YCEIYITEE 152


>sp|Y1512_SULAC|UPF0173 metal-dependent hydrolase Saci_1512|Sulfolobus acidocaldarius

Query: 2 LEVYLTDEF 10
LEVYL++E+
Sbjct: 78 LEVYLSNEY 86


>sp|RPO1C_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Sulfolobus acidocaldarius (strain ATCC

Query: 2 LEVYLTDEF 10
+ +YLTDE+
Sbjct: 120 MTIYLTDEY 128


>sp|RPO1C_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Sulfurisphaera tokodaii (strain DSM

Query: 2 LEVYLTDEF 10
+ +YLTDE+
Sbjct: 119 MTIYLTDEY 127


>sp|RPO1C_METMP|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain DSM

Query: 2 LEVYLTDEF 10
+ +YL DEF
Sbjct: 112 MTIYLNDEF 120


>sp|RPO1C_METM5|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C5 /

Query: 2 LEVYLTDEF 10
+ +YL DEF
Sbjct: 112 MTIYLNDEF 120


>sp|RPO1C_METM7|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C7 /

Query: 2 LEVYLTDEF 10
+ +YL DEF
Sbjct: 112 MTIYLNDEF 120


>sp|T2MT_METTF|TYPE II restriction enzyme MthTI|Methanothermobacter

Query: 2 LEVYLTDEF 10
LEV+L D F
Sbjct: 39 LEVFLKDAF 47


>sp|RSMA_NATPD|PROBABLE ribosomal RNA small subunit|Natronomonas pharaonis (strain ATCC

Query: 2 LEVYLTDEF 10
L +LTDEF
Sbjct: 76 LATFLTDEF 84


>sp|PYRG_METST|CTP synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 EVYLTDE 9
EVY+TD+
Sbjct: 58 EVYVTDD 64


>sp|DTDA_ARCFU|D-AMINOACYL-TRNA deacylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EVYLTDEF 10
++YL+DEF
Sbjct: 35 KLYLSDEF 42




17|Sequence|81|90|LTDEFAKGRK

>sp|GATE_THEKO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus kodakarensis (strain ATCC

Query: 3 DEFAKGRK 10
+EF KGRK
Sbjct: 63 EEFKKGRK 70


>sp|GATE_THEGJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus gammatolerans (strain DSM

Query: 3 DEFAKGRK 10
+EF KGRK
Sbjct: 63 EEFKKGRK 70


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LTDEFAK 7
L DEFAK
Sbjct: 696 LADEFAK 702


>sp|RSMA_NATPD|PROBABLE ribosomal RNA small subunit|Natronomonas pharaonis (strain ATCC

Query: 1 LTDEFA 6
LTDEFA
Sbjct: 80 LTDEFA 85




18|Sequence|86|95|AKGRKVADLY

>sp|PURL_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KGRKVADL 9
KGRKVA+L
Sbjct: 341 KGRKVAEL 348


>sp|HELS_SULAC|ATP-DEPENDENT DNA helicase Hel308|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GRKVADLY 10
GR+V+DLY
Sbjct: 495 GRRVSDLY 502


>sp|AATI_PYRHO|A-TYPE ATP synthase subunit I|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AKGRKVADLY 10
++GRKVA+ Y
Sbjct: 255 SRGRKVAERY 264


>sp|PURL_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus gammatolerans (strain DSM 15229

Query: 2 KGRKVADL 9
KG KVADL
Sbjct: 340 KGEKVADL 347


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GRKVADLY 10
GR+++DLY
Sbjct: 494 GRRISDLY 501


>sp|PURL_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus kodakarensis (strain ATCC

Query: 2 KGRKVADL 9
KG KVADL
Sbjct: 341 KGEKVADL 348


>sp|ARLMC_PYRAB|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus abyssi (strain

Query: 1 AKGRKVADLY 10
A+G KV DLY
Sbjct: 270 AEGSKVLDLY 279


>sp|GAL1_THEKO|GALACTOKINASE kodakarensis (strain ATCC BAA-918

Query: 3 GRKVADLY 10
GR+VA+LY
Sbjct: 321 GREVAELY 328


>sp|LEUC_HALVD|3-ISOPROPYLMALATE dehydratase large subunit|Haloferax volcanii (strain ATCC 29605

Query: 2 KGRKVAD 8
KGR+VAD
Sbjct: 364 KGRQVAD 370


>sp|RL30_SACI7|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 AKGRKVADLY 10
AKG KV+D Y
Sbjct: 76 AKGDKVSDSY 85


>sp|RL30_SACI6|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 AKGRKVADLY 10
AKG KV+D Y
Sbjct: 76 AKGDKVSDSY 85


>sp|RL30_SACI4|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 AKGRKVADLY 10
AKG KV+D Y
Sbjct: 76 AKGDKVSDSY 85


>sp|RL30_SACI3|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 AKGRKVADLY 10
AKG KV+D Y
Sbjct: 76 AKGDKVSDSY 85


>sp|RL30_SACI2|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 AKGRKVADLY 10
AKG KV+D Y
Sbjct: 76 AKGDKVSDSY 85


>sp|RL30_SACI1|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 AKGRKVADLY 10
AKG KV+D Y
Sbjct: 76 AKGDKVSDSY 85


>sp|LEUC_HALMA|3-ISOPROPYLMALATE dehydratase large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 2 KGRKVAD 8
KGR+VAD
Sbjct: 364 KGREVAD 370


>sp|G3P_METB6|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanoregula boonei (strain DSM 21154

Query: 3 GRKVADLY 10
GR+ ADLY
Sbjct: 270 GRQRADLY 277


>sp|Y666_ARCFU|UPF0251 protein AF_0666|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KGRKVADLY 10
+GRK+ D+Y
Sbjct: 10 RGRKLRDIY 18


>sp|PUR7_THEAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 GRKVADLY 10
RKV+DLY
Sbjct: 275 ARKVSDLY 282


>sp|ARLY_PYRAR|ARGININOSUCCINATE lyase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 KGRKVADLY 10
KGR+ A+LY
Sbjct: 349 KGRRDAELY 357


>sp|ATRMA_PYRFU|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus furiosus (strain

Query: 2 KGRKVADLY 10
+G KV D+Y
Sbjct: 272 EGEKVVDMY 280


>sp|CETZ_THEKO|TUBULIN-LIKE protein CetZ|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GRKVADLY 10
G K+ADL+
Sbjct: 12 GTKIADLF 19


>sp|DLHH_SACS2|PUTATIVE carboxymethylenebutenolidase|Saccharolobus solfataricus (strain

Query: 2 KGRKVADL 9
KG+KVA+L
Sbjct: 104 KGKKVAEL 111


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 1 AKGRKVADLY 10
+KG+K DL+
Sbjct: 217 SKGKKTRDLW 226


>sp|RS5_NATPD|SMALL ribosomal subunit protein uS5|Natronomonas pharaonis (strain ATCC

Query: 3 GRKVAD 8
GRKVAD
Sbjct: 12 GRKVAD 17




19|Sequence|91|100|VADLYELVQY

>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 VADLYELVQY 10
V DL+EL+QY
Sbjct: 258 VEDLWELLQY 267


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 VADLYELVQY 10
V DL+EL+QY
Sbjct: 258 VEDLWELLQY 267


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 VADLYELVQY 10
+ DL+EL+QY
Sbjct: 334 IEDLWELLQY 343


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 VADLYELVQY 10
+ DL+EL+QY
Sbjct: 334 IEDLWELLQY 343


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 1 VADLYELVQY 10
+ DL++L+QY
Sbjct: 268 IEDLWDLLQY 277


>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 1 VADLYELVQY 10
+ DL++L+QY
Sbjct: 262 IEDLWDLLQY 271


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 1 VADLYELVQY 10
+ DL++L+QY
Sbjct: 265 IEDLWDLLQY 274


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 1 VADLYELVQY 10
+ DL++L+QY
Sbjct: 262 IEDLWDLLQY 271


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 1 VADLYELVQY 10
+ DL++L+QY
Sbjct: 262 IEDLWDLLQY 271


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 VADLYELVQY 10
+ DL+ L+QY
Sbjct: 265 IEDLWNLLQY 274


>sp|Y1656_METJA|UNCHARACTERIZED protein MJ1656|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VADLYELVQY 10
+ D+YELV++
Sbjct: 180 IFDVYELVEF 189


>sp|G3P_METS5|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Metallosphaera sedula (strain ATCC 51363

Query: 3 DLYELVQY 10
DLYELV +
Sbjct: 274 DLYELVVF 281


>sp|GATB_METBU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcoides burtonii (strain DSM

Query: 1 VADLYELV 8
VAD YE+V
Sbjct: 326 VADFYEVV 333


>sp|CDPAS_METLZ|CDP-ARCHAEOL synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 VADLYELV 8
+AD+Y++V
Sbjct: 107 IADMYDMV 114


>sp|LEU1_PYRAB|2-ISOPROPYLMALATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 DLYELVQY 10
+ YELV+Y
Sbjct: 178 EFYELVRY 185


>sp|DNLJ_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 1 VADLYELV 8
VADLY+L
Sbjct: 486 VADLYDLT 493




20|Sequence|96|105|ELVQYAGNII

>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 4 QYAGNII 10
QY GN+I
Sbjct: 221 QYGGNVI 227


>sp|MTD_METHJ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanospirillum

Query: 1 ELVQYAGNII 10
E+ Y GN+I
Sbjct: 133 EMADYNGNLI 142


>sp|AATE_METBU|A-TYPE ATP synthase subunit E|Methanococcoides burtonii (strain DSM 6242

Query: 3 VQYAGNI 9
++YAGNI
Sbjct: 135 LEYAGNI 141


>sp|SEPS_METM6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C6 /

Query: 1 ELVQYAGNII 10
E+ Y GN+I
Sbjct: 427 EIYMYDGNVI 436




21|Sequence|101|110|AGNIIPRLYL

>sp|NADE_PYRAE|NH(3)-DEPENDENT NAD(+) synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AGNIIPRLYL 10
AGNI+PR+ +
Sbjct: 117 AGNILPRIRM 126


>sp|PGP_PICTO|PHOSPHOGLYCOLATE phosphatase|Picrophilus torridus (strain ATCC 700027

Query: 1 AGNIIPRLY 9
+GN++P LY
Sbjct: 54 SGNVLPVLY 62


>sp|PGP_THEVO|PHOSPHOGLYCOLATE phosphatase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 AGNIIPRLY 9
+GN+IP +Y
Sbjct: 42 SGNVIPVVY 50


>sp|PGP_THEAC|PHOSPHOGLYCOLATE phosphatase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 AGNIIPRLY 9
+GN+IP +Y
Sbjct: 42 SGNVIPVVY 50


>sp|Y1471_METMP|UNCHARACTERIZED protein MMP1471|Methanococcus maripaludis (strain DSM 14266

Query: 2 GNIIPRLYL 10
G+IIPR Y+
Sbjct: 135 GDIIPRGYI 143


>sp|MCAL_HALMA|L-MALYL-COA/BETA-METHYLMALYL-COA lyase|Haloarcula marismortui (strain ATCC 43049

Query: 1 AGNIIPRL 8
AG+I+PR+
Sbjct: 71 AGDILPRV 78




22|Sequence|106|115|PRLYLLITVG

>sp|G1PDH_CALMQ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Caldivirga maquilingensis (strain ATCC

Query: 1 PRLYLLITVG 10
PR++LL +G
Sbjct: 159 PRVFLLAGIG 168


>sp|RL2_METPE|LARGE ribosomal subunit protein uL2|Methanosphaerula palustris (strain

Query: 2 RLYLLITVG 10
++YLL+T G
Sbjct: 66 KVYLLVTEG 74




23|Sequence|111|120|LITVGVVYVK

>sp|HTR1_HALMA|SENSORY rhodopsin I transducer|Haloarcula marismortui (strain ATCC 43049

Query: 1 LITVGVV 7
LITVGVV
Sbjct: 25 LITVGVV 31


>sp|CHEB1_METAC|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina

Query: 2 ITVGVVYV 9
+T G+VYV
Sbjct: 221 VTAGIVYV 228


>sp|CHEB1_METMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina mazei

Query: 2 ITVGVVYV 9
+T GVVY+
Sbjct: 229 VTAGVVYI 236




24|Sequence|116|125|VVYVKSFPQS

>sp|Y1980_AERPE|PROTEIN APE_1980.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 VYVKSFPQ 9
VYVKS PQ
Sbjct: 210 VYVKSHPQ 217


>sp|FLAB2_THEKO|FLAGELLIN B2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VVYVKSFPQS 10
V+Y K FP S
Sbjct: 261 VIYNKDFPDS 270


>sp|Y2099_SACI3|PROTEIN M1627_2099|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 VYVKSFPQS 10
+Y+K+ P+S
Sbjct: 208 IYIKTHPKS 216


>sp|Y772_SACI1|PROTEIN YN1551_0772|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 VYVKSFPQS 10
+Y+K+ P+S
Sbjct: 208 IYIKTHPKS 216


>sp|Y2186_SACI2|PROTEIN LS215_2186|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 VYVKSFPQS 10
+Y+K+ P+S
Sbjct: 208 IYIKTHPKS 216


>sp|Y2147_SACI7|PROTEIN YG5714_2147|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 VYVKSFPQS 10
+Y+K+ P+S
Sbjct: 208 IYIKTHPKS 216


>sp|Y2028_SACI6|PROTEIN M164_2028|Saccharolobus islandicus (strain M.16.4 /

Query: 2 VYVKSFPQS 10
+Y+K+ P+S
Sbjct: 208 IYIKTHPKS 216


>sp|Y2021_SACI4|PROTEIN M1425_2021|Saccharolobus islandicus (strain M.14.25 /

Query: 2 VYVKSFPQS 10
+Y+K+ P+S
Sbjct: 208 IYIKTHPKS 216


>sp|Y1209_CALMQ|PROTEIN Cmaq_1209|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 VVYVKSFPQ 9
+VYVKS P+
Sbjct: 203 LVYVKSHPK 211


>sp|Y103_SACS2|PROTEIN SSO0103|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VYVKSFPQS 10
+Y+K+ P+S
Sbjct: 216 IYIKTHPKS 224




25|Sequence|121|130|SFPQSRKDIL

>sp|AROD_METBF|3-DEHYDROQUINATE dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PQSRKDIL 10
PQSR+D+L
Sbjct: 167 PQSRRDVL 174


>sp|Y651_METJA|PUTATIVE protease MJ0651|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FPQSRKD 8
FPQ +KD
Sbjct: 62 FPQQKKD 68


>sp|KPTA1_ARCFU|PROBABLE RNA 2'-phosphotransferase 1|Archaeoglobus fulgidus (strain ATCC

Query: 2 FPQSRKDIL 10
FP++++D+L
Sbjct: 116 FPEAKEDVL 124


>sp|Y942_METJA|PROBABLE ATP-dependent helicase MJ0942|Methanocaldococcus jannaschii (strain

Query: 2 FPQSRKDIL 10
FP++RK I+
Sbjct: 420 FPKNRKKII 428


>sp|AROD_METVS|3-DEHYDROQUINATE dehydratase|Methanococcus vannielii (strain ATCC 35089

Query: 1 SFPQSRKDIL 10
+F S+KD+L
Sbjct: 145 TFSNSKKDVL 154




26|Sequence|126|135|RKDILKDLVE

>sp|PFDB_METAR|PREFOLDIN subunit beta|Methanocella arvoryzae (strain DSM 22066

Query: 1 RKDILKDLVE 10
R+D+LKDL E
Sbjct: 68 REDVLKDLEE 77


>sp|UVRB_METST|UVRABC system protein B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 RKDILKDLV 9
R+DILK+LV
Sbjct: 168 REDILKELV 176


>sp|MFNA_METS3|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanobrevibacter smithii

Query: 1 RKDILKDLVE 10
+KDILK+L E
Sbjct: 8 KKDILKELNE 17


>sp|Y1020_PYRFU|PUTATIVE phosphate permease PF1020|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KDILKDLV 9
KDI+KD++
Sbjct: 379 KDIVKDII 386


>sp|RS6E_PYRAE|SMALL ribosomal subunit protein eS6|Pyrobaculum aerophilum (strain ATCC

Query: 4 ILKDLVE 10
ILKDL+E
Sbjct: 42 ILKDLIE 48


>sp|RF1_METTH|PEPTIDE chain release factor subunit|Methanothermobacter thermautotrophicus

Query: 1 RKDILKDLVE 10
R+D++ DLVE
Sbjct: 361 RRDMIDDLVE 370


>sp|Y923_METJA|UNCHARACTERIZED protein MJ0923|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RKDILKDLVE 10
+K+ILK LVE
Sbjct: 276 QKEILKTLVE 285


>sp|FLAJ_METJA|FLAGELLA accessory protein J|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RKDILKDLVE 10
RKD+LK L E
Sbjct: 97 RKDLLKILSE 106


>sp|TRPC_METJA|INDOLE-3-GLYCEROL phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RKDILKDL 8
RKDI+K+L
Sbjct: 20 RKDIIKNL 27


>sp|RS24_SACI4|SMALL ribosomal subunit protein eS24|Saccharolobus islandicus (strain

Query: 1 RKDILKDLVE 10
RKDI+K +++
Sbjct: 45 RKDIIKAIIQ 54


>sp|RS24_SACI3|SMALL ribosomal subunit protein eS24|Saccharolobus islandicus (strain

Query: 1 RKDILKDLVE 10
RKDI+K +++
Sbjct: 45 RKDIIKAIIQ 54


>sp|RS24_SACI7|SMALL ribosomal subunit protein eS24|Saccharolobus islandicus (strain

Query: 1 RKDILKDLVE 10
RKDI+K +++
Sbjct: 45 RKDIIKAIIQ 54


>sp|RS24_SACI2|SMALL ribosomal subunit protein eS24|Saccharolobus islandicus (strain

Query: 1 RKDILKDLVE 10
RKDI+K +++
Sbjct: 45 RKDIIKAIIQ 54


>sp|RS24_SACI1|SMALL ribosomal subunit protein eS24|Saccharolobus islandicus (strain

Query: 1 RKDILKDLVE 10
RKDI+K +++
Sbjct: 45 RKDIIKAIIQ 54


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 KDILKDLVE 10
KD+L DLV+
Sbjct: 748 KDVLNDLVD 756


>sp|RS24_SACS2|SMALL ribosomal subunit protein eS24|Saccharolobus solfataricus (strain

Query: 1 RKDILKDLVE 10
RKDI+K +++
Sbjct: 45 RKDIIKAIIQ 54


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 3 DILKDLVE 10
DIL DL+E
Sbjct: 272 DILHDLIE 279


>sp|Y1318_METJA|UNCHARACTERIZED protein MJ1318|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KDILKDLVE 10
KDI+K+L E
Sbjct: 228 KDIMKELSE 236


>sp|Y1542_METJA|UNCHARACTERIZED protein MJ1542|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RKDILKDLVE 10
RKD+LK+ E
Sbjct: 787 RKDVLKEFKE 796


>sp|MCRZ_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 2 KDILKDLVE 10
+DI++D+VE
Sbjct: 66 EDIVRDMVE 74


>sp|MCRZ_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 2 KDILKDLVE 10
+DI++D+VE
Sbjct: 66 EDIVRDMVE 74




27|Sequence|131|140|KDLVEMCRGV

>sp|HIS8_METKA|HISTIDINOL-PHOSPHATE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 KDLVEMCRGV 10
+D+VE CRGV
Sbjct: 204 RDVVEECRGV 213


>sp|MOAA_SACS2|PROBABLE GTP 3',8-cyclase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KDLVEMCRGV 10
+DLVE+ RG+
Sbjct: 70 RDLVEIVRGL 79


>sp|MOAA_SACI7|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 KDLVEMCRGV 10
+DLVE+ RG+
Sbjct: 70 RDLVEIVRGL 79


>sp|MOAA_SACI2|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 KDLVEMCRGV 10
+DLVE+ RG+
Sbjct: 70 RDLVEIVRGL 79


>sp|MOAA_SACI6|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KDLVEMCRGV 10
+DLVE+ RG+
Sbjct: 70 RDLVEIVRGL 79


>sp|MOAA_SACI4|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KDLVEMCRGV 10
+DLVE+ RG+
Sbjct: 70 RDLVEIVRGL 79


>sp|MOAA_SACI3|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.16.27)

Query: 1 KDLVEMCRGV 10
+DLVE+ RG+
Sbjct: 70 RDLVEIVRGL 79


>sp|MOAA_SACI1|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 KDLVEMCRGV 10
+DLVE+ RG+
Sbjct: 70 RDLVEIVRGL 79


>sp|Y1483_METJA|UNCHARACTERIZED protein MJ1483|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VEMCRGV 10
VE CRGV
Sbjct: 110 VESCRGV 116


>sp|Y068_PYRFU|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus furiosus (strain

Query: 2 DLVEMCRGV 10
+LV++CRG+
Sbjct: 235 ELVKICRGI 243


>sp|FOLD_NITMS|BIFUNCTIONAL protein FolD|Nitrosopumilus maritimus (strain SCM1)

Query: 1 KDLVEMCR 8
K+LVE+C+
Sbjct: 193 KNLVELCQ 200


>sp|Y843_ARCFU|UNCHARACTERIZED protein AF_0843|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KDLVEMCR 8
KDLV+M R
Sbjct: 139 KDLVDMAR 146


>sp|FAEHP_METAR|BIFUNCTIONAL enzyme Fae/Hps|Methanocella arvoryzae (strain DSM 22066

Query: 2 DLVEMCRGV 10
D+VE+ RG+
Sbjct: 301 DIVELHRGI 309


>sp|RS6E_PYRCJ|SMALL ribosomal subunit protein eS6|Pyrobaculum calidifontis (strain

Query: 1 KDLVEMCRGV 10
K+L+E+ +GV
Sbjct: 44 KELIELPKGV 53


>sp|RNFC_METAC|ION-TRANSLOCATING oxidoreductase complex subunit C|Methanosarcina acetivorans (strain

Query: 1 KDLVEMCRG 9
KD++E C G
Sbjct: 312 KDVIEACGG 320


>sp|HEM1_METAR|GLUTAMYL-TRNA reductase|Methanocella arvoryzae (strain DSM 22066

Query: 1 KDLVEMCRG 9
K +VE C+G
Sbjct: 249 KKMVEQCKG 257


>sp|SYFA_METM7|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C7 /

Query: 1 KDLVEMCRGV 10
KDL+E +G+
Sbjct: 297 KDLLEKVKGI 306


>sp|SYFA_METM5|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C5 /

Query: 1 KDLVEMCRGV 10
KDL+E +G+
Sbjct: 297 KDLLEKVKGI 306


>sp|CDC62_METMA|ORC1-TYPE DNA replication protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LVEMCRGV 10
L+ +CRG+
Sbjct: 281 LLHLCRGI 288


>sp|CDC62_METAC|ORC1-TYPE DNA replication protein 2|Methanosarcina acetivorans (strain ATCC

Query: 3 LVEMCRGV 10
L+ +CRG+
Sbjct: 281 LLHLCRGI 288


>sp|Y887_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 KDLVEMCRGV 10
K V MCRG
Sbjct: 114 KKNVRMCRGT 123


>sp|Y1409_METJA|UNCHARACTERIZED protein MJ1409|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KDLVEMCR 8
KD+++ CR
Sbjct: 223 KDIIKYCR 230




28|Sequence|136|145|MCRGVQHPLR

>sp|PRIL_METBU|DNA primase large subunit PriL|Methanococcoides burtonii (strain DSM

Query: 1 MCRGVQHPL 9
+C+GV+HPL
Sbjct: 324 LCKGVKHPL 332


>sp|PCNA_METB6|DNA polymerase sliding clamp|Methanoregula boonei (strain DSM 21154

Query: 1 MCRGVQHPLR 10
+C G+ HP+R
Sbjct: 215 VCLGIDHPVR 224


>sp|PRIL_THEKO|DNA primase large subunit PriL|Thermococcus kodakarensis (strain ATCC

Query: 2 CRGVQHPL 9
CRG+++PL
Sbjct: 373 CRGIKNPL 380


>sp|IF2B_PICTO|TRANSLATION initiation factor 2 subunit|Picrophilus torridus (strain ATCC

Query: 4 GVQHPLR 10
G QHP+R
Sbjct: 128 GAQHPIR 134


>sp|AATA_PYRAE|A-TYPE ATP synthase subunit A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 GVQHPLR 10
GVQ PLR
Sbjct: 84 GVQRPLR 90


>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RGVQHPL 9
RG +HPL
Sbjct: 169 RGTKHPL 175


>sp|PRIL_METBF|DNA primase large subunit PriL|Methanosarcina barkeri (strain Fusaro /

Query: 1 MCRGVQHPL 9
+C + HPL
Sbjct: 316 LCEKINHPL 324


>sp|PRIL_METMA|DNA primase large subunit PriL|Methanosarcina mazei (strain ATCC

Query: 1 MCRGVQHPL 9
+C + HPL
Sbjct: 316 LCEKISHPL 324


>sp|PRIL_HALMA|DNA primase large subunit PriL|Haloarcula marismortui (strain ATCC

Query: 1 MCRGVQHPL 9
+C + HP+
Sbjct: 321 LCEAISHPM 329


>sp|AATA_NITMS|A-TYPE ATP synthase subunit A|Nitrosopumilus maritimus (strain SCM1)

Query: 4 GVQHPLR 10
G+Q PLR
Sbjct: 87 GIQRPLR 93


>sp|HPPA_PYRAE|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Pyrobaculum aerophilum (strain

Query: 4 GVQHPL 9
GV+HPL
Sbjct: 286 GVKHPL 291


>sp|PRIL_METAR|DNA primase large subunit PriL|Methanocella arvoryzae (strain DSM 22066

Query: 1 MCRGVQHPL 9
+C V HPL
Sbjct: 313 LCEYVTHPL 321


>sp|PCNA_METMJ|DNA polymerase sliding clamp|Methanoculleus marisnigri (strain ATCC

Query: 4 GVQHPLR 10
G+ HP+R
Sbjct: 218 GIDHPVR 224


>sp|RPO3_PYRCJ|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum calidifontis (strain DSM

Query: 1 MCRGVQHPL 9
+CR +++PL
Sbjct: 181 VCRNLENPL 189


>sp|MCRD_METBF|METHYL-COENZYME M reductase operon protein|Methanosarcina barkeri (strain Fusaro

Query: 5 VQHPLR 10
V+HPLR
Sbjct: 64 VEHPLR 69


>sp|CAS5_THETK|CRISPR-ASSOCIATED protein Cas5|Thermoproteus tenax (strain ATCC 35583

Query: 1 MCRGVQ 6
MCRG+Q
Sbjct: 48 MCRGLQ 53


>sp|TRPG_ARCFU|ANTHRANILATE synthase component 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MCRGVQHPLR 10
+ +GV++PLR
Sbjct: 105 IFKGVRNPLR 114




29|Sequence|141|150|QHPLRGLFLR

>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QHPLRGLFLR 10
+HP +G++ R
Sbjct: 122 KHPFQGIYYR 131


>sp|SPSS_METKA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 HPLRGLFL 9
HP RG FL
Sbjct: 334 HPRRGYFL 341


>sp|Y2292_ARCFU|UNCHARACTERIZED protein AF_2292|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PLRGLF 8
PLRGLF
Sbjct: 105 PLRGLF 110


>sp|SPSS_METMJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 QHPLRGLFL 9
QH RG FL
Sbjct: 333 QHKKRGFFL 341


>sp|METXA_METPE|HOMOSERINE O-acetyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 QHPLRGLFL 9
+HP++GL L
Sbjct: 211 EHPVKGLSL 219


>sp|CREN1_PYRCJ|CRENACTIN calidifontis (strain DSM 21063

Query: 5 RGLFLR 10
RGLFLR
Sbjct: 39 RGLFLR 44


>sp|SPSS_METTH|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 HPLRGLFL 9
HP +G FL
Sbjct: 323 HPRKGFFL 330


>sp|FUMC_METAC|FUMARATE hydratase class II|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QHPLRGLF 8
+H LRGL+
Sbjct: 228 KHSLRGLY 235


>sp|SYS_HYPBU|SERINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 QHPLRGLF 8
+HPL GL+
Sbjct: 257 EHPLAGLY 264


