VP13C_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|LDAVVSELVM

>sp|SYP_HALMA|PROLINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 DAVVSELVM 10
DA+ +E+VM
Sbjct: 445 DAIAAEIVM 453


>sp|UPPP_HALMA|UNDECAPRENYL-DIPHOSPHATASE marismortui (strain ATCC 43049

Query: 1 LDAVVSEL 8
LDA VSEL
Sbjct: 109 LDAAVSEL 116




2|SequenceR|15|6|LFRNLLDAVV

>sp|SFSA_PICTO|SUGAR fermentation stimulation protein homolog|Picrophilus torridus

Query: 2 FRNLLDAVV 10
F NL+DAV+
Sbjct: 16 FENLIDAVI 24


>sp|RSMA_METVS|PROBABLE ribosomal RNA small subunit|Methanococcus vannielii (strain ATCC

Query: 1 LFRNLLDAV 9
FRN+L+A+
Sbjct: 193 FFRNVLNAI 201




3|SequenceR|20|11|EVYDGLFRNL

>sp|Y1681_ARCFU|UNCHARACTERIZED protein AF_1681|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EVYDGLFRNL 10
EVYD LFR+L
Sbjct: 196 EVYDKLFRSL 205


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 2 VYDGLFRNL 10
+++GLFRN
Sbjct: 429 IFEGLFRNF 437


>sp|TOP6A_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 1 EVYDGLFR 8
EVY GLFR
Sbjct: 142 EVYTGLFR 149


>sp|CYDK_THEKO|CYTIDINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VYDGLFRNL 10
VYDG FR
Sbjct: 211 VYDGSFREF 219


>sp|HMGCS_HALVD|HYDROXYMETHYLGLUTARYL-COA synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 EVYDGLFRN 9
+VYDG FR+
Sbjct: 102 QVYDGDFRH 110


>sp|PYRC_METTH|DIHYDROOROTASE thermautotrophicus (strain ATCC 29096

Query: 4 DGLFRNL 10
DGLFR L
Sbjct: 151 DGLFREL 157


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VYDGLFRNL 10
+YD +F+N+
Sbjct: 250 IYDAIFKNI 258


>sp|IF2P_HALMA|PROBABLE translation initiation factor IF-2|Haloarcula marismortui (strain

Query: 2 VYDGLFRN 9
+YDG RN
Sbjct: 262 IYDGTIRN 269


>sp|SPSS2_METHJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EVYDGLFR 8
EV+D LF+
Sbjct: 7 EVFDALFK 14


>sp|HEM1_METMA|GLUTAMYL-TRNA reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 DGLFRNL 10
DGL RNL
Sbjct: 28 DGLLRNL 34


>sp|Y1726_THEGJ|MEMO1 family protein TGAM_1726|Thermococcus gammatolerans (strain DSM

Query: 4 DGLFRNL 10
DGLFR L
Sbjct: 229 DGLFREL 235


>sp|MVHA_METTM|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter marburgensis (strain ATCC

Query: 1 EVYDGLFR 8
+VYDG+ R
Sbjct: 234 DVYDGIVR 241


>sp|MVHA_METTH|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter thermautotrophicus

Query: 1 EVYDGLFR 8
+VYDG+ R
Sbjct: 234 DVYDGIVR 241


>sp|AATA_SULTO|A-TYPE ATP synthase subunit A|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EVYDGLFRNL 10
++YDGL R L
Sbjct: 83 KIYDGLQRPL 92


>sp|THI4_METIK|THIAMINE thiazole synthase|Methanotorris igneus (strain DSM 5666

Query: 1 EVYDGLF 7
EVY GLF
Sbjct: 216 EVYPGLF 222


>sp|CSG_METVS|S-LAYER protein|Methanococcus vannielii (strain ATCC 35089

Query: 1 EVYDGLFR 8
EVYDG+ +
Sbjct: 270 EVYDGVVK 277


>sp|MVHA_METFE|F420-NON-REDUCING hydrogenase subunit A|Methanothermus fervidus

Query: 1 EVYDGLFR 8
+VYDG+ R
Sbjct: 234 DVYDGVVR 241


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 EVYDGLFRNL 10
E+Y +F NL
Sbjct: 182 EIYKKIFNNL 191


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 EVYDGLFRNL 10
E+Y +F NL
Sbjct: 182 EIYKKIFNNL 191


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 EVYDGLFRNL 10
E+Y +F NL
Sbjct: 182 EIYKKIFNNL 191


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 EVYDGLFRNL 10
E+Y +F NL
Sbjct: 182 EIYKKIFNNL 191


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 EVYDGLFRNL 10
E+Y +F NL
Sbjct: 182 EIYKKIFNNL 191


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 EVYDGLFRNL 10
E+Y +F NL
Sbjct: 182 EIYKKIFNNL 191


>sp|AATA_CENSY|A-TYPE ATP synthase subunit A|Cenarchaeum symbiosum (strain A)

Query: 1 EVYDGLFRNL 10
++YDG+ R L
Sbjct: 83 QIYDGIQRPL 92


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EVYDGLFRNL 10
E YDG NL
Sbjct: 494 EYYDGFVYNL 503


>sp|ASSY_METKA|ARGININOSUCCINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 VYDGLFRN 9
VYDGL+ N
Sbjct: 309 VYDGLWFN 316




4|SequenceR|25|16|SKNLNEVYDG

>sp|HTR2_HALMA|SENSORY rhodopsin II transducer|Haloarcula marismortui (strain ATCC 43049

Query: 1 SKNLNEVYDG 10
SK++NE+++G
Sbjct: 482 SKSINEIFEG 491


>sp|MCRW_METJA|METHYL-COENZYME M reductase II operon|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KNLNEVYD 9
K LNE+YD
Sbjct: 32 KVLNEIYD 39


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 2 KNLNEVYDG 10
+ +NE+YDG
Sbjct: 49 QRINELYDG 57


>sp|RPO1C_METMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina mazei (strain ATCC

Query: 1 SKNLNEVYD 9
+ N+NE+Y+
Sbjct: 268 TNNINEIYE 276


>sp|RPO1C_METAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina acetivorans (strain

Query: 1 SKNLNEVYD 9
+ N+NE+Y+
Sbjct: 265 TNNINEIYE 273


>sp|HTR2_HALVA|SENSORY rhodopsin II transducer|Haloarcula vallismortis (Halobacterium

Query: 1 SKNLNEVYDG 10
SK++NE+++G
Sbjct: 142 SKSINEIFEG 151


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 SKNLNEVYD 9
+K LNE+Y+
Sbjct: 465 TKALNEIYE 473


>sp|DPO4_PICTO|DNA polymerase IV|Picrophilus torridus (strain ATCC 700027

Query: 1 SKNLNEV 7
SKNLNE+
Sbjct: 187 SKNLNEI 193


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SKNLNEVYDG 10
SKNLN+ + G
Sbjct: 917 SKNLNDSFSG 926


>sp|Y762_METJA|UNCHARACTERIZED transporter MJ0762|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KNLNEVYDG 10
K +N+VY G
Sbjct: 326 KTINKVYSG 334


>sp|CCA_PICTO|CCA-ADDING enzyme|Picrophilus torridus (strain ATCC 700027

Query: 2 KNLNEVYDG 10
KNLN++ DG
Sbjct: 395 KNLNKLKDG 403


>sp|SYH_SULAC|HISTIDINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 LNEVYDG 10
LNE+YD
Sbjct: 144 LNEIYDS 150


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 KNLNEVYD 9
KNLNE+ +
Sbjct: 546 KNLNEILE 553


>sp|Y2028_ARCFU|UNCHARACTERIZED protein AF_2028|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KNLNEVYD 9
KNLN YD
Sbjct: 210 KNLNTSYD 217




5|SequenceR|30|21|GLKLQSKNLN

>sp|FSX1_UNCAX|FUSEXIN 1|Uncultured archaeon

Query: 1 GLKLQSKNLN 10
G KL+S+N++
Sbjct: 574 GFKLESRNVS 583


>sp|AATA_METBF|A-TYPE ATP synthase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 2 LKLQSKNL 9
LKL+SKN+
Sbjct: 540 LKLESKNV 547


>sp|RNP3_METM5|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C5 /

Query: 1 GLKLQSKNLN 10
GLKL +KN N
Sbjct: 59 GLKLSTKNQN 68




6|SequenceR|35|26|NGGWIGLKLQ

>sp|ARLY_SULAC|ARGININOSUCCINATE lyase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GGWIGL 7
GGW+GL
Sbjct: 89 GGWVGL 94


>sp|ARLY_PYRAR|ARGININOSUCCINATE lyase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GGWIGL 7
GGW+GL
Sbjct: 94 GGWVGL 99


>sp|ARLY_PYRAE|ARGININOSUCCINATE lyase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GGWIGL 7
GGW+GL
Sbjct: 94 GGWVGL 99


>sp|ARLY_PYRCJ|ARGININOSUCCINATE lyase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GGWIGL 7
GGW+GL
Sbjct: 94 GGWLGL 99


>sp|Y1569_ARCFU|UNCHARACTERIZED protein AF_1569|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GGWIGLKLQ 10
G W+GLK+
Sbjct: 248 GSWLGLKVH 256


>sp|SDX_SACS2|PROBABLE sulredoxin|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NGGWI 5
NGGWI
Sbjct: 101 NGGWI 105


>sp|ARLY_SACS2|ARGININOSUCCINATE lyase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NGGWIGL 7
+ GWIGL
Sbjct: 87 DAGWIGL 93


>sp|Y1221_METJA|UNCHARACTERIZED protein MJ1221|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GGWIGLKLQ 10
GG+IGLK +
Sbjct: 281 GGYIGLKYK 289


>sp|ARLY_SULTO|ARGININOSUCCINATE lyase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GGWIGL 7
GGW+G
Sbjct: 89 GGWVGF 94


>sp|ARLY_PYRNV|ARGININOSUCCINATE lyase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 GGWIGL 7
GWIGL
Sbjct: 94 AGWIGL 99


>sp|DLDH_HALVD|DIHYDROLIPOYL dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 2 GGWIGLKL 9
GG+IG++L
Sbjct: 187 GGYIGMEL 194


>sp|DLDH_HALSA|DIHYDROLIPOYL dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GGWIGLKL 9
GG+IG++L
Sbjct: 187 GGYIGMEL 194


>sp|Y1013_ARCFU|UNCHARACTERIZED protein AF_1013|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 WIGLKL 9
WIGLK+
Sbjct: 31 WIGLKV 36


>sp|NSR_PYRAB|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus abyssi (strain GE5

Query: 2 GGWIGLKL 9
GG+IGL++
Sbjct: 160 GGYIGLEM 167


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 WIGLKL 9
WIG KL
Sbjct: 806 WIGFKL 811


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 WIGLKL 9
WIG KL
Sbjct: 821 WIGFKL 826


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 WIGLKL 9
WIG KL
Sbjct: 817 WIGFKL 822


>sp|NNR_HYPBU|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Hyperthermus butylicus (strain

Query: 1 NGGWIGLK 8
N WIG+K
Sbjct: 24 NSEWIGVK 31


>sp|PORA_METTM|PYRUVATE synthase subunit PorA|Methanothermobacter marburgensis (strain ATCC

Query: 4 WIGLK 8
WIGLK
Sbjct: 375 WIGLK 379


>sp|PORA_METTH|PYRUVATE synthase subunit PorA|Methanothermobacter thermautotrophicus

Query: 4 WIGLK 8
WIGLK
Sbjct: 375 WIGLK 379


>sp|DAPF_METKA|DIAMINOPIMELATE epimerase|Methanopyrus kandleri (strain AV19 /

Query: 2 GGWIGLKL 9
GGWI +++
Sbjct: 108 GGWIAVEV 115


>sp|ARLY_PYRIL|ARGININOSUCCINATE lyase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GGWIGL 7
GW+GL
Sbjct: 94 AGWVGL 99


>sp|TMG10_METTL|PROBABLE tRNA (guanine(10)-N2)-dimethyltransferase|Methanothermococcus

Query: 2 GGWIGLKL 9
GG++GLKL
Sbjct: 32 GGFMGLKL 39


>sp|Y799_METJA|UNCHARACTERIZED protein MJ0799|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GGWIG 6
GGW+G
Sbjct: 203 GGWLG 207


>sp|Y1281_METJA|UNCHARACTERIZED protein MJ1281|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 WIGLK 8
WIGLK
Sbjct: 584 WIGLK 588


>sp|NIKMN_ARCFU|PUTATIVE fused nickel transport protein|Archaeoglobus fulgidus (strain ATCC

Query: 2 GGWIGLKL 9
GWIG+ L
Sbjct: 137 AGWIGITL 144




7|SequenceR|40|31|NDLAVNGGWI

>sp|PYRG_METMP|CTP synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NDLAVNGGWI 10
ND VN WI
Sbjct: 317 NDTKVNIAWI 326


>sp|PXPA_PYRFU|5-OXOPROLINASE subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 4 AVNGGWI 10
A+NG WI
Sbjct: 207 AINGEWI 213


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 DLAVNGGWI 10
DL NG WI
Sbjct: 270 DLKYNGLWI 278


>sp|PXPA_THEON|5-OXOPROLINASE subunit A|Thermococcus onnurineus (strain NA1)

Query: 4 AVNGGWI 10
A+NG WI
Sbjct: 207 AINGEWI 213


>sp|LYEL_HALSA|LYCOPENE elongase/hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 3 LAVNGGWI 10
LAV GGW+
Sbjct: 162 LAVAGGWL 169


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 DLAVNGGWI 10
DL NG WI
Sbjct: 273 DLKYNGIWI 281


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 DLAVNGGWI 10
DL NG WI
Sbjct: 273 DLKYNGIWI 281


>sp|PYRG_METJA|CTP synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NDLAVNGGWI 10
ND VN WI
Sbjct: 320 NDTKVNINWI 329


>sp|PCKG_SULAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 AVNGGWI 10
AVN GW+
Sbjct: 228 AVNEGWL 234


>sp|PXPA_PYRHO|5-OXOPROLINASE subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 AVNGGWI 10
A+NG W+
Sbjct: 207 AINGEWV 213


>sp|PXPA_THEKO|5-OXOPROLINASE subunit A|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 AVNGGWI 10
A+NG W+
Sbjct: 207 AINGEWV 213


>sp|PXPA_PYRAB|5-OXOPROLINASE subunit A|Pyrococcus abyssi (strain GE5 /

Query: 4 AVNGGWI 10
A+NG W+
Sbjct: 207 AINGEWV 213




8|SequenceR|45|36|EKIQLNDLAV

>sp|ILVD_SULTO|DIHYDROXY-ACID dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EKIQLNDLAV 10
EKIQ ND+ V
Sbjct: 426 EKIQENDVVV 435




9|SequenceR|50|41|ESLANEKIQL

>sp|OTC_AERPE|ORNITHINE carbamoyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ESLANEKIQL 10
ES+A EK+QL
Sbjct: 241 ESMAEEKVQL 250


>sp|Y1002_PYRHO|UPF0282 protein PH1002|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SLANEKIQ 9
SLA EKIQ
Sbjct: 53 SLAREKIQ 60


>sp|MTTB2_METMA|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SLANEKIQ 9
++ANEK+Q
Sbjct: 455 AVANEKVQ 462


>sp|RFCS_METVS|REPLICATION factor C small subunit|Methanococcus vannielii (strain ATCC 35089

Query: 4 ANEKIQL 10
ANE+IQL
Sbjct: 298 ANERIQL 304


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 4 ANEKIQL 10
ANE+IQL
Sbjct: 1829 ANERIQL 1835


>sp|KHSE_META3|HOMOSERINE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 ESLANEKIQL 10
E+L+NEKI +
Sbjct: 45 ETLSNEKITI 54




10|SequenceR|55|46|FPVDLESLAN

>sp|HEM3_METS5|PROBABLE porphobilinogen deaminase|Metallosphaera sedula (strain ATCC 51363

Query: 1 FPVDLESL 8
FP+D+ES
Sbjct: 176 FPLDVESF 183


>sp|COXX_CALMQ|PROTOHEME IX farnesyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 2 PVDLESL 8
P+DLES+
Sbjct: 155 PIDLESI 161




11|SequenceR|60|51|GAKVKFPVDL

>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AKVKFPVDL 10
+K+K PVDL
Sbjct: 484 SKIKLPVDL 492


Query: 3 KVKFPVDL 10
K+K PVDL
Sbjct: 504 KIKLPVDL 511


>sp|MAP2_PYRAB|METHIONINE aminopeptidase|Pyrococcus abyssi (strain GE5 /

Query: 1 GAKVKFPVDL 10
GAK FPV+L
Sbjct: 45 GAKPAFPVNL 54


>sp|Y2365_ARCFU|IRON-SULFUR cluster assembly SufBD family|Archaeoglobus fulgidus (strain ATCC

Query: 1 GAKVKFPVD 9
GAKV+ PV+
Sbjct: 101 GAKVEIPVE 109


>sp|TMCA_PYRFU|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus furiosus (strain ATCC

Query: 3 KVKFPVDL 10
KVKFP D+
Sbjct: 4 KVKFPKDI 11


>sp|SECY_HALSA|PROTEIN translocase subunit SecY|Halobacterium salinarum (strain ATCC

Query: 1 GAKVKFPVDL 10
GA+ +FPV L
Sbjct: 278 GARGRFPVKL 287


>sp|RPO6_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo6|Archaeoglobus fulgidus (strain ATCC

Query: 1 GAKVKFPVD 9
G KVKFP +
Sbjct: 2 GIKVKFPFE 10


>sp|SECY_HALVD|PROTEIN translocase subunit SecY|Haloferax volcanii (strain ATCC 29605

Query: 1 GAKVKFPVDL 10
GA+ +FPV L
Sbjct: 278 GARGRFPVKL 287


>sp|SECY_HALMA|PROTEIN translocase subunit SecY|Haloarcula marismortui (strain ATCC 43049

Query: 1 GAKVKFPVDL 10
GA+ +FPV L
Sbjct: 278 GARGRFPVKL 287


>sp|RS15_ARCFU|SMALL ribosomal subunit protein uS15|Archaeoglobus fulgidus (strain

Query: 1 GAKVKFPVDL 10
G ++K+P DL
Sbjct: 79 GVEIKYPEDL 88


>sp|RS2_METVS|SMALL ribosomal subunit protein uS2|Methanococcus vannielii (strain ATCC

Query: 1 GAKVKFP 7
GAKVK P
Sbjct: 200 GAKVKMP 206


>sp|DCDA_THEAC|DIAMINOPIMELATE decarboxylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GAKVKFPVD 9
GA+ KF +D
Sbjct: 160 GARTKFGID 168


>sp|RNJ_METJA|RIBONUCLEASE J|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VKFPVDL 10
VKFP DL
Sbjct: 285 VKFPEDL 291


>sp|IDI2_THEAC|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GAKVKFPV 8
G K+KFP+
Sbjct: 51 GKKLKFPM 58


>sp|Y018_METJA|UNCHARACTERIZED protein MJ0018|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GAKVKF 6
GAKVKF
Sbjct: 217 GAKVKF 222


>sp|HEM11_PYRCJ|GLUTAMYL-TRNA reductase 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GAKVKFPVDL 10
G++VK VDL
Sbjct: 244 GSRVKLVVDL 253


>sp|RNP1_PYRAB|RIBONUCLEASE P protein component 1|Pyrococcus abyssi (strain GE5 /

Query: 1 GAKVKFP 7
GAK+K P
Sbjct: 102 GAKIKIP 108


>sp|SECY_ARCFU|PROTEIN translocase subunit SecY|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GAKVKFPVDL 10
GA+ +FP+ L
Sbjct: 278 GARGRFPIKL 287


>sp|TOP6B_PYRAE|TYPE 2 DNA topoisomerase 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 KVKFPVDL 10
KVKFP L
Sbjct: 396 KVKFPAPL 403


>sp|ALF1_PYRFU|FRUCTOSE-BISPHOSPHATE aldolase class 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GAKVKFPVDL 10
GAK + PVD
Sbjct: 218 GAKTENPVDF 227


>sp|MAP2_PYRFU|METHIONINE aminopeptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GAKVKFPVDL 10
G K FPV+L
Sbjct: 45 GGKPAFPVNL 54


>sp|TRMY_PYRFU|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus furiosus

Query: 3 KVKFPVD 9
KVKFP D
Sbjct: 143 KVKFPQD 149




12|SequenceR|65|56|LKDIQGAKVK

>sp|RTCA_THEON|RNA 3'-terminal phosphate cyclase|Thermococcus onnurineus (strain

Query: 1 LKDIQGAKVK 10
LK++ GAKVK
Sbjct: 57 LKELSGAKVK 66


>sp|Y1999_ARCFU|UNCHARACTERIZED protein AF_1999|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LKDIQGAKV 9
LKDI+G +V
Sbjct: 89 LKDIEGFEV 97


>sp|PGK2_METAC|PHOSPHOGLYCERATE kinase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LKDIQGAKV 9
LKD++ AKV
Sbjct: 52 LKDLESAKV 60




13|SequenceR|70|61|PIKLTLKDIQ

>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PIKLTLKDI 9
P+KLTL+D+
Sbjct: 935 PVKLTLEDV 943


>sp|Y1999_ARCFU|UNCHARACTERIZED protein AF_1999|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PIKLTLKDIQ 10
P K LKDI+
Sbjct: 84 PFKTNLKDIE 93


>sp|DHE4_SACSH|NADP-SPECIFIC glutamate dehydrogenase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 PIKLTLKDIQ 10
P KLTLK+++
Sbjct: 119 PKKLTLKELE 128


>sp|GGR_METVS|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PIKLTLKD 8
PIK T KD
Sbjct: 264 PIKKTFKD 271


>sp|Y1096_ARCFU|UNCHARACTERIZED protein AF_1096|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IKLTLKDIQ 10
++LTL DIQ
Sbjct: 119 VELTLVDIQ 127


>sp|DNAG_NANEQ|DNA primase DnaG|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 LTLKDIQ 10
+TLKDIQ
Sbjct: 365 ITLKDIQ 371


>sp|SRP54_SULAC|SIGNAL recognition particle 54 kDa|Sulfolobus acidocaldarius (strain ATCC

Query: 3 KLTLKDI 9
KLTL+DI
Sbjct: 325 KLTLRDI 331


>sp|SRP54_SULTO|SIGNAL recognition particle 54 kDa|Sulfurisphaera tokodaii (strain DSM

Query: 3 KLTLKDI 9
KLTL+DI
Sbjct: 325 KLTLRDI 331




14|SequenceR|75|66|YLNKWPIKLT

>sp|HYD1A_PYRFU|SULFHYDROGENASE 1 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LNKWPIK 8
L KWPIK
Sbjct: 329 LAKWPIK 335


>sp|FTHS_HALMA|FORMATE--TETRAHYDROFOLATE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 LNKWPI 7
LN+WP+
Sbjct: 330 LNQWPV 335


>sp|AATA_METTH|A-TYPE ATP synthase subunit A|Methanothermobacter thermautotrophicus

Query: 2 LNKWPIK 8
L KWP++
Sbjct: 189 LQKWPVR 195


>sp|AATA_METS3|A-TYPE ATP synthase subunit A|Methanobrevibacter smithii (strain ATCC

Query: 2 LNKWPIK 8
L KWP++
Sbjct: 189 LQKWPVR 195


>sp|GLCD2_VULM7|GLUCOSE 1-dehydrogenase 2|Vulcanisaeta moutnovskia (strain 768-28)

Query: 2 LNKWPIKL 9
N WP KL
Sbjct: 311 FNNWPAKL 318


>sp|AATA1_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LNKWPIKL 9
++KWP+++
Sbjct: 187 MHKWPVRM 194


>sp|AATA_STAMF|A-TYPE ATP synthase subunit A|Staphylothermus marinus (strain ATCC 43588

Query: 2 LNKWPIK 8
L KWP++
Sbjct: 187 LQKWPVR 193


>sp|AATA_METTP|A-TYPE ATP synthase subunit A|Methanothrix thermoacetophila (strain DSM

Query: 2 LNKWPIK 8
L KWP++
Sbjct: 184 LQKWPVR 190


>sp|AATA_METAR|A-TYPE ATP synthase subunit A|Methanocella arvoryzae (strain DSM 22066

Query: 2 LNKWPIKL 9
++KWP+++
Sbjct: 185 MHKWPVRV 192


>sp|Y3021_SACS2|UNCHARACTERIZED protein SSO3021|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LNKWPIKLT 10
LN +PI+LT
Sbjct: 541 LNDFPIRLT 549


>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YLNKWPIKL 9
YLN++PI +
Sbjct: 793 YLNEYPIAV 801


>sp|AATA_METMJ|A-TYPE ATP synthase subunit A|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LNKWPIKL 9
L +WP+++
Sbjct: 190 LQRWPVRV 197


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 2 LNKWPIKL 9
+ KWP+++
Sbjct: 188 MQKWPVRV 195


>sp|AATA_METMP|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain DSM 14266

Query: 2 LNKWPIK 8
+ KWP++
Sbjct: 188 MQKWPVR 194


>sp|AATA_METM7|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C7 /

Query: 2 LNKWPIK 8
+ KWP++
Sbjct: 188 MQKWPVR 194


>sp|AATA_METM6|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C6 /

Query: 2 LNKWPIK 8
+ KWP++
Sbjct: 188 MQKWPVR 194


>sp|AATA_METM5|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C5 /

Query: 2 LNKWPIK 8
+ KWP++
Sbjct: 188 MQKWPVR 194


>sp|AATA_METBF|A-TYPE ATP synthase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 2 LNKWPIK 8
+ KWP++
Sbjct: 184 MQKWPVR 190


>sp|AATA_METBU|A-TYPE ATP synthase subunit A|Methanococcoides burtonii (strain DSM 6242

Query: 2 LNKWPIK 8
+ KWP++
Sbjct: 184 MQKWPVR 190


>sp|AATA_META3|A-TYPE ATP synthase subunit A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LNKWPIK 8
+ KWP++
Sbjct: 189 MQKWPVR 195


>sp|AATA_SACS2|A-TYPE ATP synthase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 2 LNKWPIKL 9
+ KWP+++
Sbjct: 189 MQKWPVRI 196


>sp|AATA_METVS|A-TYPE ATP synthase subunit A|Methanococcus vannielii (strain ATCC 35089

Query: 2 LNKWPIK 8
+ KWP++
Sbjct: 188 MQKWPVR 194


>sp|Y155_ARCFU|UNCHARACTERIZED protein AF_0155|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LNKWPIKL 9
+ +WP+K+
Sbjct: 4 VKQWPVKI 11


>sp|AATA_METJA|A-TYPE ATP synthase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LNKWPIK 8
+ KWP++
Sbjct: 190 MQKWPVR 196


>sp|AATA_METS5|A-TYPE ATP synthase subunit A|Metallosphaera sedula (strain ATCC 51363

Query: 2 LNKWPIKL 9
+ KWP+++
Sbjct: 189 MQKWPVRV 196


>sp|AATA_ARCFU|A-TYPE ATP synthase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 NKWPIKL 9
+KWP+++
Sbjct: 191 HKWPVRI 197


>sp|AATC_THEAC|A-TYPE ATP synthase subunit C|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YLNKWPIK 8
YL+KW I+
Sbjct: 93 YLSKWDIE 100


>sp|T1S2_METJA|TYPE I restriction enzyme MjaVIII|Methanocaldococcus jannaschii (strain

Query: 1 YLNKWP 6
YLNK+P
Sbjct: 275 YLNKYP 280


>sp|AATA_DESSY|A-TYPE ATP synthase subunit A|Desulfurococcus sp. (strain SY)

Query: 3 NKWPIKL 9
+KWP+++
Sbjct: 188 HKWPVRV 194


>sp|PRIS_PYRHO|DNA primase small subunit PriS|Pyrococcus horikoshii (strain ATCC

Query: 1 YLNKWPIK 8
Y N+W +K
Sbjct: 15 YTNEWKVK 22


>sp|RL22_PYRNV|LARGE ribosomal subunit protein uL22|Pyrobaculum neutrophilum (strain DSM

Query: 4 KWPIKL 9
KWP+K+
Sbjct: 98 KWPVKV 103


>sp|AATA_SULTO|A-TYPE ATP synthase subunit A|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 KWPIKL 9
KWP+++
Sbjct: 192 KWPVRI 197


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 NKWPIKL 9
N+W IKL
Sbjct: 649 NEWKIKL 655




15|SequenceR|80|71|VVAEGYLNKW

>sp|MTAD_PYRAB|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus abyssi (strain GE5 /

Query: 1 VVAEGYL 7
V+AEGYL
Sbjct: 353 VIAEGYL 359


>sp|FDHD_METJA|PROTEIN FdhD|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VAEGYLNK 9
++EG+LNK
Sbjct: 56 ISEGFLNK 63


>sp|RADA_DESAM|DNA repair and recombination protein|Desulfurococcus amylolyticus

Query: 3 AEGYLNKW 10
A GYL+ W
Sbjct: 34 AAGYLSAW 41


>sp|RADA_DESA1|DNA repair and recombination protein|Desulfurococcus amylolyticus

Query: 3 AEGYLNKW 10
A GYL+ W
Sbjct: 34 AAGYLSAW 41


>sp|THIL_METJA|THIAMINE-MONOPHOSPHATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 GYLNKW 10
GY++KW
Sbjct: 314 GYIHKW 319


>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 VAEGYLNKW 10
+ E Y NKW
Sbjct: 260 MGEDYKNKW 268


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 AEGYLNKW 10
AEGY+ +W
Sbjct: 995 AEGYVREW 1002


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VAEGYLNK 9
+AEGYL +
Sbjct: 962 IAEGYLKQ 969


>sp|AROA_ARCFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 1 VVAEGYLN 8
V AEGY N
Sbjct: 76 VEAEGYFN 83


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 VAEGYLNK 9
V EG+LNK
Sbjct: 259 VFEGFLNK 266


>sp|SYR_THEAC|ARGININE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 GYLNKW 10
GY+N W
Sbjct: 75 GYINVW 80


>sp|Y2041_ARCFU|UNCHARACTERIZED protein AF_2041|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VVAEGYLNKW 10
V GY+ KW
Sbjct: 97 VYKSGYMPKW 106


>sp|PIMT_IGNH4|PROTEIN-L-ISOASPARTATE O-methyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VVAEGYLNK 9
++AEGY+ +
Sbjct: 12 LIAEGYIKR 20




16|SequenceR|85|76|GELTAVVAEG

>sp|AATA_METS3|A-TYPE ATP synthase subunit A|Methanobrevibacter smithii (strain ATCC

Query: 1 GELTAVVAEG 10
GELT++ +EG
Sbjct: 157 GELTSIASEG 166


>sp|AATA_METS5|A-TYPE ATP synthase subunit A|Metallosphaera sedula (strain ATCC 51363

Query: 1 GELTAVVAEG 10
G+L VVAEG
Sbjct: 157 GKLKEVVAEG 166


>sp|Y2225_ARCFU|UNCHARACTERIZED protein AF_2225|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GELTAVVAE 9
GEL V+AE
Sbjct: 98 GELAVVIAE 106




17|SequenceR|90|81|VLLYLGELTA

>sp|AK_METJA|PROBABLE aspartokinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YLGELT 9
YLGELT
Sbjct: 113 YLGELT 118


>sp|ATGT_NANEQ|TRNA-GUANINE(15) transglycosylase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 LLYLGELT 9
+LY GELT
Sbjct: 353 ILYQGELT 360




18|SequenceR|95|86|SAGPVVLLYL

>sp|VORA_METTM|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter marburgensis

Query: 4 PVVLLY 9
PVVLLY
Sbjct: 97 PVVLLY 102




19|SequenceR|100|91|ADYKISAGPV

>sp|RFCS_NATPD|REPLICATION factor C small subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ADYKISAG 8
ADY+I+AG
Sbjct: 298 ADYRITAG 305


>sp|RNZ_THEON|RIBONUCLEASE Z|Thermococcus onnurineus (strain NA1)

Query: 1 ADYKISAGPV 10
A+Y +S GP+
Sbjct: 161 AEYGLSEGPI 170


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 YKISAGPV 10
Y+IS GPV
Sbjct: 426 YEISNGPV 433


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 YKISAGPV 10
Y+IS GP+
Sbjct: 423 YEISNGPI 430


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 3 YKISAGPV 10
Y+IS GP+
Sbjct: 421 YEISNGPI 428


>sp|CAS3_METTH|CRISPR-ASSOCIATED nuclease/helicase Cas3|Methanothermobacter thermautotrophicus

Query: 1 ADYKISAG 8
ADY SAG
Sbjct: 247 ADYSASAG 254




20|SequenceR|105|96|KEEKVADYKI

>sp|AROB_PYRFU|3-DEHYDROQUINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 EKVADYKI 10
EK++DYKI
Sbjct: 234 EKISDYKI 241


>sp|MCH_METVS|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus vannielii (strain ATCC 35089

Query: 2 EEKVADY 8
+EKVADY
Sbjct: 148 DEKVADY 154


>sp|Y1845_ARCFU|UNCHARACTERIZED protein AF_1845|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EEKVADYKI 10
+EK++DY+I
Sbjct: 77 KEKLSDYEI 85




21|SequenceR|110|101|VDQLSKEEKV

>sp|SIHH_METJA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VDQLSKEEK 9
+D+L+KE+K
Sbjct: 397 IDELTKEQK 405




22|SequenceR|115|106|LEKQKVDQLS

>sp|THS2_HALVD|CHAPERONIN subunit CTT2|Haloferax volcanii (strain ATCC 29605

Query: 3 KQKVDQL 9
KQKVDQ+
Sbjct: 280 KQKVDQI 286


>sp|DNLI_NANEQ|DNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LEKQKVDQL 9
+EKQKV++L
Sbjct: 74 IEKQKVEEL 82




23|SequenceR|120|111|EEIRSLEKQK

>sp|PFDB_METHJ|PREFOLDIN subunit beta|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 IRSLEKQ 9
IRS+EKQ
Sbjct: 86 IRSIEKQ 92




24|SequenceR|125|116|AKQLAEEIRS

>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 AKQLAEEIR 9
+K+LAEEIR
Sbjct: 501 SKELAEEIR 509


>sp|IF2P_HYPBU|PROBABLE translation initiation factor IF-2|Hyperthermus butylicus (strain

Query: 1 AKQLAEEIR 9
AKQLAE++R
Sbjct: 341 AKQLAEKVR 349


>sp|PYRF_METAC|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina acetivorans (strain ATCC

Query: 1 AKQLAEEIRS 10
A+Q+AEEI++
Sbjct: 206 ARQIAEEIQA 215


>sp|Y115_METJA|UNCHARACTERIZED protein MJ0115|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KQLAEEI 8
KQLAEEI
Sbjct: 101 KQLAEEI 107


>sp|THSA_SACSH|CHAPERONIN subunit alpha|Saccharolobus shibatae (strain ATCC 51178

Query: 1 AKQLAEEIRS 10
AK LAE +RS
Sbjct: 28 AKTLAEMLRS 37


>sp|HEM1_IGNH4|GLUTAMYL-TRNA reductase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 AKQLAEEI 8
AK+LAEE+
Sbjct: 224 AKELAEEV 231


>sp|THSA_SACS2|CHAPERONIN subunit alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 AKQLAEEIRS 10
AK LAE +RS
Sbjct: 28 AKTLAEMLRS 37


>sp|PANB_IGNH4|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 KQLAEEIRS 10
K+ AEE+RS
Sbjct: 245 KKFAEEVRS 253


>sp|SYT_ARCFU|THREONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AKQLAEEIRS 10
A++LAE +RS
Sbjct: 587 AEELAERVRS 596




25|SequenceR|130|121|TGKEAAKQLA

>sp|RTCA_PYRHO|RNA 3'-terminal phosphate cyclase|Pyrococcus horikoshii (strain ATCC

Query: 2 GKEAAKQL 9
GKEAA++L
Sbjct: 263 GKEAAQEL 270


>sp|PYRF_METAC|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina acetivorans (strain ATCC

Query: 3 KEAAKQLA 10
KEAA+Q+A
Sbjct: 203 KEAARQIA 210


>sp|RTCA_PYRAB|RNA 3'-terminal phosphate cyclase|Pyrococcus abyssi (strain GE5 /

Query: 1 TGKEAAKQL 9
GKEAA++L
Sbjct: 262 VGKEAAQEL 270


>sp|HEM1_SACS2|GLUTAMYL-TRNA reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GKEAAKQL 9
GK+AAK L
Sbjct: 94 GKDAAKHL 101




26|SequenceR|135|126|FEGSHTGKEA

>sp|RF1_HALLT|PEPTIDE chain release factor subunit|Halorubrum lacusprofundi (strain ATCC

Query: 1 FEGSHTGKEA 10
FE HTG+EA
Sbjct: 292 FENLHTGEEA 301


>sp|SURE_METM6|5'-NUCLEOTIDASE SurE|Methanococcus maripaludis (strain C6 /

Query: 1 FEGSHTGKEA 10
FEG+H G +A
Sbjct: 118 FEGAHHGAKA 127


>sp|SURE_METM5|5'-NUCLEOTIDASE SurE|Methanococcus maripaludis (strain C5 /

Query: 1 FEGSHTGKEA 10
FEG+H G +A
Sbjct: 118 FEGAHHGAKA 127


>sp|ARLY_METMJ|ARGININOSUCCINATE lyase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FEGSHTGKEA 10
FE H GKEA
Sbjct: 82 FEDVHAGKEA 91


>sp|SURE_METM7|5'-NUCLEOTIDASE SurE|Methanococcus maripaludis (strain C7 /

Query: 1 FEGSHTGKEA 10
FEG+H G +A
Sbjct: 118 FEGAHHGAKA 127


>sp|SURE_METVS|5'-NUCLEOTIDASE SurE|Methanococcus vannielii (strain ATCC 35089

Query: 1 FEGSHTGKEA 10
FEGSH G +A
Sbjct: 118 FEGSHHGAKA 127


>sp|AKSA_METMA|HOMOCITRATE synthase AksA|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GSHTGKEA 10
G HTGK+A
Sbjct: 335 GKHTGKKA 342


>sp|LEU1_METAC|PROBABLE 2-isopropylmalate synthase|Methanosarcina acetivorans (strain ATCC

Query: 3 GSHTGKEA 10
G HTGK A
Sbjct: 334 GKHTGKHA 341


>sp|LEU1_METMA|PROBABLE 2-isopropylmalate synthase|Methanosarcina mazei (strain ATCC

Query: 3 GSHTGKEA 10
G HTGK A
Sbjct: 334 GKHTGKHA 341


>sp|SURE_METMP|5'-NUCLEOTIDASE SurE|Methanococcus maripaludis (strain DSM 14266

Query: 1 FEGSHTGKEA 10
FEG+H G ++
Sbjct: 116 FEGAHHGAKS 125


>sp|TPIS_METS5|TRIOSEPHOSPHATE isomerase|Metallosphaera sedula (strain ATCC 51363

Query: 2 EGSHTG 7
EG+HTG
Sbjct: 69 EGAHTG 74


>sp|RNP1_PYRAB|RIBONUCLEASE P protein component 1|Pyrococcus abyssi (strain GE5 /

Query: 1 FEGSHTGK 8
F GSH G+
Sbjct: 30 FRGSHRGR 37


>sp|PCKG_THEVO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FEGSHTGK 8
F+G++TGK
Sbjct: 110 FKGAYTGK 117


>sp|RPO2C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo2C|Archaeoglobus fulgidus (strain ATCC

Query: 4 SHTGKE 9
SHTGKE
Sbjct: 448 SHTGKE 453


>sp|CYDE_METJA|L-CYSTEINE desulfidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EGSHTGK 8
+GSH+GK
Sbjct: 136 KGSHSGK 142


>sp|GATB_METTH|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanothermobacter thermautotrophicus

Query: 2 EGSHTGKEA 10
E H GKEA
Sbjct: 411 EDYHAGKEA 419


>sp|AKSA_METKA|HOMOCITRATE synthase AksA|Methanopyrus kandleri (strain AV19 /

Query: 3 GSHTGKEA 10
G HTG++A
Sbjct: 331 GKHTGRKA 338


>sp|ENDA_METAC|TRNA-SPLICING endonuclease|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GSHTGKEA 10
GSH GK A
Sbjct: 105 GSHPGKSA 112


>sp|TPIS_ARCFU|TRIOSEPHOSPHATE isomerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GSHTGK 8
GSHTG+
Sbjct: 71 GSHTGR 76


>sp|ENDA_METBF|TRNA-SPLICING endonuclease|Methanosarcina barkeri (strain Fusaro /

Query: 3 GSHTGKEA 10
GSH GK A
Sbjct: 105 GSHPGKSA 112


>sp|GGGPS_PYRAB|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 FEGSHTG 7
F GSH+G
Sbjct: 82 FPGSHSG 88


>sp|ENDA_METMA|TRNA-SPLICING endonuclease|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GSHTGKEA 10
GSH GK A
Sbjct: 108 GSHPGKSA 115




27|SequenceR|140|131|ELGYIFEGSH

>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 ELGYIFEGSH 10
E GYI+ G+H
Sbjct: 136 EKGYIYRGAH 145


>sp|Y2041_ARCFU|UNCHARACTERIZED protein AF_2041|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ELGYIFEGSH 10
+LGYIF G H
Sbjct: 80 DLGYIFFGIH 89


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ELGYIFEGSH 10
E GY+ +GSH
Sbjct: 169 EKGYVTKGSH 178


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ELGYIFEGSH 10
E+G+I +GSH
Sbjct: 178 EMGHITKGSH 187


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ELGYIFEGSH 10
E GYI +G+H
Sbjct: 172 EKGYIVKGTH 181


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 ELGYIFEGSH 10
E+G+I +GSH
Sbjct: 178 EMGHITKGSH 187


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 ELGYIFEGSH 10
E+G+I +GSH
Sbjct: 178 EMGHITKGSH 187


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 ELGYIFEGSH 10
+LGY+ +G+H
Sbjct: 223 DLGYVEKGTH 232


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ELGYIFEGSH 10
E GYI +G+H
Sbjct: 172 EKGYIVKGAH 181


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 ELGYIFEGSH 10
E GYI +G+H
Sbjct: 172 EKGYIVKGAH 181


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ELGYIFEGSH 10
ELG I +G+H
Sbjct: 165 ELGLIVKGTH 174


>sp|SURE_NATPD|5'-NUCLEOTIDASE SurE|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ELGYIFEGS 9
ELGY EG+
Sbjct: 55 ELGYAVEGT 63


>sp|SURE_HALMA|5'-NUCLEOTIDASE SurE|Haloarcula marismortui (strain ATCC 43049

Query: 1 ELGYIFEGS 9
ELGY EG+
Sbjct: 58 ELGYAVEGT 66


>sp|Y020_PYRFU|UPF0173 protein PF0020|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LGYIFEGS 9
LGY+ EGS
Sbjct: 111 LGYLIEGS 118


>sp|CRYD_NATPD|CRYPTOCHROME DASH|Natronomonas pharaonis (strain ATCC 35678

Query: 4 YIFEGSH 10
YI+EG H
Sbjct: 222 YIWEGDH 228


>sp|TRUA_METS3|TRNA pseudouridine synthase A|Methanobrevibacter smithii (strain ATCC

Query: 1 ELGYIFEGSH 10
E+ IF+G+H
Sbjct: 125 EVAEIFKGTH 134


>sp|RNP1_PYRAB|RIBONUCLEASE P protein component 1|Pyrococcus abyssi (strain GE5 /

Query: 4 YIFEGSH 10
+IF GSH
Sbjct: 28 WIFRGSH 34


>sp|AATC_ARCFU|A-TYPE ATP synthase subunit C|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ELGYIFEG 8
ELGY F G
Sbjct: 59 ELGYKFTG 66


>sp|SURE_METMJ|5'-NUCLEOTIDASE SurE|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 ELGYIFEGSH 10
EL IF+G H
Sbjct: 253 ELKAIFDGMH 262


>sp|MANB_METJA|PHOSPHOMANNOMUTASE jannaschii (strain ATCC 43067

Query: 1 ELGYIFEGS 9
ELG IF+G
Sbjct: 231 ELGLIFDGD 239


>sp|Y1542_METJA|UNCHARACTERIZED protein MJ1542|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ELGYIFEGS 9
ELGYI+ S
Sbjct: 720 ELGYIYLSS 728


>sp|SYC_PYRAB|CYSTEINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 ELGYIFEGS 9
E GY +EGS
Sbjct: 131 EKGYAYEGS 139


>sp|SYC_THEGJ|CYSTEINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 ELGYIFEGS 9
E GY +EGS
Sbjct: 131 EKGYAYEGS 139


>sp|SYC_THEKO|CYSTEINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ELGYIFEGS 9
E GY +EGS
Sbjct: 131 EKGYAYEGS 139


>sp|TMG10_METJA|TRNA (guanine(10)-N2)-dimethyltransferase|Methanocaldococcus

Query: 2 LGYIFEGSH 10
+GY+ G H
Sbjct: 2 IGYVLNGEH 10


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 4 YIFEGSH 10
Y+F+G+H
Sbjct: 337 YMFDGTH 343


>sp|Y578_METJA|UNCHARACTERIZED protein MJ0578|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ELGYIFEG 8
E GYI+EG
Sbjct: 122 ESGYIYEG 129


>sp|SYC_PYRHO|CYSTEINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ELGYIFEGS 9
E GY +EGS
Sbjct: 131 EKGYAYEGS 139


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ELGYIFEGSH 10
+LG I +GSH
Sbjct: 175 DLGLIKKGSH 184


>sp|RL22_CENSY|LARGE ribosomal subunit protein uL22|Cenarchaeum symbiosum (strain A)

Query: 1 ELGYIFEG 8
+ GY FEG
Sbjct: 3 DFGYSFEG 10


>sp|SYC_PYRFU|CYSTEINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ELGYIFEGS 9
E GY +EGS
Sbjct: 130 EKGYAYEGS 138




28|SequenceR|145|136|KYVFNELGYI

>sp|TRPD_THEVO|ANTHRANILATE phosphoribosyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 YVFNELGY 9
Y+ NELGY
Sbjct: 198 YILNELGY 205


>sp|LEUC_PICTO|3-ISOPROPYLMALATE dehydratase large subunit|Picrophilus torridus (strain ATCC

Query: 4 FNELGY 9
FNELGY
Sbjct: 44 FNELGY 49


>sp|SYE_METKA|GLUTAMATE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 KYVFNELGY 9
KYVF LG+
Sbjct: 308 KYVFEHLGW 316


>sp|HDRB_METKA|COB--COM heterodisulfide reductase subunit B|Methanopyrus kandleri (strain

Query: 1 KYVFNELGY 9
+ VF ELGY
Sbjct: 25 RLVFEELGY 33


>sp|CIMA_ARCFU|PUTATIVE (R)-citramalate synthase CimA|Archaeoglobus fulgidus (strain ATCC

Query: 3 VFNELGY 9
+ NELGY
Sbjct: 327 IMNELGY 333


>sp|CDC6Z_METTF|ORC1-TYPE DNA replication protein|Methanothermobacter thermautotrophicus

Query: 1 KYVFNEL 7
KYV NEL
Sbjct: 65 KYVINEL 71


>sp|CDC6V_METTF|ORC1-TYPE DNA replication protein|Methanothermobacter thermautotrophicus

Query: 1 KYVFNEL 7
KYV NEL
Sbjct: 65 KYVINEL 71


>sp|NADB_PYRHO|L-ASPARTATE oxidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YVFNELGYI 10
Y FNELG +
Sbjct: 377 YSFNELGDV 385


>sp|CDC63_SACS2|ORC1-TYPE DNA replication protein 3|Saccharolobus solfataricus (strain ATCC

Query: 1 KYVFNEL 7
KY+FNE+
Sbjct: 73 KYIFNEI 79


>sp|AGLR_HALVD|PROBABLE flippase AglR|Haloferax volcanii (strain ATCC 29605

Query: 2 YVFNELG 8
YV NELG
Sbjct: 28 YVINELG 34


>sp|Y1609_METJA|UNCHARACTERIZED ATP-binding protein MJ1609|Methanocaldococcus jannaschii (strain

Query: 1 KYVFNELGYI 10
KY N+L YI
Sbjct: 291 KYFLNDLDYI 300


>sp|LYSK_SULTO|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YVFNELGY 9
Y+ NE GY
Sbjct: 104 YILNEKGY 111


>sp|IF2B_METMP|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain DSM

Query: 1 KYVFNELG 8
KYV ELG
Sbjct: 63 KYVMKELG 70


>sp|IF2B_META3|TRANSLATION initiation factor 2 subunit|Methanococcus aeolicus (strain ATCC

Query: 1 KYVFNELG 8
KYV ELG
Sbjct: 64 KYVLKELG 71


>sp|IF2B_METM5|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C5

Query: 1 KYVFNELG 8
KYV ELG
Sbjct: 63 KYVMKELG 70


>sp|IF2B_METM7|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C7

Query: 1 KYVFNELG 8
KYV ELG
Sbjct: 63 KYVMKELG 70


>sp|IF2B_METM6|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C6

Query: 1 KYVFNELG 8
KYV ELG
Sbjct: 63 KYVMKELG 70


>sp|Y732_METJA|UNCHARACTERIZED protein MJ0732|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YVFNELGY 9
Y+FNEL Y
Sbjct: 55 YMFNELIY 62




29|SequenceR|150|141|GPKIDKYVFN

>sp|AMT1_METJA|AMMONIUM transporter Amt1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GPKIDKYV 8
GP+IDKY+
Sbjct: 173 GPRIDKYI 180


>sp|HJC_PYRFU|CROSSOVER junction endodeoxyribonuclease Hjc|Pyrococcus furiosus (strain ATCC

Query: 2 PKIDKYVF 9
PKI+K+VF
Sbjct: 94 PKIEKFVF 101


>sp|ENO_METTH|ENOLASE thermautotrophicus (strain ATCC 29096

Query: 2 PKIDKYVF 9
P+I+KYV+
Sbjct: 245 PEIEKYVY 252


>sp|NTPTH_THEPD|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Thermofilum pendens (strain DSM 2475

Query: 1 GPKIDKYV 8
GP++ KYV
Sbjct: 72 GPRVGKYV 79


>sp|DTDA_PICTO|D-AMINOACYL-TRNA deacylase|Picrophilus torridus (strain ATCC 700027

Query: 1 GPKIDKYVFN 10
PKI Y FN
Sbjct: 182 APKISDYFFN 191


>sp|CAS1_KORCO|CRISPR-ASSOCIATED endonuclease Cas1|Korarchaeum cryptofilum (strain OPF8)

Query: 2 PKIDKYVFN 10
P +D++VF+
Sbjct: 261 PMVDRFVFS 269


>sp|SAHH_THEVO|ADENOSYLHOMOCYSTEINASE volcanium (strain ATCC 51530

Query: 2 PKIDKYV 8
P+ID+YV
Sbjct: 374 PEIDRYV 380


>sp|PYRE_NATPD|OROTATE phosphoribosyltransferase|Natronomonas pharaonis (strain ATCC

Query: 4 IDKYVF 9
+DKYVF
Sbjct: 33 VDKYVF 38


>sp|NTPTH_METBF|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Methanosarcina barkeri (strain Fusaro /

Query: 1 GPKIDKYVFN 10
GP++ KY N
Sbjct: 70 GPRVGKYHVN 79


>sp|APGM_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GPKIDKYV 8
G KIDKY+
Sbjct: 167 GEKIDKYL 174


>sp|Y240_METJA|PUTATIVE adenylate cyclase MJ0240|Methanocaldococcus jannaschii (strain

Query: 1 GPKIDK 6
GPKIDK
Sbjct: 67 GPKIDK 72


>sp|Y1027_METJA|UNCHARACTERIZED protein MJ1027|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PKIDKYVFN 10
P +DK ++N
Sbjct: 282 PNLDKRIYN 290


>sp|TRPD_CALMQ|ANTHRANILATE phosphoribosyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 1 GPKIDKYV 8
G IDKYV
Sbjct: 239 GNSIDKYV 246


>sp|PYRE_METAR|OROTATE phosphoribosyltransferase|Methanocella arvoryzae (strain DSM

Query: 4 IDKYVF 9
+DKY+F
Sbjct: 32 VDKYIF 37


>sp|NTPTH_METAC|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GPKIDKYVFN 10
GP++ KY N
Sbjct: 70 GPRLGKYHVN 79


>sp|MTD_METST|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosphaera

Query: 2 PKIDKY 7
PKID+Y
Sbjct: 53 PKIDEY 58


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 1 GPKIDKYVFN 10
PKI K+V N
Sbjct: 258 APKIQKHVKN 267


>sp|YE1A_METJA|UNCHARACTERIZED protein MJ1417.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KIDKYVFN 10
KIDKY+ N
Sbjct: 61 KIDKYLEN 68


>sp|Y188_METJA|UNCHARACTERIZED protein MJ0188|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PKIDKYVF 9
PK+D YV
Sbjct: 210 PKLDAYVI 217


>sp|RTCB_NANEQ|TRNA-SPLICING ligase RtcB|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 KIDKYVFN 10
KIDKY++
Sbjct: 7 KIDKYIWE 14




30|SequenceR|155|146|KKRKRGPKID

>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 5 RGPKID 10
RGP+ID
Sbjct: 553 RGPRID 558


>sp|KHK_HALVD|KETOHEXOKINASE volcanii (strain ATCC 29605

Query: 3 RKRGPKI 9
RKRGP +
Sbjct: 222 RKRGPDV 228


>sp|UREG_HALWD|UREASE accessory protein UreG|Haloquadratum walsbyi (strain DSM 16790

Query: 3 RKRGPKI 9
RKRGP I
Sbjct: 138 RKRGPGI 144


>sp|Y941_METJA|TPR repeat-containing protein MJ0941|Methanocaldococcus jannaschii

Query: 3 RKRGPKID 10
RKR P++D
Sbjct: 18 RKRTPRVD 25


>sp|BUD32_PYRAB|KEOPS complex subunit Bud32|Pyrococcus abyssi (strain GE5 /

Query: 1 KKRKRGPKID 10
KKR R P+ID
Sbjct: 35 KKRYRIPEID 44


>sp|TRMI_PYRAB|TRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase

Query: 2 KRKRGPKI 9
K KRGP+I
Sbjct: 69 KMKRGPQI 76


>sp|Y987_METTH|UNCHARACTERIZED protein MTH_987|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 KRGPKID 10
+RGPK++
Sbjct: 187 RRGPKVE 193




31|SequenceR|160|151|FHKKHKKRKR

>sp|QUEC_METB6|7-CYANO-7-DEAZAGUANINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 FHKKHKK 7
+H+KHKK
Sbjct: 34 YHQKHKK 40


>sp|SYE_METB6|GLUTAMATE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 FHKKHKKRK 9
H+KH+K+K
Sbjct: 82 LHEKHEKKK 90


>sp|Y964_METJA|UNCHARACTERIZED protein MJ0964|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FHKKHK 6
FHKKH+
Sbjct: 571 FHKKHE 576


>sp|AATB_THEON|A-TYPE ATP synthase subunit B|Thermococcus onnurineus (strain NA1)

Query: 1 FHKKHKKRK 9
+H K++KR+
Sbjct: 456 YHPKYRKRE 464


>sp|Y781_METJA|UNCHARACTERIZED protein MJ0781|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FHKKHK 6
FH+KH+
Sbjct: 196 FHRKHQ 201




32|SequenceR|165|156|KFPKKFHKKH

>sp|FDHB_METJA|F420-DEPENDENT formate dehydrogenase subunit beta|Methanocaldococcus jannaschii

Query: 1 KFPKKFHKKH 10
K KKF KKH
Sbjct: 253 KLAKKFQKKH 262


>sp|AATB_METTP|A-TYPE ATP synthase subunit B|Methanothrix thermoacetophila (strain DSM

Query: 1 KFPKKFHKKH 10
KF KK+H K+
Sbjct: 447 KFIKKYHPKY 456


>sp|Y1470_METJA|UNCHARACTERIZED protein MJ1470|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KFPKKFHKK 9
KFP KF+ K
Sbjct: 67 KFPGKFYNK 75


Query: 1 KFPKKFHKKH 10
+F FHKK+
Sbjct: 402 RFHANFHKKY 411


>sp|Y1232_METJA|UNCHARACTERIZED protein MJ1232|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KFPKKFH 7
KFP+ FH
Sbjct: 289 KFPENFH 295


>sp|DHE2_HALSI|NAD-SPECIFIC glutamate dehydrogenase A|Halobacterium salinarum (Halobacterium

Query: 1 KFPKKFHK 8
K+PKK H+
Sbjct: 53 KYPKKVHE 60


>sp|PANB_SACS2|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 KFPKKFHKK 9
KFP+K H K
Sbjct: 255 KFPEKQHYK 263


>sp|PANB_SACI7|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 KFPKKFHKK 9
KFP+K H K
Sbjct: 255 KFPEKQHYK 263


>sp|PANB_SACI2|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 KFPKKFHKK 9
KFP+K H K
Sbjct: 255 KFPEKQHYK 263


>sp|PANB_SACI6|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KFPKKFHKK 9
KFP+K H K
Sbjct: 255 KFPEKQHYK 263


>sp|PANB_SACI4|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KFPKKFHKK 9
KFP+K H K
Sbjct: 255 KFPEKQHYK 263


>sp|PANB_SACI3|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 KFPKKFHKK 9
KFP+K H K
Sbjct: 255 KFPEKQHYK 263


>sp|PANB_SACI1|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 KFPKKFHKK 9
KFP+K H K
Sbjct: 255 KFPEKQHYK 263


>sp|ARGB_METTH|ACETYLGLUTAMATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 FPKKFHKK 9
+ KKFH+K
Sbjct: 13 YIKKFHRK 20


>sp|ARGB_METLZ|ACETYLGLUTAMATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 FPKKFHKK 9
+ +KFHKK
Sbjct: 14 YIRKFHKK 21


>sp|THIM_PYRHO|HYDROXYETHYLTHIAZOLE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KFPKKFHKK 9
K+P FH K
Sbjct: 233 KYPGSFHVK 241


>sp|THIM_PYRAB|HYDROXYETHYLTHIAZOLE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 KFPKKFHKK 9
K+P FH K
Sbjct: 233 KYPGSFHVK 241


>sp|Y964_METJA|UNCHARACTERIZED protein MJ0964|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 FHKKH 10
FHKKH
Sbjct: 571 FHKKH 575


>sp|ARGB_METS3|ACETYLGLUTAMATE kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 FPKKFHKK 9
+ KKFH+K
Sbjct: 13 YIKKFHEK 20


>sp|COFC_METLZ|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 KFPKKFHKKH 10
K P+KFH ++
Sbjct: 127 KKPEKFHVEY 136




33|SequenceR|170|161|SRDLGKFPKK

>sp|THII_THEVO|TRNA sulfurtransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SRDLGKFPKK 10
+RD+G FP+K
Sbjct: 319 ARDIGTFPEK 328


>sp|RS2_HALWD|SMALL ribosomal subunit protein uS2|Haloquadratum walsbyi (strain DSM

Query: 1 SRDLGKFPKK 10
SR G+FP K
Sbjct: 157 SRQYGRFPAK 166


>sp|CDC62_SULTO|ORC1-TYPE DNA replication protein 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SRDLGKFPKK 10
++DLG+ P+K
Sbjct: 348 AKDLGEIPRK 357


>sp|METE_PYRHO|METHIONINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RDLGKFPKK 10
RDLGK P++
Sbjct: 27 RDLGKIPEE 35


>sp|COBD_METTH|PROBABLE cobalamin biosynthesis protein CobD|Methanothermobacter

Query: 1 SRDLGKFPKK 10
+RD+G FP +
Sbjct: 180 NRDIGWFPAR 189


>sp|HMGCS_METKA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanopyrus kandleri (strain AV19 /

Query: 5 GKFPKK 10
GKFP+K
Sbjct: 243 GKFPRK 248


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 3 DLGKFPKK 10
+LGK P+K
Sbjct: 188 ELGKIPEK 195


>sp|GAL1_PYRFU|GALACTOKINASE furiosus (strain ATCC 43587

Query: 2 RDLGKFP 8
+DLGK P
Sbjct: 225 KDLGKLP 231


>sp|METE_PYRAB|METHIONINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 RDLGKFPKK 10
R+LGK P++
Sbjct: 27 RELGKIPEE 35


>sp|SYS_DESA1|SERINE--TRNA ligase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 SRDLGKFPK 9
SRD+ K P+
Sbjct: 58 SRDISKLPE 66


>sp|RFCL_METB6|REPLICATION factor C large subunit|Methanoregula boonei (strain DSM 21154

Query: 1 SRDLGKFPK 9
SRD+ +FP+
Sbjct: 245 SRDVDEFPE 253


>sp|METE_PYRFU|METHIONINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RDLGKFPKK 10
R+LGK P++
Sbjct: 27 RELGKIPEE 35




34|SequenceR|175|166|KPKDKSRDLG

>sp|CBIN_HALSA|COBALT transport protein CbiN|Halobacterium salinarum (strain ATCC

Query: 1 KPKDKSRDLG 10
+P+ +S+D+G
Sbjct: 83 RPRGQSQDMG 92


>sp|CBIN_HALS3|COBALT transport protein CbiN|Halobacterium salinarum (strain ATCC 29341

Query: 1 KPKDKSRDLG 10
+P+ +S+D+G
Sbjct: 83 RPRGQSQDMG 92


>sp|ATGT_METS3|TRNA-GUANINE(15) transglycosylase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 PKDKSRDL 9
PK+K RDL
Sbjct: 290 PKEKRRDL 297




35|SequenceR|180|171|DKKAEKPKDK

>sp|YB50_METTW|IRON-SULFUR cluster assembly SufBD family|Methanothermobacter

Query: 2 KKAEKPKDK 10
KKAEK +DK
Sbjct: 7 KKAEKARDK 15


>sp|RFCL_METTP|REPLICATION factor C large subunit|Methanothrix thermoacetophila (strain DSM

Query: 1 DKKAEKPKDK 10
D++ EKP+DK
Sbjct: 435 DREIEKPEDK 444




36|SequenceR|185|176|KEVFTDKKAE

>sp|ECFA_METST|ENERGY-COUPLING factor transporter ATP-binding protein|Methanosphaera stadtmanae

Query: 1 KEVFTDKK 8
KE+FTDK+
Sbjct: 225 KEIFTDKE 232


>sp|THIC1_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KEVFTDKKAE 10
KE F +KKAE
Sbjct: 418 KEAFGEKKAE 427


>sp|PSTB_PYRAE|PHOSPHATE import ATP-binding protein PstB|Pyrobaculum aerophilum (strain ATCC

Query: 1 KEVFTDKKAE 10
KEVFT+ + E
Sbjct: 230 KEVFTNPRHE 239


>sp|Y2270_ARCFU|UNCHARACTERIZED protein AF_2270|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EVFTDKKA 9
E+F+DKK+
Sbjct: 32 EIFSDKKS 39


>sp|SEPS_METAC|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KEVFTDKKAE 10
K+VF DK E
Sbjct: 368 KQVFVDKTPE 377


>sp|HIS6_METTH|IMIDAZOLE glycerol phosphate synthase subunit|Methanothermobacter

Query: 2 EVFTDKKAE 10
E FTD KA+
Sbjct: 235 EAFTDGKAD 243




37|SequenceR|190|181|VQTALKEVFT

>sp|PORC_THEKO|PYRUVATE/KETOISOVALERATE oxidoreductases common subunit gamma|Thermococcus kodakarensis

Query: 1 VQTALKEVFT 10
VQ A+KE F+
Sbjct: 153 VQEAIKETFS 162


>sp|RPO3_PYRIL|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VQTALKEVF 9
V+TAL+E F
Sbjct: 228 VETALREAF 236


>sp|RPO3_PYRNV|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum neutrophilum (strain DSM

Query: 1 VQTALKEVF 9
V TAL+E F
Sbjct: 228 VDTALREAF 236


>sp|PORC_PYRAB|PYRUVATE/KETOISOVALERATE oxidoreductases common subunit gamma|Pyrococcus abyssi (strain GE5

Query: 1 VQTALKEVFT 10
V+TA+K+ F+
Sbjct: 153 VETAIKDTFS 162




38|SequenceR|195|186|QVNKIVQTAL

>sp|KAD_HALSA|ADENYLATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 VNKIVQTAL 10
VN+IV+TAL
Sbjct: 71 VNEIVKTAL 79


>sp|KAD_HALS3|ADENYLATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 2 VNKIVQTAL 10
VN+IV+TAL
Sbjct: 71 VNEIVKTAL 79


>sp|COFD_HALMA|2-PHOSPHO-L-LACTATE transferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 QVNKIVQTAL 10
+VN+ V+TAL
Sbjct: 317 RVNRAVETAL 326


>sp|KAD_NATPD|ADENYLATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VNKIVQTAL 10
VN+IVQ A+
Sbjct: 66 VNEIVQAAI 74




39|SequenceR|200|191|DTIKVQVNKI

>sp|MVHD_METTH|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Methanothermobacter

Query: 1 DTIKVQVNKI 10
+T+K+ VN+I
Sbjct: 117 ETVKMMVNRI 126


>sp|Y1497_METJA|UNCHARACTERIZED metallohydrolase MJ1497|Methanocaldococcus jannaschii (strain

Query: 1 DTIKVQVN 8
DT+K+Q N
Sbjct: 67 DTVKIQSN 74




40|SequenceR|205|196|YKIHIDTIKV

>sp|PGP_METMA|PHOSPHOGLYCOLATE phosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YKIHIDTIKV 10
Y IHI +IK+
Sbjct: 139 YAIHIKSIKI 148


>sp|PGK_THEAC|PHOSPHOGLYCERATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YKIHIDTIK 9
++ HIDTI+
Sbjct: 40 FRAHIDTIR 48


>sp|AATA_ARCFU|A-TYPE ATP synthase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YKIHIDTIK 9
Y +++DT+K
Sbjct: 434 YSLYVDTLK 442


>sp|PYRB_PYRIL|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum islandicum

Query: 1 YKIHIDTIK 9
YKI +DT+K
Sbjct: 245 YKITLDTLK 253


>sp|Y1497_METJA|UNCHARACTERIZED metallohydrolase MJ1497|Methanocaldococcus jannaschii (strain

Query: 4 HIDTIKV 10
HIDT+K+
Sbjct: 65 HIDTVKI 71


>sp|PYRB_STAMF|ASPARTATE carbamoyltransferase catalytic subunit|Staphylothermus marinus

Query: 1 YKIHIDTIK 9
Y+I IDT++
Sbjct: 249 YRISIDTLR 257


>sp|Y418_METJA|UNCHARACTERIZED protein MJ0418|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KIHIDTIK 9
KIH++T+K
Sbjct: 207 KIHLNTLK 214




41|SequenceR|210|201|TVDDEYKIHI

>sp|FSX1_HALS0|FUSEXIN 1|Haloferax sp. (strain Q22)

Query: 2 VDDEYKIH 9
VDDEY +H
Sbjct: 238 VDDEYALH 245


>sp|Y231_METTH|UNCHARACTERIZED methyltransferase MTH_231|Methanothermobacter thermautotrophicus

Query: 1 TVDDEYKIHI 10
TVDD +KI +
Sbjct: 97 TVDDRFKIAV 106


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 TVDDEYKI 8
TVDD Y+I
Sbjct: 2839 TVDDPYEI 2846


>sp|FSX1_HALSH|FUSEXIN 1|Haloplanus natans (strain DSM 17983

Query: 2 VDDEYKIH 9
VDDE IH
Sbjct: 239 VDDELAIH 246


>sp|MFNA_ARCFU|PROBABLE L-aspartate decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VDDEYKIHI 10
VD+EYK+ +
Sbjct: 129 VDEEYKVDV 137


>sp|QUEC_METTH|7-CYANO-7-DEAZAGUANINE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 DEYKIH 9
DEY+IH
Sbjct: 22 DEYEIH 27


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 DDEYKIHI 10
D+E+K++I
Sbjct: 406 DEEFKVYI 413


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 DDEYKIHI 10
D+E+K++I
Sbjct: 406 DEEFKVYI 413


>sp|PURA_METBU|ADENYLOSUCCINATE synthetase|Methanococcoides burtonii (strain DSM 6242

Query: 3 DDEYKIHI 10
DD YK+H+
Sbjct: 46 DDVYKLHL 53


>sp|AATF_METST|A-TYPE ATP synthase subunit F|Methanosphaera stadtmanae (strain ATCC

Query: 2 VDDEYKIHI 10
VDDEY I I
Sbjct: 42 VDDEYSIII 50


>sp|IF6_SACI6|TRANSLATION initiation factor 6|Saccharolobus islandicus (strain M.16.4 /

Query: 1 TVDDEYK 7
T+DDE++
Sbjct: 75 TIDDEFR 81


>sp|IF6_SACI4|TRANSLATION initiation factor 6|Saccharolobus islandicus (strain M.14.25 /

Query: 1 TVDDEYK 7
T+DDE++
Sbjct: 75 TIDDEFR 81


>sp|IF6_SACI3|TRANSLATION initiation factor 6|Saccharolobus islandicus (strain M.16.27)

Query: 1 TVDDEYK 7
T+DDE++
Sbjct: 75 TIDDEFR 81


>sp|IF6_SACS2|TRANSLATION initiation factor 6|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TVDDEYK 7
T+DDE++
Sbjct: 75 TIDDEFR 81


>sp|IF6_SACI7|TRANSLATION initiation factor 6|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 TVDDEYK 7
T+DDE++
Sbjct: 75 TIDDEFR 81


>sp|IF6_SACI2|TRANSLATION initiation factor 6|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 TVDDEYK 7
T+DDE++
Sbjct: 75 TIDDEFR 81


>sp|IF6_SACI1|TRANSLATION initiation factor 6|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 TVDDEYK 7
T+DDE++
Sbjct: 75 TIDDEFR 81


>sp|TRPE3_HALMA|ANTHRANILATE synthase component 1 3|Haloarcula marismortui (strain ATCC 43049

Query: 3 DDEYKIHI 10
DDEY++ +
Sbjct: 445 DDEYRLRV 452




42|SequenceR|215|206|PRKPDTVDDE

>sp|CCA_ARCFU|CCA-ADDING enzyme|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RKPDTVDD 9
RKPD VDD
Sbjct: 284 RKPDIVDD 291


>sp|NNR_THEPD|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Thermofilum pendens (strain DSM

Query: 1 PRKPDT 6
PR+PDT
Sbjct: 234 PRRPDT 239


>sp|UBIX_PYRAB|FLAVIN prenyltransferase UbiX|Pyrococcus abyssi (strain GE5 /

Query: 3 KPDTVDD 9
KP T+DD
Sbjct: 146 KPGTIDD 152


>sp|UBIX_PYRHO|FLAVIN prenyltransferase UbiX|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KPDTVDD 9
KP T+DD
Sbjct: 146 KPKTIDD 152


>sp|IF6_META3|TRANSLATION initiation factor 6|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 PDTVDDE 10
PDT D+E
Sbjct: 163 PDTTDEE 169


>sp|KAE1_METBU|TRNA N6-adenosine threonylcarbamoyltransferase|Methanococcoides burtonii

Query: 3 KPDTVD 8
+PDTVD
Sbjct: 319 RPDTVD 324


>sp|CDC6H_HALMA|ORC1-TYPE DNA replication protein 8|Haloarcula marismortui (strain ATCC 43049

Query: 4 PDTVDDE 10
PDT DDE
Sbjct: 428 PDTTDDE 434


>sp|TOP6A_HALSA|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 700922

Query: 1 PRKPDTVD 8
P PDT+D
Sbjct: 179 PNNPDTID 186


>sp|TOP6A_HALS3|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 29341

Query: 1 PRKPDTVD 8
P PDT+D
Sbjct: 179 PNNPDTID 186


>sp|FLAH_SULAC|ARCHAEAL flagellar ATP-binding protein FlaH|Sulfolobus acidocaldarius

Query: 4 PDTVDDE 10
PDT D+E
Sbjct: 159 PDTFDEE 165


>sp|RL13_PYRIL|LARGE ribosomal subunit protein uL13|Pyrobaculum islandicum (strain DSM

Query: 1 PRKPDTV 7
PR+PD V
Sbjct: 87 PRRPDRV 93




43|SequenceR|220|211|VGFSLPRKPD

>sp|Y924_ARCFU|UNCHARACTERIZED protein AF_0924|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 SLPRKPD 10
SLP KPD
Sbjct: 183 SLPEKPD 189


>sp|KPRS_AERPE|RIBOSE-PHOSPHATE pyrophosphokinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GFSLPRKP 9
G +LPRKP
Sbjct: 278 GNTLPRKP 285


>sp|PYRK_METBU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanococcoides

Query: 2 GFSLPRKPD 10
GF+LP+K +
Sbjct: 86 GFTLPKKDE 94


>sp|RL13_PYRIL|LARGE ribosomal subunit protein uL13|Pyrobaculum islandicum (strain DSM

Query: 2 GFSLPRKPD 10
G +PR+PD
Sbjct: 83 GPKIPRRPD 91


>sp|RL13_PYRAE|LARGE ribosomal subunit protein uL13|Pyrobaculum aerophilum (strain

Query: 2 GFSLPRKPD 10
G +PR+PD
Sbjct: 85 GPKVPRRPD 93


>sp|RL13_PYRNV|LARGE ribosomal subunit protein uL13|Pyrobaculum neutrophilum (strain

Query: 2 GFSLPRKPD 10
G +PR+PD
Sbjct: 83 GPKIPRRPD 91


>sp|RL32_SACS2|LARGE ribosomal subunit protein eL32|Saccharolobus solfataricus (strain

Query: 1 VGFSLPRK 8
VG+ LP+K
Sbjct: 67 VGYRLPKK 74




44|SequenceR|225|216|LEGLTVGFSL

>sp|SIHH_METKA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanopyrus kandleri (strain AV19 /

Query: 1 LEGLTVGFSL 10
LEG+TVG +L
Sbjct: 47 LEGITVGMTL 56


>sp|SAHH_ARCFU|ADENOSYLHOMOCYSTEINASE fulgidus (strain ATCC 49558

Query: 1 LEGLTVGFSL 10
LEG TVG +L
Sbjct: 30 LEGFTVGMAL 39


>sp|PYRB_METS5|ASPARTATE carbamoyltransferase catalytic subunit|Metallosphaera sedula

Query: 1 LEGLTVGF 8
LEGLT GF
Sbjct: 145 LEGLTFGF 152


>sp|TRUD_METTH|PROBABLE tRNA pseudouridine synthase D|Methanothermobacter

Query: 2 EGLTVGFSL 10
EGLTV FS+
Sbjct: 388 EGLTVEFSI 396


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 3 GLTVGFSL 10
GLT+GFS+
Sbjct: 516 GLTLGFSI 523


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GLTVGFSL 10
GLT+GFS+
Sbjct: 516 GLTLGFSI 523


>sp|SIHH_METMP|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LEGLTVGFSL 10
EGLT+G +L
Sbjct: 40 FEGLTIGMAL 49


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 EGLTVGFSL 10
EG+T GF+L
Sbjct: 1157 EGVTRGFTL 1165


>sp|Y325_METJA|UNCHARACTERIZED protein MJ0325|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LEGLTVGF 8
+EGLTVG
Sbjct: 1 MEGLTVGL 8


>sp|MCRB_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 1 LEGLTVGFSL 10
+EG VGFS
Sbjct: 352 VEGTAVGFSF 361


>sp|MCRB_METTH|METHYL-COENZYME M reductase I subunit|Methanothermobacter thermautotrophicus

Query: 1 LEGLTVGFSL 10
+EG VGFS
Sbjct: 352 VEGTAVGFSF 361


>sp|MTRA_METST|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosphaera stadtmanae (strain

Query: 1 LEGLTVGFSL 10
+EG+ +GF L
Sbjct: 228 IEGIVIGFIL 237


>sp|MOAC_THEVO|PROBABLE cyclic pyranopterin monophosphate synthase|Thermoplasma volcanium

Query: 1 LEGLTVGFSL 10
+EG+ V FSL
Sbjct: 74 IEGVDVDFSL 83


>sp|MCRB_METBF|METHYL-COENZYME M reductase subunit beta|Methanosarcina barkeri (strain Fusaro /

Query: 1 LEGLTVGFSL 10
+EG VGFS
Sbjct: 350 VEGTAVGFSF 359


>sp|G1PDH_AERPE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Aeropyrum pernix (strain ATCC 700893

Query: 2 EGLTVGFSL 10
EGLTVG +
Sbjct: 61 EGLTVGLKI 69


>sp|BACH_HALHP|HALORHODOPSIN halobium (strain port)

Query: 2 EGLTVGF 8
GLTVGF
Sbjct: 82 SGLTVGF 88


>sp|BACH_HALHS|HALORHODOPSIN halobium (strain shark)

Query: 2 EGLTVGF 8
GLTVGF
Sbjct: 82 SGLTVGF 88


>sp|BACH_HALHM|HALORHODOPSIN halobium (strain mex)

Query: 1 LEGLTVGF 8
+ GLTVGF
Sbjct: 45 VSGLTVGF 52


>sp|BACH_HALMA|HALORHODOPSIN marismortui (strain ATCC 43049

Query: 2 EGLTVGF 8
GLTVGF
Sbjct: 82 SGLTVGF 88


>sp|BACH_HALVA|CRUXHALORHODOPSIN-3 vallismortis (Halobacterium vallismortis)

Query: 2 EGLTVGF 8
GLTVGF
Sbjct: 82 SGLTVGF 88




45|SequenceR|230|221|ATLLSLEGLT

>sp|TF2B_SULAC|TRANSCRIPTION initiation factor IIB|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ATLLSLEGLT 10
TLLSL G+T
Sbjct: 223 GTLLSLSGIT 232


>sp|OGT_PYRHO|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 LSLEGLT 10
LSLEGLT
Sbjct: 85 LSLEGLT 91


>sp|OGT_PYRSN|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrococcus sp. (strain NA2)

Query: 4 LSLEGLT 10
LSLEGLT
Sbjct: 86 LSLEGLT 92


>sp|OGT_PYRAB|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 4 LSLEGLT 10
LSLEGLT
Sbjct: 85 LSLEGLT 91


>sp|Y2601_AERPE|UNCHARACTERIZED protein APE_2601.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 ATLLSLEGL 9
ATL+S EGL
Sbjct: 182 ATLISAEGL 190


>sp|PPS_METHJ|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 LLSLEGLT 10
++SLEGLT
Sbjct: 26 IVSLEGLT 33




46|SequenceR|235|226|TWHENATLLS

>sp|METXA_METRM|HOMOSERINE O-acetyltransferase|Methanobrevibacter ruminantium (strain ATCC

Query: 2 WHENAT 7
WH+NAT
Sbjct: 64 WHKNAT 69


>sp|AATA_AERPE|A-TYPE ATP synthase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 2 WHEN 5
WHEN
Sbjct: 454 WHEN 457




47|SequenceR|240|231|NLICPTWHEN

>sp|AMT2_HALMT|AMMONIUM transporter Amt2|Haloferax mediterranei (strain ATCC 33500

Query: 5 PTWHE 9
P WHE
Sbjct: 360 PVWHE 364


>sp|RPO11_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo11|Thermococcus kodakarensis (strain

Query: 1 NLICPTWHEN 10
NL+ T HEN
Sbjct: 26 NLLTETLHEN 35


>sp|RPO11_THESM|DNA-DIRECTED RNA polymerase subunit Rpo11|Thermococcus sibiricus (strain DSM

Query: 1 NLICPTWHEN 10
NL+ T HEN
Sbjct: 26 NLLSETLHEN 35


>sp|RL22_STAMF|LARGE ribosomal subunit protein uL22|Staphylothermus marinus (strain

Query: 5 PTWH 8
PTWH
Sbjct: 2 PTWH 5


>sp|RL22_IGNH4|LARGE ribosomal subunit protein uL22|Ignicoccus hospitalis (strain

Query: 5 PTWH 8
PTWH
Sbjct: 2 PTWH 5


>sp|RL22_HYPBU|LARGE ribosomal subunit protein uL22|Hyperthermus butylicus (strain

Query: 5 PTWH 8
PTWH
Sbjct: 2 PTWH 5


>sp|TFE_PYRIL|TRANSCRIPTION factor E|Pyrobaculum islandicum (strain DSM 4184

Query: 3 ICPTWH 8
ICPT H
Sbjct: 121 ICPTCH 126


>sp|HYPB_METJA|PROBABLE hydrogenase maturation factor HypB|Methanocaldococcus jannaschii

Query: 1 NLICP 5
NLICP
Sbjct: 124 NLICP 128


>sp|COFD_METBF|2-PHOSPHO-L-LACTATE transferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NLICP 5
NLICP
Sbjct: 41 NLICP 45


>sp|Y1718_ARCFU|UNCHARACTERIZED protein AF_1718|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LICPTWHE 9
L+CP HE
Sbjct: 43 LMCPYTHE 50


>sp|HDLB_ARCPA|HETERODISULFIDE reductase subunit B-like protein|Archaeoglobus profundus (strain

Query: 4 CPTW 7
CPTW
Sbjct: 43 CPTW 46


>sp|DHYS1_ARCFU|PROBABLE deoxyhypusine synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LICPTWHEN 10
+ CPT H++
Sbjct: 174 VFCPTLHDS 182


>sp|PUR8_PYRHO|ADENYLOSUCCINATE lyase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 PTWHE 9
P WHE
Sbjct: 307 PLWHE 311


>sp|PUR8_PYRAB|ADENYLOSUCCINATE lyase|Pyrococcus abyssi (strain GE5 /

Query: 5 PTWHE 9
P WHE
Sbjct: 307 PLWHE 311


>sp|PUR8_METTH|ADENYLOSUCCINATE lyase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 PTWHE 9
P WHE
Sbjct: 309 PLWHE 313


>sp|ACDE_METTH|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanothermobacter

Query: 3 ICPTWHEN 10
IC T+H N
Sbjct: 143 ICKTFHSN 150


>sp|FLAB2_ARCFU|PROBABLE flagellin 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 CPTWHEN 10
CP W+++
Sbjct: 135 CPWWYDD 141


>sp|TFE_PYRNV|TRANSCRIPTION factor E|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 ICPTWH 8
+CPT H
Sbjct: 121 VCPTCH 126


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 1 NLICPTWHEN 10
N + PT++EN
Sbjct: 646 NEVIPTYYEN 655


>sp|RFCS_METAR|REPLICATION factor C small subunit|Methanocella arvoryzae (strain DSM 22066

Query: 6 TWHEN 10
TWH N
Sbjct: 66 TWHSN 70


>sp|Y1008_ARCFU|UNCHARACTERIZED protein AF_1008|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ICPTWHEN 10
+ PTW E+
Sbjct: 75 VLPTWFES 82




48|SequenceR|245|236|IKDAENLICP

>sp|REG2_PYRHO|UNCHARACTERIZED HTH-type transcriptional regulator PH0061|Pyrococcus horikoshii

Query: 1 IKDAENLIC 9
IKDAENLI
Sbjct: 114 IKDAENLIS 122


>sp|RBL_ARCFU|RIBULOSE bisphosphate carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IKDAENLICP 10
IKD ENL P
Sbjct: 185 IKDDENLTSP 194


>sp|COFC_METKA|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 IKDAENLICP 10
+KDA+ ++CP
Sbjct: 102 LKDADVVLCP 111


>sp|DPO4_METAC|DNA polymerase IV|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IKDAENLIC 9
IK+ ENL C
Sbjct: 142 IKEKENLTC 150


>sp|DPO41_METMA|DNA polymerase IV 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IKDAENLIC 9
IK+ ENL C
Sbjct: 141 IKEKENLTC 149


>sp|BGAL_HALLT|BETA-GALACTOSIDASE Bga|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 IKDAENLICP 10
+KDAEN + P
Sbjct: 490 VKDAENKLRP 499


>sp|GATD_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus vannielii (strain ATCC

Query: 1 IKDAENLIC 9
+KDA+ LIC
Sbjct: 403 LKDAKKLIC 411


>sp|TRPF_META3|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 KDAENLI 8
KDAENLI
Sbjct: 113 KDAENLI 119


>sp|Y2298_ARCFU|UNCHARACTERIZED DNA primase small subunit-like|Archaeoglobus fulgidus (strain ATCC

Query: 3 DAENLICP 10
D EN+ CP
Sbjct: 129 DPENVSCP 136


>sp|RBL_THEON|RIBULOSE bisphosphate carboxylase|Thermococcus onnurineus (strain NA1)

Query: 1 IKDAENLICP 10
+KD ENL P
Sbjct: 188 MKDDENLTSP 197


>sp|RBL_THEKO|RIBULOSE bisphosphate carboxylase|Thermococcus kodakarensis (strain ATCC

Query: 1 IKDAENLICP 10
+KD ENL P
Sbjct: 188 MKDDENLTSP 197


>sp|Y198_METJA|UNCHARACTERIZED protein MJ0198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IKDAENLICP 10
I D EN+I P
Sbjct: 46 IADVENVIAP 55


>sp|T2M2_AERPE|PUTATIVE type II restriction enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 IKDAENLICP 10
++DA NL+ P
Sbjct: 67 LRDAVNLLSP 76


>sp|RS2_METST|SMALL ribosomal subunit protein uS2|Methanosphaera stadtmanae (strain

Query: 3 DAENLIC 9
D ENL+C
Sbjct: 141 DTENLLC 147


>sp|RIBB_METMA|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KDAENLIC 9
KDA LIC
Sbjct: 61 KDAGGLIC 68


>sp|RIBB_METAC|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanosarcina acetivorans (strain ATCC

Query: 2 KDAENLIC 9
KDA LIC
Sbjct: 61 KDAGGLIC 68


>sp|BSUHB_ARCFU|FRUCTOSE-1,6-BISPHOSPHATASE/INOSITOL-1-MONOPHOSPHATASE fulgidus (strain ATCC 49558

Query: 1 IKDAENLIC 9
+ DAE L C
Sbjct: 142 VSDAEELYC 150




49|SequenceR|250|241|ILKYIIKDAE

>sp|OTC_METVS|ORNITHINE carbamoyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ILKYIIKD 8
+LKY++KD
Sbjct: 297 VLKYVLKD 304


>sp|DHYS_SACI7|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 ILKYIIKDAE 10
ILK +IKDA+
Sbjct: 47 ILKEMIKDAD 56


>sp|DHYS_SACI4|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 ILKYIIKDAE 10
ILK +IKDA+
Sbjct: 47 ILKEMIKDAD 56


>sp|DHYS_SACI3|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.16.27)

Query: 1 ILKYIIKDAE 10
ILK +IKDA+
Sbjct: 47 ILKEMIKDAD 56


>sp|DHYS_SACI2|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 ILKYIIKDAE 10
ILK +IKDA+
Sbjct: 47 ILKEMIKDAD 56


>sp|DHYS_SACI1|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 ILKYIIKDAE 10
ILK +IKDA+
Sbjct: 47 ILKEMIKDAD 56


>sp|OTC_SACS2|ORNITHINE carbamoyltransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ILKYIIKDA 9
++KY +KDA
Sbjct: 254 LMKYAVKDA 262


>sp|DHYS_SACI6|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 ILKYIIKDAE 10
ILK +IKDA+
Sbjct: 47 ILKEMIKDAD 56


>sp|PCNA2_THEKO|DNA polymerase sliding clamp 2|Thermococcus kodakarensis (strain ATCC

Query: 1 ILKYIIKDA 9
+LKY+++DA
Sbjct: 229 LLKYMVRDA 237


>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ILKYIIKDA 9
I+KY++++A
Sbjct: 5 IMKYVVQNA 13


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILKYIIKD 8
+LKY +KD
Sbjct: 205 VLKYFLKD 212


>sp|MCRB_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LKYIIKDA 9
LKY+IK A
Sbjct: 433 LKYVIKGA 440


>sp|RLMH_METM7|PUTATIVE ribosomal RNA large subunit|Methanococcus maripaludis (strain C7

Query: 1 ILKYIIKDA 9
ILKY+ KD+
Sbjct: 63 ILKYLKKDS 71




50|SequenceR|255|246|LSDLRILKYI

>sp|ABLA_METMP|L-LYSINE 2,3-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LSDLRILKY 9
LSD ILKY
Sbjct: 4 LSDESILKY 12


>sp|CDVB3_SULAC|CELL division protein B3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LSDLRILKY 9
L+D+R+ KY
Sbjct: 10 LTDIRMAKY 18




51|SequenceR|260|251|NWYASLSDLR

>sp|TRPB2_METMA|TRYPTOPHAN synthase beta chain 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 WYASLSDL 9
WY LSDL
Sbjct: 27 WYNVLSDL 34


>sp|SEPS_METTP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 WYASLSDL 9
W+ SLS+L
Sbjct: 194 WFISLSNL 201


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WYASLSDLR 10
WY + D+R
Sbjct: 543 WYIEIPDVR 551


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 WYASLSDLR 10
WY + D+R
Sbjct: 546 WYIEIPDVR 554


>sp|QUEE_THEKO|7-CARBOXY-7-DEAZAGUANINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 WYASL 6
WYASL
Sbjct: 198 WYASL 202




52|SequenceR|265|256|MSCNVNWYAS

>sp|QUEE_THEKO|7-CARBOXY-7-DEAZAGUANINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 NVNWYAS 10
NV WYAS
Sbjct: 195 NVQWYAS 201


>sp|F16PA_HALSA|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Halobacterium salinarum (strain ATCC 700922

Query: 5 VNWYAS 10
VNWYAS
Sbjct: 61 VNWYAS 66


>sp|F16PA_HALS3|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Halobacterium salinarum (strain ATCC 29341

Query: 5 VNWYAS 10
VNWYAS
Sbjct: 61 VNWYAS 66


>sp|COXX_HALSA|PROTOHEME IX farnesyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 SCNVNWYA 9
SCN W+A
Sbjct: 27 SCNGQWFA 34


>sp|Y521_ARCFU|UNCHARACTERIZED N-acetyltransferase AF_0521|Archaeoglobus fulgidus (strain ATCC

Query: 1 MSCNVNWYA 9
++C+ NW++
Sbjct: 64 VACDTNWFS 72


>sp|COXX_HALS3|PROTOHEME IX farnesyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 2 SCNVNWYA 9
SCN W+A
Sbjct: 44 SCNGQWFA 51


>sp|Y441_METJA|PROBABLE membrane transporter protein MJ0441|Methanocaldococcus jannaschii

Query: 4 NVNWYAS 10
N+NW AS
Sbjct: 82 NINWKAS 88


>sp|CBIM1_METBF|PUTATIVE cobalt transport protein CbiM|Methanosarcina barkeri (strain Fusaro

Query: 1 MSCNVNWYAS 10
M NVN+Y S
Sbjct: 131 MRLNVNFYVS 140


>sp|APGM_THEAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermoplasma acidophilum (strain ATCC

Query: 4 NVNWYAS 10
N+NW AS
Sbjct: 34 NLNWLAS 40


>sp|FPOC_METMA|F(420)H(2) dehydrogenase subunit C|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 NVNWY 8
N NWY
Sbjct: 105 NANWY 109


>sp|GLMS_METMA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina mazei (strain ATCC

Query: 1 MSCNVNWYA 9
++C +W+A
Sbjct: 308 LACGTSWHA 316


>sp|GLMS_METAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina acetivorans (strain

Query: 1 MSCNVNWYA 9
++C +W+A
Sbjct: 308 LACGTSWHA 316


>sp|Y2160_ARCFU|UNCHARACTERIZED protein AF_2160|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SCNVNWYA 9
SC+V W A
Sbjct: 4 SCSVGWGA 11




53|SequenceR|270|261|SRQYSMSCNV

>sp|PUR2_METAR|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 QYSMSCNV 10
QY+ CNV
Sbjct: 59 QYAQDCNV 66




54|SequenceR|275|266|LIQERSRQYS

>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LIQERSRQYS 10
+IQE QYS
Sbjct: 1 MIQEEKEQYS 10


>sp|GATE_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Archaeoglobus fulgidus (strain ATCC

Query: 1 LIQERSRQY 9
LI+ER+R+Y
Sbjct: 444 LIEERARRY 452


>sp|MUTS_METTP|DNA mismatch repair protein MutS|Methanothrix thermoacetophila (strain

Query: 1 LIQERSRQY 9
L+QERS Y
Sbjct: 120 LLQERSNNY 128


>sp|ATGT_KORCO|TRNA-GUANINE(15) transglycosylase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LIQERSR 7
L+QERSR
Sbjct: 330 LVQERSR 336


>sp|GCSPA_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 LIQERSRQYS 10
L+ ER+R+Y+
Sbjct: 42 LVLERARKYA 51




55|SequenceR|280|271|NKLQDLIQER

>sp|KORC_METTM|2-OXOGLUTARATE synthase subunit KorC|Methanothermobacter marburgensis (strain ATCC

Query: 1 NKLQDLIQER 10
N++QD ++ER
Sbjct: 102 NEIQDFVEER 111


>sp|CYDE_METMP|L-CYSTEINE desulfidase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KLQDLIQER 10
KL+D I+ER
Sbjct: 99 KLEDFIKER 107


>sp|ILVC_SACI7|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 NKLQDLIQE 9
N+L+DLIQ+
Sbjct: 322 NQLKDLIQK 330


>sp|ILVC_SACI6|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain M.16.4

Query: 1 NKLQDLIQE 9
N+L+DLIQ+
Sbjct: 322 NQLKDLIQK 330


>sp|ILVC_SACI4|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain M.14.25

Query: 1 NKLQDLIQE 9
N+L+DLIQ+
Sbjct: 322 NQLKDLIQK 330


>sp|ILVC_SACI3|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 NKLQDLIQE 9
N+L+DLIQ+
Sbjct: 322 NQLKDLIQK 330


>sp|ILVC_SACI2|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 NKLQDLIQE 9
N+L+DLIQ+
Sbjct: 322 NQLKDLIQK 330


>sp|ILVC_SACI1|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 NKLQDLIQE 9
N+L+DLIQ+
Sbjct: 322 NQLKDLIQK 330


>sp|RADA_METVO|DNA repair and recombination protein|Methanococcus voltae

Query: 2 KLQDLIQE 9
K++DLIQE
Sbjct: 194 KIEDLIQE 201


>sp|RNH2_METJA|RIBONUCLEASE HII|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NKLQDLIQER 10
+K++D+I+ER
Sbjct: 127 DKIEDIIKER 136


>sp|ILVC_SACS2|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 1 NKLQDLIQE 9
N+L+DL+Q+
Sbjct: 322 NQLRDLVQK 330


>sp|PUS10_METV3|TRNA pseudouridine synthase Pus10|Methanococcus voltae (strain ATCC

Query: 2 KLQDLIQER 10
KL+DLI+E+
Sbjct: 48 KLKDLIEEK 56


>sp|FTSZ1_HALSA|CELL division protein FtsZ 1|Halobacterium salinarum (strain ATCC

Query: 1 NKLQDLIQE 9
N+L+D++QE
Sbjct: 41 NELEDVLQE 49


>sp|FTSZ1_HALS3|CELL division protein FtsZ 1|Halobacterium salinarum (strain ATCC

Query: 1 NKLQDLIQE 9
N+L+D++QE
Sbjct: 41 NELEDVLQE 49


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 NKLQDLIQER 10
NKL+D++ +R
Sbjct: 28 NKLRDIVSKR 37


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 NKLQDLIQER 10
NKL+D++ +R
Sbjct: 28 NKLRDIVSKR 37


>sp|PSTB_METHJ|PHOSPHATE import ATP-binding protein PstB|Methanospirillum hungatei JF-1

Query: 1 NKLQDLIQE 9
+K++DLI+E
Sbjct: 186 SKIEDLIEE 194




56|SequenceR|285|276|STLIENKLQD

>sp|TBP_AERPE|TATA-BOX-BINDING protein|Aeropyrum pernix (strain ATCC 700893

Query: 3 LIENKLQD 10
LIE K+QD
Sbjct: 42 LIETKIQD 49


>sp|KORC_METTM|2-OXOGLUTARATE synthase subunit KorC|Methanothermobacter marburgensis (strain ATCC

Query: 3 LIENKLQD 10
+IEN++QD
Sbjct: 99 VIENEIQD 106


>sp|RAD50_METMP|DNA double-strand break repair Rad50|Methanococcus maripaludis (strain

Query: 2 TLIENKLQD 10
+LIENKL++
Sbjct: 600 SLIENKLKN 608


>sp|Y801_METJA|UNCHARACTERIZED ATP-binding protein MJ0801|Methanocaldococcus jannaschii (strain

Query: 3 LIENKLQD 10
+IENKL D
Sbjct: 42 IIENKLSD 49


>sp|Y147_METJA|UNCHARACTERIZED ATP-binding protein MJ0147|Methanocaldococcus jannaschii (strain

Query: 3 LIENKLQD 10
+IENKL D
Sbjct: 46 IIENKLSD 53




57|SequenceR|290|281|PPINGSTLIE

>sp|SYS_METST|SERINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PPINGSTLIE 10
P +NG T+IE
Sbjct: 413 PYMNGKTIIE 422


>sp|Y312_METJA|UNCHARACTERIZED protein MJ0312|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PINGSTLI 9
P+NG TLI
Sbjct: 190 PVNGETLI 197


>sp|Y1087_AERPE|DNA-BINDING protein APE_1087b|Aeropyrum pernix (strain ATCC 700893

Query: 1 PPINGSTLIE 10
PP++ TL++
Sbjct: 86 PPVDDDTLVQ 95


>sp|DNLI2_METMA|DNA ligase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 INGSTLIE 10
ING TLI+
Sbjct: 351 INGKTLID 358


>sp|GLMS_AERPE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Aeropyrum pernix (strain ATCC 700893

Query: 1 PPINGSTLIE 10
PP G TL++
Sbjct: 572 PPTGGETLLD 581


>sp|RL18_PYRHO|LARGE ribosomal subunit protein uL18|Pyrococcus horikoshii (strain ATCC

Query: 1 PPINGSTL 8
PP+ GS++
Sbjct: 110 PPVRGSSI 117


>sp|AMASY_HALMA|APPARENT malate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PPINGSTLIE 10
PP GS L+E
Sbjct: 274 PPKTGSWLLE 283




58|SequenceR|295|286|IYQYNPPING

>sp|PNCB_METBU|NICOTINATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 2 YQYNPPIN 9
+ YNPP+N
Sbjct: 352 FSYNPPLN 359


>sp|METXA_METBU|HOMOSERINE O-acetyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 2 YQYNPPING 10
Y+ PP+NG
Sbjct: 209 YEGEPPVNG 217


>sp|CAS1_HALVD|CRISPR-ASSOCIATED endonuclease Cas1|Haloferax volcanii (strain ATCC 29605

Query: 3 QYNPPIN 9
+YNPP N
Sbjct: 183 EYNPPSN 189


>sp|PURL_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 YQYNPPIN 9
+QYNP +N
Sbjct: 160 FQYNPMVN 167


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YQYNPPIN 9
Y+YNP +N
Sbjct: 267 YRYNPKLN 274


>sp|HEM11_PYRAR|GLUTAMYL-TRNA reductase 1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 YQYNPP 7
Y YNPP
Sbjct: 52 YLYNPP 57


>sp|PATS_METJA|SOLUBLE P-type ATPase-like phosphatase|Methanocaldococcus jannaschii

Query: 5 NPPIN 9
NPPIN
Sbjct: 81 NPPIN 85


>sp|RFCL_THEPD|REPLICATION factor C large subunit|Thermofilum pendens (strain DSM 2475

Query: 1 IYQYNPPING 10
+YQY P +
Sbjct: 277 VYQYEPSLQA 286


>sp|GCS2_HALWD|GLUTAMATE--CYSTEINE ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IYQYNPPING 10
IY YN P G
Sbjct: 38 IYDYNHPPAG 47


>sp|PUR5_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 6 PPING 10
PPING
Sbjct: 261 PPING 265


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IYQYNPP 7
+YQY PP
Sbjct: 107 LYQYAPP 113


>sp|HIS8_METJA|HISTIDINOL-PHOSPHATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IYQYNPPIN 9
I+QY P+N
Sbjct: 67 IHQYPEPVN 75


>sp|TRPA_NATPD|TRYPTOPHAN synthase alpha chain|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IYQYNP 6
IYQY P
Sbjct: 96 IYQYGP 101


>sp|RTCB_NANEQ|TRNA-SPLICING ligase RtcB|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 YNPPING 10
Y PPI G
Sbjct: 69 YGPPIGG 75


>sp|UDGA_SACS2|TYPE-4 uracil-DNA glycosylase|Saccharolobus solfataricus (strain ATCC

Query: 4 YNPPI 8
YNPPI
Sbjct: 170 YNPPI 174


>sp|HIS8_META3|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 IYQYNPPIN 9
I+QY P+N
Sbjct: 64 IHQYPEPVN 72


>sp|Y812_ARCFU|UNCHARACTERIZED protein AF_0812|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YQYNPPI 8
Y Y PP+
Sbjct: 196 YSYQPPV 202


>sp|HIS8_METM6|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C6 /

Query: 1 IYQYNPPIN 9
++QY PIN
Sbjct: 64 LHQYPQPIN 72


>sp|HIS8_METMP|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IYQYNPPIN 9
++QY PIN
Sbjct: 64 LHQYPQPIN 72


>sp|HIS8_METM7|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C7 /

Query: 1 IYQYNPPIN 9
++QY PIN
Sbjct: 64 LHQYPQPIN 72


>sp|HIS8_METM5|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C5 /

Query: 1 IYQYNPPIN 9
++QY PIN
Sbjct: 64 LHQYPQPIN 72




59|SequenceR|300|291|SIPQFIYQYN

>sp|KDGA_THETE|2-DEHYDRO-3-DEOXY-D-GLUCONATE/2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE aldolase|Thermoproteus tenax

Query: 1 SIPQFIYQY 9
SIP F+Y Y
Sbjct: 142 SIPVFLYNY 150


>sp|PRIS_METST|DNA primase small subunit PriS|Methanosphaera stadtmanae (strain ATCC

Query: 1 SIPQFIYQYN 10
++P+F+Y+ N
Sbjct: 314 AVPKFVYERN 323


>sp|GATE_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus vannielii (strain ATCC

Query: 4 QFIYQY 9
+FIYQY
Sbjct: 70 KFIYQY 75


>sp|GATE_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain DSM

Query: 4 QFIYQY 9
+FIYQY
Sbjct: 70 KFIYQY 75


>sp|GATE_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C7 /

Query: 4 QFIYQY 9
+FIYQY
Sbjct: 70 KFIYQY 75


>sp|GATE_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C6 /

Query: 4 QFIYQY 9
+FIYQY
Sbjct: 70 KFIYQY 75


>sp|GATE_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C5 /

Query: 4 QFIYQY 9
+FIYQY
Sbjct: 70 KFIYQY 75


>sp|QUEC_METTP|7-CYANO-7-DEAZAGUANINE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 PQFIYQYN 10
P+F+ Q+N
Sbjct: 138 PEFVEQFN 145


>sp|TRM56_HYPBU|TRNA (cytidine(56)-2'-O)-methyltransferase|Hyperthermus butylicus

Query: 2 IPQFIYQY 9
+P F Y+Y
Sbjct: 124 VPPFFYEY 131


>sp|SYE_NATPD|GLUTAMATE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 QFIYQY 9
QF+Y+Y
Sbjct: 320 QFVYEY 325


>sp|TRM1_META3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus aeolicus

Query: 2 IPQFIYQYN 10
I +FIY+Y+
Sbjct: 364 IVEFIYKYD 372




60|SequenceR|305|296|LKASASIPQF

***** No hits found ******


61|SequenceR|310|301|YPNMYLKASA

>sp|METXA_METRM|HOMOSERINE O-acetyltransferase|Methanobrevibacter ruminantium (strain ATCC

Query: 1 YPNMYLKAS 9
YPNM KAS
Sbjct: 165 YPNMMKKAS 173


>sp|MCRD_METJA|METHYL-COENZYME M reductase I operon|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YPNMYLKAS 9
+P+ YLKAS
Sbjct: 9 FPHRYLKAS 17


>sp|MTBB2_METBA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri

Query: 1 YPNMYLKA 8
+P+MY++A
Sbjct: 187 FPDMYIEA 194


>sp|MTBB1_METAC|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina acetivorans (strain ATCC

Query: 1 YPNMYLKA 8
+P+MY++A
Sbjct: 235 FPDMYIEA 242


>sp|MTBB1_METBA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri

Query: 1 YPNMYLKA 8
+P+MY++A
Sbjct: 235 FPDMYIEA 242


>sp|MTBB2_METBF|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri (strain Fusaro /

Query: 1 YPNMYLKA 8
+P+MY++A
Sbjct: 235 FPDMYIEA 242


>sp|MTBB1_METBF|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri (strain Fusaro /

Query: 1 YPNMYLKA 8
+P+MY++A
Sbjct: 235 FPDMYIEA 242


>sp|MTBB3_METMA|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YPNMYLKA 8
+P+MY++A
Sbjct: 235 FPDMYIEA 242


>sp|MTBB2_METMA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YPNMYLKA 8
+P+MY++A
Sbjct: 235 FPDMYIEA 242


>sp|MCRW_METJA|METHYL-COENZYME M reductase II operon|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YPNMYLKA 8
+P+ YLKA
Sbjct: 20 FPHRYLKA 27


>sp|TTUA_PYRHO|TRNA-5-METHYLURIDINE(54) 2-sulfurtransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YPNMYL 6
YP MYL
Sbjct: 16 YPKMYL 21


>sp|Y1214_PYRHO|UNCHARACTERIZED ABC transporter extracellular-binding protein|Pyrococcus

Query: 1 YPNMYLKAS 9
YPN+ +KA+
Sbjct: 70 YPNIKIKAN 78


>sp|MCRD_METVA|METHYL-COENZYME M reductase operon protein|Methanococcus vannielii

Query: 1 YPNMYLKA 8
+P+ YLKA
Sbjct: 7 FPHRYLKA 14




62|SequenceR|315|306|LESEAYPNMY

>sp|THI4_METTH|THIAMINE thiazole synthase|Methanothermobacter thermautotrophicus (strain

Query: 4 EAYPNMY 10
E YPN+Y
Sbjct: 214 EVYPNLY 220


>sp|THI4_METBU|THIAMINE thiazole synthase|Methanococcoides burtonii (strain DSM 6242

Query: 4 EAYPNMY 10
E YPN+Y
Sbjct: 214 EVYPNLY 220


>sp|THI4_METJA|THIAMINE thiazole synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EAYPNMY 10
E YPN++
Sbjct: 220 EVYPNLF 226


>sp|PSB2_SACI9|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain L.D.8.5 /

Query: 1 LESEAYPNM 9
LESE PNM
Sbjct: 143 LESEYDPNM 151


>sp|PSB2_SACI7|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LESEAYPNM 9
LESE PNM
Sbjct: 143 LESEYDPNM 151


>sp|PSB2_SACI6|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LESEAYPNM 9
LESE PNM
Sbjct: 143 LESEYDPNM 151


>sp|PSB2_SACI4|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LESEAYPNM 9
LESE PNM
Sbjct: 143 LESEYDPNM 151


>sp|PSB2_SACI3|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain M.16.27)

Query: 1 LESEAYPNM 9
LESE PNM
Sbjct: 143 LESEYDPNM 151


>sp|PSB2_SACI2|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LESEAYPNM 9
LESE PNM
Sbjct: 143 LESEYDPNM 151


>sp|PSB1_SACS9|PROTEASOME subunit beta 1|Saccharolobus solfataricus (strain 98/2) (Sulfolobus

Query: 1 LESEAYPNM 9
LESE PNM
Sbjct: 143 LESEYDPNM 151


>sp|PSB1_SACS2|PROTEASOME subunit beta 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LESEAYPNM 9
LESE PNM
Sbjct: 143 LESEYDPNM 151


>sp|PSB1_SACI1|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LESEAYPNM 9
LESE PNM
Sbjct: 143 LESEYDPNM 151




63|SequenceR|320|311|LKPTKLESEA

>sp|METAA_THEXX|HOMOSERINE O-acetyltransferase|Thermoplasmatales archaeon (strain BRNA1)

Query: 1 LKPTKLESE 9
L PTK+E+E
Sbjct: 43 LMPTKVETE 51


>sp|METAA_METAX|HOMOSERINE O-acetyltransferase|Methanomethylophilus alvi (strain Mx1201)

Query: 1 LKPTKLESE 9
L PTK+E+E
Sbjct: 43 LMPTKVETE 51


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KPTKLESEA 10
+PT+LE EA
Sbjct: 518 EPTRLEFEA 526


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KPTKLESEA 10
+PT+LE EA
Sbjct: 518 EPTRLEFEA 526


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 KPTKLESEA 10
+PT+LE EA
Sbjct: 518 EPTRLEFEA 526


>sp|RTCA_HYPBU|RNA 3'-terminal phosphate cyclase|Hyperthermus butylicus (strain DSM

Query: 1 LKPTKLE 7
LKP KLE
Sbjct: 175 LKPVKLE 181




64|SequenceR|325|316|EINCDLKPTK

>sp|Y1322_METST|UPF0280 protein Msp_1322|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 EINCDLKP 8
+INCD+KP
Sbjct: 23 DINCDIKP 30


>sp|GLYA_SACI6|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4

Query: 3 NCDLKPT 9
+CDL+PT
Sbjct: 86 DCDLRPT 92


>sp|GLYA_SACI4|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25

Query: 3 NCDLKPT 9
+CDL+PT
Sbjct: 86 DCDLRPT 92


>sp|GLYA_SACS2|SERINE hydroxymethyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 3 NCDLKPT 9
+CDL+PT
Sbjct: 86 DCDLRPT 92


>sp|GLYA_SACI2|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 3 NCDLKPT 9
+CDL+PT
Sbjct: 86 DCDLRPT 92


>sp|GLYA_SACI7|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 3 NCDLKPT 9
+CDL+PT
Sbjct: 86 DCDLRPT 92


>sp|GLYA_SACI3|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 3 NCDLKPT 9
+CDL+PT
Sbjct: 86 DCDLRPT 92


>sp|GLYA_SACI1|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 3 NCDLKPT 9
+CDL+PT
Sbjct: 86 DCDLRPT 92


>sp|GLYA_METS5|SERINE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 4 CDLKPT 9
CDL+PT
Sbjct: 87 CDLRPT 92


>sp|GGGPS_METB6|GERANYLGERANYLGLYCERYL phosphate synthase|Methanoregula boonei (strain DSM 21154

Query: 4 CDLKPTK 10
CDLKP +
Sbjct: 135 CDLKPAE 141


>sp|MFNB_METM7|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain C7 /

Query: 1 EINCDL 6
EINCD+
Sbjct: 199 EINCDI 204


>sp|MFNB_METM6|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain C6 /

Query: 1 EINCDL 6
EINCD+
Sbjct: 199 EINCDI 204


>sp|GPMI1_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina acetivorans (strain ATCC

Query: 4 CDLKPT 9
CDL PT
Sbjct: 488 CDLAPT 493


>sp|GPMI1_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina barkeri (strain Fusaro /

Query: 4 CDLKPT 9
CDL PT
Sbjct: 491 CDLAPT 496


>sp|SYM_METM7|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 INCDLKPTK 10
I C+LKP K
Sbjct: 620 IICNLKPAK 628


>sp|SYM_METM5|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 INCDLKPTK 10
I C+LKP K
Sbjct: 620 IICNLKPAK 628


>sp|SYM_METMP|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 INCDLKPTK 10
I C+LKP K
Sbjct: 620 IICNLKPAK 628


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 4 CDLKPTK 10
C+LKP K
Sbjct: 622 CNLKPAK 628


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 CDLKPTK 10
C+LKP K
Sbjct: 632 CNLKPAK 638


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CDLKPTK 10
C+LKP K
Sbjct: 609 CNLKPAK 615




65|SequenceR|330|321|AINQIEINCD

>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 2 INQIEINCD 10
IN++ +NCD
Sbjct: 563 INEVHVNCD 571


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 2 INQIEINCD 10
IN++ +NCD
Sbjct: 563 INEVHVNCD 571


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 2 INQIEINCD 10
+N++ INCD
Sbjct: 561 LNEVHINCD 569


>sp|PHOU_ARCFU|PHOSPHATE-SPECIFIC transport system accessory protein|Archaeoglobus fulgidus (strain

Query: 1 AINQIEINCD 10
AI Q+E +CD
Sbjct: 151 AIEQLEESCD 160


>sp|SYFB_METJA|PHENYLALANINE--TRNA ligase beta subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 INQIEINCD 10
+NQ+E CD
Sbjct: 361 LNQLEKKCD 369




66|SequenceR|335|326|KTLEIAINQI

>sp|Y1188_METJA|UNCHARACTERIZED protein MJ1188|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KTLEIAINQ 9
+TLE+AIN+
Sbjct: 130 RTLEVAINK 138




67|SequenceR|340|331|SLYQPKTLEI

>sp|KAE1B_THEVO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 SLYQPKT 7
S+Y+PKT
Sbjct: 29 SMYKPKT 35


>sp|Y462_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 SLYQPKTLEI 10
L QP TLEI
Sbjct: 237 GLRQPTTLEI 246


>sp|Y3551_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 SLYQPKTLEI 10
L QP TLEI
Sbjct: 237 GLRQPTTLEI 246


>sp|KAE1B_THEAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 SLYQPKT 7
S+Y+PKT
Sbjct: 29 SMYRPKT 35


>sp|RFCL_ARCFU|REPLICATION factor C large subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YQPKTLE 9
Y+PKTLE
Sbjct: 7 YRPKTLE 13


>sp|IF2P_HALMA|PROBABLE translation initiation factor IF-2|Haloarcula marismortui (strain

Query: 3 YQPKTLE 9
+QP+TLE
Sbjct: 116 FQPQTLE 122


>sp|RS7_THECE|SMALL ribosomal subunit protein uS7|Thermococcus celer

Query: 2 LYQPKTLEI 10
YQPK L++
Sbjct: 9 FYQPKELKV 17


>sp|RFCL_METAC|REPLICATION factor C large subunit|Methanosarcina acetivorans (strain ATCC

Query: 3 YQPKTLE 9
Y+P+TLE
Sbjct: 16 YRPRTLE 22


>sp|IF2P_THESM|PROBABLE translation initiation factor IF-2|Thermococcus sibiricus (strain

Query: 3 YQPKTLE 9
+QP+TLE
Sbjct: 108 FQPQTLE 114


>sp|RS7_THEON|SMALL ribosomal subunit protein uS7|Thermococcus onnurineus (strain

Query: 2 LYQPKTLEI 10
YQPK L++
Sbjct: 9 FYQPKELKV 17


>sp|SPEE_THEVO|POLYAMINE aminopropyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LYQPKTLEI 10
YQPK L++
Sbjct: 196 FYQPKALKL 204


>sp|VOLA_HALVD|VOLACTIN volcanii (strain ATCC 29605

Query: 1 SLYQPKTLE 9
+LY KTLE
Sbjct: 129 TLYHDKTLE 137


>sp|RFCS_SACS2|REPLICATION factor C small subunit|Saccharolobus solfataricus (strain ATCC

Query: 3 YQPKTLE 9
Y+PKTL+
Sbjct: 14 YRPKTLD 20


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 3 YQPKTLE 9
Y+PKTL+
Sbjct: 13 YRPKTLD 19


>sp|RFCL_NANEQ|REPLICATION factor C large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 YQPKTLE 9
Y+PKTL+
Sbjct: 37 YRPKTLD 43


>sp|RFCS_STAMF|REPLICATION factor C small subunit|Staphylothermus marinus (strain ATCC 43588

Query: 3 YQPKTLE 9
Y+PKTL+
Sbjct: 17 YRPKTLD 23


>sp|KPRS_PYRFU|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SLYQPKTLE 9
++ PKTLE
Sbjct: 119 DIHNPKTLE 127


>sp|Y1505_METJA|PUTATIVE ATP-dependent RNA helicase MJ1505|Methanocaldococcus jannaschii

Query: 2 LYQPKTLE 9
L +PKTLE
Sbjct: 7 LIKPKTLE 14


>sp|RFCL_METS3|REPLICATION factor C large subunit|Methanobrevibacter smithii (strain ATCC

Query: 3 YQPKTLE 9
Y+PKTL+
Sbjct: 7 YRPKTLD 13




68|SequenceR|345|336|LLDIMSLYQP

>sp|LYSK_SACI3|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 LLDIMSLYQP 10
LLD++S+Y P
Sbjct: 16 LLDLLSIYTP 25


>sp|LYSK_SACI1|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LLDIMSLYQP 10
LLD++S+Y P
Sbjct: 16 LLDLLSIYTP 25


>sp|LYSK_SACI7|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LLDIMSLYQP 10
LLD++S+Y P
Sbjct: 16 LLDLLSIYTP 25


>sp|LYSK_SACI6|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LLDIMSLYQP 10
LLD++S+Y P
Sbjct: 16 LLDLLSIYTP 25


>sp|LYSK_SACI4|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LLDIMSLYQP 10
LLD++S+Y P
Sbjct: 16 LLDLLSIYTP 25


>sp|LYSK_SACI2|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LLDIMSLYQP 10
LLD++S+Y P
Sbjct: 16 LLDLLSIYTP 25


>sp|LYSK_SACS2|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LLDIMSLYQP 10
LLD++S+Y P
Sbjct: 16 LLDLLSIYTP 25


>sp|RS7_SULAC|SMALL ribosomal subunit protein uS7|Sulfolobus acidocaldarius (strain

Query: 2 LDIMSLYQP 10
+D+MS+Y P
Sbjct: 33 IDLMSIYLP 41


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 2 LDIMSLY 8
LD MSLY
Sbjct: 370 LDFMSLY 376


>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 1 LLDIMSLYQP 10
LLDI+ Y+P
Sbjct: 109 LLDIIIWYKP 118


>sp|FLAC_METJA|PUTATIVE flagella-related protein C|Methanocaldococcus jannaschii (strain

Query: 1 LLDIMSLYQ 9
L DIM+LY+
Sbjct: 46 LQDIMALYE 54


>sp|DPOL_METVO|DNA polymerase|Methanococcus voltae

Query: 2 LDIMSLY 8
LD MSLY
Sbjct: 449 LDFMSLY 455




69|SequenceR|350|341|YDVSELLDIM

>sp|PYRDB_METAR|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanocella arvoryzae (strain

Query: 1 YDVSELLDI 9
YD+ E+LDI
Sbjct: 224 YDLYEVLDI 232


>sp|HPRL1_HALMA|HGPRTASE-LIKE protein 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 YDVSELLDI 9
YDV+ LLDI
Sbjct: 163 YDVTSLLDI 171


>sp|PYRDB_PYRHO|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus horikoshii (strain

Query: 1 YDVSELLDI 9
YD++++LDI
Sbjct: 227 YDLAKVLDI 235


>sp|Y3061_HALSA|PUTATIVE sulfur carrier protein

Query: 1 YDVSELLDI 9
YD++E LD+
Sbjct: 5 YDITETLDV 13


>sp|ATGT_THEAC|TRNA-GUANINE(15) transglycosylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YDVSELLDIM 10
YD S L+DI+
Sbjct: 194 YDYSTLVDII 203


>sp|CDC6H_HALMA|ORC1-TYPE DNA replication protein 8|Haloarcula marismortui (strain ATCC 43049

Query: 1 YDVSELLDIM 10
YD +EL DI+
Sbjct: 218 YDATELRDIL 227


>sp|SYS_HALSA|SERINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 YDVSELLDIM 10
YD+ E LDI+
Sbjct: 144 YDLGEELDIL 153


>sp|SYS_HALS3|SERINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 YDVSELLDIM 10
YD+ E LDI+
Sbjct: 144 YDLGEELDIL 153


>sp|THII_METMA|PROBABLE tRNA sulfurtransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YDVSELLDI 9
+D SE++DI
Sbjct: 339 FDKSEIIDI 347


>sp|CAS8A_METJA|CRISPR-ASSOCIATED protein Cas8a2/Csa4|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YDVSELLDIM 10
YD+S+L+D +
Sbjct: 297 YDLSKLMDFL 306


>sp|Y077_METJA|UNCHARACTERIZED protein MJ0077|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DVSELLD 8
D+SELLD
Sbjct: 94 DISELLD 100


>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 YDVSELLDI 9
YD +E+LD+
Sbjct: 775 YDTAEVLDV 783


>sp|TYW3_ARCFU|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 YDVSELLDIM 10
+D+ ELLD++
Sbjct: 25 FDIVELLDLI 34


>sp|NIFD_METTL|NITROGENASE molybdenum-iron protein alpha chain|Methanothermococcus

Query: 1 YDVSELLDI 9
YDV++ LD+
Sbjct: 295 YDVAKALDL 303




70|SequenceR|355|346|ANRVMYDVSE

>sp|GUAAB_THEVO|GMP synthase [glutamine-hydrolyzing] subunit B|Thermoplasma volcanium

Query: 2 NRVMYDVS 9
NRV+YD++
Sbjct: 293 NRVVYDIT 300


>sp|GUAAB_PICTO|GMP synthase [glutamine-hydrolyzing] subunit B|Picrophilus torridus

Query: 2 NRVMYDVS 9
NRV+YD++
Sbjct: 288 NRVVYDIT 295


>sp|GUAAB_THEAC|GMP synthase [glutamine-hydrolyzing] subunit B|Thermoplasma acidophilum

Query: 2 NRVMYDVS 9
NRV+YD++
Sbjct: 293 NRVVYDIT 300


>sp|CDC62_METTH|ORC1-TYPE DNA replication protein 2|Methanothermobacter thermautotrophicus

Query: 1 ANRVMYDV 8
AN+V+YD+
Sbjct: 159 ANKVLYDI 166


>sp|SYT_METKA|THREONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 VMYDVSE 10
VMYD+SE
Sbjct: 252 VMYDLSE 258


>sp|PROA_NATPD|GAMMA-GLUTAMYL phosphate reductase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ANRVMYDV 8
+NRV+Y++
Sbjct: 158 SNRVLYEI 165




71|SequenceR|360|351|YKRYPANRVM

>sp|KPRS_METJA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YKRYPANRV 9
YKR+P N +
Sbjct: 29 YKRFPDNEI 37


>sp|KAD6_THEAC|PUTATIVE adenylate kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KRYPANRV 9
+R PANR+
Sbjct: 117 ERLPANRI 124


>sp|Y006_METJA|UNCHARACTERIZED oxidoreductase MJ0006|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YKRYPAN 7
YKR+P N
Sbjct: 32 YKRHPIN 38


>sp|SYFB_METB6|PHENYLALANINE--TRNA ligase beta subunit|Methanoregula boonei (strain DSM 21154

Query: 2 KRYPANRV 9
K +PANR+
Sbjct: 352 KEHPANRI 359


>sp|KAD6_THEVO|PUTATIVE adenylate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KRYPANRV 9
+R PANR+
Sbjct: 120 ERLPANRI 127


>sp|RS2_CALMQ|SMALL ribosomal subunit protein uS2|Caldivirga maquilingensis (strain

Query: 3 RYPANRVM 10
RYP +RVM
Sbjct: 72 RYPPSRVM 79


>sp|RL34_METVS|LARGE ribosomal subunit protein eL34|Methanococcus vannielii (strain

Query: 1 YKRYPANR 8
YKR P NR
Sbjct: 15 YKRAPGNR 22


>sp|MCRA_METKA|METHYL-COENZYME M reductase I subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 YKRYPA 6
Y+RYPA
Sbjct: 388 YERYPA 393


>sp|SFSA_SULAC|SUGAR fermentation stimulation protein homolog|Sulfolobus

Query: 4 YPANRVM 10
YP NR++
Sbjct: 50 YPGNRIL 56


>sp|RS2_PYRAR|SMALL ribosomal subunit protein uS2|Pyrobaculum arsenaticum (strain DSM

Query: 3 RYPANRVM 10
RYP +RV+
Sbjct: 67 RYPPDRVL 74


>sp|RS2_PYRNV|SMALL ribosomal subunit protein uS2|Pyrobaculum neutrophilum (strain

Query: 3 RYPANRVM 10
RYP +RV+
Sbjct: 66 RYPPDRVL 73


>sp|RS2_PYRCJ|SMALL ribosomal subunit protein uS2|Pyrobaculum calidifontis (strain

Query: 3 RYPANRVM 10
RYP +RV+
Sbjct: 67 RYPPDRVL 74


>sp|ATGT_METS3|TRNA-GUANINE(15) transglycosylase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 RYPANRVM 10
+YP NRV+
Sbjct: 580 QYPKNRVV 587




72|SequenceR|365|356|PLYPKYKRYP

>sp|PRIL_ARCFU|DNA primase large subunit PriL|Archaeoglobus fulgidus (strain ATCC

Query: 1 PLYPKYKRYP 10
PLYP RYP
Sbjct: 5 PLYPILARYP 14


>sp|UVRB_HALSA|UVRABC system protein B|Halobacterium salinarum (strain ATCC 700922

Query: 2 LYPKYKRYP 10
+YP Y RYP
Sbjct: 216 VYPMYGRYP 224


>sp|HCP_METAR|HYDROXYLAMINE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 3 YPKYKRYP 10
YP+ K+YP
Sbjct: 275 YPELKKYP 282


>sp|COOS_ARCFU|CARBON monoxide dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PLYPKYKRY 9
P P+Y+RY
Sbjct: 337 PSLPEYQRY 345


>sp|UVRB_HALMA|UVRABC system protein B|Haloarcula marismortui (strain ATCC 43049

Query: 2 LYPKYKRY 9
+YP Y RY
Sbjct: 216 IYPMYARY 223


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 1 PLYPKY 6
PL+PKY
Sbjct: 498 PLHPKY 503


>sp|KHSE_THEVO|HOMOSERINE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PLYPKYKR 8
P++P Y+R
Sbjct: 232 PIFPYYRR 239


>sp|MTRD_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina mazei (strain ATCC

Query: 4 PKYKRYP 10
PK+K++P
Sbjct: 217 PKFKKWP 223


>sp|MTRD_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina barkeri (strain Fusaro

Query: 4 PKYKRYP 10
PK+K++P
Sbjct: 217 PKFKKWP 223


>sp|PYRH_AERPE|URIDYLATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LYPKYKRYP 10
LYP+ + YP
Sbjct: 84 LYPRSQPYP 92


>sp|KHSE_SULAC|HOMOSERINE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PLYPKYKR 8
PL+P Y++
Sbjct: 232 PLFPHYEK 239


>sp|MTRD_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina acetivorans (strain

Query: 4 PKYKRYP 10
PK+K++P
Sbjct: 216 PKWKKWP 222


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 1 PLYPKYKRY 9
PL+P+Y Y
Sbjct: 470 PLHPRYLYY 478


>sp|RAD50_THEKO|DNA double-strand break repair Rad50|Thermococcus kodakarensis (strain

Query: 4 PKYKRY 9
P YKRY
Sbjct: 601 PAYKRY 606


>sp|Y271_METJA|UNCHARACTERIZED protein MJ0271|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LYPKYK 7
L+PKYK
Sbjct: 100 LFPKYK 105


>sp|UPPP_PYRIL|UNDECAPRENYL-DIPHOSPHATASE islandicum (strain DSM 4184

Query: 1 PLYPKYKRY 9
PLY KRY
Sbjct: 98 PLYMAAKRY 106


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 PLYPKYKRY 9
PL+PKY +
Sbjct: 486 PLHPKYTYF 494


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 PLYPKYKRY 9
PL+PKY +
Sbjct: 486 PLHPKYTYF 494


>sp|TATCO_HALVD|SEC-INDEPENDENT protein translocase protein TatCo|Haloferax volcanii (strain ATCC

Query: 2 LYPKYKRY 9
LYPK ++Y
Sbjct: 301 LYPKERKY 308


>sp|NADA_PYRHO|QUINOLINATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LYPKYKRYP 10
LYP+ K YP
Sbjct: 241 LYPQKKFYP 249


>sp|AATA_THEPD|A-TYPE ATP synthase subunit A|Thermofilum pendens (strain DSM 2475

Query: 1 PLYPKYKR 8
P +PKY+R
Sbjct: 454 PEFPKYRR 461


>sp|RS17_HALSA|SMALL ribosomal subunit protein uS17|Halobacterium salinarum (strain

Query: 4 PKYKRY 9
PKY RY
Sbjct: 56 PKYDRY 61


>sp|RS17_HALS3|SMALL ribosomal subunit protein uS17|Halobacterium salinarum (strain

Query: 4 PKYKRY 9
PKY RY
Sbjct: 56 PKYDRY 61


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 PLYPKYKRY 9
PL+PKY +
Sbjct: 486 PLHPKYTYF 494


>sp|Y1542_METJA|UNCHARACTERIZED protein MJ1542|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LYPKYKR 8
LYPKY++
Sbjct: 506 LYPKYQK 512


>sp|HCP_METVS|HYDROXYLAMINE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 3 YPKYKRY 9
YP +K+Y
Sbjct: 270 YPAFKKY 276


>sp|HCP_METMA|HYDROXYLAMINE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 YPKYKRY 9
YP +K+Y
Sbjct: 267 YPAFKKY 273


>sp|NADA_PYRAB|QUINOLINATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 LYPKYKRYP 10
LYP+ K YP
Sbjct: 241 LYPEKKFYP 249


>sp|NADA_THEGJ|QUINOLINATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 LYPKYKRYP 10
LYP K YP
Sbjct: 244 LYPNIKFYP 252


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 1 PLYPKY 6
PL+PKY
Sbjct: 465 PLHPKY 470


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 PLYPKYKRY 9
PL+PK+ Y
Sbjct: 483 PLHPKFTFY 491


>sp|RS17_METBF|SMALL ribosomal subunit protein uS17|Methanosarcina barkeri (strain

Query: 2 LYPKYKRY 9
L PKY+RY
Sbjct: 56 LVPKYQRY 63


>sp|NADA_PYRFU|QUINOLINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LYPKYKRYP 10
LYP K YP
Sbjct: 245 LYPNKKFYP 253


>sp|Y952_ARCFU|UNCHARACTERIZED protein AF_0952|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LYPKYKRY 9
+YP+YK Y
Sbjct: 57 IYPEYKDY 64


>sp|NADA_THEKO|QUINOLINATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LYPKYKRYP 10
LYP K YP
Sbjct: 244 LYPSKKFYP 252


>sp|APE1_SACS2|PROBABLE aminopeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LYPKYKRY 9
L KYKRY
Sbjct: 644 LLEKYKRY 651


>sp|MFNC_METJA|(5-FORMYLFURAN-3-YL)METHYL phosphate transaminase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PLYPKYKRY 9
P YP YK +
Sbjct: 121 PCYPCYKNF 129


>sp|NARH_HALMT|RESPIRATORY nitrate reductase subunit beta|Haloferax mediterranei (strain ATCC

Query: 1 PLYPKYKRYP 10
PL+P+Y+ P
Sbjct: 262 PLHPEYQTQP 271


>sp|HMGCS_METBF|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PLYPKYKRY 9
P+Y Y RY
Sbjct: 331 PIYIDYARY 339


>sp|NADK_AERPE|NAD kinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LYPKYKRY 9
+YP+Y+ Y
Sbjct: 120 VYPRYRVY 127


>sp|COFG_METBF|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PLYPKYKR 8
P+YP+Y R
Sbjct: 293 PIYPQYVR 300




73|SequenceR|370|361|GNTHLPLYPK

>sp|TRM10_SULAC|TRNA (adenine(9)-N1)-methyltransferase|Sulfolobus acidocaldarius

Query: 4 HLPLYPK 10
HLP YPK
Sbjct: 83 HLPEYPK 89


>sp|SYDND_METKA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 NTHLPLYP 9
+THLPL P
Sbjct: 102 DTHLPLDP 109


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GNTHLPLYPK 10
GN HLPL K
Sbjct: 205 GNPHLPLNAK 214


>sp|PRIL_METBU|DNA primase large subunit PriL|Methanococcoides burtonii (strain DSM

Query: 2 NTHLPLYP 9
N HL LYP
Sbjct: 3 NRHLALYP 10


>sp|RTCA_THESM|RNA 3'-terminal phosphate cyclase|Thermococcus sibiricus (strain DSM

Query: 1 GNTHLPLYPK 10
G+T L YPK
Sbjct: 69 GSTELEFYPK 78


>sp|PRIL_ARCFU|DNA primase large subunit PriL|Archaeoglobus fulgidus (strain ATCC

Query: 4 HLPLYP 9
+LPLYP
Sbjct: 3 YLPLYP 8


>sp|Y1066_METJA|UNCHARACTERIZED protein MJ1066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 LPLYPK 10
LP+YPK
Sbjct: 360 LPIYPK 365


>sp|Y2077_ARCFU|UNCHARACTERIZED protein AF_2077|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GNTHLPLYPK 10
GNT +PL+ +
Sbjct: 149 GNTTVPLFTR 158


>sp|DAPA_METBF|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GNTHLPLYP 9
GN LPL P
Sbjct: 263 GNLRLPLAP 271


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 NTHLPLYP 9
N +PLYP
Sbjct: 324 NKEVPLYP 331


>sp|MCT_HALHT|SUCCINYL-COA:MESACONATE CoA-transferase|Haloarcula hispanica (strain ATCC 33960

Query: 1 GNTHLPLYP 9
GN+H L+P
Sbjct: 232 GNSHPTLFP 240


>sp|MCT_HALMA|SUCCINYL-COA:MESACONATE CoA-transferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GNTHLPLYP 9
GN+H L+P
Sbjct: 232 GNSHPTLFP 240


>sp|T1R1_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 NTHLPLY 8
N HLP Y
Sbjct: 119 NIHLPAY 125


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GNTHLP 6
G THLP
Sbjct: 718 GGTHLP 723


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 GNTHLP 6
G THLP
Sbjct: 718 GGTHLP 723


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GNTHLP 6
G THLP
Sbjct: 718 GGTHLP 723


>sp|LYSX_SULTO|ALPHA-AMINOADIPATE--LYSW ligase LysX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GNTHLPLYPK 10
G+T +P+Y K
Sbjct: 25 GHTVIPIYTK 34


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GNTHLP 6
G THLP
Sbjct: 720 GGTHLP 725


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GNTHLPLYP 9
G+ HL YP
Sbjct: 692 GSVHLQSYP 700




74|SequenceR|375|366|KWWRRGNTHL

>sp|Y921_METJA|UNCHARACTERIZED protein MJ0921|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WRRGNTH 9
WR GN H
Sbjct: 49 WREGNKH 55


>sp|Y3504_METJA|UNCHARACTERIZED protein MJECL04|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KWWRRG 6
+WW RG
Sbjct: 357 RWWHRG 362


>sp|SYR_HALWD|ARGININE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 KWWRRGNTHL 10
+++RRGN L
Sbjct: 200 RYYRRGNEFL 209


>sp|DLD_ARCFU|D-LACTATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KWWRRGN 7
++WRR N
Sbjct: 337 EYWRRSN 343


>sp|Y1052_ARCFU|UNCHARACTERIZED protein AF_1052|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KWWRRGNT 8
++W RG T
Sbjct: 119 EYWERGET 126


>sp|RL31_METMJ|LARGE ribosomal subunit protein eL31|Methanoculleus marisnigri (strain

Query: 3 WRRGNT 8
W+RGNT
Sbjct: 23 WKRGNT 28


>sp|RL31_THEAC|LARGE ribosomal subunit protein eL31|Thermoplasma acidophilum (strain

Query: 1 KWWRRGNTHL 10
K W RG H+
Sbjct: 59 KIWERGREHI 68




75|SequenceR|380|371|SDIAYKWWRR

>sp|Y678_METJA|UNCHARACTERIZED protein MJ0678|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 YKWWRR 10
Y+WW++
Sbjct: 287 YRWWKK 292


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 SDIAYKWWR 9
S ++WWR
Sbjct: 429 SPYVFEWWR 437


>sp|IDI2_PYRAE|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 YKWW 8
YKWW
Sbjct: 244 YKWW 247


>sp|Y1382_METTH|UNCHARACTERIZED transporter MTH_1382|Methanothermobacter thermautotrophicus

Query: 3 IAYKWWRR 10
IAY W RR
Sbjct: 82 IAYLWARR 89


>sp|Y462_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 DIAYKW 7
D+AY+W
Sbjct: 200 DLAYRW 205


>sp|Y3551_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 DIAYKW 7
D+AY+W
Sbjct: 200 DLAYRW 205


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SDIAYKWWRR 10
++IAYKW R
Sbjct: 2 NNIAYKWQTR 11


>sp|SYR_METKA|ARGININE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 DIAYKWWR 9
DIAY W+
Sbjct: 338 DIAYHLWK 345


>sp|AATA_THEPD|A-TYPE ATP synthase subunit A|Thermofilum pendens (strain DSM 2475

Query: 1 SDIAYKWW 8
+DI +WW
Sbjct: 441 ADIIERWW 448


>sp|SYFA_METS5|PHENYLALANINE--TRNA ligase alpha subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 DIAYKWWR 9
++ KWWR
Sbjct: 286 EVHEKWWR 293


>sp|CMR1_SACS2|CRISPR system CMR subunit Cmr1|Saccharolobus solfataricus (strain ATCC

Query: 5 YKWWRR 10
++WW R
Sbjct: 42 WRWWNR 47


>sp|RFCL_HALWD|REPLICATION factor C large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SDIAYKWWR 9
+D Y+WWR
Sbjct: 299 TDYNYRWWR 307


>sp|SYR_THESM|ARGININE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 DIAYKWWR 9
DIAY W+
Sbjct: 346 DIAYHLWK 353


>sp|KTHY_THEKO|PROBABLE thymidylate kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SDIAYKWWR 9
S +AY+W R
Sbjct: 103 SSLAYQWAR 111


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DIAYKWWR 9
DIAY W+
Sbjct: 335 DIAYHLWK 342


>sp|SYR_THEKO|ARGININE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DIAYKWWR 9
DIAY W+
Sbjct: 344 DIAYHLWK 351


Query: 1 SDIAYKWWRR 10
+D+ YK W R
Sbjct: 357 ADMLYKLWDR 366


>sp|KTHY_THEGJ|PROBABLE thymidylate kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 SDIAYKWWR 9
S +AY+W R
Sbjct: 105 SSLAYQWAR 113


>sp|SYR_ARCFU|ARGININE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DIAYKWWR 9
D+AY W+
Sbjct: 299 DLAYHMWK 306


>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DIAYKWWR 9
DIAY W+
Sbjct: 335 DIAYHLWK 342


>sp|PCKG_THESM|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus sibiricus (strain DSM 12597

Query: 6 KWWR 9
KWWR
Sbjct: 365 KWWR 368


>sp|SYR_PYRAB|ARGININE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 DIAYKWWR 9
DIAY W+
Sbjct: 335 DIAYHLWK 342


>sp|SYK_AERPE|LYSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 AYKWWRR 10
AYKW RR
Sbjct: 428 AYKWARR 434


>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 6 KWWR 9
KWWR
Sbjct: 365 KWWR 368


>sp|KTHY_PYRAB|PROBABLE thymidylate kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 SDIAYKWWR 9
S +AY+W R
Sbjct: 103 SSLAYQWAR 111


>sp|TMCA_AERPE|TRNA(MET) cytidine acetyltransferase TmcA|Aeropyrum pernix (strain ATCC

Query: 3 IAYKWWRR 10
+AY WRR
Sbjct: 228 LAYAAWRR 235


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 6 KWWR 9
KWWR
Sbjct: 362 KWWR 365


>sp|PCKG_PYRHO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus horikoshii (strain ATCC 700860

Query: 6 KWWR 9
KWWR
Sbjct: 362 KWWR 365


>sp|KTHY_PYRHO|PROBABLE thymidylate kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SDIAYKWWR 9
S +AY+W R
Sbjct: 103 SSLAYQWAR 111


>sp|KTHY_THESM|PROBABLE thymidylate kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 SDIAYKWWR 9
S +AY+W R
Sbjct: 105 SSLAYQWAR 113


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 6 KWWR 9
KWWR
Sbjct: 367 KWWR 370


>sp|KTHY_THEON|PROBABLE thymidylate kinase|Thermococcus onnurineus (strain NA1)

Query: 1 SDIAYKWWR 9
S +AY+W R
Sbjct: 103 SSLAYQWAR 111




76|SequenceR|385|376|HVELVSDIAY

>sp|RPO1C_METS5|DNA-DIRECTED RNA polymerase subunit Rpo1C|Metallosphaera sedula (strain ATCC

Query: 1 HVELVSDI 8
H+ELVSDI
Sbjct: 309 HIELVSDI 316


>sp|DAPF_METAR|DIAMINOPIMELATE epimerase|Methanocella arvoryzae (strain DSM 22066

Query: 1 HVELVSDIAY 10
++ VSDIAY
Sbjct: 251 NISFVSDIAY 260


>sp|CDC62_AERPE|ORC1-TYPE DNA replication protein 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 HVELVSDI 8
H+EL+SD+
Sbjct: 239 HLELISDV 246


>sp|RPO10_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo10|Thermoplasma acidophilum (strain

Query: 1 HVELVSDI 8
HV+L+S+I
Sbjct: 61 HVDLISEI 68


>sp|COST_HALSA|TRANSDUCER protein CosT|Halobacterium salinarum (strain ATCC 700922

Query: 2 VELVSDIA 9
V+L+SDIA
Sbjct: 618 VDLISDIA 625


>sp|COST_HALS3|TRANSDUCER protein CosT|Halobacterium salinarum (strain ATCC 29341

Query: 2 VELVSDIA 9
V+L+SDIA
Sbjct: 618 VDLISDIA 625




77|SequenceR|390|381|TYRRIHVELV

>sp|SPCS_METMP|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 TYRRIHVEL 9
TY +IH EL
Sbjct: 76 TYSKIHEEL 84


>sp|DPCKG_METKA|GTP-DEPENDENT dephospho-CoA kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 TYRRIHVE 8
TYRR+H E
Sbjct: 30 TYRRLHEE 37


>sp|CAPPA_PYRAE|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 TYRRIHVE 8
T RR+HVE
Sbjct: 288 TPRRLHVE 295


>sp|GCSPA_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 2 YRRIHVELV 10
YR IH EL+
Sbjct: 396 YREIHEELL 404


>sp|K6PF_METAC|ADP-SPECIFIC phosphofructokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 RIHVEL 9
RIHVEL
Sbjct: 277 RIHVEL 282


>sp|DNAG_AERPE|DNA primase DnaG|Aeropyrum pernix (strain ATCC 700893

Query: 4 RIHVEL 9
RIHVEL
Sbjct: 49 RIHVEL 54


>sp|RL34_SULTO|LARGE ribosomal subunit protein eL34|Sulfurisphaera tokodaii (strain

Query: 1 TYRRIHVEL 9
+YR+IH +L
Sbjct: 10 SYRKIHTKL 18




78|SequenceR|395|386|WSWMQTYRRI

>sp|MTRH_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanothermobacter marburgensis

Query: 1 WSWMQTYRR 9
W W++ Y++
Sbjct: 234 WDWLREYKK 242


>sp|MTRH_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanothermobacter

Query: 1 WSWMQTYRR 9
W W++ Y++
Sbjct: 234 WDWLREYKK 242


>sp|G1PDH_METTP|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothrix thermoacetophila (strain DSM

Query: 2 SWMQTYRRI 10
SWM+ RR+
Sbjct: 10 SWMELPRRV 18


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 3 WMQTYRR 9
W+Q YR+
Sbjct: 440 WIQEYRK 446


>sp|TRPA_AERPE|TRYPTOPHAN synthase alpha chain|Aeropyrum pernix (strain ATCC 700893

Query: 3 WMQTYRRI 10
W+ YRR+
Sbjct: 151 WLDRYRRL 158


>sp|IDI2_METTP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 WSWMQTYR 8
WS +++YR
Sbjct: 218 WSMVESYR 225




79|SequenceR|400|391|KKINSWSWMQ

>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 2 KINSWSWMQ 10
KI+ W W++
Sbjct: 269 KIDGWEWLE 277


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 2 KINSWSWMQ 10
KI+ W W++
Sbjct: 264 KIDGWDWLE 272


>sp|TRUD_PYRIL|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum islandicum (strain DSM

Query: 2 KINSWSWMQ 10
++ SW+W+
Sbjct: 56 RVGSWTWIH 64


>sp|FDHD_THEVO|SULFUR carrier protein FdhD|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KKINSWSWMQ 10
K+I+S+ W++
Sbjct: 17 KRIDSYGWLE 26


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 2 KINSWSWMQ 10
K++ W W++
Sbjct: 269 KMDGWDWLE 277


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 2 KINSWSWMQ 10
K++ W W++
Sbjct: 266 KMDGWDWLE 274


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 KINSWSWMQ 10
K++ W W++
Sbjct: 269 KMDGWDWLE 277


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 KINSWSWMQ 10
K++ W W++
Sbjct: 320 KVSRWGWIE 328


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 2 KINSWSWMQ 10
K+ W W++
Sbjct: 262 KLEGWDWLE 270


>sp|RIFK_METB6|RIBOFLAVIN kinase|Methanoregula boonei (strain DSM 21154

Query: 1 KKINSWSWM 9
KKI+S +W+
Sbjct: 145 KKIDSLTWI 153


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 INSWSWM 9
+ W+WM
Sbjct: 256 VERWTWM 262


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 INSWSWM 9
+ W+WM
Sbjct: 256 VERWTWM 262


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 INSWSWMQ 10
I+ W W++
Sbjct: 269 IDGWEWLK 276


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 2 KINSWSWMQ 10
+I W+W++
Sbjct: 269 EIEGWNWLK 277


>sp|DNLI2_KORCO|DNA ligase 2|Korarchaeum cryptofilum (strain OPF8)

Query: 3 INSWSWMQ 10
+ WSW++
Sbjct: 418 VRGWSWIK 425


>sp|RPO3_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus horikoshii (strain ATCC

Query: 1 KKINSW 6
KKIN W
Sbjct: 163 KKINGW 168


>sp|TRUD_PYRAE|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum aerophilum (strain ATCC

Query: 2 KINSWSWMQ 10
++ +W+W+
Sbjct: 56 RVGNWTWIH 64


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 2 KINSWSWMQ 10
K+ W W++
Sbjct: 265 KMEGWDWIE 273


>sp|TRUD_METTH|PROBABLE tRNA pseudouridine synthase D|Methanothermobacter

Query: 4 NSWSWMQ 10
N+W W++
Sbjct: 41 NTWIWIE 47


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 3 INSWSWMQ 10
I W+W++
Sbjct: 270 IEGWNWLK 277


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 2 KINSWSWM 9
K + W W+
Sbjct: 268 KFDGWEWL 275


>sp|T1M1_METJA|TYPE I restriction enzyme MjaVII|Methanocaldococcus jannaschii (strain

Query: 1 KKINSWSWMQ 10
K+ W+W+Q
Sbjct: 387 KQSADWAWVQ 396


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NSWSWM 9
NSW W+
Sbjct: 2506 NSWDWI 2511


>sp|ARLMC_PYRAB|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus abyssi (strain

Query: 3 INSWSW 8
+N W+W
Sbjct: 160 LNPWNW 165


>sp|T1M2_METJA|TYPE I restriction enzyme MjaVIII|Methanocaldococcus jannaschii (strain

Query: 1 KKINSWSWMQ 10
K W+W+Q
Sbjct: 388 KNSADWAWVQ 397




80|SequenceR|405|396|LLQRHKKINS

>sp|PIMT_METM5|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain C5 /

Query: 2 LQRHKKIN 9
L R+KKIN
Sbjct: 183 LMRYKKIN 190


>sp|ARGC_METST|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LLQRHKKIN 9
LL RH ++N
Sbjct: 22 LLTRHPRVN 30


>sp|Y1397_METJA|UNCHARACTERIZED protein MJ1397|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LQRHKK 7
+QRHKK
Sbjct: 322 MQRHKK 327




81|SequenceR|410|401|IKYSKLLQRH

>sp|GSA_METAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocella arvoryzae (strain DSM 22066

Query: 1 IKYSKLLQRH 10
+KY KL+Q++
Sbjct: 92 VKYGKLIQKY 101


>sp|GSA_ARCFU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IKYSKLLQRH 10
I+Y+KL+Q++
Sbjct: 92 IEYAKLIQKY 101


>sp|GGR_META3|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 IKYSKLLQR 9
+KY K+LQ+
Sbjct: 339 LKYKKVLQK 347


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 2 KYSKLLQR 9
K+SKLL R
Sbjct: 658 KFSKLLDR 665


>sp|GCH1_CALMQ|GTP cyclohydrolase 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 IKYSKLLQ 8
+KYS++LQ
Sbjct: 105 VKYSRMLQ 112


>sp|FAU1_STAMF|PROBABLE ribonuclease FAU-1|Staphylothermus marinus (strain ATCC 43588

Query: 1 IKYSKLLQRH 10
+ YS++L RH
Sbjct: 285 VDYSEILLRH 294


>sp|ATGT_THEVO|TRNA-GUANINE(15) transglycosylase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IKYSKLLQRH 10
++YSK+L+++
Sbjct: 340 MQYSKMLEKY 349


>sp|TOP3_SACS2|DNA topoisomerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IKYSKLLQRH 10
+ Y+K+L+R+
Sbjct: 427 VSYTKILERN 436




82|SequenceR|415|406|KNKYAIKYSK

>sp|G3P_PYRAE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KNKYAIKYSK 10
K KY IK++K
Sbjct: 94 KEKYYIKFNK 103


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 NKYAIKYSK 10
NKY IK++K
Sbjct: 958 NKYFIKFTK 966


>sp|PURT_METJA|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocaldococcus

Query: 2 NKYAIKY 8
NKYA KY
Sbjct: 329 NKYAPKY 335


>sp|RL34_SULAC|LARGE ribosomal subunit protein eL34|Sulfolobus acidocaldarius (strain

Query: 1 KNKYAIKYSK 10
KN Y KYSK
Sbjct: 48 KNNYTYKYSK 57


>sp|PIMT_METVS|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 NKYAIKYSK 10
N+Y IKY K
Sbjct: 180 NQYLIKYMK 188




