VP13C_HUMAN Blast Output
Archaea
1|Sequence|1|10|MVLESVVADL

>sp|PDXS_HALWD|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Haloquadratum walsbyi (strain

Query: 1 MVLESVVADL 10
M LESV AD+
Sbjct: 51 MALESVPADI 60


>sp|PDXS_METKA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanopyrus kandleri (strain

Query: 1 MVLESVVADL 10
MVLE V AD+
Sbjct: 42 MVLEKVPADI 51


>sp|HELS_PYRCJ|ATP-DEPENDENT DNA helicase Hel308|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 VLESVVADL 10
VLES+VA L
Sbjct: 156 VLESIVAKL 164


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LESVVADL 10
L+SV+ADL
Sbjct: 786 LKSVIADL 793




2|Sequence|6|15|VVADLLNRFL

>sp|RF1_THEAC|PEPTIDE chain release factor subunit|Thermoplasma acidophilum (strain ATCC

Query: 4 DLLNRFL 10
DL+NRFL
Sbjct: 282 DLMNRFL 288


>sp|SODF_PYRAE|SUPEROXIDE dismutase [Fe]|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VADLLNRFL 10
+ADL+N+F
Sbjct: 100 IADLINKFF 108




3|Sequence|11|20|LNRFLGDYVE

>sp|PCKG_THESM|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus sibiricus (strain DSM 12597

Query: 1 LNRFLGDYVE 10
LN FL Y+E
Sbjct: 27 LNEFLAKYIE 36


>sp|RL35A_PYRWO|LARGE ribosomal subunit protein eL33|Pyrococcus woesei

Query: 5 LGDYVE 10
LGDYVE
Sbjct: 80 LGDYVE 85


>sp|RL35A_PYRHO|LARGE ribosomal subunit protein eL33|Pyrococcus horikoshii (strain ATCC

Query: 5 LGDYVE 10
LGDYVE
Sbjct: 80 LGDYVE 85


>sp|RL35A_PYRFU|LARGE ribosomal subunit protein eL33|Pyrococcus furiosus (strain ATCC

Query: 5 LGDYVE 10
LGDYVE
Sbjct: 80 LGDYVE 85


>sp|RL35A_PYRAB|LARGE ribosomal subunit protein eL33|Pyrococcus abyssi (strain GE5 /

Query: 5 LGDYVE 10
LGDYVE
Sbjct: 80 LGDYVE 85


>sp|AMPPA_METM5|AMP phosphorylase|Methanococcus maripaludis (strain C5 /

Query: 5 LGDYVE 10
LGDYVE
Sbjct: 412 LGDYVE 417


>sp|ALBA_METTP|DNA/RNA-BINDING protein Alba|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 NRFLGDYV 9
+RFLGD V
Sbjct: 53 SRFLGDVV 60


>sp|SYTC_AERPE|THREONINE--TRNA ligase catalytic subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 LNRFLGDYVE 10
+ RFLG Y+E
Sbjct: 317 IERFLGVYLE 326


>sp|AMPPA_METMP|AMP phosphorylase|Methanococcus maripaludis (strain DSM 14266

Query: 5 LGDYVE 10
LGDY+E
Sbjct: 412 LGDYIE 417


>sp|Y015_METJA|UNCHARACTERIZED protein MJ0015|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NRFLGDYVE 10
R +GDYV+
Sbjct: 47 KRLIGDYVK 55


>sp|SFSA_PYRCJ|SUGAR fermentation stimulation protein homolog|Pyrobaculum calidifontis

Query: 1 LNRFLG 6
LNRFLG
Sbjct: 18 LNRFLG 23


>sp|ENO2_METHJ|ENOLASE 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LNRFLGD 7
+N FLGD
Sbjct: 407 INEFLGD 413


>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RFLGDYVE 10
RF G+YV+
Sbjct: 149 RFKGEYVD 156


>sp|ILVD_PYRAB|DIHYDROXY-ACID dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 3 RFLGDYVE 10
RF G+YV+
Sbjct: 149 RFKGEYVD 156


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LNRFLGDYVE 10
LN GDY+E
Sbjct: 65 LNVEAGDYIE 74


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LNRFLGDYVE 10
+++ LG+YVE
Sbjct: 535 MHKSLGNYVE 544


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LNRFLGDYVE 10
+++ LG+YVE
Sbjct: 598 MHKSLGNYVE 607


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 LNRFLGDYVE 10
+++ LG+YVE
Sbjct: 598 MHKSLGNYVE 607


>sp|COBQ_METKA|PROBABLE cobyric acid synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 NRFLGD 7
N+FLGD
Sbjct: 196 NKFLGD 201


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LNRFLGDYVE 10
+++ LG+YVE
Sbjct: 595 MHKSLGNYVE 604


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LNRFLGDYVE 10
L +LG+Y+E
Sbjct: 455 LGEYLGNYLE 464


>sp|OGG1_METS5|8-OXOGUANINE DNA glycosylase/AP lyase|Metallosphaera sedula (strain ATCC 51363

Query: 3 RFLGDYVE 10
RF DY+E
Sbjct: 149 RFFSDYLE 156


>sp|BIOA_METJA|ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NRFLGDYVE 10
N+FLG++ E
Sbjct: 316 NQFLGEFGE 324




4|Sequence|16|25|GDYVENLNKS

>sp|AROD_METKA|3-DEHYDROQUINATE dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 2 DYVENLNKS 10
DY+ENL+ S
Sbjct: 34 DYLENLDMS 42


>sp|MTRA_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina acetivorans (strain

Query: 3 YVENLN 8
YVENLN
Sbjct: 113 YVENLN 118


>sp|MTRA_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 3 YVENLNKS 10
YVENLN +
Sbjct: 113 YVENLNAA 120


>sp|MTRA_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina barkeri (strain Fusaro

Query: 3 YVENLNK 9
YVENLN+
Sbjct: 113 YVENLNE 119


>sp|PCNA_HALMA|DNA polymerase sliding clamp|Haloarcula marismortui (strain ATCC 43049

Query: 2 DYVENLNKS 10
DY++N+NK+
Sbjct: 198 DYLKNMNKA 206


>sp|Y2000_PYRAB|UNCHARACTERIZED protein Orf2|Pyrococcus abyssi (strain GE5 /

Query: 3 YVENLN 8
YVENLN
Sbjct: 348 YVENLN 353


>sp|SIHH_METJA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DYVENLNK 9
+Y ENLNK
Sbjct: 104 EYYENLNK 111


>sp|SFSA_PYRAR|SUGAR fermentation stimulation protein homolog|Pyrobaculum arsenaticum

Query: 1 GDYVENLNK 9
GD+V LN+
Sbjct: 12 GDFVRRLNR 20


>sp|NPD_THESM|NAD-DEPENDENT protein deacylase|Thermococcus sibiricus (strain DSM 12597

Query: 2 DYVENLNKS 10
DY+ENL +S
Sbjct: 128 DYMENLLES 136


>sp|SYFB_METLZ|PHENYLALANINE--TRNA ligase beta subunit|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GDYVENL 7
GD VENL
Sbjct: 440 GDVVENL 446


>sp|THII_METS3|PROBABLE tRNA sulfurtransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 GDYVENLNK 9
G+ +ENLNK
Sbjct: 55 GECLENLNK 63


>sp|SIHH_METMP|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 2 DYVENLNK 9
+Y ENLNK
Sbjct: 104 EYYENLNK 111


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GDYVEN 6
GD+VEN
Sbjct: 442 GDFVEN 447


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 GDYVEN 6
GD+VEN
Sbjct: 441 GDFVEN 446


>sp|SYT_METAR|THREONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 DYVENLNKS 10
+Y+++LNK+
Sbjct: 443 NYIDSLNKA 451


>sp|HUTH_THEAC|PROBABLE histidine ammonia-lyase|Thermoplasma acidophilum (strain ATCC

Query: 1 GDYVEN 6
GDY+EN
Sbjct: 87 GDYLEN 92


>sp|PCNA_HALSA|DNA polymerase sliding clamp|Halobacterium salinarum (strain ATCC

Query: 2 DYVENLNKS 10
DY++++NK+
Sbjct: 198 DYLKDMNKA 206


>sp|PCNA_HALS3|DNA polymerase sliding clamp|Halobacterium salinarum (strain ATCC 29341

Query: 2 DYVENLNKS 10
DY++++NK+
Sbjct: 198 DYLKDMNKA 206


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 GDYVEN 6
GD+VEN
Sbjct: 444 GDFVEN 449


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 GDYVEN 6
GD+VEN
Sbjct: 451 GDFVEN 456


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GDYVEN 6
GD+VEN
Sbjct: 757 GDFVEN 762




5|Sequence|21|30|NLNKSQLKLG

>sp|TRPD_META3|ANTHRANILATE phosphoribosyltransferase|Methanococcus aeolicus (strain ATCC

Query: 2 LNKSQLKLG 10
LN+S++K+G
Sbjct: 24 LNESEIKIG 32


>sp|BIOB_METVS|BIOTIN synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LNKSQLK 8
LNKSQLK
Sbjct: 148 LNKSQLK 154




6|Sequence|26|35|QLKLGIWGGN

>sp|CCA_METBF|CCA-ADDING enzyme|Methanosarcina barkeri (strain Fusaro /

Query: 2 LKLGIWGGN 10
+K G+W GN
Sbjct: 332 IKTGVWSGN 340


>sp|FLPA_METMP|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis (strain

Query: 2 LKLGIWGGN 10
+ +GIW GN
Sbjct: 222 MMVGIWKGN 230


>sp|FLPA_METM6|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis (strain

Query: 2 LKLGIWGGN 10
+ +GIW GN
Sbjct: 222 MMVGIWKGN 230


>sp|FLPA_METM5|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis (strain

Query: 2 LKLGIWGGN 10
+ +GIW GN
Sbjct: 222 MMVGIWKGN 230


>sp|FERB_SULME|FERREDOXIN B|Sulfuracidifex metallicus (Sulfolobus metallicus)

Query: 3 KLGIWG 8
KLGIWG
Sbjct: 29 KLGIWG 34


>sp|FLPA_METVS|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus vannielii (strain

Query: 4 LGIWGGN 10
+GIW GN
Sbjct: 224 VGIWKGN 230


>sp|TRPB2_METMA|TRYPTOPHAN synthase beta chain 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 LGIWGGN 10
+ +WGGN
Sbjct: 184 MTLWGGN 190


>sp|TRPB2_METAC|TRYPTOPHAN synthase beta chain 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 6 IWGGN 10
+WGGN
Sbjct: 186 LWGGN 190


>sp|Y808_METJA|UNCHARACTERIZED protein MJ0808|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KLGIW 7
KLGIW
Sbjct: 204 KLGIW 208


>sp|KDPC_HALSA|POTASSIUM-TRANSPORTING ATPase KdpC subunit|Halobacterium salinarum (strain ATCC 700922

Query: 4 LGIWG 8
LGIWG
Sbjct: 173 LGIWG 177


>sp|KDPC_HALS3|POTASSIUM-TRANSPORTING ATPase KdpC subunit|Halobacterium salinarum (strain ATCC 29341

Query: 4 LGIWG 8
LGIWG
Sbjct: 173 LGIWG 177


>sp|FAU1_AERPE|PROBABLE ribonuclease FAU-1|Aeropyrum pernix (strain ATCC 700893

Query: 2 LKLGIWGG 9
++ G+WGG
Sbjct: 290 VREGLWGG 297


>sp|RL4_THEGJ|LARGE ribosomal subunit protein uL4|Thermococcus gammatolerans (strain

Query: 3 KLGIW 7
KLGIW
Sbjct: 163 KLGIW 167


>sp|NEP_NATMA|HALOLYSIN-LIKE extracellular serine protease Nep|Natrialba magadii

Query: 5 GIWGGN 10
G WGGN
Sbjct: 445 GGWGGN 450


>sp|RS3_THEKO|SMALL ribosomal subunit protein uS3|Thermococcus kodakarensis (strain

Query: 1 QLKLGIWG 8
QLKLG+ G
Sbjct: 170 QLKLGVIG 177


>sp|ARGC_METAR|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 2 LKLGIWGG 9
LK+GI GG
Sbjct: 2 LKIGIVGG 9


>sp|RL4_PYRHO|LARGE ribosomal subunit protein uL4|Pyrococcus horikoshii (strain ATCC

Query: 3 KLGIW 7
KLGIW
Sbjct: 163 KLGIW 167


>sp|RL4_PYRFU|LARGE ribosomal subunit protein uL4|Pyrococcus furiosus (strain ATCC

Query: 3 KLGIW 7
KLGIW
Sbjct: 163 KLGIW 167


>sp|RL4_PYRAB|LARGE ribosomal subunit protein uL4|Pyrococcus abyssi (strain GE5 /

Query: 3 KLGIW 7
KLGIW
Sbjct: 163 KLGIW 167


>sp|AMYA_PYRFU|ALPHA-AMYLASE furiosus (strain ATCC 43587

Query: 3 KLGIWGG 9
K GIW G
Sbjct: 218 KFGIWPG 224


>sp|PYRB_STAMF|ASPARTATE carbamoyltransferase catalytic subunit|Staphylothermus marinus

Query: 2 LKLGIWGG 9
L LG+W G
Sbjct: 304 LVLGVWRG 311


>sp|ARAD_SACS2|ARABINONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 KLGIW 7
KLGIW
Sbjct: 218 KLGIW 222


>sp|RL4_THESM|LARGE ribosomal subunit protein uL4|Thermococcus sibiricus (strain DSM

Query: 3 KLGIW 7
KLGIW
Sbjct: 163 KLGIW 167


>sp|SECY_HALSA|PROTEIN translocase subunit SecY|Halobacterium salinarum (strain ATCC

Query: 4 LGIWGGN 10
LG++GGN
Sbjct: 323 LGVYGGN 329




7|Sequence|31|40|IWGGNVALDN

>sp|TRM56_STAMF|TRNA (cytidine(56)-2'-O)-methyltransferase|Staphylothermus marinus

Query: 2 WGGNVALD 9
WGGN+ +D
Sbjct: 55 WGGNLYID 62


>sp|TRPB2_METMA|TRYPTOPHAN synthase beta chain 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IWGGNV 6
+WGGNV
Sbjct: 186 LWGGNV 191


>sp|TRPB2_METAC|TRYPTOPHAN synthase beta chain 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IWGGNV 6
+WGGNV
Sbjct: 186 LWGGNV 191


>sp|EF2_THEON|ELONGATION factor 2|Thermococcus onnurineus (strain NA1)

Query: 1 IWGGNVALDN 10
++ GN+ LDN
Sbjct: 538 VYNGNIFLDN 547


>sp|EF2_THESM|ELONGATION factor 2|Thermococcus sibiricus (strain DSM 12597

Query: 1 IWGGNVALDN 10
I+ GN+ LDN
Sbjct: 538 IYNGNMFLDN 547


>sp|EF2_THEKO|ELONGATION factor 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IWGGNVALDN 10
I+ GN+ LDN
Sbjct: 538 IYNGNMFLDN 547


>sp|EF2_PYRWO|ELONGATION factor 2|Pyrococcus woesei

Query: 1 IWGGNVALDN 10
I+ GN+ LDN
Sbjct: 538 IYNGNMFLDN 547


>sp|EF2_PYRFU|ELONGATION factor 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IWGGNVALDN 10
I+ GN+ LDN
Sbjct: 538 IYNGNMFLDN 547


>sp|SYY_METVS|TYROSINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 WGGNVALDN 10
+GGN+ L+N
Sbjct: 274 YGGNLVLNN 282


>sp|SUDHA_PYRFU|SULFIDE dehydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IWGGNVALD 9
I GGN A+D
Sbjct: 299 IGGGNTAMD 307


>sp|Y1398_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1398|Methanocaldococcus

Query: 1 IWGGNVALDN 10
I+G NV+L+N
Sbjct: 26 IYGINVSLEN 35


>sp|TRM56_METMA|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosarcina mazei

Query: 2 WGGNVALDN 10
WGGN + N
Sbjct: 55 WGGNFYIKN 63


>sp|EF2_PYRAB|ELONGATION factor 2|Pyrococcus abyssi (strain GE5 /

Query: 1 IWGGNVALDN 10
++ GN+ LDN
Sbjct: 538 VYNGNMFLDN 547


>sp|TRM56_NITMS|TRNA (cytidine(56)-2'-O)-methyltransferase|Nitrosopumilus maritimus

Query: 2 WGGNVALD 9
WGGN ++
Sbjct: 54 WGGNFEIE 61


>sp|PYRC_THEKO|DIHYDROOROTASE kodakarensis (strain ATCC BAA-918

Query: 1 IWGGNVALDN 10
I GG++ +DN
Sbjct: 16 IVGGSIGIDN 25


>sp|EF2_PYRHO|ELONGATION factor 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IWGGNVALDN 10
I+ GN+ +DN
Sbjct: 538 IYNGNMFIDN 547


>sp|TRPB2_SACS2|TRYPTOPHAN synthase beta chain 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 WGGNVAL 8
WG +VAL
Sbjct: 139 WGSSVAL 145


>sp|AATA_CENSY|A-TYPE ATP synthase subunit A|Cenarchaeum symbiosum (strain A)

Query: 2 WGGNVALD 9
WG NV+ D
Sbjct: 447 WGENVSKD 454


>sp|TRPF_SACS2|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GGNVALDN 10
GG +++DN
Sbjct: 152 GGKISIDN 159


>sp|GLK_PYRCJ|GLUCOKINASE calidifontis (strain DSM 21063

Query: 1 IWGGNVALDN 10
I GG++AL+N
Sbjct: 232 IVGGSIALNN 241


>sp|DNAJ_THEAC|CHAPERONE protein DnaJ|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IWGGNVALD 9
I+GGN A D
Sbjct: 99 IFGGNFASD 107


>sp|Y2205_ARCFU|UNCHARACTERIZED protein AF_2205|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IWGGNVALDN 10
+W NV++ N
Sbjct: 423 VWASNVSIPN 432




8|Sequence|36|45|VALDNLQIKE

>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VALDNLQIKE 10
++LDNL++ E
Sbjct: 473 ISLDNLKLPE 482




9|Sequence|41|50|LQIKENALSE

>sp|RL10E_ARCFU|LARGE ribosomal subunit protein uL16|Archaeoglobus fulgidus (strain

Query: 1 LQIKENAL 8
+QI+ENAL
Sbjct: 54 VQIRENAL 61


>sp|AGLUS_METJA|ARCHAEAL glutamate synthase [NADPH]|Methanocaldococcus jannaschii (strain

Query: 1 LQIKENALS 9
+ IKENA+S
Sbjct: 63 ITIKENAIS 71


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LQIKENALSE 10
L ++EN LSE
Sbjct: 115 LYVRENPLSE 124


>sp|TF2B_METJA|TRANSCRIPTION initiation factor IIB|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LQIKENA 7
LQIKENA
Sbjct: 353 LQIKENA 359


>sp|ARDF_PYRFU|ARCHAEAL ribosome dimerization factor|Pyrococcus furiosus (strain ATCC 43587

Query: 3 IKENALS 9
IKENA+S
Sbjct: 282 IKENAIS 288




10|Sequence|46|55|NALSELDVPF

>sp|IF2P_HALWD|PROBABLE translation initiation factor IF-2|Haloquadratum walsbyi (strain

Query: 1 NALSELDVPF 10
NAL E DVP
Sbjct: 397 NALKEADVPI 406


>sp|DPHB_METST|DIPHTHINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 NALSELDVPF 10
N + +LDVPF
Sbjct: 45 NLIEKLDVPF 54


>sp|SEPS_METAR|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 ALSELDVPF 10
ALS+ D+P+
Sbjct: 315 ALSQYDIPY 323


>sp|THI4_HALWD|THIAMINE thiazole synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 NALSELDVPF 10
+ L ELDVP+
Sbjct: 88 SVLDELDVPY 97


>sp|CDC6O_HALMA|ORC1-TYPE DNA replication protein 15|Haloarcula marismortui (strain ATCC