>sp|Y04A_METJA|UNCHARACTERIZED protein MJ0047.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HPLRGLFL 9
HP RGL L
Sbjct: 36 HPPRGLIL 43




30|Sequence|146|155|GLFLRNYLLQ

>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LFLRNYLLQ 10
LF+RNY+++
Sbjct: 983 LFMRNYVVE 991


>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GLFLRNYL 8
G +LRNYL
Sbjct: 474 GDYLRNYL 481


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GLFLRNYL 8
G +LRNYL
Sbjct: 476 GDYLRNYL 483


>sp|OFOA2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Sulfurisphaera tokodaii (strain DSM

Query: 1 GLFLRNYLLQ 10
G+F NY+L+
Sbjct: 587 GIFATNYILK 596


>sp|Y2365_ARCFU|IRON-SULFUR cluster assembly SufBD family|Archaeoglobus fulgidus (strain ATCC

Query: 1 GLFLRNYLL 9
G F+ NY+L
Sbjct: 190 GTFISNYIL 198


>sp|HJE_SULAC|CROSSOVER junction endodeoxyribonuclease Hje|Sulfolobus acidocaldarius

Query: 2 LFLRNYLLQ 10
+FL NY+ Q
Sbjct: 115 IFLENYISQ 123


>sp|PCP_PYRFU|PYRROLIDONE-CARBOXYLATE peptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GLFLRNYLL 9
GL+L NY++
Sbjct: 138 GLYLCNYVM 146


>sp|RNFA_METAC|ION-TRANSLOCATING oxidoreductase complex subunit A|Methanosarcina acetivorans

Query: 1 GLFLRNYLL 9
G+F++N+LL
Sbjct: 15 GVFIKNFLL 23




31|Sequence|151|160|NYLLQCTRNI

>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 NYLLQCTRNI 10
+YL CTR I
Sbjct: 799 DYLFSCTRFI 808


>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 2 YLLQCT 7
YLLQC+
Sbjct: 160 YLLQCS 165


>sp|SFSA_PYRFU|SUGAR fermentation stimulation protein homolog|Pyrococcus furiosus

Query: 1 NYLLQCTR 8
+YLL+C++
Sbjct: 117 DYLLECSK 124


>sp|Y528_PYRFU|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus furiosus (strain

Query: 2 YLLQCTR 8
YLL+C R
Sbjct: 200 YLLECDR 206


>sp|ADEC_METTP|ADENINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 NYLLQCTRNI 10
+YLL+C I
Sbjct: 114 SYLLRCAEGI 123


>sp|Y401_METMA|UPF0228 protein MM_0401|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NYLLQCTRNI 10
NY + C NI
Sbjct: 57 NYTIDCNSNI 66




32|Sequence|156|165|CTRNILPDEG

>sp|LCAO_UNCAR|LONG-CHAIN alcohol oxidase|Uncultured marine euryarchaeote

Query: 1 CTRNILPDE 9
C R +LPD+
Sbjct: 367 CVRRVLPDD 375


>sp|SYH_METHJ|HISTIDINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 TRNILPDE 9
TR++LPDE
Sbjct: 8 TRDMLPDE 15


>sp|SYH_METPE|HISTIDINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 TRNILPDE 9
TR+ LPDE
Sbjct: 8 TRDFLPDE 15


>sp|SYH_METB6|HISTIDINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 TRNILPDE 9
TR+ LPDE
Sbjct: 8 TRDFLPDE 15


>sp|SYH_ARCFU|HISTIDINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TRNILPDE 9
TR+ LPDE
Sbjct: 9 TRDFLPDE 16


>sp|CAS6L_PYRHO|PUTATIVE CRISPR-associated endoribonuclease-like protein Cas6nc|Pyrococcus

Query: 3 RNILPDEG 10
R ILPD+G
Sbjct: 60 RKILPDKG 67


>sp|SYY_HALMA|TYROSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 TRNILPDEG 10
+R ILPD G
Sbjct: 191 SREILPDHG 199


>sp|RQCH_METJA|ARCHAEAL Rqc2 homolog aRqcH|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TRNILPDE 9
TRNI+P E
Sbjct: 147 TRNIVPKE 154


>sp|SYT_THEGJ|THREONINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 TRNILPDEG 10
+R I+P+EG
Sbjct: 136 SRTIVPEEG 144


>sp|SYH_THEKO|HISTIDINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 TRNILPDE 9
TR++LP+E
Sbjct: 10 TRDLLPEE 17


>sp|Y625_METJA|UNCHARACTERIZED ATP-binding protein MJ0625|Methanocaldococcus jannaschii (strain

Query: 3 RNILPDEG 10
RNIL +EG
Sbjct: 207 RNILKEEG 214


>sp|Y3526_METJA|UNCHARACTERIZED ATP-binding protein MJECL26|Methanocaldococcus jannaschii (strain

Query: 3 RNILPDEG 10
RNIL +EG
Sbjct: 211 RNILKEEG 218


>sp|Y1006_METJA|UNCHARACTERIZED ATP-binding protein MJ1006|Methanocaldococcus jannaschii (strain

Query: 3 RNILPDEG 10
RNIL +EG
Sbjct: 229 RNILKEEG 236


>sp|Y453_METAC|UNCHARACTERIZED glycosyltransferase MA_0453|Methanosarcina acetivorans (strain ATCC

Query: 1 CTRNILPDE 9
C R +L DE
Sbjct: 336 CIREVLEDE 344


>sp|Y1110_METTH|UNCHARACTERIZED protein MTH_1110|Methanothermobacter thermautotrophicus (strain

Query: 4 NILPDEG 10
NIL DEG
Sbjct: 62 NILADEG 68


>sp|GLYA_METKA|SERINE hydroxymethyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 CTRNILP 7
C +N+LP
Sbjct: 339 CNKNLLP 345


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 TRNILPDE 9
T NILP++
Sbjct: 561 TNNILPEQ 568


>sp|SYH_METMJ|HISTIDINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 TRNILPD 8
TR+ LPD
Sbjct: 8 TRDFLPD 14


>sp|NTPTH_METKA|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Methanopyrus kandleri (strain AV19 /

Query: 2 TRNILPDEG 10
RN+L +EG
Sbjct: 22 VRNVLEEEG 30




33|Sequence|161|170|LPDEGEPTDE

>sp|Y4416_NATPD|DNA-BINDING protein NP_4416A|Natronomonas pharaonis (strain ATCC 35678

Query: 5 GEPTDE 10
GEPTDE
Sbjct: 3 GEPTDE 8


>sp|RL3_HALSA|LARGE ribosomal subunit protein uL3|Halobacterium salinarum (strain ATCC

Query: 1 LPDEGEPTDE 10
+PDEG TDE
Sbjct: 116 VPDEGGDTDE 125


>sp|RL3_HALS3|LARGE ribosomal subunit protein uL3|Halobacterium salinarum (strain ATCC

Query: 1 LPDEGEPTDE 10
+PDEG TDE
Sbjct: 116 VPDEGGDTDE 125


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 EGEPTDE 10
EGEP DE
Sbjct: 105 EGEPVDE 111


>sp|PYRK_METBF|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanosarcina barkeri

Query: 1 LPDEGEPT 8
LP EGE T
Sbjct: 89 LPSEGEKT 96


>sp|QUEC_AERPE|7-CYANO-7-DEAZAGUANINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PDEGEP 7
PD GEP
Sbjct: 146 PDTGEP 151




34|Sequence|166|175|EPTDEETTGD

>sp|SALAC_HALSA|SALACTIN salinarum (strain ATCC 700922

Query: 2 PTDEETTG 9
P DEETTG
Sbjct: 90 PEDEETTG 97


>sp|RS2_HALMA|SMALL ribosomal subunit protein uS2|Haloarcula marismortui (strain ATCC

Query: 1 EPTDEETTGD 10
EPTD+E+ D
Sbjct: 48 EPTDDESEAD 57




35|Sequence|171|180|ETTGDISDSM

>sp|THIC_HALSA|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ETTGDISDSM 10
+TTGDI D +
Sbjct: 72 DTTGDIDDEL 81


>sp|THIC_HALS3|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 ETTGDISDSM 10
+TTGDI D +
Sbjct: 72 DTTGDIDDEL 81


>sp|Y779_METJA|UNCHARACTERIZED protein MJ0779|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GDISDSM 10
GD+SDS+
Sbjct: 168 GDLSDSL 174


>sp|Y450_METJA|UNCHARACTERIZED protein MJ0450|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TTGDISDS 9
T+GDISD
Sbjct: 149 TSGDISDK 156


>sp|GFCR_METS3|TRANSCRIPTIONAL regulator GfcR|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 TTGDISDSM 10
TTG+I+D +
Sbjct: 18 TTGEIADEL 26




36|Sequence|176|185|ISDSMDFVLL

>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 ISDSMDFVL 9
+S MDFVL
Sbjct: 492 VSHDMDFVL 500


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 ISDSMDFVLL 10
+SD+MD V++
Sbjct: 447 LSDTMDLVVV 456


>sp|PCNA_THEVO|DNA polymerase sliding clamp|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ISDSMDFVL 9
ISDS+ FVL
Sbjct: 146 ISDSIRFVL 154


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 1 ISDSMDFVLL 10
+SD +DFV L
Sbjct: 339 VSDDVDFVEL 348




37|Sequence|181|190|DFVLLNFAEM

>sp|APGM_METPE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosphaerula palustris (strain ATCC

Query: 1 DFVLLN 6
DFVLLN
Sbjct: 297 DFVLLN 302


>sp|CAS3_METJA|PUTATIVE CRISPR-associated nuclease/helicase Cas3|Methanocaldococcus

Query: 1 DFVLLNFAE 9
DF LNF+E
Sbjct: 161 DFASLNFSE 169




38|Sequence|186|195|NFAEMNKLWV

>sp|NADM_AERPE|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 5 MNKLWV 10
MNK+WV
Sbjct: 81 MNKVWV 86


>sp|OTC_THEKO|ORNITHINE carbamoyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 3 AEMNKLW 9
AEM K+W
Sbjct: 28 AEMMKIW 34


>sp|TRPF_SACS2|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NFAEMNKLWV 10
NF ++N W+
Sbjct: 162 NFIDLNPAWL 171


>sp|Y2171_ARCFU|UNCHARACTERIZED protein AF_2171|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NFAEMNKLW 9
NF N LW
Sbjct: 176 NFGHYNYLW 184


>sp|PYRH_SULAC|URIDYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NFAEMNKL 8
NF ++NKL
Sbjct: 203 NFKDLNKL 210


>sp|Y1724_ARCFU|UNCHARACTERIZED protein AF_1724|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NFAEMNKLW 9
NFAE K W
Sbjct: 77 NFAERLKRW 85




39|Sequence|191|200|NKLWVRMQHQ

>sp|FOLD_METBU|BIFUNCTIONAL protein FolD|Methanococcoides burtonii (strain DSM 6242

Query: 1 NKLWVRMQHQ 10
+K++VR++H+
Sbjct: 51 SKMYVRLKHK 60


>sp|FOLD_METMJ|BIFUNCTIONAL protein FolD|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 NKLWVRMQHQ 10
++++VRM+H+
Sbjct: 40 SQMYVRMKHR 49


>sp|FOLD_METB6|BIFUNCTIONAL protein FolD|Methanoregula boonei (strain DSM 21154

Query: 1 NKLWVRMQHQ 10
++++VRM+H+
Sbjct: 42 SQMYVRMKHR 51


>sp|FOLD_METMA|BIFUNCTIONAL protein FolD|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NKLWVRMQHQ 10
+K++VR++H+
Sbjct: 52 SKMYVRLKHR 61


>sp|FOLD_METBF|BIFUNCTIONAL protein FolD|Methanosarcina barkeri (strain Fusaro /

Query: 1 NKLWVRMQHQ 10
+K++VR++H+
Sbjct: 52 SKMYVRLKHR 61


>sp|FOLD_METAC|BIFUNCTIONAL protein FolD|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NKLWVRMQHQ 10
+K++VR++H+
Sbjct: 52 SKMYVRLKHR 61


>sp|IXTPA_THEAC|DITP/XTP pyrophosphatase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 WVRMQHQ 10
WVRM+++
Sbjct: 28 WVRMKYE 34


>sp|SYE_NITMS|GLUTAMATE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 NKLWVRMQHQ 10
NK W +MQ++
Sbjct: 223 NKNWEKMQNK 232




40|Sequence|196|205|RMQHQGHSRD

>sp|DAPB_METBU|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcoides burtonii (strain DSM 6242

Query: 2 MQHQGHSRD 10
++HQ HSR+
Sbjct: 226 IKHQAHSRN 234


>sp|Y078_THEAC|UPF0284 protein Ta0078|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RMQHQGHSRD 10
R+ +QGH R+
Sbjct: 298 RLYNQGHVRE 307


>sp|Y330_METJA|UNCHARACTERIZED protein MJ0330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 HQGHSR 9
H GHSR
Sbjct: 186 HSGHSR 191


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 4 HQGHSR 9
H GHSR
Sbjct: 117 HAGHSR 122


>sp|ADHS_METTH|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 RMQHQGHSRD 10
R H+G+ RD
Sbjct: 62 RSGHRGYGRD 71




41|Sequence|201|210|GHSRDREKRE

>sp|AGLB1_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GHSRDRE 7
GH+RDR+
Sbjct: 535 GHARDRD 541


>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GHSRDRE 7
GH+RDR+
Sbjct: 533 GHARDRD 539


>sp|HIS1_METJA|ATP phosphoribosyltransferase|Methanocaldococcus jannaschii (strain

Query: 4 RDREKRE 10
+D+EKRE
Sbjct: 192 KDKEKRE 198


>sp|Y1859_ARCFU|UNCHARACTERIZED protein AF_1859|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HSRDREKR 9
++RDR+KR
Sbjct: 64 YTRDRQKR 71


>sp|TRM56_METKA|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanopyrus kandleri

Query: 1 GHSRDREKR 9
GH R+R+KR
Sbjct: 13 GHRRERDKR 21


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 2 HSRDREKR 9
HS+D EKR
Sbjct: 418 HSQDYEKR 425


>sp|PURT_THEKO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Thermococcus

Query: 2 HSRDREKR 9
HS+D EKR
Sbjct: 418 HSQDYEKR 425


>sp|FAU1_STAMF|PROBABLE ribonuclease FAU-1|Staphylothermus marinus (strain ATCC 43588

Query: 2 HSRDREKRE 10
H RD +KRE
Sbjct: 171 HIRDHDKRE 179


>sp|AATD_METST|A-TYPE ATP synthase subunit D|Methanosphaera stadtmanae (strain ATCC

Query: 1 GHSRDREKRE 10
GHS +EKR+
Sbjct: 29 GHSLLKEKRD 38


>sp|XAD_HALVD|D-XYLONATE dehydratase|Haloferax volcanii (strain ATCC 29605

Query: 1 GHSRDREKR 9
GH +DR R
Sbjct: 192 GHEKDRANR 200


>sp|TRM56_IGNH4|TRNA (cytidine(56)-2'-O)-methyltransferase|Ignicoccus hospitalis

Query: 1 GHSRDREKR 9
GH DR+KR
Sbjct: 9 GHRPDRDKR 17




42|Sequence|206|215|REKRERERQE

>sp|DADD_METB6|5'-DEOXYADENOSINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 2 EKRERE 7
EKRERE
Sbjct: 162 EKRERE 167


>sp|GLYA_METBF|SERINE hydroxymethyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 3 KRERERQE 10
K+E ERQE
Sbjct: 16 KKEAERQE 23


>sp|LONB_THEVO|ARCHAEAL Lon protease|Thermoplasma volcanium (strain ATCC 51530

Query: 1 REKRERER 8
REKR+R R
Sbjct: 117 REKRDRSR 124


>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 REKRERER 8
REKR+R R
Sbjct: 117 REKRDRSR 124




43|Sequence|211|220|RERQELRILV

>sp|NTPTH_PYRAE|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RERQELRI 8
RER ELRI
Sbjct: 4 RERAELRI 11




44|Sequence|216|225|LRILVGTNLV

>sp|TRM1_THEKO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus kodakarensis

Query: 1 LRILVGT 7
LRIL+GT
Sbjct: 197 LRILIGT 203


>sp|TRM1_THEON|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus onnurineus

Query: 1 LRILVGT 7
LRIL+GT
Sbjct: 197 LRILIGT 203


>sp|TRM1_THEGJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus gammatolerans

Query: 1 LRILVGT 7
LRIL+GT
Sbjct: 198 LRILIGT 204


>sp|UVRB_NATPD|UVRABC system protein B|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LRILVGTNLV 10
+++LVG NL+
Sbjct: 507 IQVLVGINLL 516


>sp|LYSY_CALMQ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 LRILVGTNLV 10
++ +VGTN+V
Sbjct: 291 VKYVVGTNMV 300


>sp|Y1196_METJA|PUTATIVE amino-acid transporter MJ1196|Methanocaldococcus jannaschii (strain

Query: 1 LRILVGTNL 9
L+IL+G NL
Sbjct: 238 LKILIGDNL 246




45|Sequence|221|230|GTNLVRLSQL

>sp|SYT_CALMQ|THREONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 GTNLVRLS 8
GTN+ RLS
Sbjct: 254 GTNMFRLS 261




46|Sequence|226|235|RLSQLEGVNV

>sp|TRPB_HALVD|TRYPTOPHAN synthase beta chain|Haloferax volcanii (strain ATCC 29605

Query: 1 RLSQLEGV 8
RLSQ+EG+
Sbjct: 344 RLSQMEGI 351


>sp|HPCAL_NITMS|3-HYDROXYPROPIONATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 1 RLSQLEGVNV 10
RLS+ +GVNV
Sbjct: 96 RLSKKKGVNV 105


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LSQLEGVNV 10
LS++EG+N+
Sbjct: 803 LSRIEGINI 811


>sp|EF1A_METB6|ELONGATION factor 1-alpha|Methanoregula boonei (strain DSM 21154

Query: 2 LSQLEGVNV 10
+S L+G+N+
Sbjct: 184 ISSLQGINI 192




47|Sequence|231|240|EGVNVERYKQ

>sp|Y614A_NATPD|UNCHARACTERIZED protein NP_0614A|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EGVNVERYKQ 10
EG+ + RYKQ
Sbjct: 23 EGLILSRYKQ 32


>sp|TRPA_METMA|TRYPTOPHAN synthase alpha chain|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EGVNVERY 8
EG+++ERY
Sbjct: 84 EGMDIERY 91


>sp|EF2_METMT|ELONGATION factor 2|Methanococcoides methylutens

Query: 1 EGVNVERYKQ 10
+G+N ERY Q
Sbjct: 180 KGMNEERYNQ 189


>sp|SYS_HALMA|SERINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 EGVNVERYKQ 10
E NVERY++
Sbjct: 120 EADNVERYRE 129


>sp|Y1986_AERPE|UNCHARACTERIZED protein APE_1986.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 GVNVER 7
GVNVER
Sbjct: 114 GVNVER 119


>sp|FER_METAC|FERREDOXIN acetivorans (strain ATCC 35395

Query: 3 VNVERYK 9
VN+ RYK
Sbjct: 47 VNINRYK 53


>sp|SYTC_SULAC|THREONINE--TRNA ligase catalytic subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 2 GVNVERYKQ 10
G+NVE++ Q
Sbjct: 521 GINVEKFVQ 529


>sp|ASPG_PYRFU|L-ASPARAGINASE furiosus (strain ATCC 43587

Query: 1 EGVNVERYK 9
+GV++ RYK
Sbjct: 266 DGVDLTRYK 274


>sp|IF2P_SACS2|PROBABLE translation initiation factor IF-2|Saccharolobus solfataricus

Query: 5 VERYKQ 10
VERYKQ
Sbjct: 339 VERYKQ 344


>sp|PSB_HALLT|PROTEASOME subunit beta|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 EGVNVERYK 9
+GV++ RYK
Sbjct: 229 DGVDITRYK 237


>sp|APE1_SULTO|PROBABLE aminopeptidase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 VNVERYK 9
VNVERY+
Sbjct: 2 VNVERYE 8


>sp|RADB_METBU|DNA repair and recombination protein|Methanococcoides burtonii

Query: 1 EGVNVERYKQ 10
EG++ +R+KQ
Sbjct: 63 EGLSADRFKQ 72


>sp|Y872_METJA|UNCHARACTERIZED lipoprotein MJ0872|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GVNVERYKQ 10
GVNV RY +
Sbjct: 49 GVNVVRYAE 57




48|Sequence|236|245|ERYKQIVLTG

>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 1 ERYKQIVLTG 10
E YK I++TG
Sbjct: 493 EAYKNIIVTG 502


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ERYKQIVLTG 10
E+Y+++ LTG
Sbjct: 1122 EKYRRVPLTG 1131


>sp|EF1A_IGNH4|ELONGATION factor 1-alpha|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 ERYKQIVLT 9
+RYKQIV T
Sbjct: 166 KRYKQIVET 174


>sp|HISX_METTH|HISTIDINOL dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 ERYKQIVLTG 10
ERY IVLT
Sbjct: 299 ERYGMIVLTA 308


>sp|PGK2_METJA|2-PHOSPHOGLYCERATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ERYKQIVLTG 10
ER+ + VLTG
Sbjct: 167 ERHSEAVLTG 176


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 ERYKQIVLTG 10
ERY++ LTG
Sbjct: 1057 ERYRRPPLTG 1066


>sp|ARGC_METJA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ERYKQIVLTG 10
E+YK + TG
Sbjct: 53 EKYKNLCFTG 62


>sp|Y1055_METJA|UNCHARACTERIZED protein MJ1055|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RYKQIVLTG 10
+YK I++TG
Sbjct: 2 KYKNILVTG 10


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ERYKQIV 7
E YKQIV
Sbjct: 1199 ENYKQIV 1205




49|Sequence|241|250|IVLTGILEQV

>sp|FOLCP_HALVD|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 1 IVLTGILEQ 9
+VLTG L+Q
Sbjct: 503 VVLTGTLDQ 511


>sp|PDXS_HALSA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Halobacterium salinarum

Query: 3 LTGILEQV 10
LTGI+E+V
Sbjct: 75 LTGIIEEV 82


>sp|PDXS_HALS3|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Halobacterium salinarum

Query: 3 LTGILEQV 10
LTGI+E+V
Sbjct: 75 LTGIIEEV 82


>sp|TMCA_THES3|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus sp. (strain AM4)

Query: 2 VLTGILEQV 10
VL+GILE++
Sbjct: 67 VLSGILEEL 75


>sp|DNLI_CENSY|DNA ligase|Cenarchaeum symbiosum (strain A)

Query: 3 LTGILEQV 10
LTGILE++
Sbjct: 22 LTGILEEL 29


>sp|QUEC_SACS2|7-CYANO-7-DEAZAGUANINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LTGILEQV 10
L GILEQ+
Sbjct: 150 LKGILEQI 157


>sp|ARLY_METBF|ARGININOSUCCINATE lyase|Methanosarcina barkeri (strain Fusaro /

Query: 3 LTGILEQV 10
LTG+LE++
Sbjct: 124 LTGLLEEI 131




50|Sequence|246|255|ILEQVVNCRD

>sp|MCRC_METVA|METHYL-COENZYME M reductase operon protein|Methanococcus vannielii

Query: 3 EQVVNCR 9
EQ+V+CR
Sbjct: 7 EQIVDCR 13


>sp|MCRC_METJA|METHYL-COENZYME M reductase I operon|Methanocaldococcus jannaschii (strain ATCC

Query: 3 EQVVNCR 9
EQ+V+CR
Sbjct: 7 EQIVDCR 13


>sp|LIPA_METAR|LIPOYL synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 ILEQVVNCR 9
+LEQVV+ R
Sbjct: 149 LLEQVVDAR 157


>sp|NASC_HALMT|PROBABLE molybdenum cofactor guanylyltransferase|Haloferax mediterranei

Query: 3 EQVVNCR 9
E V+NCR
Sbjct: 55 ELVINCR 61


>sp|KPYK_PYRAE|PYRUVATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LEQVVNCRD 10
LE++V C D
Sbjct: 240 LEELVQCSD 248


>sp|PURP_PYRIL|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 LEQVVNCR 9
+E+VV CR
Sbjct: 253 VEEVVGCR 260


>sp|CIMA_METTH|PUTATIVE (R)-citramalate synthase CimA|Methanothermobacter

Query: 1 ILEQVVNCRD 10
+LEQ V+C +
Sbjct: 112 VLEQAVDCTE 121


>sp|GSA_SULAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ILEQVVNCRD 10
ILE++VN D
Sbjct: 325 ILEELVNALD 334




51|Sequence|251|260|VNCRDALAQE

>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 2 NCRDALAQ 9
NC D LAQ
Sbjct: 421 NCLDVLAQ 428


>sp|LHRC_METJA|ATP-DEPENDENT helicase Lhr-Core|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NCRDALAQ 9
NC D LAQ
Sbjct: 413 NCLDVLAQ 420


>sp|DNLI_METHJ|DNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 NCRDALAQ 9
N RDA+AQ
Sbjct: 170 NLRDAIAQ 177




52|Sequence|256|265|ALAQEYLMEC

>sp|IF2P_METS3|PROBABLE translation initiation factor IF-2|Methanobrevibacter smithii

Query: 1 ALAQEYLME 9
LAQEYL E
Sbjct: 214 GLAQEYLTE 222


>sp|Y528_PYRFU|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus furiosus (strain

Query: 5 EYLMEC 10
EYL+EC
Sbjct: 199 EYLLEC 204


>sp|IF2P_METTH|PROBABLE translation initiation factor IF-2|Methanothermobacter

Query: 1 ALAQEYLME 9
LAQ+YL E
Sbjct: 214 GLAQQYLRE 222


>sp|PYRK_ARCFU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Archaeoglobus fulgidus

Query: 5 EYLMEC 10
EYLM+C
Sbjct: 107 EYLMKC 112


>sp|SYW1_HALSA|TRYPTOPHAN--TRNA ligase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 ALAQEYLMEC 10
ALA+E EC
Sbjct: 456 ALAEEVYAEC 465




53|Sequence|261|270|YLMECIIQVF

>sp|PUS10_AERPE|TRNA pseudouridine synthase Pus10|Aeropyrum pernix (strain ATCC 700893

Query: 2 LMECIIQ 8
LMECI++
Sbjct: 382 LMECILE 388


>sp|NIFE_METTM|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 2 LMECIIQV 9
L+ECI+++
Sbjct: 131 LLECILEI 138


>sp|HUTH_THEVO|PROBABLE histidine ammonia-lyase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YLMECIIQVF 10
Y + CI QV+
Sbjct: 277 YTLRCIPQVY 286


>sp|HUTH_THEAC|PROBABLE histidine ammonia-lyase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YLMECIIQVF 10
Y + CI QV+
Sbjct: 277 YTLRCIPQVY 286


>sp|PRIS_SULTO|DNA primase small subunit PriS|Sulfurisphaera tokodaii (strain DSM

Query: 4 ECIIQVF 10
ECI++VF
Sbjct: 136 ECIMKVF 142




54|Sequence|266|275|IIQVFPDEFH

>sp|CARB1_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 2 IQVFPDEFH 10
IQ PDEF+
Sbjct: 250 IQTLPDEFY 258


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 1 IIQVFPDEFH 10
I+ V PD FH
Sbjct: 558 ILNVTPDSFH 567


>sp|MT872_AERPE|DNA (cytosine-5-)-methyltransferase M.ApeKI|Aeropyrum pernix (strain

Query: 2 IQVFPDEF 9
+Q FPD F
Sbjct: 426 LQTFPDSF 433


>sp|RL18_PYRFU|LARGE ribosomal subunit protein uL18|Pyrococcus furiosus (strain ATCC

Query: 3 QVFPDEF 9
++FPDE+
Sbjct: 136 EIFPDEY 142


>sp|CHEB_HALSA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Halobacterium

Query: 1 IIQVFPDEF 9
I+Q PD+F
Sbjct: 188 IVQHMPDQF 196


>sp|CHEB_HALS3|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Halobacterium