83|SequenceR|420|411|KSQTLKNKYA

>sp|SUI1_CENSY|PROTEIN translation factor SUI1 homolog|Cenarchaeum symbiosum (strain A)

Query: 2 SQTLKNKYA 10
++ LKNKYA
Sbjct: 57 AKELKNKYA 65


>sp|RRP41_SULAC|EXOSOME complex component Rrp41|Sulfolobus acidocaldarius (strain ATCC

Query: 1 KSQTLKNKY 9
+ + LKNKY
Sbjct: 229 QKEALKNKY 237




84|SequenceR|425|416|IEESVKSQTL

>sp|PURA_HALMA|ADENYLOSUCCINATE synthetase|Haloarcula marismortui (strain ATCC 43049

Query: 1 IEESVKSQT 9
IEE +KS+T
Sbjct: 112 IEEELKSET 120


>sp|TYW1_PYRHO|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus horikoshii (strain ATCC

Query: 1 IEESVKSQ 8
+EES+K+Q
Sbjct: 111 VEESIKAQ 118


>sp|TYW1_PYRAB|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 IEESVKSQ 8
+EES+K+Q
Sbjct: 111 VEESIKAQ 118




85|SequenceR|430|421|QIEKQIEESV

>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QIEKQIEE 8
Q+EK+IEE
Sbjct: 232 QVEKEIEE 239


>sp|ACDB2_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 QIEKQIEES 9
++EKQ+EE+
Sbjct: 156 EVEKQLEEA 164




86|SequenceR|435|426|TKELDQIEKQ

>sp|Y165_METJA|UNCHARACTERIZED protein MJ0165|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ELDQIEKQ 10
LD+IEKQ
Sbjct: 18 SLDEIEKQ 25




87|SequenceR|440|431|NFVDLTKELD

>sp|Y439_METJA|UNCHARACTERIZED ATP-binding protein MJ0439|Methanocaldococcus jannaschii (strain

Query: 2 FVDLTKEL 9
FVDLTKEL
Sbjct: 177 FVDLTKEL 184


>sp|LYSY_PYRAE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 NFVDLTKELD 10
NFVD+ ELD
Sbjct: 295 NFVDIGFELD 304


>sp|EF1A_METMJ|ELONGATION factor 1-alpha|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 NFVDLTKELD 10
+FV+L K+LD
Sbjct: 349 SFVELMKKLD 358


>sp|Y3887_METAC|UPF0284 protein MA_3887|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NFVDLTKELD 10
+FV+LTK L+
Sbjct: 275 HFVELTKTLE 284


>sp|LYSY_PYRCJ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 NFVDLTKELD 10
N VDL ELD
Sbjct: 295 NLVDLGFELD 304


>sp|Y1659_METJA|UNCHARACTERIZED ATP-binding protein MJ1659|Methanocaldococcus jannaschii (strain

Query: 2 FVDLTKE 8
F+DLTKE
Sbjct: 179 FIDLTKE 185


>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 FVDLTKELD 10
FV+L K+LD
Sbjct: 350 FVELRKKLD 358


>sp|LYSY_PYRIL|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 NFVDLTKELD 10
N VDL ELD
Sbjct: 296 NIVDLGFELD 305


>sp|PURP_SACS2|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Saccharolobus solfataricus (strain ATCC

Query: 1 NFVDLTKEL 9
NFV TKEL
Sbjct: 253 NFVRTTKEL 261


>sp|WTPA_ARCFU|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NFVDLTKELD 10
NFV+L E+D
Sbjct: 246 NFVELPVEID 255


>sp|MTAP_THEKO|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FVDLTKELD 10
F+D TK+ D
Sbjct: 103 FIDFTKKRD 111


>sp|EF1A_METB6|ELONGATION factor 1-alpha|Methanoregula boonei (strain DSM 21154

Query: 2 FVDLTKELD 10
F++L K+LD
Sbjct: 350 FIELKKKLD 358


>sp|IF2B_PICTO|TRANSLATION initiation factor 2 subunit|Picrophilus torridus (strain ATCC

Query: 1 NFVDLTKELD 10
NF+D+T+ ++
Sbjct: 44 NFIDITEMMN 53


>sp|LYSY_PYRHO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 FVDLTKEL 9
F DLTKE+
Sbjct: 154 FKDLTKEV 161


>sp|PURP_SULTO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfurisphaera tokodaii (strain DSM

Query: 1 NFVDLTKEL 9
NFV+ KEL
Sbjct: 249 NFVNTVKEL 257


>sp|ADEC_METJA|ADENINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NFVDLTKELD 10
+FVDL E+D
Sbjct: 30 SFVDLNDEID 39


>sp|EF1A_METJA|ELONGATION factor 1-alpha|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FVDLTKELD 10
F++L K+LD
Sbjct: 354 FIELLKKLD 362


>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 VDLTKELD 10
+DLTKE++
Sbjct: 691 IDLTKEVN 698




88|SequenceR|445|436|RALIINFVDL

>sp|SYC_META3|CYSTEINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 LIINFVDL 10
LIINF D+
Sbjct: 63 LIINFTDI 70


>sp|SYC_PYRNV|CYSTEINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 LIINFVDL 10
L+INF D+
Sbjct: 62 LVINFTDI 69


>sp|SYC_PYRIL|CYSTEINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 LIINFVDL 10
L+INF D+
Sbjct: 62 LVINFTDI 69


>sp|SYC_PYRAR|CYSTEINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 LIINFVDL 10
L+INF D+
Sbjct: 62 LVINFTDI 69


>sp|SYC_PYRAE|CYSTEINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 LIINFVDL 10
L+INF D+
Sbjct: 64 LVINFTDI 71


>sp|SYC_METMP|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 LIINFVDL 10
L+INF D+
Sbjct: 63 LVINFTDI 70


>sp|SYC_METM7|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 LIINFVDL 10
L+INF D+
Sbjct: 63 LVINFTDI 70


>sp|SYC_METM6|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 LIINFVDL 10
L+INF D+
Sbjct: 63 LVINFTDI 70


>sp|SYC_METVS|CYSTEINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 LIINFVDL 10
L+INF D+
Sbjct: 63 LVINFTDI 70


>sp|SYC_PYRCJ|CYSTEINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 LIINFVDL 10
L++NF D+
Sbjct: 62 LVVNFTDI 69


>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 2 ALIINFVDL 10
AL IN++DL
Sbjct: 333 ALGINYIDL 341




89|SequenceR|450|441|VQAQQRALII

***** No hits found ******


90|SequenceR|455|446|SRIVEVQAQQ

>sp|EF1A_STAMF|ELONGATION factor 1-alpha|Staphylothermus marinus (strain ATCC 43588

Query: 1 SRIVEVQAQ 9
SRIVE++A+
Sbjct: 357 SRIVEIKAK 365




91|SequenceR|460|451|RLKQGSRIVE

>sp|Y189_METAR|UPF0313 protein UNCMA_01890|Methanocella arvoryzae (strain DSM 22066

Query: 1 RLKQGSRIVE 10
RLK G RI +
Sbjct: 176 RLKNGERIAD 185


>sp|RL4_METMJ|LARGE ribosomal subunit protein uL4|Methanoculleus marisnigri (strain

Query: 1 RLKQGSRIV 9
RLK GSR+
Sbjct: 72 RLKNGSRVA 80


>sp|YR33_THEPE|UNCHARACTERIZED 33.4 kDa protein in|Thermofilum pendens

Query: 1 RLKQGSR 7
RLK+GSR
Sbjct: 209 RLKEGSR 215


>sp|DCD_HALMA|DCTP deaminase|Haloarcula marismortui (strain ATCC 43049

Query: 1 RLKQGSRIVE 10
RL+QG +VE
Sbjct: 11 RLEQGDLVVE 20


>sp|SYH_PICTO|HISTIDINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 RLKQGSRIVE 10
RLK G+ +VE
Sbjct: 51 RLKSGTELVE 60


>sp|RIFK_METAC|RIBOFLAVIN kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RLKQGSRIV 9
+LK G RIV
Sbjct: 217 KLKDGDRIV 225


>sp|CAS1_HALVD|CRISPR-ASSOCIATED endonuclease Cas1|Haloferax volcanii (strain ATCC 29605

Query: 1 RLKQGSRIVE 10
RL+ G RI+E
Sbjct: 102 RLRIGHRIIE 111




92|SequenceR|465|456|DASKKRLKQG

>sp|RL18_THEPD|LARGE ribosomal subunit protein uL18|Thermofilum pendens (strain DSM

Query: 2 ASKKRLKQG 10
A+KK LKQG
Sbjct: 89 AAKKALKQG 97


>sp|SYFA_SULTO|PHENYLALANINE--TRNA ligase alpha subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DASKKRLKQG 10
D K+RLK+G
Sbjct: 62 DEGKRRLKEG 71




93|SequenceR|470|461|RKEGTDASKK

>sp|RS15_METB6|SMALL ribosomal subunit protein uS15|Methanoregula boonei (strain DSM

Query: 1 RKEGTDAS 8
RKEGT AS
Sbjct: 41 RKEGTSAS 48


>sp|RL23_METJA|LARGE ribosomal subunit protein uL23|Methanocaldococcus jannaschii

Query: 2 KEGTDASK 9
KEG DASK
Sbjct: 71 KEGYDASK 78


>sp|ASSY_IGNH4|ARGININOSUCCINATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 RKEGTDA 7
RKEG DA
Sbjct: 105 RKEGADA 111




94|SequenceR|475|466|SFWGGRKEGT

>sp|CDVB2_SULAC|CELL division protein B2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 WGGRKEGT 10
WGGR+E T
Sbjct: 11 WGGRQEPT 18


>sp|IF2B_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain

Query: 5 GRKEGT 10
GRKEGT
Sbjct: 22 GRKEGT 27


>sp|IF2B_SACI7|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 5 GRKEGT 10
GRKEGT
Sbjct: 22 GRKEGT 27


>sp|IF2B_SACI6|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 5 GRKEGT 10
GRKEGT
Sbjct: 22 GRKEGT 27


>sp|IF2B_SACI4|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 5 GRKEGT 10
GRKEGT
Sbjct: 22 GRKEGT 27


>sp|IF2B_SACI3|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 5 GRKEGT 10
GRKEGT
Sbjct: 22 GRKEGT 27


>sp|IF2B_SACI2|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 5 GRKEGT 10
GRKEGT
Sbjct: 22 GRKEGT 27


>sp|IF2B_SACI1|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 5 GRKEGT 10
GRKEGT
Sbjct: 22 GRKEGT 27


>sp|TTUA_PYRHO|TRNA-5-METHYLURIDINE(54) 2-sulfurtransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 FWGGRKE 8
FWG +KE
Sbjct: 289 FWGLKKE 295


>sp|SAHH_PYRFU|ADENOSYLHOMOCYSTEINASE furiosus (strain ATCC 43587

Query: 3 WGGRKEGT 10
WGG +E T
Sbjct: 148 WGGSEETT 155


>sp|SAHH_PYRHO|ADENOSYLHOMOCYSTEINASE horikoshii (strain ATCC 700860

Query: 3 WGGRKEGT 10
WGG +E T
Sbjct: 148 WGGSEETT 155


>sp|AROA_PYRFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 WGGRKEG 9
WGG+ +G
Sbjct: 350 WGGQPKG 356


>sp|SFSA_SACI6|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 2 FWGGRKEG 9
FW KEG
Sbjct: 204 FWNSIKEG 211


>sp|SFSA_SACI4|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 2 FWGGRKEG 9
FW KEG
Sbjct: 204 FWNSIKEG 211


>sp|SFSA_SACI3|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 2 FWGGRKEG 9
FW KEG
Sbjct: 204 FWNSIKEG 211


>sp|RS19E_ARCFU|SMALL ribosomal subunit protein eS19|Archaeoglobus fulgidus (strain

Query: 1 SFWGGRK 7
+F+GGRK
Sbjct: 73 TFYGGRK 79


>sp|RLME_ARCFU|RIBOSOMAL RNA large subunit methyltransferase|Archaeoglobus fulgidus

Query: 2 FWGGRKEG 9
+W +KEG
Sbjct: 9 YWKAKKEG 16


>sp|TSGAD_HALVD|PUTATIVE ABC transporter glucose-binding protein|Haloferax volcanii (strain

Query: 1 SFWGGRKEG 9
+FWGG + G
Sbjct: 319 AFWGGMETG 327




95|SequenceR|480|471|KGWLGSFWGG

>sp|PRIS_SULTO|DNA primase small subunit PriS|Sulfurisphaera tokodaii (strain DSM

Query: 1 KGWLGS 6
KGWLGS
Sbjct: 85 KGWLGS 90


>sp|PRIS_SULAC|DNA primase small subunit PriS|Sulfolobus acidocaldarius (strain ATCC

Query: 1 KGWLGS 6
KGWLGS
Sbjct: 90 KGWLGS 95


Query: 2 GWLGSFWGG 10
GWLG F G
Sbjct: 213 GWLGRFARG 221


>sp|HIS6_THEGJ|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus gammatolerans

Query: 3 WLGSFW 8
W GSFW
Sbjct: 133 WNGSFW 138


>sp|PRIS_STAMF|DNA primase small subunit PriS|Staphylothermus marinus (strain ATCC

Query: 1 KGWLGS 6
KGW+GS
Sbjct: 89 KGWIGS 94


>sp|PRIS_PYRNV|DNA primase small subunit PriS|Pyrobaculum neutrophilum (strain DSM

Query: 1 KGWLGS 6
KGWLG+
Sbjct: 78 KGWLGA 83


>sp|PRIS_PYRIL|DNA primase small subunit PriS|Pyrobaculum islandicum (strain DSM

Query: 1 KGWLGS 6
KGWLG+
Sbjct: 78 KGWLGA 83


>sp|PRIS_PYRCJ|DNA primase small subunit PriS|Pyrobaculum calidifontis (strain DSM

Query: 1 KGWLGS 6
KGWLG+
Sbjct: 78 KGWLGA 83


>sp|PRIS_PYRAR|DNA primase small subunit PriS|Pyrobaculum arsenaticum (strain DSM

Query: 1 KGWLGS 6
KGWLG+
Sbjct: 78 KGWLGA 83


>sp|PRIS_ARCFU|DNA primase small subunit PriS|Archaeoglobus fulgidus (strain ATCC

Query: 1 KGWLGS 6
KGWLG+
Sbjct: 86 KGWLGA 91


>sp|PRIS_AERPE|DNA primase small subunit PriS|Aeropyrum pernix (strain ATCC 700893

Query: 1 KGWLGS 6
KGWLGS
Sbjct: 87 KGWLGS 92


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 WLGSFWG 9
WLG F+G
Sbjct: 185 WLGYFFG 191


>sp|MCRX_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 3 WLGSFWGG 10
WLGS+ G
Sbjct: 321 WLGSYMSG 328


>sp|MCRX_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 3 WLGSFWGG 10
WLGS+ G
Sbjct: 321 WLGSYMSG 328


>sp|HIS6_THEKO|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus kodakarensis

Query: 3 WLGSFW 8
W GSFW
Sbjct: 133 WNGSFW 138


>sp|AROD_METJA|3-DEHYDROQUINATE dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WLGSFWGG 10
W G +W G
Sbjct: 59 WEGGYWKG 66


>sp|TRM1_METM5|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 KGWLGSFWGG 10
KG+ GSF+ G
Sbjct: 260 KGYAGSFYLG 269


>sp|MCRX_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 3 WLGSFWGG 10
WLGS+ G
Sbjct: 322 WLGSYMSG 329


>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 3 WLGSFW 8
WLG W
Sbjct: 279 WLGKIW 284


>sp|MCRA_METTH|METHYL-COENZYME M reductase subunit alpha|Methanothermobacter thermautotrophicus

Query: 3 WLGSFWGG 10
WLGS+ G
Sbjct: 319 WLGSYMSG 326


>sp|MCRX_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 3 WLGSFWGG 10
WLGS+ G
Sbjct: 321 WLGSYMSG 328


>sp|MCRA_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 3 WLGSFWGG 10
WLGS+ G
Sbjct: 319 WLGSYMSG 326


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 LGSFWG 9
+G+FWG
Sbjct: 456 VGAFWG 461


>sp|DNLI2_KORCO|DNA ligase 2|Korarchaeum cryptofilum (strain OPF8)

Query: 4 LGSFWG 9
+G+FWG
Sbjct: 443 VGAFWG 448


>sp|MCRA_METVO|METHYL-COENZYME M reductase subunit alpha|Methanococcus voltae

Query: 3 WLGSFWGG 10
WLGS+ G
Sbjct: 323 WLGSYMSG 330


>sp|MCRA_METKA|METHYL-COENZYME M reductase I subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 WLGSFWGG 10
WLGS+ G
Sbjct: 322 WLGSYMSG 329


>sp|MCRA_METBF|METHYL-COENZYME M reductase subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 3 WLGSFWGG 10
WLGS+ G
Sbjct: 332 WLGSYMSG 339


>sp|MCRA_METFE|METHYL-COENZYME M reductase subunit alpha|Methanothermus fervidus

Query: 3 WLGSFWGG 10
WLGS+ G
Sbjct: 322 WLGSYMSG 329


>sp|MCRA_METAC|METHYL-COENZYME M reductase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 3 WLGSFWGG 10
WLGS+ G
Sbjct: 332 WLGSYMSG 339


>sp|Y1375_METJA|UNCHARACTERIZED membrane protein MJ1375|Methanocaldococcus jannaschii (strain ATCC

Query: 4 LGSFWGG 10
+G FW G
Sbjct: 249 MGGFWSG 255


>sp|RFCS_PYRFU|REPLICATION factor C small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 WLGSFWG 9
WLG F G
Sbjct: 183 WLGYFMG 189


>sp|HIS6_PYRFU|IMIDAZOLE glycerol phosphate synthase subunit|Pyrococcus furiosus (strain

Query: 3 WLGSFW 8
W G FW
Sbjct: 133 WNGKFW 138


>sp|DNLI_METJA|DNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KGWLGSF 7
K W GSF
Sbjct: 461 KDWYGSF 467


>sp|CAPPA_PYRHO|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KGWLGSFW 8
K W+G F+
Sbjct: 162 KEWIGEFY 169


>sp|CAPPA_PYRAB|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 KGWLGSFW 8
K W+G F+
Sbjct: 162 KEWIGEFY 169


>sp|CBIZ_HALSA|ADENOSYLCOBINAMIDE amidohydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 3 WLGSFWGG 10
WL + W G
Sbjct: 20 WLSTGWNG 27


>sp|PURA_ARCFU|ADENYLOSUCCINATE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LGSFWG 9
+G FWG
Sbjct: 7 VGGFWG 12




96|SequenceR|485|476|KKSEKKGWLG

>sp|PRIS_SULAC|DNA primase small subunit PriS|Sulfolobus acidocaldarius (strain ATCC

Query: 1 KKSEKKGWLG 10
K+ E+KGWLG
Sbjct: 85 KEMEQKGWLG 94


>sp|PRIS_SULTO|DNA primase small subunit PriS|Sulfurisphaera tokodaii (strain DSM

Query: 1 KKSEKKGWLG 10
K+ ++KGWLG
Sbjct: 80 KEMDEKGWLG 89


>sp|PRIS_PYRNV|DNA primase small subunit PriS|Pyrobaculum neutrophilum (strain DSM

Query: 4 EKKGWLG 10
E+KGWLG
Sbjct: 76 ERKGWLG 82


>sp|PRIS_ARCFU|DNA primase small subunit PriS|Archaeoglobus fulgidus (strain ATCC

Query: 2 KSEKKGWLG 10
K E KGWLG
Sbjct: 82 KMENKGWLG 90


>sp|PRIS_AERPE|DNA primase small subunit PriS|Aeropyrum pernix (strain ATCC 700893

Query: 1 KKSEKKGWLG 10
+ E+KGWLG
Sbjct: 82 RSMEEKGWLG 91


>sp|PRIS_PYRIL|DNA primase small subunit PriS|Pyrobaculum islandicum (strain DSM

Query: 4 EKKGWLG 10
E+KGWLG
Sbjct: 76 ERKGWLG 82


>sp|PRIS_PYRCJ|DNA primase small subunit PriS|Pyrobaculum calidifontis (strain DSM

Query: 4 EKKGWLG 10
E+KGWLG
Sbjct: 76 ERKGWLG 82


>sp|PRIS_PYRAR|DNA primase small subunit PriS|Pyrobaculum arsenaticum (strain DSM

Query: 4 EKKGWLG 10
++KGWLG
Sbjct: 76 DRKGWLG 82


>sp|PRIS_PYRAE|DNA primase small subunit PriS|Pyrobaculum aerophilum (strain ATCC

Query: 4 EKKGWLG 10
E+KGW+G
Sbjct: 76 ERKGWIG 82


>sp|MFNA_METKA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanopyrus kandleri (strain

Query: 1 KKSEKKGW 8
++SE++GW
Sbjct: 328 RESEREGW 335


>sp|IPYR_METTH|INORGANIC pyrophosphatase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 KKSEKKGWLG 10
KK+E GW G
Sbjct: 146 KKTETLGWEG 155


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 SEKKGWL 9
SE+KGW+
Sbjct: 483 SEEKGWV 489


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 SEKKGWL 9
SE+KGW+
Sbjct: 483 SEEKGWV 489


>sp|PRIS_SACS2|DNA primase small subunit PriS|Saccharolobus solfataricus (strain

Query: 1 KKSEKKGWLG 10
+ E+K W+G
Sbjct: 86 RNMEEKAWMG 95


>sp|DHAS_METJA|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KSEKKGWLG 10
+ EK+GW G
Sbjct: 141 QREKRGWDG 149


>sp|PRIS_PICTO|DNA primase small subunit PriS|Picrophilus torridus (strain ATCC

Query: 1 KKSEKKGWLG 10
K+ EKK W G
Sbjct: 77 KRMEKKIWEG 86


>sp|PRIS_SACI7|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 4 EKKGWLG 10
E+K W+G
Sbjct: 89 EEKAWMG 95


>sp|PRIS_SACI6|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 4 EKKGWLG 10
E+K W+G
Sbjct: 89 EEKAWMG 95


>sp|PRIS_SACI4|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 4 EKKGWLG 10
E+K W+G
Sbjct: 89 EEKAWMG 95


>sp|PRIS_SACI3|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 4 EKKGWLG 10
E+K W+G
Sbjct: 89 EEKAWMG 95


>sp|PRIS_SACI2|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 4 EKKGWLG 10
E+K W+G
Sbjct: 89 EEKAWMG 95


>sp|PRIS_SACI1|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 4 EKKGWLG 10
E+K W+G
Sbjct: 89 EEKAWMG 95


>sp|MTRA1_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 1|Methanothermobacter marburgensis

Query: 1 KKSEKKGW 8
KKS +GW
Sbjct: 4 KKSPAEGW 11


>sp|MTRA1_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 1|Methanothermobacter

Query: 1 KKSEKKGW 8
KKS +GW
Sbjct: 4 KKSPAEGW 11


>sp|FAU1_THEGJ|PROBABLE ribonuclease FAU-1|Thermococcus gammatolerans (strain DSM 15229

Query: 2 KSEKKGWL 9
K KKGWL
Sbjct: 316 KGPKKGWL 323


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 3 SEKKGWL 9
+E+KGW+
Sbjct: 484 AEEKGWM 490


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 SEKKGWL 9
+E+KGW+
Sbjct: 484 AEEKGWM 490


>sp|FAU1_THEKO|PROBABLE ribonuclease FAU-1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KSEKKGWL 9
K KKGWL
Sbjct: 316 KGPKKGWL 323


>sp|TFE_CENSY|TRANSCRIPTION factor E|Cenarchaeum symbiosum (strain A)

Query: 2 KSEKKGWL 9
K E+KGW
Sbjct: 69 KDERKGWF 76


>sp|GALE_METJA|PUTATIVE UDP-glucose 4-epimerase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KKSEKKGW 8
KK+E GW
Sbjct: 275 KKAESLGW 282


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 SEKKGWL 9
+E+KGW+
Sbjct: 484 AEEKGWM 490


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 3 SEKKGWL 9
+E+KGW+
Sbjct: 484 AEEKGWM 490




97|SequenceR|490|481|SEEDKKKSEK

>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SEEDKKKSEK 10
SEED++++EK
Sbjct: 460 SEEDRRQAEK 469


>sp|IF6_HYPBU|TRANSLATION initiation factor 6|Hyperthermus butylicus (strain DSM 5456

Query: 1 SEEDKKKSEK 10
+E+DKKK E+
Sbjct: 31 TEKDKKKIEE 40




98|SequenceR|495|486|TEPILSEEDK

>sp|Y614_METJA|UNCHARACTERIZED protein MJ0614|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EPILSEED 9
EPI++EED
Sbjct: 38 EPIVAEED 45


>sp|RS9_THEAC|SMALL ribosomal subunit protein uS9|Thermoplasma acidophilum (strain

Query: 2 EPILSEEDK 10
EP+L EDK
Sbjct: 44 EPLLIAEDK 52


>sp|CPGS_THEKO|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus kodakarensis

Query: 2 EPILSEEDK 10
EP+L+ ED+
Sbjct: 79 EPVLTYEDR 87


>sp|GCSPB_HALSA|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 2 EPILSEEDK 10
EP+LSE D+
Sbjct: 18 EPLLSENDQ 26


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TEPILSEE 8
+EPILSE+
Sbjct: 32 SEPILSED 39


>sp|CPGS_THEON|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus onnurineus (strain

Query: 2 EPILSEEDK 10
EP+L+ ED+
Sbjct: 79 EPVLNYEDR 87


>sp|CPGS_THESM|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus sibiricus (strain

Query: 2 EPILSEEDK 10
EP+L+ ED+
Sbjct: 79 EPVLNYEDR 87


>sp|COFC_METKA|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 3 PILSEED 9
P+LSEED
Sbjct: 88 PLLSEED 94




99|SequenceR|500|491|MLDDITEPIL

>sp|AATB_PYRAR|A-TYPE ATP synthase subunit B|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 312 DDITHPI 318


>sp|AATB_HYPBU|A-TYPE ATP synthase subunit B|Hyperthermus butylicus (strain DSM 5456

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 317 DDITHPI 323


>sp|AATB_PYRNV|A-TYPE ATP synthase subunit B|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 312 DDITHPI 318


>sp|AATB_PYRCJ|A-TYPE ATP synthase subunit B|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 312 DDITHPI 318


>sp|AATB_IGNH4|A-TYPE ATP synthase subunit B|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 315 DDITHPI 321


>sp|AATB_METTL|A-TYPE ATP synthase subunit B|Methanothermococcus thermolithotrophicus

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 246 DDITHPI 252


>sp|AATB_PYRIL|A-TYPE ATP synthase subunit B|Pyrobaculum islandicum (strain DSM 4184

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 312 DDITHPI 318


>sp|AATB_METMA|A-TYPE ATP synthase subunit B|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 308 DDITHPI 314


>sp|AATB_AERPE|A-TYPE ATP synthase subunit B|Aeropyrum pernix (strain ATCC 700893

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 312 DDITHPI 318


>sp|AATB_PYRAE|A-TYPE ATP synthase subunit B|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 312 DDITHPI 318


>sp|AATB_CENSY|A-TYPE ATP synthase subunit B|Cenarchaeum symbiosum (strain A)

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 313 DDITHPI 319


>sp|KHSE_PYRCJ|HOMOSERINE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 MLDDITEP 8
M DD+ EP
Sbjct: 215 MSDDVVEP 222


>sp|AATB_METKA|A-TYPE ATP synthase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 833 DDITHPI 839


>sp|AATB_METJA|A-TYPE ATP synthase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 314 DDITHPI 320


>sp|DNLI2_KORCO|DNA ligase 2|Korarchaeum cryptofilum (strain OPF8)

Query: 2 LDDITEP 8
L+DITEP
Sbjct: 275 LEDITEP 281


>sp|AATB_META3|A-TYPE ATP synthase subunit B|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 314 DDITHPI 320


>sp|AATB_METAC|A-TYPE ATP synthase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 308 DDITHPI 314


>sp|AATB_STAMF|A-TYPE ATP synthase subunit B|Staphylothermus marinus (strain ATCC 43588

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 315 DDITHPI 321


>sp|RL24_CENSY|LARGE ribosomal subunit protein uL24|Cenarchaeum symbiosum (strain A)

Query: 2 LDDITEP 8
+DD TEP
Sbjct: 140 IDDATEP 146


>sp|AATB_NITMS|A-TYPE ATP synthase subunit B|Nitrosopumilus maritimus (strain SCM1)

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 313 DDITHPI 319


>sp|AATB_SACS2|A-TYPE ATP synthase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 311 DDITHPI 317


>sp|AATB_SACI7|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 311 DDITHPI 317


>sp|AATB_SACI6|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.4 /

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 311 DDITHPI 317


>sp|AATB_SACI4|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.14.25 /

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 311 DDITHPI 317


>sp|AATB_SACI3|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.27)

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 311 DDITHPI 317


>sp|AATB_SACI2|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 311 DDITHPI 317


>sp|AATB_SACI1|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 311 DDITHPI 317


>sp|AATB_METBA|A-TYPE ATP synthase subunit B|Methanosarcina barkeri

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 308 DDITHPI 314


>sp|AATB_SULAC|A-TYPE ATP synthase subunit B|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 314 DDITHPI 320


>sp|AATB_METS5|A-TYPE ATP synthase subunit B|Metallosphaera sedula (strain ATCC 51363

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 314 DDITHPI 320


>sp|AATB_METBF|A-TYPE ATP synthase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 308 DDITHPI 314


>sp|AATB_PYRHO|A-TYPE ATP synthase subunit B|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 312 DDITHPI 318


>sp|AATB_THEON|A-TYPE ATP synthase subunit B|Thermococcus onnurineus (strain NA1)

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 312 DDITHPI 318


>sp|AATB_THEGJ|A-TYPE ATP synthase subunit B|Thermococcus gammatolerans (strain DSM 15229

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 310 DDITHPI 316


>sp|AATB_METPE|A-TYPE ATP synthase subunit B|Methanosphaerula palustris (strain ATCC

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 307 DDITHPI 313


>sp|AATB_METAR|A-TYPE ATP synthase subunit B|Methanocella arvoryzae (strain DSM 22066

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 307 DDITHPI 313


>sp|AATB_PYRAB|A-TYPE ATP synthase subunit B|Pyrococcus abyssi (strain GE5 /

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 309 DDITHPI 315


>sp|AATB_METLZ|A-TYPE ATP synthase subunit B|Methanocorpusculum labreanum (strain ATCC

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 307 DDITHPI 313


>sp|AATB_DESSY|A-TYPE ATP synthase subunit B|Desulfurococcus sp. (strain SY)

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 310 DDITHPI 316


>sp|AATB_ARCFU|A-TYPE ATP synthase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 307 DDITHPI 313


>sp|Y73A_ARCFU|UPF0146 protein AF_0739.1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LDDITEPIL 10
+DD+T+P L
Sbjct: 58 VDDVTKPNL 66


>sp|AATB_THESI|A-TYPE ATP synthase subunit B|Thermococcus sp. (strain KI)

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 310 DDITHPI 316


>sp|AATB_THEKO|A-TYPE ATP synthase subunit B|Thermococcus kodakarensis (strain ATCC

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 312 DDITHPI 318


>sp|AATB_PYRFU|A-TYPE ATP synthase subunit B|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 309 DDITHPI 315


>sp|AATB_METTP|A-TYPE ATP synthase subunit B|Methanothrix thermoacetophila (strain DSM

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 308 DDITHPI 314


>sp|AATB_METVS|A-TYPE ATP synthase subunit B|Methanococcus vannielii (strain ATCC 35089

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 314 DDITHPI 320


>sp|AATB1_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 307 DDITHPI 313


>sp|AATB_METMJ|A-TYPE ATP synthase subunit B|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 307 DDITHPI 313


>sp|AATB_METB6|A-TYPE ATP synthase subunit B|Methanoregula boonei (strain DSM 21154

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 307 DDITHPI 313


>sp|AATB_METM5|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C5 /

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 314 DDITHPI 320


>sp|AATB_METBU|A-TYPE ATP synthase subunit B|Methanococcoides burtonii (strain DSM 6242

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 308 DDITHPI 314


>sp|AATB_METM7|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C7 /

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 314 DDITHPI 320


>sp|AATB_METTH|A-TYPE ATP synthase subunit B|Methanothermobacter thermautotrophicus

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 314 DDITHPI 320


>sp|AATB_METMP|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain DSM 14266

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 314 DDITHPI 320


>sp|AATB_METM6|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C6 /

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 314 DDITHPI 320


>sp|AATB_PICTO|A-TYPE ATP synthase subunit B|Picrophilus torridus (strain ATCC 700027

Query: 3 DDITEPI 9
DDIT P+
Sbjct: 310 DDITNPV 316


>sp|AATB_METST|A-TYPE ATP synthase subunit B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 315 DDITHPI 321


>sp|AATB_METS3|A-TYPE ATP synthase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 3 DDITEPI 9
DDIT PI
Sbjct: 314 DDITHPI 320


>sp|Y130_ARCFU|PROBABLE deacetylase AF_0130|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MLDDITEPIL 10
++D+I EP++
Sbjct: 225 VIDEIIEPVV 234


>sp|AATB_THEAC|A-TYPE ATP synthase subunit B|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 DDITEPI 9
DDIT P+
Sbjct: 310 DDITHPV 316


>sp|AATB_THEVO|A-TYPE ATP synthase subunit B|Thermoplasma volcanium (strain ATCC 51530

Query: 3 DDITEPI 9
DDIT P+
Sbjct: 310 DDITHPV 316


>sp|AATB3_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 DDITEPI 9
DDIT P+
Sbjct: 313 DDITHPV 319


>sp|AATB2_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 DDITEPI 9
DDIT P+
Sbjct: 315 DDITHPV 321


>sp|ACDG_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit gamma|Archaeoglobus fulgidus

Query: 1 MLDDITEPI 9
+LD +TEP+
Sbjct: 239 VLDPVTEPL 247


>sp|TPIS_HALMA|TRIOSEPHOSPHATE isomerase|Haloarcula marismortui (strain ATCC 43049

Query: 2 LDDITEPIL 10
L+D+ EP+L
Sbjct: 207 LEDLVEPLL 215


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii (strain

Query: 2 LDDITEPIL 10
LD+ITE I+
Sbjct: 360 LDEITEKIM 368


>sp|ATGT_HALMA|TRNA-GUANINE(15) transglycosylase|Haloarcula marismortui (strain ATCC 43049

Query: 3 DDITEPIL 10
DD+ EP+L
Sbjct: 68 DDLREPVL 75




100|SequenceR|505|496|KEEPTMLDDI

>sp|HDRB2_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit B2|Methanococcus

Query: 2 EEPTMLDDI 10
E PTMLD++
Sbjct: 168 EHPTMLDEL 176


>sp|THYX_SULAC|FLAVIN-DEPENDENT thymidylate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KEEPTMLDDI 10
+E P LDDI
Sbjct: 211 RENPITLDDI 220


>sp|HDRB_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit B|Methanothermobacter

Query: 2 EEPTMLDDI 10
E PT+LD+I
Sbjct: 168 ERPTILDEI 176


>sp|TSAC_METJA|PUTATIVE threonylcarbamoyl-AMP synthase|Methanocaldococcus jannaschii

Query: 1 KEEPTMLDDI 10
KE PT +D+I
Sbjct: 149 KESPTTVDEI 158


>sp|ARSA_HALSA|PUTATIVE arsenical pump-driving ATPase|Halobacterium salinarum (strain ATCC

Query: 1 KEEPTMLDDI 10
+EEP LDD+
Sbjct: 611 QEEPVGLDDL 620


>sp|AGL10_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl10|Haloferax volcanii

Query: 1 KEEPTMLDDI 10
K + TMLDD+
Sbjct: 11 KVQQTMLDDL 20


>sp|MCRX_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 1 KEEPTMLDD 9
+E PT+L+D
Sbjct: 389 EEYPTLLED 397


>sp|MCRX_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 KEEPTMLDD 9
+E PT+L+D
Sbjct: 388 EEYPTLLED 396


>sp|CCA_AERPE|CCA-ADDING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 KEEPTMLDDI 10
+E P ++DDI
Sbjct: 158 EERPWLVDDI 167


>sp|MCRX_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 KEEPTMLDD 9
+E PT+L+D
Sbjct: 388 EEYPTLLED 396


>sp|HDRB_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit B|Methanothermobacter

Query: 2 EEPTMLDDI 10
E PT+LD++
Sbjct: 168 ERPTILDEL 176


>sp|KHSE_METKA|HOMOSERINE kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 KEEPTMLDDI 10
+E P LDD+
Sbjct: 184 RERPPSLDDV 193




101|SequenceR|510|501|TFLKDKEEPT

>sp|ARAT2_THELN|AROMATIC-AMINO-ACID aminotransferase 2|Thermococcus litoralis (strain ATCC 51850

Query: 1 TFLKDKEE 8
TFLKD EE
Sbjct: 106 TFLKDNEE 113


>sp|ACDB2_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 TFLKDKEEPT 10
TFLK+K P
Sbjct: 387 TFLKEKNHPV 396


>sp|NDRZ_THEAC|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Thermoplasma

Query: 3 LKDKEEPT 10
LKDKE P+
Sbjct: 50 LKDKERPS 57


>sp|SRP19_AERPE|SIGNAL recognition particle 19 kDa|Aeropyrum pernix (strain ATCC 700893

Query: 2 FLKDKEEPT 10
FL++KE P+
Sbjct: 3 FLREKEGPS 11


>sp|HELS_METMA|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FLKDKEEP 9
+ KDKE+P
Sbjct: 216 YCKDKEKP 223




102|SequenceR|515|506|SYGIATFLKD

>sp|ARAT2_THELN|AROMATIC-AMINO-ACID aminotransferase 2|Thermococcus litoralis (strain ATCC 51850

Query: 3 GIATFLKD 10
G+ATFLKD
Sbjct: 103 GLATFLKD 110


>sp|RSMA_NATPD|PROBABLE ribosomal RNA small subunit|Natronomonas pharaonis (strain ATCC

Query: 3 GIATFLKD 10
G+ATFL D
Sbjct: 75 GLATFLTD 82


>sp|PGP_METKA|PHOSPHOGLYCOLATE phosphatase|Methanopyrus kandleri (strain AV19 /

Query: 3 GIATFLK 9
G+ATFL+
Sbjct: 218 GVATFLR 224


>sp|LONB_METTH|ARCHAEAL Lon protease|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 YGIATFLKD 10
YG F+KD
Sbjct: 316 YGYEVFMKD 324




103|SequenceR|520|511|NHTSESYGIA

>sp|RNZ_SULAC|RIBONUCLEASE Z|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 HTSESYG 8
HT ESYG
Sbjct: 132 HTIESYG 138


>sp|COAD_METMA|PHOSPHOPANTETHEINE adenylyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NHTSESYGI 9
NH+ ESY I
Sbjct: 46 NHSVESYKI 54


>sp|RNZ_IGNH4|RIBONUCLEASE Z|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 NHTSESYGIA 10
NHT ++G++
Sbjct: 139 NHTVPAFGVS 148


>sp|HTR4_HALSA|TRANSDUCER protein Htr4|Halobacterium salinarum (strain ATCC 700922

Query: 3 TSESYGIA 10
TSE+YG+A
Sbjct: 284 TSEAYGLA 291


>sp|HTR4_HALS3|TRANSDUCER protein Htr4|Halobacterium salinarum (strain ATCC 29341

Query: 3 TSESYGIA 10
TSE+YG+A
Sbjct: 284 TSEAYGLA 291




104|SequenceR|525|516|KPLTLNHTSE

>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PLTLNHTSE 10
P+TL H+ E
Sbjct: 352 PITLTHSRE 360


>sp|SURE_HALMA|5'-NUCLEOTIDASE SurE|Haloarcula marismortui (strain ATCC 43049

Query: 2 PLTLNHTSE 10
PLT HT+E
Sbjct: 239 PLTAPHTTE 247


>sp|TMBL1_PYRFU|HTH-TYPE sugar sensing transcriptional regulator|Pyrococcus furiosus (strain

Query: 1 KPLTLNH 7
KPLTL+H
Sbjct: 257 KPLTLSH 263


>sp|RFCL_AERPE|REPLICATION factor C large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 KPLTLNH 7
+PLTL H
Sbjct: 167 RPLTLTH 173


>sp|RNZ_AERPE|RIBONUCLEASE Z|Aeropyrum pernix (strain ATCC 700893

Query: 1 KPLTLNHTSE 10
KPLT+ TSE
Sbjct: 87 KPLTIISTSE 96


>sp|RL30_PYRNV|LARGE ribosomal subunit protein uL30|Pyrobaculum neutrophilum (strain

Query: 1 KPLTLNH 7
+PLTL H
Sbjct: 84 RPLTLEH 90


>sp|NADA_THEON|QUINOLINATE synthase|Thermococcus onnurineus (strain NA1)

Query: 1 KPLTLNHTSE 10
K +TLNH E
Sbjct: 263 KAITLNHIYE 272


>sp|NADA_THEKO|QUINOLINATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KPLTLNHTSE 10
K +TLNH E
Sbjct: 263 KAITLNHIYE 272


>sp|Y495_ARCFU|UNCHARACTERIZED protein AF_0495|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KPLTLN 6
KPLTLN
Sbjct: 43 KPLTLN 48




105|SequenceR|530|521|HAVYQKPLTL

>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HAVYQKPLTL 10
+AVY+ PLTL
Sbjct: 450 NAVYKVPLTL 459


>sp|Y034_PYRHO|UPF0284 protein PH0034|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 YQKPLTL 10
Y+KPLT+
Sbjct: 46 YEKPLTI 52


>sp|PRNK_THEKO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase TK1956|Thermococcus kodakarensis (strain ATCC

Query: 2 AVYQKPLTL 10
A Y KP TL
Sbjct: 22 ASYNKPFTL 30


>sp|NEP1_STAMF|RIBOSOMAL RNA small subunit methyltransferase|Staphylothermus marinus (strain

Query: 2 AVYQKPLT 9
++Y KPLT
Sbjct: 204 SIYNKPLT 211




106|SequenceR|535|526|KLTMIHAVYQ

>sp|ENDA_METBU|TRNA-SPLICING endonuclease|Methanococcoides burtonii (strain DSM 6242

Query: 1 KLTMIHAVY 9
+LT+I AVY
Sbjct: 35 ELTLIEAVY 43




107|SequenceR|540|531|STSVLKLTMI

***** No hits found ******


108|SequenceR|545|536|ERITVSTSVL

***** No hits found ******


109|SequenceR|550|541|PINKNERITV

>sp|Y770_METJA|UNCHARACTERIZED protein MJ0770|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 INKNERITV 10
+N NERITV
Sbjct: 89 LNWNERITV 97


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 1 PINKNERIT 9
P NKNE+I+
Sbjct: 525 PGNKNEKIS 533


>sp|Y767_METJA|UNCHARACTERIZED transcriptional regulator MJ0767|Methanocaldococcus jannaschii

Query: 1 PINKNERIT 9
P+NKNE ++
Sbjct: 48 PLNKNETVS 56


>sp|PYRC_METST|DIHYDROOROTASE stadtmanae (strain ATCC 43021

Query: 1 PINKNERIT 9
P+NKN+ IT
Sbjct: 189 PLNKNKTIT 197


>sp|MTNA_METAC|PUTATIVE methylthioribose-1-phosphate isomerase|Methanosarcina acetivorans

Query: 1 PINKNERIT 9
P+N+ RIT
Sbjct: 200 PLNQGSRIT 208


>sp|TFS_METJA|TRANSCRIPTION factor S|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NKNERITV 10
NK E+ITV
Sbjct: 46 NKKEKITV 53


>sp|HEM1_METBU|GLUTAMYL-TRNA reductase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PINKNERIT 9
PI KN+ IT
Sbjct: 413 PIKKNDGIT 421


>sp|Y1815_PYRHO|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus horikoshii (strain

Query: 2 INKNERITV 10
+NK E+IT+
Sbjct: 189 LNKEEKITI 197


>sp|Y373_PYRAB|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus abyssi (strain GE5 /

Query: 2 INKNERITV 10
+NK E+IT+
Sbjct: 189 LNKEEKITI 197




110|SequenceR|555|546|IKLIEPINKN

>sp|Y631_ARCFU|UNCHARACTERIZED protein AF_0631|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IKLIEPINK 9
IKL+EP+ K
Sbjct: 2 IKLVEPLKK 10


>sp|EF2_HALMA|ELONGATION factor 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 IKLIEPINK 9
IKL+EPI +
Sbjct: 619 IKLLEPIQQ 627


>sp|EF2_NATPD|ELONGATION factor 2|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IKLIEPINK 9
IKL+EPI +
Sbjct: 620 IKLLEPIQE 628


>sp|SYY_METJA|TYROSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IKLIEPINK 9
IK++EPI K
Sbjct: 296 IKILEPIRK 304


>sp|GLNA_METMP|GLUTAMINE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 4 IEPINKN 10
IEP+ KN
Sbjct: 368 IEPVEKN 374


>sp|CBID_METBU|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 IKLIEPINKN 10
+ +I+P+NK+
Sbjct: 1 MSIIDPVNKS 10


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 LIEPINKN 10
LI P NKN
Sbjct: 720 LISPYNKN 727




111|SequenceR|560|551|LGIIQIKLIE

>sp|CHEB1_METMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina mazei

Query: 1 LGIIQIKLIE 10
LG+ +IKLI+
Sbjct: 249 LGVTRIKLIK 258




112|SequenceR|565|556|SVQTGLGIIQ

>sp|Y1815_ARCFU|UNCHARACTERIZED aminotransferase AF_1815|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VQTGLG 7
VQTGLG
Sbjct: 232 VQTGLG 237


>sp|SYDND_HALVO|ASPARTATE--TRNA(ASP/ASN) ligase|Haloferax volcanii (Halobacterium volcanii)

Query: 2 VQTGLGI 8
V+TGLG+
Sbjct: 57 VETGLGV 63


>sp|PYRF_METAC|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina acetivorans (strain

Query: 4 TGLGIIQ 10
TGLGII+
Sbjct: 43 TGLGIIR 49


>sp|PYRF_METTE|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina thermophila

Query: 2 VQTGLGIIQ 10
+ TGLGII+
Sbjct: 35 LTTGLGIIR 43


>sp|PYRF_METBF|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina barkeri (strain Fusaro

Query: 4 TGLGIIQ 10
TGLGII+
Sbjct: 43 TGLGIIR 49




113|SequenceR|570|561|AGPRQSVQTG

>sp|AATB3_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PRQSVQTG 10
PR S+QTG
Sbjct: 128 PRDSIQTG 135


>sp|AATB1_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PRQSVQTG 10
PRQ +QTG
Sbjct: 122 PRQFIQTG 129


>sp|AATB_ARCFU|A-TYPE ATP synthase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PRQSVQTG 10
PR+ +QTG
Sbjct: 122 PREFIQTG 129




114|SequenceR|575|566|VKLAQAGPRQ

>sp|RTCA_PYRNV|RNA 3'-terminal phosphate cyclase|Pyrobaculum neutrophilum (strain DSM

Query: 2 KLAQAGPR 9
KL +AGPR
Sbjct: 329 KLERAGPR 336




115|SequenceR|580|571|ELKAEVKLAQ

***** No hits found ******


116|SequenceR|585|576|TIYWHELKAE

>sp|FENR_SULTO|FERREDOXIN--NADP reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TIY-WHELK 8
T+Y WHELK
Sbjct: 201 TVYTWHELK 209


>sp|FENR1_SULAC|FERREDOXIN--NADP reductase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TIY-WHELK 8
T+Y WHELK
Sbjct: 196 TVYTWHELK 204


>sp|FENR_SACS2|FERREDOXIN--NADP reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 WHELK 8
WHELK
Sbjct: 204 WHELK 208


>sp|SYS_HALMA|SERINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 WHELKAE 10
W ELKAE
Sbjct: 38 WRELKAE 44


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 TIYWHELKAE 10
T+YW+ +K E
Sbjct: 534 TLYWNSVKPE 543


>sp|FENR_METS5|FERREDOXIN--NADP reductase|Metallosphaera sedula (strain ATCC 51363

Query: 4 WHELK 8
WHELK
Sbjct: 205 WHELK 209


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 TIYWHELKAE 10
T+YW+ L+ E
Sbjct: 544 TLYWNTLQPE 553


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 1 TIYWHELKAE 10
T +WH++ E
Sbjct: 492 TYFWHDISKE 501


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 3 YWHELKAE 10
YWH++ E
Sbjct: 465 YWHDISFE 472


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 YWHELKAE 10
YWH++ E
Sbjct: 460 YWHDISFE 467


>sp|SYFB_ARCFU|PHENYLALANINE--TRNA ligase beta subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TIYWHELK 8
T+YW EL+
Sbjct: 5 TLYWDELE 12


>sp|AATA_METAR|A-TYPE ATP synthase subunit A|Methanocella arvoryzae (strain DSM 22066

Query: 4 WHELKAE 10
W++LKAE
Sbjct: 448 WNQLKAE 454


>sp|FENR2_SULAC|FERREDOXIN--NADP reductase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 WHELK 8
WHELK
Sbjct: 205 WHELK 209


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 1 TIYWHELKAE 10
T +WH++ E
Sbjct: 492 TYHWHDISKE 501


>sp|GSA_HALLT|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 IYWHELKAE 10
++W E+K +
Sbjct: 403 VFWQEMKEQ 411


>sp|DHYS_SACS2|PROBABLE deoxyhypusine synthase|Saccharolobus solfataricus (strain ATCC

Query: 1 TIYWHELK 8
TI+W++ K
Sbjct: 246 TIWWNQFK 253


>sp|DHYS_SACI6|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 TIYWHELK 8
TI+W++ K
Sbjct: 246 TIWWNQFK 253


>sp|DHYS_SACI7|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 TIYWHELK 8
TI+W++ K
Sbjct: 246 TIWWNQFK 253


>sp|DHYS_SACI4|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 TIYWHELK 8
TI+W++ K
Sbjct: 246 TIWWNQFK 253


>sp|DHYS_SACI3|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.16.27)

Query: 1 TIYWHELK 8
TI+W++ K
Sbjct: 246 TIWWNQFK 253


>sp|DHYS_SACI2|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 TIYWHELK 8
TI+W++ K
Sbjct: 246 TIWWNQFK 253


>sp|DHYS_SACI1|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 TIYWHELK 8
TI+W++ K
Sbjct: 246 TIWWNQFK 253


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 1 TIYWHELKAE 10
T +WH++ E
Sbjct: 497 TYHWHDVSKE 506


>sp|QOXM_SULAC|QUINOL oxidase subunit 1/3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TIYWHELKA 9
T YWH + A
Sbjct: 765 TYYWHFVDA 773


>sp|RNP1_THEON|RIBONUCLEASE P protein component 1|Thermococcus onnurineus (strain NA1)

Query: 2 IYWHEL 7
I WHEL
Sbjct: 43 ILWHEL 48


>sp|DHYS_SULAC|PROBABLE deoxyhypusine synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TIYWHELK 8
TI+W++ K
Sbjct: 245 TIWWNQFK 252


>sp|RNP1_THEKO|RIBONUCLEASE P protein component 1|Thermococcus kodakarensis (strain ATCC

Query: 2 IYWHEL 7
I WHEL
Sbjct: 43 IIWHEL 48


>sp|Y1713_ARCFU|UNCHARACTERIZED protein AF_1713|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IYWHELKAE 10
I W +LKAE
Sbjct: 48 IPWEKLKAE 56


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 TIYWHELKAE 10
T +WH++ +
Sbjct: 492 TYFWHDISKD 501


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TIYWHE 6
T+YW E
Sbjct: 159 TVYWKE 164


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 TIYWHELKAE 10
T +WH++ +
Sbjct: 492 TYFWHDISKD 501


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 TIYWHELKAE 10
T +WH++ +
Sbjct: 492 TYFWHDISKD 501




117|SequenceR|590|581|QQRLGTIYWH

>sp|GLKA_PYRAB|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 QQRLGTIYW 9
QQ LG+I W
Sbjct: 70 QQLLGSILW 78


>sp|ACDE2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Archaeoglobus

Query: 4 LGTIYWH 10
LG+IY+H
Sbjct: 116 LGSIYYH 122


>sp|MFNA_METB6|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoregula boonei (strain

Query: 2 QRLGTIYWH 10
+RLGT++ H
Sbjct: 70 ERLGTLFHH 78


>sp|IDI2_METMA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 QRLGTIYW 9
+RLG ++W
Sbjct: 241 ERLGELFW 248


>sp|IDI2_METAC|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 QRLGTIYW 9
+RLG ++W
Sbjct: 241 ERLGELFW 248


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 QRLGTIYW 9
Q+ GT +W
Sbjct: 22 QKCGTFFW 29


>sp|PSTB_METKA|PHOSPHATE import ATP-binding protein PstB|Methanopyrus kandleri (strain

Query: 1 QQRLGTIYWH 10
++R+GT++ H
Sbjct: 85 RRRVGTVFQH 94


>sp|THIOL_METJA|ACETYL-COA acetyltransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QRLGTIYWH 10
+++G IYW
Sbjct: 344 RQVGEIYWQ 352




118|SequenceR|595|586|SPVIDQQRLG

>sp|LRP_HALS3|HTH-TYPE transcriptional regulator Lrp|Halobacterium salinarum (strain

Query: 1 SPVIDQQRLG 10
+PV+D +RLG
Sbjct: 53 TPVVDYERLG 62


>sp|AROC_PYRIL|CHORISMATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PVIDQQRL 9
PV+DQQ L
Sbjct: 181 PVVDQQAL 188


>sp|AROC_PYRNV|CHORISMATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PVIDQQRL 9
PV+DQQ L
Sbjct: 181 PVVDQQAL 188




119|SequenceR|600|591|ISAVLSPVID

>sp|QUEC2_SULTO|7-CYANO-7-DEAZAGUANINE synthase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SAVLSPVID 10
SAV+ P++D
Sbjct: 132 SAVVPPILD 140


>sp|Y091_METJA|UNCHARACTERIZED membrane protein MJ0091|Methanocaldococcus jannaschii (strain

Query: 1 ISAVLSPVI 9
+SA++SP+I
Sbjct: 88 LSAIISPII 96




120|SequenceR|605|596|STTDGISAVL

>sp|PYRH_METMJ|URIDYLATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 STTDGISAVL 10
TTD +SAVL
Sbjct: 118 QTTDAVSAVL 127


>sp|PYRH_THEGJ|URIDYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 TTDGISAVL 10
TTD +SA+L
Sbjct: 119 TTDAVSALL 127


>sp|PYRH_METB6|URIDYLATE kinase|Methanoregula boonei (strain DSM 21154

Query: 1 STTDGISAVL 10
TTD ++AVL
Sbjct: 118 QTTDAVAAVL 127


>sp|PYRH_METLZ|URIDYLATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 STTDGISAVL 10
TTD ++AVL
Sbjct: 119 QTTDAVAAVL 128


>sp|PYRH_METHJ|URIDYLATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 STTDGISAVL 10
TTD ++AVL
Sbjct: 118 QTTDAVAAVL 127


>sp|PYRH_PYRAB|URIDYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 TTDGISAVL 10
TTD +SA+L
Sbjct: 119 TTDAVSALL 127


>sp|PYRH_METAR|URIDYLATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 STTDGISAVL 10
TTD ++A+L
Sbjct: 117 QTTDAVAAIL 126


>sp|PYRH_METBF|URIDYLATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 STTDGISAVL 10
TTD ++A+L
Sbjct: 117 QTTDAVAAIL 126


>sp|PYRH_PYRHO|URIDYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TTDGISAVL 10
TTD +SA+L
Sbjct: 119 TTDAVSALL 127




121|SequenceR|610|601|IKLLSSTTDG

>sp|THYX_SACS2|FLAVIN-DEPENDENT thymidylate synthase|Saccharolobus solfataricus (strain ATCC

Query: 1 IKLLSSTTDG 10
+KL+S T DG
Sbjct: 4 VKLVSYTNDG 13


>sp|THYX_SULTO|FLAVIN-DEPENDENT thymidylate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IKLLSSTTDG 10
+KL+S T DG
Sbjct: 3 VKLVSYTRDG 12


>sp|HMPTM_METJA|7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN dimethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IKLLSSTTDG 10
IKL+ TDG
Sbjct: 292 IKLVEEQTDG 301




122|SequenceR|615|606|NTEFKIKLLS

>sp|NPPNK_METMP|BIFUNCTIONAL NADP phosphatase/NAD kinase|Methanococcus maripaludis (strain DSM

Query: 1 NTEFKIKLL 9
N+E KIKLL
Sbjct: 509 NSEIKIKLL 517


>sp|RS12_STAMF|SMALL ribosomal subunit protein uS12|Staphylothermus marinus (strain

Query: 3 EFKIKLL 9
EFKIK+L
Sbjct: 29 EFKIKML 35


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 1 NTEFKIKL 8
N EF+IKL
Sbjct: 676 NFEFRIKL 683


>sp|RADA_METBU|DNA repair and recombination protein|Methanococcoides burtonii (strain

Query: 1 NTEFKIKLL 9
NTE +KLL
Sbjct: 202 NTEMPVKLL 210


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NTEFKIKLLS 10
N E K++LLS
Sbjct: 818 NNEIKVELLS 827




123|SequenceR|620|611|PSDEPNTEFK

>sp|DFX_ARCFU|DESULFOFERRODOXIN homolog|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PSDEPNTEF 9
P DEP EF
Sbjct: 95 PGDEPKAEF 103


>sp|TOP3_SACS2|DNA topoisomerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PSDEPNTEFK 10
P + PN++FK
Sbjct: 381 PKNLPNSKFK 390


>sp|FUMC_METAC|FUMARATE hydratase class II|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PSDEPNT 7
PSDEP +
Sbjct: 324 PSDEPGS 330


>sp|TRPA_METVS|TRYPTOPHAN synthase alpha chain|Methanococcus vannielii (strain ATCC 35089

Query: 2 SDEPNTEF 9
SDE +TEF
Sbjct: 151 SDEASTEF 158


>sp|TRPA_METMP|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain DSM 14266

Query: 2 SDEPNTEF 9
SDE +TEF
Sbjct: 151 SDEASTEF 158


>sp|TRPA_METM7|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C7 /

Query: 2 SDEPNTEF 9
SDE +TEF
Sbjct: 151 SDEASTEF 158


>sp|TRPA_METM6|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C6 /

Query: 2 SDEPNTEF 9
SDE +TEF
Sbjct: 151 SDEASTEF 158


>sp|TRPA_METM5|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C5 /

Query: 2 SDEPNTEF 9
SDE +TEF
Sbjct: 151 SDEASTEF 158


>sp|DHQS_METBU|3-DEHYDROQUINATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 SDEPNT 7
SD+PNT
Sbjct: 180 SDDPNT 185


>sp|DFX_METTH|DESULFOFERRODOXIN homolog|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PSDEPNTEF 9
P D P EF
Sbjct: 95 PGDNPEAEF 103




124|SequenceR|625|616|LTQDAPSDEP

>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LTQDAPSDEP 10
L DAP+D+P
Sbjct: 272 LNNDAPADQP 281


>sp|RS2_IGNH4|SMALL ribosomal subunit protein uS2|Ignicoccus hospitalis (strain KIN4/I

Query: 1 LTQDAPSDEP 10
L+ DAP D+P
Sbjct: 190 LSPDAPEDQP 199


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 2 TQDAPSDE 9
T DAP+DE
Sbjct: 965 TLDAPTDE 972


>sp|PGP_METTH|PHOSPHOGLYCOLATE phosphatase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LTQDAPSD 8
LT+D P+D
Sbjct: 112 LTRDVPAD 119


>sp|PPSA_ARCFU|PROBABLE phosphoenolpyruvate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 2 TQDAPSDE 9
T DAP+DE
Sbjct: 536 TIDAPTDE 543


>sp|PPSA_METTH|PROBABLE phosphoenolpyruvate synthase|Methanothermobacter thermautotrophicus

Query: 2 TQDAPSDE 9
T DAP+DE
Sbjct: 565 TLDAPTDE 572


>sp|IF2P_HALSA|PROBABLE translation initiation factor IF-2|Halobacterium salinarum (strain

Query: 1 LTQDAPSDE 9
LT D P+DE
Sbjct: 572 LTSDLPADE 580


>sp|IF2P_HALS3|PROBABLE translation initiation factor IF-2|Halobacterium salinarum (strain

Query: 1 LTQDAPSDE 9
LT D P+DE
Sbjct: 572 LTSDLPADE 580


>sp|PIMT_HYPBU|PROTEIN-L-ISOASPARTATE O-methyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 5 APSDEP 10
APSDEP
Sbjct: 108 APSDEP 113


>sp|UVRB_HALSA|UVRABC system protein B|Halobacterium salinarum (strain ATCC 700922

Query: 4 DAPSDE 9
DAPSDE
Sbjct: 623 DAPSDE 628




125|SequenceR|630|621|QSQVILTQDA

>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QSQVILTQD 9
++Q++L+QD
Sbjct: 334 EAQIVLSQD 342




126|SequenceR|635|626|IVEVPQSQVI

>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 1 IVEVPQSQV 9
IVEVPQ ++
Sbjct: 423 IVEVPQEEL 431




127|SequenceR|640|631|TKADYIVEVP

>sp|AMPD_METJA|ANHYDROMEVALONATE phosphate decarboxylase|Methanocaldococcus jannaschii (strain

Query: 2 KADYIVEVP 10
K YIVE+P
Sbjct: 88 KEKYIVEIP 96


>sp|RL10E_METST|LARGE ribosomal subunit protein uL16|Methanosphaera stadtmanae (strain

Query: 1 TKADYIVEVP 10
T+ DYI ++P
Sbjct: 6 TRKDYIRKIP 15


>sp|RPO1C_METMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina mazei (strain ATCC

Query: 2 KADYIVEVP 10
KA+ +VEVP
Sbjct: 386 KAEKVVEVP 394


>sp|GLCD1_CALMQ|GLUCOSE 1-dehydrogenase 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 TKADYIVEVP 10
T A Y+V+VP
Sbjct: 126 TDAKYLVKVP 135


>sp|GLCD2_VULM7|GLUCOSE 1-dehydrogenase 2|Vulcanisaeta moutnovskia (strain 768-28)

Query: 1 TKADYIVEVP 10
T A Y+V+VP
Sbjct: 126 TDAKYLVKVP 135


>sp|Y539_THEKO|PUTATIVE HTH-type transcriptional regulatory protein|Thermococcus

Query: 1 TKADYIVEVP 10
TKA+ + EVP
Sbjct: 276 TKAEVVSEVP 285


>sp|RL21_PYRAB|LARGE ribosomal subunit protein eL21|Pyrococcus abyssi (strain GE5 /

Query: 5 YIVEVP 10
YIVEVP
Sbjct: 73 YIVEVP 78


>sp|DPHB_METTH|DIPHTHINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 KADYIVEV 9
+ADY+VE+
Sbjct: 244 EADYLVEI 251


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 KADYIVE 8
KAD+IVE
Sbjct: 558 KADFIVE 564


>sp|Y1987_ARCFU|UNCHARACTERIZED protein AF_1987|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KADYIVEVP 10
K D ++E+P
Sbjct: 118 KGDSVIEIP 126


>sp|RL10E_HYPBU|LARGE ribosomal subunit protein uL16|Hyperthermus butylicus (strain DSM

Query: 4 DYIVEV 9
DYIVEV
Sbjct: 49 DYIVEV 54


>sp|RL21_PYRHO|LARGE ribosomal subunit protein eL21|Pyrococcus horikoshii (strain ATCC

Query: 5 YIVEVP 10
YIVEVP
Sbjct: 73 YIVEVP 78


>sp|FKBPS_METJA|SHORT-TYPE peptidyl-prolyl cis-trans isomerase|Methanocaldococcus jannaschii

Query: 2 KADYIVEV 9
K DYI+EV
Sbjct: 12 KVDYILEV 19


>sp|GLCDH_THETK|GLUCOSE 1-dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 1 TKADYIVEVP 10
T A Y+V+VP
Sbjct: 126 TDAAYLVKVP 135


>sp|LEU1_METTH|PROBABLE 2-isopropylmalate synthase|Methanothermobacter thermautotrophicus

Query: 1 TKADYIVEV 9
T+ DY+VEV
Sbjct: 153 TEFDYLVEV 161


>sp|DP2S_THEAC|DNA polymerase II small subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 ADYIVEVP 10
A+Y+V+VP
Sbjct: 304 AEYLVDVP 311


>sp|BAX1_SULTO|ENDONUCLEASE Bax1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 ADYIVEV 9
DYIVEV
Sbjct: 450 GDYIVEV 456


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 5 YIVEVP 10
YIVE+P
Sbjct: 970 YIVEIP 975




128|SequenceR|645|636|VVANVTKADY

>sp|GLYA_STAMF|SERINE hydroxymethyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 1 VVANVTKADY 10
++A VTK DY
Sbjct: 241 LIATVTKDDY 250


>sp|Y83A_METJA|PROBABLE pilin MJ0832.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VVANVTKAD 9
++AN+TK D
Sbjct: 124 IIANITKID 132




129|SequenceR|650|641|SQFFEVVANV

>sp|FMDC_METBF|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanosarcina barkeri

Query: 1 SQFFEVVAN 9
S+FFEV N
Sbjct: 81 SEFFEVTGN 89


>sp|RS4E_PYRCJ|SMALL ribosomal subunit protein eS4|Pyrobaculum calidifontis (strain DSM

Query: 2 QFFEVV 7
QFFEVV
Sbjct: 193 QFFEVV 198


>sp|ACD1_ARCFU|ACETATE--COA ligase [ADP-forming] I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FFEVVANV 10
FFE+++NV
Sbjct: 541 FFEILSNV 548


>sp|NUSA_METJA|PROBABLE transcription termination protein NusA|Methanocaldococcus

Query: 3 FFEVVANV 10
FFE +ANV
Sbjct: 16 FFEKIANV 23


>sp|FLPA_THESM|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus sibiricus (strain DSM

Query: 1 SQFFEVVANV 10
S++FEVV +
Sbjct: 200 SEYFEVVERI 209




130|SequenceR|655|646|DLGKNSQFFE

>sp|THII_ARCFU|PROBABLE tRNA sulfurtransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GKNSQFFE 10
GKN +FFE
Sbjct: 17 GKNREFFE 24


>sp|Y115_METJA|UNCHARACTERIZED protein MJ0115|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KNSQFFE 10
+NSQFF+
Sbjct: 109 RNSQFFK 115


>sp|T2M7_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 LGKNSQFFE 10
LGKN FFE
Sbjct: 56 LGKNVLFFE 64


>sp|RS4_NATPD|SMALL ribosomal subunit protein uS4|Natronomonas pharaonis (strain ATCC

Query: 2 LGKNSQFFE 10
LG N++F+E
Sbjct: 3 LGSNTKFYE 11


>sp|ARGB_METMA|ACETYLGLUTAMATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LGKNSQFFE 10
+GK ++FF+
Sbjct: 73 MGKKAEFFQ 81


>sp|ARGB_METBF|ACETYLGLUTAMATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LGKNSQFFE 10
+GK ++FF+
Sbjct: 96 MGKKAEFFQ 104


>sp|ARGB_METAC|ACETYLGLUTAMATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LGKNSQFFE 10
+GK ++FF+
Sbjct: 73 MGKKAEFFQ 81


>sp|RS4_HALMA|SMALL ribosomal subunit protein uS4|Haloarcula marismortui (strain ATCC

Query: 2 LGKNSQFFE 10
LG N++F+E
Sbjct: 3 LGSNTKFYE 11


>sp|IF2P_METMJ|PROBABLE translation initiation factor IF-2|Methanoculleus marisnigri

Query: 1 DLGKNSQFFE 10
DLG NS+ F+
Sbjct: 175 DLGFNSERFD 184


>sp|CAPPA_PICTO|PHOSPHOENOLPYRUVATE carboxylase|Picrophilus torridus (strain ATCC 700027

Query: 2 LGKNSQFFE 10
+ KN +FFE
Sbjct: 68 ISKNHEFFE 76




131|SequenceR|660|651|TIQELDLGKN

>sp|CPGS_METKA|CYCLIC 2,3-diphosphoglycerate synthetase|Methanopyrus kandleri (strain

Query: 1 TIQELDLGK 9
T++ELDLG+
Sbjct: 26 TVEELDLGE 34


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 2 IQELDLGKN 10
I ++DLGKN
Sbjct: 125 IDKVDLGKN 133


>sp|Y433_ARCFU|PROBABLE S-adenosyl-L-methionine-binding protein AF_0433|Archaeoglobus

Query: 5 LDLGKN 10
LDLGKN
Sbjct: 227 LDLGKN 232


>sp|RL30E_METTH|LARGE ribosomal subunit protein eL30|Methanothermobacter

Query: 1 TIQELDLGKN 10
TIQ L LGK
Sbjct: 23 TIQSLKLGKG 32


>sp|RL2_SULAC|LARGE ribosomal subunit protein uL2|Sulfolobus acidocaldarius (strain

Query: 3 QELDLGKN 10
QE+ +GKN
Sbjct: 77 QEISIGKN 84


>sp|TRPE_THEKO|ANTHRANILATE synthase component 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IQELDLGKN 10
+ ELD GKN
Sbjct: 323 VGELDEGKN 331


>sp|APT_METVS|ADENINE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 3 QELDLG 8
QELDLG
Sbjct: 68 QELDLG 73




132|SequenceR|665|656|MLTASTIQEL

>sp|DNAK_METAR|CHAPERONE protein DnaK|Methanocella arvoryzae (strain DSM 22066

Query: 1 MLTASTIQEL 10
MLT +T++EL
Sbjct: 270 MLTRATLEEL 279




133|SequenceR|670|661|IEELKMLTAS

>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 1 IEELKMLTAS 10
IE++K +TAS
Sbjct: 48 IEDVKKITAS 57


>sp|RFCL_METTP|REPLICATION factor C large subunit|Methanothrix thermoacetophila (strain DSM

Query: 1 IEELKMLTAS 10
IEE+ +LT S
Sbjct: 392 IEEIALLTGS 401




134|SequenceR|675|666|ATREKIEELK

>sp|PGK_PYRAB|PHOSPHOGLYCERATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 TREKIEELK 10
REKI+ELK
Sbjct: 95 AREKIQELK 103


>sp|Y1426_METTH|UPF0284 protein MTH_1426|Methanothermobacter thermautotrophicus (strain

Query: 3 REKIEEL 9
RE+IEEL
Sbjct: 347 RERIEEL 353


>sp|SPSS2_METB6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanoregula boonei (strain DSM 21154

Query: 1 ATREKIEELK 10
AT +KIEE+K
Sbjct: 200 ATAQKIEEVK 209


>sp|TRPC_SULAC|INDOLE-3-GLYCEROL phosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ATREKIEELK 10
+TR+ IEEL+
Sbjct: 215 STRQDIEELR 224


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii (strain

Query: 1 ATREKIEELK 10
A REKI+E+K
Sbjct: 291 ALREKIKEIK 300


>sp|PGK_PYRHO|PHOSPHOGLYCERATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TREKIEELK 10
REKI+ELK
Sbjct: 95 AREKIKELK 103


>sp|DSRD_ARCFU|PROTEIN DsrD|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ATREKIEEL 9
AT+E IEEL
Sbjct: 62 ATKEYIEEL 70


>sp|TYW32_PYRFU|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 3 REKIEELK 10
REK EELK
Sbjct: 180 REKFEELK 187


>sp|PCP_PYRHO|PYRROLIDONE-CARBOXYLATE peptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TREKIEELK 10
TRE +EE+K
Sbjct: 114 TREIVEEMK 122


>sp|PELO_THEON|PROTEIN pelota homolog|Thermococcus onnurineus (strain NA1)

Query: 3 REKIEEL 9
REKIEEL
Sbjct: 312 REKIEEL 318


>sp|AGLUS_ARCFU|ARCHAEAL glutamate synthase [NADPH]|Archaeoglobus fulgidus (strain ATCC

Query: 2 TREKIEELK 10
TRE++++LK
Sbjct: 86 TRERLQDLK 94


>sp|PELO_PYRFU|PROTEIN pelota homolog|Pyrococcus furiosus (strain ATCC 43587

Query: 3 REKIEEL 9
REKIEEL
Sbjct: 311 REKIEEL 317


>sp|PCP_PYRAB|PYRROLIDONE-CARBOXYLATE peptidase|Pyrococcus abyssi (strain GE5 /

Query: 1 ATREKIEELK 10
TRE +EE+K
Sbjct: 116 PTREIVEEMK 125


>sp|SYC_PYRIL|CYSTEINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 TREKIEEL 9
+R+KIEEL
Sbjct: 160 SRQKIEEL 167


>sp|PUR1_METTH|AMIDOPHOSPHORIBOSYLTRANSFERASE thermautotrophicus (strain ATCC 29096

Query: 4 EKIEELK 10
EK+EELK
Sbjct: 70 EKLEELK 76


>sp|PUR7_METTH|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 ATREKIEELK 10
ATR+++EE++
Sbjct: 145 ATRDELEEIR 154


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 ATREKIEELK 10
A EKIEEL+
Sbjct: 551 AAVEKIEELR 560


>sp|Y915_ARCFU|UNCHARACTERIZED protein AF_0915|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ATREKIEELK 10
A REKI EL+
Sbjct: 116 ACREKIFELR 125


>sp|THIL_PYRAB|THIAMINE-MONOPHOSPHATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 REKIEEL 9
REK+EEL
Sbjct: 261 REKVEEL 267


>sp|PELO_PYRHO|PROTEIN pelota homolog|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TREKIEEL 9
REK+EEL
Sbjct: 310 NREKVEEL 317


>sp|PUR7_METS3|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 ATREKIEEL 9
AT+E+I+EL
Sbjct: 143 ATQEEIDEL 151


>sp|PELO_THEKO|PROTEIN pelota homolog|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 REKIEEL 9
REK+EEL
Sbjct: 312 REKVEEL 318




135|SequenceR|680|671|HTLGTATREK

>sp|SYR_HALLT|ARGININE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 HTLGTATRE 9
HT+ T TRE
Sbjct: 542 HTIATFTRE 550


>sp|PSB1_THEPD|PROTEASOME subunit beta 1|Thermofilum pendens (strain DSM 2475

Query: 3 LGTATREK 10
LGT TREK
Sbjct: 128 LGTVTREK 135


>sp|GUAAB_SACI7|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 2 TLGTATREK 10
T+G TREK
Sbjct: 202 TIGKLTREK 210


>sp|GUAAB_SACI6|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 2 TLGTATREK 10
T+G TREK
Sbjct: 202 TIGKLTREK 210


>sp|GUAAB_SACI4|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 2 TLGTATREK 10
T+G TREK
Sbjct: 202 TIGKLTREK 210


>sp|GUAAB_SACI3|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 2 TLGTATREK 10
T+G TREK
Sbjct: 202 TIGKLTREK 210


>sp|GUAAB_SACI1|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 2 TLGTATREK 10
T+G TREK
Sbjct: 202 TIGKLTREK 210


>sp|GUAAB_SACI2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 2 TLGTATREK 10
T+G TREK
Sbjct: 202 TIGKLTREK 210


>sp|PSB2_PYRIL|PROTEASOME subunit beta 2|Pyrobaculum islandicum (strain DSM 4184

Query: 3 LGTATREK 10
LGT TRE+
Sbjct: 119 LGTVTRER 126


>sp|PSB1_PYRAE|PROTEASOME subunit beta 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 LGTATREK 10
LGT T+EK
Sbjct: 119 LGTVTKEK 126


>sp|PELO_HALSA|PROTEIN pelota homolog|Halobacterium salinarum (strain ATCC 700922

Query: 1 HTLGTATREK 10
HTL A RE+
Sbjct: 101 HTLNVAEREE 110


>sp|PELO_HALS3|PROTEIN pelota homolog|Halobacterium salinarum (strain ATCC 29341

Query: 1 HTLGTATREK 10
HTL A RE+
Sbjct: 101 HTLNVAEREE 110


>sp|PSB1_PYRAR|PROTEASOME subunit beta 1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 LGTATREK 10
LGT T+EK
Sbjct: 119 LGTVTKEK 126


>sp|PSB1_PYRCJ|PROTEASOME subunit beta 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 LGTATREK 10
LGT T+EK
Sbjct: 119 LGTVTKEK 126




136|SequenceR|685|676|RTEIIHTLGT

>sp|AMZA_HALSA|ARCHAEMETZINCIN salinarum (strain ATCC 700922

Query: 1 RTEIIHTLG 9
R E++H LG
Sbjct: 125 RKEVVHELG 133


>sp|AMZA_HALS3|ARCHAEMETZINCIN salinarum (strain ATCC 29341

Query: 1 RTEIIHTLG 9
R E++H LG
Sbjct: 125 RKEVVHELG 133


>sp|DAPAT_METJA|LL-DIAMINOPIMELATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EIIHTLGT 10
E+IH++G+
Sbjct: 108 EVIHSIGS 115


>sp|CETZ3_HALVD|TUBULIN-LIKE protein CetZ3|Haloferax volcanii (strain ATCC 29605

Query: 2 TEIIHTLGT 10
+EII+TLG+
Sbjct: 217 SEIINTLGS 225




137|SequenceR|690|681|LDLVKRTEII

>sp|Y089_SULAC|MEMO1 family protein Saci_0089|Sulfolobus acidocaldarius (strain ATCC

Query: 1 LDLVKRTEII 10
L+LVK TEII
Sbjct: 119 LELVKLTEII 128


>sp|Y2062_SULTO|MEMO1 family protein STK_20620|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LDLVKRTEII 10
+DLV+ +E+I
Sbjct: 118 MDLVRESEVI 127


>sp|UVRB_METMP|UVRABC system protein B|Methanococcus maripaludis (strain DSM 14266

Query: 1 LDLVKRTEII 10
+D ++RTEII
Sbjct: 477 IDTIERTEII 486


>sp|AROK_METBU|SHIKIMATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 2 DLVKRTE 8
+LVKRTE
Sbjct: 158 ELVKRTE 164


>sp|DPO4_NITMS|DNA polymerase IV|Nitrosopumilus maritimus (strain SCM1)

Query: 1 LDLVKRTE 8
LD+ KRTE
Sbjct: 115 LDVTKRTE 122




138|SequenceR|695|686|KLNIRLDLVK

>sp|SYH_AERPE|HISTIDINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LNIRLDLVK 10
LN+R+DL +
Sbjct: 368 LNVRIDLSR 376


>sp|RL3_SACS2|LARGE ribosomal subunit protein uL3|Saccharolobus solfataricus (strain

Query: 1 KLNIRLDLVK 10
+ N +LDL+K
Sbjct: 139 RFNTKLDLIK 148


>sp|AROD_METHJ|3-DEHYDROQUINATE dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LNIRLDLV 9
L IRLDL+
Sbjct: 37 LEIRLDLI 44


>sp|SYC_STAMF|CYSTEINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 KLNIRLDL 8
KLN+++DL
Sbjct: 104 KLNVKVDL 111


>sp|SYR_SACS2|ARGININE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KLNIRLD 7
KLNIR D
Sbjct: 291 KLNIRFD 297


>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain Fusaro

Query: 1 KLNIRLDLVK 10
K+N RLD V+
Sbjct: 335 KINYRLDAVE 344




139|SequenceR|700|691|VLYSPKLNIR

>sp|NADM_SULTO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LYSPKLNI 9
LYSPK ++
Sbjct: 90 LYSPKFDV 97


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 YSPKLN 8
Y+PKLN
Sbjct: 269 YNPKLN 274


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 3 YSPKLNI 9
YSP++N+
Sbjct: 531 YSPEINV 537


>sp|MAP2_METJA|METHIONINE aminopeptidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YSPKLN 8
Y+PKLN
Sbjct: 66 YTPKLN 71




140|SequenceR|705|696|GTQPVVLYSP

>sp|SYK_THEKO|LYSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 QPVVLYSP 10
QPV++Y P
Sbjct: 171 QPVMIYCP 178


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 TQPVVLYSP 10
T PV+LY+P
Sbjct: 226 TVPVILYAP 234


>sp|RF1_HALWD|PEPTIDE chain release factor subunit|Haloquadratum walsbyi (strain DSM

Query: 1 GTQPVVLYSP 10
GTQ V +Y P
Sbjct: 31 GTQLVTIYIP 40


>sp|RF1_HALVD|PEPTIDE chain release factor subunit|Haloferax volcanii (strain ATCC

Query: 1 GTQPVVLYSP 10
GTQ V +Y P
Sbjct: 31 GTQLVTIYIP 40


>sp|RF1_HALSA|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 1 GTQPVVLYSP 10
GTQ V +Y P
Sbjct: 31 GTQLVTIYIP 40


>sp|RF1_HALS3|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 1 GTQPVVLYSP 10
GTQ V +Y P
Sbjct: 31 GTQLVTIYIP 40


>sp|RF1_HALLT|PEPTIDE chain release factor subunit|Halorubrum lacusprofundi (strain

Query: 1 GTQPVVLYSP 10
GTQ V +Y P
Sbjct: 31 GTQLVTIYIP 40


>sp|HEM11_PYRCJ|GLUTAMYL-TRNA reductase 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 QPVVLYSP 10
+PVV+Y P
Sbjct: 235 EPVVVYVP 242


>sp|RL15_PYRNV|LARGE ribosomal subunit protein uL15|Pyrobaculum neutrophilum (strain DSM

Query: 4 PVVLYSP 10
P+V+Y+P
Sbjct: 125 PIVVYTP 131


>sp|RFCL_METAC|REPLICATION factor C large subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 TQPVVLYSP 10
T+ V+LY P
Sbjct: 48 TRAVILYGP 56


>sp|RL15_PYRAE|LARGE ribosomal subunit protein uL15|Pyrobaculum aerophilum (strain ATCC

Query: 4 PVVLYSP 10
PV++Y+P
Sbjct: 125 PVIVYTP 131


>sp|DPCKG_PYRHO|GTP-DEPENDENT dephospho-CoA kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GTQPVVLYSP 10
T P VLY+P
Sbjct: 129 ATIPAVLYAP 138


>sp|COBS_PYRAB|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrococcus abyssi (strain GE5 /

Query: 4 PVVLYSP 10
PVV+Y P
Sbjct: 172 PVVIYDP 178


>sp|RNZ_META3|RIBONUCLEASE Z|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 TQPVVLYSP 10
T+P+ +Y P
Sbjct: 82 TEPINIYGP 90


>sp|ACDG_METTH|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanothermobacter

Query: 4 PVVLYSP 10
P+VL+SP
Sbjct: 202 PLVLFSP 208


>sp|RL15_PYRAR|LARGE ribosomal subunit protein uL15|Pyrobaculum arsenaticum (strain DSM

Query: 4 PVVLYSP 10
PV++Y+P
Sbjct: 125 PVIVYTP 131


>sp|RL15_PYRIL|LARGE ribosomal subunit protein uL15|Pyrobaculum islandicum (strain DSM

Query: 4 PVVLYSP 10
PV++Y+P
Sbjct: 125 PVIVYTP 131


>sp|APGM_IGNH4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 PVVLYSP 10
PV+LY+P
Sbjct: 367 PVLLYAP 373


>sp|RTCA_PYRAE|RNA 3'-terminal phosphate cyclase|Pyrobaculum aerophilum (strain ATCC

Query: 4 PVVLYSP 10
P++LY+P
Sbjct: 105 PILLYAP 111


>sp|CSG_HALSA|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 700922

Query: 1 GTQPVVLYS 9
GT VVLY+
Sbjct: 444 GTDDVVLYA 452


>sp|CSG_HALS3|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 29341

Query: 1 GTQPVVLYS 9
GT VVLY+
Sbjct: 444 GTDDVVLYA 452


>sp|APGM_PYRAR|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 PVVLYSP 10
PV+LY P
Sbjct: 361 PVMLYGP 367


>sp|RTCA_PYRIL|RNA 3'-terminal phosphate cyclase|Pyrobaculum islandicum (strain DSM

Query: 4 PVVLYSP 10
P++LY+P
Sbjct: 105 PILLYAP 111


>sp|DPCKG_PYRAB|GTP-DEPENDENT dephospho-CoA kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 GTQPVVLYSP 10
T P VLY+P
Sbjct: 129 ATIPAVLYAP 138




141|SequenceR|710|701|KEHHFGTQPV

>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 KEHHFGTQPV 10
+E HF +QP+
Sbjct: 9094 REDHFSSQPL 9103


>sp|Y1659_METJA|UNCHARACTERIZED ATP-binding protein MJ1659|Methanocaldococcus jannaschii (strain

Query: 3 HHFGTQPV 10
H+FG +P+
Sbjct: 246 HYFGGKPI 253


>sp|CAPPA_METHJ|PHOSPHOENOLPYRUVATE carboxylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KEHHFG 6
KEHH G
Sbjct: 73 KEHHLG 78


>sp|SYW_PYRAB|TRYPTOPHAN--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 HHFGTQPV 10
HFGT P+
Sbjct: 23 EHFGTSPL 30


>sp|SYW_PYRHO|TRYPTOPHAN--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 HFGTQPV 10
HFGT P+
Sbjct: 24 HFGTSPL 30


>sp|BE_THEKO|1,4-ALPHA-GLUCAN branching enzyme TK1436|Thermococcus kodakarensis (strain ATCC

Query: 2 EHHFGTQP 9
E HFG +P
Sbjct: 169 EKHFGMKP 176


>sp|FLPA_PYRIL|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum islandicum (strain

Query: 2 EHHFGTQPV 10
EHHFG V
Sbjct: 12 EHHFGVYVV 20


>sp|RL10E_THEPD|LARGE ribosomal subunit protein uL16|Thermofilum pendens (strain DSM

Query: 4 HFGTQP 9
HFGT P
Sbjct: 11 HFGTPP 16




142|SequenceR|715|706|ILLDSKEHHF

>sp|NEP1_PYRAR|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum arsenaticum

Query: 1 ILLDSKEHH 9
ILLD HH
Sbjct: 37 ILLDRSRHH 45


>sp|NEP1_PYRIL|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum islandicum

Query: 1 ILLDSKEHHF 10
ILLD HH
Sbjct: 37 ILLDRARHHL 46


>sp|NEP1_PYRAE|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum aerophilum

Query: 1 ILLDSKEHH 9
ILLD HH
Sbjct: 37 ILLDRARHH 45


>sp|NEP1_PYRNV|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum neutrophilum

Query: 1 ILLDSKEHH 9
ILLD HH
Sbjct: 37 ILLDRARHH 45


>sp|NEP1_PYRCJ|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum calidifontis

Query: 1 ILLDSKEHH 9
ILLD HH
Sbjct: 37 ILLDRARHH 45


>sp|NEP1_ARCFU|RIBOSOMAL RNA small subunit methyltransferase|Archaeoglobus fulgidus

Query: 1 ILLDSKEHH 9
ILLD +HH
Sbjct: 39 ILLDDSKHH 47


>sp|NEP1_THESM|RIBOSOMAL RNA small subunit methyltransferase|Thermococcus sibiricus

Query: 1 ILLDSKEHH 9
ILLDS HH
Sbjct: 38 ILLDSTYHH 46


>sp|NEP1_THEON|RIBOSOMAL RNA small subunit methyltransferase|Thermococcus onnurineus

Query: 1 ILLDSKEHH 9
+LLDS HH
Sbjct: 38 VLLDSTYHH 46


>sp|PUR8_METJA|ADENYLOSUCCINATE lyase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILLDSKEHH 9
ILLD E H
Sbjct: 144 ILLDKAEEH 152




143|SequenceR|720|711|TGFDLILLDS

>sp|SPEE_PYRHO|POLYAMINE aminopropyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TGFDLILLDS 10
+GFD+I++DS
Sbjct: 153 SGFDVIIVDS 162


>sp|SPEE_PYRAB|POLYAMINE aminopropyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 TGFDLILLDS 10
+GFD++++DS
Sbjct: 150 SGFDVVIVDS 159


>sp|DNLI1_KORCO|DNA ligase 1|Korarchaeum cryptofilum (strain OPF8)

Query: 3 FDLILLD 9
FDLILLD
Sbjct: 325 FDLILLD 331


>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 3 FDLILLDS 10
FDL+LLD+
Sbjct: 424 FDLLLLDA 431


>sp|SPEE_PYRFU|POLYAMINE aminopropyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GFDLILLDS 10
GFD+I+ DS
Sbjct: 152 GFDVIIADS 160


>sp|SRP54_STAMF|SIGNAL recognition particle 54 kDa|Staphylothermus marinus (strain ATCC

Query: 2 GFDLILLDS 10
GFD++++D+
Sbjct: 179 GFDIVIVDT 187


>sp|DTDA_CENSY|D-AMINOACYL-TRNA deacylase|Cenarchaeum symbiosum (strain A)

Query: 3 FDLILLDS 10
FDL+++DS
Sbjct: 36 FDLVIIDS 43


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 3 FDLILLD 9
FDLIL+D
Sbjct: 278 FDLILVD 284


>sp|NFI_IGNH4|ENDONUCLEASE V|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GFDLILLD 9
G+DL+L+D
Sbjct: 95 GYDLLLVD 102


>sp|SPEE_THEAC|POLYAMINE aminopropyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 FDLILLDS 10
FDLI++DS
Sbjct: 152 FDLIIIDS 159


>sp|SPEE_PICTO|POLYAMINE aminopropyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 3 FDLILLDS 10
FDLI++DS
Sbjct: 151 FDLIIIDS 158


>sp|G1PDH_PYRIL|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum islandicum (strain DSM 4184

Query: 1 TGFDLIL 7
+GFDL+L
Sbjct: 73 SGFDLVL 79


>sp|NTPTH_PYRHO|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TGFDLILLDS 10
TGF +I LD+
Sbjct: 46 TGFRVIALDT 55


>sp|TMCA_THES3|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus sp. (strain AM4)

Query: 3 FDLILLDS 10
FD++LLD+
Sbjct: 451 FDVLLLDA 458


>sp|TMCA_THEKO|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus kodakarensis (strain

Query: 3 FDLILLDS 10
FD++LLD+
Sbjct: 452 FDVLLLDA 459


>sp|TMCA_PYRFU|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus furiosus (strain ATCC

Query: 3 FDLILLDS 10
FD++LLD+
Sbjct: 451 FDVLLLDA 458


>sp|TMCA_PYRAB|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus abyssi (strain GE5 /

Query: 3 FDLILLDS 10
FD++LLD+
Sbjct: 451 FDVLLLDA 458


>sp|NTPTH_HYPBU|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Hyperthermus butylicus (strain DSM 5456

Query: 2 GFDLILLD 9
GF ++LLD
Sbjct: 50 GFKIVLLD 57


>sp|SPEE_THEON|POLYAMINE aminopropyltransferase|Thermococcus onnurineus (strain NA1)

Query: 3 FDLILLDS 10
FD+I++DS
Sbjct: 154 FDVIIVDS 161


>sp|ATGT_PYRFU|TRNA-GUANINE(15) transglycosylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GFDLILLDS 10
GFD+I+ +S
Sbjct: 56 GFDIIITNS 64


>sp|ATGT_PYRAB|TRNA-GUANINE(15) transglycosylase|Pyrococcus abyssi (strain GE5 /

Query: 2 GFDLILLDS 10
GFD+I+ +S
Sbjct: 56 GFDIIITNS 64


>sp|SYY_METJA|TYROSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GFDLILL 8
GFD+I+L
Sbjct: 59 GFDIIIL 65


>sp|SRP54_THEON|SIGNAL recognition particle 54 kDa|Thermococcus onnurineus (strain NA1)

Query: 2 GFDLILLDS 10
G D+I++DS
Sbjct: 182 GVDIIIVDS 190


>sp|SPEE_ARCFU|POLYAMINE aminopropyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FDLILLDS 10
FD+I++DS
Sbjct: 144 FDVIIVDS 151


>sp|SPEE_THEKO|POLYAMINE aminopropyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 3 FDLILLDS 10
FD+I++DS
Sbjct: 160 FDVIIVDS 167


>sp|SPEE_THEVO|POLYAMINE aminopropyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 FDLILLDS 10
FDL+++DS
Sbjct: 152 FDLVIIDS 159


>sp|PHAC_HALMT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloferax mediterranei (strain ATCC 33500

Query: 2 GFDLILLD 9
GFD+ L+D
Sbjct: 100 GFDVYLID 107


>sp|PSB2_PYRAR|PROTEASOME subunit beta 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GFDLILLD 9
G DL+L+D
Sbjct: 181 GIDLVLID 188




144|SequenceR|725|716|SNLQFTGFDL

>sp|Y886_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0886|Methanocaldococcus

Query: 2 NLQFTGFDL 10
N+QFTG D+
Sbjct: 141 NIQFTGSDI 149


>sp|Y453_METAC|UNCHARACTERIZED glycosyltransferase MA_0453|Methanosarcina acetivorans (strain ATCC

Query: 2 NLQFTGF 8
N++FTGF
Sbjct: 258 NVEFTGF 264


>sp|Y582_METMA|UNCHARACTERIZED glycosyltransferase MM_0582|Methanosarcina mazei (strain ATCC

Query: 2 NLQFTGF 8
N++FTGF
Sbjct: 258 NVEFTGF 264


>sp|EF2_METB6|ELONGATION factor 2|Methanoregula boonei (strain DSM 21154

Query: 2 NLQFTGFDL 10
N +F GF+L
Sbjct: 691 NTEFAGFEL 699


>sp|Y1488_METJA|UNCHARACTERIZED protein MJ1488|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SNLQFTGFDL 10
+NL++ GF L
Sbjct: 39 TNLKYEGFQL 48


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 5 FTGFDL 10
+TGFDL
Sbjct: 232 YTGFDL 237


>sp|CCA_METAC|CCA-ADDING enzyme|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 NLQFTGFDL 10
N+ F GFD+
Sbjct: 116 NIVFKGFDV 124


>sp|Y2028_ARCFU|UNCHARACTERIZED protein AF_2028|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SNLQFTGFD 9
+N+Q +G+D
Sbjct: 497 TNIQLSGYD 505


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 1 SNLQFTG 7
SN++FTG
Sbjct: 829 SNMKFTG 835




145|SequenceR|730|721|LGQDKSNLQF

>sp|XPB1_SULTO|DNA 3'-5' helicase/translocase StoXPB1|Sulfurisphaera tokodaii

Query: 1 LGQDKSNLQF 10
LG+DK+ QF
Sbjct: 27 LGRDKNGSQF 36




146|SequenceR|735|726|NTTKQLGQDK

>sp|RTCB_NANEQ|TRNA-SPLICING ligase RtcB|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 NTTKQLGQDK 10
NT KQ G+D+
Sbjct: 184 NTAKQRGKDQ 193


>sp|FWDC_METTH|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 3 TKQLGQD 9
TK++GQD
Sbjct: 76 TKRIGQD 82




147|SequenceR|740|731|EELSSNTTKQ

***** No hits found ******


148|SequenceR|745|736|AKDMIEELSS

>sp|APGM_SULAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 AKDMIEELSS 10
AKD+++EL+S
Sbjct: 122 AKDLVQELNS 131


>sp|CMR5_SACS2|CRISPR system CMR subunit Cmr5|Saccharolobus solfataricus (strain ATCC

Query: 1 AKDMIEELSS 10
A+DM+EE+ +
Sbjct: 36 ARDMVEEIYT 45


>sp|PMDHS_METKA|PHOSPHOMEVALONATE dehydratase small subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 KDMIEELSS 10
+D++EELS+
Sbjct: 113 RDLVEELST 121


>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 2 KDMIEEL 8
KDM+EE+
Sbjct: 280 KDMVEEI 286


>sp|RL7A_STAMF|LARGE ribosomal subunit protein eL8|Staphylothermus marinus (strain ATCC

Query: 1 AKDMIEEL 8
AKD++EE+
Sbjct: 108 AKDLVEEI 115


>sp|AROD_THEVO|3-DEHYDROQUINATE dehydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 AKDMIEEL 8
+KDMIE+L
Sbjct: 131 SKDMIEKL 138


>sp|RL7A_IGNH4|LARGE ribosomal subunit protein eL8|Ignicoccus hospitalis (strain KIN4/I

Query: 1 AKDMIEEL 8
AKD++EE+
Sbjct: 108 AKDLVEEI 115


>sp|RPO4_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo4|Saccharolobus shibatae (strain ATCC

Query: 1 AKDMIEELSS 10
A+ ++EELSS
Sbjct: 52 AQKVVEELSS 61




149|SequenceR|750|741|DFKDYAKDMI

>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 3 KDYAKDMI 10
KDYAKD I
Sbjct: 82 KDYAKDYI 89


>sp|ACDB2_PYRFU|ACETATE--COA ligase [ADP-forming] II subunit|Pyrococcus furiosus (strain ATCC

Query: 1 DFKDYAKDM 9
D KDY K+M
Sbjct: 203 DLKDYIKEM 211


>sp|PRIS_HYPBU|DNA primase small subunit PriS|Hyperthermus butylicus (strain DSM 5456

Query: 1 DFKDYAK 7
DF DYAK
Sbjct: 177 DFDDYAK 183


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 1 DFKDYAK 7
DFKDY++
Sbjct: 225 DFKDYSE 231


>sp|MCRC_METTM|METHYL-COENZYME M reductase I operon|Methanothermobacter marburgensis (strain ATCC

Query: 1 DFKDYAK 7
DF+D+AK
Sbjct: 141 DFEDFAK 147


>sp|MCRC_METTH|METHYL-COENZYME M reductase I operon|Methanothermobacter thermautotrophicus (strain

Query: 1 DFKDYAK 7
DF+D+AK
Sbjct: 141 DFEDFAK 147


>sp|Y3515_METJA|UNCHARACTERIZED ATP-binding protein MJECL15|Methanocaldococcus jannaschii (strain

Query: 1 DFKDYAKDM 9
DF++YAK +
Sbjct: 85 DFREYAKSL 93


>sp|Y1609_METJA|UNCHARACTERIZED ATP-binding protein MJ1609|Methanocaldococcus jannaschii (strain

Query: 1 DFKDYAKDM 9
DF++YAK +
Sbjct: 85 DFREYAKSL 93


>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 FKDYAKDMI 10
FK+YA+++I
Sbjct: 409 FKEYAENLI 417


>sp|RL3_AERPE|LARGE ribosomal subunit protein uL3|Aeropyrum pernix (strain ATCC 700893

Query: 4 DYAKDMI 10
DYAKD++
Sbjct: 181 DYAKDVL 187


>sp|Y971_METJA|UNCHARACTERIZED protein MJ0971|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DFKDYAKDM 9
DFK++AK +
Sbjct: 233 DFKEFAKTI 241


>sp|TSR3_METS3|16S rRNA aminocarboxypropyltransferase|Methanobrevibacter smithii

Query: 2 FKDYAKDMI 10
FKD AKD++
Sbjct: 122 FKDEAKDIL 130


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KDYAKDMI 10
K+YAKD I
Sbjct: 82 KEYAKDYI 89


>sp|RS5_PYRHO|SMALL ribosomal subunit protein uS5|Pyrococcus horikoshii (strain ATCC

Query: 1 DFKDYAKDMI 10
D+K+YAK ++
Sbjct: 4 DWKEYAKRVL 13


>sp|SYK_AERPE|LYSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DFKDYAKD 8
DF+ Y KD
Sbjct: 240 DFEPYGKD 247


>sp|AATC_DESSY|A-TYPE ATP synthase subunit C|Desulfurococcus sp. (strain SY)

Query: 1 DFKDYAKDM 9
D+KDY D+
Sbjct: 73 DYKDYLADV 81


>sp|GLYA_CENSY|SERINE hydroxymethyltransferase|Cenarchaeum symbiosum (strain A)

Query: 3 KDYAKDMI 10
K YAKD++
Sbjct: 291 KKYAKDVV 298


>sp|G3P_METBR|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium bryantii

Query: 2 FKDYAKDM 9
F +YAKD+
Sbjct: 263 FMEYAKDL 270


>sp|GGR_METMA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FKDYAKDMI 10
FKD AK++I
Sbjct: 395 FKDAAKEVI 403


>sp|CCA_METJA|CCA-ADDING enzyme|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FKDYAKDM 9
FKDYAK +
Sbjct: 280 FKDYAKKL 287


>sp|COFH_METM5|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C5 /

Query: 2 FKDYAKDM 9
FKDY K++
Sbjct: 281 FKDYIKNI 288


>sp|RFCL_METM6|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C6 /

Query: 3 KDYAKDMI 10
KDYA D+I
Sbjct: 61 KDYAYDVI 68


>sp|COFH1_METMP|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanococcus maripaludis (strain DSM

Query: 2 FKDYAKDM 9
FKDY K++
Sbjct: 281 FKDYIKNI 288


>sp|AGOG_METMP|N-GLYCOSYLASE/DNA lyase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DFKDYAKDM 9
DFK Y DM
Sbjct: 127 DFKTYYSDM 135




150|SequenceR|755|746|NKIEVDFKDY

>sp|KHSE_PYRFU|HOMOSERINE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NKIEVDFK 8
+ IEVDFK
Sbjct: 152 HNIEVDFK 159


>sp|COBQ_THEON|PROBABLE cobyric acid synthase|Thermococcus onnurineus (strain NA1)

Query: 3 IEVDFKDY 10
+E++ KDY
Sbjct: 139 VEINLKDY 146


>sp|COBQ_THEKO|PROBABLE cobyric acid synthase|Thermococcus kodakarensis (strain ATCC

Query: 3 IEVDFKDY 10
+E++ KDY
Sbjct: 139 VEINLKDY 146


>sp|Y685_METJA|UNCHARACTERIZED ATP-binding protein MJ0685|Methanocaldococcus jannaschii (strain

Query: 1 NKIEVDFKD 9
N++EV FKD
Sbjct: 173 NELEVKFKD 181


>sp|CAH_METTT|CARBONIC anhydrase|Methanosarcina thermophila (strain ATCC 43570

Query: 1 NKIEVDFKDY 10
N +EVD K+Y
Sbjct: 130 NIVEVDGKEY 139


>sp|PSTK_METMP|L-SERYL-TRNA(SEC) kinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KIEVDFKDY 10
KIE DF DY
Sbjct: 241 KIEKDFLDY 249


>sp|COBQ_THEGJ|PROBABLE cobyric acid synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 IEVDFKDY 10
+E++ KDY
Sbjct: 139 VEINLKDY 146


>sp|Y1664_METJA|UNCHARACTERIZED protein MJ1664|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NKIEVDFKDY 10
N+I+ DFKD+
Sbjct: 84 NEIKKDFKDF 93


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 KIEVDF 7
KIEVDF
Sbjct: 99 KIEVDF 104


>sp|ARFB_METFV|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanothermus fervidus (strain ATCC

Query: 4 EVDFKDY 10
E+DFK Y
Sbjct: 177 EIDFKKY 183


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IEVDFKD 9
IEV+FKD
Sbjct: 657 IEVEFKD 663


>sp|COBQ_PYRFU|PROBABLE cobyric acid synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 IEVDFKDY 10
+E++ KDY
Sbjct: 139 VEINLKDY 146




151|SequenceR|760|751|FLLQVNKIEV

***** No hits found ******


152|SequenceR|765|756|EEARAFLLQV

>sp|RL21_METBU|LARGE ribosomal subunit protein eL21|Methanococcoides burtonii (strain

Query: 1 EEARAFLLQV 10
+ RA+LLQV
Sbjct: 67 KRGRAYLLQV 76


>sp|RFRNP_HYPBU|RNA-FREE ribonuclease P|Hyperthermus butylicus (strain DSM 5456

Query: 1 EEARAFLLQ 9
EEAR FLL
Sbjct: 64 EEARRFLLS 72


>sp|TIAS_IGNH4|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignicoccus hospitalis (strain

Query: 1 EEARAFL 7
EEA+AFL
Sbjct: 70 EEAKAFL 76


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 EEARAFLLQV 10
EEA FL++V
Sbjct: 413 EEASGFLMRV 422


>sp|GATB_METS3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 1 EEARAFLLQV 10
EEAR FL ++
Sbjct: 148 EEARTFLKEL 157




153|SequenceR|770|761|CKKWTEEARA

>sp|TRM1_HALWD|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloquadratum walsbyi

Query: 1 CKKWTEEA 8
CKKWT A
Sbjct: 332 CKKWTRSA 339


>sp|Y1332_METJA|UNCHARACTERIZED GTP-binding protein MJ1332|Methanocaldococcus jannaschii (strain

Query: 3 KWTEE 7
KWTEE
Sbjct: 195 KWTEE 199


>sp|RL6_PICTO|LARGE ribosomal subunit protein uL6|Picrophilus torridus (strain ATCC

Query: 3 KWTEEA 8
KWTE+A
Sbjct: 3 KWTEQA 8


>sp|T1R2_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 KKWTEE 7
KKWTE+
Sbjct: 619 KKWTED 624


>sp|RFCL_PYRAR|REPLICATION factor C large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 KWTEEARA 10
+W +EARA
Sbjct: 259 RWFDEARA 266


>sp|RFCL_PYRCJ|REPLICATION factor C large subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 KWTEEARA 10
+W +EARA
Sbjct: 258 RWFDEARA 265




154|SequenceR|775|766|PHQFRCKKWT

>sp|Y1068_METJA|UNCHARACTERIZED membrane protein MJ1068|Methanocaldococcus jannaschii (strain ATCC

Query: 2 HQFRCKKW 9
HQF KKW
Sbjct: 436 HQFLNKKW 443


>sp|TRM1_HALWD|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloquadratum walsbyi

Query: 6 CKKWT 10
CKKWT
Sbjct: 332 CKKWT 336


>sp|TFE_METKA|TRANSCRIPTION factor E|Methanopyrus kandleri (strain AV19 /

Query: 2 HQFRCKK 8
H+FRC K
Sbjct: 143 HEFRCPK 149


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PHQFRCK 7
PH +RCK
Sbjct: 403 PHCWRCK 409


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PHQFRCK 7
PH +RCK
Sbjct: 408 PHCWRCK 414


>sp|PGP_PYRAE|PHOSPHOGLYCOLATE phosphatase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HQFRCKKW 9
HQ +C+K+
Sbjct: 103 HQNKCRKY 110


>sp|AATC_METTH|A-TYPE ATP synthase subunit C|Methanothermobacter thermautotrophicus

Query: 1 PHQFRCKKW 9
PH ++ ++W
Sbjct: 272 PHGYQIREW 280


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PHQFRCK 7
PH +RCK
Sbjct: 403 PHCWRCK 409


>sp|Y580_METJA|UNCHARACTERIZED protein MJ0580|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PHQFRCKKW 9
PH RC+K+
Sbjct: 23 PHFGRCEKF 31


>sp|CPGS_PYRFU|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus furiosus (strain ATCC

Query: 3 QFRCKKW 9
+FR K+W
Sbjct: 106 EFRAKEW 112


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PHQFRCK 7
PH +RCK
Sbjct: 402 PHCWRCK 408


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PHQFRCK 7
PH +RCK
Sbjct: 402 PHCWRCK 408


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PHQFRCK 7
PH +RCK
Sbjct: 402 PHCWRCK 408


>sp|SYS_METLZ|SERINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 HQFRCKKW 9
H F K+W
Sbjct: 373 HDFESKQW 380


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 PHQFRCK 7
PH +RCK
Sbjct: 402 PHCWRCK 408


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 5 RCKKW 9
+CKKW
Sbjct: 681 KCKKW 685




155|SequenceR|780|771|IHMTSPHQFR

>sp|PYRE_CENSY|OROTATE phosphoribosyltransferase|Cenarchaeum symbiosum (strain A)

Query: 4 TSPHQFR 10
+ PHQFR
Sbjct: 41 SHPHQFR 47


>sp|PYRB_METKA|ASPARTATE carbamoyltransferase catalytic subunit|Methanopyrus kandleri

Query: 1 IHMTSPHQFR 10
IH+ SP + R
Sbjct: 184 IHLISPEELR 193


>sp|HIS8_NATPD|HISTIDINOL-PHOSPHATE aminotransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IHMTSPH 7
+++TSPH
Sbjct: 158 VYLTSPH 164


>sp|HIS8_HALMA|HISTIDINOL-PHOSPHATE aminotransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 IHMTSPH 7
+++TSPH
Sbjct: 158 VYLTSPH 164


>sp|HIS8_HALLT|HISTIDINOL-PHOSPHATE aminotransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 IHMTSPH 7
+++TSPH
Sbjct: 158 VYLTSPH 164




156|SequenceR|785|776|DMPQLIHMTS

>sp|SYP_NANEQ|PROLINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 DMPQLIHMTS 10
D+P +I+MT+
Sbjct: 124 DLPLIIYMTN 133


>sp|DCDB_METJA|DCTP deaminase, dUMP-forming|Methanocaldococcus jannaschii (strain ATCC

Query: 2 MPQLIHM 8
MP LIH+
Sbjct: 192 MPSLIHL 198


>sp|ACD_METJA|ACETATE--COA ligase [ADP-forming]|Methanocaldococcus jannaschii (strain ATCC

Query: 3 PQLIHMT 9
PQ+IH T
Sbjct: 534 PQIIHKT 540




157|SequenceR|790|781|LEVHIDMPQL

>sp|AATC_METTP|A-TYPE ATP synthase subunit C|Methanothrix thermoacetophila (strain DSM

Query: 1 LEVHIDMPQL 10
LEV ID PQ
Sbjct: 88 LEVSIDEPQF 97


>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 3 VHIDMPQ 9
VHID+P+
Sbjct: 153 VHIDLPK 159


>sp|GLMS_HALSA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Halobacterium salinarum (strain ATCC

Query: 1 LEVHIDMP 8
LE H D+P
Sbjct: 310 LETHADLP 317


>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 3 VHIDMPQ 9
VHID+P+
Sbjct: 153 VHIDLPK 159


>sp|CSX1_METJA|CRISPR system endoribonuclease Csx1|Methanocaldococcus jannaschii (strain

Query: 1 LEVHIDM 7
LEVH+D+
Sbjct: 130 LEVHLDL 136


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 EVHIDMPQL 10
E+H+++P+L
Sbjct: 507 EIHMNLPEL 515


>sp|LEUC_METS5|3-ISOPROPYLMALATE dehydratase large subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 LEVHIDMPQ 9
+EVH++ P+
Sbjct: 193 IEVHVENPK 201


>sp|URE1_NATPD|UREASE subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LEVHIDMPQL 10
+ VH + PQL
Sbjct: 139 IHVHFNSPQL 148


>sp|MPTA_HALSA|GTP cyclohydrolase MptA|Halobacterium salinarum (strain ATCC 700922

Query: 1 LEVHIDMPQ 9
EV++D+P+
Sbjct: 47 FEVYVDLPR 55


>sp|MPTA_HALS3|GTP cyclohydrolase MptA|Halobacterium salinarum (strain ATCC 29341

Query: 1 LEVHIDMPQ 9
EV++D+P+
Sbjct: 47 FEVYVDLPR 55


>sp|PCNA_PYRAB|DNA polymerase sliding clamp|Pyrococcus abyssi (strain GE5 /

Query: 2 EVHIDMPQL 10
E+ +D+P+L
Sbjct: 120 EIEVDLPEL 128


>sp|Y644_THEKO|UNCHARACTERIZED protein TK0644|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 VHIDMPQL 10
VHI +P+L
Sbjct: 9 VHIGLPEL 16




158|SequenceR|795|786|VMAKALEVHI

>sp|TDH_THEON|L-THREONINE 3-dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 1 VMAKALEVH 9
V+ KALEVH
Sbjct: 281 VIFKALEVH 289


>sp|ARGDC_IGNH4|ARGININE decarboxylase proenzyme|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VMAKALEVHI 10
VMA LE HI
Sbjct: 73 VMALVLESHI 82


>sp|TDH_THEKO|L-THREONINE 3-dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VMAKALEVH 9
++ KALEVH
Sbjct: 281 IIFKALEVH 289


>sp|LEU1_SULAC|2-ISOPROPYLMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VMAKALEVHI 10
VMA A +VH+
Sbjct: 219 VMAGARQVHV 228


>sp|LEU1_SULTO|2-ISOPROPYLMALATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VMAKALEVHI 10
VMA A +VH+
Sbjct: 219 VMAGARQVHV 228




159|SequenceR|800|791|RIDKEVMAKA

>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IDKEVMAK 9
IDKE++AK
Sbjct: 271 IDKEILAK 278


>sp|GYAR_PYRHO|GLYOXYLATE reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RIDKEVMAKA 10
RIDKEV A
Sbjct: 56 RIDKEVFENA 65


>sp|GYAR_PYRAB|GLYOXYLATE reductase|Pyrococcus abyssi (strain GE5 /

Query: 1 RIDKEVMAKA 10
RID+EV +A
Sbjct: 57 RIDREVFERA 66


>sp|Y1548_ARCFU|UNCHARACTERIZED protein AF_1548|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RIDKEVM 7
RIDKEV+
Sbjct: 124 RIDKEVL 130


>sp|RL30_THEKO|LARGE ribosomal subunit protein uL30|Thermococcus kodakarensis (strain

Query: 2 IDKEVMAK 9
IDKE +AK
Sbjct: 59 IDKETLAK 66


>sp|TOP6B_PYRAE|TYPE 2 DNA topoisomerase 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RIDKEVMAK 9
RI+KE +AK
Sbjct: 481 RIEKESLAK 489


>sp|RL1_METKA|LARGE ribosomal subunit protein uL1|Methanopyrus kandleri (strain AV19

Query: 1 RIDKEVM 7
RIDKEV+
Sbjct: 45 RIDKEVV 51




160|SequenceR|805|796|KFRAMRIDKE

>sp|SYFB_THEPD|PHENYLALANINE--TRNA ligase beta subunit|Thermofilum pendens (strain DSM 2475

Query: 2 FRAMRIDKE 10
RAMR+D E
Sbjct: 298 LRAMRMDAE 306


>sp|PHOU_ARCFU|PHOSPHATE-SPECIFIC transport system accessory protein|Archaeoglobus fulgidus (strain

Query: 2 FRAMRIDK 9
FRAMR DK
Sbjct: 30 FRAMRGDK 37


>sp|RS19_KORCO|SMALL ribosomal subunit protein uS19|Korarchaeum cryptofilum (strain

Query: 1 KFRAMRIDK 9
K++AM IDK
Sbjct: 53 KYKAMGIDK 61


>sp|HEM1_METLZ|GLUTAMYL-TRNA reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 KFRAMRIDK 9
K RAMR+D+
Sbjct: 217 KGRAMRLDQ 225




161|SequenceR|810|801|LGGSVKFRAM

>sp|SYR_PYRIL|ARGININE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GGSVKFRA 9
GG+V FRA
Sbjct: 336 GGAVVFRA 343


>sp|SYR_PYRAE|ARGININE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GGSVKFRA 9
GG+V FRA
Sbjct: 336 GGAVVFRA 343


>sp|SYR_PYRAR|ARGININE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GGSVKFRA 9
GG+V FRA
Sbjct: 336 GGAVVFRA 343


>sp|RS8E_METPE|SMALL ribosomal subunit protein eS8|Methanosphaerula palustris (strain

Query: 2 GGSVKFRAM 10
GG+VK RA+
Sbjct: 48 GGNVKVRAL 56


>sp|Y1185_METJA|UNCHARACTERIZED protein MJ1185|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GGSVKFRA 9
GGSV +RA
Sbjct: 184 GGSVLYRA 191




162|SequenceR|815|806|VHMLPLGGSV

>sp|Y419_ARCFU|UNCHARACTERIZED protein AF_0419|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VHMLPLGGS 9
VH+LPL GS
Sbjct: 9 VHLLPLPGS 17


>sp|Y1062_PYRAB|UNCHARACTERIZED protein PYRAB10620|Pyrococcus abyssi (strain GE5 /

Query: 1 VHMLPLGGS 9
VH+LPL GS
Sbjct: 12 VHLLPLPGS 20


>sp|SRP54_METAR|SIGNAL recognition particle 54 kDa|Methanocella arvoryzae (strain DSM

Query: 3 MLPLGG 8
MLPLGG
Sbjct: 344 MLPLGG 349


>sp|SRP54_METBU|SIGNAL recognition particle 54 kDa|Methanococcoides burtonii (strain DSM

Query: 1 VHMLPLGG 8
+ MLPLGG
Sbjct: 342 MQMLPLGG 349


>sp|CAS2B_SACS2|CRISPR-ASSOCIATED endoribonuclease Cas2 2|Saccharolobus solfataricus (strain ATCC

Query: 1 VHMLPLG 7
VH++PLG
Sbjct: 62 VHIIPLG 68


>sp|HISX_PYRFU|HISTIDINOL dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HMLPLGGS 9
H+LP GG+
Sbjct: 315 HVLPTGGA 322


>sp|HISX_HALMA|HISTIDINOL dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 2 HMLPLGGS 9
H+LP GG+
Sbjct: 361 HVLPTGGN 368


>sp|CAS1A_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 HMLPLGGS 9
H LPLG S
Sbjct: 80 HFLPLGRS 87


>sp|GLMU_META3|BIFUNCTIONAL protein GlmU|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 MLPLGGS 9
MLP+GG+
Sbjct: 25 MLPVGGA 31


>sp|HISX_THEKO|HISTIDINOL dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 HMLPLGGS 9
H+LP GG+
Sbjct: 316 HVLPTGGA 323


>sp|MTRD_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina mazei (strain ATCC

Query: 1 VHMLPLGGS 9
VH +P+GG+
Sbjct: 26 VHFVPVGGA 34


>sp|MTRD_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanocaldococcus jannaschii

Query: 1 VHMLPLGGS 9
VH +P+GG+
Sbjct: 24 VHFIPVGGA 32


>sp|HISX_NATPD|HISTIDINOL dehydrogenase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 HMLPLGG 8
H+LP GG
Sbjct: 361 HVLPTGG 367


>sp|HISX_METKA|HISTIDINOL dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 HMLPLGG 8
H+LP GG
Sbjct: 370 HVLPTGG 376


>sp|MTRD_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina acetivorans (strain

Query: 1 VHMLPLGGS 9
VH +P+GG+
Sbjct: 26 VHFVPVGGA 34


>sp|MTRD_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina barkeri (strain

Query: 1 VHMLPLGGS 9
VH +P+GG+
Sbjct: 26 VHFVPVGGA 34


>sp|NADE_METTH|NH(3)-DEPENDENT NAD(+) synthetase|Methanothermobacter thermautotrophicus (strain

Query: 1 VHMLPLGG 8
V MLP+GG
Sbjct: 156 VDMLPIGG 163


>sp|MTRD_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanothermobacter marburgensis

Query: 1 VHMLPLGGS 9
VH +P+GG+
Sbjct: 21 VHFVPVGGA 29


>sp|MTRD_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanothermobacter

Query: 1 VHMLPLGGS 9
VH +P+GG+
Sbjct: 21 VHFVPVGGA 29


>sp|MTRD_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanococcus maripaludis (strain

Query: 1 VHMLPLGGS 9
VH +P+GG+
Sbjct: 24 VHFVPVGGA 32


>sp|GCH3_AERPE|GTP cyclohydrolase III|Aeropyrum pernix (strain ATCC 700893

Query: 3 MLPLGGSV 10
+LPL GSV
Sbjct: 183 VLPLNGSV 190


>sp|SYFB_KORCO|PHENYLALANINE--TRNA ligase beta subunit|Korarchaeum cryptofilum (strain OPF8)

Query: 1 VHMLPLG 7
VH +PLG
Sbjct: 158 VHFVPLG 164


>sp|Y1236_METTH|UNCHARACTERIZED protein MTH_1236|Methanothermobacter thermautotrophicus (strain

Query: 2 HMLPLGGSV 10
HM+ LGG +
Sbjct: 15 HMISLGGYI 23


>sp|MTRD_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanopyrus kandleri (strain AV19

Query: 1 VHMLPLGGS 9
VH +P+GG+
Sbjct: 22 VHYVPVGGA 30


>sp|COBS2_ARCFU|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LPLGGSV 10
LPLGG V
Sbjct: 15 LPLGGDV 21


>sp|Y1118_PICTO|UPF0173 metal-dependent hydrolase PTO1118|Picrophilus torridus (strain ATCC

Query: 3 MLPLGG 8
MLP+GG
Sbjct: 154 MLPIGG 159


>sp|HISX_PYRAE|HISTIDINOL dehydrogenase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HMLPLGGS 9
H+LP GG+
Sbjct: 313 HVLPTGGT 320




163|SequenceR|820|811|QDSIRVHMLP

>sp|NADB_PYRHO|L-ASPARTATE oxidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DSIRVHML 9
DSIR+H+L
Sbjct: 56 DSIRIHVL 63


>sp|NADB_PYRAB|L-ASPARTATE oxidase|Pyrococcus abyssi (strain GE5 /

Query: 2 DSIRVHML 9
DSIR+H+L
Sbjct: 56 DSIRIHVL 63


>sp|CCA_THEVO|CCA-ADDING enzyme|Thermoplasma volcanium (strain ATCC 51530

Query: 2 DSIRVHMLP 10
DSIR+H+ P
Sbjct: 332 DSIRIHVGP 340


>sp|IDI2_PYRHO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DSIRVHMLP 10
D+I +HM P
Sbjct: 157 DAIAIHMNP 165


>sp|IDI2_PYRFU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DSIRVHMLP 10
D+I +HM P
Sbjct: 158 DAIAIHMNP 166


>sp|IDI2_PYRAB|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus abyssi (strain GE5 /

Query: 2 DSIRVHMLP 10
D+I +HM P
Sbjct: 156 DAIAIHMNP 164


>sp|AATE_NATPD|A-TYPE ATP synthase subunit E|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DSIRVH 7
DS+RVH
Sbjct: 119 DSVRVH 124




164|SequenceR|825|816|VDKMKQDSIR

>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter thermautotrophicus

Query: 1 VDKMKQDSIR 10
VDKMK+ IR
Sbjct: 220 VDKMKELRIR 229


>sp|UREG_METS5|UREASE accessory protein UreG|Metallosphaera sedula (strain ATCC 51363

Query: 1 VDKMKQDSIR 10
++KM++DS+R
Sbjct: 162 LNKMREDSLR 171


>sp|Y1546_ARCFU|UNCHARACTERIZED MscS family protein AF_1546|Archaeoglobus fulgidus (strain ATCC

Query: 1 VDKMKQDSI 9
+DKMK+D +
Sbjct: 47 IDKMKRDQL 55


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VDKMKQDSIR 10
+DKM+Q +R
Sbjct: 123 IDKMRQTMLR 132


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus

Query: 1 VDKMKQDSIR 10
VD+MK SIR
Sbjct: 11 VDEMKNVSIR 20


>sp|TOP6B_PYRAE|TYPE 2 DNA topoisomerase 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VDKMKQ 6
VDKMKQ
Sbjct: 292 VDKMKQ 297


>sp|RTCB_AERPE|TRNA-SPLICING ligase RtcB|Aeropyrum pernix (strain ATCC 700893

Query: 1 VDKMKQD 7
++KMKQD
Sbjct: 35 IEKMKQD 41


>sp|RTCB_THEKO|TRNA-SPLICING ligase RtcB|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VDKMKQD 7
++KMKQD
Sbjct: 37 IEKMKQD 43




165|SequenceR|830|821|NMLYLVDKMK

>sp|HYD2D_PYRFU|SULFHYDROGENASE 2 subunit delta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NMLYLVDKM 9
N+L+L DK+
Sbjct: 17 NLLFLYDKL 25


>sp|SPEH_THEAC|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 YLVDKMK 10
YLVDK++
Sbjct: 96 YLVDKLR 102


>sp|IF6_THEVO|TRANSLATION initiation factor 6|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NMLYLVDKM 9
N+LYL DK+
Sbjct: 88 NVLYLKDKI 96


>sp|TOP6B_PYRAE|TYPE 2 DNA topoisomerase 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 MLYLVDKMK 10
++ LVDKMK
Sbjct: 288 LVKLVDKMK 296




166|SequenceR|835|826|PLPISNMLYL

>sp|GATE_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanobrevibacter smithii (strain ATCC

Query: 1 PLPISNMLYL 10
PLP +N +YL
Sbjct: 413 PLPTANRMYL 422


>sp|GATE_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanothermobacter thermautotrophicus

Query: 1 PLPISNMLYL 10
PLP S+ +YL
Sbjct: 413 PLPTSSRMYL 422


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 2 LPISNMLY 9
LPI+N+L+
Sbjct: 317 LPITNILF 324


>sp|ENO_PYRHO|ENOLASE horikoshii (strain ATCC 700860

Query: 1 PLPISNML 8
P+P+SN++
Sbjct: 144 PVPLSNVI 151


>sp|ENO_PYRFU|ENOLASE furiosus (strain ATCC 43587

Query: 1 PLPISNML 8
P+P+SN++
Sbjct: 144 PVPLSNVI 151


>sp|ENO_PYRAB|ENOLASE abyssi (strain GE5 /

Query: 1 PLPISNML 8
P+P+SN++
Sbjct: 144 PVPLSNVI 151




167|SequenceR|840|831|ASSKQPLPIS

>sp|SYDND_METTH|ASPARTATE--TRNA(ASP/ASN) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 SKQPLPI 9
SKQPLP+
Sbjct: 106 SKQPLPL 112


>sp|Y2022_ARCFU|UNCHARACTERIZED protein AF_2022|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SSKQPLPIS 10
S K+P PIS
Sbjct: 87 SDKEPTPIS 95


>sp|ENDA_METAC|TRNA-SPLICING endonuclease|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 SSKQPLPI 9
S +QPLP+
Sbjct: 121 SERQPLPV 128


>sp|OGT_METVM|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanocaldococcus vulcanius (strain ATCC 700851

Query: 1 ASSKQPLPI 9
A SK PLP+
Sbjct: 116 ALSKNPLPL 124


>sp|PSB1_PYRAE|PROTEASOME subunit beta 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 KQPLPIS 10
K+P+PIS
Sbjct: 72 KRPIPIS 78


>sp|HBCAL_NITMS|4-HYDROXYBUTYRATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 1 ASSKQPLP 8
A SKQPLP
Sbjct: 291 AFSKQPLP 298


>sp|CFBE_METAC|COENZYME F(430) synthetase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 SKQPLPIS 10
SK PLP+S
Sbjct: 57 SKAPLPVS 64




168|SequenceR|845|836|REPSQASSKQ

>sp|PYRI_HALWD|ASPARTATE carbamoyltransferase regulatory chain|Haloquadratum walsbyi

Query: 1 REPSQASSKQ 10
REP+Q SK+
Sbjct: 4 REPNQKESKE 13




169|SequenceR|850|841|ISSVQREPSQ

>sp|BIOD_HALMT|ATP-DEPENDENT dethiobiotin synthetase BioD|Haloferax mediterranei (strain ATCC

Query: 1 ISSVQREP 8
+SSV+R+P
Sbjct: 223 LSSVERDP 230




170|SequenceR|855|846|GSIIPISSVQ

>sp|PMDHL_METJA|PHOSPHOMEVALONATE dehydratase large subunit|Methanocaldococcus jannaschii (strain

Query: 3 IIPISSVQ 10
+IPISS Q
Sbjct: 38 LIPISSAQ 45


>sp|IF2P_METTH|PROBABLE translation initiation factor IF-2|Methanothermobacter

Query: 2 SIIPISSV 9
SIIPIS++
Sbjct: 193 SIIPISAI 200


>sp|RL3_METH6|LARGE ribosomal subunit protein uL3|Methanothrix harundinacea (strain

Query: 1 GSIIPISSV 9
GS +PISS+
Sbjct: 181 GSSVPISSI 189




171|SequenceR|860|851|LGKTGGSIIP

>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 1 LGKTGGSII 9
LG TGGSI+
Sbjct: 174 LGGTGGSIV 182


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 3 KTGGSIIP 10
K GG+IIP
Sbjct: 1223 KCGGNIIP 1230


>sp|ARLY_PYRFU|ARGININOSUCCINATE lyase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LGKTGG 6
LGKTGG
Sbjct: 90 LGKTGG 95


>sp|CS3HE_METJA|CRISPR-ASSOCIATED helicase Cas3|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GKTGGSIIP 10
GKT +IIP
Sbjct: 45 GKTEAAIIP 53


>sp|LYSZ_PYRAB|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrococcus abyssi

Query: 3 KTGGSIIP 10
K GGS++P
Sbjct: 5 KVGGSVVP 12


>sp|COOS_METJA|CARBON monoxide dehydrogenase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GKTGGSIIP 10
G TGG +IP
Sbjct: 592 GLTGGKLIP 600


>sp|QUEC_METTH|7-CYANO-7-DEAZAGUANINE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LGKTGGSII 9
LG+ GGS++
Sbjct: 64 LGRLGGSVL 72


>sp|CSG_METMA|MAJOR S-layer protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GKTGGSIIP 10
G GG++IP
Sbjct: 355 GLNGGNVIP 363


>sp|Y3535_METJA|UNCHARACTERIZED protein MJECL35|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KTGGSIIP 10
KTG S++P
Sbjct: 169 KTGDSLVP 176


>sp|Y942_METJA|PROBABLE ATP-dependent helicase MJ0942|Methanocaldococcus jannaschii

Query: 1 LGKTGGSIIP 10
+GKT G +IP
Sbjct: 45 VGKTLGYLIP 54


>sp|GLFT_THEAC|GLUTAMATE formimidoyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LGKTGGSII 9
+GK G SII
Sbjct: 168 VGKAGASII 176


>sp|CPKA_PYRAB|CARBAMATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 GKTGGSIIP 10
GKTG +IP
Sbjct: 306 GKTGTQVIP 314


>sp|ARGD_METJA|ACETYLORNITHINE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGKTGGSII 9
LG+ GG II
Sbjct: 124 LGREGGEII 132




172|SequenceR|865|856|LSTGLLGKTG

>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 STGLLGKTG 10
S G+LGK+G
Sbjct: 36 SLGILGKSG 44




173|SequenceR|870|861|VTDLLLSTGL

>sp|PGK_METTH|PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 DLLLSTGL 10
DL+L+TGL
Sbjct: 229 DLVLTTGL 236


>sp|GATD_METS5|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Metallosphaera sedula (strain ATCC 51363

Query: 1 VTDLLLSTG 9
+ D+LLS+G
Sbjct: 317 IVDILLSSG 325




174|SequenceR|875|866|DSESEVTDLL

>sp|RF12_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 1 DSESEVTDLL 10
DSE EVTD++
Sbjct: 359 DSELEVTDVI 368


>sp|SYD_PYRAB|ASPARTATE--TRNA(ASP) ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 DSESEVTDLL 10
+SE EV DLL
Sbjct: 238 ESEEEVMDLL 247


>sp|SYFB_KORCO|PHENYLALANINE--TRNA ligase beta subunit|Korarchaeum cryptofilum (strain OPF8)

Query: 2 SESEVTDLL 10
SE E+TDLL
Sbjct: 19 SEEELTDLL 27


>sp|RS11_THEAC|SMALL ribosomal subunit protein uS11|Thermoplasma acidophilum (strain

Query: 3 ESEVTDLL 10
E E+TDL+
Sbjct: 66 EKEITDLI 73


>sp|Y1623_METJA|UNCHARACTERIZED protein MJ1623|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DSESEVTDLL 10
DSE E+ D+L
Sbjct: 141 DSEQEILDVL 150


>sp|GLPA1_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A1|Haloferax volcanii

Query: 1 DSESEVTDLL 10
++ SEVTD+L
Sbjct: 165 ETHSEVTDVL 174




175|SequenceR|880|871|DFYEDDSESE

>sp|AATB_HALVD|A-TYPE ATP synthase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 1 DFYEDDSES 9
D+YEDD+ES
Sbjct: 455 DYYEDDAES 463


>sp|Y2139_METS5|MEMO1 family protein Msed_2139|Metallosphaera sedula (strain ATCC 51363

Query: 2 FYEDDS 7
FYEDDS
Sbjct: 11 FYEDDS 16


>sp|RADB_METJA|DNA repair and recombination protein|Methanocaldococcus jannaschii

Query: 1 DFYEDD 6
DFYE D
Sbjct: 79 DFYEQD 84


>sp|Y1438_METS3|MEMO1 family protein Msm_1438|Methanobrevibacter smithii (strain ATCC

Query: 2 FYEDDSE 8
FY DDSE
Sbjct: 11 FYPDDSE 17




176|SequenceR|885|876|EGDEADFYED

>sp|RL10E_METS5|LARGE ribosomal subunit protein uL16|Metallosphaera sedula (strain ATCC

Query: 2 GDEADFY 8
G+E DFY
Sbjct: 78 GNETDFY 84


>sp|SYS2_METTP|TYPE-2 serine--tRNA ligase|Methanothrix thermoacetophila (strain DSM

Query: 1 EGDEADFYE 9
EGD A+F+E
Sbjct: 19 EGDLAEFFE 27


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 1 EGDEADFY 8
+GD+ DFY
Sbjct: 285 DGDQEDFY 292


>sp|ADEC_METBF|ADENINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EGDEADF 7
EGD ADF
Sbjct: 295 EGDPADF 301


>sp|ADEC_METAC|ADENINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EGDEADF 7
EGD ADF
Sbjct: 295 EGDPADF 301


>sp|IF2P_PYRFU|PROBABLE translation initiation factor IF-2|Pyrococcus furiosus (strain ATCC

Query: 1 EGDEADFY 8
+GDE +FY
Sbjct: 151 KGDEKEFY 158


>sp|CHEF2_HALS3|TAXIS protein CheF2|Halobacterium salinarum (strain ATCC 29341

Query: 2 GDEADFYED 10
GD A F+ED
Sbjct: 61 GDLARFFED 69




177|SequenceR|890|881|KCTQPEGDEA

>sp|IDI2_HALSA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Halobacterium salinarum (strain ATCC 700922

Query: 1 KCTQPEGD 8
+ TQPEGD
Sbjct: 165 EATQPEGD 172


>sp|AMZA_METJA|ARCHAEMETZINCIN jannaschii (strain ATCC 43067

Query: 2 CTQPEGD 8
C QP GD
Sbjct: 8 CIQPVGD 14


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 QPEGDE 9
+PEGDE
Sbjct: 474 KPEGDE 479


>sp|RS7_METB6|SMALL ribosomal subunit protein uS7|Methanoregula boonei (strain DSM

Query: 4 QPEGDEA 10
QPEGD A
Sbjct: 9 QPEGDAA 15


>sp|IDI2_NATPD|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 KCTQPEGD 8
+ QPEGD
Sbjct: 165 EAVQPEGD 172


>sp|RL18_METAR|LARGE ribosomal subunit protein uL18|Methanocella arvoryzae (strain DSM

Query: 3 TQPEGDE 9
T+PEGD+
Sbjct: 51 TRPEGDK 57


>sp|IDI2_METMA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KCTQPEGD 8
+ QPEGD
Sbjct: 161 EAVQPEGD 168


>sp|Y421_METJA|UNCHARACTERIZED protein MJ0421|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TQPEGDE 9
T P+GDE
Sbjct: 268 TDPKGDE 274




178|SequenceR|895|886|SGKMSKCTQP

>sp|RAD50_HALVD|DNA double-strand break repair Rad50|Haloferax volcanii (strain ATCC

Query: 1 SGKMSKCTQP 10
+GK +C QP
Sbjct: 451 AGKCPECGQP 460


>sp|GATD_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina acetivorans (strain ATCC

Query: 1 SGKMSKCTQ 9
SG++++CTQ
Sbjct: 415 SGEITECTQ 423


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 SGKMSKCTQP 10
SGK +KC P
Sbjct: 1073 SGKCNKCGGP 1082




179|SequenceR|900|891|AKKLESGKMS

>sp|Y1282_METJA|UPF0252 protein MJ1282|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KKLESGKMS 10
KK+ESGK S
Sbjct: 210 KKIESGKFS 218


>sp|RPO2C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter

Query: 2 KKLESGKMS 10
+KLE+G+MS
Sbjct: 79 EKLETGEMS 87


>sp|GPMI2_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina acetivorans (strain ATCC

Query: 2 KKLESGKMS 10
K LE+GK+S
Sbjct: 486 KALENGKLS 494


>sp|GPMI_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KKLESGKMS 10
K LE+GK+S
Sbjct: 486 KALENGKLS 494


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KKLESGKM 9
KKLESG++
Sbjct: 233 KKLESGEL 240




180|SequenceR|905|896|NPVEAAKKLE

>sp|HIS4_METJA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanocaldococcus jannaschii

Query: 1 NPVEAAKKL 9
NPVE AKK
Sbjct: 31 NPVEVAKKF 39


>sp|Y1117_AERPE|UPF0173 metal-dependent hydrolase APE_1117|Aeropyrum pernix (strain ATCC

Query: 1 NPVEAAKKLE 10
+PVEAAK +E
Sbjct: 179 DPVEAAKAVE 188


>sp|EF2_PYRHO|ELONGATION factor 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NPVEAAKKL 9
NP E AKKL
Sbjct: 514 NPKEVAKKL 522


>sp|EF2_PYRAB|ELONGATION factor 2|Pyrococcus abyssi (strain GE5 /

Query: 1 NPVEAAKKL 9
NP E AKKL
Sbjct: 514 NPKEVAKKL 522


>sp|EF2_THEGJ|ELONGATION factor 2|Thermococcus gammatolerans (strain DSM 15229

Query: 1 NPVEAAKKL 9
NP E AKKL
Sbjct: 514 NPKEVAKKL 522


>sp|NNR_HYPBU|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Hyperthermus butylicus (strain

Query: 1 NPVEAAKKL 9
NP+EAA ++
Sbjct: 507 NPIEAANRV 515


>sp|THIE_METAC|THIAMINE-PHOSPHATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PVEAAKKL 9
P+E AKKL
Sbjct: 105 PIEIAKKL 112


>sp|SRP54_SACS2|SIGNAL recognition particle 54 kDa|Saccharolobus solfataricus (strain ATCC

Query: 1 NPVEAAKK 8
NP+E AKK
Sbjct: 162 NPIEIAKK 169


>sp|PYRF_ARCFU|OROTIDINE 5'-phosphate decarboxylase|Archaeoglobus fulgidus (strain ATCC

Query: 1 NPVEAAKKL 9
NP E A+KL
Sbjct: 195 NPAEEARKL 203


>sp|PYRF_METBU|OROTIDINE 5'-phosphate decarboxylase|Methanococcoides burtonii (strain DSM

Query: 1 NPVEAAKKL 9
+P EAAKK+
Sbjct: 201 SPAEAAKKI 209


>sp|HIS6_PYRFU|IMIDAZOLE glycerol phosphate synthase subunit|Pyrococcus furiosus (strain

Query: 1 NPVEAAKKLE 10
+P+E AK+ E
Sbjct: 31 DPIELAKRYE 40


>sp|ACD_METJA|ACETATE--COA ligase [ADP-forming]|Methanocaldococcus jannaschii (strain ATCC

Query: 1 NPVEAAKKL 9
NP EA KKL
Sbjct: 551 NPKEAFKKL 559


>sp|Y1782_THEKO|UNCHARACTERIZED serpin-like protein TK1782|Thermococcus kodakarensis (strain ATCC

Query: 1 NPVEAAKKL 9
NP EAA+++
Sbjct: 179 NPAEAAREI 187




181|SequenceR|910|901|NILEENPVEA

>sp|PMDHS_METAR|PHOSPHOMEVALONATE dehydratase small subunit|Methanocella arvoryzae (strain DSM 22066

Query: 3 LEENPVE 9
LE+NPVE
Sbjct: 106 LEQNPVE 112


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 ILEENPVE 9
ILEENP E
Sbjct: 330 ILEENPAE 337


>sp|GGGPS_METJA|GERANYLGERANYLGLYCERYL phosphate synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NILEENP 7
N+LEENP
Sbjct: 226 NLLEENP 232


>sp|SYTE_AERPE|THREONINE--TRNA ligase editing subunit|Aeropyrum pernix (strain ATCC 700893

Query: 3 LEENPVEA 10
LE++PVEA
Sbjct: 228 LEDDPVEA 235


>sp|EF1A_PYRHO|ELONGATION factor 1-alpha|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NILEENP 7
NI+EENP
Sbjct: 368 NIVEENP 374


>sp|EF1A_THEKO|ELONGATION factor 1-alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 NILEENP 7
NI+EENP
Sbjct: 368 NIVEENP 374


>sp|EF1A_THEGJ|ELONGATION factor 1-alpha|Thermococcus gammatolerans (strain DSM 15229

Query: 1 NILEENP 7
NI+EENP
Sbjct: 368 NIVEENP 374


>sp|NIKMN_ARCFU|PUTATIVE fused nickel transport protein|Archaeoglobus fulgidus (strain ATCC

Query: 3 LEENPV 8
LEENP+
Sbjct: 246 LEENPI 251


>sp|TRPD_PICTO|ANTHRANILATE phosphoribosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 NILEENPVEA 10
NI+E++PV++
Sbjct: 252 NIIEKDPVKS 261


>sp|GYRB_ARCFU|DNA gyrase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LEENPVEA 10
LEENP +A
Sbjct: 363 LEENPAQA 370


>sp|EF1A_PYRWO|ELONGATION factor 1-alpha|Pyrococcus woesei

Query: 1 NILEENP 7
NI+EENP
Sbjct: 370 NIVEENP 376


>sp|EF1A_THECE|ELONGATION factor 1-alpha|Thermococcus celer

Query: 1 NILEENP 7
NI+EENP
Sbjct: 368 NIVEENP 374


>sp|EF1A_PYRFU|ELONGATION factor 1-alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NILEENP 7
NI+EENP
Sbjct: 368 NIVEENP 374


>sp|DNAG_METVS|DNA primase DnaG|Methanococcus vannielii (strain ATCC 35089

Query: 1 NILEENPV 8
NI+E NPV
Sbjct: 275 NIVESNPV 282


>sp|EF1A_THESM|ELONGATION factor 1-alpha|Thermococcus sibiricus (strain DSM 12597

Query: 1 NILEENP 7
N++EENP
Sbjct: 368 NVVEENP 374


>sp|EF1A_THEON|ELONGATION factor 1-alpha|Thermococcus onnurineus (strain NA1)

Query: 1 NILEENP 7
N++EENP
Sbjct: 368 NVVEENP 374


>sp|NSR_THEKO|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Thermococcus kodakarensis

Query: 3 LEENPVE 9
LE+NPVE
Sbjct: 143 LEKNPVE 149


>sp|DNAG_NANEQ|DNA primase DnaG|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 NILEENPVE 9
NI++E P+E
Sbjct: 311 NIIDEKPLE 319


>sp|PUR2_THEKO|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 NILEENPV 8
N+LEEN V
Sbjct: 80 NVLEENGV 87




182|SequenceR|915|906|FKLLLNILEE

>sp|GATD_THEKO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermococcus kodakarensis (strain ATCC

Query: 2 KLLLNILEE 10
KLL NI+ E
Sbjct: 141 KLLFNIMSE 149


>sp|AROA_METS3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 2 KLLLNILEE 10
KL+LNIL++
Sbjct: 284 KLILNILKK 292


>sp|PYRB_META3|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus aeolicus

Query: 2 KLLLNILEE 10
K +LNILEE
Sbjct: 13 KEILNILEE 21




183|SequenceR|920|911|VEKIEFKLLL

>sp|PELO_THEAC|PROTEIN pelota homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VEKIEFK 7
VEKIEF+
Sbjct: 67 VEKIEFQ 73


>sp|CAPPA_PYRAB|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 VEKIEFKLLL 10
VEK E KLLL
Sbjct: 91 VEKAEAKLLL 100


>sp|TRPE_METTH|ANTHRANILATE synthase component 1|Methanothermobacter thermautotrophicus

Query: 2 EKIEFK 7
EKIEFK
Sbjct: 15 EKIEFK 20


>sp|CAPPA_PYRHO|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VEKIEFKLLL 10
VEK E KLLL
Sbjct: 91 VEKAEAKLLL 100




184|SequenceR|925|916|TFELIVEKIE

>sp|ARGDC_IGNH4|ARGININE decarboxylase proenzyme|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 FELIVEKIE 10
FELIVE++E
Sbjct: 110 FELIVERLE 118


>sp|SYR_METLZ|ARGININE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 FELIVEKIE 10
F+L++EKIE
Sbjct: 205 FDLLMEKIE 213


>sp|LIPA_PYRAE|LIPOYL synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 TFELIVEKIE 10
TFE +VE +E
Sbjct: 203 TFEEVVETLE 212


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 FELIVEKIE 10
++L+VEK+E
Sbjct: 823 YDLLVEKVE 831


>sp|SYE_METVS|GLUTAMATE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 FELIVEKIE 10
F ++VEKIE
Sbjct: 460 FNIVVEKIE 468


>sp|RL3_STAMF|LARGE ribosomal subunit protein uL3|Staphylothermus marinus (strain

Query: 2 FELIVEKI 9
F+L+VEK+
Sbjct: 38 FDLLVEKL 45


>sp|G1PDH_ARCFU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FELIVEK 8
FEL+VEK
Sbjct: 341 FELVVEK 347


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FELIVEKIE 10
+ELIVEK++
Sbjct: 1234 YELIVEKLK 1242


>sp|SYE_METMP|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 FELIVEKIE 10
F ++VEK+E
Sbjct: 460 FNIVVEKVE 468


>sp|SYE_METM5|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 FELIVEKIE 10
F ++VEK+E
Sbjct: 460 FNIVVEKVE 468


>sp|SYE_METM7|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 FELIVEKIE 10
F +++EKIE
Sbjct: 460 FNIVIEKIE 468




185|SequenceR|930|921|EKQQKTFELI

>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EKQQKTFELI 10
+K+Q+TF LI
Sbjct: 326 DKEQETFNLI 335


>sp|TRM56_METST|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosphaera stadtmanae

Query: 1 EKQQKTFELI 10
E +QK FE+I
Sbjct: 72 EHKQKGFEII 81




186|SequenceR|935|926|LITDEEKQQK

>sp|DNAJ_HALMA|CHAPERONE protein DnaJ|Haloarcula marismortui (strain ATCC 43049

Query: 1 LITDEEKQQ 9
++TDEEK+Q
Sbjct: 54 VLTDEEKRQ 62


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 LITDEEKQQ 9
L+T+EEKQ+
Sbjct: 526 LLTEEEKQE 534




187|SequenceR|940|931|TVNFVLITDE

>sp|DCD_PYRCJ|DCTP deaminase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 NFVLITDE 10
NFVL+T E
Sbjct: 76 NFVLLTTE 83


>sp|TRPA_PYRFU|TRYPTOPHAN synthase alpha chain|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TVNFVLITDE 10
T+NF+L DE
Sbjct: 21 TLNFLLALDE 30


>sp|DCD_PYRNV|DCTP deaminase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 NFVLITDE 10
NFVL+T E
Sbjct: 76 NFVLLTTE 83


>sp|DCD_PYRIL|DCTP deaminase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 NFVLITDE 10
NFVL+T E
Sbjct: 76 NFVLLTTE 83


>sp|DCD_PYRAR|DCTP deaminase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 NFVLITDE 10
NFVL+T E
Sbjct: 76 NFVLLTTE 83


>sp|PCNA2_AERPE|DNA polymerase sliding clamp 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 TVNFVLITDE 10
TV+F ++TD+
Sbjct: 134 TVSFTILTDD 143


>sp|Y1613_METJA|UNCHARACTERIZED protein MJ1613|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TVNFVLITD 9
TVN +LIT+
Sbjct: 158 TVNIILITN 166




188|SequenceR|945|936|ETGLQTVNFV

>sp|OGT_METAC|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ETGLQTVNFV 10
E GL+ VNF+
Sbjct: 19 EEGLKYVNFM 28


>sp|KADA_THEAC|ADENYLATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ETGLQTVNF 9
ETG++ VN+
Sbjct: 23 ETGIKIVNY 31


>sp|MCRY_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ETGLQTVNF 9
ETGL +V+F
Sbjct: 342 ETGLPSVDF 350


>sp|MCRB_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 1 ETGLQTVNF 9
ETGL +V+F
Sbjct: 341 ETGLPSVDF 349




189|SequenceR|950|941|TRMTAETGLQ

>sp|TRPB1_PYRFU|TRYPTOPHAN synthase beta chain 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TRMTAETG 8
TR+ AETG
Sbjct: 99 TRLIAETG 106


>sp|TRPB1_PYRAB|TRYPTOPHAN synthase beta chain 1|Pyrococcus abyssi (strain GE5 /

Query: 1 TRMTAETG 8
TR+ AETG
Sbjct: 99 TRLIAETG 106


>sp|TRPB_META3|TRYPTOPHAN synthase beta chain|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 TRMTAETG 8
TR+ AETG
Sbjct: 101 TRIIAETG 108


>sp|TRPB1_METMA|TRYPTOPHAN synthase beta chain 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TRMTAETG 8
TR+ AETG
Sbjct: 110 TRLIAETG 117


>sp|TRPB1_METAC|TRYPTOPHAN synthase beta chain 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TRMTAETG 8
TR+ AETG
Sbjct: 110 TRLIAETG 117


>sp|TRPB1_METTH|TRYPTOPHAN synthase beta chain 1|Methanothermobacter thermautotrophicus

Query: 1 TRMTAETG 8
TR+ AETG
Sbjct: 102 TRIIAETG 109




190|SequenceR|955|946|VTLDFTRMTA

>sp|RNJ_METJA|RIBONUCLEASE J|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VTLDFTRMT 9
+TL+F R+T
Sbjct: 142 ITLEFIRIT 150


>sp|PYRH_HALSA|URIDYLATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 5 FTRMTA 10
FTRMTA
Sbjct: 159 FTRMTA 164


>sp|PYRH_HALS3|URIDYLATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 5 FTRMTA 10
FTRMTA
Sbjct: 159 FTRMTA 164