Query: 5 ELDVPF 10
ELDVPF
Sbjct: 373 ELDVPF 378


>sp|CDC6A_HALSA|ORC1-TYPE DNA replication protein 10|Halobacterium salinarum (strain ATCC

Query: 5 ELDVPF 10
ELDVPF
Sbjct: 378 ELDVPF 383


>sp|TRM1_THEGJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus gammatolerans

Query: 3 LSELDVPF 10
+ ELDVPF
Sbjct: 314 VEELDVPF 321


>sp|SYP_METAR|PROLINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 ALSELDVPF 10
LSEL+VP
Sbjct: 98 GLSELEVPL 106


>sp|GGR_PYRFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NALSELDVPF 10
N E D+P+
Sbjct: 50 NVFKEFDIPY 59


>sp|DTDA_THEKO|D-AMINOACYL-TRNA deacylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 SELDVP 9
SELDVP
Sbjct: 144 SELDVP 149


>sp|TRM1_THEKO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus kodakarensis

Query: 5 ELDVPF 10
ELDVPF
Sbjct: 313 ELDVPF 318


>sp|TRM1_METBU|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcoides burtonii

Query: 5 ELDVPF 10
ELD+PF
Sbjct: 323 ELDIPF 328


>sp|SPEE_ARCFU|POLYAMINE aminopropyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LSELDVPF 10
L+ELD PF
Sbjct: 50 LTELDEPF 57


>sp|RAD50_METJA|DNA double-strand break repair Rad50|Methanocaldococcus jannaschii

Query: 2 ALSELDVPF 10
A SE D+P+
Sbjct: 882 AFSEFDLPY 890


>sp|GUAAA_ARCFU|GMP synthase [glutamine-hydrolyzing] subunit A|Archaeoglobus fulgidus

Query: 3 LSELDVP 9
L ELDVP
Sbjct: 63 LKELDVP 69


>sp|SYW_SACS2|TRYPTOPHAN--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 ELDVPF 10
E+DVPF
Sbjct: 299 EIDVPF 304


>sp|BIOD_HALMT|ATP-DEPENDENT dethiobiotin synthetase BioD|Haloferax mediterranei (strain ATCC

Query: 3 LSELDVP 9
+SELDVP
Sbjct: 130 VSELDVP 136


>sp|Y236_METTH|UNCHARACTERIZED protein MTH_236|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 LSELDVP 9
+SELD+P
Sbjct: 108 VSELDIP 114


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 NALSELDVPF 10
NALSEL+ +
Sbjct: 882 NALSELETQY 891


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 NALSELDVPF 10
NALSEL+ +
Sbjct: 882 NALSELETQY 891


>sp|RPO1N_HALMO|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halococcus morrhuae (Micrococcus

Query: 1 NALSELDVPF 10
NALSEL+ +
Sbjct: 248 NALSELETQY 257


>sp|IF2P_HALLT|PROBABLE translation initiation factor IF-2|Halorubrum lacusprofundi (strain

Query: 1 NALSELDVP 9
NAL E +VP
Sbjct: 374 NALREAEVP 382




11|Sequence|51|60|LDVPFKVKAG

>sp|SFSA_SACI2|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 2 DVPFKVKAG 10
D+PF+VK G
Sbjct: 12 DLPFRVKEG 20


>sp|SFSA_SACI6|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 2 DVPFKVKAG 10
D+PF+VK G
Sbjct: 12 DLPFRVKEG 20


>sp|SFSA_SACI4|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 2 DVPFKVKAG 10
D+PF+VK G
Sbjct: 12 DLPFRVKEG 20


>sp|SFSA_SACI3|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 2 DVPFKVKAG 10
D+PF+VK G
Sbjct: 12 DLPFRVKEG 20


>sp|UVRB_HALSA|UVRABC system protein B|Halobacterium salinarum (strain ATCC 700922

Query: 2 DVPFKVKA 9
DVPF+V+A
Sbjct: 16 DVPFRVEA 23


>sp|KCY_HALWD|CYTIDYLATE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LDVPFKVKAG 10
LD P V+AG
Sbjct: 98 LDAPLNVRAG 107


>sp|RFCS_SACS2|REPLICATION factor C small subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 DVPFKV 7
D+PFKV
Sbjct: 103 DIPFKV 108


>sp|RTCA_METMA|RNA 3'-terminal phosphate cyclase|Methanosarcina mazei (strain ATCC

Query: 1 LDVPFKVK 8
LDV FK+K
Sbjct: 334 LDVKFKIK 341


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 DVPFKV 7
DVPFK+
Sbjct: 1086 DVPFKI 1091


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LDVPFKVK 8
LD+P++VK
Sbjct: 408 LDLPWRVK 415


>sp|RFCS_NANEQ|REPLICATION factor C small subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 DVPFKV 7
DVPFK+
Sbjct: 97 DVPFKI 102


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LDVPFKVK 8
+D+P++VK
Sbjct: 394 IDIPWRVK 401


>sp|SUFS_HALVD|CYSTEINE desulfurase|Haloferax volcanii (strain ATCC 29605

Query: 2 DVPFKVKAG 10
D+P+K +AG
Sbjct: 287 DLPWKFEAG 295


>sp|HIS6_NITMS|IMIDAZOLE glycerol phosphate synthase subunit|Nitrosopumilus maritimus

Query: 1 LDVPFKVKAG 10
+D+PF V G
Sbjct: 73 IDIPFTVGGG 82


>sp|ARLY_SULAC|ARGININOSUCCINATE lyase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LDVPFKVKAG 10
+DV K+KAG
Sbjct: 370 IDVANKIKAG 379


>sp|RF1_METKA|PEPTIDE chain release factor subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 DVPFKVKAG 10
DVP K KAG
Sbjct: 169 DVPGKHKAG 177


>sp|HTPX_PYRAE|PROTEASE HtpX homolog|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LDVPFKVKA 9
L PFK+KA
Sbjct: 124 LGAPFKLKA 132


>sp|CBID_METB6|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanoregula boonei (strain DSM 21154

Query: 2 DVPFKVKAG 10
D+P K +AG
Sbjct: 80 DLPVKARAG 88


>sp|HTPX_PYRIL|PROTEASE HtpX homolog|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LDVPFKVKA 9
L PF++KA
Sbjct: 124 LGAPFRIKA 132


>sp|HTPX_PYRCJ|PROTEASE HtpX homolog|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LDVPFKVKA 9
L PFK+KA
Sbjct: 122 LGAPFKLKA 130


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 2 DVPFKVKAG 10
D+ FK++AG
Sbjct: 476 DLKFKMRAG 484




12|Sequence|56|65|KVKAGQIDKL

>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VKAGQIDKL 10
+KA +IDKL
Sbjct: 462 IKANKIDKL 470


>sp|HEM3_METBU|PROBABLE porphobilinogen deaminase|Methanococcoides burtonii (strain DSM

Query: 1 KVKAGQID 8
K+KAGQ D
Sbjct: 151 KLKAGQYD 158




13|Sequence|61|70|QIDKLTLKIP

>sp|RADA_HALSA|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 1 QIDKLTLKIP 10
QI KLT IP
Sbjct: 78 QIGKLTWNIP 87


>sp|RADA_HALS3|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 1 QIDKLTLKIP 10
QI KLT IP
Sbjct: 78 QIGKLTWNIP 87


>sp|TF2B1_THEKO|TRANSCRIPTION initiation factor IIB 1|Thermococcus kodakarensis (strain ATCC

Query: 2 IDKLTLKIP 10
++KL LK+P
Sbjct: 290 VEKLNLKVP 298


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 1 QIDKLTLKI 9
+IDK TLK+
Sbjct: 477 EIDKETLKL 485




14|Sequence|66|75|TLKIPWKNLY

>sp|NADE_AERPE|NH(3)-DEPENDENT NAD(+) synthetase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LKIPWKNL 9
LKIPW+ +
Sbjct: 232 LKIPWEEI 239


>sp|FLAB5_PYRHO|FLAGELLIN B5|Pyrococcus horikoshii (strain ATCC 700860

Query: 6 WKNLY 10
WKNLY
Sbjct: 157 WKNLY 161


>sp|FLAB1_THEKO|FLAGELLIN B1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 6 WKNLY 10
WKNLY
Sbjct: 163 WKNLY 167


>sp|YPV8_METTF|UNCHARACTERIZED protein ORF8|Methanothermobacter thermautotrophicus

Query: 1 TLKIPWKNL 9
TLK+P++N+
Sbjct: 100 TLKLPYRNI 108


>sp|GLKA_THESM|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus sibiricus (strain DSM

Query: 6 WKNLY 10
WKNLY
Sbjct: 12 WKNLY 16


>sp|YPZ8_METTF|UNCHARACTERIZED protein ORF8'|Methanothermobacter thermautotrophicus

Query: 1 TLKIPWKNL 9
TLK+P++N+
Sbjct: 100 TLKLPYRNI 108


>sp|FEN_THEAC|FLAP endonuclease 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 KIPWKNLY 10
K+P KN+Y
Sbjct: 193 KVPRKNIY 200


>sp|SYE_METJA|GLUTAMATE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LKIPWKNLY 10
+K W+NLY
Sbjct: 377 VKFSWENLY 385


>sp|FEN_METAR|FLAP endonuclease 1|Methanocella arvoryzae (strain DSM 22066

Query: 3 KIPWKNLY 10
K+P KN+Y
Sbjct: 194 KVPRKNIY 201


>sp|SYE_METHJ|GLUTAMATE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LKIPWKNLY 10
++ W+NLY
Sbjct: 387 IQFSWENLY 395


>sp|SYE_METM6|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 LKIPWKNLY 10
++ W+NLY
Sbjct: 379 VRFAWENLY 387


>sp|FEN_METBU|FLAP endonuclease 1|Methanococcoides burtonii (strain DSM 6242

Query: 3 KIPWKNLY 10
K+P KN+Y
Sbjct: 195 KLPKKNIY 202


>sp|FEN_THEVO|FLAP endonuclease 1|Thermoplasma volcanium (strain ATCC 51530

Query: 3 KIPWKNLY 10
K+P KN+Y
Sbjct: 193 KVPRKNVY 200


>sp|SYE_METM5|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 LKIPWKNLY 10
++ W+NLY
Sbjct: 379 VRFAWENLY 387


>sp|SYE_METM7|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 LKIPWKNLY 10
++ W+NLY
Sbjct: 379 VRFAWENLY 387


>sp|FEN_METTP|FLAP endonuclease 1|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 KIPWKNLY 10
K+P KN+Y
Sbjct: 193 KMPRKNIY 200


>sp|FEN_METMA|FLAP endonuclease 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 KIPWKNLY 10
K+P KN+Y
Sbjct: 195 KLPGKNVY 202


>sp|FEN_METAC|FLAP endonuclease 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 KIPWKNLY 10
K+P KN+Y
Sbjct: 195 KLPGKNVY 202


>sp|FEN_ARCFU|FLAP endonuclease 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KIPWKNLY 10
K+P KN+Y
Sbjct: 194 KLPGKNVY 201


>sp|SYE_METMP|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LKIPWKNLY 10
++ W+NLY
Sbjct: 379 VRFAWENLY 387


>sp|YD5A_METJA|UNCHARACTERIZED protein MJ1351.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KIPWKNLY 10
+IPW+ Y
Sbjct: 98 QIPWRYFY 105


>sp|Y1496_PYRFU|UPF0252 protein PF1496|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TLKIPWK 7
T KIPW+
Sbjct: 50 TTKIPWR 56


>sp|SYE_METMJ|GLUTAMATE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LKIPWKNLY 10
+ W+NLY
Sbjct: 387 ISFSWENLY 395


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 TLKIPWKNLY 10
TLK+ KN+Y
Sbjct: 596 TLKVAKKNVY 605


>sp|FEN_PYRFU|FLAP endonuclease 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KIPWKNLY 10
K+P KN+Y
Sbjct: 195 KLPGKNVY 202


>sp|DPCKG_METKA|GTP-DEPENDENT dephospho-CoA kinase|Methanopyrus kandleri (strain AV19 /

Query: 2 LKIPWKNLY 10
L+ PW LY
Sbjct: 15 LRRPWGTLY 23


>sp|FEN_THEKO|FLAP endonuclease 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 KIPWKNLY 10
K+P KN+Y
Sbjct: 195 KLPGKNVY 202


>sp|FEN_NANEQ|FLAP endonuclease 1|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 KIPWKNLY 10
K+P KN+Y
Sbjct: 196 KLPGKNIY 203


>sp|FEN_THEGJ|FLAP endonuclease 1|Thermococcus gammatolerans (strain DSM 15229

Query: 3 KIPWKNLY 10
K+P KN+Y
Sbjct: 195 KLPGKNVY 202


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 1 TLKIPWKNL 9
TLK WK +
Sbjct: 449 TLKTEWKEI 457


>sp|FEN_THEON|FLAP endonuclease 1|Thermococcus onnurineus (strain NA1)

Query: 3 KIPWKNLY 10
K+P KN+Y
Sbjct: 195 KLPGKNVY 202


>sp|Y1057_METJA|UNCHARACTERIZED glycosyltransferase MJ1057|Methanocaldococcus jannaschii (strain

Query: 1 TLKIPWKN 8
TLK WKN
Sbjct: 233 TLKTHWKN 240


>sp|FEN_STAMF|FLAP endonuclease 1|Staphylothermus marinus (strain ATCC 43588

Query: 3 KIPWKNLY 10
K+P KN+Y
Sbjct: 199 KLPRKNVY 206




15|Sequence|71|80|WKNLYGEAVV

>sp|DTDA_METM5|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain C5 /

Query: 1 WKNLYGE 7
WK LYGE
Sbjct: 229 WKGLYGE 235


>sp|DTDA_METVS|D-AMINOACYL-TRNA deacylase|Methanococcus vannielii (strain ATCC 35089

Query: 1 WKNLYGE 7
WK LYGE
Sbjct: 229 WKGLYGE 235


>sp|DTDA_METMP|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain DSM 14266

Query: 1 WKNLYGE 7
WK LYGE
Sbjct: 229 WKGLYGE 235


>sp|DTDA_METM7|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain C7 /

Query: 1 WKNLYGE 7
WK LYGE
Sbjct: 229 WKGLYGE 235


>sp|HYD1D_PYRFU|SULFHYDROGENASE 1 subunit delta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WKNLYGEAVV 10
WK +YG+A V
Sbjct: 104 WKKVYGDAKV 113


>sp|Y942_METJA|PROBABLE ATP-dependent helicase MJ0942|Methanocaldococcus jannaschii (strain

Query: 2 KNLYGEAVV 10
K LYG AVV
Sbjct: 381 KELYGNAVV 389


>sp|SYE_METB6|GLUTAMATE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 WKNLYGE 7
W NLY E
Sbjct: 393 WDNLYAE 399


>sp|RNZ_METJA|RIBONUCLEASE Z|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KNLYGEAV 9
KN+YGE +
Sbjct: 186 KNIYGEII 193


>sp|SYE_METHJ|GLUTAMATE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 WKNLYGE 7
W+NLY +
Sbjct: 391 WENLYAK 397


>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 4 LYGEAV 9
LYGEAV
Sbjct: 336 LYGEAV 341


>sp|Y1464_METJA|UNCHARACTERIZED GTP-binding protein MJ1464|Methanocaldococcus jannaschii (strain

Query: 1 WKNLYGEAVV 10
WK ++GE V
Sbjct: 73 WKEVFGENTV 82


>sp|SYE_METTM|GLUTAMATE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 WKNLYG 6
WK +YG
Sbjct: 385 WKKIYG 390


>sp|PRNK_METJA|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase MJ1315|Methanocaldococcus jannaschii (strain

Query: 1 WKNLYG 6
WK LYG
Sbjct: 253 WKILYG 258


>sp|NADM_METB6|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanoregula boonei (strain DSM 21154

Query: 1 WKNLYGEAVV 10
W+NL AVV
Sbjct: 140 WENLVPPAVV 149


>sp|SYE_METTH|GLUTAMATE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 WKNLYG 6
WK +YG
Sbjct: 386 WKKIYG 391


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 WKNLYG 6
WK +YG
Sbjct: 387 WKKIYG 392


>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 WKNLYG 6
WK +YG
Sbjct: 386 WKKIYG 391


>sp|DHYS_THEVO|PROBABLE deoxyhypusine synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 NLYGEAVV 10
N+YG+A V
Sbjct: 293 NIYGDATV 300


>sp|GATA_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Sulfolobus acidocaldarius (strain ATCC

Query: 1 WKNLYGE 7
WK+ YG+
Sbjct: 330 WKDTYGK 336


>sp|SYT_METJA|THREONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WKNLYGEAVV 10
+KN YG+ V+
Sbjct: 397 YKNKYGKDVI 406


>sp|RS172_METAC|SMALL ribosomal subunit protein uS17B|Methanosarcina acetivorans (strain

Query: 3 NLYGEAV 9
N YGEA+
Sbjct: 226 NAYGEAI 232


>sp|DHYS_THEAC|PROBABLE deoxyhypusine synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 NLYGEAVV 10
N+YG+A V
Sbjct: 293 NVYGDATV 300




16|Sequence|76|85|GEAVVATLEG

>sp|RF1_PYRAE|PEPTIDE chain release factor subunit|Pyrobaculum aerophilum (strain ATCC

Query: 1 GEAVVATLEG 10
GEAV+A L+G
Sbjct: 156 GEAVIALLKG 165


>sp|RF1_METTH|PEPTIDE chain release factor subunit|Methanothermobacter thermautotrophicus

Query: 2 EAVVATLEG 10
EA +ATL+G
Sbjct: 151 EATIATLKG 159




17|Sequence|81|90|ATLEGLYLLV

>sp|G1PDH_METTH|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothermobacter thermautotrophicus

Query: 1 ATLEGLYLL 9
ATLEGL+ +
Sbjct: 104 ATLEGLHFI 112


>sp|RS2_NITMS|SMALL ribosomal subunit protein uS2|Nitrosopumilus maritimus (strain

Query: 1 ATLEGLYLL 9
A+ EGLY+L
Sbjct: 37 ASPEGLYML 45


>sp|Y907_METJA|UNCHARACTERIZED protein MJ0907|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TLEGLYLL 9
TL+G+Y+L
Sbjct: 136 TLKGMYIL 143


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 LEGLYLL 9
LEG+YL+
Sbjct: 329 LEGMYLI 335




18|Sequence|86|95|LYLLVVPGAS

>sp|DPHB_HALMA|DIPHTHINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LYLLVVPGA 9
L+LLV+PG+
Sbjct: 233 LHLLVIPGS 241


>sp|DPHB_HALSA|DIPHTHINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LYLLVVPGA 9
L+LLVVPG+
Sbjct: 232 LHLLVVPGS 240


>sp|DPHB_HALS3|DIPHTHINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LYLLVVPGA 9
L+LLVVPG+
Sbjct: 232 LHLLVVPGS 240


>sp|MCH_METKA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanopyrus kandleri (strain AV19 /

Query: 1 LYLLVVPGAS 10
LYLLV P AS
Sbjct: 164 LYLLVAPTAS 173


>sp|DPHB_HALLT|DIPHTHINE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 LYLLVVPG 8
L+LLV+PG
Sbjct: 235 LHLLVIPG 242


>sp|DPHB_NATPD|DIPHTHINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LYLLVVPG 8
L+LL+VPG
Sbjct: 234 LHLLIVPG 241


>sp|DPHB_METAC|DIPHTHINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LYLLVVPG 8
L++LVVPG
Sbjct: 234 LHILVVPG 241


>sp|RPA_METTH|REPLICATION factor A|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 YLLVVPG 8
YLL++PG
Sbjct: 705 YLLMIPG 711


>sp|DPHB_METMA|DIPHTHINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LYLLVVPG 8
L++LVVPG
Sbjct: 234 LHILVVPG 241


>sp|MCH_METJA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LYLLVVPGAS 10
+YLLV P AS
Sbjct: 166 VYLLVAPTAS 175


>sp|DPHB_HALWD|DIPHTHINE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LYLLVVPG 8
L+LLV+PG
Sbjct: 226 LHLLVLPG 233