Query: 1 IIQVFPDEF 9
I+Q PD+F
Sbjct: 188 IVQHMPDQF 196


>sp|UVRB_METBU|UVRABC system protein B|Methanococcoides burtonii (strain DSM 6242

Query: 1 IIQVFPDEF 9
+++ FPD+F
Sbjct: 326 LLEFFPDDF 334


>sp|HMEB_ARCFU|HDR-LIKE menaquinol oxidoreductase integral membrane|Archaeoglobus fulgidus

Query: 3 QVFPDEF 9
QVFP+E+
Sbjct: 328 QVFPEEY 334


>sp|Y529_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0529|Methanocaldococcus

Query: 1 IIQVFPDE 8
IIQVFP +
Sbjct: 207 IIQVFPKD 214


>sp|RS17E_PYRAE|SMALL ribosomal subunit protein eS17|Pyrobaculum aerophilum (strain

Query: 1 IIQVFPDEF 9
+++++PD+F
Sbjct: 16 LLEMYPDKF 24


>sp|GUAAA_METBU|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcoides

Query: 2 IQVFPDEF 9
+ V PDEF
Sbjct: 132 VTVLPDEF 139


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IQVFPDEF 9
+ +FP+EF
Sbjct: 609 VAIFPEEF 616


>sp|UVRB_HALSA|UVRABC system protein B|Halobacterium salinarum (strain ATCC 700922

Query: 1 IIQVFPDEF 9
++ FPD+F
Sbjct: 338 LLDYFPDDF 346


>sp|Y1257_METJA|UNCHARACTERIZED protein MJ1257|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IQVFPDEFH 10
I +F DEF+
Sbjct: 156 ISIFQDEFN 164




55|Sequence|271|280|PDEFHLQTLN

>sp|CAPPA_ARCFU|PHOSPHOENOLPYRUVATE carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PDEFHLQTLN 10
PDE HL+ N
Sbjct: 437 PDERHLEKTN 446


>sp|LEUC_PYRAR|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PDEFHLQTLN 10
P E HL T N
Sbjct: 366 PGEVHLTTSN 375


>sp|RIBA_PICTO|GTP cyclohydrolase-2|Picrophilus torridus (strain ATCC 700027

Query: 2 DEFHLQT 8
DEF+L+T
Sbjct: 177 DEFYLET 183




56|Sequence|276|285|LQTLNPFLRA

>sp|CP119_SULAC|CYTOCHROME P450 119|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LQTLNPFLR 9
LQTL F+R
Sbjct: 92 LQTLETFIR 100




57|Sequence|281|290|PFLRACAELH

>sp|HEM1_METTM|GLUTAMYL-TRNA reductase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 FLRACAEL 9
FLR C+EL
Sbjct: 385 FLRMCSEL 392


>sp|MOAA_METKA|PROBABLE GTP 3',8-cyclase|Methanopyrus kandleri (strain AV19 /

Query: 2 FLRACAEL 9
LRACAE+
Sbjct: 47 LLRACAEI 54


>sp|SYK_HALMA|LYSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PFLRACAE 8
PFL CAE
Sbjct: 193 PFLPQCAE 200


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PFLRACAELH 10
PFL A ++H
Sbjct: 157 PFLEAVRQMH 166


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PFLRACAELH 10
PFL A ++H
Sbjct: 152 PFLEAVRQMH 161


>sp|PYRG_METLZ|CTP synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 PFLRACAELH 10
PFL A ++H
Sbjct: 158 PFLEAVRQMH 167


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PFLRACAELH 10
PFL A ++H
Sbjct: 152 PFLEAVRQMH 161


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PFLRACAELH 10
PFL A ++H
Sbjct: 152 PFLEAVRQMH 161


>sp|MPGP_AERPE|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PFLRACAEL 9
P LR CA++
Sbjct: 205 PLLRPCAKV 213


>sp|PYRG_ARCFU|CTP synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PFLRACAELH 10
PFL A ++H
Sbjct: 152 PFLEAIRQMH 161


>sp|PDXS_PYRAR|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum arsenaticum (strain

Query: 1 PFLRACAEL 9
PF+ C EL
Sbjct: 165 PFVNGCREL 173


>sp|PYRK_METKA|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanopyrus kandleri

Query: 1 PFLRACAEL 9
PF CA+L
Sbjct: 71 PFTERCADL 79




58|Sequence|286|295|CAELHQNVNV

>sp|TBP_SACSH|TATA-BOX-BINDING protein|Saccharolobus shibatae (strain ATCC 51178

Query: 2 AELHQNVNV 10
A LH NVN+
Sbjct: 112 ANLHVNVNL 120


>sp|TBP_SACS2|TATA-BOX-BINDING protein|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 AELHQNVNV 10
A LH NVN+
Sbjct: 112 ANLHVNVNL 120


>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 2 AELHQNVNV 10
AE+ +NVNV
Sbjct: 305 AEIGKNVNV 313


>sp|Y1524_METJA|UPF0166 protein MJ1524|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CAELHQNVN 9
C ++ +N+N
Sbjct: 70 CVDIEENIN 78




59|Sequence|291|300|QNVNVKNIII

>sp|SYT_METVS|THREONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 NVNVKNIII 10
N+NVKNI++
Sbjct: 67 NLNVKNIVV 75


>sp|TRUD2_METMP|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain DSM

Query: 1 QNVNVKNIII 10
+N+N+K+I+I
Sbjct: 113 ENINIKDIVI 122


>sp|TRUD_METM5|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain C5

Query: 1 QNVNVKNIII 10
+N+N+K+I+I
Sbjct: 113 ENINIKDIVI 122


>sp|IF2G_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 3 VNVKNIII 10
VN+KN+II
Sbjct: 139 VNIKNLII 146




60|Sequence|296|305|KNIIIALIDR

>sp|ENDA_THEGJ|TRNA-SPLICING endonuclease|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KNIIIALID 9
KN+I+A++D
Sbjct: 145 KNMIMAIVD 153


>sp|RFCS_METAR|REPLICATION factor C small subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 KNIIIALIDR 10
+++++AL+DR
Sbjct: 279 EDVLVALVDR 288


>sp|ENDA_THEKO|TRNA-SPLICING endonuclease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KNIIIALID 9
KN+I+A++D
Sbjct: 145 KNMIMAIVD 153


>sp|IF2G_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 1 KNIIIAL 7
KNI+IAL
Sbjct: 138 KNIVIAL 144


>sp|ENDA_PYRHO|TRNA-SPLICING endonuclease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KNIIIALID 9
KN+++A++D
Sbjct: 147 KNMVLAIVD 155




61|Sequence|301|310|ALIDRLALFA

>sp|SYFA_PYRFU|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 IDRLALF 9
IDRLA+F
Sbjct: 468 IDRLAMF 474


>sp|SYFA_THESM|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus sibiricus (strain DSM 12597

Query: 3 IDRLALF 9
IDRLA+F
Sbjct: 472 IDRLAMF 478


>sp|SYFA_THEON|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus onnurineus (strain NA1)

Query: 3 IDRLALF 9
IDRLA+F
Sbjct: 469 IDRLAMF 475


>sp|SYFA_PYRHO|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 IDRLALF 9
IDRLA+F
Sbjct: 468 IDRLAMF 474


>sp|SYFA_THEGJ|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 3 IDRLALF 9
IDRLA+F
Sbjct: 468 IDRLAMF 474


>sp|SYFA_THEKO|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 IDRLALF 9
IDRLA+F
Sbjct: 470 IDRLAMF 476


>sp|SYFA_PYRAB|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 IDRLALF 9
IDRLA+F
Sbjct: 469 IDRLAMF 475




62|Sequence|306|315|LALFAHREDG

>sp|Y085_ARCFU|UNCHARACTERIZED protein AF_0085|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LALFAHREDG 10
LA+F R+DG
Sbjct: 69 LAIFTLRKDG 78


>sp|NIFD_METBA|NITROGENASE molybdenum-iron protein alpha chain|Methanosarcina barkeri

Query: 4 FAHRED 9
FAHR+D
Sbjct: 378 FAHRDD 383


>sp|PSTB2_NATPD|PHOSPHATE import ATP-binding protein PstB|Natronomonas pharaonis (strain

Query: 1 LALFAHREDG 10
LALF+ +DG
Sbjct: 81 LALFSEPDDG 90




63|Sequence|311|320|HREDGPGIPA

>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 HREDGPGIP 9
H+++GPGIP
Sbjct: 78 HQDNGPGIP 86


>sp|PROA_METBU|GAMMA-GLUTAMYL phosphate reductase|Methanococcoides burtonii (strain DSM 6242

Query: 3 EDGPGIP 9
ED PGIP
Sbjct: 171 EDTPGIP 177


>sp|TOP6B_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 3 EDGPGIP 9
++GPGIP
Sbjct: 80 DNGPGIP 86


>sp|GCSPB_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 REDGPGIPA 10
RE+GP +P+
Sbjct: 49 RENGPNLPS 57


>sp|GCSPB_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 REDGPGIPA 10
RE+GP +P+
Sbjct: 49 RENGPNLPS 57


>sp|GCSPB_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 REDGPGIPA 10
RE+GP +P+
Sbjct: 49 RENGPNLPS 57


>sp|GCSPB_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 REDGPGIPA 10
RE+GP +P+
Sbjct: 49 RENGPNLPS 57


>sp|GCSPB_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 REDGPGIPA 10
RE+GP +P+
Sbjct: 49 RENGPNLPS 57


>sp|GCSPB_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 REDGPGIPA 10
RE+GP +P+
Sbjct: 49 RENGPNLPS 57


>sp|HMGCS_PICTO|HYDROXYMETHYLGLUTARYL-COA synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 HREDGPGI 8
HRE+ PG+
Sbjct: 315 HRENAPGV 322


>sp|AMT2_HALMT|AMMONIUM transporter Amt2|Haloferax mediterranei (strain ATCC 33500

Query: 2 REDGPGIP 9
R DG GIP
Sbjct: 437 RADGSGIP 444


>sp|TOP6B_THESM|TYPE 2 DNA topoisomerase 6|Thermococcus sibiricus (strain DSM 12597

Query: 3 EDGPGIP 9
++GPGIP
Sbjct: 80 DNGPGIP 86


>sp|DAPA_METTH|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 EDGPGIPA 10
ED PG PA
Sbjct: 272 EDAPGTPA 279


>sp|SYTC_METS5|THREONINE--TRNA ligase catalytic subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 HREDGPGI 8
H E GPG+
Sbjct: 149 HEESGPGL 156


>sp|TOP6B_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 EDGPGIP 9
++GPGIP
Sbjct: 78 DNGPGIP 84


>sp|TOP6B_PYRFU|TYPE 2 DNA topoisomerase 6|Pyrococcus furiosus (strain ATCC 43587

Query: 3 EDGPGIP 9
++GPGIP
Sbjct: 78 DNGPGIP 84


>sp|TOP6B_THEON|TYPE 2 DNA topoisomerase 6|Thermococcus onnurineus (strain NA1)

Query: 3 EDGPGIP 9
++GPGIP
Sbjct: 78 DNGPGIP 84


>sp|TOP6B_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 3 EDGPGIP 9
++GPGIP
Sbjct: 78 DNGPGIP 84


>sp|TOP6B_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 3 EDGPGIP 9
++GPGIP
Sbjct: 78 DNGPGIP 84


>sp|TOP6B_THEGJ|TYPE 2 DNA topoisomerase 6|Thermococcus gammatolerans (strain DSM

Query: 3 EDGPGIP 9
++GPGIP
Sbjct: 78 DNGPGIP 84


>sp|TOP6B_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EDGPGIP 9
++GPGIP
Sbjct: 71 DNGPGIP 77


>sp|Y1656_ARCFU|UNCHARACTERIZED protein AF_1656|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DGPGIP 9
D PGIP
Sbjct: 78 DAPGIP 83


>sp|Y1614_METAC|MACRO domain-containing protein MA_1614|Methanosarcina acetivorans

Query: 1 HREDGPGI 8
HR GPG+
Sbjct: 63 HRAAGPGL 70


>sp|ILVC_METB6|KETOL-ACID reductoisomerase (NADP(+))|Methanoregula boonei (strain DSM 21154

Query: 3 EDGPGIPA 10
E+G G+PA
Sbjct: 141 EEGKGVPA 148


>sp|GSA_METST|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 DGPGIP 9
D PGIP
Sbjct: 161 DSPGIP 166


>sp|ILVC_METLZ|KETOL-ACID reductoisomerase (NADP(+))|Methanocorpusculum labreanum (strain

Query: 3 EDGPGIPA 10
E+G G+PA
Sbjct: 141 EEGKGVPA 148


>sp|RPA_METTH|REPLICATION factor A|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 REDGPGI 8
REDG GI
Sbjct: 439 REDGTGI 445


>sp|ILVC_METMJ|KETOL-ACID reductoisomerase (NADP(+))|Methanoculleus marisnigri (strain ATCC

Query: 3 EDGPGIPA 10
E+G G+PA
Sbjct: 141 EEGKGVPA 148


>sp|ILVC_METPE|KETOL-ACID reductoisomerase (NADP(+))|Methanosphaerula palustris (strain ATCC

Query: 3 EDGPGIPA 10
E+G G+PA
Sbjct: 141 EEGKGVPA 148


>sp|SYP_HALWD|PROLINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 HREDGPGIPA 10
HR DG I A
Sbjct: 370 HRPDGESITA 379




64|Sequence|316|325|PGIPADIKLF

>sp|CAS3_METJA|PUTATIVE CRISPR-associated nuclease/helicase Cas3|Methanocaldococcus

Query: 3 IPADIKLF 10
IP+D+KLF
Sbjct: 606 IPSDLKLF 613


>sp|CSA3_METJA|CRISPR locus-related putative DNA-binding protein|Methanocaldococcus

Query: 1 PGIPADIKL 9
P IP DIKL
Sbjct: 139 PLIPPDIKL 147


>sp|Y516_METST|UPF0173 metal-dependent hydrolase Msp_0516|Methanosphaera stadtmanae

Query: 1 PGIPADIKLF 10
PGI D++LF
Sbjct: 200 PGIEQDVELF 209


>sp|GGR_METMJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GIPADIK 8
GIPADI+
Sbjct: 142 GIPADIR 148


>sp|DYRA_HALVD|DIHYDROFOLATE reductase HdrA|Haloferax volcanii (strain ATCC 29605

Query: 1 PGIPADIKLF 10
P IPAD K +
Sbjct: 24 PSIPADKKQY 33


>sp|TF2B2_THEVO|TRANSCRIPTION initiation factor IIB 2|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GIPADIK 8
GIP DIK
Sbjct: 140 GIPKDIK 146


>sp|TF2B2_THEAC|TRANSCRIPTION initiation factor IIB 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GIPADIK 8
GIP DIK
Sbjct: 134 GIPKDIK 140


>sp|Y2251_ARCFU|PROTEIN AF_2251|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PGIPADIK 8
PG+PA+++
Sbjct: 141 PGVPAEME 148


>sp|AROA_METMA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosarcina mazei (strain ATCC

Query: 1 PGIPADI 7
PGIP D+
Sbjct: 77 PGIPDDV 83


>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GIPADIKL 9
G+PADI L
Sbjct: 374 GMPADIVL 381


>sp|PCNA_METST|DNA polymerase sliding clamp|Methanosphaera stadtmanae (strain ATCC

Query: 1 PGIPADIKL 9
P IP DIK+
Sbjct: 124 PDIPYDIKI 132


>sp|METK_METBU|S-ADENOSYLMETHIONINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PGIPADIKL 9
PGI DIK+
Sbjct: 190 PGIGEDIKV 198


>sp|ENGB_HALWD|PROBABLE GTP-binding protein EngB|Haloquadratum walsbyi (strain DSM 16790

Query: 3 IPADIKLF 10
IP DI+LF
Sbjct: 118 IPHDIELF 125


>sp|VHUA_METVO|F420-NON-REDUCING hydrogenase vhu subunit A|Methanococcus voltae

Query: 2 GIPADIKL 9
G PAD+KL
Sbjct: 26 GKPADVKL 33


>sp|GSA_METST|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PGIPAD 6
PGIP D
Sbjct: 163 PGIPTD 168


>sp|GSA_METTH|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PGIPAD 6
PGIP D
Sbjct: 160 PGIPVD 165


>sp|PURE_METTH|PROBABLE N5-carboxyaminoimidazole ribonucleotide

Query: 2 GIPADIKL 9
G+P D+KL
Sbjct: 85 GVPVDVKL 92


>sp|Y1209_CALMQ|PROTEIN Cmaq_1209|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 PGIPADIK 8
PG+PA+++
Sbjct: 150 PGVPAEME 157


>sp|PURT_META3|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus aeolicus

Query: 2 GIPADIKL 9
G+P DI+L
Sbjct: 310 GLPVDIQL 317


>sp|MVHA_METTH|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter thermautotrophicus

Query: 1 PGIPADIKLF 10
PG+ D K+F
Sbjct: 420 PGVEVDDKIF 429


>sp|MVHA_METTM|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter marburgensis (strain ATCC

Query: 1 PGIPADIKLF 10
PG+ D K+F
Sbjct: 420 PGVEVDDKIF 429


>sp|DNLI_IGNH4|DNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 IPADIKLF 10
IP ++KLF
Sbjct: 342 IPVNVKLF 349


>sp|GUAAB_THEVO|GMP synthase [glutamine-hydrolyzing] subunit B|Thermoplasma volcanium

Query: 2 GIPADIKL 9
G+P D+KL
Sbjct: 150 GLPKDMKL 157


>sp|PURP_SULTO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfurisphaera tokodaii (strain DSM

Query: 3 IPADIKL 9
+PADIK+
Sbjct: 215 LPADIKI 221




65|Sequence|321|330|DIKLFDIFSQ

>sp|GGPS_SULAC|GERANYLGERANYL diphosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IKLFDIFSQ 10
IK FDIF++
Sbjct: 134 IKAFDIFTR 142


>sp|APGM_THEVO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DIKLFD 6
D+KLFD
Sbjct: 369 DVKLFD 374


>sp|Y1615_METJA|CHEF taxis protein family member|Methanocaldococcus jannaschii (strain

Query: 1 DIKLFDIFSQ 10
D K++DIFS
Sbjct: 177 DSKIYDIFSN 186


>sp|Y785_METJA|UNCHARACTERIZED protein MJ0785|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IKLFDIFSQ 10
+KLFDI S+
Sbjct: 63 LKLFDIASR 71


>sp|MRE11_SACS2|DNA double-strand break repair protein|Saccharolobus solfataricus

Query: 4 LFDIFSQ 10
++DIFSQ
Sbjct: 26 IYDIFSQ 32


>sp|Y1006_METJA|UNCHARACTERIZED ATP-binding protein MJ1006|Methanocaldococcus jannaschii (strain

Query: 1 DIKLFDIFSQ 10
+IKL D+FS+
Sbjct: 123 NIKLNDVFSK 132


>sp|Y1038_PYRHO|PROBABLE ABC transporter permease protein|Pyrococcus horikoshii (strain ATCC

Query: 1 DIKLFDI 7
D+K+FDI
Sbjct: 229 DLKIFDI 235




66|Sequence|326|335|DIFSQQVATV

***** No hits found ******


67|Sequence|331|340|QVATVIQSRQ

***** No hits found ******


68|Sequence|336|345|IQSRQDMPSE

>sp|SYG_METKA|GLYCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 IQSRQDMPSE 10
I+SRQ +P E
Sbjct: 292 IRSRQHLPEE 301




69|Sequence|341|350|DMPSEDVVSL

>sp|COBQ_METPE|PROBABLE cobyric acid synthase|Methanosphaerula palustris (strain ATCC

Query: 1 DMPSEDVVSL 10
D+PSED +SL
Sbjct: 228 DLPSEDSLSL 237


>sp|COBQ_METHJ|PROBABLE cobyric acid synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DMPSEDVVSL 10
D+PSED +SL
Sbjct: 228 DIPSEDSLSL 237


>sp|COBQ_METBF|PROBABLE cobyric acid synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DMPSEDVVSL 10
++PSED VSL
Sbjct: 230 NIPSEDSVSL 239


>sp|COBQ_METAC|PROBABLE cobyric acid synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 MPSEDVVSL 10
+PSED VSL
Sbjct: 231 IPSEDSVSL 239


>sp|COBQ_METMA|PROBABLE cobyric acid synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 MPSEDVVSL 10
+PSED VSL
Sbjct: 231 IPSEDSVSL 239


>sp|AROK_ARCFU|SHIKIMATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DMPSEDVV 8
D P+EDVV
Sbjct: 262 DEPAEDVV 269


>sp|COBQ_METAR|PROBABLE cobyric acid synthase|Methanocella arvoryzae (strain DSM 22066

Query: 2 MPSEDVVSL 10
+PSED VSL
Sbjct: 231 IPSEDSVSL 239


>sp|Y382_METBU|UPF0758 protein Mbur_0382|Methanococcoides burtonii (strain DSM 6242

Query: 1 DMPSED 6
DMPSED
Sbjct: 10 DMPSED 15


>sp|AATC_PYRHO|A-TYPE ATP synthase subunit C|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 MPSEDVVSL 10
MPSE++ SL
Sbjct: 246 MPSEEIKSL 254


>sp|RS19_METTH|SMALL ribosomal subunit protein uS19|Methanothermobacter

Query: 1 DMPSEDVVSL 10
+MP +DV+ L
Sbjct: 18 EMPLDDVIKL 27


>sp|PMDHS_METTH|PHOSPHOMEVALONATE dehydratase small subunit|Methanothermobacter thermautotrophicus

Query: 1 DMPSEDVVSL 10
D PSED++ L
Sbjct: 104 DRPSEDLLGL 113


>sp|Y888_METJA|PROBABLE metallo-hydrolase MJ0888|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DMPSEDVVSL 10
D+P+ DV+ L
Sbjct: 158 DLPTGDVIQL 167


>sp|SYFA_METTH|PHENYLALANINE--TRNA ligase alpha subunit|Methanothermobacter thermautotrophicus (strain

Query: 1 DMPSEDVV 8
D+P ED+V
Sbjct: 308 DLPCEDLV 315


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DMPSEDVVSL 10
+ P EDV+SL
Sbjct: 8 NTPDEDVLSL 17




70|Sequence|346|355|DVVSLQVSLI

***** No hits found ******


71|Sequence|351|360|QVSLINLAMK

***** No hits found ******


72|Sequence|356|365|NLAMKCYPDR

>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LAMKCYPDR 10
+A++C PDR
Sbjct: 727 MAVRCDPDR 735


>sp|ACD2_ARCFU|ACETATE--COA ligase [ADP-forming] II|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LAMKCYP 8
L +KCYP
Sbjct: 267 LELKCYP 273


>sp|DNAJ_METTE|CHAPERONE protein DnaJ|Methanosarcina thermophila

Query: 2 LAMKCYPDR 10
LA+K +PDR
Sbjct: 29 LALKYHPDR 37


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LAMKCYPD 9
+ M+CYP+
Sbjct: 337 MLMECYPE 344


>sp|Y38K_THETE|UNCHARACTERIZED 38 kDa protein in|Thermoproteus tenax

Query: 1 NLAMKCYPDR 10
NLA+K Y D+
Sbjct: 117 NLAVKWYQDK 126


>sp|Y409_METJA|UNCHARACTERIZED protein MJ0409|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NLAMKCYPD 9
NL KC PD
Sbjct: 191 NLPEKCIPD 199


>sp|RIFK_METAR|RIBOFLAVIN kinase|Methanocella arvoryzae (strain DSM 22066

Query: 5 KCYPDR 10
KCYP R
Sbjct: 163 KCYPVR 168


>sp|Y699_METJA|UNCHARACTERIZED protein MJ0699|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NLAMKCY 7
N A+KCY
Sbjct: 132 NKALKCY 138


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NLAMKCYPD 9
NLA+ +PD
Sbjct: 235 NLAVSAHPD 243


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 NLAMKCYPD 9
NLA+ +PD
Sbjct: 235 NLAVSAHPD 243


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 NLAMKCYPD 9
++A++C PD
Sbjct: 290 DIALQCSPD 298




73|Sequence|361|370|CYPDRVDYVD

>sp|DNLI_SACS2|DNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YPDRVDYV 9
YPD VDYV
Sbjct: 289 YPDVVDYV 296


>sp|FAU1_THEGJ|PROBABLE ribonuclease FAU-1|Thermococcus gammatolerans (strain DSM 15229

Query: 2 YPDRVDYVD 10
YPDR Y+D
Sbjct: 414 YPDRARYID 422


>sp|RIFK_METMA|RIBOFLAVIN kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CYPDRVDYVD 10
CYP RV+ +D
Sbjct: 167 CYPVRVEGID 176


>sp|FAU1_PYRFU|PROBABLE ribonuclease FAU-1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YPDRVDYVD 10
YPD+ YVD
Sbjct: 412 YPDKARYVD 420


>sp|FAU1_PYRAB|PROBABLE ribonuclease FAU-1|Pyrococcus abyssi (strain GE5 /

Query: 2 YPDRVDYVD 10
YPD+ YVD
Sbjct: 412 YPDKARYVD 420


>sp|FPRA_METTH|COENZYME F420H(2) oxidase|Methanothermobacter thermautotrophicus (strain

Query: 1 CYPDRVD 7
CYP R+D
Sbjct: 177 CYPQRLD 183


>sp|FAU1_PYRHO|PROBABLE ribonuclease FAU-1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YPDRVDYVD 10
YPD+ Y+D
Sbjct: 412 YPDKARYID 420


>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 YPDRVDY 8
YPD VDY
Sbjct: 293 YPDVVDY 299


>sp|FAU1_HALWD|PROBABLE ribonuclease FAU-1|Haloquadratum walsbyi (strain DSM 16790

Query: 1 CYPDRVDYVD 10
C+P + YVD
Sbjct: 445 CFPKSIRYVD 454


>sp|IDH_CALNO|ISOCITRATE dehydrogenase [NADP]|Caldococcus noboribetus

Query: 1 CYPDRVDYV 9
C+P+ +D+V
Sbjct: 145 CHPENIDWV 153


>sp|DNLI2_THEPD|DNA ligase 2|Thermofilum pendens (strain DSM 2475

Query: 2 YPDRVDYV 9
YPD V+YV
Sbjct: 294 YPDVVEYV 301


>sp|DNLI_SULTO|DNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YPDRVDYV 9
YPD V+YV
Sbjct: 289 YPDVVEYV 296


>sp|PTH_METBU|PEPTIDYL-TRNA hydrolase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PDRVDYVD 10
P R DY+D
Sbjct: 99 PARADYID 106


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 2 YPDRVDYV 9
YPDR DY+
Sbjct: 242 YPDRWDYI 249


>sp|DNLI_SACSH|DNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 2 YPDRVDYV 9
YPD V+Y+
Sbjct: 289 YPDVVEYI 296


>sp|DNLI_SACI7|DNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 YPDRVDYV 9
YPD V+Y+
Sbjct: 289 YPDVVEYI 296


>sp|DNLI_SACI6|DNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 YPDRVDYV 9
YPD V+Y+
Sbjct: 289 YPDVVEYI 296


>sp|DNLI_SACI4|DNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 YPDRVDYV 9
YPD V+Y+
Sbjct: 289 YPDVVEYI 296


>sp|DNLI_SACI3|DNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 YPDRVDYV 9
YPD V+Y+
Sbjct: 289 YPDVVEYI 296


>sp|DNLI_SACI2|DNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 YPDRVDYV 9
YPD V+Y+
Sbjct: 289 YPDVVEYI 296


>sp|DNLI_SACI1|DNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 YPDRVDYV 9
YPD V+Y+
Sbjct: 289 YPDVVEYI 296


>sp|Y865_METJA|PUTATIVE methylthiotransferase MJ0865|Methanocaldococcus jannaschii (strain

Query: 3 PD-RVDYVD 10
PD RVDYVD
Sbjct: 257 PDMRVDYVD 265


>sp|DNLI_SULAC|DNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YPDRVDYV 9
YPD V+Y+
Sbjct: 289 YPDVVEYI 296


>sp|IF2P_THEVO|PROBABLE translation initiation factor IF-2|Thermoplasma volcanium (strain

Query: 2 YPDRVDYVD 10
+PD V YVD
Sbjct: 541 FPDDVLYVD 549


>sp|IF2P_THEAC|PROBABLE translation initiation factor IF-2|Thermoplasma acidophilum (strain