191|SequenceR|960|951|KLYSVVTLDF

>sp|FTSZ2_PYRFU|CELL division protein FtsZ 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KLYSVVTLDF 10
KL S+V +DF
Sbjct: 231 KLNSIVNIDF 240


>sp|FAU1_SACS2|PROBABLE ribonuclease FAU-1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KLYSVVTLD 9
KLYSV+ +D
Sbjct: 87 KLYSVIEID 95


>sp|RIO1_METJA|RIO-TYPE serine/threonine-protein kinase Rio1|Methanocaldococcus jannaschii

Query: 1 KLYSVVTLDF 10
K+Y V T DF
Sbjct: 103 KVYRVATCDF 112


>sp|FAU1_SACI6|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KLYSVVTLD 9
KLYSV+ D
Sbjct: 87 KLYSVIEAD 95


>sp|FAU1_SACI4|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KLYSVVTLD 9
KLYSV+ D
Sbjct: 87 KLYSVIEAD 95


>sp|FAU1_SACI3|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.27)

Query: 1 KLYSVVTLD 9
KLYSV+ D
Sbjct: 87 KLYSVIEAD 95


>sp|FAU1_SACI2|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 KLYSVVTLD 9
KLYSV+ D
Sbjct: 87 KLYSVIEAD 95


>sp|FAU1_SACI7|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 KLYSVVTLD 9
KLYSV+ D
Sbjct: 87 KLYSVIEAD 95




192|SequenceR|965|956|DLSIKKLYSV

>sp|NNRE_CENSY|NAD(P)H-HYDRATE epimerase|Cenarchaeum symbiosum (strain A)

Query: 1 DLSIKKLYSV 10
D+S+K++Y++
Sbjct: 2 DISVKQMYNI 11


>sp|METXA_METVS|HOMOSERINE O-acetyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LSIKKLYSV 10
L IKKL+S+
Sbjct: 140 LGIKKLFSI 148


>sp|SYFA_METKA|PHENYLALANINE--TRNA ligase alpha subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 LSIKKLYSV 10
+S++KLY V
Sbjct: 364 VSVRKLYEV 372


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LSIKKLYS 9
LS+KKLY+
Sbjct: 110 LSLKKLYN 117




193|SequenceR|970|961|EIEHYDLSIK

>sp|Y457_METJA|UNCHARACTERIZED metallohydrolase MJ0457|Methanocaldococcus jannaschii (strain ATCC

Query: 2 IEHYDLSIK 10
I+HYD SIK
Sbjct: 309 IKHYDNSIK 317


>sp|LEUC_METAC|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina

Query: 1 EIEHYDLS 8
+I HYD+S
Sbjct: 260 DIRHYDVS 267


>sp|Y966_METJA|UNCHARACTERIZED protein MJ0966|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EIEHYDLSIK 10
E+E +DLS K
Sbjct: 356 EVEEFDLSSK 365


>sp|TAW22_NANEQ|TRNA (guanine(37)-N(1))/4-demethylwyosine(37)-methyltransferase

Query: 1 EIEHYDLSI 9
EI+HYD I
Sbjct: 271 EIKHYDYKI 279


>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 1 EIEHYDLSI 9
E+E YDL++
Sbjct: 2 EVEKYDLTL 10


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 EIEHYDLSIK 10
E+E YD +I+
Sbjct: 414 EVEKYDTTIE 423


>sp|MRE11_METJA|DNA double-strand break repair protein|Methanocaldococcus jannaschii

Query: 1 EIEHYDL 7
E+EH+DL
Sbjct: 170 ELEHFDL 176


>sp|Y367_METJA|PROBABLE integrase/recombinase protein MJ0367|Methanocaldococcus jannaschii

Query: 1 EIEHYD 6
EI+HYD
Sbjct: 134 EIQHYD 139


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 EIEHYD 6
EI+HYD
Sbjct: 297 EIDHYD 302


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 1 EIEHYDLSI 9
EIE YD+ +
Sbjct: 982 EIEKYDIKV 990


>sp|IF2A_ARCFU|TRANSLATION initiation factor 2 subunit|Archaeoglobus fulgidus (strain ATCC

Query: 4 HYDLSIK 10
H DLSIK
Sbjct: 82 HIDLSIK 88


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IEHYDLSI 9
+EH+D+ I
Sbjct: 5 LEHFDIKI 12




194|SequenceR|975|966|KRKSGEIEHY

>sp|RPO2C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter

Query: 1 KRKSGEIEH 9
KR+SGE+ H
Sbjct: 29 KRRSGEVSH 37


>sp|ARLY_METMJ|ARGININOSUCCINATE lyase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 KSGEIEHY 10
+SG++EH+
Sbjct: 15 RSGDLEHF 22


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 KSGEIEH 9
K+GEIEH
Sbjct: 393 KAGEIEH 399


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KSGEIEH 9
K+GEIEH
Sbjct: 393 KAGEIEH 399


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KSGEIEH 9
K+GEIEH
Sbjct: 393 KAGEIEH 399


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 KSGEIEH 9
K+GEIEH
Sbjct: 393 KAGEIEH 399


>sp|TDXH_METM5|PEROXIREDOXIN maripaludis (strain C5 /

Query: 3 KSGEIEHY 10
KSGE+E Y
Sbjct: 199 KSGELEGY 206


>sp|TDXH_METMP|PEROXIREDOXIN maripaludis (strain DSM 14266

Query: 3 KSGEIEHY 10
KSGE+E Y
Sbjct: 199 KSGELEGY 206


>sp|HIS6_IGNH4|IMIDAZOLE glycerol phosphate synthase subunit|Ignicoccus hospitalis (strain

Query: 4 SGEIEHY 10
+GE+EH+
Sbjct: 205 AGELEHF 211




195|SequenceR|980|971|ILHLPKRKSG

>sp|CAPPA_METS5|PHOSPHOENOLPYRUVATE carboxylase|Metallosphaera sedula (strain ATCC 51363

Query: 2 LHLPKRKS 9
LHLP+R++
Sbjct: 349 LHLPRRRA 356


>sp|CAPPA_PICTO|PHOSPHOENOLPYRUVATE carboxylase|Picrophilus torridus (strain ATCC 700027

Query: 2 LHLPKRKS 9
++LPKR+S
Sbjct: 348 MYLPKRRS 355


>sp|CAS4_METJA|CRISPR-ASSOCIATED exonuclease Cas4|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILHLPKRK 8
ILH PK K
Sbjct: 112 ILHYPKLK 119




196|SequenceR|985|976|KDSSSILHLP

>sp|MTRC_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanocaldococcus jannaschii (strain

Query: 1 KDSSSILHLP 10
KD+ ++LH+P
Sbjct: 249 KDACAVLHVP 258


>sp|HIS6_SACS2|IMIDAZOLE glycerol phosphate synthase subunit|Saccharolobus solfataricus

Query: 1 KDSSSILHLP 10
KD++S+L +P
Sbjct: 67 KDTASVLSIP 76


>sp|AGL16_SULAC|ARCHAEAL glycosylation protein 16|Sulfolobus acidocaldarius (strain ATCC

Query: 1 KDSSSILHL 9
+DS S+LH
Sbjct: 72 RDSPSVLHF 80


>sp|HEM1_METTM|GLUTAMYL-TRNA reductase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 KDSSSILHL 9
KD ++LHL
Sbjct: 71 KDEDALLHL 79




197|SequenceR|990|981|LDLGPKDSSS

>sp|SYP_METB6|PROLINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 LDLGPKDSSS 10
L+LGP+D S
Sbjct: 348 LELGPRDLDS 357


>sp|DNLI_METKA|DNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 DLGPKDSSS 10
DLGP+D+ +
Sbjct: 536 DLGPEDADT 544


>sp|SYP_METS3|PROLINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LDLGPKD 7
L+LGP+D
Sbjct: 339 LELGPRD 345


>sp|RNJ_PYRAB|RIBONUCLEASE J|Pyrococcus abyssi (strain GE5 /

Query: 2 DLGPKDS 8
D+GP+D+
Sbjct: 342 DIGPRDT 348


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 DLGPKDS 8
DLGP+D+
Sbjct: 219 DLGPEDN 225


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 2 DLGPKD 7
D+GPKD
Sbjct: 397 DMGPKD 402


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 1 LDLGPK 6
+DLGPK
Sbjct: 992 IDLGPK 997


>sp|RSMA_METBF|PROBABLE ribosomal RNA small subunit|Methanosarcina barkeri (strain Fusaro

Query: 2 DLGPKD 7
+LGPKD
Sbjct: 45 ELGPKD 50




198|SequenceR|995|986|YEVKLLDLGP

>sp|KCY_METLZ|CYTIDYLATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 YEVKLLDLGP 10
YE+ +LD P
Sbjct: 138 YEIDILDFSP 147


>sp|TF2B_PYRAR|TRANSCRIPTION initiation factor IIB|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 KLLDLGP 10
+LLDLGP
Sbjct: 66 QLLDLGP 72


>sp|TF2B_PYRNV|TRANSCRIPTION initiation factor IIB|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 KLLDLGP 10
+LLDLGP
Sbjct: 66 QLLDLGP 72


>sp|TF2B_PYRAE|TRANSCRIPTION initiation factor IIB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 KLLDLGP 10
+LLDLGP
Sbjct: 66 QLLDLGP 72


>sp|TF2B_PYRIL|TRANSCRIPTION initiation factor IIB|Pyrobaculum islandicum (strain DSM 4184

Query: 4 KLLDLGP 10
+LLDLGP
Sbjct: 66 QLLDLGP 72


>sp|NUSA_THECE|PROBABLE transcription termination protein NusA|Thermococcus celer

Query: 3 VKLLDLGP 10
V LLD+GP
Sbjct: 105 VALLDIGP 112


>sp|LYSY_SACS2|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YEVKLLDLG 9
Y KLLDLG
Sbjct: 87 YAPKLLDLG 95


>sp|Y061_SULTO|PUTATIVE esterase STK_00610|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EVKLLDLGP 10
EVK+LD+ P
Sbjct: 18 EVKILDVKP 26


>sp|PGP_ARCFU|PHOSPHOGLYCOLATE phosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YEVKLLDL 8
YEV+LLD
Sbjct: 97 YEVELLDF 104


>sp|TRUA_PYRHO|TRNA pseudouridine synthase A|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VKLLDLGP 10
+++LDLGP
Sbjct: 151 IEVLDLGP 158


>sp|RLME_METM6|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 3 VKLLDLGP 10
VKLLDL P
Sbjct: 217 VKLLDLKP 224


>sp|GCH1L_HALSA|GTP cyclohydrolase 1 type 2|Halobacterium salinarum (strain ATCC 700922

Query: 3 VKLLDLGP 10
V++LD+GP
Sbjct: 162 VQVLDVGP 169


>sp|ATGT_METMA|TRNA-GUANINE(15) transglycosylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VKLLDLGP 10
+KL+DL P
Sbjct: 448 IKLMDLNP 455


>sp|RPO11_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo11|Archaeoglobus fulgidus (strain

Query: 2 EVKLLDLG 9
EVK++D+G
Sbjct: 2 EVKIIDIG 9


>sp|ACD_METJA|ACETATE--COA ligase [ADP-forming]|Methanocaldococcus jannaschii (strain ATCC

Query: 2 EVKLLDLGP 10
E+K LDL P
Sbjct: 677 EIKELDLNP 685


>sp|COAD_THEGJ|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 YEVKLLDL 8
YE++L+DL
Sbjct: 57 YELRLMDL 64




199|SequenceR|1000|991|KDAKIYEVKL

>sp|THIE_THEVO|THIAMINE-PHOSPHATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KDAKIYEVKL 10
KDA IY++K+
Sbjct: 137 KDAGIYDIKI 146


>sp|RF1_PYRFU|PEPTIDE chain release factor subunit|Pyrococcus furiosus (strain ATCC

Query: 1 KDAKIYEVK 9
+DA++YE+K
Sbjct: 7 RDAQLYELK 15


>sp|Y856_METTH|METALLOPROTEASE MTH_856|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KDAKIYEVK 9
KD K+ EVK
Sbjct: 37 KDGKLQEVK 45


>sp|RS27A_METKA|SMALL ribosomal subunit protein eS31|Methanopyrus kandleri (strain AV19

Query: 1 KDAKIYEVK 9
+ AK+YEVK
Sbjct: 5 RRAKLYEVK 13


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KDAKIYEVK 9
KD KI E+K
Sbjct: 292 KDGKIVEIK 300


>sp|RAD50_METMA|DNA double-strand break repair Rad50|Methanosarcina mazei (strain ATCC

Query: 1 KDAKIYEVKL 10
++AK++E KL
Sbjct: 690 REAKVFERKL 699


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 1 KDAKIYEVK 9
KD KI E+K
Sbjct: 292 KDGKIVEIK 300




200|SequenceR|1005|996|FSPGNKDAKI

>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 FSPGNKDAKI 10
F P NKD +I
Sbjct: 259 FMPANKDGEI 268


>sp|DP2S_ARCFU|DNA polymerase II small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 SPGNKDA 8
SPGN DA
Sbjct: 321 SPGNHDA 327


>sp|EF1A_METB6|ELONGATION factor 1-alpha|Methanoregula boonei (strain DSM 21154

Query: 1 FSPGNKDAKI 10
F P NKD +I
Sbjct: 259 FMPANKDGEI 268


>sp|DP2S_METJA|DNA polymerase II small subunit|Methanocaldococcus jannaschii (strain

Query: 2 SPGNKDA 8
SPGN DA
Sbjct: 417 SPGNHDA 423


>sp|Y213_METJA|UNCHARACTERIZED protein MJ0213|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FSPGNKDAKI 10
F+P NK+ K+
Sbjct: 130 FTPKNKEEKV 139


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 3 PGNKDAKI 10
PGNK+ KI
Sbjct: 525 PGNKNEKI 532


>sp|HISX_ARCFU|HISTIDINOL dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SPGNKDAKI 10
+P NKD K+
Sbjct: 145 TPPNKDGKV 153


>sp|NFI_SACI1|ENDONUCLEASE V|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 FSPGNK 6
+SPGNK
Sbjct: 162 YSPGNK 167


>sp|NFI_SACI4|ENDONUCLEASE V|Saccharolobus islandicus (strain M.14.25 /

Query: 1 FSPGNK 6
+SPGNK
Sbjct: 162 YSPGNK 167


>sp|Y714_METJA|UNCHARACTERIZED protein MJ0714|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PGNKDAKI 10
PGN DA++
Sbjct: 37 PGNVDAEL 44


>sp|NFI_SACS2|ENDONUCLEASE V|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FSPGNK 6
+SPGNK
Sbjct: 162 YSPGNK 167


>sp|NFI_SACI7|ENDONUCLEASE V|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 FSPGNK 6
+SPGNK
Sbjct: 162 YSPGNK 167


>sp|NFI_SACI6|ENDONUCLEASE V|Saccharolobus islandicus (strain M.16.4 /

Query: 1 FSPGNK 6
+SPGNK
Sbjct: 162 YSPGNK 167


>sp|NFI_SACI3|ENDONUCLEASE V|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 FSPGNK 6
+SPGNK
Sbjct: 162 YSPGNK 167


>sp|NFI_SACI2|ENDONUCLEASE V|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 FSPGNK 6
+SPGNK
Sbjct: 162 YSPGNK 167


>sp|HISX_PYRFU|HISTIDINOL dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FSPGNK 6
F PGNK
Sbjct: 177 FGPGNK 182


>sp|Y1513_METJA|UNCHARACTERIZED protein MJ1513|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PGNKDAK 9
PGN D+K
Sbjct: 45 PGNNDSK 51


>sp|Y4618_METAC|UPF0313 protein MA_4618|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FSPGNK 6
+SPGNK
Sbjct: 224 YSPGNK 229


>sp|DNAJ_PICTO|CHAPERONE protein DnaJ|Picrophilus torridus (strain ATCC 700027

Query: 2 SPGNKDAK 9
+PGNK+A+
Sbjct: 36 NPGNKEAE 43


>sp|HISX_PICTO|HISTIDINOL dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 1 FSPGNK 6
F PGNK
Sbjct: 177 FGPGNK 182




201|SequenceR|1010|1001|GFATQFSPGN

>sp|PELO_METTP|PROTEIN pelota homolog|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 FATQFSPG 9
F+T+F PG
Sbjct: 319 FSTEFEPG 326


>sp|PELO_METBU|PROTEIN pelota homolog|Methanococcoides burtonii (strain DSM 6242

Query: 2 FATQFSPG 9
F+T+F PG
Sbjct: 323 FSTEFEPG 330


>sp|PELO_METAR|PROTEIN pelota homolog|Methanocella arvoryzae (strain DSM 22066

Query: 2 FATQFSPG 9
F+T+F PG
Sbjct: 330 FSTEFEPG 337


>sp|PYRG_METPE|CTP synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 FATQFSP 8
FATQF P
Sbjct: 492 FATQFHP 498


>sp|PYRG_METHJ|CTP synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 FATQFSP 8
FATQF P
Sbjct: 493 FATQFHP 499


>sp|PYRG_METB6|CTP synthase|Methanoregula boonei (strain DSM 21154

Query: 2 FATQFSP 8
FATQF P
Sbjct: 493 FATQFHP 499


>sp|PYRG_ARCFU|CTP synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FATQFSP 8
FATQF P
Sbjct: 497 FATQFHP 503


>sp|HIS5_METJA|IMIDAZOLE glycerol phosphate synthase subunit|Methanocaldococcus jannaschii

Query: 2 FATQFSP 8
FATQF P
Sbjct: 172 FATQFHP 178


>sp|PELO_METMA|PROTEIN pelota homolog|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FATQFSPG 9
F+T F PG
Sbjct: 324 FSTAFEPG 331


>sp|PELO_METBF|PROTEIN pelota homolog|Methanosarcina barkeri (strain Fusaro /

Query: 2 FATQFSPG 9
F+T F PG
Sbjct: 324 FSTAFEPG 331


>sp|PELO_METAC|PROTEIN pelota homolog|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 FATQFSPG 9
F+T F PG
Sbjct: 324 FSTAFEPG 331


>sp|GLCD1_VULM7|GLUCOSE 1-dehydrogenase 1|Vulcanisaeta moutnovskia (strain 768-28)

Query: 1 GFATQFS 7
GFAT+F+
Sbjct: 121 GFATEFA 127


>sp|Y042_THEAC|UPF0215 protein Ta0042|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GFATQFSPG 9
GF+ F PG
Sbjct: 12 GFSLPFEPG 20


>sp|COBS_PYRAE|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GFATQFSPG 9
GF+ F PG
Sbjct: 135 GFSKSFKPG 143


>sp|AROD_AERPE|3-DEHYDROQUINATE dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GFATQFSPG 9
GFAT F+ G
Sbjct: 166 GFATSFTLG 174




202|SequenceR|1015|1006|TQETKGFATQ

>sp|SFSA_SACI6|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 2 QETKGFATQ 10
+ETKG+ T+
Sbjct: 76 RETKGYKTK 84


>sp|SFSA_SACI4|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 2 QETKGFATQ 10
+ETKG+ T+
Sbjct: 76 RETKGYKTK 84


>sp|SFSA_SACI3|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 2 QETKGFATQ 10
+ETKG+ T+
Sbjct: 76 RETKGYKTK 84


>sp|SFSA_SACI2|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 2 QETKGFATQ 10
+ETKG+ T+
Sbjct: 76 RETKGYKTK 84




203|SequenceR|1020|1011|FAVKVTQETK

***** No hits found ******


204|SequenceR|1025|1016|LNLSSFAVKV

>sp|OGT_METVM|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanocaldococcus vulcanius (strain ATCC

Query: 1 LNLSSFAVKV 10
LN+SSF KV
Sbjct: 75 LNVSSFTKKV 84




205|SequenceR|1030|1021|QTQLLLNLSS

***** No hits found ******


206|SequenceR|1035|1026|SAVLAQTQLL

***** No hits found ******


207|SequenceR|1040|1031|TLYNISAVLA

>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LYNISAVLA 10
LYN+ +VLA
Sbjct: 446 LYNVRSVLA 454




208|SequenceR|1045|1036|SPIITTLYNI

>sp|ARFB_METRM|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanobrevibacter ruminantium (strain

Query: 2 PIITTLYNI 10
PI+TTLY+I
Sbjct: 114 PIVTTLYDI 122


>sp|TRUA_PYRAE|TRNA pseudouridine synthase A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SPIITTLYNI 10
+P +TT+Y+I
Sbjct: 133 TPTVTTVYDI 142


>sp|TRUA_PYRAR|TRNA pseudouridine synthase A|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 SPIITTLYNI 10
+P +TT+Y I
Sbjct: 133 TPTVTTVYKI 142


>sp|Y1562_METJA|PUTATIVE membrane protein MJ1562|Methanocaldococcus jannaschii (strain

Query: 1 SPIITTLYNI 10
+PII TLY +
Sbjct: 56 NPIIKTLYEV 65


>sp|SUCC_HALLT|SUCCINATE--COA ligase [ADP-forming] subunit beta|Halorubrum lacusprofundi (strain

Query: 1 SPIITTLYNI 10
+ I+TTLY++
Sbjct: 170 ASILTTLYDL 179


>sp|CAS1_METTH|CRISPR-ASSOCIATED endonuclease Cas1|Methanothermobacter thermautotrophicus (strain

Query: 1 SPIITTLYN 9
S +IT LYN
Sbjct: 207 STVITELYN 215




209|SequenceR|1050|1041|ISQDDSPIIT

>sp|PCKG_THESM|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus sibiricus (strain DSM 12597

Query: 1 ISQDDSPII 9
++Q+D PII
Sbjct: 316 VNQEDDPII 324


>sp|REP75_PYRAB|REPLICATION initiator protein|Pyrococcus abyssi (strain GE5 /

Query: 1 ISQDDSPII 9
+S DD PI+
Sbjct: 21 LSYDDQPIL 29


>sp|THIE_METMA|THIAMINE-PHOSPHATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ISQDDSPIIT 10
I QDD PI T
Sbjct: 110 IGQDDMPIET 119


>sp|THIE_METBF|THIAMINE-PHOSPHATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ISQDDSPIIT 10
I QDD P+ T
Sbjct: 94 IGQDDMPVET 103




210|SequenceR|1055|1046|EKAVSISQDD

>sp|ARDF_PYRFU|ARCHAEAL ribosome dimerization factor|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EKAVSISQD 9
E A+SISQD
Sbjct: 284 ENAISISQD 292




211|SequenceR|1060|1051|TSIQVEKAVS

***** No hits found ******


212|SequenceR|1065|1056|KQQKETSIQV

***** No hits found ******


213|SequenceR|1070|1061|PLTSNKQQKE

***** No hits found ******


214|SequenceR|1075|1066|SVIAKPLTSN

>sp|AROA_AERPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SVIAKPLTSN 10
SV+ +PL SN
Sbjct: 44 SVVRRPLVSN 53


>sp|Y1403_METJA|UNCHARACTERIZED protein MJ1403|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IAKPLTSN 10
IAKP TSN
Sbjct: 112 IAKPSTSN 119




215|SequenceR|1080|1071|DSDRSSVIAK

>sp|PURA_METJA|ADENYLOSUCCINATE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DSDRSSVIAK 10
D D+ S+IA+
Sbjct: 31 DKDKPSIIAR 40


>sp|KAD_THEON|ADENYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 DSDRSSVIAK 10
+ DRS ++AK
Sbjct: 159 EDDRSEIVAK 168




216|SequenceR|1085|1076|RFDIIDSDRS

>sp|TRM1_METTH|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanothermobacter

Query: 1 RFDIIDSD 8
RFD+ID D
Sbjct: 120 RFDVIDID 127


>sp|MSRB_METBF|PEPTIDE methionine sulfoxide reductase MsrB|Methanosarcina barkeri

Query: 2 FDIIDSDR 9
+D+I SDR
Sbjct: 73 YDVISSDR 80


>sp|ATGT_ARCFU|TRNA-GUANINE(15) transglycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RFDIIDSD 8
RF+I+D D
Sbjct: 3 RFEILDKD 10


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 RFDIID 6
RFDIID
Sbjct: 740 RFDIID 745


>sp|SPEH_META3|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus aeolicus (strain ATCC

Query: 1 RFDIIDSDR 9
+FDIID R
Sbjct: 104 KFDIIDIKR 112


>sp|G3P_THEAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 FDIIDSDRS 10
FDI D DRS
Sbjct: 315 FDIADRDRS 323


>sp|MSRB_METMA|PEPTIDE methionine sulfoxide reductase MsrB|Methanosarcina mazei (strain

Query: 2 FDIIDSDR 9
+D+I SDR
Sbjct: 73 YDVISSDR 80


>sp|KTHY_METBU|PROBABLE thymidylate kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 RFDIIDSDR 9
RF +ID+DR
Sbjct: 174 RFVVIDTDR 182


>sp|MTNA_METST|PUTATIVE methylthioribose-1-phosphate isomerase|Methanosphaera stadtmanae

Query: 2 FDIIDSD 8
FDI++SD
Sbjct: 293 FDIVESD 299




217|SequenceR|1090|1081|LKAFLRFDII

>sp|REG5_PYRHO|UNCHARACTERIZED HTH-type transcriptional regulator PH1055|Pyrococcus horikoshii

Query: 1 LKAFLRFD 8
+ A+LRFD
Sbjct: 54 ISAYLRFD 61




218|SequenceR|1095|1086|VCFANLKAFL

>sp|PTH_METM6|PEPTIDYL-TRNA hydrolase|Methanococcus maripaludis (strain C6 /

Query: 2 CFANLKAFL 10
C A+L+AFL
Sbjct: 24 CHASLQAFL 32


>sp|QUEC_METLZ|7-CYANO-7-DEAZAGUANINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 CFANLKAF 9
C A LKAF
Sbjct: 202 CLARLKAF 209


>sp|PTH_METMP|PEPTIDYL-TRNA hydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 2 CFANLKAFL 10
C A+++AFL
Sbjct: 24 CHASIQAFL 32


>sp|PTH_METM7|PEPTIDYL-TRNA hydrolase|Methanococcus maripaludis (strain C7 /

Query: 2 CFANLKAFL 10
C A+++AFL
Sbjct: 24 CHASIQAFL 32


>sp|PTH_METM5|PEPTIDYL-TRNA hydrolase|Methanococcus maripaludis (strain C5 /

Query: 2 CFANLKAFL 10
C A+++AFL
Sbjct: 24 CHASIQAFL 32




219|SequenceR|1100|1091|ENCVIVCFAN

>sp|SYFB_HALSA|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 700922

Query: 3 CVIVCFA 9
C I+C+A
Sbjct: 253 CAIICYA 259


>sp|SYFB_HALS3|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 29341

Query: 3 CVIVCFA 9
C I+C+A
Sbjct: 253 CAIICYA 259


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 1 ENCVIVC 7
++C+IVC
Sbjct: 239 DSCIIVC 245


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 1 ENCVIVC 7
+ C+IVC
Sbjct: 224 DTCIIVC 230


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 1 ENCVIVC 7
+ CVI+C
Sbjct: 224 DTCVIIC 230


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 1 ENCVIVC 7
+ C+IVC
Sbjct: 224 DTCIIVC 230


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 1 ENCVIVC 7
+ C+IVC
Sbjct: 224 DTCIIVC 230


>sp|CARB1_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 1 ENCVIVC 7
+ C+IVC
Sbjct: 223 DTCIIVC 229


>sp|NADA_METBF|QUINOLINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 NCVIVCFAN 10
N V+VC+ N
Sbjct: 106 NAVVVCYVN 114


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 2 NCVIVC 7
NC+ VC
Sbjct: 227 NCITVC 232


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 2 NCVIVC 7
NC+ VC
Sbjct: 227 NCITVC 232


>sp|CARB1_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 2 NCVIVC 7
NC+ VC
Sbjct: 225 NCITVC 230


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 1 ENCVIVC 7
+ C+I+C
Sbjct: 224 DTCIIIC 230


>sp|HYD2B_PYRFU|SULFHYDROGENASE 2 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NCVIVC 7
NC IVC
Sbjct: 234 NCTIVC 239




220|SequenceR|1105|1096|AINNKENCVI

>sp|PYRB_SACS2|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus solfataricus

Query: 2 INNKENCVI 10
+NN NC++
Sbjct: 91 LNNYSNCIV 99


>sp|PYRB_SACI7|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 2 INNKENCVI 10
+NN NC++
Sbjct: 91 LNNYSNCIV 99


>sp|PYRB_SACI6|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 2 INNKENCVI 10
+NN NC++
Sbjct: 91 LNNYSNCIV 99


>sp|PYRB_SACI4|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 2 INNKENCVI 10
+NN NC++
Sbjct: 91 LNNYSNCIV 99


>sp|PYRB_SACI3|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 2 INNKENCVI 10
+NN NC++
Sbjct: 91 LNNYSNCIV 99


>sp|PYRB_SACI2|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 2 INNKENCVI 10
+NN NC++
Sbjct: 91 LNNYSNCIV 99


>sp|PYRB_SACI1|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 2 INNKENCVI 10
+NN NC++
Sbjct: 91 LNNYSNCIV 99


>sp|TOP6A_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 5 KENCVI 10
KENC+I
Sbjct: 218 KENCLI 223


>sp|THIE_METBF|THIAMINE-PHOSPHATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 NKENC 8
NKENC
Sbjct: 176 NKENC 180


>sp|RNJL_METJA|RNASE J-like protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NKENCVI 10
NKE C+I
Sbjct: 291 NKEPCII 297




221|SequenceR|1110|1101|QIKIEAINNK

>sp|CUTA_SULAC|GLYCERALDEHYDE dehydrogenase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 2 IKIEAINNK 10
+K+EAIN +
Sbjct: 181 VKVEAINER 189


>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QIKIEAINN 9
+IKI+ +NN
Sbjct: 426 EIKIDILNN 434




222|SequenceR|1115|1106|SSDLGQIKIE

>sp|AROD_IGNH4|3-DEHYDROQUINATE dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 SDLGQIK 8
+DLGQ+K
Sbjct: 10 TDLGQVK 16


>sp|NADE_AERPE|NH(3)-DEPENDENT NAD(+) synthetase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SSDLGQIK 8
S DLG+IK
Sbjct: 269 SPDLGEIK 276


>sp|Y182_THEAC|UPF0145 protein Ta0182|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SSDLGQIKIE 10
SSD+GQ+ E
Sbjct: 87 SSDIGQVMTE 96




223|SequenceR|1120|1111|SQLSLSSDLG

>sp|AROB_PYRIL|3-DEHYDROQUINATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 SQLSLSSDLG 10
++L LSS+LG
Sbjct: 253 AELRLSSELG 262


>sp|AROB_PYRNV|3-DEHYDROQUINATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 SQLSLSSDLG 10
++L LSS+LG
Sbjct: 253 AELRLSSELG 262




224|SequenceR|1125|1116|LSQKRSQLSL

***** No hits found ******


225|SequenceR|1130|1121|ELRAFLSQKR

>sp|MFNA_METPE|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosphaerula palustris

Query: 1 ELRAFLSQKR 10
EL +FLS+KR
Sbjct: 10 ELFSFLSKKR 19


>sp|PUR2_METAC|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ELRAFLSQKR 10
ELR LSQK+
Sbjct: 432 ELRGGLSQKQ 441


>sp|LIVF_ARCFU|PROBABLE branched-chain amino acid transport|Archaeoglobus fulgidus (strain

Query: 1 ELRAFLSQK 9
ELRAF+ +K
Sbjct: 122 ELRAFMKRK 130




226|SequenceR|1135|1126|TVIINELRAF

>sp|HPRT_METRM|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanobrevibacter ruminantium (strain

Query: 1 TVIINELRA 9
+V+INEL+A
Sbjct: 132 SVVINELKA 140


>sp|RPO1C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanocaldococcus jannaschii (strain

Query: 2 VIINELRAF 10
+I+N++RAF
Sbjct: 271 LILNKIRAF 279




227|SequenceR|1140|1131|KPDVDTVIIN

>sp|COFD_METPE|2-PHOSPHO-L-LACTATE transferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 PDVDTVI 8
PDVDTVI
Sbjct: 46 PDVDTVI 52


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 KPDVDTVI 8
KPDV+T I
Sbjct: 522 KPDVETAI 529


>sp|LEU3_METJA|3-ISOPROPYLMALATE/3-METHYLMALATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KPDVDTVII 9
+PD+D VI+
Sbjct: 103 RPDIDYVIV 111


>sp|COFD_METVS|2-PHOSPHO-L-LACTATE transferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 PDVDTVI 8
PD+DTVI
Sbjct: 47 PDIDTVI 53


>sp|DNLI_METLZ|DNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 KPDVDTV 7
KP+VDT+
Sbjct: 413 KPEVDTI 419


>sp|COFD_METB6|2-PHOSPHO-L-LACTATE transferase|Methanoregula boonei (strain DSM 21154

Query: 2 PDVDTVI 8
PDVDTV+
Sbjct: 46 PDVDTVM 52


>sp|TRUA_HALMA|TRNA pseudouridine synthase A|Haloarcula marismortui (strain ATCC

Query: 1 KPDVDTV 7
+PDVDTV
Sbjct: 19 QPDVDTV 25


>sp|FAEHP_ARCFU|BIFUNCTIONAL enzyme Fae/Hps|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PDVDTVI 8
PDVDTV+
Sbjct: 146 PDVDTVL 152


>sp|COFD_METJA|2-PHOSPHO-L-LACTATE transferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PDVDTVI 8
PDVDTV+
Sbjct: 49 PDVDTVL 55


>sp|COFD_METKA|2-PHOSPHO-L-LACTATE transferase|Methanopyrus kandleri (strain AV19 /

Query: 2 PDVDTVI 8
PDVDTV+
Sbjct: 47 PDVDTVL 53


>sp|COFD_METHJ|2-PHOSPHO-L-LACTATE transferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PDVDTVI 8
PDVDTV+
Sbjct: 46 PDVDTVM 52


>sp|COFD_METLZ|2-PHOSPHO-L-LACTATE transferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 PDVDTV 7
PD+DTV
Sbjct: 46 PDIDTV 51


>sp|COFD_METM7|2-PHOSPHO-L-LACTATE transferase|Methanococcus maripaludis (strain C7 /

Query: 2 PDVDTVI 8
PD+DTV+
Sbjct: 47 PDIDTVL 53


>sp|DNLI_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 KPDVDTV 7
KPDV+T+
Sbjct: 426 KPDVETL 432


>sp|COFD_METTH|2-PHOSPHO-L-LACTATE transferase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 PDVDTVI 8
PDVDTV+
Sbjct: 51 PDVDTVL 57


>sp|COFD_METM6|2-PHOSPHO-L-LACTATE transferase|Methanococcus maripaludis (strain C6 /

Query: 2 PDVDTVI 8
PD+DTV+
Sbjct: 47 PDIDTVL 53


>sp|COFD_ARCFU|2-PHOSPHO-L-LACTATE transferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PDVDTVI 8
PD+D+VI
Sbjct: 42 PDIDSVI 48


>sp|COFD_METMP|2-PHOSPHO-L-LACTATE transferase|Methanococcus maripaludis (strain DSM 14266

Query: 2 PDVDTVI 8
PD+DTV+
Sbjct: 47 PDIDTVL 53


>sp|COFD_METM5|2-PHOSPHO-L-LACTATE transferase|Methanococcus maripaludis (strain C5 /

Query: 2 PDVDTVI 8
PD+DTV+
Sbjct: 47 PDIDTVL 53


>sp|COFD_METBF|2-PHOSPHO-L-LACTATE transferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PDVDTVI 8
PD+DTVI
Sbjct: 45 PDLDTVI 51


>sp|COFD_NATPD|2-PHOSPHO-L-LACTATE transferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PDVDTVI 8
PDVDTV+
Sbjct: 46 PDVDTVL 52


>sp|FAEHP_METMA|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PDVDTVI 8
PD+DTV+
Sbjct: 145 PDIDTVL 151


>sp|DNLI_METB6|DNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 KPDVDTV 7
KP+VDT+
Sbjct: 413 KPEVDTL 419


>sp|FAEHP_METBU|BIFUNCTIONAL enzyme Fae/Hps|Methanococcoides burtonii (strain DSM 6242

Query: 2 PDVDTVI 8
PD+DTV+
Sbjct: 145 PDIDTVL 151


>sp|G3P_METBU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 2 PDVDTVIIN 10
PDV TVI N
Sbjct: 197 PDVKTVIPN 205


>sp|Y779_METS3|UPF0173 metal-dependent hydrolase Msm_0779|Methanobrevibacter smithii

Query: 2 PDVDTVIIN 10
P++D VI+N
Sbjct: 217 PNIDVVILN 225


>sp|FENR_SACS2|FERREDOXIN--NADP reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 DVDTVIIN 10
DVD+VII+
Sbjct: 234 DVDSVIIS 241


>sp|DNLI_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 1 KPDVDTV 7
KPDV+T+
Sbjct: 452 KPDVETL 458


>sp|COFD_METAC|2-PHOSPHO-L-LACTATE transferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PDVDTVI 8
PD+DTV+
Sbjct: 45 PDLDTVL 51


>sp|DNLI_HALSA|DNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 KPDVDTV 7
KPDV+T+
Sbjct: 429 KPDVETL 435


>sp|DNLI_HALS3|DNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 KPDVDTV 7
KPDV+T+
Sbjct: 429 KPDVETL 435




228|SequenceR|1145|1136|KKHVTKPDVD

>sp|MCRC_METTH|METHYL-COENZYME M reductase I operon|Methanothermobacter thermautotrophicus

Query: 1 KKHVTKP 7
++H+TKP
Sbjct: 45 RRHITKP 51


>sp|MCRC_METTM|METHYL-COENZYME M reductase I operon|Methanothermobacter marburgensis (strain

Query: 1 KKHVTKP 7
++H+TKP
Sbjct: 45 RRHITKP 51


>sp|MCRC_METJA|METHYL-COENZYME M reductase I operon|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KKHVTKP 7
++H+TKP
Sbjct: 47 RRHITKP 53


>sp|MCRC_METVA|METHYL-COENZYME M reductase operon protein|Methanococcus vannielii

Query: 1 KKHVTKP 7
++H+TKP
Sbjct: 47 RRHITKP 53


>sp|THII_METAC|PROBABLE tRNA sulfurtransferase|Methanosarcina acetivorans (strain ATCC

Query: 4 VTKPDVD 10
VTKPD++
Sbjct: 102 VTKPDLE 108


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KKHVTKPDV 9
KK+VT+ DV
Sbjct: 864 KKYVTREDV 872


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 1 KKHVTKPDV 9
KK+VT+ DV
Sbjct: 733 KKYVTREDV 741




229|SequenceR|1150|1141|MISVAKKHVT

>sp|FENR_SACS2|FERREDOXIN--NADP reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ISVAKKHV 9
ISVAKK+V
Sbjct: 305 ISVAKKYV 312


>sp|ARLY_METVS|ARGININOSUCCINATE lyase|Methanococcus vannielii (strain ATCC 35089

Query: 1 MISVAKKH 8
M+S+AK+H
Sbjct: 139 MLSLAKEH 146


>sp|Y1691_METAC|UPF0210 protein MA_1691|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 MISVAKKH 8
MIS+A KH
Sbjct: 1 MISIAFKH 8


>sp|ARLY_METHJ|ARGININOSUCCINATE lyase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 MISVAKKHVT 10
++SVA H+T
Sbjct: 141 LLSVAADHIT 150




230|SequenceR|1155|1146|FVENGMISVA

>sp|SYDND_METBF|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 FVENGMISVA 10
FV+NG I A
Sbjct: 157 FVQNGFIETA 166


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 FVENGMI 7
FVENG I
Sbjct: 12 FVENGWI 18


>sp|RNP1_NITMS|RIBONUCLEASE P protein component 1|Nitrosopumilus maritimus (strain SCM1)

Query: 2 VENGMISVA 10
ENGM S+A
Sbjct: 46 TENGMKSIA 54


>sp|RRP42_THEON|EXOSOME complex component Rrp42|Thermococcus onnurineus (strain NA1)

Query: 3 ENGMIS 8
ENGMIS
Sbjct: 227 ENGMIS 232




231|SequenceR|1160|1151|DLNFRFVENG

>sp|RADB_METM5|DNA repair and recombination protein|Methanococcus maripaludis (strain

Query: 1 DLNFRFVENG 10
+L FR V+NG
Sbjct: 198 NLRFRIVQNG 207


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DLNFRFVE 8
D NFRF++
Sbjct: 580 DYNFRFLQ 587


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 DLNFRFVE 8
D NFRF++
Sbjct: 580 DYNFRFLQ 587


>sp|Y243_ARCFU|UNCHARACTERIZED protein AF_0243|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DLNFRFVE 8
+LN+RF+E
Sbjct: 351 ELNYRFLE 358


>sp|MPTA_ARCFU|GTP cyclohydrolase MptA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 NFRFVENG 10
N RFVE+G
Sbjct: 246 NTRFVEDG 253


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 5 RFVENG 10
RF+ENG
Sbjct: 532 RFIENG 537


>sp|MCRY_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 DLNFRFVENG 10
D N R + NG
Sbjct: 100 DTNIRLINNG 109


>sp|Y052_ARCFU|UNCHARACTERIZED protein AF_0052|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DLNFRFVEN 9
DLNF+ +EN
Sbjct: 17 DLNFQILEN 25


>sp|MCRY_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 DLNFRFVENG 10
D N R + NG
Sbjct: 100 DTNIRLINNG 109


>sp|RS8_METVS|SMALL ribosomal subunit protein uS8|Methanococcus vannielii (strain

Query: 3 NFRFVENG 10
NF ++E+G
Sbjct: 49 NFEYIEDG 56


>sp|RS8_METVA|SMALL ribosomal subunit protein uS8|Methanococcus vannielii

Query: 3 NFRFVENG 10
NF ++E+G
Sbjct: 49 NFEYIEDG 56


>sp|Y1194_METTH|PROBABLE deacetylase MTH_1194|Methanothermobacter thermautotrophicus

Query: 1 DLNFRFVENG 10
DL+ RFVE G
Sbjct: 35 DLSPRFVEPG 44


>sp|RS8_META3|SMALL ribosomal subunit protein uS8|Methanococcus aeolicus (strain ATCC

Query: 3 NFRFVENG 10
NF ++E+G
Sbjct: 49 NFEYIEDG 56


>sp|RS8_METAR|SMALL ribosomal subunit protein uS8|Methanocella arvoryzae (strain DSM

Query: 4 FRFVENG 10
F FV+NG
Sbjct: 50 FEFVDNG 56


>sp|ARCH_AERPE|PROTEIN archease|Aeropyrum pernix (strain ATCC 700893

Query: 1 DLNFRFVEN 9
+L +RF+EN
Sbjct: 62 NLLYRFIEN 70


>sp|RS8_METTL|SMALL ribosomal subunit protein uS8|Methanothermococcus

Query: 3 NFRFVENG 10
NF ++E+G
Sbjct: 49 NFEYIEDG 56


>sp|RADB_METM7|DNA repair and recombination protein|Methanococcus maripaludis (strain

Query: 1 DLNFRFVENG 10
+L FR ++NG
Sbjct: 198 NLRFRILQNG 207


>sp|RS8_METVO|SMALL ribosomal subunit protein uS8|Methanococcus voltae

Query: 3 NFRFVENG 10
NF ++E+G
Sbjct: 49 NFEYIEDG 56


>sp|RS8_METM6|SMALL ribosomal subunit protein uS8|Methanococcus maripaludis (strain

Query: 3 NFRFVENG 10
NF ++E+G
Sbjct: 49 NFEYIEDG 56


>sp|RS8_METMP|SMALL ribosomal subunit protein uS8|Methanococcus maripaludis (strain

Query: 3 NFRFVENG 10
NF ++E+G
Sbjct: 49 NFEYIEDG 56


>sp|RS8_METM5|SMALL ribosomal subunit protein uS8|Methanococcus maripaludis (strain

Query: 3 NFRFVENG 10
NF ++E+G
Sbjct: 49 NFEYIEDG 56


>sp|Y468_SULAC|PUTATIVE antitoxin Saci_0468|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 FRFVENG 10
FR VENG
Sbjct: 74 FRAVENG 80


>sp|RS8_METM7|SMALL ribosomal subunit protein uS8|Methanococcus maripaludis (strain

Query: 3 NFRFVENG 10
NF ++E+G
Sbjct: 49 NFEYIEDG 56


>sp|APGM_THEKO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermococcus kodakarensis (strain ATCC

Query: 2 LNFRFVENG 10
+NF +ENG
Sbjct: 99 VNFATIENG 107


>sp|RS8_HALSA|SMALL ribosomal subunit protein uS8|Halobacterium salinarum (strain

Query: 4 FRFVENG 10
F FV+NG
Sbjct: 50 FEFVDNG 56


>sp|RS8_HALS3|SMALL ribosomal subunit protein uS8|Halobacterium salinarum (strain

Query: 4 FRFVENG 10
F FV+NG
Sbjct: 50 FEFVDNG 56


>sp|APGM_THEGJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermococcus gammatolerans (strain DSM

Query: 2 LNFRFVENG 10
+NF +ENG
Sbjct: 99 VNFATIENG 107




232|SequenceR|1165|1156|ADPYLDLNFR

>sp|COBQ_ARCFU|PROBABLE cobyric acid synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PYLDLNF 9
PYLD NF
Sbjct: 225 PYLDYNF 231


>sp|RKD4_PYRCJ|ARCADIN-4 calidifontis (strain DSM 21063

Query: 3 PYLDLNFR 10
PY+D+N R
Sbjct: 733 PYVDVNVR 740


>sp|Y276_ARCFU|UPF0284 protein AF_0276|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PYLDLN 8
PY+DLN
Sbjct: 108 PYIDLN 113


>sp|NIFE_METTM|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 3 PYLDLNF 9
PY+++NF
Sbjct: 288 PYINVNF 294


>sp|HEM1_METLZ|GLUTAMYL-TRNA reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 ADPYLD 6
ADPYL+
Sbjct: 366 ADPYLE 371


>sp|HJC_METTH|CROSSOVER junction endodeoxyribonuclease Hjc|Methanothermobacter

Query: 1 ADPYLDLNFR 10
A PY+ + FR
Sbjct: 80 ARPYIGIKFR 89


>sp|KHSE_THEGJ|HOMOSERINE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 ADPYLDLNFR 10
+PY +L+FR
Sbjct: 24 GEPYDELSFR 33


>sp|HELS_PYRFU|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DPYLDLNF 9
DPYL+ F
Sbjct: 560 DPYLERKF 567


>sp|ATGT_NANEQ|TRNA-GUANINE(15) transglycosylase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 ADPYLDLNFR 10
D YLDL ++
Sbjct: 161 GDKYLDLRYK 170




233|SequenceR|1170|1161|LDGETADPYL

>sp|GRPE_THEVO|PROTEIN GrpE|Thermoplasma volcanium (strain ATCC 51530

Query: 2 DGETADPYL 10
+GE DPYL
Sbjct: 128 EGEKFDPYL 136


>sp|MTD_METMJ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanoculleus

Query: 1 LDGETADPY 9
+DGE ++PY
Sbjct: 187 VDGEFSNPY 195


>sp|MTD_METPE|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosphaerula

Query: 1 LDGETADPY 9
+DGE ++PY
Sbjct: 187 VDGEFSNPY 195


>sp|THIC1_METST|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LDGETADPY 9
+DGETA Y
Sbjct: 388 IDGETARKY 396


>sp|TOP6B_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 1 LDGETADP 8
+DG+T DP
Sbjct: 547 VDGKTEDP 554


>sp|Y2121_METS5|PROTEIN Msed_2121|Metallosphaera sedula (strain ATCC 51363

Query: 4 ETADPYL 10
ET++PYL
Sbjct: 217 ETSEPYL 223


>sp|Y274_METJA|UNCHARACTERIZED protein MJ0274|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GETADPYL 10
GET PYL
Sbjct: 378 GETGLPYL 385


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 1 LDGETADPY 9
LDG DPY
Sbjct: 229 LDGVDTDPY 237


>sp|GATD_PYRFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LDGETADPY 9
+ GET+D Y
Sbjct: 237 MHGETSDTY 245


>sp|GRPE_METTH|PROTEIN GrpE|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 DGETADPYL 10
+GE DP+L
Sbjct: 123 EGEKFDPFL 131


>sp|GATD_THEKO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermococcus kodakarensis (strain ATCC

Query: 1 LDGETADPY 9
+ GET+D Y
Sbjct: 239 MHGETSDTY 247




234|SequenceR|1175|1166|SMDTYLDGET

>sp|Y3242_HALS3|UPF0284 protein OE_3242F|Halobacterium salinarum (strain ATCC 29341

Query: 1 SMDTYLDGE 9
+M YLDGE
Sbjct: 290 AMAAYLDGE 298


>sp|Y1572_HALSA|UPF0284 protein VNG_1572C|Halobacterium salinarum (strain ATCC 700922

Query: 1 SMDTYLDGE 9
+M YLDGE
Sbjct: 290 AMAAYLDGE 298


>sp|DNLI_METB6|DNA ligase|Methanoregula boonei (strain DSM 21154

Query: 5 YLDGET 10
YLDGET
Sbjct: 338 YLDGET 343


>sp|MDH_NITMS|MALATE dehydrogenase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 TYLDGE 9
TYLDGE
Sbjct: 248 TYLDGE 253


>sp|DNLI_METMJ|DNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 YLDGET 10
YLDGET
Sbjct: 338 YLDGET 343


>sp|HMAT_HALSA|HEME-BASED aerotactic transducer HemAT|Halobacterium salinarum (strain ATCC

Query: 1 SMDTYLD 7
+MDTY+D
Sbjct: 185 AMDTYID 191


>sp|DIPPS_ARCFU|BIFUNCTIONAL IPC transferase and DIPP|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 TYLDGE 9
TY+DGE
Sbjct: 263 TYVDGE 268


>sp|RFCL_METJA|REPLICATION factor C large subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 MDTYLDGET 10
+++YL GET
Sbjct: 30 IESYLKGET 38


>sp|MDH_METKA|MALATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 SMDTYLDGE 9
++ YLDGE
Sbjct: 252 TVSAYLDGE 260


>sp|MDH_METST|MALATE dehydrogenase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 SMDTYLDGET 10
++ TYL+GE
Sbjct: 252 TVSTYLEGEV 261


>sp|NADK_PYRHO|NAD kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 TYLDGE 9
TY+DGE
Sbjct: 124 TYIDGE 129




235|SequenceR|1180|1171|VGDVKSMDTY

>sp|EF1A_THEPD|ELONGATION factor 1-alpha|Thermofilum pendens (strain DSM 2475

Query: 1 VGDVKSMDTY 10
VG+VKS++T+
Sbjct: 273 VGEVKSIETH 282


>sp|Y858_METMJ|UPF0212 protein Memar_0858|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VGDVKSMD 8
+ DVKSMD
Sbjct: 14 IKDVKSMD 21


>sp|RL10_METBU|LARGE ribosomal subunit protein uL10|Methanococcoides burtonii (strain

Query: 3 DVKSMDTY 10
DVK MD Y
Sbjct: 75 DVKKMDDY 82


>sp|FAEHP_METJA|BIFUNCTIONAL enzyme Fae/Hps|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGDVKSMDT 9
V D+K++DT
Sbjct: 218 VADLKTLDT 226


>sp|Y1873_ARCFU|UNCHARACTERIZED protein AF_1873|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VGDVKSMDTY 10
+G VKS TY
Sbjct: 79 IGGVKSRKTY 88


>sp|FAEHP_METAC|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VGDVKSMDT 9
V D+K++DT
Sbjct: 230 VADLKTLDT 238


>sp|FAEHP_METMA|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VGDVKSMDT 9
V D+K++DT
Sbjct: 230 VADLKTLDT 238


>sp|FAEHP_METAR|BIFUNCTIONAL enzyme Fae/Hps|Methanocella arvoryzae (strain DSM 22066

Query: 1 VGDVKSMDT 9
V D+K++DT
Sbjct: 230 VADLKTLDT 238


>sp|FAEHP_METBF|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina barkeri (strain Fusaro /

Query: 1 VGDVKSMDT 9
V D+K++DT
Sbjct: 230 VADLKTLDT 238


>sp|Y1681_METJA|UNCHARACTERIZED protein MJ1681|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GDVKSMDTY 10
D+K MD Y
Sbjct: 215 ADMKDMDAY 223


>sp|FAEHP_METMJ|BIFUNCTIONAL enzyme Fae/Hps|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VGDVKSMDT 9
V D+K++DT
Sbjct: 230 VADLKTLDT 238




236|SequenceR|1185|1176|VNLSLVGDVK

>sp|DPO4_NITMS|DNA polymerase IV|Nitrosopumilus maritimus (strain SCM1)

Query: 1 VNLSLVGDVK 10
+NL +GDVK
Sbjct: 204 MNLETIGDVK 213


>sp|PYRB_METAR|ASPARTATE carbamoyltransferase catalytic subunit|Methanocella arvoryzae

Query: 1 VNLSLVGDVK 10
+N+++VGD+K
Sbjct: 155 LNVAIVGDLK 164


>sp|SYK_ARCFU|LYSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VNLSLVGDV 9
V LSLVG+V
Sbjct: 332 VELSLVGEV 340


>sp|Y817_ARCFU|UNCHARACTERIZED protein AF_0817|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NLSLVGDVK 10
NLS+ G++K
Sbjct: 150 NLSITGEIK 158


>sp|PYRB_METPE|ASPARTATE carbamoyltransferase catalytic subunit|Methanosphaerula palustris

Query: 1 VNLSLVGDVK 10
+N+ L+GD++
Sbjct: 148 INIGLLGDLR 157


>sp|PYRB_METTP|ASPARTATE carbamoyltransferase catalytic subunit|Methanothrix

Query: 1 VNLSLVGDVK 10
++++LVGD+K
Sbjct: 153 LSIALVGDLK 162


>sp|PYRB_CENSY|ASPARTATE carbamoyltransferase catalytic subunit|Cenarchaeum symbiosum

Query: 1 VNLSLVGDVK 10
+N+ +VGD+K
Sbjct: 156 LNIGVVGDLK 165


>sp|FTTA_METJA|TRANSCRIPTION termination factor FttA|Methanocaldococcus jannaschii (strain ATCC

Query: 2 NLSLVGDVK 10
NL+ GD+K
Sbjct: 344 NLAYTGDIK 352


>sp|RPIA_KORCO|RIBOSE-5-PHOSPHATE isomerase A|Korarchaeum cryptofilum (strain OPF8)

Query: 3 LSLVGDVK 10
L L+GDVK
Sbjct: 14 LKLIGDVK 21




237|SequenceR|1190|1181|IQICGVNLSL

>sp|SFSA_AERPE|SUGAR fermentation stimulation protein homolog|Aeropyrum pernix (strain

Query: 1 IQICGVNLSL 10
+++ GVNLSL
Sbjct: 128 VEVKGVNLSL 137


>sp|RLME_METLZ|RIBOSOMAL RNA large subunit methyltransferase|Methanocorpusculum labreanum

Query: 2 QICGVNLS 9
Q+CGV+L+
Sbjct: 64 QLCGVDLN 71


>sp|GCH1_PYRNV|GTP cyclohydrolase 1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 IQICGVNL 8
+++CGV++
Sbjct: 144 VEVCGVHM 151




238|SequenceR|1195|1186|KHLYVIQICG

>sp|Y3513_METJA|MCM-LIKE protein MJECL13|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KHLYVIQICG 10
KHLY+ CG
Sbjct: 134 KHLYICPKCG 143


>sp|AHBA_METBF|SIROHEME decarboxylase alpha subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 KHLYVIQI 8
KHL+ IQ+
Sbjct: 170 KHLFKIQV 177




239|SequenceR|1200|1191|LSMLFKHLYV

>sp|UPPS_SULAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (GGDP specific)|Sulfolobus acidocaldarius (strain ATCC

Query: 1 LSMLFKHLYV 10
LSM+FK+L +
Sbjct: 97 LSMIFKYLKI 106


>sp|CDC61_SACS2|ORC1-TYPE DNA replication protein 1|Saccharolobus solfataricus (strain ATCC

Query: 5 FKHLYV 10
FKH+Y+
Sbjct: 88 FKHVYI 93




240|SequenceR|1205|1196|NLFNLLSMLF

>sp|METK_THEON|S-ADENOSYLMETHIONINE synthase|Thermococcus onnurineus (strain NA1)

Query: 2 LFNLLSML 9
++NLLSML
Sbjct: 320 IYNLLSML 327


>sp|METK_THEGJ|S-ADENOSYLMETHIONINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 LFNLLSML 9
++NLLSML
Sbjct: 320 IYNLLSML 327


>sp|METK_THEKO|S-ADENOSYLMETHIONINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LFNLLSML 9
++N+LSML
Sbjct: 320 IYNILSML 327


>sp|DAPA_METST|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 LFNLLSMLF 10
LFNL+ +LF
Sbjct: 242 LFNLMDVLF 250




241|SequenceR|1210|1201|ATQFNNLFNL

>sp|KHSE_SACS2|HOMOSERINE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 FNNLFNL 10
FNNLFNL
Sbjct: 107 FNNLFNL 113


>sp|DNAJ_HALMT|CHAPERONE protein DnaJ|Haloferax mediterranei (strain ATCC 33500

Query: 4 FNNLFN 9
FNNLFN
Sbjct: 112 FNNLFN 117


>sp|PRNK_METJA|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase MJ1315|Methanocaldococcus jannaschii (strain

Query: 2 TQFNNLFNL 10
T FNNL+ +
Sbjct: 88 TNFNNLYEI 96


>sp|RL10_SULAC|LARGE ribosomal subunit protein uL10|Sulfolobus acidocaldarius (strain

Query: 5 NNLFNL 10
NNLFN+
Sbjct: 64 NNLFNI 69


>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QFNNLFN 9
+FNN++N
Sbjct: 133 RFNNIYN 139


>sp|DPOL3_SACS2|DNA polymerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 TQFNNLFNL 10
T+ N+L+NL
Sbjct: 560 TKINSLYNL 568




242|SequenceR|1215|1206|SLSEKATQFN

***** No hits found ******


243|SequenceR|1220|1211|QATAASLSEK

***** No hits found ******


244|SequenceR|1225|1216|AREAAQATAA

***** No hits found ******


245|SequenceR|1230|1221|KVSTAAREAA

>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis

Query: 1 KVSTAAREAA 10
K+ AAREAA
Sbjct: 88 KIIQAAREAA 97




246|SequenceR|1235|1226|RQALDKVSTA

>sp|Y2143_SULTO|UPF0284 protein STK_21430|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 ALDKVSTA 10
ALDKVS+A
Sbjct: 173 ALDKVSSA 180


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RQALDKVST 9
RQA+DK+S+
Sbjct: 144 RQAIDKLSS 152


>sp|HIS4_METAR|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanocella arvoryzae (strain

Query: 1 RQALDKVS 8
R+A+DKVS
Sbjct: 233 REAIDKVS 240


>sp|RNP2_ARCFU|RIBONUCLEASE P protein component 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RQALDKVSTA 10
R+ALDKV A
Sbjct: 67 REALDKVMVA 76


>sp|Y030_SACI6|UPF0284 protein M164_0030|Saccharolobus islandicus (strain M.16.4 /

Query: 3 ALDKVSTA 10
A+DKVS+A
Sbjct: 172 AMDKVSSA 179


>sp|Y030_SACI4|UPF0284 protein M1425_0030|Saccharolobus islandicus (strain M.14.25 /

Query: 3 ALDKVSTA 10
A+DKVS+A
Sbjct: 172 AMDKVSSA 179


>sp|Y030_SACI3|UPF0284 protein M1627_0030|Saccharolobus islandicus (strain M.16.27)

Query: 3 ALDKVSTA 10
A+DKVS+A
Sbjct: 172 AMDKVSSA 179


>sp|Y030_SACI7|UPF0284 protein YG5714_0030|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 ALDKVSTA 10
A+DKVS+A
Sbjct: 172 AMDKVSSA 179


>sp|Y030_SACI2|UPF0284 protein LS215_0030|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 ALDKVSTA 10
A+DKVS+A
Sbjct: 172 AMDKVSSA 179


>sp|Y030_SACI1|UPF0284 protein YN1551_0030|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 ALDKVSTA 10
A+DKVS+A
Sbjct: 172 AMDKVSSA 179




247|SequenceR|1240|1231|SVRFSRQALD

***** No hits found ******


248|SequenceR|1245|1236|LDINISVRFS

>sp|AATB_HALWD|A-TYPE ATP synthase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LDINISVRFS 10
+D N SVRFS
Sbjct: 62 IDTNASVRFS 71


>sp|GATE_METHJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanospirillum hungatei JF-1 (strain

Query: 2 DINISVR 8
DINIS+R
Sbjct: 219 DINISIR 225


>sp|GATE_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C6 /

Query: 2 DINISVR 8
D+NIS+R
Sbjct: 226 DVNISIR 232


>sp|GATE_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C5 /

Query: 2 DINISVR 8
D+NIS+R
Sbjct: 226 DVNISIR 232


>sp|GATE_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Archaeoglobus fulgidus (strain ATCC

Query: 2 DINISVR 8
D+NIS+R
Sbjct: 225 DVNISIR 231


>sp|GATB_META3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus aeolicus (strain ATCC

Query: 2 DINISVRFS 10
D+NISV ++
Sbjct: 183 DVNISVNYN 191


>sp|GATE_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanothermobacter thermautotrophicus

Query: 2 DINISVR 8
D+NIS+R
Sbjct: 223 DLNISIR 229




249|SequenceR|1250|1241|IVPAKLDINI

>sp|Y536_METPE|DNA-BINDING protein Mpal_0536|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 IVPAKLDINI 10
++PAK D NI
Sbjct: 97 LIPAKKDFNI 106


>sp|RFRNP_HALVD|RNA-FREE ribonuclease P|Haloferax volcanii (strain ATCC 29605

Query: 1 IVPAKLDINI 10
I A+LD+NI
Sbjct: 40 IAAARLDLNI 49


>sp|RNH2_METS3|RIBONUCLEASE HII|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 IVPAKLDI 8
IVP K+DI
Sbjct: 24 IVPEKMDI 31


>sp|MPTA_METST|GTP cyclohydrolase MptA|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 VPAKLDINI 10
VP K D+N+
Sbjct: 211 VPEKQDVNV 219


>sp|Y943_METJA|UNCHARACTERIZED protein MJ0943|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PAKLDINI 10
P K+DINI
Sbjct: 30 PEKIDINI 37


>sp|TRPF_SACS2|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IVPAKLDINI 10
I P K DIN+
Sbjct: 179 IYPGKKDINM 188


>sp|ACDD2_METAC|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 1 IVPAKLDI 8
++PAK D+
Sbjct: 94 LIPAKFDV 101


>sp|ACDD1_METAC|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 1 IVPAKLDI 8
++PAK D+
Sbjct: 94 LIPAKFDV 101




250|SequenceR|1255|1246|SQPIVIVPAK

>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PIVIVPAK 10
PI+IVP+K
Sbjct: 65 PILIVPSK 72


>sp|COABC_METJA|COENZYME A biosynthesis bifunctional protein|Methanocaldococcus jannaschii

Query: 1 SQPIVIVPA 9
++PI IVPA
Sbjct: 129 NKPIFIVPA 137


>sp|COFC_METBU|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 SQPIVIVPAK 10
S+ +VIVP K
Sbjct: 110 SEDVVIVPGK 119


>sp|THS_METTL|CHAPERONIN subunit|Methanothermococcus thermolithotrophicus

Query: 1 SQPIVIVP 8
+QP+V++P
Sbjct: 4 NQPVVVLP 11


>sp|THSB_THEK8|CHAPERONIN subunit beta|Thermococcus sp. (strain KS-8)

Query: 2 QPIVIVP 8
QP+VI+P
Sbjct: 7 QPVVILP 13


>sp|THSB_THEK1|CHAPERONIN subunit beta|Thermococcus sp. (strain JCM 11816

Query: 2 QPIVIVP 8
QP+VI+P
Sbjct: 7 QPVVILP 13


>sp|THSA_THEK8|CHAPERONIN subunit alpha|Thermococcus sp. (strain KS-8)

Query: 2 QPIVIVP 8
QP+VI+P
Sbjct: 7 QPVVILP 13


>sp|THSB_THEKO|CHAPERONIN subunit beta|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 QPIVIVP 8
QP+VI+P
Sbjct: 7 QPVVILP 13


>sp|THSA_THEKO|CHAPERONIN subunit alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 QPIVIVP 8
QP+VI+P
Sbjct: 7 QPVVILP 13


>sp|THSA_THEK1|CHAPERONIN subunit alpha|Thermococcus sp. (strain JCM 11816

Query: 2 QPIVIVP 8
QP+VI+P
Sbjct: 7 QPVVILP 13




251|SequenceR|1260|1251|NTSISSQPIV

***** No hits found ******


252|SequenceR|1265|1256|DVVVANTSIS

>sp|LEUC1_METKA|3-ISOPROPYLMALATE dehydratase large subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 1 DVVVANTSIS 10
D+VVAN ++
Sbjct: 22 DIVVANIDVA 31




253|SequenceR|1270|1261|RILGLDVVVA

>sp|OTC_METM5|ORNITHINE carbamoyltransferase|Methanococcus maripaludis (strain C5 /

Query: 2 ILGLDVVVA 10
ILG+DVV+A
Sbjct: 167 ILGMDVVIA 175


>sp|OTC_METMP|ORNITHINE carbamoyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 2 ILGLDVVVA 10
ILG+DVV+A
Sbjct: 167 ILGMDVVIA 175


>sp|OTC_METM7|ORNITHINE carbamoyltransferase|Methanococcus maripaludis (strain C7 /

Query: 2 ILGLDVVVA 10
ILG+DVV+A
Sbjct: 167 ILGMDVVIA 175


>sp|TPIS_PYRAR|TRIOSEPHOSPHATE isomerase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 RILGLDVVV 9
R LGLDVVV
Sbjct: 111 RELGLDVVV 119


>sp|PFP_THETK|PYROPHOSPHATE--FRUCTOSE 6-phosphate 1-phosphotransferase|Thermoproteus tenax (strain ATCC

Query: 3 LGLDVVVA 10
LGLDVVVA
Sbjct: 90 LGLDVVVA 97


>sp|OTC_META3|ORNITHINE carbamoyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 ILGLDVVVA 10
I+G+D+ VA
Sbjct: 167 IMGMDIFVA 175


>sp|TPIS_THETK|TRIOSEPHOSPHATE isomerase|Thermoproteus tenax (strain ATCC 35583

Query: 1 RILGLDVVV 9
+ LGLDVVV
Sbjct: 111 KSLGLDVVV 119


>sp|TPIS_PYRCJ|TRIOSEPHOSPHATE isomerase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 RILGLDVVV 9
+ +GLDVVV
Sbjct: 111 KAMGLDVVV 119


>sp|RRP4_METKA|EXOSOME complex component Rrp4|Methanopyrus kandleri (strain AV19 /

Query: 1 RILGLDVVVA 10
R+LG D+VV
Sbjct: 179 RVLGCDIVVG 188


>sp|OTC_PYRHO|ORNITHINE carbamoyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LGLDVVVA 10
LG DVVVA
Sbjct: 178 LGADVVVA 185


>sp|OTC_PYRAB|ORNITHINE carbamoyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 LGLDVVVA 10
LG DVVVA
Sbjct: 178 LGADVVVA 185


>sp|OTCA_PYRFU|ORNITHINE carbamoyltransferase, anabolic|Pyrococcus furiosus (strain ATCC

Query: 3 LGLDVVVA 10
LG DVVVA
Sbjct: 178 LGADVVVA 185


>sp|MTRC_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanosarcina barkeri (strain Fusaro

Query: 2 ILGLDVVVA 10
ILGL VV+A
Sbjct: 143 ILGLSVVIA 151


>sp|MTRC_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanosarcina mazei (strain ATCC

Query: 2 ILGLDVVVA 10
ILGL VV+A
Sbjct: 143 ILGLSVVIA 151




254|SequenceR|1275|1266|FQNHVRILGL

>sp|TRM1_METLZ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocorpusculum labreanum

Query: 1 FQNHVRILG 9
F++HVR+LG
Sbjct: 211 FRSHVRVLG 219


>sp|PELO_THEVO|PROTEIN pelota homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FQNHVRILG 9
F+N +RILG
Sbjct: 75 FENRLRILG 83


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FQNHVRILG 9
F NHVRI+
Sbjct: 241 FGNHVRIMA 249


>sp|SOR_ACIAM|SULFUR oxygenase/reductase|Acidianus ambivalens (Desulfurolobus

Query: 1 FQNHVRI 7
FQNH++I
Sbjct: 43 FQNHIQI 49


>sp|ADEC_META3|ADENINE deaminase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 QNHVRILGL 10
QN+ RILGL
Sbjct: 171 QNNYRILGL 179


>sp|PELO_THEAC|PROTEIN pelota homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FQNHVRILG 9
F N +RILG
Sbjct: 75 FDNRLRILG 83


>sp|Y3521_METJA|UNCHARACTERIZED protein MJECL21|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FQNHVRILGL 10
++N++R+LGL
Sbjct: 156 YENNLRMLGL 165


>sp|TRUA_METAC|TRNA pseudouridine synthase A|Methanosarcina acetivorans (strain ATCC

Query: 2 QNHVRIL 8
QNH RIL
Sbjct: 247 QNHKRIL 253


>sp|TYW3_SACS2|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 FQNHVRI 7
F+NH+RI
Sbjct: 70 FKNHLRI 76


>sp|ACDA2_METKA|PUTATIVE acetyl-CoA decarbonylase/synthase complex subunit|Methanopyrus

Query: 2 QNHVRILG 9
++HVR++G
Sbjct: 233 EDHVRVVG 240


>sp|PUR7_THEKO|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 QNHVRILGL 10
Q H R+LG+
Sbjct: 129 QYHARVLGV 137


>sp|PUR7_METKA|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 NHVRILGL 10
+H+R LGL
Sbjct: 136 DHIRALGL 143


>sp|MCM_SACS2|MINICHROMOSOME maintenance protein MCM|Saccharolobus solfataricus (strain ATCC

Query: 4 HVRILGL 10
HVRI+G+
Sbjct: 97 HVRIVGI 103


>sp|MCM_SACI5|MINICHROMOSOME maintenance protein MCM|Saccharolobus islandicus (strain REY15A)

Query: 4 HVRILGL 10
HVRI+G+
Sbjct: 97 HVRIVGI 103


>sp|SYE_CENSY|GLUTAMATE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 4 HVRILGL 10
H+R++GL
Sbjct: 457 HIRLMGL 463


>sp|Y805_METJA|UNCHARACTERIZED protein MJ0805|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 HVRILGL 10
HV+I+GL
Sbjct: 178 HVKIIGL 184


>sp|Y182_METKA|PUTATIVE ABC transporter ATP-binding protein|Methanopyrus kandleri (strain

Query: 2 QNHVRILG 9
+ H+R+LG
Sbjct: 50 KGHIRVLG 57


>sp|Y635_METJA|UNCHARACTERIZED protein MJ0635|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FQNHVRILGL 10
F+NH++ +G+
Sbjct: 115 FKNHLKEIGV 124


>sp|TRM1_METKA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanopyrus kandleri

Query: 2 QNHVRILG 9
++HVR++G
Sbjct: 214 RHHVRVIG 221




255|SequenceR|1280|1271|DSVLSFQNHV

>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 3 VLSFQNHV 10
VL+F+NH+
Sbjct: 733 VLTFRNHL 740


>sp|LEUC_METMA|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina mazei

Query: 1 DSVLSFQNHV 10
DS+ + QNH+
Sbjct: 72 DSINAAQNHI 81


>sp|RNP3_METVS|RIBONUCLEASE P protein component 3|Methanococcus vannielii (strain ATCC 35089

Query: 1 DSVLSFQNH 9
D ++FQNH
Sbjct: 26 DGSVAFQNH 34




256|SequenceR|1285|1276|NLYDEDSVLS

>sp|GUAAA_SACS2|GMP synthase [glutamine-hydrolyzing] subunit A|Saccharolobus

Query: 1 NLYDEDSVL 9
N++DED++L
Sbjct: 107 NIFDEDTIL 115


>sp|RPO3_METMA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina mazei (strain ATCC

Query: 1 NLYDEDSVL 9
NLYD SVL
Sbjct: 47 NLYDNTSVL 55


>sp|RPO3_METAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina acetivorans (strain

Query: 1 NLYDEDSVL 9
NLYD SVL
Sbjct: 47 NLYDNTSVL 55


>sp|MVHG_METTH|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter thermautotrophicus

Query: 1 NLYDEDSVL 9
NL+D+D V+
Sbjct: 100 NLWDKDEVI 108


>sp|Y589_METJA|UNCHARACTERIZED protein MJ0589|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NLYDEDSVL 9
N YDED +
Sbjct: 16 NYYDEDKIF 24


>sp|MVHG_METTM|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter marburgensis (strain ATCC

Query: 1 NLYDEDSVL 9
NL+D+D V+
Sbjct: 100 NLWDKDEVI 108


>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 1 NLYDEDSVL 9
N+Y ED+V+
Sbjct: 150 NVYGEDNVV 158


>sp|Y1865_METTH|UPF0288 protein MTH_1865|Methanothermobacter thermautotrophicus (strain

Query: 3 YDEDSVL 9
YDED V+
Sbjct: 123 YDEDEVI 129


>sp|PSTB1_NATPD|PHOSPHATE import ATP-binding protein PstB|Natronomonas pharaonis (strain ATCC

Query: 1 NLYDED 6
N+YDED
Sbjct: 105 NVYDED 110




257|SequenceR|1290|1281|DIVPPNLYDE

>sp|TRM56_METTP|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanothrix thermoacetophila

Query: 3 VPPNLYD 9
VPP++YD
Sbjct: 112 VPPDVYD 118


>sp|GLNA_METVO|GLUTAMINE synthetase|Methanococcus voltae

Query: 1 DIVPPNLYD 9
D VP NLYD
Sbjct: 389 DSVPSNLYD 397


>sp|Y1470_METJA|UNCHARACTERIZED protein MJ1470|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IVPPNLYDE 10
I+ PN+YDE
Sbjct: 108 IIYPNIYDE 116


>sp|Y048_ARCFU|UNCHARACTERIZED protein AF_0048|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DIVPPNLY 8
DIVPP+ Y
Sbjct: 107 DIVPPSYY 114


>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 2 IVPPNLY 8
I+PP+LY
Sbjct: 189 ILPPSLY 195


>sp|TDXH2_SULME|PEROXIREDOXIN 2|Sulfuracidifex metallicus (Sulfolobus metallicus)

Query: 4 PPNLYDE 10
PPN++DE
Sbjct: 179 PPNVFDE 185


>sp|PSA_METJA|PROTEASOME subunit alpha|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IVPPNLYD 9
+VPP+ YD
Sbjct: 3 MVPPSAYD 10


>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 2 IVPPNLY 8
I+PP LY
Sbjct: 189 ILPPTLY 195


>sp|RFRNP_HYPBU|RNA-FREE ribonuclease P|Hyperthermus butylicus (strain DSM 5456

Query: 3 VPPNLYDE 10
+PP +Y+E
Sbjct: 58 MPPTVYEE 65


>sp|DCDA_METJA|DIAMINOPIMELATE decarboxylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DIVPPNL 7
DIVPP+L
Sbjct: 431 DIVPPHL 437


>sp|TRPB_PICTO|TRYPTOPHAN synthase beta chain|Picrophilus torridus (strain ATCC 700027

Query: 1 DIVPPNLYD 9
DI+P N Y+
Sbjct: 12 DIIPENWYN 20


>sp|MALE_THELN|TREHALOSE/MALTOSE-BINDING protein MalE|Thermococcus litoralis (strain ATCC 51850

Query: 2 IVPPNLYDE 10
I PPN Y E
Sbjct: 268 ISPPNTYTE 276


>sp|Y1637_METJA|UNCHARACTERIZED protein MJ1637|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DIVPPNLYD 9
D+V NLYD
Sbjct: 153 DLVLKNLYD 161


>sp|RIBA_PICTO|GTP cyclohydrolase-2|Picrophilus torridus (strain ATCC 700027

Query: 2 IVPPNLYDE 10
I+PP +DE
Sbjct: 170 IIPPTKFDE 178


>sp|ILVC_PYRFU|KETOL-ACID reductoisomerase (NADP(+))|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DIVPPNLYDE 10
D+V P +Y E
Sbjct: 86 DLVQPKVYKE 95


>sp|EF2_ARCFU|ELONGATION factor 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DIVPPNLYDE 10
++VP NL+ E
Sbjct: 695 ELVPQNLFQE 704


>sp|SPT5_SACS2|TRANSCRIPTION elongation factor Spt5|Saccharolobus solfataricus (strain ATCC

Query: 2 IVPPNL 7
IVPPNL
Sbjct: 42 IVPPNL 47


>sp|AMPD_METSM|ANHYDROMEVALONATE phosphate decarboxylase|Methanobrevibacter smithii

Query: 2 IVPPNLY 8
IVP NLY
Sbjct: 148 IVPRNLY 154


>sp|AATA_SULAC|A-TYPE ATP synthase subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IVPPNLY 8
IVPPN++
Sbjct: 151 IVPPNVH 157


>sp|FER_THEAC|ZINC-CONTAINING ferredoxin|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DIVPPNLYD 9
D+ P NLY+
Sbjct: 77 DVCPVNLYE 85


>sp|RL1_NANEQ|LARGE ribosomal subunit protein uL1|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 IVPPNLYDE 10
I+PPNL ++
Sbjct: 130 ILPPNLNEK 138


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 VPPNLYDE 10
+PPN Y E
Sbjct: 257 IPPNTYIE 264




258|SequenceR|1295|1286|QVDMRDIVPP

>sp|Y138_METJA|PUTATIVE glutamine amidotransferase-like protein MJ0138|Methanocaldococcus

Query: 3 DMRDIVP 9
D+RDIVP
Sbjct: 280 DVRDIVP 286


>sp|DCDA_METJA|DIAMINOPIMELATE decarboxylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 RDIVPP 10
+DIVPP
Sbjct: 430 KDIVPP 435


>sp|PPAC_METTP|MANGANESE-DEPENDENT inorganic pyrophosphatase|Methanothrix thermoacetophila (strain

Query: 1 QVDMRDIVP 9
Q+ M+D+VP
Sbjct: 30 QLGMKDVVP 38


>sp|RSMA_SACS2|PROBABLE ribosomal RNA small subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 VDMRDIVPP 10
+ ++DI+PP
Sbjct: 112 IQIKDIIPP 120


>sp|SEPS_METAR|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 DMRDIVPP 10
DMRD+V P
Sbjct: 344 DMRDMVYP 351


>sp|SYS_HALLT|SERINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 DMRDIVPP 10
D RD+ PP
Sbjct: 192 DYRDVFPP 199


>sp|RL15_HALMA|LARGE ribosomal subunit protein uL15|Haloarcula marismortui (strain

Query: 1 QVDMRDIV 8
+VD+RD+V
Sbjct: 91 RVDVRDVV 98


>sp|DNAG_SACS2|DNA primase DnaG|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QVDMRDIVP 9
+V +RDI+P
Sbjct: 337 KVQVRDIIP 345


>sp|DNAG_SACI7|DNA primase DnaG|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 QVDMRDIVP 9
+V +RDI+P
Sbjct: 333 KVQVRDIIP 341


>sp|DNAG_SACI6|DNA primase DnaG|Saccharolobus islandicus (strain M.16.4 /

Query: 1 QVDMRDIVP 9
+V +RDI+P
Sbjct: 333 KVQVRDIIP 341


>sp|DNAG_SACI4|DNA primase DnaG|Saccharolobus islandicus (strain M.14.25 /

Query: 1 QVDMRDIVP 9
+V +RDI+P
Sbjct: 333 KVQVRDIIP 341


>sp|DNAG_SACI3|DNA primase DnaG|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 QVDMRDIVP 9
+V +RDI+P
Sbjct: 333 KVQVRDIIP 341


>sp|DNAG_SACI2|DNA primase DnaG|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 QVDMRDIVP 9
+V +RDI+P
Sbjct: 333 KVQVRDIIP 341


>sp|DNAG_SACI1|DNA primase DnaG|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 QVDMRDIVP 9
+V +RDI+P
Sbjct: 333 KVQVRDIIP 341




259|SequenceR|1300|1291|TLKTLQVDMR

>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 TLKTLQVDMR 10
TLK L VD+R
Sbjct: 365 TLKLLNVDVR 374


>sp|Y612_METJA|PROBABLE arogenate/prephenate dehydrogenase|Methanocaldococcus jannaschii

Query: 1 TLKTLQVDMR 10
TLK L VD++
Sbjct: 193 TLKELNVDIK 202




260|SequenceR|1305|1296|VTRYLTLKTL

>sp|Y886_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0886|Methanocaldococcus

Query: 1 VTRYLTLKTL 10
+TRYLTL ++
Sbjct: 1 MTRYLTLHSI 10


>sp|ATGT_PYRAB|TRNA-GUANINE(15) transglycosylase|Pyrococcus abyssi (strain GE5 /

Query: 1 VTRYLTL 7
VT+YLTL
Sbjct: 407 VTKYLTL 413


>sp|ENO3_METHJ|ENOLASE 3|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VTRYLTLKTL 10
+TR +TL+T+
Sbjct: 3 ITRAITLRTI 12




261|SequenceR|1310|1301|IGPQIVTRYL

>sp|RSMA_METKA|PROBABLE ribosomal RNA small subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 GPQIVTRYL 10
GP ++TRYL
Sbjct: 54 GPGLLTRYL 62


>sp|DABA_HALMA|PROBABLE inorganic carbon transporter subunit|Haloarcula marismortui (strain

Query: 2 GPQIVTRYL 10
GP +VT+++
Sbjct: 658 GPMVVTQWI 666


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 1 IGPQIVTRYL 10
+GP +VT+++
Sbjct: 656 LGPLVVTQWI 665


>sp|Y2001_PYRHO|UNCHARACTERIZED protein PH2001|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IGPQIVTRYL 10
+GP+ + RYL
Sbjct: 15 LGPRYLPRYL 24




262|SequenceR|1315|1306|IDPHYIGPQI

>sp|Y449_METJA|UNCHARACTERIZED transporter MJ0449|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IDPHYIGPQI 10
I HY+GP+I
Sbjct: 229 IKAHYVGPRI 238


>sp|Y058_ARCFU|UPF0113 protein AF_0058|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IDPHYIGPQI 10
++PHY G +I
Sbjct: 56 LNPHYAGVKI 65


>sp|DNLI_METPE|DNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 IDPHYIGPQ 9
I P Y+ PQ
Sbjct: 362 IGPEYLAPQ 370


>sp|TRM1_SACI3|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 1 IDPHYIGP 8
I P YIGP
Sbjct: 273 IGPLYIGP 280


>sp|TRM1_SACI7|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 1 IDPHYIGP 8
I P YIGP
Sbjct: 273 IGPLYIGP 280


>sp|TRM1_SACI2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 1 IDPHYIGP 8
I P YIGP
Sbjct: 273 IGPLYIGP 280


>sp|TRM1_SACI1|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 1 IDPHYIGP 8
I P YIGP
Sbjct: 273 IGPLYIGP 280


>sp|APGM_SACI6|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 DPHYIGPQI 10
DPHY G ++
Sbjct: 168 DPHYEGLKV 176


>sp|APGM_SACI4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 DPHYIGPQI 10
DPHY G ++
Sbjct: 168 DPHYEGLKV 176


>sp|APGM_SACI3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.27)

Query: 2 DPHYIGPQI 10
DPHY G ++
Sbjct: 168 DPHYEGLKV 176


>sp|APGM_SACI1|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 DPHYIGPQI 10
DPHY G ++
Sbjct: 168 DPHYEGLKV 176


>sp|TRM1_SACI6|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 1 IDPHYIGP 8
I P YIGP
Sbjct: 273 IGPLYIGP 280


>sp|TRM1_SACI4|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 1 IDPHYIGP 8
I P YIGP
Sbjct: 273 IGPLYIGP 280


>sp|RS8E_PICTO|SMALL ribosomal subunit protein eS8|Picrophilus torridus (strain ATCC

Query: 2 DPHYIGPQI 10
DPHY+ I
Sbjct: 86 DPHYVQRNI 94


>sp|PURL_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina barkeri (strain Fusaro /

Query: 1 IDPHYIGP 8
+DP Y GP
Sbjct: 113 MDPLYFGP 120


>sp|APGM_SACI7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 DPHYIGPQI 10
DPHY G ++
Sbjct: 168 DPHYEGLKV 176


>sp|APGM_SACI2|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 DPHYIGPQI 10
DPHY G ++
Sbjct: 168 DPHYEGLKV 176


>sp|TRM1_SACS2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus solfataricus

Query: 1 IDPHYIGP 8
I P YIGP
Sbjct: 273 IGPLYIGP 280


>sp|PURL_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IDPHYIGP 8
+DP Y GP
Sbjct: 113 MDPLYFGP 120


>sp|CBIA_THEAC|COBYRINATE a,c-diamide synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IDPHYIGPQ 9
I P YI PQ
Sbjct: 40 IGPDYIDPQ 48


>sp|Y2214_ARCFU|UNCHARACTERIZED protein AF_2214|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IDPHYIGPQI 10
IDP I P++
Sbjct: 5 IDPQQIDPEL 14


>sp|TRPD_METTM|ANTHRANILATE phosphoribosyltransferase|Methanothermobacter marburgensis (strain

Query: 2 DPHYIGP 8
DP+ +GP
Sbjct: 198 DPYLVGP 204


>sp|PURL_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IDPHYIGP 8
+DP Y GP
Sbjct: 113 MDPLYFGP 120


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 2 DPHYIGP 8
DPH GP
Sbjct: 34 DPHQDGP 40


>sp|PYRG_METB6|CTP synthase|Methanoregula boonei (strain DSM 21154

Query: 1 IDPHYI 6
++PHYI
Sbjct: 458 VNPHYI 463


>sp|PYRB_HALSA|ASPARTATE carbamoyltransferase catalytic subunit|Halobacterium salinarum

Query: 1 IDPHYIGPQ 9
+D H+I P+
Sbjct: 177 VDQHFISPE 185


>sp|CBIA_THEVO|COBYRINATE a,c-diamide synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IDPHYIGPQ 9
+ P YI PQ
Sbjct: 40 VGPDYIDPQ 48


>sp|APEH_AERPE|ACYLAMINO-ACID-RELEASING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 IDPHY 5
+DPHY
Sbjct: 68 LDPHY 72


>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 IDPHYIG 7
ID HY+G
Sbjct: 282 IDDHYLG 288


>sp|MCRW_METFV|METHYL-COENZYME M reductase II operon|Methanothermus fervidus (strain ATCC 43054

Query: 1 IDPHYIG 7
+DP YIG
Sbjct: 143 LDPRYIG 149


>sp|METXA_HALLT|HOMOSERINE O-acetyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 IDPHYIGPQI 10
++P ++GP +
Sbjct: 383 VEPEHVGPPL 392




263|SequenceR|1320|1311|PHLLQIDPHY

>sp|MCM_SACS2|MINICHROMOSOME maintenance protein MCM|Saccharolobus solfataricus (strain ATCC

Query: 2 HLLQIDPHY 10
H+LQ+DP Y
Sbjct: 81 HILQLDPTY 89


>sp|MCM_SACI5|MINICHROMOSOME maintenance protein MCM|Saccharolobus islandicus (strain REY15A)

Query: 2 HLLQIDPHY 10
H+LQ+DP Y
Sbjct: 81 HILQLDPTY 89


>sp|ILVD_ARCFU|DIHYDROXY-ACID dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PHLLQIDP 8
PH++ IDP
Sbjct: 298 PHIVSIDP 305


>sp|PSB_HALWD|PROTEASOME subunit beta|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PHLLQIDP 8
PH+ IDP
Sbjct: 156 PHIYSIDP 163


>sp|PSB_HALVD|PROTEASOME subunit beta|Haloferax volcanii (strain ATCC 29605

Query: 1 PHLLQIDP 8
PH+ IDP
Sbjct: 156 PHIYSIDP 163


>sp|PSB2_PYRNV|PROTEASOME subunit beta 2|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PHLLQIDP 8
PHL+ +DP
Sbjct: 117 PHLIVMDP 124


>sp|PSB2_PYRCJ|PROTEASOME subunit beta 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PHLLQIDP 8
PHL+ +DP
Sbjct: 117 PHLIVMDP 124


>sp|PSB2_PYRAE|PROTEASOME subunit beta 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PHLLQIDP 8
PHL+ +DP
Sbjct: 117 PHLIVMDP 124


>sp|PSB1_PYRIL|PROTEASOME subunit beta 1|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PHLLQIDP 8
PHL+ +DP
Sbjct: 117 PHLIVMDP 124


>sp|Y835_METJA|UNCHARACTERIZED protein MJ0835|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PHLLQIDP 8
P ++QIDP
Sbjct: 359 PDIIQIDP 366


>sp|SYFB_PYRAB|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 HLLQIDPHY 10
HL++ PHY
Sbjct: 191 HLIKDKPHY 199


>sp|GGGPS_HALSA|GERANYLGERANYLGLYCERYL phosphate synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 HLLQIDP 8
H+L+IDP
Sbjct: 10 HVLKIDP 16


>sp|GGGPS_HALS3|GERANYLGERANYLGLYCERYL phosphate synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 HLLQIDP 8
H+L+IDP
Sbjct: 10 HVLKIDP 16


>sp|GGGPS_HALWD|GERANYLGERANYLGLYCERYL phosphate synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 HLLQIDP 8
H+L++DP
Sbjct: 10 HVLKVDP 16


>sp|NADA_HALSA|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 5 QIDPHY 10
QIDP+Y
Sbjct: 332 QIDPNY 337


>sp|NADA_HALS3|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 5 QIDPHY 10
QIDP+Y
Sbjct: 332 QIDPNY 337


>sp|CAPPA_METHJ|PHOSPHOENOLPYRUVATE carboxylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PHLLQIDPH 9
P ++IDPH
Sbjct: 439 PDWIEIDPH 447


>sp|NADA_HALMA|QUINOLINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 5 QIDPHY 10
QIDP+Y
Sbjct: 332 QIDPNY 337


>sp|Y1962_ARCFU|UNCHARACTERIZED protein AF_1962|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HLLQIDP 8
HLLQ DP
Sbjct: 32 HLLQPDP 38




264|SequenceR|1325|1316|FELNIPHLLQ

>sp|KAD_METAR|ADENYLATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 2 ELNIPHL 8
ELN+PH+
Sbjct: 23 ELNVPHI 29


>sp|RFCS_ARCFU|REPLICATION factor C small subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 NIPHLL 9
NIPHLL
Sbjct: 37 NIPHLL 42


>sp|IF5A_METAR|TRANSLATION initiation factor 5A|Methanocella arvoryzae (strain DSM 22066

Query: 1 FELNIPHLLQ 10
FEL IP LQ
Sbjct: 95 FELEIPEDLQ 104


>sp|RFCS_SACS2|REPLICATION factor C small subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 ELNIPHLL 9
E N+PHLL
Sbjct: 38 EKNMPHLL 45


>sp|PRIS_PYRFU|DNA primase small subunit PriS|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FELNIPHLL 9
+N+PHLL
Sbjct: 215 LRVNVPHLL 223


>sp|RFCS_STAMF|REPLICATION factor C small subunit|Staphylothermus marinus (strain ATCC 43588

Query: 2 ELNIPHLL 9
E N+PHLL
Sbjct: 41 ERNMPHLL 48


>sp|TRPD_IGNH4|ANTHRANILATE phosphoribosyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 LNIPHLLQ 10
+N PHLL+
Sbjct: 1 MNAPHLLE 8


>sp|RFCS_SULAC|REPLICATION factor C small subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 2 ELNIPHLL 9
E N+PHLL
Sbjct: 35 EKNMPHLL 42


>sp|RFCS_METMJ|REPLICATION factor C small subunit|Methanoculleus marisnigri (strain ATCC

Query: 4 NIPHLL 9
N+PHLL
Sbjct: 38 NLPHLL 43


>sp|RFCS_METMA|REPLICATION factor C small subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 NIPHLL 9
N+PHLL
Sbjct: 45 NLPHLL 50


>sp|RFCS_METBF|REPLICATION factor C small subunit|Methanosarcina barkeri (strain Fusaro /

Query: 4 NIPHLL 9
N+PHLL
Sbjct: 41 NLPHLL 46


>sp|RFCS_METB6|REPLICATION factor C small subunit|Methanoregula boonei (strain DSM 21154

Query: 4 NIPHLL 9
N+PHLL
Sbjct: 38 NLPHLL 43


>sp|RFCS_METAR|REPLICATION factor C small subunit|Methanocella arvoryzae (strain DSM 22066

Query: 4 NIPHLL 9
N+PHLL
Sbjct: 37 NLPHLL 42


>sp|RFCS_METAC|REPLICATION factor C small subunit|Methanosarcina acetivorans (strain ATCC

Query: 4 NIPHLL 9
N+PHLL
Sbjct: 45 NLPHLL 50


>sp|RFCS_PYRCJ|REPLICATION factor C small subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 NIPHLL 9
N+PHLL
Sbjct: 36 NLPHLL 41


>sp|RFCS_THEPD|REPLICATION factor C small subunit|Thermofilum pendens (strain DSM 2475

Query: 4 NIPHLL 9
N+PHLL
Sbjct: 36 NMPHLL 41


>sp|RFCS2_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 NIPHLL 9
N+PHLL
Sbjct: 36 NMPHLL 41


>sp|RFCS1_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 4 NIPHLL 9
N+PHLL
Sbjct: 36 NMPHLL 41


>sp|RFCS1_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 NIPHLL 9
N+PHLL
Sbjct: 36 NMPHLL 41


>sp|Y485_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LNIPHLL 9
LN+PH++
Sbjct: 140 LNVPHII 146


>sp|SURE_METBU|5'-NUCLEOTIDASE SurE|Methanococcoides burtonii (strain DSM 6242

Query: 1 FELNIPHLLQ 10
+NIPH ++
Sbjct: 175 LNINIPHFVE 184


>sp|RFCS2_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 NIPHLL 9
N+PHLL
Sbjct: 36 NMPHLL 41


>sp|RFCS1_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 NIPHLL 9
N+PHLL
Sbjct: 36 NMPHLL 41


>sp|RFCS_SULTO|REPLICATION factor C small subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 NIPHLL 9
N+PHLL
Sbjct: 39 NMPHLL 44


>sp|RFCS_NANEQ|REPLICATION factor C small subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 NIPHLL 9
N+PHLL
Sbjct: 34 NMPHLL 39


>sp|RFCS2_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 4 NIPHLL 9
N+PHLL
Sbjct: 36 NMPHLL 41


>sp|SYTC_METS5|THREONINE--TRNA ligase catalytic subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 ELNIPHLLQ 10
ELN+P++++
Sbjct: 342 ELNVPYVVK 350


>sp|CBIJ_METMI|COBALT-PRECORRIN-6A reductase|Methanococcus maripaludis (Methanococcus deltae)

Query: 2 ELNIPHL 8
ELNIP++
Sbjct: 91 ELNIPYI 97


>sp|RPO1C_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Sulfurisphaera tokodaii (strain DSM

Query: 1 FELNIPHLL 9
FE+ + HLL
Sbjct: 344 FEVTVKHLL 352


>sp|RPO1C_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Sulfolobus acidocaldarius (strain ATCC

Query: 1 FELNIPHLL 9
FE+ + HLL
Sbjct: 345 FEVTVKHLL 353


>sp|RPO1C_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus shibatae (strain ATCC

Query: 1 FELNIPHLL 9
FE+ + HLL
Sbjct: 344 FEVTVKHLL 352


>sp|RPO1C_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus solfataricus (strain

Query: 1 FELNIPHLL 9
FE+ + HLL
Sbjct: 344 FEVTVKHLL 352


>sp|RPO1C_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 FELNIPHLL 9
FE+ + HLL
Sbjct: 344 FEVTVKHLL 352


>sp|RPO1C_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 FELNIPHLL 9
FE+ + HLL
Sbjct: 344 FEVTVKHLL 352


>sp|RPO1C_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 FELNIPHLL 9
FE+ + HLL
Sbjct: 344 FEVTVKHLL 352


>sp|RPO1C_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 FELNIPHLL 9
FE+ + HLL
Sbjct: 344 FEVTVKHLL 352


>sp|RPO1C_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 FELNIPHLL 9
FE+ + HLL
Sbjct: 344 FEVTVKHLL 352


>sp|RPO1C_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 FELNIPHLL 9
FE+ + HLL
Sbjct: 344 FEVTVKHLL 352


>sp|RPO1C_METS5|DNA-DIRECTED RNA polymerase subunit Rpo1C|Metallosphaera sedula (strain ATCC

Query: 1 FELNIPHLL 9
FE+ + HLL
Sbjct: 344 FEVTVKHLL 352


>sp|RFCS_AERPE|REPLICATION factor C small subunit|Aeropyrum pernix (strain ATCC 700893

Query: 4 NIPHLL 9
N+PHLL
Sbjct: 39 NMPHLL 44


>sp|DADD_METST|5'-DEOXYADENOSINE deaminase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 LNIPHLL 9
+N+PH++
Sbjct: 366 MNVPHMI 372


>sp|Y1178_METJA|UNCHARACTERIZED glycosyltransferase MJ1178|Methanocaldococcus jannaschii (strain

Query: 2 ELNIPHLL 9
+L+IPH+L
Sbjct: 105 KLSIPHIL 112


>sp|CAS3_METJA|PUTATIVE CRISPR-associated nuclease/helicase Cas3|Methanocaldococcus

Query: 3 LNIPHLL 9
++IPHLL
Sbjct: 375 MDIPHLL 381




265|SequenceR|1330|1321|NRNVLFELNI

>sp|SELD_METJA|SELENIDE, water dikinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NRNVLFELNI 10
N NVL E+N+
Sbjct: 262 NSNVLIEINL 271


>sp|G1PDH_METS5|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Metallosphaera sedula (strain ATCC 51363

Query: 2 RNVLFELNI 10
R+ LF+LN+
Sbjct: 25 RDYLFQLNV 33


>sp|KHSE_METM6|HOMOSERINE kinase|Methanococcus maripaludis (strain C6 /

Query: 3 NVLFELNI 10
N LFELN+
Sbjct: 109 NELFELNL 116


>sp|BRIX_METBU|PROBABLE Brix domain-containing ribosomal biogenesis|Methanococcoides

Query: 3 NVLFELNI 10
N+LF LNI
Sbjct: 138 NMLFRLNI 145


>sp|EI2BL_PYRAB|PUTATIVE translation initiation factor eIF-2B|Pyrococcus abyssi (strain GE5

Query: 2 RNVLFELN 9
RNVLF+L
Sbjct: 247 RNVLFDLT 254




266|SequenceR|1335|1326|WSAALNRNVL

>sp|PRIL_PYRHO|DNA primase large subunit PriL|Pyrococcus horikoshii (strain ATCC

Query: 1 WSAALNRNV 9
WS A RNV
Sbjct: 170 WSKAFERNV 178


>sp|PRIL_PYRFU|DNA primase large subunit PriL|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WSAALNRNV 9
WS A RNV
Sbjct: 170 WSKAFERNV 178


>sp|CAS2_METTH|CRISPR-ASSOCIATED endoribonuclease Cas2|Methanothermobacter thermautotrophicus

Query: 4 ALNRNVL 10
A+NRNVL
Sbjct: 74 AMNRNVL 80




267|SequenceR|1340|1331|PVKHYWSAAL

>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 1 PVKHYWSAAL 10
P+K YW AAL
Sbjct: 699 PLKDYWYAAL 708


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 PVKHYWSAAL 10
P+K YW AL
Sbjct: 693 PIKEYWYKAL 702


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 PVKHYWSAAL 10
P+K YW AL
Sbjct: 693 PIKEYWYKAL 702


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 PVKHYWSAAL 10
P+K YW AL
Sbjct: 693 PIKEYWYKAL 702


>sp|Y1085_PICTO|PUTATIVE adenine deaminase PTO1085|Picrophilus torridus (strain ATCC 700027

Query: 1 PVKHYWSAAL 10
PVK++WS L
Sbjct: 152 PVKNFWSVRL 161


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 1 PVKHYWSAAL 10
P+K YW AL
Sbjct: 693 PIKDYWYNAL 702


>sp|SYT_METST|THREONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 VKHYWSAAL 10
+KHYW+A +
Sbjct: 413 MKHYWNAKV 421


>sp|FUMC_METAC|FUMARATE hydratase class II|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PVKHYWSA 8
P HYW A
Sbjct: 29 PADHYWGA 36


>sp|SYT_METS3|THREONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 KHYWSAAL 10
KHYWS +
Sbjct: 407 KHYWSCKI 414


>sp|CAS1A_ARCFU|CRISPR-ASSOCIATED endonuclease Cas1 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KHYWSA 8
KHYW A
Sbjct: 173 KHYWDA 178


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 1 PVKHYWSAAL 10
P+K YW L
Sbjct: 693 PIKDYWYKTL 702


>sp|ATGT_ARCFU|TRNA-GUANINE(15) transglycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VKHYW 6
VKHYW
Sbjct: 343 VKHYW 347


>sp|PDXS_HYPBU|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Hyperthermus butylicus (strain

Query: 2 VKHYWSAAL 10
+ HYW A L
Sbjct: 119 IGHYWEAKL 127


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VKHYWSAAL 10
VK+YWS+ L
Sbjct: 113 VKNYWSSML 121


>sp|SYT_METTH|THREONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 KHYWSAAL 10
KHYW A +
Sbjct: 406 KHYWIAKM 413


>sp|Y920_METJA|UNCHARACTERIZED protein MJ0920|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PVKHYW 6
P+K YW
Sbjct: 43 PIKRYW 48


>sp|Y694_METJA|UNCHARACTERIZED NOP5 family protein MJ0694|Methanocaldococcus jannaschii (strain

Query: 4 HYWSAAL 10
HYWS L
Sbjct: 104 HYWSTEL 110


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KHYWSA 8
KH+W+A
Sbjct: 28 KHFWTA 33


>sp|HIS3_METTP|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 VKHYWS 7
V HYWS
Sbjct: 44 VAHYWS 49


>sp|HIS3_METBU|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanococcoides burtonii (strain DSM 6242

Query: 2 VKHYWS 7
+ HYWS
Sbjct: 46 IAHYWS 51


>sp|ARLY_SULAC|ARGININOSUCCINATE lyase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 KHYWS 7
KHYW+
Sbjct: 315 KHYWN 319


>sp|HIS3_METTH|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanothermobacter thermautotrophicus (strain

Query: 4 HYWSAA 9
HYWS +
Sbjct: 57 HYWSTS 62


>sp|HIS3_METS3|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 HYWSAA 9
HYWS +
Sbjct: 48 HYWSTS 53


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 VKHYWSAAL 10
V++ WSAAL
Sbjct: 614 VEYPWSAAL 622


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 4 HYWSA 8
HYW+A
Sbjct: 221 HYWAA 225


>sp|SYT_METKA|THREONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 KHYW 6
KHYW
Sbjct: 415 KHYW 418


>sp|HIS3_METKA|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanopyrus kandleri (strain AV19 /

Query: 4 HYWSAA 9
HYWS +
Sbjct: 63 HYWSTS 68


>sp|ARLY_SULTO|ARGININOSUCCINATE lyase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 KHYW 6
KHYW
Sbjct: 315 KHYW 318


>sp|NFI_IGNH4|ENDONUCLEASE V|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PVKHYWSAA 9
P+KHY+ A
Sbjct: 59 PLKHYYVVA 67


>sp|RPO1C_META3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus aeolicus (strain ATCC

Query: 2 VKHYWSAA 9
VKH +SAA
Sbjct: 339 VKHLYSAA 346


>sp|HIS3_ARCFU|PHOSPHORIBOSYL-AMP cyclohydrolase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 HYWS 7
HYWS
Sbjct: 44 HYWS 47


>sp|GFCR_HALMA|TRANSCRIPTIONAL regulator GfcR|Haloarcula marismortui (strain ATCC 43049

Query: 1 PVKHYW 6
P KH W
Sbjct: 121 PTKHQW 126


>sp|GFCR_HALWD|TRANSCRIPTIONAL regulator GfcR|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PVKHYW 6
P KH W
Sbjct: 124 PAKHQW 129


>sp|GFCR_HALVD|TRANSCRIPTIONAL regulator GfcR|Haloferax volcanii (strain ATCC 29605

Query: 1 PVKHYW 6
P KH W
Sbjct: 122 PAKHQW 127


>sp|GFCR_HALLT|TRANSCRIPTIONAL regulator GfcR|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PVKHYW 6
P KH W
Sbjct: 122 PAKHQW 127


>sp|SYT_METB6|THREONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 4 HYWSAAL 10
HYW A +
Sbjct: 412 HYWEAKI 418




268|SequenceR|1345|1336|KIEVVPVKHY

>sp|RFCL_AERPE|REPLICATION factor C large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 KIEVVPVKHY 10
K EV+P+ HY
Sbjct: 378 KTEVLPILHY 387


>sp|LONB_HALSA|ARCHAEAL Lon protease|Halobacterium salinarum (strain ATCC 700922

Query: 1 KIEVVPVKH 9
+IE++PV H
Sbjct: 648 QIEIIPVTH 656


>sp|Y346_METJA|UNCHARACTERIZED protein MJ0346|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KIEVVPVKH 9
K E++P+KH
Sbjct: 74 KTELIPIKH 82


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 4 VVPVKHY 10
VVP KHY
Sbjct: 682 VVPEKHY 688


>sp|NADB_PYRAB|L-ASPARTATE oxidase|Pyrococcus abyssi (strain GE5 /

Query: 2 IEVVPVKHY 10
I V PV HY
Sbjct: 301 IPVTPVAHY 309


>sp|Y1471_METJA|UNCHARACTERIZED protein MJ1471|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EVVPVKHY 10
E +P+KHY
Sbjct: 79 ERIPLKHY 86


>sp|NADM_METAC|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IEVVPVKHY 10
+E +PV+HY
Sbjct: 61 LENLPVRHY 69


>sp|NADB_PYRHO|L-ASPARTATE oxidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IEVVPVKHY 10
I + PV HY
Sbjct: 301 IPITPVAHY 309


>sp|RASEA_THEKO|ARCHAEOSINE synthase subunit beta|Thermococcus kodakarensis (strain ATCC

Query: 3 EVVPVKHY 10
E+VP KH+
Sbjct: 129 EIVPDKHF 136


>sp|AROA_NITMS|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 IEVVPVKH 9
IE+V VKH
Sbjct: 321 IEIVNVKH 328


>sp|NADM_METBF|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 IEVVPVKHY 10
+E +P++HY
Sbjct: 61 LENLPIRHY 69


>sp|LONB_ARCFU|ARCHAEAL Lon protease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KIEVVPVKH 9
KIEV+PV
Sbjct: 583 KIEVIPVSR 591


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 1 KIEVVPVKH 9
KIE++PV+
Sbjct: 933 KIEIIPVER 941


>sp|SYS_PYRCJ|SERINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 IEVVPVKHY 10
++ VPV+H+
Sbjct: 119 VDSVPVRHW 127


>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KIEVVPVK 8
KIE++P K
Sbjct: 599 KIEIIPAK 606


>sp|NADB_PYRFU|L-ASPARTATE oxidase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IEVVPVKHY 10
I V PV HY
Sbjct: 298 IPVTPVAHY 306


>sp|Y495_ARCFU|UNCHARACTERIZED protein AF_0495|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KIEVVPVKH 9
KI+ VP KH
Sbjct: 63 KIDAVPCKH 71


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 KIEVVPVKHY 10
+IE++P+K +
Sbjct: 335 EIEIIPMKEF 344




269|SequenceR|1350|1341|SDLHGKIEVV

>sp|Y1162_METJA|UNCHARACTERIZED protein MJ1162|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SDLHGKI 7
+DLHGK+
Sbjct: 11 TDLHGKL 17


>sp|SUA5_SULTO|THREONYLCARBAMOYL-AMP synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DLHGKIEVV 10
DL+G+++V+
Sbjct: 162 DLNGRVDVI 170


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter thermautotrophicus

Query: 2 DLHGKIE 8
D+HGK++
Sbjct: 322 DVHGKLD 328


>sp|NSR_THEKO|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Thermococcus kodakarensis

Query: 2 DLHGKIEVV 10
DLH K EV+
Sbjct: 75 DLHLKAEVI 83




270|SequenceR|1355|1346|LSVNMSDLHG

>sp|SELD_METKA|SELENIDE, water dikinase|Methanopyrus kandleri (strain AV19 /

Query: 3 VNMSDLHG 10
V M+DLHG
Sbjct: 8 VEMADLHG 15


>sp|RS15_METBF|SMALL ribosomal subunit protein uS15|Methanosarcina barkeri (strain

Query: 1 LSVNMSDLH 9
LSVN D+H
Sbjct: 102 LSVNKKDVH 110


>sp|RS15_METAC|SMALL ribosomal subunit protein uS15|Methanosarcina acetivorans (strain

Query: 1 LSVNMSDLH 9
LSVN D+H
Sbjct: 102 LSVNKKDVH 110


>sp|MEND_HALLT|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 MSDLHG 10
M+DLHG
Sbjct: 544 MADLHG 549


>sp|NPD_CALMQ|NAD-DEPENDENT protein deacetylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 SVNMSDLHG 10
S+N+ +LHG
Sbjct: 116 SINVIELHG 124


>sp|IORB_METTM|INDOLEPYRUVATE oxidoreductase subunit IorB|Methanothermobacter marburgensis

Query: 1 LSVNMSDLHG 10
++V MS++HG
Sbjct: 31 MNVVMSEIHG 40


>sp|THIL_METTH|THIAMINE-MONOPHOSPHATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LSVNMSDL 8
++VNMSDL
Sbjct: 74 VTVNMSDL 81




271|SequenceR|1360|1351|LDEQNLSVNM

>sp|GLYA_CALMQ|SERINE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 2 DEQNLSVNM 10
DE+N S+N+
Sbjct: 146 DEENFSINV 154


>sp|KAE1B_METST|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 LDEQNLSVN 9
L+E NLS+N
Sbjct: 60 LEESNLSIN 68


>sp|Y419_METJA|UNCHARACTERIZED protein MJ0419|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDEQNLSVNM 10
+D++NL +N+
Sbjct: 62 IDKENLKINL 71


>sp|GLYA_SACI6|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LDEQNLSVNM 10
DEQN++V++
Sbjct: 143 FDEQNINVDV 152


>sp|PURA_NATPD|ADENYLOSUCCINATE synthetase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LDEQNLSVN 9
LDE+ ++VN
Sbjct: 203 LDEEGMTVN 211


>sp|SYS2_METTP|TYPE-2 serine--tRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 QNLSVN 9
QNLSVN
Sbjct: 432 QNLSVN 437


>sp|OGT_THEBM|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Thermococcus barophilus (strain DSM 11836

Query: 1 LDEQNLSVNM 10
L+ +N+SVN+
Sbjct: 48 LERRNVSVNL 57




272|SequenceR|1365|1356|RFLLNLDEQN

>sp|GLPK_THEON|GLYCEROL kinase|Thermococcus onnurineus (strain NA1)

Query: 1 RFLLNLDE 8
RF+L+LDE
Sbjct: 3 RFILSLDE 10


>sp|PURL_THESM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus sibiricus (strain DSM 12597

Query: 1 RFLLNLDEQN 10
RFL++ +E+N
Sbjct: 652 RFLISFEEKN 661


>sp|CSA2B_SACS2|CRISPR-ASSOCIATED aCascade subunit Cas7/Csa2 2|Saccharolobus solfataricus (strain

Query: 1 RFLLNLDEQN 10
RFL+NL+ N
Sbjct: 7 RFLVNLESLN 16


>sp|RS4_SACS2|SMALL ribosomal subunit protein uS4|Saccharolobus solfataricus (strain

Query: 2 FLLNLDEQN 10
+++N+DE+N
Sbjct: 143 YIVNVDEEN 151


>sp|IF2P_METMP|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 FLLNLDEQN 10
F+LN +E+N
Sbjct: 145 FILNFNEKN 153


>sp|IF2P_METM5|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 FLLNLDEQN 10
F+LN +E+N
Sbjct: 145 FILNFNEKN 153


>sp|RS4_SACI7|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 2 FLLNLDEQN 10
+++N+DE+N
Sbjct: 143 YIVNVDEEN 151


>sp|RS4_SACI6|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 2 FLLNLDEQN 10
+++N+DE+N
Sbjct: 143 YIVNVDEEN 151


>sp|RS4_SACI4|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 2 FLLNLDEQN 10
+++N+DE+N
Sbjct: 143 YIVNVDEEN 151


>sp|RS4_SACI3|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 2 FLLNLDEQN 10
+++N+DE+N
Sbjct: 143 YIVNVDEEN 151


>sp|RS4_SACI2|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 2 FLLNLDEQN 10
+++N+DE+N
Sbjct: 143 YIVNVDEEN 151


>sp|RS4_SACI1|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 2 FLLNLDEQN 10
+++N+DE+N
Sbjct: 143 YIVNVDEEN 151


>sp|IF2P_METM7|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 FLLNLDEQN 10
F+LN +E+N
Sbjct: 145 FILNFNEKN 153


>sp|IF2P_METM6|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 FLLNLDEQN 10
F+LN +E+N
Sbjct: 145 FILNFNEKN 153


>sp|OGT_METBF|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 FLLNLDEQN 10
FLL L+E N
Sbjct: 148 FLLKLEENN 156


>sp|RAD50_METAC|DNA double-strand break repair Rad50|Methanosarcina acetivorans (strain

Query: 1 RFLLNLDEQ 9
R LLN+DE+
Sbjct: 124 RTLLNMDEE 132


>sp|Y1170_METST|PUTATIVE nickel insertion protein|Methanosphaera stadtmanae (strain ATCC

Query: 2 FLLNLDEQ 9
+LLNLD++
Sbjct: 146 YLLNLDKE 153


>sp|OGT_METMA|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FLLNLDEQN 10
FLL L+E N
Sbjct: 148 FLLKLEENN 156


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 2 FLLNLDEQN 10
F+LN +E+N
Sbjct: 703 FILNFNEKN 711


>sp|ARCH_SULTO|PROTEIN archease|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RFLLNLDEQN 10
+F +N+DE+N
Sbjct: 82 KFYVNIDEKN 91


>sp|RNP1_SACS2|RIBONUCLEASE P protein component 1|Saccharolobus solfataricus (strain ATCC

Query: 2 FLLNLDEQN 10
FL+ L+E+N
Sbjct: 35 FLIKLEEKN 43


>sp|HIS8_METJA|HISTIDINOL-PHOSPHATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LLNLDEQN 10
LN+DE+N
Sbjct: 85 FLNVDEEN 92


>sp|LADH_METVS|LACTALDEHYDE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 3 LLNLDEQN 10
+LN+DE N
Sbjct: 354 VLNIDEDN 361


>sp|LADH_METMP|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 3 LLNLDEQN 10
++N+DE+N
Sbjct: 354 VINIDEEN 361




273|SequenceR|1370|1361|NETLIRFLLN

>sp|Y1574_METJA|UNCHARACTERIZED ATP-dependent helicase MJ1574|Methanocaldococcus jannaschii (strain

Query: 2 ETLIRFLLN 10
E L+RFLLN
Sbjct: 290 EKLMRFLLN 298


>sp|Y4659_METAC|UPF0201 protein MA_4659|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 LIRFLLN 10
L+RFLLN
Sbjct: 97 LVRFLLN 103


>sp|DNAK_METMZ|CHAPERONE protein DnaK|Methanosarcina mazei (Methanosarcina frisia)

Query: 1 NETLIRFLLN 10
N+TL RF+L+
Sbjct: 425 NKTLGRFILD 434


>sp|DNAK_METMA|CHAPERONE protein DnaK|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NETLIRFLLN 10
N+TL RF+L+
Sbjct: 425 NKTLGRFILD 434


>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NETLIRFL 8
N+T IRFL
Sbjct: 330 NDTSIRFL 337




274|SequenceR|1375|1366|TGECLNETLI

>sp|TF2B_PYROC|TRANSCRIPTION initiation factor IIB|Pyrodictium occultum

Query: 1 TGECLNETLI 10
TGE + ET+I
Sbjct: 36 TGEVVEETVI 45




275|SequenceR|1380|1371|KDLDETGECL

>sp|TRM1_SULAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfolobus acidocaldarius

Query: 1 KDLDETGECL 10
K+LDE EC+
Sbjct: 364 KNLDEIKECI 373


>sp|SYP_THEVO|PROLINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 DETGECL 10
DETG+C+
Sbjct: 441 DETGKCI 447


>sp|Y1724_PYRFU|UPF0292 protein PF1724|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DLDETGECL 10
D DETGE L
Sbjct: 69 DFDETGEKL 77


>sp|LEU1_PYRAB|2-ISOPROPYLMALATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 KDLDETGECL 10
KD+D GE L
Sbjct: 78 KDIDRAGEAL 87


>sp|LEU1_PYRFU|2-ISOPROPYLMALATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KDLDETGECL 10
KD+D GE L
Sbjct: 79 KDIDAAGEAL 88


>sp|QUEC_METTH|7-CYANO-7-DEAZAGUANINE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 DLDETGECL 10
+LD+T ECL
Sbjct: 83 NLDDTVECL 91


>sp|SYP_THEAC|PROLINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DLDETGECL 10
D ETG+C+
Sbjct: 439 DSSETGKCV 447


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 LDETGE 8
LDETGE
Sbjct: 592 LDETGE 597


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 LDETGE 8
LDETGE
Sbjct: 599 LDETGE 604


>sp|Y597_ARCFU|UPF0175 protein AF_0597|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KDLDETGECL 10
KD+D GE L
Sbjct: 78 KDIDVVGELL 87


>sp|HELS_METAR|ATP-DEPENDENT DNA helicase Hel308|Methanocella arvoryzae (strain DSM 22066

Query: 3 LDETGECL 10
L+E G+CL
Sbjct: 245 LEEGGQCL 252




276|SequenceR|1385|1376|VRPKVKDLDE

>sp|PFDA_HALSA|PREFOLDIN subunit alpha|Halobacterium salinarum (strain ATCC 700922

Query: 1 VRPKVKDLDE 10
VR +VKD+DE
Sbjct: 68 VRAEVKDMDE 77


>sp|PFDA_HALS3|PREFOLDIN subunit alpha|Halobacterium salinarum (strain ATCC 29341

Query: 1 VRPKVKDLDE 10
VR +VKD+DE
Sbjct: 68 VRAEVKDMDE 77


>sp|RTCB_AERPE|TRNA-SPLICING ligase RtcB|Aeropyrum pernix (strain ATCC 700893

Query: 1 VRPKVKDL 8
VRPK+KDL
Sbjct: 114 VRPKLKDL 121


>sp|PGMI_THEVO|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Thermoplasma volcanium

Query: 1 VRPKVKDLDE 10
++PK+ D+DE
Sbjct: 137 IKPKIGDVDE 146


>sp|RTCB_METTH|TRNA-SPLICING ligase RtcB|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 VRPKVKDL 8
VRPK+K+L
Sbjct: 114 VRPKIKEL 121


>sp|RTCB_THEKO|TRNA-SPLICING ligase RtcB|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VRPKVKDL 8
VRPK+K+L
Sbjct: 114 VRPKIKEL 121


>sp|AATE_ARCFU|A-TYPE ATP synthase subunit E|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VRPKVKDLDE 10
+R KV+D+DE
Sbjct: 89 LRQKVRDMDE 98


>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VRPKVKDL 8
VRPK+K L
Sbjct: 601 VRPKIKQL 608


>sp|RTCB_PYRAE|TRNA-SPLICING ligase RtcB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VRPKVKDL 8
VRPK+K+L
Sbjct: 114 VRPKLKEL 121


>sp|BSUHB_METJA|FRUCTOSE-1,6-BISPHOSPHATASE/INOSITOL-1-MONOPHOSPHATASE jannaschii (strain ATCC 43067

Query: 1 VRPKVKDLD 9
VRPKV+ +D
Sbjct: 193 VRPKVRAVD 201


>sp|ORNAT_THEKO|ORNITHINE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VRPKVKDL 8
VRP VK+L
Sbjct: 3 VRPNVKEL 10


>sp|SYR_SACS2|ARGININE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RPKVKDLDE 10
R KV++LDE
Sbjct: 215 REKVRELDE 223


>sp|CAS5_HALVD|CRISPR-ASSOCIATED protein Cas5|Haloferax volcanii (strain ATCC 29605

Query: 3 PKVKDLDE 10
P+V+D+DE
Sbjct: 180 PEVQDIDE 187




277|SequenceR|1390|1381|EGTEQVRPKV

>sp|RL15E_METM7|LARGE ribosomal subunit protein eL15|Methanococcus maripaludis (strain C7

Query: 1 EGTEQVRPKV 10
+GTE+VRP V
Sbjct: 177 KGTEKVRPSV 186


>sp|RL15E_METM6|LARGE ribosomal subunit protein eL15|Methanococcus maripaludis (strain C6

Query: 1 EGTEQVRPKV 10
+G E+VRP V
Sbjct: 177 KGAEKVRPSV 186


>sp|RL15E_THEON|LARGE ribosomal subunit protein eL15|Thermococcus onnurineus (strain NA1)

Query: 1 EGTEQVRPKV 10
+G E+VRP V
Sbjct: 177 KGAEKVRPSV 186


>sp|RL15E_THEGJ|LARGE ribosomal subunit protein eL15|Thermococcus gammatolerans (strain

Query: 1 EGTEQVRPKV 10
+G E+VRP V
Sbjct: 177 KGAEKVRPSV 186


>sp|RL15E_HALLT|LARGE ribosomal subunit protein eL15|Halorubrum lacusprofundi (strain

Query: 2 GTEQVRPKV 10
GTE+ RP V
Sbjct: 180 GTEKTRPSV 188


>sp|RL15E_METBU|LARGE ribosomal subunit protein eL15|Methanococcoides burtonii (strain

Query: 2 GTEQVRPKV 10
GTE+ RP V
Sbjct: 180 GTEKTRPSV 188


>sp|RL15E_METMA|LARGE ribosomal subunit protein eL15|Methanosarcina mazei (strain ATCC

Query: 1 EGTEQVRPKV 10
+GTE+ RP +
Sbjct: 179 KGTEKTRPSI 188


>sp|RL15E_METAC|LARGE ribosomal subunit protein eL15|Methanosarcina acetivorans (strain

Query: 1 EGTEQVRPKV 10
+GTE+ RP +
Sbjct: 179 KGTEKTRPSI 188


>sp|SUI1_METKA|PROTEIN translation factor SUI1 homolog|Methanopyrus kandleri (strain

Query: 3 TEQVRP 8
TEQVRP
Sbjct: 34 TEQVRP 39


>sp|RL15E_THEKO|LARGE ribosomal subunit protein eL15|Thermococcus kodakarensis (strain

Query: 1 EGTEQVRPKV 10
+G E+VRP +
Sbjct: 177 KGAEKVRPSI 186


>sp|RL15E_PYRFU|LARGE ribosomal subunit protein eL15|Pyrococcus furiosus (strain ATCC

Query: 1 EGTEQVRPKV 10
+G E+VRP +
Sbjct: 177 KGAEKVRPSI 186


>sp|RL15E_NATPD|LARGE ribosomal subunit protein eL15|Natronomonas pharaonis (strain ATCC

Query: 1 EGTEQVRPKV 10
+GTE RP +
Sbjct: 179 KGTEHTRPSI 188


>sp|DNLI2_HALWD|DNA ligase 2|Haloquadratum walsbyi (strain DSM 16790

Query: 3 TEQVRPKV 10
TEQ+RP V
Sbjct: 543 TEQLRPHV 550


>sp|RL15E_PYRAB|LARGE ribosomal subunit protein eL15|Pyrococcus abyssi (strain GE5 /

Query: 1 EGTEQVRPKV 10
+G E++RP +
Sbjct: 177 KGAEKIRPSI 186


>sp|RL15E_METJA|LARGE ribosomal subunit protein eL15|Methanocaldococcus jannaschii

Query: 2 GTEQVRPKV 10
G E+VRP +
Sbjct: 178 GAEKVRPSI 186


>sp|RL15E_META3|LARGE ribosomal subunit protein eL15|Methanococcus aeolicus (strain ATCC

Query: 1 EGTEQVRPKV 10
+G E+VRP +
Sbjct: 177 KGAEKVRPGI 186


>sp|RS3_METMA|SMALL ribosomal subunit protein uS3|Methanosarcina mazei (strain ATCC

Query: 1 EGTEQVRPKV 10
EG+E+VR +V
Sbjct: 272 EGSEEVRRQV 281




278|SequenceR|1395|1386|LPEKIEGTEQ

>sp|Y1214_METKA|UPF0210 protein MK1214|Methanopyrus kandleri (strain AV19 /

Query: 1 LPEKIEGTEQ 10
+PE IEGTE+
Sbjct: 140 IPEAIEGTER 149


>sp|RASEA_THEKO|ARCHAEOSINE synthase subunit beta|Thermococcus kodakarensis (strain ATCC

Query: 3 EKIEGTE 9
EKIEGTE
Sbjct: 64 EKIEGTE 70


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LPEKIEGTEQ 10
+PEKIE +E+
Sbjct: 280 IPEKIEVSEE 289


>sp|RS3_SULAC|SMALL ribosomal subunit protein uS3|Sulfolobus acidocaldarius (strain

Query: 1 LPEKIEGTEQ 10
L EK+E TEQ
Sbjct: 195 LKEKVEKTEQ 204


>sp|TOP6A_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 LPEKIEGTE 9
LPEK+E E
Sbjct: 343 LPEKLEAVE 351


>sp|DPHB_METMP|DIPHTHINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 EKIEGTEQ 10
EKIEGT Q
Sbjct: 44 EKIEGTLQ 51


>sp|Y666_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0666|Methanocaldococcus

Query: 1 LPEKIEGTEQ 10
+PE +EG E+
Sbjct: 379 IPENVEGYEK 388


>sp|UVRC_HALSA|UVRABC system protein C|Halobacterium salinarum (strain ATCC 700922

Query: 2 PEKIEGTE 9
PE+IEG +
Sbjct: 386 PERIEGVD 393


>sp|UVRC_HALS3|UVRABC system protein C|Halobacterium salinarum (strain ATCC 29341

Query: 2 PEKIEGTE 9
PE+IEG +
Sbjct: 386 PERIEGVD 393


>sp|IF5A_METVS|TRANSLATION initiation factor 5A|Methanococcus vannielii (strain ATCC 35089

Query: 1 LPEKIEGTEQ 10
+PE +EG E
Sbjct: 101 MPEDVEGIES 110


>sp|Y162_ARCFU|UNCHARACTERIZED protein AF_0162|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LPEKIEGTEQ 10
L EK+ GT Q
Sbjct: 48 LKEKVSGTSQ 57


>sp|DPO4_NITMS|DNA polymerase IV|Nitrosopumilus maritimus (strain SCM1)

Query: 2 PEKIEG 7
PEK+EG
Sbjct: 175 PEKVEG 180


>sp|PYRI_METJA|ASPARTATE carbamoyltransferase regulatory chain|Methanocaldococcus jannaschii

Query: 1 LPEKIEGT 8
+P++IEGT
Sbjct: 98 IPDEIEGT 105




279|SequenceR|1400|1391|SISIELPEKI

>sp|G1PDH_HYPBU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Hyperthermus butylicus (strain DSM 5456

Query: 4 IELPEKI 10
IELP+KI
Sbjct: 5 IELPQKI 11


>sp|GCSH_AERPE|PROBABLE glycine cleavage system H|Aeropyrum pernix (strain ATCC 700893

Query: 2 ISIELPEK 9
+ +ELPEK
Sbjct: 53 VGVELPEK 60


>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 2 ISIELPEKI 10
ISI +PEK+
Sbjct: 36 ISINIPEKL 44


>sp|SFSA_PYRCJ|SUGAR fermentation stimulation protein homolog|Pyrobaculum calidifontis

Query: 2 ISIELPEKI 10
+++ELPE++
Sbjct: 67 LAVELPEEL 75


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 ISIELPEKI 10
+ +E+PEKI
Sbjct: 32 LEVEIPEKI 40


>sp|IF2P_SULAC|PROBABLE translation initiation factor IF-2|Sulfolobus acidocaldarius

Query: 3 SIELPEKI 10
IE+PEKI
Sbjct: 425 GIEIPEKI 432


>sp|COBD_META3|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus aeolicus

Query: 5 ELPEKI 10
ELPEKI
Sbjct: 19 ELPEKI 24


>sp|RADA_SULAC|DNA repair and recombination protein|Sulfolobus acidocaldarius (strain

Query: 1 SISIELPEK 9
SIS++LP++
Sbjct: 125 SISVQLPQE 133


>sp|SYK_ARCFU|LYSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SISIELPEKI 10
+I E+PEK+
Sbjct: 401 NIKFEIPEKV 410


>sp|NNR_KORCO|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Korarchaeum cryptofilum (strain

Query: 4 IELPEKI 10
IELPE++
Sbjct: 223 IELPERV 229


>sp|Y581_THEON|UPF0127 protein TON_0581|Thermococcus onnurineus (strain NA1)

Query: 2 ISIELPEKI 10
+ I LPEKI
Sbjct: 126 VKISLPEKI 134


>sp|NTPTH_METAC|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 ELPEKI 10
ELPEKI
Sbjct: 161 ELPEKI 166




280|SequenceR|1405|1396|DHVDQSISIE

>sp|GATD_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermoplasma volcanium (strain ATCC

Query: 1 DHVDQSISI 9
DH+D+ +SI
Sbjct: 271 DHLDEKVSI 279


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 DHVDQSISIE 10
DH+D + S+E
Sbjct: 615 DHIDDAPSVE 624


>sp|Y1428_METJA|TPR repeat-containing protein MJ1428|Methanocaldococcus jannaschii

Query: 1 DHVDQSISI 9
+++D+SISI
Sbjct: 256 EYIDKSISI 264




281|SequenceR|1410|1401|LTNKSDHVDQ

>sp|GGPP_METMA|GERANYLGERANYL diphosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LTNKSDHVD 9
+ N+S HVD
Sbjct: 10 IKNRSSHVD 18


>sp|Y609_METJA|UNCHARACTERIZED protein MJ0609|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LTNKSDHVD 9
+TN S+H++
Sbjct: 207 ITNASEHIE 215




282|SequenceR|1415|1406|EVGTTLTNKS

>sp|PNCB_METBU|NICOTINATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 2 VGTTLTN 8
+GTTLTN
Sbjct: 341 IGTTLTN 347


>sp|PNCB_METAC|NICOTINATE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 2 VGTTLTNKS 10
+GT+LTN S
Sbjct: 342 IGTSLTNNS 350


>sp|ACDD_METJA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanocaldococcus

Query: 1 EVGTTLTNK 9
E+G TLT K
Sbjct: 380 EIGKTLTTK 388


>sp|PNCB_METMA|NICOTINATE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VGTTLTNKS 10
+GT+LTN S
Sbjct: 344 IGTSLTNNS 352


>sp|DDH_HALMT|D-2-HYDROXYACID dehydrogenase|Haloferax mediterranei (strain ATCC 33500

Query: 1 EVGTTLTNKS 10
E GT LTN +
Sbjct: 79 EAGTYLTNST 88


>sp|Y3621_HALWD|PUTATIVE metal transport protein HQ_3621A|Haloquadratum walsbyi (strain DSM

Query: 1 EVGTTLT 7
E+GTT+T
Sbjct: 165 EIGTTVT 171


>sp|DAPAT_METTH|LL-DIAMINOPIMELATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 3 GTTLTNK 9
GTTLT K
Sbjct: 190 GTTLTEK 196




283|SequenceR|1420|1411|VSRIEEVGTT

>sp|FOLD_PYRAR|BIFUNCTIONAL protein FolD|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VSRIEEVGTT 10
V R+EEVG T
Sbjct: 22 VKRLEEVGIT 31


>sp|FOLD_PYRAE|BIFUNCTIONAL protein FolD|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VSRIEEVGTT 10
V R+EEVG T
Sbjct: 22 VKRLEEVGIT 31


>sp|TPIS_ARCFU|TRIOSEPHOSPHATE isomerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VSRIEEVGTT 10
VSR+ E+G T
Sbjct: 108 VSRLRELGLT 117


>sp|TBP_NATPD|TATA-BOX-BINDING protein|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VSRIEEVG 8
VSR+EE+G
Sbjct: 176 VSRLEELG 183


>sp|Y209_ARCFU|UNCHARACTERIZED protein AF_0209|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VSRIEEVG 8
V R+EE+G
Sbjct: 76 VERLEEIG 83




284|SequenceR|1425|1416|MNIIDVSRIE

>sp|RS5_HALSA|SMALL ribosomal subunit protein uS5|Halobacterium salinarum (strain ATCC

Query: 1 MNIIDVSR 8
+NIIDVSR
Sbjct: 106 LNIIDVSR 113


>sp|RS5_HALMA|SMALL ribosomal subunit protein uS5|Haloarcula marismortui (strain ATCC

Query: 1 MNIIDVSR 8
+NIIDVSR
Sbjct: 106 LNIIDVSR 113


>sp|Y071_PYRHO|UPF0215 protein PH0071|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 MNIIDVSRI 9
NI+DVSR+
Sbjct: 85 FNIVDVSRV 93


>sp|RS3_PYRCJ|SMALL ribosomal subunit protein uS3|Pyrobaculum calidifontis (strain

Query: 1 MNIIDVSRIE 10
+++IDVS+IE
Sbjct: 87 IDVIDVSKIE 96


>sp|RS3_PYRAR|SMALL ribosomal subunit protein uS3|Pyrobaculum arsenaticum (strain DSM

Query: 1 MNIIDVSRIE 10
+++IDVS+IE
Sbjct: 87 IDVIDVSKIE 96


>sp|DNLI2_KORCO|DNA ligase 2|Korarchaeum cryptofilum (strain OPF8)

Query: 1 MNIIDVSRI 9
MN IDV++I
Sbjct: 1 MNFIDVAKI 9


>sp|RS3_PYRIL|SMALL ribosomal subunit protein uS3|Pyrobaculum islandicum (strain DSM

Query: 1 MNIIDVSRIE 10
+++IDVS+IE
Sbjct: 87 IDVIDVSKIE 96


>sp|RS3_PYRAE|SMALL ribosomal subunit protein uS3|Pyrobaculum aerophilum (strain ATCC

Query: 1 MNIIDVSRIE 10
+++ID+S+IE
Sbjct: 87 IDVIDISKIE 96


>sp|RPO1C_METS5|DNA-DIRECTED RNA polymerase subunit Rpo1C|Metallosphaera sedula (strain ATCC

Query: 4 IDVSRIE 10
+DVSRIE
Sbjct: 264 VDVSRIE 270


>sp|GATD_METJA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanocaldococcus jannaschii (strain

Query: 1 MNIIDVSRIE 10
MN+ DV R+E
Sbjct: 1 MNVGDVIRVE 10


>sp|TF2B6_HALSA|TRANSCRIPTION initiation factor IIB 6|Halobacterium salinarum (strain ATCC 700922

Query: 3 IIDVSRIE 10
I DVSR+E
Sbjct: 198 IADVSRVE 205




285|SequenceR|1430|1421|EFNLLMNIID

>sp|HPRT_METFV|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothermus fervidus (strain ATCC

Query: 1 EFNLLMNIID 10
E NLLM I+D
Sbjct: 35 EPNLLMEIVD 44


>sp|GATA_METST|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosphaera stadtmanae (strain ATCC

Query: 1 EFNLLMNIID 10
EFN L+N +D
Sbjct: 369 EFNELLNDVD 378


>sp|BACR2_HALMA|BACTERIORHODOPSIN-II marismortui (strain ATCC 43049

Query: 2 FNLLMNII 9
FN+L NII
Sbjct: 177 FNVLRNII 184


>sp|SYC_STAMF|CYSTEINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 EFNLLMNIID 10
EFN ++ ++D
Sbjct: 404 EFNTVLGVLD 413


>sp|KCY_DESA1|CYTIDYLATE kinase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 FNLLMNIID 10
FN++ +IID
Sbjct: 165 FNIIKSIID 173




286|SequenceR|1435|1426|VVEKIEFNLL

>sp|ARLY_PYRAR|ARGININOSUCCINATE lyase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 VEKIEFN 8
VEKI+FN
Sbjct: 340 VEKIKFN 346


>sp|PYRK_METAC|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanosarcina acetivorans

Query: 1 VVEKIEFNL 9
V+EK EF+L
Sbjct: 197 VLEKAEFSL 205


>sp|NIFH1_METTM|NITROGENASE iron protein 1|Methanothermobacter marburgensis (strain ATCC

Query: 1 VVEKIEFN 8
+V+K EFN
Sbjct: 216 IVQKAEFN 223


>sp|NIFH1_METIV|NITROGENASE iron protein 1|Methanobacterium ivanovii

Query: 1 VVEKIEFN 8
+V+K EFN
Sbjct: 216 IVQKAEFN 223


>sp|IF2A_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 3 EKIEFNLL 10
EK+EFN++
Sbjct: 254 EKVEFNVV 261


>sp|NIFH1_METBA|NITROGENASE iron protein 1|Methanosarcina barkeri

Query: 1 VVEKIEFN 8
+V+K EFN
Sbjct: 216 IVQKAEFN 223


>sp|NIFH1_METTH|NITROGENASE iron protein 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 VVEKIEFN 8
+V+K EFN
Sbjct: 216 IVQKAEFN 223


>sp|NIFH1_METTL|NITROGENASE iron protein 1|Methanothermococcus thermolithotrophicus

Query: 1 VVEKIEFN 8
+V+K EFN
Sbjct: 224 IVQKAEFN 231


>sp|Y274_METJA|UNCHARACTERIZED protein MJ0274|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VEKIEFN 8
+EKI+FN
Sbjct: 173 IEKIDFN 179




287|SequenceR|1440|1431|KMLTVVVEKI

>sp|NADE_META3|NH(3)-DEPENDENT NAD(+) synthetase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KMLTVVVEKI 10
K LTV +EKI
Sbjct: 224 KELTVPIEKI 233




288|SequenceR|1445|1436|KKESKKMLTV

>sp|TOP6A_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 KKESKKMLTV 10
K E KKMLT+
Sbjct: 312 KTEIKKMLTI 321




289|SequenceR|1450|1441|HLPRGKKESK

>sp|RF1_PYRAE|PEPTIDE chain release factor subunit|Pyrobaculum aerophilum (strain ATCC

Query: 2 LPRGKKESK 10
+PRG +ESK
Sbjct: 348 VPRGVEESK 356


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 2 LPRGKKESK 10
+PRGKK K
Sbjct: 330 MPRGKKTEK 338


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 HLPRGKKESK 10
H P+GK++++
Sbjct: 859 HKPKGKQDAR 868


>sp|Y1112_PYRHO|UPF0127 protein PH1112|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PRGKKES 9
PRG KES
Sbjct: 96 PRGLKES 102


>sp|HUTU_THEAC|PROBABLE urocanate hydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HLPRGK 6
H PRGK
Sbjct: 9 HAPRGK 14


>sp|HUTU_THEVO|PROBABLE urocanate hydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HLPRGKK 7
H PRG K
Sbjct: 9 HAPRGNK 15




290|SequenceR|1455|1446|LVNLEHLPRG

>sp|TRUB_METKA|PROBABLE tRNA pseudouridine synthase B|Methanopyrus kandleri (strain AV19 /

Query: 4 LEHLPR 9
LEHLPR
Sbjct: 244 LEHLPR 249


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LVNLEHLPRG 10
L EH PRG
Sbjct: 625 LFGREHWPRG 634


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 LVNLEHLPRG 10
L EH PRG
Sbjct: 625 LFGREHWPRG 634


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LVNLEHLPRG 10
L EH PRG
Sbjct: 622 LFKKEHWPRG 631


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 LVNLEHLPRG 10
L EH PRG
Sbjct: 625 LFKKEHWPRG 634


>sp|MVK_THEON|MEVALONATE kinase|Thermococcus onnurineus (strain NA1)

Query: 3 NLEHLP 8
N EHLP
Sbjct: 177 NFEHLP 182


>sp|RADA_METTH|DNA repair and recombination protein|Methanothermobacter

Query: 1 LVNLEHLPRG 10
LV+ HLP G
Sbjct: 289 LVDSPHLPEG 298


>sp|APGM_METTP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanothrix thermoacetophila (strain DSM

Query: 5 EHLPRG 10
+HLPRG
Sbjct: 168 DHLPRG 173


>sp|FER2_HALMA|FERREDOXIN-2 marismortui (strain ATCC 43049

Query: 3 NLEHLP 8
NL+HLP
Sbjct: 114 NLKHLP 119


>sp|RADA_METS3|DNA repair and recombination protein|Methanobrevibacter smithii (strain

Query: 1 LVNLEHLPRG 10
LV+ HLP G
Sbjct: 289 LVDSPHLPEG 298


>sp|RADA_METST|DNA repair and recombination protein|Methanosphaera stadtmanae (strain

Query: 1 LVNLEHLPRG 10
LV+ HLP G
Sbjct: 289 LVDSPHLPEG 298


>sp|CDC6I_HALMA|ORC1-TYPE DNA replication protein 9|Haloarcula marismortui (strain ATCC

Query: 1 LVNLEHLP 8
L+N++H+P
Sbjct: 33 LLNIDHVP 40


>sp|APGM_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM 6242

Query: 5 EHLPRG 10
+H+PRG
Sbjct: 172 DHMPRG 177


>sp|RADA_METS5|DNA repair and recombination protein|Metallosphaera sedula (strain ATCC

Query: 1 LVNLEHLPRG 10
+V+ HLP G
Sbjct: 299 MVDAPHLPEG 308


>sp|RADA_SULAC|DNA repair and recombination protein|Sulfolobus acidocaldarius (strain

Query: 1 LVNLEHLPRG 10
+V+ HLP G
Sbjct: 296 IVDAPHLPEG 305


>sp|RADA_PYRAB|DNA repair and recombination protein|Pyrococcus abyssi (strain GE5 /

Query: 1 LVNLEHLPRG 10
L++ HLP G
Sbjct: 331 LIDAPHLPEG 340


>sp|Y1021_METJA|UNCHARACTERIZED protein MJ1021|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VNLEHLPR 9
VNL+HL R
Sbjct: 52 VNLKHLKR 59


>sp|TRPB2_METTH|TRYPTOPHAN synthase beta chain 2|Methanothermobacter thermautotrophicus

Query: 3 NLEHLPR 9
N+E+LPR
Sbjct: 38 NIENLPR 44


>sp|RADA_PYRFU|DNA repair and recombination protein|Pyrococcus furiosus (strain ATCC

Query: 1 LVNLEHLPRG 10
L++ HLP G
Sbjct: 327 LIDAPHLPEG 336


>sp|RADA_PYRHO|DNA repair and recombination protein|Pyrococcus horikoshii (strain ATCC

Query: 1 LVNLEHLPRG 10
L++ HLP G
Sbjct: 507 LIDAPHLPEG 516


>sp|RL2_METBF|LARGE ribosomal subunit protein uL2|Methanosarcina barkeri (strain

Query: 1 LVNLEHLP 8
++NLEH P
Sbjct: 43 VINLEHDP 50


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 1 LVNLEHLPRG 10
L++ HLP G
Sbjct: 814 LIDSPHLPEG 823


>sp|RADA_SULTO|DNA repair and recombination protein|Sulfurisphaera tokodaii (strain

Query: 1 LVNLEHLPRG 10
+V+ HLP G
Sbjct: 299 IVDAPHLPEG 308


>sp|RADA_ARCFU|DNA repair and recombination protein|Archaeoglobus fulgidus (strain

Query: 1 LVNLEHLPRG 10
L++ HLP G
Sbjct: 304 LIDSPHLPEG 313




291|SequenceR|1460|1451|EMGLQLVNLE

>sp|RL2_DESA1|LARGE ribosomal subunit protein uL2|Desulfurococcus amylolyticus (strain

Query: 3 GLQLVNLE 10
G+Q+VN+E
Sbjct: 103 GMQVVNIE 110


>sp|KCY_SACI6|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 EMGLQLVNL 9
+MGL ++NL
Sbjct: 41 KMGLDIINL 49


>sp|KCY_SACI4|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 EMGLQLVNL 9
+MGL ++NL
Sbjct: 41 KMGLDIINL 49


>sp|KCY_SACI3|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 EMGLQLVNL 9
+MGL ++NL
Sbjct: 41 KMGLDIINL 49


>sp|KCY_SACI2|CYTIDYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 EMGLQLVNL 9
+MGL ++NL
Sbjct: 41 KMGLDIINL 49


>sp|KCY_SACI7|CYTIDYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 EMGLQLVNL 9
+MGL ++NL
Sbjct: 41 KMGLDIINL 49


>sp|KCY_SACI1|CYTIDYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 EMGLQLVNL 9
+MGL ++NL
Sbjct: 41 KMGLDIINL 49


>sp|KCY_SACS2|CYTIDYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 MGLQLVNL 9
MGL ++NL
Sbjct: 42 MGLDIINL 49


>sp|ACDA2_PYRFU|ACETATE--COA ligase [ADP-forming] II subunit|Pyrococcus furiosus (strain ATCC

Query: 3 GLQLVNLE 10
GL+L NLE
Sbjct: 317 GLKLANLE 324




292|SequenceR|1465|1456|TKVKAEMGLQ

>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 2 KVKAEMGL 9
K+KAE+GL
Sbjct: 1014 KIKAELGL 1021


>sp|COFD_METB6|2-PHOSPHO-L-LACTATE transferase|Methanoregula boonei (strain DSM 21154

Query: 1 TKVKAEMGL 9
T+VK E+GL
Sbjct: 137 TRVKTELGL 145


>sp|Y1713_ARCFU|UNCHARACTERIZED protein AF_1713|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KVKAEMGL 9
K+KAE+GL
Sbjct: 52 KLKAELGL 59


>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 2 KVKAEMGL 9
KV+ EMGL
Sbjct: 651 KVREEMGL 658


>sp|FBPAP_METS5|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Metallosphaera sedula (strain ATCC 51363

Query: 1 TKVKAEMGL 9
TKV E+GL
Sbjct: 81 TKVSKELGL 89




293|SequenceR|1470|1461|ATMDYTKVKA

***** No hits found ******


294|SequenceR|1475|1466|KLYAKATMDY

>sp|LCAO_UNCAR|LONG-CHAIN alcohol oxidase|Uncultured marine euryarchaeote

Query: 1 KLYAKATMDY 10
+LY TMDY
Sbjct: 240 RLYWLGTMDY 249


>sp|FEN_THEON|FLAP endonuclease 1|Thermococcus onnurineus (strain NA1)

Query: 1 KLYAKATMDY 10
K+YA A+ DY
Sbjct: 165 KVYASASQDY 174


>sp|PROB_METMA|GLUTAMATE 5-kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KLYAKATMDY 10
K++AK DY
Sbjct: 335 KIFAKGITDY 344


>sp|FEN_THEGJ|FLAP endonuclease 1|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KLYAKATMDY 10
++YA A+ DY
Sbjct: 165 RVYASASQDY 174


>sp|NADA_SACS2|QUINOLINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LYAKATMDY 10
+YAKA DY
Sbjct: 118 IYAKALADY 126




295|SequenceR|1480|1471|QMSIKKLYAK

>sp|THRC_METAC|THREONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QMSIKKLYAK 10
++ IKKLY K
Sbjct: 84 KIGIKKLYVK 93


>sp|RS5_METS5|SMALL ribosomal subunit protein uS5|Metallosphaera sedula (strain ATCC

Query: 3 SIKKLYAK 10
SIK+LYA+
Sbjct: 30 SIKELYAR 37




296|SequenceR|1485|1476|TFDFCQMSIK

>sp|KORB_METJA|2-OXOGLUTARATE synthase subunit KorB|Methanocaldococcus jannaschii (strain ATCC

Query: 1 TFDFCQMSI 9
T D C+M+I
Sbjct: 153 TMDLCKMAI 161


>sp|QUEC_METBU|7-CYANO-7-DEAZAGUANINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 TFDFCQMSIK 10
TFD+ Q S+K
Sbjct: 31 TFDYGQRSVK 40


>sp|COFG_METS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 FDFCQMSIK 10
FD C+M+++
Sbjct: 100 FDICKMTLE 108


>sp|Y1626_METJA|UNCHARACTERIZED protein MJ1626|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FCQMSIK 10
FC +SIK
Sbjct: 22 FCSLSIK 28


>sp|QUEC_METST|7-CYANO-7-DEAZAGUANINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 TFDFCQMSIK 10
TF++ Q SIK
Sbjct: 32 TFNYGQQSIK 41




297|SequenceR|1490|1481|EGKSDTFDFC

>sp|GYRB_ARCFU|DNA gyrase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EGKSDTFDF 9
EGK +TF F
Sbjct: 216 EGKEETFHF 224


>sp|RF1_METJA|PEPTIDE chain release factor subunit|Methanocaldococcus jannaschii (strain

Query: 5 DTFDFC 10
DTFD C
Sbjct: 249 DTFDLC 254


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 1 EGKSDTFDFC 10
EG +D FD C
Sbjct: 419 EGLADLFDRC 428


>sp|RF1_METMP|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain DSM

Query: 5 DTFDFC 10
DTFD C
Sbjct: 249 DTFDLC 254


>sp|RF1_METVS|PEPTIDE chain release factor subunit|Methanococcus vannielii (strain ATCC