>sp|DPHB_METBF|DIPHTHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LYLLVVPG 8
L++LV+PG
Sbjct: 234 LHILVIPG 241


>sp|MCH_METMP|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LYLLVVPGAS 10
+YLLV P AS
Sbjct: 166 VYLLVAPTAS 175


>sp|MCH_METVS|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LYLLVVPGAS 10
+YLLV P AS
Sbjct: 166 VYLLVAPTAS 175


>sp|MCH_METM5|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C5 /

Query: 1 LYLLVVPGAS 10
+YLLV P AS
Sbjct: 166 VYLLVAPTAS 175


>sp|MCH_METM7|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C7 /

Query: 1 LYLLVVPGAS 10
+YLLV P AS
Sbjct: 166 VYLLVAPTAS 175


>sp|HYD1A_PYRFU|SULFHYDROGENASE 1 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LYLLVVP 7
LYLLV+P
Sbjct: 112 LYLLVLP 118


>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 1 LYLLVVPGAS 10
+YL ++PG +
Sbjct: 205 IYLQIIPGTN 214


>sp|RPO11_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo11|Sulfurisphaera tokodaii (strain DSM

Query: 2 YLLVVPG 8
YLL VPG
Sbjct: 31 YLLKVPG 37


>sp|MCH_METS3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LYLLVVPGAS 10
+YLLV P +S
Sbjct: 167 VYLLVAPTSS 176


>sp|DPHB_METB6|DIPHTHINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 LYLLVVPG 8
L++L+VPG
Sbjct: 226 LHILIVPG 233


>sp|AMPD_METTH|ANHYDROMEVALONATE phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 3 LLVVPGA 9
+L+VPGA
Sbjct: 378 ILIVPGA 384


>sp|MCH_META3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LYLLVVPGAS 10
+YLLV P +S
Sbjct: 166 VYLLVAPTSS 175


>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YLLVVPG 8
YLL +PG
Sbjct: 260 YLLTIPG 266




19|Sequence|91|100|VPGASIKYDA

>sp|AATC_THEGJ|A-TYPE ATP synthase subunit C|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VPGASIKYD 9
+PG S+K D
Sbjct: 255 IPGGSVKLD 263


>sp|PINA_SACI5|HOLLIDAY junction branch migration ATPase|Saccharolobus islandicus (strain

Query: 1 VPGASIKYD 9
+P A++KY+
Sbjct: 456 IPNATVKYE 464


>sp|CSM5_METJA|CRISPR system Cms protein Csm5|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VPGASIK 7
+PG+SIK
Sbjct: 157 IPGSSIK 163


>sp|CSM3_METTH|CRISPR system Cms endoribonuclease Csm3|Methanothermobacter

Query: 1 VPGASIK 7
+PG+SIK
Sbjct: 48 IPGSSIK 54


>sp|SYFB_METAR|PHENYLALANINE--TRNA ligase beta subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 VPGASIKY 8
VPG S+K+
Sbjct: 155 VPGDSVKF 162


>sp|RADB_METST|DNA repair and recombination protein|Methanosphaera stadtmanae (strain

Query: 2 PGASIKYD 9
PG SIK++
Sbjct: 218 PGQSIKFE 225


>sp|GGPS_SULAC|GERANYLGERANYL diphosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VPGASIKY 8
+PG ++KY
Sbjct: 313 IPGKALKY 320


>sp|SPCS_METJA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PGASIKY 8
PGAS+ Y
Sbjct: 105 PGASVMY 111


>sp|SPCS_METKA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanopyrus kandleri (strain AV19 /

Query: 2 PGASIKY 8
PGASI Y
Sbjct: 101 PGASIMY 107




20|Sequence|96|105|IKYDAVKEEK

>sp|METK_ARCFU|S-ADENOSYLMETHIONINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KYDAVKEE 9
+YDA+KEE
Sbjct: 225 EYDAIKEE 232


>sp|SYK_METJA|LYSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IKYDAVKEE 9
IKYD+ KEE
Sbjct: 182 IKYDSEKEE 190


>sp|CH60_METVS|CHAPERONIN GroEL|Methanococcus vannielii (strain ATCC 35089

Query: 1 IKYDAVKEE 9
I +DA KEE
Sbjct: 473 IGFDAAKEE 481


>sp|FOLD_METTP|BIFUNCTIONAL protein FolD|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 IKYDAVKEE 9
+ +DAVKE+
Sbjct: 236 VDFDAVKEK 244


>sp|Y1593_METB6|UPF0200 protein Mboo_1593|Methanoregula boonei (strain DSM 21154

Query: 4 DAVKEEK 10
DAVKE+K
Sbjct: 73 DAVKEQK 79


>sp|KHSE_SACI7|HOMOSERINE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 IKYDAV 6
IKYDAV
Sbjct: 250 IKYDAV 255


>sp|KHSE_SACI6|HOMOSERINE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IKYDAV 6
IKYDAV
Sbjct: 250 IKYDAV 255


>sp|KHSE_SACI4|HOMOSERINE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IKYDAV 6
IKYDAV
Sbjct: 250 IKYDAV 255


>sp|KHSE_SACI3|HOMOSERINE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 IKYDAV 6
IKYDAV
Sbjct: 250 IKYDAV 255


>sp|KHSE_SACI2|HOMOSERINE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 IKYDAV 6
IKYDAV
Sbjct: 250 IKYDAV 255


>sp|KHSE_SACI1|HOMOSERINE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 IKYDAV 6
IKYDAV
Sbjct: 250 IKYDAV 255


>sp|RASEA_THEKO|ARCHAEOSINE synthase subunit beta|Thermococcus kodakarensis (strain ATCC

Query: 1 IKYDAVKE 8
++Y+AVKE
Sbjct: 119 VRYEAVKE 126




21|Sequence|101|110|VKEEKSLQDV

***** No hits found ******


22|Sequence|106|115|SLQDVKQKEL

>sp|FLAK_METVO|PREFLAGELLIN peptidase|Methanococcus voltae

Query: 1 SLQDVKQKEL 10
S+QD+K +E+
Sbjct: 15 SIQDIKSREI 24


>sp|HEM1_METVS|GLUTAMYL-TRNA reductase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LQDVKQKEL 10
++DV++KEL
Sbjct: 320 IEDVRKKEL 328




23|Sequence|111|120|KQKELSRIEE

>sp|NRPR2_METMA|GLOBAL nitrogen regulator NrpRII|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 KELSRIEE 10
KE+SRIE+
Sbjct: 243 KEMSRIED 250


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 2 QKELSRIEE 10
+K LSRIEE
Sbjct: 498 EKTLSRIEE 506


>sp|SYS_SULAC|SERINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KQKELSRIEE 10
K+KEL +IEE
Sbjct: 86 KEKELQKIEE 95


>sp|RAD50_PYRFU|DNA double-strand break repair Rad50|Pyrococcus furiosus (strain ATCC

Query: 2 QKELSRIEE 10
+KEL+R+EE
Sbjct: 319 EKELTRVEE 327


>sp|Y1289_METJA|UNCHARACTERIZED protein MJ1289|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KQKELSRIE 9
K+KE +RIE
Sbjct: 38 KEKEKNRIE 46


>sp|RS4_METHJ|SMALL ribosomal subunit protein uS4|Methanospirillum hungatei JF-1

Query: 4 ELSRIEE 10
ELSRIEE
Sbjct: 19 ELSRIEE 25


>sp|Y069_ARCFU|UNCHARACTERIZED protein AF_0069|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KQKELSRIEE 10
K KELSR+ E
Sbjct: 67 KGKELSRLSE 76




24|Sequence|116|125|SRIEEALQKA

>sp|FPRA_METTM|COENZYME F420H(2) oxidase|Methanothermobacter marburgensis (strain ATCC

Query: 1 SRIEEALQK 9
+R+E+ALQ+
Sbjct: 62 ARVEDALQQ 70


>sp|HTR8_HALS3|TRANSDUCER protein Htr8|Halobacterium salinarum (strain ATCC 29341

Query: 2 RIEEALQKA 10
R+EEA QKA
Sbjct: 219 RLEEARQKA 227


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 4 EEALQKA 10
EEALQKA
Sbjct: 391 EEALQKA 397


>sp|AATE_THEPD|A-TYPE ATP synthase subunit E|Thermofilum pendens (strain DSM 2475

Query: 3 IEEALQKA 10
+EEA+QKA
Sbjct: 41 VEEAIQKA 48


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 4 EEALQKA 10
EEALQKA
Sbjct: 388 EEALQKA 394


>sp|SYT_METHJ|THREONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 IEEALQKA 10
IEE+L+KA
Sbjct: 98 IEESLEKA 105


>sp|CARB1_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 4 EEALQKA 10
EEALQKA
Sbjct: 387 EEALQKA 393


>sp|NADK_ARCFU|NAD kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RIEEALQK 9
RIEEAL++
Sbjct: 15 RIEEALKR 22




25|Sequence|121|130|ALQKAAEKGT

>sp|CBID_METVS|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LQKAAEKG 9
L+KA EKG
Sbjct: 245 LEKAGEKG 252


>sp|TF2B_METTL|TRANSCRIPTION initiation factor IIB|Methanothermococcus thermolithotrophicus

Query: 2 LQKAAEKG 9
LQKA EKG
Sbjct: 273 LQKANEKG 280


>sp|AMPD_METTH|ANHYDROMEVALONATE phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 2 LQKAAEKG 9
LQKA E+G
Sbjct: 161 LQKAEERG 168


>sp|TF2B_METM5|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C5 /

Query: 2 LQKAAEKG 9
LQKA EKG
Sbjct: 273 LQKAGEKG 280


>sp|TF2B_METM7|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C7 /

Query: 2 LQKAAEKG 9
LQKA EKG
Sbjct: 273 LQKAGEKG 280


>sp|TF2B_METM6|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C6 /

Query: 2 LQKAAEKG 9
LQKA EKG
Sbjct: 273 LQKAGEKG 280


>sp|AMPD_METMA|ANHYDROMEVALONATE phosphate decarboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 QKAAEKG 9
+KAAEKG
Sbjct: 163 KKAAEKG 169


>sp|FEN_SULTO|FLAP endonuclease 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ALQKAAEKG 9
+L+KA EKG
Sbjct: 261 SLEKAIEKG 269


>sp|AMPPA_METB6|AMP phosphorylase|Methanoregula boonei (strain DSM 21154

Query: 2 LQKAAEKG 9
LQKA E+G
Sbjct: 479 LQKAVEEG 486




26|Sequence|126|135|AEKGTHSGEF

>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 AEKGTHSGEF 10
AEKG + GE+
Sbjct: 922 AEKGVYEGEY 931


>sp|Y1965_THEON|PROTEIN TON_1965|Thermococcus onnurineus (strain NA1)

Query: 2 EKGTHSG 8
EKG HSG
Sbjct: 137 EKGIHSG 143


>sp|RL22_METMP|LARGE ribosomal subunit protein uL22|Methanococcus maripaludis (strain

Query: 4 GTHSGEF 10
GTHSG F
Sbjct: 76 GTHSGRF 82


>sp|RL22_METM7|LARGE ribosomal subunit protein uL22|Methanococcus maripaludis (strain

Query: 4 GTHSGEF 10
GTHSG F
Sbjct: 76 GTHSGRF 82


>sp|RL22_METM6|LARGE ribosomal subunit protein uL22|Methanococcus maripaludis (strain

Query: 4 GTHSGEF 10
GTHSG F
Sbjct: 76 GTHSGRF 82


>sp|RL22_METM5|LARGE ribosomal subunit protein uL22|Methanococcus maripaludis (strain

Query: 4 GTHSGEF 10
GTHSG F
Sbjct: 76 GTHSGRF 82


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 AEKGTHSGEF 10
A GTH+G F
Sbjct: 933 AASGTHTGRF 942


>sp|RS4E_ARCFU|SMALL ribosomal subunit protein eS4|Archaeoglobus fulgidus (strain ATCC

Query: 4 GTHSGE 9
GTH+GE
Sbjct: 179 GTHAGE 184


>sp|AGLB3_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 THSGEF 10
TH+GEF
Sbjct: 367 THNGEF 372


>sp|RL22_METVS|LARGE ribosomal subunit protein uL22|Methanococcus vannielii (strain

Query: 4 GTHSGEF 10
GTH+G F
Sbjct: 76 GTHAGRF 82


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 2 EKGTHSGE 9
E G HSG+
Sbjct: 768 EAGVHSGD 775


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 2 EKGTHSGE 9
E G HSG+
Sbjct: 768 EAGVHSGD 775


>sp|CYDE_METJA|L-CYSTEINE desulfidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KGTHSGE 9
KG+HSG+
Sbjct: 136 KGSHSGK 142


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 2 EKGTHSGE 9
E G HSG+
Sbjct: 766 EAGVHSGD 773


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 2 EKGTHSGE 9
E G HSG+
Sbjct: 769 EAGVHSGD 776


>sp|CARB2_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 2 EKGTHSGE 9
E G HSG+
Sbjct: 313 EAGVHSGD 320


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 2 EKGTHSGE 9
E G HSG+
Sbjct: 766 EAGVHSGD 773


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 EKGTHSGE 9
EKGT GE
Sbjct: 497 EKGTFDGE 504


>sp|CARB_METBA|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri

Query: 2 EKGTHSGE 9
E G HSG+
Sbjct: 101 EAGVHSGD 108


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 2 EKGTHSGE 9
E G HSG+
Sbjct: 778 EAGVHSGD 785


>sp|THIC1_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 KGTHSGE 9
KG H+GE
Sbjct: 360 KGIHNGE 366


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 2 EKGTHSGE 9
E G HSG+
Sbjct: 785 EAGVHSGD 792


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 EKGTHSGE 9
E G HSG+
Sbjct: 777 EAGVHSGD 784


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 EKGTHSGE 9
E G HSG+
Sbjct: 777 EAGVHSGD 784


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 EKGTHSGE 9
E G HSG+
Sbjct: 777 EAGVHSGD 784


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 2 EKGTHSGE 9
E G HSG+
Sbjct: 768 EAGVHSGD 775


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 2 EKGTHSGE 9
E G HSG+
Sbjct: 777 EAGVHSGD 784


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 EKGTHSGE 9
E G HSG+
Sbjct: 777 EAGVHSGD 784


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 EKGTHSGE 9
E G HSG+
Sbjct: 777 EAGVHSGD 784


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 EKGTHSGE 9
E G HSG+
Sbjct: 777 EAGVHSGD 784


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 2 EKGTHSGE 9
E G HSG+
Sbjct: 778 EAGVHSGD 785


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 2 EKGTHSGE 9
E G HSG+
Sbjct: 777 EAGVHSGD 784


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 2 EKGTHSGE 9
E G HSG+
Sbjct: 777 EAGVHSGD 784


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 2 EKGTHSGE 9
E G HSG+
Sbjct: 778 EAGVHSGD 785




27|Sequence|131|140|HSGEFIYGLE

>sp|FRHB_METJA|COENZYME F420 hydrogenase subunit beta|Methanocaldococcus jannaschii

Query: 2 SGEFIYGLE 10
S FIYGLE
Sbjct: 36 STAFIYGLE 44


>sp|G6PI_NATPD|PROBABLE glucose-6-phosphate isomerase|Natronomonas pharaonis (strain ATCC

Query: 3 GEFIYGLE 10
GE +YG+E
Sbjct: 370 GELLYGME 377


>sp|XACG_HALVD|XYLOSE/ARABINOSE-BINDING protein XacG|Haloferax volcanii (strain ATCC 29605

Query: 1 HSGEFIYGL 9
H G ++YG+
Sbjct: 311 HQGNWVYGM 319


>sp|CRUF_HALJT|BISANHYDROBACTERIORUBERIN hydratase|Haloarcula japonica (strain ATCC 49778

Query: 3 GEFIYGLE 10
GEF YG++
Sbjct: 116 GEFTYGVD 123


>sp|CYAS_METTP|CYSTEATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 SGEFIYGLE 10
SGE IYG++
Sbjct: 318 SGERIYGID 326


>sp|FER_SULAC|ZINC-CONTAINING ferredoxin|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 HSGEFIYG 8
HSG IYG
Sbjct: 16 HSGHKIYG 23


>sp|DNLI_THEON|DNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 HSGEFI 6
HSGEF+
Sbjct: 460 HSGEFV 465


>sp|FER1_SULTO|ZINC-CONTAINING ferredoxin-1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HSGEFIYG 8
HSG +YG
Sbjct: 17 HSGHKVYG 24


>sp|TET_PYRHO|TETRAHEDRAL aminopeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GEFIYGL 9
G+FIYG+
Sbjct: 110 GKFIYGV 116


>sp|DNLI_THEKO|DNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HSGEFI 6
HSGEF+
Sbjct: 457 HSGEFL 462


>sp|RL5_METB6|LARGE ribosomal subunit protein uL5|Methanoregula boonei (strain DSM

Query: 2 SGEFIYGLE 10
SG F +G+E
Sbjct: 91 SGNFSFGIE 99


>sp|KAE1B_METST|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 HSGEFIYG 8
H GE I+G
Sbjct: 447 HEGEIIHG 454


>sp|RF1_METMA|PEPTIDE chain release factor subunit|Methanosarcina mazei (strain ATCC

Query: 1 HSGEFIY 7
H+GEF++
Sbjct: 232 HAGEFLH 238


>sp|GCST_THEON|PROBABLE aminomethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 1 HSGEFIY 7
H GEFI+
Sbjct: 51 HMGEFIF 57


>sp|LYSY_THEKO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 4 EFIYGL 9
EF+YGL
Sbjct: 118 EFVYGL 123


>sp|RS19_NATPD|SMALL ribosomal subunit protein uS19|Natronomonas pharaonis (strain

Query: 1 HSGEFIY 7
H GEF Y
Sbjct: 9 HEGEFTY 15


>sp|GCST_THEKO|PROBABLE aminomethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 HSGEFIY 7
H GEFI+
Sbjct: 51 HMGEFIF 57


>sp|HIS5_ARCFU|IMIDAZOLE glycerol phosphate synthase subunit|Archaeoglobus fulgidus (strain

Query: 1 HSGEFIY 7
SGEF+Y
Sbjct: 131 ESGEFVY 137


>sp|GCST_THEGJ|PROBABLE aminomethyltransferase|Thermococcus gammatolerans (strain DSM

Query: 1 HSGEFIY 7
H GEFI+
Sbjct: 51 HMGEFIF 57




28|Sequence|136|145|IYGLENFVYK

>sp|GLMU_METVS|BIFUNCTIONAL protein GlmU|Methanococcus vannielii (strain ATCC 35089

Query: 1 IYGLENFVYK 10
IY LENFV++
Sbjct: 165 IYKLENFVFE 174


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 YGLENFVY 9
YGLE FV+
Sbjct: 243 YGLERFVW 250


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 YGLENFVY 9
YGLE FV+
Sbjct: 243 YGLERFVW 250


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 YGLENFVY 9
YGLE FV+
Sbjct: 244 YGLERFVW 251


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 YGLENFVY 9
YGLE FV+
Sbjct: 243 YGLERFVW 250


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 YGLENFVY 9
YGLE FV+
Sbjct: 243 YGLERFVW 250


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YGLENFVY 9
YGLE FV+
Sbjct: 245 YGLERFVW 252


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 YGLENFVYK 10
+G+ENF+ K
Sbjct: 111 FGVENFIEK 119


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 YGLENFVYK 10
+G+ENF+ K
Sbjct: 111 FGVENFIEK 119


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 YGLENFVYK 10
+G+ENF+ K
Sbjct: 111 FGVENFIEK 119


>sp|FRHB_METTH|COENZYME F420 hydrogenase subunit beta|Methanothermobacter

Query: 1 IYGLENFVY 9
IY +ENF Y
Sbjct: 132 IYCMENFPY 140


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 YGLENFVY 9
YGLE FV+
Sbjct: 238 YGLERFVW 245


>sp|DOXD_ACIAM|THIOSULFATE dehydrogenase [quinone] large subunit|Acidianus ambivalens