Query: 2 YPDRVDYVD 10
+PD V YVD
Sbjct: 541 FPDDVLYVD 549


>sp|TOP6A_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PDRVDYVD 10
PD +D+VD
Sbjct: 190 PDLIDFVD 197


>sp|TOP6A_SACSH|TYPE 2 DNA topoisomerase 6|Saccharolobus shibatae (strain ATCC 51178

Query: 3 PDRVDYVD 10
PD +D++D
Sbjct: 192 PDLIDFID 199


>sp|FAU1_THEKO|PROBABLE ribonuclease FAU-1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 YPDRVDYVD 10
YPD YVD
Sbjct: 414 YPDGARYVD 422


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 YPDRVDYV 9
YP+ +DYV
Sbjct: 266 YPEIIDYV 273


>sp|AMPD_AERPE|ANHYDROMEVALONATE phosphate decarboxylase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PDRVDYVD 10
P R++YVD
Sbjct: 87 PGRLEYVD 94


>sp|SYFB_METVS|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus vannielii (strain ATCC 35089

Query: 3 PDRVDYV 9
PDR DY+
Sbjct: 58 PDRPDYL 64


>sp|SYFB_METMP|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain DSM 14266

Query: 3 PDRVDYV 9
PDR DY+
Sbjct: 58 PDRPDYL 64


>sp|SYFB_METM7|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C7 /

Query: 3 PDRVDYV 9
PDR DY+
Sbjct: 58 PDRPDYL 64


>sp|SYFB_METM6|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C6 /

Query: 3 PDRVDYV 9
PDR DY+
Sbjct: 58 PDRPDYL 64


>sp|SYFB_METM5|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C5 /

Query: 3 PDRVDYV 9
PDR DY+
Sbjct: 58 PDRPDYL 64


>sp|GUAAB_METPE|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosphaerula

Query: 2 YPDRVD 7
YPDR++
Sbjct: 128 YPDRIE 133


>sp|GUAAB_METMA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina mazei

Query: 2 YPDRVD 7
YPDR++
Sbjct: 128 YPDRIE 133


>sp|GUAAB_METBF|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina barkeri

Query: 2 YPDRVD 7
YPDR++
Sbjct: 128 YPDRIE 133


>sp|GUAAB_METB6|GMP synthase [glutamine-hydrolyzing] subunit B|Methanoregula boonei

Query: 2 YPDRVD 7
YPDR++
Sbjct: 128 YPDRIE 133


>sp|GUAAB_METAR|GMP synthase [glutamine-hydrolyzing] subunit B|Methanocella arvoryzae

Query: 2 YPDRVD 7
YPDR++
Sbjct: 128 YPDRIE 133


>sp|GUAAB_METAC|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina

Query: 2 YPDRVD 7
YPDR++
Sbjct: 128 YPDRIE 133


>sp|GUAAB_METMJ|GMP synthase [glutamine-hydrolyzing] subunit B|Methanoculleus

Query: 2 YPDRVD 7
YPDR++
Sbjct: 128 YPDRIE 133


>sp|PROB_METBF|GLUTAMATE 5-kinase|Methanosarcina barkeri (strain Fusaro /

Query: 2 YPDRVDYVD 10
Y DRV Y++
Sbjct: 122 YSDRVSYLN 130


>sp|MCRA_METBF|METHYL-COENZYME M reductase subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 1 CYPDRVDYVD 10
C PD + YV+
Sbjct: 95 CEPDDLHYVN 104


>sp|GUAAB_HALLT|GMP synthase [glutamine-hydrolyzing] subunit B|Halorubrum lacusprofundi

Query: 2 YPDRVD 7
YPDR++
Sbjct: 129 YPDRIE 134


>sp|GUAAB_METBU|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcoides

Query: 2 YPDRVD 7
YPDR++
Sbjct: 127 YPDRIE 132


>sp|GSA_META3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 CYPDRVDYV 9
C P R DY+
Sbjct: 218 CIPPREDYL 226


>sp|Y856_METTH|METALLOPROTEASE MTH_856|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 DRVDYVD 10
DRV+Y D
Sbjct: 17 DRVEYAD 23


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 CYPDRVDYVD 10
C P RV+ +D
Sbjct: 31 CLPGRVENLD 40


>sp|MCRY_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 YPDRVDYVD 10
Y DR+D D
Sbjct: 4 YEDRIDLYD 12


>sp|MCRB_METFE|METHYL-COENZYME M reductase subunit beta|Methanothermus fervidus

Query: 2 YPDRVDYV 9
YP V+YV
Sbjct: 164 YPQSVEYV 171


>sp|THIC_IGNH4|PHOSPHOMETHYLPYRIMIDINE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 YPDRVDYVD 10
YPDR VD
Sbjct: 363 YPDRAMKVD 371


>sp|Y1804_AERPE|UNCHARACTERIZED protein APE_1804|Aeropyrum pernix (strain ATCC 700893

Query: 2 YPDRVDYVD 10
Y RV+YVD
Sbjct: 365 YAIRVEYVD 373


>sp|FAU1_NATPD|PROBABLE ribonuclease FAU-1|Natronomonas pharaonis (strain ATCC 35678

Query: 1 CYPDRVDYVD 10
+PD V YVD
Sbjct: 403 VFPDTVRYVD 412


>sp|Y1276_AERPE|UNCHARACTERIZED protein APE_1276|Aeropyrum pernix (strain ATCC 700893

Query: 2 YPDRVDYVD 10
Y RV+YVD
Sbjct: 318 YAIRVEYVD 326


>sp|SYFB_META3|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 PDRVDYV 9
PDR DY+
Sbjct: 53 PDRPDYL 59


>sp|Y1301_METJA|UNCHARACTERIZED ATP-binding protein MJ1301|Methanocaldococcus jannaschii (strain

Query: 4 DRVDYV 9
DRVDY+
Sbjct: 205 DRVDYI 210


>sp|FAU1_HALSA|PROBABLE ribonuclease FAU-1|Halobacterium salinarum (strain ATCC 700922

Query: 1 CYPDRVDYVD 10
+PD V YVD
Sbjct: 411 VFPDAVRYVD 420


>sp|FAU1_HALS3|PROBABLE ribonuclease FAU-1|Halobacterium salinarum (strain ATCC 29341

Query: 1 CYPDRVDYVD 10
+PD V YVD
Sbjct: 411 VFPDAVRYVD 420


>sp|GUAAB_HALSA|GMP synthase [glutamine-hydrolyzing] subunit B|Halobacterium salinarum

Query: 2 YPDRVD 7
YPDR++
Sbjct: 129 YPDRIE 134


>sp|GUAAB_HALS3|GMP synthase [glutamine-hydrolyzing] subunit B|Halobacterium salinarum

Query: 2 YPDRVD 7
YPDR++
Sbjct: 129 YPDRIE 134


>sp|GUAAB_HALMA|GMP synthase [glutamine-hydrolyzing] subunit B|Haloarcula marismortui

Query: 2 YPDRVD 7
YPDR++
Sbjct: 129 YPDRIE 134


>sp|Y409_METJA|UNCHARACTERIZED protein MJ0409|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CYPDRVDYV 9
C PD DYV
Sbjct: 196 CIPDYYDYV 204


>sp|Y505_METJA|UNCHARACTERIZED protein MJ0505|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YPDRVDYV 9
YP+ VDY+
Sbjct: 86 YPEFVDYL 93


>sp|Y439_METJA|UNCHARACTERIZED ATP-binding protein MJ0439|Methanocaldococcus jannaschii (strain

Query: 4 DRVDYV 9
DRVDY+
Sbjct: 210 DRVDYI 215


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 1 CYPDRVDYV 9
C+ VDYV
Sbjct: 341 CFEPAVDYV 349


>sp|SYR_METKA|ARGININE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 PDRVDYV 9
PDR+D V
Sbjct: 378 PDRIDVV 384


>sp|GUAAB_NATPD|GMP synthase [glutamine-hydrolyzing] subunit B|Natronomonas pharaonis

Query: 2 YPDRVD 7
YPDR++
Sbjct: 129 YPDRIE 134


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 CYPDRVDYV 9
YPD +D++
Sbjct: 273 VYPDTIDFL 281


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 CYPDRVDYV 9
YPD +D++
Sbjct: 273 VYPDTIDFL 281


>sp|MFNF_METJA|(4- jannaschii (strain ATCC 43067

Query: 2 YPDRVDYV 9
Y D VDYV
Sbjct: 48 YNDNVDYV 55


>sp|PYRB_STAMF|ASPARTATE carbamoyltransferase catalytic subunit|Staphylothermus marinus

Query: 2 YPDRVDY 8
YPD ++Y
Sbjct: 236 YPDPIEY 242




74|Sequence|366|375|VDYVDKVLET

>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 1 VDYVDKVLET 10
VDYV+K +ET
Sbjct: 969 VDYVEKRVET 978


>sp|FEN_METAR|FLAP endonuclease 1|Methanocella arvoryzae (strain DSM 22066

Query: 1 VDYVDKVLE 9
VD VDKVLE
Sbjct: 313 VDRVDKVLE 321


>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 2 DYVDKVLET 10
DYV VLET
Sbjct: 156 DYVRAVLET 164


>sp|RTCB_ARCFU|TRNA-SPLICING ligase RtcB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VDYVDKVLE 9
V YVDKV +
Sbjct: 209 VQYVDKVFD 217


>sp|HDRB_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit B|Methanosarcina mazei (strain

Query: 1 VDYVDKVL 8
VDY DK++
Sbjct: 186 VDYTDKMM 193


>sp|HDRB2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 1 VDYVDKVL 8
VDY DK++
Sbjct: 186 VDYTDKMM 193


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 2 DYVDKVLET 10
++VDK++ET
Sbjct: 481 EFVDKLMET 489


>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VDYVDKVLE 9
+DYV+KVL+
Sbjct: 798 MDYVEKVLQ 806


>sp|HDRB_METKA|COB--COM heterodisulfide reductase subunit B|Methanopyrus kandleri (strain

Query: 1 VDYVDKVL 8
VDY DK++
Sbjct: 194 VDYKDKIM 201


>sp|DPCKG_SACI7|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 DYVDKVLE 9
DYV +VLE
Sbjct: 55 DYVSRVLE 62


>sp|RTCB_THEKO|TRNA-SPLICING ligase RtcB|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VDYVDKV 7
V YVDKV
Sbjct: 209 VQYVDKV 215


>sp|CYNS_SULTO|CYANATE hydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 YVDKVLET 10
YVDKV+E
Sbjct: 122 YVDKVIEN 129


>sp|RL22_HALMA|LARGE ribosomal subunit protein uL22|Haloarcula marismortui (strain

Query: 1 VDYVDKVLE 9
VDY++ V+E
Sbjct: 45 VDYLEAVIE 53


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 1 VDYVDKVLE 9
VDYV VLE
Sbjct: 704 VDYVKTVLE 712


>sp|Y066_METJA|UNCHARACTERIZED protein MJ0066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VDYVDKVLE 9
+D+++K+LE
Sbjct: 57 MDFINKILE 65


>sp|LYSY_SULTO|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VDYVDKVLE 9
++YV K+LE
Sbjct: 82 LEYVPKILE 90


>sp|Y896_ARCFU|UNCHARACTERIZED protein AF_0896|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VDYVDKVLET 10
+DY+D+V+++
Sbjct: 22 IDYLDRVIKS 31


>sp|PTH_METBU|PEPTIDYL-TRNA hydrolase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VDYVDKV 7
DY+DKV
Sbjct: 102 ADYIDKV 108


>sp|DPCKG_SACS2|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus solfataricus (strain ATCC

Query: 2 DYVDKVLE 9
DYV +VLE
Sbjct: 55 DYVSRVLE 62


>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 VDYVDKVLET 10
V+Y DK+ E+
Sbjct: 178 VEYCDKLFES 187




75|Sequence|371|380|KVLETTVEIF

>sp|PURP_METTP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothrix thermoacetophila (strain

Query: 1 KVLETTVEIF 10
+V+ET++E+F
Sbjct: 274 RVVETSIELF 283


>sp|PDXT_METVS|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus vannielii (strain

Query: 1 KVLETTVEIF 10
K+LE TVEI
Sbjct: 135 KILEKTVEII 144


>sp|AATI_SACS2|A-TYPE ATP synthase subunit I|Saccharolobus solfataricus (strain ATCC

Query: 1 KVLETTVEIF 10
KVLE+ VEI+
Sbjct: 325 KVLESLVEIY 334


>sp|KHSE_HALLT|HOMOSERINE kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 KVLETTVEI 9
K ETT+E+
Sbjct: 35 KAAETTIEV 43




76|Sequence|376|385|TVEIFNKLNL

>sp|Y1067_METMP|UNCHARACTERIZED iron-sulfur protein MMP1067|Methanococcus maripaludis (strain DSM

Query: 2 VEIFNKLNL 10
+EIFNKLN+
Sbjct: 325 LEIFNKLNV 333


>sp|Y092_METJA|UNCHARACTERIZED iron-sulfur protein MJ0092|Methanocaldococcus jannaschii (strain

Query: 2 VEIFNKLNL 10
+EIFNKL++
Sbjct: 322 LEIFNKLDV 330


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 3 EIFNKLNL 10
+IFNKLN+
Sbjct: 515 KIFNKLNM 522


>sp|AROC_METJA|CHORISMATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 IFNKLN 9
IFNKLN
Sbjct: 239 IFNKLN 244


>sp|SYP_METVS|PROLINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 TVEIFNKLN 9
TVE FN LN
Sbjct: 361 TVEAFNILN 369


>sp|PYRG_SULAC|CTP synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TVEIFNKLNL 10
T +IFNKL L
Sbjct: 257 TKKIFNKLGL 266


>sp|GCST_PYRHO|PROBABLE aminomethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TVEIFNKLNL 10
T+E F KL+L
Sbjct: 130 TIEQFTKLDL 139


>sp|GCST_PYRAB|PROBABLE aminomethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 TVEIFNKLNL 10
T+E F KL+L
Sbjct: 130 TIEQFTKLDL 139


>sp|K6PF_METAC|ADP-SPECIFIC phosphofructokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TVEIFNKLNL 10
TVE+ N LN+
Sbjct: 310 TVEVANALNV 319


>sp|CDC62_SULTO|ORC1-TYPE DNA replication protein 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VEIFNKLNL 10
VEI N+LNL
Sbjct: 114 VEIANQLNL 122


>sp|GCST_PYRFU|PROBABLE aminomethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TVEIFNKLNL 10
T+E F KL+L
Sbjct: 130 TIEQFTKLDL 139


>sp|GLYA_PYRNV|SERINE hydroxymethyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 EIFNKLNL 10
++FN LNL
Sbjct: 421 KVFNSLNL 428


>sp|SYFB_METAR|PHENYLALANINE--TRNA ligase beta subunit|Methanocella arvoryzae (strain DSM 22066

Query: 3 EIFNKLNL 10
E+F K+NL
Sbjct: 392 EVFGKMNL 399


>sp|BIOA_METJA|ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TVEIFNKLNL 10
T+EIF K N+
Sbjct: 347 TLEIFEKENV 356


>sp|UVRC_METST|UVRABC system protein C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 TVEIFNKLNL 10
V++F KLN+
Sbjct: 469 AVDVFKKLNI 478


>sp|MTMC2_METMA|MONOMETHYLAMINE corrinoid protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 EIFNKL 8
EIFNKL
Sbjct: 5 EIFNKL 10




77|Sequence|381|390|NKLNLEHIAT

>sp|RL4_METB6|LARGE ribosomal subunit protein uL4|Methanoregula boonei (strain DSM

Query: 1 NKLNLEHIA 9
++LN+EH+A
Sbjct: 218 DQLNVEHLA 226


>sp|TSR3_METMA|16S rRNA aminocarboxypropyltransferase|Methanosarcina mazei (strain

Query: 2 KLNLEHIA 9
KLNLEH A
Sbjct: 88 KLNLEHRA 95


>sp|TSR3_METAC|16S rRNA aminocarboxypropyltransferase|Methanosarcina acetivorans

Query: 2 KLNLEHIA 9
KLNLEH A
Sbjct: 89 KLNLEHRA 96


>sp|RL18_CALMQ|LARGE ribosomal subunit protein uL18|Caldivirga maquilingensis (strain

Query: 1 NKLNLEHIA 9
++LN EHIA
Sbjct: 142 DRLNGEHIA 150


>sp|KAD_METTP|ADENYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 KLNLEHIAT 10
K N++HI+T
Sbjct: 23 KFNVKHIST 31


>sp|Y939_METJA|UNCHARACTERIZED protein MJ0939|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NKLNLEHI 8
NKLNLE I
Sbjct: 196 NKLNLEEI 203




78|Sequence|386|395|EHIATSSAVS

>sp|HIS5_METBF|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina barkeri

Query: 1 EHIATSSAVS 10
EH+ +S A+S
Sbjct: 22 EHVGSSPAIS 31


>sp|MPGS_AERPE|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EHIATSSAVS 10
EHIA +AVS
Sbjct: 316 EHIAEMTAVS 325




79|Sequence|391|400|SSAVSKELTR

>sp|RL18_METBU|LARGE ribosomal subunit protein uL18|Methanococcoides burtonii (strain

Query: 1 SSAVSKELTR 10
SSA+SKEL +
Sbjct: 60 SSAISKELAK 69


>sp|SURE_METS3|5'-NUCLEOTIDASE SurE|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 SSAVSKELTR 10
S A+S+E+TR
Sbjct: 124 SIAISQEVTR 133




80|Sequence|396|405|KELTRLLKIP

>sp|HIS4_METPE|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanosphaerula palustris

Query: 1 KELTRLLKIP 10
KEL R++ IP
Sbjct: 182 KELIRMVSIP 191


>sp|PANB_HYPBU|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 KELTRLLKIP 10
+E+TR L IP
Sbjct: 193 REITRKLSIP 202


>sp|Y178_METBF|UPF0284 protein Mbar_A0178|Methanosarcina barkeri (strain Fusaro /

Query: 2 ELTRLLKIP 10
ELTR+L +P
Sbjct: 278 ELTRILGVP 286


>sp|Y605_METB6|UPF0316 protein Mboo_0605|Methanoregula boonei (strain DSM 21154

Query: 1 KELTRLLKI 9
KEL+RLL I
Sbjct: 143 KELSRLLSI 151


>sp|GUAAB_SACI7|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 KELTRLLKIP 10
+EL R LK+P
Sbjct: 175 RELARYLKLP 184


>sp|GUAAB_SACI6|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 KELTRLLKIP 10
+EL R LK+P
Sbjct: 175 RELARYLKLP 184


>sp|GUAAB_SACI4|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 KELTRLLKIP 10
+EL R LK+P
Sbjct: 175 RELARYLKLP 184


>sp|GUAAB_SACI3|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 KELTRLLKIP 10
+EL R LK+P
Sbjct: 175 RELARYLKLP 184


>sp|GUAAB_SACI1|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 KELTRLLKIP 10
+EL R LK+P
Sbjct: 175 RELARYLKLP 184


>sp|GUAAB_SACI2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 KELTRLLKIP 10
+EL R LK+P
Sbjct: 175 RELARYLKLP 184


>sp|GUAAB_SACS2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 KELTRLLKIP 10
+EL R LK+P
Sbjct: 175 RELARYLKLP 184


>sp|Y626_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB06260|Pyrococcus abyssi (strain GE5 /

Query: 1 KELTRLLKI 9
KEL++LLKI
Sbjct: 7 KELSKLLKI 15


>sp|DGGGP_THEPD|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermofilum pendens (strain DSM 2475

Query: 4 TRLLKIP 10
TR+LK+P
Sbjct: 264 TRILKVP 270


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 KELTRLLKIP 10
+ELTRLL P
Sbjct: 630 RELTRLLGDP 639


>sp|RL6_METAC|LARGE ribosomal subunit protein uL6|Methanosarcina acetivorans (strain

Query: 1 KELTRLLKIP 10
KE+ R ++IP
Sbjct: 3 KEIARTIEIP 12


>sp|PANB_PYRCJ|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 KELTRLLKIP 10
KE+T +KIP
Sbjct: 191 KEVTEAVKIP 200


>sp|SUI1_METTH|PROTEIN translation factor SUI1 homolog|Methanothermobacter

Query: 1 KELTRLLK 8
KELT++LK
Sbjct: 53 KELTKILK 60




81|Sequence|401|410|LLKIPVDTYN

>sp|RS2_SACS2|SMALL ribosomal subunit protein uS2|Saccharolobus solfataricus (strain

Query: 2 LKIPVDTY 9
L +PVDTY
Sbjct: 35 LLVPVDTY 42


>sp|MPTA_METTP|GTP cyclohydrolase MptA|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LLKIPVDTYN 10
L K+PV T+N
Sbjct: 188 LKKVPVATHN 197


>sp|KADA_PYRAE|ADENYLATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 KIPVDTY 9
KIPVD Y
Sbjct: 55 KIPVDEY 61


>sp|CBID_SULTO|COBALT-PRECORRIN-5B C(1)-methyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LKIPVDTYN 10
L+IPVD Y
Sbjct: 46 LEIPVDDYE 54


>sp|Y1542_METJA|UNCHARACTERIZED protein MJ1542|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 IPVDTYN 10
IP+D YN
Sbjct: 611 IPIDEYN 617


>sp|FBPAP_PYRNV|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LLKIPVDTYN 10
LLK P D Y+
Sbjct: 180 LLKTPEDAYS 189


>sp|DPCKG_PYRCJ|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LLKIPVDTY 9
L+ IPVD Y
Sbjct: 146 LIAIPVDWY 154


>sp|Y325_METJA|UNCHARACTERIZED protein MJ0325|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLKIPVDTY 9
+KIP+D Y
Sbjct: 142 FVKIPIDHY 150


>sp|LEU1_ARCFU|PROBABLE 2-isopropylmalate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 2 LKIPVDTY 9
LK+P+D +
Sbjct: 190 LKVPIDVH 197


>sp|DNLI2_HALWD|DNA ligase 2|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LLKIPVDTYN 10
+LK P TYN
Sbjct: 463 MLKDPDSTYN 472


>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LKIPVDTYN 10
+KIP+D Y+
Sbjct: 240 VKIPLDGYD 248


>sp|RS2_SULTO|SMALL ribosomal subunit protein uS2|Sulfurisphaera tokodaii (strain DSM

Query: 2 LKIPVDTY 9
L +P+DTY
Sbjct: 29 LLVPLDTY 36


>sp|TRM56_PICTO|TRNA (cytidine(56)-2'-O)-methyltransferase|Picrophilus torridus (strain

Query: 3 KIPVDTY 9
K+P+D Y
Sbjct: 107 KVPIDAY 113


>sp|TBP2_HALVD|TATA-BOX-BINDING protein 2|Haloferax volcanii (strain ATCC 29605

Query: 2 LKIPVD 7
LKIPVD
Sbjct: 89 LKIPVD 94


>sp|DPCKG_PYRIL|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LLKIPVDTY 9
L+ IPVD Y
Sbjct: 146 LIAIPVDWY 154


>sp|Y663_METJA|UNCHARACTERIZED protein MJ0663|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LKIPVDTY 9
L IPVD Y
Sbjct: 152 LNIPVDLY 159


>sp|Y609_METJA|UNCHARACTERIZED protein MJ0609|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLKIPVDTYN 10
L+ P++T+N
Sbjct: 115 LINAPINTFN 124


>sp|RS2_SULAC|SMALL ribosomal subunit protein uS2|Sulfolobus acidocaldarius (strain

Query: 2 LKIPVDTY 9
L +P+DTY
Sbjct: 29 LLVPLDTY 36




82|Sequence|406|415|VDTYNNILTV

>sp|OFOB2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 3 TYNNILT 9
TYNNI+T
Sbjct: 202 TYNNIMT 208


>sp|Y1653_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 1 VDTYNNILTV 10
+D YN+I TV
Sbjct: 112 IDKYNDIATV 121


>sp|RL1_PICTO|LARGE ribosomal subunit protein uL1|Picrophilus torridus (strain ATCC

Query: 2 DTYNNILTV 10
D YNN +TV
Sbjct: 168 DLYNNFVTV 176


>sp|GSA_METTH|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 VDTYNNILTV 10
VDT N LTV
Sbjct: 164 VDTVRNTLTV 173


>sp|Y636_METJA|UNCHARACTERIZED protein MJ0636|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VDTYNNILTV 10
+D YNN + V
Sbjct: 375 IDVYNNFMEV 384


>sp|DPHB_STAMF|DIPHTHINE synthase|Staphylothermus marinus (strain ATCC 43588

Query: 1 VDTYNNIL 8
VDTY NI+
Sbjct: 30 VDTYTNIV 37


>sp|PYRB_PYRAR|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum arsenaticum

Query: 1 VDTYNNILTV 10
+D Y+NI+ +
Sbjct: 94 LDAYSNIIVI 103


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 VDTYNNILTV 10
++TY NIL +
Sbjct: 261 LETYKNILGI 270


>sp|T2MW_METWO|TYPE II restriction enzyme MwoI|Methanothermobacter wolfeii

Query: 3 TYNNILTV 10
TYNN LT+
Sbjct: 164 TYNNKLTI 171




83|Sequence|411|420|NILTVLKLKH

>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 3 LTVLKLKH 10
L V+KLKH
Sbjct: 345 LAVMKLKH 352




84|Sequence|416|425|LKLKHFHPLF

>sp|HIS5_METBF|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina barkeri (strain

Query: 1 LKLKHFHPLF 10
+K+K HPLF
Sbjct: 123 IKIKQDHPLF 132


>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 3 LKHFHP 8
+KHFHP
Sbjct: 294 VKHFHP 299


>sp|DP2S_PYRFU|DNA polymerase II small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LKLKHFHPLF 10
LK++H P+F
Sbjct: 518 LKMRHVAPMF 527


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 LKLKHFHPL 9
+KL+H HPL
Sbjct: 275 VKLQHQHPL 283


>sp|DP2S_PYRAB|DNA polymerase II small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 LKLKHFHPLF 10
LK++H P F
Sbjct: 524 LKMRHLAPTF 533


>sp|DP2S_PYRHO|DNA polymerase II small subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 LKLKHFHPLF 10
LK++H P F
Sbjct: 527 LKMRHLAPTF 536


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 1 LKLKHFHPL 9
LKL HPL
Sbjct: 275 LKLSSMHPL 283


>sp|NADA1_METAC|QUINOLINATE synthase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LKLKHFHPL 9
LK+K HPL
Sbjct: 183 LKMKEKHPL 191


>sp|RL14E_METM5|LARGE ribosomal subunit protein eL14|Methanococcus maripaludis (strain

Query: 3 LKHFHP 8
LKHF P
Sbjct: 46 LKHFEP 51


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 LKHFHPLF 10
LK+ HPL
Sbjct: 294 LKYIHPLL 301


>sp|DNLI_METJA|DNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LKLKHFHPL 9
LKLK F P+
Sbjct: 216 LKLKLFRPI 224


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LKLKHFHP 8
LK+ H HP
Sbjct: 493 LKIPHRHP 500


>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LKLKHFHP 8
LK+ H HP
Sbjct: 493 LKIPHRHP 500


>sp|DNLI_METMP|DNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LKLKHFHPL 9
LKLK F P+
Sbjct: 218 LKLKVFRPI 226


>sp|DNLI_METM6|DNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 LKLKHFHPL 9
LKLK F P+
Sbjct: 218 LKLKVFRPI 226


>sp|APGM_METMP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KLKHFHPL 9
K+K HPL
Sbjct: 167 KVKEIHPL 174


>sp|Y365_METJA|UNCHARACTERIZED protein MJ0365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LKLKHF 6
LK+KHF
Sbjct: 79 LKIKHF 84


>sp|Y819_PYRHO|UNCHARACTERIZED methyltransferase PH0819|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LKLKHF 6
+KLKHF
Sbjct: 405 MKLKHF 410




85|Sequence|421|430|FHPLFEYFDY

>sp|THIC_METKA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 HPLFEYFDY 10
+PL+E FDY
Sbjct: 202 NPLYENFDY 210