Query: 5 DTFDFC 10
DTFD C
Sbjct: 249 DTFDLC 254


>sp|RF1_METM7|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C7 /

Query: 5 DTFDFC 10
DTFD C
Sbjct: 249 DTFDLC 254


>sp|RF1_METM6|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C6 /

Query: 5 DTFDFC 10
DTFD C
Sbjct: 249 DTFDLC 254


>sp|RF1_METM5|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C5 /

Query: 5 DTFDFC 10
DTFD C
Sbjct: 249 DTFDLC 254


>sp|EF1A_CENSY|ELONGATION factor 1-alpha|Cenarchaeum symbiosum (strain A)

Query: 2 GKSDTFDF 9
GK DTF +
Sbjct: 53 GKGDTFKY 60




298|SequenceR|1495|1486|IIHLPEGKSD

>sp|HIS6_METPE|IMIDAZOLE glycerol phosphate synthase subunit|Methanosphaerula palustris

Query: 1 IIHLPEGKS 9
+IHLP+G +
Sbjct: 144 VIHLPDGTT 152


>sp|DUT_METMA|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanosarcina

Query: 2 IHLPEG 7
IHLPEG
Sbjct: 74 IHLPEG 79


>sp|SYP_NATPD|PROLINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IIHLPEGKSD 10
++H P+G+SD
Sbjct: 364 LVHRPDGESD 373


>sp|SYR_METKA|ARGININE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 IHLPEG 7
IHLPEG
Sbjct: 389 IHLPEG 394


>sp|GCSPA_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 2 IHLPEGKSD 10
++LPEGKS+
Sbjct: 40 LNLPEGKSE 48


>sp|RADA_METST|DNA repair and recombination protein|Methanosphaera stadtmanae (strain

Query: 3 HLPEGKS 9
HLPEG+S
Sbjct: 294 HLPEGES 300


>sp|GCSPA_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 2 IHLPEGKSD 10
++LPEGKS+
Sbjct: 40 LNLPEGKSE 48


>sp|RQCH_METJA|ARCHAEAL Rqc2 homolog aRqcH|Methanocaldococcus jannaschii (strain ATCC

Query: 2 IHLPEGKS 9
IH+PEG S
Sbjct: 43 IHVPEGGS 50


>sp|GCSPA_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 3 HLPEGKSD 10
+LPEGKS+
Sbjct: 40 NLPEGKSE 47


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IHLPEGKSD 10
IH P+GK D
Sbjct: 858 IHKPKGKQD 866


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 3 HLPEGKS 9
HLPEG++
Sbjct: 819 HLPEGEA 825


>sp|RADA_AERPE|DNA repair and recombination protein|Aeropyrum pernix (strain ATCC

Query: 3 HLPEGKS 9
HLPEG++
Sbjct: 300 HLPEGET 306


>sp|IORB_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorB|Thermococcus kodakarensis (strain

Query: 4 LPEGKSD 10
+PEGK+D
Sbjct: 64 VPEGKAD 70


>sp|IORB_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorB|Pyrococcus abyssi (strain GE5 /

Query: 4 LPEGKSD 10
+PEGK+D
Sbjct: 64 VPEGKAD 70


>sp|RADA_AERPX|DNA repair and recombination protein|Aeropyrum pernix

Query: 3 HLPEGKS 9
HLPEG++
Sbjct: 300 HLPEGET 306


>sp|SYP_HALWD|PROLINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IIHLPEGKS 9
+IH P+G+S
Sbjct: 368 LIHRPDGES 376


>sp|IORB_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorB|Pyrococcus horikoshii (strain ATCC

Query: 4 LPEGKSD 10
+PEGK+D
Sbjct: 64 VPEGKAD 70


>sp|RADA_METTH|DNA repair and recombination protein|Methanothermobacter

Query: 3 HLPEGK 8
HLPEG+
Sbjct: 294 HLPEGE 299


>sp|DUT_METBF|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanosarcina

Query: 2 IHLPEG 7
IHLP+G
Sbjct: 74 IHLPKG 79


>sp|RADA_PYRFU|DNA repair and recombination protein|Pyrococcus furiosus (strain ATCC

Query: 3 HLPEGKS 9
HLPEG++
Sbjct: 332 HLPEGEA 338


>sp|RADA_PYRAB|DNA repair and recombination protein|Pyrococcus abyssi (strain GE5 /

Query: 3 HLPEGKS 9
HLPEG++
Sbjct: 336 HLPEGEA 342


>sp|RADA_PYRHO|DNA repair and recombination protein|Pyrococcus horikoshii (strain ATCC

Query: 3 HLPEGKS 9
HLPEG++
Sbjct: 512 HLPEGEA 518


>sp|RADA_DESA1|DNA repair and recombination protein|Desulfurococcus amylolyticus

Query: 3 HLPEGK 8
HLPEG+
Sbjct: 307 HLPEGE 312


>sp|RADA_ARCFU|DNA repair and recombination protein|Archaeoglobus fulgidus (strain

Query: 3 HLPEGKS 9
HLPEG++
Sbjct: 309 HLPEGEA 315


>sp|RADA_DESAM|DNA repair and recombination protein|Desulfurococcus amylolyticus

Query: 3 HLPEGK 8
HLPEG+
Sbjct: 307 HLPEGE 312


>sp|DTDA_METHJ|D-AMINOACYL-TRNA deacylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 IIHLPEG 7
IIH PEG
Sbjct: 117 IIHAPEG 123


>sp|RADA_SULAC|DNA repair and recombination protein|Sulfolobus acidocaldarius (strain

Query: 3 HLPEGK 8
HLPEG+
Sbjct: 301 HLPEGE 306


>sp|SYR_NATPD|ARGININE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 IHLPEGK 8
++LPEGK
Sbjct: 372 VNLPEGK 378


>sp|RADA_METS5|DNA repair and recombination protein|Metallosphaera sedula (strain ATCC

Query: 3 HLPEGK 8
HLPEG+
Sbjct: 304 HLPEGE 309


>sp|ARGDC_SACS2|ARGININE decarboxylase proenzyme|Saccharolobus solfataricus (strain ATCC

Query: 2 IHLPEGKSD 10
I+ PEGK D
Sbjct: 10 INSPEGKED 18


>sp|DUT_METAC|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanosarcina

Query: 2 IHLPEG 7
IHLP+G
Sbjct: 74 IHLPKG 79


>sp|GCSPA_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 3 HLPEGKSD 10
+LPEG+S+
Sbjct: 40 NLPEGRSE 47


>sp|RNJ_PYRAB|RIBONUCLEASE J|Pyrococcus abyssi (strain GE5 /

Query: 1 IIHLPEG 7
+IH PEG
Sbjct: 164 VIHTPEG 170


>sp|RADA_SACS2|DNA repair and recombination protein|Saccharolobus solfataricus (strain

Query: 3 HLPEGK 8
HLPEG+
Sbjct: 304 HLPEGE 309


>sp|RADA_SACI7|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 3 HLPEGK 8
HLPEG+
Sbjct: 304 HLPEGE 309


>sp|RADA_SACI6|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 3 HLPEGK 8
HLPEG+
Sbjct: 304 HLPEGE 309


>sp|RADA_SACI4|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 3 HLPEGK 8
HLPEG+
Sbjct: 304 HLPEGE 309


>sp|RADA_SACI3|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 3 HLPEGK 8
HLPEG+
Sbjct: 304 HLPEGE 309


>sp|RADA_SACI2|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 3 HLPEGK 8
HLPEG+
Sbjct: 304 HLPEGE 309


>sp|RADA_SACI1|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 3 HLPEGK 8
HLPEG+
Sbjct: 304 HLPEGE 309


>sp|RADA_SULTO|DNA repair and recombination protein|Sulfurisphaera tokodaii (strain

Query: 3 HLPEGK 8
HLPEG+
Sbjct: 304 HLPEGE 309


>sp|RADA_METS3|DNA repair and recombination protein|Methanobrevibacter smithii (strain

Query: 3 HLPEGK 8
HLPEG+
Sbjct: 294 HLPEGE 299


>sp|DAPAT_METST|LL-DIAMINOPIMELATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 IHLPEGKSD 10
I+ PEGK +
Sbjct: 306 IYTPEGKKE 314


>sp|HUTU_THEAC|PROBABLE urocanate hydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IHLPEGKS 9
IH P GK+
Sbjct: 8 IHAPRGKT 15


>sp|RF1_HALMA|PEPTIDE chain release factor subunit|Haloarcula marismortui (strain ATCC

Query: 2 IHLPEGK 8
I++PEGK
Sbjct: 37 IYIPEGK 43


>sp|RL2_PYRIL|LARGE ribosomal subunit protein uL2|Pyrobaculum islandicum (strain DSM

Query: 1 IIHLPEGK 8
II LP GK
Sbjct: 139 IIRLPSGK 146


>sp|GCSPA_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 3 HLPEGKSD 10
++PEGKS+
Sbjct: 40 NVPEGKSE 47


>sp|SYP_HALSA|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 IIHLPEGKS 9
++H P+G+S
Sbjct: 367 VVHRPDGES 375


>sp|SYP_HALS3|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 IIHLPEGKS 9
++H P+G+S
Sbjct: 367 VVHRPDGES 375


>sp|RL2_IGNH4|LARGE ribosomal subunit protein uL2|Ignicoccus hospitalis (strain KIN4/I

Query: 1 IIHLPEGK 8
II LP GK
Sbjct: 141 IIQLPSGK 148


>sp|PUR1_METTH|AMIDOPHOSPHORIBOSYLTRANSFERASE thermautotrophicus (strain ATCC 29096

Query: 1 IIHLPEGKS 9
I+HL GKS
Sbjct: 228 ILHLNRGKS 236


>sp|METK_HYPBU|S-ADENOSYLMETHIONINE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 2 IHLPEGKSD 10
+ LP+GK++
Sbjct: 97 VRLPDGKTE 105


>sp|PYRG_METLZ|CTP synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 IHLPEGKSD 10
+HL GK+D
Sbjct: 269 LHLESGKTD 277




299|SequenceR|1500|1491|VNSSNIIHLP

>sp|Y638_METJA|UNCHARACTERIZED protein MJ0638|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 SNIIHLP 10
+NI+HLP
Sbjct: 91 ANILHLP 97


>sp|SYFB_ARCFU|PHENYLALANINE--TRNA ligase beta subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VNSSNIIHL 9
VNS N +HL
Sbjct: 448 VNSKNRLHL 456


>sp|SYFB_METBU|PHENYLALANINE--TRNA ligase beta subunit|Methanococcoides burtonii (strain DSM 6242

Query: 1 VNSSNIIHL 9
VNS N +HL
Sbjct: 449 VNSKNRLHL 457




300|SequenceR|1505|1496|LPEDTVNSSN

>sp|IDH_ARCFU|ISOCITRATE dehydrogenase [NADP]|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LPEDTVNS 8
LP+DT+N+
Sbjct: 80 LPDDTLNA 87


>sp|HCP_METTH|HYDROXYLAMINE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LPEDTV 6
LPEDTV
Sbjct: 300 LPEDTV 305


>sp|NADM_METMJ|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PEDTVNSSN 10
P DTV SSN
Sbjct: 92 PFDTVYSSN 100


>sp|AKSF_METJA|HOMOISOCITRATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LPEDTVNSS 9
LPEDT+ +
Sbjct: 49 LPEDTIEKA 57


>sp|IDH_HALVD|ISOCITRATE dehydrogenase [NADP]|Haloferax volcanii (strain ATCC 29605

Query: 1 LPEDTVNS 8
LPEDTV++
Sbjct: 82 LPEDTVSA 89


>sp|RS6E_HYPBU|SMALL ribosomal subunit protein eS6|Hyperthermus butylicus (strain DSM

Query: 1 LPEDTVNSS 9
+PEDTV+ S
Sbjct: 85 VPEDTVHVS 93


>sp|TBP1_HALVD|TATA-BOX-BINDING protein 1|Haloferax volcanii (strain ATCC 29605

Query: 2 PEDTVNSSN 10
P+DT+N N
Sbjct: 4 PKDTINIEN 12




301|SequenceR|1510|1501|LLMKLLPEDT

>sp|LYSJ_AERPE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 4 KLLPEDT 10
KL+PEDT
Sbjct: 166 KLVPEDT 172


>sp|CBID_METST|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 LMKLLPED 9
+MK LPED
Sbjct: 145 IMKYLPED 152


>sp|Y2236_ARCFU|UNCHARACTERIZED protein AF_2236|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 KLLPED 9
KLLPED
Sbjct: 107 KLLPED 112


>sp|EF1B_STAMF|ELONGATION factor 1-beta|Staphylothermus marinus (strain ATCC 43588

Query: 1 LLMKLLPED 9
+L+K+LPED
Sbjct: 6 VLLKVLPED 14


>sp|PURL_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LLMKLLPED 9
+L+++LPED
Sbjct: 337 MLVEVLPED 345


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 3 MKLLPED 9
MK++PED
Sbjct: 740 MKIVPED 746


>sp|SPH2_HALSA|SMC-LIKE protein Sph2|Halobacterium salinarum (strain ATCC 700922

Query: 1 LLMKLLPED 9
L++ LLPED
Sbjct: 639 LIVALLPED 647


>sp|SPH2_HALS3|SMC-LIKE protein Sph2|Halobacterium salinarum (strain ATCC 29341

Query: 1 LLMKLLPED 9
L++ LLPED
Sbjct: 639 LIVALLPED 647


>sp|THIL_METJA|THIAMINE-MONOPHOSPHATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LMKLLPED 9
+ KL+PED
Sbjct: 240 IFKLIPED 247


>sp|TRUD_THEGJ|PROBABLE tRNA pseudouridine synthase D|Thermococcus gammatolerans (strain

Query: 3 MKLLPED 9
+K+LPED
Sbjct: 23 IKILPED 29


>sp|MDH_METAC|MALATE dehydrogenase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LMKLLPEDT 10
L +LLPE+T
Sbjct: 192 LPELLPEET 200


>sp|EF1B_THEAC|ELONGATION factor 1-beta|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 MKLLPEDT 10
+K+LP+DT
Sbjct: 8 LKILPKDT 15


>sp|Y405_METJA|UNCHARACTERIZED protein MJ0405|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LMKLLPED 9
L K LPED
Sbjct: 120 LYKFLPED 127




302|SequenceR|1515|1506|SDAKTLLMKL

***** No hits found ******


303|SequenceR|1520|1511|FEPGDSDAKT

>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain Fusaro

Query: 1 FEPGDSDAKT 10
F+PGDS T
Sbjct: 853 FDPGDSGGNT 862


>sp|SYT_PYRNV|THREONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 FEPGDSDAK 9
F+PGDS A+
Sbjct: 135 FKPGDSRAE 143


>sp|Y1032_METJA|UNCHARACTERIZED protein MJ1032|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EPGDSD 7
+PGDSD
Sbjct: 47 DPGDSD 52


>sp|NARC_HALMT|PROBABLE respiratory nitrate reductase subunit|Haloferax mediterranei

Query: 1 FEPGDSDAK 9
FEP SD K
Sbjct: 69 FEPSTSDVK 77


>sp|RF1_METBU|PEPTIDE chain release factor subunit|Methanococcoides burtonii (strain DSM

Query: 1 FEPGDSDAKT 10
F+PGDS + T
Sbjct: 342 FKPGDSSSPT 351


>sp|RRP42_AERPE|EXOSOME complex component Rrp42|Aeropyrum pernix (strain ATCC 700893

Query: 1 FEPGDSDAKT 10
+ PGD D KT
Sbjct: 27 WRPGDRDLKT 36


>sp|Y906_METJA|UNCHARACTERIZED protein MJ0906|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FEPGDSDAK 9
FE GD D+K
Sbjct: 17 FEIGDDDSK 25


>sp|COFH_METMJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanoculleus marisnigri (strain

Query: 2 EPGDSDA 8
+PGD+DA
Sbjct: 82 KPGDADA 88


>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 FEPGDSDA 8
FEPG +DA
Sbjct: 556 FEPGRTDA 563


>sp|KATG_HALSA|CATALASE-PEROXIDASE salinarum (strain ATCC 700922

Query: 1 FEPGDSDA 8
FEPG +DA
Sbjct: 546 FEPGRTDA 553


>sp|KATG_HALS3|CATALASE-PEROXIDASE salinarum (strain ATCC 29341

Query: 1 FEPGDSDA 8
FEPG +DA
Sbjct: 546 FEPGRTDA 553


>sp|KATG_NATPD|CATALASE-PEROXIDASE pharaonis (strain ATCC 35678

Query: 1 FEPGDSDA 8
FEPG +DA
Sbjct: 539 FEPGRTDA 546


>sp|RL30E_METTP|LARGE ribosomal subunit protein eL30|Methanothrix thermoacetophila

Query: 2 EPGDSD 7
EPGDS+
Sbjct: 84 EPGDSE 89


>sp|JAMM1_HALVD|DESAMPYLASE volcanii (strain ATCC 29605

Query: 4 GDSDAKT 10
GDSDA+T
Sbjct: 38 GDSDART 44


>sp|ARGD_METTH|ACETYLORNITHINE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 FEPGD 5
FEPGD
Sbjct: 267 FEPGD 271


>sp|PURO_METS3|IMP cyclohydrolase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 FEPGDSDAKT 10
++P D DAKT
Sbjct: 160 YDPVDFDAKT 169


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 FEPGDSDAK 9
F+PGD A+
Sbjct: 661 FQPGDHSAE 669


>sp|RL21_THEAC|LARGE ribosomal subunit protein eL21|Thermoplasma acidophilum (strain

Query: 1 FEPGD 5
FEPGD
Sbjct: 35 FEPGD 39




304|SequenceR|1525|1516|DHITKFEPGD

>sp|DNAG_AERPE|DNA primase DnaG|Aeropyrum pernix (strain ATCC 700893

Query: 1 DHITKFEPG 9
D+I+K EPG
Sbjct: 359 DYISKSEPG 367


>sp|Y643_PYRHO|UNCHARACTERIZED protein PH0643|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DHITKFEPGD 10
HI EPGD
Sbjct: 180 SHIMTLEPGD 189


>sp|PMDHL_AERPE|PHOSPHOMEVALONATE dehydratase large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 HITKFEPGD 10
HIT PGD
Sbjct: 253 HITGVTPGD 261


>sp|LEUD2_ARCFU|3-ISOPROPYLMALATE dehydratase small subunit 2|Archaeoglobus fulgidus (strain ATCC

Query: 1 DHITKFEPGD 10
D + KF PGD
Sbjct: 45 DFMKKFRPGD 54


>sp|PELO_METTP|PROTEIN pelota homolog|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 TKFEPGD 10
T+FEPG+
Sbjct: 321 TEFEPGE 327


>sp|ARLY_METHJ|ARGININOSUCCINATE lyase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DHITKFEPG 9
DHIT PG
Sbjct: 147 DHITTVMPG 155


>sp|PELO_METMJ|PROTEIN pelota homolog|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 TKFEPGD 10
T+FEPG+
Sbjct: 318 TEFEPGE 324


>sp|FTSY_HALVD|SIGNAL recognition particle receptor FtsY|Haloferax volcanii (strain ATCC

Query: 1 DHITKFEP 8
DHI KF+P
Sbjct: 437 DHIEKFDP 444


>sp|SQRD_ACIAM|SULFIDE-QUINONE reductase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 HITKFEPGD 10
H+T F PG+
Sbjct: 203 HVTVFSPGE 211


>sp|PELO_METB6|PROTEIN pelota homolog|Methanoregula boonei (strain DSM 21154

Query: 4 TKFEPGD 10
T+FEPG+
Sbjct: 318 TEFEPGE 324


>sp|RS4E_SULAC|SMALL ribosomal subunit protein eS4|Sulfolobus acidocaldarius (strain

Query: 2 HITKFE 7
HIT+FE
Sbjct: 3 HITRFE 8


>sp|PELO_METLZ|PROTEIN pelota homolog|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 TKFEPG 9
T+FEPG
Sbjct: 320 TEFEPG 325


>sp|RS4E_SACS2|SMALL ribosomal subunit protein eS4|Saccharolobus solfataricus

Query: 2 HITKFE 7
HIT+FE
Sbjct: 3 HITRFE 8


>sp|SYR_METAR|ARGININE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DHITKFEPG 9
DH+ + +PG
Sbjct: 171 DHLDRIKPG 179


>sp|RS4E_SULTO|SMALL ribosomal subunit protein eS4|Sulfurisphaera tokodaii (strain

Query: 2 HITKFE 7
HIT+FE
Sbjct: 3 HITRFE 8


>sp|PELO_ARCFU|PROTEIN pelota homolog|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 TKFEPG 9
T+FEPG
Sbjct: 320 TEFEPG 325


>sp|DCDB_METPE|DCTP deaminase, dUMP-forming|Methanosphaerula palustris (strain ATCC

Query: 1 DHITKFEPGD 10
DH + PGD
Sbjct: 38 DHFVWYVPGD 47


>sp|FKBPS_METTL|SHORT-TYPE peptidyl-prolyl cis-trans isomerase|Methanothermococcus

Query: 1 DHITKFEPGD 10
D+I K E GD
Sbjct: 11 DYIGKLESGD 20


>sp|RS4E_SACI7|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 2 HITKFE 7
HIT+FE
Sbjct: 3 HITRFE 8


>sp|RS4E_SACI6|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 2 HITKFE 7
HIT+FE
Sbjct: 3 HITRFE 8


>sp|RS4E_SACI4|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 2 HITKFE 7
HIT+FE
Sbjct: 3 HITRFE 8


>sp|RS4E_SACI3|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 2 HITKFE 7
HIT+FE
Sbjct: 3 HITRFE 8


>sp|RS4E_SACI2|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 2 HITKFE 7
HIT+FE
Sbjct: 3 HITRFE 8


>sp|RS4E_SACI1|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 2 HITKFE 7
HIT+FE
Sbjct: 3 HITRFE 8


>sp|RL21_THEAC|LARGE ribosomal subunit protein eL21|Thermoplasma acidophilum (strain

Query: 3 ITKFEPGD 10
+ +FEPGD
Sbjct: 32 MQEFEPGD 39


>sp|SYE_PYRFU|GLUTAMATE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HITKFEPG 9
+ KFEPG
Sbjct: 446 RVLKFEPG 453


>sp|CPGS_PYRHO|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus horikoshii (strain

Query: 2 HITKFEP 8
H+T+F P
Sbjct: 311 HLTRFSP 317


>sp|PELO_METAR|PROTEIN pelota homolog|Methanocella arvoryzae (strain DSM 22066

Query: 4 TKFEPG 9
T+FEPG
Sbjct: 332 TEFEPG 337


>sp|PELO_METBU|PROTEIN pelota homolog|Methanococcoides burtonii (strain DSM 6242

Query: 4 TKFEPG 9
T+FEPG
Sbjct: 325 TEFEPG 330


>sp|AATB_METTH|A-TYPE ATP synthase subunit B|Methanothermobacter thermautotrophicus

Query: 1 DHITKFEPG 9
+HI K+ PG
Sbjct: 453 EHIPKYLPG 461


>sp|SYS2_METKA|TYPE-2 serine--tRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 DHITKFEPG 9
+ +TK EPG
Sbjct: 171 ERVTKVEPG 179


>sp|ATGT_METJA|TRNA-GUANINE(15) transglycosylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DHITKFEP 8
D+I KF+P
Sbjct: 356 DYIEKFDP 363




305|SequenceR|1530|1521|RQKTSDHITK

>sp|TIAS_THEGJ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus gammatolerans

Query: 2 QKTSDHIT 9
Q T DH+T
Sbjct: 248 QNTDDHLT 255


>sp|CAS1B_METRM|CRISPR-ASSOCIATED protein Cas1 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 RQKTSDHITK 10
R+K S+HI K
Sbjct: 134 REKVSEHIGK 143




306|SequenceR|1535|1526|FSVKLRQKTS

>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FSVKLRQ 7
FSV+LRQ
Sbjct: 690 FSVRLRQ 696


>sp|HEM1_METLZ|GLUTAMYL-TRNA reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 VKLRQKTS 10
V +RQKTS
Sbjct: 140 VSIRQKTS 147




307|SequenceR|1540|1531|LDLSAFSVKL

>sp|TRUD_ARCFU|PROBABLE tRNA pseudouridine synthase D|Archaeoglobus fulgidus (strain ATCC

Query: 1 LDLSAFSVK 9
LDLS+F K
Sbjct: 351 LDLSSFKTK 359


>sp|PCNA_METJA|DNA polymerase sliding clamp|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LDLSAFSVKL 10
LD+SA SVK+
Sbjct: 115 LDISASSVKV 124




308|SequenceR|1545|1536|ELHLVLDLSA

>sp|RRP41_THEAC|EXOSOME complex component Rrp41|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 HLVLDLS 9
H+VLDLS
Sbjct: 171 HMVLDLS 177


>sp|RRP41_THEVO|EXOSOME complex component Rrp41|Thermoplasma volcanium (strain ATCC 51530

Query: 3 HLVLDLS 9
H+VLDLS
Sbjct: 171 HIVLDLS 177


>sp|RL21_METLZ|LARGE ribosomal subunit protein eL21|Methanocorpusculum labreanum

Query: 1 ELHLVLDLS 9
++HLVLD S
Sbjct: 39 KVHLVLDSS 47




309|SequenceR|1550|1541|FSLLAELHLV

>sp|HMPTM_METJA|7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN dimethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FSLLAELH 8
+S LAELH
Sbjct: 423 YSALAELH 430


>sp|RIO1_METJA|RIO-TYPE serine/threonine-protein kinase Rio1|Methanocaldococcus

Query: 1 FSLLAELHL 9
FSLLA HL
Sbjct: 67 FSLLAGKHL 75




310|SequenceR|1555|1546|SLFDMFSLLA

***** No hits found ******


311|SequenceR|1560|1551|FPAASSLFDM

>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 FPAASSLFDM 10
+PA +LFD+
Sbjct: 334 YPAVLNLFDV 343




312|SequenceR|1565|1556|SSPESFPAAS

>sp|COAD_METBF|PHOSPHOPANTETHEINE adenylyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 SPESFPAA 9
SPE++P A
Sbjct: 96 SPETYPVA 103


>sp|COAD_METAC|PHOSPHOPANTETHEINE adenylyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 SPESFPAA 9
SPE++P A
Sbjct: 96 SPETYPVA 103


>sp|COAD_METMA|PHOSPHOPANTETHEINE adenylyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SPESFPAA 9
SPE++P A
Sbjct: 96 SPETYPVA 103




313|SequenceR|1570|1561|SEKESSSPES

>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SEKESSSPE 9
+EKE SPE
Sbjct: 59 AEKEGKSPE 67




314|SequenceR|1575|1566|LPKLESEKES

>sp|ADHS_METTH|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PKLESEKE 9
PK+E+E+E
Sbjct: 203 PKIETEEE 210


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 LPKLESEK 8
LPK E+EK
Sbjct: 667 LPKFEAEK 674


>sp|PRIL_METTH|DNA primase large subunit PriL|Methanothermobacter thermautotrophicus

Query: 1 LPKLESEKES 10
+P+LE+E ES
Sbjct: 375 MPELENEGES 384


>sp|ADHS_METM7|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus maripaludis (strain C7 /

Query: 2 PKLESEKE 9
PK+E EK+
Sbjct: 157 PKIEDEKD 164


>sp|SMC_PYRFU|CHROMOSOME partition protein Smc|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KLESEKES 10
KLE+EKES
Sbjct: 990 KLEAEKES 997


>sp|PYRC_METAC|DIHYDROOROTASE acetivorans (strain ATCC 35395

Query: 2 PKLESEKE 9
P LESEK+
Sbjct: 316 PHLESEKD 323




315|SequenceR|1580|1571|RSEGVLPKLE

>sp|TRPB1_THEKO|TRYPTOPHAN synthase beta chain 1|Thermococcus kodakarensis (strain ATCC

Query: 1 RSEGVLPKLE 10
R+EG+LP LE
Sbjct: 338 RTEGILPALE 347


>sp|TRPB_METVO|TRYPTOPHAN synthase beta chain|Methanococcus voltae

Query: 1 RSEGVLPKLE 10
R+EG++P LE
Sbjct: 355 RTEGIIPALE 364


>sp|TRPB_HALSA|TRYPTOPHAN synthase beta chain|Halobacterium salinarum (strain ATCC 700922

Query: 1 RSEGVLPKLE 10
R EGV+P LE
Sbjct: 369 RDEGVIPALE 378


>sp|TRPB_HALS3|TRYPTOPHAN synthase beta chain|Halobacterium salinarum (strain ATCC 29341

Query: 1 RSEGVLPKLE 10
R EGV+P LE
Sbjct: 369 RDEGVIPALE 378


>sp|TRPB1_PYRAB|TRYPTOPHAN synthase beta chain 1|Pyrococcus abyssi (strain GE5 /

Query: 1 RSEGVLPKLE 10
R+EG++P LE
Sbjct: 336 RTEGIIPALE 345


>sp|TRPB_METLZ|TRYPTOPHAN synthase beta chain|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 RSEGVLPKLE 10
R+EG++P LE
Sbjct: 339 RTEGIIPALE 348


>sp|TRPB1_PYRFU|TRYPTOPHAN synthase beta chain 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RSEGVLPKLE 10
R+EG++P LE
Sbjct: 336 RTEGIIPALE 345


>sp|TRPB_PYRIL|TRYPTOPHAN synthase beta chain|Pyrobaculum islandicum (strain DSM 4184

Query: 1 RSEGVLPKLE 10
RSEGVLP E
Sbjct: 360 RSEGVLPAPE 369


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 RSEGVLPKLE 10
R EGV+P++E
Sbjct: 383 RFEGVIPRME 392


>sp|ARGB_METPE|ACETYLGLUTAMATE kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 SEGVLPKLE 10
SEG++PK+E
Sbjct: 241 SEGMIPKVE 249


>sp|TYW32_THEKO|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 RSEGVLPKLE 10
RS+G LP+LE
Sbjct: 171 RSKGRLPRLE 180


>sp|NPD1_PYRAE|NAD-DEPENDENT protein deacetylase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RSEGVLPKL 9
R+E VLPKL
Sbjct: 237 RAEEVLPKL 245


>sp|TRPB_METKA|TRYPTOPHAN synthase beta chain|Methanopyrus kandleri (strain AV19 /

Query: 2 SEGVLPKLE 10
+EG+LP LE
Sbjct: 344 TEGILPALE 352


>sp|APGM1_METJA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanocaldococcus jannaschii (strain

Query: 1 RSEGVLPKLE 10
R GV+PK+E
Sbjct: 226 RGAGVVPKIE 235


>sp|TRPB_META3|TRYPTOPHAN synthase beta chain|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 RSEGVLPKLE 10
++EG++P LE
Sbjct: 338 KTEGIIPALE 347


>sp|TRPB1_AERPE|TRYPTOPHAN synthase beta chain 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 RSEGVLPKLE 10
RSEGV+P E
Sbjct: 370 RSEGVVPAPE 379


>sp|CBIT_METJA|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 RSEGVLPKLE 10
R+E VL KLE
Sbjct: 91 RAEDVLDKLE 100


>sp|PYRB_THEKO|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus kodakarensis

Query: 3 EGVLPKLE 10
EG +PKL+
Sbjct: 216 EGAIPKLD 223


>sp|ARGB_METHJ|ACETYLGLUTAMATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 SEGVLPKL 9
SEG++PK+
Sbjct: 241 SEGMIPKV 248


>sp|TRPB2_ARCFU|TRYPTOPHAN synthase beta chain 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RSEGVLPKLE 10
R+EG++P E
Sbjct: 376 RTEGIIPAPE 385




316|SequenceR|1585|1576|KVAISRSEGV

***** No hits found ******


317|SequenceR|1590|1581|NSSVAKVAIS

>sp|SYT_NITMS|THREONINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 NSSVAKVAIS 10
+SSVAK AIS
Sbjct: 49 DSSVAKNAIS 58


>sp|HIS7_METS3|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 NSSVAKVAIS 10
+ SVAKVAI
Sbjct: 100 DESVAKVAID 109


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 1 NSSVAKVAIS 10
N+S+AK+ I+
Sbjct: 1084 NTSIAKIPIT 1093




318|SequenceR|1595|1586|DKQSINSSVA

***** No hits found ******


319|SequenceR|1600|1591|KLDFVDKQSI

***** No hits found ******


320|SequenceR|1605|1596|LEATIKLDFV

>sp|DNAG_SULAC|DNA primase DnaG|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LEATIKLDFV 10
L + IKLD+V
Sbjct: 229 LSSNIKLDYV 238


>sp|AROE_METMA|SHIKIMATE dehydrogenase (NADP(+))|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EATIKLDFV 10
E +KLDFV
Sbjct: 67 EKALKLDFV 75


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 1 LEATIKLD 8
LEA +KLD
Sbjct: 597 LEALVKLD 604


>sp|DNAG_STAMF|DNA primase DnaG|Staphylothermus marinus (strain ATCC 43588

Query: 4 TIKLDFV 10
TIK+DF+
Sbjct: 230 TIKVDFI 236




321|SequenceR|1610|1601|VNFANLEATI

>sp|URED_NATPD|UREASE accessory protein UreD|Natronomonas pharaonis (strain ATCC 35678

Query: 2 NFANLEATI 10
N+A+L+AT+
Sbjct: 113 NYAHLDATL 121




322|SequenceR|1615|1606|QDCVFVNFAN

>sp|QUEC1_SULTO|7-CYANO-7-DEAZAGUANINE synthase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DCVFVNFA 9
DC+F+N+
Sbjct: 28 DCLFINYG 35


>sp|FAU1_SULAC|PROBABLE ribonuclease FAU-1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QDCVFVNF 8
+DC F+NF
Sbjct: 91 EDCKFMNF 98


>sp|Y1153_METTH|UNCHARACTERIZED protein MTH_1153|Methanothermobacter thermautotrophicus (strain

Query: 1 QDCVFVNFA 9
+DC+FV+ A
Sbjct: 473 RDCIFVSDA 481


>sp|COFH_ARCFU|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Archaeoglobus fulgidus (strain ATCC

Query: 2 DCVFVNFAN 10
DC F +F N
Sbjct: 56 DCKFCSFRN 64




323|SequenceR|1620|1611|AINCKQDCVF

>sp|BIOB_METJA|BIOTIN synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CKQDCVF 10
CK+DC+F
Sbjct: 65 CKEDCIF 71


>sp|TYW1_METJA|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Methanocaldococcus jannaschii

Query: 2 INCKQDCVF 10
I C+Q+C+F
Sbjct: 60 IWCQQNCIF 68


>sp|CSA1_SACS2|CRISPR-ASSOCIATED exonuclease Csa1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 AINCKQDCVF 10
A +C+ DC+F
Sbjct: 276 AKDCESDCMF 285


>sp|BIOB_NATPD|BIOTIN synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 AINCKQDCVF 10
A NC +DC F
Sbjct: 65 AGNCAEDCGF 74


>sp|Y114_METTH|UNCHARACTERIZED protein MTH_114|Methanothermobacter thermautotrophicus (strain

Query: 1 AINCKQDCVF 10
++NC DC +
Sbjct: 10 SMNCPSDCSY 19


>sp|BIOB_CENSY|BIOTIN synthase|Cenarchaeum symbiosum (strain A)

Query: 4 CKQDCVF 10
C +DC F
Sbjct: 61 CSEDCTF 67


>sp|TRPD_META3|ANTHRANILATE phosphoribosyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 AINCKQDC 8
A+N K+DC
Sbjct: 118 ALNIKKDC 125


>sp|BIOB_NITMS|BIOTIN synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 CKQDCVF 10
C +DC F
Sbjct: 68 CSEDCTF 74


>sp|HIS3_METB6|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanoregula boonei (strain DSM 21154

Query: 2 INCKQDCV 9
++C +DC+
Sbjct: 72 VDCDEDCL 79


>sp|MTBC2_METMA|DIMETHYLAMINE corrinoid protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 INCKQDCVF 10
I+CK+D V
Sbjct: 16 ISCKKDAVL 24


>sp|MTBC1_METMA|DIMETHYLAMINE corrinoid protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 INCKQDCVF 10
I+CK+D V
Sbjct: 16 ISCKKDAVL 24


>sp|RLMN_NITMS|RIBOSOMAL RNA large subunit methyltransferase|Nitrosopumilus maritimus

Query: 2 INCKQDCVF 10
I C CVF
Sbjct: 117 IGCAMGCVF 125


>sp|HIS3_METAR|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanocella arvoryzae (strain DSM 22066

Query: 2 INCKQDCVF 10
I+C +DC+
Sbjct: 71 IDCDRDCLL 79


>sp|LMRAC_THELN|LEUCINE/METHIONINE racemase|Thermococcus litoralis (strain ATCC 51850

Query: 3 NCKQDCV 9
+CK +CV
Sbjct: 183 SCKMECV 189




324|SequenceR|1625|1616|HIKIDAINCK

>sp|Y495_ARCFU|UNCHARACTERIZED protein AF_0495|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HIKIDAINCK 10
+ KIDA+ CK
Sbjct: 61 YYKIDAVPCK 70


>sp|Y3016_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 HIKIDAINCK 10
H++I+ ++C+
Sbjct: 316 HVRIEKLSCR 325


>sp|DGGGP_METMA|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IKIDAIN 8
IKID+IN
Sbjct: 76 IKIDSIN 82


>sp|DGGGP_METAC|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IKIDAIN 8
IKID+IN
Sbjct: 76 IKIDSIN 82




325|SequenceR|1630|1621|SADMGHIKID

>sp|SYT_METTH|THREONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 SADMGHIK 8
SAD+GH++
Sbjct: 210 SADVGHLR 217


>sp|SYT_METST|THREONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 SADMGHIK 8
+AD+GHI+
Sbjct: 216 AADVGHIR 223


>sp|KUP_METHJ|PROBABLE potassium transport system protein|Methanospirillum hungatei JF-1

Query: 2 ADMGHI 7
ADMGH+
Sbjct: 239 ADMGHL 244


>sp|KUP_METBF|PROBABLE potassium transport system protein|Methanosarcina barkeri (strain

Query: 2 ADMGHI 7
ADMGH+
Sbjct: 231 ADMGHL 236


>sp|KUP_METAC|PROBABLE potassium transport system protein|Methanosarcina acetivorans

Query: 2 ADMGHI 7
ADMGH+
Sbjct: 231 ADMGHL 236


>sp|SYT_METKA|THREONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 SADMGHIK 8
+AD+GH++
Sbjct: 213 AADVGHVR 220


>sp|RPE_METJA|RIBULOSE-PHOSPHATE 3-epimerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SADMGHIK 8
SAD GH++
Sbjct: 10 SADFGHLR 17


>sp|KDGK_THETE|2-DEHYDRO-3-DEOXYGLUCONOKINASE tenax

Query: 3 DMGHIKID 10
D+ H+K+D
Sbjct: 90 DVSHVKVD 97


>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 ADMGHI 7
AD+GHI
Sbjct: 209 ADLGHI 214


>sp|KDGK_SACS2|2-DEHYDRO-3-DEOXYGLUCONOKINASE/2-DEHYDRO-3-DEOXYGALACTONOKINASE solfataricus (strain ATCC 35092

Query: 3 DMGHIKID 10
D HIK+D
Sbjct: 75 DTSHIKVD 82


>sp|DCDB_METB6|DCTP deaminase, dUMP-forming|Methanoregula boonei (strain DSM 21154

Query: 5 GHIKID 10
GHI+ID
Sbjct: 15 GHIRID 20


>sp|ALBA_NANEQ|DNA/RNA-BINDING protein Alba|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 DMGHIKID 10
D+G IKID
Sbjct: 58 DVGDIKID 65


>sp|PURT_METM5|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 4 MGHIKID 10
+GHI+ID
Sbjct: 219 IGHIQID 225


>sp|PURT_METVS|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus vannielii

Query: 4 MGHIKID 10
+GHI+ID
Sbjct: 219 IGHIQID 225


>sp|PURT_METM7|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 4 MGHIKID 10
+GHI+ID
Sbjct: 219 IGHIQID 225




326|SequenceR|1635|1626|PKVSISADMG

>sp|AATB3_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain

Query: 2 KVSISADM 9
K+S+S+DM
Sbjct: 82 KISLSSDM 89




327|SequenceR|1640|1631|VDTQKPKVSI

>sp|TRUA_METAC|TRNA pseudouridine synthase A|Methanosarcina acetivorans (strain ATCC

Query: 2 DTQKPKVSI 10
DT+KP ++I
Sbjct: 68 DTEKPNLAI 76


>sp|ARCA_HALS3|ARGININE deiminase|Halobacterium salinarum (strain ATCC 29341

Query: 2 DTQKPKVSI 10
DT+KP+V I
Sbjct: 195 DTRKPEVDI 203


>sp|RS4E_PYRFU|SMALL ribosomal subunit protein eS4|Pyrococcus furiosus (strain ATCC

Query: 1 VDTQKPKVSI 10
V T KPK+S+
Sbjct: 233 VGTDKPKISL 242




328|SequenceR|1645|1636|KLRAFVDTQK

>sp|FPOC_METMA|F(420)H(2) dehydrogenase subunit C|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KLRAFVDTQK 10
++RA+VD K
Sbjct: 28 RIRAYVDKDK 37


>sp|SYT_METAR|THREONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 KLRAFVDTQ 9
KL+AFVD +
Sbjct: 196 KLKAFVDYE 204


>sp|SYH_METHJ|HISTIDINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KLRAFVDTQK 10
K+RAF+D ++
Sbjct: 177 KIRAFLDKRE 186




329|SequenceR|1650|1641|MVIIDKLRAF

>sp|CS3HD_PYRFU|CRISPR-ASSOCIATED endonuclease Cas3-HD|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VIIDKLRAF 10
V++DKLR F
Sbjct: 137 VVLDKLRTF 145


>sp|Y1700_PYRHO|UPF0292 protein PH1700|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VIIDKLRAF 10
IIDKLR F
Sbjct: 11 AIIDKLREF 19


>sp|Y474_PYRAB|UPF0292 protein PYRAB04740|Pyrococcus abyssi (strain GE5 /

Query: 2 VIIDKLRAF 10
IIDKLR F
Sbjct: 11 AIIDKLREF 19


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 IIDKLRAF 10
++DKLR F
Sbjct: 560 VVDKLRRF 567


>sp|Y187_THEON|UPF0292 protein TON_0187|Thermococcus onnurineus (strain NA1)

Query: 3 IIDKLRAF 10
+IDKLR F
Sbjct: 12 LIDKLREF 19


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 IIDKLRA 9
IIDK+RA
Sbjct: 729 IIDKIRA 735


>sp|Y423_THESM|UPF0292 protein TSIB_0423|Thermococcus sibiricus (strain DSM 12597

Query: 3 IIDKLRAF 10
+IDKLR F
Sbjct: 12 LIDKLREF 19


>sp|ADEC_METBF|ADENINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 2 VIIDKLRAF 10
+I+D L+AF
Sbjct: 302 IIVDDLKAF 310


>sp|TBP_THEAC|TATA-BOX-BINDING protein|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VIIDKLRA 9
+IIDKL+A
Sbjct: 80 IIIDKLKA 87


>sp|TBP_THEVO|TATA-BOX-BINDING protein|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VIIDKLRA 9
+IIDKL+A
Sbjct: 80 IIIDKLKA 87


>sp|CS3HD_METJA|CRISPR-ASSOCIATED endonuclease Cas3-HD|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VIIDKLRAF 10
V++DKL+ F
Sbjct: 144 VVLDKLKKF 152




330|SequenceR|1655|1646|QLDVNMVIID

>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 2 LDVNMVIID 10
+DVN V++D
Sbjct: 495 MDVNQVVVD 503


>sp|Y1402_METJA|UNCHARACTERIZED protein MJ1402|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QLDVNMVIID 10
Q+DVN+V+ D
Sbjct: 335 QVDVNIVLKD 344


>sp|DTDA_METB6|D-AMINOACYL-TRNA deacylase|Methanoregula boonei (strain DSM 21154

Query: 2 LDVNMVI 8
LDVN+VI
Sbjct: 56 LDVNLVI 62




331|SequenceR|1660|1651|KKHISQLDVN

>sp|NADB_PYRHO|L-ASPARTATE oxidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KKHISQLDVN 10
+KH +LDVN
Sbjct: 129 EKHARELDVN 138


>sp|MOAA_SULTO|PROBABLE GTP 3',8-cyclase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KKHISQLD 8
KK+ISQLD
Sbjct: 158 KKNISQLD 165




332|SequenceR|1665|1656|LISVAKKHIS

>sp|SPEE2_HYPBU|POLYAMINE aminopropyltransferase 2|Hyperthermus butylicus (strain DSM 5456

Query: 1 LISVAKKHIS 10
L+ +AKKH++
Sbjct: 116 LVELAKKHLA 125


>sp|FENR_SULTO|FERREDOXIN--NADP reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ISVAKKHI 9
+SVAKK+I
Sbjct: 306 VSVAKKYI 313


>sp|ARLY_NITMS|ARGININOSUCCINATE lyase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 LISVAKKH 8
L+SVAK H
Sbjct: 133 LVSVAKNH 140


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 1 LISVAKKH 8
L+S A+KH
Sbjct: 379 LVSAARKH 386


>sp|FENR_SACS2|FERREDOXIN--NADP reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ISVAKKHI 9
ISVAKK++
Sbjct: 305 ISVAKKYV 312


>sp|FENR1_SULAC|FERREDOXIN--NADP reductase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 ISVAKKHI 9
+SVAKK+I
Sbjct: 301 VSVAKKYI 308




333|SequenceR|1670|1661|FVEDGLISVA

>sp|SYK_PYRAB|LYSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 EDGLISV 9
EDG+ISV
Sbjct: 385 EDGIISV 391


>sp|DCDB_METTH|DCTP deaminase, dUMP-forming|Methanothermobacter thermautotrophicus

Query: 1 FVEDGLISV 9
++E+GLI++
Sbjct: 12 YIEEGLITI 20


>sp|CSM5_METJA|CRISPR system Cms protein Csm5|Methanocaldococcus jannaschii (strain

Query: 1 FVEDGLISV 9
F+EDGL +
Sbjct: 70 FIEDGLAHI 78


>sp|CPKA_PYRAB|CARBAMATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 FVEDGLISVA 10
VEDG+I +A
Sbjct: 182 LVEDGVIVIA 191


>sp|DLDH2_HALMA|DIHYDROLIPOYL dehydrogenase 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 FVEDGLISVA 10
FV+DG + VA
Sbjct: 120 FVDDGTVRVA 129


>sp|Y1451_METJA|UNCHARACTERIZED protein MJ1451|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FVEDGL 6
FVEDGL
Sbjct: 433 FVEDGL 438


>sp|MTXH_METAC|PUTATIVE methyltransferase mtx subunit H|Methanosarcina acetivorans (strain

Query: 1 FVEDGLISVA 10
+E+GL+S+A
Sbjct: 175 LLEEGLLSIA 184


>sp|GAD_SACS2|D-GLUCONATE/D-GALACTONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FVEDGLISV 9
+VE+GL+++
Sbjct: 260 YVEEGLVNI 268


>sp|MTXH_METMA|PUTATIVE methyltransferase mtx subunit H|Methanosarcina mazei (strain ATCC

Query: 1 FVEDGLISVA 10
+E+GL+S+A
Sbjct: 175 LLEEGLLSIA 184


>sp|MTXH_METBF|PUTATIVE methyltransferase mtx subunit H|Methanosarcina barkeri (strain

Query: 1 FVEDGLISVA 10
+E+GL+S+A
Sbjct: 175 LLEEGLLSIA 184


>sp|HUTI_HALMA|IMIDAZOLONEPROPIONASE marismortui (strain ATCC 43049

Query: 1 FVEDGLISVA 10
F E+G+ SVA
Sbjct: 217 FCEEGVFSVA 226


>sp|DHSD_NATPH|SUCCINATE dehydrogenase hydrophobic membrane anchor|Natronomonas pharaonis

Query: 1 FVEDGLISVA 10
F+E GL++VA
Sbjct: 72 FLEVGLLAVA 81




334|SequenceR|1675|1666|TLQFRFVEDG

>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 2 LQFRFVEDG 10
+QFR+ EDG
Sbjct: 868 VQFRYGEDG 876


>sp|MCM_SULAC|MINICHROMOSOME maintenance protein MCM|Sulfolobus acidocaldarius (strain ATCC

Query: 3 QFRFVED 9
QF+F+ED
Sbjct: 178 QFKFIED 184


>sp|RS8_METJA|SMALL ribosomal subunit protein uS8|Methanocaldococcus jannaschii

Query: 3 QFRFVEDG 10
+F F+EDG
Sbjct: 49 EFEFIEDG 56


>sp|RS8_METIG|SMALL ribosomal subunit protein uS8|Methanotorris igneus (Methanococcus

Query: 3 QFRFVEDG 10
+F F+EDG
Sbjct: 49 EFEFIEDG 56


>sp|RS8_METBU|SMALL ribosomal subunit protein uS8|Methanococcoides burtonii (strain

Query: 4 FRFVEDG 10
F FVEDG
Sbjct: 50 FEFVEDG 56


>sp|OFOA_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Sulfolobus sp

Query: 3 QFRFVEDG 10
+F+F EDG
Sbjct: 444 RFKFTEDG 451


>sp|OFOA1_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Sulfurisphaera tokodaii (strain DSM

Query: 3 QFRFVEDG 10
+F+F EDG
Sbjct: 444 RFKFTEDG 451


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 2 LQFRFVEDG 10
+QF++ EDG
Sbjct: 1306 IQFKYGEDG 1314


>sp|MPTA_ARCFU|GTP cyclohydrolase MptA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 RFVEDG 10
RFVEDG
Sbjct: 248 RFVEDG 253


>sp|RS8_METB6|SMALL ribosomal subunit protein uS8|Methanoregula boonei (strain DSM

Query: 4 FRFVEDG 10
F F+EDG
Sbjct: 50 FEFIEDG 56


>sp|RADB_THEVO|DNA repair and recombination protein|Thermoplasma volcanium (strain

Query: 1 TLQFRFVEDG 10
+++FR V+DG
Sbjct: 216 SVEFRIVQDG 225


>sp|LYSX_SULTO|ALPHA-AMINOADIPATE--LYSW ligase LysX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TLQFRFV 7
TLQFR++
Sbjct: 161 TLQFRYI 167


>sp|RL31_HALLT|LARGE ribosomal subunit protein eL31|Halorubrum lacusprofundi (strain

Query: 5 RFVEDG 10
RFVEDG
Sbjct: 77 RFVEDG 82


>sp|RS8_SULTO|SMALL ribosomal subunit protein uS8|Sulfurisphaera tokodaii (strain DSM

Query: 3 QFRFVEDG 10
+F F++DG
Sbjct: 49 EFEFIDDG 56


>sp|RS8_METTP|SMALL ribosomal subunit protein uS8|Methanothrix thermoacetophila

Query: 3 QFRFVEDG 10
+F F++DG
Sbjct: 48 EFEFIDDG 55


>sp|RS8_METBF|SMALL ribosomal subunit protein uS8|Methanosarcina barkeri (strain

Query: 3 QFRFVEDG 10
+F F++DG
Sbjct: 49 EFEFIDDG 56


>sp|RS8_THEGJ|SMALL ribosomal subunit protein uS8|Thermococcus gammatolerans (strain

Query: 3 QFRFVEDG 10
+F F++DG
Sbjct: 49 EFEFIDDG 56


>sp|RS8_THEON|SMALL ribosomal subunit protein uS8|Thermococcus onnurineus (strain

Query: 3 QFRFVEDG 10
+F F++DG
Sbjct: 49 EFEFIDDG 56


>sp|RS8_THESM|SMALL ribosomal subunit protein uS8|Thermococcus sibiricus (strain DSM

Query: 3 QFRFVEDG 10
+F F++DG
Sbjct: 49 EFEFIDDG 56


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 2 LQFRFVEDG 10
+QF F EDG
Sbjct: 903 VQFEFGEDG 911


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 2 LQFRFVEDG 10
+QF F EDG
Sbjct: 903 VQFEFGEDG 911


>sp|RS8_PYRAB|SMALL ribosomal subunit protein uS8|Pyrococcus abyssi (strain GE5 /

Query: 3 QFRFVEDG 10
+F F++DG
Sbjct: 49 EFEFIDDG 56


>sp|RS8_HALWD|SMALL ribosomal subunit protein uS8|Haloquadratum walsbyi (strain DSM

Query: 4 FRFVEDG 10
F FV+DG
Sbjct: 50 FEFVDDG 56


>sp|RS8_PYRHO|SMALL ribosomal subunit protein uS8|Pyrococcus horikoshii (strain ATCC

Query: 3 QFRFVEDG 10
+F F++DG
Sbjct: 49 EFEFIDDG 56


>sp|RS8_PYRFU|SMALL ribosomal subunit protein uS8|Pyrococcus furiosus (strain ATCC

Query: 3 QFRFVEDG 10
+F F++DG
Sbjct: 49 EFEFIDDG 56


>sp|RS8_NATPD|SMALL ribosomal subunit protein uS8|Natronomonas pharaonis (strain ATCC

Query: 4 FRFVEDG 10
F+FV+DG
Sbjct: 50 FQFVDDG 56




335|SequenceR|1680|1671|ADPYLTLQFR

>sp|AROB_PYRFU|3-DEHYDROQUINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DPYLTLQ 8
DPY TLQ
Sbjct: 285 DPYTTLQ 291


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 DPYLTLQ 8
DPY+TL+
Sbjct: 146 DPYMTLK 152


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 DPYLTLQ 8
DPY+TL+
Sbjct: 146 DPYMTLK 152


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DPYLTLQ 8
DPY+TL+
Sbjct: 146 DPYMTLK 152


>sp|LYSX_SULTO|ALPHA-AMINOADIPATE--LYSW ligase LysX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 YLTLQFR 10
Y TLQFR
Sbjct: 159 YTTLQFR 165


>sp|AROE_THEAC|SHIKIMATE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ADPYLTLQFR 10
DP+ T+ FR
Sbjct: 190 GDPFSTVDFR 199


>sp|SDO1_PYRHO|RIBOSOME maturation protein SDO1 homolog|Pyrococcus horikoshii (strain

Query: 2 DPYLTLQFR 10
DPYL F+
Sbjct: 25 DPYLARDFK 33


>sp|SDO1_PYRAB|RIBOSOME maturation protein SDO1 homolog|Pyrococcus abyssi (strain GE5 /

Query: 2 DPYLTLQFR 10
DPYL F+
Sbjct: 25 DPYLARDFK 33


>sp|SDO1_THEKO|RIBOSOME maturation protein SDO1 homolog|Thermococcus kodakarensis (strain

Query: 2 DPYLTLQFR 10
DPYL F+
Sbjct: 25 DPYLARDFK 33


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DPYLTLQ 8
DPY+T++
Sbjct: 148 DPYMTIK 154


>sp|HJC_METTH|CROSSOVER junction endodeoxyribonuclease Hjc|Methanothermobacter

Query: 1 ADPYLTLQFR 10
A PY+ ++FR
Sbjct: 80 ARPYIGIKFR 89




336|SequenceR|1685|1676|AEGETADPYL

>sp|GRPE_THEVO|PROTEIN GrpE|Thermoplasma volcanium (strain ATCC 51530

Query: 1 AEGETADPYL 10
AEGE DPYL
Sbjct: 127 AEGEKFDPYL 136


>sp|GRPE_METTH|PROTEIN GrpE|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 AEGETADPYL 10
AEGE DP+L
Sbjct: 122 AEGEKFDPFL 131


>sp|GRPE_THEAC|PROTEIN GrpE|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 AEGETADPYL 10
AEG DPYL
Sbjct: 126 AEGSKFDPYL 135


>sp|MOAA_SACS2|PROBABLE GTP 3',8-cyclase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EGETADPYL 10
EGE D YL
Sbjct: 30 EGEEGDNYL 38


>sp|Y274_METJA|UNCHARACTERIZED protein MJ0274|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GETADPYL 10
GET PYL
Sbjct: 378 GETGLPYL 385


>sp|Y2121_METS5|PROTEIN Msed_2121|Metallosphaera sedula (strain ATCC 51363

Query: 4 ETADPYL 10
ET++PYL
Sbjct: 217 ETSEPYL 223


>sp|AATD_THESM|A-TYPE ATP synthase subunit D|Thermococcus sibiricus (strain DSM 12597

Query: 1 AEGETADPY 9
AEG DPY
Sbjct: 109 AEGFRRDPY 117


>sp|LEUC2_METKA|3-ISOPROPYLMALATE dehydratase large subunit 2|Methanopyrus kandleri (strain AV19 /

Query: 1 AEGETADP 8
AEGE DP
Sbjct: 390 AEGELVDP 397


>sp|LONH_METTH|PUTATIVE lon protease homolog|Methanothermobacter thermautotrophicus (strain

Query: 1 AEGETADP 8
AEGE DP
Sbjct: 109 AEGELIDP 116




337|SequenceR|1690|1681|SMDAYAEGET

>sp|GPMI2_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina acetivorans (strain ATCC

Query: 3 DAYAEGET 10
DAYA GET
Sbjct: 231 DAYARGET 238


>sp|TRM56_METAC|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosarcina acetivorans

Query: 1 SMDAYAEGE 9
+MD AEGE
Sbjct: 141 TMDRIAEGE 149


>sp|GVPC2_HALSA|GAS vesicle protein C2|Halobacterium salinarum (strain ATCC 700922

Query: 1 SMDAYAE 7
+MDAYAE
Sbjct: 23 AMDAYAE 29


>sp|TRM56_METMA|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosarcina mazei (strain

Query: 1 SMDAYAEGE 9
+MD AEGE
Sbjct: 141 TMDRIAEGE 149


>sp|EF2_CENSY|ELONGATION factor 2|Cenarchaeum symbiosum (strain A)

Query: 2 MDAYAEGE 9
+DAY+EG+
Sbjct: 226 IDAYSEGK 233


>sp|AATB_HALMA|A-TYPE ATP synthase subunit B|Haloarcula marismortui (strain ATCC 43049

Query: 4 AYAEGE 9
AYAEGE
Sbjct: 380 AYAEGE 385


>sp|AATB_HALSA|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC 700922

Query: 4 AYAEGE 9
AYAEGE
Sbjct: 381 AYAEGE 386


>sp|AATB_HALS3|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC 29341

Query: 4 AYAEGE 9
AYAEGE
Sbjct: 381 AYAEGE 386


>sp|AATB_HALLT|A-TYPE ATP synthase subunit B|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 AYAEGE 9
AYAEGE
Sbjct: 381 AYAEGE 386


>sp|AATB_HALVD|A-TYPE ATP synthase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 4 AYAEGE 9
AYAEGE
Sbjct: 378 AYAEGE 383


>sp|COFE_METMA|COENZYME F420:L-glutamate ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 MDAYAEGET 10
+D Y EG+T
Sbjct: 221 LDYYCEGDT 229




338|SequenceR|1695|1686|KGDVKSMDAY

>sp|GPMI_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GDVKSMDAY 10
GDVK +DA+
Sbjct: 170 GDVKELDAF 178


>sp|GPMI2_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 GDVKSMDAY 10
GD+K +DA+
Sbjct: 164 GDIKKLDAF 172


>sp|Y1681_METJA|UNCHARACTERIZED protein MJ1681|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GDVKSMDAY 10
D+K MDAY
Sbjct: 215 ADMKDMDAY 223


>sp|RS2_PICTO|SMALL ribosomal subunit protein uS2|Picrophilus torridus (strain ATCC

Query: 1 KGDVKSMDAY 10
+GD+KS D +
Sbjct: 180 RGDIKSYDEF 189


>sp|ARGC_METJA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GDVKSMDAY 10
GD+ +DAY
Sbjct: 62 GDIDKVDAY 70


>sp|ILVD_METBU|DIHYDROXY-ACID dehydratase|Methanococcoides burtonii (strain DSM 6242

Query: 1 KGDVKSMD 8
KGD+KS D
Sbjct: 420 KGDIKSGD 427


>sp|Y858_METMJ|UPF0212 protein Memar_0858|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 DVKSMD 8
DVKSMD
Sbjct: 16 DVKSMD 21


>sp|RNP3_THEGJ|RIBONUCLEASE P protein component 3|Thermococcus gammatolerans (strain DSM

Query: 3 DVKSMDAY 10
DV+S++AY
Sbjct: 11 DVRSVEAY 18


>sp|KHSE_AERPE|HOMOSERINE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GDVKSMDA 9
GD+KSM A
Sbjct: 221 GDLKSMGA 228


>sp|EF1A_THEVO|ELONGATION factor 1-alpha|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KGDVKSMDAY 10
+GDVKS++ +
Sbjct: 267 QGDVKSIEMH 276


>sp|EF1A_THEAC|ELONGATION factor 1-alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KGDVKSMDAY 10
+GDVKS++ +
Sbjct: 267 QGDVKSIEMH 276




339|SequenceR|1700|1691|VKFSLKGDVK

>sp|SYS2_METTH|TYPE-2 serine--tRNA ligase|Methanothermobacter thermautotrophicus

Query: 1 VKFSLKGDVK 10
+KF LKG +K
Sbjct: 1 MKFKLKGIIK 10


>sp|SYE_CALMQ|GLUTAMATE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 VKFSLKGDVK 10
VKF+ K DVK
Sbjct: 18 VKFNGKADVK 27


>sp|PURO_HALWD|IMP cyclohydrolase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 KFSLKGDVK 10
+ SLKGD++
Sbjct: 148 QLSLKGDIE 156


>sp|RL18_METS5|LARGE ribosomal subunit protein uL18|Metallosphaera sedula (strain ATCC

Query: 1 VKFSLKGDV 9
VKF KGD+
Sbjct: 49 VKFDPKGDI 57


>sp|SYS2_METBU|TYPE-2 serine--tRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VKFSLKGDVK 10
+KF+LKG K
Sbjct: 3 LKFNLKGAFK 12


>sp|Y1418_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 KFSLKGDVK 10
KFS KG VK
Sbjct: 480 KFSGKGSVK 488


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VKFSLKGD 8
VKF +KG+
Sbjct: 206 VKFKIKGE 213




340|SequenceR|1705|1696|IQICGVKFSL

>sp|Y093_METJA|UNCHARACTERIZED protein MJ0093|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IQICGVKFSL 10
I+IC VKF +
Sbjct: 31 IEICNVKFDI 40


>sp|TRPF_META3|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 IQICGVK 7
I+ICG+K
Sbjct: 3 IKICGIK 9


>sp|TRPF_THEKO|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IQICGVK 7
++ICGVK
Sbjct: 5 VKICGVK 11


>sp|TRPF_AERPE|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Aeropyrum pernix (strain ATCC 700893

Query: 1 IQICGVK 7
++ICGVK
Sbjct: 4 VKICGVK 10


>sp|TRPF_METMP|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IQICGVK 7
I+ICG+K
Sbjct: 3 IKICGIK 9


>sp|TRPF_METM6|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus maripaludis (strain C6 /

Query: 1 IQICGVK 7
I+ICG+K
Sbjct: 3 IKICGIK 9


>sp|TRM1_ARCFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Archaeoglobus fulgidus

Query: 4 CGVKFSL 10
CG KFSL
Sbjct: 241 CGGKFSL 247


>sp|TRPF_METM7|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus maripaludis (strain C7 /

Query: 1 IQICGVK 7
I+ICG+K
Sbjct: 3 IKICGIK 9


>sp|TRPF_PYRFU|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IQICGVK 7
++ICG+K
Sbjct: 3 VKICGIK 9


>sp|TRPF_METTH|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 IQICGVK 7
++ICG+K
Sbjct: 13 VKICGIK 19


>sp|TRPF2_METMA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IQICGVK 7
I++CG+K
Sbjct: 3 IKVCGIK 9


>sp|TRPF_PYRAB|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Pyrococcus abyssi (strain GE5 /

Query: 1 IQICGVK 7
+++CGVK
Sbjct: 3 VKVCGVK 9


>sp|TRPF_ARCFU|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IQICGVK 7
+++CGVK
Sbjct: 3 VKVCGVK 9


>sp|GLNA_METTH|GLUTAMINE synthetase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 CGVKF 8
CGVKF
Sbjct: 15 CGVKF 19


>sp|TBP_METKA|TATA-BOX-BINDING protein|Methanopyrus kandleri (strain AV19 /

Query: 4 CGVKF 8
CGVKF
Sbjct: 82 CGVKF 86


>sp|TRPF_METM5|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus maripaludis (strain C5 /

Query: 1 IQICGVK 7
I+ICG+K
Sbjct: 3 IKICGIK 9


>sp|TRPF_METVS|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus vannielii (strain ATCC 35089

Query: 1 IQICGVK 7
I+ICG+K
Sbjct: 3 IKICGIK 9


>sp|GUAAA_METVS|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus vannielii

Query: 2 QICGVKFS 9
++CG KF+
Sbjct: 181 KVCGFKFN 188




341|SequenceR|1710|1701|KHVYVIQICG

>sp|TRM56_HALWD|TRNA (cytidine(56)-2'-O)-methyltransferase|Haloquadratum walsbyi (strain

Query: 1 KHVYVIQICG 10
+HV V Q CG
Sbjct: 165 EHVVVPQACG 174


>sp|ADEC_METJA|ADENINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KHVYVIQIC 9
K++Y++ IC
Sbjct: 238 KNIYLLNIC 246


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 VYVIQIC 9
VYVIQ C
Sbjct: 899 VYVIQEC 905


>sp|Y3513_METJA|MCM-LIKE protein MJECL13|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KHVYVIQICG 10
KH+Y+ CG
Sbjct: 134 KHLYICPKCG 143


>sp|HEM1_PYRIL|GLUTAMYL-TRNA reductase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 VYVIQICG 10
+YV+ CG
Sbjct: 42 IYVLHTCG 49


>sp|SYP_METST|PROLINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 HVYVIQIC 9
H YV Q+C
Sbjct: 242 HDYVHQVC 249


>sp|METE_METJA|METHIONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KHVYVIQI 8
KHV +IQI
Sbjct: 152 KHVPIIQI 159




342|SequenceR|1715|1706|LSMFFKHVYV

>sp|LEUC2_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus furiosus (strain ATCC

Query: 3 MFFKHVY 9
+FF HVY
Sbjct: 50 IFFDHVY 56


>sp|LEUC2_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 3 MFFKHVY 9
+FF HVY
Sbjct: 50 IFFDHVY 56


>sp|CDC61_SACS2|ORC1-TYPE DNA replication protein 1|Saccharolobus solfataricus (strain ATCC

Query: 5 FKHVYV 10
FKHVY+
Sbjct: 88 FKHVYI 93


>sp|LEUC_PYRHO|3-ISOPROPYLMALATE dehydratase large subunit|Pyrococcus horikoshii (strain ATCC

Query: 3 MFFKHVY 9
+FF HVY
Sbjct: 50 VFFDHVY 56


>sp|RL3_METS5|LARGE ribosomal subunit protein uL3|Metallosphaera sedula (strain ATCC

Query: 2 SMFFKHVYV 10
SMF K +YV
Sbjct: 65 SMFGKEIYV 73


>sp|KCY_PYRFU|CYTIDYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 FKHVY 9
FKHVY
Sbjct: 31 FKHVY 35


>sp|KCY_PYRAB|CYTIDYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 5 FKHVY 9
FKHVY
Sbjct: 31 FKHVY 35




343|SequenceR|1720|1711|NLFNLLSMFF

>sp|METK_PYRHO|S-ADENOSYLMETHIONINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LFNLLSMF 9
++NLL+MF
Sbjct: 317 IYNLLAMF 324


>sp|Y1230_METJA|UNCHARACTERIZED protein MJ1230|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NLFNLLSMFF 10
NL N+L +FF
Sbjct: 66 NLMNILDIFF 75




344|SequenceR|1725|1716|ATQFNNLFNL

>sp|KHSE_SACS2|HOMOSERINE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 FNNLFNL 10
FNNLFNL
Sbjct: 107 FNNLFNL 113


>sp|DNAJ_HALMT|CHAPERONE protein DnaJ|Haloferax mediterranei (strain ATCC 33500

Query: 4 FNNLFN 9
FNNLFN
Sbjct: 112 FNNLFN 117


>sp|PRNK_METJA|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase MJ1315|Methanocaldococcus jannaschii (strain

Query: 2 TQFNNLFNL 10
T FNNL+ +
Sbjct: 88 TNFNNLYEI 96


>sp|RL10_SULAC|LARGE ribosomal subunit protein uL10|Sulfolobus acidocaldarius (strain

Query: 5 NNLFNL 10
NNLFN+
Sbjct: 64 NNLFNI 69


>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QFNNLFN 9
+FNN++N
Sbjct: 133 RFNNIYN 139


>sp|DPOL3_SACS2|DNA polymerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 TQFNNLFNL 10
T+ N+L+NL
Sbjct: 560 TKINSLYNL 568




345|SequenceR|1730|1721|SLAEKATQFN

***** No hits found ******


346|SequenceR|1735|1726|QVTATSLAEK

***** No hits found ******


347|SequenceR|1740|1731|AREAAQVTAT

>sp|RL10E_METKA|LARGE ribosomal subunit protein uL16|Methanopyrus kandleri (strain AV19

Query: 1 AREAAQVT 8
ARE AQVT
Sbjct: 51 ARERAQVT 58




348|SequenceR|1745|1736|KMSSAAREAA

>sp|KAE1_METAR|TRNA N6-adenosine threonylcarbamoyltransferase|Methanocella arvoryzae

Query: 2 MSSAAREAA 10
M SAA+EAA
Sbjct: 202 MMSAAKEAA 210


>sp|RISB_HALLT|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 MSSAAREAA 10
M+ AAREAA
Sbjct: 19 MAEAAREAA 27




349|SequenceR|1750|1741|KQALDKMSSA

>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KQALDKMSS 9
+QA+DK+SS
Sbjct: 144 RQAIDKLSS 152


>sp|AROC_PYRNV|CHORISMATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 KQALDKM 7
+QALDKM
Sbjct: 185 QQALDKM 191


>sp|AROC_PYRIL|CHORISMATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 KQALDKM 7
+QALDKM
Sbjct: 185 QQALDKM 191


>sp|ABLA_METMP|L-LYSINE 2,3-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KQALDKMSSA 10
K+ALDK+S +
Sbjct: 253 KKALDKLSDS 262


>sp|AATE1_METHJ|A-TYPE ATP synthase subunit E|Methanospirillum hungatei JF-1 (strain

Query: 1 KQALDKMSS 9
KQALDK+ S
Sbjct: 87 KQALDKIVS 95


>sp|Y2143_SULTO|UPF0284 protein STK_21430|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 ALDKMSSA 10
ALDK+SSA
Sbjct: 173 ALDKVSSA 180


>sp|PYRG_SULTO|CTP synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KQALDKMSS 9
K+A+DK+ S
Sbjct: 338 KEAIDKLKS 346


>sp|Y767_METJA|UNCHARACTERIZED transcriptional regulator MJ0767|Methanocaldococcus jannaschii

Query: 1 KQALDKMS 8
K+AL+KMS
Sbjct: 67 KEALEKMS 74




350|SequenceR|1755|1746|LLRFSKQALD

>sp|VHUD_METJA|F420-NON-REDUCING hydrogenase vhu iron-sulfur subunit|Methanocaldococcus jannaschii

Query: 2 LRFSKQALD 10
+RF+KQ LD
Sbjct: 82 VRFAKQLLD 90


>sp|ACD1_ARCFU|ACETATE--COA ligase [ADP-forming] I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLRFSKQALD 10
LLR SK +LD
Sbjct: 644 LLRVSKLSLD 653


>sp|WTPB_PYRAB|MOLYBDATE/TUNGSTATE transport system permease protein|Pyrococcus abyssi (strain GE5 /

Query: 4 FSKQALD 10
F+KQALD
Sbjct: 30 FTKQALD 36


>sp|WTPB_PYRHO|MOLYBDATE/TUNGSTATE transport system permease protein|Pyrococcus horikoshii (strain

Query: 4 FSKQALD 10
F+KQALD
Sbjct: 30 FAKQALD 36




351|SequenceR|1760|1751|LNIDMLLRFS

>sp|UPPP_SULTO|UNDECAPRENYL-DIPHOSPHATASE tokodaii (strain DSM 16993

Query: 1 LNIDMLLRFS 10
L ID+LLRF+
Sbjct: 229 LTIDLLLRFA 238


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 NIDMLLRFS 10
N DM+LRF+
Sbjct: 277 NRDMMLRFA 285


>sp|SYT_METB6|THREONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 NIDMLLRFS 10
N DM+LRF+
Sbjct: 280 NRDMMLRFA 288


>sp|ARLY_METPE|ARGININOSUCCINATE lyase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 IDMLLRFS 10
+D+LLRFS
Sbjct: 62 MDVLLRFS 69




352|SequenceR|1765|1756|IVPAKLNIDM

>sp|PCNA_METS3|DNA polymerase sliding clamp|Methanobrevibacter smithii (strain ATCC

Query: 2 VPAKLNID 9
VP K+NID
Sbjct: 64 VPEKINID 71


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IVPAKLNIDM 10
++P KL ID+
Sbjct: 996 MIPTKLGIDV 1005


>sp|MBHLA_PYRFU|MEMBRANE-BOUND hydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IVPAKLNIDM 10
+VP KL I+M
Sbjct: 205 VVPKKLAIEM 214


>sp|Y296_METJA|PROBABLE metallo-hydrolase MJ0296|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IVPAKLNID 9
++P KLN+D
Sbjct: 163 MIPPKLNVD 171


>sp|Y3508_METJA|PROBABLE helicase MJECL08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IVPAKLN 7
I+PAKLN
Sbjct: 212 ILPAKLN 218


>sp|LEUC_PYRIL|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 IVPAKLNIDM 10
++PA +DM
Sbjct: 152 VIPAPFRVDM 161


>sp|ATGT_METVS|TRNA-GUANINE(15) transglycosylase|Methanococcus vannielii (strain ATCC 35089

Query: 1 IVPAKLNIDM 10
++PAKL +M
Sbjct: 554 LIPAKLGAEM 563


>sp|RSMA_THESM|PROBABLE ribosomal RNA small subunit|Thermococcus sibiricus (strain DSM

Query: 1 IVPAKLNIDM 10
+V AK+N+D+
Sbjct: 158 MVQAKVNVDL 167


>sp|GUAAB_METKA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanopyrus kandleri

Query: 2 VPAKLNIDM 10
+P KLN+D+
Sbjct: 150 LPEKLNLDV 158




353|SequenceR|1770|1761|SQPIIIVPAK

>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PIIIVPAK 10
PI+IVP+K
Sbjct: 65 PILIVPSK 72


>sp|COABC_METJA|COENZYME A biosynthesis bifunctional protein|Methanocaldococcus jannaschii

Query: 1 SQPIIIVPA 9
++PI IVPA
Sbjct: 129 NKPIFIVPA 137


>sp|UVRB_METST|UVRABC system protein B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 QPIIIVPAK 10
Q +II PAK
Sbjct: 237 QKVIIFPAK 245


>sp|ACD1_ARCFU|ACETATE--COA ligase [ADP-forming] I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 IIIVPAK 10
II+VPAK
Sbjct: 67 IIVVPAK 73


>sp|COFC_METBU|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 SQPIIIVPAK 10
S+ ++IVP K
Sbjct: 110 SEDVVIVPGK 119


>sp|THS_METTL|CHAPERONIN subunit|Methanothermococcus thermolithotrophicus

Query: 1 SQPIIIVP 8
+QP++++P
Sbjct: 4 NQPVVVLP 11




354|SequenceR|1775|1766|NPSVSSQPII

>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 NPSVSSQPII 10
NP V SQP I
Sbjct: 118 NPLVVSQPCI 127


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 NPSVSSQPII 10
NP V SQP I
Sbjct: 119 NPLVVSQPCI 128


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 NPSVSSQPII 10
NP V SQP I
Sbjct: 119 NPLVVSQPCI 128


>sp|TRMJ_SULAC|TRNA (cytidine-2'-O-)-methyltransferase TrmJ|Sulfolobus acidocaldarius

Query: 2 PSVSSQPI 9
P+VSS+PI
Sbjct: 162 PTVSSEPI 169


>sp|SYA_SULAC|ALANINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NPSVSSQPII 10
NP V SQP I
Sbjct: 119 NPLVVSQPCI 128


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NPSVSSQPII 10
NP V SQP I
Sbjct: 118 NPIVMSQPSI 127


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NPSVSSQPII 10
NP V SQP I
Sbjct: 118 NPIVMSQPSI 127


>sp|DPO4_SACS2|DNA polymerase IV|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NPSVSSQPII 10
NPS+ +P++
Sbjct: 20 NPSLKGKPVV 29


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 NPSVSSQPII 10
NP V SQP I
Sbjct: 117 NPLVISQPSI 126


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NPSVSSQPII 10
NP V SQP I
Sbjct: 118 NPLVISQPSI 127


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 NPSVSSQPII 10
NP V SQP I
Sbjct: 118 NPLVISQPSI 127


>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 NPSVSSQPII 10
NP V SQP I
Sbjct: 102 NPLVISQPSI 111


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 NPSVSSQPII 10
NP V SQP I
Sbjct: 118 NPLVVSQPSI 127


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 NPSVSSQPII 10
NP V SQP I
Sbjct: 113 NPLVISQPSI 122


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 NPSVSSQPII 10
NP V SQP I
Sbjct: 113 NPLVISQPSI 122


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 NPSVSSQPII 10
NP V SQP I
Sbjct: 118 NPLVVSQPSI 127


>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 NPSVSSQPII 10
NP V SQP I
Sbjct: 118 NPLVVSQPSI 127


>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 NPSVSSQPII 10
NP V SQP I
Sbjct: 118 NPLVVSQPSI 127


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 NPSVSSQPII 10
NP V SQP I
Sbjct: 118 NPLVVSQPSI 127


>sp|DPO4_METS5|DNA polymerase IV|Metallosphaera sedula (strain ATCC 51363

Query: 1 NPSVSSQPII 10
NPS+ +P++
Sbjct: 20 NPSLKGKPVV 29


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 NPSVSSQPII 10
NP V SQP I
Sbjct: 118 NPLVVSQPSI 127


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NPSVSSQPII 10
NP V SQP I
Sbjct: 118 NPLVVSQPSI 127


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 NPSVSSQPII 10
NP V SQP I
Sbjct: 113 NPLVISQPSI 122


>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NPSVSSQPII 10
NP V SQP I
Sbjct: 119 NPLVLSQPCI 128


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 NPSVSSQPII 10
NP V SQP I
Sbjct: 115 NPIVMSQPSI 124


>sp|UBAA_HALVD|SAMP-ACTIVATING enzyme E1|Haloferax volcanii (strain ATCC 29605

Query: 1 NPSVSSQPI 9
NP VS +P+
Sbjct: 99 NPDVSVEPV 107


>sp|AROE_METVS|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus vannielii (strain ATCC 35089

Query: 2 PSVSSQPII 10
P V+S+P+I
Sbjct: 204 PDVNSKPVI 212




355|SequenceR|1780|1771|DAIVANPSVS

>sp|TRM14_METJA|TRNA (guanine(6)-N2)-methyltransferase|Methanocaldococcus jannaschii

Query: 1 DAIVANP 7
D I+ANP
Sbjct: 301 DVIIANP 307


>sp|PYRG_NATPD|CTP synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DAIVANPSV 9
DA+ +NP V
Sbjct: 243 DAVFSNPDV 251


>sp|PYRF_NATPD|OROTIDINE 5'-phosphate decarboxylase|Natronomonas pharaonis (strain ATCC

Query: 1 DAIVANP 7
DAI ANP
Sbjct: 115 DAITANP 121


>sp|G3P_METMJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DAIVANPS 8
DAIV NP+
Sbjct: 181 DAIVLNPA 188


>sp|PYRG_HALSA|CTP synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DAIVANPSV 9
DA+ +NP V
Sbjct: 242 DAVFSNPDV 250


>sp|PYRG_HALS3|CTP synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DAIVANPSV 9
DA+ +NP V
Sbjct: 242 DAVFSNPDV 250




356|SequenceR|1785|1776|RILGLDAIVA

>sp|ARCC_THEVO|CARBAMATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RILGLDAIV 9
RI+G+DA++
Sbjct: 196 RIVGIDAVI 204


>sp|LPLAN_THEAC|LIPOATE-PROTEIN ligase A subunit 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RILGLDA 7
RILGLDA
Sbjct: 115 RILGLDA 121


>sp|AATE1_METHJ|A-TYPE ATP synthase subunit E|Methanospirillum hungatei JF-1 (strain

Query: 3 LGLDAIVA 10
+GLDA++A
Sbjct: 1 MGLDAVIA 8


>sp|THIDN_METJA|BIFUNCTIONAL thiamine biosynthesis protein ThiDN|Methanocaldococcus jannaschii

Query: 1 RILGLDAI 8
R+LG DAI
Sbjct: 393 RVLGRDAI 400


>sp|BIOD_METJA|ATP-DEPENDENT dethiobiotin synthetase BioD|Methanocaldococcus jannaschii (strain

Query: 1 RILGLDAIV 9
+ LGLDA+V
Sbjct: 129 KFLGLDAVV 137


>sp|HEM3_THEVO|PROBABLE porphobilinogen deaminase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 LGLDAIV 9
LGLDAIV
Sbjct: 155 LGLDAIV 161


>sp|PYRD_HALSA|DIHYDROOROTATE dehydrogenase (quinone)|Halobacterium salinarum (strain ATCC 700922

Query: 3 LGLDAIVA 10
LGLD IVA
Sbjct: 232 LGLDGIVA 239


>sp|PYRD_HALS3|DIHYDROOROTATE dehydrogenase (quinone)|Halobacterium salinarum (strain ATCC 29341

Query: 3 LGLDAIVA 10
LGLD IVA
Sbjct: 232 LGLDGIVA 239


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 ILGLDAIV 9
+LGLDA++
Sbjct: 999 MLGLDALI 1006


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LGLDAIVA 10
LG++AIVA
Sbjct: 283 LGIEAIVA 290


>sp|ARLY_ARCFU|ARGININOSUCCINATE lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RILGLDAIV 9
R+LG D +V
Sbjct: 206 RLLGFDGVV 214


>sp|F16A1_HALMA|FRUCTOSE-1,6-BISPHOSPHATASE class 1 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 RILGLDAIVA 10
R+LG+D + +
Sbjct: 65 RVLGIDGVAS 74


>sp|FENR_PICTO|FERREDOXIN--NADP reductase|Picrophilus torridus (strain ATCC 700027

Query: 3 LGLDAIV 9
LGLDA+V
Sbjct: 234 LGLDALV 240


>sp|PYRD_NATPD|DIHYDROOROTATE dehydrogenase (quinone)|Natronomonas pharaonis (strain ATCC 35678

Query: 3 LGLDAIVA 10
LGLD I+A
Sbjct: 233 LGLDGIIA 240




357|SequenceR|1790|1781|FKNEVRILGL

>sp|Y1316_METTH|UPF0215 protein MTH_1316|Methanothermobacter thermautotrophicus (strain

Query: 2 KNEVRILGL 10
K+E+RILG+
Sbjct: 15 KSEIRILGI 23


>sp|PELO_THEVO|PROTEIN pelota homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FKNEVRILG 9
F+N +RILG
Sbjct: 75 FENRLRILG 83


>sp|ENDA_THEAC|TRNA-SPLICING endonuclease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FKNEVRILGL 10
+KNEVR + L
Sbjct: 273 YKNEVRYVAL 282


>sp|PELO_THEAC|PROTEIN pelota homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FKNEVRILG 9
F N +RILG
Sbjct: 75 FDNRLRILG 83


>sp|GUAAB_METTH|GMP synthase [glutamine-hydrolyzing] subunit B|Methanothermobacter

Query: 1 FKNEVRILGL 10
+K+EVR +GL
Sbjct: 163 YKDEVREIGL 172


>sp|GUAAB_METMP|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcus

Query: 1 FKNEVRILGL 10
+K+EVR+L +
Sbjct: 165 YKDEVRLLAV 174


>sp|Y1542_METKA|UPF0173 metal-dependent hydrolase MK1542|Methanopyrus kandleri (strain AV19

Query: 1 FKNEVRILGL 10
FK EV LGL
Sbjct: 206 FKREVEELGL 215


>sp|END4_THEAC|PROBABLE endonuclease 4|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FKNEVRILGL 10
FK+EVR G+
Sbjct: 63 FKSEVRKYGI 72


>sp|Y057_METKA|UPF0215 protein MK0057|Methanopyrus kandleri (strain AV19 /

Query: 2 KNEVRILGL 10
K E+R+LG+
Sbjct: 7 KPEIRVLGI 15


>sp|KDGA_SULAC|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FKNEVRILGL 10
F NE+ ILG+
Sbjct: 86 FSNEMDILGV 95


>sp|Y619_METBF|UPF0215 protein Mbar_A0619|Methanosarcina barkeri (strain Fusaro /

Query: 2 KNEVRILGL 10
K E+RILG+
Sbjct: 8 KPEIRILGI 16


>sp|Y1007_METMA|UPF0215 protein MM_1007|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KNEVRILGL 10
K E+RILG+
Sbjct: 8 KPEIRILGI 16


>sp|NAC_SULTO|NASCENT polypeptide-associated complex protein|Sulfurisphaera tokodaii

Query: 1 FKNEVRILGL 10
FKN R+LGL
Sbjct: 8 FKNLERMLGL 17


>sp|CDC61_METTH|ORC1-TYPE DNA replication protein 1|Methanothermobacter thermautotrophicus

Query: 1 FKNEVRILGL 10
F NE+ +LGL
Sbjct: 339 FINELEMLGL 348


>sp|PELO_THEGJ|PROTEIN pelota homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 1 FKNEVRILG 9
F N+VR+ G
Sbjct: 75 FANQVRVTG 83


>sp|NADE_SULTO|NH(3)-DEPENDENT NAD(+) synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FKNEVRILG 9
+K +VR+LG
Sbjct: 170 YKTQVRMLG 178


>sp|PURP_METST|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosphaera stadtmanae (strain ATCC

Query: 1 FKNEVRILGL 10
K+EV +LG+
Sbjct: 218 LKDEVEVLGM 227


>sp|PELO_THEKO|PROTEIN pelota homolog|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FKNEVRILG 9
F N+VR+ G
Sbjct: 75 FANQVRVTG 83


>sp|PELO_THEON|PROTEIN pelota homolog|Thermococcus onnurineus (strain NA1)

Query: 1 FKNEVRILG 9
F N+VR+ G
Sbjct: 75 FANQVRVTG 83


>sp|NADE_SULAC|NH(3)-DEPENDENT NAD(+) synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FKNEVRILG 9
+K +VR+LG
Sbjct: 170 YKTQVRMLG 178


>sp|Y4269_METAC|UPF0215 protein MA_4269|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FKNEVRILGL 10
K E+R+LG+
Sbjct: 7 IKPEIRVLGI 16


>sp|PUS10_CALMQ|TRNA pseudouridine synthase Pus10|Caldivirga maquilingensis (strain ATCC

Query: 4 EVRILGL 10
EVR+LGL
Sbjct: 244 EVRVLGL 250


>sp|NADE_SACS2|NH(3)-DEPENDENT NAD(+) synthetase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FKNEVRILG 9
+K +VR+LG
Sbjct: 169 YKTQVRMLG 177


>sp|Y1505_METJA|PUTATIVE ATP-dependent RNA helicase MJ1505|Methanocaldococcus jannaschii

Query: 1 FKNEVRILGL 10
FK++ ILGL
Sbjct: 155 FKDKCHILGL 164


>sp|CDC6_METST|ORC1-TYPE DNA replication protein|Methanosphaera stadtmanae (strain ATCC

Query: 1 FKNEVRILGL 10
F NE+ +LGL
Sbjct: 340 FINELEMLGL 349


>sp|RIBL_META3|FAD synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 FKNEVRILGL 10
KNE++ LGL
Sbjct: 110 LKNELKKLGL 119




358|SequenceR|1795|1786|MPVLSFKNEV

>sp|Y453_METAC|UNCHARACTERIZED glycosyltransferase MA_0453|Methanosarcina acetivorans (strain ATCC

Query: 1 MPVLSFKNE 9
+PVLSF +E
Sbjct: 295 LPVLSFPDE 303


>sp|Y582_METMA|UNCHARACTERIZED glycosyltransferase MM_0582|Methanosarcina mazei (strain ATCC

Query: 1 MPVLSFKNE 9
+P+LSF +E
Sbjct: 295 LPILSFPDE 303


>sp|HELS_METTH|ATP-DEPENDENT DNA helicase Hel308|Methanothermobacter thermautotrophicus (strain

Query: 1 MPVLSFK 7
MP++SFK
Sbjct: 529 MPLISFK 535


>sp|CS3HD_METJA|CRISPR-ASSOCIATED endonuclease Cas3-HD|Methanocaldococcus jannaschii (strain ATCC

Query: 1 MPVLSFKNE 9
M VL+FKN+
Sbjct: 7 MEVLAFKNQ 15


>sp|Y452_METAC|UNCHARACTERIZED glycosyltransferase MA_0452|Methanosarcina acetivorans (strain ATCC

Query: 1 MPVLSFKNE 9
+P+LSF +E
Sbjct: 295 VPILSFPDE 303


>sp|Y1196_METJA|PUTATIVE amino-acid transporter MJ1196|Methanocaldococcus jannaschii (strain

Query: 1 MPVLSFKNE 9
MP+ +FKN+
Sbjct: 191 MPLSAFKNQ 199


>sp|PRIS_METJA|DNA primase small subunit PriS|Methanocaldococcus jannaschii (strain

Query: 4 LSFKNE 9
LSFKNE
Sbjct: 48 LSFKNE 53


>sp|Y453_ARCFU|UNCHARACTERIZED protein AF_0453|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MPVLSFKNE 9
+P+L+F+N+
Sbjct: 61 IPLLAFRND 69


>sp|ARLY_METVS|ARGININOSUCCINATE lyase|Methanococcus vannielii (strain ATCC 35089

Query: 3 VLSFKNEV 10
VLSFKN++
Sbjct: 451 VLSFKNKM 458




359|SequenceR|1800|1791|LSYHEMPVLS

>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 LSYHEMPVLS 10
LSYHE+ ++S
Sbjct: 72 LSYHELSLMS 81


>sp|IF2P_METHJ|PROBABLE translation initiation factor IF-2|Methanospirillum hungatei JF-1

Query: 1 LSYHEMPVL 9
L+ HE+PV+
Sbjct: 382 LTAHEIPVM 390


>sp|BIOW_METRM|6-CARBOXYHEXANOATE--COA ligase|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 2 SYHEMPVL 9
+YH +P+L
Sbjct: 209 NYHRIPIL 216


>sp|Y1143_METST|PUTATIVE HTH-type transcriptional regulatory protein|Methanosphaera

Query: 4 HEMPVLS 10
HE+PV+S
Sbjct: 97 HEIPVIS 103


>sp|KAE1B_HALWD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 SYHEMP 7
SYH++P
Sbjct: 189 SYHDLP 194


>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LSYHEMPVL 9
+ Y+E+P+L
Sbjct: 59 IKYNEIPIL 67


>sp|Y1499_SULAC|PROBABLE glycosyltransferase Saci_1499|Sulfolobus acidocaldarius (strain

Query: 1 LSYHEMPVLS 10
L Y +PVLS
Sbjct: 40 LKYSNLPVLS 49


>sp|ATGT_METJA|TRNA-GUANINE(15) transglycosylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LSYHEMPVL 9
LS HE+P L
Sbjct: 444 LSQHEIPEL 452


>sp|REP75_PYRAB|REPLICATION initiator protein|Pyrococcus abyssi (strain GE5 /

Query: 1 LSYHEMPVL 9
LSY + P+L
Sbjct: 21 LSYDDQPIL 29


>sp|NNRD_NITMS|ADP-DEPENDENT (S)-NAD(P)H-hydrate dehydratase|Nitrosopumilus maritimus (strain

Query: 3 YHEMPVLS 10
YH P+LS
Sbjct: 39 YHGAPILS 46


>sp|SAT_AERPE|SULFATE adenylyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LSYHEMPV 8
L+YH +P+
Sbjct: 104 LTYHGLPI 111




360|SequenceR|1805|1796|DIVPPLSYHE

>sp|GLCD2_HALTV|GLUCOSE 1-dehydrogenase 2|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 DIVPPLSYHE 10
D+ PP S+HE
Sbjct: 105 DMAPPGSFHE 114


>sp|ARGB_METS3|ACETYLGLUTAMATE kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DIVPPLSYHE 10
DIV +SYH+
Sbjct: 103 DIVSQISYHD 112


>sp|Y329_METJA|UNCHARACTERIZED protein MJ0329|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DIVPPLSY 8
++VPPL Y
Sbjct: 598 ELVPPLGY 605


>sp|ATGT_METJA|TRNA-GUANINE(15) transglycosylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DIVPPLSYHE 10
D V PLS HE
Sbjct: 439 DTVYPLSQHE 448


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina barkeri

Query: 2 IVPPLSYHE 10
IVPP HE
Sbjct: 141 IVPPAIKHE 149


>sp|BIOA_METJA|ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IVPPLSYHE 10
+VPPLS E
Sbjct: 434 LVPPLSITE 442


>sp|DPOL_METVO|DNA polymerase|Methanococcus voltae

Query: 1 DIVPPLSYHE 10
DIVP Y E
Sbjct: 155 DIVPSAKYSE 164




361|SequenceR|1810|1801|EINMKDIVPP

>sp|RSMA_SACS2|PROBABLE ribosomal RNA small subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 INMKDIVPP 10
I +KDI+PP
Sbjct: 112 IQIKDIIPP 120


>sp|T2MW_METWO|TYPE II restriction enzyme MwoI|Methanothermobacter wolfeii

Query: 2 INMKDIVPP 10
IN+KDI+ P
Sbjct: 202 INLKDILTP 210


>sp|PPAC_METTP|MANGANESE-DEPENDENT inorganic pyrophosphatase|Methanothrix thermoacetophila (strain

Query: 1 EINMKDIVPP 10
++ MKD+VP
Sbjct: 30 QLGMKDVVPA 39


>sp|FEN_AERPE|FLAP endonuclease 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 INMKDIVPP 10
+N+++++PP
Sbjct: 3 VNLRELIPP 11


>sp|FEN_STAMF|FLAP endonuclease 1|Staphylothermus marinus (strain ATCC 43588

Query: 2 INMKDIVP 9
+N+KD++P
Sbjct: 3 VNLKDLIP 10


>sp|AATB_METS3|A-TYPE ATP synthase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 1 EINMKDIVPP 10
E+N K I PP
Sbjct: 337 ELNRKGIYPP 346


>sp|DCDA_METJA|DIAMINOPIMELATE decarboxylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 KDIVPP 10
KDIVPP
Sbjct: 430 KDIVPP 435


>sp|NADK_HALMA|NAD kinase|Haloarcula marismortui (strain ATCC 43049

Query: 5 KDIVPP 10
KD+VPP
Sbjct: 249 KDVVPP 254


>sp|TRUD2_METMP|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain DSM

Query: 2 INMKDIV 8
IN+KDIV
Sbjct: 115 INIKDIV 121


>sp|AATB_METM7|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C7 /

Query: 1 EINMKDIVPP 10
E+N K I PP
Sbjct: 337 ELNRKGIYPP 346


>sp|AATB_META3|A-TYPE ATP synthase subunit B|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EINMKDIVPP 10
E+N K I PP
Sbjct: 337 ELNRKGIYPP 346


>sp|TRUD_METM5|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain C5

Query: 2 INMKDIV 8
IN+KDIV
Sbjct: 115 INIKDIV 121


>sp|AATB_METM6|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C6 /

Query: 1 EINMKDIVPP 10
E+N K I PP
Sbjct: 337 ELNRKGIYPP 346


>sp|AATB_METM5|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C5 /

Query: 1 EINMKDIVPP 10
E+N K I PP
Sbjct: 337 ELNRKGIYPP 346


>sp|AATB_METVS|A-TYPE ATP synthase subunit B|Methanococcus vannielii (strain ATCC 35089

Query: 1 EINMKDIVPP 10
E+N K I PP
Sbjct: 337 ELNRKGIYPP 346


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EINMKDIV 8
EIN KDIV
Sbjct: 641 EINDKDIV 648


>sp|Y1382_METJA|UPF0310 protein MJ1382|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 INMKDIVP 9
IN KD++P
Sbjct: 103 INFKDLIP 110


>sp|LYSZ_PYRCJ|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum

Query: 1 EINMKDIVPP 10
++N+K + PP
Sbjct: 135 DVNVKALAPP 144


>sp|AATB_METMP|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain DSM 14266

Query: 1 EINMKDIVPP 10
E+N K + PP
Sbjct: 337 ELNRKGVYPP 346


>sp|SYFA_METJA|PHENYLALANINE--TRNA ligase alpha subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 3 NMKDIVP 9
N+KDI+P
Sbjct: 88 NLKDILP 94


>sp|CH60_METVS|CHAPERONIN GroEL|Methanococcus vannielii (strain ATCC 35089

Query: 3 NMKDIVP 9
NMK+I+P
Sbjct: 227 NMKEILP 233


>sp|FEN_NANEQ|FLAP endonuclease 1|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 INMKDIVPP 10
+N+K+IV P
Sbjct: 3 VNLKEIVDP 11


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 EINMKDIVPP 10
E+N++D++ P
Sbjct: 794 ELNVQDVIVP 803




362|SequenceR|1815|1806|KLQTLEINMK

>sp|Y1210_METJA|UNCHARACTERIZED protein MJ1210|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KLQTLEINMK 10
KL+ +EINM+
Sbjct: 208 KLENIEINME 217


>sp|TRPC_SACS2|INDOLE-3-GLYCEROL phosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LQTLEIN 8
L+TLEIN
Sbjct: 184 LETLEIN 190




363|SequenceR|1820|1811|ITRSLKLQTL

***** No hits found ******


364|SequenceR|1825|1816|LSAQLITRSL

>sp|PSB2_SACI9|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain L.D.8.5 /

Query: 1 LSAQLITRSL 10
++AQLIT+++
Sbjct: 155 IAAQLITKAI 164


>sp|PSB2_SACI7|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LSAQLITRSL 10
++AQLIT+++
Sbjct: 155 IAAQLITKAI 164


>sp|PSB2_SACI6|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LSAQLITRSL 10
++AQLIT+++
Sbjct: 155 IAAQLITKAI 164


>sp|PSB2_SACI4|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LSAQLITRSL 10
++AQLIT+++
Sbjct: 155 IAAQLITKAI 164


>sp|PSB2_SACI3|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain M.16.27)

Query: 1 LSAQLITRSL 10
++AQLIT+++
Sbjct: 155 IAAQLITKAI 164


>sp|PSB2_SACI2|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LSAQLITRSL 10
++AQLIT+++
Sbjct: 155 IAAQLITKAI 164


>sp|PSB1_SACI1|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LSAQLITRSL 10
++AQLIT+++
Sbjct: 155 IAAQLITKAI 164




365|SequenceR|1830|1821|IDNQPLSAQL

***** No hits found ******


366|SequenceR|1835|1826|PKLIEIDNQP

>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 1 PKLIEIDNQP 10
PK+ E+ N P
Sbjct: 198 PKMTEVQNHP 207


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 1 PKLIEIDNQP 10
PK+ E+ N P
Sbjct: 198 PKMTEVQNHP 207


>sp|ENO_METLZ|ENOLASE labreanum (strain ATCC 43576

Query: 1 PKLIEIDN 8
PKLIE+D+
Sbjct: 66 PKLIELDS 73


>sp|CDC6M_HALMA|ORC1-TYPE DNA replication protein 13|Haloarcula marismortui (strain ATCC

Query: 1 PKLIEIDNQP 10
P L+EIDN P
Sbjct: 32 PWLLEIDNVP 41


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 1 PKLIEIDNQP 10
PK++++ N P
Sbjct: 204 PKMVQVGNHP 213


>sp|HDRA_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 1 PKLIEIDNQP 10
PK++ + N P
Sbjct: 200 PKMVSVANHP 209


>sp|SYFB_HALSA|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 700922

Query: 4 IEIDNQP 10
IEID QP
Sbjct: 529 IEIDGQP 535


>sp|SYFB_HALS3|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 29341

Query: 4 IEIDNQP 10
IEID QP
Sbjct: 529 IEIDGQP 535


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 1 PKLIEIDNQ 9
PKLIEI +Q
Sbjct: 928 PKLIEILHQ 936


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PKLIEIDNQP 10
PK I I N+P
Sbjct: 280 PKTIIIQNKP 289


>sp|PUR5_METVS|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 KLIEIDNQ 9
K+IEI NQ
Sbjct: 304 KIIEISNQ 311


>sp|EF2_METM6|ELONGATION factor 2|Methanococcus maripaludis (strain C6 /

Query: 1 PKLIEIDNQ 9
PKLIEI Q
Sbjct: 407 PKLIEILRQ 415


>sp|EF2_METM5|ELONGATION factor 2|Methanococcus maripaludis (strain C5 /

Query: 1 PKLIEIDNQ 9
PKLIEI Q
Sbjct: 407 PKLIEILRQ 415


>sp|ARCS_METJA|ARCHAEOSINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PKLIEID 7
PKLI+ID
Sbjct: 22 PKLIDID 28


>sp|EF2_METMP|ELONGATION factor 2|Methanococcus maripaludis (strain DSM 14266

Query: 1 PKLIEIDNQ 9
PKLIEI Q
Sbjct: 407 PKLIEILRQ 415


>sp|EF2_METM7|ELONGATION factor 2|Methanococcus maripaludis (strain C7 /

Query: 1 PKLIEIDNQ 9
PKLIEI Q
Sbjct: 407 PKLIEILRQ 415


>sp|Y274_METJA|UNCHARACTERIZED protein MJ0274|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PKLIEIDN 8
PK++ IDN
Sbjct: 302 PKVLHIDN 309


>sp|EF2_METVS|ELONGATION factor 2|Methanococcus vannielii (strain ATCC 35089

Query: 1 PKLIEIDNQ 9
PKLIEI Q
Sbjct: 407 PKLIEILRQ 415




367|SequenceR|1840|1831|LLMNVPKLIE

>sp|GLMS_THEKO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Thermococcus kodakarensis (strain

Query: 2 LMNVPKLIE 10
LM VP+L+E
Sbjct: 433 LMKVPELVE 441


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 LMNVPKLIE 10
L N+PKL++
Sbjct: 798 LFNIPKLVK 806


>sp|MDH_METST|MALATE dehydrogenase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 MNVPKLIE 10
++VPKL+E
Sbjct: 205 LDVPKLVE 212


>sp|Y434_METJA|GAMMA-GLUTAMYLCYCLOTRANSFERASE and putative RNase MJ0434|Methanocaldococcus jannaschii (strain

Query: 1 LLMNVPKLIE 10
L+ VPK+IE
Sbjct: 137 LINRVPKMIE 146




368|SequenceR|1845|1836|NRQISLLMNV

***** No hits found ******


369|SequenceR|1850|1841|WAAALNRQIS

>sp|KDXD_HALVD|PROBABLE 2-keto-3-deoxyxylonate dehydratase|Haloferax volcanii (strain

Query: 1 WAAALNRQIS 10
WAA + QIS
Sbjct: 82 WAAGVTYQIS 91


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WAAALNRQIS 10
WA N QIS
Sbjct: 2110 WAMLYNSQIS 2119




370|SequenceR|1855|1846|PIQVYWAAAL

>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 1 PIQVYWAAAL 10
P++ YW AAL
Sbjct: 699 PLKDYWYAAL 708


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 PIQVYWAAAL 10
PI+ YW AL
Sbjct: 693 PIKEYWYKAL 702


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 PIQVYWAAAL 10
PI+ YW AL
Sbjct: 693 PIKEYWYKAL 702


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 PIQVYWAAAL 10
PI+ YW AL
Sbjct: 693 PIKEYWYKAL 702


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 1 PIQVYWAAAL 10
PI+ YW AL
Sbjct: 693 PIKDYWYNAL 702


>sp|MTAD_PYRHO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 QVYWAAAL 10
+VYW A L
Sbjct: 96 EVYWGAKL 103


>sp|AMPD_AERPE|ANHYDROMEVALONATE phosphate decarboxylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PIQVYWAAA 9
P+QV WA A
Sbjct: 363 PMQVEWAIA 371


>sp|PUR1_PYRHO|AMIDOPHOSPHORIBOSYLTRANSFERASE horikoshii (strain ATCC 700860

Query: 2 IQVYWA 7
I VYWA
Sbjct: 256 ISVYWA 261


>sp|COXX2_CENSY|PROTOHEME IX farnesyltransferase 2|Cenarchaeum symbiosum (strain A)

Query: 1 PIQVYWAAAL 10
P+Q WAAA
Sbjct: 120 PVQGAWAAAF 129




371|SequenceR|1860|1851|KIEMGPIQVY

>sp|DHQS_METS3|3-DEHYDROQUINATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KIEMGPIQVY 10
++ GP+Q Y
Sbjct: 250 RVNAGPVQAY 259


>sp|DHQS_METTH|3-DEHYDROQUINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KIEMGPIQVY 10
++ GP+Q Y
Sbjct: 256 RVNAGPVQAY 265


>sp|SYP_PYRHO|PROLINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KIEMGPIQV 9
++E+GPI V
Sbjct: 345 RVEVGPIDV 353


>sp|PUR7_METTH|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 KIEMGPIQV 9
K+EM PI+V
Sbjct: 85 KLEMIPIEV 93


>sp|PUR7_METS3|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KIEMGPIQV 9
K+EM PI+V
Sbjct: 83 KLEMIPIEV 91




372|SequenceR|1865|1856|PKLKGKIEMG

>sp|SFSA_THEAC|SUGAR fermentation stimulation protein homolog|Thermoplasma acidophilum

Query: 1 PKLKGKIEMG 10
PKLK +IE G
Sbjct: 57 PKLKWRIEFG 66


>sp|AGOG_METKA|N-GLYCOSYLASE/DNA lyase|Methanopyrus kandleri (strain AV19 /

Query: 1 PKLKGKIEM 9
PKL G++EM
Sbjct: 231 PKLIGELEM 239


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 PKLKGKIEMG 10
P + GK+ MG
Sbjct: 37 PTVSGKMHMG 46


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PKLKGKIEMG 10
P + GK+ MG
Sbjct: 40 PTVSGKMHMG 49


>sp|ARLY_ARCFU|ARGININOSUCCINATE lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KLKGKIEMG 10
KL+G+++MG
Sbjct: 458 KLRGEVKMG 466


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PKLKGKIEMG 10
P + GK+ MG
Sbjct: 40 PTVSGKMHMG 49


>sp|Y3523_METJA|UNCHARACTERIZED protein MJECL23|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PKLKGKI 7
PK+KGK+
Sbjct: 368 PKVKGKL 374


>sp|PYRC_THEAC|DIHYDROOROTASE acidophilum (strain ATCC 25905

Query: 4 KGKIEMG 10
KGKIE+G
Sbjct: 339 KGKIEIG 345


>sp|HEPT_THECF|PROBABLE ribonuclease HepT|Thermococcus cleftensis (strain DSM 27260

Query: 1 PKLKGKIE 8
P LKGK E
Sbjct: 99 PSLKGKFE 106


>sp|PYRC_THEVO|DIHYDROOROTASE volcanium (strain ATCC 51530

Query: 4 KGKIEMG 10
KGKIE+G
Sbjct: 337 KGKIEVG 343


>sp|G3P_METVS|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PKLKGKI 7
PKL GKI
Sbjct: 204 PKLDGKI 210


>sp|Y426_ARCFU|UNCHARACTERIZED protein AF_0426|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LKGKIEMG 10
L+G+IE+G
Sbjct: 135 LEGRIELG 142




373|SequenceR|1870|1861|LAVQMPKLKG

>sp|Y818_PYRAE|MEMO1 family protein PAE0818|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 AVQMPKLKG 10
A+QMPKL G
Sbjct: 36 ALQMPKLGG 44


>sp|GATE_PYRFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LAVQMPKLKG 10
LA+++PK KG
Sbjct: 308 LAIKLPKFKG 317


>sp|GATE_THEGJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus gammatolerans (strain DSM

Query: 1 LAVQMPKLKG 10
LAV++PK +G
Sbjct: 309 LAVKLPKFRG 318


>sp|GATE_THEKO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus kodakarensis (strain ATCC

Query: 1 LAVQMPKLKG 10
LAV++PK +G
Sbjct: 309 LAVKLPKFRG 318


>sp|GCH3_METVS|GTP cyclohydrolase III|Methanococcus vannielii (strain ATCC 35089

Query: 1 LAVQMPKLK 9
L+VQM KLK
Sbjct: 157 LSVQMTKLK 165


>sp|GCH3_METM7|GTP cyclohydrolase III|Methanococcus maripaludis (strain C7 /

Query: 1 LAVQMPKLK 9
L+VQM KLK
Sbjct: 157 LSVQMTKLK 165


>sp|GCH3_METM6|GTP cyclohydrolase III|Methanococcus maripaludis (strain C6 /

Query: 1 LAVQMPKLK 9
L+VQM KLK
Sbjct: 157 LSVQMTKLK 165


>sp|GATE_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Aeropyrum pernix (strain ATCC 700893

Query: 1 LAVQMPKLKG 10
+AV++P++KG
Sbjct: 310 IAVKLPRMKG 319


>sp|GATE_THESM|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus sibiricus (strain DSM 12597

Query: 1 LAVQMPKLKG 10
LA+++PK +G
Sbjct: 309 LAIKLPKFRG 318


>sp|Y1535_METJA|UNCHARACTERIZED protein MJ1535|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VQMPKLKG 10
+++PK+KG
Sbjct: 125 IELPKIKG 132


>sp|Y062_PYRAR|MEMO1 family protein Pars_0062|Pyrobaculum arsenaticum (strain DSM

Query: 2 AVQMPKL 8
A+QMPKL
Sbjct: 36 ALQMPKL 42


>sp|GATE_PYRHO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus horikoshii (strain ATCC

Query: 1 LAVQMPKLKG 10
LA+++PK +G
Sbjct: 312 LAIKLPKFRG 321


>sp|GATE_PYRAB|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus abyssi (strain GE5 /

Query: 1 LAVQMPKLKG 10
LA+++PK +G
Sbjct: 312 LAIKLPKFRG 321


>sp|SRP19_METM5|SIGNAL recognition particle 19 kDa|Methanococcus maripaludis (strain C5

Query: 1 LAVQMPKLK 9
AVQ PKLK
Sbjct: 27 FAVQNPKLK 35


>sp|CHEB_PYRAB|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Pyrococcus abyssi

Query: 1 LAVQMPKLKG 10
L V+MP++ G
Sbjct: 59 LDVEMPRMNG 68


>sp|CHEB_PYRHO|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Pyrococcus

Query: 1 LAVQMPKLKG 10
L V+MP++ G
Sbjct: 59 LDVEMPRMNG 68


>sp|SYFB_THEVO|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 3 VQMPKLKG 10
+ +PK+KG
Sbjct: 249 ISLPKIKG 256


>sp|SRP19_METM6|SIGNAL recognition particle 19 kDa|Methanococcus maripaludis (strain C6

Query: 1 LAVQMPKLK 9
AVQ PKLK
Sbjct: 27 FAVQSPKLK 35


>sp|SYS_STAMF|SERINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 4 QMPKLKG 10
++PKLKG
Sbjct: 60 EIPKLKG 66


>sp|Y1463_THESM|UPF0127 protein TSIB_1463|Thermococcus sibiricus (strain DSM 12597

Query: 1 LAVQMPKLKG 10
LA PKLKG
Sbjct: 144 LAEPKPKLKG 153




374|SequenceR|1875|1866|LDDESLAVQM

>sp|PDXT_METS3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanobrevibacter smithii

Query: 1 LDDESLAVQ 9
LDDE +A+Q
Sbjct: 155 LDDEIIAIQ 163




375|SequenceR|1880|1871|KMLVTLDDES

***** No hits found ******


376|SequenceR|1885|1876|NELLIKMLVT

>sp|RL30_AERPE|LARGE ribosomal subunit protein uL30|Aeropyrum pernix (strain ATCC 700893

Query: 1 NELLIKML 8
NEL++KML
Sbjct: 152 NELILKML 159


>sp|DAPAT_METJA|LL-DIAMINOPIMELATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NELLIKMLVT 10
NEL+IK T
Sbjct: 266 NELIIKAFAT 275


>sp|RL30_METLZ|LARGE ribosomal subunit protein uL30|Methanocorpusculum labreanum (strain

Query: 1 NELLIKM 7
N+LLIKM
Sbjct: 146 NDLLIKM 152




377|SequenceR|1890|1881|SAEGLNELLI

>sp|THIE_METMP|THIAMINE-PHOSPHATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SAEGLNELL 9
SAE +NEL+
Sbjct: 194 SAENMNELI 202


>sp|THIE_METM6|THIAMINE-PHOSPHATE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 SAEGLNELL 9
SAE +NEL+
Sbjct: 194 SAENMNELI 202


>sp|THIE_METM7|THIAMINE-PHOSPHATE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 SAEGLNELL 9
SAE +NEL+
Sbjct: 194 SAENMNELI 202


>sp|Y771_ARCFU|UNCHARACTERIZED protein AF_0771|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SAEGLNELLI 10
S G NEL+I
Sbjct: 30 SGSGYNELII 39


>sp|PURP_SULTO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfurisphaera tokodaii (strain DSM

Query: 1 SAEGLNELL 9
+ EGLN+LL
Sbjct: 153 AKEGLNKLL 161




378|SequenceR|1895|1886|PSPQSSAEGL

***** No hits found ******


379|SequenceR|1900|1891|QVSQTPSPQS

>sp|COBD_METMP|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 3 SQTPSPQS 10
S+TPSP S
Sbjct: 243 SKTPSPNS 250


>sp|AROE_HALWD|SHIKIMATE dehydrogenase (NADP(+))|Haloquadratum walsbyi (strain DSM 16790

Query: 3 SQTPSPQS 10
+QTP PQS
Sbjct: 195 NQTPVPQS 202


>sp|AROD_METAC|3-DEHYDROQUINATE dehydratase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 SQTPSPQ 9
S+TPSPQ
Sbjct: 138 SKTPSPQ 144


>sp|ALF1_AERPE|PROBABLE fructose-bisphosphate aldolase class 1|Aeropyrum pernix (strain

Query: 3 SQTPSPQ 9
++TPSPQ
Sbjct: 212 ARTPSPQ 218




380|SequenceR|1905|1896|VRVTEQVSQT

***** No hits found ******


381|SequenceR|1910|1901|VDVKRVRVTE

>sp|FLAB2_THEKO|FLAGELLIN B2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VDVKRVRV 8
+D+K+VRV
Sbjct: 94 IDMKKVRV 101


>sp|NUSA_THECE|PROBABLE transcription termination protein NusA|Thermococcus celer

Query: 1 VDVKRVRVTE 10
V VKRV +TE
Sbjct: 89 VKVKRVHITE 98


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 2 DVKRVRVTE 10
D +RVRVTE
Sbjct: 454 DGRRVRVTE 462


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 2 DVKRVRVTE 10
D +RVRVTE
Sbjct: 454 DGRRVRVTE 462


>sp|RL24_PYRCJ|LARGE ribosomal subunit protein uL24|Pyrobaculum calidifontis (strain

Query: 1 VDVKRVRV 8
VD+KRVR+
Sbjct: 70 VDLKRVRI 77


>sp|RL24_ARCFU|LARGE ribosomal subunit protein uL24|Archaeoglobus fulgidus (strain

Query: 1 VDVKRVRVT 9
VD+KR R+T
Sbjct: 71 VDMKRCRIT 79


>sp|ILVD1_METAC|DIHYDROXY-ACID dehydratase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VDVKRVRVTE 10
VD K+VR+ +
Sbjct: 220 VDAKKVRIAK 229


>sp|NUCS_AERPE|ENDONUCLEASE NucS|Aeropyrum pernix (strain ATCC 700893

Query: 1 VDVKRVRVTE 10
V+VKRVR E
Sbjct: 185 VEVKRVRADE 194


>sp|RL24_PYRAE|LARGE ribosomal subunit protein uL24|Pyrobaculum aerophilum (strain

Query: 1 VDVKRVRV 8
VD+KRVR+
Sbjct: 70 VDLKRVRI 77


>sp|ILVD_METMA|DIHYDROXY-ACID dehydratase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VDVKRVRVTE 10
VD K+VR+ +
Sbjct: 220 VDAKKVRIAK 229


>sp|FLAB3_THEKO|FLAGELLIN B3|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VDVKRVRV 8
+D+K+VRV
Sbjct: 95 IDMKKVRV 102


>sp|QUED_ARCFU|PUTATIVE 6-carboxy-5,6,7,8-tetrahydropterin synthase|Archaeoglobus fulgidus

Query: 1 VDVKRVRVTE 10
++V+RVRV E
Sbjct: 96 LNVRRVRVAE 105


>sp|IF2A_PYRAE|TRANSLATION initiation factor 2 subunit|Pyrobaculum aerophilum (strain ATCC

Query: 1 VDVKRVRVTE 10
V +KRVRV E
Sbjct: 79 VSLKRVRVDE 88




382|SequenceR|1915|1906|DPVSSVDVKR

>sp|WTPC_ARCFU|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Archaeoglobus fulgidus (strain ATCC

Query: 1 DPVSSVDVK 9
+P+S+VD+K
Sbjct: 152 EPLSAVDLK 160


>sp|WTPC_METJA|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Methanocaldococcus jannaschii

Query: 1 DPVSSVDVK 9
+P S+VD+K
Sbjct: 155 EPTSAVDIK 163


>sp|TOP6A_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 DPVSSVDVKR 10
DP+ VDV R
Sbjct: 287 DPLKDVDVVR 296


>sp|AROC_PYRCJ|CHORISMATE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PVSSVDVKR 10
P+S DVKR
Sbjct: 33 PLSEEDVKR 41




383|SequenceR|1920|1911|QEKLHDPVSS

>sp|GSA_METBF|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QEKLHDPVSS 10
QEK+H+ V+S
Sbjct: 320 QEKIHEKVNS 329


>sp|SYFB_METS5|PHENYLALANINE--TRNA ligase beta subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 QEKLHDPV 8
QEKLHD +
Sbjct: 118 QEKLHDTI 125


>sp|SYFB_AERPE|PHENYLALANINE--TRNA ligase beta subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 QEKLHD 6
QEKLHD
Sbjct: 117 QEKLHD 122


>sp|OTC_THEKO|ORNITHINE carbamoyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 EKLHDPVSS 10
E LHDPV +
Sbjct: 212 ELLHDPVQA 220


>sp|MCRAM_METJA|[METHYL coenzyme M reductase]-L-arginine

Query: 4 LHDPVS 9
LHDPV+
Sbjct: 262 LHDPVA 267


>sp|OTC_PYRHO|ORNITHINE carbamoyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EKLHDPVSS 10
E LHDPV +
Sbjct: 212 ELLHDPVKA 220


>sp|OTCA_PYRFU|ORNITHINE carbamoyltransferase, anabolic|Pyrococcus furiosus (strain ATCC

Query: 2 EKLHDPVSS 10
E LHDPV +
Sbjct: 212 ELLHDPVKA 220


>sp|OTC_PYRAB|ORNITHINE carbamoyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 EKLHDPVSS 10
E LHDPV +
Sbjct: 212 ELLHDPVKA 220


>sp|DPOL2_SACS2|DNA polymerase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EKLHDPVSS 10
E+LH P+ S
Sbjct: 24 ERLHSPILS 32


>sp|RPO5_METBF|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanosarcina barkeri (strain Fusaro

Query: 3 KLHDPV 8
K+HDPV
Sbjct: 41 KVHDPV 46


>sp|SYFB_KORCO|PHENYLALANINE--TRNA ligase beta subunit|Korarchaeum cryptofilum (strain OPF8)

Query: 1 QEKLHD 6
QEK+HD
Sbjct: 120 QEKIHD 125




384|SequenceR|1925|1916|DTWDEQEKLH

>sp|ARCSA_METAC|ARCHAEOSINE synthase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 3 WDEQEK 8
WDE+EK
Sbjct: 398 WDEEEK 403


>sp|RNZ_PYRFU|RIBONUCLEASE Z|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DTWDEQEKLH 10
+ WD +E LH
Sbjct: 78 NLWDRRETLH 87


>sp|RNZ_THEKO|RIBONUCLEASE Z|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DTWDEQEKLH 10
+ WD Q+ LH
Sbjct: 78 NLWDRQKPLH 87


>sp|TOP6A_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 1 DTWDEQEK 8
+TWDEQ++
Sbjct: 126 NTWDEQKE 133


>sp|TOP6A_SACSH|TYPE 2 DNA topoisomerase 6|Saccharolobus shibatae (strain ATCC 51178

Query: 1 DTWDEQEK 8
+TWDEQ++
Sbjct: 127 NTWDEQKE 134


>sp|COABC_THEKO|COENZYME A biosynthesis bifunctional protein|Thermococcus kodakarensis

Query: 3 WDEQEKL 9
WDE EK+
Sbjct: 396 WDEIEKM 402


>sp|TRKA_ARCFU|TRK system potassium uptake protein|Archaeoglobus fulgidus (strain ATCC

Query: 3 WDEQEKL 9
WDE EK+
Sbjct: 425 WDEIEKI 431


>sp|IDI2_METMP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DTWDEQ 6
D+WDE+
Sbjct: 134 DSWDEE 139


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 WDEQEK 8
WDE+EK
Sbjct: 311 WDEKEK 316


>sp|TOP6A_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DTWDEQEK 8
+TWDEQ++
Sbjct: 125 NTWDEQKE 132


>sp|GSA_METBF|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina barkeri (strain Fusaro /

Query: 5 EQEKLH 10
EQEK+H
Sbjct: 319 EQEKIH 324


>sp|AGL16_SULAC|ARCHAEAL glycosylation protein 16|Sulfolobus acidocaldarius (strain ATCC

Query: 1 DTWDEQEKL 9
DT+ E+EKL
Sbjct: 43 DTYTEREKL 51


>sp|TOP6A_HYPBU|TYPE 2 DNA topoisomerase 6|Hyperthermus butylicus (strain DSM 5456

Query: 1 DTWDEQEK 8
+TWDEQ +
Sbjct: 125 NTWDEQRE 132


>sp|SYS_NITMS|SERINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 DTWDEQEKL 9
D+W E EK+
Sbjct: 292 DSWKEHEKM 300


>sp|ARGD_ARCFU|ACETYLORNITHINE aminotransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WDEQEKLH 10
W E+EK H
Sbjct: 3 WIEREKKH 10


>sp|COBQ_THEAC|PROBABLE cobyric acid synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 TWDEQEKLH 10
TW+E ++H
Sbjct: 373 TWEEGYEIH 381


>sp|GLYA_METKA|SERINE hydroxymethyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 3 WDEQEKLH 10
WD++ K H
Sbjct: 346 WDDESKSH 353


>sp|SYC_METMP|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 TWDEQEKL 9
TWDE E L
Sbjct: 337 TWDENEFL 344


>sp|SYFB_ARCFU|PHENYLALANINE--TRNA ligase beta subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WDEQEKL 9
WDE E+L
Sbjct: 8 WDELERL 14




385|SequenceR|1930|1921|MSLKSDTWDE

>sp|SYG_THESM|GLYCINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 5 SDTWD 9
SDTWD
Sbjct: 308 SDTWD 312


>sp|SQRD_ACIAM|SULFIDE-QUINONE reductase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 MSLKSDTW 8
+S+K DTW
Sbjct: 361 VSVKDDTW 368


>sp|COMB_THEAC|PROBABLE 2-phosphosulfolactate phosphatase|Thermoplasma acidophilum

Query: 4 KSDTWDE 10
KSD+W E
Sbjct: 9 KSDSWAE 15


>sp|MUTL_METTP|DNA mismatch repair protein MutL|Methanothrix thermoacetophila (strain

Query: 5 SDTWDE 10
S+TWD+
Sbjct: 203 SETWDD 208


>sp|Y249_PYRAB|PUTATIVE GTPase PYRAB02490|Pyrococcus abyssi (strain GE5 /

Query: 1 MSLKSDTWDE 10
+ L+SD W E
Sbjct: 209 LDLESDKWRE 218


>sp|PRIS_METM6|DNA primase small subunit PriS|Methanococcus maripaludis (strain C6 /

Query: 1 MSLKSDTWDE 10
++LK DT+D
Sbjct: 324 LTLKGDTFDH 333


>sp|PRIS_METM7|DNA primase small subunit PriS|Methanococcus maripaludis (strain C7 /

Query: 1 MSLKSDTWDE 10
++LK DT+D
Sbjct: 330 LTLKGDTFDH 339


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 SLKSDTWD 9
+L+S+TWD
Sbjct: 514 NLESETWD 521


>sp|PRIS_METMP|DNA primase small subunit PriS|Methanococcus maripaludis (strain DSM

Query: 1 MSLKSDTWDE 10
++LK DT+D
Sbjct: 324 LTLKGDTFDH 333


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 3 LKSDTWD 9
LK D WD
Sbjct: 14 LKGDFWD 20




386|SequenceR|1935|1926|SVIQNMSLKS

>sp|FWDC_METJA|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanocaldococcus

Query: 2 VIQNMSLK 9
VI+NMSL+
Sbjct: 25 VIENMSLE 32




387|SequenceR|1940|1931|FDFQLSVIQN

>sp|PYRG_SACS2|CTP synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FDFQLSVIQ 9
F FQLS+++
Sbjct: 387 FGFQLSIVE 395


>sp|ASPD_NITMS|L-ASPARTATE dehydrogenase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 DFQLSVIQN 10
D LSVIQN
Sbjct: 79 DVALSVIQN 87


>sp|PURK_SACS2|N5-CARBOXYAMINOIMIDAZOLE ribonucleotide synthase|Saccharolobus solfataricus (strain ATCC

Query: 1 FDFQLSVI 8
FDF+ S+I
Sbjct: 182 FDFEASII 189




388|SequenceR|1945|1936|LSEFHFDFQL

***** No hits found ******


389|SequenceR|1950|1941|YLIISLSEFH

>sp|RL18_SULAC|LARGE ribosomal subunit protein uL18|Sulfolobus acidocaldarius (strain

Query: 1 YLIISLSEF 9
Y+I+S+S+F
Sbjct: 43 YVIVSVSKF 51




390|SequenceR|1955|1946|NIDNNYLIIS

>sp|RL14E_PYRNV|LARGE ribosomal subunit protein eL14|Pyrobaculum neutrophilum (strain

Query: 2 IDNNYLIIS 10
+D NY++I+
Sbjct: 29 VDENYVVIT 37


>sp|RL14E_PYRIL|LARGE ribosomal subunit protein eL14|Pyrobaculum islandicum (strain DSM

Query: 2 IDNNYLIIS 10
+D NY++I+
Sbjct: 29 VDENYVVIT 37


>sp|RL14E_PYRCJ|LARGE ribosomal subunit protein eL14|Pyrobaculum calidifontis (strain

Query: 2 IDNNYLIIS 10
+D NY++I+
Sbjct: 29 VDENYVVIT 37


>sp|RL14E_PYRAE|LARGE ribosomal subunit protein eL14|Pyrobaculum aerophilum (strain

Query: 2 IDNNYLIIS 10
+D NY++I+
Sbjct: 29 VDENYVVIT 37


>sp|FDHB_METJA|F420-DEPENDENT formate dehydrogenase subunit beta|Methanocaldococcus jannaschii

Query: 1 NIDNNYLI 8
N+DN Y+I
Sbjct: 111 NLDNVYMI 118


>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 1 NIDNNYLI 8
N+DN Y+I
Sbjct: 113 NLDNVYMI 120


>sp|RPO11_NANEQ|DNA-DIRECTED RNA polymerase subunit Rpo11|Nanoarchaeum equitans (strain

Query: 3 DNNYLIIS 10
DNNY II
Sbjct: 56 DNNYFIIE 63


>sp|COOS_ARCFU|CARBON monoxide dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NIDNNYLIIS 10
N+D+NY+ ++
Sbjct: 194 NVDSNYVSLA 203


>sp|TOP3_SACS2|DNA topoisomerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NIDNNYLIIS 10
N++N YLII+
Sbjct: 5 NVNNYYLIIA 14


>sp|Y2683_SACI3|UPF0248 protein M1627_2683|Saccharolobus islandicus (strain M.16.27)

Query: 1 NIDNNYL 7
++DNNYL
Sbjct: 44 DVDNNYL 50


>sp|Y2629_SACI4|UPF0248 protein M1425_2629|Saccharolobus islandicus (strain M.14.25 /

Query: 1 NIDNNYL 7
++DNNYL
Sbjct: 44 DVDNNYL 50


>sp|Y2614_SACI6|UPF0248 protein M164_2614|Saccharolobus islandicus (strain M.16.4 /

Query: 1 NIDNNYL 7
++DNNYL
Sbjct: 44 DVDNNYL 50


>sp|Y2990_SACI1|UPF0248 protein YN1551_2990|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 IDNNYLIIS 10
+DNNYL +
Sbjct: 45 VDNNYLYLK 53


>sp|Y2801_SACI7|UPF0248 protein YG5714_2801|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 IDNNYLIIS 10
+DNNYL +
Sbjct: 45 VDNNYLYLK 53


>sp|Y2790_SACI2|UPF0248 protein LS215_2790|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 IDNNYLIIS 10
+DNNYL +
Sbjct: 45 VDNNYLYLK 53




391|SequenceR|1960|1951|VGSEQNIDNN

>sp|UDDP_SULAC|UNDECAPRENYL-DIPHOSPHATASE acidocaldarius (strain ATCC 33909

Query: 1 VGSEQNIDNN 10
+G EQNI N
Sbjct: 23 IGGEQNIGFN 32


>sp|FLGA2_HALVD|FLAGELLIN A2|Haloferax volcanii (strain ATCC 29605

Query: 1 VGSEQNIDN 9
VG E++IDN
Sbjct: 70 VGGEEDIDN 78


>sp|Y33A_METJA|UNCHARACTERIZED protein MJ0332.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGSEQNIDNN 10
VGS++ DN+
Sbjct: 81 VGSDETTDNS 90




392|SequenceR|1965|1956|DNHFAVGSEQ

>sp|DAPF_METMP|DIAMINOPIMELATE epimerase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DNHFAVGSE 9
D HF +GS+
Sbjct: 35 DRHFGIGSD 43


>sp|DAPF_METM6|DIAMINOPIMELATE epimerase|Methanococcus maripaludis (strain C6 /

Query: 1 DNHFAVGSE 9
D HF +GS+
Sbjct: 35 DRHFGIGSD 43


>sp|DAPF_METM5|DIAMINOPIMELATE epimerase|Methanococcus maripaludis (strain C5 /

Query: 1 DNHFAVGSE 9
D HF +GS+
Sbjct: 35 DRHFGIGSD 43


>sp|DAPF_METM7|DIAMINOPIMELATE epimerase|Methanococcus maripaludis (strain C7 /

Query: 1 DNHFAVGSE 9
D HF +GS+
Sbjct: 35 DRHFGIGSD 43


>sp|MCH_METLZ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 DNHFAVGS 8
DN FA+GS
Sbjct: 102 DNFFAMGS 109


>sp|Y1590_CALMQ|MEMO1 family protein Cmaq_1590|Caldivirga maquilingensis (strain ATCC

Query: 2 NHFAVGS 8
NH+ VGS
Sbjct: 86 NHYGVGS 92


>sp|PSB2_SACI9|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain L.D.8.5 /

Query: 1 DNHFAVGS 8
DN+ AVGS
Sbjct: 127 DNYAAVGS 134


>sp|PSB2_SACI7|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 DNHFAVGS 8
DN+ AVGS
Sbjct: 127 DNYAAVGS 134


>sp|PSB2_SACI6|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain M.16.4 /

Query: 1 DNHFAVGS 8
DN+ AVGS
Sbjct: 127 DNYAAVGS 134


>sp|PSB2_SACI4|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DNHFAVGS 8
DN+ AVGS
Sbjct: 127 DNYAAVGS 134


>sp|PSB2_SACI3|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain M.16.27)

Query: 1 DNHFAVGS 8
DN+ AVGS
Sbjct: 127 DNYAAVGS 134


>sp|PSB2_SACI2|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 DNHFAVGS 8
DN+ AVGS
Sbjct: 127 DNYAAVGS 134


>sp|PSB1_SULTO|PROTEASOME subunit beta 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DNHFAVGS 8
DN+ AVGS
Sbjct: 127 DNYAAVGS 134


>sp|PSB1_SACS9|PROTEASOME subunit beta 1|Saccharolobus solfataricus (strain 98/2) (Sulfolobus

Query: 1 DNHFAVGS 8
DN+ AVGS
Sbjct: 127 DNYAAVGS 134


>sp|PSB1_SACS2|PROTEASOME subunit beta 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DNHFAVGS 8
DN+ AVGS
Sbjct: 127 DNYAAVGS 134


>sp|PSB1_SACI1|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 DNHFAVGS 8
DN+ AVGS
Sbjct: 127 DNYAAVGS 134


>sp|COPP_THEVO|BIFUNCTIONAL phosphopantetheine adenylyltransferase/NTP phosphatase|Thermoplasma

Query: 1 DNHFAVGSE 9
DN +A+G E
Sbjct: 211 DNDYAIGIE 219


>sp|TRPB_HALVD|TRYPTOPHAN synthase beta chain|Haloferax volcanii (strain ATCC 29605

Query: 1 DNHFAVGS 8
D H+ +GS
Sbjct: 183 DTHYVIGS 190




393|SequenceR|1970|1961|GLQFSDNHFA

>sp|GATA_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcoides burtonii (strain DSM

Query: 1 GLQFSDNHF 9
GLQ NHF
Sbjct: 440 GLQIIGNHF 448


>sp|COFE_HALLT|COENZYME F420:L-glutamate ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 SDNHF 9
SDNHF
Sbjct: 228 SDNHF 232


>sp|CMR1_SACS2|CRISPR system CMR subunit Cmr1|Saccharolobus solfataricus (strain ATCC

Query: 5 SDNHF 9
SDNHF
Sbjct: 94 SDNHF 98




394|SequenceR|1975|1966|HLRLEGLQFS

>sp|SYM_PICTO|METHIONINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 HLRLEGLQFS 10
+LR EG QFS
Sbjct: 326 YLRFEGAQFS 335


>sp|TYW3_AERPE|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 HLRLEGLQ 8
HLR+EG Q
Sbjct: 94 HLRVEGWQ 101


>sp|PCNA_HALSA|DNA polymerase sliding clamp|Halobacterium salinarum (strain ATCC

Query: 1 HLRLEGLQFS 10
H++++GL+++
Sbjct: 98 HIQIDGLEYT 107


>sp|PCNA_HALS3|DNA polymerase sliding clamp|Halobacterium salinarum (strain ATCC 29341

Query: 1 HLRLEGLQFS 10
H++++GL+++
Sbjct: 98 HIQIDGLEYT 107


>sp|TRPG_THEKO|ANTHRANILATE synthase component 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LRLEGLQF 9
L +EGLQF
Sbjct: 157 LPIEGLQF 164


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 HLRLEGLQFS 10
+L LEG +FS
Sbjct: 338 YLNLEGKKFS 347


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HLRLEGLQFS 10
+L LEG +FS
Sbjct: 338 YLNLEGKKFS 347




395|SequenceR|1980|1971|SSAMLHLRLE

***** No hits found ******


396|SequenceR|1985|1976|KFMKGSSAML

***** No hits found ******


397|SequenceR|1990|1981|NMSGDKFMKG

>sp|RS19_PYRAE|SMALL ribosomal subunit protein uS19|Pyrobaculum aerophilum (strain

Query: 1 NMSGDKFMK 9
NMS D+F+K
Sbjct: 41 NMSMDEFIK 49


>sp|PCKG_THEVO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma volcanium (strain ATCC 51530

Query: 4 GDKFMKG 10
GD+F+KG
Sbjct: 165 GDRFIKG 171


>sp|RS4E_METJA|SMALL ribosomal subunit protein eS4|Methanocaldococcus jannaschii (strain

Query: 1 NMSGDKF 7
NM G+KF
Sbjct: 219 NMDGEKF 225


>sp|NTPPA_PYRFU|DTTP/UTP pyrophosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 MSGDKFMKG 10
+SGDK ++G
Sbjct: 108 ISGDKIIEG 116


>sp|GLMM_METJA|PHOSPHOGLUCOSAMINE mutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NMSGDKFM 8
NMSGD ++
Sbjct: 220 NMSGDNYI 227


>sp|PSB_METMA|PROTEASOME subunit beta|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 MSGDKFMKG 10
M DK++KG
Sbjct: 1 MDNDKYLKG 9


>sp|PSB_METBF|PROTEASOME subunit beta|Methanosarcina barkeri (strain Fusaro /

Query: 2 MSGDKFMKG 10
M DK++KG
Sbjct: 1 MDNDKYLKG 9




398|SequenceR|1995|1986|LKVSVNMSGD

>sp|PYRDB_THEKO|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Thermococcus kodakarensis

Query: 2 KVSVNMSG 9
K+S+N+SG
Sbjct: 5 KLSINLSG 12


>sp|APE2_SACS2|LEUCYL aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LKVSVNMSG 9
LKV+VN +G
Sbjct: 487 LKVNVNRTG 495




399|SequenceR|2000|1991|LTCTKLKVSV

>sp|Y1276_ARCFU|UNCHARACTERIZED protein AF_1276|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LTCTKLKVSV 10
L C+K+KV V
Sbjct: 69 LNCSKVKVEV 78




400|SequenceR|2005|1996|ERLDDLTCTK

>sp|ILVD_METMA|DIHYDROXY-ACID dehydratase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ERLDDLTC 8
ERL++L+C
Sbjct: 178 ERLENLSC 185


>sp|MUTS2_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 ERLDDLTCTK 10
ERLDDL T+
Sbjct: 445 ERLDDLRATE 454


>sp|MUTS2_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 ERLDDLTCTK 10
ERLDDL T+
Sbjct: 445 ERLDDLRATE 454


>sp|SPSS_METJA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RLDDLTC 8
RLD++TC
Sbjct: 51 RLDEVTC 57


>sp|Y1288_METJA|UNCHARACTERIZED protein MJ1288|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ERLDDLTCT 9
E L+D++CT
Sbjct: 168 ENLEDISCT 176


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 1 ERLDDLTCT 9
E ++D+TCT
Sbjct: 353 EVMEDVTCT 361


>sp|THIC_NATPD|PHOSPHOMETHYLPYRIMIDINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ERLDDLTC 8
E+LDD+ C
Sbjct: 459 EKLDDIPC 466


>sp|PYRB_CALMQ|ASPARTATE carbamoyltransferase catalytic subunit|Caldivirga maquilingensis

Query: 2 RLDDLT 7
RLDDLT
Sbjct: 150 RLDDLT 155


>sp|Y912_METMA|UPF0288 protein MM_0912|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ERLDDLTCT 9
ER+ + TCT
Sbjct: 188 ERITEKTCT 196


>sp|MUTS_NATPD|DNA mismatch repair protein MutS|Natronomonas pharaonis (strain ATCC

Query: 1 ERLDDLTCTK 10
ERLD+L T+
Sbjct: 442 ERLDELRATE 451


Query: 1 ERLDDLTCTK 10
ERLDD T +
Sbjct: 406 ERLDDCTAVR 415


>sp|Y1170_METST|PUTATIVE nickel insertion protein|Methanosphaera stadtmanae (strain ATCC

Query: 1 ERLDDLT 7
E+LDD+T
Sbjct: 79 EKLDDIT 85


>sp|DMSR_HALVD|DIMETHYL sulfoxide reductase transcriptional activator|Haloferax volcanii

Query: 1 ERLDDLT 7
ERLD+LT
Sbjct: 120 ERLDELT 126




401|SequenceR|2010|2001|AREIGERLDD

>sp|RNH2_THEKO|RIBONUCLEASE HII|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 AREIGERLD 9
ARE+GERL+
Sbjct: 115 ARELGERLN 123


>sp|HMGCS_CALMQ|HYDROXYMETHYLGLUTARYL-COA synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 AREIGERLDD 10
AR IGE L+D
Sbjct: 319 ARTIGEMLED 328


>sp|DHYS_HALSA|PROBABLE deoxyhypusine synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 AREIGERLDD 10
ARE+G LDD
Sbjct: 175 ARELGATLDD 184


>sp|DHYS_HALS3|PROBABLE deoxyhypusine synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 AREIGERLDD 10
ARE+G LDD
Sbjct: 175 ARELGATLDD 184


>sp|GATA_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 4 IGERLDD 10
IGER+DD
Sbjct: 408 IGERVDD 414


>sp|Y988_METJA|UNCHARACTERIZED protein MJ0988|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EIGERLD 9
EIGER+D
Sbjct: 61 EIGERVD 67


>sp|HTR9_HALSA|HALOBACTERIAL transducer protein 9|Halobacterium salinarum (strain ATCC 700922

Query: 3 EIGERLDD 10
+IGERL+D
Sbjct: 57 DIGERLND 64


>sp|DHYS_METTE|PROBABLE deoxyhypusine synthase|Methanosarcina thermophila

Query: 3 EIGERLDD 10
EIG+ LDD
Sbjct: 165 EIGKNLDD 172


>sp|DHYS1_METMA|PROBABLE deoxyhypusine synthase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 EIGERLDD 10
EIG+ LDD
Sbjct: 165 EIGKNLDD 172


>sp|SRP54_THEON|SIGNAL recognition particle 54 kDa|Thermococcus onnurineus (strain NA1)

Query: 4 IGERLDD 10
+GER+DD
Sbjct: 274 VGERIDD 280


>sp|Y963_METKA|MEMO1 family protein MK0963|Methanopyrus kandleri (strain AV19 /

Query: 1 AREIGERLDD 10
ARE+GE + D
Sbjct: 168 AREVGEAIVD 177


>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain Fusaro

Query: 1 AREIGERLDD 10
A+E GERL +
Sbjct: 220 AKEAGERLKN 229


>sp|K6PF_THEZI|ADP-SPECIFIC phosphofructokinase|Thermococcus zilligii

Query: 3 EIGERLD 9
EIGER+D
Sbjct: 217 EIGERVD 223


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 1 AREIGERLDD 10
A++IGERL +
Sbjct: 1183 AKKIGERLKE 1192


>sp|GSA_PYRCJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 REIGERL 8
RE+G+RL
Sbjct: 200 REVGDRL 206


>sp|DHYS1_METAC|PROBABLE deoxyhypusine synthase 1|Methanosarcina acetivorans (strain ATCC

Query: 3 EIGERLDD 10
EIG+ LDD
Sbjct: 165 EIGKNLDD 172


>sp|HEM3_METAC|PROBABLE porphobilinogen deaminase|Methanosarcina acetivorans (strain ATCC

Query: 1 AREIGERL 8
ARE+G RL
Sbjct: 281 ARELGHRL 288


>sp|Y1165_HALMA|UPF0212 protein rrnAC1165|Haloarcula marismortui (strain ATCC 43049

Query: 2 REIGERLDD 10
+EIG+RL++
Sbjct: 92 KEIGQRLEN 100


>sp|THPR_AERPE|RNA 2',3'-cyclic phosphodiesterase|Aeropyrum pernix (strain ATCC

Query: 1 AREIGERL 8
A EIGERL
Sbjct: 42 AAEIGERL 49


>sp|SYTC_SULTO|THREONINE--TRNA ligase catalytic subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 REIGERLD 9
R IGERLD
Sbjct: 136 RIIGERLD 143


>sp|HEM3_METMA|PROBABLE porphobilinogen deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AREIGERL 8
ARE+G RL
Sbjct: 281 ARELGHRL 288


>sp|SUCC_IGNH4|SUCCINATE--COA ligase [ADP-forming] subunit beta|Ignicoccus hospitalis (strain

Query: 1 AREIGERL 8
ARE+G+R+
Sbjct: 152 AREVGKRI 159


>sp|GSA_PYRAE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 REIGERL 8
RE+G+RL
Sbjct: 185 REVGDRL 191


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 1 AREIGERL 8
AREI ER+
Sbjct: 685 AREIAERI 692


>sp|PURA_NATPD|ADENYLOSUCCINATE synthetase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 REIGERLDD 10
RE G RLD+
Sbjct: 197 REFGRRLDE 205


>sp|AROA_HALLT|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 3 EIGERLDD 10
E GER DD
Sbjct: 64 ESGERFDD 71




402|SequenceR|2015|2006|IMRSTAREIG

>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 MRSTAREIG 10
+RS A+EIG
Sbjct: 39 LRSRAKEIG 47


>sp|MTAP_HYPBU|S-METHYL-5'-THIOADENOSINE phosphorylase|Hyperthermus butylicus (strain DSM 5456

Query: 4 STAREIG 10
STARE+G
Sbjct: 151 STARELG 157




403|SequenceR|2020|2011|DNKRDIMRST

>sp|IF2P_METS5|PROBABLE translation initiation factor IF-2|Metallosphaera sedula (strain

Query: 1 DNKRDIMRST 10
DNK++I R+T
Sbjct: 516 DNKKNIERAT 525


>sp|PRIS_PYRAB|DNA primase small subunit PriS|Pyrococcus abyssi (strain GE5 /

Query: 1 DNKRDIMR 8
+N+RD+MR
Sbjct: 310 NNERDVMR 317


>sp|PRIS_PYRHO|DNA primase small subunit PriS|Pyrococcus horikoshii (strain ATCC

Query: 2 NKRDIMR 8
N+RD+MR
Sbjct: 311 NERDVMR 317


>sp|EI2BL_PYRHO|PUTATIVE translation initiation factor eIF-2B|Pyrococcus horikoshii

Query: 2 NKRDIMRS 9
N+RDI++S
Sbjct: 76 NRRDILKS 83


>sp|ARLY_METAR|ARGININOSUCCINATE lyase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DNKRDIMR 8
+NK DI+R
Sbjct: 2 ENKEDILR 9




404|SequenceR|2025|2016|SNNDQDNKRD

>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 1 SNNDQDNK 8
S N+QDN+
Sbjct: 125 SQNEQDNR 132


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter thermautotrophicus

Query: 1 SNNDQDNK 8
S N+QDN+
Sbjct: 125 SQNEQDNR 132


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 1 SNNDQDNK 8
S N+QDN+
Sbjct: 128 SQNEQDNR 135




405|SequenceR|2030|2021|IDIMSSNNDQ

>sp|DNAG_THEGJ|DNA primase DnaG|Thermococcus gammatolerans (strain DSM 15229

Query: 1 IDIMSSNN 8
IDI+S NN
Sbjct: 417 IDIVSENN 424


>sp|Y1268_SULTO|PUTATIVE HTH-type transcriptional regulatory protein|Sulfurisphaera tokodaii

Query: 1 IDIMSSNNDQ 10
+DI++S ND+
Sbjct: 221 VDIIASKNDK 230


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 IDIMSSNND 9
IDI++ NN+
Sbjct: 630 IDIINENNE 638


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 IDIMSSNND 9
IDI++ NN+
Sbjct: 633 IDIINENNE 641


>sp|KPTA_THEVO|PROBABLE RNA 2'-phosphotransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IDIMSSNND 9
IDI SN+D
Sbjct: 186 IDIFRSNDD 194


>sp|CH60_METHJ|CHAPERONIN GroEL|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 IDIMSSNNDQ 10
I I+S+NND+
Sbjct: 146 IAIISANNDE 155




406|SequenceR|2035|2026|DQKYSIDIMS

>sp|MFNA_METTH|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanothermobacter

Query: 1 DQKYSIDIMS 10
DQ Y +D+ S
Sbjct: 118 DQDYRVDVES 127


>sp|RFCL_PYRFU|REPLICATION factor C large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KYSIDIMS 10
KY+ID+M+
Sbjct: 300 KYAIDMMT 307


>sp|SYTC_AERPE|THREONINE--TRNA ligase catalytic subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 DQKYSIDIM 9
++KY IDI+
Sbjct: 240 NEKYGIDIV 248


>sp|ASNH1_METJA|PUTATIVE asparagine synthetase [glutamine-hydrolyzing]

Query: 3 KYSIDIM 9
KYSID+M
Sbjct: 17 KYSIDMM 23


>sp|RFCL_PYRHO|REPLICATION factor C large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KYSIDIMS 10
KY+ID+M+
Sbjct: 300 KYAIDMMT 307


>sp|AGL12_HALVD|LOW-SALT glycan biosynthesis protein Agl12|Haloferax volcanii (strain ATCC

Query: 1 DQKYSID 7
DQ+Y+ID
Sbjct: 273 DQRYAID 279


>sp|FEN_METMA|FLAP endonuclease 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DQKYSIDIM 9
D KY +DIM
Sbjct: 134 DSKYLLDIM 142


>sp|KCY_METBU|CYTIDYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 2 QKYSIDIMS 10
+ YS+DI+S
Sbjct: 22 EHYSVDIIS 30




407|SequenceR|2040|2031|QSGNKDQKYS

***** No hits found ******


408|SequenceR|2045|2036|LVADIQSGNK

>sp|AATA_METAC|A-TYPE ATP synthase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 2 VADIQSGN 9
VADI+SGN
Sbjct: 158 VADIKSGN 165


>sp|Y3270_HALS3|UNCHARACTERIZED solute-binding protein OE_3270R|Halobacterium salinarum (strain

Query: 1 LVADIQSGN 9
L+AD+++GN
Sbjct: 193 LLADVETGN 201


>sp|Y1595_HALSA|UNCHARACTERIZED solute-binding protein VNG_1595C|Halobacterium salinarum (strain

Query: 1 LVADIQSGN 9
L+AD+++GN
Sbjct: 193 LLADVETGN 201


>sp|AATA_METBF|A-TYPE ATP synthase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 2 VADIQSGN 9
++DI+SGN
Sbjct: 158 ISDIKSGN 165


>sp|THIC_META3|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 VADIQSGNK 10
VAD+ GNK
Sbjct: 354 VADVAKGNK 362