Query: 1 IYGLENFVYK 10
++GL+ F+YK
Sbjct: 156 VWGLDYFLYK 165


>sp|SYFB_METMJ|PHENYLALANINE--TRNA ligase beta subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 YGLENF 7
YG+ENF
Sbjct: 335 YGIENF 340


>sp|TRPA_METBF|TRYPTOPHAN synthase alpha chain|Methanosarcina barkeri (strain Fusaro /

Query: 2 YGLENFVYK 10
YG+E FV K
Sbjct: 108 YGVEKFVEK 116


>sp|AROC_SULTO|CHORISMATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YGLENFVYK 10
YG EN+ Y+
Sbjct: 114 YGFENWDYR 122


>sp|FRHB_METBF|COENZYME F420 hydrogenase subunit beta|Methanosarcina barkeri (strain Fusaro

Query: 1 IYGLENFVYK 10
++ +ENF YK
Sbjct: 136 LFCMENFPYK 145


>sp|IF2P_METS5|PROBABLE translation initiation factor IF-2|Metallosphaera sedula (strain

Query: 3 GLENFVYK 10
L+N+VYK
Sbjct: 165 ALDNYVYK 172


>sp|ARCH_SACS2|PROTEIN archease|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YGLENFVYK 10
Y LEN +YK
Sbjct: 56 YDLENLLYK 64


>sp|ARCH_SACI7|PROTEIN archease|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 YGLENFVYK 10
Y LEN +YK
Sbjct: 56 YDLENLLYK 64


>sp|ARCH_SACI2|PROTEIN archease|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 YGLENFVYK 10
Y LEN +YK
Sbjct: 56 YDLENLLYK 64


>sp|ARCH_SACI1|PROTEIN archease|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 YGLENFVYK 10
Y LEN +YK
Sbjct: 56 YDLENLLYK 64


>sp|ARCH_SACI6|PROTEIN archease|Saccharolobus islandicus (strain M.16.4 /

Query: 2 YGLENFVYK 10
Y LEN +YK
Sbjct: 56 YDLENLLYK 64


>sp|ARCH_SACI4|PROTEIN archease|Saccharolobus islandicus (strain M.14.25 /

Query: 2 YGLENFVYK 10
Y LEN +YK
Sbjct: 56 YDLENLLYK 64


>sp|ARCH_SACI3|PROTEIN archease|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 YGLENFVYK 10
Y LEN +YK
Sbjct: 56 YDLENLLYK 64


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 YGLENFVY 9
YGLE F +
Sbjct: 244 YGLERFTW 251


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 YGLENFVY 9
YGLE F +
Sbjct: 233 YGLERFAW 240


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YGLENFVY 9
YG+E FV+
Sbjct: 235 YGIERFVW 242


>sp|FRHB_METJA|COENZYME F420 hydrogenase subunit beta|Methanocaldococcus jannaschii

Query: 1 IYGLEN 6
IYGLEN
Sbjct: 40 IYGLEN 45


>sp|SYI_HALWD|ISOLEUCINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 YGLENFV 8
YG+E+F+
Sbjct: 110 YGMESFI 116


>sp|AROC_SULAC|CHORISMATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YGLENFVYK 10
YG EN+ Y+
Sbjct: 114 YGYENWDYR 122


>sp|AROC_SACS2|CHORISMATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YGLENFVYK 10
YG EN+ Y+
Sbjct: 114 YGYENWDYR 122


>sp|AROC_METS5|CHORISMATE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 2 YGLENFVYK 10
YG EN+ Y+
Sbjct: 114 YGYENWDYR 122


>sp|AROC_SACI7|CHORISMATE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 YGLENFVYK 10
YG EN+ Y+
Sbjct: 114 YGYENWDYR 122


>sp|AROC_SACI6|CHORISMATE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 YGLENFVYK 10
YG EN+ Y+
Sbjct: 114 YGYENWDYR 122


>sp|AROC_SACI4|CHORISMATE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 YGLENFVYK 10
YG EN+ Y+
Sbjct: 114 YGYENWDYR 122


>sp|AROC_SACI3|CHORISMATE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 YGLENFVYK 10
YG EN+ Y+
Sbjct: 114 YGYENWDYR 122


>sp|AROC_SACI2|CHORISMATE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 YGLENFVYK 10
YG EN+ Y+
Sbjct: 114 YGYENWDYR 122


>sp|AROC_SACI1|CHORISMATE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 YGLENFVYK 10
YG EN+ Y+
Sbjct: 114 YGYENWDYR 122


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 YGLENFVYK 10
YG+ NF+ K
Sbjct: 111 YGVGNFIEK 119


>sp|NIKR_SACS2|PUTATIVE nickel-responsive regulator|Saccharolobus solfataricus (strain

Query: 1 IYGLENFVY 9
IYG+ N VY
Sbjct: 52 IYGIINLVY 60


>sp|NIKR_SACI7|PUTATIVE nickel-responsive regulator|Saccharolobus islandicus (strain

Query: 1 IYGLENFVY 9
IYG+ N VY
Sbjct: 52 IYGIINLVY 60


>sp|NIKR_SACI6|PUTATIVE nickel-responsive regulator|Saccharolobus islandicus (strain

Query: 1 IYGLENFVY 9
IYG+ N VY
Sbjct: 52 IYGIINLVY 60


>sp|NIKR_SACI4|PUTATIVE nickel-responsive regulator|Saccharolobus islandicus (strain

Query: 1 IYGLENFVY 9
IYG+ N VY
Sbjct: 52 IYGIINLVY 60


>sp|NIKR_SACI3|PUTATIVE nickel-responsive regulator|Saccharolobus islandicus (strain

Query: 1 IYGLENFVY 9
IYG+ N VY
Sbjct: 52 IYGIINLVY 60


>sp|NIKR_SACI2|PUTATIVE nickel-responsive regulator|Saccharolobus islandicus (strain

Query: 1 IYGLENFVY 9
IYG+ N VY
Sbjct: 52 IYGIINLVY 60


>sp|NIKR_SACI1|PUTATIVE nickel-responsive regulator|Saccharolobus islandicus (strain

Query: 1 IYGLENFVY 9
IYG+ N VY
Sbjct: 52 IYGIINLVY 60


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GLENFVYK 10
G+ENF+ K
Sbjct: 114 GVENFIQK 121


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 3 GLENFVYK 10
G NFVYK
Sbjct: 440 GFHNFVYK 447


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 GLENFVYK 10
G+ENF+ K
Sbjct: 114 GVENFIKK 121


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GLENFVYK 10
G+ENF+ K
Sbjct: 114 GVENFIKK 121




29|Sequence|141|150|NFVYKDIKPG

>sp|ENO_METAR|ENOLASE arvoryzae (strain DSM 22066

Query: 1 NFVYKDIK 8
N+VYKD K
Sbjct: 239 NYVYKDTK 246


>sp|Y1481_METJA|UNCHARACTERIZED protein MJ1481|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YKDIKPG 10
YKD KPG
Sbjct: 36 YKDAKPG 42


>sp|PIMT_HYPBU|PROTEIN-L-ISOASPARTATE O-methyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 4 YKDIKPG 10
Y D+KPG
Sbjct: 80 YADLKPG 86


>sp|FEN_METB6|FLAP endonuclease 1|Methanoregula boonei (strain DSM 21154

Query: 1 NFVYKDIKP 9
NF+ K IKP
Sbjct: 68 NFLEKGIKP 76


>sp|IPYR_METTH|INORGANIC pyrophosphatase|Methanothermobacter thermautotrophicus (strain

Query: 3 VYKDIKPG 10
++KDI+PG
Sbjct: 3 LWKDIEPG 10


>sp|ASSY_METS5|ARGININOSUCCINATE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 NFVYKDIK 8
NF KDIK
Sbjct: 68 NFALKDIK 75


>sp|RL24E_META3|LARGE ribosomal subunit protein eL24|Methanococcus aeolicus (strain

Query: 1 NFVYKDIKPG 10
NF K I+PG
Sbjct: 7 NFCGKSIEPG 16


>sp|SYTE_AERPE|THREONINE--TRNA ligase editing subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 FVYKDIKPG 10
F YK +KP
Sbjct: 11 FEYKTVKPA 19


>sp|IDI2_AERPE|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Aeropyrum pernix (strain ATCC 700893

Query: 2 FVYKDIK 8
VYKD+K
Sbjct: 369 LVYKDVK 375


>sp|KHSE_AERPE|HOMOSERINE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 3 VYKDIKPG 10
VYK + PG
Sbjct: 87 VYKGVPPG 94


>sp|CSX1_SACS2|CRISPR system endoribonuclease Csx1|Saccharolobus solfataricus (strain

Query: 1 NFVYKDIK 8
N VYKD+K
Sbjct: 261 NVVYKDMK 268


>sp|TRCM_PYRAB|TRNA (cytosine(49)-C(5))-methyltransferase|Pyrococcus abyssi (strain GE5

Query: 4 YKDIKPG 10
YK +KPG
Sbjct: 225 YKSLKPG 231


>sp|SPSS_METBF|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 FVYKDIK 8
F+YKD+K
Sbjct: 336 FLYKDLK 342


>sp|FEN_METAR|FLAP endonuclease 1|Methanocella arvoryzae (strain DSM 22066

Query: 3 VYKDIKP 9
+Y D+KP
Sbjct: 200 IYMDVKP 206




30|Sequence|146|155|DIKPGRKRKK

>sp|TRPC_METTM|INDOLE-3-GLYCEROL phosphate synthase|Methanothermobacter marburgensis (strain ATCC

Query: 3 KPGRKR 8
KPGRKR
Sbjct: 258 KPGRKR 263


>sp|G1PDH_METHJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanospirillum hungatei JF-1 (strain

Query: 1 DIKPGR 6
DIKPGR
Sbjct: 42 DIKPGR 47


>sp|SYP_METM5|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 DIKPGRK 7
DI+PGRK
Sbjct: 318 DIRPGRK 324


>sp|SYP_METM6|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 DIKPGRK 7
DI+PGRK
Sbjct: 318 DIRPGRK 324


>sp|SYP_METM7|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 DIKPGRK 7
DI+PGRK
Sbjct: 318 DIRPGRK 324


>sp|SYP_METMP|PROLINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DIKPGRK 7
DI+PGRK
Sbjct: 318 DIRPGRK 324


>sp|SYP_METVS|PROLINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 DIKPGRK 7
DI+PGRK
Sbjct: 318 DIRPGRK 324


>sp|SYP_METJA|PROLINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DIKPGRK 7
DI+PGRK
Sbjct: 318 DIRPGRK 324


>sp|TDXH_METTM|PEROXIREDOXIN marburgensis (strain ATCC BAA-927

Query: 1 DIKPGRKRKK 10
DI+ RKRK+
Sbjct: 185 DIETARKRKE 194


>sp|TDXH_METTH|PEROXIREDOXIN thermautotrophicus (strain ATCC 29096

Query: 1 DIKPGRKRK 9
DI+ RKRK
Sbjct: 185 DIETARKRK 193


>sp|SYP_THEKO|PROLINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DIKPGRK 7
DI+PGRK
Sbjct: 328 DIRPGRK 334


>sp|SYFB_METAR|PHENYLALANINE--TRNA ligase beta subunit|Methanocella arvoryzae (strain DSM 22066

Query: 5 GRKRKK 10
GRKRKK
Sbjct: 129 GRKRKK 134


>sp|SYFB_SULTO|PHENYLALANINE--TRNA ligase beta subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IKPGRKRKK 10
I GRKRKK
Sbjct: 122 ITVGRKRKK 130


>sp|SYFB_SULAC|PHENYLALANINE--TRNA ligase beta subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IKPGRKRKK 10
I GRKRKK
Sbjct: 122 ITVGRKRKK 130


>sp|SYP_META3|PROLINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DIKPGRK 7
DI+PG+K
Sbjct: 319 DIRPGKK 325


>sp|SYP_METS3|PROLINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DIKPGRK 7
DI+PG+K
Sbjct: 320 DIRPGKK 326


>sp|RNJL_METJA|RNASE J-like protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DIKPGRK 7
DIKP RK
Sbjct: 186 DIKPARK 192


>sp|SYFB_SACI6|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 5 GRKRKK 10
GRKRKK
Sbjct: 122 GRKRKK 127


>sp|SYFB_SACI4|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 5 GRKRKK 10
GRKRKK
Sbjct: 122 GRKRKK 127


>sp|SYFB_SACI7|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 5 GRKRKK 10
GRKRKK
Sbjct: 122 GRKRKK 127


>sp|SYFB_SACI3|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.16.27)

Query: 5 GRKRKK 10
GRKRKK
Sbjct: 122 GRKRKK 127


>sp|SYFB_SACI2|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 GRKRKK 10
GRKRKK
Sbjct: 122 GRKRKK 127


>sp|SYFB_SACI1|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 5 GRKRKK 10
GRKRKK
Sbjct: 122 GRKRKK 127


>sp|IF2G_NATPD|TRANSLATION initiation factor 2 subunit|Natronomonas pharaonis (strain ATCC

Query: 1 DIKPGRK 7
+IKPGR+
Sbjct: 251 EIKPGRE 257


>sp|SYFB_SACS2|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 GRKRKK 10
GRKRKK
Sbjct: 122 GRKRKK 127




31|Sequence|151|160|RKRKKHKKHF

>sp|Y243_ARCFU|UNCHARACTERIZED protein AF_0243|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RKRKKHKKHF 10
R+ KKH+K F
Sbjct: 389 RRLKKHRKEF 398


>sp|GGGPS_METST|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 KKHKKHF 10
K+HK HF
Sbjct: 12 KEHKLHF 18


>sp|Y1506_METJA|UNCHARACTERIZED protein MJ1506|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RKRKKHKK 8
RKRK+H++
Sbjct: 423 RKRKRHQE 430


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 1 RKRKKHK 7
RKR KHK
Sbjct: 356 RKRLKHK 362




32|Sequence|156|165|HKKHFKKPFK

>sp|ARGD_ARCFU|ACETYLORNITHINE aminotransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HKKHFKKPFK 10
HK+ F+KPF+
Sbjct: 141 HKEKFRKPFE 150


>sp|DPCKG_METMJ|GTP-DEPENDENT dephospho-CoA kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 HKKHFKKPF 9
H+ FKKPF
Sbjct: 8 HRDLFKKPF 16


>sp|PDXS_HALWD|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Haloquadratum walsbyi (strain

Query: 2 KKHFKKPF 9
K+HF PF
Sbjct: 126 KRHFTAPF 133


>sp|DPCKG_METHJ|GTP-DEPENDENT dephospho-CoA kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 HKKHFKKPF 9
H++ FK+PF
Sbjct: 8 HRQLFKEPF 16


>sp|NDK_METMJ|NUCLEOSIDE diphosphate kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 HKKHFKKPF 9
+++H +KPF
Sbjct: 49 YREHLEKPF 57


>sp|RS7_THEON|SMALL ribosomal subunit protein uS7|Thermococcus onnurineus (strain

Query: 1 HKKHFKKPF 9
H +H KKPF
Sbjct: 48 HGRHAKKPF 56


>sp|RS7_THEGJ|SMALL ribosomal subunit protein uS7|Thermococcus gammatolerans (strain

Query: 1 HKKHFKKPF 9
H +H KKPF
Sbjct: 48 HGRHAKKPF 56


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HKKHFKKPF 9
+ +HF KPF
Sbjct: 103 YSEHFLKPF 111


>sp|COXX2_PICTO|PROTOHEME IX farnesyltransferase 2|Picrophilus torridus (strain ATCC 700027

Query: 1 HKKHFKKPF 9
+KK FKK F
Sbjct: 260 NKKDFKKAF 268


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HKKHFKKPF 9
+ +HF KPF
Sbjct: 99 YAEHFLKPF 107


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 FKKPFK 10
FKKPF+
Sbjct: 56 FKKPFE 61


>sp|NDK_METBU|NUCLEOSIDE diphosphate kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 HKKHFKKPF 9
+K+H ++PF
Sbjct: 49 YKEHSERPF 57


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 1 HKKHFKKPF 9
+ +HF KPF
Sbjct: 103 YAEHFLKPF 111


>sp|SYK_METTH|LYSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 KHFKKPF 9
+HF++PF
Sbjct: 123 EHFQRPF 129


>sp|RF1_ARCFU|PEPTIDE chain release factor subunit|Archaeoglobus fulgidus (strain ATCC

Query: 3 KHFKKP 8
KHF+KP
Sbjct: 75 KHFRKP 80


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 KHFKKPF 9
+HF+KPF
Sbjct: 104 EHFQKPF 110


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 HKKHFKKPF 9
+ +HF KPF
Sbjct: 103 YAEHFLKPF 111


>sp|Y1873_ARCFU|UNCHARACTERIZED protein AF_1873|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KKHFKKPFK 10
KK+F+ P K
Sbjct: 292 KKYFRDPLK 300


>sp|Y006_METJA|UNCHARACTERIZED oxidoreductase MJ0006|Methanocaldococcus jannaschii (strain ATCC

Query: 1 HKKHFKKPF 9
H+K KKP
Sbjct: 55 HEKRLKKPL 63




33|Sequence|161|170|KKPFKGLDRS

>sp|SAHH_PYRHO|ADENOSYLHOMOCYSTEINASE horikoshii (strain ATCC 700860

Query: 1 KKPFKGL 7
KKPFKG+
Sbjct: 42 KKPFKGV 48


>sp|SAHH_PYRAB|ADENOSYLHOMOCYSTEINASE abyssi (strain GE5 /

Query: 1 KKPFKGL 7
KKPFKG+
Sbjct: 43 KKPFKGV 49


>sp|SAHH_PYRFU|ADENOSYLHOMOCYSTEINASE furiosus (strain ATCC 43587

Query: 1 KKPFKGL 7
KKPFKG+
Sbjct: 42 KKPFKGV 48


>sp|SAHH_THEVO|ADENOSYLHOMOCYSTEINASE volcanium (strain ATCC 51530

Query: 1 KKPFKGLD 8
+KPFKG++
Sbjct: 30 EKPFKGIN 37


>sp|SIHH_METJA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KKPFKGL 7
+KPFKG+
Sbjct: 37 EKPFKGI 43


>sp|SAHH_THEKO|ADENOSYLHOMOCYSTEINASE kodakarensis (strain ATCC BAA-918

Query: 1 KKPFKGL 7
+KPFKG+
Sbjct: 42 RKPFKGV 48


>sp|SAHH_THEAC|ADENOSYLHOMOCYSTEINASE acidophilum (strain ATCC 25905

Query: 1 KKPFKGL 7
+KPFKG+
Sbjct: 30 EKPFKGI 36


>sp|SIHH_METTH|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 KKPFKGL 7
+KPFKG+
Sbjct: 38 EKPFKGV 44


>sp|RS13_THEPD|SMALL ribosomal subunit protein uS13|Thermofilum pendens (strain DSM

Query: 1 KKPFKGLDR 9
K PF G+DR
Sbjct: 84 KDPFLGVDR 92


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PFKGLDRS 10
PFKGL R+
Sbjct: 516 PFKGLVRA 523


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PFKGLDRS 10
PFKGL R+
Sbjct: 516 PFKGLVRA 523


>sp|FWDF_METJA|POLYFERREDOXIN protein FwdF|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KKPFKG 6
+KPFKG
Sbjct: 262 EKPFKG 267


>sp|CPGS_PYRAB|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 KKPFKGLDRS 10
K PFK L+++
Sbjct: 54 KDPFKALEKA 63




34|Sequence|166|175|GLDRSKDKPK

>sp|PCKG_THEVO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma volcanium (strain ATCC 51530

Query: 3 DRSKDKPK 10
+RSK+KPK
Sbjct: 473 ERSKNKPK 480


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 1 GLDRSKDKPK 10
GLD +D+P+
Sbjct: 154 GLDYDQDRPQ 163


>sp|MUTS_METTP|DNA mismatch repair protein MutS|Methanothrix thermoacetophila (strain

Query: 4 RSKDKPK 10
RSK++PK
Sbjct: 795 RSKERPK 801




35|Sequence|171|180|KDKPKEAKKD

>sp|Y2029_AERPE|UPF0284 protein APE_2029.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 KDKPKEAKK 9
KD P+E KK
Sbjct: 190 KDNPRELKK 198