>sp|THIC1_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 HPLFEYFDY 10
+PL+E FDY
Sbjct: 202 NPLYENFDY 210


>sp|PGK_METMP|PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FHPLFEYF 8
HP F+YF
Sbjct: 147 LHPFFDYF 154


>sp|CFBD_METJA|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanocaldococcus

Query: 1 FHPLFEYFDY 10
+HP+ E +DY
Sbjct: 312 YHPIKEIYDY 321


>sp|AATC_METST|A-TYPE ATP synthase subunit C|Methanosphaera stadtmanae (strain ATCC

Query: 1 FHPLFEYFDY 10
F PL EY+ Y
Sbjct: 40 FRPLMEYYPY 49


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 FEYFDY 10
FEY+DY
Sbjct: 315 FEYYDY 320


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 HPLFEYFD 9
+PLF+Y D
Sbjct: 498 NPLFDYLD 505


>sp|RBL_PYRHO|RIBULOSE bisphosphate carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FHPLFEYFDY 10
FHP +EY +
Sbjct: 123 FHPPYEYLRH 132


>sp|THIC_METMP|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 HPLFEYFDY 10
+PL++ FDY
Sbjct: 201 NPLYKEFDY 209


>sp|THIC_METM7|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C7 /

Query: 2 HPLFEYFDY 10
+PL++ FDY
Sbjct: 201 NPLYKEFDY 209


>sp|THIC_METM6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C6 /

Query: 2 HPLFEYFDY 10
+PL++ FDY
Sbjct: 201 NPLYKEFDY 209


>sp|THIC_METM5|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C5 /

Query: 2 HPLFEYFDY 10
+PL++ FDY
Sbjct: 201 NPLYKEFDY 209


>sp|THIC_METJA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HPLFEYFDY 10
+PL++ FDY
Sbjct: 201 NPLYKNFDY 209


>sp|THIC_META3|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 HPLFEYFDY 10
+PL+ FDY
Sbjct: 201 NPLYSQFDY 209


>sp|THIC2_METMA|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HPLFEYFDY 10
+PL+ FDY
Sbjct: 201 NPLYSQFDY 209


>sp|RBL_PYRFU|RIBULOSE bisphosphate carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FHPLFEYFDY 10
FHP +EY +
Sbjct: 118 FHPPYEYLRH 127


>sp|PGK_THEAC|PHOSPHOGLYCERATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PLFEYF 8
PLF+YF
Sbjct: 142 PLFDYF 147


>sp|PGK_METJA|PHOSPHOGLYCERATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PLFEYF 8
PLF+YF
Sbjct: 151 PLFDYF 156


>sp|THIC_METLZ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 HPLFEYFDY 10
+PL+ FDY
Sbjct: 201 NPLYRRFDY 209


>sp|RBL_PYRAB|RIBULOSE bisphosphate carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 FHPLFEYFDY 10
FHP +EY +
Sbjct: 122 FHPPYEYLRH 131


>sp|THIC_METMJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 HPLFEYFDY 10
+PL+ FDY
Sbjct: 201 NPLYSEFDY 209


>sp|THIC_METB6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoregula boonei (strain DSM 21154

Query: 2 HPLFEYFDY 10
+PL+ FDY
Sbjct: 201 NPLYSEFDY 209


>sp|TRPD_NITMS|ANTHRANILATE phosphoribosyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 LFEYFDY 10
+FEYF Y
Sbjct: 124 IFEYFGY 130


>sp|THIC_METPE|PHOSPHOMETHYLPYRIMIDINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 HPLFEYFDY 10
+PL+ FDY
Sbjct: 201 NPLYAEFDY 209


>sp|THIC_METHJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 HPLFEYFDY 10
+PL+ FDY
Sbjct: 201 NPLYAEFDY 209


>sp|THIC2_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 HPLFEYFDY 10
+PL+ FDY
Sbjct: 201 NPLYANFDY 209


>sp|THIC1_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina barkeri (strain Fusaro /

Query: 2 HPLFEYFDY 10
+PL+ FDY
Sbjct: 201 NPLYANFDY 209


>sp|THIC_METVS|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 HPLFEYFDY 10
+PL+ FDY
Sbjct: 201 NPLYRDFDY 209


>sp|PYRG_METST|CTP synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 HPLFEYF 8
HPLF+ F
Sbjct: 516 HPLFKSF 522


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 FHPLFEYFDY 10
F P EYF+Y
Sbjct: 675 FSPNEEYFNY 684


>sp|HYD1G_PYRFU|SULFHYDROGENASE 1 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PLFEYFD 9
P+F YFD
Sbjct: 277 PVFTYFD 283


>sp|SYH_META3|HISTIDINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 PLFEYFD 9
P FEYF+
Sbjct: 41 PTFEYFE 47


>sp|HIS5_METBF|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina barkeri (strain

Query: 2 HPLFE 6
HPLFE
Sbjct: 129 HPLFE 133


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 HPLFEY 7
HP FEY
Sbjct: 237 HPEFEY 242


>sp|TRM1_PYRAR|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum arsenaticum

Query: 1 FHPLFEYFD 9
F PLF Y++
Sbjct: 206 FEPLFAYWE 214


>sp|G1PDH_META3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus aeolicus (strain ATCC

Query: 5 FEYFDY 10
F YFDY
Sbjct: 48 FYYFDY 53


>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 FEYFDY 10
FEY++Y
Sbjct: 315 FEYYEY 320


>sp|Y966_METJA|UNCHARACTERIZED protein MJ0966|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FHPLFEYFD 9
F P+ E+FD
Sbjct: 97 FFPIAEFFD 105


>sp|ATGT_META3|TRNA-GUANINE(15) transglycosylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 PLFEYFDY 10
PL E +DY
Sbjct: 197 PLMENYDY 204


>sp|COBQ_METJA|PROBABLE cobyric acid synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FHPLFEYFDY 10
FH +FE +++
Sbjct: 435 FHGIFENYEF 444


>sp|ATGT_THEAC|TRNA-GUANINE(15) transglycosylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PLFEYFDY 10
PL E +DY
Sbjct: 189 PLLETYDY 196


>sp|SYE_NATPD|GLUTAMATE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 LFEYFDY 10
++EYFD+
Sbjct: 322 VYEYFDW 328


>sp|CMR1B_PYRFU|CRISPR system Cmr subunit Cmr1-2|Pyrococcus furiosus (strain ATCC 43587

Query: 5 FEYFD 9
FEYFD
Sbjct: 129 FEYFD 133




86|Sequence|426|435|EYFDYESRKS

>sp|DGGGP_THESM|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus sibiricus (strain DSM 12597

Query: 1 EYFDYESRK 9
+YFDYE K
Sbjct: 58 DYFDYEIDK 66


>sp|DGGGP_THEON|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus onnurineus (strain NA1)

Query: 1 EYFDYESRK 9
+YFDYE K
Sbjct: 58 DYFDYEIDK 66


>sp|DGGGP_THEKO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EYFDYESRK 9
+YFDYE K
Sbjct: 58 DYFDYEIDK 66


>sp|DGGGP_PYRFU|DIGERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EYFDYESRK 9
+YFDYE K
Sbjct: 58 DYFDYEIDK 66


>sp|DGGGP_THEGJ|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 EYFDYE 6
+YFDYE
Sbjct: 58 DYFDYE 63


>sp|DGGGP_ARCFU|DIGERANYLGERANYLGLYCERYL phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EYFDYE 6
+YFDYE
Sbjct: 68 DYFDYE 73


>sp|ISCS1_ARCFU|CYSTEINE desulfurase IscS 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YFDYESRK 9
YFDY S K
Sbjct: 3 YFDYASTK 10


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 2 YFDYESR 8
Y DYES+
Sbjct: 186 YLDYESK 192


>sp|ISCS2_ARCFU|CYSTEINE desulfurase IscS 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YFDYESRK 9
YFDY S K
Sbjct: 3 YFDYTSAK 10


>sp|PUR5_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FDYESRK 9
++YESRK
Sbjct: 203 YEYESRK 209


>sp|DGGGP_METST|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 EYFDYE 6
+Y+DYE
Sbjct: 53 DYYDYE 58


>sp|PGP_ARCFU|PHOSPHOGLYCOLATE phosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EYFDYESRKS 10
E D+E RKS
Sbjct: 100 ELLDFEYRKS 109


>sp|ARGX_SULAC|GLUTAMATE--LYSW ligase ArgX|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EYFDYESR 8
EY +Y+SR
Sbjct: 168 EYINYKSR 175


>sp|TOP6A_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YFDYESR 8
YFD ESR
Sbjct: 53 YFDEESR 59




87|Sequence|431|440|ESRKSMSCYV

>sp|SIHH_METAC|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ESRKSMSCY 9
++RK++SC+
Sbjct: 85 DTRKNISCF 93


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 3 RKSMSCY 9
RKS CY
Sbjct: 4 RKSFDCY 10


>sp|MTMB_METMA|MONOMETHYLAMINE methyltransferase MtmB|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 RKSMSCY 9
RKS CY
Sbjct: 4 RKSFDCY 10


>sp|MTMB2_METBF|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri (strain Fusaro /

Query: 3 RKSMSCY 9
RKS CY
Sbjct: 4 RKSFDCY 10


>sp|MTMB1_METBF|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri (strain Fusaro /

Query: 3 RKSMSCY 9
RKS CY
Sbjct: 4 RKSFDCY 10


>sp|MTMB3_METBF|MONOMETHYLAMINE methyltransferase MtmB3|Methanosarcina barkeri (strain Fusaro /

Query: 3 RKSMSCY 9
RKS CY
Sbjct: 4 RKSFDCY 10


>sp|MTMB1_METBA|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri

Query: 3 RKSMSCY 9
RKS CY
Sbjct: 4 RKSFDCY 10




88|Sequence|436|445|MSCYVLSNVL

>sp|RL21_PICTO|LARGE ribosomal subunit protein eL21|Picrophilus torridus (strain ATCC

Query: 2 SCYVLS 7
SCY+LS
Sbjct: 71 SCYILS 76




89|Sequence|441|450|LSNVLDYNTE

>sp|TTUA_PYRHO|TRNA-5-METHYLURIDINE(54) 2-sulfurtransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LSNVLDYNTE 10
L+N+L +NTE
Sbjct: 165 LNNILHWNTE 174


>sp|HMGCS_METTL|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothermococcus thermolithotrophicus

Query: 1 LSNVLDYNTE 10
LSN+LD+ E
Sbjct: 280 LSNILDHAEE 289


>sp|HMGCS_PICTO|HYDROXYMETHYLGLUTARYL-COA synthase|Picrophilus torridus (strain ATCC 700027

Query: 3 NVLDYNTE 10
N+LDY+ E
Sbjct: 310 NILDYHRE 317


>sp|Y932_METKA|UNCHARACTERIZED protein MK0932|Methanopyrus kandleri (strain AV19 /

Query: 1 LSNVLDYNT 9
L +V+DY+T
Sbjct: 55 LDSVMDYDT 63


>sp|HMGCS_METVS|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LSNVLDYN 8
LSN+LD++
Sbjct: 280 LSNILDHS 287


>sp|Y602_METJA|UNCHARACTERIZED protein MJ0602|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VLDYNTE 10
VLDYN+E
Sbjct: 137 VLDYNSE 143


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 4 VLDYNTE 10
VLDY TE
Sbjct: 124 VLDYTTE 130




90|Sequence|446|455|DYNTEIVSQD

>sp|CFBA_METAC|SIROHYDROCHLORIN cobaltochelatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 YNTEIVSQ 9
YN E+VSQ
Sbjct: 18 YNKEVVSQ 25


>sp|CHED_ARCFU|PROBABLE chemoreceptor glutamine deamidase CheD|Archaeoglobus fulgidus

Query: 1 DYNTEIVSQD 10
DY IVS+D
Sbjct: 118 DYGIRIVSED 127


>sp|CFBA_METBF|SIROHYDROCHLORIN cobaltochelatase|Methanosarcina barkeri (strain Fusaro /

Query: 2 YNTEIVSQ 9
YN E+V+Q
Sbjct: 18 YNKEVVTQ 25


>sp|CFBA_METMA|SIROHYDROCHLORIN cobaltochelatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 YNTEIVSQ 9
YN E+V+Q
Sbjct: 18 YNKEVVTQ 25


>sp|PUR1_ARCFU|AMIDOPHOSPHORIBOSYLTRANSFERASE fulgidus (strain ATCC 49558

Query: 1 DYNTEIVSQ 9
D +TE++SQ
Sbjct: 126 DSDTEVISQ 134


>sp|CFBA_METBU|SIROHYDROCHLORIN cobaltochelatase|Methanococcoides burtonii (strain DSM 6242

Query: 2 YNTEIVSQ 9
YN E+VS+
Sbjct: 18 YNKEVVSE 25


>sp|PGK_AERPE|PHOSPHOGLYCERATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 3 NTEIVSQD 10
NT I+S+D
Sbjct: 122 NTRIISED 129


>sp|MSRA_METMP|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 1 DYNTEIVSQD 10
DY+ EI+S D
Sbjct: 61 DYDPEIISYD 70


>sp|FWDC_METTH|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 2 YNTEIVSQD 10
YNT+ + QD
Sbjct: 74 YNTKRIGQD 82




91|Sequence|451|460|IVSQDQVDSI

>sp|SPEE_SACS2|POLYAMINE aminopropyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 IVSQDQVDS 9
++S+D+VDS
Sbjct: 244 LLSEDEVDS 252


>sp|Y088_METS3|UPF0280 protein Msm_0088|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 IVSQDQVDSI 10
I+SQD V SI
Sbjct: 213 IISQDNVGSI 222


>sp|Y280_METSM|UPF0280 protein ORFE|Methanobrevibacter smithii

Query: 1 IVSQDQVDSI 10
I+SQD V SI
Sbjct: 212 IISQDNVGSI 221


>sp|RL1_PYRNV|LARGE ribosomal subunit protein uL1|Pyrobaculum neutrophilum (strain

Query: 1 IVSQDQVDSI 10
++S+DQV+ +
Sbjct: 83 VISRDQVEGL 92


>sp|FAEHP_METBF|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina barkeri (strain Fusaro /

Query: 1 IVSQDQVDSI 10
++S+DQV+ I
Sbjct: 98 VISKDQVEEI 107


>sp|RPIA_THEKO|RIBOSE-5-PHOSPHATE isomerase A|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IVSQDQVDSI 10
+VS D+VD+I
Sbjct: 71 VVSLDEVDAI 80




92|Sequence|456|465|QVDSIMNLVS

>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 1 QVDSIMNLVS 10
+++SIM+LVS
Sbjct: 972 EIESIMDLVS 981


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 QVDSIMNLVS 10
+++SIM+L+S
Sbjct: 965 ELESIMDLIS 974


>sp|FTTA_LOKSG|TRANSCRIPTION termination factor FttA|Lokiarchaeum sp. (strain GC14_75)

Query: 3 DSIMNLVS 10
D IMNL+S
Sbjct: 80 DYIMNLIS 87


>sp|RNZ_PICTO|RIBONUCLEASE Z|Picrophilus torridus (strain ATCC 700027

Query: 1 QVDSIMNL 8
QVD+I+NL
Sbjct: 29 QVDNIVNL 36




93|Sequence|461|470|MNLVSTLIQD

>sp|PTH_SULTO|PEPTIDYL-TRNA hydrolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 MNLVSTLIQD 10
+NL +T+IQD
Sbjct: 78 LNLPTTIIQD 87


>sp|MDH_METKA|MALATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 NLVSTLIQD 10
NLV T++QD
Sbjct: 238 NLVRTILQD 246


>sp|DAPB_METHJ|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 MNLVSTLIQD 10
MN++ TLI+D
Sbjct: 122 MNILWTLIRD 131


>sp|ASPG_THEKO|L-ASPARAGINASE kodakarensis (strain ATCC BAA-918

Query: 1 MNLVSTLIQ 9
+NL STLIQ
Sbjct: 50 LNLDSTLIQ 58


>sp|PTH_PYRAB|PEPTIDYL-TRNA hydrolase|Pyrococcus abyssi (strain GE5 /

Query: 1 MNLVSTLIQD 10
+NL + LIQD
Sbjct: 75 LNLPTALIQD 84


>sp|TBP_AERPE|TATA-BOX-BINDING protein|Aeropyrum pernix (strain ATCC 700893

Query: 1 MNLVSTLIQD 10
+NL+ T IQD
Sbjct: 40 LNLIETKIQD 49




94|Sequence|466|475|TLIQDQPDQP

>sp|GGGPS_META3|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 TLIQDQPD 8
TLI+D PD
Sbjct: 224 TLIEDNPD 231


>sp|NAR7_HALMT|PUTATIVE respiratory nitrate reductase heme|Haloferax mediterranei (strain

Query: 2 LIQDQPDQP 10
L +DQP QP
Sbjct: 45 LAEDQPQQP 53


>sp|TRPB2_METAC|TRYPTOPHAN synthase beta chain 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LIQDQPDQP 10
++Q+QPD P
Sbjct: 205 ILQEQPDTP 213


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 2 LIQDQPDQP 10
++D PD P
Sbjct: 738 FVEDPPDNP 746


>sp|DNLI_METTH|DNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 6 QPDQP 10
QPDQP
Sbjct: 556 QPDQP 560


>sp|MVHA_METFE|F420-NON-REDUCING hydrogenase subunit A|Methanothermus fervidus

Query: 2 LIQDQPD 8
+IQD PD
Sbjct: 133 IIQDSPD 139


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 TLIQDQPD 8
TL++D PD
Sbjct: 599 TLLEDLPD 606


>sp|DHAS_ARCFU|ASPARTATE-SEMIALDEHYDE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LIQDQPDQP 10
+++++PD+P
Sbjct: 278 IVREEPDRP 286


>sp|TRPB2_METMA|TRYPTOPHAN synthase beta chain 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LIQDQPDQP 10
++++QPD P
Sbjct: 205 ILKEQPDTP 213




95|Sequence|471|480|QPDQPVEDPD

>sp|FWDC_METTM|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 1 QPDQPVEDPD 10
QP+ P+E P+
Sbjct: 11 QPEVPLEAPN 20


>sp|FWDC_METTH|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 1 QPDQPVEDPD 10
QP+ P+E P+
Sbjct: 11 QPEVPLEAPN 20


>sp|FWDC_METWO|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 1 QPDQPVEDPD 10
QP+ P+E P+
Sbjct: 11 QPEVPLEAPN 20


>sp|TRPA_METJA|TRYPTOPHAN synthase alpha chain|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PDQPVEDPD 10
PD P+E+ D
Sbjct: 129 PDLPIEEAD 137


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 2 PDQPVEDPD 10
P++ +EDPD
Sbjct: 587 PEEIMEDPD 595


>sp|MTBB3_METBA|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina barkeri

Query: 2 PDQPVEDP 9
PD P E+P
Sbjct: 111 PDGPFENP 118


>sp|DAPAL_PYRAR|UNCHARACTERIZED DapA-like lyase Pars_0992|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 QPDQPVEDPD 10
+P PVED D
Sbjct: 278 EPLPPVEDKD 287


>sp|MTBB1_METMA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PDQPVEDP 9
PD P E+P
Sbjct: 159 PDGPFENP 166


>sp|METXA_METEZ|HOMOSERINE O-acetyltransferase|Methanohalobium evestigatum (strain ATCC

Query: 1 QPDQPVE 7
+PD+P+E
Sbjct: 444 RPDEPIE 450


>sp|MTBB2_METBA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri

Query: 2 PDQPVEDP 9
PD P E+P
Sbjct: 111 PDGPFENP 118


>sp|Y1001_ARCFU|UNCHARACTERIZED protein AF_1001|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DQPVED 8
D+PVED
Sbjct: 149 DEPVED 154


>sp|RS3_METJA|SMALL ribosomal subunit protein uS3|Methanocaldococcus jannaschii

Query: 4 QPVEDPD 10
+PVE+PD
Sbjct: 82 KPVENPD 88


>sp|MTBB2_METAC|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina acetivorans (strain ATCC

Query: 2 PDQPVEDP 9
PD P E+P
Sbjct: 159 PDGPFENP 166


>sp|MTBB2_METBF|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri (strain Fusaro /

Query: 2 PDQPVEDP 9
PD P E+P
Sbjct: 159 PDGPFENP 166


>sp|MTBB1_METBA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri

Query: 2 PDQPVEDP 9
PD P E+P
Sbjct: 159 PDGPFENP 166


>sp|Y310_ARCFU|UNCHARACTERIZED protein AF_0310|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DQPVEDPD 10
DQPV+D D
Sbjct: 179 DQPVQDVD 186


>sp|MTBB3_METAC|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina acetivorans (strain ATCC

Query: 2 PDQPVEDP 9
PD P E+P
Sbjct: 159 PDGPFENP 166


>sp|MTBB1_METBF|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri (strain Fusaro /

Query: 2 PDQPVEDP 9
PD P E+P
Sbjct: 159 PDGPFENP 166


>sp|MTBB3_METMA|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PDQPVEDP 9
PD P E+P
Sbjct: 159 PDGPFENP 166


>sp|MTBB2_METMA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PDQPVEDP 9
PD P E+P
Sbjct: 159 PDGPFENP 166


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DQPVEDPD 10
D PVED D
Sbjct: 186 DNPVEDHD 193


>sp|MTBB1_METAC|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina acetivorans (strain ATCC

Query: 2 PDQPVEDP 9
PD P E+P
Sbjct: 159 PDGPFENP 166


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 DQPVEDPD 10
D PVED D
Sbjct: 191 DNPVEDHD 198


>sp|EF1A_METHJ|ELONGATION factor 1-alpha|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PDQPVEDP 9
PD+P E P
Sbjct: 217 PDKPTEKP 224


>sp|SYFB_METS5|PHENYLALANINE--TRNA ligase beta subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 QPDQPVEDPD 10
+P PV+D D
Sbjct: 72 EPSYPVKDTD 81


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 DQPVEDPD 10
D PVED D
Sbjct: 186 DNPVEDHD 193


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 2 PDQPVEDPD 10
PD EDPD
Sbjct: 345 PDMTDEDPD 353




96|Sequence|476|485|VEDPDPEDFA

>sp|AATI_METTH|A-TYPE ATP synthase subunit I|Methanothermobacter thermautotrophicus

Query: 1 VEDPDPED 8
+EDPDPE+
Sbjct: 341 LEDPDPEE 348


>sp|GLNA_HALSA|GLUTAMINE synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 3 DPDPEDFA 10
DPDPE FA
Sbjct: 80 DPDPETFA 87


>sp|FTHS_HALWD|FORMATE--TETRAHYDROFOLATE ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VEDPDPEDF 9
VE DPEDF
Sbjct: 450 VESSDPEDF 458


>sp|HERA_PYRFU|DNA double-strand break repair helicase|Pyrococcus furiosus (strain

Query: 1 VEDPDPEDFA 10
+ED DPE+ A
Sbjct: 214 IEDLDPEELA 223


>sp|BACR2_HALMA|BACTERIORHODOPSIN-II marismortui (strain ATCC 43049

Query: 1 VEDPDPEDF 9
V+DP+ E+F
Sbjct: 39 VQDPEQEEF 47


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 EDPDPEDF 9
E P PEDF
Sbjct: 726 EPPKPEDF 733


>sp|Y2165_ARCFU|UNCHARACTERIZED protein AF_2165|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DPDPEDFA 10
DPD +DF
Sbjct: 80 DPDVDDFG 87


>sp|EF2_ARCFU|ELONGATION factor 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VEDPDPEDF 9
+E P PEDF
Sbjct: 717 LEMPKPEDF 725


>sp|SYC_METM6|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 EDPDPEDFA 10
E +PEDFA
Sbjct: 173 EKKNPEDFA 181


>sp|PUR5_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VEDPDPE 7
VE PDPE
Sbjct: 103 VEQPDPE 109


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 2 EDPDPEDF 9
E P PEDF
Sbjct: 726 EPPRPEDF 733


>sp|TRPC_THEKO|INDOLE-3-GLYCEROL phosphate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VEDPDPEDF 9
++ PDPE+F
Sbjct: 210 MKTPDPEEF 218


>sp|ARGC_METAR|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 2 EDPDPEDFA 10
EDPDP A
Sbjct: 58 EDPDPAKIA 66


>sp|SYC_METM7|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 EDPDPEDFA 10
E +PEDFA
Sbjct: 173 EKKNPEDFA 181


>sp|PAIA_THEAC|SPERMIDINE N(1)-acetyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VEDPDPEDF 9
VED D DF
Sbjct: 145 VEDTDGSDF 153


>sp|AATD_HALLT|A-TYPE ATP synthase subunit D|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 VEDPDPED 8
VEDP+P D
Sbjct: 221 VEDPEPAD 228


>sp|ACDA2_METKA|PUTATIVE acetyl-CoA decarbonylase/synthase complex subunit|Methanopyrus

Query: 1 VEDPDPEDF 9
VEDP PE
Sbjct: 532 VEDPTPEHL 540


>sp|PURL_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanopyrus kandleri (strain AV19 /

Query: 1 VEDPDPEDF 9
V +PDPED
Sbjct: 377 VPEPDPEDL 385


>sp|PYRB_METKA|ASPARTATE carbamoyltransferase catalytic subunit|Methanopyrus kandleri

Query: 4 PDPEDF 9
PDPE+F
Sbjct: 236 PDPEEF 241


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DPDPEDF 9
DPD ED+
Sbjct: 214 DPDTEDY 220


>sp|RL1_SULAC|LARGE ribosomal subunit protein uL1|Sulfolobus acidocaldarius (strain

Query: 2 EDPDPEDFA 10
ED PED A
Sbjct: 175 EDMKPEDLA 183


>sp|AATB_PYRAR|A-TYPE ATP synthase subunit B|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 PDPEDF 9
P PEDF
Sbjct: 106 PPPEDF 111


>sp|AATB_PYRNV|A-TYPE ATP synthase subunit B|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 PDPEDF 9
P PEDF
Sbjct: 106 PPPEDF 111


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VEDPDPEDF 9
++ PD EDF
Sbjct: 204 IQVPDVEDF 212


>sp|AATB_PYRCJ|A-TYPE ATP synthase subunit B|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 PDPEDF 9
P PEDF
Sbjct: 106 PPPEDF 111


>sp|AATB_PYRIL|A-TYPE ATP synthase subunit B|Pyrobaculum islandicum (strain DSM 4184

Query: 4 PDPEDF 9
P PEDF
Sbjct: 106 PPPEDF 111


>sp|AATB_PYRAE|A-TYPE ATP synthase subunit B|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PDPEDF 9
P PEDF
Sbjct: 106 PPPEDF 111


>sp|TRUD_THEVO|PROBABLE tRNA pseudouridine synthase D|Thermoplasma volcanium (strain ATCC

Query: 5 DPEDFA 10
DPEDF+
Sbjct: 16 DPEDFS 21


>sp|SURE_NATPD|5'-NUCLEOTIDASE SurE|Natronomonas pharaonis (strain ATCC 35678

Query: 3 DPDPEDFA 10
DPD DFA
Sbjct: 134 DPDKTDFA 141


>sp|Y1214_METKA|UPF0210 protein MK1214|Methanopyrus kandleri (strain AV19 /

Query: 4 PDPEDFA 10
PDPE+ A
Sbjct: 38 PDPEELA 44


>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 EDPDPEDFA 10
ED DP+D A
Sbjct: 514 EDQDPKDRA 522




97|Sequence|481|490|PEDFADEQSL

>sp|NIFH2_METIV|NITROGENASE iron protein 2|Methanobacterium ivanovii

Query: 2 EDFADE 7
EDFADE
Sbjct: 136 EDFADE 141


>sp|Y967_METJA|UNCHARACTERIZED protein MJ0967|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PEDFADEQ 8
P+DF DE+
Sbjct: 40 PKDFRDEE 47


>sp|NIFH2_METTH|NITROGENASE iron protein 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 EDFADE 7
EDFADE
Sbjct: 135 EDFADE 140


>sp|SAT_CENSY|SULFATE adenylyltransferase|Cenarchaeum symbiosum (strain A)

Query: 1 PEDFADE 7
P DFADE
Sbjct: 222 PGDFADE 228


>sp|RL10_THEKO|LARGE ribosomal subunit protein uL10|Thermococcus kodakarensis (strain