>sp|AATA_METBA|A-TYPE ATP synthase subunit A|Methanosarcina barkeri

Query: 2 VADIQSGN 9
++DI+SGN
Sbjct: 158 ISDIKSGN 165


>sp|AATA_METMA|A-TYPE ATP synthase subunit A|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VADIQSGN 9
VADI+SG+
Sbjct: 158 VADIKSGS 165


>sp|RS19_METMJ|SMALL ribosomal subunit protein uS19|Methanoculleus marisnigri (strain

Query: 1 LVADIQSGNK 10
L+AD++SG++
Sbjct: 57 LLADLRSGDE 66


>sp|TRUD_METVS|PROBABLE tRNA pseudouridine synthase D|Methanococcus vannielii (strain ATCC

Query: 1 LVADIQSGNK 10
++ DIQ NK
Sbjct: 121 IIKDIQKSNK 130




409|SequenceR|2050|2041|VYLKDLVADI

>sp|CSA2B_SACS2|CRISPR-ASSOCIATED aCascade subunit Cas7/Csa2 2|Saccharolobus solfataricus (strain

Query: 1 VYLKDLVADI 10
V LKD++AD+
Sbjct: 111 VMLKDVIADV 120


>sp|CAPPA_METS5|PHOSPHOENOLPYRUVATE carboxylase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VYLKDLVADI 10
VY++DLV +I
Sbjct: 163 VYVRDLVGEI 172


>sp|FTRL_ARCFU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Archaeoglobus fulgidus (strain ATCC

Query: 1 VYLKDLV 7
+YLKDL+
Sbjct: 291 IYLKDLI 297


>sp|CAPPA_SULTO|PHOSPHOENOLPYRUVATE carboxylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VYLKDLVADI 10
+Y+KDL+ +I
Sbjct: 164 IYVKDLIGEI 173


>sp|ILVD_METST|DIHYDROXY-ACID dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VYLKDLVADI 10
++LKDLV ++
Sbjct: 48 IHLKDLVQEV 57


>sp|RS3A_METHJ|SMALL ribosomal subunit protein eS1|Methanospirillum hungatei JF-1

Query: 1 VYLKDLVAD 9
VYL D VAD
Sbjct: 31 VYLGDTVAD 39


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 YLKDLVA 8
YL+DL+A
Sbjct: 336 YLRDLIA 342


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 2 YLKDLVA 8
YL+DL+A
Sbjct: 325 YLRDLIA 331


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 LKDLVADI 10
L+D+VADI
Sbjct: 332 LEDVVADI 339


>sp|Y1251_PYRAB|RUTC family protein PYRAB12510|Pyrococcus abyssi (strain GE5 /

Query: 1 VYLKDL 6
VYLKDL
Sbjct: 78 VYLKDL 83


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 2 YLKDLVA 8
YLKD++A
Sbjct: 288 YLKDIIA 294




410|SequenceR|2055|2046|EVSACVYLKD

>sp|Y2365_ARCFU|IRON-SULFUR cluster assembly SufBD family|Archaeoglobus fulgidus (strain ATCC

Query: 2 VSACVYLK 9
V AC+YLK
Sbjct: 108 VEACLYLK 115


>sp|RL30_METBU|LARGE ribosomal subunit protein uL30|Methanococcoides burtonii (strain

Query: 1 EVSACVYLKD 10
+V+ CV+L+D
Sbjct: 28 KVNHCVFLQD 37


>sp|DADD_METTH|5'-DEOXYADENOSINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 CVYLKD 10
CV+LKD
Sbjct: 248 CVWLKD 253




411|SequenceR|2060|2051|VTMLFEVSAC

***** No hits found ******


412|SequenceR|2065|2056|IFFDAVTMLF

>sp|THIM_METLZ|HYDROXYETHYLTHIAZOLE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 FFDAVTML 9
FFDAVT L
Sbjct: 242 FFDAVTSL 249


>sp|SYC_THEAC|CYSTEINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IFFDAVTMLF 10
IFFDAV L
Sbjct: 44 IFFDAVAKLL 53


>sp|UBAA_HALVD|SAMP-ACTIVATING enzyme E1|Haloferax volcanii (strain ATCC 29605

Query: 1 IFFDAVTMLF 10
+F+DA+ M F
Sbjct: 225 LFYDAMDMTF 234


>sp|SYC_THEVO|CYSTEINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IFFDAV 6
IFFDAV
Sbjct: 44 IFFDAV 49


>sp|CAS1B_METRM|CRISPR-ASSOCIATED protein Cas1 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 IFFDAVTML 9
I FDA+T+L
Sbjct: 47 ITFDALTLL 55


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 2 FFDAVT 7
FFDA+T
Sbjct: 237 FFDAIT 242


>sp|GSA_PYRCJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 FDAVTMLF 10
FD V MLF
Sbjct: 11 FDGVLMLF 18




413|SequenceR|2070|2061|QPVAKIFFDA

>sp|Y1986_AERPE|UNCHARACTERIZED protein APE_1986.1|Aeropyrum pernix (strain ATCC 700893

Query: 3 VAKIFFDA 10
+AKIF DA
Sbjct: 106 IAKIFLDA 113


>sp|DNLI1_METBF|DNA ligase 1|Methanosarcina barkeri (strain Fusaro /

Query: 2 PVAKIFFD 9
PVA FFD
Sbjct: 304 PVAVFFFD 311


>sp|DNLI1_METMA|DNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PVAKIFFD 9
PVA FFD
Sbjct: 336 PVAVFFFD 343


>sp|DNLI1_METAC|DNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PVAKIFFD 9
PVA FFD
Sbjct: 337 PVAVFFFD 344


>sp|Y1502_ARCFU|UNCHARACTERIZED protein AF_1502|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PVAKIFFD 9
P+AKIF +
Sbjct: 17 PIAKIFLN 24


>sp|DTDA_PYRIL|D-AMINOACYL-TRNA deacylase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PVAKIFFD 9
PV++IF D
Sbjct: 11 PVSRIFLD 18




414|SequenceR|2075|2066|VNEPSQPVAK

>sp|DGGGP_METBU|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VNEPSQPV 8
VN+PS+P+
Sbjct: 73 VNKPSRPI 80


>sp|DGGGP_NATPD|DIGERANYLGERANYLGLYCERYL phosphate synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VNEPSQPVAK 10
+NEP +P+ +
Sbjct: 67 INEPDRPIPR 76


>sp|SECD_THEGJ|PROTEIN-EXPORT membrane protein SecD|Thermococcus gammatolerans (strain DSM

Query: 1 VNEPSQPVAK 10
+ EP +PV+K
Sbjct: 48 IAEPEKPVSK 57


>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 1 VNEPSQPVAK 10
VNE S+P A+
Sbjct: 583 VNEESEPFAR 592


>sp|DGGGP_PYRAB|DIGERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 VNEPSQPVAK 10
VN P++P+ +
Sbjct: 67 VNRPNRPIPR 76


>sp|DGGGP_METJA|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VNEPSQPV 8
+N+PS+P+
Sbjct: 72 INKPSRPL 79


>sp|MPGP_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 3 EPSQPVAK 10
EP++PV K
Sbjct: 20 EPAEPVIK 27




415|SequenceR|2080|2071|QTEKAVNEPS

>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 1 QTEKAVNEPS 10
Q E A+NEP+
Sbjct: 648 QIEAALNEPA 657


>sp|MTAD_THEON|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus onnurineus (strain NA1)

Query: 1 QTEKAVNE 8
+TEK VNE
Sbjct: 151 KTEKEVNE 158




416|SequenceR|2085|2076|QRPLIQTEKA

>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 1 QRPLIQT 7
QRPL+QT
Sbjct: 699 QRPLVQT 705


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 1 QRPLIQT 7
QRPL+QT
Sbjct: 699 QRPLVQT 705


>sp|MUTL_METLZ|DNA mismatch repair protein MutL|Methanocorpusculum labreanum (strain

Query: 1 QRPLIQTEK 9
Q PL QTEK
Sbjct: 376 QAPLKQTEK 384


>sp|RL23_NANEQ|LARGE ribosomal subunit protein uL23|Nanoarchaeum equitans (strain

Query: 4 LIQTEKA 10
L+QTEKA
Sbjct: 3 LLQTEKA 9




417|SequenceR|2090|2081|KGTATQRPLI

>sp|ASSY_IGNH4|ARGININOSUCCINATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GTATQRPLI 10
GTA RPLI
Sbjct: 88 GTALARPLI 96


>sp|ASSY_ARCFU|ARGININOSUCCINATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GTATQRPLI 10
GTA RPLI
Sbjct: 86 GTALARPLI 94


>sp|ASSY_PYRAE|ARGININOSUCCINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GTATQRPLI 10
GTA RPLI
Sbjct: 90 GTALARPLI 98


>sp|ASSY_HYPBU|ARGININOSUCCINATE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 2 GTATQRPLI 10
GTA RPLI
Sbjct: 86 GTALARPLI 94


>sp|TREH_THEAC|TREHALASE acidophilum (strain ATCC 25905

Query: 4 ATQRPLI 10
AT+RPLI
Sbjct: 113 ATERPLI 119


>sp|ASSY_METAC|ARGININOSUCCINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GTATQRPLI 10
GT+ RPLI
Sbjct: 89 GTSVARPLI 97


>sp|ASSY_METMA|ARGININOSUCCINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GTATQRPLI 10
GT+ RPLI
Sbjct: 89 GTSVARPLI 97


>sp|ASSY_METBU|ARGININOSUCCINATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GTATQRPLI 10
GT+ RPLI
Sbjct: 89 GTSIARPLI 97


>sp|PDXT_META3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus aeolicus (strain

Query: 1 KGTATQRPLI 10
KGT ++PL+
Sbjct: 83 KGTGKEQPLL 92


>sp|ASSY_HALMA|ARGININOSUCCINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 GTATQRPLI 10
GTA RP+I
Sbjct: 91 GTALARPVI 99


>sp|PDXT_METM5|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 1 KGTATQRPLI 10
KGT ++PL+
Sbjct: 84 KGTGKEQPLL 93


>sp|PDXT_METM7|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 1 KGTATQRPLI 10
KGT ++PL+
Sbjct: 84 KGTGKEQPLL 93


>sp|ASSY_METBF|ARGININOSUCCINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GTATQRPLI 10
GT+ RPLI
Sbjct: 89 GTSIARPLI 97


>sp|ASSY_HALWD|ARGININOSUCCINATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GTATQRPLI 10
GTA RP+I
Sbjct: 87 GTALARPII 95


>sp|AATB_ARCFU|A-TYPE ATP synthase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KGTATQRPLI 10
KGT TQ P++
Sbjct: 293 KGTITQMPIL 302


>sp|PDXT_METMP|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 1 KGTATQRPLI 10
KGT ++PL+
Sbjct: 84 KGTGKEQPLL 93


>sp|HIS8_SULTO|HISTIDINOL-PHOSPHATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KGTATQRPLI 10
KG A ++P+I
Sbjct: 318 KGVAIRKPII 327


>sp|ASSY_NATPD|ARGININOSUCCINATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GTATQRPLI 10
GTA RP+I
Sbjct: 90 GTALARPVI 98


>sp|PDXT_METVS|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus vannielii

Query: 1 KGTATQRPLI 10
KGT ++PL+
Sbjct: 84 KGTGKEQPLL 93


>sp|ASSY_METBA|ARGININOSUCCINATE synthase|Methanosarcina barkeri

Query: 2 GTATQRPLI 10
GT+ RPLI
Sbjct: 89 GTSIARPLI 97


>sp|AATB_METTL|A-TYPE ATP synthase subunit B|Methanothermococcus thermolithotrophicus

Query: 1 KGTATQRPLI 10
KGT TQ P++
Sbjct: 232 KGTVTQIPIL 241


>sp|ASSY_HALSA|ARGININOSUCCINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GTATQRPLI 10
GTA RP+I
Sbjct: 89 GTALARPVI 97


>sp|PDXT_METM6|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 1 KGTATQRPLI 10
KGT ++PL+
Sbjct: 84 KGTGKKQPLL 93


>sp|Y231_METJA|UNCHARACTERIZED protein MJ0231|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KGTATQRPLI 10
+GTATQ+ ++
Sbjct: 272 EGTATQKTVL 281


>sp|RL29_THEGJ|LARGE ribosomal subunit protein uL29|Thermococcus gammatolerans (strain

Query: 2 GTATQRPLI 10
GT+T+ P++
Sbjct: 35 GTSTENPMV 43


>sp|AATB_STAMF|A-TYPE ATP synthase subunit B|Staphylothermus marinus (strain ATCC 43588

Query: 1 KGTATQRPLI 10
KG+ TQ P++
Sbjct: 301 KGSVTQMPIL 310


>sp|AATB_NITMS|A-TYPE ATP synthase subunit B|Nitrosopumilus maritimus (strain SCM1)

Query: 1 KGTATQRPLI 10
KG+ TQ P++
Sbjct: 299 KGSVTQVPIL 308


>sp|AATB_PYRCJ|A-TYPE ATP synthase subunit B|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 KGTATQRPLI 10
KG+ TQ P++
Sbjct: 298 KGSVTQFPIL 307


>sp|AATB_PYRNV|A-TYPE ATP synthase subunit B|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 KGTATQRPLI 10
KG+ TQ P++
Sbjct: 298 KGSVTQFPIL 307


>sp|AATB_PYRAR|A-TYPE ATP synthase subunit B|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 KGTATQRPLI 10
KG+ TQ P++
Sbjct: 298 KGSVTQFPIL 307


>sp|AATB_METS5|A-TYPE ATP synthase subunit B|Metallosphaera sedula (strain ATCC 51363

Query: 1 KGTATQRPLI 10
KG+ TQ P++
Sbjct: 300 KGSITQMPIL 309


>sp|AATB_SULTO|A-TYPE ATP synthase subunit B|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KGTATQRPLI 10
KG+ TQ P++
Sbjct: 299 KGSITQMPIL 308


>sp|AATB_SACI7|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 KGTATQRPLI 10
KG+ TQ P++
Sbjct: 297 KGSITQMPIL 306


>sp|AATB_SACI6|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KGTATQRPLI 10
KG+ TQ P++
Sbjct: 297 KGSITQMPIL 306


>sp|AATB_SACI4|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KGTATQRPLI 10
KG+ TQ P++
Sbjct: 297 KGSITQMPIL 306


>sp|AATB_SACI3|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.27)

Query: 1 KGTATQRPLI 10
KG+ TQ P++
Sbjct: 297 KGSITQMPIL 306


>sp|AATB_SACI2|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 KGTATQRPLI 10
KG+ TQ P++
Sbjct: 297 KGSITQMPIL 306


>sp|AATB_SACI1|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 KGTATQRPLI 10
KG+ TQ P++
Sbjct: 297 KGSITQMPIL 306


>sp|AATB_METKA|A-TYPE ATP synthase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 KGTATQRPLI 10
KG+ TQ P++
Sbjct: 819 KGSITQMPIL 828


>sp|PGK2_PYRHO|2-PHOSPHOGLYCERATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KGTATQRPLI 10
KGT T P++
Sbjct: 153 KGTVTDSPIV 162




418|SequenceR|2095|2086|KEIKVKGTAT

>sp|AROA_SACS2|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 3 IKVKGTAT 10
IK+KG+AT
Sbjct: 79 IKLKGSAT 86




419|SequenceR|2100|2091|RVSDDKEIKV

>sp|GCH3_SACI7|GTP cyclohydrolase III|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 RVSDDKEIKV 10
+ SDD +IKV
Sbjct: 186 KFSDDNKIKV 195


>sp|GCH3_SACI2|GTP cyclohydrolase III|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 RVSDDKEIKV 10
+ SDD +IKV
Sbjct: 186 KFSDDNKIKV 195


>sp|GCH3_SACI1|GTP cyclohydrolase III|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 RVSDDKEIKV 10
+ SDD +IKV
Sbjct: 186 KFSDDNKIKV 195




420|SequenceR|2105|2096|LTMNPRVSDD

>sp|FEN_IGNH4|FLAP endonuclease 1|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 MNPRVSDD 10
+NP+V+DD
Sbjct: 286 LNPQVTDD 293


>sp|HFO1_METFO|ARCHAEAL histone A1|Methanobacterium formicicum

Query: 5 PRVSDD 10
PRVSDD
Sbjct: 19 PRVSDD 24


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 1 LTMNPRVS 8
+ MNPRVS
Sbjct: 298 IEMNPRVS 305


>sp|CBID_THEAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 TMNPRV 7
TMNPRV
Sbjct: 156 TMNPRV 161


>sp|FEN_METBU|FLAP endonuclease 1|Methanococcoides burtonii (strain DSM 6242

Query: 3 MNPRVSDD 10
MNP V+DD
Sbjct: 281 MNPPVTDD 288


>sp|SYC_IGNH4|CYSTEINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 TMNPRVSD 9
T++PRV+D
Sbjct: 108 TVHPRVTD 115


>sp|FEN_THEGJ|FLAP endonuclease 1|Thermococcus gammatolerans (strain DSM 15229

Query: 3 MNPRVSDD 10
+NP V+DD
Sbjct: 280 LNPPVTDD 287


>sp|FEN_THEKO|FLAP endonuclease 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 MNPRVSDD 10
+NP V+DD
Sbjct: 280 LNPPVTDD 287


>sp|FEN_ARCFU|FLAP endonuclease 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 MNPRVSDD 10
+NP V+DD
Sbjct: 280 LNPPVTDD 287


>sp|FEN_THEON|FLAP endonuclease 1|Thermococcus onnurineus (strain NA1)

Query: 3 MNPRVSDD 10
+NP V+DD
Sbjct: 280 LNPPVTDD 287


>sp|AROA_PYRAB|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 MNPRVSDD 10
MNP +S+D
Sbjct: 47 MNPLISED 54


>sp|DADD_METBU|5'-DEOXYADENOSINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LTMNPRVSD 9
LTM+P V D
Sbjct: 12 LTMDPEVDD 20


>sp|FEN_AERPE|FLAP endonuclease 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 MNPRVSDD 10
+NP V+DD
Sbjct: 288 LNPPVTDD 295


>sp|FEN_METMJ|FLAP endonuclease 1|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 MNPRVSDD 10
+NP V+DD
Sbjct: 278 LNPPVTDD 285


>sp|FEN_HALSA|FLAP endonuclease 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 LTMNPRVSDD 10
L +NP V+DD
Sbjct: 269 LFLNPDVTDD 278


>sp|FEN_HALS3|FLAP endonuclease 1|Halobacterium salinarum (strain ATCC 29341

Query: 1 LTMNPRVSDD 10
L +NP V+DD
Sbjct: 269 LFLNPDVTDD 278




421|SequenceR|2110|2101|TIMAKLTMNP

>sp|MVHA_METTM|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter marburgensis (strain

Query: 3 MAKLTMNP 10
M KLTM P
Sbjct: 1 MVKLTMEP 8


>sp|MVHA_METTH|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter thermautotrophicus

Query: 3 MAKLTMNP 10
M KLTM P
Sbjct: 1 MVKLTMEP 8


>sp|PYRC_PYRHO|DIHYDROOROTASE horikoshii (strain ATCC 700860

Query: 2 IMAKLTMNP 10
I+AK+++NP
Sbjct: 315 IVAKMSINP 323


>sp|URE1_SULTO|UREASE subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 MAKLTMNP 10
+AK+T+NP
Sbjct: 399 LAKITINP 406


>sp|CBID_SULAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 MAKLTMNP 10
+AK TMNP
Sbjct: 155 LAKNTMNP 162




422|SequenceR|2115|2106|VVEPDTIMAK

>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VVEPDTIMAK 10
VVEPD I+AK
Sbjct: 535 VVEPDEIIAK 544


>sp|CDC6N_HALMA|ORC1-TYPE DNA replication protein 14|Haloarcula marismortui (strain ATCC

Query: 1 VVEPDTIMAK 10
+VEPDTI+ +
Sbjct: 16 LVEPDTIIDR 25


>sp|RL30_METKA|LARGE ribosomal subunit protein uL30|Methanopyrus kandleri (strain AV19

Query: 2 VEPDTIMA 9
VEPDT+ A
Sbjct: 51 VEPDTVAA 58


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 VVEPDTIMAK 10
V+EP+T++ K
Sbjct: 525 VIEPETLLEK 534


>sp|CDC65_HALSA|ORC1-TYPE DNA replication protein 5|Halobacterium salinarum (strain ATCC

Query: 1 VVEPDTIM 8
+VEPDTI+
Sbjct: 16 LVEPDTII 23


>sp|ENDA_METKA|TRNA-SPLICING endonuclease|Methanopyrus kandleri (strain AV19 /

Query: 1 VVEPDT 6
VVEPDT
Sbjct: 130 VVEPDT 135


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 VVEPDTIMAK 10
++EP TI+ K
Sbjct: 518 IIEPSTIIEK 527


>sp|PCNA_PYRFU|DNA polymerase sliding clamp|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VVEPDTI 7
VVEP+TI
Sbjct: 63 VVEPETI 69


>sp|FBPAP_METS5|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VVEPDTIMA 9
VV PDT+ A
Sbjct: 20 VVHPDTMAA 28


>sp|DAPA_METVS|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 VEPDTI 7
+EPDTI
Sbjct: 141 IEPDTI 146


>sp|SYR_HALSA|ARGININE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 EPDTIMA 9
+PDTI+A
Sbjct: 121 DPDTILA 127




423|SequenceR|2120|2111|LSAVFVVEPD

>sp|AROE_METTP|SHIKIMATE dehydrogenase (NADP(+))|Methanothrix thermoacetophila (strain DSM

Query: 2 SAVFVVEPD 10
SA+ VVEPD
Sbjct: 67 SAISVVEPD 75


>sp|TDXH1_THEAC|PEROXIREDOXIN 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 AVFVVEPD 10
AVF+V+P+
Sbjct: 127 AVFIVDPN 134


>sp|TDXH_STAMF|PEROXIREDOXIN marinus (strain ATCC 43588

Query: 1 LSAVFVVEPD 10
+ AVFV++P+
Sbjct: 123 VRAVFVIDPN 132


>sp|TDXH_NANEQ|PEROXIREDOXIN equitans (strain Kin4-M)

Query: 1 LSAVFVVEPD 10
+ AVF+V+P+
Sbjct: 119 VRAVFIVDPE 128


>sp|TDXH_METTM|PEROXIREDOXIN marburgensis (strain ATCC BAA-927

Query: 1 LSAVFVVEPD 10
+ AVFVV+P+
Sbjct: 118 VRAVFVVDPE 127


>sp|TDXH_METTH|PEROXIREDOXIN thermautotrophicus (strain ATCC 29096

Query: 1 LSAVFVVEPD 10
+ AVFVV+P+
Sbjct: 118 VRAVFVVDPE 127


>sp|TDXH_IGNH4|PEROXIREDOXIN hospitalis (strain KIN4/I /

Query: 1 LSAVFVVEPD 10
+ AVF+V+P+
Sbjct: 123 VRAVFIVDPE 132


>sp|TDXH_ARCFU|PEROXIREDOXIN fulgidus (strain ATCC 49558

Query: 3 AVFVVEPD 10
AVF+V+P+
Sbjct: 122 AVFIVDPE 129


>sp|TDXH_METMA|PEROXIREDOXIN mazei (strain ATCC BAA-159

Query: 3 AVFVVEPD 10
AVF+++P+
Sbjct: 128 AVFIIDPE 135


>sp|APGM_IGNH4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 AVFVVEPD 10
AVF V PD
Sbjct: 344 AVFAVTPD 351




424|SequenceR|2125|2116|ADAKTLSAVF

>sp|GVPF1_HALSA|GAS vesicle protein F1|Halobacterium salinarum (strain ATCC 700922

Query: 2 DAKTLSAV 9
D KTLSAV
Sbjct: 33 DYKTLSAV 40




425|SequenceR|2130|2121|ATLAPADAKT

>sp|IF2P_METMJ|PROBABLE translation initiation factor IF-2|Methanoculleus marisnigri

Query: 1 ATLAPADAKT 10
ATL P DA T
Sbjct: 48 ATLVPIDAVT 57




426|SequenceR|2135|2126|NCQFSATLAP

***** No hits found ******


427|SequenceR|2140|2131|TSLSLNCQFS

>sp|GATB_SACS2|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Saccharolobus solfataricus (strain

Query: 1 TSLSLNCQFS 10
T+L+LNCQ +
Sbjct: 61 TALALNCQIA 70


>sp|PYRB_METST|ASPARTATE carbamoyltransferase catalytic subunit|Methanosphaera stadtmanae

Query: 5 LNCQFS 10
LNC+FS
Sbjct: 205 LNCKFS 210




428|SequenceR|2145|2136|QELKSTSLSL

>sp|PSTB_METAC|PHOSPHATE import ATP-binding protein PstB|Methanosarcina acetivorans (strain

Query: 3 LKSTSLSL 10
LKST+LSL
Sbjct: 148 LKSTALSL 155




429|SequenceR|2150|2141|SAEMMQELKS

>sp|ACD_METJA|ACETATE--COA ligase [ADP-forming]|Methanocaldococcus jannaschii (strain ATCC

Query: 3 EMMQELKS 10
EM++ELKS
Sbjct: 636 EMLRELKS 643


>sp|GLPK_THEGJ|GLYCEROL kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 SAEMMQELK 9
+AEM++E+K
Sbjct: 106 TAEMVEEIK 114




430|SequenceR|2155|2146|KLDRVSAEMM

>sp|PYRH_THESM|URIDYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 KLDRVSAEMM 10
KLDR+S E +
Sbjct: 158 KLDRISTEKL 167




431|SequenceR|2160|2151|PCALVKLDRV

>sp|RIFK_CENSY|RIBOFLAVIN kinase|Cenarchaeum symbiosum (strain A)

Query: 1 PCALVKLDR 9
PC L++L+R
Sbjct: 147 PCHLIRLER 155


>sp|RL2_SULTO|LARGE ribosomal subunit protein uL2|Sulfurisphaera tokodaii (strain DSM

Query: 1 PCALVKLD 8
P AL+KLD
Sbjct: 53 PLALIKLD 60


>sp|IPYR_THELN|INORGANIC pyrophosphatase|Thermococcus litoralis (strain ATCC 51850

Query: 3 ALVKLDRV 10
L+KLDRV
Sbjct: 38 GLIKLDRV 45


>sp|Y2414_ARCFU|UNCHARACTERIZED HTH-type transcriptional regulator AF_2414|Archaeoglobus fulgidus

Query: 2 CALVKLD 8
CAL++LD
Sbjct: 69 CALIELD 75


>sp|Y366_METJA|UNCHARACTERIZED protein MJ0366|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CALVKLD 8
C LVKLD
Sbjct: 81 CELVKLD 87


>sp|THIL_METJA|THIAMINE-MONOPHOSPHATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CALVKLD 8
CA++K+D
Sbjct: 29 CAIIKID 35




432|SequenceR|2165|2156|KERLFPCALV

>sp|MDH_THEVO|MALATE dehydrogenase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KERLFPCA 8
K+R+ PCA
Sbjct: 250 KKRVIPCA 257


>sp|MDH_THEAC|MALATE dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KERLFPCA 8
K+R+ PCA
Sbjct: 250 KKRVIPCA 257


>sp|Y1555_ARCFU|UNCHARACTERIZED protein AF_1555|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KERLFPCALV 10
+E +FPCAL+
Sbjct: 17 REVVFPCALL 26


>sp|Y1196_METJA|PUTATIVE amino-acid transporter MJ1196|Methanocaldococcus jannaschii (strain

Query: 1 KERLFPCALV 10
K+R+FP A +
Sbjct: 276 KDRIFPKAFI 285


>sp|CUTA_PYRHO|DIVALENT-CATION tolerance protein CutA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KERLFPCA 8
KERL CA
Sbjct: 23 KERLIACA 30


>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 ERLFPCALV 10
ER+F C+ V
Sbjct: 404 ERIFDCSTV 412




433|SequenceR|2170|2161|INKGRKERLF

>sp|PSTB2_HALMA|PHOSPHATE import ATP-binding protein PstB|Haloarcula marismortui (strain ATCC

Query: 1 INKGRKERLF 10
INKG RLF
Sbjct: 164 INKGLLARLF 173


>sp|COFG_ARCFU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 INKGRKERLF 10
I +GR++RL+
Sbjct: 166 IGEGREDRLY 175


>sp|Y455_METJA|UNCHARACTERIZED protein MJ0455|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 INKGRKERL 9
INKG KE +
Sbjct: 115 INKGEKEAM 123


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 INKGRKER 8
INKG KE+
Sbjct: 27 INKGEKEQ 34




434|SequenceR|2175|2166|QLVTTINKGR

>sp|KAE1_THEPD|TRNA N6-adenosine threonylcarbamoyltransferase|Thermofilum pendens

Query: 2 LVTTINKGR 10
+VTT N+GR
Sbjct: 143 MVTTFNEGR 151


>sp|DTDA_HALSA|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 700922

Query: 3 VTTINKGR 10
VTT+N GR
Sbjct: 332 VTTVNAGR 339


>sp|DTDA_HALS3|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 29341

Query: 3 VTTINKGR 10
VTT+N GR
Sbjct: 332 VTTVNAGR 339


>sp|DPOL1_SULOH|DNA polymerase 1|Sulfurisphaera ohwakuensis

Query: 1 QLVTTIN 7
QLVTTIN
Sbjct: 734 QLVTTIN 740


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 QLVTTINKGR 10
+ + T+NKGR
Sbjct: 408 KYIQTVNKGR 417




435|SequenceR|2180|2171|FLSCPQLVTT

>sp|HYPA_PYRFU|HYDROGENASE maturation factor HypA|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FLSCPQ 6
FLSCP+
Sbjct: 107 FLSCPK 112


>sp|HYPA_PYRHO|HYDROGENASE maturation factor HypA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FLSCPQ 6
FLSCP+
Sbjct: 107 FLSCPR 112


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter thermautotrophicus

Query: 2 LSCPQLVT 9
L+CP +VT
Sbjct: 578 LACPAMVT 585


>sp|MTSA_METMA|METHYLATED-THIOL--COENZYME M methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LSCPQLV 8
+SCPQ++
Sbjct: 229 ISCPQIL 235




436|SequenceR|2185|2176|TCKEMFLSCP

>sp|ECFA_METST|ENERGY-COUPLING factor transporter ATP-binding protein|Methanosphaera stadtmanae

Query: 1 TCKEMF 6
TCKE+F
Sbjct: 223 TCKEIF 228


>sp|MCRD_METJA|METHYL-COENZYME M reductase I operon|Methanocaldococcus jannaschii (strain ATCC

Query: 2 CKEMF 6
CKEMF
Sbjct: 97 CKEMF 101


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 CKEMFLSCP 10
C E L+CP
Sbjct: 419 CGECMLACP 427


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 CKEMFLSCP 10
C E L+CP
Sbjct: 419 CGECMLACP 427


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 CKEMFLSCP 10
C E L+CP
Sbjct: 417 CGECALACP 425




437|SequenceR|2190|2181|KGSAWTCKEM

>sp|RPO3_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum aerophilum (strain ATCC

Query: 4 AWTCKEM 10
AWTCK++
Sbjct: 196 AWTCKDL 202


>sp|RPO3_PYRAR|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum arsenaticum (strain DSM

Query: 4 AWTCKEM 10
AWTCK++
Sbjct: 196 AWTCKDL 202


>sp|RPO3_PYRIL|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum islandicum (strain DSM 4184

Query: 4 AWTCKEM 10
AWTC+++
Sbjct: 196 AWTCRDI 202


>sp|RIBL_METMP|FAD synthase|Methanococcus maripaludis (strain DSM 14266

Query: 5 WTCKEM 10
W CKE+
Sbjct: 143 WCCKEL 148


>sp|RIBL_METM7|FAD synthase|Methanococcus maripaludis (strain C7 /

Query: 5 WTCKEM 10
W CKE+
Sbjct: 143 WCCKEL 148


>sp|RIBL_METM6|FAD synthase|Methanococcus maripaludis (strain C6 /

Query: 5 WTCKEM 10
W CKE+
Sbjct: 143 WCCKEL 148


>sp|RIBL_METM5|FAD synthase|Methanococcus maripaludis (strain C5 /

Query: 5 WTCKEM 10
W CKE+
Sbjct: 143 WCCKEL 148


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 KGSAWTCKEM 10
+G WT KE+
Sbjct: 530 EGREWTVKEI 539


>sp|SYE_HALMA|GLUTAMATE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 KGSAWTC 7
KG A+TC
Sbjct: 198 KGGAYTC 204


>sp|RPO3_PYRCJ|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum calidifontis (strain DSM

Query: 4 AWTCKEM 10
A TCKEM
Sbjct: 196 ATTCKEM 202


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GSAWTCK 8
GS W CK
Sbjct: 339 GSCWRCK 345


>sp|COBS_METKA|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanopyrus kandleri (strain AV19 /

Query: 4 AWTCKE 9
AWTC E
Sbjct: 202 AWTCLE 207


>sp|FSX1_NATA2|FUSEXIN 1|Natrinema altunense (strain JCM 12890

Query: 1 KGSAWTC 7
+ S+WTC
Sbjct: 522 RDSSWTC 528


>sp|Y1319_METJA|UNCHARACTERIZED sodium-dependent transporter MJ1319|Methanocaldococcus jannaschii

Query: 1 KGSAWT 6
KGS WT
Sbjct: 83 KGSEWT 88


>sp|SYE_METMJ|GLUTAMATE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KGSAWTCKEM 10
KG A C+E+
Sbjct: 208 KGKACPCREL 217


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GSAWTCK 8
G+ W CK
Sbjct: 341 GTCWRCK 347




438|SequenceR|2195|2186|ININQKGSAW

>sp|Y1029_THESM|UPF0282 protein TSIB_1029|Thermococcus sibiricus (strain DSM 12597

Query: 1 ININQKGSAW 10
IN +QK AW
Sbjct: 113 INFSQKKRAW 122


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NQKGSAW 10
NQKGS W
Sbjct: 1833 NQKGSVW 1839


>sp|TRPF_METKA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanopyrus kandleri (strain AV19 /

Query: 3 INQKGSAW 10
++Q+GS W
Sbjct: 105 VDQRGSVW 112


>sp|PRIS_METJA|DNA primase small subunit PriS|Methanocaldococcus jannaschii (strain

Query: 1 ININQKGSAW 10
+N+N GS W
Sbjct: 189 LNLNSVGSGW 198


>sp|RL21_METMJ|LARGE ribosomal subunit protein eL21|Methanoculleus marisnigri (strain

Query: 3 INQKGSAW 10
I Q+G AW
Sbjct: 65 IGQRGRAW 72


>sp|FLAG_METJA|PUTATIVE flagella-related protein G|Methanocaldococcus jannaschii (strain

Query: 1 ININQKGSAW 10
+NIN+KG A
Sbjct: 38 LNINKKGDAL 47


>sp|RL21_METPE|LARGE ribosomal subunit protein eL21|Methanosphaerula palustris (strain

Query: 3 INQKGSAW 10
I Q+G AW
Sbjct: 65 IGQRGRAW 72


>sp|G1PDH_METB6|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanoregula boonei (strain DSM 21154

Query: 1 ININQKGSAW 10
I NQ+ SAW
Sbjct: 225 IRPNQEQSAW 234


>sp|RL21_METHJ|LARGE ribosomal subunit protein eL21|Methanospirillum hungatei JF-1

Query: 3 INQKGSAW 10
+ Q+G AW
Sbjct: 65 VGQRGRAW 72


>sp|Y1052_THEAC|UNCHARACTERIZED solute-binding protein Ta1052|Thermoplasma acidophilum (strain ATCC

Query: 3 INQKGSAW 10
IN+ G AW
Sbjct: 313 INESGPAW 320


>sp|Y1321_PYRHO|UPF0252 protein PH1321|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ININQKGSAW 10
IN+ +G++W
Sbjct: 166 INVTLRGNSW 175


>sp|Y544_THEVO|UNCHARACTERIZED solute-binding protein TV0544|Thermoplasma volcanium (strain ATCC

Query: 3 INQKGSAW 10
IN+ G AW
Sbjct: 300 INESGPAW 307




439|SequenceR|2200|2191|FEKVMININQ

>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 FEKVMIN 7
FE VMIN
Sbjct: 556 FENVMIN 562


>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 EKVMININQ 10
EK+M NI+Q
Sbjct: 12 EKIMRNIDQ 20


>sp|HIS1_METMA|ATP phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FEKVMININ 9
FEK+ +N+N
Sbjct: 127 FEKLGVNVN 135


>sp|PRIS_METM7|DNA primase small subunit PriS|Methanococcus maripaludis (strain C7 /

Query: 1 FEKVMININ 9
F K+M N+N
Sbjct: 314 FHKIMYNVN 322


>sp|PRIS_METM5|DNA primase small subunit PriS|Methanococcus maripaludis (strain C5 /

Query: 1 FEKVMININ 9
F K+M N+N
Sbjct: 308 FHKIMYNVN 316


>sp|Y1268_SULTO|PUTATIVE HTH-type transcriptional regulatory protein|Sulfurisphaera tokodaii

Query: 2 EKVMININQ 10
+K+M+N+N+
Sbjct: 200 DKIMLNLNE 208




440|SequenceR|2205|2196|SIKIIFEKVM

>sp|NUCS_PYRAE|ENDONUCLEASE NucS|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SIKIIFEKV 9
++++IF+KV
Sbjct: 104 TVRVIFDKV 112




441|SequenceR|2210|2201|NLIIPSIKII

>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 3 IIPSIKII 10
I+PSIK+I
Sbjct: 52 ILPSIKVI 59


>sp|ADEC_METS3|ADENINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LIIPSIKI 9
L+IP+IKI
Sbjct: 545 LVIPAIKI 552


>sp|TOP6B_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 IIPSIKII 10
I+PSIKII
Sbjct: 51 ILPSIKII 58




442|SequenceR|2215|2206|ITLVTNLIIP

>sp|Y808_METJA|UNCHARACTERIZED protein MJ0808|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VTNLIIP 10
VTNLI+P
Sbjct: 211 VTNLIVP 217




443|SequenceR|2220|2211|SLAAMITLVT

***** No hits found ******


444|SequenceR|2225|2216|EKTKPSLAAM

>sp|MFND_METFA|TYRAMINE--L-GLUTAMATE ligase|Methanocaldococcus fervens (strain DSM 4213

Query: 2 KTKPSLAAM 10
KT+PSLA +
Sbjct: 260 KTEPSLAEL 268


>sp|RL15E_METAC|LARGE ribosomal subunit protein eL15|Methanosarcina acetivorans (strain

Query: 1 EKTKPSLAA 9
EKT+PS+ A
Sbjct: 182 EKTRPSIRA 190


>sp|RL15E_METMA|LARGE ribosomal subunit protein eL15|Methanosarcina mazei (strain ATCC

Query: 1 EKTKPSLAA 9
EKT+PS+ A
Sbjct: 182 EKTRPSIRA 190


>sp|RL15E_HALMA|LARGE ribosomal subunit protein eL15|Haloarcula marismortui (strain ATCC

Query: 1 EKTKPSL 7
EKT+PSL
Sbjct: 182 EKTRPSL 188


>sp|MFND_METJA|TYRAMINE--L-GLUTAMATE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KTKPSLAAM 10
KT PSLA +
Sbjct: 277 KTNPSLAEL 285




445|SequenceR|2230|2221|DKSGDEKTKP

>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DKSGDEKTKP 10
D GD+KTKP
Sbjct: 180 DSQGDQKTKP 189


>sp|HMEA_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 2 KSGDEKTKP 10
K+GDEK KP
Sbjct: 62 KTGDEKIKP 70


>sp|PYRG_METPE|CTP synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 DKSGDEKTKP 10
D GD KTKP
Sbjct: 184 DTMGDMKTKP 193


>sp|PYRG_METLZ|CTP synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 DKSGDEKTKP 10
D GD KTKP
Sbjct: 186 DTMGDLKTKP 195


>sp|PYRG_METHJ|CTP synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DKSGDEKTKP 10
D GD KTKP
Sbjct: 185 DSMGDLKTKP 194


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 1 DKSGDEKTKP 10
+K+GD K KP
Sbjct: 570 EKAGDRKMKP 579


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 DKSGDEKTKP 10
+K+GD K KP
Sbjct: 571 EKAGDRKMKP 580


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 DKSGDEKTKP 10
+K+GD K KP
Sbjct: 576 EKAGDRKMKP 585


>sp|PYRG_METB6|CTP synthase|Methanoregula boonei (strain DSM 21154

Query: 1 DKSGDEKTKP 10
D GD KTKP
Sbjct: 185 DAMGDLKTKP 194


>sp|PYRG_HALWD|CTP synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 KSGDEKTKP 10
K+G++KTKP
Sbjct: 193 KNGEQKTKP 201


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DKSGDEKTKP 10
D GD KTKP
Sbjct: 185 DTMGDFKTKP 194


>sp|PYRG_NATPD|CTP synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 KSGDEKTKP 10
K+G++KTKP
Sbjct: 192 KNGEQKTKP 200


>sp|PYRG_HALSA|CTP synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 KSGDEKTKP 10
K+G++KTKP
Sbjct: 191 KNGEQKTKP 199


>sp|PYRG_HALS3|CTP synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 KSGDEKTKP 10
K+G++KTKP
Sbjct: 191 KNGEQKTKP 199


>sp|PYRG_HALMA|CTP synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 KSGDEKTKP 10
K+G++KTKP
Sbjct: 193 KNGEQKTKP 201


>sp|PYRG_HALHT|CTP synthase|Haloarcula hispanica (strain ATCC 33960

Query: 2 KSGDEKTKP 10
K+G++KTKP
Sbjct: 193 KNGEQKTKP 201


>sp|Y2307_ARCFU|UNCHARACTERIZED protein AF_2307|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KSGDEKTKP 10
+SG EK KP
Sbjct: 290 RSGTEKLKP 298


>sp|GSA_METHJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DKSGDE 6
DKSGDE
Sbjct: 190 DKSGDE 195


>sp|GGR_METTP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DKSGDE 6
DKSGDE
Sbjct: 85 DKSGDE 90




446|SequenceR|2235|2226|MEKSTDKSGD

>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 MEKSTDKSGD 10
M+ TDK GD
Sbjct: 214 MDLKTDKKGD 223


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MEKSTDKSGD 10
M+ TDK GD
Sbjct: 214 MDLKTDKKGD 223




447|SequenceR|2240|2231|GWLNEMEKST

>sp|CBIA_SACS2|COBYRINATE a,c-diamide synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LNEMEKST 10
LNE+EKST
Sbjct: 293 LNELEKST 300


>sp|NIKR2_METTH|PUTATIVE nickel-responsive regulator 2|Methanothermobacter

Query: 2 WLNEME 7
W+NEME
Sbjct: 45 WMNEME 50


>sp|CBIA_SULTO|COBYRINATE a,c-diamide synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 LNEMEKST 10
LNE+EKS+
Sbjct: 297 LNELEKSS 304


>sp|IF2P_METVS|PROBABLE translation initiation factor IF-2|Methanococcus vannielii (strain

Query: 1 GWLNEMEK 8
WL EME+
Sbjct: 447 AWLKEMEE 454


>sp|RNZ_PYRFU|RIBONUCLEASE Z|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WLNEMEK 8
W+ E+EK
Sbjct: 171 WMKELEK 177


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 WLNEMEKST 10
W+NE+++ T
Sbjct: 583 WVNEIDEDT 591


>sp|HTR1_HALSA|SENSORY rhodopsin I transducer|Halobacterium salinarum (strain ATCC 700922

Query: 1 GWLNEMEKS 9
G LNEME++
Sbjct: 104 GRLNEMERT 112


>sp|HTR1_HALS3|SENSORY rhodopsin I transducer|Halobacterium salinarum (strain ATCC 29341

Query: 1 GWLNEMEKS 9
G LNEME++
Sbjct: 104 GRLNEMERT 112




448|SequenceR|2245|2236|NISKIGWLNE

>sp|MALG_THELN|TREHALOSE/MALTOSE transport system permease protein|Thermococcus litoralis (strain

Query: 2 ISKIGWLN 9
I K+GW+N
Sbjct: 129 IEKLGWVN 136


>sp|Y433_ARCFU|PROBABLE S-adenosyl-L-methionine-binding protein AF_0433|Archaeoglobus

Query: 3 SKIGWLNE 10
+KIGW E
Sbjct: 137 AKIGWFEE 144


>sp|DPHB_PYRIL|DIPHTHINE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 ISKIGW 7
+SK+GW
Sbjct: 202 VSKLGW 207


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 IGWLNE 10
+GW+NE
Sbjct: 218 LGWVNE 223


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 IGWLNE 10
+GW+NE
Sbjct: 218 LGWINE 223


>sp|DP2S_ARCFU|DNA polymerase II small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 NISKIGWLNE 10
N+S +G +NE
Sbjct: 145 NVSVVGMVNE 154


>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 ISKIGWL 8
+SK GW+
Sbjct: 429 VSKAGWM 435




449|SequenceR|2250|2241|WTNYDNISKI

>sp|PURA_META3|ADENYLOSUCCINATE synthetase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 TNYDNISK 9
TNYD+I++
Sbjct: 296 TNYDDITE 303


>sp|HLY_NATA1|HALOLYSIN asiatica (strain ATCC 700177

Query: 1 WTNYDNIS 8
W NYD S
Sbjct: 341 WDNYDTFS 348


>sp|GGGPS_HALMA|GERANYLGERANYLGLYCERYL phosphate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 WTNYDNISKI 10
W ++D+I KI
Sbjct: 4 WADWDHIVKI 13


>sp|SYK_THEKO|LYSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WTNYDNISKI 10
W +YD K+
Sbjct: 65 WDDYDRFRKV 74


>sp|NEP_NATMA|HALOLYSIN-LIKE extracellular serine protease Nep|Natrialba magadii

Query: 1 WTNYDNIS 8
W +YD++S
Sbjct: 341 WDDYDSLS 348


>sp|Y1155_METJA|UPF0313 protein MJ1155|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WTNYDNISKI 10
W N D+I ++
Sbjct: 58 WKNLDDIKRL 67


>sp|PROB_METAC|GLUTAMATE 5-kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 WTNYDNISK 9
+ NYDN+ K
Sbjct: 366 YNNYDNVIK 374


>sp|GGGPS_NATPD|GERANYLGERANYLGLYCERYL phosphate synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 WTNYDNISKI 10
W +D+I KI
Sbjct: 5 WAEWDHIVKI 14


>sp|SYK_PYRFU|LYSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WTNYDNISKI 10
W +YD K+
Sbjct: 65 WDDYDRFRKV 74


>sp|SYK_PYRHO|LYSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WTNYDNISKI 10
W +YD K+
Sbjct: 65 WDDYDRFRKV 74


>sp|SYK_PYRAB|LYSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 WTNYDNISKI 10
W +YD K+
Sbjct: 65 WDDYDRFRKV 74




450|SequenceR|2255|2246|DVGLFWTNYD

>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 4 LFWTNY 9
L WTNY
Sbjct: 355 LLWTNY 360


>sp|MSRA_METM5|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 2 VGLFWTNYD 10
+ LFW N+D
Sbjct: 73 LNLFWNNHD 81


>sp|MSRA_METM6|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 4 LFWTNYD 10
LFW N+D
Sbjct: 75 LFWNNHD 81


>sp|COBS_METBU|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanococcoides burtonii (strain DSM 6242

Query: 3 GLFWT 7
GLFWT
Sbjct: 265 GLFWT 269


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 GLFWTNYD 10
G FW +Y+
Sbjct: 17 GFFWPSYE 24


>sp|AGLB1_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DVGLFWTNYD 10
D G+++T YD
Sbjct: 27 DSGIYYTGYD 36


>sp|RPO2C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 2 VGLFWTNYD 10
+GL+ +NYD
Sbjct: 161 LGLYASNYD 169


>sp|Y605_METB6|UPF0316 protein Mboo_0605|Methanoregula boonei (strain DSM 21154

Query: 1 DVGLFWT 7
D+G FW+
Sbjct: 2 DIGTFWS 8


>sp|MSRA_METM7|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 4 LFWTNYD 10
LFW N+D
Sbjct: 75 LFWKNHD 81


>sp|Y1153_METTH|UNCHARACTERIZED protein MTH_1153|Methanothermobacter thermautotrophicus (strain

Query: 2 VGLFWTNYD 10
VG WTN D
Sbjct: 263 VGSKWTNVD 271


>sp|FILR1_METH6|METHANOGENESIS regulatory protein FilR1|Methanothrix harundinacea (strain 6Ac)

Query: 5 FWTNYD 10
FW N+D
Sbjct: 96 FWLNHD 101


>sp|LYSJ_PYRHO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 VGLFWTNYD 10
VGL TN+D
Sbjct: 238 VGLTLTNFD 246


>sp|RFCL_SULTO|REPLICATION factor C large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GLFWTNY 9
G+FW Y
Sbjct: 239 GVFWAKY 245


>sp|Y347_METJA|UNCHARACTERIZED protein MJ0347|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DVGLFW 6
DVG FW
Sbjct: 141 DVGFFW 146


>sp|Y1068_METJA|UNCHARACTERIZED membrane protein MJ1068|Methanocaldococcus jannaschii (strain

Query: 1 DVGLFWTNYD 10
DVGLF+ D
Sbjct: 40 DVGLFYAVLD 49




451|SequenceR|2260|2251|IETATDVGLF

>sp|Y632_METM7|MEMO1 family protein MmarC7_0632|Methanococcus maripaludis (strain C7 /

Query: 2 ETATDVGLF 10
ET+ DVG F
Sbjct: 169 ETSMDVGYF 177


>sp|Y191_METM5|MEMO1 family protein MmarC5_0191|Methanococcus maripaludis (strain C5 /

Query: 2 ETATDVGLF 10
ET+ DVG F
Sbjct: 169 ETSMDVGYF 177


>sp|Y1286_METM6|MEMO1 family protein MmarC6_1286|Methanococcus maripaludis (strain C6 /

Query: 2 ETATDVGLF 10
ET+ DVG F
Sbjct: 169 ETSIDVGYF 177


>sp|AOCD_ARCFU|ORNITHINE cyclodeaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IETATDVGLF 10
I TDVGLF
Sbjct: 383 IGVVTDVGLF 392


>sp|Y403_METJA|MEMO1 family protein MJ0403|Methanocaldococcus jannaschii (strain ATCC

Query: 2 ETATDVGLF 10
ETA +VG F
Sbjct: 172 ETAVEVGYF 180


>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 1 IETATDVGL 9
I ATDVGL
Sbjct: 598 ISGATDVGL 606


>sp|COFG_METMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ETATDVGLF 10
ETA D+G+
Sbjct: 91 ETAIDIGIL 99


>sp|MTAP_PYRAB|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 1 IETATDVGL 9
IETA ++GL
Sbjct: 138 IETAKELGL 146


>sp|Y688_THEON|UPF0284 protein TON_0688|Thermococcus onnurineus (strain NA1)

Query: 1 IETATDVGL 9
I+TA D+G+
Sbjct: 262 IDTAKDIGI 270




452|SequenceR|2265|2256|KFSETIETAT

***** No hits found ******


453|SequenceR|2270|2261|SHEIGKFSET

>sp|SYE_METBF|GLUTAMATE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 HEIGKFSET 10
HE GKFS +
Sbjct: 339 HEFGKFSTS 347


>sp|SYE_METBU|GLUTAMATE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 HEIGKFSET 10
HE GKFS +
Sbjct: 339 HEFGKFSTS 347


>sp|APGM_AERPE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Aeropyrum pernix (strain ATCC 700893

Query: 4 IGKFSET 10
IGKFSET
Sbjct: 392 IGKFSET 398


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HEIGKFSET 10
HE GKFS +
Sbjct: 339 HEFGKFSTS 347


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 HEIGKFSET 10
HE GKFS +
Sbjct: 339 HEFGKFSTS 347


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 3 EIGKFSET 10
E+G+F+ET
Sbjct: 1176 EVGRFTET 1183


>sp|APGM_PYRNV|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 SHEIGKFSE 9
+ ++GKFSE
Sbjct: 371 TDDVGKFSE 379


>sp|PYRK_PYRAB|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Pyrococcus abyssi (strain

Query: 3 EIGKFS 8
EIGKFS
Sbjct: 231 EIGKFS 236


>sp|Y449_METJA|UNCHARACTERIZED transporter MJ0449|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SHEIGKFS 8
++EIGKF+
Sbjct: 89 AYEIGKFA 96


>sp|PSB2_SACI9|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain L.D.8.5 /

Query: 2 HEIGKF 7
H+IGKF
Sbjct: 40 HKIGKF 45


>sp|PSB2_SACI7|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 HEIGKF 7
H+IGKF
Sbjct: 40 HKIGKF 45


>sp|PSB2_SACI6|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain M.16.4 /

Query: 2 HEIGKF 7
H+IGKF
Sbjct: 40 HKIGKF 45


>sp|PSB2_SACI4|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain M.14.25 /

Query: 2 HEIGKF 7
H+IGKF
Sbjct: 40 HKIGKF 45


>sp|PSB2_SACI3|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain M.16.27)

Query: 2 HEIGKF 7
H+IGKF
Sbjct: 40 HKIGKF 45


>sp|PSB2_SACI2|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 HEIGKF 7
H+IGKF
Sbjct: 40 HKIGKF 45


>sp|PSB1_SACI1|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 HEIGKF 7
H+IGKF
Sbjct: 40 HKIGKF 45


>sp|TIAS_CALMQ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Caldivirga maquilingensis

Query: 1 SHEIGKFS 8
SH+IGK S
Sbjct: 85 SHKIGKTS 92


>sp|Y179_THEAC|UPF0200 protein Ta0179|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 HEIGKFSET 10
HEIG F+ +
Sbjct: 47 HEIGNFATS 55


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 2 HEIGKF 7
H+IGKF
Sbjct: 17 HDIGKF 22




454|SequenceR|2275|2266|NEEILSHEIG

>sp|HTPX1_SULAC|PROTEASE HtpX homolog 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EEILSHEIG 10
E +L+HE+G
Sbjct: 128 EAVLAHEVG 136


>sp|Y1147_METJA|UNCHARACTERIZED protein MJ1147|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EEILSHEI 9
EEILSH+I
Sbjct: 273 EEILSHKI 280


>sp|RPO3_METJA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanocaldococcus jannaschii (strain

Query: 1 NEEILSHEIG 10
++EIL+H +G
Sbjct: 56 DDEILAHRLG 65


>sp|Y949_METJA|UNCHARACTERIZED protein MJ0949|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EEILSHEIG 10
+EILSH +G
Sbjct: 42 DEILSHILG 50


>sp|GLNA_PYRFU|GLUTAMINE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 EILSHEIG 10
E+L HE+G
Sbjct: 172 EVLHHEVG 179


>sp|GLNA_PYRAB|GLUTAMINE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 3 EILSHEIG 10
E+L HE+G
Sbjct: 172 EVLHHEVG 179


>sp|GLNA_PYRWO|GLUTAMINE synthetase|Pyrococcus woesei

Query: 3 EILSHEIG 10
E+L HE+G
Sbjct: 172 EVLHHEVG 179


>sp|GLNA_PYRHO|GLUTAMINE synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 EILSHEIG 10
E+L HE+G
Sbjct: 176 EVLHHEVG 183


>sp|HTPX_AERPE|PROTEASE HtpX homolog|Aeropyrum pernix (strain ATCC 700893

Query: 4 ILSHEIG 10
+L+HE+G
Sbjct: 131 VLAHEVG 137


>sp|GLNA_THEKO|GLUTAMINE synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 EILSHEIG 10
E+L HE+G
Sbjct: 176 EVLHHEVG 183


>sp|Y921_METJA|UNCHARACTERIZED protein MJ0921|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 ILSHEIG 10
+L+HEIG
Sbjct: 154 VLAHEIG 160


>sp|MTNA_SULAC|PUTATIVE methylthioribose-1-phosphate isomerase|Sulfolobus acidocaldarius

Query: 2 EEILSHEIG 10
E +++HE+G
Sbjct: 276 EAVIAHELG 284


>sp|OTC_METKA|ORNITHINE carbamoyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 NEEILSH 7
NEE++SH
Sbjct: 255 NEELMSH 261


>sp|GCSPB_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 NEEILSH 7
NEEI SH
Sbjct: 89 NEEIASH 95




455|SequenceR|2280|2271|VVVGCNEEIL

>sp|RADA_PYRHO|DNA repair and recombination protein|Pyrococcus horikoshii (strain ATCC

Query: 1 VVVGCNEEIL 10
VVVG EE+L
Sbjct: 267 VVVGVREEVL 276


>sp|RFRNP_ARCFU|RNA-FREE ribonuclease P|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GCNEEIL 10
GC+EEI
Sbjct: 67 GCDEEIF 73


>sp|PELO_HALLT|PROTEIN pelota homolog|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 VVVGCNEE 8
V+VGC+ E
Sbjct: 87 VIVGCSRE 94


>sp|Y3523_METJA|UNCHARACTERIZED protein MJECL23|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VVVGCNEE 8
V++GCN E
Sbjct: 720 VILGCNRE 727




456|SequenceR|2285|2276|VQISEVVVGC

>sp|PURP_THEKO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Thermococcus kodakarensis (strain ATCC

Query: 1 VQISEVVVG 9
VQI E VVG
Sbjct: 167 VQIQEYVVG 175


>sp|PURP_PYRHO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus horikoshii (strain ATCC

Query: 1 VQISEVVVG 9
VQI E VVG
Sbjct: 169 VQIQEYVVG 177


>sp|PURP_PYRAB|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 VQISEVVVG 9
VQI E V+G
Sbjct: 173 VQIQEYVIG 181


>sp|PRIS_SULAC|DNA primase small subunit PriS|Sulfolobus acidocaldarius (strain ATCC

Query: 2 QISEVVVGC 10
+ISE+ V C
Sbjct: 131 EISEITVDC 139




457|SequenceR|2290|2281|GCELTVQISE

>sp|TFRA_METTM|FUMARATE reductase (CoM/CoB) subunit A|Methanothermobacter marburgensis

Query: 1 GCELTVQISE 10
GC +++SE
Sbjct: 19 GCRAAIEVSE 28




458|SequenceR|2295|2286|TRHGLGCELT

>sp|RIBL_METTH|FAD synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 RHGLGCEL 9
R GLGCE+
Sbjct: 110 RRGLGCEV 117


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 2 RHGLGCE 8
R+GLGC+
Sbjct: 405 RYGLGCD 411


>sp|Y804_METJA|UNCHARACTERIZED protein MJ0804|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RHGLGCE 8
RH +GCE
Sbjct: 23 RHCIGCE 29


>sp|COBQ_METMJ|PROBABLE cobyric acid synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 RHGLGCEL 9
RHG+G EL
Sbjct: 306 RHGVGEEL 313


>sp|RIFK_STAMF|RIBOFLAVIN kinase|Staphylothermus marinus (strain ATCC 43588

Query: 2 RHGLGCEL 9
R GLGC L
Sbjct: 64 RKGLGCVL 71


>sp|PURL_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanocaldococcus jannaschii (strain ATCC

Query: 4 GLGCEL 9
G+GCEL
Sbjct: 276 GVGCEL 281


>sp|Y1137_METTH|UNCHARACTERIZED protein MTH_1137|Methanothermobacter thermautotrophicus (strain

Query: 2 RHGLGCELT 10
R LGC+LT
Sbjct: 49 RFPLGCDLT 57


>sp|SYC_META3|CYSTEINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 HGLGCEL 9
HG GC+L
Sbjct: 222 HGGGCDL 228


>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 1 TRHGLGCE 8
T G+GCE
Sbjct: 235 TLEGMGCE 242


>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain Fusaro

Query: 1 TRHGLGCE 8
T G+GCE
Sbjct: 235 TLEGMGCE 242


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 2 RHGLGCEL 9
R GL CE+
Sbjct: 664 RRGLDCEI 671


>sp|PURL_HALSA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 700922

Query: 1 TRHGLGCEL 9
TR+ LGC +
Sbjct: 321 TRYDLGCSV 329


>sp|PURL_HALS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 29341

Query: 1 TRHGLGCEL 9
TR+ LGC +
Sbjct: 321 TRYDLGCSV 329


>sp|CBIT_METTH|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 RHGLGCELT 10
RHGLG +T
Sbjct: 77 RHGLGDNVT 85


>sp|SELD_METMP|SELENIDE, water dikinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 TRHGLGCEL 9
T HG C+L
Sbjct: 3 TLHGUACKL 11




459|SequenceR|2300|2291|LLLPVTRHGL

>sp|RPO1C_THEON|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus onnurineus (strain NA1)

Query: 1 LLLPVTRHGL 10
++LP+ RHG+
Sbjct: 317 VILPIGRHGI 326


>sp|Y1799_ARCFU|UPF0111 protein AF_1799|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLLPVTRHGL 10
L+LPV RH L
Sbjct: 77 LMLPVDRHDL 86


>sp|TRPD_SULAC|ANTHRANILATE phosphoribosyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 LLPVTRHG 9
L PV +HG
Sbjct: 96 LFPVAKHG 103


>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 1 LLLPVTRH 8
L +P+T+H
Sbjct: 117 LFMPITKH 124


>sp|DHYS2_ARCFU|PROBABLE deoxyhypusine synthase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLLPVTRHGL 10
+ LPV HGL
Sbjct: 275 IALPVLAHGL 284


>sp|NQOR_ARCFU|NAD(P)H dehydrogenase (quinone)|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLLPVTRHGL 10
+LLP+ HG+
Sbjct: 133 MLLPLFAHGM 142


>sp|TRPD_SACI7|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 1 LLLPVTRHG 9
L+ PV +HG
Sbjct: 100 LINPVAKHG 108


>sp|TRPD_SACI6|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LLLPVTRHG 9
L+ PV +HG
Sbjct: 100 LINPVAKHG 108


>sp|TRPD_SACI4|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain M.14.25

Query: 1 LLLPVTRHG 9
L+ PV +HG
Sbjct: 100 LINPVAKHG 108


>sp|TRPD_SACI3|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 LLLPVTRHG 9
L+ PV +HG
Sbjct: 100 LINPVAKHG 108


>sp|TRPD_SACI2|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 LLLPVTRHG 9
L+ PV +HG
Sbjct: 100 LINPVAKHG 108


>sp|TRPD_SACI1|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 1 LLLPVTRHG 9
L+ PV +HG
Sbjct: 100 LINPVAKHG 108




460|SequenceR|2305|2296|FKSEALLLPV

>sp|Y620_METKA|UPF0425 pyridoxal phosphate-dependent protein MK0620|Methanopyrus

Query: 1 FKSEALLLP 9
+ SEAL+LP
Sbjct: 57 YLSEALILP 65




461|SequenceR|2310|2301|KINGSFKSEA

>sp|RPO1C_THEGJ|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus gammatolerans (strain DSM

Query: 1 KINGSFKS 8
K++GSFKS
Sbjct: 181 KLSGSFKS 188




462|SequenceR|2315|2306|LSTWNKINGS

>sp|MTM6_METJA|TYPE II methyltransferase M.MjaVI|Methanocaldococcus jannaschii

Query: 1 LSTWNKING 9
+ WNKING
Sbjct: 6 VKIWNKING 14


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LSTWNKING 9
L TW +NG
Sbjct: 442 LETWGDLNG 450


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 STWNKINGS 10
S WNKI+ S
Sbjct: 66 SDWNKIDLS 74


>sp|PHNC2_HALMA|PHOSPHONATES import ATP-binding protein PhnC|Haloarcula marismortui (strain ATCC

Query: 1 LSTWN 5
LSTWN
Sbjct: 108 LSTWN 112


>sp|KAE1B_METM5|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 STWNKI 7
S WNKI
Sbjct: 513 SVWNKI 518


>sp|Y009_METJA|UNCHARACTERIZED protein MJ0009|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 WNKING 9
WN +NG
Sbjct: 114 WNALNG 119


>sp|TRF3_THEVO|TRICORN protease-interacting factor F3|Thermoplasma volcanium (strain

Query: 4 WNKINGS 10
W K+NGS
Sbjct: 43 WIKVNGS 49


>sp|IDI2_METMP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LSTWNKING 9
+S +NKI+G
Sbjct: 182 ISNYNKIHG 190




463|SequenceR|2320|2311|AVAAMLSTWN

>sp|KGSDH_HALVD|ALPHA-KETOGLUTARATE semialdehyde dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 1 AVAAMLSTWN 10
VAA+++ WN
Sbjct: 143 GVAALITPWN 152


>sp|RRP42_THEKO|EXOSOME complex component Rrp42|Thermococcus kodakarensis (strain ATCC

Query: 1 AVAAMLST 8
A+AA+LST
Sbjct: 157 AIAALLST 164


>sp|PYRF_HALLT|OROTIDINE 5'-phosphate decarboxylase|Halorubrum lacusprofundi (strain ATCC

Query: 2 VAAMLSTWN 10
VAA+ WN
Sbjct: 165 VAALADVWN 173




464|SequenceR|2325|2316|QLTVDAVAAM

>sp|SYT_METB6|THREONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 QLTVDAVAA 9
Q+T DA+AA
Sbjct: 579 QMTTDALAA 587


>sp|PYRH_NATPD|URIDYLATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 TVDAVAAM 10
T DAVAAM
Sbjct: 119 TTDAVAAM 126


>sp|PYRH_METKA|URIDYLATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 3 TVDAVAAM 10
T DAVAAM
Sbjct: 117 TTDAVAAM 124




465|SequenceR|2330|2321|NYYHVQLTVD

>sp|PUR7_SULTO|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NYYHVQ 6
NYYH++
Sbjct: 131 NYYHME 136


>sp|PYRG_HALSA|CTP synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 YHVQLTVD 10
YHV LTV+
Sbjct: 254 YHVPLTVE 261


>sp|PYRG_HALS3|CTP synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 YHVQLTVD 10
YHV LTV+
Sbjct: 254 YHVPLTVE 261


>sp|PUR7_SACS2|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NYYHVQ 6
NYYH++
Sbjct: 131 NYYHME 136




466|SequenceR|2335|2326|VAHIENYYHV

>sp|COFH_HALMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Haloarcula marismortui (strain ATCC

Query: 2 AHIENYYH 9
H+EN YH
Sbjct: 283 GHVENEYH 290


>sp|COFH_META3|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus aeolicus (strain ATCC

Query: 2 AHIENYYHV 10
HIE Y H+
Sbjct: 218 GHIEEYKHI 226


>sp|COFH2_METMP|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanococcus maripaludis (strain DSM

Query: 2 AHIENYYHV 10
H+E Y H+
Sbjct: 215 GHVEEYKHI 223


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HIENYY 8
HIEN+Y
Sbjct: 1282 HIENWY 1287


>sp|IF2P_METTH|PROBABLE translation initiation factor IF-2|Methanothermobacter

Query: 5 ENYYHV 10
EN+YH+
Sbjct: 552 ENHYHI 557


>sp|RL6_SULTO|LARGE ribosomal subunit protein uL6|Sulfurisphaera tokodaii (strain DSM

Query: 1 VAHIENYY 8
+AHIEN +
Sbjct: 72 IAHIENMF 79


>sp|RNH2_THEKO|RIBONUCLEASE HII|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 AHIENYY 8
A +ENYY
Sbjct: 178 AFLENYY 184


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 5 ENYYH 9
+NYYH
Sbjct: 326 DNYYH 330


>sp|PURQ_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VAHIENYYHV 10
+AH E Y+V
Sbjct: 137 IAHAEGRYYV 146


>sp|SYP_METS3|PROLINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 HIENYYHV 10
HIENY +
Sbjct: 171 HIENYKEI 178


>sp|PURQ_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Pyrococcus abyssi (strain GE5 /

Query: 1 VAHIENYYHV 10
+AH E Y+V
Sbjct: 139 IAHAEGNYYV 148




467|SequenceR|2340|2331|ILPEWVAHIE

>sp|HIS8_METBF|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ILPEWVA 7
I+PEW+A
Sbjct: 239 IMPEWLA 245


>sp|PGP_THESM|PHOSPHOGLYCOLATE phosphatase|Thermococcus sibiricus (strain DSM 12597

Query: 1 ILPEWVAHI 9
I PE VAHI
Sbjct: 168 ITPEQVAHI 176


>sp|NADM_PICTO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 3 PEWVAHIE 10
P WV+H+E
Sbjct: 80 PLWVSHVE 87


>sp|HIS8_METAC|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ILPEWV 6
ILPEW+
Sbjct: 240 ILPEWL 245


>sp|KADA_METMJ|ADENYLATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LPEWV 6
LPEWV
Sbjct: 105 LPEWV 109


>sp|SECE_METBF|PROTEIN translocase subunit SecE|Methanosarcina barkeri (strain Fusaro /

Query: 1 ILPEWVAH 8
+LP+WVA
Sbjct: 64 MLPQWVAQ 71


>sp|KADA_THEVO|ADENYLATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LPEWV 6
LPEWV
Sbjct: 94 LPEWV 98


>sp|KADA_THEAC|ADENYLATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LPEWV 6
LPEWV
Sbjct: 94 LPEWV 98


>sp|AGLG_HALVD|GLUCOSYL-DOLICHYL phosphate glucuronosyltransferase|Haloferax volcanii (strain ATCC

Query: 1 ILPEWVA 7
++P+WVA
Sbjct: 120 VVPDWVA 126


>sp|SECE_METMA|PROTEIN translocase subunit SecE|Methanosarcina mazei (strain ATCC

Query: 1 ILPEWVAH 8
+LP+WVA
Sbjct: 64 MLPQWVAK 71


>sp|LYSJ_SULTO|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfurisphaera

Query: 2 LPEWVA 7
LP+W+A
Sbjct: 249 LPDWIA 254


>sp|SYT_METS3|THREONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 ILPEWVAHIE 10
+LP W++ IE
Sbjct: 487 MLPTWLSPIE 496


>sp|HIS8_METBU|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 ILPEWV 6
I+PEW+
Sbjct: 237 IMPEWL 242


>sp|HIS8_METMA|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ILPEWV 6
I+PEW+
Sbjct: 241 IMPEWL 246


>sp|CBID_THEAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PEWVAHIE 10
P++ AHIE
Sbjct: 182 PDYEAHIE 189


>sp|CAPPA_METHJ|PHOSPHOENOLPYRUVATE carboxylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 ILPEWV 6
ILP+W+
Sbjct: 437 ILPDWI 442


>sp|LEUC_PYRAR|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum arsenaticum (strain DSM

Query: 2 LPEWVAHI 9
+P W HI
Sbjct: 1 MPTWTEHI 8


>sp|ASST_METAC|L-ASPARTATE semialdehyde sulfurtransferase|Methanosarcina acetivorans (strain

Query: 2 LPEWVAH 8
L EWV H
Sbjct: 344 LKEWVKH 350


>sp|Y1152_METJA|UNCHARACTERIZED protein MJ1152|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILPEWVAHIE 10
ILP+W+ ++
Sbjct: 28 ILPDWIVKVK 37


>sp|RPO1C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanothermobacter thermautotrophicus

Query: 4 EWVAHIE 10
EWV H E
Sbjct: 305 EWVIHTE 311


>sp|RPO1C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanothermobacter thermautotrophicus

Query: 4 EWVAHIE 10
EWV H E
Sbjct: 305 EWVIHTE 311


>sp|PUR5_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ILPEWVAHIE 10
+LP+ V HI+
Sbjct: 136 VLPDVVKHID 145


>sp|NPD_SULAC|NAD-DEPENDENT protein deacetylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ILPEWVAHIE 10
LPE ++HI+
Sbjct: 237 FLPEVISHIQ 246


>sp|TOP6B_METBU|TYPE 2 DNA topoisomerase 6|Methanococcoides burtonii (strain DSM 6242

Query: 1 ILPEWVAHIE 10
ILP+ + HIE
Sbjct: 58 ILPDILLHIE 67


>sp|AATI_PYRAB|A-TYPE ATP synthase subunit I|Pyrococcus abyssi (strain GE5 /

Query: 3 PEWVAHIE 10
PE+++H E
Sbjct: 343 PEFISHFE 350


>sp|GIN23_SACS2|DNA replication complex GINS protein|Saccharolobus solfataricus

Query: 2 LPEWVAHI 9
LP+W+A I
Sbjct: 46 LPQWLAII 53


>sp|CYAS_METB6|CYSTEATE synthase|Methanoregula boonei (strain DSM 21154

Query: 2 LPEWVAH 8
L WVAH
Sbjct: 416 LSRWVAH 422


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 ILPEWVAHI 9
+ PE V+H+
Sbjct: 263 VFPEMVSHV 271


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ILPEWVA 7
+LP+W A
Sbjct: 1382 VLPDWYA 1388


>sp|SECE_METAC|PROTEIN translocase subunit SecE|Methanosarcina acetivorans (strain ATCC

Query: 1 ILPEWVAH 8
+LP+WV+
Sbjct: 64 MLPQWVSQ 71


>sp|NADM_HALMA|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 5 WVAHIE 10
WV+H+E
Sbjct: 81 WVSHVE 86


>sp|HIS81_ARCFU|HISTIDINOL-PHOSPHATE aminotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ILPEWV 6
+LPEW+
Sbjct: 195 LLPEWL 200


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 LPEWVAH 8
+PEW H
Sbjct: 449 IPEWAGH 455




468|SequenceR|2345|2336|GEVREILPEW

>sp|PYRF_HALLT|OROTIDINE 5'-phosphate decarboxylase|Halorubrum lacusprofundi (strain ATCC

Query: 1 GEVREILPE 9
EVREI+PE
Sbjct: 191 AEVREIVPE 199


>sp|Y1155_METJA|UPF0313 protein MJ1155|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GEVREILPEW 10
G ++E+LP W
Sbjct: 473 GGIKEVLPYW 482


>sp|Y772_METJA|UNCHARACTERIZED protein MJ0772|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EVREILPE 9
E+REI PE
Sbjct: 176 EIREIFPE 183


>sp|TRM10_THEKO|TRNA (guanine(9)-/adenine(9)-N1)-methyltransferase|Thermococcus

Query: 2 EVREILPEW 10
E+RE LP+W
Sbjct: 90 ELREKLPDW 98


>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GEVREILPEW 10
G VRE+ P+W
Sbjct: 15 GIVREMAPDW 24


>sp|KHSE_METJA|HOMOSERINE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EVREILPE 9
E REILP+
Sbjct: 181 EAREILPK 188


>sp|APE1_SULTO|PROBABLE aminopeptidase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 VREILPEW 10
++EI P+W
Sbjct: 304 LKEIFPQW 311


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 3 VREILPEW 10
V E+LP+W
Sbjct: 1379 VPEVLPDW 1386


>sp|Y1724_ARCFU|UNCHARACTERIZED protein AF_1724|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GEVREILP 8
GEVR+ LP
Sbjct: 35 GEVRDFLP 42


>sp|CDVB_SULAC|CELL division protein B|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EVREILPE 9
+VRE+LPE
Sbjct: 181 KVRELLPE 188


>sp|FTTA_THEKO|TRANSCRIPTION termination factor FttA|Thermococcus kodakarensis (strain ATCC

Query: 1 GEVREILPE 9
GEVR+I P+
Sbjct: 323 GEVRDIAPD 331


>sp|MCRX_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 GEVREILPE 9
G +RE +PE
Sbjct: 534 GALREFMPE 542


>sp|MCRX_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 GEVREILPE 9
G +RE +PE
Sbjct: 534 GALREFMPE 542


>sp|FWDC_METJA|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanocaldococcus

Query: 1 GEVREILPEW 10
G+V EILP +
Sbjct: 211 GKVEEILPSF 220


>sp|Y138_METJA|PUTATIVE glutamine amidotransferase-like protein MJ0138|Methanocaldococcus

Query: 1 GEVREILP 8
G+VR+I+P
Sbjct: 279 GDVRDIVP 286


>sp|MFNB_METS3|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 EVREILPE 9
++REI PE
Sbjct: 44 DIREITPE 51


>sp|FTTA_PYRAB|TRANSCRIPTION termination factor FttA|Pyrococcus abyssi (strain GE5 /

Query: 1 GEVREILPE 9
GEVR+I P+
Sbjct: 323 GEVRDISPD 331


>sp|FTTA_PYRHO|TRANSCRIPTION termination factor FttA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GEVREILPE 9
GEVR+I P+
Sbjct: 326 GEVRDISPD 334


>sp|RLME_METHJ|RIBOSOMAL RNA large subunit methyltransferase|Methanospirillum hungatei JF-1

Query: 1 GEVREILPE 9
++RE++PE
Sbjct: 93 AQIRELMPE 101


>sp|AATA_THEPD|A-TYPE ATP synthase subunit A|Thermofilum pendens (strain DSM 2475

Query: 1 GEVREILPE 9
G+V+E++PE
Sbjct: 159 GKVKEVVPE 167


>sp|ADHS2_ARCFU|PUTATIVE 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase

Query: 1 GEVREILPEW 10
GE+ +I EW
Sbjct: 129 GEISKIAGEW 138


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 REILPEW 10
REI PEW
Sbjct: 39 REIEPEW 45


>sp|PGP_HALLT|PHOSPHOGLYCOLATE phosphatase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 VREILPEW 10
V E+LP+W
Sbjct: 24 VFELLPDW 31


>sp|HPS_METBF|3-HEXULOSE-6-PHOSPHATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 EVREILPE 9
E+REIL E
Sbjct: 213 EIREILKE 220


>sp|Y1865_ARCFU|UNCHARACTERIZED protein AF_1865|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EVREILPEW 10
+VR +L EW
Sbjct: 296 DVRNVLREW 304


>sp|CAS1_METKA|CRISPR-ASSOCIATED endonuclease Cas1|Methanopyrus kandleri (strain AV19 /

Query: 5 EILPEW 10
E+LP+W
Sbjct: 168 EVLPDW 173


>sp|RNH2_ARCFU|RIBONUCLEASE HII|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VREILPEW 10
RE+L EW
Sbjct: 170 TREVLKEW 177


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 GEVREILPE 9
GE REIL E
Sbjct: 277 GEAREILGE 285




469|SequenceR|2350|2341|NWQRKGEVRE

>sp|TRPF_NATPD|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 NWQRKGEVRE 10
+W R GE+ E
Sbjct: 141 DWDRTGELVE 150


>sp|COFE_METTH|COENZYME F420:L-glutamate ligase|Methanothermobacter thermautotrophicus

Query: 2 WQRKGE 7
W RKGE
Sbjct: 180 WDRKGE 185


>sp|COFE_METMP|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 WQRKGE 7
W RKGE
Sbjct: 179 WDRKGE 184


>sp|COFE_METM7|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C7 /

Query: 2 WQRKGE 7
W RKGE
Sbjct: 179 WDRKGE 184


>sp|ENGB_METKA|PROBABLE GTP-binding protein EngB|Methanopyrus kandleri (strain AV19 /

Query: 2 WQRKGEV 8
W+R+GE+
Sbjct: 104 WERRGEI 110


>sp|RL2_PYRNV|LARGE ribosomal subunit protein uL2|Pyrobaculum neutrophilum (strain

Query: 1 NWQRKGEVR 9
+W+R+G VR
Sbjct: 21 SWRREGPVR 29


>sp|GCSPA_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 1 NWQRKGEV 8
NW +G+V
Sbjct: 187 NWNERGQV 194


>sp|COFE_METM6|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C6 /

Query: 2 WQRKGE 7
W RKGE
Sbjct: 179 WDRKGE 184


>sp|COFE_METJA|COENZYME F420:L-glutamate ligase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 WQRKGE 7
W RKGE
Sbjct: 179 WDRKGE 184


>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 1 NWQRKGEV 8
NW GEV
Sbjct: 135 NWDEYGEV 142




470|SequenceR|2355|2346|VDLRLNWQRK

>sp|PHAC_HALHT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloarcula hispanica (strain ATCC 33960

Query: 5 LNWQRK 10
LNWQRK
Sbjct: 13 LNWQRK 18


>sp|PHAC_HALMA|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloarcula marismortui (strain ATCC 43049

Query: 5 LNWQRK 10
LNWQRK
Sbjct: 13 LNWQRK 18


>sp|TDXH2_THEAC|PEROXIREDOXIN 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 LRLNWQRK 10
L+ NW+RK
Sbjct: 150 LQFNWERK 157


>sp|NCPP_SACS2|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus solfataricus

Query: 3 LRLNW 7
LRLNW
Sbjct: 24 LRLNW 28


>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 3 LRLNW 7
LRLNW
Sbjct: 254 LRLNW 258


>sp|GLPK_HALSA|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 DLRLNWQ 8
DLR NW+
Sbjct: 469 DLRENWR 475


>sp|GLPK_HALS3|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 29341

Query: 2 DLRLNWQ 8
DLR NW+
Sbjct: 469 DLRENWR 475


>sp|Y015_METJA|UNCHARACTERIZED protein MJ0015|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LRLNWQ 8
+RLNWQ
Sbjct: 2 MRLNWQ 7


>sp|GLPK_HALVD|GLYCEROL kinase|Haloferax volcanii (strain ATCC 29605

Query: 2 DLRLNWQ 8
+LR NWQ
Sbjct: 470 ELRENWQ 476




471|SequenceR|2360|2351|VPNKKVDLRL

>sp|SEPS_METMJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 NKKVDLR 9
NKKVDLR
Sbjct: 508 NKKVDLR 514


>sp|SYE_METM6|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 NKKVDLRL 10
NKK+DLR+
Sbjct: 417 NKKIDLRM 424


>sp|Y356_METJA|UNCHARACTERIZED protein MJ0356|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PNKKVDLR 9
PNK +DLR
Sbjct: 72 PNKIIDLR 79


>sp|SEPS_METAC|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 NKKVDLR 9
NKK+D+R
Sbjct: 521 NKKIDMR 527


>sp|ILVD_METTP|DIHYDROXY-ACID dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VPNKKVDL 8
+PN+++DL
Sbjct: 498 IPNRRLDL 505


>sp|FMDC_METBF|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanosarcina barkeri

Query: 1 VPNKKVDLRL 10
+P K +D++L
Sbjct: 39 IPKKAIDIKL 48


>sp|SEPS_METMA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 NKKVDLR 9
NKK+D+R
Sbjct: 521 NKKIDIR 527


>sp|SYE_METMP|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 NKKVDLRL 10
N+K+DLR+
Sbjct: 417 NRKIDLRM 424


>sp|AATD_THEON|A-TYPE ATP synthase subunit D|Thermococcus onnurineus (strain NA1)

Query: 2 PNKKVDLR 9
PNK+VD++
Sbjct: 88 PNKEVDIK 95


>sp|AROC_SULAC|CHORISMATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PNKKVDLR 9
P K VDLR
Sbjct: 310 PQKTVDLR 317


>sp|RL44E_METTH|LARGE ribosomal subunit protein eL42|Methanothermobacter

Query: 2 PNKKVDLRL 10
P KK+DLRL
Sbjct: 60 PVKKLDLRL 68


>sp|RL44E_METJA|LARGE ribosomal subunit protein eL42|Methanocaldococcus jannaschii

Query: 2 PNKKVDLRL 10
P KK+DLR
Sbjct: 60 PVKKIDLRF 68


>sp|Y1691_METM7|UPF0305 protein MmarC7_1691|Methanococcus maripaludis (strain C7 /

Query: 4 KKVDLRL 10
KKVDLRL
Sbjct: 78 KKVDLRL 84


>sp|AATB_METBU|A-TYPE ATP synthase subunit B|Methanococcoides burtonii (strain DSM 6242

Query: 1 VPNKKVDL 8
+P+K+VD+
Sbjct: 103 IPDKRVDI 110


>sp|COFH_METBU|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcoides burtonii (strain DSM

Query: 1 VPNKKVDL 8
+PN K+DL
Sbjct: 105 LPNVKIDL 112


>sp|AATI_THEAC|A-TYPE ATP synthase subunit I|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VPNKKVDLR 9
+P+K VD++
Sbjct: 142 IPDKNVDIK 150


>sp|BSUHB_METJA|FRUCTOSE-1,6-BISPHOSPHATASE/INOSITOL-1-MONOPHOSPHATASE jannaschii (strain ATCC 43067

Query: 2 PNKKVDL 8
P+KK+DL
Sbjct: 153 PSKKIDL 159


>sp|SYE_METM7|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 NKKVDLRL 10
+KK+DLR+
Sbjct: 417 SKKIDLRM 424


>sp|QUEC2_SULTO|7-CYANO-7-DEAZAGUANINE synthase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PNKKVDLRL 10
PNKKV++ +
Sbjct: 391 PNKKVEVMM 399


>sp|ILVD_METJA|DIHYDROXY-ACID dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NKKVDLRL 10
NKK+DL L
Sbjct: 503 NKKLDLAL 510




472|SequenceR|2365|2356|LSKDQVPNKK

>sp|Y486_METJA|UNCHARACTERIZED protein MJ0486|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LSKDQVP 7
LSKD+VP
Sbjct: 279 LSKDKVP 285


>sp|FRHD_METJA|COENZYME F420 hydrogenase subunit delta|Methanocaldococcus jannaschii

Query: 1 LSKDQVPNKK 10
+ KD++PN K
Sbjct: 107 IEKDELPNPK 116




473|SequenceR|2370|2361|DDGPLLSKDQ

>sp|RL32_PICTO|LARGE ribosomal subunit protein eL32|Picrophilus torridus (strain ATCC

Query: 4 PLLSKDQ 10
PLLSKD+
Sbjct: 5 PLLSKDE 11


>sp|TREH_THEVO|TREHALASE volcanium (strain ATCC 51530

Query: 2 DGPLLSKDQ 10
D P++ KDQ
Sbjct: 157 DKPIIEKDQ 165


>sp|IF6_THEGJ|TRANSLATION initiation factor 6|Thermococcus gammatolerans (strain DSM 15229

Query: 1 DDGPLLSKD 9
D G L+SKD
Sbjct: 114 DKGALVSKD 122


>sp|KDGA_SULAC|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GPLLSKDQ 10
GP LSKD+
Sbjct: 46 GPALSKDE 53


>sp|AROA_METAR|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocella arvoryzae (strain DSM

Query: 3 GPLLSKD 9
GPLLS D
Sbjct: 40 GPLLSAD 46


>sp|ARFB_METST|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanosphaera stadtmanae (strain

Query: 1 DDGPLLSKD 9
D G +LSKD
Sbjct: 11 DSGNILSKD 19


>sp|DTDA_HALSA|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DDGPLLS 7
D GPLLS
Sbjct: 74 DTGPLLS 80


>sp|DTDA_HALS3|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DDGPLLS 7
D GPLLS
Sbjct: 74 DTGPLLS 80




474|SequenceR|2375|2366|PEPIFDDGPL

>sp|COXX_HALMA|PROTOHEME IX farnesyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PEPIFDDGP 9
PEP DD P
Sbjct: 158 PEPAGDDTP 166


>sp|DNAG_METM7|DNA primase DnaG|Methanococcus maripaludis (strain C7 /

Query: 2 EPIFDD 7
EP+FDD
Sbjct: 309 EPVFDD 314


>sp|PGMUT_SULTO|PHOSPHOGLUCOSAMINE/PHOSPHOGALACTOSAMINE mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PEPIFD 6
PEP FD
Sbjct: 215 PEPTFD 220


>sp|ILVD_HALMA|DIHYDROXY-ACID dehydratase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PEPIFDDGPL 10
PEP +D G L
Sbjct: 543 PEPTYDSGVL 552


>sp|EF2_METST|ELONGATION factor 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 EPIFDDGPL 10
E DDGPL
Sbjct: 566 ESALDDGPL 574


>sp|PUR7_NITMS|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 PEPIFD 6
PEPIFD
Sbjct: 118 PEPIFD 123


>sp|GGR_SULAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EPIFDDG 8
+PIF+DG
Sbjct: 124 KPIFEDG 130


>sp|MSRB_METBF|PEPTIDE methionine sulfoxide reductase MsrB|Methanosarcina barkeri (strain

Query: 4 IFDDGP 9
+F+DGP
Sbjct: 108 VFEDGP 113


>sp|MSRB_METMA|PEPTIDE methionine sulfoxide reductase MsrB|Methanosarcina mazei (strain

Query: 4 IFDDGP 9
+F+DGP
Sbjct: 108 VFEDGP 113


>sp|VHUB_METJA|POLYFERREDOXIN protein VhuB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PEPIFDDG 8
P PI D+G
Sbjct: 264 PHPITDEG 271


>sp|MSRB_METTH|PEPTIDE methionine sulfoxide reductase MsrB|Methanothermobacter

Query: 4 IFDDGP 9
+FDDGP
Sbjct: 123 VFDDGP 128


>sp|GCH1L_METJA|GTP cyclohydrolase 1 type 2|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PEPIFDDG 8
P+P++D+G
Sbjct: 121 PKPLYDNG 128


>sp|TF2B_METKA|TRANSCRIPTION initiation factor IIB|Methanopyrus kandleri (strain AV19 /

Query: 2 EPIFDDGP 9
+P+ D GP
Sbjct: 43 DPVIDPGP 50


>sp|EF2_HALMA|ELONGATION factor 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 EPIFDDGPL 10
E DDGPL
Sbjct: 565 EEALDDGPL 573


>sp|CDC62_ARCFU|ORC1-TYPE DNA replication protein 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EPIFDDG 8
E +FDDG
Sbjct: 228 EGVFDDG 234


>sp|PCP_PYRAB|PYRROLIDONE-CARBOXYLATE peptidase|Pyrococcus abyssi (strain GE5 /

Query: 2 EPIFDDGP 9
EPI ++GP
Sbjct: 101 EPIVENGP 108




475|SequenceR|2380|2371|HIAMQPEPIF

>sp|PGMUT_SULTO|PHOSPHOGLUCOSAMINE/PHOSPHOGALACTOSAMINE mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 AMQPEPIF 10
A QPEP F
Sbjct: 212 ARQPEPTF 219


>sp|IF2P_HALSA|PROBABLE translation initiation factor IF-2|Halobacterium salinarum (strain

Query: 2 IAMQPEPI 9
+ QPEPI
Sbjct: 274 VGAQPEPI 281


>sp|IF2P_HALS3|PROBABLE translation initiation factor IF-2|Halobacterium salinarum (strain

Query: 2 IAMQPEPI 9
+ QPEPI
Sbjct: 274 VGAQPEPI 281


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 5 QPEPIF 10
+PEPIF
Sbjct: 528 EPEPIF 533


>sp|SYFA_METHJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 HIAMQPEP 8
H+A PEP
Sbjct: 324 HLAAHPEP 331


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 HIAMQPEPIF 10
H+ +P P+F
Sbjct: 528 HVVGKPAPVF 537


>sp|ECFA_METJA|ENERGY-COUPLING factor transporter ATP-binding protein|Methanocaldococcus

Query: 2 IAMQPEPI 9
+AMQPE I
Sbjct: 154 LAMQPEVI 161


>sp|SYE_THEKO|GLUTAMATE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 QPEPIF 10
+PEPIF
Sbjct: 148 RPEPIF 153


>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IAMQPEP 8
IAM+P+P
Sbjct: 62 IAMRPDP 68


>sp|SYE_PYRHO|GLUTAMATE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 QPEPIF 10
+PEPIF
Sbjct: 146 RPEPIF 151


>sp|SYE_PYRAB|GLUTAMATE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 5 QPEPIF 10
+PEPIF
Sbjct: 147 RPEPIF 152




476|SequenceR|2385|2376|NGSSIHIAMQ

>sp|TRUD_META3|PROBABLE tRNA pseudouridine synthase D|Methanococcus aeolicus (strain ATCC

Query: 1 NGSSIHIAMQ 10
NGS IH M+
Sbjct: 54 NGSFIHFTME 63


>sp|DPCKG_PYRHO|GTP-DEPENDENT dephospho-CoA kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NGSSIHIAM 9
NG S+HI +
Sbjct: 114 NGKSVHIVV 122


>sp|DIPPS_THEKO|BIFUNCTIONAL IPC transferase and DIPP|Thermococcus kodakarensis (strain ATCC

Query: 1 NGSSIHIAMQ 10
NG S+H+A +
Sbjct: 83 NGHSLHLAKE 92


>sp|TRUD_METVS|PROBABLE tRNA pseudouridine synthase D|Methanococcus vannielii (strain

Query: 1 NGSSIHIAMQ 10
NGS IH ++
Sbjct: 53 NGSFIHFTLE 62




477|SequenceR|2390|2381|TINMTNGSSI

***** No hits found ******


478|SequenceR|2395|2386|CSKSITINMT

***** No hits found ******


479|SequenceR|2400|2391|NFVNLCSKSI

>sp|COFH_METTH|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanothermobacter

Query: 1 NFVNLCS 7
NF N+CS
Sbjct: 63 NFTNICS 69


>sp|GUAAA_IGNH4|GMP synthase [glutamine-hydrolyzing] subunit A|Ignicoccus hospitalis

Query: 1 NFVNLCSK 8
NFV LC +
Sbjct: 181 NFVELCKR 188


>sp|COFH1_METMP|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanococcus maripaludis (strain

Query: 1 NFVNLCS 7
NF N+CS
Sbjct: 54 NFTNVCS 60


>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NFVNLC 6
NFV+LC
Sbjct: 160 NFVDLC 165


>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NFVNLC 6
NFV+LC
Sbjct: 160 NFVDLC 165


>sp|COFH_METM6|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C6

Query: 1 NFVNLCS 7
NF N+CS
Sbjct: 54 NFTNICS 60


>sp|COFH_METM5|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C5

Query: 1 NFVNLCS 7
NF N+CS
Sbjct: 54 NFTNVCS 60


>sp|GUAAA_ARCFU|GMP synthase [glutamine-hydrolyzing] subunit A|Archaeoglobus fulgidus

Query: 1 NFVNLCSK 8
NF+ +C K
Sbjct: 176 NFIEICKK 183


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NFVNLCSK 8
NFVN C +
Sbjct: 114 NFVNKCKE 121


>sp|GUAAA_SULAC|GMP synthase [glutamine-hydrolyzing] subunit A|Sulfolobus

Query: 1 NFVNLCSK 8
NF+ +C K
Sbjct: 181 NFIKICRK 188


>sp|COFH_METM7|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C7

Query: 1 NFVNLCS 7
NF N+C+
Sbjct: 54 NFTNICT 60


>sp|COFH_METVS|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus vannielii (strain ATCC

Query: 1 NFVNLCS 7
NF N+CS
Sbjct: 54 NFTNVCS 60


>sp|Y021_METJA|PUTATIVE glycyl-radical enzyme activating enzyme|Methanocaldococcus

Query: 1 NFVNLCSKSI 10
N +NLC+K I
Sbjct: 159 NKLNLCNKYI 168




480|SequenceR|2405|2396|GKALNNFVNL

>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 KALNNFV 8
K+LNNFV
Sbjct: 525 KSLNNFV 531


>sp|SRP54_THEON|SIGNAL recognition particle 54 kDa|Thermococcus onnurineus (strain NA1)

Query: 1 GKALNN 6
GKALNN
Sbjct: 7 GKALNN 12


>sp|DAPF_METAR|DIAMINOPIMELATE epimerase|Methanocella arvoryzae (strain DSM 22066

Query: 3 ALNNFVN 9
LNNF+N
Sbjct: 138 GLNNFIN 144




481|SequenceR|2410|2401|TGESFGKALN

>sp|SECF_METP4|PROTEIN-EXPORT membrane protein SecF|Methanolacinia petrolearia (strain DSM 11571

Query: 2 GESFGKAL 9
GE+FGK L
Sbjct: 116 GETFGKTL 123


>sp|Y1460_METJA|UNCHARACTERIZED protein MJ1460|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GESFGKALN 10
GE FGK L+
Sbjct: 56 GEEFGKMLS 64


>sp|AROC_META3|CHORISMATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GESFGKAL 9
GES GKAL
Sbjct: 14 GESHGKAL 21


>sp|RNH2_THEKO|RIBONUCLEASE HII|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 ESFGKALN 10
E+F KALN
Sbjct: 86 ENFAKALN 93


>sp|SYH_HALSA|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 TGESFGKALN 10
TG SFG +N
Sbjct: 369 TGRSFGAQMN 378


>sp|SYH_HALS3|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 TGESFGKALN 10
TG SFG +N
Sbjct: 369 TGRSFGAQMN 378


>sp|AROC_METMP|CHORISMATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GESFGKAL 9
GES GKAL
Sbjct: 14 GESHGKAL 21


>sp|Y300_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0300|Methanocaldococcus

Query: 1 TGESFGKALN 10
T E+F KALN
Sbjct: 201 TREAFIKALN 210


>sp|Y1584_METJA|UNCHARACTERIZED protein MJ1584|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TGESFGKAL 9
GESFGK +
Sbjct: 112 IGESFGKKV 120


>sp|SRP54_THEGJ|SIGNAL recognition particle 54 kDa|Thermococcus gammatolerans (strain

Query: 3 ESFGKALN 10
E GKALN
Sbjct: 4 EKLGKALN 11


>sp|AROC_PYRIL|CHORISMATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GESFGKAL 9
GES GKA+
Sbjct: 14 GESHGKAI 21


>sp|AROC_METM7|CHORISMATE synthase|Methanococcus maripaludis (strain C7 /

Query: 2 GESFGKAL 9
GES GKAL
Sbjct: 14 GESHGKAL 21


>sp|AROC_METBU|CHORISMATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GESFGKAL 9
GES G+AL
Sbjct: 16 GESHGRAL 23


>sp|AROC_PYRNV|CHORISMATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 GESFGKAL 9
GES GKA+
Sbjct: 14 GESHGKAI 21


>sp|AROC_IGNH4|CHORISMATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GESFGKAL 9
GES GKA+
Sbjct: 16 GESHGKAI 23


>sp|AROC_PYRAE|CHORISMATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GESFGKAL 9
GES GKA+
Sbjct: 14 GESHGKAV 21


>sp|AROC_METVS|CHORISMATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GESFGKAL 9
GES GKAL
Sbjct: 15 GESHGKAL 22


>sp|AROC_METM5|CHORISMATE synthase|Methanococcus maripaludis (strain C5 /

Query: 2 GESFGKAL 9
GES GKAL
Sbjct: 14 GESHGKAL 21


>sp|SRP54_THEON|SIGNAL recognition particle 54 kDa|Thermococcus onnurineus (strain NA1)

Query: 3 ESFGKALN 10
E GKALN
Sbjct: 4 EKLGKALN 11


>sp|SRP54_METJA|SIGNAL recognition particle 54 kDa|Methanocaldococcus jannaschii (strain

Query: 2 GESFGKALN 10
GE+ KALN
Sbjct: 6 GENLNKALN 14


>sp|AROC_PYRCJ|CHORISMATE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GESFGKAL 9
GES GKA+
Sbjct: 14 GESHGKAV 21




482|SequenceR|2415|2406|DFTSATGESF

>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FTSATGESF 10
FT TGE++
Sbjct: 642 FTQRTGENY 650


>sp|CIMA_METKA|PUTATIVE (R)-citramalate synthase CimA|Methanopyrus kandleri (strain AV19 /

Query: 1 DFTSATGE 8
DFT+ TG+
Sbjct: 394 DFTTVTGK 401




483|SequenceR|2420|2411|DKLSYDFTSA

>sp|METXA_METRM|HOMOSERINE O-acetyltransferase|Methanobrevibacter ruminantium (strain ATCC

Query: 1 DKLSYDFT 8
D+LSYDFT
Sbjct: 247 DQLSYDFT 254


>sp|Y1537_METJA|UNCHARACTERIZED protein MJ1537|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LSYDFTS 9
+SYDFTS
Sbjct: 53 ISYDFTS 59


>sp|RL11_HALMA|LARGE ribosomal subunit protein uL11|Haloarcula marismortui (strain ATCC

Query: 1 DKLSYDFTSA 10
D LSYD T+A
Sbjct: 111 DLLSYDLTNA 120


>sp|PYRH_PYRAB|URIDYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 DKLSYDFT 8
DKLSY+ T
Sbjct: 23 DKLSYELT 30


>sp|PCNA2_PYRAE|DNA polymerase sliding clamp 2|Pyrobaculum aerophilum (strain ATCC

Query: 2 KLSYDFTSA 10
+L+Y+FTS
Sbjct: 237 RLTYEFTSG 245


>sp|RL30_SULAC|LARGE ribosomal subunit protein uL30|Sulfolobus acidocaldarius (strain

Query: 1 DKLSYDFTS 9
DKL+ DF S
Sbjct: 87 DKLNVDFQS 95


>sp|METXA_METST|HOMOSERINE O-acetyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DKLSYDFTS 9
+K SYDF++
Sbjct: 248 NKFSYDFST 256


>sp|MCRX_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 3 LSYDFTS 9
LS+DFTS
Sbjct: 520 LSFDFTS 526


>sp|METXA_METAC|HOMOSERINE O-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LSYDFT 8
LSYDFT
Sbjct: 298 LSYDFT 303


>sp|KDXD_HALVD|PROBABLE 2-keto-3-deoxyxylonate dehydratase|Haloferax volcanii (strain

Query: 1 DKLSYDFTSA 10
D +YD TSA
Sbjct: 19 DSTTYDLTSA 28


>sp|DPHB_METMP|DIPHTHINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DKLSYDFTS 9
D L+YDF S
Sbjct: 221 DLLNYDFKS 229




484|SequenceR|2425|2416|TFPARDKLSY

>sp|DPHB_METS5|DIPHTHINE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 TFPARDKLSY 10
TFP DKL Y
Sbjct: 138 TFPVLDKLDY 147


>sp|ELP3_METJA|TRNA uridine(34) acetyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 TFPARD 6
TFPARD
Sbjct: 165 TFPARD 170


>sp|GFPS_METMA|GERANYLFARNESYL diphosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PARDKL 8
PARDKL
Sbjct: 275 PARDKL 280


>sp|FAEHP_METAR|BIFUNCTIONAL enzyme Fae/Hps|Methanocella arvoryzae (strain DSM 22066

Query: 2 FPARDKLSY 10
FP DK++Y
Sbjct: 144 FPGVDKVTY 152


>sp|PURO_METM7|IMP cyclohydrolase|Methanococcus maripaludis (strain C7 /

Query: 2 FPARDKLSY 10
P RD LSY
Sbjct: 88 LPIRDALSY 96


>sp|PURO_METM6|IMP cyclohydrolase|Methanococcus maripaludis (strain C6 /

Query: 2 FPARDKLSY 10
P RD LSY
Sbjct: 88 LPIRDALSY 96


>sp|PURO_METM5|IMP cyclohydrolase|Methanococcus maripaludis (strain C5 /

Query: 2 FPARDKLSY 10
P RD LSY
Sbjct: 88 LPIRDALSY 96


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 3 PARDKLS 9
PARDKL+
Sbjct: 107 PARDKLA 113


>sp|PURO_METVS|IMP cyclohydrolase|Methanococcus vannielii (strain ATCC 35089

Query: 2 FPARDKLSY 10
P RD LSY
Sbjct: 88 LPIRDALSY 96


>sp|TRPD_IGNH4|ANTHRANILATE phosphoribosyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 FPARDKLSY 10
F RDK+SY
Sbjct: 237 FVDRDKISY 245


>sp|PURO_METMP|IMP cyclohydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 2 FPARDKLSY 10
P RD LSY
Sbjct: 88 LPIRDALSY 96


>sp|Y3405_METJA|UNCHARACTERIZED protein MJECS05|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TFPARDKLSY 10
T PA +KL +
Sbjct: 74 TLPANEKLEF 83


>sp|AGLB3_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 ARDKLSY 10
AR+KLSY
Sbjct: 462 ARNKLSY 468




485|SequenceR|2430|2421|VANKVTFPAR

>sp|Y1369_METJA|UNCHARACTERIZED protein MJ1369|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NKVTFPAR 10
NKVTFP R
Sbjct: 94 NKVTFPWR 101


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 1 VANKVTFP 8
+ANK+ FP
Sbjct: 686 MANKIGFP 693




486|SequenceR|2435|2426|KIPVGVANKV

>sp|THII_ARCFU|PROBABLE tRNA sulfurtransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IPVGVANKV 10
+PVGVA KV
Sbjct: 160 LPVGVAGKV 168


>sp|DTDA_METBU|D-AMINOACYL-TRNA deacylase|Methanococcoides burtonii (strain DSM 6242

Query: 1 KIPVGVANKV 10
K+PVG+ +K+
Sbjct: 314 KVPVGLKDKL 323


>sp|NSUN6_PYRHO|TRNA (cytosine(72)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 1 KIPVGVANK 9
K+PV VANK
Sbjct: 91 KLPVVVANK 99


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KIPVGVANK 9
+IP+GV +K
Sbjct: 106 QIPIGVISK 114


>sp|THII_SACS2|PROBABLE tRNA sulfurtransferase|Saccharolobus solfataricus (strain ATCC

Query: 2 IPVGVANKV 10
+PVGVA K
Sbjct: 163 LPVGVAGKT 171


>sp|THII_SACI6|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 IPVGVANK 9
+PVGVA K
Sbjct: 165 LPVGVAGK 172


>sp|THII_SACI3|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain M.16.27)

Query: 2 IPVGVANK 9
+PVGVA K
Sbjct: 165 LPVGVAGK 172


>sp|THII_SACI4|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 IPVGVANK 9
+PVGVA K
Sbjct: 165 LPVGVAGK 172


>sp|THII_SACI7|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 IPVGVANK 9
+PVGVA K
Sbjct: 165 LPVGVAGK 172


>sp|THII_SACI1|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 IPVGVANK 9
+PVGVA K
Sbjct: 165 LPVGVAGK 172


>sp|THII_SACI2|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 IPVGVANK 9
+PVGVA K
Sbjct: 165 LPVGVAGK 172


>sp|LADH_META3|LACTALDEHYDE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KIPVGVAN 8
KIP+GV N
Sbjct: 187 KIPLGVFN 194


>sp|AATA_THEPD|A-TYPE ATP synthase subunit A|Thermofilum pendens (strain DSM 2475

Query: 2 IPVGVANKV 10
+P+GV+ KV
Sbjct: 153 VPIGVSGKV 161




487|SequenceR|2440|2431|CNPKVKIPVG

>sp|PFDA_PYRFU|PREFOLDIN subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NPKVKIPVG 10
NP++ +P+G
Sbjct: 55 NPEILVPIG 63


>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PKVKIPV 9
PK+K+PV
Sbjct: 503 PKIKLPV 509


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 1 CNPKVKIPV 9
C P K+PV
Sbjct: 465 CTPNHKVPV 473


>sp|SYDND_SULTO|ASPARTATE--TRNA(ASP/ASN) ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PKVKIPV 9
P+VKIP+
Sbjct: 269 PEVKIPI 275


>sp|SYH_METLZ|HISTIDINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 CNPKVKIP 8
C P+ +IP
Sbjct: 324 CTPETRIP 331


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 CNPKVKIPV 9
C P K+PV
Sbjct: 462 CTPNHKLPV 470


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 1 CNPKVKIPV 9
C P K+PV
Sbjct: 462 CTPNHKLPV 470


>sp|DTDA_METBU|D-AMINOACYL-TRNA deacylase|Methanococcoides burtonii (strain DSM 6242

Query: 4 KVKIPVG 10
+VK+PVG
Sbjct: 312 RVKVPVG 318


>sp|MCRX_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 2 NPKVKIPVG 10
NP + +P+G
Sbjct: 60 NPDIGVPLG 68


>sp|MCRX_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 2 NPKVKIPVG 10
NP + +P+G
Sbjct: 60 NPDIGVPLG 68


>sp|MCRX_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 NPKVKIPVG 10
NP + +P+G
Sbjct: 60 NPDIGVPLG 68


>sp|MCRX_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 2 NPKVKIPVG 10
NP + +P+G
Sbjct: 61 NPDIGVPLG 69


>sp|MCRA_METVO|METHYL-COENZYME M reductase subunit alpha|Methanococcus voltae

Query: 2 NPKVKIPVG 10
NP + +P+G
Sbjct: 61 NPDIGVPLG 69


>sp|MCRA_METVA|METHYL-COENZYME M reductase subunit alpha|Methanococcus vannielii

Query: 2 NPKVKIPVG 10
NP + +P+G
Sbjct: 61 NPDIGVPLG 69


>sp|MCRA_METKA|METHYL-COENZYME M reductase I subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 NPKVKIPVG 10
NP + +P+G
Sbjct: 60 NPDIGVPLG 68


>sp|MCRA_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 NPKVKIPVG 10
NP + +P+G
Sbjct: 60 NPDIGVPLG 68


>sp|HIS5_SULAC|IMIDAZOLE glycerol phosphate synthase subunit|Sulfolobus acidocaldarius

Query: 2 NPKVKIP 8
+P+VKIP
Sbjct: 107 HPRVKIP 113


>sp|NADB_SULTO|L-ASPARTATE oxidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 NPKVKIPV 9
N KVKIP+
Sbjct: 301 NYKVKIPI 308


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CNPKVKIPV 9
C P KIP+
Sbjct: 481 CTPNHKIPL 489


>sp|GCSPA_METS5|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Metallosphaera

Query: 5 VKIPVG 10
VKIPVG
Sbjct: 185 VKIPVG 190


>sp|SFSA_THEVO|SUGAR fermentation stimulation protein homolog|Thermoplasma volcanium

Query: 1 CNPKVKI 7
C P+VKI
Sbjct: 92 CKPEVKI 98


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 1 CNPKVKIP 8
C P +KIP
Sbjct: 369 CEPGLKIP 376


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NPKVKIPV 9
NPK+K+ V
Sbjct: 298 NPKIKVGV 305


>sp|SUCC_IGNH4|SUCCINATE--COA ligase [ADP-forming] subunit beta|Ignicoccus hospitalis (strain

Query: 2 NPKVKI 7
NPKVK+
Sbjct: 298 NPKVKV 303


>sp|SQRD_ACIAM|SULFIDE-QUINONE reductase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 NPKVKIP 8
NPK K+P
Sbjct: 161 NPKPKVP 167


>sp|PORA_METBF|PYRUVATE synthase subunit PorA|Methanosarcina barkeri (strain Fusaro /

Query: 2 NPKVKIPV 9
N KV++PV
Sbjct: 349 NSKVRVPV 356


>sp|LIPA_PICTO|LIPOYL synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 NPKVKIPVG 10
N KVK+P G
Sbjct: 7 NYKVKLPSG 15


>sp|PYRC_SACS2|DIHYDROOROTASE solfataricus (strain ATCC 35092

Query: 1 CNPKVKIPVG 10
C P + +P G
Sbjct: 34 CKPDIALPKG 43


>sp|HIS8_METVS|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 CNPKVK 6
C+PK+K
Sbjct: 49 CSPKIK 54




488|SequenceR|2445|2436|MVRLNCNPKV

>sp|THIE_METMA|THIAMINE-PHOSPHATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MVRLNCNPK 9
M + NCNPK
Sbjct: 1 MEKKNCNPK 9


>sp|EF2_PYRWO|ELONGATION factor 2|Pyrococcus woesei

Query: 4 LNCNPK 9
LNC+PK
Sbjct: 284 LNCDPK 289


>sp|EF2_PYRFU|ELONGATION factor 2|Pyrococcus furiosus (strain ATCC 43587

Query: 4 LNCNPK 9
LNC+PK
Sbjct: 284 LNCDPK 289


>sp|EF2_PYRHO|ELONGATION factor 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 LNCNPK 9
LNC+PK
Sbjct: 284 LNCDPK 289


>sp|ATRMA_PYRHO|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 1 MVRLNCNPK 9
+V ++CNPK
Sbjct: 363 IVYVSCNPK 371


>sp|ATRMA_PYRFU|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus furiosus (strain

Query: 1 MVRLNCNPK 9
+V ++CNPK
Sbjct: 364 IVYVSCNPK 372


>sp|EF2_PYRAB|ELONGATION factor 2|Pyrococcus abyssi (strain GE5 /

Query: 4 LNCNPK 9
LNC+PK
Sbjct: 284 LNCDPK 289


>sp|ARLMC_PYRFU|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus furiosus

Query: 1 MVRLNCNPK 9
+V ++CNPK
Sbjct: 360 VVYVSCNPK 368


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 2 VRLNCNPK 9
+ +NCNP+
Sbjct: 598 IMVNCNPE 605


>sp|NADA_PYRFU|QUINOLINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MVRLNCNPKV 10
MV CNP+V
Sbjct: 198 MVHPECNPEV 207


>sp|KAD6_METJA|PUTATIVE adenylate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MVRLNCNPKV 10
++ L CNP++
Sbjct: 87 IIVLRCNPEI 96


>sp|EF2_THEKO|ELONGATION factor 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 LNCNPK 9
+NC+PK
Sbjct: 284 MNCDPK 289


>sp|EF2_THEON|ELONGATION factor 2|Thermococcus onnurineus (strain NA1)

Query: 4 LNCNPK 9
+NC+PK
Sbjct: 284 INCDPK 289


>sp|WECC_META3|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 6 CNPKV 10
CNPKV
Sbjct: 312 CNPKV 316


>sp|Y144_METJA|UNCHARACTERIZED protein MJ0144|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VRLNCNP 8
+RLNC P
Sbjct: 161 IRLNCIP 167


>sp|ASPD_METKA|L-ASPARTATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 VRLNCNPKV 10
VR+ C+P+V
Sbjct: 200 VRIVCDPEV 208




489|SequenceR|2450|2441|KEPFGMVRLN

>sp|Y1607_METJA|UNCHARACTERIZED glycosyltransferase MJ1607|Methanocaldococcus jannaschii (strain

Query: 2 EPFGMVRL 9
EPFG+V L
Sbjct: 294 EPFGIVAL 301


>sp|OGT_ARCFU|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PFGMVRL 9
P+GMVR+
Sbjct: 76 PYGMVRM 82


>sp|RNFE_METAC|ION-TRANSLOCATING oxidoreductase complex subunit E|Methanosarcina acetivorans (strain

Query: 2 EPFGMVRLN 10
+PFGM +N
Sbjct: 165 DPFGMTLIN 173


>sp|KGSDH_SACS2|2,5-DIOXOPENTANOATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KEPFGMVRL 9
KEP G+V L
Sbjct: 136 KEPLGVVAL 144


>sp|ASD_METKA|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanopyrus kandleri

Query: 2 EPFGMVRL 9
EP GM+R
Sbjct: 171 EPIGMIRF 178


>sp|Y1515_METJA|UNCHARACTERIZED protein MJ1515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KEPFGMVRL 9
K P+G +RL
Sbjct: 194 KPPYGRIRL 202




490|SequenceR|2455|2446|DFIDSKEPFG

>sp|COFC_ARCFU|2-PHOSPHO-L-LACTATE guanylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DFIDSKEPFG 10
D ID+ +PFG
Sbjct: 35 DVIDAAKPFG 44


>sp|GCH1L_PYRHO|GTP cyclohydrolase 1 type 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 IDSKEPFG 10
+++KEPFG
Sbjct: 117 LEAKEPFG 124


>sp|MUTS_HALWD|DNA mismatch repair protein MutS|Haloquadratum walsbyi (strain DSM

Query: 1 DFIDSKEPFG 10
+ DS++P+G
Sbjct: 307 ELFDSRQPYG 316


>sp|PUR7_PYRAE|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DFIDSKEPFG 10
DFID K FG
Sbjct: 167 DFIDVKFEFG 176


>sp|FTTA_PYRHO|TRANSCRIPTION termination factor FttA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DFIDSKEP 8
D IDS EP
Sbjct: 508 DIIDSNEP 515


>sp|FTTA_PYRAB|TRANSCRIPTION termination factor FttA|Pyrococcus abyssi (strain GE5 /

Query: 1 DFIDSKEP 8
D IDS EP
Sbjct: 505 DIIDSNEP 512


>sp|Y602_METJA|UNCHARACTERIZED protein MJ0602|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DFIDSKE 7
DFID KE
Sbjct: 195 DFIDKKE 201


>sp|HFLX_THEKO|GTPASE HflX|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 IDSKEPFG 10
+DS EP+G
Sbjct: 271 LDSSEPWG 278


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 IDSKEP 8
IDSKEP
Sbjct: 551 IDSKEP 556


>sp|TREH1_SULAC|TREHALASE 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DFIDSKEPF 9
DFID K+P
Sbjct: 444 DFIDVKDPI 452


>sp|Y718_ARCFU|UNCHARACTERIZED protein AF_0718|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FIDSKEP 8
+ID+KEP
Sbjct: 29 YIDAKEP 35


>sp|Y2239_ARCFU|UNCHARACTERIZED protein AF_2239|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FIDSKEPF 9
F+ SKEPF
Sbjct: 50 FLFSKEPF 57


>sp|OTC_SULTO|ORNITHINE carbamoyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DFIDSKEPFG 10
DF+ KE FG
Sbjct: 139 DFMTIKEKFG 148


>sp|PUR7_PYRCJ|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 DFIDSKEPFG 10
DF+D K FG
Sbjct: 171 DFVDVKFEFG 180


>sp|GUAAB_ARCFU|GMP synthase [glutamine-hydrolyzing] subunit B|Archaeoglobus fulgidus

Query: 2 FIDSKEPF 9
FID+KE F
Sbjct: 77 FIDAKEEF 84


>sp|DHYS_PYRHO|PROBABLE deoxyhypusine synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DFIDSKEPF 9
DFI S +PF
Sbjct: 108 DFIKSLKPF 116


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DFIDSKEPFG 10
+F+D E FG
Sbjct: 466 EFVDRLESFG 475


>sp|ACDB2_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 3 IDSKEPFG 10
+DS EPFG
Sbjct: 122 MDSFEPFG 129


>sp|ACDB1_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 3 IDSKEPFG 10
+DS EPFG
Sbjct: 122 MDSFEPFG 129


>sp|ACDB1_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 3 IDSKEPFG 10
+DS EPFG
Sbjct: 122 MDSFEPFG 129


>sp|ACDB1_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 3 IDSKEPFG 10
+DS EPFG
Sbjct: 122 MDSFEPFG 129


>sp|ACDB2_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 3 IDSKEPFG 10
+DS EPFG
Sbjct: 123 MDSFEPFG 130


>sp|ACDB2_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 3 IDSKEPFG 10
+DS EPFG
Sbjct: 122 MDSFEPFG 129


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DFIDSKEPFG 10
+F+D E FG
Sbjct: 466 EFVDRLESFG 475




491|SequenceR|2460|2451|QGADVDFIDS

>sp|KTHY_META3|PROBABLE thymidylate kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 QGADVDFIDS 10
QG D+DFI S
Sbjct: 97 QGIDIDFIAS 106


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GADVDFIDS 10
G+DV+F DS
Sbjct: 655 GSDVNFSDS 663


>sp|Y1487_METJA|UNCHARACTERIZED methyltransferase MJ1487|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GADVDFI 8
G DVDFI
Sbjct: 331 GVDVDFI 337


>sp|Y1147_METJA|UNCHARACTERIZED protein MJ1147|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ADVDFIDS 10
DVDFID+
Sbjct: 130 GDVDFIDT 137


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GADVDFIDS 10
G+DV+F DS
Sbjct: 653 GSDVNFSDS 661


>sp|Y198_METJA|UNCHARACTERIZED protein MJ0198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GADVDFIDS 10
D+DFIDS
Sbjct: 62 ATDIDFIDS 70


>sp|DNAG_PICTO|DNA primase DnaG|Picrophilus torridus (strain ATCC 700027

Query: 1 QGADVDFI 8
Q ADVDFI
Sbjct: 234 QVADVDFI 241


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 3 ADVDFIDS 10
+++DF+DS
Sbjct: 428 SNIDFVDS 435


>sp|SYR_AERPE|ARGININE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GADVDFIDS 10
GAD D+I+S
Sbjct: 479 GADRDWIES 487


>sp|AROA_PICTO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Picrophilus torridus (strain ATCC

Query: 2 GADVDFIDS 10
GAD++F DS
Sbjct: 59 GADIEFNDS 67


>sp|MOAC_THEVO|PROBABLE cyclic pyranopterin monophosphate synthase|Thermoplasma volcanium

Query: 1 QGADVDF 7
+G DVDF
Sbjct: 75 EGVDVDF 81


>sp|MOAC_THEAC|PROBABLE cyclic pyranopterin monophosphate synthase|Thermoplasma

Query: 1 QGADVDF 7
+G DVDF
Sbjct: 68 EGVDVDF 74


>sp|Y727_METJA|UNCHARACTERIZED protein MJ0727|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GADVDFI 8
G D+DFI
Sbjct: 12 GKDIDFI 18


>sp|KAE1B_METTH|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 QGADVDFID 9
+G DV FID
Sbjct: 460 RGGDVVFID 468


>sp|IMDH_HALSA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GADVDFID 9
GADV FID
Sbjct: 253 GADVLFID 260


>sp|TRM1_THEGJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus gammatolerans

Query: 2 GADVDFIDS 10
G+ V+F+DS
Sbjct: 142 GSPVEFLDS 150


>sp|SUCC1_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit beta|Archaeoglobus fulgidus (strain

Query: 1 QGADVDFIDS 10
+GA++ F++S
Sbjct: 360 KGAEIHFVES 369


>sp|TRUD_METVS|PROBABLE tRNA pseudouridine synthase D|Methanococcus vannielii (strain

Query: 2 GADVDFID 9
G ++DF+D
Sbjct: 41 GKEIDFLD 48


>sp|DNAG_NANEQ|DNA primase DnaG|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 GADVDFI 8
GAD+D++
Sbjct: 237 GADIDYV 243


>sp|SPEE_AERPE|POLYAMINE aminopropyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 QGADVDFID 9
QGA++ F+D
Sbjct: 271 QGAELRFLD 279




492|SequenceR|2465|2456|ELELNQGADV

>sp|HEM2_METTH|DELTA-AMINOLEVULINIC acid dehydratase|Methanothermobacter thermautotrophicus (strain

Query: 1 ELELNQGADV 10
EL+L +GAD+
Sbjct: 240 ELDLREGADI 249


>sp|HEM2_ARCFU|DELTA-AMINOLEVULINIC acid dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ELELNQGADV 10
EL++ +GAD+
Sbjct: 235 ELDVKEGADI 244


>sp|Y1209_CALMQ|PROTEIN Cmaq_1209|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 ELELNQGA 8
ELELNQ A
Sbjct: 88 ELELNQEA 95


>sp|AROD_ARCFU|3-DEHYDROQUINATE dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ELELNQGADV 10
ELEL + ADV
Sbjct: 12 ELELAEKADV 21




493|SequenceR|2470|2461|VMSAYELELN

>sp|SYG_METMP|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 MSAYELELN 10
+ AYE+ELN
Sbjct: 362 IEAYEIELN 370


>sp|SYG_METM6|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 MSAYELELN 10
+ AYE+ELN
Sbjct: 362 IEAYEIELN 370


>sp|TRPD_SACS2|ANTHRANILATE phosphoribosyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 3 SAYELELN 10
SAYEL+ N
Sbjct: 204 SAYELDFN 211


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 4 AYELELN 10
AYE+ELN
Sbjct: 933 AYEVELN 939


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 MSAYELEL 9
+S+YE+EL
Sbjct: 5 LSSYEMEL 12


>sp|TRPD_SACI7|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 3 SAYELELN 10
SAYEL+ N
Sbjct: 204 SAYELDFN 211


>sp|TRPD_SACI2|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 3 SAYELELN 10
SAYEL+ N
Sbjct: 204 SAYELDFN 211


>sp|TRPD_SACI6|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 SAYELELN 10
SAYEL+ N
Sbjct: 204 SAYELDFN 211


>sp|TRPD_SACI4|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain M.14.25

Query: 3 SAYELELN 10
SAYEL+ N
Sbjct: 204 SAYELDFN 211


>sp|TRPD_SACI3|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 3 SAYELELN 10
SAYEL+ N
Sbjct: 204 SAYELDFN 211


>sp|TRPD_SACI1|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 3 SAYELELN 10
SAYEL+ N
Sbjct: 204 SAYELDFN 211




494|SequenceR|2475|2466|GQSSPVMSAY

>sp|CDC6M_HALMA|ORC1-TYPE DNA replication protein 13|Haloarcula marismortui (strain ATCC

Query: 1 GQSSPVMSAY 10
G SP+++AY
Sbjct: 99 GTDSPIVTAY 108


>sp|PGK_THESM|PHOSPHOGLYCERATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 GQSSPVMSA 9
GQS PV+ A
Sbjct: 389 GQSLPVLQA 397


>sp|PROF_THOAA|THOR profilin|Thorarchaeota archaeon (strain AB_25)

Query: 3 SSPVMSAY 10
S PVM AY
Sbjct: 2 SDPVMDAY 9




495|SequenceR|2480|2471|LISLNGQSSP

>sp|Y2028_ARCFU|UNCHARACTERIZED protein AF_2028|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LISLNGQSSP 10
++S+N Q+SP
Sbjct: 562 ILSMNEQTSP 571




496|SequenceR|2485|2476|SEQRSLISLN

***** No hits found ******


497|SequenceR|2490|2481|LTFFSSEQRS

>sp|GATE_CALMQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Caldivirga maquilingensis (strain ATCC

Query: 3 FFSSEQRS 10
F SSEQ+S
Sbjct: 618 FLSSEQKS 625




498|SequenceR|2495|2486|HPVITLTFFS

>sp|ADEC_ARCFU|ADENINE deaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PVITLTFFS 10
PVITL+F +
Sbjct: 520 PVITLSFIA 528


>sp|PYRG_SULTO|CTP synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HPVITL 6
HPVITL
Sbjct: 413 HPVITL 418


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 HPVITLTFF 9
HP+I FF
Sbjct: 100 HPIIVKEFF 108


>sp|CDPAS_HYPBU|CDP-ARCHAEOL synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 HPVITLTF 8
HP + LTF
Sbjct: 136 HPAVALTF 143


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HPVITL 6
HPV+TL
Sbjct: 169 HPVLTL 174




499|SequenceR|2500|2491|VETYGHPVIT

>sp|HCP_METJA|HYDROXYLAMINE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ETYGHPVIT 10
ETYGHP IT
Sbjct: 210 ETYGHPEIT 218


>sp|HCP_METAR|HYDROXYLAMINE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 3 TYGHPVIT 10
TYGHP IT
Sbjct: 220 TYGHPTIT 227


>sp|SYT_THEPD|THREONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 VETYGHPV 8
VE YGHP+
Sbjct: 123 VECYGHPL 130


>sp|AOR_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus furiosus (strain ATCC

Query: 2 ETYGHPVIT 10
E+YGHP ++
Sbjct: 408 ESYGHPELS 416


>sp|HCP_METVS|HYDROXYLAMINE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 2 ETYGHPVIT 10
E+YG+P IT
Sbjct: 214 ESYGNPEIT 222


>sp|QOX1_SULAC|QUINOL oxidase subunit 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 YGHPVI 9
YGHPV+
Sbjct: 233 YGHPVV 238


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 1 VETYGHPVIT 10
ET+G PVI+
Sbjct: 501 AETFGTPVIS 510


>sp|EF2_SULAC|ELONGATION factor 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VETYGHP 7
+ETYG P
Sbjct: 178 IETYGEP 184


>sp|AOR_THEKO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Thermococcus kodakarensis

Query: 2 ETYGHP 7
E YGHP
Sbjct: 408 EMYGHP 413


>sp|Y1086_METJA|UNCHARACTERIZED protein MJ1086|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VETYGHP 7
V TY HP
Sbjct: 19 VNTYAHP 25


>sp|Y948_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB09480|Pyrococcus abyssi (strain GE5 /

Query: 2 ETYGHPVIT 10
ET+G PV T
Sbjct: 96 ETFGFPVPT 104


>sp|CH60_METVS|CHAPERONIN GroEL|Methanococcus vannielii (strain ATCC 35089

Query: 2 ETYGHPVIT 10
++YG P+IT
Sbjct: 41 KSYGSPLIT 49


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 1 VETYGHP 7
+ET GHP
Sbjct: 743 LETVGHP 749


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 1 VETYGHP 7
+ET GHP
Sbjct: 743 LETVGHP 749


>sp|SYTE_SACS2|THREONINE--TRNA ligase editing subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 VETYGHPV 8
+ YGHP+
Sbjct: 119 ISCYGHPL 126


>sp|DHYS_IGNH4|PROBABLE deoxyhypusine synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VETYGHPV 8
VE YG PV
Sbjct: 132 VENYGPPV 139


>sp|RL15E_SULAC|LARGE ribosomal subunit protein eL15|Sulfolobus acidocaldarius (strain

Query: 4 YGHPVI 9
Y HPVI
Sbjct: 135 YSHPVI 140


>sp|MCH_METMP|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 2 ETYGHPVI 9
ETYG P +
Sbjct: 263 ETYGKPFL 270


>sp|DYR2_HALMA|DIHYDROFOLATE reductase 2|Haloarcula marismortui (strain ATCC 43049

Query: 3 TYGHPVI 9
T GHPVI
Sbjct: 38 TVGHPVI 44


>sp|MCH_METM5|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C5 /

Query: 2 ETYGHPVI 9
ETYG P +
Sbjct: 263 ETYGKPFL 270


>sp|MCH_METM7|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C7 /

Query: 2 ETYGHPVI 9
ETYG P +
Sbjct: 263 ETYGKPFL 270


>sp|SURE_THEPD|5'-NUCLEOTIDASE SurE|Thermofilum pendens (strain DSM 2475

Query: 4 YGHPV 8
YGHPV
Sbjct: 208 YGHPV 212


>sp|DYRB_HALVO|DIHYDROFOLATE reductase HdrB|Haloferax volcanii (Halobacterium volcanii)

Query: 3 TYGHPVI 9
T GHPV+
Sbjct: 52 TTGHPVV 58


>sp|SURE_METST|5'-NUCLEOTIDASE SurE|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VETYGHP 7
++ YGHP
Sbjct: 203 IDPYGHP 209


>sp|FPOC_METMA|F(420)H(2) dehydrogenase subunit C|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VETYGHPVI 9
+ +Y HPV+
Sbjct: 74 IASYDHPVV 82


>sp|SYT_STAMF|THREONINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 VETYGHPV 8
++ YGHP+
Sbjct: 123 LDCYGHPL 130


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 ETYGHPVI 9
E Y HPVI
Sbjct: 262 EAYYHPVI 269


>sp|HCP_METTH|HYDROXYLAMINE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VETYGHP 7
++TYG P
Sbjct: 103 IDTYGEP 109


>sp|AATI_AERPE|A-TYPE ATP synthase subunit I|Aeropyrum pernix (strain ATCC 700893

Query: 1 VETYGHP 7
VE YG+P
Sbjct: 338 VELYGYP 344


>sp|Y332_METJA|UNCHARACTERIZED protein MJ0332|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ETYGHPVI 9
E YGH ++
Sbjct: 86 EAYGHQIL 93


>sp|PUR2_PYRHO|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VETYGHPVI 9
++ YG PV+
Sbjct: 135 IDEYGKPVV 143


>sp|GLCDH_METS5|GLUCOSE 1-dehydrogenase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VETYGHP 7
V+T GHP
Sbjct: 243 VDTSGHP 249


>sp|PUR2_PYRAB|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 VETYGHPVI 9
++ YG PV+
Sbjct: 135 IDEYGKPVV 143


>sp|G3P_METKA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 VETYGHPV 8
VE YG+P+
Sbjct: 46 VEEYGYPL 53


>sp|SYFB_NATPD|PHENYLALANINE--TRNA ligase beta subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ETYGHPV 8
ETYGH V
Sbjct: 196 ETYGHLV 202




500|SequenceR|2505|2496|VPINAVETYG

>sp|Y51A_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ0514.1|Methanocaldococcus jannaschii

Query: 2 PINAVETYG 10
P NA+E YG
Sbjct: 127 PFNAIEEYG 135


>sp|ATGT_SULTO|TRNA-GUANINE(15) transglycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VPINAVETY 9
+PIN +E Y
Sbjct: 428 IPINLIEVY 436


>sp|THIC2_METST|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VPINAVET 8
+PIN +ET
Sbjct: 269 IPINEIET 276


>sp|THIC_META3|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VPINAVET 8
VP+N VET
Sbjct: 269 VPLNNVET 276


>sp|G3P_THEAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PINAVE 7
PINAVE
Sbjct: 178 PINAVE 183


>sp|AMTAB_ARCFU|PROBABLE threonylcarbamoyladenosine tRNA

Query: 5 AVETYG 10
A+ETYG
Sbjct: 4 AIETYG 9


>sp|GGR_METPE|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 VPINAVET 8
VP+N +ET
Sbjct: 172 VPVNEIET 179


>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 1 VPINAVETY 9
+P +A++TY
Sbjct: 67 IPYHAIDTY 75


>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 1 VPINAVETY 9
+P +A++TY
Sbjct: 67 IPYHAIDTY 75


>sp|G3P_THEVO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PINAVE 7
PINAVE
Sbjct: 178 PINAVE 183


>sp|ENO_AERPE|ENOLASE pernix (strain ATCC 700893

Query: 5 AVETYG 10
AVETYG
Sbjct: 185 AVETYG 190


>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain

Query: 1 VPINAVETY 9
+P +A++TY
Sbjct: 67 IPYHAIDTY 75


>sp|THIC_METJA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VPINAVET 8
+PIN +ET
Sbjct: 269 IPINYIET 276




501|SequenceR|2510|2501|RGPRAVPINA

>sp|DHOM_SULTO|HOMOSERINE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RGPRAVPINA 10
RGP A P+NA
Sbjct: 279 RGPGAGPVNA 288


>sp|TRPF_AERPE|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GPRAVPINA 10
GPR+VP+ A
Sbjct: 34 GPRSVPLEA 42


>sp|NITR_PYRAB|NITRILASE abyssi (strain GE5 /

Query: 2 GPRAVPINA 10
PRA+PI A
Sbjct: 177 APRAMPIRA 185


>sp|THII_SACI7|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 RGPRAVPI 8
+GPR +P+
Sbjct: 160 KGPRGLPV 167


>sp|THII_SACI1|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 RGPRAVPI 8
+GPR +P+
Sbjct: 160 KGPRGLPV 167


>sp|THII_SACI2|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 RGPRAVPI 8
+GPR +P+
Sbjct: 160 KGPRGLPV 167


>sp|IORB_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorB|Archaeoglobus fulgidus (strain ATCC

Query: 3 PRAVPINA 10
PR +P+NA
Sbjct: 125 PRVIPVNA 132


>sp|SPEH_SACS2|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Saccharolobus solfataricus (strain ATCC

Query: 2 GPRAVPINA 10
GP P+NA
Sbjct: 92 GPHTSPLNA 100


>sp|HELS_METTH|ATP-DEPENDENT DNA helicase Hel308|Methanothermobacter thermautotrophicus (strain

Query: 1 RGPRAVPI 8
+GPR +P+
Sbjct: 348 QGPRRIPV 355


>sp|SYK_AERPE|LYSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GPRAVPI 8
GPRA P+
Sbjct: 513 GPRAAPL 519


>sp|RS6E_PYRAR|SMALL ribosomal subunit protein eS6|Pyrobaculum arsenaticum (strain DSM

Query: 2 GPRAVPINA 10
GP A+PI A
Sbjct: 125 GPPAIPIGA 133




502|SequenceR|2515|2506|VNYLRRGPRA

>sp|GFCR_METLZ|TRANSCRIPTIONAL regulator GfcR|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 VNYLRR 6
VNYLRR
Sbjct: 158 VNYLRR 163


>sp|GATD_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina acetivorans (strain ATCC

Query: 1 VNYLRRGPRA 10
++Y RRG +A
Sbjct: 278 IDYTRRGEKA 287


>sp|COOS1_METMA|CARBON monoxide dehydrogenase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VNYLRRGPRA 10
+ Y RR P A
Sbjct: 166 IQYTRRAPEA 175


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 NYLRRGPR 9
NY R GPR
Sbjct: 813 NYKRIGPR 820


>sp|SYFB_METJA|PHENYLALANINE--TRNA ligase beta subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VNYLRR 6
+NYLRR
Sbjct: 301 INYLRR 306


>sp|ASOR_PYRFU|ALIPHATIC sulfonate oxidoreductase, WOR-like subunit|Pyrococcus furiosus

Query: 1 VNYLRRGP 8
++YLR GP
Sbjct: 309 ISYLRYGP 316


>sp|GATD_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina barkeri (strain Fusaro /

Query: 1 VNYLRRGPR 9
++Y++RG R
Sbjct: 278 IDYIKRGER 286


>sp|Y286_METMP|UPF0248 protein MMP0286|Methanococcus maripaludis (strain DSM 14266

Query: 1 VNYLRRG 7
+NYL RG
Sbjct: 22 INYLHRG 28


>sp|SYH_PYRIL|HISTIDINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 NYLRRGPR 9
+YLRR PR
Sbjct: 6 DYLRRPPR 13


>sp|NDK_THEVO|NUCLEOSIDE diphosphate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VNYLRRGP 8
VNY+ GP
Sbjct: 62 VNYITSGP 69


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VNYLRRGPR 9
+NYLRR R
Sbjct: 1288 MNYLRRDER 1296


>sp|ACYP_METS5|ACYLPHOSPHATASE sedula (strain ATCC 51363

Query: 1 VNYLRRGP 8
+NYL +GP
Sbjct: 59 LNYLWKGP 66


>sp|IF2B_NANEQ|TRANSLATION initiation factor 2 subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 NYLRRGPR 9
NYL R P+
Sbjct: 51 NYLNRDPK 58




503|SequenceR|2520|2511|ANPNRVNYLR

>sp|SYFB_METJA|PHENYLALANINE--TRNA ligase beta subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 NPNRVNYL 9
NPNR +YL
Sbjct: 52 NPNRPDYL 59


>sp|SYM_METAR|METHIONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 ANPNRVNY 8
A PN VNY
Sbjct: 219 ATPNAVNY 226


>sp|GLMS_HALSA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Halobacterium salinarum (strain ATCC

Query: 4 NRVNYLR 10
NRV YLR
Sbjct: 198 NRVTYLR 204


>sp|PYRF_THEKO|OROTIDINE 5'-phosphate decarboxylase|Thermococcus kodakarensis (strain ATCC

Query: 3 PNRVNYLR 10
P RV+Y+R
Sbjct: 147 PERVSYIR 154


>sp|RS8E_HALWD|SMALL ribosomal subunit protein eS8|Haloquadratum walsbyi (strain DSM

Query: 2 NPNRVNYLR 10
NP VNY+R
Sbjct: 80 NPANVNYIR 88


>sp|MTIP_METAC|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanosarcina acetivorans

Query: 3 PNRVNY 8
P+RVNY
Sbjct: 62 PHRVNY 67


>sp|RL29_ARCFU|LARGE ribosomal subunit protein uL29|Archaeoglobus fulgidus (strain

Query: 2 NPNRVNYLR 10
NP R+N +R
Sbjct: 43 NPGRINLIR 51


>sp|SRP54_THEGJ|SIGNAL recognition particle 54 kDa|Thermococcus gammatolerans (strain DSM

Query: 2 NPNRVNYLR 10
NP+ +NY R
Sbjct: 389 NPDIINYSR 397


>sp|SRP54_PYRAB|SIGNAL recognition particle 54 kDa|Pyrococcus abyssi (strain GE5 /

Query: 2 NPNRVNYLR 10
NP+ +NY R
Sbjct: 389 NPDIINYSR 397


>sp|PYLS_METAC|PYRROLYSINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PNRVNYLR 10
PN NYLR
Sbjct: 292 PNLYNYLR 299


>sp|NPD_SULAC|NAD-DEPENDENT protein deacetylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ANPNRVNY 8
A PNR +Y
Sbjct: 78 AKPNRAHY 85


>sp|PYLS_METMA|PYRROLYSINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PNRVNYLR 10
PN NYLR
Sbjct: 303 PNLYNYLR 310


>sp|Y3512_METJA|UNCHARACTERIZED protein MJECL12|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NPNRVNYL 9
N N+VN+L
Sbjct: 221 NKNKVNFL 228


>sp|PYRF_PYRAB|OROTIDINE 5'-phosphate decarboxylase|Pyrococcus abyssi (strain GE5 /

Query: 3 PNRVNYLR 10
P RV Y+R
Sbjct: 143 PERVKYIR 150


>sp|Y1057_METJA|UNCHARACTERIZED glycosyltransferase MJ1057|Methanocaldococcus jannaschii (strain

Query: 3 PNRVNYL 9
PNR NYL
Sbjct: 214 PNRDNYL 220


>sp|PYLS_METTE|PYRROLYSINE--TRNA ligase|Methanosarcina thermophila

Query: 3 PNRVNYLR 10
PN NYLR
Sbjct: 327 PNLYNYLR 334


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 NPNRVNYL 9
NPN V+Y+
Sbjct: 237 NPNVVHYI 244




504|SequenceR|2525|2516|SDSHSANPNR

>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SDSHSANPNR 10
SD+HS +P+R
Sbjct: 572 SDAHSYHPHR 581


>sp|CHEB1_METAC|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina

Query: 4 HSANPN 9
HS+NPN
Sbjct: 126 HSSNPN 131


>sp|AROD_METHJ|3-DEHYDROQUINATE dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SDSHSANPNR 10
SD+ A+PNR
Sbjct: 3 SDALKADPNR 12


>sp|FBPAP_THEON|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus onnurineus (strain NA1)

Query: 4 HSANPNR 10
H ANP R
Sbjct: 287 HQANPTR 293


>sp|FBPAP_THEKO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 HSANPNR 10
H ANP R
Sbjct: 287 HQANPTR 293


>sp|LYSK_AERPE|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Aeropyrum pernix (strain

Query: 2 DSHSANPNR 10
+ HS+NP R
Sbjct: 177 EGHSSNPER 185


>sp|RS8E_METPE|SMALL ribosomal subunit protein eS8|Methanosphaerula palustris (strain

Query: 2 DSHSANPN 9
+ +SANPN
Sbjct: 80 EENSANPN 87




505|SequenceR|2530|2521|IQVLVSDSHS

>sp|FWDB_METJA|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanocaldococcus

Query: 1 IQVLVSDSH 9
+++LV D+H
Sbjct: 20 LEILVEDNH 28


>sp|SYY_PYRAR|TYROSINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 QVLVSDSHS 10
Q+L++D HS
Sbjct: 69 QILLADIHS 77


>sp|SYY1_PYRAE|TYROSINE--TRNA ligase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 QVLVSDSHS 10
Q+L++D HS
Sbjct: 69 QILLADIHS 77




506|SequenceR|2535|2526|GETADIQVLV

>sp|URE1_NATPD|UREASE subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ETADIQVLV 10
E+ADIQV +
Sbjct: 239 ESADIQVCI 247


>sp|Y435_METJA|PUTATIVE protein adenylyltransferase MJ0435|Methanocaldococcus jannaschii

Query: 2 ETADIQVLV 10
ET+DI +LV
Sbjct: 35 ETSDIDILV 43




507|SequenceR|2540|2531|TIVKNGETAD

>sp|GLMS_HALSA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Halobacterium salinarum (strain ATCC

Query: 2 IVKNGETAD 10
I ++GETAD
Sbjct: 342 ITQSGETAD 350


>sp|GLMS_METMA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina mazei (strain ATCC

Query: 2 IVKNGETAD 10
I ++GETAD
Sbjct: 356 ITQSGETAD 364


>sp|GLMS_THEKO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Thermococcus kodakarensis (strain

Query: 2 IVKNGETAD 10
I ++GETAD
Sbjct: 342 ITQSGETAD 350


>sp|GLMS_METAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina acetivorans (strain

Query: 2 IVKNGETAD 10
I ++GETAD
Sbjct: 356 ITQSGETAD 364


>sp|GLMS_PYRHO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus horikoshii (strain ATCC

Query: 2 IVKNGETAD 10
I ++GETAD
Sbjct: 342 ITQSGETAD 350


>sp|GLMS_PYRAB|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus abyssi (strain GE5 /

Query: 2 IVKNGETAD 10
I ++GETAD
Sbjct: 342 ITQSGETAD 350


>sp|GLMS_PYRFU|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus furiosus (strain ATCC

Query: 2 IVKNGETAD 10
I ++GETAD
Sbjct: 342 ITQSGETAD 350


>sp|Y1111_HALSA|UNCHARACTERIZED GTP-binding protein VNG_1111G|Halobacterium salinarum (strain ATCC

Query: 2 IVKNGETAD 10
I++ GET D
Sbjct: 313 IIRRGETVD 321


>sp|GLMS_METKA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanopyrus kandleri (strain AV19 /

Query: 2 IVKNGETAD 10
I ++GETAD
Sbjct: 350 ISQSGETAD 358


>sp|CSG_METJA|S-LAYER protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IVKNGETAD 10
I+K GET D
Sbjct: 265 IIKEGETYD 273


>sp|GLNB2_METTH|NITROGEN regulatory protein P-II 2|Methanothermobacter thermautotrophicus

Query: 1 TIVKNGETAD 10
TIVK+ +T D
Sbjct: 79 TIVKSAQTGD 88


>sp|DHQS_METKA|3-DEHYDROQUINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 TIVKNGET 8
TIV+N ET
Sbjct: 348 TIVQNAET 355




508|SequenceR|2545|2536|LPSRLTIVKN

>sp|HELS_THEVO|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LPSRLTIVKN 10
LP+RL IVK+
Sbjct: 327 LPARLVIVKD 336


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LPSRLTIVKN 10
+P+R T VKN
Sbjct: 1295 IPTRFTPVKN 1304


>sp|RPO2C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 1 LPSRLTI 7
LPSR+T+
Sbjct: 404 LPSRMTV 410


>sp|RPO2C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 1 LPSRLTI 7
LPSR+T+
Sbjct: 404 LPSRMTV 410


>sp|RL24_NANEQ|LARGE ribosomal subunit protein uL24|Nanoarchaeum equitans (strain

Query: 2 PSRLTIVK 9
PS+LTI+K
Sbjct: 104 PSKLTIIK 111


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 LPSRLTI 7
LPSR+TI
Sbjct: 913 LPSRMTI 919


>sp|HELS_METBF|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina barkeri (strain Fusaro /

Query: 1 LPSRLTIVKN 10
LP+R I++N
Sbjct: 345 LPARRVIIRN 354


>sp|Y1008_CALMQ|UPF0179 protein Cmaq_1008|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 LPSRLTIVK 9
LPSR+ I+K
Sbjct: 112 LPSRVKIIK 120




509|SequenceR|2550|2541|HNKIQLPSRL

>sp|PYRI_THEAC|ASPARTATE carbamoyltransferase regulatory chain|Thermoplasma acidophilum

Query: 3 KIQLPSRL 10
+++LPSRL
Sbjct: 95 QVELPSRL 102




510|SequenceR|2555|2546|FAISFHNKIQ

>sp|UVRC_METST|UVRABC system protein C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 FAISFHNKIQ 10
FAI+FH K++
Sbjct: 524 FAITFHRKLR 533


>sp|DAPAL_PYRAR|UNCHARACTERIZED DapA-like lyase Pars_0992|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 AISFHNKI 9
A+S HNK+
Sbjct: 230 AVSLHNKL 237


>sp|UVRC_HALLT|UVRABC system protein C|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 FAISFHNKIQ 10
FA+S+H ++
Sbjct: 526 FAVSYHQTVR 535


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 ISFHNKI 9
+ FHNKI
Sbjct: 508 MDFHNKI 514




511|SequenceR|2560|2551|FKYIIFAISF

>sp|SYY_SULTO|TYROSINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KYIIFA 7
KYIIFA
Sbjct: 281 KYIIFA 286


>sp|AATB_SULTO|A-TYPE ATP synthase subunit B|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KYIIFAISF 10
KY++FA +F
Sbjct: 404 KYLLFAEAF 412




512|SequenceR|2565|2556|KVNKVFKYII

>sp|CBIM2_METPE|PUTATIVE cobalt transport protein CbiM|Methanosphaerula palustris (strain

Query: 5 VFKYII 10
VFKYII
Sbjct: 200 VFKYII 205


>sp|Y823_METJA|UNCHARACTERIZED ATP-binding protein MJ0823|Methanocaldococcus jannaschii (strain

Query: 1 KVNKVFKYII 10
++ K+F YII
Sbjct: 242 EIEKIFNYII 251


>sp|Y629_METJA|UPF0111 protein MJ0629|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NKVFKYII 10
N+++KY+I
Sbjct: 165 NRIYKYLI 172


>sp|K6PF_THEZI|ADP-SPECIFIC phosphofructokinase|Thermococcus zilligii

Query: 1 KVNKVFKY 8
KVN++F++
Sbjct: 166 KVNRIFEF 173




513|SequenceR|2570|2561|IRELLKVNKV

>sp|Y1344_THEON|UPF0200 protein TON_1344|Thermococcus onnurineus (strain NA1)

Query: 1 IRELLKVNKV 10
+RELL+ NKV
Sbjct: 74 VRELLRKNKV 83


>sp|RAD50_SULAC|DNA double-strand break repair Rad50|Sulfolobus acidocaldarius (strain

Query: 1 IRELLKVNKV 10
++ELLK+NK+
Sbjct: 151 MKELLKINKL 160


>sp|PCNA_METS3|DNA polymerase sliding clamp|Methanobrevibacter smithii (strain ATCC

Query: 1 IRELLKVNK 9
IRE+LK +K
Sbjct: 196 IREMLKADK 204


>sp|COFD_METMA|2-PHOSPHO-L-LACTATE transferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IRELLKVNKV 10
+RELLK KV
Sbjct: 207 MRELLKKKKV 216


>sp|FDHB_METJA|F420-DEPENDENT formate dehydrogenase subunit beta|Methanocaldococcus jannaschii

Query: 1 IRELLKVNKV 10
IREL K+N++
Sbjct: 101 IRELAKLNQI 110


>sp|COFD_METAC|2-PHOSPHO-L-LACTATE transferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IRELLKVNKV 10
+RELLK KV
Sbjct: 207 MRELLKRKKV 216