>sp|Y018_METJA|UNCHARACTERIZED protein MJ0018|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DKPKEAKKD 10
DKP E KK+
Sbjct: 42 DKPLEVKKE 50


>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KDKPKEAKK 9
K+KPKE KK
Sbjct: 70 KNKPKEVKK 78


>sp|SELB_METJA|SELENOCYSTEINE-SPECIFIC elongation factor|Methanocaldococcus jannaschii (strain ATCC

Query: 2 DKPKEAKK 9
DKPKE++K
Sbjct: 39 DKPKESQK 46


>sp|Y948_METJA|UNCHARACTERIZED protein MJ0948|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DKPKEAKKD 10
D PKE K+D
Sbjct: 146 DYPKETKED 154




36|Sequence|176|185|EAKKDTFVEK

>sp|ATGT_THEON|TRNA-GUANINE(15) transglycosylase|Thermococcus onnurineus (strain NA1)

Query: 1 EAKKDTFVE 9
EA KD FVE
Sbjct: 450 EAFKDAFVE 458


>sp|ATGT_THEKO|TRNA-GUANINE(15) transglycosylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EAKKDTFVE 9
EA KD FVE
Sbjct: 450 EAFKDAFVE 458


>sp|IF2A_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 4 KDTFVE 9
KDTFVE
Sbjct: 157 KDTFVE 162


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 EAKKDTFVE 9
E +KD F+E
Sbjct: 214 EGEKDEFIE 222




37|Sequence|181|190|TFVEKLATQV

>sp|AROD_THEAC|3-DEHYDROQUINATE dehydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TFVEKLATQV 10
TFVE+L T+V
Sbjct: 34 TFVERLQTKV 43


>sp|Y337_METJA|UNCHARACTERIZED protein MJ0337|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FVEKLATQV 10
F+EK ATQV
Sbjct: 228 FIEKKATQV 236


>sp|SYT_METBF|THREONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 VEKLATQV 10
+EK+ATQV
Sbjct: 63 IEKVATQV 70


>sp|METK_METBF|S-ADENOSYLMETHIONINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 TFVEKLATQ 9
T+VE++AT+
Sbjct: 234 TYVEEMATR 242




38|Sequence|186|195|LATQVIKNVQ

>sp|GLKA_PYRFU|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 TQVIKNVQ 10
++VIKNVQ
Sbjct: 220 SEVIKNVQ 227


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ATQVIKNV 9
AT++IKNV
Sbjct: 260 ATELIKNV 267


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ATQVIKNV 9
AT++IKNV
Sbjct: 260 ATELIKNV 267


>sp|Y545_METJA|UNCHARACTERIZED protein MJ0545|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ATQVIKNVQ 10
+TQ I+NVQ
Sbjct: 212 STQTIENVQ 220




39|Sequence|191|200|IKNVQVKITD

>sp|PRIS_HALWD|DNA primase small subunit PriS|Haloquadratum walsbyi (strain DSM 16790

Query: 2 KNVQVKITD 10
+++Q++ITD
Sbjct: 338 RDIQIRITD 346


>sp|AROE_SULTO|SHIKIMATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KNVQVKIT 9
KN+++KIT
Sbjct: 163 KNIEIKIT 170


>sp|RL4_THEAC|LARGE ribosomal subunit protein uL4|Thermoplasma acidophilum (strain ATCC

Query: 2 KNVQVKITD 10
KN+ VKI D
Sbjct: 100 KNLYVKIND 108




40|Sequence|196|205|VKITDIHIKY

>sp|METE_THEAC|METHIONINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VKITDIHIKY 10
+ +TD+HI Y
Sbjct: 276 IGVTDVHIDY 285


>sp|LEU1_PYRAE|PROBABLE 2-isopropylmalate synthase|Pyrobaculum aerophilum (strain ATCC

Query: 1 VKITDIHIKY 10
+ +DIH+KY
Sbjct: 99 IATSDIHLKY 108


>sp|LEU1_IGNH4|PROBABLE 2-isopropylmalate synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VKITDIHIKY 10
+ +DIH+KY
Sbjct: 111 IAASDIHLKY 120


>sp|LEU1_SULAC|2-ISOPROPYLMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VKITDIHIKY 10
+ +DIH+KY
Sbjct: 104 IATSDIHLKY 113


>sp|AKSA_METMA|HOMOCITRATE synthase AksA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VKITDIHIKY 10
+ ++D+H+KY
Sbjct: 114 IAMSDMHLKY 123


>sp|CDC6_METB6|ORC1-TYPE DNA replication protein|Methanoregula boonei (strain DSM 21154

Query: 2 KITDIHIK 9
++TD+H+K
Sbjct: 288 QVTDVHVK 295


>sp|LEU1_SULTO|2-ISOPROPYLMALATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VKITDIHIKY 10
+ +DIH+KY
Sbjct: 104 IATSDIHLKY 113


>sp|AKSA_METAC|HOMOCITRATE synthase AksA|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VKITDIHIKY 10
+ ++D+H+KY
Sbjct: 114 IAMSDMHLKY 123


>sp|LEU1_METKA|PROBABLE 2-isopropylmalate synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 VKITDIHIKY 10
+ +DIH++Y
Sbjct: 96 IATSDIHLRY 105


>sp|YLG3_ACIAM|UNCHARACTERIZED protein in lig 3'region|Acidianus ambivalens (Desulfurolobus

Query: 2 KITDIHIKY 10
++TDI IKY
Sbjct: 130 EVTDIAIKY 138


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 TDIHIKY 10
+D+HIK+
Sbjct: 97 SDVHIKF 103


>sp|METE_THEVO|METHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VKITDIHIKY 10
V +TD+HI +
Sbjct: 276 VGVTDVHIDF 285




41|Sequence|201|210|IHIKYEDDVT

>sp|GUAAA_METVS|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus vannielii

Query: 1 IHIKYEDDV 9
IH+KYE+D+
Sbjct: 103 IHVKYENDI 111


>sp|RPO11_AERPE|DNA-DIRECTED RNA polymerase subunit Rpo11|Aeropyrum pernix (strain ATCC 700893

Query: 1 IHIKYEDDV 9
+++KYEDDV
Sbjct: 56 VYVKYEDDV 64


>sp|MDH_METMP|MALATE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IHIKYEDD 8
IHIK EDD
Sbjct: 285 IHIKMEDD 292


>sp|TSR3_HALSA|16S rRNA aminocarboxypropyltransferase|Halobacterium salinarum

Query: 1 IHIKYEDD 8
+H++YE D
Sbjct: 3 LHVRYEGD 10


>sp|TSR3_HALS3|16S rRNA aminocarboxypropyltransferase|Halobacterium salinarum

Query: 1 IHIKYEDD 8
+H++YE D
Sbjct: 3 LHVRYEGD 10


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 KYEDDV 9
KYEDDV
Sbjct: 669 KYEDDV 674


>sp|DCDB_METM5|DCTP deaminase, dUMP-forming|Methanococcus maripaludis (strain C5 /

Query: 3 IKYEDDV 9
IKY+DDV
Sbjct: 41 IKYKDDV 47


>sp|DCDB_METM6|DCTP deaminase, dUMP-forming|Methanococcus maripaludis (strain C6 /

Query: 3 IKYEDDV 9
IKY+DDV
Sbjct: 41 IKYKDDV 47


>sp|PSB_NATPD|PROTEASOME subunit beta|Natronomonas pharaonis (strain ATCC 35678

Query: 4 KYEDDVT 10
+YEDD+T
Sbjct: 185 EYEDDMT 191


>sp|PANB_NATPD|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 HIKYEDDV 9
H YEDD+
Sbjct: 257 HSHYEDDI 264


>sp|SPSS_METM5|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain C5 /

Query: 1 IHIKYEDDV 9
I+ KYED+V
Sbjct: 231 INKKYEDEV 239


>sp|SPSS_METM7|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain C7 /

Query: 1 IHIKYEDDV 9
I+ KYED+V
Sbjct: 231 INKKYEDEV 239




42|Sequence|206|215|EDDVTDPKRP

>sp|Y4661_HALS3|UPF0146 protein OE_4661R|Halobacterium salinarum (strain ATCC 29341

Query: 2 DDVTDPKR 9
DDVTDP+R
Sbjct: 58 DDVTDPER 65


>sp|Y2609_HALSA|UPF0146 protein VNG_2609C|Halobacterium salinarum (strain ATCC 700922

Query: 2 DDVTDPKR 9
DDVTDP+R
Sbjct: 58 DDVTDPER 65


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 1 EDDVTDPKRP 10
E+D+ PK+P
Sbjct: 533 ENDIPKPKKP 542


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 2 DDVTDPKRP 10
D+V +PK P
Sbjct: 664 DNVVEPKSP 672


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EDDVTDPKRP 10
ED + DP RP
Sbjct: 245 EDILIDPDRP 254


>sp|ARGB_METVS|ACETYLGLUTAMATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 2 DDVTDPK 8
DD+ DPK
Sbjct: 218 DDINDPK 224


>sp|MCM_SACS2|MINICHROMOSOME maintenance protein MCM|Saccharolobus solfataricus (strain ATCC

Query: 1 EDDVTDPKRP 10
EDD+ D RP
Sbjct: 218 EDDLVDSARP 227


>sp|MCM_SACI5|MINICHROMOSOME maintenance protein MCM|Saccharolobus islandicus (strain REY15A)

Query: 1 EDDVTDPKRP 10
EDD+ D RP
Sbjct: 218 EDDLVDSARP 227


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 VTDPKRP 10
VTDP RP
Sbjct: 244 VTDPHRP 250


>sp|ASPD_METM7|L-ASPARTATE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 2 DDVTDPK 8
DD+ DPK
Sbjct: 165 DDIMDPK 171


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 DVTDPKRP 10
++TDP RP
Sbjct: 487 NLTDPHRP 494


>sp|MCM_SULAC|MINICHROMOSOME maintenance protein MCM|Sulfolobus acidocaldarius (strain ATCC

Query: 1 EDDVTDPKRP 10
EDD+ D RP
Sbjct: 217 EDDLVDISRP 226


>sp|RS4_CALMQ|SMALL ribosomal subunit protein uS4|Caldivirga maquilingensis (strain

Query: 6 DPKRP 10
DPKRP
Sbjct: 3 DPKRP 7


>sp|LEUC_SULAC|3-ISOPROPYLMALATE dehydratase large subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 EDDVTDPKR 9
E +TDP+R
Sbjct: 405 EGKITDPRR 413


>sp|SRP54_METMA|SIGNAL recognition particle 54 kDa|Methanosarcina mazei (strain ATCC

Query: 1 EDDVTDPK 8
ED++ DPK
Sbjct: 381 EDEMADPK 388


>sp|ENDA_SULAC|TRNA-SPLICING endonuclease|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 DVTDPKRP 10
D+T PK P
Sbjct: 33 DITKPKSP 40


>sp|PORA_PYRAB|PYRUVATE synthase subunit PorA|Pyrococcus abyssi (strain GE5 /

Query: 6 DPKRP 10
DPKRP
Sbjct: 202 DPKRP 206


>sp|RNZ_THEGJ|RIBONUCLEASE Z|Thermococcus gammatolerans (strain DSM 15229

Query: 2 DDVTDPKR 9
+DVT P+R
Sbjct: 190 EDVTGPRR 197


>sp|ACEB_HALVD|MALATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 3 DVTDPKR 9
D+TDP+R
Sbjct: 104 DITDPER 110


>sp|RNZ_THEON|RIBONUCLEASE Z|Thermococcus onnurineus (strain NA1)

Query: 2 DDVTDPKR 9
+DVT P+R
Sbjct: 190 EDVTGPRR 197


>sp|PORA_PYRHO|PYRUVATE synthase subunit PorA|Pyrococcus horikoshii (strain ATCC 700860

Query: 6 DPKRP 10
DPKRP
Sbjct: 202 DPKRP 206


>sp|ASSY_SULTO|ARGININOSUCCINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DDVTDPKR 9
DD++DP +
Sbjct: 184 DDISDPSK 191


>sp|Y405_HALVD|PROBABLE cell surface fusion protein|Haloferax volcanii (strain ATCC 29605

Query: 3 DVTDPKRP 10
DVTDP P
Sbjct: 308 DVTDPANP 315


>sp|RNZ_THEKO|RIBONUCLEASE Z|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DDVTDPKR 9
+DVT P+R
Sbjct: 190 EDVTGPRR 197




43|Sequence|211|220|DPKRPLSFGV

>sp|PORA_PYRAB|PYRUVATE synthase subunit PorA|Pyrococcus abyssi (strain GE5 /

Query: 1 DPKRPLSFG 9
DPKRP++ G
Sbjct: 202 DPKRPITQG 210


>sp|PORA_PYRHO|PYRUVATE synthase subunit PorA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DPKRPLSFG 9
DPKRP++ G
Sbjct: 202 DPKRPITQG 210


>sp|PUR1_PYRHO|AMIDOPHOSPHORIBOSYLTRANSFERASE horikoshii (strain ATCC 700860

Query: 4 RPLSFG 9
RPLSFG
Sbjct: 184 RPLSFG 189


>sp|SECG_HALWD|PREPROTEIN translocase subunit SecG|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DPKRPLSFGV 10
DPK ++FGV
Sbjct: 31 DPKTIVAFGV 40


>sp|Y3524_METJA|UNCHARACTERIZED protein MJECL24|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DPKRPLSFGV 10
DP+ LSFG+
Sbjct: 39 DPQFNLSFGI 48


>sp|PORA_METJA|PYRUVATE synthase subunit PorA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DPKRPLSFG 9
DP RP++ G
Sbjct: 205 DPDRPITQG 213


>sp|PORA_METTH|PYRUVATE synthase subunit PorA|Methanothermobacter thermautotrophicus

Query: 1 DPKRPLSFG 9
DP P+S G
Sbjct: 200 DPDEPMSLG 208


>sp|PORA_METTM|PYRUVATE synthase subunit PorA|Methanothermobacter marburgensis (strain ATCC

Query: 1 DPKRPLSFG 9
DP P+S G
Sbjct: 200 DPDEPMSLG 208


>sp|PORA_PYRFU|PYRUVATE synthase subunit PorA|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DPKRPLSFG 9
DP RP++ G
Sbjct: 202 DPARPITQG 210


>sp|TIAS_THEVO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermoplasma volcanium (strain

Query: 1 DPKRPLSFGV 10
+PK P+ FG+
Sbjct: 221 NPKTPVIFGI 230


>sp|PORA_METBF|PYRUVATE synthase subunit PorA|Methanosarcina barkeri (strain Fusaro /

Query: 1 DPKRPLSFG 9
DP+ P +FG
Sbjct: 208 DPEDPKTFG 216


>sp|EF1B_CENSY|ELONGATION factor 1-beta|Cenarchaeum symbiosum (strain A)

Query: 3 KRPLSFGV 10
K PL+FG+
Sbjct: 41 KEPLAFGL 48


>sp|RS4_NITMS|SMALL ribosomal subunit protein uS4|Nitrosopumilus maritimus (strain

Query: 2 PKRPLSF 8
PKRPL++
Sbjct: 14 PKRPLNY 20


>sp|RPO2N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanococcus vannielii (strain ATCC

Query: 1 DPKRPLSF 8
DPK PL +
Sbjct: 142 DPKDPLGY 149


>sp|EF1B_NITMS|ELONGATION factor 1-beta|Nitrosopumilus maritimus (strain SCM1)

Query: 3 KRPLSFGV 10
K PL+FG+
Sbjct: 41 KEPLAFGL 48


>sp|RL4_AERPE|LARGE ribosomal subunit protein uL4|Aeropyrum pernix (strain ATCC 700893

Query: 1 DPKRPLSFGV 10
DP+ PL+ V
Sbjct: 215 DPRSPLALAV 224


>sp|PUS10_NITMS|TRNA pseudouridine synthase Pus10|Nitrosopumilus maritimus (strain SCM1)

Query: 2 PKRPLSFG 9
PK+PL F
Sbjct: 272 PKKPLKFN 279


>sp|Y353_METJA|UNCHARACTERIZED protein MJ0353|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 RPLSFGV 10
+P+SFGV
Sbjct: 18 KPVSFGV 24


>sp|AATA_METS5|A-TYPE ATP synthase subunit A|Metallosphaera sedula (strain ATCC 51363

Query: 1 DPKRPLSFGV 10
DP +PL GV
Sbjct: 205 DPSQPLLTGV 214




44|Sequence|216|225|LSFGVTLGEL

>sp|Y1316_METTH|UPF0215 protein MTH_1316|Methanothermobacter thermautotrophicus (strain

Query: 1 LSFGVTLGE 9
++ GVTLGE
Sbjct: 191 IASGVTLGE 199


>sp|TRPD_METTH|ANTHRANILATE phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 2 SFGVTLGEL 10
FGV +GEL
Sbjct: 259 DFGVEVGEL 267


>sp|IF6_HALS3|TRANSLATION initiation factor 6|Halobacterium salinarum (strain ATCC 29341

Query: 2 SFGVTLGEL 10
+ GVT+GEL
Sbjct: 83 AAGVTVGEL 91


>sp|Y1007_METMA|UPF0215 protein MM_1007|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LSFGVTLGE 9
++ G+TLGE
Sbjct: 183 IATGITLGE 191




45|Sequence|221|230|TLGELSLLTA

>sp|HMDH_HALVD|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Haloferax volcanii (strain ATCC 29605

Query: 3 GELSLLTA 10
GELSLL+A
Sbjct: 381 GELSLLSA 388


>sp|HMDH_PYRHO|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GELSLLTA 10
GELSLL A
Sbjct: 391 GELSLLAA 398


>sp|HMDH_PYRAB|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus abyssi (strain GE5 /

Query: 3 GELSLLTA 10
GELSLL A
Sbjct: 386 GELSLLAA 393




46|Sequence|226|235|SLLTANEHWT

>sp|SPSS1_METHJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LLTANEHWT 10
LLTA H+T
Sbjct: 104 LLTAYSHYT 112


>sp|RFCL_SULTO|REPLICATION factor C large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LLTANEHW 9
+LTAN+ W
Sbjct: 136 ILTANDPW 143


>sp|RFCL_SULAC|REPLICATION factor C large subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LLTANEHW 9
+LTAN+ W
Sbjct: 136 ILTANDPW 143


>sp|BPSA_METJA|N(4)-BIS(AMINOPROPYL)SPERMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SLLTANEHW 9
++LT N+ W
Sbjct: 27 AILTTNDFW 35


>sp|RFCL_THEPD|REPLICATION factor C large subunit|Thermofilum pendens (strain DSM 2475

Query: 2 LLTANEHW 9
+LTAN+ W
Sbjct: 142 VLTANDPW 149




47|Sequence|231|240|NEHWTPCILN

>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 EHWTPCILN 10
EHW P + N
Sbjct: 207 EHWKPNVKN 215


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 EHWTPCILN 10
EHW P + N
Sbjct: 207 EHWKPNVRN 215


>sp|RADB_METJA|DNA repair and recombination protein|Methanocaldococcus jannaschii

Query: 2 EHWTPCIL 9
E+W+ CI+
Sbjct: 168 EYWSKCIV 175


>sp|Y1349_METJA|UNCHARACTERIZED protein MJ1349|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 TPCILN 10
TPC++N
Sbjct: 197 TPCVIN 202


>sp|FDHB2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 1 NEHWTPCI 8
+E+W+ CI
Sbjct: 274 DEYWSRCI 281


>sp|NURA_SACS2|DNA double-strand break repair nuclease|Saccharolobus solfataricus

Query: 1 NEHWTPCILN 10
NE+W ++N
Sbjct: 36 NEYWNEYVIN 45


>sp|SYM_PICTO|METHIONINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 EHWTPCILN 10
E+W P ++N
Sbjct: 208 ENWKPNVIN 216


>sp|T1R2_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 NEHWTPCIL 9
NE+WT ++
Sbjct: 581 NENWTQVVI 589


>sp|RL15_METST|LARGE ribosomal subunit protein uL15|Methanosphaera stadtmanae (strain