Query: 1 PEDFADEQS 9
PED DE++
Sbjct: 283 PEDLLDEKT 291


>sp|HIS82_ARCFU|HISTIDINOL-PHOSPHATE aminotransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PEDFADEQ 8
PEDF D++
Sbjct: 17 PEDFPDKE 24


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 PEDFADE 7
P DFADE
Sbjct: 416 PLDFADE 422




98|Sequence|486|495|DEQSLVGRFI

>sp|SURE_HALWD|5'-NUCLEOTIDASE SurE|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DEQSLVGR 8
D+QS VGR
Sbjct: 40 DDQSAVGR 47


>sp|SURE_NATPD|5'-NUCLEOTIDASE SurE|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DEQSLVGR 8
D+QS VGR
Sbjct: 36 DDQSAVGR 43


>sp|NIFH_METHJ|NITROGENASE iron protein|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DEQSLVGRF 9
DE+ LVG F
Sbjct: 189 DEEKLVGAF 197


>sp|TSGDD_HALVD|GLUCOSE import ATP-binding protein TsgD13|Haloferax volcanii (strain ATCC

Query: 3 QSLVGRF 9
QSL GRF
Sbjct: 134 QSLAGRF 140


>sp|RS2_PICTO|SMALL ribosomal subunit protein uS2|Picrophilus torridus (strain ATCC

Query: 3 QSLVGRFI 10
+S++GRFI
Sbjct: 91 KSIIGRFI 98


>sp|RL1_METS3|LARGE ribosomal subunit protein uL1|Methanobrevibacter smithii (strain

Query: 1 DEQSLVGRFI 10
D LVGRF+
Sbjct: 110 DMMPLVGRFL 119


>sp|MCH_HALSA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DEQSLVGR 8
DEQ+ +GR
Sbjct: 216 DEQTAIGR 223


>sp|MCH_HALS3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DEQSLVGR 8
DEQ+ +GR
Sbjct: 216 DEQTAIGR 223


>sp|KAD_HALSA|ADENYLATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DEQSLVGRF 9
DE LVGR
Sbjct: 115 DEDELVGRL 123


>sp|KAD_HALS3|ADENYLATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DEQSLVGRF 9
DE LVGR
Sbjct: 115 DEDELVGRL 123




99|Sequence|491|500|VGRFIHLLRS

>sp|Y2001_METTM|UNCHARACTERIZED protein MTBMA_p00010|Methanothermobacter marburgensis (strain ATCC

Query: 3 RFIHLLRS 10
R++H+LRS
Sbjct: 214 RYVHILRS 221


>sp|GUAAA_METKA|GMP synthase [glutamine-hydrolyzing] subunit A|Methanopyrus kandleri

Query: 2 GRFIHLLR 9
G+++HL+R
Sbjct: 9 GQYVHLIR 16


>sp|AMTAB_METJA|PROBABLE threonylcarbamoyladenosine tRNA

Query: 1 VGRFIHL 7
VG+F+HL
Sbjct: 254 VGKFLHL 260


>sp|SRP19_HALWD|SIGNAL recognition particle 19 kDa|Haloquadratum walsbyi (strain DSM

Query: 1 VGRFIHLLR 9
V +IHLLR
Sbjct: 84 VAAYIHLLR 92


>sp|CCA_ARCFU|CCA-ADDING enzyme|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VGRFIHLLR 9
+ RF+HL R
Sbjct: 235 LARFVHLCR 243


>sp|AATI_THEKO|A-TYPE ATP synthase subunit I|Thermococcus kodakarensis (strain ATCC

Query: 1 VGRFIHLLR 9
+G F+H LR
Sbjct: 621 LGAFVHALR 629


>sp|DAPAL_THEPD|UNCHARACTERIZED DapA-like lyase Tpen_1666|Thermofilum pendens (strain DSM 2475

Query: 2 GRFIHLLR 9
G F+HL R
Sbjct: 49 GEFVHLSR 56


>sp|AATI_PYRAB|A-TYPE ATP synthase subunit I|Pyrococcus abyssi (strain GE5 /

Query: 1 VGRFIHLLR 9
+G F+H LR
Sbjct: 617 LGAFVHALR 625


>sp|AATI_PYRHO|A-TYPE ATP synthase subunit I|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VGRFIHLLR 9
+G F+H LR
Sbjct: 617 LGAFVHALR 625




100|Sequence|496|505|HLLRSEDPDQ

>sp|PIP_THEVO|PROLINE iminopeptidase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HLLRSED 7
HLLRSED
Sbjct: 183 HLLRSED 189


>sp|PDXS_SULAC|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Sulfolobus acidocaldarius

Query: 2 LLRSEDPDQ 10
+ +S+DPDQ
Sbjct: 278 IFKSQDPDQ 286


>sp|PIP_THEAC|PROLINE iminopeptidase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HLLRSED 7
HLLRSED
Sbjct: 181 HLLRSED 187


Query: 4 RSEDPDQ 10
RSE+PDQ
Sbjct: 68 RSEEPDQ 74


>sp|DGGGP_IGNH4|DIGERANYLGERANYLGLYCERYL phosphate synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 LRSEDP 8
LRSEDP
Sbjct: 254 LRSEDP 259


>sp|CEDB_SULAC|DNA import protein CedB|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LLRSEDPD 9
LLRSED D
Sbjct: 488 LLRSEDRD 495


>sp|PDXS_SACI1|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 2 LLRSEDPDQ 10
+ +S+DPD+
Sbjct: 280 IFKSQDPDE 288


>sp|PDXS_SACI7|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 2 LLRSEDPDQ 10
+ +S+DPD+
Sbjct: 280 IFKSQDPDE 288


>sp|PDXS_SACI6|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 2 LLRSEDPDQ 10
+ +S+DPD+
Sbjct: 280 IFKSQDPDE 288


>sp|PDXS_SACI4|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 2 LLRSEDPDQ 10
+ +S+DPD+
Sbjct: 280 IFKSQDPDE 288


>sp|PDXS_SACI3|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 2 LLRSEDPDQ 10
+ +S+DPD+
Sbjct: 280 IFKSQDPDE 288


>sp|PDXS_SACI2|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 2 LLRSEDPDQ 10
+ +S+DPD+
Sbjct: 280 IFKSQDPDE 288


>sp|HUTU_HALSA|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 3 LRSEDPD 9
LR EDPD
Sbjct: 298 LRDEDPD 304


>sp|HUTU_HALS3|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 29341

Query: 3 LRSEDPD 9
LR EDPD
Sbjct: 298 LRDEDPD 304


>sp|PDXS_SACS2|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus solfataricus

Query: 2 LLRSEDPDQ 10
+ +S+DPD+
Sbjct: 280 IFKSQDPDE 288


>sp|RPO3_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus abyssi (strain GE5 /

Query: 3 LRSEDPD 9
L+S+DPD
Sbjct: 104 LKSDDPD 110


>sp|RPO3_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus horikoshii (strain ATCC

Query: 3 LRSEDPD 9
L+S+DPD
Sbjct: 104 LKSDDPD 110


>sp|DHQS_HALSA|3-DEHYDROQUINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 LLRSEDPDQ 10
LL S+DPD+
Sbjct: 184 LLDSDDPDE 192


>sp|DHQS_HALS3|3-DEHYDROQUINATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 LLRSEDPDQ 10
LL S+DPD+
Sbjct: 184 LLDSDDPDE 192


>sp|RPO3_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LRSEDPD 9
L+S+DPD
Sbjct: 106 LKSDDPD 112


>sp|G6PI_HALSA|PROBABLE glucose-6-phosphate isomerase|Halobacterium salinarum (strain ATCC

Query: 2 LLRSEDP 8
LLR EDP
Sbjct: 410 LLRGEDP 416


>sp|DNLI_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 2 LLRSEDPDQ 10
LL S+DPD+
Sbjct: 406 LLLSDDPDE 414




101|Sequence|501|510|EDPDQQYLIL

>sp|GATA_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcoides burtonii (strain DSM

Query: 1 EDPDQQYLI 9
EDP QYLI
Sbjct: 404 EDPLSQYLI 412


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EDPDQQYLI 9
EDP QY+I
Sbjct: 34 EDPRPQYII 42


>sp|LYSX_SULAC|ALPHA-AMINOADIPATE--LYSW ligase LysX|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EDPDQQYLI 9
EDP++ YL+
Sbjct: 234 EDPERGYLV 242


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EDPDQQYLI 9
EDP QY+I
Sbjct: 34 EDPRPQYII 42


>sp|BIOB_NATPD|BIOTIN synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DPDQQYL 8
DPD+Q+L
Sbjct: 290 DPDEQHL 296


>sp|GLCD1_CALMQ|GLUCOSE 1-dehydrogenase 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 PDQQYLIL 10
P QYLIL
Sbjct: 55 PGSQYLIL 62


>sp|WECC_PYRHO|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EDPDQQYL 8
+DPD YL
Sbjct: 90 DDPDLSYL 97


>sp|LYSX_SULTO|ALPHA-AMINOADIPATE--LYSW ligase LysX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EDPDQQYLI 9
EDP++ Y+I
Sbjct: 243 EDPERGYII 251


>sp|SECY_METTH|PROTEIN translocase subunit SecY|Methanothermobacter thermautotrophicus

Query: 1 EDPDQQYLIL 10
+ PD QY +L
Sbjct: 218 QSPDFQYYVL 227


>sp|GLNA_ARCFU|GLUTAMINE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DPDQQYLI 9
DPD +Y++
Sbjct: 306 DPDDEYML 313


>sp|Y1049_METJA|UNCHARACTERIZED protein MJ1049|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDPDQQYLIL 10
E PD++Y+++
Sbjct: 21 EVPDEEYIVI 30




102|Sequence|506|515|QYLILNTARK

>sp|FPRA_METTM|COENZYME F420H(2) oxidase|Methanothermobacter marburgensis (strain ATCC

Query: 1 QYLILNTARK 10
+Y++++ ARK
Sbjct: 188 EYILMDAARK 197




103|Sequence|511|520|NTARKHFGAG

>sp|PYRF_PYRHO|OROTIDINE 5'-phosphate decarboxylase|Pyrococcus horikoshii (strain ATCC

Query: 3 ARKHFGAG 10
ARK FGAG
Sbjct: 71 ARKVFGAG 78


>sp|Y163_ARCFU|UNCHARACTERIZED protein AF_0163|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TARKHFGAG 10
T HFGAG
Sbjct: 40 TVPTHFGAG 48


>sp|HELS_METAC|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 ARKHFGAG 10
ARK +GAG
Sbjct: 663 ARKLYGAG 670


>sp|DAPA_METJA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 RKHFG 8
RKHFG
Sbjct: 115 RKHFG 119


>sp|RL31_SULTO|LARGE ribosomal subunit protein eL31|Sulfurisphaera tokodaii (strain

Query: 1 NTARKHFGA 9
N ++HFGA
Sbjct: 34 NIVQRHFGA 42


>sp|RS7_PYRHO|SMALL ribosomal subunit protein uS7|Pyrococcus horikoshii (strain ATCC

Query: 3 ARKHFG 8
A+KHFG
Sbjct: 55 AKKHFG 60


>sp|RS7_PYRAB|SMALL ribosomal subunit protein uS7|Pyrococcus abyssi (strain GE5 /

Query: 3 ARKHFG 8
A+KHFG
Sbjct: 52 AKKHFG 57


>sp|RS7_PYRFU|SMALL ribosomal subunit protein uS7|Pyrococcus furiosus (strain ATCC

Query: 3 ARKHFG 8
A+KHFG
Sbjct: 52 AKKHFG 57




104|Sequence|516|525|HFGAGGNQRI

>sp|Y163_ARCFU|UNCHARACTERIZED protein AF_0163|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HFGAGG 6
HFGAGG
Sbjct: 44 HFGAGG 49


>sp|FTSZ1_METJA|CELL division protein FtsZ 1|Methanocaldococcus jannaschii (strain ATCC

Query: 2 FGAGGNQRI 10
GAGGN +I
Sbjct: 95 LGAGGNPKI 103


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 4 AGGNQR 9
AGGNQR
Sbjct: 717 AGGNQR 722


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 4 AGGNQR 9
AGGNQR
Sbjct: 686 AGGNQR 691


>sp|RL30_PYRAR|LARGE ribosomal subunit protein uL30|Pyrobaculum arsenaticum (strain DSM

Query: 1 HFGAGGN 7
HF AGG+
Sbjct: 154 HFAAGGD 160


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HFGAGGNQRI 10
HF GG ++I
Sbjct: 323 HFPIGGKEKI 332


>sp|TRUD1_METJA|PROBABLE tRNA pseudouridine synthase D|Methanocaldococcus jannaschii

Query: 1 HFGAGGNQ 8
HFG GN+
Sbjct: 84 HFGFAGNK 91


>sp|Y1633_METJA|UNCHARACTERIZED protein MJ1633|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FGAGGNQ 8
FG GG+Q
Sbjct: 428 FGGGGHQ 434


>sp|PRIS_METST|DNA primase small subunit PriS|Methanosphaera stadtmanae (strain ATCC

Query: 1 HFGAGGNQR 9
H+G G N R
Sbjct: 43 HYGNGPNDR 51


>sp|AGL5_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl5|Haloferax volcanii

Query: 1 HFGAGGNQRI 10
H GAGG R+
Sbjct: 130 HGGAGGVLRV 139


>sp|SYFB_METTP|PHENYLALANINE--TRNA ligase beta subunit|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 HFGAGGNQR 9
H+G G N+R
Sbjct: 124 HWGLGRNRR 132




105|Sequence|521|530|GNQRIRFTLP

>sp|ILVD_PICTO|DIHYDROXY-ACID dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 1 GNQRIRFTLP 10
GN+ +R++LP
Sbjct: 83 GNEGMRYSLP 92


>sp|OGT_METJA|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GNQRIRFTLP 10
GNQ +R T+P
Sbjct: 16 GNQLVRNTIP 25


>sp|Y1865_METTH|UPF0288 protein MTH_1865|Methanothermobacter thermautotrophicus (strain

Query: 2 NQRIRFTLP 10
N RIR+T P
Sbjct: 94 NMRIRWTTP 102


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GNQRIRFTLP 10
GN+ I+ T+P
Sbjct: 469 GNKTIKITVP 478


>sp|ASSY_PYRFU|ARGININOSUCCINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GNQRIRFTL 9
GN ++RF L
Sbjct: 119 GNDQVRFNL 127


>sp|Y1317_ARCFU|UNCHARACTERIZED protein AF_1317|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NQRIRFTL 9
NQ IRF L
Sbjct: 35 NQEIRFVL 42


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 1 GNQRIRF 7
GN+RI+F
Sbjct: 725 GNRRIKF 731


>sp|ASSY_THEVO|ARGININOSUCCINATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GNQRIRFTL 9
GN ++RF L
Sbjct: 118 GNDQVRFEL 126


>sp|ASSY_SULTO|ARGININOSUCCINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GNQRIRFTL 9
GN ++RF L
Sbjct: 119 GNDQVRFDL 127


>sp|ASSY_SULAC|ARGININOSUCCINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GNQRIRFTL 9
GN ++RF L
Sbjct: 119 GNDQVRFDL 127


>sp|ASSY_SACS2|ARGININOSUCCINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GNQRIRFTL 9
GN ++RF L
Sbjct: 119 GNDQVRFDL 127


>sp|ASSY_METS5|ARGININOSUCCINATE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 GNQRIRFTL 9
GN ++RF L
Sbjct: 119 GNDQVRFDL 127


>sp|OGT_METVM|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanocaldococcus vulcanius (strain ATCC

Query: 1 GNQRIRFTLP 10
GN+ +R T+P
Sbjct: 16 GNRLVRNTIP 25




106|Sequence|526|535|RFTLPPLVFA

>sp|SODF_PYRAE|SUPEROXIDE dismutase [Fe]|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RFTLPPLVFA 10
R+TLPPL +A
Sbjct: 6 RYTLPPLPYA 15


>sp|CIMA_METMJ|PUTATIVE (R)-citramalate synthase CimA|Methanoculleus marisnigri (strain

Query: 4 LPPLVFA 10
+PPL+FA
Sbjct: 184 IPPLLFA 190


>sp|Y031_METPE|PUTATIVE HTH-type transcriptional regulatory protein|Methanosphaerula

Query: 4 LPPLVFA 10
+PPLV+A
Sbjct: 112 IPPLVYA 118


>sp|Y195_METB6|PUTATIVE HTH-type transcriptional regulatory protein|Methanoregula boonei

Query: 4 LPPLVFA 10
+PPLV+A
Sbjct: 112 IPPLVYA 118


>sp|LMRAC_THELN|LEUCINE/METHIONINE racemase|Thermococcus litoralis (strain ATCC 51850

Query: 2 FTLPPLVFA 10
FTL PL+ A
Sbjct: 82 FTLEPLLLA 90


>sp|Y500_AERPE|UPF0282 protein APE_0500.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 RFTLPP 6
RF+LPP
Sbjct: 39 RFSLPP 44


>sp|Y1526_METAR|PUTATIVE HTH-type transcriptional regulatory protein|Methanocella arvoryzae

Query: 4 LPPLVFA 10
+PPLV+A
Sbjct: 112 VPPLVYA 118


>sp|Y3946_HALS3|PUTATIVE HTH-type transcriptional regulatory protein|Halobacterium salinarum

Query: 4 LPPLVFA 10
+PPLV+A
Sbjct: 112 IPPLVYA 118


>sp|Y2112_HALSA|PUTATIVE HTH-type transcriptional regulatory protein|Halobacterium salinarum

Query: 4 LPPLVFA 10
+PPLV+A
Sbjct: 112 IPPLVYA 118




107|Sequence|531|540|PLVFAAYQLA

>sp|RL3_NANEQ|LARGE ribosomal subunit protein uL3|Nanoarchaeum equitans (strain

Query: 1 PLVFAAYQLA 10
PL FAAY++
Sbjct: 40 PLAFAAYKVG 49


>sp|TIAS_THEPD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermofilum pendens (strain DSM

Query: 1 PLVFAAY 7
PLVFA Y
Sbjct: 199 PLVFATY 205




108|Sequence|536|545|AYQLAFRYKE

>sp|SDO1_AERPE|RIBOSOME maturation protein SDO1 homolog|Aeropyrum pernix (strain ATCC

Query: 3 QLAFRYKE 10
+LAFRYKE
Sbjct: 26 ELAFRYKE 33


>sp|GGR_THEKO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 AYQLAFRYKE 10
Y+L RYKE
Sbjct: 80 GYELEMRYKE 89


>sp|Y376_METTP|UPF0282 protein Mthe_0376|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 YQLAFRYKE 10
Y L +RY E
Sbjct: 199 YMLGYRYSE 207


>sp|COXX_HALWD|PROTOHEME IX farnesyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 YQLAFRYKE 10
Y LA YKE
Sbjct: 372 YNLALAYKE 380


>sp|COXX2_PYRCJ|PROTOHEME IX farnesyltransferase 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 YQLAFRYKE 10
+ LA+RY+E
Sbjct: 175 WSLAYRYRE 183


>sp|GGR_THEGJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 AYQLAFRYKE 10
Y+L RYK+
Sbjct: 80 GYELEMRYKD 89


>sp|COBS_PYRAE|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 YQLAFRY 8
YQLA+R+
Sbjct: 185 YQLAYRH 191


>sp|COXX1_PYRCJ|PROTOHEME IX farnesyltransferase 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 YQLAFRYKE 10
+ LA++YKE
Sbjct: 175 WSLAYKYKE 183




109|Sequence|541|550|FRYKENSKVD

>sp|RNH2_META3|RIBONUCLEASE HII|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 YKENSKV 9
YKENSK+
Sbjct: 123 YKENSKI 129


>sp|LEU1_ARCFU|PROBABLE 2-isopropylmalate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 1 FRYKENSKVD 10
F+ EN+KVD
Sbjct: 154 FKAVENAKVD 163


>sp|Y819_PYRHO|UNCHARACTERIZED methyltransferase PH0819|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 YKENSKV 9
YKEN KV
Sbjct: 152 YKENGKV 158


>sp|Y092_METJA|UNCHARACTERIZED iron-sulfur protein MJ0092|Methanocaldococcus jannaschii (strain

Query: 2 RYKENSKVD 10
R+KE +K+D
Sbjct: 465 RFKEENKID 473


>sp|Y2678_METMA|UNCHARACTERIZED serpin-like protein MM_2675|Methanosarcina mazei (strain ATCC

Query: 1 FRYKENSKV 9
F Y ENSK
Sbjct: 252 FNYGENSKA 260


>sp|MBD_THEAC|MEVALONATE 3,5-bisphosphate decarboxylase|Thermoplasma acidophilum (strain

Query: 2 RYKENSKVD 10
RY++N K D
Sbjct: 111 RYRKNGKTD 119




110|Sequence|546|555|NSKVDDKWEK

>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain ATCC

Query: 2 SKVDDKWEK 10
+++D+K+EK
Sbjct: 364 AEIDEKYEK 372


>sp|BIOW_METM7|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 NSKVDDKWEK 10
NSK+D+ ++K
Sbjct: 226 NSKIDELYDK 235


>sp|BIOW_METM6|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 NSKVDDKWEK 10
NSK+D+ ++K
Sbjct: 226 NSKIDELYDK 235


>sp|BIOW_METM5|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 NSKVDDKWEK 10
NSK+D+ ++K
Sbjct: 226 NSKIDELYDK 235




111|Sequence|551|560|DKWEKKCQKI

>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 WEKKCQKI 10
++KKC+KI
Sbjct: 437 YKKKCEKI 444


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DKWEKKCQKI 10
++W K C+K+
Sbjct: 437 EEWAKNCEKL 446


>sp|MCRX_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KWEKKC 7
KW +KC
Sbjct: 525 KWPRKC 530


>sp|LYSZ_IGNH4|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Ignicoccus hospitalis

Query: 1 DKWEKK 6
D+WE+K
Sbjct: 39 DEWERK 44


>sp|PGK_HALMA|PHOSPHOGLYCERATE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DKWEKKCQKI 10
++WE+ +KI
Sbjct: 250 EQWEENSEKI 259


>sp|ACDD_METJA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanocaldococcus

Query: 2 KWEKKCQK 9
+W KKC K
Sbjct: 155 EWAKKCVK 162


>sp|RS8_THEKO|SMALL ribosomal subunit protein uS8|Thermococcus kodakarensis (strain

Query: 1 DKWEKK 6
+KWEK+
Sbjct: 87 EKWEKR 92


>sp|RS8_PYRHO|SMALL ribosomal subunit protein uS8|Pyrococcus horikoshii (strain ATCC

Query: 1 DKWEKK 6
+KWEK+
Sbjct: 87 EKWEKR 92


>sp|RS8_PYRFU|SMALL ribosomal subunit protein uS8|Pyrococcus furiosus (strain ATCC

Query: 1 DKWEKK 6
+KWEK+
Sbjct: 87 EKWEKR 92


>sp|RS8_NATPD|SMALL ribosomal subunit protein uS8|Natronomonas pharaonis (strain ATCC

Query: 1 DKWEKK 6
+KWEK+
Sbjct: 87 EKWEKR 92


>sp|RS8_HALMA|SMALL ribosomal subunit protein uS8|Haloarcula marismortui (strain ATCC

Query: 1 DKWEKK 6
+KWEK+
Sbjct: 87 EKWEKR 92


>sp|RS8_HALLT|SMALL ribosomal subunit protein uS8|Halorubrum lacusprofundi (strain

Query: 1 DKWEKK 6
+KWEK+
Sbjct: 87 EKWEKR 92


>sp|HIS6_METS3|IMIDAZOLE glycerol phosphate synthase subunit|Methanobrevibacter smithii

Query: 2 KWEKKCQKI 10
+W KCQ++
Sbjct: 178 EWAVKCQEL 186


>sp|ACDD_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit delta|Archaeoglobus fulgidus

Query: 2 KWEKKCQK 9
+W +KC K
Sbjct: 196 EWARKCVK 203


>sp|RS8_THESM|SMALL ribosomal subunit protein uS8|Thermococcus sibiricus (strain DSM

Query: 1 DKWEKK 6
+KWEK+
Sbjct: 87 EKWEKR 92


>sp|PURA_METJA|ADENYLOSUCCINATE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DKWEKKC 7
DK++K+C
Sbjct: 292 DKYDKEC 298


>sp|METAA_METAX|HOMOSERINE O-acetyltransferase|Methanomethylophilus alvi (strain Mx1201)

Query: 1 DKWEKKCQ 8
D W++ CQ
Sbjct: 119 DYWDELCQ 126


>sp|RL31_METAC|LARGE ribosomal subunit protein eL31|Methanosarcina acetivorans (strain

Query: 3 WEKKCQK 9
WEK C+K
Sbjct: 60 WEKGCEK 66




112|Sequence|556|565|KCQKIFSFAH

>sp|LEU3_METJA|3-ISOPROPYLMALATE/3-METHYLMALATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CQKIFSFA 9
C++IF FA
Sbjct: 142 CERIFRFA 149


>sp|AMTAB_METTH|PROBABLE threonylcarbamoyladenosine tRNA

Query: 1 KCQKIFSFAH 10
K +K++SF H
Sbjct: 245 KSEKVYSFLH 254


>sp|PGP_METMA|PHOSPHOGLYCOLATE phosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KCQKIFSF 8
+C+K FSF
Sbjct: 84 ECEKAFSF 91


>sp|PGP_METAC|PHOSPHOGLYCOLATE phosphatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KCQKIFSF 8
+C+K FSF
Sbjct: 84 ECEKAFSF 91


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 CQKIFSFA 9
C KIFS A
Sbjct: 668 CNKIFSSA 675


>sp|DPHB_THEGJ|DIPHTHINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KCQKIFS 7
KC KIF+
Sbjct: 26 KCDKIFA 32


>sp|GLYA_METTP|SERINE hydroxymethyltransferase|Methanothrix thermoacetophila (strain

Query: 1 KCQKIFSFAH 10
+C+K+F H
Sbjct: 77 RCKKLFGAEH 86




113|Sequence|561|570|FSFAHQTISA

>sp|Y677_METTH|UNCHARACTERIZED protein MTH_677|Methanothermobacter thermautotrophicus (strain

Query: 2 SFAHQTIS 9
SF H TIS
Sbjct: 16 SFLHNTIS 23




114|Sequence|566|575|QTISALIKAE

***** No hits found ******


115|Sequence|571|580|LIKAELAELP

>sp|Y2307_ARCFU|UNCHARACTERIZED protein AF_2307|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LIKAELAELP 10
+++AEL ELP
Sbjct: 268 ILRAELEELP 277


>sp|RFCS1_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 IKAELAEL 9
IKAE+AEL
Sbjct: 280 IKAEIAEL 287


>sp|PRNK_PYRFU|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PF0112|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LIKAELAELP 10
++KA++AE+P
Sbjct: 262 VVKADVAEVP 271


>sp|RS17E_PYRAR|SMALL ribosomal subunit protein eS17|Pyrobaculum arsenaticum (strain

Query: 4 AELAELP 10
AELAE+P
Sbjct: 36 AELAEIP 42


>sp|RFCS1_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 IKAELAEL 9
+KAE+AEL
Sbjct: 280 VKAEIAEL 287


>sp|GATE_THEGJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus gammatolerans (strain DSM

Query: 2 IKAELAELP 10
IKA L ELP
Sbjct: 448 IKANLPELP 456


>sp|AATC_PYRHO|A-TYPE ATP synthase subunit C|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LIKAELAELP 10
+IKA+L+ LP
Sbjct: 133 VIKAKLSNLP 142




116|Sequence|576|585|LAELPLRLFL

>sp|ADEC_STAMF|ADENINE deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 1 LAELPLRL 8
+ ELPLRL
Sbjct: 528 IGELPLRL 535


>sp|SYP_METTP|PROLINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 AELPLRLF 9
A+LPLR++
Sbjct: 131 ADLPLRIY 138


>sp|AATI_METMA|A-TYPE ATP synthase subunit I|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 AELPLRL 8
AELPLR+
Sbjct: 260 AELPLRI 266