>sp|GGR_METB6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoregula boonei (strain DSM 21154

Query: 1 IRELLKVN 8
I+ELLK N
Sbjct: 376 IKELLKAN 383


>sp|GFCR_METST|TRANSCRIPTIONAL regulator GfcR|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 IRELLKVNKV 10
I+ L+K+NKV
Sbjct: 188 IKSLIKINKV 197


>sp|CSX1_SACS2|CRISPR system endoribonuclease Csx1|Saccharolobus solfataricus (strain

Query: 1 IRELLKVNK 9
+R+LLKV+K
Sbjct: 36 LRDLLKVDK 44


>sp|CCA_THEKO|CCA-ADDING enzyme|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IRELLKVNKV 10
+RELL+ N+V
Sbjct: 406 VRELLEKNQV 415


>sp|SRP54_METAR|SIGNAL recognition particle 54 kDa|Methanocella arvoryzae (strain DSM

Query: 1 IRELLKVNKV 10
+RELLK +K+
Sbjct: 406 VRELLKYHKM 415




514|SequenceR|2575|2566|PRAIGIRELL

>sp|DNLI_METVS|DNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PRAIGIRE 8
PR +GIRE
Sbjct: 542 PRVVGIRE 549


>sp|PCKG_SULAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PRAIGIRELL 10
PR G+RE+L
Sbjct: 107 PRDEGLREML 116


>sp|KHSE_METJA|HOMOSERINE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PRAIGIRELL 10
P+A+G+++L+
Sbjct: 187 PKAVGLKDLV 196


>sp|DNLI2_HALWD|DNA ligase 2|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PRAIGIR 7
PR +GIR
Sbjct: 588 PRVVGIR 594


>sp|UVRB_METMA|UVRABC system protein B|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RAIGIRELL 10
RAI +REL+
Sbjct: 652 RAIQVRELI 660


>sp|UPPS_AERPE|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Aeropyrum pernix

Query: 1 PRAIGI 6
PRAIGI
Sbjct: 4 PRAIGI 9


>sp|PMDHL_AERPE|PHOSPHOMEVALONATE dehydratase large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 PRAIGIRE 8
PR +G+RE
Sbjct: 130 PRRVGLRE 137


>sp|HIS6_ARCFU|IMIDAZOLE glycerol phosphate synthase subunit|Archaeoglobus fulgidus (strain

Query: 2 RAIGIREL 9
R IGIRE+
Sbjct: 251 REIGIREI 258


>sp|RL1_METLZ|LARGE ribosomal subunit protein uL1|Methanocorpusculum labreanum

Query: 1 PRAIGIREL 9
P+AIG++++
Sbjct: 52 PQAIGVKKI 60




515|SequenceR|2580|2571|HFEEEPRAIG

>sp|FWDF_METJA|POLYFERREDOXIN protein FwdF|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HFEEEPRAIG 10
+FE EP+AI
Sbjct: 336 NFEREPKAIA 345


>sp|NUSA_THECE|PROBABLE transcription termination protein NusA|Thermococcus celer

Query: 4 EEPRAIG 10
E+PRAIG
Sbjct: 114 EKPRAIG 120


>sp|MTRA_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanococcus maripaludis (strain DSM

Query: 2 FEEEPRAI 9
FEEEP I
Sbjct: 160 FEEEPMVI 167


>sp|GCSPA_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 FEEEPRAIG 10
EEE RAIG
Sbjct: 217 LEEEIRAIG 225


>sp|CSD_METTH|PROBABLE cysteine desulfurase|Methanothermobacter thermautotrophicus (strain

Query: 1 HFEEEPRAIG 10
H E + RAIG
Sbjct: 197 HMEVDVRAIG 206


>sp|THIC_ARCFU|PHOSPHOMETHYLPYRIMIDINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EEEPRAIG 10
E +PRAIG
Sbjct: 49 EVQPRAIG 56


>sp|SRP54_NATPD|SIGNAL recognition particle 54 kDa|Natronomonas pharaonis (strain ATCC

Query: 4 EEPRAIG 10
E PRAIG
Sbjct: 388 ENPRAIG 394


>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 HFEEEPRAI 9
H EE+P+A+
Sbjct: 274 HHEEQPQAL 282


>sp|PGK_PYRAE|PHOSPHOGLYCERATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 FEEEPRAIG 10
FE E RA+G
Sbjct: 183 FERELRALG 191


>sp|MCRA_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 FEEEPR 7
FEE+PR
Sbjct: 16 FEEDPR 21




516|SequenceR|2585|2576|SDLPVHFEEE

>sp|RL18_SULTO|LARGE ribosomal subunit protein uL18|Sulfurisphaera tokodaii (strain DSM

Query: 2 DLPVHFEE 9
DLP HFEE
Sbjct: 179 DLPSHFEE 186


>sp|RL18_DESA1|LARGE ribosomal subunit protein uL18|Desulfurococcus amylolyticus (strain

Query: 2 DLPVHFEE 9
DLP HFEE
Sbjct: 178 DLPSHFEE 185


>sp|RL18_METAR|LARGE ribosomal subunit protein uL18|Methanocella arvoryzae (strain DSM

Query: 1 SDLPVHFEE 9
+DLP HF+E
Sbjct: 168 ADLPAHFDE 176


>sp|RL18_PYRNV|LARGE ribosomal subunit protein uL18|Pyrobaculum neutrophilum (strain DSM

Query: 2 DLPVHFEE 9
DLP HFEE
Sbjct: 179 DLPKHFEE 186


>sp|RL18_METS5|LARGE ribosomal subunit protein uL18|Metallosphaera sedula (strain ATCC

Query: 2 DLPVHFEE 9
DLP HF+E
Sbjct: 178 DLPAHFKE 185


>sp|RL18_PYRIL|LARGE ribosomal subunit protein uL18|Pyrobaculum islandicum (strain DSM

Query: 2 DLPVHFEE 9
+LP HFEE
Sbjct: 179 ELPTHFEE 186


>sp|RL18_METVA|LARGE ribosomal subunit protein uL18|Methanococcus vannielii

Query: 2 DLPVHFEE 9
DLP HFEE
Sbjct: 180 DLPEHFEE 187


>sp|RL18_STAMF|LARGE ribosomal subunit protein uL18|Staphylothermus marinus (strain ATCC

Query: 1 SDLPVHFEE 9
+ LP HFEE
Sbjct: 179 TQLPTHFEE 187


>sp|RL18_HYPBU|LARGE ribosomal subunit protein uL18|Hyperthermus butylicus (strain DSM

Query: 2 DLPVHFEE 9
DLP HFEE
Sbjct: 180 DLPQHFEE 187


>sp|RL18_METVS|LARGE ribosomal subunit protein uL18|Methanococcus vannielii (strain ATCC

Query: 2 DLPVHFEE 9
DLP HFEE
Sbjct: 178 DLPEHFEE 185


>sp|RL18_SACS2|LARGE ribosomal subunit protein uL18|Saccharolobus solfataricus (strain

Query: 2 DLPVHFEE 9
+LP HFEE
Sbjct: 182 NLPSHFEE 189


>sp|RL18_SACI7|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 2 DLPVHFEE 9
+LP HFEE
Sbjct: 179 NLPSHFEE 186


>sp|RL18_SACI6|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 2 DLPVHFEE 9
+LP HFEE
Sbjct: 179 NLPSHFEE 186


>sp|RL18_SACI4|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 2 DLPVHFEE 9
+LP HFEE
Sbjct: 179 NLPSHFEE 186


>sp|RL18_SACI3|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 2 DLPVHFEE 9
+LP HFEE
Sbjct: 179 NLPSHFEE 186


>sp|RL18_SACI2|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 2 DLPVHFEE 9
+LP HFEE
Sbjct: 179 NLPSHFEE 186


>sp|RL18_SACI1|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 2 DLPVHFEE 9
+LP HFEE
Sbjct: 179 NLPSHFEE 186


>sp|RL4_METJA|LARGE ribosomal subunit protein uL4|Methanocaldococcus jannaschii

Query: 2 DLPVHFEEE 10
DLP FEEE
Sbjct: 17 DLPAVFEEE 25


>sp|RL18_META3|LARGE ribosomal subunit protein uL18|Methanococcus aeolicus (strain ATCC

Query: 2 DLPVHFEE 9
DLP HFEE
Sbjct: 179 DLPEHFEE 186


>sp|RL18_ARCFU|LARGE ribosomal subunit protein uL18|Archaeoglobus fulgidus (strain ATCC

Query: 1 SDLPVHFEE 9
SDLP H +E
Sbjct: 172 SDLPAHVDE 180


>sp|RL18_SULAC|LARGE ribosomal subunit protein uL18|Sulfolobus acidocaldarius (strain

Query: 3 LPVHFEE 9
LP HFEE
Sbjct: 180 LPQHFEE 186


>sp|RL18_METTH|LARGE ribosomal subunit protein uL18|Methanothermobacter

Query: 2 DLPVHFEE 9
DLP HF+E
Sbjct: 176 DLPEHFDE 183


>sp|RL18_PYRCJ|LARGE ribosomal subunit protein uL18|Pyrobaculum calidifontis (strain DSM

Query: 2 DLPVHFEE 9
+LP HFEE
Sbjct: 179 ELPSHFEE 186


>sp|RL18_METS3|LARGE ribosomal subunit protein uL18|Methanobrevibacter smithii (strain

Query: 1 SDLPVHFEE 9
+DLP +FEE
Sbjct: 175 ADLPKNFEE 183


>sp|MTAD_HALSA|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Halobacterium salinarum (strain ATCC 700922

Query: 1 SDLPVHF 7
+D+PVHF
Sbjct: 203 ADVPVHF 209


>sp|RL18_HALMA|LARGE ribosomal subunit protein uL18|Haloarcula marismortui (strain ATCC

Query: 1 SDLPVHFEE 9
+DLP HF+E
Sbjct: 167 ADLPEHFDE 175


>sp|RL18_NANEQ|LARGE ribosomal subunit protein uL18|Nanoarchaeum equitans (strain

Query: 3 LPVHFEE 9
LP HFEE
Sbjct: 179 LPNHFEE 185


>sp|RL18_IGNH4|LARGE ribosomal subunit protein uL18|Ignicoccus hospitalis (strain KIN4/I

Query: 2 DLPVHFEE 9
D P HFEE
Sbjct: 179 DYPKHFEE 186


>sp|RL18_PYRAE|LARGE ribosomal subunit protein uL18|Pyrobaculum aerophilum (strain ATCC

Query: 3 LPVHFEE 9
LP HFEE
Sbjct: 180 LPEHFEE 186


>sp|RL18_PYRAR|LARGE ribosomal subunit protein uL18|Pyrobaculum arsenaticum (strain DSM

Query: 3 LPVHFEE 9
LP HFEE
Sbjct: 180 LPDHFEE 186


>sp|TF2B_PYRHO|TRANSCRIPTION initiation factor IIB|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LPVHFEEE 10
LP H EEE
Sbjct: 125 LPKHVEEE 132


>sp|TF2B_PYRAB|TRANSCRIPTION initiation factor IIB|Pyrococcus abyssi (strain GE5 /

Query: 3 LPVHFEEE 10
LP H EEE
Sbjct: 125 LPKHVEEE 132


>sp|ASSTI_METAC|L-ASPARTATE semialdehyde sulfurtransferase iron-sulfur subunit|Methanosarcina

Query: 2 DLPVHFEEE 10
D P+H +EE
Sbjct: 71 DRPIHRDEE 79


>sp|RL18_METMP|LARGE ribosomal subunit protein uL18|Methanococcus maripaludis (strain

Query: 2 DLPVHFEE 9
DLP H EE
Sbjct: 178 DLPEHVEE 185


>sp|RL18_METJA|LARGE ribosomal subunit protein uL18|Methanocaldococcus jannaschii

Query: 3 LPVHFEE 9
LP HFEE
Sbjct: 180 LPEHFEE 186


>sp|TF2B1_THEKO|TRANSCRIPTION initiation factor IIB 1|Thermococcus kodakarensis (strain ATCC

Query: 3 LPVHFEEE 10
LP H EEE
Sbjct: 125 LPKHVEEE 132


>sp|TF2B_PYRWO|TRANSCRIPTION initiation factor IIB|Pyrococcus woesei

Query: 3 LPVHFEEE 10
LP H EEE
Sbjct: 125 LPRHVEEE 132


>sp|TF2B_PYRFU|TRANSCRIPTION initiation factor IIB|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LPVHFEEE 10
LP H EEE
Sbjct: 125 LPRHVEEE 132


>sp|RL18_METM7|LARGE ribosomal subunit protein uL18|Methanococcus maripaludis (strain C7

Query: 2 DLPVHFEE 9
DLP H EE
Sbjct: 178 DLPEHVEE 185


>sp|RL18_METM6|LARGE ribosomal subunit protein uL18|Methanococcus maripaludis (strain C6

Query: 2 DLPVHFEE 9
DLP H EE
Sbjct: 178 DLPEHVEE 185


>sp|RL18_METMA|LARGE ribosomal subunit protein uL18|Methanosarcina mazei (strain ATCC

Query: 1 SDLPVHFE 8
SDLP FE
Sbjct: 156 SDLPEQFE 163


>sp|RL18_METAC|LARGE ribosomal subunit protein uL18|Methanosarcina acetivorans (strain

Query: 1 SDLPVHFE 8
SDLP FE
Sbjct: 156 SDLPEQFE 163


>sp|CDC61_METAC|ORC1-TYPE DNA replication protein 1|Methanosarcina acetivorans (strain ATCC

Query: 1 SDLPVHFEEE 10
++L HFEEE
Sbjct: 112 ANLARHFEEE 121


>sp|CDC61_METMA|ORC1-TYPE DNA replication protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SDLPVHFEEE 10
++L HFEEE
Sbjct: 112 ANLARHFEEE 121


>sp|APGM_METKA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanopyrus kandleri (strain AV19 /

Query: 2 DLPVHFE 8
DLPV FE
Sbjct: 143 DLPVEFE 149


>sp|RS2_CALMQ|SMALL ribosomal subunit protein uS2|Caldivirga maquilingensis (strain

Query: 2 DLPVHFEE 9
DLPV +EE
Sbjct: 198 DLPVSWEE 205


>sp|RL18_METKA|LARGE ribosomal subunit protein uL18|Methanopyrus kandleri (strain AV19 /

Query: 2 DLPVHFEE 9
+LP HFEE
Sbjct: 183 ELPEHFEE 190


>sp|RL18_METBF|LARGE ribosomal subunit protein uL18|Methanosarcina barkeri (strain

Query: 1 SDLPVHFE 8
SDLP FE
Sbjct: 156 SDLPEQFE 163


>sp|RL18_HALSA|LARGE ribosomal subunit protein uL18|Halobacterium salinarum (strain ATCC

Query: 3 LPVHFEE 9
LP HF+E
Sbjct: 169 LPAHFDE 175


>sp|RL18_HALS3|LARGE ribosomal subunit protein uL18|Halobacterium salinarum (strain ATCC

Query: 3 LPVHFEE 9
LP HF+E
Sbjct: 169 LPAHFDE 175


>sp|RL18_HALLT|LARGE ribosomal subunit protein uL18|Halorubrum lacusprofundi (strain

Query: 1 SDLPVHFEE 9
+DLP HF++
Sbjct: 167 ADLPEHFDD 175


>sp|RL18_PYRFU|LARGE ribosomal subunit protein uL18|Pyrococcus furiosus (strain ATCC

Query: 3 LPVHFEE 9
LP HFEE
Sbjct: 181 LPEHFEE 187


>sp|RL18_HALMT|LARGE ribosomal subunit protein uL18|Haloferax mediterranei (strain ATCC

Query: 1 SDLPVHFEE 9
++LP HF+E
Sbjct: 167 TNLPEHFDE 175


>sp|SRP54_METKA|SIGNAL recognition particle 54 kDa|Methanopyrus kandleri (strain AV19 /

Query: 2 DLPVHFEE 9
D+PVH E+
Sbjct: 156 DVPVHVED 163


>sp|RL18_PYRHO|LARGE ribosomal subunit protein uL18|Pyrococcus horikoshii (strain ATCC

Query: 3 LPVHFEE 9
LP HFEE
Sbjct: 181 LPEHFEE 187


>sp|RL18_THESM|LARGE ribosomal subunit protein uL18|Thermococcus sibiricus (strain DSM

Query: 3 LPVHFEE 9
LP HFEE
Sbjct: 180 LPEHFEE 186


>sp|RL18_NATPD|LARGE ribosomal subunit protein uL18|Natronomonas pharaonis (strain ATCC

Query: 1 SDLPVHFEE 9
++LP HF+E
Sbjct: 167 TELPDHFDE 175


>sp|RL18_THEGJ|LARGE ribosomal subunit protein uL18|Thermococcus gammatolerans (strain

Query: 3 LPVHFEE 9
LP HFEE
Sbjct: 181 LPEHFEE 187


>sp|RL18_HALVD|LARGE ribosomal subunit protein uL18|Haloferax volcanii (strain ATCC

Query: 1 SDLPVHFEE 9
++LP HF+E
Sbjct: 167 TNLPDHFDE 175


>sp|RL18_THEON|LARGE ribosomal subunit protein uL18|Thermococcus onnurineus (strain NA1)

Query: 3 LPVHFEE 9
LP HFEE
Sbjct: 181 LPEHFEE 187


>sp|SYTC_METS5|THREONINE--TRNA ligase catalytic subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 DLPVHFEE 9
DLP+ F E
Sbjct: 243 DLPIRFSE 250


>sp|RL18_THEKO|LARGE ribosomal subunit protein uL18|Thermococcus kodakarensis (strain

Query: 3 LPVHFEE 9
LP HFEE
Sbjct: 181 LPEHFEE 187


>sp|AATE_METMJ|A-TYPE ATP synthase subunit E|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 DLPVHFEEE 10
DLP F+E+
Sbjct: 95 DLPAEFQEK 103


>sp|THS2_HALVD|CHAPERONIN subunit CTT2|Haloferax volcanii (strain ATCC 29605

Query: 2 DLPVHFEE 9
D+PV F+E
Sbjct: 232 DMPVQFDE 239


>sp|SYTC_SACI2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain L.S.2.15

Query: 2 DLPVHFEE 9
DLP+ F E
Sbjct: 247 DLPIRFSE 254


>sp|SYTC_SACS2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 DLPVHFEE 9
DLP+ F E
Sbjct: 247 DLPIRFSE 254


>sp|SYTC_SACI7|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 DLPVHFEE 9
DLP+ F E
Sbjct: 247 DLPIRFSE 254


>sp|SYTC_SACI4|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 2 DLPVHFEE 9
DLP+ F E
Sbjct: 247 DLPIRFSE 254


>sp|SYTC_SACI1|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 DLPVHFEE 9
DLP+ F E
Sbjct: 247 DLPIRFSE 254


>sp|SYTC_SACI3|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.27)

Query: 2 DLPVHFEE 9
DLP+ F E
Sbjct: 247 DLPIRFSE 254


>sp|SYTC_SACI6|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 2 DLPVHFEE 9
DLP+ F E
Sbjct: 247 DLPIRFSE 254




517|SequenceR|2590|2581|LQCRYSDLPV

>sp|PYRB_META3|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus aeolicus

Query: 1 LQCRYSDLPV 10
L C YS++P+
Sbjct: 112 LACEYSNIPI 121


>sp|G6PI_METJA|GLUCOSE-6-PHOSPHATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LQCRYSDL 8
+ CRYSD+
Sbjct: 321 ISCRYSDI 328


>sp|OTC_METS3|ORNITHINE carbamoyltransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 RYSDLPV 10
+YSD+PV
Sbjct: 110 KYSDVPV 116


>sp|Y1548_ARCFU|UNCHARACTERIZED protein AF_1548|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LQCRYSDLPV 10
++C++ ++PV
Sbjct: 40 IECKFHNIPV 49


>sp|GATA_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 5 YSDLPV 10
YSDLP+
Sbjct: 436 YSDLPI 441


>sp|TRPC_THEKO|INDOLE-3-GLYCEROL phosphate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 CRYSDLPV 10
CR ++LPV
Sbjct: 72 CRETELPV 79


>sp|OTC_METKA|ORNITHINE carbamoyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 4 RYSDLPV 10
RYS++PV
Sbjct: 122 RYSEVPV 128


>sp|RIFK_METB6|RIBOFLAVIN kinase|Methanoregula boonei (strain DSM 21154

Query: 1 LQCRYSDLP 9
+ CR +D+P
Sbjct: 171 MPCRINDIP 179


>sp|QUEE_METHJ|7-CARBOXY-7-DEAZAGUANINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LQCRYSDLP 9
L C Y D P
Sbjct: 63 LSCSYCDTP 71


>sp|QUEE_METTH|7-CARBOXY-7-DEAZAGUANINE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LQCRYSDLP 9
L C Y D P
Sbjct: 36 LNCSYCDTP 44




518|SequenceR|2595|2586|APQIFLQCRY

>sp|NIFE_METTH|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 1 APQIFLQC 8
AP+ FL C
Sbjct: 464 APRTFLNC 471




519|SequenceR|2600|2591|HELIGAPQIF

>sp|RPO11_METTH|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanothermobacter

Query: 1 HELIGAPQIF 10
H ++G PQ++
Sbjct: 45 HPIVGEPQLY 54


>sp|RPO11_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo11|Archaeoglobus fulgidus (strain ATCC

Query: 1 HELIGAPQIF 10
H LIG P+I+
Sbjct: 47 HPLIGEPEIY 56


>sp|THI4_METMP|THIAMINE thiazole synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 ELIGAPQIF 10
E+IG P++F
Sbjct: 97 EVIGEPELF 105


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 2 ELIGAPQI 9
ELIG P I
Sbjct: 541 ELIGCPHI 548


>sp|Y872_METJA|UNCHARACTERIZED lipoprotein MJ0872|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HELIGAPQ 8
H ++GAP+
Sbjct: 125 HTIVGAPK 132




520|SequenceR|2605|2596|SEKYQHELIG

>sp|TFE_HALSA|TRANSCRIPTION factor E|Halobacterium salinarum (strain ATCC 700922

Query: 2 EKYQHELIG 10
+KY HEL+G
Sbjct: 13 QKYLHELVG 21


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SEKYQHELIG 10
SEKY E+IG
Sbjct: 325 SEKYAKEIIG 334


>sp|TFE_HALWD|TRANSCRIPTION factor E|Haloquadratum walsbyi (strain DSM 16790

Query: 2 EKYQHELIG 10
+KY HEL+G
Sbjct: 13 QKYLHELVG 21


>sp|TFE_HALMA|TRANSCRIPTION factor E|Haloarcula marismortui (strain ATCC 43049

Query: 2 EKYQHELIG 10
+KY HEL+G
Sbjct: 13 QKYLHELVG 21


>sp|MDH_SULTO|MALATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EKYQHEL 8
EK++HEL
Sbjct: 40 EKFEHEL 46


>sp|MDH_SACS2|MALATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EKYQHEL 8
EK++HEL
Sbjct: 40 EKFEHEL 46


>sp|TFE_NATPD|TRANSCRIPTION factor E|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EKYQHELIG 10
+KY HEL+G
Sbjct: 13 QKYLHELVG 21


>sp|RNP1_METTH|RIBONUCLEASE P protein component 1|Methanothermobacter thermautotrophicus

Query: 4 YQHELIG 10
++HELIG
Sbjct: 8 FRHELIG 14


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SEKYQH 6
SEKY+H
Sbjct: 382 SEKYEH 387


>sp|MTRF_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit F|Methanothermobacter marburgensis

Query: 3 KYQHELIG 10
KY+++LIG
Sbjct: 21 KYRNQLIG 28


>sp|MTRF_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit F|Methanothermobacter

Query: 3 KYQHELIG 10
KY+++LIG
Sbjct: 21 KYRNQLIG 28


>sp|LMRAC_THEKO|LEUCINE/METHIONINE racemase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 KYQHELIG 10
K +HELIG
Sbjct: 344 KKKHELIG 351


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 SEKYQHELIG 10
S+KY E+IG
Sbjct: 327 SDKYAKEVIG 336


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SEKYQH 6
SEKY+H
Sbjct: 382 SEKYEH 387


>sp|PURL_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EKYQHELIG 10
E+Y HE+ G
Sbjct: 400 EQYDHEVQG 408


>sp|PURL_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus abyssi (strain GE5 /

Query: 2 EKYQHELIG 10
E+Y HE+ G
Sbjct: 400 EQYDHEVQG 408


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SEKYQHELIG 10
+EK+ H L+G
Sbjct: 268 TEKHPHPLVG 277


>sp|TRM14_PYRFU|TRNA (guanine(6)-N2)-methyltransferase|Pyrococcus furiosus (strain ATCC

Query: 2 EKYQHELIG 10
EKY+ LIG
Sbjct: 248 EKYRKHLIG 256


>sp|PURL_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus gammatolerans (strain DSM 15229

Query: 2 EKYQHELIG 10
E+Y HE+ G
Sbjct: 399 EQYDHEVQG 407


>sp|MDH_SULAC|MALATE dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EKYQHEL 8
EK++HE+
Sbjct: 40 EKFEHEI 46


>sp|PURL_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus kodakarensis (strain ATCC

Query: 2 EKYQHELIG 10
E+Y HE+ G
Sbjct: 400 EQYDHEVQG 408




521|SequenceR|2610|2601|SIYTTSEKYQ

***** No hits found ******


522|SequenceR|2615|2606|LEEKWSIYTT

>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 2 EEKWSIY 8
EEKW +Y
Sbjct: 668 EEKWKVY 674


>sp|EF2_METS5|ELONGATION factor 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 LEEKWSIYTT 10
L+EKW+I T
Sbjct: 186 LKEKWAINPT 195


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 2 EEKWSIY 8
E+KW +Y
Sbjct: 672 EDKWKVY 678


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 2 EEKWSIY 8
E+KW +Y
Sbjct: 672 EDKWKVY 678


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 EEKWSIY 8
E+KW +Y
Sbjct: 672 EDKWKVY 678


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 EEKWSIY 8
+EKW +Y
Sbjct: 672 DEKWKVY 678


>sp|METE_METTH|METHIONINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LEEKW 5
LEEKW
Sbjct: 235 LEEKW 239


>sp|RS11_METMJ|SMALL ribosomal subunit protein uS11|Methanoculleus marisnigri

Query: 2 EEKWSI 7
EEKW I
Sbjct: 3 EEKWGI 8


>sp|Y995_META3|UPF0288 protein Maeo_0995|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LEEKWSIYT 9
LE+ W I+T
Sbjct: 190 LEDDWKIFT 198


>sp|AROC_SULAC|CHORISMATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LEEKWSIY 8
+EEKW Y
Sbjct: 373 IEEKWRRY 380


>sp|ACDB1_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 1 LEEKWSIYT 9
L+EK IYT
Sbjct: 531 LDEKLGIYT 539


>sp|SYE_CALMQ|GLUTAMATE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 LEEKW 5
LEEKW
Sbjct: 70 LEEKW 74


>sp|RL11_METS5|LARGE ribosomal subunit protein uL11|Metallosphaera sedula (strain ATCC

Query: 1 LEEKWS 6
+EEKWS
Sbjct: 161 MEEKWS 166


>sp|AROC_SULTO|CHORISMATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LEEKWSIYTT 10
+EE+W+ Y +
Sbjct: 372 IEERWNKYIS 381


>sp|Y1412_METJA|UPF0288 protein MJ1412|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LEEKWSIYT 9
LE+ W I+T
Sbjct: 189 LEDGWRIFT 197


>sp|RPO1C_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma acidophilum (strain ATCC

Query: 2 EEKWSIYT 9
E +W IYT
Sbjct: 356 EHRWVIYT 363


>sp|FSX1_UNCAX|FUSEXIN 1|Uncultured archaeon

Query: 3 EKWSIYT 9
++W IYT
Sbjct: 470 DRWEIYT 476


>sp|RS15_THEAC|SMALL ribosomal subunit protein uS15|Thermoplasma acidophilum (strain

Query: 1 LEEKWSI 7
L+EKW++
Sbjct: 134 LDEKWNL 140


>sp|SYG_METKA|GLYCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 LEEKWSIY 8
+EEKW Y
Sbjct: 46 IEEKWREY 53


>sp|RPO1C_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma volcanium (strain ATCC

Query: 2 EEKWSIYT 9
E +W IYT
Sbjct: 356 EHRWVIYT 363


>sp|SYE_PYRCJ|GLUTAMATE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LEEKW 5
LEEKW
Sbjct: 68 LEEKW 72




523|SequenceR|2620|2611|ERSRHLEEKW

>sp|SYD_THEKO|ASPARTATE--TRNA(ASP) ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 SRHLEEKW 10
+RHL E W
Sbjct: 221 TRHLNEAW 228


>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 1 ERSRHLEE 8
ERS HLEE
Sbjct: 158 ERSPHLEE 165


>sp|SYD_PYRHO|ASPARTATE--TRNA(ASP) ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 SRHLEEKW 10
+RHL E W
Sbjct: 221 TRHLNEAW 228


>sp|SYD_PYRAB|ASPARTATE--TRNA(ASP) ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 SRHLEEKW 10
+RHL E W
Sbjct: 221 TRHLNEAW 228


>sp|CYDK_THEKO|CYTIDINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ERSRHLEEKW 10
ER+R + +KW
Sbjct: 262 ERAREVLKKW 271


>sp|CAPPA_PYRAE|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 RSRHLEEKW 10
R H+EE W
Sbjct: 290 RRLHVEEAW 298


>sp|GFCR_ARCFU|TRANSCRIPTIONAL regulator GfcR|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ERSRHLEEK 9
ER+R L+EK
Sbjct: 9 ERARRLKEK 17


>sp|NADE_ARCFU|NH(3)-DEPENDENT NAD(+) synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ERSRHLEE 8
ERSRH E
Sbjct: 229 ERSRHKRE 236


>sp|SYD_PYRFU|ASPARTATE--TRNA(ASP) ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 SRHLEEKW 10
+RHL E W
Sbjct: 221 TRHLNEAW 228




524|SequenceR|2625|2616|LMCRVERSRH

>sp|COBQ_METJA|PROBABLE cobyric acid synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LMCRVERSRH 10
L CRVE S H
Sbjct: 64 LACRVEPSVH 73


>sp|NADE_ARCFU|NH(3)-DEPENDENT NAD(+) synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 VERSRH 10
VERSRH
Sbjct: 228 VERSRH 233


>sp|GUAAA_ARCFU|GMP synthase [glutamine-hydrolyzing] subunit A|Archaeoglobus fulgidus

Query: 2 MCRVERSRH 10
+C++E RH
Sbjct: 142 ICKIEAMRH 150


>sp|TRPF_METTP|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LMCRVERSRH 10
+ +ERSRH
Sbjct: 28 FVVEIERSRH 37




525|SequenceR|2630|2621|VSPCQLMCRV

>sp|MBD_PICTO|MEVALONATE 3,5-bisphosphate decarboxylase|Picrophilus torridus (strain ATCC

Query: 2 SPCQLMCRV 10
S C + CRV
Sbjct: 73 SSCDVTCRV 81




526|SequenceR|2635|2626|LFSVEVSPCQ

>sp|Y2784_METAR|UPF0179 protein UNCMA_27840|Methanocella arvoryzae (strain DSM 22066

Query: 1 LFSVEVSPCQ 10
+FS EV PC+
Sbjct: 127 VFSEEVGPCK 136


>sp|Y923_METJA|UNCHARACTERIZED protein MJ0923|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LFSVEVSPC 9
+F++E+S C
Sbjct: 219 IFAIEISKC 227


>sp|RIBA_ARCFU|GTP cyclohydrolase-2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 VEVSPCQ 10
+EV PC+
Sbjct: 351 IEVEPCE 357


>sp|DTDA_METM5|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain C5 /

Query: 3 SVEVSPC 9
S E+SPC
Sbjct: 82 SEEISPC 88




527|SequenceR|2640|2631|NVILPLFSVE

>sp|COFD_ARCFU|2-PHOSPHO-L-LACTATE transferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ILPLFSVE 10
ILP+ SVE
Sbjct: 195 ILPILSVE 202


>sp|MTBB3_METMA|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NVILPLF 7
N+I+PLF
Sbjct: 140 NMIIPLF 146


>sp|MTBB3_METAC|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina acetivorans (strain ATCC

Query: 1 NVILPLF 7
N+I+PLF
Sbjct: 140 NMIIPLF 146


>sp|MTBB2_METMA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NVILPLF 7
N+I+PLF
Sbjct: 140 NMIIPLF 146


>sp|MTBB2_METBF|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri (strain Fusaro /

Query: 1 NVILPLF 7
N+I+PLF
Sbjct: 140 NMIIPLF 146


>sp|MTBB2_METAC|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina acetivorans (strain ATCC

Query: 1 NVILPLF 7
N+I+PLF
Sbjct: 140 NMIIPLF 146


>sp|MTBB1_METMA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NVILPLF 7
N+I+PLF
Sbjct: 140 NMIIPLF 146


>sp|MTBB1_METBF|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri (strain Fusaro /

Query: 1 NVILPLF 7
N+I+PLF
Sbjct: 140 NMIIPLF 146


>sp|MTBB1_METAC|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina acetivorans (strain ATCC

Query: 1 NVILPLF 7
N+I+PLF
Sbjct: 140 NMIIPLF 146


>sp|Y150_ARCFU|UNCHARACTERIZED protein AF_0150|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VILPLFS 8
V++PLFS
Sbjct: 4 VVMPLFS 10




528|SequenceR|2645|2636|PLAVTNVILP

>sp|MUTS_HALWD|DNA mismatch repair protein MutS|Haloquadratum walsbyi (strain DSM

Query: 3 AVTNVILP 10
AVTN+I P
Sbjct: 131 AVTNIITP 138


>sp|RNH2_METS3|RIBONUCLEASE HII|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PLAVTNVILP 10
PL + VI+P
Sbjct: 17 PLVIAGVIVP 26




529|SequenceR|2650|2641|YSLEDPLAVT

>sp|AATA_SACI7|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 YSLEDPLAV 9
Y++EDP+AV
Sbjct: 168 YTVEDPIAV 176


>sp|AATA_SACI2|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 YSLEDPLAV 9
Y++EDP+AV
Sbjct: 168 YTVEDPIAV 176


>sp|AATA_SACI1|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 YSLEDPLAV 9
Y++EDP+AV
Sbjct: 168 YTVEDPIAV 176


>sp|AATA_SACI6|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.4 /

Query: 1 YSLEDPLAV 9
Y++EDP+AV
Sbjct: 168 YTVEDPIAV 176


>sp|AATA_SACI4|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.14.25 /

Query: 1 YSLEDPLAV 9
Y++EDP+AV
Sbjct: 168 YTVEDPIAV 176


>sp|AATA_SACI3|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.27)

Query: 1 YSLEDPLAV 9
Y++EDP+AV
Sbjct: 168 YTVEDPIAV 176


>sp|HIS4_METAC|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanosarcina acetivorans

Query: 2 SLEDPLAV 9
SL DPLAV
Sbjct: 30 SLNDPLAV 37


>sp|AATA_SACS2|A-TYPE ATP synthase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 1 YSLEDPLAV 9
Y++EDP+A+
Sbjct: 168 YTVEDPIAI 176


>sp|HIS4_METMA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanosarcina mazei (strain

Query: 2 SLEDPLAV 9
S++DPLAV
Sbjct: 30 SIDDPLAV 37


>sp|PYRH_SACI7|URIDYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 YSLEDPLAV 9
Y L DPLA+
Sbjct: 181 YELLDPLAI 189


>sp|PYRH_SACI6|URIDYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 YSLEDPLAV 9
Y L DPLA+
Sbjct: 181 YELLDPLAI 189


>sp|PYRH_SACI4|URIDYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 YSLEDPLAV 9
Y L DPLA+
Sbjct: 181 YELLDPLAI 189


>sp|PYRH_SACI2|URIDYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 YSLEDPLAV 9
Y L DPLA+
Sbjct: 181 YELLDPLAI 189


>sp|PYRH_SACI1|URIDYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 YSLEDPLAV 9
Y L DPLA+
Sbjct: 181 YELLDPLAI 189


>sp|PYRH_SACS2|URIDYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YSLEDPLAV 9
Y L DPLA+
Sbjct: 182 YELLDPLAI 190


>sp|PYRH_SACI3|URIDYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 YSLEDPLAV 9
Y L DPLA+
Sbjct: 181 YELLDPLAI 189


>sp|PYRH_SULTO|URIDYLATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YSLEDPLAV 9
Y L DPLA+
Sbjct: 181 YELLDPLAI 189


>sp|PYRH_SULAC|URIDYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 YSLEDPLAV 9
Y L DPLA+
Sbjct: 181 YELLDPLAI 189


>sp|GATA_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Natronomonas pharaonis (strain ATCC

Query: 2 SLEDPL 7
SLEDPL
Sbjct: 364 SLEDPL 369


>sp|DTDA_DESA1|D-AMINOACYL-TRNA deacylase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 YSLEDP 6
YS+EDP
Sbjct: 6 YSVEDP 11




530|SequenceR|2655|2646|GHTCIYSLED

>sp|AGLUS_METJA|ARCHAEAL glutamate synthase [NADPH]|Methanocaldococcus jannaschii (strain

Query: 2 HTCIYSLED 10
H IYS+ED
Sbjct: 290 HHDIYSIED 298


>sp|LYSY_HALWD|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 GHTCIYSLED 10
GH C LED
Sbjct: 114 GHACPEYLED 123


>sp|Y1689_METTH|UPF0111 protein MTH_1689|Methanothermobacter thermautotrophicus (strain

Query: 2 HTCIYSLE 9
H C+ SLE
Sbjct: 132 HECVESLE 139


>sp|LEUC_METB6|3-ISOPROPYLMALATE dehydratase large subunit|Methanoregula boonei (strain DSM 21154

Query: 2 HTCIY 6
HTC+Y
Sbjct: 122 HTCMY 126


>sp|LEUC1_ARCFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Archaeoglobus fulgidus (strain ATCC

Query: 2 HTCIY 6
HTC+Y
Sbjct: 123 HTCMY 127


>sp|GATE_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma acidophilum (strain ATCC

Query: 1 GHTCIYSLE 9
G+T +YSL+
Sbjct: 160 GNTVVYSLD 168


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GHTCIYSLE 9
GHT SLE
Sbjct: 778 GHTTFISLE 786


>sp|HMDH_METJA|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HTCIYSLED 10
H C YS+++
Sbjct: 48 HICNYSIDE 56




531|SequenceR|2660|2651|VDWDEGHTCI

>sp|SYP_CENSY|PROLINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 3 WDEGHT 8
W EGHT
Sbjct: 158 WQEGHT 163


>sp|GADH_THEAC|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 WDEGHTCI 10
W+ G +CI
Sbjct: 275 WNAGQSCI 282


>sp|Y817_ARCFU|UNCHARACTERIZED protein AF_0817|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VDWDE 5
VDWDE
Sbjct: 419 VDWDE 423


>sp|SYP_HALWD|PROLINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 WDEGHT 8
W EGHT
Sbjct: 164 WQEGHT 169


>sp|FLPA_METHJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanospirillum hungatei JF-1

Query: 3 WDEGHT 8
WD GH+
Sbjct: 27 WDPGHS 32


>sp|DPOL3_SACSH|DNA polymerase 3|Saccharolobus shibatae (strain ATCC 51178

Query: 4 DEGHTCI 10
DEG++C+
Sbjct: 28 DEGNSCV 34


>sp|DADD_METBF|5'-DEOXYADENOSINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 2 DWDEGH 7
DW EGH
Sbjct: 82 DWLEGH 87


>sp|UVRC_NATPD|UVRABC system protein C|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DWDEG 6
DWD+G
Sbjct: 489 DWDDG 493


>sp|SYP_NATPD|PROLINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 WDEGHTC 9
W EGHT
Sbjct: 161 WQEGHTA 167


>sp|Y872_METJA|UNCHARACTERIZED lipoprotein MJ0872|Methanocaldococcus jannaschii (strain ATCC

Query: 3 WDEGHTCI 10
WDEG+ +
Sbjct: 65 WDEGYCVV 72


>sp|AGLB_METVO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanococcus voltae

Query: 3 WDEGH 7
WD GH
Sbjct: 593 WDNGH 597


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WDEGH 7
WD GH
Sbjct: 630 WDNGH 634


>sp|SYP_HALSA|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 WDEGHTC 9
W EGHT
Sbjct: 163 WQEGHTA 169


>sp|SYP_HALS3|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 WDEGHTC 9
W EGHT
Sbjct: 163 WQEGHTA 169


>sp|SYP_HALLT|PROLINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 WDEGHTC 9
W EGHT
Sbjct: 165 WQEGHTA 171


>sp|DHOM_PYRHO|HOMOSERINE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 WDEGH 7
WDE H
Sbjct: 94 WDEAH 98


>sp|SYE_PYRNV|GLUTAMATE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 VDWDEGH 7
V WDE H
Sbjct: 170 VRWDEEH 176


>sp|COFE_METMA|COENZYME F420:L-glutamate ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 6 GHTCI 10
GHTC+
Sbjct: 100 GHTCV 104


>sp|COFE_METBF|COENZYME F420:L-glutamate ligase|Methanosarcina barkeri (strain Fusaro /

Query: 6 GHTCI 10
GHTC+
Sbjct: 100 GHTCV 104


>sp|COFE_METAC|COENZYME F420:L-glutamate ligase|Methanosarcina acetivorans (strain ATCC

Query: 6 GHTCI 10
GHTC+
Sbjct: 100 GHTCV 104


>sp|SYP_HALMA|PROLINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 WDEGHTC 9
W EGHT
Sbjct: 162 WQEGHTA 168


>sp|Y1530_METJA|UNCHARACTERIZED N-acetyltransferase MJ1530|Methanocaldococcus jannaschii (strain

Query: 1 VDWDEGH 7
+DW GH
Sbjct: 59 MDWGNGH 65


>sp|Y711_METJA|UNCHARACTERIZED protein MJ0711|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VDWDEG 6
+DWD G
Sbjct: 165 LDWDNG 170


>sp|Y3117_METAC|UPF0228 protein MA_3117|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DWDEGHTCI 10
DW G CI
Sbjct: 145 DWVVGKNCI 153


>sp|Y954_METJA|UNCHARACTERIZED protein MJ0954|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VDWDEGHTCI 10
V+WD+G I
Sbjct: 429 VEWDKGEIKI 438


>sp|SYFA_METKA|PHENYLALANINE--TRNA ligase alpha subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 DWDEG 6
+WDEG
Sbjct: 346 EWDEG 350


>sp|Y1807_METBF|PROTEIN Mbar_A1807|Methanosarcina barkeri (strain Fusaro /

Query: 6 GHTCI 10
GHTC+
Sbjct: 158 GHTCL 162




532|SequenceR|2665|2656|HIIYAVDWDE

>sp|CBIT_PYRCJ|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 3 IYAVDWDE 10
+YAVD+DE
Sbjct: 68 VYAVDYDE 75


>sp|PELO_AERPE|PROTEIN pelota homolog|Aeropyrum pernix (strain ATCC 700893

Query: 2 IIYAVDWDE 10
+I AVD+DE
Sbjct: 130 VIAAVDYDE 138


>sp|Y378_METTH|UPF0104 membrane protein MTH_378|Methanothermobacter thermautotrophicus

Query: 1 HIIYAVDWDE 10
++IY V+W E
Sbjct: 156 YLIYLVNWRE 165


>sp|PSB1_CALMQ|PROTEASOME subunit beta 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 IIYAVDW 8
++YAVDW
Sbjct: 125 VLYAVDW 131


>sp|Y2021_HALSA|PUTATIVE heme-binding protein VNG_2021C|Halobacterium salinarum (strain

Query: 1 HIIYAVDWD 9
H Y VDWD
Sbjct: 15 HDCYTVDWD 23


>sp|GLMS_SULTO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Sulfurisphaera tokodaii (strain DSM

Query: 3 IYAVDWD 9
I +VDWD
Sbjct: 239 IRSVDWD 245


>sp|GCSPA_SULAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfolobus

Query: 3 IYAVDWD 9
I+AV WD
Sbjct: 284 IFAVRWD 290


>sp|KPTA_AERPE|PROBABLE RNA 2'-phosphotransferase|Aeropyrum pernix (strain ATCC 700893

Query: 3 IYAVDW 8
+Y VDW
Sbjct: 197 VYTVDW 202


>sp|GCSPA_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 IYAVDWD 9
I+AV WD
Sbjct: 285 IFAVRWD 291


>sp|QUEC_METAC|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HIIYAVDW 8
HI+ +DW
Sbjct: 57 HIVIKLDW 64


>sp|Y709_METJA|UNCHARACTERIZED transporter MJ0709|Methanocaldococcus jannaschii (strain ATCC

Query: 3 IYAVDW 8
IYAV W
Sbjct: 61 IYAVSW 66


>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HIIYAVDW 8
H+ Y++DW
Sbjct: 151 HLGYSIDW 158


>sp|SYL_THEVO|LEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HIIYAVDW 8
H+ Y++DW
Sbjct: 151 HLGYSIDW 158


>sp|THIC_METPE|PHOSPHOMETHYLPYRIMIDINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 HIIYAVDWD 9
H A+DWD
Sbjct: 371 HARKALDWD 379


>sp|PSB1_PYRAR|PROTEASOME subunit beta 1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 IIYAVDW 8
++Y VDW
Sbjct: 112 VMYMVDW 118


>sp|IF6_THEAC|TRANSLATION initiation factor 6|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 IYAVDWDE 10
IYA WD+
Sbjct: 15 IYAKAWDD 22


>sp|GFPS_AERPX|GERANYLFARNESYL diphosphate synthase|Aeropyrum pernix

Query: 1 HIIYAVDW 8
H++Y DW
Sbjct: 88 HVVYGDDW 95


>sp|FRHA_METJA|COENZYME F420 hydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 4 YAVDWDE 10
YA++WD+
Sbjct: 231 YAINWDD 237


>sp|IF6_THEVO|TRANSLATION initiation factor 6|Thermoplasma volcanium (strain ATCC 51530

Query: 3 IYAVDWDE 10
IYA WD+
Sbjct: 17 IYAKAWDD 24


>sp|FER_THEAC|ZINC-CONTAINING ferredoxin|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 AVDWD 9
AVDWD
Sbjct: 63 AVDWD 67




533|SequenceR|2670|2661|LSPYLHIIYA

>sp|Y719_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 LSPYLHIIYA 10
LS Y+HI+Y
Sbjct: 285 LSDYIHIMYG 294


>sp|RL32_AERPE|LARGE ribosomal subunit protein eL32|Aeropyrum pernix (strain ATCC 700893

Query: 1 LSPYLHIIY 9
LSP HI+Y
Sbjct: 111 LSPERHIVY 119


>sp|CCA_METMA|CCA-ADDING enzyme|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PYLHIIY 9
PYL+I+Y
Sbjct: 113 PYLNIVY 119


>sp|CMR5_PYRFU|CRISPR system Cmr subunit Cmr5|Pyrococcus furiosus (strain ATCC 43587

Query: 4 YLHIIY 9
YLHI+Y
Sbjct: 108 YLHIVY 113


>sp|GLMM_PYRAB|PROBABLE phosphoglucosamine mutase|Pyrococcus abyssi (strain GE5 /

Query: 1 LSPYLH 6
+SPYLH
Sbjct: 180 ISPYLH 185


>sp|RFCL_THEPD|REPLICATION factor C large subunit|Thermofilum pendens (strain DSM 2475

Query: 3 PYLHIIY 9
PYL +IY
Sbjct: 381 PYLRVIY 387


>sp|PHR_METTM|DEOXYRIBODIPYRIMIDINE photo-lyase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 LSPYLH 6
+SPYLH
Sbjct: 250 MSPYLH 255


>sp|PHR_METTH|DEOXYRIBODIPYRIMIDINE photo-lyase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LSPYLH 6
+SPYLH
Sbjct: 250 MSPYLH 255


>sp|GLMM_PYRHO|PROBABLE phosphoglucosamine mutase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LSPYLH 6
+SPYLH
Sbjct: 180 VSPYLH 185


>sp|DPOL3_SACS2|DNA polymerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PYLHIIY 9
PY +IIY
Sbjct: 42 PYFYIIY 48


>sp|Y2001_METTM|UNCHARACTERIZED protein MTBMA_p00010|Methanothermobacter marburgensis (strain ATCC

Query: 2 SPYLHII 8
+PYLH++
Sbjct: 364 NPYLHLL 370


>sp|COXX1_CENSY|PROTOHEME IX farnesyltransferase 1|Cenarchaeum symbiosum (strain A)

Query: 2 SPYLHIIYA 10
+PYL II+A
Sbjct: 272 APYLTIIFA 280


>sp|AAT_PYRHO|ASPARTATE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PYLHIIY 9
PY H IY
Sbjct: 206 PYEHFIY 212


>sp|AROE_SACI7|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 LSPYLH 6
LSPY+H
Sbjct: 23 LSPYIH 28


>sp|AROE_SACI6|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LSPYLH 6
LSPY+H
Sbjct: 23 LSPYIH 28


>sp|AROE_SACI4|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.14.25

Query: 1 LSPYLH 6
LSPY+H
Sbjct: 23 LSPYIH 28


>sp|AROE_SACI3|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.16.27)

Query: 1 LSPYLH 6
LSPY+H
Sbjct: 23 LSPYIH 28


>sp|AROE_SACI2|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain L.S.2.15

Query: 1 LSPYLH 6
LSPY+H
Sbjct: 23 LSPYIH 28


>sp|AROE_SACI1|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 LSPYLH 6
LSPY+H
Sbjct: 23 LSPYIH 28


>sp|PANE_ARCFU|2-DEHYDROPANTOATE 2-reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LSPYLHIIYA 10
L Y H++YA
Sbjct: 124 LKDYGHVVYA 133


>sp|AROE_SACS2|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 1 LSPYLH 6
LSPY+H
Sbjct: 23 LSPYIH 28


>sp|COXX_THEVO|PROTOHEME IX farnesyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 SPYLHIIYA 10
SPYL II+
Sbjct: 272 SPYLAIIFV 280


>sp|COXX_THEAC|PROTOHEME IX farnesyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 SPYLHIIY 9
SPYL II+
Sbjct: 272 SPYLAIIF 279




534|SequenceR|2675|2666|LNRLTLSPYL

>sp|VHUB_METJA|POLYFERREDOXIN protein VhuB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NRLTLSPYL 10
NR+ SPYL
Sbjct: 334 NRIEFSPYL 342


>sp|Y378_NANEQ|UPF0173 metal-dependent hydrolase NEQ378|Nanoarchaeum equitans (strain

Query: 2 NRLTLSPYL 10
NRL + PY+
Sbjct: 17 NRLIIDPYI 25


>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 2 NRLTLSPY 9
+RLT +PY
Sbjct: 178 DRLTFTPY 185




535|SequenceR|2680|2671|LSYPLLNRLT

>sp|DAPAL_THEKO|UNCHARACTERIZED DapA-like lyase TK1237|Thermococcus kodakarensis (strain ATCC

Query: 1 LSYPLLNRLT 10
LS PL+ RLT
Sbjct: 140 LSVPLVKRLT 149


>sp|LIPB2_PICTO|PROBABLE octanoyltransferase 2|Picrophilus torridus (strain ATCC 700027

Query: 2 SYPLLNRLT 10
SYP+LN T
Sbjct: 138 SYPMLNEKT 146


>sp|VORC_METTM|KETOISOVALERATE oxidoreductase subunit VorC|Methanothermobacter marburgensis

Query: 2 SYPLLNRL 9
+YP++NR+
Sbjct: 4 AYPVINRV 11


>sp|SYFB_METB6|PHENYLALANINE--TRNA ligase beta subunit|Methanoregula boonei (strain DSM 21154

Query: 1 LSYPLLNRLT 10
LSY L RLT
Sbjct: 6 LSYKYLERLT 15


>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 LSYPLLNRLT 10
L+YPLL LT
Sbjct: 359 LNYPLLVFLT 368




536|SequenceR|2685|2676|ELLYRLSYPL

>sp|CAS1A_ARCFU|CRISPR-ASSOCIATED endonuclease Cas1 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ELLYRLSYPL 10
E+L RLS+PL
Sbjct: 70 EILGRLSHPL 79


>sp|NIFK_METMP|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 3 LYRLSYPL 10
LYR+ YP+
Sbjct: 413 LYRVGYPV 420


>sp|NIFK_METMI|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 3 LYRLSYPL 10
LYR+ YP+
Sbjct: 413 LYRVGYPV 420


>sp|EF1A_AERPE|ELONGATION factor 1-alpha|Aeropyrum pernix (strain ATCC 700893

Query: 2 LLYRLSY 8
LLYRL Y
Sbjct: 26 LLYRLGY 32


>sp|SUI1_SULTO|PROTEIN translation factor SUI1 homolog|Sulfurisphaera tokodaii (strain

Query: 1 ELLYRLSYP 9
ELL ++ YP
Sbjct: 84 ELLMKMGYP 92


>sp|Y856_PYRHO|UNCHARACTERIZED protein PH0856|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 YRLSYPL 10
YRL YP+
Sbjct: 4 YRLLYPM 10


>sp|TBP_METMP|TATA-BOX-BINDING protein|Methanococcus maripaludis (strain DSM 14266

Query: 2 LLYRLSYP 9
L+YRLS P
Sbjct: 132 LVYRLSEP 139


>sp|Y1246_PYRAB|UNCHARACTERIZED protein PYRAB12460|Pyrococcus abyssi (strain GE5 /

Query: 4 YRLSYPL 10
YRL YP+
Sbjct: 4 YRLLYPM 10




537|SequenceR|2690|2681|TEATGELLYR

>sp|Y1298_METVS|UPF0248 protein Mevan_1298|Methanococcus vannielii (strain ATCC 35089

Query: 4 TGELLYR 10
TGE+LY+
Sbjct: 68 TGEILYK 74


>sp|Y1289_METM7|UPF0248 protein MmarC7_1289|Methanococcus maripaludis (strain C7 /

Query: 4 TGELLYR 10
TGE+LY+
Sbjct: 68 TGEILYK 74


>sp|MTM7_METJA|PUTATIVE type II methyltransferase M.MjaORF1200P|Methanocaldococcus

Query: 2 EATGELLYR 10
EA G+L+Y+
Sbjct: 240 EAIGDLMYK 248


>sp|MCRG_METVO|METHYL-COENZYME M reductase subunit gamma|Methanococcus voltae

Query: 2 EATGELLY 9
EATG +LY
Sbjct: 183 EATGHILY 190


>sp|G6PI_HALMA|PROBABLE glucose-6-phosphate isomerase|Haloarcula marismortui (strain ATCC

Query: 2 EATGELLY 9
E+ GELLY
Sbjct: 370 ESVGELLY 377


>sp|SFSA_PYRFU|SUGAR fermentation stimulation protein homolog|Pyrococcus furiosus

Query: 2 EATGELLYR 10
E +GE++YR
Sbjct: 215 ELSGEIIYR 223


>sp|RNP1_HALMA|RIBONUCLEASE P protein component 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 TEATGELLYR 10
TE TG+ L+R
Sbjct: 85 TENTGDSLWR 94


>sp|Y1316_METJA|UPF0248 protein MJ1316|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EATGELLYR 10
+ TGE+LY+
Sbjct: 70 KKTGEILYK 78


>sp|FMDC_METWO|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 1 TEATGELLYR 10
TE+TG +Y+
Sbjct: 362 TESTGSPMYK 371


>sp|FMDC_METTH|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 1 TEATGELLYR 10
TE+TG +Y+
Sbjct: 362 TESTGSPMYK 371


>sp|FMDC_METTM|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 1 TEATGELLYR 10
TE+TG +Y+
Sbjct: 362 TESTGSPMYK 371




538|SequenceR|2695|2686|EALEHTEATG

>sp|AATC_METMA|A-TYPE ATP synthase subunit C|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EALEHTE 7
EAL+HTE
Sbjct: 167 EALKHTE 173


>sp|FAU1_SULAC|PROBABLE ribonuclease FAU-1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EALEHTEATG 10
EA+EH + G
Sbjct: 267 EAIEHVKPNG 276




539|SequenceR|2700|2691|DATSGEALEH

>sp|PYRE_STAMF|OROTATE phosphoribosyltransferase|Staphylothermus marinus (strain ATCC

Query: 2 ATSGEALEH 10
AT+G +LEH
Sbjct: 122 ATTGGSLEH 130


>sp|RS27_THEAC|SMALL ribosomal subunit protein eS27|Thermoplasma acidophilum (strain

Query: 2 ATSGEALE 9
ATSGE +E
Sbjct: 56 ATSGEVVE 63


>sp|DPCKG_METTH|GTP-DEPENDENT dephospho-CoA kinase|Methanothermobacter thermautotrophicus

Query: 1 DATSGEALEH 10
D T+ ALEH
Sbjct: 38 DVTTRNALEH 47


>sp|CSA2B_SACS2|CRISPR-ASSOCIATED aCascade subunit Cas7/Csa2 2|Saccharolobus solfataricus (strain

Query: 4 SGEALEH 10
SGEAL H
Sbjct: 49 SGEALAH 55




540|SequenceR|2705|2696|RSHLVDATSG

>sp|EF2_METS5|ELONGATION factor 2|Metallosphaera sedula (strain ATCC 51363

Query: 4 LVDATSG 10
L+DATSG
Sbjct: 550 LIDATSG 556


>sp|FUMC_METAC|FUMARATE hydratase class II|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RSHLVDAT 8
R+HL DAT
Sbjct: 198 RTHLQDAT 205


>sp|AATA_METB6|A-TYPE ATP synthase subunit A|Methanoregula boonei (strain DSM 21154

Query: 3 HLVDATSG 10
HL D TSG
Sbjct: 280 HLEDPTSG 287


>sp|PSA_METVS|PROTEASOME subunit alpha|Methanococcus vannielii (strain ATCC 35089

Query: 3 HLVDATSG 10
H+V ATSG
Sbjct: 75 HIVAATSG 82


>sp|PSA_METM6|PROTEASOME subunit alpha|Methanococcus maripaludis (strain C6 /

Query: 3 HLVDATSG 10
H+V ATSG
Sbjct: 75 HIVAATSG 82


>sp|PSA_METM7|PROTEASOME subunit alpha|Methanococcus maripaludis (strain C7 /

Query: 3 HLVDATSG 10
H+V ATSG
Sbjct: 75 HIVAATSG 82


>sp|PSA_METM5|PROTEASOME subunit alpha|Methanococcus maripaludis (strain C5 /

Query: 3 HLVDATSG 10
H+V ATSG
Sbjct: 75 HIVAATSG 82


>sp|PSA_METMP|PROTEASOME subunit alpha|Methanococcus maripaludis (strain DSM 14266

Query: 3 HLVDATSG 10
H+V ATSG
Sbjct: 75 HIVAATSG 82




541|SequenceR|2710|2701|IEGSIRSHLV

>sp|CBID_METKA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 IEGSIRSHL 9
IEGSIRS L
Sbjct: 216 IEGSIRSDL 224


>sp|MFNB_METKA|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 GSIRSHLV 10
G+IRSHLV
Sbjct: 222 GAIRSHLV 229


>sp|RIFK_AERPE|RIBOFLAVIN kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 IEGSIRSHLV 10
IEG +R H+V
Sbjct: 84 IEGGVRGHIV 93


>sp|MTXH_METBF|PUTATIVE methyltransferase mtx subunit H|Methanosarcina barkeri (strain

Query: 2 EGSIRSH 8
EG++RSH
Sbjct: 105 EGTVRSH 111


>sp|TRUA_HALMA|TRNA pseudouridine synthase A|Haloarcula marismortui (strain ATCC

Query: 1 IEGSIRSHLV 10
+EG +RS LV
Sbjct: 25 VEGRLRSALV 34


>sp|EF1A_SACS2|ELONGATION factor 1-alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IEGSIRSHLV 10
+EG R H++
Sbjct: 128 VEGQTREHII 137


>sp|GATE_METJA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanocaldococcus jannaschii (strain

Query: 1 IEGSIRSHL 9
IEG I+ HL
Sbjct: 580 IEGIIKEHL 588


>sp|EF1A_HYPBU|ELONGATION factor 1-alpha|Hyperthermus butylicus (strain DSM 5456

Query: 2 EGSIRSHLV 10
EG R HL+
Sbjct: 130 EGQTREHLI 138


>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GSIRSHLV 10
GS+++HL+
Sbjct: 20 GSLKAHLI 27


>sp|AROA_METS3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 IEGSIRSHLV 10
IEG IRS +V
Sbjct: 379 IEGGIRSGVV 388


>sp|GUAAB_NATPD|GMP synthase [glutamine-hydrolyzing] subunit B|Natronomonas pharaonis

Query: 2 EGSIRSH 8
EG+I+SH
Sbjct: 136 EGTIKSH 142


>sp|CARA_METVS|CARBAMOYL phosphate synthase small chain|Methanococcus vannielii (strain ATCC

Query: 2 EGSIRSHL 9
EGSI SH+
Sbjct: 301 EGSILSHV 308


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC

Query: 1 IEGSIRSH 8
I+GSIRS+
Sbjct: 71 IDGSIRSN 78


>sp|GUAAB_HALMA|GMP synthase [glutamine-hydrolyzing] subunit B|Haloarcula marismortui

Query: 2 EGSIRSH 8
EG+I+SH
Sbjct: 136 EGTIKSH 142


>sp|EF1A_METS5|ELONGATION factor 1-alpha|Metallosphaera sedula (strain ATCC 51363

Query: 1 IEGSIRSHLV 10
+EG R H++
Sbjct: 128 LEGQTREHII 137


>sp|RL6_METST|LARGE ribosomal subunit protein uL6|Methanosphaera stadtmanae (strain

Query: 3 GSIRSHL 9
G+IRSH+
Sbjct: 69 GTIRSHI 75




542|SequenceR|2715|2706|LVLEMIEGSI

>sp|CBIHC_ARCFU|COBALAMIN biosynthesis protein CbiHC|Archaeoglobus fulgidus (strain ATCC

Query: 4 EMIEGSI 10
EMIEGS+
Sbjct: 363 EMIEGSL 369


>sp|ARTD_METJA|PROBABLE archaeosortase D|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VLEMIEGSI 10
+L+M+EG+I
Sbjct: 22 ILKMLEGNI 30




543|SequenceR|2720|2711|GQYKVLVLEM

>sp|GATB_METST|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 1 GQYKVLVLEM 10
G YKVL E+
Sbjct: 197 GAYKVLKFEL 206


>sp|Y038_METJA|UNCHARACTERIZED protein MJ0038|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GQYKVLVLEM 10
G+Y+ L++EM
Sbjct: 52 GEYQFLLMEM 61


>sp|GATD_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina mazei (strain ATCC

Query: 1 GQYKVLVLE 9
G YK LVLE
Sbjct: 319 GGYKGLVLE 327


>sp|AMPPA_METTP|AMP phosphorylase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GQYKVLV 7
GQYKV++
Sbjct: 12 GQYKVML 18




544|SequenceR|2725|2716|GNWNKGQYKV

>sp|RL22_METB6|LARGE ribosomal subunit protein uL22|Methanoregula boonei (strain DSM

Query: 1 GNWNKGQYKV 10
GNW+ G+Y V
Sbjct: 76 GNWDAGRYPV 85


>sp|RASEA_METAC|ARCHAEOSINE synthase subunit beta|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 WNKGQYK 9
W KGQY+
Sbjct: 250 WEKGQYR 256


>sp|NCPP_METKA|PROBABLE inosine/xanthosine triphosphatase|Methanopyrus kandleri (strain

Query: 3 WNKGQYKV 10
WN+G Y V
Sbjct: 62 WNRGSYSV 69


>sp|METXA_HALSA|HOMOSERINE O-acetyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 2 NWNKGQY 8
NWN G Y
Sbjct: 186 NWNDGDY 192


>sp|METXA_HALLT|HOMOSERINE O-acetyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 NWNKGQY 8
NWN G Y
Sbjct: 215 NWNGGNY 221


>sp|METXA_METEZ|HOMOSERINE O-acetyltransferase|Methanohalobium evestigatum (strain ATCC

Query: 2 NWNKGQY 8
NWN G Y
Sbjct: 201 NWNSGNY 207


>sp|METXA_METRM|HOMOSERINE O-acetyltransferase|Methanobrevibacter ruminantium (strain ATCC

Query: 3 WNKGQY 8
WN GQY
Sbjct: 202 WNNGQY 207


>sp|METXA_NATPD|HOMOSERINE O-acetyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 NWNKGQY 8
NWN G Y
Sbjct: 195 NWNGGDY 201


>sp|METXA_HALVD|HOMOSERINE O-acetyltransferase|Haloferax volcanii (strain ATCC 29605

Query: 2 NWNKGQY 8
NWN G Y
Sbjct: 204 NWNGGDY 210


>sp|METXA_HALPT|HOMOSERINE O-acetyltransferase|Haloferax prahovense (strain DSM 18310

Query: 2 NWNKGQY 8
NWN G Y
Sbjct: 204 NWNGGDY 210


>sp|METXA_HALGM|HOMOSERINE O-acetyltransferase|Haloferax gibbonsii (strain ATCC 33959

Query: 2 NWNKGQY 8
NWN G Y
Sbjct: 204 NWNGGDY 210


>sp|ELP3_METJA|TRNA uridine(34) acetyltransferase|Methanocaldococcus jannaschii (strain

Query: 3 WNKGQYK 9
W +G+YK
Sbjct: 324 WKRGEYK 330


>sp|METXA_METZD|HOMOSERINE O-acetyltransferase|Methanosalsum zhilinae (strain DSM 4017

Query: 3 WNKGQY 8
WNKG Y
Sbjct: 202 WNKGNY 207


>sp|METXA_HALMA|HOMOSERINE O-acetyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 2 NWNKGQY 8
NW +G Y
Sbjct: 195 NWKQGHY 201


>sp|METXA_METFP|HOMOSERINE O-acetyltransferase|Methanobacterium formicicum (strain DSM 3637

Query: 2 NWNKGQY 8
+WN+G Y
Sbjct: 201 HWNEGNY 207


>sp|FSX1_NATA2|FUSEXIN 1|Natrinema altunense (strain JCM 12890

Query: 1 GNWNKGQYKV 10
G W G+Y++
Sbjct: 600 GRWVDGEYQI 609


>sp|Y138_META3|PROTEIN Maeo_0138|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 NWNKGQY 8
NW+ G+Y
Sbjct: 150 NWDIGEY 156


>sp|CCA_THEKO|CCA-ADDING enzyme|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 WNKGQY 8
WN G+Y
Sbjct: 338 WNTGRY 343


>sp|TMCA_AERPE|TRNA(MET) cytidine acetyltransferase TmcA|Aeropyrum pernix (strain ATCC

Query: 3 WNKGQYK 9
W+ G+YK
Sbjct: 166 WSPGRYK 172


>sp|RNP2_METLZ|RIBONUCLEASE P protein component 2|Methanocorpusculum labreanum (strain ATCC

Query: 3 WNKGQYKV 10
W++G+Y +
Sbjct: 56 WSEGEYAI 63


>sp|AATB_PICTO|A-TYPE ATP synthase subunit B|Picrophilus torridus (strain ATCC 700027

Query: 1 GNWNKGQ 7
G WN G+
Sbjct: 454 GKWNNGK 460


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 4 NKGQYKV 10
NKG YKV
Sbjct: 9 NKGVYKV 15


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 4 NKGQYKV 10
NKG YKV
Sbjct: 9 NKGVYKV 15


>sp|DMD_SACS2|DIPHOSPHOMEVALONATE decarboxylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 WNKGQ 7
WNKG+
Sbjct: 153 WNKGE 157




545|SequenceR|2730|2721|RIRFHGNWNK

>sp|GSA_SULAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IRFHGNWN 9
I+FHGN++
Sbjct: 132 IKFHGNYH 139


>sp|GATA_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Halobacterium salinarum (strain ATCC

Query: 4 FHGNWNK 10
F GNWN+
Sbjct: 284 FDGNWNE 290


>sp|TRM56_PYRFU|TRNA (cytidine(56)-2'-O)-methyltransferase|Pyrococcus furiosus (strain

Query: 2 IRFHGNWNK 10
IRF NW K
Sbjct: 60 IRFEKNWRK 68


>sp|AOCD_METJA|ORNITHINE cyclodeaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IRFHGNW 8
IRF G W
Sbjct: 106 IRFKGKW 112


>sp|GATA_HALMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Haloarcula marismortui (strain ATCC

Query: 4 FHGNWNK 10
+ GNWN+
Sbjct: 286 YDGNWNE 292


>sp|FOR_THELN|TUNGSTEN-CONTAINING formaldehyde ferredoxin oxidoreductase|Thermococcus litoralis

Query: 4 FHGNWNK 10
F+GNW++
Sbjct: 543 FNGNWSR 549


>sp|Y1470_METJA|UNCHARACTERIZED protein MJ1470|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IRFHGNWNK 10
+RFH N++K
Sbjct: 401 VRFHANFHK 409


>sp|Y076_METFV|UNCHARACTERIZED protein Mfer_0076|Methanothermus fervidus (strain ATCC 43054

Query: 2 IRFHGNWN 9
IRF G+W+
Sbjct: 46 IRFGGDWS 53


>sp|DHQS_METKA|3-DEHYDROQUINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 IRFHGNWNK 10
+ F G WN+
Sbjct: 10 VAFEGEWNE 18


>sp|RF1_HALVD|PEPTIDE chain release factor subunit|Haloferax volcanii (strain ATCC

Query: 1 RIRFHGNW 8
R+R++GN+
Sbjct: 81 RLRYYGNF 88


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RFHGNWN 9
+FHGN++
Sbjct: 7 QFHGNYD 13


>sp|Y1487_METJA|UNCHARACTERIZED methyltransferase MJ1487|Methanocaldococcus jannaschii (strain ATCC

Query: 4 FHGNWN 9
FHG W+
Sbjct: 403 FHGTWH 408


>sp|TRPF_HALLT|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 IRFHGNW 8
I+ HG W
Sbjct: 82 IQLHGEW 88


>sp|GATA_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Natronomonas pharaonis (strain ATCC

Query: 6 GNWNK 10
GNWN+
Sbjct: 287 GNWNE 291


>sp|CHEB_METBU|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Methanococcoides

Query: 5 HGNWN 9
+GNWN
Sbjct: 148 NGNWN 152


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 IRFHGNWN 9
++F G+WN
Sbjct: 458 VKFVGDWN 465


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IRFHGNWN 9
++F G+WN
Sbjct: 453 VKFVGDWN 460


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RFHGNWNK 10
RFH W K
Sbjct: 550 RFHRGWMK 557




546|SequenceR|2735|2726|EPLTDRIRFH

>sp|PDXT_HYPBU|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Hyperthermus butylicus (strain

Query: 1 EPLTDRIR 8
EPL DRIR
Sbjct: 64 EPLRDRIR 71


>sp|PDXT_METAR|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanocella arvoryzae (strain

Query: 3 LTDRIRFH 10
LTD +RFH
Sbjct: 179 LTDDLRFH 186


>sp|PELO_METS5|PROTEIN pelota homolog|Metallosphaera sedula (strain ATCC 51363

Query: 1 EPLTDRIRFH 10
+P T R+R H
Sbjct: 67 QPFTSRLRIH 76


>sp|SYW1_HALSA|TRYPTOPHAN--TRNA ligase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 EPLTDRIRF 9
EPL R+RF
Sbjct: 313 EPLRPRVRF 321


>sp|RRP4_IGNAA|EXOSOME complex component Rrp4|Ignisphaera aggregans (strain DSM 17230

Query: 2 PLTDRIR 8
PLTD IR
Sbjct: 119 PLTDNIR 125


>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 DRIRFH 10
DR++FH
Sbjct: 786 DRVKFH 791


>sp|ENGB_HALMA|PROBABLE GTP-binding protein EngB|Haloarcula marismortui (strain ATCC 43049

Query: 1 EPLTDRIRFH 10
EPL + +R H
Sbjct: 183 EPLNEAVRHH 192




547|SequenceR|2740|2731|CVPFFEPLTD

>sp|NDK_THEKO|NUCLEOSIDE diphosphate kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PFFEPLTD 10
PFFEPL D
Sbjct: 61 PFFEPLID 68


>sp|Y1639_METJA|UNCHARACTERIZED protein MJ1639|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PFFEPL 8
PFFEPL
Sbjct: 31 PFFEPL 36


>sp|TRPA_METKA|TRYPTOPHAN synthase alpha chain|Methanopyrus kandleri (strain AV19 /

Query: 2 VPFFEPLTD 10
VPF EP+ D
Sbjct: 54 VPFSEPIAD 62


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 4 FFEPLT 9
FFEPLT
Sbjct: 604 FFEPLT 609


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 4 FFEPLT 9
FFEPLT
Sbjct: 603 FFEPLT 608


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 4 FFEPLT 9
FFEPLT
Sbjct: 603 FFEPLT 608


>sp|YA00_PYRHO|PUTATIVE transport protein PH1000|Pyrococcus horikoshii (strain ATCC

Query: 2 VPFFEPL 8
+PFF PL
Sbjct: 51 LPFFSPL 57


>sp|IDI2_HALSA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Halobacterium salinarum (strain ATCC 700922

Query: 3 PFFEPLTD 10
PF +P TD
Sbjct: 300 PFLKPATD 307


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 4 FFEPLT 9
FFEP+T
Sbjct: 595 FFEPMT 600


>sp|AATC_ARCFU|A-TYPE ATP synthase subunit C|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PFFEPLT 9
P++EPL+
Sbjct: 159 PYYEPLS 165


>sp|PRIL_SULTO|DNA primase large subunit PriL|Sulfurisphaera tokodaii (strain DSM

Query: 3 PFFEPLTD 10
PF +PL D
Sbjct: 10 PFLKPLED 17


>sp|CBIA_METM5|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C5 /

Query: 2 VPFFEPLTD 10
+ FF PL D
Sbjct: 279 IKFFSPLND 287


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 4 FFEPLT 9
FFEP+T
Sbjct: 601 FFEPIT 606


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 4 FFEPLT 9
FFEP+T
Sbjct: 601 FFEPIT 606


>sp|HIS7_METBU|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanococcoides burtonii (strain DSM 6242

Query: 4 FFEPLTD 10
FFE LTD
Sbjct: 137 FFESLTD 143


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 5 FEPLTD 10
FEP+TD
Sbjct: 5121 FEPITD 5126


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 4 FFEPLT 9
FFEP+T
Sbjct: 621 FFEPIT 626


>sp|TRPA_THEKO|TRYPTOPHAN synthase alpha chain|Thermococcus kodakarensis (strain ATCC

Query: 2 VPFFEPLTD 10
+PF +P+ D
Sbjct: 39 IPFSDPMAD 47


>sp|SYS2_METKA|TYPE-2 serine--tRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 CVPFFEPLTD 10
C PF+E L D
Sbjct: 319 CEPFYELLRD 328


>sp|TRPA_PYRFU|TRYPTOPHAN synthase alpha chain|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VPFFEPLTD 10
+PF +P+ D
Sbjct: 39 IPFSDPIAD 47


>sp|TRPA_PYRAB|TRYPTOPHAN synthase alpha chain|Pyrococcus abyssi (strain GE5 /

Query: 2 VPFFEPLTD 10
+PF +P+ D
Sbjct: 39 IPFSDPIAD 47


>sp|TRPA_METVO|TRYPTOPHAN synthase alpha chain|Methanococcus voltae

Query: 2 VPFFEPLTD 10
+PF +P+ D
Sbjct: 58 IPFSDPIAD 66


>sp|DNLI_METJA|DNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FFEPLT 9
FF+PLT
Sbjct: 110 FFQPLT 115


>sp|CBIA_METJA|COBYRINATE a,c-diamide synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VPFFEPLTD 10
+ FF PL D
Sbjct: 275 IEFFSPLKD 283


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 4 FFEPLT 9
FFEP+T
Sbjct: 601 FFEPVT 606


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 4 FFEPLT 9
FFEP+T
Sbjct: 606 FFEPVT 611


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 4 FFEPLT 9
+FEPLT
Sbjct: 602 YFEPLT 607


>sp|BGAL_SACS2|BETA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 5 FEPLTD 10
F+PLTD
Sbjct: 267 FQPLTD 272


>sp|PUR7_CENSY|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Cenarchaeum symbiosum (strain A)

Query: 3 PFFEPLT 9
PFF+P T
Sbjct: 119 PFFDPTT 125


>sp|SURE_METVS|5'-NUCLEOTIDASE SurE|Methanococcus vannielii (strain ATCC 35089

Query: 2 VPFFEPL 8
+ FFEPL
Sbjct: 49 ISFFEPL 55


>sp|PRIS_METBF|DNA primase small subunit PriS|Methanosarcina barkeri (strain Fusaro /

Query: 5 FEPLTD 10
F+PLTD
Sbjct: 348 FDPLTD 353


>sp|PRIS_METTH|DNA primase small subunit PriS|Methanothermobacter

Query: 2 VPFFEPLT 9
+P FEP T
Sbjct: 2 MPMFEPAT 9




548|SequenceR|2745|2736|SDSSFCVPFF

>sp|PURP_METKA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanopyrus kandleri (strain AV19 /

Query: 2 DSSFCVPFF 10
++ FCVP F
Sbjct: 105 ENEFCVPMF 113


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 SDSSFCVPF 9
SD+SF +P+
Sbjct: 487 SDNSFLIPY 495


>sp|PRIL_METBF|DNA primase large subunit PriL|Methanosarcina barkeri (strain Fusaro /

Query: 3 SSFCVPF 9
SSFC P+
Sbjct: 193 SSFCAPY 199


>sp|ASSY_METHJ|ARGININOSUCCINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DSSFCVPFF 10
D+S C+P
Sbjct: 15 DTSICIPLL 23


>sp|ASSY_METBU|ARGININOSUCCINATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 DSSFCVPFF 10
D+S C+P
Sbjct: 14 DTSICIPLL 22


>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 2 DSSFCVPFF 10
D+S VPF+
Sbjct: 155 DASLMVPFY 163


>sp|PRIL_METMA|DNA primase large subunit PriL|Methanosarcina mazei (strain ATCC

Query: 3 SSFCVPF 9
SSFC P+
Sbjct: 193 SSFCSPY 199


>sp|PRIL_METAC|DNA primase large subunit PriL|Methanosarcina acetivorans (strain ATCC

Query: 3 SSFCVPF 9
S+FC P+
Sbjct: 193 SAFCAPY 199




549|SequenceR|2750|2741|TTVETSDSSF

>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 TTVETSDSS 9
TTVE+ D+S
Sbjct: 43 TTVESRDTS 51


>sp|SYM_PICTO|METHIONINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 ETSDSSF 10
ET DSSF
Sbjct: 366 ETGDSSF 372


>sp|NADM_METMA|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VETSDSSF 10
V TSDS+F
Sbjct: 164 VSTSDSNF 171




550|SequenceR|2755|2746|VSLDVTTVET

>sp|COFC_META3|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VSLDVTTVE 9
+S+D+ TVE
Sbjct: 173 ISIDINTVE 181




551|SequenceR|2760|2751|IRRVHVSLDV

>sp|MOAA_THEAC|PROBABLE GTP 3',8-cyclase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RRVHVSLD 9
RR H+SLD
Sbjct: 199 RRYHISLD 206


>sp|PCNA_NATPD|DNA polymerase sliding clamp|Natronomonas pharaonis (strain ATCC 35678

Query: 2 RRVHVSLD 9
R++H+SLD
Sbjct: 95 RKLHISLD 102


>sp|RBL_METAC|RIBULOSE bisphosphate carboxylase|Methanosarcina acetivorans (strain ATCC

Query: 1 IRRVHVSLDV 10
IRR+HV D+
Sbjct: 227 IRRLHVLKDL 236


>sp|ARFB_METS3|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanobrevibacter smithii (strain

Query: 4 VHVSLD 9
VHVSLD
Sbjct: 76 VHVSLD 81


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 1 IRRVHVSLDV 10
+RR+ ++LDV
Sbjct: 808 VRRIALALDV 817


>sp|SYDND_METTH|ASPARTATE--TRNA(ASP/ASN) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 IRRVHVSLDV 10
+RR H S D+
Sbjct: 6 LRRTHYSKDI 15


>sp|PCNA_HALMA|DNA polymerase sliding clamp|Haloarcula marismortui (strain ATCC 43049

Query: 2 RRVHVSLD 9
R++H+S+D
Sbjct: 95 RKLHISID 102




552|SequenceR|2765|2756|VMRSGIRRVH

>sp|GLKA_THEKO|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus kodakarensis (strain ATCC

Query: 3 RSGIRRVH 10
++G+RR+H
Sbjct: 332 KTGVRRIH 339


>sp|TYW3_SACS2|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 2 MRSGIRRVH 10
+R+GIR VH
Sbjct: 141 LRTGIRMVH 149


>sp|GGPPS_GEOAI|GERANYLGERANYL pyrophosphate synthase|Geoglobus acetivorans

Query: 2 MRSGIRRVH 10
MR G++ VH
Sbjct: 89 MRRGVKTVH 97


>sp|GLKA_PYRFU|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RSGIRRVH 10
++G++R+H
Sbjct: 333 KTGVKRIH 340




553|SequenceR|2770|2761|SFVSLVMRSG

>sp|ARGB_METAR|ACETYLGLUTAMATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 3 VSLVMRSG 10
VSL+MR G
Sbjct: 113 VSLIMRHG 120




554|SequenceR|2775|2766|ILWYPSFVSL

>sp|PSB_ARCPA|PROTEASOME subunit beta|Archaeoglobus profundus (strain DSM 5631

Query: 1 ILWYPSFVSL 10
+ W+P FV L
Sbjct: 102 VRWFPYFVQL 111


>sp|RL6_HALWD|LARGE ribosomal subunit protein uL6|Haloquadratum walsbyi (strain DSM

Query: 2 LWYPS 6
LWYPS
Sbjct: 34 LWYPS 38


>sp|SERK_THEKO|ADP-DEPENDENT L-serine kinase SerK|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 WYPSF 7
WYP+F
Sbjct: 102 WYPAF 106


>sp|PURT_METAR|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocella arvoryzae

Query: 3 WYPSF 7
WYP F
Sbjct: 353 WYPQF 357


>sp|EF1A_HYPBU|ELONGATION factor 1-alpha|Hyperthermus butylicus (strain DSM 5456

Query: 1 ILWYPSFVSL 10
++W+PS +++
Sbjct: 334 VIWHPSAITV 343


>sp|EF1A_AERPE|ELONGATION factor 1-alpha|Aeropyrum pernix (strain ATCC 700893

Query: 1 ILWYPSFVSL 10
++W+PS +++
Sbjct: 332 VIWHPSAITV 341


>sp|SYW_SULTO|TRYPTOPHAN--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ILWYPSF 7
I+WYP+
Sbjct: 192 IIWYPAL 198


>sp|EF1A_IGNH4|ELONGATION factor 1-alpha|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 ILWYPSFVSL 10
++W+PS +++
Sbjct: 336 VIWHPSAIAV 345


>sp|URE1_NATPD|UREASE subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ILWYPSFVSL 10
+LW P+F +
Sbjct: 436 VLWEPAFFGI 445


>sp|ARLY_METLZ|ARGININOSUCCINATE lyase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 ILWYPSFVSL 10
ILW SFV
Sbjct: 259 ILWSTSFVKF 268


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ILWYPSFVSL 10
+ WYP +V +
Sbjct: 438 VTWYPEWVKI 447


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 ILWYPSFVSL 10
+ WYP +V +
Sbjct: 438 VTWYPDWVKI 447


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ILWYPSFVSL 10
+ WYP +V +
Sbjct: 438 VTWYPDWVKI 447


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ILWYPSFVSL 10
+ WYP +V +
Sbjct: 438 VTWYPEWVKV 447


>sp|RL6_METAC|LARGE ribosomal subunit protein uL6|Methanosarcina acetivorans (strain

Query: 2 LWYPSFV 8
LWYP +
Sbjct: 37 LWYPGIM 43


>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 3 WYPSFV 8
WYP F+
Sbjct: 342 WYPVFM 347


>sp|URE1_HALWD|UREASE subunit alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ILWYPSFVSL 10
+LW P F +
Sbjct: 436 VLWEPEFYGI 445


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ILWYPSFVSL 10
I WYP ++ +
Sbjct: 369 IKWYPEYMKV 378


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ILWYPSFVSL 10
I WYP ++ +
Sbjct: 369 IKWYPEYMKV 378


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ILWYPSFVSL 10
I WYP ++ +
Sbjct: 369 INWYPEYMKV 378




555|SequenceR|2780|2771|RTTKNILWYP

>sp|RNP1_THEON|RIBONUCLEASE P protein component 1|Thermococcus onnurineus (strain NA1)

Query: 2 TTKNILWY 9
T KNILW+
Sbjct: 39 TAKNILWH 46


>sp|PYRK_ARCFU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Archaeoglobus fulgidus

Query: 1 RTTKNILW 8
RT KN+ W
Sbjct: 123 RTAKNLFW 130


>sp|KAE1B_METLZ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 TTKNILWY 9
TT N++W+
Sbjct: 444 TTSNMIWH 451


>sp|KUP_METBF|PROBABLE potassium transport system protein|Methanosarcina barkeri (strain

Query: 3 TKNILW 8
TKNI+W
Sbjct: 565 TKNIIW 570


>sp|APGM_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TTKNILWYP 10
+T+NI +YP
Sbjct: 131 STENIRFYP 139


>sp|Y1398_METMP|UNCHARACTERIZED metallohydrolase MMP1398|Methanococcus maripaludis (strain DSM

Query: 4 KNILW 8
KNILW
Sbjct: 199 KNILW 203


>sp|Y627_METJA|UNCHARACTERIZED protein MJ0627|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TKNILWYP 10
+KN+L YP
Sbjct: 103 SKNVLVYP 110


>sp|TRPF_PYRFU|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RTTKNILW 8
R KN++W
Sbjct: 201 RRAKNVVW 208


>sp|Y1301_METJA|UNCHARACTERIZED ATP-binding protein MJ1301|Methanocaldococcus jannaschii (strain

Query: 1 RTTKNILWY 9
+TTKN+ Y
Sbjct: 122 KTTKNVFRY 130


>sp|RNP1_THEKO|RIBONUCLEASE P protein component 1|Thermococcus kodakarensis (strain ATCC

Query: 2 TTKNILWY 9
T KNI+W+
Sbjct: 39 TRKNIIWH 46


>sp|Y439_METJA|UNCHARACTERIZED ATP-binding protein MJ0439|Methanocaldococcus jannaschii (strain

Query: 1 RTTKNILWY 9
+TTKN+ Y
Sbjct: 127 KTTKNVFKY 135


>sp|Y074_METJA|UNCHARACTERIZED ATP-binding protein MJ0074|Methanocaldococcus jannaschii (strain

Query: 1 RTTKNILWY 9
+TTKN+ Y
Sbjct: 115 KTTKNVFRY 123


>sp|KUP_METHJ|PROBABLE potassium transport system protein|Methanospirillum hungatei JF-1

Query: 3 TKNILW 8
T+NI+W
Sbjct: 573 TRNIIW 578


>sp|Y1010_METJA|UNCHARACTERIZED ATP-binding protein MJ1010|Methanocaldococcus jannaschii (strain

Query: 1 RTTKNILWY 9
+TTKN+ Y
Sbjct: 133 KTTKNVFKY 141




556|SequenceR|2785|2776|RYQLVRTTKN

>sp|RNP4_METPE|RIBONUCLEASE P protein component 4|Methanosphaerula palustris (strain ATCC

Query: 1 RYQLVRT 7
RYQ+VRT
Sbjct: 97 RYQVVRT 103




557|SequenceR|2790|2781|HIDESRYQLV

>sp|PYRE_PYRAE|OROTATE phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 HIDESRYQLV 10
HI E RY+ V
Sbjct: 175 HIGEERYRSV 184


>sp|ENDA_SACS2|TRNA-SPLICING endonuclease|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IDESRY 7
IDESRY
Sbjct: 16 IDESRY 21


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 HIDESRYQL 9
H +ESRY +
Sbjct: 1926 HFEESRYTV 1934


>sp|ENDA_SACI6|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain M.16.4 /

Query: 1 HIDESRY 7
++DESRY
Sbjct: 15 NVDESRY 21


>sp|ENDA_SACI4|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain M.14.25 /

Query: 1 HIDESRY 7
++DESRY
Sbjct: 15 NVDESRY 21


>sp|ENDA_SACI3|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain M.16.27)

Query: 1 HIDESRY 7
++DESRY
Sbjct: 15 NVDESRY 21




558|SequenceR|2795|2786|APHKVHIDES

>sp|KHSE_HALLT|HOMOSERINE kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 APHKVHIDE 9
AP ++HID+
Sbjct: 69 APARIHIDK 77


>sp|GFCR_HALMA|TRANSCRIPTIONAL regulator GfcR|Haloarcula marismortui (strain ATCC 43049

Query: 1 APHKVHIDES 10
PH +H+D S
Sbjct: 55 GPHDIHVDWS 64


>sp|FAU1_SACI7|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 PHKVHIDE 9
P K+H+DE
Sbjct: 218 PDKLHLDE 225


>sp|FAU1_SACI2|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 PHKVHIDE 9
P K+H+DE
Sbjct: 218 PDKLHLDE 225


>sp|RFRNP_META3|RNA-FREE ribonuclease P|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 APHKVHIDE 9
A HK H DE
Sbjct: 152 ATHKEHTDE 160


>sp|FAU1_SACI6|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.4 /

Query: 2 PHKVHIDE 9
P K+H+DE
Sbjct: 218 PDKLHLDE 225


>sp|FAU1_SACI4|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PHKVHIDE 9
P K+H+DE
Sbjct: 218 PDKLHLDE 225


>sp|FAU1_SACI3|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.27)

Query: 2 PHKVHIDE 9
P K+H+DE
Sbjct: 218 PDKLHLDE 225


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PHKVHIDE 9
PH+ ++DE
Sbjct: 491 PHRPYVDE 498


>sp|IMDH_THEAC|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 APHKVHIDES 10
AP V IDE+
Sbjct: 162 APENVDIDEA 171


>sp|RHAD_THEAC|L-RHAMNOSE 1-dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC

Query: 3 HKVHIDES 10
HKV +D+S
Sbjct: 59 HKVKVDQS 66


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PHKVHIDE 9
PH+ ++DE
Sbjct: 491 PHRPYVDE 498


>sp|MTAD_NATPD|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 HKVHIDES 10
H VH+DE+
Sbjct: 246 HGVHVDET 253


>sp|MTXH_METAC|PUTATIVE methyltransferase mtx subunit H|Methanosarcina acetivorans

Query: 2 PHKVHI 7
PH VHI
Sbjct: 71 PHMVHI 76


>sp|MTAD_HALMA|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Haloarcula marismortui (strain ATCC 43049

Query: 3 HKVHIDES 10
H VH+D+S
Sbjct: 248 HGVHVDDS 255




559|SequenceR|2800|2791|IDRFDAPHKV

>sp|ATGT_THEVO|TRNA-GUANINE(15) transglycosylase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IDRFDAPH 8
I RFD PH
Sbjct: 12 IARFDTPH 19


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 1 IDRFDAPHKV 10
+DRFD P ++
Sbjct: 1 MDRFDVPKEI 10


>sp|HMEC_ARCFU|HDR-LIKE menaquinol oxidoreductase cytochrome b-like|Archaeoglobus

Query: 2 DRFDAPH 8
DRFD+P+
Sbjct: 57 DRFDSPY 63


>sp|T2M5_METJA|TYPE II restriction enzyme MjaV|Methanocaldococcus jannaschii (strain

Query: 3 RFDAPH 8
R+DAPH
Sbjct: 170 RYDAPH 175


>sp|DGGGP_METST|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 IDRFDAPHK 9
IDR +AP++
Sbjct: 59 IDRINAPNR 67


>sp|SYG_ARCFU|GLYCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IDRFDAPHKV 10
+D+FD+ H++
Sbjct: 236 VDKFDSQHEI 245


>sp|MCRY_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IDRFDAP 7
+D FDAP
Sbjct: 148 VDMFDAP 154


>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IDRFDAPH 8
IDR D PH
Sbjct: 43 IDRDDLPH 50


>sp|ACDB2_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 4 FDAPH 8
FDAPH
Sbjct: 271 FDAPH 275


>sp|ACDB2_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 4 FDAPH 8
FDAPH
Sbjct: 271 FDAPH 275


>sp|HEM2_METJA|DELTA-AMINOLEVULINIC acid dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DRFDAP 7
DRFD P
Sbjct: 271 DRFDVP 276


>sp|PDXT_THEON|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Thermococcus onnurineus (strain

Query: 1 IDRFDAPHKV 10
+D F+AP K+
Sbjct: 121 VDSFEAPLKL 130


>sp|PDXT_THEGJ|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Thermococcus gammatolerans

Query: 1 IDRFDAPHKV 10
+D F+AP K+
Sbjct: 121 VDSFEAPVKL 130


>sp|PDXT_THEKO|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Thermococcus kodakarensis

Query: 1 IDRFDAPHKV 10
+D F+AP K+
Sbjct: 121 VDSFEAPIKL 130


>sp|RPO2C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 2 DRFDAPHK 9
DRF+ P K
Sbjct: 255 DRFEIPEK 262


>sp|PDXT_PYRHO|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrococcus horikoshii (strain

Query: 1 IDRFDAPHKV 10
+D F+AP K+
Sbjct: 120 VDSFEAPVKL 129


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii (strain

Query: 1 IDRFDAPHK 9
+DRF+ P K
Sbjct: 259 MDRFEIPDK 267


>sp|RPO2C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 2 DRFDAPHK 9
DRF+ P K
Sbjct: 255 DRFEIPEK 262


>sp|MTAD_HALSA|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Halobacterium salinarum (strain ATCC 700922

Query: 4 FDAPH 8
FDAPH
Sbjct: 366 FDAPH 370


>sp|RPO2C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanococcus vannielii (strain ATCC

Query: 1 IDRFDAPHK 9
+D+F+ P K
Sbjct: 255 LDKFEVPEK 263


>sp|PDXT_PYRFU|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrococcus furiosus (strain ATCC

Query: 1 IDRFDAPHKV 10
+D F+AP K+
Sbjct: 121 VDSFEAPVKL 130


>sp|RFCS_HALSA|REPLICATION factor C small subunit|Halobacterium salinarum (strain ATCC

Query: 1 IDRFDAPH 8
+DR D PH
Sbjct: 38 VDRDDLPH 45


>sp|RFCS_HALS3|REPLICATION factor C small subunit|Halobacterium salinarum (strain ATCC 29341

Query: 1 IDRFDAPH 8
+DR D PH
Sbjct: 38 VDRDDLPH 45




560|SequenceR|2805|2796|FSFLIIDRFD

>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 FLIIDRFD 10
++++DRFD
Sbjct: 660 YMVLDRFD 667


>sp|Y897_METS5|UPF0248 protein Msed_0897|Metallosphaera sedula (strain ATCC 51363

Query: 1 FSFLIIDRF 9
+S LI+DRF
Sbjct: 20 YSVLIVDRF 28


>sp|TRUB_PYRCJ|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum calidifontis (strain

Query: 1 FSFLIIDR 8
+SFLI+D+
Sbjct: 35 YSFLILDK 42


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 FLIIDRFD 10
++I+DRF+
Sbjct: 655 YMILDRFE 662


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 FLIIDRFD 10
++++D+FD
Sbjct: 708 YMVLDKFD 715




561|SequenceR|2810|2801|INKKKFSFLI

>sp|SQRD_ACIAM|SULFIDE-QUINONE reductase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 INKKKFSFL 9
INK +FS+
Sbjct: 33 INKSRFSYF 41


>sp|RPO1C_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma acidophilum (strain

Query: 1 INKKKFSF 8
INKK F++
Sbjct: 41 INKKNFTY 48


>sp|PMDHS_METJA|PHOSPHOMEVALONATE dehydratase small subunit|Methanocaldococcus jannaschii (strain

Query: 1 INKKKFSFL 9
++KK FSFL
Sbjct: 19 VSKKPFSFL 27




562|SequenceR|2815|2806|KNKTFINKKK

>sp|SRP54_METM7|SIGNAL recognition particle 54 kDa|Methanococcus maripaludis (strain C7

Query: 1 KNKTFINKK 9
KN TF++KK
Sbjct: 17 KNATFVDKK 25


>sp|SRP54_METM6|SIGNAL recognition particle 54 kDa|Methanococcus maripaludis (strain C6

Query: 1 KNKTFINKK 9
KN TF++KK
Sbjct: 17 KNATFVDKK 25


>sp|SRP54_METMP|SIGNAL recognition particle 54 kDa|Methanococcus maripaludis (strain DSM

Query: 1 KNKTFINKK 9
KN TF++KK
Sbjct: 17 KNATFVDKK 25


>sp|SRP54_METM5|SIGNAL recognition particle 54 kDa|Methanococcus maripaludis (strain C5

Query: 1 KNKTFINKK 9
KN TF++KK
Sbjct: 17 KNATFVDKK 25


>sp|SRP54_METVS|SIGNAL recognition particle 54 kDa|Methanococcus vannielii (strain ATCC

Query: 1 KNKTFINKK 9
KN TF++KK
Sbjct: 17 KNATFVDKK 25


>sp|CDPAS_METVS|CDP-ARCHAEOL synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 NKTFINKKK 10
NK FI++K+
Sbjct: 36 NKNFIDQKR 44


>sp|SRP54_META3|SIGNAL recognition particle 54 kDa|Methanococcus aeolicus (strain ATCC

Query: 1 KNKTFINKK 9
KN TF++KK
Sbjct: 17 KNATFVDKK 25


>sp|THIDN_METJA|BIFUNCTIONAL thiamine biosynthesis protein ThiDN|Methanocaldococcus jannaschii

Query: 2 NKTFINKKK 10
N T+INK+K
Sbjct: 234 NPTYINKEK 242


>sp|T2M1_METJA|TYPE II restriction enzyme MjaI|Methanocaldococcus jannaschii (strain

Query: 1 KNKTFINKKK 10
K+KT++N++K
Sbjct: 178 KSKTYVNQEK 187




563|SequenceR|2820|2811|IKLQVKNKTF

>sp|ENO_METST|ENOLASE stadtmanae (strain ATCC 43021

Query: 2 KLQVKNKTF 10
K+Q K+KTF
Sbjct: 185 KIQEKDKTF 193


>sp|Y133_THEAC|PUTATIVE quercetin 2,3-dioxygenase Ta0133|Thermoplasma acidophilum (strain

Query: 1 IKLQVKNKTF 10
I Q+K KTF
Sbjct: 25 ITYQIKGKTF 34


>sp|NADA_SULTO|QUINOLINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IKLQVKNKTF 10
+KLQV KTF
Sbjct: 240 LKLQVPEKTF 249




564|SequenceR|2825|2816|WASTSIKLQV

>sp|UPPS_PYRAE|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Pyrobaculum

Query: 1 WASTSIKL 8
WAS S+K+
Sbjct: 2 WASGSVKI 9


>sp|RL30_CENSY|LARGE ribosomal subunit protein uL30|Cenarchaeum symbiosum (strain A)

Query: 1 WASTSIKL 8
WA T++KL
Sbjct: 19 WAETTLKL 26




565|SequenceR|2830|2821|SFSSSWASTS

>sp|MDH_THETK|MALATE dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 2 FSSSWA 7
FSS+WA
Sbjct: 220 FSSNWA 225




566|SequenceR|2835|2826|GVTDLSFSSS

>sp|ARGC_METPE|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GVTDLSFSS 9
G TDLSF++
Sbjct: 50 GFTDLSFTN 58


>sp|LYSY_NITMS|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 GVTDLSFS 8
G TDL+FS
Sbjct: 50 GFTDLTFS 57


>sp|LYSY_CENSY|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 GVTDLSFS 8
G TDL+FS
Sbjct: 50 GFTDLTFS 57


>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GVTDLSFSSS 10
G+T LS SSS
Sbjct: 96 GITGLSLSSS 105


>sp|SYE_METMJ|GLUTAMATE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GVTDLSFS 8
G TD+SFS
Sbjct: 383 GETDISFS 390


>sp|Y923_METJA|UNCHARACTERIZED protein MJ0923|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GVTDLSFSS 9
G T LSFSS
Sbjct: 165 GATILSFSS 173


>sp|SYE_METLZ|GLUTAMATE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GVTDLSFS 8
G TD+SFS
Sbjct: 385 GDTDISFS 392




567|SequenceR|2840|2831|VCGYSGVTDL

>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 1 VCGYSGVTDL 10
+CG+ GVT L
Sbjct: 589 LCGHDGVTHL 598


>sp|HYPA_METAC|HYDROGENASE maturation factor HypA|Methanosarcina acetivorans (strain ATCC

Query: 2 CGYSGVTD 9
CGY+G D
Sbjct: 75 CGYTGTVD 82


>sp|SYK_PICTO|LYSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 CGYSGVTDL 10
CGY+G D+
Sbjct: 190 CGYTGKADI 198


>sp|HYPA_METMA|HYDROGENASE maturation factor HypA|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CGYSGVTD 9
CGY+G D
Sbjct: 75 CGYTGTID 82


>sp|HYPA_METBF|HYDROGENASE maturation factor HypA|Methanosarcina barkeri (strain Fusaro /

Query: 2 CGYSGVTD 9
CGY G D
Sbjct: 75 CGYKGAVD 82


>sp|HYPA_METTH|HYDROGENASE maturation factor HypA|Methanothermobacter thermautotrophicus

Query: 2 CGYSGVTD 9
CGY GV +
Sbjct: 75 CGYEGVVE 82


>sp|Y760_METJA|UNCHARACTERIZED protein MJ0760|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VCGYSGVTDL 10
+CG + +TDL
Sbjct: 106 ICGKNSLTDL 115


>sp|SYS_METMJ|SERINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 GYSGVTDL 10
Y GVTDL
Sbjct: 205 AYEGVTDL 212


>sp|SYS_METB6|SERINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 4 YSGVTDL 10
Y GVTDL
Sbjct: 206 YEGVTDL 212


>sp|SYS_METAR|SERINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 4 YSGVTDL 10
Y GVTDL
Sbjct: 206 YEGVTDL 212


>sp|RL40_METST|LARGE ribosomal subunit protein eL40|Methanosphaera stadtmanae (strain

Query: 2 CGYSGV 7
CGY+G+
Sbjct: 34 CGYTGL 39


>sp|RL40_METS3|LARGE ribosomal subunit protein eL40|Methanobrevibacter smithii (strain

Query: 2 CGYSGV 7
CGY+G+
Sbjct: 34 CGYTGL 39


>sp|TYW1_METJA|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Methanocaldococcus jannaschii

Query: 1 VCGYSGVTD 9
+ GY+GV D
Sbjct: 107 IMGYAGVLD 115


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 CGYSGVTDL 10
CG+SG+ +
Sbjct: 200 CGHSGIVPM 208


>sp|DHQS_METS3|3-DEHYDROQUINATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VCGYSGVTD 9
VC Y +TD
Sbjct: 89 VCAYVEITD 97


>sp|SYK_THEKO|LYSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 CGYSGVTDL 10
CG G TD+
Sbjct: 202 CGAEGETDI 210


>sp|FDHD_PICTO|SULFUR carrier protein FdhD|Picrophilus torridus (strain ATCC 700027

Query: 2 CGYSGVTDL 10
CG G TD+
Sbjct: 105 CGVCGKTDI 113


>sp|TRPF_HALVD|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Haloferax volcanii (strain ATCC 29605

Query: 1 VCGYSGVTDL 10
VCG + TDL
Sbjct: 6 VCGVTDETDL 15




568|SequenceR|2845|2836|NAPCKVCGYS

>sp|TF2B1_THEKO|TRANSCRIPTION initiation factor IIB 1|Thermococcus kodakarensis (strain ATCC

Query: 4 CKVCGY 9
CKVCGY
Sbjct: 26 CKVCGY 31


>sp|ISF_METTE|IRON-SULFUR flavoprotein|Methanosarcina thermophila

Query: 2 APCKVCG 8
APCK CG
Sbjct: 45 APCKACG 51


>sp|GUAAA_METJA|GMP synthase [glutamine-hydrolyzing] subunit A|Methanocaldococcus

Query: 4 CKVCGY 9
CKVCGY
Sbjct: 180 CKVCGY 185


>sp|PUS10_METTP|TRNA pseudouridine synthase Pus10|Methanothrix thermoacetophila (strain

Query: 3 PCKVCG 8
PC+VCG
Sbjct: 220 PCRVCG 225


>sp|RF12_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 4 CKVCGY 9
C+VCGY
Sbjct: 330 CRVCGY 335


>sp|Y1312_METJA|UPF0026 protein MJ1312|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PCKVCGY 9
PCK C Y
Sbjct: 23 PCKFCSY 29


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 2 APCKVCGYS 10
A C VCG+S
Sbjct: 1727 ATCPVCGWS 1735


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 NAPCKVCG 8
+A CKVCG
Sbjct: 173 DAVCKVCG 180


>sp|DNAJ_METAC|CHAPERONE protein DnaJ|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 APCKVCG 8
+PC VCG
Sbjct: 199 SPCPVCG 205


>sp|PUS10_AERPE|TRNA pseudouridine synthase Pus10|Aeropyrum pernix (strain ATCC 700893

Query: 2 APCKVCG 8
PC VCG
Sbjct: 93 GPCAVCG 99


>sp|RF1_METMA|PEPTIDE chain release factor subunit|Methanosarcina mazei (strain ATCC

Query: 4 CKVCGY 9
C VCGY
Sbjct: 330 CSVCGY 335


>sp|RF11_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 4 CKVCGY 9
C VCGY
Sbjct: 330 CSVCGY 335


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 NAPCKVCG 8
+A CKVCG
Sbjct: 171 DAICKVCG 178


>sp|Y931_METLZ|UPF0212 protein Mlab_0931|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 NAPCKVCG 8
N PC CG
Sbjct: 48 NMPCPYCG 55


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 3 PCKVCG 8
PCK CG
Sbjct: 89 PCKKCG 94


>sp|Y1230_METJA|UNCHARACTERIZED protein MJ1230|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CKVCGYS 10
CK CGYS
Sbjct: 47 CKKCGYS 53


>sp|GUAAA_METVS|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus vannielii

Query: 4 CKVCGY 9
CKVCG+
Sbjct: 180 CKVCGF 185


>sp|IF5A_HALMA|TRANSLATION initiation factor 5A|Haloarcula marismortui (strain ATCC 43049

Query: 1 NAPCKVCGYS 10
+ PCK+ YS
Sbjct: 21 DTPCKINSYS 30


>sp|PUS10_METTM|TRNA pseudouridine synthase Pus10|Methanothermobacter marburgensis

Query: 2 APCKVCG 8
PC VCG
Sbjct: 53 GPCLVCG 59


>sp|TIAS_THESM|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus sibiricus (strain

Query: 4 CKVCGY 9
CK CGY
Sbjct: 373 CKKCGY 378


>sp|ACDG_METJA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanocaldococcus

Query: 4 CKVCGY 9
CK CGY
Sbjct: 19 CKKCGY 24


>sp|SYP_METB6|PROLINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 NAPCKVCG 8
+ PC +CG
Sbjct: 459 DGPCIICG 466


>sp|SYP_METLZ|PROLINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 APCKVCG 8
PC VCG
Sbjct: 459 GPCIVCG 465


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NAPCKVCG 8
NA C +CG
Sbjct: 170 NAKCALCG 177


>sp|TIAS_THEGJ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus gammatolerans

Query: 4 CKVCGY 9
CK CGY
Sbjct: 372 CKRCGY 377


>sp|TIAS_PYRHO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrococcus horikoshii (strain

Query: 4 CKVCGY 9
CK CGY
Sbjct: 372 CKRCGY 377


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 CKVCG 8
CKVCG
Sbjct: 174 CKVCG 178


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 CKVCG 8
CKVCG
Sbjct: 20 CKVCG 24


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 CKVCG 8
CKVCG
Sbjct: 20 CKVCG 24


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 CKVCG 8
CKVCG
Sbjct: 20 CKVCG 24


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 CKVCG 8
CKVCG
Sbjct: 20 CKVCG 24


>sp|FDHD_SULTO|SULFUR carrier protein FdhD|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NAPCKVCG 8
N+ C VCG
Sbjct: 100 NSSCGVCG 107


>sp|FDHD_SACS2|SULFUR carrier protein FdhD|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NAPCKVCG 8
N+ C VCG
Sbjct: 102 NSSCGVCG 109


>sp|FDHD_PICTO|SULFUR carrier protein FdhD|Picrophilus torridus (strain ATCC 700027

Query: 1 NAPCKVCG 8
N+ C VCG
Sbjct: 102 NSSCGVCG 109


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 NAPCKVCG 8
N C VCG
Sbjct: 1321 NGKCPVCG 1328


>sp|RUBH_METTH|PUTATIVE rubredoxin|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 CKVCGY 9
C++CGY
Sbjct: 4 CRICGY 9


>sp|RUBR_PYRFU|RUBREDOXIN furiosus (strain ATCC 43587

Query: 4 CKVCGY 9
CK+CGY
Sbjct: 6 CKICGY 11


>sp|KITH_PYRAE|THYMIDINE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 NAPCKVCG 8
+A CK+CG
Sbjct: 136 SAVCKLCG 143


>sp|TIAS_IGNH4|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignicoccus hospitalis (strain

Query: 4 CKVCGY 9
CK CGY
Sbjct: 333 CKKCGY 338


>sp|SYM_METBU|METHIONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 APCKVCG 8
AP K+CG
Sbjct: 645 APAKLCG 651


>sp|TFE_THEPD|TRANSCRIPTION factor E|Thermofilum pendens (strain DSM 2475

Query: 1 NAPCKVCG 8
N C+VCG
Sbjct: 131 NYTCEVCG 138


>sp|SYM_METAR|METHIONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 4 CKVCG 8
CKVCG
Sbjct: 184 CKVCG 188


>sp|SYM_ARCFU|METHIONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 CKVCG 8
CK+CG
Sbjct: 170 CKICG 174


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 NAPCKVCGYS 10
N C VCG S
Sbjct: 413 NHACPVCGGS 422


Query: 3 PCKVC 7
PC+VC
Sbjct: 770 PCEVC 774


>sp|RUBR_METTH|PROBABLE rubredoxin|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 CKVCGY 9
C+VCGY
Sbjct: 16 CRVCGY 21


>sp|PUS10_CALMQ|TRNA pseudouridine synthase Pus10|Caldivirga maquilingensis (strain

Query: 3 PCKVCG 8
PC +CG
Sbjct: 88 PCFICG 93


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 CKVCG 8
CK+CG
Sbjct: 174 CKICG 178


>sp|GUAAA_META3|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus aeolicus

Query: 4 CKVCG 8
CKVCG
Sbjct: 180 CKVCG 184


>sp|DEOC_METAR|DEOXYRIBOSE-PHOSPHATE aldolase|Methanocella arvoryzae (strain DSM 22066

Query: 1 NAPCKVC 7
N+P KVC
Sbjct: 57 NSPVKVC 63


>sp|ACYP_METHJ|ACYLPHOSPHATASE hungatei JF-1 (strain ATCC

Query: 5 KVCGYS 10
+VCGYS
Sbjct: 79 EVCGYS 84


>sp|SRP19_METM7|SIGNAL recognition particle 19 kDa|Methanococcus maripaludis (strain C7

Query: 3 PCKVCGY 9
P ++CGY
Sbjct: 60 PWEICGY 66


>sp|SYP_METMJ|PROLINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 NAPCKVCG 8
+ PC CG
Sbjct: 458 DGPCVACG 465


>sp|ISF2_ARCFU|IRON-SULFUR flavoprotein AF_1519|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 APCKVCGY 9
+PC+ C Y
Sbjct: 43 SPCQHCDY 50


>sp|SYK_METJA|LYSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CKVCGY 9
C++CG+
Sbjct: 195 CEICGF 200


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 4 CKVCGY 9
C+VCG+
Sbjct: 156 CEVCGH 161


Query: 1 NAPCKVCG 8
N C +CG
Sbjct: 170 NPRCNICG 177


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 CKVCGY 9
C+VCG+
Sbjct: 156 CEVCGH 161


Query: 1 NAPCKVCG 8
N C +CG
Sbjct: 170 NPRCNICG 177


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PCKVCG 8
P KVCG
Sbjct: 520 PVKVCG 525


>sp|Y182_METKA|PUTATIVE ABC transporter ATP-binding protein|Methanopyrus kandleri (strain

Query: 1 NAPCKVCGYS 10
+ C VCG S
Sbjct: 7 DGTCAVCGLS 16


>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NAPCKVCG 8
N C +CG
Sbjct: 170 NPKCSICG 177


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 NAPCKVCG 8
N C +CG
Sbjct: 170 NPKCSICG 177


>sp|SRP19_METVS|SIGNAL recognition particle 19 kDa|Methanococcus vannielii (strain ATCC

Query: 3 PCKVCGY 9
P ++CGY
Sbjct: 60 PWEICGY 66


>sp|Y2663_HALWD|UPF0212 protein HQ_2663A|Haloquadratum walsbyi (strain DSM 16790

Query: 3 PCKVCG 8
PC CG
Sbjct: 51 PCPACG 56


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 CKVCGY 9
CK CG+
Sbjct: 15 CKTCGH 20


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 CKVCG 8
C+VCG
Sbjct: 23 CRVCG 27


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 4 CKVCG 8
C+VCG
Sbjct: 23 CRVCG 27


>sp|RUBR_PYRAB|RUBREDOXIN abyssi (strain GE5 /

Query: 4 CKVCGY 9
CK+CGY
Sbjct: 6 CKICGY 11


>sp|GVPC1_HALSA|GAS vesicle protein C1|Halobacterium salinarum (strain ATCC 700922

Query: 4 CKVCG 8
C+VCG
Sbjct: 341 CRVCG 345


>sp|CBID_METKA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 3 PCKVCGY 9
PC V GY
Sbjct: 231 PCLVTGY 237


>sp|CSL4_SACS2|EXOSOME complex component Csl4|Saccharolobus solfataricus (strain ATCC

Query: 2 APCKVCGY 9
A C CGY
Sbjct: 149 ARCSRCGY 156


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 NAPCKVCG 8
N C +CG
Sbjct: 170 NPKCAICG 177


>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 NAPCKVCG 8
N C +CG
Sbjct: 183 NPKCAICG 190


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 4 CKVCG 8
CK+CG
Sbjct: 174 CKICG 178


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 2 APCKVCG 8
A C VCG
Sbjct: 387 AECPVCG 393


>sp|THIE_THEVO|THIAMINE-PHOSPHATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 KVCGYS 10
K CGYS
Sbjct: 171 KFCGYS 176


>sp|HPRT_METHJ|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 4 CKVCGYS 10
C+V GYS
Sbjct: 97 CQVTGYS 103


>sp|RUBR1_METJA|PROBABLE Rubredoxin-1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CKVCGY 9
CKVCG+
Sbjct: 24 CKVCGW 29


>sp|SRP19_METM6|SIGNAL recognition particle 19 kDa|Methanococcus maripaludis (strain C6

Query: 3 PCKVCGY 9
P ++CGY
Sbjct: 60 PWEICGY 66


>sp|SRP19_METM5|SIGNAL recognition particle 19 kDa|Methanococcus maripaludis (strain C5

Query: 3 PCKVCGY 9
P ++CGY
Sbjct: 60 PWEICGY 66


>sp|ILVD_METM5|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C5 /

Query: 5 KVCGYS 10
K CGYS
Sbjct: 20 KACGYS 25


>sp|TIAS_SACI2|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Saccharolobus islandicus

Query: 1 NAPCKVCG 8
N C +CG
Sbjct: 352 NPKCPICG 359


>sp|Y1154_METJA|UNCHARACTERIZED protein MJ1154|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 KVCGYS 10
++CGYS
Sbjct: 94 EICGYS 99


>sp|RAD50_AERPE|DNA double-strand break repair Rad50|Aeropyrum pernix (strain ATCC

Query: 1 NAPCKVCG 8
+A C VCG
Sbjct: 461 SARCPVCG 468


>sp|ILVD_METM7|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C7 /

Query: 5 KVCGYS 10
K CGYS
Sbjct: 20 KACGYS 25


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 NAPCKVCG 8
N C +CG
Sbjct: 170 NPRCSICG 177


>sp|ILVD_METM6|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C6 /

Query: 5 KVCGYS 10
K CGYS
Sbjct: 20 KACGYS 25


>sp|RF1_METJA|PEPTIDE chain release factor subunit|Methanocaldococcus jannaschii (strain

Query: 1 NAPCKVCG 8
NA C CG
Sbjct: 358 NAQCPKCG 365


>sp|Y1595_METJA|UPF0104 membrane protein MJ1595|Methanocaldococcus jannaschii (strain ATCC

Query: 4 CKVCGYS 10
CK C Y+
Sbjct: 191 CKYCSYN 197


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 3 PCKVC 7
PCK C
Sbjct: 518 PCKTC 522




569|SequenceR|2850|2841|LYEMNNAPCK

>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LYEMNNAP 8
YE+ NAP
Sbjct: 494 FYEIKNAP 501


>sp|ATGT_ARCFU|TRNA-GUANINE(15) transglycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LYEMNNAPCK 10
L E+N PCK
Sbjct: 265 LSELNYFPCK 274




570|SequenceR|2855|2846|ISVGVLYEMN

>sp|AKSA_METTH|HOMOCITRATE synthase AksA|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 SVGVLYEMN 10
++GVLYE++
Sbjct: 266 NIGVLYELS 274


>sp|LEUC_METS5|3-ISOPROPYLMALATE dehydratase large subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 ISVGVLYEM 9
I+VG+L+E+
Sbjct: 96 INVGILHEL 104




571|SequenceR|2860|2851|FSSMKISVGV

>sp|GCH3_SULTO|GTP cyclohydrolase III|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FSSMKISVGV 10
F +MK+ +G+
Sbjct: 183 FPNMKVGIGI 192


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FSSMKISVGV 10
FSS K+ VG+
Sbjct: 958 FSSPKVLVGI 967




572|SequenceR|2865|2856|IRSLNFSSMK

***** No hits found ******


573|SequenceR|2870|2861|PTLTVIRSLN

>sp|NAC_PYRFU|NASCENT polypeptide-associated complex protein|Pyrococcus furiosus

Query: 1 PTLTVIRSL 9
PT+TVI+++
Sbjct: 41 PTVTVIKAM 49


>sp|DHQS_METPE|3-DEHYDROQUINATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 TLTVIRSL 9
TLTV+R L
Sbjct: 155 TLTVVRQL 162




574|SequenceR|2875|2866|AITCFPTLTV

***** No hits found ******


575|SequenceR|2880|2871|LSSKNAITCF

>sp|DTDA_STAMF|D-AMINOACYL-TRNA deacylase|Staphylothermus marinus (strain ATCC 43588

Query: 4 KNAITCF 10
KNAITC+
Sbjct: 35 KNAITCY 41


>sp|PYRK_METBF|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanosarcina barkeri

Query: 1 LSSKNAIT 8
LSSKN+IT
Sbjct: 50 LSSKNSIT 57


>sp|SYT_METHJ|THREONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 KNAITCF 10
+NA+TCF
Sbjct: 345 ENALTCF 351


>sp|ACD1_ARCFU|ACETATE--COA ligase [ADP-forming] I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 KNAITCF 10
KNA+ CF
Sbjct: 392 KNAVCCF 398




576|SequenceR|2885|2876|GVELELSSKN

>sp|PGP_METMJ|PHOSPHOGLYCOLATE phosphatase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GVELELSS 8
GVELEL S
Sbjct: 102 GVELELYS 109


>sp|PRIL_PYRHO|DNA primase large subunit PriL|Pyrococcus horikoshii (strain ATCC

Query: 1 GVELELSSK 9
G+ELEL K
Sbjct: 76 GIELELVKK 84




577|SequenceR|2890|2881|DSAIEGVELE

>sp|RBL_PYRFU|RIBULOSE bisphosphate carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DSAIEGVELE 10
D+A+EGV+LE
Sbjct: 389 DAALEGVDLE 398


>sp|RBL_PYRAB|RIBULOSE bisphosphate carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 DSAIEGVELE 10
D+AIEG++LE
Sbjct: 393 DAAIEGLDLE 402


>sp|RBL_PYRHO|RIBULOSE bisphosphate carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DSAIEGVELE 10
D+AIEGV+L+
Sbjct: 394 DAAIEGVDLD 403


>sp|ARCH_AERPE|PROTEIN archease|Aeropyrum pernix (strain ATCC 700893

Query: 1 DSAIEGVELE 10
D++IEG++LE
Sbjct: 52 DASIEGIDLE 61


>sp|HJC_SACI5|CROSSOVER junction endodeoxyribonuclease Hjc|Saccharolobus islandicus (strain

Query: 1 DSAIEGVELE 10
DS IEG++LE
Sbjct: 116 DSEIEGLDLE 125


>sp|HJC_SACS2|CROSSOVER junction endodeoxyribonuclease Hjc|Saccharolobus solfataricus

Query: 1 DSAIEGVELE 10
DS IEG++LE
Sbjct: 116 DSEIEGLDLE 125


>sp|APGM_AERPE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Aeropyrum pernix (strain ATCC 700893

Query: 2 SAIEGVELE 10
SA++G+ELE
Sbjct: 124 SAVDGMELE 132


>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SAIEGVEL 9
SA+EGVE+
Sbjct: 390 SAVEGVEV 397




578|SequenceR|2895|2886|TPMSGDSAIE

>sp|Y1016_METJA|UNCHARACTERIZED protein MJ1016|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 MSGDSAIE 10
M+GDSA+E
Sbjct: 137 MTGDSALE 144


>sp|Y410_METJA|UNCHARACTERIZED ATP-binding protein MJ0410|Methanocaldococcus jannaschii (strain

Query: 1 TPMSGDSAIE 10
T ++GDSAIE
Sbjct: 58 TYLAGDSAIE 67


>sp|RL6_NATPD|LARGE ribosomal subunit protein uL6|Natronomonas pharaonis (strain ATCC

Query: 1 TPMSGDSAIE 10
TP+ GD+++E
Sbjct: 116 TPVRGDTSVE 125


>sp|Y231_METJA|UNCHARACTERIZED protein MJ0231|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PMSGDSAIE 10
P++GD A+E
Sbjct: 352 PITGDFAVE 360


>sp|SPEE_PYRNV|POLYAMINE aminopropyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PMSGDSAI 9
P+SG+SA+
Sbjct: 13 PLSGNSAL 20


>sp|FLAB1_METVO|FLAGELLIN B1|Methanococcus voltae

Query: 1 TPMSGDSAIE 10
TP +G SAI+
Sbjct: 86 TPKAGSSAID 95


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 3 MSGDSAIE 10
+SGD+AIE
Sbjct: 723 VSGDAAIE 730


>sp|NDK_HYPBU|NUCLEOSIDE diphosphate kinase|Hyperthermus butylicus (strain DSM 5456

Query: 3 MSGDSAIE 10
+ GDSAIE
Sbjct: 77 LEGDSAIE 84


>sp|WECC_PYRHO|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TPMSGD 6
TP+SGD
Sbjct: 85 TPLSGD 90




579|SequenceR|2900|2891|YNWKNTPMSG

>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 WKNTPMSG 10
WK PM+G
Sbjct: 550 WKEIPMTG 557


>sp|PYRH_IGNH4|URIDYLATE kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 YNWKNTP 7
++WKN P
Sbjct: 168 FDWKNEP 174


>sp|SYR_HALWD|ARGININE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 YNWKNTPMSG 10
Y+W N P G
Sbjct: 375 YSWVNLPEGG 384


>sp|SYR_HALMA|ARGININE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 YNWKNTPMSG 10
Y+W N P G
Sbjct: 369 YSWVNLPEGG 378


>sp|MALF_THELN|TREHALOSE/MALTOSE transport system permease protein|Thermococcus litoralis (strain

Query: 2 NWKNTPMSG 10
NW TP+S
Sbjct: 153 NWLGTPISA 161


>sp|SYT_METTH|THREONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 WKNTPMS 9
WKN P S
Sbjct: 299 WKNLPAS 305


>sp|RS4E_THEVO|SMALL ribosomal subunit protein eS4|Thermoplasma volcanium (strain ATCC

Query: 1 YNWKNTPMSG 10
Y W TP+ G
Sbjct: 21 YFWGPTPLPG 30


>sp|KGSDH_HALVD|ALPHA-KETOGLUTARATE semialdehyde dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 3 WKNTP 7
W+NTP
Sbjct: 59 WRNTP 63


>sp|RL3_METKA|LARGE ribosomal subunit protein uL3|Methanopyrus kandleri (strain AV19

Query: 2 NWKNTPMSG 10
+W N+P G
Sbjct: 61 DWPNSPTEG 69


>sp|SFSA_METS3|SUGAR fermentation stimulation protein homolog|Methanobrevibacter smithii

Query: 2 NWKNTP 7
NW+N P
Sbjct: 192 NWENDP 197


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NWKNTPM 8
NW TP+
Sbjct: 64 NWTKTPL 70


>sp|GLNA_ARCFU|GLUTAMINE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WKNTPMSG 10
WK P SG
Sbjct: 293 WKGEPFSG 300


>sp|RL3_SACS2|LARGE ribosomal subunit protein uL3|Saccharolobus solfataricus (strain

Query: 2 NWKNTPMSG 10
+W N+P +G
Sbjct: 60 DWPNSPTNG 68


>sp|RL3_SACI7|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 2 NWKNTPMSG 10
+W N+P +G
Sbjct: 60 DWPNSPTNG 68


>sp|RL3_SACI6|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 2 NWKNTPMSG 10
+W N+P +G
Sbjct: 60 DWPNSPTNG 68


>sp|RL3_SACI4|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 2 NWKNTPMSG 10
+W N+P +G
Sbjct: 60 DWPNSPTNG 68


>sp|RL3_SACI3|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 2 NWKNTPMSG 10
+W N+P +G
Sbjct: 60 DWPNSPTNG 68


>sp|RL3_SACI2|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 2 NWKNTPMSG 10
+W N+P +G
Sbjct: 60 DWPNSPTNG 68


>sp|RL3_SACI1|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 2 NWKNTPMSG 10
+W N+P +G
Sbjct: 60 DWPNSPTNG 68


>sp|MPTN_METJA|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NWKNTPMSG 10
NWKN G
Sbjct: 208 NWKNNVSQG 216


>sp|DPCKG_CALMQ|GTP-DEPENDENT dephospho-CoA kinase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 YNWKNT 6
Y WKN+
Sbjct: 195 YGWKNS 200




580|SequenceR|2905|2896|ESSAIYNWKN

>sp|SYR_METAC|ARGININE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ESSAIYNWK 9
E S ++NWK
Sbjct: 426 EKSTVFNWK 434


>sp|SYR_METMA|ARGININE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ESSAIYNWK 9
E S ++NWK
Sbjct: 428 EKSTVFNWK 436


>sp|TRUB_SULTO|PROBABLE tRNA pseudouridine synthase B|Sulfurisphaera tokodaii (strain DSM

Query: 2 SSAIYNWKN 10
S A+Y WKN
Sbjct: 221 SEALYMWKN 229


>sp|SYR_METBF|ARGININE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ESSAIYNWK 9
E S ++NWK
Sbjct: 428 EKSTVFNWK 436


>sp|EF2_METTP|ELONGATION factor 2|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 SAIYNW 8
SA+YNW
Sbjct: 204 SALYNW 209


>sp|EF2_METTE|ELONGATION factor 2|Methanosarcina thermophila

Query: 3 SAIYNW 8
SA+YNW
Sbjct: 204 SALYNW 209


>sp|EF2_METPE|ELONGATION factor 2|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 SAIYNW 8
SA+YNW
Sbjct: 204 SALYNW 209


>sp|EF2_METMT|ELONGATION factor 2|Methanococcoides methylutens

Query: 3 SAIYNW 8
SA+YNW
Sbjct: 204 SALYNW 209


>sp|EF2_METMJ|ELONGATION factor 2|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 SAIYNW 8
SA+YNW
Sbjct: 204 SALYNW 209


>sp|EF2_METMA|ELONGATION factor 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 SAIYNW 8
SA+YNW
Sbjct: 204 SALYNW 209


>sp|EF2_METBU|ELONGATION factor 2|Methanococcoides burtonii (strain DSM 6242

Query: 3 SAIYNW 8
SA+YNW
Sbjct: 204 SALYNW 209


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 3 SAIYNW 8
SA+YNW
Sbjct: 204 SALYNW 209


>sp|EF2_METB6|ELONGATION factor 2|Methanoregula boonei (strain DSM 21154

Query: 3 SAIYNW 8
SA+YNW
Sbjct: 204 SALYNW 209


>sp|EF2_METAC|ELONGATION factor 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 SAIYNW 8
SA+YNW
Sbjct: 204 SALYNW 209


>sp|EF2_ARCFU|ELONGATION factor 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SAIYNW 8
SA+YNW
Sbjct: 202 SALYNW 207


>sp|Y2001_METTM|UNCHARACTERIZED protein MTBMA_p00010|Methanothermobacter marburgensis (strain ATCC

Query: 3 SAIYNWKN 10
S IY W N
Sbjct: 486 STIYRWVN 493




581|SequenceR|2910|2901|WFPLCESSAI

>sp|ASPD_METKA|L-ASPARTATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 WFPLCESS 8
WFP C++S
Sbjct: 50 WFPDCDTS 57


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 WFPLCESS 8
W P CE+S
Sbjct: 180 WCPRCETS 187


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 WFPLCESS 8
W P CE+S
Sbjct: 181 WCPRCETS 188


>sp|HYPF_METJA|PROBABLE carbamoyltransferase HypF|Methanocaldococcus jannaschii (strain

Query: 2 FPLCE 6
FPLCE
Sbjct: 164 FPLCE 168


>sp|PYLC_METAC|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PLCESSAI 10
P CESS++
Sbjct: 132 PPCESSSV 139


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 180 WCPRCETT 187


>sp|PYLC_METBF|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PLCESSAI 10
P CESS++
Sbjct: 132 PPCESSSV 139


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 180 WCPRCETA 187


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 183 WCPRCETT 190


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 183 WCPRCETT 190


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 120 WCPRCETT 127


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 214 WCPKCETA 221


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 183 WCPRCETA 190


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 183 WCPRCETA 190


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 183 WCPRCETA 190


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 188 WCPKCETA 195


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 181 WCPRCETA 188


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 205 WCPKCETA 212


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 188 WCPRCETT 195


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 172 WCPRCETA 179


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 181 WCPRCETA 188


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 181 WCPRCETA 188


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 180 WCPRCETA 187


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 181 WCPRCETA 188


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 181 WCPRCETA 188


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 180 WCPRCETA 187


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 175 WCPRCETA 182


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 183 WCPRCETA 190


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 190 WCPRCETA 197


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 183 WCPRCETA 190


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 180 WCPRCETA 187


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 185 WCPRCETA 192


>sp|SYV_HALSA|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 174 WCPRCETA 181


>sp|SYV_HALS3|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 174 WCPRCETA 181


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 176 WCPRCETA 183


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 WFPLCESS 8
W P CE++
Sbjct: 176 WCPRCETA 183




582|SequenceR|2915|2906|SLSEPWFPLC

>sp|FLAK_METVO|PREFLAGELLIN peptidase|Methanococcus voltae

Query: 5 PWFPL 9
PWFPL
Sbjct: 111 PWFPL 115


>sp|Y906_METJA|UNCHARACTERIZED protein MJ0906|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LSEPWFPLC 10
LS P++ LC
Sbjct: 182 LSSPYYSLC 190


>sp|ASPD_METKA|L-ASPARTATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 4 EPWFPLC 10
E WFP C
Sbjct: 48 ERWFPDC 54


>sp|KHSE_PYRFU|HOMOSERINE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 PWFP 8
PWFP
Sbjct: 227 PWFP 230


>sp|NDK_METB6|NUCLEOSIDE diphosphate kinase|Methanoregula boonei (strain DSM 21154

Query: 2 LSEPWFP 8
LS+P+FP
Sbjct: 53 LSKPFFP 59


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 PWFPL 9
PW+PL
Sbjct: 623 PWYPL 627


>sp|Y1674_METAR|UPF0280 protein UNCMA_16740|Methanocella arvoryzae (strain DSM 22066

Query: 4 EPWFPLC 10
EP+ P+C
Sbjct: 27 EPYHPVC 33


>sp|SPT4_PYRFU|TRANSCRIPTION elongation factor Spt4|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LSEPWFPL 9
LSE WF L
Sbjct: 26 LSEEWFDL 33


>sp|DGGGP_THEPD|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermofilum pendens (strain DSM 2475

Query: 1 SLSEPWFPL 9
++S+PW PL
Sbjct: 74 AISKPWRPL 82


>sp|IPYR_METTH|INORGANIC pyrophosphatase|Methanothermobacter thermautotrophicus (strain

Query: 2 LSEPWFPLC 10
+ EP FP C
Sbjct: 76 MDEPTFPGC 84


>sp|SYK_METMP|LYSINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LSEPWFPL 9
L++ W+PL
Sbjct: 160 LADDWYPL 167


>sp|SYK_METMI|LYSINE--TRNA ligase|Methanococcus maripaludis (Methanococcus deltae)

Query: 2 LSEPWFPL 9
L++ W+PL
Sbjct: 160 LADNWYPL 167


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 LSEPWFP 8
LSE W P
Sbjct: 162 LSEDWLP 168




583|SequenceR|2920|2911|VCLKGSLSEP

>sp|DGGGP_KORCO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 VCLKGSLSE 9
+CLKG L E
Sbjct: 245 ICLKGKLEE 253


>sp|LYSY_CALMQ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 LKGSLSEP 10
L GS+SEP
Sbjct: 253 LSGSISEP 260


>sp|GATD_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanobrevibacter smithii (strain ATCC

Query: 1 VCLKGSLSE 9
VC+ GSL++
Sbjct: 233 VCMHGSLND 241


>sp|Y749_METJA|UNCHARACTERIZED protein MJ0749|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VCLKGSLS 8
VC KG+LS
Sbjct: 228 VCKKGALS 235


>sp|GSA_METLZ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 CLKGSLSEP 10
CL G +S P
Sbjct: 13 CLPGGVSSP 21




584|SequenceR|2925|2916|CGVVRVCLKG

>sp|GLCDH_SACSO|GLUCOSE 1-dehydrogenase|Saccharolobus solfataricus (Sulfolobus

Query: 1 CGVVRVCLKG 10
CG+ R CL G
Sbjct: 93 CGICRNCLVG 102


>sp|GLCD1_SACS2|GLUCOSE 1-dehydrogenase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 CGVVRVCLKG 10
CG+ R CL G
Sbjct: 93 CGICRNCLVG 102


>sp|TRPF_PYRAE|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 CGVVRV 6
CGVVRV
Sbjct: 7 CGVVRV 12


>sp|CARA_METJA|CARBAMOYL phosphate synthase small chain|Methanocaldococcus jannaschii

Query: 2 GVVRVCLK 9
GVV+ CLK
Sbjct: 116 GVVKSCLK 123


>sp|RS5_METKA|SMALL ribosomal subunit protein uS5|Methanopyrus kandleri (strain AV19 /

Query: 1 CGVVRVCLK 9
CG VR+ LK
Sbjct: 139 CGSVRITLK 147


>sp|COFH_METKA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanopyrus kandleri (strain AV19 /

Query: 2 GVVRVCLKG 10
G VCL+G
Sbjct: 107 GATEVCLQG 115


>sp|Y087_METJA|PUTATIVE ABC transporter permease protein|Methanocaldococcus jannaschii

Query: 3 VVRVCLKG 10
+VR+C+ G
Sbjct: 284 IVRICIGG 291


>sp|SPEH_METM6|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus maripaludis (strain C6 /

Query: 1 CGVVRVCLK 9
CG +C+K
Sbjct: 37 CGATLICVK 45


>sp|SPEH_METM5|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus maripaludis (strain C5 /

Query: 1 CGVVRVCLK 9
CG +C+K
Sbjct: 37 CGATLICVK 45


>sp|SPEH_METMP|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus maripaludis (strain DSM

Query: 1 CGVVRVCLK 9
CG +C+K
Sbjct: 37 CGATLICVK 45


>sp|SPEH_METM7|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus maripaludis (strain C7 /

Query: 1 CGVVRVCLK 9
CG +C+K
Sbjct: 37 CGATLICVK 45




585|SequenceR|2930|2921|KSSGECGVVR

>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 KSSGECGVVR 10
KS+GE G+++
Sbjct: 708 KSTGEIGIIK 717


>sp|HEM2_METJA|DELTA-AMINOLEVULINIC acid dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SSGECGVVR 10
S G CG+V+
Sbjct: 135 SHGHCGIVK 143


>sp|HEM2_ARCFU|DELTA-AMINOLEVULINIC acid dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SSGECGVVR 10
+ G CGVV+
Sbjct: 126 THGHCGVVK 134


>sp|GSA_METLZ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 SGECGVVR 10
+G+CG+V+
Sbjct: 126 TGKCGIVK 133


>sp|HEM2_METTH|DELTA-AMINOLEVULINIC acid dehydratase|Methanothermobacter thermautotrophicus (strain

Query: 2 SSGECGVV 9
S G CG+V
Sbjct: 131 SHGHCGIV 138


>sp|HEM2_METSC|DELTA-AMINOLEVULINIC acid dehydratase|Methanothermus sociabilis

Query: 4 GECGVVR 10
G CG+V+
Sbjct: 127 GHCGIVK 133


>sp|KDGK_SULTO|2-DEHYDRO-3-DEOXYGLUCONOKINASE tokodaii (strain DSM 16993

Query: 1 KSSGECGVV 9
K ECG++
Sbjct: 45 KQGNECGII 53


>sp|TF2B4_HALSA|TRANSCRIPTION initiation factor IIB 4|Halobacterium salinarum (strain ATCC

Query: 4 GECGVV 9
GECG+V
Sbjct: 51 GECGLV 56




586|SequenceR|2935|2926|NYFFPKSSGE

>sp|TRPD_THEAC|ANTHRANILATE phosphoribosyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 2 YFFPKSSGE 10
Y FPKS+GE
Sbjct: 120 YAFPKSTGE 128


>sp|THII_METS3|PROBABLE tRNA sulfurtransferase|Methanobrevibacter smithii (strain ATCC

Query: 2 YFFPKSSGE 10
Y FPK+ GE
Sbjct: 48 YIFPKNYGE 56


>sp|RGYRA_NANEQ|REVERSE gyrase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 YFFPKSSGE 10
YF+P+ GE
Sbjct: 380 YFYPRHWGE 388


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 YFFPKSSGE 10
YF+P+ G+
Sbjct: 540 YFYPEGGGQ 548


>sp|CCA_SULTO|CCA-ADDING enzyme|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 FFPKSSGE 10
FFPKS G+
Sbjct: 60 FFPKSVGK 67


>sp|CHEB_NATPD|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Natronomonas pharaonis

Query: 3 FFPKSSGE 10
FF K SGE
Sbjct: 105 FFKKPSGE 112


>sp|TOP6B_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 2 YFFPKSS 8
Y+FP+S+
Sbjct: 239 YYFPRST 245


>sp|Y1514_METJA|PUTATIVE gamma-glutamylcyclotransferase MJ1514|Methanocaldococcus jannaschii

Query: 2 YFFPKSSG 9
YF+P+S G
Sbjct: 100 YFYPESCG 107


>sp|PURP_PYRHO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus horikoshii (strain ATCC

Query: 1 NYFFPKSSGE 10
+YF+ K +GE
Sbjct: 183 HYFYSKITGE 192


>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NYFFPKSSGE 10
+Y+F SGE
Sbjct: 93 SYYFDPDSGE 102




587|SequenceR|2940|2931|GNDQRNYFFP

>sp|GATB_ARCFU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Archaeoglobus fulgidus (strain ATCC

Query: 3 DQRNYFFP 10
D++NYF+P
Sbjct: 78 DRKNYFYP 85


>sp|CAS3_METTH|CRISPR-ASSOCIATED nuclease/helicase Cas3|Methanothermobacter thermautotrophicus

Query: 2 NDQRNYFF 9
NDQRNY
Sbjct: 15 NDQRNYLL 22


>sp|GATB_METMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina mazei (strain ATCC

Query: 4 QRNYFFP 10
++NYF+P
Sbjct: 84 RKNYFYP 90


>sp|GATB_METHJ|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanospirillum hungatei JF-1 (strain

Query: 4 QRNYFFP 10
++NYF+P
Sbjct: 80 RKNYFYP 86


>sp|GATB_METBF|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina barkeri (strain Fusaro

Query: 4 QRNYFFP 10
++NYF+P
Sbjct: 84 RKNYFYP 90


>sp|GATB_METAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina acetivorans (strain

Query: 4 QRNYFFP 10
++NYF+P
Sbjct: 84 RKNYFYP 90


>sp|GATB_HALSA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Halobacterium salinarum (strain ATCC

Query: 4 QRNYFFP 10
++NYF+P
Sbjct: 86 RKNYFYP 92


>sp|GATB_METB6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanoregula boonei (strain DSM 21154

Query: 4 QRNYFFP 10
++NYF+P
Sbjct: 80 RKNYFYP 86


>sp|GLMS_PYRHO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus horikoshii (strain ATCC

Query: 2 NDQRNYFF 9
ND+R++F+
Sbjct: 454 NDKRDFFY 461


>sp|SYM_SULTO|METHIONINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GNDQRNYFF 9
GND ++Y+F
Sbjct: 283 GNDVKSYYF 291


>sp|GLMS_PYRAB|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus abyssi (strain GE5 /

Query: 2 NDQRNYFF 9
ND+R++F+
Sbjct: 454 NDRRDFFY 461


>sp|SYM_METTH|METHIONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 DQRNYFF 9
D R+YFF
Sbjct: 184 DSRHYFF 190


>sp|SYM_ARCFU|METHIONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 QRNYFF 9
QR+YFF
Sbjct: 182 QRHYFF 187


>sp|SYFB_SULAC|PHENYLALANINE--TRNA ligase beta subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 NDQRNYFFP 10
ND+ + FFP
Sbjct: 47 NDRPDLFFP 55


>sp|RFCS_SULAC|REPLICATION factor C small subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 GNDQRNYFF 9
GN+ R YF
Sbjct: 64 GNNYRQYFL 72


>sp|MPTA_METMA|GTP cyclohydrolase MptA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GNDQRNYF 8
GN R+YF
Sbjct: 144 GNGDRDYF 151


>sp|GLYA_NITMS|SERINE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 5 RNYFFP 10
RNYF P
Sbjct: 364 RNYFHP 369


>sp|PYLC_METMA|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GNDQRNYF 8
GND NY+
Sbjct: 316 GNDYGNYY 323


>sp|IXTPA_METJA|DITP/XTP pyrophosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GNDQRNYFF 9
G D RN +F
Sbjct: 99 GKDNRNAYF 107




588|SequenceR|2945|2936|LSLLTGNDQR

>sp|DAPA_META3|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LSLLTGNDQ 9
+S+L+GND+
Sbjct: 178 ISVLSGNDE 186


>sp|PYRC_SULAC|DIHYDROOROTASE acidocaldarius (strain ATCC 33909

Query: 1 LSLLTGNDQR 10
+SLL+GN R
Sbjct: 301 VSLLSGNPSR 310


>sp|Y1808_PYRHO|PUTATIVE HTH-type transcriptional regulatory protein|Pyrococcus horikoshii

Query: 1 LSLLTGNDQR 10
+ LLTG D+R
Sbjct: 240 IELLTGIDER 249


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LSLLTGNDQR 10
L +TGND++
Sbjct: 660 LDKITGNDKK 669


>sp|Y539_THEKO|PUTATIVE HTH-type transcriptional regulatory protein|Thermococcus

Query: 1 LSLLTGNDQR 10
+ LLTG D+R
Sbjct: 237 IRLLTGIDER 246




589|SequenceR|2950|2941|GNLDELSLLT

>sp|ASPD_META3|L-ASPARTATE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GNLDELSLLT 10
G +DE+SL+T
Sbjct: 136 GRIDEVSLIT 145


>sp|IF2P_METB6|PROBABLE translation initiation factor IF-2|Methanoregula boonei (strain DSM

Query: 1 GNLDELS 7
GN+DEL+
Sbjct: 328 GNMDELA 334


>sp|Y513_METJA|UNCHARACTERIZED protein MJ0513|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GNLDELSLL 9
GNLD+L ++
Sbjct: 64 GNLDDLKVV 72


>sp|Y107_METJA|UNCHARACTERIZED protein MJ0107|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GNLDEL 6
GNLDEL
Sbjct: 248 GNLDEL 253




590|SequenceR|2955|2946|DVLIGGNLDE

>sp|THIC2_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 DVLIGGNLDE 10
D+ GGNLDE
Sbjct: 95 DLSTGGNLDE 104


>sp|SAT_AERPE|SULFATE adenylyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DVLIGGNLD 9
D+L+GG L+
Sbjct: 150 DILLGGRLE 158


>sp|RFCS_METMJ|REPLICATION factor C small subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DVLIGGNLDE 10
D+ IGG DE
Sbjct: 237 DLSIGGRFDE 246


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 5 GGNLDE 10
GGN+DE
Sbjct: 17 GGNIDE 22


>sp|THIC_THEKO|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DVLIGGNLDE 10
D+ GG+LDE
Sbjct: 96 DLSTGGDLDE 105


>sp|THIC_PYRAB|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 DVLIGGNLDE 10
D+ GG+LDE
Sbjct: 96 DLSTGGDLDE 105


>sp|THIC_METJA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DVLIGGNLDE 10
D+ GGNL+E
Sbjct: 95 DLSTGGNLEE 104


>sp|THIC1_METMA|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DVLIGGNLDE 10
D+ GG+LDE
Sbjct: 95 DLSTGGDLDE 104


>sp|THIC_IGNH4|PHOSPHOMETHYLPYRIMIDINE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 DVLIGGNLD 9
D+ GGNLD
Sbjct: 97 DLSTGGNLD 105


>sp|AATE_ARCFU|A-TYPE ATP synthase subunit E|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DVLIGGNLD 9
DV GGN+D
Sbjct: 139 DVTYGGNID 147


>sp|THIC_PYRAE|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DVLIGGNLD 9
D+ +GG+LD
Sbjct: 97 DLSVGGDLD 105


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 1 DVLIGGNLD 9
DVLIGG ++
Sbjct: 755 DVLIGGIME 763


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 DVLIGGNLD 9
D+LIGG D
Sbjct: 423 DILIGGMPD 431


>sp|PSB1_PYRHO|PROTEASOME subunit beta 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VLIGGNLDE 10
++IGG +DE
Sbjct: 105 IIIGGYVDE 113


>sp|PSB1_PYRFU|PROTEASOME subunit beta 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VLIGGNLDE 10
++IGG +DE
Sbjct: 105 IIIGGYVDE 113


>sp|LADH_METM5|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 1 DVLIGGN 7
+VLIGGN
Sbjct: 338 EVLIGGN 344


>sp|THIC1_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 IGGNLDE 10
+GG+LDE
Sbjct: 99 VGGDLDE 105


>sp|PSB1_PYRAB|PROTEASOME subunit beta 1|Pyrococcus abyssi (strain GE5 /

Query: 2 VLIGGNLDE 10
++IGG +DE
Sbjct: 105 IIIGGYVDE 113


>sp|DPHB_METST|DIPHTHINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 LIGGNLD 9
L+GGN+D
Sbjct: 38 LMGGNID 44




591|SequenceR|2960|2951|EATNVDVLIG

>sp|GFCR_METAR|TRANSCRIPTIONAL regulator GfcR|Methanocella arvoryzae (strain DSM 22066

Query: 3 TNVDVLIG 10
TNVDV++G
Sbjct: 88 TNVDVVVG 95


>sp|RSMA_METTH|PROBABLE ribosomal RNA small subunit|Methanothermobacter

Query: 1 EATNVDVLIG 10
+ NVDV++G
Sbjct: 88 QVDNVDVIVG 97


>sp|RNP3_METBU|RIBONUCLEASE P protein component 3|Methanococcoides burtonii (strain DSM 6242

Query: 1 EATNVDVLI 9
E +NVD+LI
Sbjct: 101 ENSNVDILI 109


>sp|APT_METM5|ADENINE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 EATNVDVLIG 10
E NVDV++G
Sbjct: 45 EDKNVDVIVG 54


>sp|MPTA1_METAR|GTP cyclohydrolase MptA 1|Methanocella arvoryzae (strain DSM 22066

Query: 1 EATNVDVLIG 10
+A+N DV++G
Sbjct: 10 QASNPDVMVG 19


>sp|APT_METVS|ADENINE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 1 EATNVDVLIG 10
E N+DV++G
Sbjct: 45 EDKNIDVIVG 54


>sp|Y449_METJA|UNCHARACTERIZED transporter MJ0449|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EATNVDVLIG 10
EA NVD +IG
Sbjct: 216 EALNVDKVIG 225


>sp|PURT_META3|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 1 EATNVDVLI 9
EA N D+LI
Sbjct: 83 EAINTDILI 91




592|SequenceR|2965|2956|IVTSHEATNV

>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 1 IVTSHEATN 9
I+ SH+A+N
Sbjct: 802 IILSHDASN 810


>sp|RL5_THEAC|LARGE ribosomal subunit protein uL5|Thermoplasma acidophilum (strain

Query: 1 IVTSHEATN 9
++T H+ATN
Sbjct: 34 MLTGHKATN 42


>sp|Y1511_METMJ|UPF0316 protein Memar_1511|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 IVTSHEATNV 10
I+T +ATN+
Sbjct: 106 IITQRDATNL 115




593|SequenceR|2970|2961|YDSFTIVTSH

>sp|SUMT_METJA|UROPORPHYRINOGEN-III C-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 SFTIVTSH 10
SFT+VT H
Sbjct: 139 SFTVVTGH 146