Query: 3 HWTPCILN 10
HWT ++N
Sbjct: 43 HWTWMVIN 50




48|Sequence|236|245|PCILNEADKI

>sp|RL12_HALSA|LARGE ribosomal subunit protein P1|Halobacterium salinarum (strain ATCC

Query: 3 ILNEADK 9
ILNEAD+
Sbjct: 9 ILNEADE 15


>sp|Y1159_THEAC|UPF0179 protein Ta1159|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PCILNEADKI 10
PCI+ DK+
Sbjct: 59 PCIIFNGDKV 68


>sp|Y1250_THEVO|UPF0179 protein TV1250|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PCILNEADKI 10
PCI+ DK+
Sbjct: 56 PCIIFNGDKV 65


>sp|SYC_IGNH4|CYSTEINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 LNEADKI 10
+NEADK+
Sbjct: 397 VNEADKV 403


>sp|HIS51_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 PCILNEAD 8
PCILN+ +
Sbjct: 170 PCILNKKN 177


>sp|AROE_IGNH4|SHIKIMATE dehydrogenase (NADP(+))|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 LNEADKI 10
LNE DKI
Sbjct: 164 LNEVDKI 170




49|Sequence|241|250|EADKIIYKLI

>sp|MTAP_HYPBU|S-METHYL-5'-THIOADENOSINE phosphorylase|Hyperthermus butylicus (strain DSM 5456

Query: 1 EADKIIYKLI 10
+A KI+YKLI
Sbjct: 242 KAKKILYKLI 251


>sp|TIAS_STAMF|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Staphylothermus marinus (strain

Query: 1 EADKIIYKLI 10
E +KIIYKL+
Sbjct: 137 EKNKIIYKLL 146


>sp|CDC6_DESA1|ORC1-TYPE DNA replication protein|Desulfurococcus amylolyticus (strain DSM

Query: 1 EADKIIYKLI 10
E D +IYKL+
Sbjct: 159 EGDDLIYKLV 168


>sp|RS4_METBU|SMALL ribosomal subunit protein uS4|Methanococcoides burtonii (strain

Query: 1 EADKIIYKLI 10
EAD+++ KLI
Sbjct: 74 EADQLLTKLI 83


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 3 DKIIYKLI 10
D IIYKL+
Sbjct: 993 DNIIYKLV 1000


>sp|Y802_METJA|UNCHARACTERIZED protein MJ0802|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EADKIIYKL 9
E KIIYKL
Sbjct: 75 EGGKIIYKL 83


>sp|IF2P_METMP|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 4 KIIYKLI 10
KIIYKL+
Sbjct: 436 KIIYKLV 442


>sp|IF2P_METM5|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 4 KIIYKLI 10
KIIYKL+
Sbjct: 436 KIIYKLV 442


>sp|IF2P_METM7|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 4 KIIYKLI 10
KIIYKL+
Sbjct: 436 KIIYKLV 442


>sp|IF2P_METVS|PROBABLE translation initiation factor IF-2|Methanococcus vannielii (strain

Query: 4 KIIYKLI 10
KIIYKL+
Sbjct: 436 KIIYKLV 442


>sp|RPO3_PYRIL|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum islandicum (strain DSM 4184

Query: 1 EADKIIY 7
E+DKI+Y
Sbjct: 102 ESDKIVY 108


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 EADKIIY 7
E DKI+Y
Sbjct: 37 EVDKIVY 43


>sp|SEPS_METJA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DKIIYKLI 10
D IIYKL+
Sbjct: 471 DGIIYKLV 478




50|Sequence|246|255|IYKLIRLDSL

>sp|TIAS_STAMF|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Staphylothermus marinus (strain

Query: 1 IYKLIRLD 8
IYKL+R D
Sbjct: 142 IYKLLRKD 149


>sp|Y612_ARCFU|UNCHARACTERIZED protein AF_0612|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IYKLIRLDSL 10
I+K +RLD L
Sbjct: 46 IFKKLRLDEL 55




51|Sequence|251|260|RLDSLSAYWN

>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 RLDSLSAYW 9
+L SLS YW
Sbjct: 497 KLTSLSKYW 505


>sp|LEUC_HALVD|3-ISOPROPYLMALATE dehydratase large subunit|Haloferax volcanii (strain ATCC 29605

Query: 1 RLDSLSAYW 9
R D L YW
Sbjct: 256 RFDELKPYW 264


>sp|DNLI_METJA|DNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LDSLSAYWN 10
LD+LS Y+N
Sbjct: 175 LDALSVYFN 183


>sp|AATA_METST|A-TYPE ATP synthase subunit A|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 LDSLSAYWN 10
+DS++ +WN
Sbjct: 438 VDSITNWWN 446


>sp|DPCKG_HALS3|GTP-DEPENDENT dephospho-CoA kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 RLDSLSAYW 9
RL++ +A+W
Sbjct: 165 RLETTAAFW 173


>sp|MTAD2_ARCFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RLDSLSAYW 9
RLD + YW
Sbjct: 88 RLDEDAVYW 96


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 3 DSLSAYW 9
D+L +YW
Sbjct: 497 DALKSYW 503


>sp|SYTC_SULAC|THREONINE--TRNA ligase catalytic subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 3 DSLSAYW 9
DSLS +W
Sbjct: 375 DSLSRWW 381




52|Sequence|256|265|SAYWNVNCSM

>sp|SYFA_METTH|PHENYLALANINE--TRNA ligase alpha subunit|Methanothermobacter thermautotrophicus (strain

Query: 1 SAYWNVNC 8
SA+WN +C
Sbjct: 276 SAFWNFDC 283


>sp|FPOC_METMA|F(420)H(2) dehydrogenase subunit C|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SAYWNVN 7
S YWN N
Sbjct: 101 SVYWNAN 107


>sp|ATRMA_PYRAB|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 SAYWNVNCS 9
S YW+VN S
Sbjct: 208 SIYWSVNRS 216


>sp|ATRMA_PYRHO|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 1 SAYWNVN 7
S YW+VN
Sbjct: 209 SIYWSVN 215


>sp|CEDB_SULAC|DNA import protein CedB|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SAYWNVN 7
+ +WNVN
Sbjct: 269 AVFWNVN 275


>sp|Y2093_ARCFU|UNCHARACTERIZED protein AF_2093|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SAYWNVNCS 9
SAYW V +
Sbjct: 234 SAYWRVTVT 242




53|Sequence|261|270|VNCSMSYQRS

>sp|KAD_METBF|ADENYLATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 2 NCSMSYQRS 10
NC SY R+
Sbjct: 131 NCGASYHRT 139




54|Sequence|266|275|SYQRSREQIL

>sp|PFDB_METMJ|PREFOLDIN subunit beta|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 YQRSREQIL 10
Q+S+EQ+L
Sbjct: 64 MQKSKEQVL 72


>sp|THIN_METTH|THIAMINE-PHOSPHATE synthase ThiN|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 SYQRSRE 7
SY RSRE
Sbjct: 113 SYDRSRE 119


>sp|RAD50_METTH|DNA double-strand break repair Rad50|Methanothermobacter

Query: 2 YQRSREQI 9
Y+RSRE++
Sbjct: 476 YKRSREEL 483




55|Sequence|271|280|REQILDQLKN

>sp|MRE11_METJA|DNA double-strand break repair protein|Methanocaldococcus jannaschii

Query: 1 REQILDQLKN 10
RE++LD+LKN
Sbjct: 133 REEMLDKLKN 142


>sp|APGM_METS3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanobrevibacter smithii (strain ATCC

Query: 1 REQILDQLKN 10
R+ I+DQ+KN
Sbjct: 284 RDTIIDQVKN 293


>sp|HEM1_CENSY|GLUTAMYL-TRNA reductase|Cenarchaeum symbiosum (strain A)

Query: 2 EQILDQLKN 10
EQIL Q+KN
Sbjct: 113 EQILGQVKN 121


>sp|T1R2_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 REQILDQLKN 10
RE++LD +KN
Sbjct: 225 RERVLDTIKN 234


Query: 2 EQILDQLKN 10
E+ILD +KN
Sbjct: 77 EEILDYIKN 85


>sp|MPGS_AERPE|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 REQILDQLKN 10
+ +ILDQLK+
Sbjct: 340 KSRILDQLKS 349


>sp|CBID_METKA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 REQILDQLK 9
REQI+D L+
Sbjct: 154 REQIVDNLR 162


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EQILDQLKN 10
E ILDQLK+
Sbjct: 175 ENILDQLKS 183


>sp|HISX_SULAC|HISTIDINOL dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EQILDQLK 9
EQIL+Q+K
Sbjct: 22 EQILNQVK 29


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EQILDQLKN 10
E+I+D+LKN
Sbjct: 456 EKIVDELKN 464


>sp|UPPS_THEAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Thermoplasma

Query: 1 REQILDQLK 9
RE+ILD +K
Sbjct: 161 REEILDAIK 169


>sp|HEM1_METJA|GLUTAMYL-TRNA reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EQILDQLKN 10
+QIL QLKN
Sbjct: 92 DQILGQLKN 100


>sp|Y431_NANEQ|UPF0215 protein NEQ431|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 EQILDQLKN 10
E+I+D +KN
Sbjct: 52 EKIIDMIKN 60


>sp|RTCA_PYRHO|RNA 3'-terminal phosphate cyclase|Pyrococcus horikoshii (strain ATCC

Query: 2 EQILDQLK 9
+++LDQLK
Sbjct: 268 QELLDQLK 275


>sp|SYH_THEAC|HISTIDINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 REQILDQLKN 10
RE+ +DQL++
Sbjct: 195 REEFVDQLRS 204


>sp|ACDB1_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 2 EQILDQLKN 10
E+I+D LKN
Sbjct: 220 EEIIDYLKN 228


>sp|LEU1_SULTO|2-ISOPROPYLMALATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 REQILDQL 8
REQ+LD++
Sbjct: 119 REQVLDKI 126


>sp|Y631_METJA|PUTATIVE hydrogenase maturation protease MJ0631|Methanocaldococcus

Query: 1 REQILDQLKN 10
+E +LD+LKN
Sbjct: 2 KEMLLDKLKN 11


>sp|AOCD_METMP|ORNITHINE cyclodeaminase|Methanococcus maripaludis (strain DSM 14266

Query: 2 EQILDQLKN 10
+QIL++L+N
Sbjct: 62 DQILEELQN 70


>sp|PURP_METBF|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina barkeri (strain Fusaro

Query: 1 REQILDQLKN 10
++Q+L+ LKN
Sbjct: 4 KQQVLEFLKN 13


>sp|SYFA_METMA|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 QILDQLKN 10
QI+D LKN
Sbjct: 84 QIIDALKN 91


>sp|UPPS_THEVO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Thermoplasma

Query: 1 REQILDQLK 9
RE+ILD +K
Sbjct: 161 REEILDAIK 169


>sp|Y1518_METJA|UNCHARACTERIZED protein MJ1518|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 REQILDQLKN 10
RE++ D++KN
Sbjct: 211 REKLADEIKN 220


>sp|PURP_METAC|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina acetivorans (strain

Query: 1 REQILDQLKN 10
++Q+L+ LKN
Sbjct: 4 KQQVLEFLKN 13


>sp|GLFT_PICTO|GLUTAMATE formimidoyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 2 EQILDQLKN 10
E+I+D +KN
Sbjct: 25 EKIIDSIKN 33


>sp|PURP1_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 1|Methanosarcina mazei (strain ATCC

Query: 1 REQILDQLKN 10
++Q+L+ LKN
Sbjct: 4 KQQVLEFLKN 13


>sp|COMC_METJA|L-SULFOLACTATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EQILDQLKN 10
+++LD++KN
Sbjct: 283 DELLDEIKN 291




56|Sequence|276|285|DQLKNEILTS

>sp|Y2291_ARCFU|UNCHARACTERIZED protein AF_2291|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DQLKNEIL 8
DQLK EIL
Sbjct: 60 DQLKKEIL 67


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 1 DQLKNEIL 8
+QL+NEIL
Sbjct: 951 EQLQNEIL 958


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 1 DQLKNEIL 8
+QL+NEIL
Sbjct: 951 EQLQNEIL 958


>sp|GUAAB_THEAC|GMP synthase [glutamine-hydrolyzing] subunit B|Thermoplasma

Query: 1 DQLKNEI 7
DQ+KNEI
Sbjct: 8 DQIKNEI 14


>sp|RTCB_THEKO|TRNA-SPLICING ligase RtcB|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DQLKNEIL 8
D+L+NE+L
Sbjct: 423 DRLRNELL 430


>sp|BIOW_METVM|6-CARBOXYHEXANOATE--COA ligase|Methanocaldococcus vulcanius (strain ATCC 700851

Query: 1 DQLKNEILT 9
+ LKNEILT
Sbjct: 139 ESLKNEILT 147


>sp|METK_METJA|S-ADENOSYLMETHIONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DQLKNEI 7
D+LKNEI
Sbjct: 190 DELKNEI 196




57|Sequence|281|290|EILTSGNIPP

>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EILTSGNIPP 10
EIL SGNI P
Sbjct: 820 EILLSGNIDP 829


>sp|SYH_PYRCJ|HISTIDINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 ILTSGNIPP 10
I+T G +PP
Sbjct: 204 IMTRGGVPP 212


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 LTSGNIPP 10
+TSG +PP
Sbjct: 107 VTSGEVPP 114


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 LTSGNIPP 10
+TSG +PP
Sbjct: 106 VTSGQVPP 113


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 LTSGNIPP 10
+TSG +PP
Sbjct: 106 VTSGQVPP 113


>sp|HBCAL_NITMS|4-HYDROXYBUTYRATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 1 EILTSGNIP 9
EIL GN+P
Sbjct: 423 EILADGNVP 431


>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 LTSGNIPP 10
+TSG +PP
Sbjct: 106 VTSGQVPP 113


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LTSGNIPP 10
+TSG +PP
Sbjct: 106 VTSGQVPP 113


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LTSGNIPP 10
+TSG +PP
Sbjct: 106 VTSGQVPP 113


>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 ILTSGNIPP 10
++TSG PP
Sbjct: 108 LVTSGQTPP 116


>sp|Y335_METJA|UNCHARACTERIZED protein MJ0335|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EILTSGNIPP 10
EIL S +PP
Sbjct: 223 EILASAPVPP 232


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 LTSGNIPP 10
+TSG +PP
Sbjct: 103 VTSGAVPP 110


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 LTSGNIPP 10
+TSG +PP
Sbjct: 108 VTSGAVPP 115


>sp|HEM1_SULTO|GLUTAMYL-TRNA reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EILTSGNI 8
EIL++GNI
Sbjct: 394 EILSNGNI 401


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 ILTSGNIPP 10
++TSG PP
Sbjct: 108 LVTSGQTPP 116


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 ILTSGNIPP 10
++TSG PP
Sbjct: 107 LVTSGTTPP 115


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 LTSGNIPP 10
+TSG +PP
Sbjct: 103 VTSGAVPP 110


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 LTSGNIPP 10
+TSG +PP
Sbjct: 103 VTSGAVPP 110


>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ILTSGNIPP 10
++TSG PP
Sbjct: 108 LVTSGETPP 116


>sp|FAU1_HALWD|PROBABLE ribonuclease FAU-1|Haloquadratum walsbyi (strain DSM 16790

Query: 3 LTSGNIPP 10
+T+G+IPP
Sbjct: 479 VTAGHIPP 486


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 LTSGNIPP 10
+TSG +PP
Sbjct: 103 VTSGAVPP 110


>sp|MCRC_METBF|METHYL-COENZYME M reductase operon protein|Methanosarcina barkeri (strain Fusaro /

Query: 1 EILTSGNIP 9
EIL+ NIP
Sbjct: 122 EILSQANIP 130


>sp|MTD_METM7|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 1 EILTSGNIP 9
EIL++G IP
Sbjct: 81 EILSAGGIP 89


>sp|MTD_METM5|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 1 EILTSGNIP 9
EIL++G IP
Sbjct: 81 EILSAGGIP 89


>sp|MTD_METMP|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 1 EILTSGNIP 9
EIL++G IP
Sbjct: 81 EILSAGGIP 89


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 LTSGNIPP 10
+TSG +PP
Sbjct: 107 VTSGIVPP 114


>sp|VHCG_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit G|Archaeoglobus profundus (strain

Query: 1 EILTSGNIPP 10
E + +GN+PP
Sbjct: 178 EAVITGNLPP 187


>sp|PDAD_THEVO|PYRUVOYL-DEPENDENT arginine decarboxylase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EILTSGNI 8
+ILT+GNI
Sbjct: 151 KILTTGNI 158


>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 LTSGNIPP 10
+TSG +PP
Sbjct: 92 VTSGLVPP 99


>sp|COMC_METTH|L-SULFOLACTATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 EILTSGNIP 9
EILT+ N+P
Sbjct: 14 EILTAMNVP 22


>sp|RPO11_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus islandicus (strain

Query: 1 EILTSGNIPP 10
+ILT G+I P
Sbjct: 56 KILTDGSIAP 65


>sp|RPO11_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus islandicus (strain

Query: 1 EILTSGNIPP 10
+ILT G+I P
Sbjct: 56 KILTDGSIAP 65


>sp|RPO11_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus islandicus (strain

Query: 1 EILTSGNIPP 10
+ILT G+I P
Sbjct: 56 KILTDGSIAP 65


>sp|RPO11_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus islandicus (strain

Query: 1 EILTSGNIPP 10
+ILT G+I P
Sbjct: 56 KILTDGSIAP 65


>sp|RPO11_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus islandicus (strain

Query: 1 EILTSGNIPP 10
+ILT G+I P
Sbjct: 56 KILTDGSIAP 65


>sp|RPO11_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus islandicus (strain

Query: 1 EILTSGNIPP 10
+ILT G+I P
Sbjct: 56 KILTDGSIAP 65


>sp|AROK_METM7|SHIKIMATE kinase|Methanococcus maripaludis (strain C7 /

Query: 1 EILTSGNIP 9
+I TSG+IP
Sbjct: 78 KISTSGDIP 86


>sp|Y1307_METJA|UNCHARACTERIZED protein MJ1307|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EILTSGNIP 9
EI+T+G IP
Sbjct: 215 EIITAGIIP 223


>sp|RPO11_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus shibatae (strain ATCC

Query: 1 EILTSGNIPP 10
+ILT G+I P
Sbjct: 56 KILTDGSIAP 65


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 LTSGNIPP 10
+TSG +PP
Sbjct: 105 VTSGVVPP 112


>sp|QUEE_PYRAE|7-CARBOXY-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EILTSGNIPP 10
E+ TSG PP
Sbjct: 103 EVETSGAYPP 112


>sp|AROK_METM5|SHIKIMATE kinase|Methanococcus maripaludis (strain C5 /

Query: 1 EILTSGNIP 9
+I TSG+IP
Sbjct: 78 KISTSGDIP 86


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 LTSGNIPP 10
+TSG +PP
Sbjct: 105 VTSGVVPP 112


>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 LTSGNIPP 10
+TSG +PP
Sbjct: 108 VTSGLVPP 115


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 LTSGNIPP 10
+TSG +PP
Sbjct: 108 VTSGLVPP 115


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 LTSGNIPP 10
+TSG +PP
Sbjct: 108 VTSGLVPP 115


>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 LTSGNIPP 10
+TSG +PP
Sbjct: 108 VTSGLVPP 115


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 LTSGNIPP 10
+TSG +PP
Sbjct: 108 VTSGLVPP 115


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 LTSGNIPP 10
+TSG +PP
Sbjct: 108 VTSGLVPP 115


>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 LTSGNIPP 10
+TSG +PP
Sbjct: 109 VTSGIVPP 116


>sp|RPO11_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo11|Saccharolobus solfataricus (strain

Query: 1 EILTSGNIPP 10
+ILT G+I P
Sbjct: 56 KILTDGSITP 65


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LTSGNIPP 10
+TSG +PP
Sbjct: 108 VTSGLVPP 115