>sp|SODF_ACIAM|SUPEROXIDE dismutase [Fe]|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 LAELPLRLFL 10
+AELP+ L L
Sbjct: 161 IAELPILLIL 170


>sp|DNLI_HYPBU|DNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 LAELPLRLFL 10
L+E+P+ +FL
Sbjct: 348 LSEIPVAVFL 357


>sp|NTPTH_METS5|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Metallosphaera sedula (strain ATCC 51363

Query: 3 ELPLRLFL 10
E PLRLF+
Sbjct: 9 ENPLRLFI 16




117|Sequence|581|590|LRLFLQGALA

>sp|GATE_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanopyrus kandleri (strain AV19 /

Query: 1 LRLFLQGALA 10
LRL+ +GA+A
Sbjct: 538 LRLYAEGAIA 547




118|Sequence|586|595|QGALAAGEIG

>sp|MCRB_METBF|METHYL-COENZYME M reductase subunit beta|Methanosarcina barkeri (strain Fusaro /

Query: 1 QGALAAGEIG 10
QGALA+G++G
Sbjct: 51 QGALASGKMG 60


>sp|CBIM_HALS3|PUTATIVE cobalt transport protein CbiM|Halobacterium salinarum (strain ATCC

Query: 1 QGALAAGEIG 10
+GALAAG IG
Sbjct: 194 EGALAAGLIG 203


>sp|DGGGP_THEKO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QGALAAGEIG 10
GA+A GEIG
Sbjct: 145 YGAIAVGEIG 154


>sp|HACA_METJA|METHANOGEN homoaconitase large subunit|Methanocaldococcus jannaschii (strain

Query: 1 QGALAAGEI 9
QG LA GEI
Sbjct: 370 QGVLAEGEI 378


>sp|HMDH_METJA|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GALAAGEIG 10
GALAAG +G
Sbjct: 389 GALAAGHLG 397


>sp|TIAS_IGNH4|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignicoccus hospitalis (strain

Query: 1 QGALAAGE 8
+GALA GE
Sbjct: 82 RGALAVGE 89


>sp|DNAK_PICTO|CHAPERONE protein DnaK|Picrophilus torridus (strain ATCC 700027

Query: 1 QGALAAGEI 9
QGA+ AGE+
Sbjct: 354 QGAVLAGEV 362




119|Sequence|591|600|AGEIGFENHE

>sp|BPSA_THEKO|N(4)-BIS(AMINOPROPYL)SPERMIDINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 AGEIGFENHE 10
A EIG+EN E
Sbjct: 192 ADEIGYENIE 201


>sp|APE2_SACS2|LEUCYL aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 AGEIGFENHE 10
AG+IGF+ +E
Sbjct: 531 AGKIGFKEYE 540


>sp|SOR_ACIAM|SULFUR oxygenase/reductase|Acidianus ambivalens (Desulfurolobus

Query: 2 GEIGFENH 9
G +GF+NH
Sbjct: 39 GFVGFQNH 46


>sp|MUTL_METTP|DNA mismatch repair protein MutL|Methanothrix thermoacetophila (strain

Query: 2 GEIGFE 7
GEIGFE
Sbjct: 445 GEIGFE 450


>sp|HELS_SULAC|ATP-DEPENDENT DNA helicase Hel308|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 AGEIGFENH 9
AG G++NH
Sbjct: 386 AGRPGYDNH 394


>sp|AGL7_HALVD|LOW-SALT glycan biosynthesis sulfotransferase Agl7|Haloferax volcanii

Query: 1 AGEIGFEN 8
+GE GFEN
Sbjct: 10 SGESGFEN 17


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 IGFENHE 10
IGF NH+
Sbjct: 33 IGFHNHK 39


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 EIGFENHE 10
E+GFEN +
Sbjct: 98 ELGFENKK 105


>sp|ASSY_METBU|ARGININOSUCCINATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 EIGFEN 8
EIGFEN
Sbjct: 215 EIGFEN 220


>sp|GLNB2_METMP|NITROGEN fixation nifHD region glnB-like|Methanococcus maripaludis (strain

Query: 2 GEIGFE 7
GE+GFE
Sbjct: 44 GELGFE 49


>sp|GLNB2_METMI|NITROGEN fixation nifHD region glnB-like|Methanococcus maripaludis

Query: 2 GEIGFE 7
GE+GFE
Sbjct: 44 GELGFE 49




120|Sequence|596|605|FENHETVAYE

>sp|GPN_PYRAB|GPN-LOOP GTPase PAB0955|Pyrococcus abyssi (strain GE5 /

Query: 1 FENHETVAYE 10
FE+ ET+AYE
Sbjct: 230 FEDLETLAYE 239


>sp|CHEF2_HALS3|TAXIS protein CheF2|Halobacterium salinarum (strain ATCC 29341

Query: 1 FENHETVAYE 10
FE+ T+AYE
Sbjct: 67 FEDTVTIAYE 76


>sp|ADEC_METBF|ADENINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 3 NHETVAYE 10
+HE+ AYE
Sbjct: 195 DHESFAYE 202


>sp|Y2097_ARCFU|PUTATIVE nickel insertion protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FENHETVAYE 10
FEN +T YE
Sbjct: 133 FENLKTAGYE 142




121|Sequence|601|610|TVAYEFMSQA

>sp|RFCL_HALWD|REPLICATION factor C large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 3 AYEFMSQA 10
AYEF+S A
Sbjct: 282 AYEFLSNA 289


>sp|RFCL_HALSA|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 700922

Query: 3 AYEFMSQA 10
AYEF+S A
Sbjct: 278 AYEFLSNA 285


>sp|RFCL_HALS3|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 29341

Query: 3 AYEFMSQA 10
AYEF+S A
Sbjct: 278 AYEFLSNA 285


>sp|RFCL_HALMA|REPLICATION factor C large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 3 AYEFMSQA 10
AYEF+S A
Sbjct: 277 AYEFLSNA 284




122|Sequence|606|615|FMSQAFSLYE

***** No hits found ******


123|Sequence|611|620|FSLYEDEISD

>sp|AATA_METAR|A-TYPE ATP synthase subunit A|Methanocella arvoryzae (strain DSM 22066

Query: 1 FSLYEDEISD 10
+SLY+D + D
Sbjct: 429 YSLYQDSLKD 438


>sp|AATA_METBF|A-TYPE ATP synthase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 1 FSLYEDEISD 10
+SLY+D ++D
Sbjct: 428 YSLYKDSLND 437


>sp|AATA_METBA|A-TYPE ATP synthase subunit A|Methanosarcina barkeri

Query: 1 FSLYEDEISD 10
+SLY+D ++D
Sbjct: 428 YSLYKDSLND 437


>sp|AATA_META3|A-TYPE ATP synthase subunit A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 FSLYEDEISD 10
+SLY D+I D
Sbjct: 435 YSLYLDDIED 444


>sp|AATA_THESM|A-TYPE ATP synthase subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 1 FSLYEDEISD 10
+SLY D I D
Sbjct: 433 YSLYVDSIKD 442


>sp|AATA_STAMF|A-TYPE ATP synthase subunit A|Staphylothermus marinus (strain ATCC 43588

Query: 1 FSLYEDEISD 10
+SLY D ++D
Sbjct: 433 YSLYVDNVTD 442


>sp|AATA_THESI|A-TYPE ATP synthase subunit A|Thermococcus sp. (strain KI)

Query: 1 FSLYEDEISD 10
+SLY D I D
Sbjct: 433 YSLYVDAIQD 442


>sp|GGGPS_CENSY|GERANYLGERANYLGLYCERYL phosphate synthase|Cenarchaeum symbiosum (strain A)

Query: 1 FSLYEDEISD 10
F+L + E+SD
Sbjct: 20 FALIDSEVSD 29


>sp|KAD6_SULTO|PUTATIVE adenylate kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FSLYEDEISD 10
S YED ISD
Sbjct: 178 ISSYEDSISD 187


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FSLYEDEISD 10
+SLY D + D
Sbjct: 861 YSLYVDAVQD 870


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FSLYEDEISD 10
+SLY D + D
Sbjct: 812 YSLYVDAVKD 821


>sp|HIS6_SACS2|IMIDAZOLE glycerol phosphate synthase subunit|Saccharolobus solfataricus

Query: 2 SLYEDEISD 10
SLYE+E +D
Sbjct: 37 SLYEEEGAD 45


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 1 FSLYEDEISD 10
+SLY D + D
Sbjct: 865 YSLYVDAVKD 874




124|Sequence|616|625|DEISDSKAQL

>sp|Y1283_ARCFU|UNCHARACTERIZED protein AF_1283|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DEISDSKAQL 10
D +SD++AQL
Sbjct: 31 DVVSDAQAQL 40




125|Sequence|621|630|SKAQLAAITL

***** No hits found ******


126|Sequence|626|635|AAITLIIGTF

>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AAITLIIGTF 10
AA+TL +G F
Sbjct: 594 AAVTLAVGDF 603


>sp|MTRD_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina mazei (strain ATCC

Query: 2 AITLIIGTF 10
A+T+I+GT+
Sbjct: 89 AVTMIVGTW 97


>sp|MTRD_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanopyrus kandleri (strain AV19

Query: 2 AITLIIGTF 10
AIT+++G F
Sbjct: 83 AITMLVGNF 91




127|Sequence|631|640|IIGTFERMKC

>sp|COFD_METMA|2-PHOSPHO-L-LACTATE transferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GTFERMK 9
GT+ERMK
Sbjct: 72 GTYERMK 78


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IGTFER 7
IGTFER
Sbjct: 343 IGTFER 348


>sp|MCRY_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 2 IGTFERM 8
+G FERM
Sbjct: 230 VGAFERM 236


>sp|MCRY_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 2 IGTFERM 8
+G FERM
Sbjct: 230 VGAFERM 236


>sp|MCRB_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 2 IGTFERM 8
+G FERM
Sbjct: 230 VGAFERM 236


>sp|MCRB_METTH|METHYL-COENZYME M reductase I subunit|Methanothermobacter thermautotrophicus

Query: 2 IGTFERM 8
+G FERM
Sbjct: 230 VGAFERM 236


>sp|ARAD_SACS2|ARABINONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GTFERMKC 10
G FE KC
Sbjct: 364 GVFEEYKC 371




128|Sequence|636|645|ERMKCFSEEN

>sp|SYT_METB6|THREONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 ERMKCFSEE 9
E MKCF E+
Sbjct: 350 EAMKCFEEQ 358


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 ERMKCFSEE 9
ER CF+EE
Sbjct: 502 ERHICFAEE 510


>sp|TYW2_METJA|TRNA(PHE) (4-demethylwyosine(37)-C(7))

Query: 1 ERMKCFSEEN 10
ER+K ++E+N
Sbjct: 209 ERLKFYAEKN 218


>sp|RNZ_THEKO|RIBONUCLEASE Z|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ERMKCFSE 8
ER+K FSE
Sbjct: 212 ERVKLFSE 219


>sp|SAND_THEX5|S-ADENOSYLMETHIONINE-DEPENDENT nucleotide dehydratase|Thermoplasmatales archaeon (strain ISO4-H5)

Query: 1 ERMKCF 6
ER+KCF
Sbjct: 175 ERVKCF 180


>sp|RNZ_THESM|RIBONUCLEASE Z|Thermococcus sibiricus (strain DSM 12597

Query: 1 ERMKCFSE 8
ER+K FSE
Sbjct: 212 ERIKLFSE 219


>sp|RIBL_METP4|FAD synthase|Methanolacinia petrolearia (strain DSM 11571

Query: 1 ERMKCFSEEN 10
E++KC EEN
Sbjct: 98 EKLKCDLEEN 107


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 1 ERMKCFSE 8
E +KC+SE
Sbjct: 354 EGLKCYSE 361




129|Sequence|641|650|FSEENHEPLR

>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 FSEENHEPLR 10
F+E HEP+R
Sbjct: 67 FAERGHEPIR 76


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FSEENHEPLR 10
F E HEP++
Sbjct: 70 FKEHGHEPIK 79


>sp|Y1996_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 FSEENHEPL 9
+S EN+EPL
Sbjct: 304 WSSENNEPL 312


>sp|IF6_ARCFU|TRANSLATION initiation factor 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 NHEPL 9
NHEPL
Sbjct: 27 NHEPL 31


>sp|TSR3_HALSA|16S rRNA aminocarboxypropyltransferase|Halobacterium salinarum (strain

Query: 1 FSEENHEPLR 10
F E N EPLR
Sbjct: 132 FLELNEEPLR 141


>sp|TSR3_HALS3|16S rRNA aminocarboxypropyltransferase|Halobacterium salinarum (strain

Query: 1 FSEENHEPLR 10
F E N EPLR
Sbjct: 132 FLELNEEPLR 141


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 FSEENHEPLR 10
F+E+ H P++
Sbjct: 72 FAEKGHSPVK 81


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 FSEENHEPLR 10
F+E+ H P++
Sbjct: 72 FAEKGHSPVK 81


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 FSEENHEPLR 10
F+E+ H P++
Sbjct: 72 FAEKGHSPVK 81


>sp|DP2S_THEAC|DNA polymerase II small subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 EENHEPL 9
EE HEP+
Sbjct: 225 EEKHEPV 231




130|Sequence|646|655|HEPLRTQCAL

>sp|RFCS_THEKO|REPLICATION factor C small subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 EPLRTQCAL 10
EP++++CA+
Sbjct: 695 EPIQSRCAI 703


>sp|RFCS_PYRHO|REPLICATION factor C small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EPLRTQCAL 10
EP++++CA+
Sbjct: 682 EPIQSRCAI 690


>sp|RFCS_PYRFU|REPLICATION factor C small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EPLRTQCAL 10
EP++++CA+
Sbjct: 680 EPIQSRCAI 688


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 EPLRTQCAL 10
EP++++CA+
Sbjct: 1264 EPIQSRCAI 1272


>sp|RFCS_THEPD|REPLICATION factor C small subunit|Thermofilum pendens (strain DSM 2475

Query: 2 EPLRTQCAL 10
EP++++CA+
Sbjct: 146 EPIQSRCAV 154


>sp|RFCS_METMA|REPLICATION factor C small subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EPLRTQCAL 10
EP++++CA+
Sbjct: 156 EPIQSRCAV 164


>sp|RFCS_METBF|REPLICATION factor C small subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 EPLRTQCAL 10
EP++++CA+
Sbjct: 152 EPIQSRCAV 160


>sp|RFCS_METAR|REPLICATION factor C small subunit|Methanocella arvoryzae (strain DSM 22066

Query: 2 EPLRTQCAL 10
EP++++CA+
Sbjct: 147 EPIQSRCAV 155


>sp|RFCS_METAC|REPLICATION factor C small subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 EPLRTQCAL 10
EP++++CA+
Sbjct: 156 EPIQSRCAV 164


>sp|RFCS_ARCFU|REPLICATION factor C small subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EPLRTQCAL 10
EP++++CA+
Sbjct: 147 EPIQSRCAV 155


>sp|RFCS_STAMF|REPLICATION factor C small subunit|Staphylothermus marinus (strain ATCC 43588

Query: 2 EPLRTQCAL 10
EP++++CA+
Sbjct: 153 EPIQSRCAV 161


>sp|RS2_THEPD|SMALL ribosomal subunit protein uS2|Thermofilum pendens (strain DSM

Query: 1 HEPLRTQCAL 10
H P+R C L
Sbjct: 85 HRPVRKFCGL 94


>sp|Y703_ARCFU|UNCHARACTERIZED protein AF_0703|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HEPLRTQ 7
H PLRT+
Sbjct: 36 HSPLRTR 42




131|Sequence|651|660|TQCALAASKL

>sp|RFCS_METST|REPLICATION factor C small subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 TQCALAASK 9
T CALA +K
Sbjct: 50 TTCALALAK 58




132|Sequence|656|665|AASKLLKKPD

>sp|Y1255_METJA|UNCHARACTERIZED glycosyltransferase MJ1255|Methanocaldococcus jannaschii (strain

Query: 2 ASKLLKKP 9
A+KLLKKP
Sbjct: 109 AAKLLKKP 116




133|Sequence|661|670|LKKPDQGRAV

>sp|MPTA_METST|GTP cyclohydrolase MptA|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LKKPDQGRAV 10
LK+PD+ R V
Sbjct: 238 LKRPDENRIV 247


>sp|RF1_THEVO|PEPTIDE chain release factor subunit|Thermoplasma volcanium (strain ATCC

Query: 1 LKKPDQGRAV 10
+KKPD G AV
Sbjct: 291 VKKPDGGLAV 300


>sp|Y3016_METHJ|DNA-BINDING protein Mhun_3016|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LKKPDQGRAV 10
L KPD RAV
Sbjct: 59 LTKPDFARAV 68


>sp|RS28_METKA|SMALL ribosomal subunit protein eS28|Methanopyrus kandleri (strain AV19

Query: 1 LKKPDQGRAV 10
L+ PD+GR +
Sbjct: 38 LEGPDKGRII 47


>sp|WTPC_METJA|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Methanocaldococcus jannaschii

Query: 3 KPDQGRAV 10
KPD GR +
Sbjct: 50 KPDSGRII 57


>sp|NUCS_AERPE|ENDONUCLEASE NucS|Aeropyrum pernix (strain ATCC 700893

Query: 1 LKKPDQGRAV 10
L KP +GR+V
Sbjct: 248 LLKPGRGRSV 257




134|Sequence|666|675|QGRAVSTCAH

>sp|TRPD_METPE|ANTHRANILATE phosphoribosyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 QGRAVSTC 8
QGR V TC
Sbjct: 74 QGRLVDTC 81


>sp|CIMA_METAC|PUTATIVE (R)-citramalate synthase CimA|Methanosarcina acetivorans (strain

Query: 3 RAVSTCA 9
RAVS+CA
Sbjct: 415 RAVSSCA 421


>sp|CIMA_METMA|PUTATIVE (R)-citramalate synthase CimA|Methanosarcina mazei (strain ATCC

Query: 3 RAVSTCA 9
RAVS+CA
Sbjct: 415 RAVSSCA 421




135|Sequence|671|680|STCAHLFWSG

>sp|HIS7_METS5|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 4 AHLFWS 9
AH FWS
Sbjct: 136 AHFFWS 141


>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 TCAHLFWS 9
TC + FW+
Sbjct: 23 TCGNFFWT 30


>sp|CAS1_KORCO|CRISPR-ASSOCIATED endonuclease Cas1|Korarchaeum cryptofilum (strain OPF8)

Query: 1 STCAHLFW 8
S CA+++W
Sbjct: 174 SKCANIYW 181


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 STCAHLFWS 9
S+C FW+
Sbjct: 22 SSCGKAFWT 30


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 STCAHLFWS 9
S C+ FW+
Sbjct: 19 SVCSSYFWT 27


>sp|Y1506_METJA|UNCHARACTERIZED protein MJ1506|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 STCAHLFWSG 10
S A+LFW G
Sbjct: 267 SINANLFWVG 276


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 STCAHLFWS 9
S C FW+
Sbjct: 34 SVCGRYFWA 42


>sp|FLUC_METKA|FLUORIDE-SPECIFIC ion channel FluC|Methanopyrus kandleri (strain AV19 /

Query: 3 CAHLFWSG 10
AH+ WSG
Sbjct: 122 AAHVVWSG 129


>sp|CIMA_METMJ|PUTATIVE (R)-citramalate synthase CimA|Methanoculleus marisnigri (strain

Query: 1 STCAHLFWSG 10
+TCAH+ +G
Sbjct: 215 ATCAHVTVNG 224




136|Sequence|676|685|LFWSGRNTDK

>sp|SYR_METPE|ARGININE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 WSGRNTDK 10
W GRN D+
Sbjct: 317 WKGRNFDR 324


>sp|SYW2_HALSA|TRYPTOPHAN--TRNA ligase 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 LFWSGRNTD 9
LF++GR+ D
Sbjct: 50 LFYAGRDVD 58


>sp|THYX_HALSA|FLAVIN-DEPENDENT thymidylate synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 WSGRNTD 9
W GRN D
Sbjct: 129 WVGRNQD 135


>sp|DNAG_PICTO|DNA primase DnaG|Picrophilus torridus (strain ATCC 700027

Query: 3 WSGRNTDK 10
WS RNT +
Sbjct: 284 WSSRNTKE 291


>sp|VHOC_METMA|F420 non-reducing hydrogenase I cytochrome|Methanosarcina mazei (strain

Query: 1 LFWSGR 6
+FWSG+
Sbjct: 228 IFWSGK 233


>sp|VHTC_METMA|F420 non-reducing hydrogenase II cytochrome|Methanosarcina mazei (strain

Query: 1 LFWSGR 6
+FWSG+
Sbjct: 228 IFWSGK 233


>sp|AROE_AERPE|SHIKIMATE dehydrogenase (NADP(+))|Aeropyrum pernix (strain ATCC 700893

Query: 3 WSGRNTD 9
W G NTD
Sbjct: 93 WEGFNTD 99


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 FWSGRNT 8
+W G NT
Sbjct: 276 YWCGENT 282




137|Sequence|681|690|RNTDKNGEEL

>sp|MOAA_THEAC|PROBABLE GTP 3',8-cyclase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 TDKNGEEL 10
TD NGEEL
Sbjct: 34 TDVNGEEL 41


>sp|NPPNK_METMP|BIFUNCTIONAL NADP phosphatase/NAD kinase|Methanococcus maripaludis (strain DSM

Query: 3 TDKNGEEL 10
TDKNG+E+
Sbjct: 245 TDKNGQEV 252


>sp|BSUHB_METJA|FRUCTOSE-1,6-BISPHOSPHATASE/INOSITOL-1-MONOPHOSPHATASE jannaschii (strain ATCC 43067

Query: 3 TDKNGEEL 10
TD+NG+EL
Sbjct: 217 TDENGDEL 224


>sp|PRNK_METJA|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase MJ1315|Methanocaldococcus jannaschii (strain

Query: 3 TDKNGEEL 10
D+NGEEL
Sbjct: 346 VDENGEEL 353


>sp|TRM1_NATPD|TRNA (guanine(26)-N(2))-dimethyltransferase|Natronomonas pharaonis

Query: 1 RNTDKNG 7
RN D+NG
Sbjct: 90 RNLDRNG 96


>sp|Y1411_THEKO|UPF0292 protein TK1411|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 NTDKNGEEL 10
+ DK GEEL
Sbjct: 69 DFDKKGEEL 77


>sp|SYP_METB6|PROLINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 4 DKNGEE 9
DKNGE+
Sbjct: 247 DKNGEQ 252


>sp|COFE_METMP|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 RNTDKNGEEL 10
+N DK+ EE+
Sbjct: 128 KNPDKSAEEI 137




138|Sequence|686|695|NGEELHGGKR

>sp|NPD_CALMQ|NAD-DEPENDENT protein deacetylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 NGEELHGGKR 10
NGE L GG++
Sbjct: 3 NGECLEGGRK 12


>sp|PURO_METJA|IMP cyclohydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GEELHGGKR 10
E+LH GKR
Sbjct: 81 AEKLHFGKR 89


>sp|THIL_METJA|THIAMINE-MONOPHOSPHATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NGEELHGG 8
+GEE +GG
Sbjct: 306 DGEEFYGG 313


>sp|Y534_METJA|UNCHARACTERIZED protein MJ0534|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NGEELHGGKR 10
NG+EL+ G R
Sbjct: 126 NGDELNIGNR 135


>sp|GGGPS_STAMF|GERANYLGERANYLGLYCERYL phosphate synthase|Staphylothermus marinus (strain ATCC 43588

Query: 1 NGEELH 6
NGE+LH
Sbjct: 14 NGEKLH 19


>sp|DHYS_PYRCJ|PROBABLE deoxyhypusine synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 EELHGGKR 10
E +HGGKR
Sbjct: 206 EIVHGGKR 213


>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 2 GEELHGGK 9
GE+L GG+
Sbjct: 594 GEKLEGGR 601




139|Sequence|691|700|HGGKRVMECL

>sp|DPHB_PYRNV|DIPHTHINE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 GKRVMECL 10
G+RV+ECL
Sbjct: 63 GRRVLECL 70


>sp|DPHB_PYRAE|DIPHTHINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 HGGKRVMECL 10
H G+++ ECL
Sbjct: 61 HSGRKIFECL 70


>sp|IDSA_METTM|SHORT chain isoprenyl diphosphate synthase|Methanothermobacter

Query: 4 KRVMECL 10
KR+MEC+
Sbjct: 17 KRIMECI 23


>sp|RIFK_METMJ|RIBOFLAVIN kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GGKRVMECL 10
GG RV+ CL
Sbjct: 166 GGARVLPCL 174


>sp|Y1342_METJA|UNCHARACTERIZED protein MJ1342|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GGKRVMECL 10
GGK++ +CL
Sbjct: 6 GGKKIAKCL 14


>sp|ARFB_METTH|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanothermobacter thermautotrophicus

Query: 1 HGGKRVMECL 10
HGG ++ +C+
Sbjct: 111 HGGNKLEDCM 120


>sp|COFF_METMP|COENZYME gamma-F420-2:alpha-L-glutamate ligase|Methanococcus maripaludis

Query: 4 KRVMECL 10
KR+ ECL
Sbjct: 273 KRIAECL 279


>sp|Y3680_PYRAE|UPF0282 protein PAE3680|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 HGGKRVM 7
+GGKRV+
Sbjct: 99 YGGKRVL 105


>sp|Y934_PYRNV|UPF0282 protein Tneu_0934|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 HGGKRVM 7
+GGKRV+
Sbjct: 99 YGGKRVL 105


>sp|RFCL_METB6|REPLICATION factor C large subunit|Methanoregula boonei (strain DSM 21154

Query: 2 GGKRVMECL 10
G K ++EC+
Sbjct: 115 GAKAILECI 123


>sp|Y1332_METJA|UNCHARACTERIZED GTP-binding protein MJ1332|Methanocaldococcus jannaschii (strain

Query: 1 HGGKRVMECL 10
+GG V EC+
Sbjct: 296 YGGTGVQECI 305


>sp|DHYS_PYRCJ|PROBABLE deoxyhypusine synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 HGGKRV 6
HGGKR+
Sbjct: 209 HGGKRL 214


>sp|PRIS_HALWD|DNA primase small subunit PriS|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GGKRVMECL 10
G K V ECL
Sbjct: 362 GNKTVEECL 370


>sp|ARFB_METTM|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanothermobacter marburgensis

Query: 1 HGGKRVMECL 10
HGG ++ +C+
Sbjct: 110 HGGNQLEDCV 119




140|Sequence|696|705|VMECLKKALK

>sp|GLNK3_ARCFU|NITROGEN regulatory protein GlnK3|Archaeoglobus fulgidus (strain ATCC

Query: 2 MECLKKALK 10
+EC+KKAL+
Sbjct: 24 LECVKKALE 32


>sp|GLNK1_ARCFU|NITROGEN regulatory protein GlnK1|Archaeoglobus fulgidus (strain ATCC

Query: 2 MECLKKALK 10
+EC+KKAL+
Sbjct: 24 LECVKKALE 32


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 VMECLKKALK 10
++E LKKALK
Sbjct: 245 MLEILKKALK 254


>sp|COPP_THEVO|BIFUNCTIONAL phosphopantetheine adenylyltransferase/NTP phosphatase|Thermoplasma

Query: 1 VMECLKKAL 9
+MEC++ A
Sbjct: 304 IMECIRNAF 312


>sp|THII_PYRAE|TRNA sulfurtransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 MECLKKAL 9
+ CLKKAL
Sbjct: 55 VNCLKKAL 62


>sp|SYFB_META3|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VMECLKKA 8
++ CLKKA
Sbjct: 299 IIACLKKA 306


>sp|CDC62_METMA|ORC1-TYPE DNA replication protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VMECLKKA 8
++ CLKKA
Sbjct: 366 ILNCLKKA 373


>sp|GATE_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Archaeoglobus fulgidus (strain ATCC

Query: 1 VMECLKKALK 10
V E LKKALK
Sbjct: 599 VAEKLKKALK 608


>sp|RPO1C_META3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus aeolicus (strain ATCC