>sp|SUMT_METIV|UROPORPHYRINOGEN-III C-methyltransferase|Methanobacterium ivanovii

Query: 3 SFTIVTSH 10
SFT+VT H
Sbjct: 136 SFTVVTGH 143


>sp|GLMS_PYRAB|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus abyssi (strain GE5 /

Query: 1 YDSFTIVTSH 10
YDS I TSH
Sbjct: 29 YDSAGIATSH 38


>sp|MDH_HALVD|MALATE dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 1 YDSFTIVT 8
YDS T+VT
Sbjct: 55 YDSNTVVT 62


>sp|TRM1_THEVO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermoplasma volcanium

Query: 1 YDSFTIVTSH 10
+D+F V+SH
Sbjct: 100 HDNFQCVSSH 109


>sp|Y1281_METJA|UNCHARACTERIZED protein MJ1281|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YDSFTIVTS 9
YD +T+V+S
Sbjct: 574 YDGYTLVSS 582




594|SequenceR|2975|2966|ASGEHYDSFT

>sp|AGLE_HALVD|GLYCOSYLTRANSFERASE AglE|Haloferax volcanii (strain ATCC 29605

Query: 2 SGEHYDSFT 10
+ E YDSFT
Sbjct: 135 AAERYDSFT 143


>sp|RPO10_HALWD|DNA-DIRECTED RNA polymerase subunit Rpo10|Haloquadratum walsbyi (strain DSM

Query: 3 GEHYDSF 9
GEH+D F
Sbjct: 15 GEHWDEF 21


>sp|HEM3_NITMS|PROBABLE porphobilinogen deaminase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 ASGEHYDS 8
ASGE+YD+
Sbjct: 155 ASGENYDA 162


>sp|GUAAA_PYRHO|GMP synthase [glutamine-hydrolyzing] subunit A|Pyrococcus horikoshii

Query: 4 EHYDSF 9
EHYD F
Sbjct: 66 EHYDEF 71


>sp|GUAAA_THEKO|GMP synthase [glutamine-hydrolyzing] subunit A|Thermococcus

Query: 4 EHYDSF 9
EHYD F
Sbjct: 65 EHYDEF 70


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 SGEHYDSF 9
+GEHY F
Sbjct: 1358 AGEHYHRF 1365


>sp|COBQ_METBU|PROBABLE cobyric acid synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 GEHYD 7
GEHYD
Sbjct: 252 GEHYD 256


>sp|HJC_HALVD|CROSSOVER junction endodeoxyribonuclease Hjc|Haloferax volcanii (strain ATCC

Query: 1 ASGEHYDSFT 10
A GE ++SFT
Sbjct: 120 AEGEDFESFT 129


>sp|LYSK_PYRAE|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrobaculum aerophilum

Query: 3 GEHYDSFT 10
E YD+FT
Sbjct: 193 AERYDAFT 200


>sp|HELS_ARCFU|ATP-DEPENDENT DNA helicase Hel308|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SGEHYDSF 9
+GE Y+SF
Sbjct: 81 AGEKYESF 88


>sp|WECBH_METMP|UDP-N-ACETYLGLUCOSAMINE 2-epimerase homolog|Methanococcus maripaludis (strain DSM 14266

Query: 2 SGEHYD 7
+G+HYD
Sbjct: 34 TGQHYD 39


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 GEHYDSF 9
GE YD F
Sbjct: 10 GERYDQF 16


>sp|HERA_SULAC|DNA double-strand break repair helicase|Sulfolobus acidocaldarius

Query: 3 GEHYDS 8
GE+YDS
Sbjct: 179 GEYYDS 184


>sp|HERA_SACS2|DNA double-strand break repair helicase|Saccharolobus solfataricus

Query: 3 GEHYDS 8
GE+YDS
Sbjct: 179 GEYYDS 184


>sp|SAT_ARCFU|SULFATE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ASGEHYDSF 9
A GE+YD +
Sbjct: 324 AVGEYYDMY 332


>sp|PDXT_METB6|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanoregula boonei (strain

Query: 4 EHYDSFT 10
EH D+FT
Sbjct: 14 EHIDAFT 20


>sp|HCP_METAR|HYDROXYLAMINE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 3 GEHYDSFT 10
G YD FT
Sbjct: 55 GHEYDEFT 62


>sp|TRPG_METTH|ANTHRANILATE synthase component 2|Methanothermobacter thermautotrophicus

Query: 4 EHYDSFT 10
++YDSFT
Sbjct: 8 DNYDSFT 14


>sp|ATGT_PICTO|TRNA-GUANINE(15) transglycosylase|Picrophilus torridus (strain ATCC 700027

Query: 3 GEHYD 7
GEHYD
Sbjct: 465 GEHYD 469


>sp|TRPG_METTM|ANTHRANILATE synthase component 2|Methanothermobacter marburgensis (strain

Query: 4 EHYDSFT 10
++YDSFT
Sbjct: 9 DNYDSFT 15




595|SequenceR|2980|2971|MILAPASGEH

>sp|TRPD_METBF|ANTHRANILATE phosphoribosyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 ILAPASGE 9
IL+PASGE
Sbjct: 357 ILSPASGE 364


>sp|TRPD_METAC|ANTHRANILATE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 2 ILAPASGEH 10
+L+PASGE
Sbjct: 361 VLSPASGEK 369


>sp|TRPD_METMA|ANTHRANILATE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ILAPASGEH 10
+L+PASGE
Sbjct: 361 MLSPASGEQ 369


>sp|PTFA_HALVD|PTS system fructose-specific EIIA component|Haloferax volcanii (strain

Query: 1 MILAPASG 8
MIL PA+G
Sbjct: 105 MILVPAAG 112


>sp|ACDG_METTH|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanothermobacter

Query: 2 ILAPASGE 9
+ APASGE
Sbjct: 422 LAAPASGE 429


>sp|PYRH_METM5|URIDYLATE kinase|Methanococcus maripaludis (strain C5 /

Query: 2 ILAPASGEH 10
ILA SG+H
Sbjct: 210 ILASVSGDH 218


>sp|GCSH2_SULTO|PROBABLE glycine cleavage system H|Sulfurisphaera tokodaii (strain DSM

Query: 4 APASGE 9
APASGE
Sbjct: 80 APASGE 85




596|SequenceR|2985|2976|WPTHNMILAP

>sp|MTAD_HALWD|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 PTHNMI 7
PTHN+I
Sbjct: 386 PTHNII 391


>sp|TRUD_METBU|PROBABLE tRNA pseudouridine synthase D|Methanococcoides burtonii (strain

Query: 1 WPTHNMI 7
W TH++I
Sbjct: 60 WETHHLI 66


>sp|ADEC_STAMF|ADENINE deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 3 THNMILA 9
THN+I+A
Sbjct: 492 THNLIVA 498


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 WPTHNMIL 8
WP N+I+
Sbjct: 832 WPVQNVIV 839




597|SequenceR|2990|2981|YTLIDWPTHN

>sp|Y942_SACS2|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 1 YTLIDWPTHN 10
YT+I++P HN
Sbjct: 20 YTMIEYPEHN 29


>sp|Y1579_SACI1|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 1 YTLIDWPTHN 10
YT+I++P HN
Sbjct: 20 YTMIEYPEHN 29


>sp|Y1371_SACI2|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 1 YTLIDWPTHN 10
YT+I++P HN
Sbjct: 20 YTMIEYPEHN 29


>sp|Y1334_SACI3|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 1 YTLIDWPTHN 10
YT+I++P HN
Sbjct: 20 YTMIEYPEHN 29


>sp|Y1284_SACI4|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 1 YTLIDWPTHN 10
YT+I++P HN
Sbjct: 20 YTMIEYPEHN 29


>sp|Y1269_SACI7|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 1 YTLIDWPTHN 10
YT+I++P HN
Sbjct: 20 YTMIEYPEHN 29


>sp|Y1268_SACI6|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 1 YTLIDWPTHN 10
YT+I++P HN
Sbjct: 20 YTMIEYPEHN 29


>sp|SYDND_METAC|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YTLIDWPT 8
Y +IDWPT
Sbjct: 332 YFIIDWPT 339


>sp|SYDND_METBF|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YTLIDWPT 8
Y +IDWPT
Sbjct: 332 YFIIDWPT 339


>sp|SYDND_METMA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YTLIDWPT 8
Y +IDWPT
Sbjct: 332 YFIIDWPT 339


>sp|SYDND_METMJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 YTLIDWPT 8
Y ++DWPT
Sbjct: 317 YFIVDWPT 324


>sp|Y1725_METS5|PUTATIVE HTH-type transcriptional regulatory protein|Metallosphaera sedula

Query: 1 YTLIDWPTHN 10
YTLI++P N
Sbjct: 20 YTLIEYPEKN 29


>sp|SYDND_ARCFU|ASPARTATE--TRNA(ASP/ASN) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YTLIDWPTHN 10
Y + DWPT +
Sbjct: 318 YFITDWPTES 327


>sp|SYDND_SULTO|ASPARTATE--TRNA(ASP/ASN) ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YTLIDWPT 8
Y ++DWP+
Sbjct: 317 YFIVDWPS 324


>sp|SYDND_METHJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 YTLIDWPT 8
Y ++DWP+
Sbjct: 318 YFIVDWPS 325


>sp|SYDND_META3|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 YTLIDWPT 8
Y + DWPT
Sbjct: 326 YFITDWPT 333


>sp|SYDND_METBU|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 YTLIDWPT 8
Y + DWPT
Sbjct: 331 YFITDWPT 338


>sp|EF1A_THEVO|ELONGATION factor 1-alpha|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YTLIDWPTH 9
+TLID P H
Sbjct: 87 FTLIDAPGH 95


>sp|EF1A_THEAC|ELONGATION factor 1-alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YTLIDWPTH 9
+TLID P H
Sbjct: 87 FTLIDAPGH 95


>sp|EF1A_CENSY|ELONGATION factor 1-alpha|Cenarchaeum symbiosum (strain A)

Query: 1 YTLIDWPTH 9
+TLID P H
Sbjct: 91 FTLIDAPGH 99


>sp|EF1A_THEPD|ELONGATION factor 1-alpha|Thermofilum pendens (strain DSM 2475

Query: 1 YTLIDWPTH 9
+TLID P H
Sbjct: 87 FTLIDAPGH 95


>sp|EF1A_METST|ELONGATION factor 1-alpha|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 YTLIDWPTH 9
YT++D P H
Sbjct: 77 YTVVDCPGH 85


>sp|EF1A_METS3|ELONGATION factor 1-alpha|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 YTLIDWPTH 9
YT++D P H
Sbjct: 77 YTVVDCPGH 85


>sp|SYE_HYPBU|GLUTAMATE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 4 IDWPTHN 10
+ WPT+N
Sbjct: 272 VAWPTYN 278


>sp|RIO2_METJA|RIO-TYPE serine/threonine-protein kinase Rio2|Methanocaldococcus jannaschii

Query: 1 YTLIDWP 7
+ +IDWP
Sbjct: 216 FVIIDWP 222


>sp|EF1A_CALMQ|ELONGATION factor 1-alpha|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 YTLIDWPTH 9
+T+ID P H
Sbjct: 96 FTIIDLPGH 104


>sp|TMCA_HALVD|TRNA(MET) cytidine acetyltransferase TmcA|Haloferax volcanii (strain ATCC

Query: 2 TLIDWPT 8
+L DWPT
Sbjct: 119 SLDDWPT 125


>sp|SYE_PYRIL|GLUTAMATE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 IDWPTHN 10
I WPT+N
Sbjct: 284 IVWPTYN 290


>sp|SYE_PYRCJ|GLUTAMATE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 IDWPTHN 10
I WPT+N
Sbjct: 284 IVWPTYN 290


>sp|SYE_CALMQ|GLUTAMATE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 IDWPTHN 10
I WPT+N
Sbjct: 294 IVWPTYN 300


>sp|METE_THEVO|METHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YTLIDW 6
YT++DW
Sbjct: 129 YTMMDW 134


>sp|SYE_PYRNV|GLUTAMATE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 6 WPTHN 10
WPT+N
Sbjct: 286 WPTYN 290


>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 IDWPTHN 10
I WPT+N
Sbjct: 284 IVWPTYN 290


>sp|SYE_PYRAE|GLUTAMATE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 IDWPTHN 10
I WPT+N
Sbjct: 284 IVWPTYN 290


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 6 WPTHN 10
WPT+N
Sbjct: 283 WPTYN 287


>sp|SYDND_METVS|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 YTLIDWPTH 9
Y + +WPT
Sbjct: 326 YFITEWPTQ 334


>sp|SYDND_METMP|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YTLIDWPTH 9
Y + +WPT
Sbjct: 326 YFITEWPTQ 334


>sp|SYDND_METM7|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C7 /

Query: 1 YTLIDWPTH 9
Y + +WPT
Sbjct: 326 YFITEWPTQ 334


>sp|SYDND_METM6|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C6 /

Query: 1 YTLIDWPTH 9
Y + +WPT
Sbjct: 326 YFITEWPTQ 334


>sp|SYDND_METM5|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C5 /

Query: 1 YTLIDWPTH 9
Y + +WPT
Sbjct: 326 YFITEWPTQ 334


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 6 WPTHN 10
WPT+N
Sbjct: 279 WPTYN 283


>sp|EF1A_SULTO|ELONGATION factor 1-alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YTLIDWPTH 9
+T+ID P H
Sbjct: 86 FTIIDAPGH 94


>sp|EF1A_SACS2|ELONGATION factor 1-alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YTLIDWPTH 9
+T+ID P H
Sbjct: 86 FTIIDAPGH 94


>sp|EF1A_PICTO|ELONGATION factor 1-alpha|Picrophilus torridus (strain ATCC 700027

Query: 1 YTLIDWPTH 9
+T+ID P H
Sbjct: 87 FTIIDAPGH 95


>sp|EF1A_METS5|ELONGATION factor 1-alpha|Metallosphaera sedula (strain ATCC 51363

Query: 1 YTLIDWPTH 9
+T+ID P H
Sbjct: 86 FTIIDAPGH 94


>sp|EF1A_IGNH4|ELONGATION factor 1-alpha|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 YTLIDWPTH 9
+T+ID P H
Sbjct: 88 FTIIDAPGH 96


>sp|EF1A_HYPBU|ELONGATION factor 1-alpha|Hyperthermus butylicus (strain DSM 5456

Query: 1 YTLIDWPTH 9
+T+ID P H
Sbjct: 87 FTIIDAPGH 95


>sp|EF1A_DESMO|ELONGATION factor 1-alpha|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 1 YTLIDWPTH 9
+T+ID P H
Sbjct: 88 FTIIDAPGH 96


>sp|EF1A_AERPE|ELONGATION factor 1-alpha|Aeropyrum pernix (strain ATCC 700893

Query: 1 YTLIDWPTH 9
+T+ID P H
Sbjct: 86 FTIIDAPGH 94


>sp|EF1A_STAMF|ELONGATION factor 1-alpha|Staphylothermus marinus (strain ATCC 43588

Query: 1 YTLIDWPTH 9
+T+ID P H
Sbjct: 87 FTIIDAPGH 95


>sp|SYE_SACS2|GLUTAMATE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 6 WPTHN 10
WPT+N
Sbjct: 288 WPTYN 292


>sp|SYE_SULTO|GLUTAMATE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 6 WPTHN 10
WPT+N
Sbjct: 280 WPTYN 284


>sp|SYDND_METLZ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 YTLIDWPT 8
Y + +WPT
Sbjct: 317 YFITEWPT 324


>sp|SYE_THEPD|GLUTAMATE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 6 WPTHN 10
WPT+N
Sbjct: 284 WPTYN 288


>sp|SYE_METS5|GLUTAMATE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 6 WPTHN 10
WPT+N
Sbjct: 281 WPTYN 285


>sp|TF2B_SACSH|TRANSCRIPTION initiation factor IIB|Saccharolobus shibatae (strain ATCC 51178

Query: 2 TLIDW 6
TLIDW
Sbjct: 75 TLIDW 79


>sp|TF2B1_SACS2|TRANSCRIPTION initiation factor IIB 1|Saccharolobus solfataricus (strain ATCC

Query: 2 TLIDW 6
TLIDW
Sbjct: 78 TLIDW 82


>sp|SYE_SULAC|GLUTAMATE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 6 WPTHN 10
WPT+N
Sbjct: 281 WPTYN 285


>sp|PSTS_METJA|PHOSPHATE-BINDING protein PstS|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 IDWPTHN 10
++WPT N
Sbjct: 224 VNWPTDN 230


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 4 IDWPTHN 10
I WPT+N
Sbjct: 266 ILWPTYN 272


>sp|EF1A_NATPD|ELONGATION factor 1-alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 YTLIDWPTH 9
+T++D P H
Sbjct: 87 FTIVDCPGH 95


>sp|EF1A_METTH|ELONGATION factor 1-alpha|Methanothermobacter thermautotrophicus (strain

Query: 1 YTLIDWPTH 9
+T++D P H
Sbjct: 77 FTIVDCPGH 85


>sp|EF1A_METKA|ELONGATION factor 1-alpha|Methanopyrus kandleri (strain AV19 /

Query: 1 YTLIDWPTH 9
+T++D P H
Sbjct: 77 FTIVDCPGH 85


>sp|EF1A_HALWD|ELONGATION factor 1-alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 1 YTLIDWPTH 9
+T++D P H
Sbjct: 86 FTIVDCPGH 94


>sp|EF1A_HALSA|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 700922

Query: 1 YTLIDWPTH 9
+T++D P H
Sbjct: 86 FTIVDCPGH 94


>sp|EF1A_HALS3|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 29341

Query: 1 YTLIDWPTH 9
+T++D P H
Sbjct: 86 FTIVDCPGH 94


>sp|EF1A_HALMA|ELONGATION factor 1-alpha|Haloarcula marismortui (strain ATCC 43049

Query: 1 YTLIDWPTH 9
+T++D P H
Sbjct: 86 FTIVDCPGH 94


>sp|SRP19_METTH|SIGNAL recognition particle 19 kDa|Methanothermobacter

Query: 3 LIDWPTH 9
LI WPT+
Sbjct: 3 LIIWPTY 9


>sp|Y412_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 YTLIDWPT 8
YTL+ W T
Sbjct: 98 YTLMPWRT 105


>sp|TRUD_METMA|PROBABLE tRNA pseudouridine synthase D|Methanosarcina mazei (strain ATCC

Query: 5 DWPTHN 10
DW TH+
Sbjct: 58 DWDTHH 63


>sp|TRUD_METBF|PROBABLE tRNA pseudouridine synthase D|Methanosarcina barkeri (strain

Query: 5 DWPTHN 10
DW TH+
Sbjct: 58 DWDTHH 63


>sp|TRUD_METAC|PROBABLE tRNA pseudouridine synthase D|Methanosarcina acetivorans (strain

Query: 5 DWPTHN 10
DW TH+
Sbjct: 61 DWDTHH 66


>sp|ARGDC_PYRNV|ARGININE decarboxylase proenzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 6 WPTHN 10
WPT+N
Sbjct: 81 WPTYN 85




598|SequenceR|2995|2986|SGSQKYTLID

>sp|ACKA_METBF|ACETATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 SGSQKYTLID 10
S S KY LID
Sbjct: 10 SSSLKYQLID 19


>sp|ACKA_METTE|ACETATE kinase|Methanosarcina thermophila

Query: 1 SGSQKYTLID 10
S S KY LID
Sbjct: 10 SSSLKYQLID 19


>sp|ACKA_METMZ|ACETATE kinase|Methanosarcina mazei (Methanosarcina frisia)

Query: 1 SGSQKYTLID 10
S S KY LID
Sbjct: 10 SSSLKYQLID 19


>sp|ACKA_METMA|ACETATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SGSQKYTLID 10
S S KY LID
Sbjct: 10 SSSLKYQLID 19


>sp|ACKA_METAC|ACETATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SGSQKYTLID 10
S S KY LID
Sbjct: 10 SSSLKYQLID 19


>sp|AROA_METJA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocaldococcus jannaschii (strain

Query: 2 GSQKYTLID 10
G+QKY ID
Sbjct: 225 GNQKYKPID 233


>sp|COFE_METM6|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C6 /

Query: 1 SGSQKYTLID 10
SG+++YTL +
Sbjct: 19 SGNEEYTLAE 28


>sp|FTR_METFV|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanothermus fervidus (strain ATCC 43054

Query: 2 GSQKYTLID 10
GS+KY +D
Sbjct: 209 GSKKYDFLD 217


>sp|GATB_SULTO|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfurisphaera tokodaii (strain DSM

Query: 3 SQKYTLID 10
+ KYTL+D
Sbjct: 139 TSKYTLLD 146


>sp|GATB_SACS2|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 3 SQKYTLID 10
+ KYTL+D
Sbjct: 138 TSKYTLLD 145


>sp|GATB_METHJ|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanospirillum hungatei JF-1 (strain

Query: 5 KYTLID 10
KYTL+D
Sbjct: 142 KYTLVD 147




599|SequenceR|3000|2991|VMEEPSGSQK

>sp|PGP_PYRIL|PHOSPHOGLYCOLATE phosphatase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VMEEPSG 7
V+EEPSG
Sbjct: 204 VVEEPSG 210


>sp|KAE1B_METHJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 EEPSGSQK 10
EEPSGS++
Sbjct: 320 EEPSGSER 327


>sp|R1PKD_THEKO|ADP-DEPENDENT ribose-1-phosphate kinase|Thermococcus kodakarensis (strain ATCC

Query: 1 VMEEPSG 7
V+EEPSG
Sbjct: 87 VVEEPSG 93


>sp|SAT_CENSY|SULFATE adenylyltransferase|Cenarchaeum symbiosum (strain A)

Query: 1 VMEEPSGSQ 9
++E+PSGS+
Sbjct: 96 LLEDPSGSK 104


>sp|RL14_HALWD|LARGE ribosomal subunit protein uL14|Haloquadratum walsbyi (strain DSM

Query: 2 MEEPSGSQ 9
MEEP G++
Sbjct: 101 MEEPRGTE 108


>sp|TFS1_SACS2|TRANSCRIPTION factor S1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 EEPSGSQK 10
E PSG+QK
Sbjct: 62 EMPSGAQK 69




600|SequenceR|3005|2996|QRPLLVMEEP

>sp|AATA_HALMA|A-TYPE ATP synthase subunit A|Haloarcula marismortui (strain ATCC 43049

Query: 1 QRPLLVMEE 9
QRPL V+EE
Sbjct: 96 QRPLDVLEE 104


>sp|AATA_NATPD|A-TYPE ATP synthase subunit A|Natronomonas pharaonis (strain ATCC 35678

Query: 1 QRPLLVMEE 9
QRPL V+EE
Sbjct: 96 QRPLDVLEE 104


>sp|ENO_METS5|ENOLASE sedula (strain ATCC 51363

Query: 3 PLLVMEEP 10
PLL +E+P
Sbjct: 277 PLLYLEDP 284


>sp|HDRA_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 2 RPLLVMEEP 10
RP +ME+P
Sbjct: 455 RPACIMEDP 463


>sp|RAD50_ARCFU|DNA double-strand break repair Rad50|Archaeoglobus fulgidus (strain

Query: 3 PLLVMEEP 10
PLL+++EP
Sbjct: 819 PLLILDEP 826


>sp|Y1489_METJA|MCM-LIKE protein MJ1489|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QRPLLVMEEP 10
Q+PL +ME P
Sbjct: 198 QQPLDLMENP 207


>sp|AATA_METJA|A-TYPE ATP synthase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 1 QRPLLVMEE 9
QRPL +EE
Sbjct: 89 QRPLTAIEE 97


>sp|AATA_HALSA|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 700922

Query: 1 QRPLLVMEE 9
QRPL V+E+
Sbjct: 94 QRPLDVLED 102


>sp|AATA_HALS3|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 29341

Query: 1 QRPLLVMEE 9
QRPL V+E+
Sbjct: 94 QRPLDVLED 102


>sp|RAD50_THEVO|DNA double-strand break repair Rad50|Thermoplasma volcanium (strain

Query: 4 LLVMEEP 10
LLVM+EP
Sbjct: 828 LLVMDEP 834


>sp|RPO2C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 1 QRPLLVME 8
+RPLLV+E
Sbjct: 63 RRPLLVVE 70


>sp|RPO2C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 1 QRPLLVME 8
+RPLLV+E
Sbjct: 63 RRPLLVVE 70


>sp|Y474_KORCO|UPF0310 protein Kcr_0474|Korarchaeum cryptofilum (strain OPF8)

Query: 2 RPLLVMEEP 10
RP+ + EEP
Sbjct: 95 RPVKIFEEP 103




601|SequenceR|3010|3001|AFLRAQRPLL

>sp|AMPPA_NATPD|AMP phosphorylase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 LRAQRPL 9
+RAQRPL
Sbjct: 245 IRAQRPL 251


>sp|THIM_METMJ|HYDROXYETHYLTHIAZOLE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 AFLRAQRPLL 10
A +R+QRPL+
Sbjct: 24 AAVRSQRPLV 33


>sp|EF2_PYRCJ|ELONGATION factor 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 AFLRAQRPLL 10
AFLRA+ P+L
Sbjct: 670 AFLRAELPVL 679


>sp|EF2_PYRAE|ELONGATION factor 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AFLRAQRPLL 10
AFLRA+ P+L
Sbjct: 670 AFLRAELPVL 679


>sp|NFI_PYRAB|ENDONUCLEASE V|Pyrococcus abyssi (strain GE5 /

Query: 2 FLRAQRPLL 10
FLR RP+L
Sbjct: 73 FLRETRPIL 81


>sp|GUAAA_IGNH4|GMP synthase [glutamine-hydrolyzing] subunit A|Ignicoccus hospitalis

Query: 1 AFLRAQRPLL 10
A+LR ++PLL
Sbjct: 67 AYLRWKKPLL 76


>sp|ARGC_METB6|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoregula boonei (strain DSM 21154

Query: 2 FLRAQRPLL 10
F+R Q+P+L
Sbjct: 260 FVRYQKPML 268


>sp|EF2_PYRIL|ELONGATION factor 2|Pyrobaculum islandicum (strain DSM 4184

Query: 1 AFLRAQRPLL 10
A+LRA+ P+L
Sbjct: 670 AYLRAELPVL 679


>sp|EF2_PYRAR|ELONGATION factor 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 AFLRAQRPLL 10
A+LRA+ P+L
Sbjct: 670 AYLRAELPVL 679


>sp|EF2_PYRNV|ELONGATION factor 2|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 AFLRAQRPLL 10
A+LRA+ P+L
Sbjct: 670 AYLRAELPVL 679


>sp|NFI_THEKO|ENDONUCLEASE V|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FLRAQRPLL 10
FLR RP+L
Sbjct: 79 FLRETRPVL 87


>sp|HEM1_PYRAE|GLUTAMYL-TRNA reductase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 LRAQRPLL 10
LR+Q+PLL
Sbjct: 385 LRSQKPLL 392




602|SequenceR|3015|3006|TPDAWAFLRA

>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 2 PDAWAFLRA 10
P WAFLRA
Sbjct: 1225 PVRWAFLRA 1233


>sp|Y3591_METAC|PROTEIN MA_3591|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TPDAWA 6
+PDAWA
Sbjct: 167 SPDAWA 172


>sp|SYC_IGNH4|CYSTEINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 TPDAWAFLR 9
TP+AWA +R
Sbjct: 364 TPEAWAAVR 372


>sp|Y1363_THEON|UPF0282 protein TON_1363|Thermococcus onnurineus (strain NA1)

Query: 4 AWAFLR 9
AWAFL+
Sbjct: 121 AWAFLK 126


>sp|NK_METJA|NUCLEOSIDE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TPDAWAF 7
TP AW F
Sbjct: 96 TPKAWIF 102


>sp|APE2_SACS2|LEUCYL aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 DAWAFLRA 10
D WAFL A
Sbjct: 524 DYWAFLLA 531


>sp|Y1681_THEKO|UPF0282 protein TK1681|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 AWAFLR 9
AWAFL+
Sbjct: 121 AWAFLK 126


>sp|Y379_THEGJ|UPF0282 protein TGAM_0379|Thermococcus gammatolerans (strain DSM 15229

Query: 4 AWAFLR 9
AWAFL+
Sbjct: 121 AWAFLK 126


>sp|Y1029_THESM|UPF0282 protein TSIB_1029|Thermococcus sibiricus (strain DSM 12597

Query: 4 AWAFLR 9
AWAFL+
Sbjct: 121 AWAFLK 126


>sp|FLAB2_THEKO|FLAGELLIN B2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 AWAFLRA 10
AWA LRA
Sbjct: 496 AWAALRA 502


>sp|TRPD_METAC|ANTHRANILATE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 TPDAWAFLRA 10
TP+A LRA
Sbjct: 250 TPEAMGMLRA 259


>sp|IDI2_THESM|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus sibiricus (strain DSM 12597

Query: 3 DAWAFLR 9
D W FLR
Sbjct: 364 DLWEFLR 370


>sp|TRPF_HALLT|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 TPDAWAFLRA 10
TPD F+RA
Sbjct: 89 TPDEIRFIRA 98




603|SequenceR|3020|3011|LKRTGTPDAW

>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KRTGTPDAW 10
KRTG PD W
Sbjct: 271 KRTGNPDLW 279


>sp|IF2P_HALLT|PROBABLE translation initiation factor IF-2|Halorubrum lacusprofundi (strain

Query: 1 LKRTGTP 7
L+RTGTP
Sbjct: 123 LRRTGTP 129


>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LKRTGTPDAW 10
KR G P+ W
Sbjct: 269 FKRIGKPNEW 278


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 LKRTGTPDAW 10
KR G P+ W
Sbjct: 269 FKRIGKPNEW 278


>sp|SYM_PYRHO|METHIONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LKRTGTPDAW 10
KR G P+ W
Sbjct: 269 FKRLGKPNEW 278


>sp|DGGGP_KORCO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LKRTGTP 7
LKRTG P
Sbjct: 123 LKRTGVP 129


>sp|Y1234_STAMF|UPF0200 protein Smar_1234|Staphylothermus marinus (strain ATCC 43588

Query: 3 RTGTPDAW 10
R G PD W
Sbjct: 125 RPGDPDNW 132


>sp|IF2P_HALWD|PROBABLE translation initiation factor IF-2|Haloquadratum walsbyi (strain

Query: 1 LKRTGTP 7
L+RTGTP
Sbjct: 146 LQRTGTP 152


>sp|FRHB_METVO|COENZYME F420 hydrogenase subunit beta|Methanococcus voltae

Query: 5 GTPDAW 10
G+PD W
Sbjct: 210 GSPDGW 215


>sp|IF2A_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 1 LKRTGTPDAW 10
LK G P+ W
Sbjct: 151 LKNAGVPEVW 160


>sp|FRHB_METJA|COENZYME F420 hydrogenase subunit beta|Methanocaldococcus jannaschii (strain

Query: 5 GTPDAW 10
G+PD W
Sbjct: 217 GSPDGW 222


>sp|IF2A_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 LKRTGTPDAW 10
L++ G P+ W
Sbjct: 161 LEKAGVPEEW 170


>sp|UVRB_METBU|UVRABC system protein B|Methanococcoides burtonii (strain DSM 6242

Query: 5 GTPDAW 10
G+PD W
Sbjct: 148 GSPDEW 153


>sp|CBIA_THEAC|COBYRINATE a,c-diamide synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KRTGTP 7
+RTGTP
Sbjct: 110 RRTGTP 115


>sp|YPZ8_METTF|UNCHARACTERIZED protein ORF8'|Methanothermobacter thermautotrophicus

Query: 1 LKRTGTPDAW 10
L+R G P +W
Sbjct: 280 LRRDGLPRSW 289


>sp|FPOF_METMA|F(420)H(2) dehydrogenase subunit F|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 GTPDAW 10
G PD W
Sbjct: 274 GAPDGW 279


>sp|COBD_PYRFU|PROBABLE cobalamin biosynthesis protein CobD|Pyrococcus furiosus (strain

Query: 1 LKRTGTPD 8
+KRT TPD
Sbjct: 98 VKRTITPD 105


>sp|RS4E_PYRHO|SMALL ribosomal subunit protein eS4|Pyrococcus horikoshii (strain ATCC

Query: 1 LKRTGTPDAW 10
LKR P +W
Sbjct: 10 LKRLAAPSSW 19


>sp|FRHB_METTH|COENZYME F420 hydrogenase subunit beta|Methanothermobacter

Query: 5 GTPDAW 10
G+PD W
Sbjct: 211 GSPDGW 216


>sp|RS4E_THEKO|SMALL ribosomal subunit protein eS4|Thermococcus kodakarensis (strain

Query: 1 LKRTGTPDAW 10
LKR P +W
Sbjct: 10 LKRLAAPTSW 19


>sp|RS4E_METHJ|SMALL ribosomal subunit protein eS4|Methanospirillum hungatei JF-1

Query: 1 LKRTGTPDAW 10
LKR +P +W
Sbjct: 5 LKRVVSPKSW 14


>sp|IF2A_HYPBU|TRANSLATION initiation factor 2 subunit|Hyperthermus butylicus (strain DSM 5456

Query: 1 LKRTGTPDAW 10
L+ G P+ W
Sbjct: 151 LREAGVPEEW 160


>sp|RS4E_PYRFU|SMALL ribosomal subunit protein eS4|Pyrococcus furiosus (strain ATCC

Query: 1 LKRTGTPDAW 10
LKR P +W
Sbjct: 10 LKRLAAPTSW 19


>sp|LEU3_METTH|3-ISOPROPYLMALATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LKRTGT 6
LKRTGT
Sbjct: 45 LKRTGT 50


>sp|RS4E_PYRAB|SMALL ribosomal subunit protein eS4|Pyrococcus abyssi (strain GE5 /

Query: 1 LKRTGTPDAW 10
LKR P +W
Sbjct: 10 LKRLAAPTSW 19


>sp|APGM_METVS|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus vannielii (strain ATCC 35089

Query: 4 TGTPDA 9
TGTPD+
Sbjct: 267 TGTPDS 272


>sp|HMGCS_METVS|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus vannielii (strain ATCC 35089

Query: 4 TGTPDAW 10
T TPD W
Sbjct: 184 TDTPDFW 190


>sp|HMGCS_METS5|HYDROXYMETHYLGLUTARYL-COA synthase|Metallosphaera sedula (strain ATCC 51363

Query: 4 TGTPDAW 10
T TPD W
Sbjct: 181 TDTPDFW 187


>sp|HMGCS_METTP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 TGTPDAW 10
T TPD W
Sbjct: 180 TDTPDFW 186


>sp|HMGCS_METM5|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C5 /

Query: 4 TGTPDAW 10
T TPD W
Sbjct: 184 TDTPDFW 190


>sp|FRHB_METBF|COENZYME F420 hydrogenase subunit beta|Methanosarcina barkeri (strain Fusaro

Query: 5 GTPDAW 10
G+PD W
Sbjct: 216 GSPDGW 221


>sp|HMGCS_METTL|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothermococcus thermolithotrophicus

Query: 4 TGTPDAW 10
T TPD W
Sbjct: 184 TDTPDFW 190


>sp|HMGCS_METJA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 TGTPDAW 10
T TPD W
Sbjct: 180 TDTPDFW 186


>sp|HMGCS_METMP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain DSM 14266

Query: 4 TGTPDAW 10
T TPD W
Sbjct: 184 TDTPDFW 190


>sp|HMGCS_METM7|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C7 /

Query: 4 TGTPDAW 10
T TPD W
Sbjct: 184 TDTPDFW 190


>sp|HMGCS_METM6|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C6 /

Query: 4 TGTPDAW 10
T TPD W
Sbjct: 184 TDTPDFW 190


>sp|HMGCS_PICTO|HYDROXYMETHYLGLUTARYL-COA synthase|Picrophilus torridus (strain ATCC 700027

Query: 4 TGTPDAW 10
T TPD W
Sbjct: 180 TDTPDFW 186


>sp|HMGCS_THESM|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus sibiricus (strain DSM 12597

Query: 4 TGTPDAW 10
T TPD W
Sbjct: 185 TDTPDFW 191


>sp|BLH_HALSA|PROBABLE beta-carotene 15,15'-dioxygenase Blh|Halobacterium salinarum

Query: 2 KRTGTPDAW 10
+RT +P AW
Sbjct: 214 RRTHSPGAW 222


>sp|HMGCS_PYRFU|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 TGTPDAW 10
T TPD W
Sbjct: 185 TDTPDFW 191


>sp|HMGCS_PYRHO|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 TGTPDAW 10
T TPD W
Sbjct: 185 TDTPDFW 191


>sp|IF2A_STAMF|TRANSLATION initiation factor 2 subunit|Staphylothermus marinus (strain ATCC

Query: 1 LKRTGTPDAW 10
L+ G P+ W
Sbjct: 151 LREAGIPEEW 160


>sp|HMGCS_METMA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 TGTPDAW 10
T TPD W
Sbjct: 183 TDTPDFW 189


>sp|HMGCS_METKA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanopyrus kandleri (strain AV19 /

Query: 4 TGTPDAW 10
T TPD W
Sbjct: 185 TDTPDFW 191


>sp|HMGCS_THEON|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus onnurineus (strain NA1)

Query: 4 TGTPDAW 10
T TPD W
Sbjct: 185 TDTPDFW 191


>sp|HMGCS_THEKO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 TGTPDAW 10
T TPD W
Sbjct: 185 TDTPDFW 191


>sp|HMGCS_THEGJ|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 4 TGTPDAW 10
T TPD W
Sbjct: 185 TDTPDFW 191


>sp|HMGCS_PYRAB|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus abyssi (strain GE5 /

Query: 4 TGTPDAW 10
T TPD W
Sbjct: 185 TDTPDFW 191


>sp|HMGCS_METBU|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcoides burtonii (strain DSM 6242

Query: 4 TGTPDAW 10
T TPD W
Sbjct: 183 TDTPDFW 189


>sp|HMGCS_METAC|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 TGTPDAW 10
T TPD W
Sbjct: 183 TDTPDFW 189


>sp|HMGCS_METBF|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 TGTPDAW 10
T TPD W
Sbjct: 183 TDTPDFW 189


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 5 GTPDAW 10
GTP+ W
Sbjct: 699 GTPEKW 704




604|SequenceR|3025|3016|AYTWTLKRTG

>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YTWTLK 7
YTWTLK
Sbjct: 710 YTWTLK 715


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AYTWTLKR 8
+Y WTL+R
Sbjct: 22 SYFWTLRR 29


>sp|GLCD2_VULM7|GLUCOSE 1-dehydrogenase 2|Vulcanisaeta moutnovskia (strain 768-28)

Query: 1 AYTWT 5
AYTWT
Sbjct: 331 AYTWT 335


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 AYTWTLKRTG 10
+Y W L+R+G
Sbjct: 750 SYRWYLRRSG 759


>sp|Y352_METJA|UNCHARACTERIZED protein MJ0352|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AYTWTLKRTG 10
AYT+ K+TG
Sbjct: 123 AYTYPDKKTG 132


>sp|Y1143_METST|PUTATIVE HTH-type transcriptional regulatory protein|Methanosphaera

Query: 2 YTWTLK 7
YTW LK
Sbjct: 323 YTWELK 328


>sp|PYRD_HALSA|DIHYDROOROTATE dehydrogenase (quinone)|Halobacterium salinarum (strain ATCC 700922

Query: 2 YTWTLKRTG 10
YT+T R G
Sbjct: 159 YTYTFSRVG 167


>sp|PYRD_HALS3|DIHYDROOROTATE dehydrogenase (quinone)|Halobacterium salinarum (strain ATCC 29341

Query: 2 YTWTLKRTG 10
YT+T R G
Sbjct: 159 YTYTFSRVG 167


>sp|PELO_METTH|PROTEIN pelota homolog|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 WTLKR 8
WTLKR
Sbjct: 120 WTLKR 124


>sp|END4_NATPD|PROBABLE endonuclease 4|Natronomonas pharaonis (strain ATCC 35678

Query: 1 AYTWTLKR 8
+Y W +KR
Sbjct: 263 SYPWNIKR 270


>sp|DGGGP_KORCO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 AYTWTLKRTG 10
AY LKRTG
Sbjct: 118 AYARWLKRTG 127


>sp|TOP6B_METBU|TYPE 2 DNA topoisomerase 6|Methanococcoides burtonii (strain DSM 6242

Query: 2 YTWTLK 7
Y WT+K
Sbjct: 570 YVWTMK 575


>sp|COXX_HYPBU|PROTOHEME IX farnesyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 AYTWTLKR 8
AYT+ LKR
Sbjct: 130 AYTYLLKR 137


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 YTWTLK 7
Y WTLK
Sbjct: 25 YFWTLK 30


>sp|RS4E_PYRCJ|SMALL ribosomal subunit protein eS4|Pyrobaculum calidifontis (strain DSM

Query: 4 WTLKR 8
WTLKR
Sbjct: 199 WTLKR 203


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 4 WTLKR 8
WTLKR
Sbjct: 163 WTLKR 167


>sp|RL37_METPE|LARGE ribosomal subunit protein eL37|Methanosphaerula palustris (strain

Query: 1 AYTWTLKRT 9
+Y WT KR+
Sbjct: 47 SYKWTTKRS 55


>sp|RS4E_PYRAE|SMALL ribosomal subunit protein eS4|Pyrobaculum aerophilum (strain ATCC

Query: 4 WTLKR 8
WTLKR
Sbjct: 199 WTLKR 203


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 WTLKR 8
WTLKR
Sbjct: 163 WTLKR 167


>sp|RS4E_PYRAR|SMALL ribosomal subunit protein eS4|Pyrobaculum arsenaticum (strain DSM

Query: 4 WTLKR 8
WTLKR
Sbjct: 199 WTLKR 203




605|SequenceR|3030|3021|EGVNAAYTWT

>sp|Y746_HALSA|UPF0229 protein VNG_0746C|Halobacterium salinarum (strain ATCC 700922

Query: 2 GVNAAYTW 9
GV+A YTW
Sbjct: 174 GVDAVYTW 181


>sp|DAPAT_METTH|LL-DIAMINOPIMELATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 2 GVNAAYTW 9
GVNA Y W
Sbjct: 342 GVNAPYIW 349


>sp|OFOA1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 2 GVNAAY 7
GVNAAY
Sbjct: 547 GVNAAY 552


>sp|DAPAT_METS3|LL-DIAMINOPIMELATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 GVNAAYTW 9
GVN+ Y W
Sbjct: 343 GVNSPYIW 350


>sp|COFC_METLZ|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 1 EGVNAAYTW 9
EG+N A W
Sbjct: 69 EGLNEAINW 77


>sp|FLAI_SULAC|ARCHAEAL flagellar ATPase motor FlaI|Sulfolobus acidocaldarius (strain ATCC

Query: 5 AAYTWT 10
AAY WT
Sbjct: 245 AAYIWT 250


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 3 VNAAYTW 9
+NA Y W
Sbjct: 85 INAPYVW 91


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 EGVNAAYTW 9
EG +YTW
Sbjct: 7827 EGTGVSYTW 7835


>sp|DNLI2_HALWD|DNA ligase 2|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EGVNAAYTW 9
+GV+A TW
Sbjct: 298 DGVDAVDTW 306




606|SequenceR|3035|3026|KLLDHEGVNA

>sp|PDXT_HALSA|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Halobacterium salinarum

Query: 1 KLLDHEGVNA 10
+LLD EG++A
Sbjct: 61 RLLDREGIDA 70


>sp|PDXT_HALS3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Halobacterium salinarum

Query: 1 KLLDHEGVNA 10
+LLD EG++A
Sbjct: 61 RLLDREGIDA 70


>sp|METXA_METZD|HOMOSERINE O-acetyltransferase|Methanosalsum zhilinae (strain DSM 4017

Query: 1 KLLDHEGVNA 10
KLLDH G+++
Sbjct: 135 KLLDHLGISS 144


>sp|NIFH_METHJ|NITROGENASE iron protein|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 LDHEGVN 9
+DH+G+N
Sbjct: 273 IDHQGIN 279


>sp|GUAAA_METKA|GMP synthase [glutamine-hydrolyzing] subunit A|Methanopyrus kandleri

Query: 1 KLLDHEGV 8
++LDHEG+
Sbjct: 105 EILDHEGI 112


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KLLDHEGVN 9
KLL+ EGVN
Sbjct: 685 KLLEIEGVN 693


>sp|ATGT_THEKO|TRNA-GUANINE(15) transglycosylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KLLDHEGV 8
KLLD++G+
Sbjct: 80 KLLDYDGI 87


>sp|FOLD_HALSA|BIFUNCTIONAL protein FolD|Halobacterium salinarum (strain ATCC 700922

Query: 1 KLLDHEGVN 9
KLL H+GV+
Sbjct: 146 KLLAHQGVD 154


>sp|GATD_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Archaeoglobus fulgidus (strain ATCC

Query: 2 LLDHEGV 8
L DHEGV
Sbjct: 154 LKDHEGV 160


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LLDHEGV 8
L DHEGV
Sbjct: 261 LSDHEGV 267


>sp|METXA_NATPD|HOMOSERINE O-acetyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 KLLDHEGV 8
+LLDH GV
Sbjct: 129 RLLDHLGV 136


>sp|METXA_HALLT|HOMOSERINE O-acetyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 KLLDHEGV 8
+LLDH GV
Sbjct: 149 RLLDHLGV 156


>sp|RPO5_METMA|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanosarcina mazei (strain ATCC

Query: 2 LLDHEGV 8
LLDHE V
Sbjct: 6 LLDHEAV 12


>sp|METXA_HALVD|HOMOSERINE O-acetyltransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 KLLDHEGV 8
+LLDH GV
Sbjct: 138 RLLDHLGV 145


>sp|METXA_HALPT|HOMOSERINE O-acetyltransferase|Haloferax prahovense (strain DSM 18310

Query: 1 KLLDHEGV 8
+LLDH GV
Sbjct: 138 RLLDHLGV 145


>sp|METXA_HALGM|HOMOSERINE O-acetyltransferase|Haloferax gibbonsii (strain ATCC 33959

Query: 1 KLLDHEGV 8
+LLDH GV
Sbjct: 138 RLLDHLGV 145


>sp|CIMA_METJA|(R)-CITRAMALATE synthase CimA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KLLDHEGVNA 10
KL+ EG+NA
Sbjct: 57 KLITKEGLNA 66


>sp|RPO5_METBF|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanosarcina barkeri (strain Fusaro

Query: 2 LLDHEGV 8
LLDHE V
Sbjct: 6 LLDHESV 12


>sp|PDXT_HALWD|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Haloquadratum walsbyi (strain

Query: 1 KLLDHEGVN 9
+LLD EG++
Sbjct: 60 RLLDREGID 68


>sp|RPO5_METAC|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanosarcina acetivorans (strain

Query: 2 LLDHEGV 8
LLDHE V
Sbjct: 6 LLDHESV 12


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 2 LLDHEGVN 9
L DHEG++
Sbjct: 45 LSDHEGIS 52


>sp|SYH_PYRAE|HISTIDINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KLLDHEGV 8
KLL+H GV
Sbjct: 172 KLLEHLGV 179


>sp|KADA_SULAC|ADENYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KLLDHEGVN 9
++LD++G+N
Sbjct: 23 EILDNQGIN 31


>sp|URED_HALWD|UREASE accessory protein UreD|Haloquadratum walsbyi (strain DSM 16790

Query: 1 KLLDHEG 7
+L DHEG
Sbjct: 248 RLTDHEG 254


>sp|ARLY_METAR|ARGININOSUCCINATE lyase|Methanocella arvoryzae (strain DSM 22066

Query: 4 DHEGVNA 10
+HEGV+A
Sbjct: 71 EHEGVDA 77




607|SequenceR|3040|3031|QGCGDKLLDH

>sp|Y730_METJA|UNCHARACTERIZED protein MJ0730|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GCGDKL 7
GCGDKL
Sbjct: 10 GCGDKL 15


>sp|FPOD_METMA|F(420)H(2) dehydrogenase subunit D|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GCGDKLLD 9
GC +KLLD
Sbjct: 83 GCVEKLLD 90


>sp|ARGX_SULTO|GLUTAMATE--LYSW ligase ArgX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 CGDKLLDH 10
CGDK+L +
Sbjct: 84 CGDKILTY 91


>sp|ARGX_SULAC|GLUTAMATE--LYSW ligase ArgX|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 CGDKLLDH 10
CGDK+L +
Sbjct: 84 CGDKILTY 91


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 QGCGDKL 7
QG GDKL
Sbjct: 748 QGMGDKL 754


>sp|METE_PYRHO|METHIONINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 CGDKLLD 9
CG KLLD
Sbjct: 294 CGMKLLD 300


>sp|LYSK_THEKO|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Thermococcus kodakarensis

Query: 2 GCGDKLLDH 10
G GD LDH
Sbjct: 289 GPGDSRLDH 297


>sp|LYSK_PYRAB|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus abyssi (strain

Query: 2 GCGDKLLDH 10
G GD LDH
Sbjct: 290 GPGDSRLDH 298


>sp|CETZ_METTP|TUBULIN-LIKE protein CetZ|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 CGDKLLD 9
CG+++LD
Sbjct: 12 CGNRILD 18


>sp|LYSK_PYRHO|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus horikoshii

Query: 2 GCGDKLLDH 10
G GD LDH
Sbjct: 289 GPGDSKLDH 297


>sp|LYSK_PYRFU|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus furiosus

Query: 2 GCGDKLLDH 10
G GD LDH
Sbjct: 289 GPGDSKLDH 297


>sp|METE_THEKO|METHIONINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 CGDKLLD 9
CG KLLD
Sbjct: 294 CGLKLLD 300


>sp|METE_PYRFU|METHIONINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 CGDKLLD 9
CG KLLD
Sbjct: 294 CGLKLLD 300


>sp|METE_PYRAB|METHIONINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 CGDKLLD 9
CG KLLD
Sbjct: 294 CGLKLLD 300


>sp|MPG1_SULAC|PUTATIVE mannose-1-phosphate guanyltransferase|Sulfolobus acidocaldarius

Query: 4 GDKLLDH 10
DK+LDH
Sbjct: 58 ADKVLDH 64


>sp|RPO3_PYRNV|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum neutrophilum (strain DSM

Query: 3 CGDKL 7
CGDKL
Sbjct: 203 CGDKL 207


>sp|GATD_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina barkeri (strain Fusaro /

Query: 2 GCGDKLLDH 10
G G ++LDH
Sbjct: 306 GSGPEILDH 314


>sp|Y732_METJA|UNCHARACTERIZED protein MJ0732|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GCGDKLLD 9
GC DKL++
Sbjct: 87 GCVDKLVE 94


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GCGDKLLDH 10
G GD + DH
Sbjct: 500 GYGDDIADH 508


>sp|END4_CENSY|PROBABLE endonuclease 4|Cenarchaeum symbiosum (strain A)

Query: 2 GCGDKLLDH 10
GCG KL H
Sbjct: 221 GCGSKLDRH 229


>sp|DNLJ_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 5 DKLLDH 10
D+LLDH
Sbjct: 594 DRLLDH 599


>sp|CYAS_METTP|CYSTEATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GCGDKLLDH 10
G G LLDH
Sbjct: 207 GMGTVLLDH 215




608|SequenceR|3045|3036|ADYPFQGCGD

>sp|SYP_META3|PROLINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 YPFQGCG 9
YP +GCG
Sbjct: 22 YPLKGCG 28


>sp|SYP_METVS|PROLINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 YPFQGCG 9
YP +GCG
Sbjct: 21 YPIKGCG 27


>sp|SYP_METMP|PROLINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 YPFQGCG 9
YP +GCG
Sbjct: 21 YPIKGCG 27


>sp|SYP_METM7|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 YPFQGCG 9
YP +GCG
Sbjct: 21 YPIKGCG 27


>sp|SYP_METM6|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 YPFQGCG 9
YP +GCG
Sbjct: 21 YPIKGCG 27


>sp|SYP_METM5|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 YPFQGCG 9
YP +GCG
Sbjct: 21 YPIKGCG 27


>sp|SYP_METJA|PROLINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YPFQGCG 9
YP +GCG
Sbjct: 21 YPIKGCG 27


>sp|TRPF_SACS2|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DYPFQGCG 9
DYP+ G G
Sbjct: 145 DYPYLGVG 152


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 DYPFQGCGD 10
DY F G GD
Sbjct: 555 DYVFLGAGD 563


>sp|AHBD_METBF|ADOMET-DEPENDENT heme synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ADYPFQ 6
AD+PFQ
Sbjct: 146 ADFPFQ 151


>sp|TIAS_STAMF|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Staphylothermus marinus

Query: 2 DYPFQGC 8
D PF GC
Sbjct: 14 DTPFGGC 20


>sp|Y1684_METTH|UNCHARACTERIZED protein MTH_1684|Methanothermobacter thermautotrophicus (strain

Query: 5 FQGCGD 10
F GCGD
Sbjct: 211 FSGCGD 216


>sp|DCD_SACS2|DCTP deaminase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DYPFQG 7
+YP+QG
Sbjct: 152 EYPYQG 157


>sp|MCH_METVS|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ADYPFQGCG 9
ADY Q CG
Sbjct: 152 ADYVAQKCG 160


>sp|APGM_METVS|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus vannielii (strain ATCC

Query: 4 PFQGCG 9
PF+ CG
Sbjct: 75 PFEACG 80


>sp|APGM_META3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus aeolicus (strain ATCC

Query: 4 PFQGCG 9
PF+ CG
Sbjct: 75 PFEACG 80


>sp|Y136_ARCFU|UNCHARACTERIZED protein AF_0136|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DYPFQGCG 9
D F GCG
Sbjct: 59 DLDFTGCG 66


>sp|APGM_METM7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C7 /

Query: 4 PFQGCG 9
PF+ CG
Sbjct: 75 PFEACG 80


>sp|APGM_METMP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain DSM

Query: 4 PFQGCG 9
PF+ CG
Sbjct: 75 PFEACG 80


>sp|APGM_METM5|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C5 /

Query: 4 PFQGCG 9
PF+ CG
Sbjct: 75 PFEACG 80


>sp|APGM_METM6|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C6 /

Query: 4 PFQGCG 9
PF+ CG
Sbjct: 75 PFEACG 80


>sp|Y1137_METTH|UNCHARACTERIZED protein MTH_1137|Methanothermobacter thermautotrophicus (strain

Query: 4 PFQGC 8
PF+GC
Sbjct: 150 PFEGC 154


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 5 FQGCGD 10
F+GCG+
Sbjct: 493 FRGCGE 498




609|SequenceR|3050|3041|HIQINADYPF

>sp|PURT_METVS|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus vannielii

Query: 1 HIQINADY 8
HIQI+ DY
Sbjct: 221 HIQIDGDY 228


>sp|PURT_METM7|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 1 HIQINADY 8
HIQI+ DY
Sbjct: 221 HIQIDGDY 228


>sp|PURT_METM5|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 1 HIQINADY 8
HIQI+ DY
Sbjct: 221 HIQIDGDY 228


>sp|RL10_HALMA|LARGE ribosomal subunit protein uL10|Haloarcula marismortui (strain ATCC

Query: 1 HIQINADYP 9
++ +NADYP
Sbjct: 228 NLSVNADYP 236


>sp|PURT_METMP|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 1 HIQINADY 8
HIQ++ DY
Sbjct: 221 HIQVDGDY 228


>sp|PURT_METJA|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocaldococcus

Query: 1 HIQINADY 8
H+QI+ DY
Sbjct: 222 HVQIDGDY 229


>sp|SYH_PICTO|HISTIDINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 HIQINAD 7
HIQ NAD
Sbjct: 119 HIQFNAD 125


>sp|KORA_METTM|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter marburgensis (strain ATCC

Query: 1 HIQINADYPF 10
+I+IN +PF
Sbjct: 303 YIKINTPWPF 312


>sp|T2MT_METTF|TYPE II restriction enzyme MthTI|Methanothermobacter thermautotrophicus

Query: 2 IQINADYP 9
IQ+N+ YP
Sbjct: 96 IQLNSSYP 103


>sp|RL10_NATPD|LARGE ribosomal subunit protein uL10|Natronomonas pharaonis (strain ATCC

Query: 1 HIQINADYP 9
++ +NA+YP
Sbjct: 227 NLSVNAEYP 235


>sp|Y730_METJA|UNCHARACTERIZED protein MJ0730|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IQINADYPF 10
+++NA+ PF
Sbjct: 63 VEVNANAPF 71


>sp|PURT_THEKO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Thermococcus

Query: 1 HIQINADY 8
H QI+ DY
Sbjct: 232 HYQIDGDY 239


>sp|PURT_PYRHO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus horikoshii

Query: 1 HIQINADY 8
H QI+ DY
Sbjct: 232 HYQIDGDY 239


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 1 HIQINADY 8
H QI+ DY
Sbjct: 232 HYQIDGDY 239


>sp|PURT_PYRAB|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus abyssi

Query: 1 HIQINADY 8
H QI+ DY
Sbjct: 232 HYQIDGDY 239


>sp|RAD50_METMP|DNA double-strand break repair Rad50|Methanococcus maripaludis (strain

Query: 1 HIQINADY 8
HIQ+ DY
Sbjct: 886 HIQLKDDY 893




610|SequenceR|3055|3046|LFSVWHIQIN

>sp|RRP4_METS3|EXOSOME complex component Rrp4|Methanobrevibacter smithii (strain ATCC

Query: 2 FSVWHIQIN 10
FS+W + IN
Sbjct: 75 FSMWDVDIN 83


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FSVWHIQI 9
FS W+IQI
Sbjct: 705 FSRWYIQI 712


>sp|AGL5_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl5|Haloferax volcanii

Query: 1 LFSVWHIQI 9
LFS W+I++
Sbjct: 79 LFSFWNIKL 87


>sp|RRP4_METTH|EXOSOME complex component Rrp4|Methanothermobacter thermautotrophicus

Query: 2 FSVWHIQIN 10
FS+W + IN
Sbjct: 75 FSMWGLDIN 83


>sp|PORB_PYRAB|PYRUVATE synthase subunit PorB|Pyrococcus abyssi (strain GE5 /

Query: 4 VWHIQI 9
+WHI+I
Sbjct: 256 IWHIKI 261


>sp|DLYKI_THEX4|D-LYXOSE ketol-isomerase|Thermofilum sp. (strain ex4484_79)

Query: 2 FSVWH 6
F+VWH
Sbjct: 121 FTVWH 125


>sp|IF2P_PYRIL|PROBABLE translation initiation factor IF-2|Pyrobaculum islandicum (strain

Query: 1 LFSVWHIQ 8
+F+VW +Q
Sbjct: 326 IFAVWDLQ 333


>sp|ABLA_METMA|L-LYSINE 2,3-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LFSVWHIQI 9
LFS+ H++I
Sbjct: 189 LFSIPHVEI 197


>sp|Y3368_HALWD|UPF0173 metal-dependent hydrolase HQ_3368A|Haloquadratum walsbyi (strain

Query: 3 SVWHIQIN 10
S WH+ ++
Sbjct: 9 STWHVNVD 16


>sp|Y534_METJA|UNCHARACTERIZED protein MJ0534|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VWHIQIN 10
+WHI I+
Sbjct: 223 IWHIMID 229




611|SequenceR|3060|3051|RQRGDLFSVW

>sp|DCD_METS5|DCTP deaminase|Metallosphaera sedula (strain ATCC 51363

Query: 1 RQRGDLFSVW 10
R+RG+ F +W
Sbjct: 62 RERGNEFVIW 71


>sp|MRE11_THEVO|DNA double-strand break repair protein|Thermoplasma volcanium (strain

Query: 4 GDLFSVW 10
GDLF W
Sbjct: 49 GDLFDTW 55


>sp|G3P_PICTO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 1 RQRGDLFSV 9
R RGDL+ +
Sbjct: 269 RDRGDLYEI 277


>sp|MRE11_THEAC|DNA double-strand break repair protein|Thermoplasma acidophilum

Query: 4 GDLFSVW 10
GDLF W
Sbjct: 45 GDLFDTW 51


>sp|PTH_CALMQ|PEPTIDYL-TRNA hydrolase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 RQRGDLFSVW 10
R RGD + W
Sbjct: 38 RNRGDWVNAW 47


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 RQRGDLFSVW 10
++ GD+F VW
Sbjct: 510 KRVGDIFDVW 519


>sp|G3P_METST|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 RQRGDLFSV 9
R RGD++ +
Sbjct: 271 RSRGDMYEI 279


>sp|Y1297_METTP|UPF0280 protein Mthe_1297|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 RGDLFSVW 10
RGD +VW
Sbjct: 211 RGDEMAVW 218


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 GDLFSVW 10
GD+F VW
Sbjct: 527 GDVFDVW 533


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 RQRGDLFSVW 10
R+ D+F VW
Sbjct: 564 RRVEDIFDVW 573


>sp|SYE_METS5|GLUTAMATE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 4 GDLFSVW 10
GD F VW
Sbjct: 275 GDKFRVW 281




612|SequenceR|3065|3056|TFLLVRQRGD

>sp|SYDND_METLZ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 TFLLVRQR 8
TFLLVR R
Sbjct: 31 TFLLVRDR 38


>sp|NIFH_METMJ|NITROGENASE iron protein|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 LVRQRGD 10
L+R+RGD
Sbjct: 59 LIRERGD 65




613|SequenceR|3070|3061|LAVDDTFLLV

>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 AVDDTFLL 9
A DDTF+L
Sbjct: 90 ARDDTFIL 97


>sp|RL14E_THEPD|LARGE ribosomal subunit protein eL14|Thermofilum pendens (strain DSM

Query: 3 VDDTFLLV 10
+DD F+LV
Sbjct: 28 IDDNFVLV 35


>sp|RL14E_SACS2|LARGE ribosomal subunit protein eL14|Saccharolobus solfataricus (strain

Query: 3 VDDTFLLV 10
+DD F+LV
Sbjct: 28 IDDNFVLV 35


>sp|RL14E_SACI7|LARGE ribosomal subunit protein eL14|Saccharolobus islandicus (strain

Query: 3 VDDTFLLV 10
+DD F+LV
Sbjct: 28 IDDNFVLV 35


>sp|RL14E_SACI6|LARGE ribosomal subunit protein eL14|Saccharolobus islandicus (strain

Query: 3 VDDTFLLV 10
+DD F+LV
Sbjct: 28 IDDNFVLV 35


>sp|RL14E_SACI4|LARGE ribosomal subunit protein eL14|Saccharolobus islandicus (strain

Query: 3 VDDTFLLV 10
+DD F+LV
Sbjct: 28 IDDNFVLV 35


>sp|RL14E_SACI3|LARGE ribosomal subunit protein eL14|Saccharolobus islandicus (strain

Query: 3 VDDTFLLV 10
+DD F+LV
Sbjct: 28 IDDNFVLV 35


>sp|RL14E_SACI2|LARGE ribosomal subunit protein eL14|Saccharolobus islandicus (strain

Query: 3 VDDTFLLV 10
+DD F+LV
Sbjct: 28 IDDNFVLV 35


>sp|RL14E_SACI1|LARGE ribosomal subunit protein eL14|Saccharolobus islandicus (strain

Query: 3 VDDTFLLV 10
+DD F+LV
Sbjct: 28 IDDNFVLV 35


>sp|RL14E_DESA1|LARGE ribosomal subunit protein eL14|Desulfurococcus amylolyticus

Query: 3 VDDTFLLV 10
+DD F+LV
Sbjct: 28 IDDNFVLV 35




614|SequenceR|3075|3066|LAKSVLAVDD

***** No hits found ******


615|SequenceR|3080|3071|MEEAQLAKSV

***** No hits found ******


616|SequenceR|3085|3076|YDAQEMEEAQ

>sp|MT872_AERPE|DNA (cytosine-5-)-methyltransferase M.ApeKI|Aeropyrum pernix (strain

Query: 2 DAQEMEEA 9
D QE+EEA
Sbjct: 310 DKQELEEA 317


>sp|DHQS_METLZ|3-DEHYDROQUINATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 AQEMEEA 9
A+EMEEA
Sbjct: 77 AEEMEEA 83


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 YDAQEMEEAQ 10
YD++ +E+AQ
Sbjct: 484 YDSETLEDAQ 493


>sp|PANB_NITMS|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 DAQEMEEA 9
DA+E+EEA
Sbjct: 166 DAKELEEA 173


>sp|Y337_METJA|UNCHARACTERIZED protein MJ0337|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YDAQEMEEA 9
YDAQ +E+A
Sbjct: 7 YDAQIVEQA 15




617|SequenceR|3090|3081|SLTIEYDAQE

>sp|THIE_METVS|THIAMINE-PHOSPHATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LTIEYDA 8
LT+EYDA
Sbjct: 57 LTLEYDA 63


>sp|THIE_METM7|THIAMINE-PHOSPHATE synthase|Methanococcus maripaludis (strain C7 /

Query: 2 LTIEYDA 8
LT+EYDA
Sbjct: 57 LTLEYDA 63


>sp|QUEC_PYRAB|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 LTIEYDAQE 10
LTI Y +QE
Sbjct: 31 LTINYGSQE 39




618|SequenceR|3095|3086|GLSHLSLTIE

>sp|AGLF_HALVD|UTP--GLUCOSE-1-PHOSPHATE uridylyltransferase AglF|Haloferax volcanii (strain ATCC 29605

Query: 1 GLSHLSLTIE 10
GL+H LT+E
Sbjct: 83 GLAHALLTVE 92


>sp|KUP_METHJ|PROBABLE potassium transport system protein|Methanospirillum hungatei JF-1

Query: 1 GLSHLSLT 8
GLSHLS++
Sbjct: 534 GLSHLSIS 541


>sp|AMPPA_NATPD|AMP phosphorylase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 HLSLTIE 10
HL LTIE
Sbjct: 306 HLGLTIE 312


>sp|RL6_HALSA|LARGE ribosomal subunit protein uL6|Halobacterium salinarum (strain

Query: 2 LSHLSLTIE 10
+ HL LT+E
Sbjct: 16 VDHLDLTVE 24


>sp|Y002_METMP|UPF0425 pyridoxal phosphate-dependent protein MMP0002|Methanococcus

Query: 1 GLSHLS 6
GLSHLS
Sbjct: 66 GLSHLS 71




619|SequenceR|3100|3091|NVLSLGLSHL

>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 1 NVLSLGLSHL 10
N+++LGL HL
Sbjct: 91 NLVALGLEHL 100




620|SequenceR|3105|3096|QKSENNVLSL

>sp|DHYS_METVS|PROBABLE deoxyhypusine synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 QKSENNVLS 9
Q SEN +LS
Sbjct: 165 QNSENKILS 173


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QKSENNVLSL 10
+KSE N+LS+
Sbjct: 983 EKSEGNLLSV 992


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 1 QKSENNVLS 9
QK+E NVLS
Sbjct: 559 QKNEWNVLS 567


>sp|COFE_METTH|COENZYME F420:L-glutamate ligase|Methanothermobacter thermautotrophicus

Query: 2 KSENNVLSL 10
K+E N++SL
Sbjct: 50 KAEGNIISL 58




621|SequenceR|3110|3101|IYSVEQKSEN

***** No hits found ******


622|SequenceR|3115|3106|SSTIGIYSVE

>sp|PGK_METS5|PHOSPHOGLYCERATE kinase|Metallosphaera sedula (strain ATCC 51363

Query: 1 SSTIGIYS 8
S+T+GIYS
Sbjct: 303 STTVGIYS 310


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SSTIGIYSVE 10
+ IGIY VE
Sbjct: 665 TQNIGIYGVE 674


>sp|RPA_METTH|REPLICATION factor A|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 IGIYSVE 10
+G+YSVE
Sbjct: 486 LGLYSVE 492




623|SequenceR|3120|3111|EWVVGSSTIG

>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EWVVGSSTIG 10
+W +G TIG
Sbjct: 1010 KWEIGDETIG 1019


>sp|PNCB_METMA|NICOTINATE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EWVVGSSTI 9
EW++G+S +
Sbjct: 228 EWIMGTSAL 236


>sp|PNCB_METBU|NICOTINATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 1 EWVVGSSTI 9
EW++G+S +
Sbjct: 225 EWIMGNSAL 233


>sp|PNCB_METAC|NICOTINATE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 EWVVGSSTI 9
EW++G+S +
Sbjct: 226 EWIMGTSAL 234


>sp|GATC_METS5|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Metallosphaera sedula (strain ATCC

Query: 2 WVVGSSTIG 10
+++G STIG
Sbjct: 88 YIIGPSTIG 96


>sp|GGGPS_METJA|GERANYLGERANYLGLYCERYL phosphate synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WVVGSSTIG 10
WVV + T+G
Sbjct: 104 WVVTAPTLG 112


>sp|SYM_IGNH4|METHIONINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EWVVGSS 7
+W+VGS+
Sbjct: 3 KWIVGSA 9


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 WVVGSSTIG 10
WV S TIG
Sbjct: 90 WVTISDTIG 98


>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 WVVGSS 7
WVVGS+
Sbjct: 17 WVVGSA 22




624|SequenceR|3125|3116|QKPKVEWVVG

>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QKPKVEWVVG 10
Q P ++WVVG
Sbjct: 791 QGPVLKWVVG 800


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QKPKVEWVV 9
Q P ++WVV
Sbjct: 860 QTPVLDWVV 868


>sp|Y958_METJA|UNCHARACTERIZED protein MJ0958|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KPKVEWVV 9
+PK+ WV+
Sbjct: 397 EPKIYWVI 404


>sp|ARGC_METJA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PKVEWVVG 10
PK+ WV G
Sbjct: 277 PKLTWVRG 284


>sp|Y34A_METJA|UNCHARACTERIZED protein MJ0347.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QKPKVEWVVG 10
Q PK E VVG
Sbjct: 159 QHPKEEKVVG 168


>sp|Y785_METJA|UNCHARACTERIZED protein MJ0785|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KPKVEW 7
KPK++W
Sbjct: 358 KPKLDW 363


>sp|RL15E_THEKO|LARGE ribosomal subunit protein eL15|Thermococcus kodakarensis (strain

Query: 3 PKVEWVVG 10
PK+ W+ G
Sbjct: 144 PKIAWIAG 151


>sp|RL15E_THEGJ|LARGE ribosomal subunit protein eL15|Thermococcus gammatolerans (strain

Query: 3 PKVEWVVG 10
PK+ W+ G
Sbjct: 144 PKIAWITG 151


>sp|RL15E_THEON|LARGE ribosomal subunit protein eL15|Thermococcus onnurineus (strain NA1)

Query: 3 PKVEWVVG 10
PK+ W+ G
Sbjct: 144 PKIAWIAG 151


>sp|GLPK_HALMA|GLYCEROL kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 QKPKVEWVVG 10
++ KVEW+ G
Sbjct: 117 EEDKVEWIRG 126


>sp|SFSA_ARCFU|SUGAR fermentation stimulation protein homolog|Archaeoglobus fulgidus

Query: 3 PKVEWVVG 10
PK+ W+ G
Sbjct: 92 PKISWLDG 99


>sp|SYE_CENSY|GLUTAMATE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 3 PKVEWV 8
PK++WV
Sbjct: 489 PKMQWV 494




625|SequenceR|3130|3121|FPKWKQKPKV

>sp|MTRD_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina acetivorans (strain

Query: 2 PKWKQKPK 9
PKWK+ PK
Sbjct: 216 PKWKKWPK 223


>sp|MFNF_METJA|(4- jannaschii (strain ATCC 43067

Query: 1 FPKWKQKPKV 10
FP WK+K ++
Sbjct: 32 FPMWKKKDEL 41


>sp|Y266_ARCFU|UNCHARACTERIZED transporter AF_0266|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KWKQKPKV 10
KWK PKV
Sbjct: 56 KWKDLPKV 63


>sp|GATD_METS5|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Metallosphaera sedula (strain ATCC 51363

Query: 1 FPKWKQK 7
FP+WK +
Sbjct: 433 FPRWKHE 439


>sp|MPGS_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 WKQKPKV 10
W+ KPKV
Sbjct: 202 WRHKPKV 208


>sp|MPGS_PYRHO|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 WKQKPKV 10
W+ KPKV
Sbjct: 202 WRHKPKV 208


>sp|DNLI_METAR|DNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 FPKWKQK 7
FP+W Q+
Sbjct: 50 FPEWDQR 56


>sp|MPGS_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 4 WKQKPKV 10
W+ KPKV
Sbjct: 202 WRHKPKV 208


>sp|RL10_NATPD|LARGE ribosomal subunit protein uL10|Natronomonas pharaonis (strain

Query: 2 PKWKQK 7
P+WKQ+
Sbjct: 12 PEWKQE 17


>sp|RL10_HALMA|LARGE ribosomal subunit protein uL10|Haloarcula marismortui (strain

Query: 2 PKWKQK 7
P+WKQ+
Sbjct: 13 PEWKQE 18


>sp|YHIT_SACS2|UNCHARACTERIZED HIT-like protein SSO2163|Saccharolobus solfataricus (strain ATCC

Query: 2 PKWKQKPKV 10
P W Q P +
Sbjct: 102 PTWSQDPDI 110


>sp|SFSA_METS3|SUGAR fermentation stimulation protein homolog|Methanobrevibacter smithii

Query: 2 PKWKQKPK 9
P W+ PK
Sbjct: 191 PNWENDPK 198


>sp|Y348_THEGJ|UPF0215 protein TGAM_0348|Thermococcus gammatolerans (strain DSM 15229

Query: 1 FPKWKQKPKV 10
FP W+++ +V
Sbjct: 124 FPDWRERFEV 133


>sp|RL15E_METKA|LARGE ribosomal subunit protein eL15|Methanopyrus kandleri (strain AV19

Query: 1 FPKWKQKPKV 10
PKW++ P V
Sbjct: 30 LPKWRKGPSV 39


>sp|RL15E_METST|LARGE ribosomal subunit protein eL15|Methanosphaera stadtmanae (strain

Query: 1 FPKWKQKP 8
PKW+++P
Sbjct: 30 LPKWRRQP 37


>sp|GAD_SACS2|D-GLUCONATE/D-GALACTONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FPKWKQ 6
FP+WK+
Sbjct: 330 FPQWKR 335


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 3 KWKQKPKV 10
KW +PKV
Sbjct: 513 KWNIEPKV 520


>sp|TRIN_SULTO|PUTATIVE Tricorn-like protease N-terminal subunit|Sulfurisphaera tokodaii

Query: 1 FPKWKQKPKV 10
FP+W + K+
Sbjct: 129 FPQWSETYKI 138


>sp|TRET_THELN|TREHALOSE synthase|Thermococcus litoralis (strain ATCC 51850

Query: 4 WKQKPKV 10
WK+KP V
Sbjct: 335 WKEKPVV 341


>sp|TRET_PYRFU|TREHALOSE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 WKQKPKV 10
WK+KP V
Sbjct: 335 WKEKPVV 341




626|SequenceR|3135|3126|IQKQSFPKWK

>sp|Y1471_METMP|UNCHARACTERIZED protein MMP1471|Methanococcus maripaludis (strain DSM 14266

Query: 3 KQSFPKW 9
K++FPKW
Sbjct: 199 KENFPKW 205


>sp|DCDA_ARCFU|DIAMINOPIMELATE decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IQKQSFPKW 9
I+KQ P+W
Sbjct: 409 IEKQRLPEW 417


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 3 KQSFPKWK 10
KQ FP W+
Sbjct: 11 KQKFPSWR 18


>sp|SEPS_METLZ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 SFPKWK 10
SFP WK
Sbjct: 392 SFPAWK 397


>sp|GATD_METS5|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Metallosphaera sedula (strain ATCC 51363

Query: 6 FPKWK 10
FP+WK
Sbjct: 433 FPRWK 437


>sp|PSTK_METMP|L-SERYL-TRNA(SEC) kinase|Methanococcus maripaludis (strain DSM 14266

Query: 3 KQSFPKWK 10
++SFP WK
Sbjct: 40 RESFPVWK 47


>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 3 KQSFPKW 9
KQ FP W
Sbjct: 11 KQKFPNW 17


>sp|RL10_IGNH4|LARGE ribosomal subunit protein uL10|Ignicoccus hospitalis (strain

Query: 2 QKQSFPKWK 10
++ FP+WK
Sbjct: 12 HREKFPEWK 20


>sp|APE1_SULTO|PROBABLE aminopeptidase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 KQSFPKWK 10
K+ FP+W+
Sbjct: 305 KEIFPQWE 312


>sp|TOP6A_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 4 QSFPKWK 10
+SFP+W+
Sbjct: 320 RSFPEWQ 326


>sp|RL10E_METMA|LARGE ribosomal subunit protein uL16|Methanosarcina mazei (strain ATCC

Query: 1 IQKQSFPKWK 10
++KQ+FP K
Sbjct: 138 VEKQNFPAAK 147


>sp|PSTK_METJA|L-SERYL-TRNA(SEC) kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KQSFPKWK 10
++SFP WK
Sbjct: 40 RESFPVWK 47




627|SequenceR|3140|3131|QELLIIQKQS

***** No hits found ******


628|SequenceR|3145|3136|HKQYSQELLI

>sp|NK_METJA|NUCLEOSIDE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QYSQELLI 10
QYS+E+L+
Sbjct: 167 QYSKEMLL 174


>sp|NEP1_STAMF|RIBOSOMAL RNA small subunit methyltransferase|Staphylothermus marinus (strain

Query: 1 HKQYSQELL 9
H YSQE++
Sbjct: 188 HGDYSQEII 196




629|SequenceR|3150|3141|DRSIQHKQYS

>sp|SPCS_METKA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanopyrus kandleri (strain AV19 /

Query: 4 IQHKQY 9
IQH+QY
Sbjct: 242 IQHEQY 247


>sp|CMR1_SACS2|CRISPR system CMR subunit Cmr1|Saccharolobus solfataricus (strain ATCC

Query: 1 DRSIQHKQ 8
D+S++HKQ
Sbjct: 214 DKSLKHKQ 221


>sp|UPP_PYRAB|URACIL phosphoribosyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 DRSIQHKQY 9
DR + HK Y
Sbjct: 195 DRELDHKGY 203




630|SequenceR|3155|3146|KIWGHDRSIQ

>sp|KDPC_HALSA|POTASSIUM-TRANSPORTING ATPase KdpC subunit|Halobacterium salinarum (strain ATCC 700922

Query: 2 IWGHDR 7
IWGH+R
Sbjct: 175 IWGHER 180


>sp|KDPC_HALS3|POTASSIUM-TRANSPORTING ATPase KdpC subunit|Halobacterium salinarum (strain ATCC 29341

Query: 2 IWGHDR 7
IWGH+R
Sbjct: 175 IWGHER 180


>sp|HMGCS_SACS2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KIWGHDRSI 9
K+WG+D ++
Sbjct: 24 KMWGYDEAV 32


>sp|HMGCS_SULTO|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KIWGHDRSI 9
K+WG+D +
Sbjct: 24 KLWGYDEGV 32


>sp|HMGCS_SACI7|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 KIWGHDRSI 9
K+WG+D +
Sbjct: 24 KMWGYDEGV 32


>sp|HMGCS_SACI6|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KIWGHDRSI 9
K+WG+D +
Sbjct: 24 KMWGYDEGV 32


>sp|HMGCS_SACI4|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KIWGHDRSI 9
K+WG+D +
Sbjct: 24 KMWGYDEGV 32


>sp|HMGCS_SACI3|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 KIWGHDRSI 9
K+WG+D +
Sbjct: 24 KMWGYDEGV 32


>sp|HMGCS_SACI2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 KIWGHDRSI 9
K+WG+D +
Sbjct: 24 KMWGYDEGV 32


>sp|HMGCS_SACI1|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 KIWGHDRSI 9
K+WG+D +
Sbjct: 24 KMWGYDEGV 32


>sp|SYFB_NATPD|PHENYLALANINE--TRNA ligase beta subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 3 WGHDRSI 9
+GHDR I
Sbjct: 70 YGHDRGI 76


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 WGHD 6
WGHD
Sbjct: 111 WGHD 114


>sp|HMGCS_PYRIL|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 KIWGHD 6
KIWG D
Sbjct: 25 KIWGDD 30


>sp|HMGCS_METTL|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothermococcus thermolithotrophicus

Query: 1 KIWGHD 6
K+WG D
Sbjct: 25 KVWGKD 30


>sp|HMGCS_METST|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KIWGHD 6
K+WG D
Sbjct: 23 KVWGDD 28


>sp|HMGCS_METS3|HYDROXYMETHYLGLUTARYL-COA synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KIWGHD 6
K+WG D
Sbjct: 23 KVWGDD 28


>sp|HMGCS_METAR|HYDROXYMETHYLGLUTARYL-COA synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 KIWGHD 6
K+WG D
Sbjct: 24 KVWGDD 29


>sp|HMGCS_METBU|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 KIWGHDRSI 9
++WG D I
Sbjct: 24 RVWGDDADI 32


>sp|HEM3_PYRCJ|PROBABLE porphobilinogen deaminase|Pyrobaculum calidifontis (strain DSM

Query: 1 KIWGHD 6
K+WG D
Sbjct: 272 KLWGED 277


>sp|Y405_HALVD|PROBABLE cell surface fusion protein|Haloferax volcanii (strain ATCC 29605

Query: 2 IWGHDR 7
+W HDR
Sbjct: 205 VWVHDR 210




631|SequenceR|3160|3151|FNNDLKIWGH

>sp|KCY_THEKO|CYTIDYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 NNDLKIW 8
N DLKIW
Sbjct: 94 NADLKIW 100


>sp|KCY_PYRHO|CYTIDYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NNDLKIW 8
N DLKIW
Sbjct: 94 NADLKIW 100


>sp|KCY_PYRFU|CYTIDYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NNDLKIW 8
N DLKIW
Sbjct: 94 NADLKIW 100


>sp|KCY_PYRAB|CYTIDYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 NNDLKIW 8
N DLKIW
Sbjct: 94 NADLKIW 100


>sp|KCY_METB6|CYTIDYLATE kinase|Methanoregula boonei (strain DSM 21154

Query: 2 NNDLKIW 8
N DLKIW
Sbjct: 90 NADLKIW 96


>sp|KHSE_METM7|HOMOSERINE kinase|Methanococcus maripaludis (strain C7 /

Query: 1 FNNDLKIWG 9
+NNDL+++G
Sbjct: 211 YNNDLELFG 219


>sp|KHSE_METM6|HOMOSERINE kinase|Methanococcus maripaludis (strain C6 /

Query: 1 FNNDLKIWG 9
+NNDL+++G
Sbjct: 211 YNNDLELFG 219


>sp|KHSE_METM5|HOMOSERINE kinase|Methanococcus maripaludis (strain C5 /

Query: 1 FNNDLKIWG 9
+NNDL+++G
Sbjct: 211 YNNDLELFG 219


>sp|KCY_METMJ|CYTIDYLATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 NNDLKIW 8
N DL+IW
Sbjct: 90 NADLRIW 96


>sp|DNLJ_HALWD|DNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 NDLKIWG 9
NDL+ WG
Sbjct: 318 NDLQSWG 324


>sp|Y1488_PYRFU|UPF0128 protein PF1488|Pyrococcus furiosus (strain ATCC 43587

Query: 4 DLKIWGH 10
DLK WG+
Sbjct: 24 DLKAWGY 30


>sp|Y832_PYRAB|UPF0128 protein PYRAB08320|Pyrococcus abyssi (strain GE5 /

Query: 4 DLKIWGH 10
DLK WG+
Sbjct: 24 DLKAWGY 30


>sp|Y1314_PYRHO|UPF0128 protein PH1314|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 DLKIWGH 10
DLK WG+
Sbjct: 27 DLKAWGY 33


>sp|Y1545_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1545|Methanocaldococcus

Query: 2 NNDLKIWGH 10
N+D I+GH
Sbjct: 136 NSDTPIYGH 144


>sp|Y2294_THEKO|UPF0128 protein TK2294|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 DLKIWGH 10
DLK WG+
Sbjct: 24 DLKAWGY 30


>sp|KCY_METHJ|CYTIDYLATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 DLKIW 8
DLKIW
Sbjct: 92 DLKIW 96


>sp|ACAR_SULTO|ACRYLOYL-COENZYME A reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 DLKIWGH 10
DLKI GH
Sbjct: 275 DLKIVGH 281


>sp|Y1455_ARCFU|UNCHARACTERIZED protein AF_1455|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 NDLKIWG 9
+DL +WG
Sbjct: 19 DDLNLWG 25


>sp|TRM1_METMP|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 FNNDLKI 7
FN DLK+
Sbjct: 76 FNGDLKV 82


>sp|TRM1_METMI|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 FNNDLKI 7
FN DLK+
Sbjct: 76 FNGDLKV 82


>sp|TRM1_METM6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 FNNDLKI 7
FN DLK+
Sbjct: 76 FNGDLKV 82


>sp|TRM1_METM5|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 FNNDLKI 7
FN DLK+
Sbjct: 76 FNGDLKV 82


>sp|RSMA_SACS2|PROBABLE ribosomal RNA small subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 NNDLKI 7
NNDLK+
Sbjct: 173 NNDLKV 178


>sp|RFCL_METTH|REPLICATION factor C large subunit|Methanothermobacter thermautotrophicus

Query: 1 FNNDLKI 7
FN+DLK+
Sbjct: 93 FNHDLKL 99


>sp|HCGF_METTW|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanothermobacter

Query: 3 NDLKIWG 9
ND+K++G
Sbjct: 68 NDIKVYG 74


>sp|RL6_PICTO|LARGE ribosomal subunit protein uL6|Picrophilus torridus (strain ATCC

Query: 2 NNDLKIWG 9
NN+LKI G
Sbjct: 22 NNELKIKG 29


>sp|SYY_PYRIL|TYROSINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FNNDLKIWGH 10
+ DL++W +
Sbjct: 309 YGGDLEVWSY 318


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NNDLKIW 8
N D KIW
Sbjct: 151 NQDYKIW 157




632|SequenceR|3165|3156|DFNVEFNNDL

>sp|Y544_THEVO|UNCHARACTERIZED solute-binding protein TV0544|Thermoplasma volcanium (strain ATCC

Query: 1 DFNVEFNN 8
DFN EFNN
Sbjct: 58 DFNPEFNN 65


>sp|MTM1_METJA|TYPE II methyltransferase M.MjaI|Methanocaldococcus jannaschii (strain

Query: 1 DFNVEFNN 8
DFNVEF N
Sbjct: 294 DFNVEFIN 301


>sp|UPP_METM6|URACIL phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 DFNVEFN 7
DFN+E N
Sbjct: 117 DFNIEMN 123


>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 FNVEFNN 8
FN+EF+N
Sbjct: 91 FNIEFDN 97


>sp|RFCS1_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 FNVEFNNDL 10
FN+ FN D+
Sbjct: 234 FNLAFNGDV 242


>sp|SERC_METMA|PHOSPHOSERINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 NVEFNNDL 10
NV+F ND+
Sbjct: 129 NVDFKNDV 136


>sp|Y1147_METJA|UNCHARACTERIZED protein MJ1147|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FNVEFNND 9
+NVEFN D
Sbjct: 83 YNVEFNGD 90


>sp|PUR7_METS3|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DFNVEFNND 9
DF VEF D
Sbjct: 175 DFKVEFGKD 183


>sp|SYW_THEAC|TRYPTOPHAN--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 FNVEFNNDL 10
FN++ NDL
Sbjct: 222 FNIQLENDL 230


>sp|HDRB2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 1 DFNVEFNND 9
D N+E ND
Sbjct: 88 DANIELKND 96


>sp|SYM_HALMA|METHIONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 FNVEFNN 8
FN+EF+N
Sbjct: 92 FNIEFDN 98


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DFNVEFNNDL 10
D VEFNN +
Sbjct: 480 DLRVEFNNKV 489


>sp|TOP6A_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FNVEFNND 9
+N+EFN +
Sbjct: 39 YNIEFNEE 46


>sp|RNZ_METMP|RIBONUCLEASE Z|Methanococcus maripaludis (strain DSM 14266

Query: 2 FNVEFNNDL 10
FNVE N ++
Sbjct: 180 FNVELNGEI 188




633|SequenceR|3170|3161|EMPDKDFNVE

>sp|GSA_SULAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 MPDKDF 7
+PDKDF
Sbjct: 208 LPDKDF 213


>sp|APEH_AERPE|ACYLAMINO-ACID-RELEASING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 EMPDKDFN 8
E+P KDF+
Sbjct: 234 ELPSKDFS 241


>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 1 EMPDKDF 7
E+PDKD+
Sbjct: 553 ELPDKDY 559


>sp|Y181_METJA|UNCHARACTERIZED protein MJ0181|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EMPDKDFNV 9
E+ DKD+N+
Sbjct: 188 EIRDKDYNI 196


>sp|MFNA_PYRHO|L-ASPARTATE/L-GLUTAMATE decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EMPDKDFNVE 10
E+PD DF ++
Sbjct: 212 ELPDFDFKLK 221


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 3 PDKDFNV 9
P+KDF+V
Sbjct: 979 PEKDFHV 985


>sp|MFNA_THEKO|L-ASPARTATE decarboxylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EMPDKDFNVE 10
E+PD DF ++
Sbjct: 211 EIPDFDFRLK 220


>sp|RIBL_THEGJ|FAD synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 PDKDFNVE 10
PD++FN E
Sbjct: 102 PDQNFNCE 109


>sp|TRPB_THEAC|TRYPTOPHAN synthase beta chain|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EMPDKDFNV 9
EMPD +N+
Sbjct: 10 EMPDHWYNI 18


>sp|RIBL_PYRFU|FAD synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PDKDFNVE 10
PD+DF+ E
Sbjct: 99 PDQDFSCE 106


>sp|FSX1_NATA2|FUSEXIN 1|Natrinema altunense (strain JCM 12890

Query: 3 PDKDFNVE 10
PDK+F E
Sbjct: 196 PDKEFEAE 203


>sp|TRPB2_METAC|TRYPTOPHAN synthase beta chain 2|Methanosarcina acetivorans (strain ATCC

Query: 1 EMPDKDFNV 9
EMP K +NV
Sbjct: 22 EMPKKWYNV 30


>sp|RIBL_PYRHO|FAD synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PDKDFNVE 10
PD+DF+ E
Sbjct: 99 PDQDFDCE 106




634|SequenceR|3175|3166|IPLRMEMPDK

>sp|DPOL3_SACSH|DNA polymerase 3|Saccharolobus shibatae (strain ATCC 51178

Query: 1 IPLRMEMPDK 10
IP+RM+ P++
Sbjct: 391 IPIRMDNPNR 400


>sp|DPOL3_SACS2|DNA polymerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IPLRMEMPDK 10
IP+RM+ P++
Sbjct: 391 IPIRMDNPNR 400


>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 IPLRMEMPDK 10
+P+R E PD+
Sbjct: 675 VPVRQEWPDR 684


>sp|NIFD_METMI|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 2 PLRMEMPD 9
P R EMPD
Sbjct: 87 PTRPEMPD 94


>sp|NIFD_METMP|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 2 PLRMEMPD 9
P R EMPD
Sbjct: 87 PTRPEMPD 94


>sp|Y1499_SULAC|PROBABLE glycosyltransferase Saci_1499|Sulfolobus acidocaldarius (strain

Query: 1 IPLRMEMPD 9
IP+ +E+PD
Sbjct: 252 IPIYVEVPD 260


>sp|PCNA2_SULOH|DNA polymerase sliding clamp 2|Sulfurisphaera ohwakuensis

Query: 1 IPLRMEMP 8
IP+R+E+P
Sbjct: 226 IPMRIEVP 233


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IPLRMEMPDK 10
+P R+E+P++
Sbjct: 973 VPRRLELPER 982


>sp|RS4_PICTO|SMALL ribosomal subunit protein uS4|Picrophilus torridus (strain ATCC

Query: 2 PLRMEMP 8
PLRMEM
Sbjct: 169 PLRMEMS 175


>sp|Y1505_METJA|PUTATIVE ATP-dependent RNA helicase MJ1505|Methanocaldococcus jannaschii

Query: 1 IPLRMEMPD 9
IP+R+++P+
Sbjct: 207 IPIRIDLPN 215


>sp|AATF_DESSY|A-TYPE ATP synthase subunit F|Desulfurococcus sp. (strain SY)

Query: 1 IPLRMEMPDK 10
IP+ +++PDK
Sbjct: 69 IPIILQVPDK 78


>sp|RS15_METVS|SMALL ribosomal subunit protein uS15|Methanococcus vannielii (strain

Query: 2 PLRMEMPD 9
PLR E+P+
Sbjct: 17 PLRTEVPE 24


>sp|RS15_METM5|SMALL ribosomal subunit protein uS15|Methanococcus maripaludis (strain

Query: 2 PLRMEMPD 9
PLR E+P+
Sbjct: 17 PLRTEVPE 24


>sp|AATF_METTH|A-TYPE ATP synthase subunit F|Methanothermobacter thermautotrophicus

Query: 1 IPLRMEMPDK 10
+P+ +E+PDK
Sbjct: 72 LPMIIEIPDK 81


>sp|RS15_METMP|SMALL ribosomal subunit protein uS15|Methanococcus maripaludis (strain

Query: 2 PLRMEMPD 9
PLR E+P+
Sbjct: 17 PLRTEVPE 24


>sp|RS15_METM7|SMALL ribosomal subunit protein uS15|Methanococcus maripaludis (strain

Query: 2 PLRMEMPD 9
PLR E+P+
Sbjct: 17 PLRTEVPE 24


>sp|AATF_METST|A-TYPE ATP synthase subunit F|Methanosphaera stadtmanae (strain ATCC

Query: 1 IPLRMEMPDK 10
+P+ +E+PDK
Sbjct: 72 LPMIIEVPDK 81




635|SequenceR|3180|3171|KIPSRIPLRM

>sp|SYK_METMI|LYSINE--TRNA ligase|Methanococcus maripaludis (Methanococcus deltae)

Query: 1 KIPSRIPLRM 10
KIP R+PL++
Sbjct: 364 KIPERLPLQV 373


>sp|SYK_METMP|LYSINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KIPSRIPLRM 10
KIP R+PL++
Sbjct: 364 KIPERLPLQV 373


>sp|HERA_PYRFU|DNA double-strand break repair helicase|Pyrococcus furiosus (strain

Query: 2 IPSRIPLR 9
+P+R+P+R
Sbjct: 100 VPNRVPIR 107


>sp|Y746_HALSA|UPF0229 protein VNG_0746C|Halobacterium salinarum (strain ATCC 700922

Query: 3 PSRIPLR 9
P R+PLR
Sbjct: 240 PGRVPLR 246


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 1 KIPSRIPLRM 10
K PSRI RM
Sbjct: 589 KAPSRIGARM 598


>sp|AATA_METTP|A-TYPE ATP synthase subunit A|Methanothrix thermoacetophila (strain DSM

Query: 1 KIPSRIPLR 9
K+P IPLR
Sbjct: 198 KLPPTIPLR 206


>sp|RNJL_METJA|RNASE J-like protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KIPSRIPLR 9
KIP+ +P+R
Sbjct: 407 KIPTFVPVR 415




636|SequenceR|3185|3176|SLFDRKIPSR

>sp|DADD_METB6|5'-DEOXYADENOSINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 2 LFDRKIP 8
+FDR+IP
Sbjct: 412 MFDREIP 418


>sp|Y2061_THEKO|PUTATIVE phosphate permease TK2061|Thermococcus kodakarensis (strain ATCC

Query: 1 SLFDRKIPSR 10
S+F+RK P R
Sbjct: 165 SIFERKDPVR 174


>sp|G1PDH_THEAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 FDRKIP 8
FDRK+P
Sbjct: 110 FDRKLP 115


>sp|BAST_HALS3|TRANSDUCER protein BasT|Halobacterium salinarum (strain ATCC 29341

Query: 2 LFDRKIPSR 10
LF+R +P+R
Sbjct: 8 LFERVLPAR 16


>sp|WECB_METMP|UDP-N-ACETYLGLUCOSAMINE 2-epimerase|Methanococcus maripaludis (strain DSM 14266

Query: 3 FDRKIP 8
FDRK+P
Sbjct: 122 FDRKMP 127


>sp|WECBH_METMP|UDP-N-ACETYLGLUCOSAMINE 2-epimerase homolog|Methanococcus maripaludis (strain DSM 14266

Query: 3 FDRKIP 8
FDRK+P
Sbjct: 122 FDRKMP 127


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 FDRKIPSR 10
FDR +PSR
Sbjct: 348 FDRILPSR 355


>sp|Y175_METJA|UNCHARACTERIZED protein MJ0175|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FDRKIPS 9
FD KIPS
Sbjct: 110 FDNKIPS 116


>sp|BAX1_ARCFU|ENDONUCLEASE Bax1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LFDRKIP 8
LF RKIP
Sbjct: 362 LFSRKIP 368




637|SequenceR|3190|3181|EIQIGSLFDR

>sp|MTBC2_METAC|DIMETHYLAMINE corrinoid protein 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 QIGSLFDR 10
Q+G+LF+R
Sbjct: 50 QVGTLFER 57




638|SequenceR|3195|3186|SSQKFEIQIG

>sp|RL11_METS3|LARGE ribosomal subunit protein uL11|Methanobrevibacter smithii (strain

Query: 2 SQKFEIQIG 10
+++FEI+IG
Sbjct: 61 TKEFEIEIG 69


>sp|RL11_METJA|LARGE ribosomal subunit protein uL11|Methanocaldococcus jannaschii

Query: 2 SQKFEIQIG 10
++KFEI++G
Sbjct: 61 TRKFEIEVG 69


>sp|RL11_NITMS|LARGE ribosomal subunit protein uL11|Nitrosopumilus maritimus (strain

Query: 2 SQKFEIQIG 10
++K+EI+IG
Sbjct: 61 TKKYEIEIG 69




639|SequenceR|3200|3191|LSRQHSSQKF

>sp|PRIS_STAMF|DNA primase small subunit PriS|Staphylothermus marinus (strain ATCC

Query: 1 LSRQHSSQKF 10
+SRQ SS KF
Sbjct: 1 MSRQESSNKF 10


>sp|DCDB_METPE|DCTP deaminase, dUMP-forming|Methanosphaerula palustris (strain ATCC

Query: 1 LSRQHSSQKF 10
LSR H +Q+F
Sbjct: 175 LSRYHENQRF 184




640|SequenceR|3205|3196|YLRARLSRQH

***** No hits found ******


641|SequenceR|3210|3201|DVQLWYLRAR

>sp|OGG1_METJA|8-OXOGUANINE DNA glycosylase/AP lyase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DVQLWYLR 8
D+ +WYLR
Sbjct: 194 DLYIWYLR 201


>sp|CAS8A_METJA|CRISPR-ASSOCIATED protein Cas8a2/Csa4|Methanocaldococcus jannaschii (strain ATCC

Query: 4 LWYLRA 9
LWYL+A
Sbjct: 306 LWYLKA 311


>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 1 DVQLWYLRAR 10
D+ LW L+AR
Sbjct: 204 DMALWDLKAR 213


>sp|PELO_THEAC|PROTEIN pelota homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 LWYLR 8
LWYLR
Sbjct: 23 LWYLR 27


>sp|RL14_THEAC|LARGE ribosomal subunit protein uL14|Thermoplasma acidophilum (strain

Query: 1 DVQLWYLRAR 10
DV+ W+ +AR
Sbjct: 33 DVKAWHGKAR 42


>sp|TRM1_PYRIL|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum islandicum

Query: 4 LWYLRAR 10
+WYL+ R
Sbjct: 239 IWYLKKR 245


>sp|CAS4_HALVD|CRISPR-ASSOCIATED exonuclease Cas4|Haloferax volcanii (strain ATCC 29605

Query: 4 LWYLR 8
LWYLR
Sbjct: 111 LWYLR 115




642|SequenceR|3215|3206|GPLQNDVQLW

>sp|TRUA_HALMA|TRNA pseudouridine synthase A|Haloarcula marismortui (strain ATCC

Query: 1 GPLQNDVQLW 10
G L NDV++W
Sbjct: 81 GELPNDVRVW 90


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 QNDVQLW 10
QND+ LW
Sbjct: 270 QNDLDLW 276


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 QNDVQLW 10
QND+ LW
Sbjct: 270 QNDLDLW 276


>sp|RRP41_THEON|EXOSOME complex component Rrp41|Thermococcus onnurineus (strain NA1)

Query: 2 PLQNDVQL 9
PL+ND+ L
Sbjct: 193 PLKNDITL 200


>sp|RRP41_THEKO|EXOSOME complex component Rrp41|Thermococcus kodakarensis (strain ATCC

Query: 2 PLQNDVQL 9
PL+ND+ L
Sbjct: 193 PLKNDITL 200


>sp|RRP41_THEGJ|EXOSOME complex component Rrp41|Thermococcus gammatolerans (strain DSM

Query: 2 PLQNDVQL 9
PL+ND+ L
Sbjct: 193 PLKNDITL 200


>sp|RRP41_PYRHO|EXOSOME complex component Rrp41|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PLQNDVQL 9
PL+ND+ L
Sbjct: 193 PLKNDITL 200


>sp|RRP41_PYRAB|EXOSOME complex component Rrp41|Pyrococcus abyssi (strain GE5 /

Query: 2 PLQNDVQL 9
PL+ND+ L
Sbjct: 193 PLKNDITL 200


>sp|Y1620_METJA|UNCHARACTERIZED protein MJ1620|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GPLQNDVQL 9
GP+ ND+ +
Sbjct: 91 GPIANDINI 99


>sp|SYE_KORCO|GLUTAMATE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 PLQNDVQLW 10
P++ +++LW
Sbjct: 221 PIEKNLELW 229


>sp|NADA_HALMA|QUINOLINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 LQNDVQLW 10
++NDV LW
Sbjct: 225 VENDVILW 232


>sp|MTRH_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanopyrus kandleri (strain AV19 /

Query: 1 GPLQNDVQLW 10
GP++N +W
Sbjct: 281 GPIENAPAIW 290


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 QNDVQLW 10
Q+D++LW
Sbjct: 263 QHDLELW 269




643|SequenceR|3220|3211|VPFMAGPLQN

>sp|RRP4_PYRHO|EXOSOME complex component Rrp4|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VPFMAGPLQ 9
+PF GPL+
Sbjct: 139 MPFNGGPLK 147


>sp|RRP4_PYRFU|EXOSOME complex component Rrp4|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VPFMAGPLQ 9
+PF GPL+
Sbjct: 139 MPFNGGPLR 147


>sp|RRP4_THEKO|EXOSOME complex component Rrp4|Thermococcus kodakarensis (strain ATCC

Query: 1 VPFMAGPLQ 9
+PF GPL+
Sbjct: 139 MPFKGGPLR 147


>sp|RRP4_PYRAB|EXOSOME complex component Rrp4|Pyrococcus abyssi (strain GE5 /

Query: 1 VPFMAGPLQ 9
+PF GPL+
Sbjct: 139 MPFNGGPLK 147


>sp|Y1363_METJA|UNCHARACTERIZED protein MJ1363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FMAGPLQN 10
F+AGP++N
Sbjct: 111 FVAGPVEN 118




644|SequenceR|3225|3216|VPHFVVPFMA

>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 1 VPHFVVPFMA 10
VPH+ P MA
Sbjct: 509 VPHYPYPHMA 518


>sp|FPOH_METMA|F(420)H(2) dehydrogenase subunit H|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VPHFVVPF 8
+P F+VPF
Sbjct: 8 IPEFIVPF 15


>sp|SYK_METMP|LYSINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 HFVVPFM 9
HF++PF+
Sbjct: 104 HFLMPFL 110


>sp|SYK_METMI|LYSINE--TRNA ligase|Methanococcus maripaludis (Methanococcus deltae)

Query: 3 HFVVPFM 9
HF++PF+
Sbjct: 104 HFLMPFL 110


>sp|MFNA_METBU|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcoides burtonii

Query: 4 FVVPFM 9
FV+PFM
Sbjct: 201 FVIPFM 206


>sp|MFNA_METAR|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanocella arvoryzae (strain

Query: 4 FVVPFM 9
FV+PFM
Sbjct: 199 FVIPFM 204


>sp|EPPA_METMP|PREPILIN peptidase EppA|Methanococcus maripaludis (strain DSM 14266

Query: 1 VPHFVVPFM 9
+PHFV+ M
Sbjct: 32 IPHFVIILM 40


>sp|PTFC_HALVD|PTS system fructose-specific EIIC component|Haloferax volcanii (strain

Query: 1 VPHFVVPFM 9
VP F+ P M
Sbjct: 150 VPEFIAPMM 158


>sp|COFC_NATMM|2-PHOSPHO-L-LACTATE guanylyltransferase|Natrialba magadii (strain ATCC 43099

Query: 3 HFVVPFMA 10
H VVPF A
Sbjct: 2 HVVVPFAA 9


>sp|COFC_METB6|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanoregula boonei (strain DSM 21154

Query: 2 PHFVVPF 8
PH ++PF
Sbjct: 3 PHALIPF 9




645|SequenceR|3230|3221|SKPPAVPHFV

>sp|RTCB_NANEQ|TRNA-SPLICING ligase RtcB|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 PPAVPHFV 10
PP +P FV
Sbjct: 84 PPVIPGFV 91


>sp|SYR_METPE|ARGININE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 KPPAVPHF 9
KPP V HF
Sbjct: 350 KPPEVVHF 357


>sp|GUAAB_SACS2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 SKPPAVPHF 9
SKPPA F
Sbjct: 358 SKPPATIEF 366


>sp|SYT_METMP|THREONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SKPPAVPHFV 10
+KPPA+P ++
Sbjct: 492 NKPPALPTWL 501


>sp|SYT_METM7|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 SKPPAVPHFV 10
+KPPA+P ++
Sbjct: 492 NKPPALPTWL 501


>sp|SYT_METM5|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 SKPPAVPHFV 10
+KPPA+P ++
Sbjct: 492 NKPPALPTWL 501


>sp|GUAAB_SACI2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 SKPPAVPHF 9
SKPPA F
Sbjct: 358 SKPPATIEF 366


>sp|GUAAB_SACI7|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 SKPPAVPHF 9
SKPPA F
Sbjct: 358 SKPPATIEF 366


>sp|GUAAB_SACI6|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 SKPPAVPHF 9
SKPPA F
Sbjct: 358 SKPPATIEF 366


>sp|GUAAB_SACI4|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 SKPPAVPHF 9
SKPPA F
Sbjct: 358 SKPPATIEF 366


>sp|GUAAB_SACI3|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 SKPPAVPHF 9
SKPPA F
Sbjct: 358 SKPPATIEF 366


>sp|GUAAB_SACI1|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 SKPPAVPHF 9
SKPPA F
Sbjct: 358 SKPPATIEF 366


>sp|DLDH2_HALMA|DIHYDROLIPOYL dehydrogenase 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 SKPPAVPHF 9
S+P AVP F
Sbjct: 151 SRPMAVPGF 159


>sp|LIPB_PYRAE|PROBABLE octanoyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SKPPAVPH 8
SKPP VP
Sbjct: 203 SKPPEVPQ 210


>sp|SYT_METVS|THREONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 KPPAVPHFV 10
KPPA+P ++
Sbjct: 493 KPPALPTWL 501


>sp|GCST_THEGJ|PROBABLE aminomethyltransferase|Thermococcus gammatolerans (strain DSM

Query: 1 SKPPAV 6
SKPPA+
Sbjct: 75 SKPPAI 80


>sp|GCST_PYRHO|PROBABLE aminomethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SKPPAV 6
SKPPA+
Sbjct: 75 SKPPAI 80


>sp|GCST_PYRFU|PROBABLE aminomethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SKPPAV 6
SKPPA+
Sbjct: 75 SKPPAI 80


>sp|GCST_PYRAB|PROBABLE aminomethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 SKPPAV 6
SKPPA+
Sbjct: 75 SKPPAI 80


>sp|SYR_METLZ|ARGININE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 KPPAVPHF 9
+PP + HF
Sbjct: 347 RPPEIVHF 354


>sp|GCST_THEON|PROBABLE aminomethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 1 SKPPAV 6
SKPPA+
Sbjct: 75 SKPPAI 80


>sp|GPMI_HALSA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Halobacterium salinarum (strain ATCC 700922

Query: 1 SKPPAVP 7
+ PPAVP
Sbjct: 280 TNPPAVP 286


>sp|GCST_THEKO|PROBABLE aminomethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 SKPPAV 6
SKPPA+
Sbjct: 75 SKPPAI 80


>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 KPPAVP 7
+PPAVP
Sbjct: 358 QPPAVP 363


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 KPPAVP 7
+PPAVP
Sbjct: 358 EPPAVP 363


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 KPPAVP 7
+PPAVP
Sbjct: 358 EPPAVP 363


>sp|Y1029_THESM|UPF0282 protein TSIB_1029|Thermococcus sibiricus (strain DSM 12597

Query: 4 PAVPH 8
PAVPH
Sbjct: 154 PAVPH 158


>sp|Y379_THEGJ|UPF0282 protein TGAM_0379|Thermococcus gammatolerans (strain DSM 15229

Query: 4 PAVPH 8
PAVPH
Sbjct: 154 PAVPH 158


>sp|DAPAT_METST|LL-DIAMINOPIMELATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 KPPAVPHFV 10
K P +PH +
Sbjct: 224 KTPGIPHSI 232




646|SequenceR|3235|3226|SDLAISKPPA

>sp|RLME_THEVO|RIBOSOMAL RNA large subunit methyltransferase|Thermoplasma volcanium (strain

Query: 1 SDLAISKPPA 10
S ISKPPA
Sbjct: 170 SSYKISKPPA 179


>sp|GCST_THEGJ|PROBABLE aminomethyltransferase|Thermococcus gammatolerans (strain DSM

Query: 5 ISKPPA 10
ISKPPA
Sbjct: 74 ISKPPA 79


>sp|GCST_PYRHO|PROBABLE aminomethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 ISKPPA 10
ISKPPA
Sbjct: 74 ISKPPA 79


>sp|GCST_PYRFU|PROBABLE aminomethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 ISKPPA 10
ISKPPA
Sbjct: 74 ISKPPA 79


>sp|GCST_PYRAB|PROBABLE aminomethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 5 ISKPPA 10
ISKPPA
Sbjct: 74 ISKPPA 79


>sp|YPZ5_METTF|UNCHARACTERIZED protein ORF5'|Methanothermobacter thermautotrophicus

Query: 2 DLAISKPPA 10
DL++SKP A
Sbjct: 267 DLSVSKPRA 275


>sp|DTDA_METAC|D-AMINOACYL-TRNA deacylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DLAISKPPA 10
+LA+S PPA
Sbjct: 124 ELAVSSPPA 132


>sp|GCST_THEON|PROBABLE aminomethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 5 ISKPPA 10
ISKPPA
Sbjct: 74 ISKPPA 79


>sp|GCST_THEKO|PROBABLE aminomethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 5 ISKPPA 10
ISKPPA
Sbjct: 74 ISKPPA 79


>sp|FAU1_CALMQ|PROBABLE ribonuclease FAU-1|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 DLAISKPP 9
D+A +KPP
Sbjct: 81 DVAYNKPP 88




647|SequenceR|3240|3231|FPKPESDLAI

>sp|GLYA_METS5|SERINE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 1 FPKPESDLA 9
FP P DLA
Sbjct: 176 FPHPTKDLA 184


>sp|RL4_METMA|LARGE ribosomal subunit protein uL4|Methanosarcina mazei (strain ATCC

Query: 2 PKPESD 7
PKPE+D
Sbjct: 95 PKPEAD 100


>sp|RL4_METAC|LARGE ribosomal subunit protein uL4|Methanosarcina acetivorans (strain

Query: 2 PKPESD 7
PKPE+D
Sbjct: 95 PKPEAD 100


>sp|RL4_METBF|LARGE ribosomal subunit protein uL4|Methanosarcina barkeri (strain Fusaro

Query: 2 PKPESD 7
PKPE+D
Sbjct: 95 PKPEAD 100


>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 FPKPESDLAI 10
F PESDL +
Sbjct: 636 FKDPESDLKM 645


>sp|DP2S_ARCFU|DNA polymerase II small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 FPKPESDLAI 10
+P E DLAI
Sbjct: 286 YPGQEDDLAI 295


>sp|Y1226_ARCFU|UNCHARACTERIZED protein AF_1226|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PKPESDLAI 10
P PE D AI
Sbjct: 95 PTPEEDAAI 103


>sp|GGGPS_METST|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 FPKPESDLAI 10
P+ +SDLA+
Sbjct: 145 IPRKKSDLAV 154


>sp|HIS1_ARCFU|ATP phosphoribosyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PKPESDLAI 10
P PE+DL I
Sbjct: 114 PMPEADLII 122




648|SequenceR|3245|3236|VSVDIFPKPE

>sp|EHAA_METTM|PROBABLE [NiFe]-hydrogenase-type-3 Eha complex

Query: 4 DIFPKPE 10
DIFP+PE
Sbjct: 90 DIFPRPE 96


>sp|EHAA_METTH|PROBABLE [NiFe]-hydrogenase-type-3 Eha complex

Query: 4 DIFPKPE 10
DIFP+PE
Sbjct: 89 DIFPRPE 95


>sp|Y812_ARCFU|UNCHARACTERIZED protein AF_0812|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 IFPKPE 10
IFPKPE
Sbjct: 60 IFPKPE 65


>sp|AMPP1_ARCFU|AMP phosphorylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VDIFPKPE 10
VD+FP P+
Sbjct: 78 VDVFPSPK 85


>sp|MUTS2_PYRFU|DNA-BINDING protein MutS2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VSVDIFPK 8
+SV+IFP+
Sbjct: 256 ISVEIFPR 263


>sp|AROE_THEVO|SHIKIMATE dehydrogenase (NADP(+))|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VSVDIFPK 8
+S+DIFP+
Sbjct: 38 LSIDIFPE 45


>sp|LYSX_SULAC|ALPHA-AMINOADIPATE--LYSW ligase LysX|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VSVDIFPKPE 10
+ +DIF PE
Sbjct: 228 LGIDIFEDPE 237


>sp|MOAC_METLZ|PROBABLE cyclic pyranopterin monophosphate synthase|Methanocorpusculum

Query: 3 VDIFPKPE 10
VD+ PKP+
Sbjct: 16 VDVTPKPD 23


>sp|RS5_SACS2|SMALL ribosomal subunit protein uS5|Saccharolobus solfataricus (strain

Query: 1 VSVDIFPKPE 10
V VD+ P P+
Sbjct: 145 VEVDLLPAPK 154


>sp|RS3_ARCFU|SMALL ribosomal subunit protein uS3|Archaeoglobus fulgidus (strain ATCC

Query: 1 VSVDIFPKPE 10
VSVD KPE
Sbjct: 79 VSVDEVEKPE 88




649|SequenceR|3250|3241|NFRTIVSVDI

>sp|ARLMC_PYRAB|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus abyssi (strain

Query: 3 RTIVSVD 9
RT+VSVD
Sbjct: 129 RTVVSVD 135


>sp|CDAT8_METKA|TRNA(CYTOSINE(8)) deaminase|Methanopyrus kandleri (strain AV19 /

Query: 3 RTIVSVDI 10
RT+V+VD+
Sbjct: 259 RTVVTVDV 266




650|SequenceR|3255|3246|VKSYENFRTI

>sp|HIS6_METJA|IMIDAZOLE glycerol phosphate synthase subunit|Methanocaldococcus jannaschii

Query: 1 VKSYENFRTI 10
+KS E+FR I
Sbjct: 83 IKSIEDFRRI 92


>sp|SPSS_METVS|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VKSYENFRTI 10
V+ Y NFR I
Sbjct: 130 VEEYPNFRVI 139


>sp|SYFA_METMA|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VKSYENFRTI 10
VK E FRT+
Sbjct: 172 VKHEEKFRTV 181


>sp|TOP6B_SACS2|TYPE 2 DNA topoisomerase 6|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KSYENFRT 9
K YE+FR+
Sbjct: 301 KKYEDFRS 308


>sp|TOP6B_SACI7|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 KSYENFRT 9
K YE+FR+
Sbjct: 301 KKYEDFRS 308


>sp|TOP6B_SACI6|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.4 /

Query: 2 KSYENFRT 9
K YE+FR+
Sbjct: 301 KKYEDFRS 308


>sp|TOP6B_SACI4|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.14.25 /

Query: 2 KSYENFRT 9
K YE+FR+
Sbjct: 301 KKYEDFRS 308


>sp|TOP6B_SACI3|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.27)

Query: 2 KSYENFRT 9
K YE+FR+
Sbjct: 301 KKYEDFRS 308


>sp|TOP6B_SACI2|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 KSYENFRT 9
K YE+FR+
Sbjct: 301 KKYEDFRS 308


>sp|TOP6B_SACSH|TYPE 2 DNA topoisomerase 6|Saccharolobus shibatae (strain ATCC 51178

Query: 2 KSYENFRT 9
K YE+FR+
Sbjct: 301 KKYEDFRS 308


>sp|TOP6B_SACI1|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 KSYENFRT 9
K YE+FR+
Sbjct: 301 KKYEDFRS 308


>sp|Y980_PYRAB|UPF0282 protein PYRAB09800|Pyrococcus abyssi (strain GE5 /

Query: 2 KSYENF 7
K+YENF
Sbjct: 250 KNYENF 255




651|SequenceR|3260|3251|YKFQLVKSYE

>sp|RTCB_ARCFU|TRNA-SPLICING ligase RtcB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YKFQLVKSYE 10
YK++L KSY+
Sbjct: 13 YKWELPKSYK 22


>sp|Y1374_METJA|UNCHARACTERIZED protein MJ1374|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YKFQLVK 7
YK+QL+K
Sbjct: 260 YKYQLIK 266


>sp|IF2P_HALMA|PROBABLE translation initiation factor IF-2|Haloarcula marismortui (strain

Query: 3 FQLVKSYE 10
+QLV+SY+
Sbjct: 443 YQLVESYD 450


>sp|CS3HE_METJA|CRISPR-ASSOCIATED helicase Cas3|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KFQLVKSYE 10
KF+L+K Y+
Sbjct: 571 KFELIKEYD 579


>sp|RFCL_IGNH4|REPLICATION factor C large subunit|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 KFQLVKSY 9
K+QLVK Y
Sbjct: 411 KYQLVKKY 418


>sp|TRM56_METM5|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus maripaludis

Query: 1 YKFQLVKSY 9
+KF++VKS+
Sbjct: 58 FKFEVVKSW 66


>sp|TRM56_METM7|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus maripaludis

Query: 1 YKFQLVKSY 9
+KF++VKS+
Sbjct: 58 FKFEVVKSW 66


>sp|TRM56_METM6|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus maripaludis

Query: 1 YKFQLVKSY 9
+KF++VKS+
Sbjct: 58 FKFEVVKSW 66


>sp|TRM56_METMP|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus maripaludis

Query: 1 YKFQLVKSY 9
+KF++VKS+
Sbjct: 58 FKFEVVKSW 66




652|SequenceR|3265|3256|ILVMFYKFQL

>sp|HEM1_PICTO|GLUTAMYL-TRNA reductase|Picrophilus torridus (strain ATCC 700027

Query: 1 ILVMFYKF 8
++ MFYKF
Sbjct: 317 VIAMFYKF 324


>sp|COBS1_ARCFU|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LVMFYKFQ 9
L++FY FQ
Sbjct: 107 LILFYSFQ 114




653|SequenceR|3270|3261|LAMEQILVMF

>sp|RNP4_METHJ|RIBONUCLEASE P protein component 4|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LAMEQILVMF 10
+AME+I ++F
Sbjct: 13 IAMERISILF 22




654|SequenceR|3275|3266|GQDIKLAMEQ

>sp|NAC_METMA|NASCENT polypeptide-associated complex protein|Methanosarcina mazei

Query: 1 GQDIKLAMEQ 10
+DIKL MEQ
Sbjct: 82 AEDIKLVMEQ 91


>sp|NAC_PYRFU|NASCENT polypeptide-associated complex protein|Pyrococcus furiosus

Query: 2 QDIKLAMEQ 10
+DIKL MEQ
Sbjct: 72 EDIKLVMEQ 80


>sp|NAC_PYRHO|NASCENT polypeptide-associated complex protein|Pyrococcus horikoshii

Query: 2 QDIKLAMEQ 10
+DIKL MEQ
Sbjct: 75 EDIKLVMEQ 83


>sp|NAC_PYRAB|NASCENT polypeptide-associated complex protein|Pyrococcus abyssi (strain

Query: 2 QDIKLAMEQ 10
+DIKL MEQ
Sbjct: 72 EDIKLVMEQ 80


>sp|NAC_METAC|NASCENT polypeptide-associated complex protein|Methanosarcina acetivorans

Query: 3 DIKLAMEQ 10
DIKL MEQ
Sbjct: 77 DIKLVMEQ 84


>sp|NAC_THEAC|NASCENT polypeptide-associated complex protein|Thermoplasma acidophilum

Query: 3 DIKLAMEQ 10
DIKL MEQ
Sbjct: 83 DIKLVMEQ 90


>sp|NAC_PICTO|NASCENT polypeptide-associated complex protein|Picrophilus torridus

Query: 3 DIKLAMEQ 10
DIKL MEQ
Sbjct: 73 DIKLVMEQ 80


>sp|NAC_THEKO|NASCENT polypeptide-associated complex protein|Thermococcus kodakarensis

Query: 3 DIKLAMEQ 10
DIKL MEQ
Sbjct: 75 DIKLVMEQ 82


>sp|HJA2_METJA|PROBABLE archaeal histone 2|Methanocaldococcus jannaschii (strain ATCC

Query: 2 QDIKLAMEQ 10
+DIKLA++Q
Sbjct: 59 EDIKLALKQ 67


>sp|NAC_ARCFU|NASCENT polypeptide-associated complex protein|Archaeoglobus fulgidus

Query: 3 DIKLAMEQ 10
DIKL MEQ
Sbjct: 74 DIKLIMEQ 81


>sp|LYSJ_PYRHO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 QDIKLAME 9
QD+KLA+E
Sbjct: 348 QDVKLAIE 355


>sp|RRP42_METAC|EXOSOME complex component Rrp42|Methanosarcina acetivorans (strain ATCC

Query: 1 GQDIKLAMEQ 10
G+D+ LAM++
Sbjct: 175 GEDVPLAMKE 184


>sp|SYR_METKA|ARGININE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 GQDIKLAMEQ 10
G D KLA+EQ
Sbjct: 357 GADHKLAVEQ 366


>sp|ILVC_METPE|KETOL-ACID reductoisomerase (NADP(+))|Methanosphaerula palustris (strain ATCC

Query: 1 GQDIKLAMEQ 10
G+D ++AME+
Sbjct: 267 GEDSRIAMEE 276


>sp|GLPK1_SULAC|GLYCEROL kinase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GQDIKLAME 9
G+D+K A+E
Sbjct: 288 GKDVKYALE 296


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GQDIKLAMEQ 10
G D KLA EQ
Sbjct: 332 GSDHKLAAEQ 341


>sp|SYR_METAR|ARGININE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GQDIKLAMEQ 10
G+D KLAM++
Sbjct: 333 GEDQKLAMQR 342


>sp|NAC_THEVO|NASCENT polypeptide-associated complex protein|Thermoplasma volcanium

Query: 3 DIKLAMEQ 10
DIKL M+Q
Sbjct: 83 DIKLVMDQ 90


>sp|TPIS_THEKO|TRIOSEPHOSPHATE isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GQDIKLAME 9
G+D+K A+E
Sbjct: 188 GEDVKKALE 196


>sp|NAC_SULTO|NASCENT polypeptide-associated complex protein|Sulfurisphaera tokodaii

Query: 2 QDIKLAMEQ 10
+D+K MEQ
Sbjct: 75 EDVKFVMEQ 83


>sp|FILR1_METH6|METHANOGENESIS regulatory protein FilR1|Methanothrix harundinacea (strain 6Ac)

Query: 1 GQDIKLAM 8
G+D+KLA+
Sbjct: 210 GEDLKLAL 217




655|SequenceR|3280|3271|IAGLFGQDIK

>sp|DHQS_METM5|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 IAGLFGQDIK 10
IA LFG++IK
Sbjct: 123 IADLFGEEIK 132


>sp|DHQS_METM7|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 IAGLFGQDIK 10
IA LFG++IK
Sbjct: 123 IADLFGEEIK 132


>sp|DHQS_METM6|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 IAGLFGQDIK 10
IA LFG++IK
Sbjct: 123 IADLFGEEIK 132


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 1 IAGLFGQDI 9
IAGL+G D+
Sbjct: 213 IAGLYGADL 221


>sp|ADH_SULTO|NAD-DEPENDENT alcohol dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IAGLFGQDIK 10
+ GLFG D+K
Sbjct: 269 MVGLFGADLK 278


>sp|NIFK_METMP|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 1 IAGLFGQDIK 10
I LFGQD++
Sbjct: 373 IDALFGQDLR 382


>sp|NIFK_METMI|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 1 IAGLFGQDIK 10
I LFGQD++
Sbjct: 373 IDALFGQDLR 382


>sp|CCA_METJA|CCA-ADDING enzyme|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GLFGQDIK 10
GL+G D+K
Sbjct: 174 GLYGSDVK 181


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IAGLFGQD 8
+AGLFG D
Sbjct: 363 LAGLFGAD 370


>sp|AATC_HALSA|A-TYPE ATP synthase subunit C|Halobacterium salinarum (strain ATCC

Query: 2 AGLFGQD 8
AGLFG D
Sbjct: 21 AGLFGDD 27


>sp|AATC_HALS3|A-TYPE ATP synthase subunit C|Halobacterium salinarum (strain ATCC 29341

Query: 2 AGLFGQD 8
AGLFG D
Sbjct: 21 AGLFGDD 27


>sp|SYV_HALSA|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 LFGQDIK 10
LFGQD++
Sbjct: 246 LFGQDVE 252


>sp|SYV_HALS3|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 4 LFGQDIK 10
LFGQD++
Sbjct: 246 LFGQDVE 252


>sp|ANTRA_HALVD|PROBABLE anion import ATP-binding protein|Haloferax volcanii (strain ATCC

Query: 1 IAGLFGQD 8
+ GLFG+D
Sbjct: 150 VEGLFGRD 157


>sp|RS13_SULAC|SMALL ribosomal subunit protein uS13|Sulfolobus acidocaldarius (strain

Query: 1 IAGLFGQDI 9
I LFGQD+
Sbjct: 9 IVRLFGQDV 17


>sp|PYRB_CENSY|ASPARTATE carbamoyltransferase catalytic subunit|Cenarchaeum symbiosum

Query: 1 IAGLFGQDI 9
+AG +G+DI
Sbjct: 1 MAGFYGRDI 9


>sp|PORA_PYRAB|PYRUVATE synthase subunit PorA|Pyrococcus abyssi (strain GE5 /

Query: 1 IAGLFGQDI 9
IAGL G+D+
Sbjct: 352 IAGLGGRDV 360


>sp|RS13_SULTO|SMALL ribosomal subunit protein uS13|Sulfurisphaera tokodaii (strain

Query: 1 IAGLFGQDI 9
I LFGQD+
Sbjct: 10 IVRLFGQDV 18


>sp|MTRE_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanopyrus kandleri (strain AV19 /

Query: 2 AGLFGQ 7
AGLFGQ
Sbjct: 249 AGLFGQ 254


>sp|PORA_PYRHO|PYRUVATE synthase subunit PorA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IAGLFGQDI 9
IAGL G+D+
Sbjct: 352 IAGLGGRDV 360


>sp|ADH_SACS2|NAD-DEPENDENT alcohol dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IAGLFGQDI 9
+ GLFG D+
Sbjct: 269 MVGLFGADL 277


>sp|RL5_METBU|LARGE ribosomal subunit protein uL5|Methanococcoides burtonii (strain DSM

Query: 3 GLFGQDI 9
G+FG DI
Sbjct: 118 GIFGMDI 124


>sp|ADH_SULSR|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus sp. (strain RC3)

Query: 1 IAGLFGQDI 9
+ GLFG D+
Sbjct: 269 MVGLFGADL 277


>sp|CCA_METMP|CCA-ADDING enzyme|Methanococcus maripaludis (strain DSM 14266

Query: 3 GLFGQDIK 10
G++G D+K
Sbjct: 175 GIYGSDLK 182


>sp|CCA_METM7|CCA-ADDING enzyme|Methanococcus maripaludis (strain C7 /

Query: 3 GLFGQDIK 10
G++G D+K
Sbjct: 175 GIYGSDLK 182


>sp|CCA_METM5|CCA-ADDING enzyme|Methanococcus maripaludis (strain C5 /

Query: 3 GLFGQDIK 10
G++G D+K
Sbjct: 175 GIYGSDLK 182


>sp|RL5_METKA|LARGE ribosomal subunit protein uL5|Methanopyrus kandleri (strain AV19 /

Query: 3 GLFGQDI 9
G+FG DI
Sbjct: 134 GIFGMDI 140


>sp|REG5_PYRHO|UNCHARACTERIZED HTH-type transcriptional regulator PH1055|Pyrococcus horikoshii

Query: 1 IAGLFGQDI 9
+ G+FG+D+
Sbjct: 109 LIGVFGEDV 117


>sp|RL5_METB6|LARGE ribosomal subunit protein uL5|Methanoregula boonei (strain DSM

Query: 3 GLFGQDI 9
G+FG DI
Sbjct: 114 GIFGMDI 120




656|SequenceR|3285|3276|TFLAIIAGLF

>sp|GLCV_SACS2|GLUCOSE import ATP-binding protein GlcV|Saccharolobus solfataricus

Query: 1 TFLAIIAGL 9
TF+ IIAGL
Sbjct: 46 TFMRIIAGL 54


>sp|CBSA_SACS2|CYTOCHROME b558/566 subunit A|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TFLAIIAGL 9
+FLAII GL
Sbjct: 26 SFLAIIMGL 34


>sp|DOXD_ACIAM|THIOSULFATE dehydrogenase [quinone] large subunit|Acidianus ambivalens

Query: 1 TFLAIIAGLF 10
+++ IIAGLF
Sbjct: 91 SYIEIIAGLF 100




657|SequenceR|3290|3281|PDTTPTFLAI

>sp|QUEC_METMP|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PDTTPTFL 8
PD TP F+
Sbjct: 137 PDNTPEFI 144


>sp|QUEC_METM7|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 PDTTPTFL 8
PD TP F+
Sbjct: 137 PDNTPEFI 144


>sp|QUEC_METM6|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 PDTTPTFL 8
PD TP F+
Sbjct: 137 PDNTPEFI 144


>sp|QUEC_METM5|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 PDTTPTFL 8
PD TP F+
Sbjct: 137 PDNTPEFI 144


>sp|F16A2_HALMA|FRUCTOSE-1,6-BISPHOSPHATASE class 1 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 DTTPTFLA 9
D TPTFL
Sbjct: 260 DRTPTFLG 267


>sp|QUEC_THEKO|7-CYANO-7-DEAZAGUANINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PDTTPTFL 8
PD TP F+
Sbjct: 141 PDNTPEFV 148


>sp|GATE_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfurisphaera tokodaii (strain DSM

Query: 1 PDTTPTFLA 9
P +PTF+A
Sbjct: 497 PKVSPTFIA 505


>sp|Y523_METJA|UNCHARACTERIZED protein MJ0523|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TTPTFLAI 10
T+P FLAI
Sbjct: 126 TSPKFLAI 133


>sp|QUEC_METLZ|7-CYANO-7-DEAZAGUANINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 PDTTPTFL 8
PD TP F+
Sbjct: 133 PDCTPRFI 140


>sp|IDI2_METBF|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PDTTPT 6
PDTTP
Sbjct: 73 PDTTPV 78


>sp|AGL11_HALVD|LOW-SALT glycan biosynthesis nucleotidyltransferase Agl11|Haloferax volcanii

Query: 1 PDTTPTFLAI 10
PD PT LA+
Sbjct: 160 PDEPPTNLAL 169


>sp|IDI2_METBU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PDTTPT 6
PDTTP
Sbjct: 71 PDTTPV 76


>sp|DTDA_HALLT|D-AMINOACYL-TRNA deacylase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 DTTPTFLA 9
D TP FLA
Sbjct: 85 DETPEFLA 92




658|SequenceR|3295|3286|RREAEPDTTP

>sp|IDI2_METBU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcoides burtonii (strain DSM 6242

Query: 4 AEPDTTP 10
PDTTP
Sbjct: 69 GHPDTTP 75


>sp|IDI2_METBF|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina barkeri (strain Fusaro /

Query: 4 AEPDTTP 10
PDTTP
Sbjct: 71 GHPDTTP 77


>sp|TRMY_METKA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanopyrus kandleri

Query: 3 EAEPDTTP 10
EA+PDT P
Sbjct: 92 EADPDTEP 99




659|SequenceR|3300|3291|ILKTRRREAE

***** No hits found ******


660|SequenceR|3305|3296|DIDQQILKTR

>sp|Y675_METJA|UNCHARACTERIZED protein MJ0675|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DIDQQILK 8
DID++ILK
Sbjct: 202 DIDERILK 209




661|SequenceR|3310|3301|EANLADIDQQ

>sp|NAT_SULAC|N-ALPHA-ACETYLTRANSFERASE acidocaldarius (strain ATCC 33909

Query: 2 ANLADIDQ 9
A L+DIDQ
Sbjct: 18 ATLSDIDQ 25


>sp|PFDA_METBU|PREFOLDIN subunit alpha|Methanococcoides burtonii (strain DSM 6242

Query: 2 ANLADIDQ 9
AN+AD+D+
Sbjct: 71 ANIADVDK 78




662|SequenceR|3315|3306|STEMLEANLA

>sp|CHED_HALMA|PROBABLE chemoreceptor glutamine deamidase CheD|Haloarcula marismortui

Query: 1 STEMLEANLA 10
STE +EA +A
Sbjct: 96 STEAMEAKIA 105




663|SequenceR|3320|3311|SMDTMSTEML

>sp|MPTA2_METAR|GTP cyclohydrolase MptA 2|Methanocella arvoryzae (strain DSM 22066

Query: 1 SMDTMSTEML 10
SM TMS E+L
Sbjct: 225 SMSTMSFELL 234




664|SequenceR|3325|3316|FFSLISMDTM

>sp|RNJL_SACS2|RNASE aCSPSF2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FFSLISMDTM 10
FFSL+S+ T+
Sbjct: 17 FFSLVSIITL 26




665|SequenceR|3330|3321|IHFHEFFSLI

>sp|AATI_AERPE|A-TYPE ATP synthase subunit I|Aeropyrum pernix (strain ATCC 700893

Query: 1 IHFHEFFS 8
+HF+E+FS
Sbjct: 651 LHFYEWFS 658


>sp|Y281_PYRHO|UPF0113 protein PH0281|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 HEFFSLI 10
HEFFS++
Sbjct: 38 HEFFSIV 44


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 HFHEFFSLI 10
H+H FF+ I
Sbjct: 1361 HYHRFFNSI 1369


>sp|MCH_HALMA|MESACONYL-COA hydratase|Haloarcula marismortui (strain ATCC 43049

Query: 2 HFHEFFS 8
HF EFF+
Sbjct: 32 HFFEFFA 38


>sp|MCH_HALHT|MESACONYL-COA hydratase|Haloarcula hispanica (strain ATCC 33960

Query: 2 HFHEFFS 8
HF EFF+
Sbjct: 32 HFFEFFA 38


>sp|HIS6_SACS2|IMIDAZOLE glycerol phosphate synthase subunit|Saccharolobus solfataricus

Query: 2 HFHEFFS 8
HF+E FS
Sbjct: 209 HFYEVFS 215


>sp|CAS5_ARCFU|CRISPR-ASSOCIATED protein Cas5|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IHFHEFFS 8
+HF FFS
Sbjct: 8 LHFPSFFS 15


>sp|AATI_METJA|A-TYPE ATP synthase subunit I|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IHFHEFFS 8
+H+ EFFS
Sbjct: 663 LHYVEFFS 670


>sp|Y1109_METTH|PUTATIVE nickel insertion protein|Methanothermobacter thermautotrophicus

Query: 1 IHFHE 5
+HFHE
Sbjct: 119 VHFHE 123


>sp|Y1387_METJA|PUTATIVE nickel insertion protein|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IHFHE 5
+HFHE
Sbjct: 111 VHFHE 115


>sp|AATI_SACS2|A-TYPE ATP synthase subunit I|Saccharolobus solfataricus (strain ATCC

Query: 1 IHFHEFFS 8
+HF+E FS
Sbjct: 674 LHFYEMFS 681




666|SequenceR|3335|3326|LKVPSIHFHE

>sp|Y1109_METTH|PUTATIVE nickel insertion protein|Methanothermobacter thermautotrophicus

Query: 1 LKVPSIHFHE 10
+K+ +HFHE
Sbjct: 114 VKLDEVHFHE 123


>sp|Y1387_METJA|PUTATIVE nickel insertion protein|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LKVPSIHFHE 10
+ V ++HFHE
Sbjct: 106 VDVENVHFHE 115


>sp|COBQ_METVS|PROBABLE cobyric acid synthase|Methanococcus vannielii (strain ATCC 35089

Query: 4 PSIHFH 9
PSIHF+
Sbjct: 70 PSIHFN 75


>sp|COBQ_METM6|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C6 /

Query: 4 PSIHFH 9
PSIHF+
Sbjct: 70 PSIHFN 75


>sp|COBQ_META3|PROBABLE cobyric acid synthase|Methanococcus aeolicus (strain ATCC

Query: 4 PSIHFH 9
PSIHF+
Sbjct: 70 PSIHFN 75


>sp|RFRNP_METBU|RNA-FREE ribonuclease P|Methanococcoides burtonii (strain DSM 6242

Query: 1 LKVPSIHFHE 10
+K+PS FHE
Sbjct: 90 VKIPSHIFHE 99


>sp|RFRNP_METM6|RNA-FREE ribonuclease P|Methanococcus maripaludis (strain C6 /

Query: 1 LKVPSIHFHE 10
+K+P+ FHE
Sbjct: 91 IKIPAEIFHE 100


>sp|COFH_METMJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanoculleus marisnigri (strain ATCC

Query: 2 KVPSIHFH 9
+VP +H H
Sbjct: 136 EVPGVHIH 143


>sp|RRP4_METST|EXOSOME complex component Rrp4|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LKVPSIHF 8
+K P+IHF
Sbjct: 146 VKQPTIHF 153


>sp|PELO_METVS|PROTEIN pelota homolog|Methanococcus vannielii (strain ATCC 35089

Query: 1 LKVPSIHFHE 10
+KV + FHE
Sbjct: 65 IKVEKVSFHE 74




667|SequenceR|3340|3331|SLSLHLKVPS

>sp|HIS6_META3|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus aeolicus (strain

Query: 1 SLSLHLKVP 9
S+S H+K+P
Sbjct: 213 SISTHIKLP 221


>sp|Y1680_METJA|UNCHARACTERIZED protein MJ1680|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SLHLKVPS 10
++HLKVP+
Sbjct: 135 NIHLKVPT 142


>sp|NADE_HYPBU|NH(3)-DEPENDENT NAD(+) synthetase|Hyperthermus butylicus (strain DSM 5456

Query: 2 LSLHLKVP 9
L+LHL VP
Sbjct: 178 LALHLGVP 185




668|SequenceR|3345|3336|GGSGLSLSLH

>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 GGSGLSLSL 9
GG+GL+++L
Sbjct: 407 GGNGLTVTL 415


>sp|PYRG_PICTO|CTP synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 GGSGLSLSLH 10
G +G+S+++H
Sbjct: 309 GNTGISVNIH 318




669|SequenceR|3350|3341|KDSEEGGSGL

>sp|AROD_METS5|3-DEHYDROQUINATE dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 KDSEEGGSG 9
+D EEGG G
Sbjct: 57 RDREEGGQG 65


>sp|Y2262_NATPD|PUTATIVE heme-binding protein NP_2262A|Natronomonas pharaonis (strain ATCC

Query: 1 KDSEEGGSGL 10
KD+EEG S +
Sbjct: 53 KDAEEGASAV 62


>sp|SYTC_SACI6|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 4 EEGGSGL 10
EE GSGL
Sbjct: 154 EEAGSGL 160


>sp|SYTC_SACI3|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.27)

Query: 4 EEGGSGL 10
EE GSGL
Sbjct: 154 EEAGSGL 160


>sp|SYTC_SACI2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain L.S.2.15

Query: 4 EEGGSGL 10
EE GSGL
Sbjct: 154 EEAGSGL 160


>sp|SYTC_SACS2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus solfataricus (strain ATCC

Query: 4 EEGGSGL 10
EE GSGL
Sbjct: 154 EEAGSGL 160


>sp|SYTC_SACI7|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.G.57.14

Query: 4 EEGGSGL 10
EE GSGL
Sbjct: 154 EEAGSGL 160


>sp|SYTC_SACI4|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 4 EEGGSGL 10
EE GSGL
Sbjct: 154 EEAGSGL 160


>sp|SYTC_SACI1|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.N.15.51

Query: 4 EEGGSGL 10
EE GSGL
Sbjct: 154 EEAGSGL 160


>sp|KADA_SULTO|ADENYLATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DSEEGGSGL 10
+++EGG GL
Sbjct: 79 EAKEGGDGL 87




670|SequenceR|3355|3346|MEQKEKDSEE

>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 MEQKEKDSE 9
+E KEK+SE
Sbjct: 3 LELKEKESE 11


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 MEQKEKDSEE 10
+EQ +KD EE
Sbjct: 811 LEQTQKDIEE 820




671|SequenceR|3360|3351|SHVAFMEQKE

>sp|RIBL_METKA|FAD synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 HVAFMEQ 8
HVAF+E+
Sbjct: 18 HVAFLEE 24




672|SequenceR|3365|3356|LLLNVSHVAF

>sp|Y1602_METBF|UNCHARACTERIZED protein Mbar_A1602|Methanosarcina barkeri (strain Fusaro /

Query: 1 LLLNVSHVA 9
L+LN SH++
Sbjct: 373 LILNKSHIS 381


>sp|GCH1_CALMQ|GTP cyclohydrolase 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 LLNVSHVAF 10
+L V+HVA+
Sbjct: 80 MLGVTHVAY 88




673|SequenceR|3370|3361|AGISKLLLNV

>sp|HEM3_IGNH4|PROBABLE porphobilinogen deaminase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 AGISKLLLNV 10
AG+S+L LNV
Sbjct: 172 AGVSRLGLNV 181


>sp|DPH2_METJA|2-(3-AMINO-3-CARBOXYPROPYL)HISTIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GISKLLLN 9
ISKLLLN
Sbjct: 232 AISKLLLN 239


>sp|THIC_METB6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 AGISKLLLN 9
AGI +LL+N
Sbjct: 239 AGIQELLIN 247


>sp|PYRG_META3|CTP synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GISKLLLN 9
GI+KL++N
Sbjct: 253 GIAKLIIN 260




674|SequenceR|3375|3366|VDTLTAGISK

>sp|RAD50_THEAC|DNA double-strand break repair Rad50|Thermoplasma acidophilum (strain

Query: 1 VDTLTAGIS 9
+D+L AGIS
Sbjct: 175 IDSLQAGIS 183




675|SequenceR|3380|3371|FILDDVDTLT

>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 1 FILDDVDTLT 10
FILD+VD L+
Sbjct: 427 FILDEVDKLS 436


>sp|RL2_HALLT|LARGE ribosomal subunit protein uL2|Halorubrum lacusprofundi (strain

Query: 3 LDDVDTLT 10
L+DVDT+T
Sbjct: 33 LEDVDTIT 40


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 ILDDVDTL 9
I+DDVD+L
Sbjct: 207 IVDDVDSL 214


>sp|TFS_METTL|TRANSCRIPTION factor S|Methanothermococcus thermolithotrophicus

Query: 2 ILDDVDTL 9
+++DVDTL
Sbjct: 52 VIEDVDTL 59


>sp|DNLI_METTH|DNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 LDDVDTL 9
LDDVDT+
Sbjct: 539 LDDVDTV 545


>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 FILDDVDTLT 10
F+LD++D +T
Sbjct: 452 FVLDEIDKMT 461


>sp|CDC65_HALSA|ORC1-TYPE DNA replication protein 5|Halobacterium salinarum (strain ATCC

Query: 1 FILDDVDTL 9
FILD++D L
Sbjct: 147 FILDEIDLL 155


>sp|DNLI_METST|DNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 LDDVDTLT 10
LD+VDTL+
Sbjct: 540 LDEVDTLS 547


>sp|CDC63_SULAC|ORC1-TYPE DNA replication protein 3|Sulfolobus acidocaldarius (strain ATCC

Query: 3 LDDVDTL 9
LD+VDTL
Sbjct: 148 LDEVDTL 154


>sp|IXTPA_THEAC|DITP/XTP pyrophosphatase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 ILDDVDTLT 10
I+DDVD T
Sbjct: 95 IMDDVDDRT 103


>sp|IDI2_METMP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcus maripaludis (strain DSM 14266

Query: 3 LDDVDT 8
LDD+DT
Sbjct: 45 LDDIDT 50


>sp|CDC63_SACS2|ORC1-TYPE DNA replication protein 3|Saccharolobus solfataricus (strain ATCC

Query: 3 LDDVDTL 9
LD+VDTL
Sbjct: 149 LDEVDTL 155


>sp|CDC6N_HALMA|ORC1-TYPE DNA replication protein 14|Haloarcula marismortui (strain ATCC

Query: 1 FILDDVDTL 9
F+LD++D L
Sbjct: 147 FVLDEIDLL 155


>sp|DNLI_METTF|DNA ligase|Methanothermobacter thermautotrophicus (Methanobacterium

Query: 4 DDVDTL 9
DD+DTL
Sbjct: 540 DDIDTL 545


>sp|RNZ_PYRIL|RIBONUCLEASE Z|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FILDDVDTL 9
+I DD DTL
Sbjct: 275 YIPDDFDTL 283


>sp|CDC6_CENSY|ORC1-TYPE DNA replication protein|Cenarchaeum symbiosum (strain A)

Query: 1 FILDDVDTL 9
F++D++D L
Sbjct: 160 FVIDEIDYL 168




676|SequenceR|3385|3376|YYALKFILDD

>sp|KUP_METBF|PROBABLE potassium transport system protein|Methanosarcina barkeri (strain

Query: 1 YYALKFILDD 10
YYA++F+LD+
Sbjct: 199 YYAIRFLLDN 208


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 YYALKFILD 9
YY LKF D
Sbjct: 1232 YYGLKFTHD 1240


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 YALKFILD 9
+AL+FI+D
Sbjct: 128 FALRFIID 135


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YYALKFILD 9
YY LKF D
Sbjct: 1210 YYGLKFTHD 1218


>sp|FEN_METS3|FLAP endonuclease 1|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 YYALKFILDD 10
YY LK +LD+
Sbjct: 199 YYNLKRVLDE 208


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 2 YALKFILDD 10
YA K +LD+
Sbjct: 1098 YAFKLLLDE 1106


>sp|RPO2C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanococcus vannielii (strain ATCC

Query: 2 YALKFILDD 10
YA K +LD+
Sbjct: 587 YAFKLLLDE 595


>sp|RPO2C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 2 YALKFILDD 10
YA K +LD+
Sbjct: 580 YAFKLLLDE 588


>sp|RPO2C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 2 YALKFILDD 10
YA K +LD+
Sbjct: 579 YAFKLLLDE 587


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii (strain

Query: 2 YALKFILDD 10
YA K +LD+
Sbjct: 591 YAFKLLLDE 599


>sp|RPO2C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 2 YALKFILDD 10
YA K +LD+
Sbjct: 584 YAFKLLLDE 592


>sp|RPO2C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 2 YALKFILDD 10
YA K +LD+
Sbjct: 584 YAFKLLLDE 592


>sp|RPO2C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo2C|Archaeoglobus fulgidus (strain ATCC

Query: 2 YALKFILDD 10
YA K +LD+
Sbjct: 580 YAFKLLLDE 588


>sp|D89S1_ARCFU|DAMAGE-CONTROL phosphatase AF_1104|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YYALKFILDD 10
YY K + DD
Sbjct: 16 YYEAKLVTDD 25


>sp|DHE3_AERPE|GLUTAMATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 1 YYALKFILD 9
YYA KF+ +
Sbjct: 223 YYAAKFLAE 231


>sp|ARFB_METFA|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanocaldococcus fervens (strain

Query: 1 YYALKFILDD 10
YY L+F++++
Sbjct: 83 YYYLRFLINE 92




677|SequenceR|3390|3381|QYRIEYYALK

>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 QYRIEYY 7
+YR+EY+
Sbjct: 7 EYRLEYF 13


>sp|COFC_METAC|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QYRIEYYA 8
+YR++YY
Sbjct: 133 RYRVKYYG 140


>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YRIEYYALK 10
Y EYYALK
Sbjct: 294 YSYEYYALK 302


>sp|COFC_METMA|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QYRIEYYA 8
+YR++YY
Sbjct: 133 KYRVKYYG 140


>sp|MALE_PYRFU|MALTOTRIOSE-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QYRIEYYAL 9
QY+ YYAL
Sbjct: 156 QYKGHYYAL 164


>sp|MTAP_THEPD|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermofilum pendens (strain DSM 2475

Query: 2 YRIEYYALK 10
YR YALK
Sbjct: 68 YRANIYALK 76




678|SequenceR|3395|3386|DRKYFQYRIE

>sp|NOP10_SULTO|RIBOSOME biogenesis protein Nop10|Sulfurisphaera tokodaii (strain DSM

Query: 3 KYFQYRIE 10
KY +YRIE
Sbjct: 40 KYVKYRIE 47


>sp|IMDH_PYRHO|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RKYFQYR 8
RKY QYR
Sbjct: 376 RKYKQYR 382


>sp|IMDH_PYRFU|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RKYFQYR 8
RKY QYR
Sbjct: 376 RKYKQYR 382