>sp|PFDB_METPE|PREFOLDIN subunit beta|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 EILTSGNIPP 10
E L GN PP
Sbjct: 109 EALEGGNRPP 118




58|Sequence|286|295|GNIPPNYQYI

>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IPPNYQYI 10
I PNY+YI
Sbjct: 860 IKPNYKYI 867


>sp|IMDH_THEAC|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 PPNYQ 8
PPNYQ
Sbjct: 475 PPNYQ 479


>sp|HIS7_METB6|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanoregula boonei (strain DSM 21154

Query: 1 GNIPPN 6
GNIPP+
Sbjct: 126 GNIPPD 131


>sp|PFDB_NATPD|PREFOLDIN subunit beta|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GNIPPNYQ 8
GN+PP Q
Sbjct: 3 GNLPPEAQ 10


>sp|PFDB_HALSA|PREFOLDIN subunit beta|Halobacterium salinarum (strain ATCC 700922

Query: 1 GNIPPNYQ 8
GN+PP Q
Sbjct: 3 GNLPPEAQ 10


>sp|PFDB_HALS3|PREFOLDIN subunit beta|Halobacterium salinarum (strain ATCC 29341

Query: 1 GNIPPNYQ 8
GN+PP Q
Sbjct: 3 GNLPPEAQ 10


>sp|PFDB_HALMA|PREFOLDIN subunit beta|Haloarcula marismortui (strain ATCC 43049

Query: 1 GNIPPNYQ 8
GN+PP Q
Sbjct: 3 GNLPPEAQ 10


>sp|KPTA_METAC|PROBABLE RNA 2'-phosphotransferase|Methanosarcina acetivorans (strain ATCC

Query: 3 IPPNYQYI 10
IPP Y Y+
Sbjct: 197 IPPEYLYV 204


>sp|HEM3_THEVO|PROBABLE porphobilinogen deaminase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 NIPPNYQYI 10
NIP Y YI
Sbjct: 285 NIPREYGYI 293


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PPNYQYI 10
PP +QYI
Sbjct: 506 PPTHQYI 512


>sp|RS2_THEPD|SMALL ribosomal subunit protein uS2|Thermofilum pendens (strain DSM 2475

Query: 1 GNIPPN 6
G+IPPN
Sbjct: 188 GDIPPN 193


>sp|AATC_HALSA|A-TYPE ATP synthase subunit C|Halobacterium salinarum (strain ATCC

Query: 4 PPNYQYI 10
P NY+Y+
Sbjct: 6 PANYEYV 12


>sp|AATC_HALS3|A-TYPE ATP synthase subunit C|Halobacterium salinarum (strain ATCC 29341

Query: 4 PPNYQYI 10
P NY+Y+
Sbjct: 6 PANYEYV 12


>sp|PSLS_METTH|PHOSPHOSULFOLACTATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GNIPP 5
GNIPP
Sbjct: 231 GNIPP 235


>sp|GYAR_KORCO|GLYOXYLATE reductase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GNIPPN 6
G IPPN
Sbjct: 312 GEIPPN 317


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PPNYQY 9
PPNY Y
Sbjct: 387 PPNYGY 392


>sp|MRE11_THEVO|DNA double-strand break repair protein|Thermoplasma volcanium (strain

Query: 2 NIPPNYQYI 10
++P NY YI
Sbjct: 181 DLPMNYSYI 189


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 1 GNIPPNYQY 9
G +P NY+Y
Sbjct: 326 GYMPMNYEY 334


>sp|GLCD1_CALMQ|GLUCOSE 1-dehydrogenase 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 GNIPPNYQYI 10
G PP QY+
Sbjct: 51 GKAPPGSQYL 60


>sp|ARGD_METJA|ACETYLORNITHINE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IPPNYQYI 10
+PP ++Y+
Sbjct: 161 LPPGFKYV 168


>sp|CDC62_METTH|ORC1-TYPE DNA replication protein 2|Methanothermobacter thermautotrophicus

Query: 3 IPPNYQY 9
+P NY+Y
Sbjct: 31 VPENYRY 37


>sp|GYAR_THELN|GLYOXYLATE reductase|Thermococcus litoralis (strain ATCC 51850

Query: 1 GNIPPN 6
G IPPN
Sbjct: 314 GEIPPN 319


>sp|FLAB5_PYRAB|FLAGELLIN B5|Pyrococcus abyssi (strain GE5 /

Query: 1 GNIPPNYQYI 10
G IPPN + +
Sbjct: 184 GGIPPNTKVV 193


>sp|RS4_METAR|SMALL ribosomal subunit protein uS4|Methanocella arvoryzae (strain DSM

Query: 1 GNIPPNYQYI 10
GN+P + YI
Sbjct: 65 GNLPEDSHYI 74


>sp|VHCG_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit G|Archaeoglobus profundus (strain

Query: 1 GNIPPNYQYI 10
GN+PP +I
Sbjct: 183 GNLPPKGSWI 192


>sp|TDH_PYRFU|L-THREONINE 3-dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NIPPNY 7
NIPP Y
Sbjct: 142 NIPPEY 147


>sp|KPTA_METMA|PROBABLE RNA 2'-phosphotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 IPPNYQYI 10
IPP+Y ++
Sbjct: 197 IPPDYLFV 204


>sp|GATD_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanobrevibacter smithii (strain ATCC

Query: 2 NIPPNYQY 9
+I PNY+Y
Sbjct: 280 DINPNYRY 287


>sp|Y1852_ARCFU|UNCHARACTERIZED protein AF_1852|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GNIPPNY 7
GN+P NY
Sbjct: 265 GNLPANY 271


>sp|Y995_METJA|UNCHARACTERIZED protein MJ0995|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IPPNYQ 8
IPPNY+
Sbjct: 140 IPPNYK 145


>sp|Y274_METJA|UNCHARACTERIZED protein MJ0274|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 PNYQYI 10
PNY YI
Sbjct: 202 PNYPYI 207




59|Sequence|291|300|NYQYIFQPIS

>sp|TF2B_METJA|TRANSCRIPTION initiation factor IIB|Methanocaldococcus jannaschii (strain ATCC

Query: 1 NYQYIFQPIS 10
NY++ F P+S
Sbjct: 156 NYKFKFMPVS 165


>sp|HPRL_HALUD|HGPRTASE-LIKE protein|Halorhabdus utahensis (strain DSM 12940

Query: 2 YQYIFQPIS 10
YQY PIS
Sbjct: 19 YQYFVHPIS 27


>sp|HPRL_HALLT|HGPRTASE-LIKE protein|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 YQYIFQPIS 10
YQY PIS
Sbjct: 19 YQYFVHPIS 27


>sp|HPRT_METIK|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanotorris igneus (strain DSM 5666

Query: 1 NYQYIFQPIS 10
+Y+Y PIS
Sbjct: 17 DYEYFIHPIS 26


>sp|HPRL2_NATMM|HGPRTASE-LIKE protein 2|Natrialba magadii (strain ATCC 43099

Query: 2 YQYIFQPIS 10
Y+Y+ PIS
Sbjct: 19 YEYLVHPIS 27


>sp|HPRL2_HALWD|HGPRTASE-LIKE protein 2|Haloquadratum walsbyi (strain DSM 16790

Query: 2 YQYIFQPIS 10
Y+Y+ PIS
Sbjct: 19 YEYLVHPIS 27


>sp|HPRL2_HALWC|HGPRTASE-LIKE protein 2|Haloquadratum walsbyi (strain DSM 16854

Query: 2 YQYIFQPIS 10
Y+Y+ PIS
Sbjct: 19 YEYLVHPIS 27


>sp|HPRL2_HALTV|HGPRTASE-LIKE protein 2|Haloterrigena turkmenica (strain ATCC 51198

Query: 2 YQYIFQPIS 10
Y+Y+ PIS
Sbjct: 19 YEYLVHPIS 27


>sp|HPRL1_HALJB|HGPRTASE-LIKE protein 1|Halalkalicoccus jeotgali (strain DSM 18796

Query: 2 YQYIFQPIS 10
Y+Y+ PIS
Sbjct: 19 YEYLVHPIS 27


>sp|Y1629_ARCFU|UNCHARACTERIZED protein AF_1629|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NYQYIFQPIS 10
N IFQPIS
Sbjct: 83 NVNLIFQPIS 92


>sp|HPRL1_HALVD|HGPRTASE-LIKE protein 1|Haloferax volcanii (strain ATCC 29605

Query: 1 NYQYIFQPIS 10
+Y+Y PIS
Sbjct: 18 DYEYFVHPIS 27


>sp|HPRL_HALBP|HGPRTASE-LIKE protein|Halogeometricum borinquense (strain ATCC 700274

Query: 2 YQYIFQPIS 10
Y+Y PIS
Sbjct: 19 YEYFVHPIS 27


>sp|HPRL1_HALWD|HGPRTASE-LIKE protein 1|Haloquadratum walsbyi (strain DSM 16790

Query: 1 NYQYIFQPIS 10
+Y+Y P+S
Sbjct: 18 DYEYFVHPVS 27


>sp|HPRL1_HALWC|HGPRTASE-LIKE protein 1|Haloquadratum walsbyi (strain DSM 16854

Query: 1 NYQYIFQPIS 10
+Y+Y P+S
Sbjct: 18 DYEYFVHPVS 27


>sp|HPRL2_HALVD|HGPRTASE-LIKE protein 2|Haloferax volcanii (strain ATCC 29605

Query: 2 YQYIFQPIS 10
Y Y+ PIS
Sbjct: 19 YSYLVHPIS 27


>sp|HPRT_METEZ|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanohalobium evestigatum (strain

Query: 1 NYQYIFQPIS 10
NY Y PI+
Sbjct: 19 NYYYFINPIT 28


>sp|TRPD_PICTO|ANTHRANILATE phosphoribosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 NYQYIFQPI 9
NY YI P+
Sbjct: 140 NYVYILAPV 148


>sp|RS2_PICTO|SMALL ribosomal subunit protein uS2|Picrophilus torridus (strain ATCC

Query: 3 QYIFQPIS 10
QY F+P+S
Sbjct: 75 QYAFRPVS 82


>sp|Y1397_METJA|UNCHARACTERIZED protein MJ1397|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NYQYIFQP 8
NY YI +P
Sbjct: 228 NYSYIIEP 235


>sp|Y1386_ARCFU|UNCHARACTERIZED protein AF_1386|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YQYIFQPIS 10
+QY+ +P+S
Sbjct: 26 FQYLLRPLS 34




60|Sequence|296|305|FQPISASAKL

>sp|COBQ_METBF|PROBABLE cobyric acid synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 FQPISASAKL 10
F+P+ SAK+
Sbjct: 267 FEPLERSAKI 276




61|Sequence|301|310|ASAKLYMNPY

>sp|HELS_PYRFU|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SAKLYMNPY 10
+AKLY++PY
Sbjct: 486 TAKLYIDPY 494


>sp|COXX_SULTO|PROTOHEME IX farnesyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SAKLYMNP 9
S KLY+NP
Sbjct: 265 SVKLYLNP 272


>sp|THPS_SULAC|THERMOPSIN acidocaldarius (strain ATCC 33909

Query: 2 SAKLYMNPY 10
S+ LY+NPY
Sbjct: 38 SSGLYVNPY 46


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 3 AKLYMNPY 10
A LY+NP+
Sbjct: 503 ADLYINPF 510


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 AKLYMNPY 10
A LY+NP+
Sbjct: 496 ADLYINPF 503


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 3 AKLYMNPY 10
A LY+NP+
Sbjct: 503 ADLYINPF 510


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 5 LYMNPY 10
LYM PY
Sbjct: 341 LYMGPY 346


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 5 LYMNPY 10
LYM PY
Sbjct: 341 LYMGPY 346


>sp|EF2_DESMO|ELONGATION factor 2|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 5 LYMNPY 10
LYM PY
Sbjct: 339 LYMGPY 344




62|Sequence|306|315|YMNPYAESEL

>sp|CDC6C_HALMA|ORC1-TYPE DNA replication protein 3|Haloarcula marismortui (strain ATCC 43049

Query: 1 YMNPYAESEL 10
Y NPY ++E+
Sbjct: 205 YFNPYGQAEI 214


>sp|PYRG_PYRAE|CTP synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 MNPYAESEL 10
MNPYA E+
Sbjct: 51 MNPYAHGEV 59


>sp|TSR3_METJA|16S rRNA aminocarboxypropyltransferase|Methanocaldococcus jannaschii

Query: 2 MNPYAESEL 10
+NPYAE L
Sbjct: 47 LNPYAEKAL 55


>sp|MTD_METMA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina mazei

Query: 1 YMNPYAESE 9
+ NPYA+S+
Sbjct: 190 FANPYAKSK 198


>sp|MTD_METST|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosphaera

Query: 1 YMNPYAESE 9
+ NPYA+S+
Sbjct: 187 FKNPYAKSK 195


>sp|RL13_NATPD|LARGE ribosomal subunit protein uL13|Natronomonas pharaonis (strain ATCC

Query: 1 YM-NPYAESEL 10
YM NPY E+E+
Sbjct: 104 YMGNPYEEAEV 114


>sp|CDC61_HALSA|ORC1-TYPE DNA replication protein 1|Halobacterium salinarum (strain ATCC

Query: 1 YMNPYAESEL 10
+ +PY E+EL
Sbjct: 179 HFDPYHENEL 188


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 1 YMNPYAE 7
YM PY E
Sbjct: 342 YMGPYRE 348


>sp|Y516_AERPE|UPF0113 protein APE_0516.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 MNPYAE 7
+NPYAE
Sbjct: 35 VNPYAE 40


>sp|AGLB1_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YMNPYA 6
Y+NPYA
Sbjct: 615 YVNPYA 620


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 YMNPYAE 7
YM PY E
Sbjct: 342 YMGPYRE 348


>sp|DGGGP_METS3|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanobrevibacter smithii (strain ATCC

Query: 2 MNPYAE 7
MNPY E
Sbjct: 1 MNPYVE 6


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 MNPYAE 7
+NPYAE
Sbjct: 498 VNPYAE 503


>sp|EF2_DESMO|ELONGATION factor 2|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 1 YMNPYAE 7
YM PY E
Sbjct: 340 YMGPYRE 346


>sp|AGLB1_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YMNPYAESE 9
Y+NPY + E
Sbjct: 451 YLNPYEKPE 459




63|Sequence|311|320|AESELKTPKL

>sp|SYT_METMP|THREONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 ESELKTPK 9
ESELK PK
Sbjct: 577 ESELKKPK 584


>sp|TAW22_NANEQ|TRNA (guanine(37)-N(1))/4-demethylwyosine(37)-methyltransferase

Query: 2 ESELKTPKL 10
E+EL+ PKL
Sbjct: 44 ETELRLPKL 52


>sp|SYT_METBF|THREONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 AESELKTPK 9
AESE K PK
Sbjct: 589 AESEQKKPK 597


>sp|HIS6_METM6|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 3 SELKTPKL 10
S +KTPKL
Sbjct: 105 SAVKTPKL 112


>sp|AROA_METMP|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain DSM

Query: 3 SELKTP 8
SELKTP
Sbjct: 74 SELKTP 79




64|Sequence|316|325|KTPKLDCNIE

>sp|MAP2_METJA|METHIONINE aminopeptidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TPKLDCNIE 10
TPKL+ N+E
Sbjct: 67 TPKLNDNLE 75


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KTPKLDCNIE 10
K PKLD N E
Sbjct: 199 KKPKLDHNQE 208




65|Sequence|321|330|DCNIEIQNIA

>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 CNIEIQNI 9
CNIEI+ I
Sbjct: 475 CNIEIKEI 482


>sp|PYRDB_METTH|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanothermobacter

Query: 2 CNIEIQN 8
CNIE++N
Sbjct: 10 CNIELRN 16


>sp|Y120_METTH|PUTATIVE NADH dehydrogenase/NAD(P)H nitroreductase|Methanothermobacter

Query: 1 DCNIEIQNI 9
DC+I QNI
Sbjct: 116 DCSIASQNI 124


>sp|MCH_METHJ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DCNIEIQNI 9
DC I+++N+
Sbjct: 156 DCGIDVENL 164


>sp|SYE_METBF|GLUTAMATE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 CNIEIQNIA 10
CNIEI +++
Sbjct: 481 CNIEITSLS 489


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 CNIEIQNIA 10
CNIEI +++
Sbjct: 481 CNIEITSLS 489


>sp|MCH_METJA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DCNIEIQNI 9
+C +E++N+
Sbjct: 158 ECGVEVENV 166


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CNIEIQNIA 10
CN+EI +++
Sbjct: 481 CNVEITSLS 489


>sp|EF2_METRM|ELONGATION factor 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 DCNIEIQN 8
+CN +IQN
Sbjct: 641 NCNKDIQN 648


>sp|HDRB2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 1 DCNIEIQN 8
D NIE++N
Sbjct: 88 DANIELKN 95




66|Sequence|326|335|IQNIAIELTK

>sp|GLYA_ARCFU|SERINE hydroxymethyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 1 IQNIAIELTK 10
I+++AIELT+
Sbjct: 82 IESMAIELTR 91


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 1 IQNIAIELT 9
I+NI IE+T
Sbjct: 214 IRNIPIEIT 222


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 IQNIAIELT 9
++NI++E+T
Sbjct: 211 VRNISVEIT 219


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 IQNIAIELT 9
++NI++E+T
Sbjct: 211 VRNISVEIT 219


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 IQNIAIELT 9
++NI++E+T
Sbjct: 211 VRNISVEIT 219


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 1 IQNIAIELT 9
++NI++E+T
Sbjct: 211 VRNISVEIT 219




67|Sequence|331|340|IELTKPQYLS

>sp|SYT_STAMF|THREONINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 IELTKPQYLS 10
+ LT P+YLS
Sbjct: 596 VSLTMPKYLS 605


>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 IELTKPQYL 9
+++ KPQYL
Sbjct: 200 VKVAKPQYL 208


>sp|COXX2_NATPD|PROTOHEME IX farnesyltransferase 2|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IELTKPQ 7
+ELTKP+
Sbjct: 153 VELTKPR 159


>sp|RS9_META3|SMALL ribosomal subunit protein uS9|Methanococcus aeolicus (strain ATCC

Query: 1 IELTKPQYLS 10
IE+ +P+Y++
Sbjct: 33 IEIVEPKYIN 42


>sp|TIAS_METKA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanopyrus kandleri (strain

Query: 3 LTKPQYL 9
L+KP+YL
Sbjct: 414 LSKPEYL 420


>sp|LEUD_SULTO|3-ISOPROPYLMALATE dehydratase small subunit|Sulfurisphaera tokodaii (strain DSM

Query: 1 IELTKPQYLS 10
++ T PQYL+
Sbjct: 25 LKYTDPQYLA 34


>sp|G1PDH_METVS|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus vannielii (strain ATCC 35089

Query: 1 IELTKPQYLS 10
+ LT+P YL+
Sbjct: 111 VSLTQPSYLA 120


>sp|G3P_THEVO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 TKPQYLS 10
TKP Y+S
Sbjct: 34 TKPDYIS 40


>sp|LEUD_SULAC|3-ISOPROPYLMALATE dehydratase small subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 IELTKPQYLS 10
++ T PQYL+
Sbjct: 25 LKYTDPQYLA 34


>sp|Y1482_METLZ|DNA-BINDING protein Mlab_1482|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 IELTKPQY 8
I LTKP++
Sbjct: 57 IRLTKPEF 64


>sp|LEUD_SACI6|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain M.16.4

Query: 1 IELTKPQYLS 10
++ T PQYL+
Sbjct: 25 LKYTDPQYLA 34


>sp|LEUD_SACI4|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 1 IELTKPQYLS 10
++ T PQYL+
Sbjct: 25 LKYTDPQYLA 34


>sp|LEUD_SACS2|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 IELTKPQYLS 10
++ T PQYL+
Sbjct: 25 LKYTDPQYLA 34


>sp|LEUD_SACI7|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 1 IELTKPQYLS 10
++ T PQYL+
Sbjct: 25 LKYTDPQYLA 34


>sp|LEUD_SACI2|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 1 IELTKPQYLS 10
++ T PQYL+
Sbjct: 25 LKYTDPQYLA 34