Query: 1 VMECLKKALK 10
VME +KK +K
Sbjct: 174 VMEAIKKKMK 183




141|Sequence|701|710|KKALKIANQC

>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro

Query: 1 KKALKIAN 8
KKA++IAN
Sbjct: 22 KKAIEIAN 29


>sp|Y738_METJA|UNCHARACTERIZED protein MJ0738|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ALKIANQC 10
A+K+AN+C
Sbjct: 79 AMKLANKC 86


>sp|RFCS_PYRHO|REPLICATION factor C small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KKALKIAN 8
KKALK+ N
Sbjct: 245 KKALKLVN 252


>sp|Y2172_ARCFU|UNCHARACTERIZED protein AF_2172|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KALKIAN 8
KA+KIAN
Sbjct: 44 KAIKIAN 50


>sp|Y1653_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 1 KKALKIANQ 9
KKALK+A +
Sbjct: 244 KKALKLAEE 252


>sp|TRUD_METM5|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain C5

Query: 1 KKALKIANQ 9
KKALK+ N+
Sbjct: 226 KKALKLFNR 234


>sp|TRUD2_METMP|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain DSM

Query: 1 KKALKIANQ 9
KKALK+ N+
Sbjct: 226 KKALKLFNR 234




142|Sequence|706|715|IANQCMDPSL

>sp|DCUP_PICTO|UROPORPHYRINOGEN decarboxylase|Picrophilus torridus (strain ATCC 700027

Query: 1 IANQCMDPSL 10
I CMDP L
Sbjct: 40 IKEICMDPEL 49


>sp|ENO_SACI7|ENOLASE islandicus (strain Y.G.57.14 /

Query: 1 IANQCMDPSL 10
IAN +DP+L
Sbjct: 68 IANYIIDPAL 77


>sp|ENO_SACI6|ENOLASE islandicus (strain M.16.4 /

Query: 1 IANQCMDPSL 10
IAN +DP+L
Sbjct: 68 IANYIIDPAL 77


>sp|ENO_SACI4|ENOLASE islandicus (strain M.14.25 /

Query: 1 IANQCMDPSL 10
IAN +DP+L
Sbjct: 68 IANYIIDPAL 77


>sp|ENO_SACI3|ENOLASE islandicus (strain M.16.27) (Sulfolobus

Query: 1 IANQCMDPSL 10
IAN +DP+L
Sbjct: 68 IANYIIDPAL 77


>sp|ENO_SACI2|ENOLASE islandicus (strain L.S.2.15 /

Query: 1 IANQCMDPSL 10
IAN +DP+L
Sbjct: 68 IANYIIDPAL 77


>sp|ENO_SACI1|ENOLASE islandicus (strain Y.N.15.51 /

Query: 1 IANQCMDPSL 10
IAN +DP+L
Sbjct: 68 IANYIIDPAL 77


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 3 NQCMDPSL 10
N C+DP++
Sbjct: 361 NTCVDPNV 368




143|Sequence|711|720|MDPSLQVQLF

>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 1 MDPSLQVQLF 10
+DP +Q +LF
Sbjct: 244 LDPEIQNELF 253


>sp|ASSY_THEAC|ARGININOSUCCINATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MDPSLQV 7
+DPS+QV
Sbjct: 131 LDPSMQV 137


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 1 MDPSLQVQLF 10
+DP +Q +LF
Sbjct: 244 LDPEVQNELF 253


>sp|DCD_NATPD|DCTP deaminase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DPSLQVQ 8
DP LQVQ
Sbjct: 24 DPELQVQ 30


>sp|EF2_THEVO|ELONGATION factor 2|Thermoplasma volcanium (strain ATCC 51530

Query: 2 DPSLQVQL 9
DPS+QV +
Sbjct: 417 DPSIQVDI 424


>sp|EF2_THEAC|ELONGATION factor 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DPSLQVQL 9
DPS+QV +
Sbjct: 417 DPSIQVDI 424


>sp|EF2_PICTO|ELONGATION factor 2|Picrophilus torridus (strain ATCC 700027

Query: 2 DPSLQVQL 9
DPS+QV +
Sbjct: 417 DPSIQVDI 424




144|Sequence|716|725|QVQLFIEILN

***** No hits found ******


145|Sequence|721|730|IEILNRYIYF

>sp|PTAS_METTE|PHOSPHATE acetyltransferase|Methanosarcina thermophila

Query: 2 EILNRYIYF 10
EI++ Y+YF
Sbjct: 99 EIMSDYVYF 107


>sp|THIC_METB6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 IEILNRYIYF 10
I+I+NRY F
Sbjct: 416 IKIVNRYFKF 425


>sp|MDH_NATPD|MALATE dehydrogenase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IEILNRYIY 9
+++LNR++Y
Sbjct: 123 VDLLNRHLY 131


>sp|MDH_HALVD|MALATE dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 1 IEILNRYIY 9
+++LNR++Y
Sbjct: 123 VDLLNRHLY 131


>sp|MDH_HALSA|MALATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 1 IEILNRYIY 9
+++LNR++Y
Sbjct: 123 VDLLNRHLY 131


>sp|MDH_HALS3|MALATE dehydrogenase|Halobacterium salinarum (strain ATCC 29341

Query: 1 IEILNRYIY 9
+++LNR++Y
Sbjct: 123 VDLLNRHLY 131


>sp|MDH_HALMA|MALATE dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 1 IEILNRYIY 9
+++LNR++Y
Sbjct: 123 VDLLNRHLY 131


>sp|MTQ2_METJA|RELEASE factor glutamine methyltransferase Mtq2|Methanocaldococcus

Query: 2 EILNRYIY 9
EIL+R+IY
Sbjct: 133 EILDRFIY 140


>sp|CSX1_METJA|CRISPR system endoribonuclease Csx1|Methanocaldococcus jannaschii (strain

Query: 2 EILNRYIYF 10
+IL RY+YF
Sbjct: 287 KILKRYLYF 295


>sp|TOP6B_PYRAE|TYPE 2 DNA topoisomerase 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IEILNRYI 8
+E+LN+YI
Sbjct: 456 MEMLNKYI 463


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 EILNRYI 8
E+LNRY+
Sbjct: 671 ELLNRYV 677


>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EILNRYI 8
E+LNRY+
Sbjct: 673 ELLNRYV 679


>sp|TFE_CALMQ|TRANSCRIPTION factor E|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 IEILNRYIY 9
IE++ RY+Y
Sbjct: 5 IELVRRYVY 13


>sp|Y661_METJA|UNCHARACTERIZED protein MJ0661|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EILNRYIYF 10
E+L RY+ F
Sbjct: 58 EVLKRYVRF 66


>sp|Y875_METJA|UNCHARACTERIZED protein MJ0875|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IEILNRYI 8
+E+LN+YI
Sbjct: 126 LELLNKYI 133




146|Sequence|726|735|RYIYFYEKEN

>sp|Y946_ARCFU|UNCHARACTERIZED protein AF_0946|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YIYFYEKEN 10
Y+YFY N
Sbjct: 705 YLYFYAPAN 713


>sp|DTDA_META3|D-AMINOACYL-TRNA deacylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 RYIYFYEKEN 10
RYI F++K N
Sbjct: 247 RYIEFFDKNN 256


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 1 RYIYFY 6
RY YFY
Sbjct: 474 RYTYFY 479


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 RYIYFYEKE 9
R +YF EKE
Sbjct: 391 RTMYFAEKE 399


>sp|MFNA_METST|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosphaera stadtmanae

Query: 4 YFYEKEN 10
Y YE+EN
Sbjct: 104 YLYEEEN 110


>sp|RL6_AERPE|LARGE ribosomal subunit protein uL6|Aeropyrum pernix (strain ATCC 700893

Query: 3 IYFYEKE 9
IY YE+E
Sbjct: 173 IYIYERE 179


>sp|GAPN_SACS2|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Saccharolobus solfataricus

Query: 3 IYFYEKE 9
+YFY KE
Sbjct: 397 MYFYNKE 403


>sp|TMG10_METTL|PROBABLE tRNA (guanine(10)-N2)-dimethyltransferase|Methanothermococcus

Query: 1 RYIYFYEKEN 10
RYI+ Y+K +
Sbjct: 152 RYIHVYKKTD 161


>sp|Y486_METJA|UNCHARACTERIZED protein MJ0486|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YIYFYEKEN 10
YIYFY N
Sbjct: 99 YIYFYPGTN 107


>sp|Y359_METJA|UNCHARACTERIZED protein MJ0359|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IYFYEKE 9
IYFYE+E
Sbjct: 41 IYFYEEE 47




147|Sequence|731|740|YEKENDAVTI

>sp|MCH_METLZ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 YEKENDAVTI 10
YE E+DA I
Sbjct: 128 YEDESDAAVI 137


>sp|SOR_THEKO|SUPEROXIDE reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YEKENDAVTI 10
YEKE D V +
Sbjct: 22 YEKEGDLVKV 31


>sp|SECG_SULTO|PREPROTEIN translocase subunit SecG|Sulfurisphaera tokodaii (strain DSM

Query: 1 YEKENDAVTI 10
YE+EN+ + I
Sbjct: 23 YEEENEKIKI 32


>sp|SECG_SACS2|PREPROTEIN translocase subunit SecG|Saccharolobus solfataricus (strain ATCC

Query: 1 YEKENDAVTI 10
YE+EN+ V I
Sbjct: 23 YEEENEKVKI 32


>sp|SOR_PYRAB|SUPEROXIDE reductase|Pyrococcus abyssi (strain GE5 /

Query: 1 YEKENDAVTI 10
YEKE D V +
Sbjct: 22 YEKEGDLVKV 31




148|Sequence|736|745|DAVTIQVLNQ

***** No hits found ******


149|Sequence|741|750|QVLNQLIQKI

>sp|DTDA_METJA|D-AMINOACYL-TRNA deacylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VLNQLIQKI 10
VLNQLI K+
Sbjct: 213 VLNQLISKM 221


>sp|DTDA_METM7|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain C7 /

Query: 2 VLNQLIQK 9
+LNQLI K
Sbjct: 212 ILNQLISK 219


>sp|DTDA_METVS|D-AMINOACYL-TRNA deacylase|Methanococcus vannielii (strain ATCC 35089

Query: 2 VLNQLIQK 9
+LNQLI K
Sbjct: 212 ILNQLITK 219




150|Sequence|746|755|LIQKIREDLP

>sp|Y1739_ARCFU|UNCHARACTERIZED protein AF_1739|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LIQKIREDLP 10
LI+KI EDLP
Sbjct: 359 LIEKITEDLP 368


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LIQKIREDLP 10
LI+++RE LP
Sbjct: 1090 LIKRVRESLP 1099


>sp|GATB_SULAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfolobus acidocaldarius (strain ATCC

Query: 1 LIQKIREDLP 10
+I+KIR++LP
Sbjct: 283 MIEKIRKELP 292


>sp|TRPB2_SULTO|TRYPTOPHAN synthase beta chain 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LIQKIREDLP 10
+++K+R DLP
Sbjct: 1 MLEKVRFDLP 10


>sp|SYT_PYRNV|THREONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LIQKIREDL 9
LI+KIRED+
Sbjct: 580 LIKKIREDV 588


>sp|NADA_HALMA|QUINOLINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 IQKIREDLP 10
I+ IRED P
Sbjct: 247 IESIREDYP 255


>sp|RL10_METBF|LARGE ribosomal subunit protein uL10|Methanosarcina barkeri (strain

Query: 2 IQKIREDL 9
IQKIR DL
Sbjct: 45 IQKIRRDL 52


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain ATCC

Query: 2 IQKIREDL 9
I+KIRE+L
Sbjct: 230 IEKIREEL 237


>sp|TMBL1_PYRFU|HTH-TYPE sugar sensing transcriptional regulator|Pyrococcus furiosus

Query: 1 LIQKIREDL 9
+++KIREDL
Sbjct: 79 VLEKIREDL 87


>sp|RL10_METMA|LARGE ribosomal subunit protein uL10|Methanosarcina mazei (strain ATCC

Query: 2 IQKIREDL 9
IQKIR DL
Sbjct: 45 IQKIRRDL 52


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LIQKIREDL 9
LIQ+IR+D
Sbjct: 570 LIQQIRDDF 578


>sp|DP2S_METJA|DNA polymerase II small subunit|Methanocaldococcus jannaschii (strain

Query: 1 LIQKIRE 7
LIQKIRE
Sbjct: 33 LIQKIRE 39


>sp|THIC_META3|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 QKIREDLP 10
+K+RE+LP
Sbjct: 394 KKMREELP 401


>sp|HISX_SULAC|HISTIDINOL dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LIQKIREDL 9
LI K+RE+L
Sbjct: 257 LIDKVREEL 265


>sp|RS3_IGNH4|SMALL ribosomal subunit protein uS3|Ignicoccus hospitalis (strain KIN4/I

Query: 1 LIQKIREDL 9
++QKIRE++
Sbjct: 211 IVQKIREEM 219


>sp|AATA_METAR|A-TYPE ATP synthase subunit A|Methanocella arvoryzae (strain DSM 22066

Query: 2 IQKIREDLP 10
++K+R D+P
Sbjct: 197 VEKLRPDIP 205


>sp|BRIX_PYRAB|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus abyssi

Query: 2 IQKIREDLP 10
+ IRED+P
Sbjct: 98 LNPIREDMP 106


>sp|RL10_METAC|LARGE ribosomal subunit protein uL10|Methanosarcina acetivorans (strain

Query: 2 IQKIREDL 9
+QKIR DL
Sbjct: 45 MQKIRRDL 52


>sp|BRIX_PYRFU|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus furiosus

Query: 2 IQKIREDLP 10
+ IRED+P
Sbjct: 98 LNPIREDMP 106


>sp|GATE_PYRAB|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus abyssi (strain GE5 /

Query: 1 LIQKIREDLP 10
L +KI+E+LP
Sbjct: 447 LKKKIKENLP 456


>sp|Y339_METJA|UNCHARACTERIZED protein MJ0339|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LIQKIREDL 9
L++KI EDL
Sbjct: 18 LVEKILEDL 26


>sp|BRIX_PYRHO|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus horikoshii

Query: 2 IQKIREDLP 10
+ IRED+P
Sbjct: 98 LNPIREDMP 106


>sp|TREH1_SULAC|TREHALASE 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LIQKIREDLP 10
+I+K+R ++P
Sbjct: 94 IIRKVRTEIP 103




151|Sequence|751|760|REDLPNLESS

>sp|GCK_PYRHO|GLYCERATE 2-kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 REDLPNLES 9
+EDLPN+ +
Sbjct: 254 KEDLPNVHN 262


>sp|DPOL2_SACS2|DNA polymerase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 REDLPNLESS 10
RE++PN+ S
Sbjct: 526 RENMPNIVKS 535




152|Sequence|756|765|NLESSEETEQ

>sp|PURE_METSM|PROBABLE N5-carboxyaminoimidazole ribonucleotide mutase|Methanobrevibacter

Query: 1 NLESSEETEQ 10
NLE +E TE+
Sbjct: 176 NLELNETTEE 185




153|Sequence|761|770|EETEQINKHF

>sp|MCRC_METJA|METHYL-COENZYME M reductase I operon|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EETEQINKH 9
EE EQIN+H
Sbjct: 97 EEAEQINRH 105


>sp|MCRC_METVO|METHYL-COENZYME M reductase operon protein|Methanococcus voltae

Query: 1 EETEQINKH 9
EE EQ+N+H
Sbjct: 81 EEVEQVNRH 89


>sp|SYP_METS5|PROLINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 EETEQINKH 9
E+TE+INK+
Sbjct: 302 EDTEKINKY 310


>sp|PCP_THELN|PYRROLIDONE-CARBOXYLATE peptidase|Thermococcus litoralis (strain ATCC 51850

Query: 3 TEQINKHF 10
TEQI K+F
Sbjct: 20 TEQIAKYF 27




154|Sequence|766|775|INKHFHNTLE

>sp|Y378_NANEQ|UPF0173 metal-dependent hydrolase NEQ378|Nanoarchaeum equitans (strain

Query: 2 NKHFHNTLE 10
N HF NT+E
Sbjct: 41 NDHFGNTIE 49


>sp|RADA_THEAC|DNA repair and recombination protein|Thermoplasma acidophilum (strain

Query: 1 INKHFHNTL 9
+NKH H+ L
Sbjct: 233 LNKHMHDLL 241


>sp|Y085_METJA|UNCHARACTERIZED lipoprotein MJ0085|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NKHFHNTLE 10
NK F+N+L+
Sbjct: 287 NKEFYNSLK 295


>sp|RADA_HALWD|DNA repair and recombination protein|Haloquadratum walsbyi (strain DSM

Query: 1 INKHFHNTL 9
+NKH H+ +
Sbjct: 254 LNKHLHDLM 262


>sp|RADA_HALVD|DNA repair and recombination protein|Haloferax volcanii (strain ATCC

Query: 1 INKHFHNTL 9
+NKH H+ +
Sbjct: 254 LNKHLHDLM 262


>sp|RADA_THEVO|DNA repair and recombination protein|Thermoplasma volcanium (strain

Query: 1 INKHFHNTL 9
+NKH H+ L
Sbjct: 233 LNKHMHDLL 241


>sp|RADA_METAC|DNA repair and recombination protein|Methanosarcina acetivorans (strain

Query: 1 INKHFHNTL 9
+NKH H L
Sbjct: 236 LNKHMHGLL 244


>sp|DAPAL_THEKO|UNCHARACTERIZED DapA-like lyase TK1237|Thermococcus kodakarensis (strain ATCC

Query: 1 INKHFHNTL 9
+++HF NTL
Sbjct: 188 LDQHFLNTL 196


>sp|RADA_METBU|DNA repair and recombination protein|Methanococcoides burtonii (strain

Query: 1 INKHFHNTL 9
+NKH H L
Sbjct: 236 LNKHLHEIL 244


>sp|RADA_METMA|DNA repair and recombination protein|Methanosarcina mazei (strain ATCC

Query: 1 INKHFHNTL 9
+NKH H L
Sbjct: 236 LNKHMHGLL 244


>sp|RADA_METBF|DNA repair and recombination protein|Methanosarcina barkeri (strain

Query: 1 INKHFHNTL 9
+NKH H L
Sbjct: 236 LNKHMHGLL 244


>sp|DAPAL_THEON|UNCHARACTERIZED DapA-like lyase TON_0506|Thermococcus onnurineus (strain NA1)

Query: 1 INKHFHNTL 9
+++HF NTL
Sbjct: 188 LDQHFLNTL 196


>sp|GNTDO_HALSB|GENTISATE 1,2-dioxygenase|Haloferax sp

Query: 2 NKHFHNTLE 10
+ HFHN ++
Sbjct: 286 DPHFHNAVD 294


>sp|TOP3_SACS2|DNA topoisomerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 HFHNTLE 10
HFHN E
Sbjct: 442 HFHNVKE 448


>sp|RADA_HALSA|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 1 INKHFHN 7
+NKH H+
Sbjct: 254 LNKHLHD 260


>sp|RADA_HALS3|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 1 INKHFHN 7
+NKH H+
Sbjct: 254 LNKHLHD 260


>sp|PURL_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 KHFHNTLE 10
KH HN ++
Sbjct: 570 KHIHNVVQ 577


>sp|TYW2_PYRHO|TRNA(PHE) (4-demethylwyosine(37)-C(7))

Query: 4 HFHNTL 9
H+HNT+
Sbjct: 222 HYHNTV 227


>sp|HOSA_PYRHO|HOMOCITRATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 INKHFHNTL 9
+N H HN L
Sbjct: 185 VNVHCHNDL 193




155|Sequence|771|780|HNTLEHLRLR

>sp|RL30_SACI6|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 HNTLEHLRLR 10
+ TLE LRLR
Sbjct: 21 NETLEMLRLR 30


>sp|RL30_SACI4|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 HNTLEHLRLR 10
+ TLE LRLR
Sbjct: 21 NETLEMLRLR 30


>sp|RL30_SACI3|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 HNTLEHLRLR 10
+ TLE LRLR
Sbjct: 21 NETLEMLRLR 30


>sp|RL30_SACI2|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 HNTLEHLRLR 10
+ TLE LRLR
Sbjct: 21 NETLEMLRLR 30


>sp|RL30_SACI1|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 HNTLEHLRLR 10
+ TLE LRLR
Sbjct: 21 NETLEMLRLR 30


>sp|RL30_SACI7|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 HNTLEHLRLR 10
+ TLE LRLR
Sbjct: 21 NETLEMLRLR 30


>sp|SYDND_METMJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 HNTLEHL 7
HNT+ HL
Sbjct: 214 HNTVRHL 220


>sp|SYDND_METLZ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 HNTLEHL 7
HNT+ HL
Sbjct: 214 HNTVRHL 220


>sp|SYDND_METHJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 HNTLEHL 7
HNT +HL
Sbjct: 214 HNTTKHL 220


>sp|UREG_METS5|UREASE accessory protein UreG|Metallosphaera sedula (strain ATCC 51363

Query: 1 HNTLEHLRL 9
HN +E LR+
Sbjct: 50 HNLVERLRI 58


>sp|FAU1_PYRAB|PROBABLE ribonuclease FAU-1|Pyrococcus abyssi (strain GE5 /

Query: 1 HNTLEHLRL 9
HN L HL +
Sbjct: 139 HNVLPHLSI 147


>sp|SYDND_METST|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 HNTLEHL 7
H+TL HL
Sbjct: 225 HDTLRHL 231


>sp|SYD_THEAC|ASPARTATE--TRNA(ASP) ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HNTLEHL 7
HNT HL
Sbjct: 214 HNTTRHL 220


>sp|SYD_PYRFU|ASPARTATE--TRNA(ASP) ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HNTLEHL 7
HNT HL
Sbjct: 218 HNTTRHL 224


>sp|SYD_PYRAB|ASPARTATE--TRNA(ASP) ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 HNTLEHL 7
HNT HL
Sbjct: 218 HNTTRHL 224




156|Sequence|776|785|HLRLRRESPE

>sp|RF1_THESM|PEPTIDE chain release factor subunit|Thermococcus sibiricus (strain DSM

Query: 1 HLRLRRESPE 10
HL+L R++PE
Sbjct: 75 HLKLYRQTPE 84


>sp|RF1_THEON|PEPTIDE chain release factor subunit|Thermococcus onnurineus (strain NA1)

Query: 1 HLRLRRESPE 10
HL+L R++PE
Sbjct: 75 HLKLYRKTPE 84


>sp|RF1_PYRFU|PEPTIDE chain release factor subunit|Pyrococcus furiosus (strain ATCC

Query: 1 HLRLRRESPE 10
HL+L +++PE
Sbjct: 78 HLKLYKQTPE 87


>sp|RF1_PYRAB|PEPTIDE chain release factor subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 HLRLRRESPE 10
HL+L +++PE
Sbjct: 75 HLKLYKQTPE 84


>sp|RF1_PYRHO|PEPTIDE chain release factor subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 HLRLRRESPE 10
HL+L +++PE
Sbjct: 78 HLKLYKQTPE 87


>sp|TRPD_PYRAR|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum arsenaticum (strain DSM

Query: 2 LRLRRESPE 10
+R+R ESPE
Sbjct: 45 MRVRGESPE 53


>sp|IDI2_METBF|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina barkeri (strain Fusaro /

Query: 1 HLRLRRESP 9
HL+L ESP
Sbjct: 12 HLKLCAESP 20


>sp|IDI2_METAC|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HLRLRRESP 9
HL+L ESP
Sbjct: 12 HLKLCAESP 20


>sp|IDI2_METMA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HLRLRRESP 9
HL+L ESP
Sbjct: 12 HLKLCAESP 20


>sp|RF1_THEKO|PEPTIDE chain release factor subunit|Thermococcus kodakarensis (strain

Query: 1 HLRLRRESPE 10
HL+L +++PE
Sbjct: 75 HLKLYKQTPE 84


>sp|TRUA_NATPD|TRNA pseudouridine synthase A|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LRLRRESP 9
+RLRR+ P
Sbjct: 154 MRLRRQGP 161




157|Sequence|781|790|RESPESEGPI

***** No hits found ******


158|Sequence|786|796|SEGPIYEGLIL

>sp|NIKMN_ARCFU|PUTATIVE fused nickel transport protein|Archaeoglobus fulgidus (strain ATCC

Query: 2 EGPIYEGLI 10
E PIYEGL+
Sbjct: 248 ENPIYEGLL 256


>sp|CDC6_METST|ORC1-TYPE DNA replication protein|Methanosphaera stadtmanae (strain ATCC

Query: 1 SEGPIYEGLI 10
SEG I EG+I
Sbjct: 224 SEGAISEGVI 233


>sp|THPR_PYRFU|RNA 2',3'-cyclic phosphodiesterase|Pyrococcus furiosus (strain ATCC

Query: 2 EGPIYEGL 9
+GPIYE L
Sbjct: 170 KGPIYETL 177


>sp|PDXS_METJA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanocaldococcus jannaschii

Query: 4 PIYEGLIL 11
PIYEG L
Sbjct: 214 PIYEGFTL 221


>sp|THPR_PYRHO|RNA 2',3'-cyclic phosphodiesterase|Pyrococcus horikoshii (strain ATCC

Query: 2 EGPIYEGL 9
+GPIYE L
Sbjct: 170 KGPIYETL 177


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 EGPIYEGLI 10
+GP+ +GLI
Sbjct: 894 KGPVVKGLI 902


>sp|CSG_METJA|S-LAYER protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PIYEGLI 10
P+Y+G+I
Sbjct: 260 PVYDGII 266


>sp|GATD_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Archaeoglobus fulgidus (strain ATCC

Query: 1 SEGPIYEGLIL 11
++G I+EG+++
Sbjct: 24 AKGKIFEGIVM 34


>sp|RL30_METAR|LARGE ribosomal subunit protein uL30|Methanocella arvoryzae (strain DSM

Query: 2 EGPIYEGLI 10
E P Y+G+I
Sbjct: 37 ENPTYKGMI 45


>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 1 SEGPIYEGLI 10
S G +YEG++
Sbjct: 481 SRGVVYEGIV 490


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 SEGPIYE 7
+EGP YE
Sbjct: 188 NEGPCYE 194


>sp|TRM1_THEAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermoplasma acidophilum

Query: 2 EGPIYEG 8
EGP+++G
Sbjct: 245 EGPVWKG 251


>sp|PYRK_THEKO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermococcus kodakarensis

Query: 2 EGPIYEG 8
+GP++EG
Sbjct: 220 DGPVFEG 226


>sp|RNP1_METKA|RIBONUCLEASE P protein component 1|Methanopyrus kandleri (strain AV19 /

Query: 1 SEGPIYEGL 9
S GP YEGL
Sbjct: 23 SLGPPYEGL 31


>sp|NNRD_NATMM|ADP-DEPENDENT (S)-NAD(P)H-hydrate dehydratase|Natrialba magadii (strain ATCC

Query: 2 EGPIYE 7
+GPIYE
Sbjct: 149 DGPIYE 154


>sp|PUR1_METJA|AMIDOPHOSPHORIBOSYLTRANSFERASE jannaschii (strain ATCC 43067

Query: 4 PIYEGLI 10
P YEGLI
Sbjct: 317 PYYEGLI 323


>sp|IF2P_PYRAB|PROBABLE translation initiation factor IF-2|Pyrococcus abyssi (strain GE5 /

Query: 1 SEGPIYEGLI 10
SE P YE L+
Sbjct: 296 SEAPTYEELM 305


>sp|GSA_NATPD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SEGPIY 6
SEGP+Y
Sbjct: 81 SEGPMY 86


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 SEGPIYE 7
+EGP YE
Sbjct: 191 NEGPCYE 197


>sp|GSA_HALWD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SEGPIY 6
SEGP+Y
Sbjct: 80 SEGPMY 85


>sp|TRPE_HALVD|ANTHRANILATE synthase component 1|Haloferax volcanii (strain ATCC 29605

Query: 2 EGPIYEGLI 10
+G IY+G+I
Sbjct: 263 DGDIYQGVI 271


>sp|GATD_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcoides burtonii (strain DSM

Query: 2 EGPIYEGLIL 11
+G YEG+++
Sbjct: 14 DGNTYEGIVM 23


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 IYEGLIL 11
+YEG+IL
Sbjct: 571 VYEGVIL 577






THE END