>sp|IMDH_PYRAB|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 2 RKYFQYR 8
RKY QYR
Sbjct: 376 RKYKQYR 382


>sp|IMDH_METJA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RKYFQYR 8
RKY QYR
Sbjct: 381 RKYKQYR 387


>sp|HPR_METMA|PUTATIVE hypoxanthine phosphoribosyltransferase|Methanosarcina mazei

Query: 3 KYFQYRIE 10
KYF+ RIE
Sbjct: 70 KYFEARIE 77


>sp|UVRC_METMP|UVRABC system protein C|Methanococcus maripaludis (strain DSM 14266

Query: 1 DRKYFQY 7
DRKYF++
Sbjct: 266 DRKYFEF 272


>sp|NOP10_SACS2|RIBOSOME biogenesis protein Nop10|Saccharolobus solfataricus (strain ATCC

Query: 3 KYFQYRIE 10
KY +YRIE
Sbjct: 40 KYVKYRIE 47


>sp|NOP10_SACI7|RIBOSOME biogenesis protein Nop10|Saccharolobus islandicus (strain

Query: 3 KYFQYRIE 10
KY +YRIE
Sbjct: 40 KYVKYRIE 47


>sp|NOP10_SACI6|RIBOSOME biogenesis protein Nop10|Saccharolobus islandicus (strain M.16.4

Query: 3 KYFQYRIE 10
KY +YRIE
Sbjct: 40 KYVKYRIE 47


>sp|NOP10_SACI4|RIBOSOME biogenesis protein Nop10|Saccharolobus islandicus (strain M.14.25

Query: 3 KYFQYRIE 10
KY +YRIE
Sbjct: 40 KYVKYRIE 47


>sp|NOP10_SACI3|RIBOSOME biogenesis protein Nop10|Saccharolobus islandicus (strain

Query: 3 KYFQYRIE 10
KY +YRIE
Sbjct: 40 KYVKYRIE 47


>sp|NOP10_SACI2|RIBOSOME biogenesis protein Nop10|Saccharolobus islandicus (strain

Query: 3 KYFQYRIE 10
KY +YRIE
Sbjct: 40 KYVKYRIE 47


>sp|NOP10_SACI1|RIBOSOME biogenesis protein Nop10|Saccharolobus islandicus (strain

Query: 3 KYFQYRIE 10
KY +YRIE
Sbjct: 40 KYVKYRIE 47


>sp|GLMM_METMP|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain DSM 14266

Query: 2 RKYFQYRIE 10
+KYF+Y ++
Sbjct: 143 KKYFEYILQ 151


>sp|SYH_AERPE|HISTIDINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DRKYFQYRIE 10
DR+Y++Y E
Sbjct: 349 DRRYYRYAWE 358


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DRKYFQY 7
D KYF+Y
Sbjct: 673 DEKYFEY 679


>sp|GATE_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma volcanium (strain ATCC

Query: 1 DRKYFQYRIE 10
DRK+ +Y++E
Sbjct: 518 DRKFDRYQVE 527


>sp|NOP10_DESA1|RIBOSOME biogenesis protein Nop10|Desulfurococcus amylolyticus (strain DSM

Query: 3 KYFQYRIE 10
KY +YR+E
Sbjct: 41 KYVEYRLE 48




679|SequenceR|3400|3391|SWILQDRKYF

>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 SWILQDRKYF 10
+W++ DR YF
Sbjct: 532 AWVVLDRTYF 541


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 2 WILQDRKYF 10
W + DR YF
Sbjct: 592 WDMSDRLYF 600


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 WILQDRKYF 10
WILQ+ K F
Sbjct: 653 WILQEHKKF 661


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 WILQDRKYF 10
WILQ+ K F
Sbjct: 645 WILQEHKKF 653


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 WILQDRKYF 10
WILQ+ K F
Sbjct: 627 WILQEHKRF 635


>sp|SYFB_METS5|PHENYLALANINE--TRNA ligase beta subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 WILQD 6
WILQD
Sbjct: 9 WILQD 13


>sp|Y661_METTH|PUTATIVE ammonium transporter MTH_661|Methanothermobacter thermautotrophicus

Query: 2 WILQDR 7
WIL DR
Sbjct: 243 WILMDR 248


>sp|Y942_SACS2|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 3 ILQDRKY 9
IL+D+KY
Sbjct: 12 ILEDKKY 18


>sp|Y1334_SACI3|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 3 ILQDRKY 9
IL+D+KY
Sbjct: 12 ILEDKKY 18


>sp|Y1284_SACI4|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 3 ILQDRKY 9
IL+D+KY
Sbjct: 12 ILEDKKY 18


>sp|Y1268_SACI6|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 3 ILQDRKY 9
IL+D+KY
Sbjct: 12 ILEDKKY 18


>sp|Y1579_SACI1|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 3 ILQDRKY 9
IL+D+KY
Sbjct: 12 ILEDKKY 18


>sp|Y1371_SACI2|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 3 ILQDRKY 9
IL+D+KY
Sbjct: 12 ILEDKKY 18


>sp|Y1269_SACI7|PUTATIVE HTH-type transcriptional regulatory protein|Saccharolobus

Query: 3 ILQDRKY 9
IL+D+KY
Sbjct: 12 ILEDKKY 18


>sp|TRUA_METTP|TRNA pseudouridine synthase A|Methanothrix thermoacetophila (strain

Query: 2 WILQDRKYF 10
WI +DR Y
Sbjct: 64 WIEEDRAYL 72




680|SequenceR|3405|3396|YHRVVSWILQ

>sp|TRM1_METPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaerula palustris

Query: 1 YHRVVSWI 8
YHR+ WI
Sbjct: 317 YHRIAKWI 324


>sp|FWDA_METJA|PROTEIN FwdA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YHRVVSWIL 9
Y RV++W++
Sbjct: 394 YPRVIAWLM 402


>sp|TRUB_AERPE|PROBABLE tRNA pseudouridine synthase B|Aeropyrum pernix (strain ATCC

Query: 2 HRVVSWI 8
H VV+WI
Sbjct: 70 HEVVAWI 76


>sp|PCKG_THEAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 RVVSWIL 9
RV+ WIL
Sbjct: 505 RVIEWIL 511


>sp|TRUB_METKA|PROBABLE tRNA pseudouridine synthase B|Methanopyrus kandleri (strain AV19

Query: 2 HRVVSWI 8
H VV+W+
Sbjct: 58 HEVVAWV 64


>sp|TRUB_PYRFU|PROBABLE tRNA pseudouridine synthase B|Pyrococcus furiosus (strain ATCC

Query: 2 HRVVSWI 8
H VV+WI
Sbjct: 60 HEVVAWI 66


>sp|TRUB_PYRAB|PROBABLE tRNA pseudouridine synthase B|Pyrococcus abyssi (strain GE5 /

Query: 2 HRVVSWI 8
H VV+WI
Sbjct: 60 HEVVAWI 66


>sp|TRUB_THEGJ|PROBABLE tRNA pseudouridine synthase B|Thermococcus gammatolerans (strain

Query: 2 HRVVSWI 8
H VV+WI
Sbjct: 60 HEVVAWI 66


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 HRVVSW 7
HRVV+W
Sbjct: 175 HRVVNW 180


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 HRVVSW 7
HRVV+W
Sbjct: 175 HRVVNW 180


>sp|TRUB_PYRHO|PROBABLE tRNA pseudouridine synthase B|Pyrococcus horikoshii (strain ATCC

Query: 2 HRVVSWI 8
H VV+WI
Sbjct: 60 HEVVAWI 66


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 2 HRVVSWILQ 10
+RV WIL+
Sbjct: 340 YRVPGWILE 348


>sp|TRUB_NANEQ|PROBABLE tRNA pseudouridine synthase B|Nanoarchaeum equitans (strain

Query: 2 HRVVSWI 8
H+VV+W+
Sbjct: 72 HQVVAWV 78


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 HRVVSWILQ 10
H + WILQ
Sbjct: 640 HEIDKWILQ 648


>sp|TRUB_THEON|PROBABLE tRNA pseudouridine synthase B|Thermococcus onnurineus (strain

Query: 2 HRVVSWI 8
H VV+W+
Sbjct: 60 HEVVAWV 66


>sp|TRUB_THEKO|PROBABLE tRNA pseudouridine synthase B|Thermococcus kodakarensis (strain

Query: 2 HRVVSWI 8
H VV+W+
Sbjct: 60 HEVVAWV 66




681|SequenceR|3410|3401|LFQESYHRVV

>sp|DTDA_CALMQ|D-AMINOACYL-TRNA deacylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 LFQESYHRV 9
LF+E+Y R+
Sbjct: 114 LFREAYRRI 122


>sp|SYR_THESM|ARGININE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 LFQESYHRV 9
+F+ESY R+
Sbjct: 289 IFEESYKRI 297


>sp|PCKA_AERPE|PHOSPHOENOLPYRUVATE carboxykinase (ATP)|Aeropyrum pernix (strain ATCC 700893

Query: 1 LFQESYHRVV 10
L+ ESY RVV
Sbjct: 456 LYGESYVRVV 465


>sp|RSGA_METAC|SMALL ribosomal subunit biogenesis GTPase|Methanosarcina acetivorans

Query: 4 ESYHRV 9
ESYHR+
Sbjct: 324 ESYHRL 329


>sp|BIOW_METRM|6-CARBOXYHEXANOATE--COA ligase|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 3 QESYHRV 9
+E+YHR+
Sbjct: 207 KENYHRI 213


>sp|AATB_NATPD|A-TYPE ATP synthase subunit B|Natronomonas pharaonis (strain ATCC 35678

Query: 2 FQESYHRVV 10
F+E YH +V
Sbjct: 243 FEEGYHVLV 251


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LFQESY 6
LFQESY
Sbjct: 734 LFQESY 739


>sp|Y182_METJA|UNCHARACTERIZED protein MJ0182|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QESYHRVV 10
+ESYH+ V
Sbjct: 118 EESYHKKV 125




682|SequenceR|3415|3406|VYMQKLFQES

>sp|GLKA_THESM|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 VYMQKLFQES 10
VYM+K F+ES
Sbjct: 217 VYMRKEFKES 226


>sp|G3P_METFO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium formicicum

Query: 2 YMQKLFQES 10
YMQ + QES
Sbjct: 296 YMQAIHQES 304


>sp|G3P_METBR|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium bryantii

Query: 2 YMQKLFQES 10
YMQ + QES
Sbjct: 296 YMQAIHQES 304


>sp|G3P_METTH|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 YMQKLFQES 10
YMQ + QES
Sbjct: 295 YMQAVHQES 303


>sp|G3P_METST|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 YMQKLFQES 10
YMQ + QES
Sbjct: 295 YMQAVHQES 303


>sp|G3P_METS3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 YMQKLFQES 10
YMQ + QES
Sbjct: 296 YMQAVHQES 304


>sp|G3P_METFE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermus fervidus

Query: 2 YMQKLFQES 10
YMQ + QES
Sbjct: 294 YMQAVHQES 302


>sp|RPO3_PICTO|DNA-DIRECTED RNA polymerase subunit Rpo3|Picrophilus torridus (strain ATCC

Query: 2 YMQKLFQE 9
Y+Q+LF E
Sbjct: 215 YLQQLFDE 222


>sp|DMRX_METMA|DIHYDROMETHANOPTERIN reductase (acceptor)|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 YMQKLFQES 10
Y++++F+ES
Sbjct: 65 YLEEIFRES 73


>sp|ABLB_METMP|BETA-LYSINE N(6)-acetyltransferase|Methanococcus maripaludis (strain DSM

Query: 2 YMQKLFQES 10
+M K F+ES
Sbjct: 83 FMSKFFEES 91




683|SequenceR|3420|3411|LGLVLVYMQK

>sp|Y1111_HALSA|UNCHARACTERIZED GTP-binding protein VNG_1111G|Halobacterium salinarum (strain ATCC

Query: 1 LGLVLVYMQK 10
LGL+ +YM K
Sbjct: 292 LGLIRIYMDK 301




684|SequenceR|3425|3416|NGLVDLGLVL

>sp|HMGCS_METMA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NGLVDLGLVL 10
+G+VDLGL +
Sbjct: 129 SGMVDLGLAI 138


>sp|HMGCS_METTP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 NGLVDLGLVL 10
+G++DLGL +
Sbjct: 128 SGMIDLGLAI 137


>sp|HMGCS_METAC|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NGLVDLGLVL 10
+G++DLGL +
Sbjct: 129 SGMIDLGLAI 138


>sp|HMGCS_METBU|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 NGLVDLGLVL 10
+G+VDLG+ +
Sbjct: 129 SGMVDLGMAI 138


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 NGLVDLGLV 9
NG+VDL L+
Sbjct: 842 NGIVDLVLI 850


>sp|HMGCS_METBF|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NGLVDLGLVL 10
+G++DLG+ +
Sbjct: 129 SGMIDLGMAI 138




685|SequenceR|3430|3421|ILGFPNGLVD

>sp|Y285_METS3|UPF0179 protein Msm_0285|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 FPNGLVD 10
FP GLVD
Sbjct: 107 FPEGLVD 113


>sp|Y1403_METJA|UNCHARACTERIZED protein MJ1403|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LGFPNG 7
LG+PNG
Sbjct: 103 LGYPNG 108


>sp|CAPPA_PYRAR|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LGFPNGLVD 10
+GFP L+D
Sbjct: 360 MGFPPTLID 368


>sp|PANB_SACI1|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 1 ILGFPNGL 8
+LG+PN L
Sbjct: 51 VLGYPNTL 58


>sp|DEOC_HALWD|DEOXYRIBOSE-PHOSPHATE aldolase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ILGFPNG 7
++GFP+G
Sbjct: 64 VIGFPHG 70


>sp|DEOC_HALSA|DEOXYRIBOSE-PHOSPHATE aldolase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ILGFPNG 7
++GFP+G
Sbjct: 61 VIGFPHG 67


>sp|DEOC_HALS3|DEOXYRIBOSE-PHOSPHATE aldolase|Halobacterium salinarum (strain ATCC 29341

Query: 1 ILGFPNG 7
++GFP+G
Sbjct: 61 VIGFPHG 67


>sp|Y356_METJA|UNCHARACTERIZED protein MJ0356|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILGFPNGLVD 10
I FPN ++D
Sbjct: 68 ITDFPNKIID 77


>sp|NADE_THESM|NH(3)-DEPENDENT NAD(+) synthetase|Thermococcus sibiricus (strain DSM 12597

Query: 1 ILGFPNGLVD 10
ILG PN +++
Sbjct: 171 ILGVPNEIIN 180


>sp|CBIX_ARCFU|SIROHYDROCHLORIN cobaltochelatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ILGFPNG 7
+LGFP G
Sbjct: 82 LLGFPRG 88


>sp|Y436_PYRFU|KELCH domain-containing protein PF0436|Pyrococcus furiosus (strain ATCC

Query: 2 LGFPNGLV 9
LGFP G V
Sbjct: 191 LGFPEGFV 198


>sp|Y1030_METLZ|UPF0210 protein Mlab_1030|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LGFPNGLVD 10
LG P G+VD
Sbjct: 267 LGIPFGIVD 275


>sp|Y2657_METHJ|UPF0210 protein Mhun_2657|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LGFPNGLVD 10
LG P G+VD
Sbjct: 267 LGVPFGIVD 275


>sp|RNP2_METMA|RIBONUCLEASE P protein component 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ILGFPNG 7
+LGF NG
Sbjct: 54 VLGFENG 60


>sp|Y2269_METMJ|UPF0210 protein Memar_2269|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LGFPNGLVD 10
LG P G+VD
Sbjct: 267 LGIPFGIVD 275


>sp|DEOC_HALLT|DEOXYRIBOSE-PHOSPHATE aldolase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 ILGFPNG 7
++GFP+G
Sbjct: 61 VVGFPHG 67




686|SequenceR|3435|3426|ESLGRILGFP

>sp|Y236_METTH|UNCHARACTERIZED protein MTH_236|Methanothermobacter thermautotrophicus (strain

Query: 1 ESLGRILGFP 10
E++GR+LG+P
Sbjct: 76 ENIGRLLGYP 85


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 ESLGRILGFP 10
E +GR+LG P
Sbjct: 440 EEVGRVLGVP 449


>sp|TIAS_ARCFU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Archaeoglobus fulgidus

Query: 3 LGRILGFP 10
LG+++GFP
Sbjct: 33 LGKVIGFP 40


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ESLGRILGFP 10
E RI+GFP
Sbjct: 75 ELFKRIIGFP 84


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 3 LGRILGF 9
LGRI+GF
Sbjct: 842 LGRIVGF 848


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 3 LGRILGF 9
LGRI+GF
Sbjct: 868 LGRIIGF 874


>sp|IDI2_THEVO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 LGRILGFP 10
LG+ LGFP
Sbjct: 50 LGKHLGFP 57


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 3 LGRILGF 9
LGRI+GF
Sbjct: 858 LGRIIGF 864


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 3 LGRILGF 9
LGRI+GF
Sbjct: 818 LGRIIGF 824


>sp|Y317_METJA|UNCHARACTERIZED protein MJ0317|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LGRILGF 9
LGR+LGF
Sbjct: 109 LGRLLGF 115


>sp|UPP_SACS2|URACIL phosphoribosyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 3 LGRILGF 9
LGRILG+
Sbjct: 35 LGRILGY 41


>sp|UPP_SACI7|URACIL phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 3 LGRILGF 9
LGRILG+
Sbjct: 35 LGRILGY 41


>sp|UPP_SACI6|URACIL phosphoribosyltransferase|Saccharolobus islandicus (strain M.16.4

Query: 3 LGRILGF 9
LGRILG+
Sbjct: 35 LGRILGY 41


>sp|UPP_SACI4|URACIL phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 3 LGRILGF 9
LGRILG+
Sbjct: 35 LGRILGY 41


>sp|UPP_SACI3|URACIL phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 3 LGRILGF 9
LGRILG+
Sbjct: 35 LGRILGY 41


>sp|UPP_SACI2|URACIL phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 3 LGRILGF 9
LGRILG+
Sbjct: 35 LGRILGY 41


>sp|UPP_SACI1|URACIL phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 3 LGRILGF 9
LGRILG+
Sbjct: 35 LGRILGY 41


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ESLGRILG 8
E++GR+LG
Sbjct: 685 ETMGRLLG 692


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 RILGFP 10
R+LGFP
Sbjct: 82 RLLGFP 87


>sp|ATGT_AERPE|TRNA-GUANINE(15) transglycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 5 RILGFP 10
RILGFP
Sbjct: 74 RILGFP 79


>sp|ASPGP_PYRAB|PLANT-TYPE L-asparaginase|Pyrococcus abyssi (strain GE5 /

Query: 3 LGRILGFP 10
RI+GFP
Sbjct: 123 FARIMGFP 130


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 LGRILGF 9
+GRI+GF
Sbjct: 938 IGRIIGF 944


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 2 SLGRILGF 9
+L RILGF
Sbjct: 247 TLARILGF 254


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 3 LGRILGF 9
+GRI+GF
Sbjct: 802 VGRIIGF 808


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 3 LGRILGF 9
LGR++GF
Sbjct: 870 LGRLIGF 876


>sp|SYFB_METBU|PHENYLALANINE--TRNA ligase beta subunit|Methanococcoides burtonii (strain DSM 6242

Query: 1 ESLGRILGFP 10
+S G++L FP
Sbjct: 197 DSEGKVLSFP 206


>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SLGRILGF 9
+L RILGF
Sbjct: 252 TLARILGF 259


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 LGRILGF 9
+GRI+GF
Sbjct: 965 VGRIIGF 971


>sp|NADE_SULAC|NH(3)-DEPENDENT NAD(+) synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 LGRILGFP 10
LGR LG P
Sbjct: 177 LGRYLGVP 184


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 3 LGRILGF 9
+GRI+GF
Sbjct: 808 VGRIIGF 814


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 3 LGRILGF 9
LGR++GF
Sbjct: 866 LGRLIGF 872


>sp|GATA_CENSY|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Cenarchaeum symbiosum (strain A)

Query: 1 ESLGRILGFP 10
E +GR LG P
Sbjct: 61 EKVGRCLGAP 70


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 3 LGRILGF 9
LGR++GF
Sbjct: 872 LGRLIGF 878


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ESLGRILGF 9
ESL ++LG+
Sbjct: 1127 ESLAKLLGY 1135


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 LGRILGF 9
+GRI+GF
Sbjct: 929 VGRIIGF 935


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 LGRILGF 9
+GRI+GF
Sbjct: 803 VGRIIGF 809


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 3 LGRILGF 9
+GRI+GF
Sbjct: 926 VGRIIGF 932


>sp|SYFB_HALMA|PHENYLALANINE--TRNA ligase beta subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 ESLGRILGF 9
+ +GR LGF
Sbjct: 356 DDIGRALGF 364


>sp|PYRB_CALMQ|ASPARTATE carbamoyltransferase catalytic subunit|Caldivirga maquilingensis

Query: 4 GRILGF 9
GR+LGF
Sbjct: 69 GRVLGF 74


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LGRILGF 9
+GRI+GF
Sbjct: 927 VGRIIGF 933


>sp|UPP_SULTO|URACIL phosphoribosyltransferase|Sulfurisphaera tokodaii (strain DSM

Query: 3 LGRILGF 9
LGRI+G+
Sbjct: 35 LGRIIGY 41


>sp|UPP_SULAC|URACIL phosphoribosyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 3 LGRILGF 9
LGRI+G+
Sbjct: 35 LGRIIGY 41


>sp|UPP_PYRAE|URACIL phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC

Query: 3 LGRILGF 9
LGRI+G+
Sbjct: 35 LGRIIGY 41


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 3 LGRILGF 9
LGR++GF
Sbjct: 865 LGRLIGF 871


>sp|UPP_PYRAR|URACIL phosphoribosyltransferase|Pyrobaculum arsenaticum (strain DSM

Query: 3 LGRILGF 9
LGRI+G+
Sbjct: 35 LGRIIGY 41




687|SequenceR|3440|3431|LAEVGESLGR

>sp|AATD_PYRAB|A-TYPE ATP synthase subunit D|Pyrococcus abyssi (strain GE5 /

Query: 1 LAEVGESLGR 10
LAEV ESL R
Sbjct: 147 LAEVEESLKR 156


>sp|AATD_PYRHO|A-TYPE ATP synthase subunit D|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LAEVGESLGR 10
LAEV ESL R
Sbjct: 147 LAEVEESLKR 156


>sp|AATD_PYRFU|A-TYPE ATP synthase subunit D|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LAEVGESLGR 10
LAEV ESL R
Sbjct: 147 LAEVEESLKR 156


>sp|LIPA_METAR|LIPOYL synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LAEVGESLG 9
LAE G SLG
Sbjct: 258 LAEYGRSLG 266


>sp|SYFB_SACS2|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LAEVGESLGR 10
LAE G ++GR
Sbjct: 242 LAEAGGTIGR 251


>sp|PXPA_THEKO|5-OXOPROLINASE subunit A|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 AEVGESLGR 10
A++GES GR
Sbjct: 7 ADLGESFGR 15


>sp|SYFB_SACI6|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LAEVGESLGR 10
LAE G ++GR
Sbjct: 242 LAEAGGTIGR 251


>sp|SYFB_SACI4|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LAEVGESLGR 10
LAE G ++GR
Sbjct: 242 LAEAGGTIGR 251


>sp|SYFB_SACI3|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.16.27)

Query: 1 LAEVGESLGR 10
LAE G ++GR
Sbjct: 242 LAEAGGTIGR 251


>sp|SYFB_SULTO|PHENYLALANINE--TRNA ligase beta subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LAEVGESLGR 10
LAE+G +GR
Sbjct: 245 LAEMGGKIGR 254


>sp|SYFB_SACI2|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LAEVGESLGR 10
LAE G ++GR
Sbjct: 242 LAEAGGTIGR 251


>sp|SYFB_SACI7|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LAEVGESLGR 10
LAE G ++GR
Sbjct: 242 LAEAGGTIGR 251


>sp|SYFB_SACI1|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LAEVGESLGR 10
LAE G ++GR
Sbjct: 242 LAEAGGTIGR 251


>sp|UVRC_METHJ|UVRABC system protein C|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LAEVGESL 8
LAE+GE+L
Sbjct: 354 LAELGEAL 361


>sp|G6PI_METJA|GLUCOSE-6-PHOSPHATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VGESLGR 10
+GESLG+
Sbjct: 259 IGESLGK 265


>sp|RL1_THEVO|LARGE ribosomal subunit protein uL1|Thermoplasma volcanium (strain ATCC

Query: 1 LAEVGESLGR 10
+A +G+SLG+
Sbjct: 112 MANIGKSLGQ 121


>sp|Y1182_METJA|UNCHARACTERIZED protein MJ1182|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LAEVGESLG 9
+A VGES+G
Sbjct: 273 VAGVGESIG 281


>sp|RL1_THEAC|LARGE ribosomal subunit protein uL1|Thermoplasma acidophilum (strain ATCC

Query: 1 LAEVGESLGR 10
+A +G+SLG+
Sbjct: 112 MANIGKSLGQ 121


>sp|PXPA_THESM|5-OXOPROLINASE subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 2 AEVGESLGR 10
+++GES GR
Sbjct: 7 SDLGESFGR 15


>sp|PXPA_PYRHO|5-OXOPROLINASE subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 AEVGESLGR 10
+++GES GR
Sbjct: 7 SDLGESFGR 15




688|SequenceR|3445|3436|FPEYFLAEVG

>sp|Y358_PYRHO|UPF0216 protein PH0358|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FPEYFLAEV 9
P Y+LAE+
Sbjct: 112 LPRYYLAEI 120


>sp|G3P_PYRIL|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PEYFLAEVG 10
P FLA+VG
Sbjct: 246 PRIFLADVG 254


>sp|G3P_PYRCJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PEYFLAEVG 10
P FLA+VG
Sbjct: 246 PRIFLADVG 254


>sp|G3P_PYRNV|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PEYFLAEVG 10
P FLA+VG
Sbjct: 246 PRIFLADVG 254


>sp|G3P_PYRAE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PEYFLAEVG 10
P FLA+VG
Sbjct: 246 PRIFLADVG 254


>sp|G3P_PYRAR|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PEYFLAEVG 10
P FLA+VG
Sbjct: 246 PRIFLADVG 254


>sp|RPO3_METKA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanopyrus kandleri (strain AV19 /

Query: 1 FPEYFLAEVG 10
FP+ + EVG
Sbjct: 127 FPDTLITEVG 136


>sp|Y1334_METJA|PUTATIVE UTP--glucose-1-phosphate uridylyltransferase|Methanocaldococcus

Query: 3 EYFLAEVG 10
EYF+A VG
Sbjct: 122 EYFIAMVG 129




689|SequenceR|3450|3441|QVAGQFPEYF

>sp|RL11_META3|LARGE ribosomal subunit protein uL11|Methanococcus aeolicus (strain ATCC

Query: 3 AGQFPEYF 10
AG+F EYF
Sbjct: 151 AGEFDEYF 158


>sp|RL11_METMP|LARGE ribosomal subunit protein uL11|Methanococcus maripaludis (strain

Query: 3 AGQFPEYF 10
AGQF YF
Sbjct: 151 AGQFDSYF 158


>sp|TRUD_PYRAB|PROBABLE tRNA pseudouridine synthase D|Pyrococcus abyssi (strain GE5 /

Query: 1 QVAGQFPEYF 10
++ G FP YF
Sbjct: 146 KIKGGFPNYF 155


>sp|AGLB2_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QVAGQFPEY 9
Q+AG PEY
Sbjct: 541 QIAGYSPEY 549


>sp|ARCSA_METAC|ARCHAEOSINE synthase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 2 VAGQFPEY 9
V G+FP+Y
Sbjct: 515 VKGRFPKY 522


>sp|RL11_METM5|LARGE ribosomal subunit protein uL11|Methanococcus maripaludis (strain C5

Query: 3 AGQFPEYF 10
AGQF YF
Sbjct: 151 AGQFDSYF 158


>sp|RL11_METM7|LARGE ribosomal subunit protein uL11|Methanococcus maripaludis (strain C7

Query: 3 AGQFPEYF 10
AGQF YF
Sbjct: 151 AGQFDSYF 158


>sp|RL11_METM6|LARGE ribosomal subunit protein uL11|Methanococcus maripaludis (strain C6

Query: 3 AGQFPEYF 10
AGQF YF
Sbjct: 151 AGQFDSYF 158


>sp|CAPPA_SULAC|PHOSPHOENOLPYRUVATE carboxylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QVAGQFPEYF 10
++ Q+PE+F
Sbjct: 64 KLLSQYPEFF 73


>sp|TRUD_THEAC|PROBABLE tRNA pseudouridine synthase D|Thermoplasma acidophilum (strain ATCC

Query: 4 GQFPEYF 10
G FP YF
Sbjct: 149 GGFPNYF 155


>sp|TRUD_THESM|PROBABLE tRNA pseudouridine synthase D|Thermococcus sibiricus (strain DSM

Query: 4 GQFPEYF 10
G FP YF
Sbjct: 163 GGFPNYF 169


>sp|RL11_METVS|LARGE ribosomal subunit protein uL11|Methanococcus vannielii (strain ATCC

Query: 3 AGQFPEYF 10
AG+F YF
Sbjct: 151 AGEFDSYF 158


>sp|TRUD_PYRHO|PROBABLE tRNA pseudouridine synthase D|Pyrococcus horikoshii (strain ATCC

Query: 4 GQFPEYF 10
G FP YF
Sbjct: 151 GGFPNYF 157




690|SequenceR|3455|3446|FEEPGQVAGQ

>sp|Y957_METJA|UNCHARACTERIZED protein MJ0957|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FEEPGQVA 8
FE PGQV+
Sbjct: 158 FESPGQVS 165


>sp|AROB_AERPE|3-DEHYDROQUINATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 EPGQVAGQ 10
EPG VAGQ
Sbjct: 166 EPGIVAGQ 173


>sp|RIFK_HALSA|RIBOFLAVIN kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 FEEPGQVA 8
FE+PG++A
Sbjct: 94 FEDPGELA 101


>sp|SYT_NANEQ|THREONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 FEEPGQV 7
FE+PG+V
Sbjct: 344 FEQPGEV 350


>sp|RL7A_PYRAE|LARGE ribosomal subunit protein eL8|Pyrobaculum aerophilum (strain ATCC

Query: 3 EPGQVAGQ 10
EPGQ AG+
Sbjct: 118 EPGQAAGE 125


>sp|RL7A_PYRNV|LARGE ribosomal subunit protein eL8|Pyrobaculum neutrophilum (strain DSM

Query: 3 EPGQVAGQ 10
EPGQ AG+
Sbjct: 118 EPGQAAGE 125


>sp|RFHPS_METTH|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Methanothermobacter thermautotrophicus

Query: 2 EEPGQVAG 9
E+PG VAG
Sbjct: 297 EKPGNVAG 304


>sp|TRMBR_HALSA|HTH-TYPE sugar sensing transcriptional regulator|Halobacterium salinarum

Query: 1 FEEPGQVA 8
FEE G+VA
Sbjct: 306 FEESGEVA 313


>sp|KATG_METAC|CATALASE-PEROXIDASE acetivorans (strain ATCC 35395

Query: 1 FEEPGQVA 8
+E PGQ+A
Sbjct: 394 YENPGQLA 401


>sp|SYC_HALSA|CYSTEINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 FEEPGQVAGQ 10
FEE G ++GQ
Sbjct: 151 FEEYGALSGQ 160


>sp|TRPD_AERPE|ANTHRANILATE phosphoribosyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 EEPGQVAG 9
E+PG+V G
Sbjct: 56 EQPGEVVG 63




691|SequenceR|3460|3451|VLGEAFEEPG

>sp|HIS8_METTH|HISTIDINOL-PHOSPHATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 VLGEAFEEPG 10
VLG F EPG
Sbjct: 107 VLGRTFLEPG 116


>sp|HIS7_SULTO|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VLGEAFEE 8
V+GEAF+E
Sbjct: 75 VIGEAFKE 82


>sp|SYDND_METKA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 LGEAFEEP 9
LGE FEEP
Sbjct: 313 LGEIFEEP 320


>sp|SYDND_HALSA|ASPARTATE--TRNA(ASP/ASN) ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VLGEAFEEPG 10
+LGE FEE G
Sbjct: 312 LLGEYFEEQG 321


>sp|KHSE_METAR|HOMOSERINE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 VLGEAFEEPG 10
V+G A E PG
Sbjct: 21 VMGIALESPG 30


>sp|PURL_THESM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus sibiricus (strain DSM 12597

Query: 1 VLGEAFEEP 9
V+GE EEP
Sbjct: 326 VVGETIEEP 334


>sp|PURL_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VLGEAFEEP 9
V+GE EEP
Sbjct: 326 VVGEVIEEP 334


>sp|Y706_METBF|UPF0288 protein Mbar_A0706|Methanosarcina barkeri (strain Fusaro /

Query: 1 VLGEAFEEPG 10
+LG +FEE G
Sbjct: 328 LLGHSFEEAG 337


>sp|PURL_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VLGEAFEEP 9
V+GE EEP
Sbjct: 326 VVGEVIEEP 334


>sp|GATA_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 1 VLGEAFEEP 9
++G+ F+EP
Sbjct: 444 IMGKPFDEP 452


>sp|PURL_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VLGEAFEEP 9
V+GE EEP
Sbjct: 325 VVGETIEEP 333


>sp|HIS7_METM5|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanococcus maripaludis (strain C5 /

Query: 1 VLGEAFE 7
VLG+AFE
Sbjct: 73 VLGKAFE 79


>sp|HIS7_METM7|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanococcus maripaludis (strain C7 /

Query: 1 VLGEAFE 7
VLG+AFE
Sbjct: 73 VLGKAFE 79


>sp|HIS7_METMP|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VLGEAFE 7
VLG+AFE
Sbjct: 73 VLGKAFE 79


>sp|PURL_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus abyssi (strain GE5 /

Query: 1 VLGEAFEEP 9
V+GE EEP
Sbjct: 326 VVGEIIEEP 334


>sp|HIS7_METVS|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VLGEAFE 7
VLG+AFE
Sbjct: 73 VLGKAFE 79


>sp|HIS7_METM6|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanococcus maripaludis (strain C6 /

Query: 1 VLGEAFE 7
VLG+AFE
Sbjct: 73 VLGKAFE 79


>sp|GATA_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 1 VLGEAFEEPG 10
++G+ F+EP
Sbjct: 443 IMGKPFDEPA 452


>sp|LIPA_PYRAE|LIPOYL synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LGEAFEE 8
LGE FEE
Sbjct: 200 LGETFEE 206




692|SequenceR|3465|3456|SRVGIVLGEA

>sp|HIS7_METS3|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 VGIVLGEA 10
VGI+LGEA
Sbjct: 71 VGILLGEA 78


>sp|HIS7_METM5|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanococcus maripaludis (strain C5 /

Query: 3 VGIVLGEA 10
VGIVLG+A
Sbjct: 70 VGIVLGKA 77


>sp|HIS7_METMP|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanococcus maripaludis (strain DSM 14266

Query: 3 VGIVLGEA 10
VGIVLG+A
Sbjct: 70 VGIVLGKA 77


>sp|HIS7_METM7|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanococcus maripaludis (strain C7 /

Query: 3 VGIVLGEA 10
VGIVLG+A
Sbjct: 70 VGIVLGKA 77


>sp|HIS7_METM6|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanococcus maripaludis (strain C6 /

Query: 3 VGIVLGEA 10
VGIVLG+A
Sbjct: 70 VGIVLGKA 77


>sp|HIS7_NATPD|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 VGIVLGE 9
+GIVLGE
Sbjct: 72 IGIVLGE 78


>sp|TMCA_HALVD|TRNA(MET) cytidine acetyltransferase TmcA|Haloferax volcanii (strain ATCC

Query: 2 RVGIVLGEA 10
RVG VLG+A
Sbjct: 620 RVGDVLGDA 628


>sp|HIS7_PYRFU|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VGIVLGEA 10
+GI LGEA
Sbjct: 58 IGITLGEA 65


>sp|RL22_METTH|LARGE ribosomal subunit protein uL22|Methanothermobacter

Query: 1 SRVGIVLGEA 10
+ V IVLGEA
Sbjct: 144 THVQIVLGEA 153


>sp|HIS7_METAC|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 VGIVLGEA 10
VGIVLG A
Sbjct: 70 VGIVLGRA 77


>sp|HIS7_HALWD|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 VGIVLGEA 10
VGIVLG++
Sbjct: 85 VGIVLGKS 92


>sp|HERA_PYRFU|DNA double-strand break repair helicase|Pyrococcus furiosus (strain

Query: 3 VGIVLGEA 10
VGIV GEA
Sbjct: 5 VGIVRGEA 12




693|SequenceR|3470|3461|THGFLSRVGI

>sp|GCH3_SULTO|GTP cyclohydrolase III|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 HGFLSRV 8
HGFLSR+
Sbjct: 31 HGFLSRL 37


>sp|RNZ_PYRAR|RIBONUCLEASE Z|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 HGFLSRVGI 10
HG LSR+G+
Sbjct: 96 HGILSRLGV 104


>sp|RF1_THEKO|PEPTIDE chain release factor subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 THGFLSRVG 9
TH F+ R+G
Sbjct: 192 THEFMKRIG 200


>sp|RF1_PYRHO|PEPTIDE chain release factor subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 THGFLSRVG 9
TH F+ R+G
Sbjct: 195 THEFMKRIG 203


>sp|RF1_PYRFU|PEPTIDE chain release factor subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 THGFLSRVG 9
TH F+ R+G
Sbjct: 195 THEFMKRIG 203


>sp|RF1_PYRAB|PEPTIDE chain release factor subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 THGFLSRVG 9
TH F+ R+G
Sbjct: 192 THEFMKRIG 200


>sp|RF1_METJA|PEPTIDE chain release factor subunit|Methanocaldococcus jannaschii (strain

Query: 2 HGFLSRVG 9
H FL RVG
Sbjct: 195 HEFLQRVG 202


>sp|Y2105_SACS2|UNCHARACTERIZED protein SSO2105|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 FLSRVGI 10
FLSR+G+
Sbjct: 269 FLSRIGV 275


>sp|COFD_METKA|2-PHOSPHO-L-LACTATE transferase|Methanopyrus kandleri (strain AV19 /

Query: 2 HGFLSRVGI 10
H FL R+G+
Sbjct: 76 HEFLERLGV 84


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 HGFLSRVGI 10
H FL+ +GI
Sbjct: 166 HDFLTHIGI 174


>sp|RF1_METTH|PEPTIDE chain release factor subunit|Methanothermobacter thermautotrophicus

Query: 2 HGFLSRVG 9
H FL R+G
Sbjct: 195 HEFLKRIG 202


>sp|RF1_METST|PEPTIDE chain release factor subunit|Methanosphaera stadtmanae (strain ATCC

Query: 2 HGFLSRVG 9
H FL R+G
Sbjct: 195 HEFLKRIG 202


>sp|SYE_PYRIL|GLUTAMATE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 HGFLSRVG 9
+GFL +VG
Sbjct: 554 YGFLKKVG 561




694|SequenceR|3475|3466|AAGGVTHGFL

>sp|PYRF_METBU|OROTIDINE 5'-phosphate decarboxylase|Methanococcoides burtonii (strain DSM

Query: 1 AAGGVTHGF 9
AAG +THGF
Sbjct: 82 AAGIITHGF 90


>sp|PSTB2_NATPD|PHOSPHATE import ATP-binding protein PstB|Natronomonas pharaonis (strain

Query: 1 AAGGVTHGF 9
A GV+HGF
Sbjct: 37 AVAGVSHGF 45


>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain ATCC

Query: 3 GGVTHGF 9
GGV+H F
Sbjct: 237 GGVSHSF 243


>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 AAGGVTH 7
A GGVTH
Sbjct: 331 ADGGVTH 337


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 5 VTHGFL 10
VTHGF+
Sbjct: 377 VTHGFV 382


>sp|PUR2_METB6|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanoregula boonei (strain DSM 21154

Query: 4 GVTHGFL 10
GVTH F+
Sbjct: 64 GVTHAFI 70


>sp|FLAH_METJA|ARCHAEAL flagellar ATP-binding protein FlaH|Methanocaldococcus jannaschii

Query: 2 AGGVTHGFL 10
GG+ HG L
Sbjct: 21 GGGIPHGSL 29




695|SequenceR|3480|3471|RSVVGAAGGV

>sp|DEOC_PYRNV|DEOXYRIBOSE-PHOSPHATE aldolase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 SVVGAAGG 9
SVVGAAGG
Sbjct: 106 SVVGAAGG 113


>sp|DEOC_PYRAE|DEOXYRIBOSE-PHOSPHATE aldolase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 SVVGAAGG 9
SVVGAAGG
Sbjct: 106 SVVGAAGG 113


>sp|NADE_THEVO|NH(3)-DEPENDENT NAD(+) synthetase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RSVVGAAGGV 10
++V+G +GG+
Sbjct: 23 KAVIGISGGI 32


>sp|DEOC_PYRIL|DEOXYRIBOSE-PHOSPHATE aldolase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 SVVGAAGG 9
+VVGAAGG
Sbjct: 106 TVVGAAGG 113


>sp|SYFA_HALSA|PHENYLALANINE--TRNA ligase alpha subunit|Halobacterium salinarum (strain ATCC 700922

Query: 2 SVVGAAG 8
SV+GAAG
Sbjct: 96 SVIGAAG 102


>sp|SYFA_HALS3|PHENYLALANINE--TRNA ligase alpha subunit|Halobacterium salinarum (strain ATCC 29341

Query: 2 SVVGAAG 8
SV+GAAG
Sbjct: 96 SVIGAAG 102


>sp|DAPAL_THEAC|UNCHARACTERIZED DapA-like lyase Ta1157|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 VGAAGGV 10
+GA+GGV
Sbjct: 197 IGASGGV 203


>sp|DEOC_PYRAR|DEOXYRIBOSE-PHOSPHATE aldolase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 SVVGAAGG 9
SVVGA+GG
Sbjct: 106 SVVGASGG 113


>sp|NADE_STAMF|NH(3)-DEPENDENT NAD(+) synthetase|Staphylothermus marinus (strain ATCC 43588

Query: 2 SVVGAAGGV 10
+V+G +GGV
Sbjct: 36 AVIGLSGGV 44


>sp|DTDA_HALWD|D-AMINOACYL-TRNA deacylase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 RSVVGAAGG 9
R+VVG GG
Sbjct: 185 RTVVGFGGG 193




696|SequenceR|3485|3476|VSGTIRSVVG

>sp|Y1438_METS3|MEMO1 family protein Msm_1438|Methanobrevibacter smithii (strain ATCC

Query: 1 VSGTIRSVVG 10
+SG + SVVG
Sbjct: 266 ISGDLSSVVG 275


>sp|AATA_METST|A-TYPE ATP synthase subunit A|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VSGTIRSVV 9
+SGTI+S+V
Sbjct: 154 MSGTIKSIV 162


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 VSGTIRSVVG 10
V G +RSV+G
Sbjct: 608 VLGALRSVLG 617


>sp|DNAG_IGNH4|DNA primase DnaG|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VSGTIRSVV 9
++GT+RSV+
Sbjct: 362 ITGTLRSVL 370




697|SequenceR|3490|3481|ALGKGVSGTI

>sp|PRIL_SACS2|DNA primase large subunit PriL|Saccharolobus solfataricus (strain ATCC

Query: 2 LGKGVSGTI 10
+GKG+SG +
Sbjct: 241 IGKGLSGIV 249


>sp|TRPD_META3|ANTHRANILATE phosphoribosyltransferase|Methanococcus aeolicus (strain ATCC

Query: 2 LGKGVSGT 9
LGKG+S T
Sbjct: 64 LGKGISDT 71


>sp|KPTA_METMA|PROBABLE RNA 2'-phosphotransferase|Methanosarcina mazei (strain ATCC

Query: 2 LGKGVSGTI 10
LG+ VSGT+
Sbjct: 35 LGRFVSGTL 43


>sp|KPTA_METBF|PROBABLE RNA 2'-phosphotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LGKGVSGTI 10
LG+ VSGT+
Sbjct: 35 LGRFVSGTL 43


>sp|KPTA_METAC|PROBABLE RNA 2'-phosphotransferase|Methanosarcina acetivorans (strain ATCC

Query: 2 LGKGVSGTI 10
LG+ VSGT+
Sbjct: 35 LGRFVSGTL 43




698|SequenceR|3495|3486|DMTIAALGKG

>sp|GLCDH_THETK|GLUCOSE 1-dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 4 IAALGKG 10
+AALGKG
Sbjct: 70 VAALGKG 76


>sp|RLME_METAR|RIBOSOMAL RNA large subunit methyltransferase|Methanocella arvoryzae (strain

Query: 1 DMTIAALGK 9
D+TI A+GK
Sbjct: 203 DVTIDAMGK 211


>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DMTIAALGKG 10
D T+A LG G
Sbjct: 856 DGTVAVLGSG 865


>sp|COBS_METAC|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 MTIAALGK 9
+TIAA GK
Sbjct: 163 LTIAAFGK 170


>sp|COBS_METBF|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 MTIAALGK 9
+TIAA GK
Sbjct: 163 LTIAAFGK 170


>sp|COBS_METMA|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 MTIAALGK 9
+TIAA GK
Sbjct: 163 LTIAAFGK 170


>sp|SRP54_HALMA|SIGNAL recognition particle 54 kDa|Haloarcula marismortui (strain ATCC

Query: 1 DMTIAALGKG 10
D TIA LG G
Sbjct: 261 DSTIAFLGSG 270




699|SequenceR|3500|3491|QQYEKDMTIA

>sp|PSB_META3|PROTEASOME subunit beta|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 QQYEKDMTI 9
++Y+KDMTI
Sbjct: 157 EEYKKDMTI 165


>sp|PSB_HALSA|PROTEASOME subunit beta|Halobacterium salinarum (strain ATCC 700922

Query: 1 QQYEKDMTIA 10
Q+Y +D+T+A
Sbjct: 188 QEYSEDLTMA 197


>sp|PSB_HALS3|PROTEASOME subunit beta|Halobacterium salinarum (strain ATCC 29341

Query: 1 QQYEKDMTIA 10
Q+Y +D+T+A
Sbjct: 188 QEYSEDLTMA 197


>sp|COMB_METJA|2-PHOSPHOSULFOLACTATE phosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YEKDMTIA 10
YEKD+T A
Sbjct: 194 YEKDVTFA 201


>sp|PSB_METBF|PROTEASOME subunit beta|Methanosarcina barkeri (strain Fusaro /

Query: 2 QYEKDMTI 9
QY +DMT+
Sbjct: 152 QYREDMTV 159


>sp|PSB_NATPD|PROTEASOME subunit beta|Natronomonas pharaonis (strain ATCC 35678

Query: 1 QQYEKDMT 8
++YE DMT
Sbjct: 184 REYEDDMT 191


>sp|Y2394_METBU|MEMO1 family protein Mbur_2394|Methanococcoides burtonii (strain DSM 6242

Query: 1 QQYEKDMT 8
++YEKD+T
Sbjct: 209 RKYEKDIT 216


>sp|PIMT_HYPBU|PROTEIN-L-ISOASPARTATE O-methyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 QQYEKDMTIA 10
++YE D T+A
Sbjct: 232 REYEADTTLA 241


>sp|AATB_SULAC|A-TYPE ATP synthase subunit B|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 YEKDMTI 9
YEKDM I
Sbjct: 242 YEKDMHI 248


>sp|PSB1_HALMA|PROTEASOME subunit beta 1|Haloarcula marismortui (strain ATCC 43049

Query: 2 QYEKDMT 8
+YE+DMT
Sbjct: 187 RYEEDMT 193




700|SequenceR|3505|3496|EERRKQQYEK

>sp|APGM_METM6|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C6 /

Query: 1 EERRKQ 6
EERRKQ
Sbjct: 205 EERRKQ 210


>sp|APGM_METM7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C7 /

Query: 1 EERRKQ 6
EERRKQ
Sbjct: 205 EERRKQ 210


>sp|ASPGP_PYRFU|PLANT-TYPE L-asparaginase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EERRKQQYE 9
EERRKQ E
Sbjct: 137 EERRKQWEE 145


>sp|ASPGP_PYRAB|PLANT-TYPE L-asparaginase|Pyrococcus abyssi (strain GE5 /

Query: 1 EERRKQQYE 9
EERRKQ E
Sbjct: 137 EERRKQWQE 145


>sp|APGM_METM5|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C5 /

Query: 1 EERRKQ 6
EERRKQ
Sbjct: 205 EERRKQ 210


>sp|APGM_METMP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EERRKQ 6
EERRKQ
Sbjct: 205 EERRKQ 210


>sp|IF2G_HALMA|TRANSLATION initiation factor 2 subunit|Haloarcula marismortui (strain ATCC

Query: 1 EERRKQQYEK 10
EER Q YE+
Sbjct: 153 EERAMQNYEQ 162


>sp|PFDB_PYRAR|PREFOLDIN subunit beta|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 RKQQYE 9
RKQQYE
Sbjct: 28 RKQQYE 33


>sp|PFDB_CALMQ|PREFOLDIN subunit beta|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 RKQQYE 9
RKQQYE
Sbjct: 29 RKQQYE 34


>sp|PFDB_PYRAE|PREFOLDIN subunit beta|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 RKQQYE 9
RKQQYE
Sbjct: 28 RKQQYE 33




701|SequenceR|3510|3501|PQRSLEERRK

>sp|ILVD_PYRIL|DIHYDROXY-ACID dehydratase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PQRSLEERRK 10
PQ LE RRK
Sbjct: 518 PQEELERRRK 527


>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PQRSLEERRK 10
PQ LE RRK
Sbjct: 518 PQEELERRRK 527


>sp|TOP6B_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 2 QRSLEERRK 10
QRSLE+RR+
Sbjct: 660 QRSLEKRRR 668


>sp|PURL_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PQRSLEERRK 10
P+R LEE R+
Sbjct: 651 PERKLEEARE 660


>sp|RL21_NATPD|LARGE ribosomal subunit protein eL21|Natronomonas pharaonis (strain

Query: 1 PQRSLEE 7
PQRS+EE
Sbjct: 27 PQRSIEE 33


>sp|ILVD_METMJ|DIHYDROXY-ACID dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 SLEERRK 10
+LEERRK
Sbjct: 511 TLEERRK 517


>sp|Y1830_SULTO|UPF0273 protein STK_18300|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PQRSLEERRK 10
PQ+ +EE +K
Sbjct: 254 PQKEIEEMKK 263


>sp|LONH_METTH|PUTATIVE lon protease homolog|Methanothermobacter thermautotrophicus (strain

Query: 2 QRSLEERRK 10
QR+LE+RR+
Sbjct: 212 QRALEKRRQ 220




702|SequenceR|3515|3506|DGFDRPQRSL

>sp|PDXT_METTP|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanothrix thermoacetophila

Query: 1 DGFDRPQRSL 10
+GFDRP R++
Sbjct: 123 EGFDRPYRAV 132


>sp|RL15_METST|LARGE ribosomal subunit protein uL15|Methanosphaera stadtmanae (strain

Query: 2 GFDRPQRSL 10
GF RPQ+++
Sbjct: 59 GFKRPQKTI 67


>sp|RL15_HYPBU|LARGE ribosomal subunit protein uL15|Hyperthermus butylicus (strain DSM

Query: 2 GFDRPQ 7
GF+RPQ
Sbjct: 61 GFNRPQ 66


>sp|Y1281_METJA|UNCHARACTERIZED protein MJ1281|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DGFDRP 6
DGFD P
Sbjct: 822 DGFDEP 827


>sp|AATA_NITMS|A-TYPE ATP synthase subunit A|Nitrosopumilus maritimus (strain SCM1)

Query: 1 DGFDRPQRSL 10
DG RP R+L
Sbjct: 86 DGIQRPLRAL 95


>sp|RL15_METTH|LARGE ribosomal subunit protein uL15|Methanothermobacter

Query: 2 GFDRPQR 8
GF RPQ+
Sbjct: 59 GFKRPQK 65


>sp|RL15_METS3|LARGE ribosomal subunit protein uL15|Methanobrevibacter smithii (strain

Query: 2 GFDRPQRSL 10
GF RPQ+ +
Sbjct: 59 GFKRPQKMI 67


>sp|UVRC_NATPD|UVRABC system protein C|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GFDRPQR 8
G DRP+R
Sbjct: 370 GIDRPER 376


>sp|ARLY_METAR|ARGININOSUCCINATE lyase|Methanocella arvoryzae (strain DSM 22066

Query: 2 GFDRP 6
GFDRP
Sbjct: 220 GFDRP 224


>sp|RFCL_METMA|REPLICATION factor C large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GFDRPQR 8
GFD PQ+
Sbjct: 495 GFDTPQK 501


>sp|RL15_NATPD|LARGE ribosomal subunit protein uL15|Natronomonas pharaonis (strain

Query: 2 GFDRPQRS 9
GF RPQ++
Sbjct: 50 GFKRPQKT 57


>sp|TH11_HALSA|PROBABLE transposase for insertion sequence|Halobacterium salinarum

Query: 2 GFDRP 6
GFDRP
Sbjct: 89 GFDRP 93


>sp|TH11_HALS3|PROBABLE transposase for insertion sequence|Halobacterium salinarum

Query: 2 GFDRP 6
GFDRP
Sbjct: 89 GFDRP 93




703|SequenceR|3520|3511|GRALSDGFDR

>sp|MAAL_HALMA|METHYLASPARTATE ammonia-lyase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GRALSDGFDR 10
G+ ++DGFDR
Sbjct: 36 GQPVTDGFDR 45


>sp|KHSE_METAR|HOMOSERINE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GRALSDGFD 9
GR+LSD F+
Sbjct: 210 GRSLSDTFN 218


>sp|ARCS_METJA|ARCHAEOSINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GRALSDGFD 9
GRAL GF+
Sbjct: 544 GRALMSGFE 552


>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 2 RALSDGFDR 10
RALSDG R
Sbjct: 72 RALSDGVHR 80


>sp|TRPA_METVS|TRYPTOPHAN synthase alpha chain|Methanococcus vannielii (strain ATCC 35089

Query: 2 RALSDGF 8
RALS+GF
Sbjct: 56 RALSNGF 62


>sp|TRPA_METM7|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C7 /

Query: 2 RALSDGF 8
RALS+GF
Sbjct: 56 RALSNGF 62


>sp|TRPA_METM6|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C6 /

Query: 2 RALSDGF 8
RALS+GF
Sbjct: 56 RALSNGF 62


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 1 GRALSDGFDR 10
GR L +GF +
Sbjct: 382 GRTLEEGFKK 391


>sp|RF1_THESM|PEPTIDE chain release factor subunit|Thermococcus sibiricus (strain DSM

Query: 4 LSDGFDR 10
LS+G+DR
Sbjct: 317 LSEGYDR 323


>sp|TRPA_METM5|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C5 /

Query: 2 RALSDGF 8
RALS+GF
Sbjct: 56 RALSNGF 62


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 GRALSDGFD 9
GRA+ GFD
Sbjct: 319 GRAIEAGFD 327


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 ALSDGFD 9
ALSD FD
Sbjct: 189 ALSDAFD 195


>sp|THIOL_METTH|ACETYL-COA acetyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 GRALSDGFDR 10
GRA DG R
Sbjct: 305 GRAFEDGMTR 314


>sp|SURE_HALSA|5'-NUCLEOTIDASE SurE|Halobacterium salinarum (strain ATCC 700922

Query: 2 RALSDGFD 9
RAL+DG D
Sbjct: 22 RALADGLD 29


>sp|SURE_HALS3|5'-NUCLEOTIDASE SurE|Halobacterium salinarum (strain ATCC 29341

Query: 2 RALSDGFD 9
RAL+DG D
Sbjct: 22 RALADGLD 29


>sp|SYFB_HALMA|PHENYLALANINE--TRNA ligase beta subunit|Haloarcula marismortui (strain ATCC 43049

Query: 2 RALSDGFDR 10
+AL+D FD+
Sbjct: 518 QALADAFDK 526




704|SequenceR|3525|3516|LFGKGGRALS

>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LFGKGGR 7
LFG GGR
Sbjct: 427 LFGVGGR 433


>sp|Y179_ARCFU|UNCHARACTERIZED protein AF_0179|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GKGGRALS 10
G GGRA+S
Sbjct: 42 GTGGRAIS 49


>sp|GLCD2_PICTO|GLUCOSE/GALACTOSE 1-dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 1 LFGKGGRA 8
LFG GRA
Sbjct: 272 LFGTNGRA 279


>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii (strain

Query: 1 LFGKGGRALS 10
+ GKGG+ +S
Sbjct: 525 IIGKGGKEIS 534


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM 14266

Query: 1 LFGKGG 6
+FGKGG
Sbjct: 227 IFGKGG 232


>sp|HEM4_METTH|PUTATIVE uroporphyrinogen-III synthase|Methanothermobacter

Query: 3 GKGGRAL 9
G GGRAL
Sbjct: 19 GAGGRAL 25


>sp|DNAJ_NATPD|CHAPERONE protein DnaJ|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LFGKGGRALS 10
FG GGR+ S
Sbjct: 108 FFGGGGRSQS 117


>sp|CYB_SULAC|CYTOCHROME b|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LFGKGGRA 8
LFG GG A
Sbjct: 171 LFGPGGSA 178


>sp|3MGH_AERPE|PUTATIVE 3-methyladenine DNA glycosylase|Aeropyrum pernix (strain ATCC

Query: 1 LFGKGGRAL 9
L+G+ GRAL
Sbjct: 66 LYGEPGRAL 74




705|SequenceR|3530|3521|GVVGRLFGKG

>sp|DNLI_NITMS|DNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 VVGRLFGKG 10
V+G FGKG
Sbjct: 440 VIGGFFGKG 448


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 GVVGRLFG 8
GVVGR+ G
Sbjct: 806 GVVGRIIG 813


>sp|VHTC_METMA|F420 non-reducing hydrogenase II cytochrome|Methanosarcina mazei (strain

Query: 1 GVVGRLFGKG 10
G++ FGKG
Sbjct: 105 GIIKNFFGKG 114


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 GVVGRLFG 8
GVVGR+ G
Sbjct: 801 GVVGRIIG 808


>sp|DNLI_CENSY|DNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 VVGRLFGKG 10
++G FGKG
Sbjct: 440 IIGAFFGKG 448


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 1 GVVGRLFG 8
GV+GRL G
Sbjct: 868 GVLGRLIG 875


>sp|DNLI_METS5|DNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 VVGRLFGKG 10
VVG +GKG
Sbjct: 451 VVGAFYGKG 459


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 GVVGRLFG 8
G+VGR+ G
Sbjct: 924 GIVGRIIG 931


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 GVVGRLFG 8
G+VGR+ G
Sbjct: 927 GIVGRIIG 934


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 1 GVVGRLFG 8
G+VGR+ G
Sbjct: 800 GIVGRIIG 807


>sp|DNLI_SACS2|DNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VVGRLFGKG 10
VVG +GKG
Sbjct: 450 VVGGFYGKG 458


>sp|DNLI_SACI7|DNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 VVGRLFGKG 10
VVG +GKG
Sbjct: 450 VVGGFYGKG 458


>sp|DNLI_SACI6|DNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 VVGRLFGKG 10
VVG +GKG
Sbjct: 450 VVGGFYGKG 458


>sp|DNLI_SACI4|DNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 VVGRLFGKG 10
VVG +GKG
Sbjct: 450 VVGGFYGKG 458


>sp|DNLI_SACI3|DNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 VVGRLFGKG 10
VVG +GKG
Sbjct: 450 VVGGFYGKG 458


>sp|DNLI_SACI2|DNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 VVGRLFGKG 10
VVG +GKG
Sbjct: 450 VVGGFYGKG 458


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 GVVGRLFG 8
GV+GRL G
Sbjct: 864 GVLGRLIG 871


>sp|DNLI_SACSH|DNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 2 VVGRLFGKG 10
VVG +GKG
Sbjct: 450 VVGGFYGKG 458


>sp|DNLI_SACI1|DNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 VVGRLFGKG 10
VVG +GKG
Sbjct: 450 VVGGFYGKG 458


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GVVGRLFG 8
G+VGR+ G
Sbjct: 925 GIVGRIIG 932


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 GVVGRLFG 8
GVVGR+ G
Sbjct: 961 GVVGRVVG 968


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 1 GVVGRLFG 8
GV+GRL G
Sbjct: 870 GVLGRLIG 877


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 GVVGRLFG 8
GV+GRL G
Sbjct: 863 GVLGRLIG 870


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 GVVGRLFG 8
G++GR+ G
Sbjct: 936 GIIGRIIG 943


>sp|ARLY_METAR|ARGININOSUCCINATE lyase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GVVGRLFGKG 10
G+VGRL +G
Sbjct: 390 GIVGRLAREG 399


>sp|DNLI2_KORCO|DNA ligase 2|Korarchaeum cryptofilum (strain OPF8)

Query: 2 VVGRLFGKG 10
VVG +GKG
Sbjct: 442 VVGAFWGKG 450


>sp|DNLI_SULTO|DNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VVGRLFGKG 10
VVG +G+G
Sbjct: 450 VVGAFYGRG 458


>sp|DNLI_PYRIL|DNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 VVGRLFGKG 10
VVG +G+G
Sbjct: 439 VVGAFYGRG 447


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 1 GVVGRLFG 8
G+VGR+ G
Sbjct: 854 GMVGRIIG 861


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 GVVGRLFG 8
G+VGR+ G
Sbjct: 854 GMVGRIIG 861


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 GVVGRLFG 8
G+VGR+ G
Sbjct: 854 GMVGRIIG 861


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 GVVGRLFG 8
G+VGR+ G
Sbjct: 854 GMVGRIIG 861


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 1 GVVGRLFG 8
G+VGR+ G
Sbjct: 860 GMVGRIIG 867


>sp|CYB_SULAC|CYTOCHROME b|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GVVGRLFGKG 10
+VG LFG G
Sbjct: 166 AIVGWLFGPG 175


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 GVVGRLFG 8
GV+GR+ G
Sbjct: 866 GVLGRIIG 873


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 1 GVVGRLFG 8
GV+GR+ G
Sbjct: 856 GVLGRIIG 863


>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 VVGRLFGKG 10
VVG +G+G
Sbjct: 439 VVGAFYGRG 447


>sp|PUS10_CENSY|TRNA pseudouridine synthase Pus10|Cenarchaeum symbiosum (strain A)

Query: 2 VVGRLFGKG 10
+GRLFG G
Sbjct: 13 CLGRLFGSG 21


>sp|PUS10_PYRFU|TRNA pseudouridine synthase Pus10|Pyrococcus furiosus (strain ATCC

Query: 3 VGRLFGK 9
+GRLFGK
Sbjct: 20 LGRLFGK 26


>sp|PIMT_METM6|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 GVVGRLFGKG 10
GVVG L KG
Sbjct: 8 GVVGNLISKG 17


>sp|DNLI1_METAC|DNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VVGRLFGKG 10
VVG +GKG
Sbjct: 443 VVGSYYGKG 451


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 VVGRLFGKG 10
VVG +G+G
Sbjct: 439 VVGAFYGRG 447


>sp|FDHB_METTF|F420-DEPENDENT formate dehydrogenase subunit beta|Methanothermobacter

Query: 1 GVVGRLFGKG 10
GV+G L GK
Sbjct: 209 GVIGPLAGKA 218


>sp|FDHB_METFO|F420-DEPENDENT formate dehydrogenase subunit beta|Methanobacterium formicicum

Query: 1 GVVGRLFGKG 10
GV+G L GK
Sbjct: 210 GVIGPLAGKA 219


>sp|Y1308_METJA|UNCHARACTERIZED protein MJ1308|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VVGRLFGK 9
++GR++GK
Sbjct: 45 IIGRVYGK 52


>sp|KPYK_THEAC|PYRUVATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GVVGRLFGKG 10
VVG+ G+G
Sbjct: 448 AVVGKFIGRG 457


>sp|DNLI_METKA|DNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 VVGRLFGKG 10
V+G ++GKG
Sbjct: 435 VIGGIWGKG 443




706|SequenceR|3535|3526|IGTVGGVVGR

>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 3 TVGGVVGR 10
T GGVVGR
Sbjct: 803 TSGGVVGR 810


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 TVGGVVGR 10
T GGVVGR
Sbjct: 798 TSGGVVGR 805


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 3 TVGGVVGR 10
T GG+VGR
Sbjct: 797 TSGGIVGR 804


>sp|PFDA_SACI1|PREFOLDIN subunit alpha|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 IGTVGGVVG 9
+ VGGVVG
Sbjct: 69 LAKVGGVVG 77


>sp|SYFB_METS5|PHENYLALANINE--TRNA ligase beta subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 IGTVGGVVGR 10
+ +GG++GR
Sbjct: 245 LAELGGIIGR 254


>sp|Y3270_HALS3|UNCHARACTERIZED solute-binding protein OE_3270R|Halobacterium salinarum (strain

Query: 1 IGTVGGVVG 9
+GT G ++G
Sbjct: 13 LGTAGAIIG 21


>sp|Y1595_HALSA|UNCHARACTERIZED solute-binding protein VNG_1595C|Halobacterium salinarum (strain

Query: 1 IGTVGGVVG 9
+GT G ++G
Sbjct: 13 LGTAGAIIG 21


>sp|PFDA_SACI7|PREFOLDIN subunit alpha|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 IGTVGGVVG 9
+ VGG+VG
Sbjct: 69 LAKVGGIVG 77


>sp|PFDA_SACI6|PREFOLDIN subunit alpha|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IGTVGGVVG 9
+ VGG+VG
Sbjct: 69 LAKVGGIVG 77


>sp|PFDA_SACI4|PREFOLDIN subunit alpha|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IGTVGGVVG 9
+ VGG+VG
Sbjct: 69 LAKVGGIVG 77


>sp|PFDA_SACI2|PREFOLDIN subunit alpha|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 IGTVGGVVG 9
+ VGG+VG
Sbjct: 69 LAKVGGIVG 77


>sp|GATE_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Archaeoglobus fulgidus (strain ATCC

Query: 5 GGVVGR 10
GG+VGR
Sbjct: 308 GGIVGR 313




707|SequenceR|3540|3531|VPKTIIGTVG

>sp|LYSY_PICTO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 PKTIIGT 8
PKT+IGT
Sbjct: 284 PKTVIGT 290


>sp|Y925_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0925|Methanocaldococcus

Query: 1 VPKTIIGTVG 10
+PK IIG +G
Sbjct: 93 IPKIIIGMLG 102


>sp|PURL_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VPKTIIGTVG 10
VP +IGTVG
Sbjct: 673 VPHAVIGTVG 682


>sp|CSA3_METJA|CRISPR locus-related putative DNA-binding protein|Methanocaldococcus

Query: 1 VPKTIIGTVG 10
VPKTII G
Sbjct: 94 VPKTIINLTG 103


>sp|GLMS_METAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina acetivorans (strain

Query: 1 VPKTIIGTVG 10
+PK + GTVG
Sbjct: 57 IPKNLGGTVG 66


>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VPKTIIGTV 9
VP T++G V
Sbjct: 371 VPATVVGKV 379


>sp|Y1472_METJA|UNCHARACTERIZED protein MJ1472|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PKTIIGTV 9
PKT GT+
Sbjct: 493 PKTFTGTI 500


>sp|AATA_CENSY|A-TYPE ATP synthase subunit A|Cenarchaeum symbiosum (strain A)

Query: 1 VPKTIIGTV 9
+P T+IGTV
Sbjct: 131 IPGTVIGTV 139


>sp|Y1613_METJA|UNCHARACTERIZED protein MJ1613|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VPKTIIGTVG 10
VPK IGTV
Sbjct: 151 VPKEEIGTVN 160


>sp|PURL_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 PKTIIGTVG 10
P I+GTVG
Sbjct: 526 PSPIVGTVG 534


>sp|Y799_METJA|UNCHARACTERIZED protein MJ0799|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PKTIIGT 8
PK IIGT
Sbjct: 270 PKLIIGT 276


>sp|MAX1_METAC|SODIUM/CALCIUM exchanger MaX1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VPKTIIGT 8
+P T+IGT
Sbjct: 238 IPDTVIGT 245




708|SequenceR|3545|3536|KKAGEVPKTI

>sp|SYS2_METBU|TYPE-2 serine--tRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 KKAGEVPKTI 10
K+ GEVPK I
Sbjct: 490 KRVGEVPKGI 499


>sp|HIS7_HALSA|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Halobacterium salinarum (strain ATCC 700922

Query: 1 KKAGEVPKT 9
++AGE P T
Sbjct: 184 RRAGETPST 192


>sp|HIS7_HALS3|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Halobacterium salinarum (strain ATCC 29341

Query: 1 KKAGEVPKT 9
++AGE P T
Sbjct: 184 RRAGETPST 192


>sp|COBQ_ARCFU|PROBABLE cobyric acid synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KKAGEVP 7
+KAGE+P
Sbjct: 310 RKAGEIP 316


>sp|RPO10_METLZ|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanocorpusculum labreanum (strain

Query: 1 KKAGEVPKTI 10
K AGE PK I
Sbjct: 24 KAAGEDPKEI 33


>sp|Y1477_METJA|UNCHARACTERIZED protein MJ1477|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KKAGEVP 7
KKAG++P
Sbjct: 114 KKAGKIP 120


>sp|GFCR_METM7|TRANSCRIPTIONAL regulator GfcR|Methanococcus maripaludis (strain C7 /

Query: 2 KAGEVPK 8
KAGE PK
Sbjct: 45 KAGETPK 51


>sp|GFCR_METM6|TRANSCRIPTIONAL regulator GfcR|Methanococcus maripaludis (strain C6 /

Query: 2 KAGEVPK 8
KAGE PK
Sbjct: 45 KAGETPK 51


>sp|GFCR_METM5|TRANSCRIPTIONAL regulator GfcR|Methanococcus maripaludis (strain C5 /

Query: 2 KAGEVPK 8
KAGE PK
Sbjct: 45 KAGETPK 51


>sp|RL31_METTH|LARGE ribosomal subunit protein eL31|Methanothermobacter

Query: 1 KKAGEVPKTI 10
+KA VP+TI
Sbjct: 10 RKAKNVPRTI 19


>sp|GYAR_THEGJ|GLYOXYLATE reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 KAGEVPKTI 10
K GEVP T+
Sbjct: 312 KNGEVPPTL 320


>sp|NIFE_METBA|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanosarcina

Query: 1 KKAGEVPKTI 10
KKA VP+TI
Sbjct: 193 KKAPRVPETI 202


>sp|GYAR_THEON|GLYOXYLATE reductase|Thermococcus onnurineus (strain NA1)

Query: 2 KAGEVPKTI 10
K GEVP T+
Sbjct: 312 KNGEVPPTL 320


>sp|GYAR_THEKO|GLYOXYLATE reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KAGEVPKTI 10
K GEVP T+
Sbjct: 312 KNGEVPPTL 320


>sp|ENGB_METMP|PROBABLE GTP-binding protein EngB|Methanococcus maripaludis (strain DSM

Query: 1 KKAGEVPKTI 10
KKA E PK I
Sbjct: 32 KKADERPKVI 41


>sp|GYAR_PYRAB|GLYOXYLATE reductase|Pyrococcus abyssi (strain GE5 /

Query: 2 KAGEVPKTI 10
K GEVP T+
Sbjct: 313 KRGEVPPTL 321


>sp|RS4_METLZ|SMALL ribosomal subunit protein uS4|Methanocorpusculum labreanum

Query: 4 GEVPKTI 10
GE PKTI
Sbjct: 66 GEAPKTI 72




709|SequenceR|3550|3541|GAAGEKKAGE

>sp|PRIL_PYRAB|DNA primase large subunit PriL|Pyrococcus abyssi (strain GE5 /

Query: 1 GAAGEKKAG 9
G +GE KAG
Sbjct: 212 GKSGEVKAG 220


>sp|AMPPA_METTP|AMP phosphorylase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GAAGEKKAG 9
GA G+K+AG
Sbjct: 439 GAPGDKRAG 447




710|SequenceR|3555|3546|IGKFFGAAGE

>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 1 IGKFFGAAG 9
+GK+FG +G
Sbjct: 1 MGKYFGTSG 9


>sp|Y1433_METJA|UNCHARACTERIZED protein MJ1433|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IGKFFGAAGE 10
+G FF + GE
Sbjct: 77 VGSFFNSVGE 86


>sp|THPR_METTH|RNA 2',3'-cyclic phosphodiesterase|Methanothermobacter

Query: 3 KFFGAAGE 10
KFFG GE
Sbjct: 46 KFFGDVGE 53


>sp|THIM_METMA|HYDROXYETHYLTHIAZOLE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 FFGAAGE 10
+FGAAGE
Sbjct: 218 YFGAAGE 224


>sp|GLMM_PYRFU|PROBABLE phosphoglucosamine mutase|Pyrococcus furiosus (strain ATCC

Query: 1 IGKFFGAAG 9
+GK+FG +G
Sbjct: 1 MGKYFGTSG 9


>sp|HIS82_ARCFU|HISTIDINOL-PHOSPHATE aminotransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KFFGAAG 9
KFFG AG
Sbjct: 206 KFFGLAG 212


>sp|GLMM_PYRAB|PROBABLE phosphoglucosamine mutase|Pyrococcus abyssi (strain GE5 /

Query: 1 IGKFFGAAG 9
+GK+FG +G
Sbjct: 1 MGKYFGTSG 9


>sp|RAD50_METMA|DNA double-strand break repair Rad50|Methanosarcina mazei (strain ATCC

Query: 5 FGAAGE 10
FGAAGE
Sbjct: 404 FGAAGE 409


>sp|AATC_METTP|A-TYPE ATP synthase subunit C|Methanothrix thermoacetophila (strain DSM

Query: 2 GKFFGAA 8
GKF+GA+
Sbjct: 117 GKFYGAS 123


>sp|GLMM_THEON|PROBABLE phosphoglucosamine mutase|Thermococcus onnurineus (strain NA1)

Query: 1 IGKFFGAAG 9
+GK+FG +G
Sbjct: 1 MGKYFGTSG 9


>sp|EF2_METRM|ELONGATION factor 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 IGKFFGAAGE 10
I K FG AG+
Sbjct: 671 IAKMFGFAGD 680


>sp|GLMM_THEKO|PROBABLE phosphoglucosamine mutase|Thermococcus kodakarensis (strain

Query: 1 IGKFFGAAG 9
+GK+FG +G
Sbjct: 1 MGKYFGTSG 9


>sp|GLMM_PYRHO|PROBABLE phosphoglucosamine mutase|Pyrococcus horikoshii (strain ATCC

Query: 1 IGKFFGAAG 9
+G++FG +G
Sbjct: 1 MGRYFGTSG 9


>sp|PRIS_METBU|DNA primase small subunit PriS|Methanococcoides burtonii (strain DSM

Query: 3 KFFGAAGE 10
K FG+AGE
Sbjct: 50 KSFGSAGE 57


>sp|LEU3_HALVD|3-ISOPROPYLMALATE dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 4 FFGAAGE 10
FGAAGE
Sbjct: 65 LFGAAGE 71


>sp|AAT_PYRAB|ASPARTATE aminotransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 GKFFGAAGE 10
G FG AGE
Sbjct: 350 GSAFGKAGE 358


>sp|PYRF_HALLT|OROTIDINE 5'-phosphate decarboxylase|Halorubrum lacusprofundi (strain ATCC

Query: 4 FFGAAGE 10
+FGAAG+
Sbjct: 257 YFGAAGD 263


>sp|ARAT2_THELN|AROMATIC-AMINO-ACID aminotransferase 2|Thermococcus litoralis (strain ATCC 51850

Query: 2 GKFFGAAGE 10
G FG AGE
Sbjct: 350 GSAFGQAGE 358


>sp|LEU3_METTH|3-ISOPROPYLMALATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 FFGAAGE 10
FGAAGE
Sbjct: 67 LFGAAGE 73


>sp|GLMM_THEGJ|PROBABLE phosphoglucosamine mutase|Thermococcus gammatolerans (strain

Query: 1 IGKFFGAAG 9
+G++FG +G
Sbjct: 1 MGRYFGTSG 9


>sp|Y2399_ARCFU|UNCHARACTERIZED tRNA/rRNA methyltransferase AF_2399|Archaeoglobus fulgidus (strain

Query: 2 GKFFGAAG 9
+FFGAAG
Sbjct: 98 AEFFGAAG 105


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GKFFGAAGE 10
GK FG GE
Sbjct: 562 GKIFGNYGE 570


>sp|THIM_METAC|HYDROXYETHYLTHIAZOLE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 FFGAAGE 10
+FGA+GE
Sbjct: 218 YFGASGE 224


>sp|LEU3_METJA|3-ISOPROPYLMALATE/3-METHYLMALATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FFGAAGE 10
FGAAGE
Sbjct: 65 LFGAAGE 71




711|SequenceR|3560|3551|VLGKGIGKFF

>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 1 VLGKGIGKF 9
V+GKG+G F
Sbjct: 568 VMGKGLGSF 576


>sp|COBS_PYRFU|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LGKGIGKFF 10
LG+G+GK+F
Sbjct: 142 LGEGLGKYF 150


>sp|Y995_META3|UPF0288 protein Maeo_0995|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LGKGIGKFF 10
+G+GIGK F
Sbjct: 261 IGEGIGKVF 269


>sp|TIAS_THEVO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermoplasma volcanium

Query: 2 LGKGIGK 8
LG+GIGK
Sbjct: 58 LGRGIGK 64


>sp|RRP4_METTH|EXOSOME complex component Rrp4|Methanothermobacter thermautotrophicus

Query: 3 GKGIGKF 9
G+G+GKF
Sbjct: 132 GRGLGKF 138


>sp|COBS_PYRHO|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LGKGIGKFF 10
LGKG+G +F
Sbjct: 142 LGKGLGAYF 150


>sp|COBS_THEKO|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LGKGIGKFF 10
LGKG+G +F
Sbjct: 142 LGKGLGAYF 150


>sp|LEU1_PYRFU|2-ISOPROPYLMALATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LGKGIGKF 9
LGKG GK+
Sbjct: 383 LGKGKGKY 390


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 LGKGIGK 8
LGKG GK
Sbjct: 886 LGKGFGK 892


>sp|Y433_ARCFU|PROBABLE S-adenosyl-L-methionine-binding protein AF_0433|Archaeoglobus

Query: 1 VLGKGIGKF 9
V+G+GI KF
Sbjct: 350 VVGRGIVKF 358


>sp|G1PDH_PYRAR|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VLGKGIGK 8
+LG G+GK
Sbjct: 322 ILGSGLGK 329


>sp|CBID_METMJ|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VLGKGIGKF 9
V G+GIG F
Sbjct: 125 VPGEGIGSF 133


>sp|GUAAB_METMA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina mazei

Query: 1 VLGKGIG 7
VLGKG G
Sbjct: 232 VLGKGTG 238


>sp|GUAAB_METAC|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina

Query: 1 VLGKGIG 7
VLGKG G
Sbjct: 232 VLGKGTG 238


>sp|GYRB_ARCFU|DNA gyrase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LGKGIGKFF 10
+G GIGK F
Sbjct: 475 IGAGIGKDF 483


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LGKGIGKFF 10
LG+ GK+F
Sbjct: 74 LGRSSGKYF 82


>sp|COBS_PYRAB|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 LGKGIGKFF 10
LG+G+G +F
Sbjct: 142 LGQGLGAYF 150


>sp|MNTP_METBF|MANGANESE exporter MntP|Methanosarcina barkeri (strain Fusaro /

Query: 1 VLGKGIGKFF 10
VLG IG FF
Sbjct: 150 VLGHRIGHFF 159


>sp|COBS_THEON|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermococcus onnurineus (strain NA1)

Query: 2 LGKGIGKFF 10
LG+G+G +F
Sbjct: 142 LGQGLGAYF 150


>sp|TRUB_METJA|PROBABLE tRNA pseudouridine synthase B|Methanocaldococcus jannaschii (strain

Query: 2 LGKGIGK 8
L KGIGK
Sbjct: 275 LSKGIGK 281


>sp|CBID_METHJ|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VLGKGIGKF 9
V G+GIG++
Sbjct: 124 VFGEGIGRW 132


>sp|Y078_THEAC|UPF0284 protein Ta0078|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VLGKGIG 7
++GKGIG
Sbjct: 7 IIGKGIG 13


>sp|LYSJ_THEKO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 LGKGIGKFF 10
+GKGIG F
Sbjct: 228 MGKGIGNGF 236


>sp|CBID_SACI2|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VLGKGIGK 8
V GKG+GK
Sbjct: 96 VGGKGVGK 103


>sp|MANB_METJA|PHOSPHOMANNOMUTASE jannaschii (strain ATCC 43067

Query: 2 LGKGIGKFF 10
LGK IGK F
Sbjct: 29 LGKCIGKKF 37




712|SequenceR|3565|3556|RAVAGVLGKG

>sp|RNP3_ARCFU|RIBONUCLEASE P protein component 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RAVAGVLGK 9
RA+ G++GK
Sbjct: 52 RAIVGIIGK 60


>sp|AATB_NITMS|A-TYPE ATP synthase subunit B|Nitrosopumilus maritimus (strain SCM1)

Query: 1 RAVAGVLGKG 10
RA+AG++GK
Sbjct: 387 RALAGIVGKA 396


>sp|AATB_CENSY|A-TYPE ATP synthase subunit B|Cenarchaeum symbiosum (strain A)

Query: 1 RAVAGVLGKG 10
RA+AG++GK
Sbjct: 387 RALAGIVGKA 396


>sp|COBS_THEKO|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RAVAGVLG 8
RA+AG+LG
Sbjct: 179 RALAGILG 186




713|SequenceR|3570|3561|IGGTPRAVAG

>sp|CDC63_SULTO|ORC1-TYPE DNA replication protein 3|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IGGTPRAV 8
+GGTP+AV
Sbjct: 101 VGGTPQAV 108


>sp|CDC63_SULAC|ORC1-TYPE DNA replication protein 3|Sulfolobus acidocaldarius (strain ATCC

Query: 1 IGGTPRAV 8
+GGTP+AV
Sbjct: 101 VGGTPQAV 108


>sp|CDC63_SACS2|ORC1-TYPE DNA replication protein 3|Saccharolobus solfataricus (strain ATCC

Query: 1 IGGTPRAV 8
+GGTP+AV
Sbjct: 102 VGGTPQAV 109


>sp|OGT_METTH|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 2 GGTPRAVAG 10
GG+PR+ AG
Sbjct: 121 GGSPRSAAG 129


>sp|THII_ARCFU|PROBABLE tRNA sulfurtransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IGGTPRAVAG 10
IGG P VAG
Sbjct: 157 IGGLPVGVAG 166


>sp|BASB_HALS3|CHEMOTACTIC signal transduction system substrate-binding|Halobacterium

Query: 4 TPRAVAG 10
TPRAVAG
Sbjct: 328 TPRAVAG 334


>sp|THIC_METVS|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 IGGTPRAVAG 10
IGGT AV+G
Sbjct: 311 IGGTLAAVSG 320


>sp|THIC_METM7|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 IGGTPRAVAG 10
IGGT AV+G
Sbjct: 311 IGGTLAAVSG 320


>sp|THIC_METM6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 IGGTPRAVAG 10
IGGT AV+G
Sbjct: 311 IGGTLAAVSG 320


>sp|THIC_METMP|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IGGTPRAVAG 10
IGGT AV+G
Sbjct: 311 IGGTLAAVSG 320


>sp|TRUA_THEAC|TRNA pseudouridine synthase A|Thermoplasma acidophilum (strain ATCC

Query: 2 GGTPRAVAG 10
G +P AVAG
Sbjct: 66 GRSPEAVAG 74


>sp|CBIC_METJA|COBALT-PRECORRIN-8 methylmutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GGTPRAVA 9
GGTP AVA
Sbjct: 189 GGTPVAVA 196


>sp|THIC_METM5|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 IGGTPRAVAG 10
IGGT AV+G
Sbjct: 311 IGGTLAAVSG 320


>sp|GFCR_METBU|TRANSCRIPTIONAL regulator GfcR|Methanococcoides burtonii (strain DSM 6242

Query: 1 IGGTPRAVA 9
+G TP AVA
Sbjct: 169 VGATPIAVA 177


>sp|KDPB_HALSA|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 2 GGTPRAVA 9
GGTP A+A
Sbjct: 463 GGTPLAIA 470


>sp|KDPB_HALS3|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 2 GGTPRAVA 9
GGTP A+A
Sbjct: 463 GGTPLAIA 470


>sp|G1PDH_METHJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanospirillum hungatei JF-1 (strain

Query: 2 GGTPRAVAG 10
GGT R VAG
Sbjct: 54 GGTTREVAG 62


>sp|FOLD_HALSA|BIFUNCTIONAL protein FolD|Halobacterium salinarum (strain ATCC 700922

Query: 1 IGGTPR 6
+GGTPR
Sbjct: 130 VGGTPR 135


>sp|ECFA_METMP|ENERGY-COUPLING factor transporter ATP-binding protein|Methanococcus maripaludis

Query: 2 GGTPRAV 8
GGTPR +
Sbjct: 220 GGTPREI 226


>sp|GFCR1_METBF|TRANSCRIPTIONAL regulator GfcR 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 IGGTPRAVA 9
+G PRAVA
Sbjct: 170 MGAKPRAVA 178


>sp|DPHB_METTH|DIPHTHINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 IGGTPRAV 8
I G PRAV
Sbjct: 251 IAGAPRAV 258


>sp|PYRE_ARCFU|OROTATE phosphoribosyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 1 IGGTPRAVA 9
+GG P AVA
Sbjct: 71 LGGVPIAVA 79


>sp|ILVD_METS5|DIHYDROXY-ACID dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 IGGTPR 6
+GGTPR
Sbjct: 68 LGGTPR 73




714|SequenceR|3575|3566|SAMDVIGGTP

>sp|TRPD_METBU|ANTHRANILATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 1 SAMDVIGGTP 10
A D++GGTP
Sbjct: 257 KATDIVGGTP 266


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 4 DVIGGTP 10
D+IGG P
Sbjct: 296 DIIGGRP 302


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 AMDVIGGTP 10
A +VIGG P
Sbjct: 331 AKEVIGGRP 339


>sp|DNLI1_THEPD|DNA ligase 1|Thermofilum pendens (strain DSM 2475

Query: 2 AMDVIGGTP 10
A+ VIGG P
Sbjct: 274 AVAVIGGAP 282


>sp|FTTA_LOKSG|TRANSCRIPTION termination factor FttA|Lokiarchaeum sp. (strain GC14_75)

Query: 4 DVIGGTP 10
D+IGG P
Sbjct: 494 DIIGGGP 500


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 4 DVIGGTP 10
D+IGG P
Sbjct: 304 DIIGGRP 310


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 AMDVIGGTP 10
A ++IGG P
Sbjct: 328 AKEIIGGRP 336


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 AMDVIGGTP 10
A ++IGG P
Sbjct: 329 AKEIIGGRP 337


>sp|Y1337_METJA|UNCHARACTERIZED protein MJ1337|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AMDVIGGT 9
AM+ IGGT
Sbjct: 164 AMECIGGT 171


>sp|GATA_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcoides burtonii (strain DSM

Query: 1 SAMDVIGG 8
+ MDVIGG
Sbjct: 215 AVMDVIGG 222


>sp|IF2P_THEVO|PROBABLE translation initiation factor IF-2|Thermoplasma volcanium (strain

Query: 3 MDVIGGTP 10
+DVI G+P
Sbjct: 318 LDVISGSP 325


>sp|PDXT_PYRFU|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrococcus furiosus (strain ATCC

Query: 2 AMDVIGGTP 10
A +VIG TP
Sbjct: 92 AKEVIGATP 100


>sp|AROC_METBF|CHORISMATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 SAMDVIGGTP 10
SA DVI TP
Sbjct: 93 SAYDVIKDTP 102




715|SequenceR|3580|3571|GQFTSSAMDV

***** No hits found ******


716|SequenceR|3585|3576|AARQIGQFTS

>sp|CAS2A_ARCFU|CRISPR-ASSOCIATED endoribonuclease Cas2 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ARQIGQF 8
ARQ+G+F
Sbjct: 48 ARQVGKF 54


>sp|HIS7_METAC|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 AARQIGQFTS 10
A+ Q+GQF++
Sbjct: 122 ASPQVGQFST 131


>sp|HIS7_METBF|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 1 AARQIGQFTS 10
A+ Q+GQF++
Sbjct: 122 ASPQVGQFST 131




717|SequenceR|3590|3581|EETSEAARQI

>sp|PYRF_METAC|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina acetivorans (strain ATCC

Query: 1 EETSEAARQI 10
E EAARQI
Sbjct: 200 ESPKEAARQI 209




718|SequenceR|3595|3586|RLSSVEETSE

***** No hits found ******


719|SequenceR|3600|3591|ILRPPRLSSV

>sp|AMPA_AERPE|PROBABLE cytosol aminopeptidase|Aeropyrum pernix (strain ATCC 700893

Query: 3 RPPRLS 8
RPPRLS
Sbjct: 6 RPPRLS 11


>sp|TF2B_AERPE|TRANSCRIPTION initiation factor IIB|Aeropyrum pernix (strain ATCC 700893

Query: 3 RPPRLSS 9
RPPRLS+
Sbjct: 104 RPPRLSA 110


>sp|SYFA_SACS2|PHENYLALANINE--TRNA ligase alpha subunit|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ILRPPRLSSV 10
+LRP LSSV
Sbjct: 414 LLRPEILSSV 423




720|SequenceR|3605|3596|IGDEHILRPP

>sp|NADE_METTH|NH(3)-DEPENDENT NAD(+) synthetase|Methanothermobacter thermautotrophicus (strain

Query: 2 GDEHILRPP 10
G EH L+PP
Sbjct: 245 GSEHKLKPP 253


>sp|MSMJS_METJA|SMALL-CONDUCTANCE mechanosensitive channel MscMJ|Methanocaldococcus jannaschii

Query: 3 DEHILRP 9
DEHI++P
Sbjct: 127 DEHIIKP 133


>sp|RFRNP_METJA|RNA-FREE ribonuclease P|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IGDEHILR 8
IG+EHI++
Sbjct: 119 IGEEHIIK 126


>sp|Y919_METJA|UNCHARACTERIZED protein MJ0919|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IGDEHILRPP 10
+GDEH+L P
Sbjct: 106 LGDEHLLITP 115


>sp|SYH_PYRNV|HISTIDINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 EHILRPP 10
EH+ RPP
Sbjct: 6 EHLRRPP 12


>sp|CDC61_SULAC|ORC1-TYPE DNA replication protein 1|Sulfolobus acidocaldarius (strain ATCC

Query: 1 IGDEHILRPP 10
+G+E I+ PP
Sbjct: 198 LGEEEIIFPP 207


>sp|CDC67_HALSA|ORC1-TYPE DNA replication protein 7|Halobacterium salinarum (strain ATCC

Query: 1 IGDEHILRPP 10
+G+E I+ PP
Sbjct: 308 LGEEEIVFPP 317


>sp|RNH2_METB6|RIBONUCLEASE HII|Methanoregula boonei (strain DSM 21154

Query: 3 DEHILRPP 10
DEH + PP
Sbjct: 181 DEHRIPPP 188


>sp|TDXH2_PICTO|PEROXIREDOXIN 2|Picrophilus torridus (strain ATCC 700027

Query: 2 GDEHILRPP 10
GD+ IL PP
Sbjct: 171 GDKGILPPP 179


>sp|CDC6D_HALMA|ORC1-TYPE DNA replication protein 4|Haloarcula marismortui (strain ATCC 43049

Query: 1 IGDEHILRPP 10
+G+E I+ PP
Sbjct: 315 LGEEEIVFPP 324


>sp|MTBB1_METAC|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina acetivorans (strain ATCC

Query: 1 IGDEHILR 8
+ DEH++R
Sbjct: 414 LADEHVMR 421


>sp|MTHK_METTH|CALCIUM-GATED potassium channel MthK|Methanothermobacter thermautotrophicus

Query: 2 GDEHILRPP 10
GDE I+ PP
Sbjct: 299 GDELIIDPP 307


>sp|MTBB2_METAC|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina acetivorans (strain ATCC

Query: 1 IGDEHILR 8
+ DEH++R
Sbjct: 414 LADEHVMR 421


>sp|MTBB3_METAC|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina acetivorans (strain ATCC

Query: 1 IGDEHILR 8
+ DEH++R
Sbjct: 414 LADEHVMR 421


>sp|CDC61_METAC|ORC1-TYPE DNA replication protein 1|Methanosarcina acetivorans (strain ATCC

Query: 1 IGDEHILRPP 10
+G+E ++ PP
Sbjct: 203 LGEEELIFPP 212


>sp|CDC61_METMA|ORC1-TYPE DNA replication protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IGDEHILRPP 10
+G+E ++ PP
Sbjct: 203 LGEEELIFPP 212


>sp|AGLQ_HALVD|ARCHAEAL glycosylation protein Q|Haloferax volcanii (strain ATCC 29605

Query: 5 HILRPP 10
H LRPP
Sbjct: 233 HYLRPP 238


>sp|TMCA_HALVD|TRNA(MET) cytidine acetyltransferase TmcA|Haloferax volcanii (strain ATCC

Query: 1 IGDEHILR 8
+ DEH+LR
Sbjct: 429 LADEHLLR 436


>sp|ADH_SULTO|NAD-DEPENDENT alcohol dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IGDEHILRPP 10
IG+EH+ P
Sbjct: 106 IGEEHLCDSP 115


>sp|ADH_SULSR|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus sp. (strain RC3)

Query: 1 IGDEHILRPP 10
IG+EH+ P
Sbjct: 106 IGEEHLCDSP 115


>sp|ADH_SACS2|NAD-DEPENDENT alcohol dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IGDEHILRPP 10
IG+EH+ P
Sbjct: 106 IGEEHLCDSP 115


>sp|EF1A_THEPD|ELONGATION factor 1-alpha|Thermofilum pendens (strain DSM 2475

Query: 1 IGDEHILRPP 10
+GD+ I+ PP
Sbjct: 261 VGDKIIINPP 270


>sp|XDH1_HALVD|D-XYLOSE 1-dehydrogenase [NADP(+)] 1|Haloferax volcanii (strain ATCC 29605

Query: 1 IGDEHI 6
+GDEH+
Sbjct: 242 VGDEHV 247


>sp|ILVD_SULTO|DIHYDROXY-ACID dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 EHILRP 9
EHI+RP
Sbjct: 366 EHIVRP 371


>sp|COBQ_METKA|PROBABLE cobyric acid synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 IGDEHILRP 9
+GDE +L P
Sbjct: 199 LGDESLLEP 207


>sp|Y277_SULAC|UPF0282 protein Saci_0277|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IGDEHILRPP 10
I D H+LR P
Sbjct: 235 IIDHHVLRDP 244


>sp|DCD_HALWD|DCTP deaminase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GDEHILRP 9
GDE IL P
Sbjct: 73 GDEFILHP 80




721|SequenceR|3610|3601|DYPRIIGDEH

>sp|HDRD_METMA|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina mazei (strain

Query: 1 DYPRIIGDE 9
D+PR++G+E
Sbjct: 254 DWPRLLGEE 262


Query: 2 YPRIIGDEH 10
+P++IG H
Sbjct: 131 FPKLIGQYH 139


>sp|HDRD_METAC|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina acetivorans

Query: 1 DYPRIIGDE 9
D+PR++G+E
Sbjct: 254 DWPRLLGEE 262


Query: 2 YPRIIGDEH 10
+P++IG H
Sbjct: 131 FPKLIGQYH 139


>sp|CDC62_METMA|ORC1-TYPE DNA replication protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 YPRIIGDE 9
YP++I DE
Sbjct: 223 YPKVISDE 230


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DYPRIIGDE 9
D+PRI+G +
Sbjct: 641 DFPRILGGD 649


>sp|TRET_THELN|TREHALOSE synthase|Thermococcus litoralis (strain ATCC 51850

Query: 1 DYPRIIGDE 9
DY IIGDE
Sbjct: 16 DYREIIGDE 24


>sp|TRET_PYRFU|TREHALOSE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DYPRIIGDE 9
DY IIGDE
Sbjct: 16 DYREIIGDE 24


>sp|CAH_METJA|PROBABLE carbonic anhydrase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 YPRIIGD 8
YP IIGD
Sbjct: 59 YPTIIGD 65


>sp|MTM5_METJA|TYPE II methyltransferase M.MjaV|Methanocaldococcus jannaschii (strain

Query: 1 DYPRIIGD 8
+YP IIGD
Sbjct: 117 NYPNIIGD 124


>sp|SYS_PICTO|SERINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 DYPRIIGDEH 10
D PR GDE+
Sbjct: 111 DVPRCFGDEN 120


>sp|Y3507_METJA|UNCHARACTERIZED protein MJECL07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YPRIIGDEH 10
YPR + D H
Sbjct: 366 YPRYLKDAH 374


>sp|ARCS_HALVD|ARCHAEOSINE synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 DYPRIIG 7
DYPRII
Sbjct: 383 DYPRIIA 389


>sp|ILVC_METLZ|KETOL-ACID reductoisomerase (NADP(+))|Methanocorpusculum labreanum (strain

Query: 3 PRIIGDE 9
PR+IG+E
Sbjct: 263 PRVIGNE 269


>sp|MTRA2_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 2|Methanothermobacter

Query: 1 DYPRIIGD 8
D+P I+GD
Sbjct: 13 DWPHIVGD 20


>sp|ILVC_METBF|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina barkeri (strain Fusaro /

Query: 3 PRIIGDE 9
PRII DE
Sbjct: 264 PRIINDE 270


>sp|ILVC_METHJ|KETOL-ACID reductoisomerase (NADP(+))|Methanospirillum hungatei JF-1 (strain

Query: 3 PRIIGDE 9
PR+IG E
Sbjct: 263 PRVIGQE 269


>sp|Y956_ARCFU|UNCHARACTERIZED protein AF_0956|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DYPRIIGDEH 10
DY + +G EH
Sbjct: 29 DYRKALGSEH 38


>sp|MTRA2_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 2|Methanothermobacter marburgensis

Query: 1 DYPRIIGD 8
D+P I+GD
Sbjct: 14 DWPHIVGD 21


>sp|COBQ_THEKO|PROBABLE cobyric acid synthase|Thermococcus kodakarensis (strain ATCC

Query: 1 DYPRIIGDEH 10
++P++ GD H
Sbjct: 240 EFPKVRGDLH 249


>sp|DNLI2_HALWD|DNA ligase 2|Haloquadratum walsbyi (strain DSM 16790

Query: 2 YPRIIGDEH 10
+PR++G H
Sbjct: 587 FPRVVGIRH 595


>sp|Y614_PYRHO|UNCHARACTERIZED protein PH0614|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DYPRIIG 7
D PRI+G
Sbjct: 287 DLPRIVG 293


>sp|TRET_PYRHO|TREHALOSE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DYPRIIGDE 9
DY IIG+E
Sbjct: 17 DYKSIIGEE 25


>sp|DPHB_HALSA|DIPHTHINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DYPRIIGDEH 10
D+PR+ GD +
Sbjct: 173 DHPRVDGDAY 182


>sp|DPHB_HALS3|DIPHTHINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DYPRIIGDEH 10
D+PR+ GD +
Sbjct: 173 DHPRVDGDAY 182


>sp|ADEC_METBU|ADENINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PRIIGD 8
PR+IGD
Sbjct: 261 PRLIGD 266


>sp|CAPPA_METS5|PHOSPHOENOLPYRUVATE carboxylase|Metallosphaera sedula (strain ATCC 51363

Query: 3 PRIIGDE 9
PRI+G+E
Sbjct: 311 PRILGEE 317


>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PRIIGDE 9
P I+GDE
Sbjct: 237 PEIVGDE 243


>sp|RASEA_THEKO|ARCHAEOSINE synthase subunit beta|Thermococcus kodakarensis (strain ATCC

Query: 1 DYPRIIG 7
DY R+IG
Sbjct: 276 DYDRVIG 282


>sp|CCA_PICTO|CCA-ADDING enzyme|Picrophilus torridus (strain ATCC 700027

Query: 1 DYPRIIGD 8
DY +I+GD
Sbjct: 3 DYKKILGD 10


>sp|ENO_HALMA|ENOLASE marismortui (strain ATCC 43049

Query: 3 PRIIGDEH 10
PR+IG+ H
Sbjct: 66 PRLIGEVH 73


>sp|SPEE_AERPE|POLYAMINE aminopropyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PRIIGD 8
PRI+GD
Sbjct: 253 PRILGD 258


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 RIIGDEH 10
R+IGDE+
Sbjct: 222 RVIGDEY 228


>sp|DNLI_PICTO|DNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 DYPRIIGDE 9
+ PR++GD+
Sbjct: 487 EMPRLLGDK 495


>sp|PUR7_PYRFU|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YPRIIGDE 9
Y R+IG+E
Sbjct: 224 YKRLIGEE 231


>sp|KAD6_PYRAB|PUTATIVE adenylate kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 YPRIIGD 8
+PRIIG+
Sbjct: 89 HPRIIGE 95




722|SequenceR|3615|3606|ESEQRDYPRI

>sp|ARCS_HALVD|ARCHAEOSINE synthase|Haloferax volcanii (strain ATCC 29605

Query: 3 EQRDYPRI 10
E+ DYPRI
Sbjct: 380 ERNDYPRI 387


>sp|AATB_CENSY|A-TYPE ATP synthase subunit B|Cenarchaeum symbiosum (strain A)

Query: 3 EQRDYPR 9
EQR+YP+
Sbjct: 123 EQREYPK 129


>sp|AATB_NITMS|A-TYPE ATP synthase subunit B|Nitrosopumilus maritimus (strain SCM1)

Query: 3 EQRDYPR 9
EQR+YP+
Sbjct: 123 EQREYPK 129


>sp|Y1584_METJA|UNCHARACTERIZED protein MJ1584|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ESEQRDY 7
ESEQ DY
Sbjct: 137 ESEQGDY 143


>sp|SAT_THEON|SULFATE adenylyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 SEQRDYPRI 10
SEQ++YP +
Sbjct: 25 SEQKEYPSV 33


>sp|SAT_PYRAB|SULFATE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 SEQRDYPRI 10
SEQ +YP++
Sbjct: 25 SEQHEYPKV 33


>sp|Y614_PYRHO|UNCHARACTERIZED protein PH0614|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ESEQRDYPRI 10
E +Q D PRI
Sbjct: 282 EVKQEDLPRI 291


>sp|OGT_THEBM|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Thermococcus barophilus (strain DSM 11836

Query: 3 EQRDYPRI 10
E+ DYP+I
Sbjct: 60 EKSDYPKI 67


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 ESEQRDYPRI 10
E + RD PR+
Sbjct: 223 EVQNRDLPRV 232




723|SequenceR|3620|3611|LLDSGESEQR

>sp|Y4659_METAC|UPF0201 protein MA_4659|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LDSGESEQR 10
LD+ ESE+R
Sbjct: 42 LDAAESEKR 50


>sp|RNZ_PYRIL|RIBONUCLEASE Z|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LLDSGESEQ 9
LLD+GE Q
Sbjct: 36 LLDAGEGAQ 44


>sp|RNZ_PYRCJ|RIBONUCLEASE Z|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LLDSGESEQ 9
LLD+GE Q
Sbjct: 36 LLDAGEGAQ 44


>sp|RL30E_METMA|LARGE ribosomal subunit protein eL30|Methanosarcina mazei (strain ATCC

Query: 1 LLDSGESE 8
+LD+GES+
Sbjct: 90 ILDAGESD 97


>sp|RNZ_PYRNV|RIBONUCLEASE Z|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LLDSGESEQ 9
LLD+GE Q
Sbjct: 36 LLDAGEGAQ 44


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 GESEQR 10
GESEQR
Sbjct: 288 GESEQR 293


>sp|CBID_METBU|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LLDSGESE 8
L+DSGE E
Sbjct: 333 LMDSGEQE 340


>sp|FTSZ2_HALSA|CELL division protein FtsZ 2|Halobacterium salinarum (strain ATCC

Query: 2 LDSGESEQR 10
LD+ E+EQR
Sbjct: 9 LDNAEAEQR 17


>sp|FTSZ2_HALS3|CELL division protein FtsZ 2|Halobacterium salinarum (strain ATCC

Query: 2 LDSGESEQR 10
LD+ E+EQR
Sbjct: 9 LDNAEAEQR 17


>sp|AATC_HALVD|A-TYPE ATP synthase subunit C|Haloferax volcanii (strain ATCC 29605

Query: 1 LLDSGESEQ 9
LLD+GE E+
Sbjct: 139 LLDAGEIEE 147




724|SequenceR|3625|3616|KIHNELLDSG

>sp|RAD50_NANEQ|DNA double-strand break repair Rad50|Nanoarchaeum equitans (strain

Query: 3 HNELLDSG 10
HNELLD+G
Sbjct: 772 HNELLDTG 779


>sp|GFPS_METMA|GERANYLFARNESYL diphosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IHNELLDSG 10
IH++LLD G
Sbjct: 88 IHDDLLDQG 96


>sp|Y973_METJA|UNCHARACTERIZED protein MJ0973|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IHNELLDSG 10
I+NEL D G
Sbjct: 331 IYNELYDKG 339


>sp|Y2099_SACI3|PROTEIN M1627_2099|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 KIHNELLDS 9
K+ NELLD+
Sbjct: 243 KVKNELLDA 251


>sp|Y772_SACI1|PROTEIN YN1551_0772|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 KIHNELLDS 9
K+ NELLD+
Sbjct: 243 KVKNELLDA 251


>sp|Y2186_SACI2|PROTEIN LS215_2186|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 KIHNELLDS 9
K+ NELLD+
Sbjct: 243 KVKNELLDA 251


>sp|Y2147_SACI7|PROTEIN YG5714_2147|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 KIHNELLDS 9
K+ NELLD+
Sbjct: 243 KVKNELLDA 251


>sp|Y2028_SACI6|PROTEIN M164_2028|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KIHNELLDS 9
K+ NELLD+
Sbjct: 243 KVKNELLDA 251


>sp|Y2021_SACI4|PROTEIN M1425_2021|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KIHNELLDS 9
K+ NELLD+
Sbjct: 243 KVKNELLDA 251


>sp|SOR_ACIAM|SULFUR oxygenase/reductase|Acidianus ambivalens (Desulfurolobus

Query: 1 KIHNELLDS 9
++H+E+LD+
Sbjct: 275 QVHDEVLDT 283


>sp|GCSPA_METS5|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Metallosphaera

Query: 1 KIHNELLDSG 10
+IH+ELL G
Sbjct: 402 RIHSELLRRG 411


>sp|DNLI2_METBF|DNA ligase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 KIHNELLDSG 10
KI+ E LD+G
Sbjct: 398 KIYKEALDAG 407


>sp|DTDA_METPE|D-AMINOACYL-TRNA deacylase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 IHNELLDSG 10
IH E +D+G
Sbjct: 47 IHQERIDTG 55


>sp|RL15_SACS2|LARGE ribosomal subunit protein uL15|Saccharolobus solfataricus (strain

Query: 4 NELLDSG 10
NELL+SG
Sbjct: 77 NELLESG 83


>sp|FSR_METJA|COENZYME F420-dependent sulfite reductase|Methanocaldococcus jannaschii

Query: 4 NELLDSG 10
NE++DSG
Sbjct: 7 NEIVDSG 13


>sp|Y749_METJA|UNCHARACTERIZED protein MJ0749|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KIHNELL 7
KIHN+L+
Sbjct: 115 KIHNKLI 121


>sp|GGGPS_THEAC|GERANYLGERANYLGLYCERYL phosphate synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KIHNELLDSG 10
K+H L+D G
Sbjct: 16 KVHMTLIDPG 25


>sp|ARGC_METS3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KIHNELLDSG 10
KIH + DSG
Sbjct: 44 KIHPHIRDSG 53




725|SequenceR|3630|3621|EGELKKIHNE

>sp|CDC61_ARCFU|ORC1-TYPE DNA replication protein 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EGELKKIHN 9
EGELKK+ N
Sbjct: 395 EGELKKLAN 403


>sp|THIC_HALMA|PHOSPHOMETHYLPYRIMIDINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 EGELKKIH 8
EGEL+K+H
Sbjct: 77 EGELEKLH 84


>sp|RAD50_METKA|DNA double-strand break repair Rad50|Methanopyrus kandleri (strain AV19

Query: 1 EGELKKIHN 9
EGEL++ HN
Sbjct: 602 EGELERYHN 610


>sp|Y079_METJA|UNCHARACTERIZED protein MJ0079|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ELKKIHNE 10
ELKKI NE
Sbjct: 341 ELKKIRNE 348


>sp|G1PDH_METLZ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanocorpusculum labreanum (strain ATCC

Query: 1 EGELKKIHN 9
EG+ KKI N
Sbjct: 294 EGDWKKIRN 302


>sp|DMSA_HALSA|PUTATIVE dimethyl sulfoxide reductase catalytic|Halobacterium salinarum

Query: 1 EGELKKIHNE 10
+GE ++HN+
Sbjct: 739 DGEYVRVHND 748


>sp|DNLI_METVS|DNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 ELKKIHNE 10
ELKKI NE
Sbjct: 375 ELKKIENE 382


>sp|MPTA_THEAC|GTP cyclohydrolase MptA|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GELKKIH 8
GEL+K+H
Sbjct: 278 GELRKLH 284


>sp|HPRT_METFV|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothermus fervidus (strain ATCC

Query: 1 EGELKKIHNE 10
+GE+K I+NE
Sbjct: 179 DGEVKIINNE 188


>sp|MTNA_METJA|PUTATIVE methylthioribose-1-phosphate isomerase|Methanocaldococcus

Query: 3 ELKKIHNE 10
E KKIH E
Sbjct: 110 EAKKIHEE 117


>sp|ARLY_META3|ARGININOSUCCINATE lyase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GELKKIHN 9
ELKKI+N
Sbjct: 66 NELKKIYN 73


>sp|MBHLA_PYRFU|MEMBRANE-BOUND hydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GELKKIHN 9
GEL++IH+
Sbjct: 103 GELERIHS 110




726|SequenceR|3635|3626|HYRYTEGELK

>sp|IF2P_METS3|PROBABLE translation initiation factor IF-2|Methanobrevibacter smithii

Query: 1 HYRYTEGELK 10
HY+Y E E K
Sbjct: 555 HYKYIEREFK 564


>sp|HIS6_META3|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus aeolicus (strain

Query: 1 HYR-YTEGELK 10
HYR YT GELK
Sbjct: 253 HYREYTVGELK 263


>sp|AMPPA_PYRAB|AMP phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 2 YRYTEGEL 9
Y+++EGEL
Sbjct: 69 YQFSEGEL 76


>sp|HIS3_METJA|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HYRYTEGELK 10
HY+ +GELK
Sbjct: 109 HYKIEDGELK 118


>sp|RS4E_HALSA|SMALL ribosomal subunit protein eS4|Halobacterium salinarum (strain ATCC

Query: 1 HYRYTEGEL 9
H++Y EG L
Sbjct: 167 HFQYEEGAL 175


>sp|RS4E_HALS3|SMALL ribosomal subunit protein eS4|Halobacterium salinarum (strain ATCC

Query: 1 HYRYTEGEL 9
H++Y EG L
Sbjct: 167 HFQYEEGAL 175


>sp|RS4E_HALLT|SMALL ribosomal subunit protein eS4|Halorubrum lacusprofundi (strain ATCC

Query: 1 HYRYTEGEL 9
H+ Y EG L
Sbjct: 168 HFEYEEGAL 176


>sp|Y1627_PYRAE|PUTATIVE HTH-type transcriptional regulatory protein|Pyrobaculum aerophilum

Query: 2 YRYTEGELK 10
YRY GE++
Sbjct: 155 YRYERGEIE 163


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 YRYTEGEL 9
Y YTEGE+
Sbjct: 1197 YPYTEGEI 1204


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 YTEGEL 9
YTEGEL
Sbjct: 1142 YTEGEL 1147


>sp|RTCA_METMA|RNA 3'-terminal phosphate cyclase|Methanosarcina mazei (strain ATCC

Query: 1 HYRYTEGELK 10
H+R TEG K
Sbjct: 177 HFRKTEGNKK 186


>sp|COBQ_PICTO|PROBABLE cobyric acid synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 YRYTEGELK 10
YR+ E +LK
Sbjct: 365 YRFAENQLK 373


>sp|CDC61_THEAC|PUTATIVE ORC1-type DNA replication protein|Thermoplasma acidophilum (strain

Query: 3 RYTEGEL 9
RYT+GE+
Sbjct: 166 RYTKGEI 172


>sp|ENO_SULAC|ENOLASE acidocaldarius (strain ATCC 33909

Query: 3 RYTEGEL 9
RYT GEL
Sbjct: 257 RYTAGEL 263


>sp|RNP1_METTH|RIBONUCLEASE P protein component 1|Methanothermobacter thermautotrophicus

Query: 1 HYRYTEGEL 9
H+R +GEL
Sbjct: 62 HFRTPQGEL 70


>sp|HIS6_THEGJ|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus gammatolerans

Query: 1 HY-RYTEGELK 10
HY YT GELK
Sbjct: 228 HYGEYTVGELK 238


>sp|RL24_KORCO|LARGE ribosomal subunit protein uL24|Korarchaeum cryptofilum (strain

Query: 2 YRYTEGEL 9
YR TEGE+
Sbjct: 59 YRGTEGEV 66


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 RYTEGELK 10
RYTEG+ K
Sbjct: 363 RYTEGKWK 370


>sp|GLYA_SULAC|SERINE hydroxymethyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 YRYTEGE 8
YRY EG+
Sbjct: 50 YRYAEGK 56


>sp|RS4E_HALMA|SMALL ribosomal subunit protein eS4|Haloarcula marismortui (strain ATCC

Query: 1 HYRYTEGEL 9
H+ Y EG L
Sbjct: 168 HFEYEEGAL 176


>sp|TRUA_METST|TRNA pseudouridine synthase A|Methanosphaera stadtmanae (strain ATCC

Query: 1 HYRYTEGEL 9
+YR EGEL
Sbjct: 23 NYRTVEGEL 31


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HYRYTEG 7
HY YT G
Sbjct: 1776 HYIYTSG 1782




727|SequenceR|3640|3631|GPIACHYRYT

>sp|AGLS_HALVD|DOLICHOL phosphate-mannose mannosyltransferase|Haloferax volcanii (strain

Query: 2 PIACHYRYT 10
P CHYR +
Sbjct: 424 PSTCHYRLS 432


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GPIACHYRYT 10
G IAC ++Y+
Sbjct: 723 GRIACDFKYS 732


>sp|TFE_PYRNV|TRANSCRIPTION factor E|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 CHYRYT 10
CH RYT
Sbjct: 125 CHMRYT 130


>sp|TRUA_METTH|TRNA pseudouridine synthase A|Methanothermobacter thermautotrophicus

Query: 2 PIACHYRY 9
P+ HYRY
Sbjct: 104 PLERHYRY 111


>sp|TFE_PYRIL|TRANSCRIPTION factor E|Pyrobaculum islandicum (strain DSM 4184

Query: 5 CHYRYT 10
CH RYT
Sbjct: 125 CHMRYT 130


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 GPIACHYR 8
GP+ C Y+
Sbjct: 989 GPLVCAYK 996


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 GPIACHYR 8
GP+ C Y+
Sbjct: 989 GPLVCAYK 996


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 GPIACHYR 8
GP+ C Y+
Sbjct: 989 GPLVCAYK 996


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 1 GPIACHYR 8
GP+ C Y+
Sbjct: 989 GPLICSYK 996


>sp|Y2219_SACI2|MEMO1 family protein LS215_2219|Saccharolobus islandicus (strain

Query: 1 GPIACHYRY 9
GP+A H Y
Sbjct: 62 GPVAAHSYY 70


>sp|RL10E_PYRAB|LARGE ribosomal subunit protein uL16|Pyrococcus abyssi (strain GE5 /

Query: 2 PIACHYR 8
P+ C+YR
Sbjct: 157 PVKCYYR 163


>sp|Y2062_SULTO|MEMO1 family protein STK_20620|Sulfurisphaera tokodaii (strain DSM

Query: 1 GPIACHYRY 9
GP+A H Y
Sbjct: 62 GPVAAHAYY 70


>sp|Y2180_SACI7|MEMO1 family protein YG5714_2180|Saccharolobus islandicus (strain

Query: 1 GPIACHYRY 9
GP+A H Y
Sbjct: 62 GPVAAHSYY 70


>sp|Y739_SACI1|MEMO1 family protein YN1551_0739|Saccharolobus islandicus (strain

Query: 1 GPIACHYRY 9
GP+A H Y
Sbjct: 62 GPVAAHSYY 70


>sp|Y2134_SACI3|MEMO1 family protein M1627_2134|Saccharolobus islandicus (strain

Query: 1 GPIACHYRY 9
GP+A H Y
Sbjct: 62 GPVAAHSYY 70


>sp|Y2061_SACI6|MEMO1 family protein M164_2061|Saccharolobus islandicus (strain M.16.4

Query: 1 GPIACHYRY 9
GP+A H Y
Sbjct: 62 GPVAAHSYY 70


>sp|Y2054_SACI4|MEMO1 family protein M1425_2054|Saccharolobus islandicus (strain

Query: 1 GPIACHYRY 9
GP+A H Y
Sbjct: 62 GPVAAHSYY 70


>sp|Y066_SACS2|MEMO1 family protein SSO0066|Saccharolobus solfataricus (strain ATCC

Query: 1 GPIACHYRY 9
GP+A H Y
Sbjct: 62 GPVAAHSYY 70


>sp|Y089_SULAC|MEMO1 family protein Saci_0089|Sulfolobus acidocaldarius (strain ATCC

Query: 1 GPIACHYRY 9
GP+A H Y
Sbjct: 63 GPVAAHAYY 71


>sp|Y1771_AERPE|MEMO1 family protein APE_1771|Aeropyrum pernix (strain ATCC 700893

Query: 1 GPIACHYRY 9
GPIA H Y
Sbjct: 62 GPIAAHVYY 70


>sp|NIFD_METTL|NITROGENASE molybdenum-iron protein alpha chain|Methanothermococcus

Query: 1 GPIACHY 7
GPI C Y
Sbjct: 68 GPIGCAY 74


>sp|Y2139_METS5|MEMO1 family protein Msed_2139|Metallosphaera sedula (strain ATCC 51363

Query: 1 GPIACHYRY 9
GP+A H Y
Sbjct: 61 GPVAAHSYY 69




728|SequenceR|3645|3636|ITKKSGPIAC

>sp|Y1319_METJA|UNCHARACTERIZED sodium-dependent transporter MJ1319|Methanocaldococcus jannaschii

Query: 2 TKKSGPIA 9
TKKS P+A
Sbjct: 70 TKKSAPLA 77


>sp|MOBA_THEGJ|PROBABLE molybdenum cofactor guanylyltransferase|Thermococcus gammatolerans

Query: 3 KKSGPIAC 10
KKSG AC
Sbjct: 109 KKSGKTAC 116


>sp|EF2_METPE|ELONGATION factor 2|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 TKKSGPI 8
T+K+GPI
Sbjct: 472 TRKAGPI 478


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 ITKKSGPI 8
+TK SGP+
Sbjct: 736 VTKGSGPL 743


>sp|SYP_METST|PROLINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ITKKSGPIAC 10
I KK G I C
Sbjct: 410 INKKGGIITC 419


>sp|Y1222_METJA|UNCHARACTERIZED protein MJ1222|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ITKKSGPIAC 10
I KK G I C
Sbjct: 61 IAKKEGVIVC 70


>sp|COOS1_METAC|CARBON monoxide dehydrogenase 1|Methanosarcina acetivorans (strain ATCC

Query: 3 KKSGPIAC 10
K+ GPI C
Sbjct: 161 KQEGPILC 168




729|SequenceR|3650|3641|NTVMLITKKS

***** No hits found ******


730|SequenceR|3655|3646|CLVRRNTVML

>sp|COBD_METM7|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 1 CLVRRNTVML 10
C+V RNT L
Sbjct: 129 CIVSRNTSEL 138


>sp|COBD_METMP|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 1 CLVRRNT 7
C+V RNT
Sbjct: 129 CIVSRNT 135


>sp|COBD_META3|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus aeolicus (strain

Query: 1 CLVRRNT 7
C+V RNT
Sbjct: 129 CIVSRNT 135




731|SequenceR|3660|3651|EVEKICLVRR

>sp|GLMS_METTH|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanothermobacter

Query: 1 EVEKICLV 8
EVE+IC V
Sbjct: 283 EVERICFV 290


>sp|RFHPS_METJA|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EVEKIC 6
EVEKIC
Sbjct: 219 EVEKIC 224


>sp|KORA_ARCFU|2-OXOGLUTARATE synthase subunit KorA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EVEKICLVR 9
EVE++C R
Sbjct: 314 EVERVCCCR 322


>sp|Y1621_METJA|UNCHARACTERIZED protein MJ1621|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VEKICL 7
VEKICL
Sbjct: 38 VEKICL 43


>sp|PURP_NITMS|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 EVEKICLVRR 10
E+EK+ +V+R
Sbjct: 130 EIEKLSIVKR 139


>sp|MTD_METAC|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina

Query: 1 EVEKICL 7
EVE++CL
Sbjct: 222 EVEQVCL 228


>sp|TRPC_PYRNV|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 EVEKICLV 8
EVEK CL+
Sbjct: 210 EVEKACLL 217


>sp|MTD_METMA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina mazei

Query: 1 EVEKICL 7
E+E++CL
Sbjct: 222 EIEQVCL 228


>sp|TRPC_PYRAR|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 EVEKICLV 8
EVEK C++
Sbjct: 210 EVEKACML 217


>sp|RIFK_PYRIL|RIBOFLAVIN kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 VEKICLVRR 10
EK+CL R+
Sbjct: 27 AEKLCLTRQ 35




732|SequenceR|3665|3656|MLGLIEVEKI

>sp|CDC64_HALSA|ORC1-TYPE DNA replication protein 4|Halobacterium salinarum (strain ATCC

Query: 2 LGLIEVEKI 10
LG++E+EKI
Sbjct: 365 LGVVEIEKI 373


>sp|HIS1_THEON|ATP phosphoribosyltransferase|Thermococcus onnurineus (strain NA1)

Query: 3 GLIEVEKI 10
GL+EVEKI
Sbjct: 162 GLVEVEKI 169


>sp|DHAS_ARCFU|ASPARTATE-SEMIALDEHYDE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LGLIEVEK 9
LGLIEV+K
Sbjct: 126 LGLIEVQK 133


>sp|RS4E_STAMF|SMALL ribosomal subunit protein eS4|Staphylothermus marinus (strain ATCC

Query: 1 MLGLIEVEK 9
+LGLIE++K
Sbjct: 109 VLGLIEIDK 117


>sp|TRPF_METTH|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 MLGLIEVEK 9
+LGLI VE+
Sbjct: 34 LLGLIHVER 42


>sp|HIS1_THEGJ|ATP phosphoribosyltransferase|Thermococcus gammatolerans (strain DSM

Query: 3 GLIEVEKI 10
GL+EV+K+
Sbjct: 162 GLVEVDKV 169




733|SequenceR|3670|3661|QWDVCMLGLI

>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 QWDVCM 6
+WDVC+
Sbjct: 439 EWDVCI 444


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 WDVCMLGL 9
WD MLG+
Sbjct: 540 WDYVMLGI 547


>sp|KCY_METPE|CYTIDYLATE kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 QWDVCMLGLI 10
+W V LGLI
Sbjct: 157 RWSVGQLGLI 166


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 WDVCMLG 8
WD MLG
Sbjct: 614 WDYIMLG 620


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 2 WDVCMLG 8
WD MLG
Sbjct: 548 WDYIMLG 554


>sp|Y1178_METJA|UNCHARACTERIZED glycosyltransferase MJ1178|Methanocaldococcus jannaschii (strain

Query: 2 WDVCMLGL 9
W+ C++G+
Sbjct: 335 WEKCVMGV 342




734|SequenceR|3675|3666|DEFPCQWDVC

>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DEFPCQWDV 9
D+FP +WD+
Sbjct: 606 DDFPFKWDI 614


>sp|ATGT_KORCO|TRNA-GUANINE(15) transglycosylase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 DEFPCQWDVC 10
+EFPC VC
Sbjct: 274 EEFPCSCPVC 283


>sp|ARCSA_METAC|ARCHAEOSINE synthase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 2 EFPCQWDVC 10
EFPC+ VC
Sbjct: 210 EFPCRCRVC 218


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DEFPCQWD 8
D+FP +WD
Sbjct: 598 DDFPFKWD 605


>sp|ATGT_PYRHO|TRNA-GUANINE(15) transglycosylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DEFPCQWDVC 10
D FPC VC
Sbjct: 275 DYFPCSCPVC 284


>sp|ARCS_HALVD|ARCHAEOSINE synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 DEFPCQWDVC 10
DE PC + C
Sbjct: 185 DELPCACEAC 194


>sp|TRPB2_SACS2|TRYPTOPHAN synthase beta chain 2|Saccharolobus solfataricus (strain ATCC

Query: 1 DEFPCQW 7
DE P QW
Sbjct: 12 DEIPAQW 18


>sp|TRF2_THEVO|TRICORN protease-interacting factor F2|Thermoplasma volcanium (strain ATCC

Query: 1 DEFPCQWDV 9
D F QWDV
Sbjct: 306 DSFSKQWDV 314


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 1 DEFPCQWDV 9
D F QWDV
Sbjct: 306 DSFSKQWDV 314


>sp|ATGT_SULAC|TRNA-GUANINE(15) transglycosylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DEFPCQWDVC 10
D FPC +C
Sbjct: 271 DYFPCSCPIC 280


>sp|ATGT_META3|TRNA-GUANINE(15) transglycosylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DEFPCQWDVC 10
++FPC VC
Sbjct: 276 EKFPCSCPVC 285


>sp|SURE_METMP|5'-NUCLEOTIDASE SurE|Methanococcus maripaludis (strain DSM 14266

Query: 1 DEFPC 5
DEFPC
Sbjct: 165 DEFPC 169


>sp|SURE_METM7|5'-NUCLEOTIDASE SurE|Methanococcus maripaludis (strain C7 /

Query: 1 DEFPC 5
DEFPC
Sbjct: 167 DEFPC 171


>sp|SURE_METM6|5'-NUCLEOTIDASE SurE|Methanococcus maripaludis (strain C6 /

Query: 1 DEFPC 5
DEFPC
Sbjct: 167 DEFPC 171


>sp|SURE_METM5|5'-NUCLEOTIDASE SurE|Methanococcus maripaludis (strain C5 /

Query: 1 DEFPC 5
DEFPC
Sbjct: 167 DEFPC 171


>sp|ATGT_METS3|TRNA-GUANINE(15) transglycosylase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 EFPCQWDVC 10
E PC +VC
Sbjct: 270 EMPCSCEVC 278


>sp|SYT_METBF|THREONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DEFPCQWDVC 10
D+F Q+D+C
Sbjct: 370 DQFKKQYDLC 379


>sp|ATGT_ARCFU|TRNA-GUANINE(15) transglycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FPCQWDVC 10
FPC+ VC
Sbjct: 271 FPCKCPVC 278


>sp|RF1_THEVO|PEPTIDE chain release factor subunit|Thermoplasma volcanium (strain ATCC

Query: 2 EFPCQWDVC 10
E P +W VC
Sbjct: 344 EEPSEWPVC 352


>sp|ATGT_METVS|TRNA-GUANINE(15) transglycosylase|Methanococcus vannielii (strain ATCC 35089

Query: 3 FPCQWDVC 10
FPC VC
Sbjct: 278 FPCSCKVC 285


>sp|ATGT_HALMA|TRNA-GUANINE(15) transglycosylase|Haloarcula marismortui (strain ATCC 43049

Query: 3 FPCQWDVC 10
FPC VC
Sbjct: 276 FPCHCPVC 283


>sp|ATGT_METMP|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain DSM 14266

Query: 3 FPCQWDVC 10
FPC VC
Sbjct: 278 FPCTCKVC 285


>sp|ATGT_METM7|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C7 /

Query: 3 FPCQWDVC 10
FPC VC
Sbjct: 278 FPCTCKVC 285


>sp|ATGT_METM6|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C6 /

Query: 3 FPCQWDVC 10
FPC VC
Sbjct: 278 FPCTCKVC 285


>sp|ATGT_METM5|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C5 /

Query: 3 FPCQWDVC 10
FPC VC
Sbjct: 278 FPCTCKVC 285


>sp|ADEC_METB6|ADENINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 1 DEFPCQWD 8
D F C W+
Sbjct: 31 DAFSCSWE 38


>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 2 EFPCQWDVC 10
E PC VC
Sbjct: 273 EMPCSCSVC 281


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DEFPCQWD 8
D+FP +W+
Sbjct: 580 DDFPFKWE 587


>sp|ATGT_THEON|TRNA-GUANINE(15) transglycosylase|Thermococcus onnurineus (strain NA1)

Query: 3 FPCQWDVC 10
FPC VC
Sbjct: 273 FPCSCPVC 280


>sp|ATGT_THEKO|TRNA-GUANINE(15) transglycosylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 FPCQWDVC 10
FPC VC
Sbjct: 273 FPCSCPVC 280


>sp|ATGT_PYRAB|TRNA-GUANINE(15) transglycosylase|Pyrococcus abyssi (strain GE5 /

Query: 3 FPCQWDVC 10
FPC VC
Sbjct: 277 FPCSCPVC 284


>sp|ATGT_METJA|TRNA-GUANINE(15) transglycosylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FPCQWDVC 10
FPC VC
Sbjct: 279 FPCSCPVC 286


>sp|ATGT_HALSA|TRNA-GUANINE(15) transglycosylase|Halobacterium salinarum (strain ATCC 700922

Query: 3 FPCQWDVC 10
FPC VC
Sbjct: 277 FPCDCPVC 284


>sp|Y1157_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FPCQWDVC 10
FPC ++C
Sbjct: 321 FPCSGNIC 328


>sp|SYE_METB6|GLUTAMATE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 DEFPCQWDVC 10
+ FP +D+C
Sbjct: 175 ERFPIYYDLC 184


>sp|TRPB2_SULTO|TRYPTOPHAN synthase beta chain 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DEFPCQW 7
DE P +W
Sbjct: 12 DEIPTEW 18


>sp|ATGT_SULTO|TRNA-GUANINE(15) transglycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 FPCQWDVC 10
FPC +C
Sbjct: 273 FPCSCPIC 280


>sp|ATGT_SACS2|TRNA-GUANINE(15) transglycosylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 FPCQWDVC 10
FPC +C
Sbjct: 276 FPCSCPIC 283


>sp|ATGT_METST|TRNA-GUANINE(15) transglycosylase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 EFPCQWDVC 10
E PC VC
Sbjct: 272 EMPCSCRVC 280


>sp|AGLD_HALVD|GLYCOSYLTRANSFERASE AglD|Haloferax volcanii (strain ATCC 29605

Query: 2 EFPCQWD 8
EFP W+
Sbjct: 217 EFPVDWE 223


>sp|AGLUS_ARCFU|ARCHAEAL glutamate synthase [NADPH]|Archaeoglobus fulgidus (strain ATCC

Query: 5 CQWDVC 10
C W +C
Sbjct: 434 CNWGIC 439


>sp|ATGT_AERPE|TRNA-GUANINE(15) transglycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DEFPCQWDVC 10
D PC VC
Sbjct: 268 DYLPCSCPVC 277


>sp|ACDD_METJA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanocaldococcus

Query: 2 EFPCQW 7
E PC+W
Sbjct: 151 EDPCEW 156


>sp|DUT_AERPE|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Aeropyrum pernix

Query: 1 DEFPCQWDVC 10
D C++ VC
Sbjct: 54 DRIQCEYGVC 63


>sp|SYK_HALMA|LYSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 EFPCQWDVC 10
E+P QW++
Sbjct: 253 EWPAQWEIL 261


>sp|PYRC_AERPE|DIHYDROOROTASE pernix (strain ATCC 700893

Query: 5 CQWDVC 10
C WD C
Sbjct: 354 CLWDGC 359




735|SequenceR|3680|3671|PPFVFDEFPC

>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 1 PPFVFDEFP 9
P F FD+FP
Sbjct: 359 PRFAFDKFP 367


>sp|TRPF_METB6|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanoregula boonei (strain DSM 21154

Query: 2 PFVFDEFP 9
PFVF+++P
Sbjct: 84 PFVFEKYP 91


>sp|MTNA_METAC|PUTATIVE methylthioribose-1-phosphate isomerase|Methanosarcina acetivorans

Query: 1 PPFVFDE 7
PPF+ DE
Sbjct: 339 PPFLLDE 345


>sp|RIBA_PICTO|GTP cyclohydrolase-2|Picrophilus torridus (strain ATCC 700027

Query: 1 PPFVFDEF 8
PP FDEF
Sbjct: 172 PPTKFDEF 179


>sp|PURP2_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 2|Methanosarcina mazei (strain ATCC

Query: 1 PPFVFDEFP 9
PP +D FP
Sbjct: 51 PPKFYDAFP 59


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 PPFVFDE 7
PP FDE
Sbjct: 56 PPLTFDE 62


>sp|PURP_METTP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothrix thermoacetophila (strain

Query: 1 PPFVFDEFP 9
PP +D FP
Sbjct: 51 PPRFYDAFP 59


>sp|MT51_METJA|PUTATIVE type II methyltransferase M.MJ0563P|Methanocaldococcus jannaschii

Query: 1 PPFVFDEF 8
PP FDEF
Sbjct: 55 PPKAFDEF 62


>sp|TRUA_METS3|TRNA pseudouridine synthase A|Methanobrevibacter smithii (strain ATCC

Query: 3 FVFDEFPC 10
FV+D++ C
Sbjct: 248 FVYDDYAC 255


>sp|XPD_THEAC|ATP-DEPENDENT DNA helicase XPD|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 FVFDEFP 9
F+FDE P
Sbjct: 125 FLFDELP 131


>sp|Y1472_METJA|UNCHARACTERIZED protein MJ1472|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PPFVFDEFP 9
PP DE+P
Sbjct: 476 PPIGVDEYP 484


>sp|RSMA_PYRAE|PROBABLE ribosomal RNA small subunit|Pyrobaculum aerophilum (strain ATCC

Query: 1 PPFVFDEFP 9
PP+VFD P
Sbjct: 154 PPYVFDPPP 162


>sp|PURP_METBU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcoides burtonii (strain DSM

Query: 1 PPFVFDEFP 9
PP +D FP
Sbjct: 51 PPRFYDAFP 59


>sp|EF1A_SULTO|ELONGATION factor 1-alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PPFVFDEF 8
PP V DEF
Sbjct: 319 PPTVADEF 326


>sp|EF1A_SULAC|ELONGATION factor 1-alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PPFVFDEF 8
PP V DEF
Sbjct: 319 PPTVADEF 326


>sp|EF1A_DESMO|ELONGATION factor 1-alpha|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 1 PPFVFDEF 8
PP V DEF
Sbjct: 321 PPTVADEF 328


>sp|SAT_STAMF|SULFATE adenylyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 4 VFDEFP 9
+FDEFP
Sbjct: 303 IFDEFP 308


>sp|RS2_METM7|SMALL ribosomal subunit protein uS2|Methanococcus maripaludis (strain C7

Query: 2 PFVFDEF 8
PF +D+F
Sbjct: 188 PFTYDDF 194


>sp|EF1A_SACS2|ELONGATION factor 1-alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PPFVFDEF 8
PP V DEF
Sbjct: 319 PPTVADEF 326


>sp|EF1A_METBU|ELONGATION factor 1-alpha|Methanococcoides burtonii (strain DSM 6242

Query: 1 PPFVFDEF 8
PP V DEF
Sbjct: 310 PPSVADEF 317


>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PPFVFDEF 8
PP V DEF
Sbjct: 311 PPTVADEF 318


>sp|IF5A_META3|TRANSLATION initiation factor 5A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 VFDEFPC 10
V DE PC
Sbjct: 19 VIDEVPC 25


>sp|EF1A_METAC|ELONGATION factor 1-alpha|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PPFVFDEF 8
PP V DEF
Sbjct: 311 PPKVADEF 318


>sp|EF1A_METMA|ELONGATION factor 1-alpha|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PPFVFDEF 8
PP V DEF
Sbjct: 311 PPKVADEF 318


>sp|EF1A_METB6|ELONGATION factor 1-alpha|Methanoregula boonei (strain DSM 21154

Query: 1 PPFVFDEF 8
PP V DEF
Sbjct: 311 PPTVADEF 318


>sp|SAT_PYRAB|SULFATE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 4 VFDEFP 9
+FDEFP
Sbjct: 300 LFDEFP 305




736|SequenceR|3685|3676|NESVSPPFVF

>sp|TNAA_HALSA|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ESVSPPFV 9
E+V PP+V
Sbjct: 305 EAVEPPYV 312


>sp|TNAA_HALS3|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 29341

Query: 2 ESVSPPFV 9
E+V PP+V
Sbjct: 305 EAVEPPYV 312




737|SequenceR|3690|3681|SIKLVNESVS

>sp|ENDA_METMA|TRNA-SPLICING endonuclease|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SIKLVNESVS 10
S+KL+ ESV+
Sbjct: 130 SVKLLQESVA 139




738|SequenceR|3695|3686|GQEKVSIKLV

>sp|Y1437_METM6|UPF0280 protein MmarC6_1437|Methanococcus maripaludis (strain C6 /

Query: 2 QEKVSIK 8
QEK+SIK
Sbjct: 5 QEKISIK 11


>sp|NADE_METBU|NH(3)-DEPENDENT NAD(+) synthetase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GQEKVSIKL 9
GQE+V +KL
Sbjct: 217 GQERVHLKL 225


>sp|ILVD_ARCFU|DIHYDROXY-ACID dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GQEKVSIK 8
G EKVSIK
Sbjct: 151 GGEKVSIK 158


>sp|Y482_METM7|UPF0280 protein MmarC7_0482|Methanococcus maripaludis (strain C7 /

Query: 2 QEKVSIK 8
QEK+SIK
Sbjct: 5 QEKISIK 11


>sp|Y1269_PYRHO|UPF0098 protein PH1269|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GQEKVSIKL 9
G+EK+S+K+
Sbjct: 40 GEEKMSLKV 48




739|SequenceR|3700|3691|KKHFLGQEKV

>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain ATCC

Query: 3 HFLGQEKV 10
H++GQEK+
Sbjct: 523 HYVGQEKI 530


>sp|CDC45_SACS2|CELL division control protein 45|Saccharolobus solfataricus (strain

Query: 1 KKHFLGQ 7
KK+FLGQ
Sbjct: 88 KKYFLGQ 94


>sp|ECFA_METTH|ENERGY-COUPLING factor transporter ATP-binding protein|Methanothermobacter

Query: 3 HFLGQEK 9
HFLG+EK
Sbjct: 282 HFLGEEK 288


>sp|DHYS2_ARCFU|PROBABLE deoxyhypusine synthase 2|Archaeoglobus fulgidus (strain ATCC

Query: 2 KHFLGQEKV 10
+HF+G E V
Sbjct: 76 RHFMGSEHV 84


>sp|GGGPS_HALMA|GERANYLGERANYLGLYCERYL phosphate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 KHFLGQEKV 10
+H LGQE V
Sbjct: 152 EHLLGQEIV 160


>sp|DNAG_METMJ|DNA primase DnaG|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KKHFLGQEKV 10
K +LG+EKV
Sbjct: 152 KLEYLGEEKV 161


>sp|CAS1_THEKO|CRISPR-ASSOCIATED endonuclease Cas1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KHFLGQEK 9
KH+L QEK
Sbjct: 93 KHYLDQEK 100


>sp|UPPS_METJA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanocaldococcus

Query: 3 HFLGQEKV 10
H+LG EKV
Sbjct: 74 HYLGAEKV 81


>sp|Y725_METJA|UNCHARACTERIZED protein MJ0725|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KKHFLGQEKV 10
KK F G EKV
Sbjct: 150 KKGFAGTEKV 159




740|SequenceR|3705|3696|QNASDKKHFL

>sp|THIE_METMA|THIAMINE-PHOSPHATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QNASDKKHF 9
Q ASDK H
Sbjct: 14 QKASDKNHL 22


>sp|COBD_METMP|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 2 NASDKKHFL 10
N DKKH L
Sbjct: 136 NELDKKHVL 144




741|SequenceR|3710|3701|KRVCGQNASD

>sp|Y1438_METS3|MEMO1 family protein Msm_1438|Methanobrevibacter smithii (strain ATCC

Query: 2 RVCGQNASD 10
++CG+N S+
Sbjct: 248 KMCGKNTSE 256


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KRVCGQNASD 10
KR+ QNA D
Sbjct: 299 KRIVFQNAGD 308


>sp|HYPA_METAC|HYDROGENASE maturation factor HypA|Methanosarcina acetivorans (strain ATCC

Query: 3 VCGQNA 8
VCG+NA
Sbjct: 107 VCGKNA 112


>sp|PYRG_METMP|CTP synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KRVCGQNAS 9
+ VCG NA+
Sbjct: 396 RHVCGLNAN 404


>sp|THIE_METAC|THIAMINE-PHOSPHATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KRVCGQNA 8
KR+CG A
Sbjct: 71 KRICGDRA 78




742|SequenceR|3715|3706|DKLYVKRVCG

>sp|SPCS_METKA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanopyrus kandleri (strain AV19 /

Query: 2 KLYVKRVCG 10
+LYV+RV G
Sbjct: 373 RLYVRRVTG 381


>sp|NFI_AERPE|ENDONUCLEASE V|Aeropyrum pernix (strain ATCC 700893

Query: 2 KLYVKRVC 9
++Y+ RVC
Sbjct: 70 RVYISRVC 77


>sp|Y993_METJA|PUTATIVE hydrogenase expression/formation protein

Query: 1 DKLYVKRVCG 10
DKL + VCG
Sbjct: 25 DKLKIMHVCG 34


>sp|RL37A_METST|LARGE ribosomal subunit protein eL43|Methanosphaera stadtmanae (strain

Query: 1 DKLYVKRVC 9
DK++ K VC
Sbjct: 30 DKMHAKHVC 38


>sp|PYLS_METMA|PYRROLYSINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KLYVKRVCG 10
K+Y++ CG
Sbjct: 35 KIYIEMACG 43


>sp|PYLS_METAC|PYRROLYSINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KLYVKRVCG 10
K+Y++ CG
Sbjct: 35 KIYIEMACG 43


>sp|Y163_METJA|UNCHARACTERIZED protein MJ0163|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YVKRVCG 10
Y+K++CG
Sbjct: 107 YIKKLCG 113


>sp|Y1360_METJA|UNCHARACTERIZED protein MJ1360|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DKLYVK 6
DKLYVK
Sbjct: 11 DKLYVK 16


>sp|PYLS_METBA|PYRROLYSINE--TRNA ligase|Methanosarcina barkeri

Query: 2 KLYVKRVCG 10
K+Y++ CG
Sbjct: 35 KIYIEMACG 43


>sp|PYLS_METBF|PYRROLYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 KLYVKRVCG 10
K+Y++ CG
Sbjct: 35 KIYIEMACG 43


>sp|NFI_SULTO|ENDONUCLEASE V|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 VKRVCG 10
VKR+CG
Sbjct: 30 VKRICG 35


>sp|RL22_METKA|LARGE ribosomal subunit protein uL22|Methanopyrus kandleri (strain AV19 /

Query: 1 DKLYVKRV 8
D+LY+K +
Sbjct: 116 DRLYIKHI 123


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DKLYVKRV 8
+KLY+KR+
Sbjct: 887 EKLYMKRL 894


>sp|THIE_METAC|THIAMINE-PHOSPHATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 VKRVCG 10
+KR+CG
Sbjct: 70 IKRICG 75


>sp|HIS4_SACS2|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Saccharolobus solfataricus

Query: 1 DKLYVKRVC 9
+++Y+K +C
Sbjct: 61 NEMYIKEIC 69




743|SequenceR|3720|3711|EATATDKLYV

>sp|AATB_PICTO|A-TYPE ATP synthase subunit B|Picrophilus torridus (strain ATCC 700027

Query: 3 TATDKLYV 10
T TDKLY+
Sbjct: 396 TETDKLYL 403




744|SequenceR|3725|3716|ANCAREATAT

>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 2 NCAREATAT 10
NC REA A
Sbjct: 744 NCEREADAV 752




745|SequenceR|3730|3721|QADEIANCAR

>sp|PDXT_METS3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanobrevibacter smithii

Query: 2 ADEIANC 8
ADE+ANC
Sbjct: 39 ADEVANC 45


>sp|RS172_METAC|SMALL ribosomal subunit protein uS17B|Methanosarcina acetivorans (strain

Query: 3 DEIANCAR 10
D++ANC R
Sbjct: 157 DQLANCQR 164


>sp|TRM1_SULTO|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfurisphaera tokodaii

Query: 1 QADEIANCAR 10
+ DEI NC +
Sbjct: 363 EIDEIVNCIK 372


>sp|SECF_THEGJ|PROTEIN-EXPORT membrane protein SecF|Thermococcus gammatolerans (strain DSM 15229

Query: 2 ADEIANCAR 10
ADEI+N R
Sbjct: 120 ADEISNAIR 128


>sp|ARLY_ARCFU|ARGININOSUCCINATE lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DEIANCAR 10
DE+A C R
Sbjct: 104 DEVATCLR 111


>sp|ARLY_METAR|ARGININOSUCCINATE lyase|Methanocella arvoryzae (strain DSM 22066

Query: 3 DEIANCAR 10
DE+A C R
Sbjct: 114 DEVATCIR 121


>sp|SYFB_METTP|PHENYLALANINE--TRNA ligase beta subunit|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 ADEIANCAR 10
A+E+A C R
Sbjct: 293 AEELAECLR 301


>sp|ARLY_METMA|ARGININOSUCCINATE lyase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DEIANCAR 10
DE+A C R
Sbjct: 110 DEVATCIR 117


>sp|ARLY_METTP|ARGININOSUCCINATE lyase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 DEIANCAR 10
DE+A C R
Sbjct: 105 DEVATCIR 112


>sp|ARLY_METHJ|ARGININOSUCCINATE lyase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 DEIANCAR 10
DE+A C R
Sbjct: 113 DEVATCLR 120


>sp|ARLY_METBF|ARGININOSUCCINATE lyase|Methanosarcina barkeri (strain Fusaro /

Query: 3 DEIANCAR 10
DE+A C R
Sbjct: 110 DEVATCIR 117


>sp|ARLY_METLZ|ARGININOSUCCINATE lyase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 DEIANCAR 10
DE+A C R
Sbjct: 113 DEVATCLR 120


>sp|ARLY_METAC|ARGININOSUCCINATE lyase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DEIANCAR 10
DE+A C R
Sbjct: 110 DEVATCIR 117


>sp|ARLY_METBU|ARGININOSUCCINATE lyase|Methanococcoides burtonii (strain DSM 6242

Query: 3 DEIANCAR 10
DE+A C R
Sbjct: 110 DEVATCIR 117


>sp|PANB_NATPD|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Natronomonas pharaonis (strain ATCC

Query: 1 QADEIANCAR 10
+AD + NC R
Sbjct: 90 EADAVDNCGR 99




746|SequenceR|3735|3726|QQRTSQADEI

***** No hits found ******


747|SequenceR|3740|3731|KMLKQQQRTS

***** No hits found ******


748|SequenceR|3745|3736|RVSSQKMLKQ

***** No hits found ******


749|SequenceR|3753|3741|SPLQPRLLRVSSQ

>sp|AROE_HALSA|SHIKIMATE dehydrogenase (NADP(+))|Halobacterium salinarum (strain ATCC 700922

Query: 1 SPLQPRLLR 9
SP++ RLLR
Sbjct: 213 SPVETRLLR 221


>sp|AROE_HALS3|SHIKIMATE dehydrogenase (NADP(+))|Halobacterium salinarum (strain ATCC 29341

Query: 1 SPLQPRLLR 9
SP++ RLLR
Sbjct: 213 SPVETRLLR 221


>sp|AROE_METBF|SHIKIMATE dehydrogenase (NADP(+))|Methanosarcina barkeri (strain Fusaro /

Query: 1 SPLQPRLLR 9
+PL+ RLLR
Sbjct: 225 NPLETRLLR 233


>sp|AROE_NATPD|SHIKIMATE dehydrogenase (NADP(+))|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SPLQPRLLR 9
+PL+ RLLR
Sbjct: 211 APLETRLLR 219


>sp|RAD50_METAC|DNA double-strand break repair Rad50|Methanosarcina acetivorans (strain

Query: 1 SPLQPRLL 8
+PL+P+LL
Sbjct: 967 TPLEPKLL 974


>sp|AROE_METMA|SHIKIMATE dehydrogenase (NADP(+))|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SPLQPRLLR 9
+PL+ RLLR
Sbjct: 225 NPLETRLLR 233


>sp|SYTC_SULTO|THREONINE--TRNA ligase catalytic subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SPLQPRLLRVS 11
SP+Q R+L +S
Sbjct: 432 SPVQVRILPIS 442


>sp|RAD50_METMA|DNA double-strand break repair Rad50|Methanosarcina mazei (strain ATCC

Query: 1 SPLQPRLL 8
+PL+P+LL
Sbjct: 963 TPLEPKLL 970


>sp|PYRI_THEPD|ASPARTATE carbamoyltransferase regulatory chain|Thermofilum pendens (strain

Query: 2 PLQPRLLRVS 11
P+ PR +RVS
Sbjct: 121 PVTPRFVRVS 130




THE END