>sp|LEUD_SACI3|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 1 IELTKPQYLS 10
++ T PQYL+
Sbjct: 25 LKYTDPQYLA 34


>sp|LEUD_SACI1|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 1 IELTKPQYLS 10
++ T PQYL+
Sbjct: 25 LKYTDPQYLA 34


>sp|CCA_SACSH|CCA-ADDING enzyme|Saccharolobus shibatae (strain ATCC 51178

Query: 1 IELTKP 6
IELTKP
Sbjct: 198 IELTKP 203


>sp|CCA_SACI6|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IELTKP 6
IELTKP
Sbjct: 198 IELTKP 203


>sp|CCA_SACI4|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IELTKP 6
IELTKP
Sbjct: 198 IELTKP 203


>sp|CCA_SACI3|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 IELTKP 6
IELTKP
Sbjct: 198 IELTKP 203


>sp|CCA_SACI2|CCA-ADDING enzyme|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 IELTKP 6
IELTKP
Sbjct: 198 IELTKP 203


>sp|CCA_SACI1|CCA-ADDING enzyme|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 IELTKP 6
IELTKP
Sbjct: 198 IELTKP 203


>sp|CCA_SACS2|CCA-ADDING enzyme|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IELTKP 6
IELTKP
Sbjct: 198 IELTKP 203


>sp|CCA_SACI7|CCA-ADDING enzyme|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 IELTKP 6
IELTKP
Sbjct: 198 IELTKP 203




68|Sequence|336|345|PQYLSMIDLL

>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 QYLSMID 8
QYLSM+D
Sbjct: 752 QYLSMVD 758


>sp|DADD_METST|5'-DEOXYADENOSINE deaminase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 QYLSMIDLL 10
+YL IDLL
Sbjct: 231 EYLDSIDLL 239


>sp|ABLA_METMP|L-LYSINE 2,3-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PQYLSMIDL 9
P Y S+ID+
Sbjct: 71 PYYASLIDI 79




69|Sequence|341|350|MIDLLESVDY

>sp|SYY_SULAC|TYROSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 DLLESVDY 10
DL+E++DY
Sbjct: 116 DLVENIDY 123


>sp|G3P_THEKO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 DLLESVD 9
DLLE+VD
Sbjct: 75 DLLENVD 81


>sp|AROD_META3|3-DEHYDROQUINATE dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 DLLESVD 9
DLLESVD
Sbjct: 33 DLLESVD 39


>sp|MRE11_METTH|DNA double-strand break repair protein|Methanothermobacter

Query: 1 MIDLLES 7
MID+LES
Sbjct: 262 MIDILES 268


>sp|Y2113_ARCFU|UNCHARACTERIZED protein AF_2113|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DLLESVDY 10
+LLES DY
Sbjct: 10 ELLESFDY 17




70|Sequence|346|355|ESVDYMVRNA

>sp|DAPAT_METST|LL-DIAMINOPIMELATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ESVDYMVRNA 10
E++DY V+NA
Sbjct: 317 ENLDYYVKNA 326


>sp|DAPAT_METTH|LL-DIAMINOPIMELATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 ESVDYMVRNA 10
ES+DY + NA
Sbjct: 316 ESIDYYMENA 325


>sp|COBQ_METMP|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ESVDYMVRN 9
ES+DY+ +N
Sbjct: 117 ESIDYLDKN 125


>sp|PYRE_SULAC|OROTATE phosphoribosyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 4 DYMVRN 9
DYMV+N
Sbjct: 188 DYMVKN 193




71|Sequence|351|360|MVRNAPYRKY

>sp|RL21_PYRIL|LARGE ribosomal subunit protein eL21|Pyrobaculum islandicum (strain DSM

Query: 1 MVRNAPYRKY 10
V NAP+R+Y
Sbjct: 49 FVENAPHRRY 58


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VRNAPYRKY 10
V NAP+R Y
Sbjct: 15 VDNAPHRSY 23


>sp|G1PDH_METKA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanopyrus kandleri (strain AV19 /

Query: 2 VRNAPYRKY 10
+RN PY +Y
Sbjct: 190 LRNEPYSEY 198


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 VRNAPYRKY 10
V NAP+R Y
Sbjct: 15 VDNAPHRPY 23


>sp|PGP_METMJ|PHOSPHOGLYCOLATE phosphatase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 VRNAPYR 8
VRNAP R
Sbjct: 197 VRNAPVR 203


>sp|SYFA_THEVO|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 3 RNAPYRKY 10
+ AP+RKY
Sbjct: 203 KTAPFRKY 210


>sp|COAD_THEKO|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 MVRNAPY 7
MVRN PY
Sbjct: 44 MVRNKPY 50


>sp|COAD_THEGJ|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 MVRNAPY 7
M+RN PY
Sbjct: 44 MIRNKPY 50


>sp|PUR7_METMJ|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 MVRNAPYRK 9
+VRN P+R+
Sbjct: 101 IVRNYPFRE 109


>sp|ASSY_ARCFU|ARGININOSUCCINATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MVRNAPYRKY 10
+ RN+PY Y
Sbjct: 345 VARNSPYALY 354


>sp|Y2099_SACI3|PROTEIN M1627_2099|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 MVRNAPYRKY 10
M+RN P KY
Sbjct: 171 MLRNKPNLKY 180


>sp|Y772_SACI1|PROTEIN YN1551_0772|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 MVRNAPYRKY 10
M+RN P KY
Sbjct: 171 MLRNKPNLKY 180


>sp|Y2186_SACI2|PROTEIN LS215_2186|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 MVRNAPYRKY 10
M+RN P KY
Sbjct: 171 MLRNKPNLKY 180


>sp|Y2147_SACI7|PROTEIN YG5714_2147|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 MVRNAPYRKY 10
M+RN P KY
Sbjct: 171 MLRNKPNLKY 180


>sp|Y2028_SACI6|PROTEIN M164_2028|Saccharolobus islandicus (strain M.16.4 /

Query: 1 MVRNAPYRKY 10
M+RN P KY
Sbjct: 171 MLRNKPNLKY 180


>sp|Y2021_SACI4|PROTEIN M1425_2021|Saccharolobus islandicus (strain M.14.25 /

Query: 1 MVRNAPYRKY 10
M+RN P KY
Sbjct: 171 MLRNKPNLKY 180


>sp|TRPB2_SACS2|TRYPTOPHAN synthase beta chain 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 MVRNA----PYRKY 10
MVR + PYRKY
Sbjct: 158 MVRTSYYAKPYRKY 171


>sp|FOLD_THEAC|BIFUNCTIONAL protein FolD|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MVRNAPYRK 9
+VRN PY K
Sbjct: 103 IVRNIPYYK 111


>sp|TRPB_THEAC|TRYPTOPHAN synthase beta chain|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MVRNA----PYRKY 10
MVR + PYRKY
Sbjct: 155 MVRTSFYAKPYRKY 168




72|Sequence|356|365|PYRKYKPYLP

>sp|GSA_METST|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PYRKYKPY 8
P R YKPY
Sbjct: 24 PVRAYKPY 31


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YRKYKPYLP 10
YR Y PY P
Sbjct: 514 YRVYLPYTP 522


>sp|PSB1_KORCO|PROTEASOME subunit beta 1|Korarchaeum cryptofilum (strain OPF8)

Query: 3 RKYKPYL 9
R+Y+PY
Sbjct: 93 RRYRPYF 99


>sp|AROA_META3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus aeolicus (strain ATCC

Query: 3 RKYKPY 8
+KYKPY
Sbjct: 231 QKYKPY 236


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PYRKYKPYLP 10
P RK P+LP
Sbjct: 70 PLRKVYPFLP 79


>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PYRKYKPY 8
PY Y PY
Sbjct: 700 PYASYNPY 707


>sp|RTCB_METTH|TRNA-SPLICING ligase RtcB|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 YRKYKPYLP 10
YR+YK +P
Sbjct: 258 YRRYKINIP 266


>sp|GSA_METJA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PYRKYKPY 8
P R +KPY
Sbjct: 26 PVRYFKPY 33


>sp|PGP_METMJ|PHOSPHOGLYCOLATE phosphatase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 RKYKPYL 9
+KY PYL
Sbjct: 225 KKYYPYL 231


>sp|HIS8_METJA|HISTIDINOL-PHOSPHATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RKYKPYLP 10
+K KPY+P
Sbjct: 15 KKLKPYVP 22


>sp|AATA_METS3|A-TYPE ATP synthase subunit A|Methanobrevibacter smithii (strain ATCC

Query: 1 PYRKYKPYL 9
P RK +PY+
Sbjct: 193 PVRKGRPYV 201


>sp|GCSPA_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 YRKYKPYLP 10
Y Y PY P
Sbjct: 98 YTSYTPYQP 106


>sp|GCSPA_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 YRKYKPYLP 10
Y Y PY P
Sbjct: 98 YTSYTPYQP 106


>sp|GCSPA_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 YRKYKPYLP 10
Y Y PY P
Sbjct: 98 YTSYTPYQP 106


>sp|GCSPA_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 YRKYKPYLP 10
Y Y PY P
Sbjct: 98 YTSYTPYQP 106


>sp|GCSPA_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 YRKYKPYLP 10
Y Y PY P
Sbjct: 98 YTSYTPYQP 106


>sp|GCSPA_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 YRKYKPYLP 10
Y Y PY P
Sbjct: 98 YTSYTPYQP 106


>sp|GCSPA_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 YRKYKPYLP 10
Y Y PY P
Sbjct: 98 YTSYTPYQP 106


>sp|TRPB_THEAC|TRYPTOPHAN synthase beta chain|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PYRKYKPYL 9
PYRKY Y+
Sbjct: 164 PYRKYMMYM 172


>sp|TRPB_THEVO|TRYPTOPHAN synthase beta chain|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PYRKYKPYL 9
PYRKY Y+
Sbjct: 164 PYRKYMMYM 172


>sp|GCSPA_METS5|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Metallosphaera

Query: 2 YRKYKPYLP 10
Y Y PY P
Sbjct: 98 YTAYTPYQP 106


>sp|AATC_THEGJ|A-TYPE ATP synthase subunit C|Thermococcus gammatolerans (strain DSM

Query: 3 RKYKPY 8
RKY PY
Sbjct: 30 RKYTPY 35


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 1 PYRKYKPYLP 10
P RK P+LP
Sbjct: 70 PLRKVYPFLP 79


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PYRKYKPYLP 10
P RK P+LP
Sbjct: 70 PLRKVYPFLP 79


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PYRKYKPYLP 10
P RK P+LP
Sbjct: 66 PLRKVYPFLP 75


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 RKYKPY 8
R YKPY
Sbjct: 373 RPYKPY 378


>sp|GCSPA_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 2 YRKYKPYLP 10
Y Y PY P
Sbjct: 98 YTAYTPYQP 106


>sp|TRM4_METJA|TRNA (cytosine(48)-C(5))-methyltransferase|Methanocaldococcus jannaschii

Query: 3 RKYKPYL 9
RKYK YL
Sbjct: 144 RKYKDYL 150




73|Sequence|361|370|KPYLPLHTNG

>sp|RNZ_NATPD|RIBONUCLEASE Z|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PYLPLHTNG 10
P P+H NG
Sbjct: 109 PSFPVHVNG 117


>sp|Y1385_METMA|UPF0147 protein MM_1385|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PYLPLHT 8
P LPLHT
Sbjct: 69 PNLPLHT 75


>sp|Y092_METAC|UPF0147 protein MA_0092|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PYLPLHT 8
P LPLHT
Sbjct: 73 PNLPLHT 79


>sp|SRP54_PYRAR|SIGNAL recognition particle 54 kDa|Pyrobaculum arsenaticum (strain DSM

Query: 3 YLPLHT 8
YLP+HT
Sbjct: 235 YLPIHT 240


>sp|DTDA_PYRCJ|D-AMINOACYL-TRNA deacylase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 KPYLPLHTNG 10
KP+L +HT G
Sbjct: 77 KPFLTVHTPG 86


>sp|UPPS_HALSA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Halobacterium

Query: 3 YLPLHTNG 10
+LP H NG
Sbjct: 213 FLPWHANG 220


>sp|UPPS_HALMA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Haloarcula

Query: 3 YLPLHTNG 10
+LP H NG
Sbjct: 213 FLPWHANG 220


>sp|ENDA_ARCFU|TRNA-SPLICING endonuclease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KPYLPL 6
KPYLP+
Sbjct: 91 KPYLPI 96


>sp|CBIMQ_METLZ|PUTATIVE fused cobalt transport protein|Methanocorpusculum labreanum (strain

Query: 2 PYLPLHTNG 10
PYLPL G
Sbjct: 379 PYLPLFIAG 387


>sp|YJ2B_PYRHO|UPF0147 protein PH1921.2|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PYLPLHT 8
P +PLHT
Sbjct: 72 PNMPLHT 78


>sp|Y239_PYRFU|UPF0147 protein PF0239|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PYLPLHT 8
P +PLHT
Sbjct: 72 PNMPLHT 78


>sp|Y1698_PYRAB|UPF0147 protein PYRAB16980|Pyrococcus abyssi (strain GE5 /

Query: 2 PYLPLHT 8
P +PLHT
Sbjct: 65 PNMPLHT 71


>sp|Y1419_METJA|UPF0147 protein MJ1419|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PYLPLHT 8
P +PLHT
Sbjct: 72 PNMPLHT 78


>sp|THII_METJA|PROBABLE tRNA sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PYLPLH 7
PYLP H
Sbjct: 356 PYLPKH 361


>sp|GCH1L_METTH|GTP cyclohydrolase 1 type 2|Methanothermobacter thermautotrophicus

Query: 2 PYLPLHTN 9
PYL +H+N
Sbjct: 71 PYLTVHSN 78


>sp|RRP41_PYRIL|EXOSOME complex component Rrp41|Pyrobaculum islandicum (strain DSM 4184

Query: 1 KPYLPLHTNG 10
KP +PL NG
Sbjct: 3 KPPVPLFQNG 12


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KPYLPLHT 8
KP+ PL+T
Sbjct: 593 KPFRPLYT 600


>sp|SYT_METB6|THREONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 KPYLPLHT 8
KP+ PL+T
Sbjct: 596 KPFRPLYT 603


>sp|Y996_METST|UPF0179 protein Msp_0996|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 PLHTNG 10
PLH NG
Sbjct: 56 PLHKNG 61


>sp|Y922_METBU|UPF0147 protein Mbur_0922|Methanococcoides burtonii (strain DSM 6242

Query: 2 PYLPLHT 8
P +PLHT
Sbjct: 67 PNIPLHT 73


>sp|SYT_METHJ|THREONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KPYLPLHT 8
KP+ PL+T
Sbjct: 592 KPFRPLYT 599


>sp|Y1199_ARCFU|UNCHARACTERIZED protein AF_1199|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PYLPLHTNG 10
P+L HT G
Sbjct: 99 PFLIFHTGG 107


>sp|Y1373_METJA|UNCHARACTERIZED protein MJ1373|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PYLPLHTNG 10
PY+ L NG
Sbjct: 144 PYIKLSVNG 152


>sp|DP2S_PYRFU|DNA polymerase II small subunit|Pyrococcus furiosus (strain ATCC

Query: 1 KPYLPLHTNG 10
+P LP+ T G
Sbjct: 64 EPILPVETKG 73




74|Sequence|366|375|LHTNGRRWWK

>sp|UVRB_METST|UVRABC system protein B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LHTNGRRW 8
+H NGR+W
Sbjct: 309 MHMNGRKW 316


>sp|UVRB_METTH|UVRABC system protein B|Methanothermobacter thermautotrophicus (strain

Query: 1 LHTNGRRW 8
+H +GR+W
Sbjct: 309 MHLSGRKW 316


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LHTNGRRW 8
+H +GR+W
Sbjct: 309 MHLSGRKW 316


>sp|PSB1_CALMQ|PROTEASOME subunit beta 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 HTNGRRWWK 10
H GR+ WK
Sbjct: 42 HRKGRKIWK 50


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LHTNGRRW 8
L NGR+W
Sbjct: 729 LSRNGRKW 736


>sp|PURO_METAR|IMP cyclohydrolase|Methanocella arvoryzae (strain DSM 22066

Query: 3 TNGRRW 8
TNGR W
Sbjct: 12 TNGRLW 17


>sp|HIS5_PYRAE|IMIDAZOLE glycerol phosphate synthase subunit|Pyrobaculum aerophilum (strain

Query: 1 LHTNGRRW 8
LH+ G RW
Sbjct: 131 LHSYGVRW 138


>sp|RS2_META3|SMALL ribosomal subunit protein uS2|Methanococcus aeolicus (strain ATCC

Query: 5 GRRWWK 10
GRRW K
Sbjct: 213 GRRWGK 218


>sp|TCPA_THEAD|NAD(+) hydrolase TcpA|Theionarchaea archaeon (strain DG-70-1)

Query: 1 LHTNGRRWW 9
LH+ G R W
Sbjct: 216 LHSKGLRVW 224


>sp|SYFA_METM5|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C5 /

Query: 1 LHTNGRRWWK 10
LH N +W K
Sbjct: 485 LHKNDMQWLK 494


>sp|AGOG_METMP|N-GLYCOSYLASE/DNA lyase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LHTNGRRWWK 10
L T G WW+
Sbjct: 63 LCTTGELWWE 72


>sp|FDHD_METJA|PROTEIN FdhD|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LHTNGRRW 8
++T+GR W
Sbjct: 218 IYTSGRLW 225




75|Sequence|371|380|RRWWKYAIDS

>sp|RFCL_HALWD|REPLICATION factor C large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 RWWKYAIDS 10
RWW+YA D+
Sbjct: 304 RWWRYATDN 312


>sp|Y3270_HALS3|UNCHARACTERIZED solute-binding protein OE_3270R|Halobacterium salinarum (strain

Query: 3 WWKYAIDS 10
WW+ A+D+
Sbjct: 134 WWRAAVDA 141


>sp|Y1595_HALSA|UNCHARACTERIZED solute-binding protein VNG_1595C|Halobacterium salinarum (strain

Query: 3 WWKYAIDS 10
WW+ A+D+
Sbjct: 134 WWRAAVDA 141


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 1 RRWWKYAID 9
R WW+Y ++
Sbjct: 418 REWWEYYLN 426


>sp|RNP1_NITMS|RIBONUCLEASE P protein component 1|Nitrosopumilus maritimus (strain SCM1)

Query: 4 WKYAIDS 10
WK++IDS
Sbjct: 60 WKFSIDS 66


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 2 RWWKYAIDS 10
+WW Y I S
Sbjct: 663 KWWVYDIKS 671


>sp|PELO_SACI6|PROTEIN pelota homolog|Saccharolobus islandicus (strain M.16.4 /

Query: 1 RRWWKYAID 9
++W KYA+D
Sbjct: 108 QQWSKYALD 116


>sp|PELO_SACI4|PROTEIN pelota homolog|Saccharolobus islandicus (strain M.14.25 /

Query: 1 RRWWKYAID 9
++W KYA+D
Sbjct: 108 QQWSKYALD 116


>sp|PELO_SACI3|PROTEIN pelota homolog|Saccharolobus islandicus (strain M.16.27)

Query: 1 RRWWKYAID 9
++W KYA+D
Sbjct: 108 QQWSKYALD 116


>sp|SYFA_METS5|PHENYLALANINE--TRNA ligase alpha subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 RWWKYA 7
+WW+Y+
Sbjct: 290 KWWRYS 295


>sp|PELO_SACI7|PROTEIN pelota homolog|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 RRWWKYAID 9
++W KYA+D
Sbjct: 108 QQWNKYALD 116


>sp|PELO_SACI2|PROTEIN pelota homolog|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 RRWWKYAID 9
++W KYA+D
Sbjct: 108 QQWNKYALD 116


>sp|PELO_SACI1|PROTEIN pelota homolog|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 RRWWKYAID 9
++W KYA+D
Sbjct: 108 QQWNKYALD 116


>sp|RFCL_PYRHO|REPLICATION factor C large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 WWKYAID 9
WKYAID
Sbjct: 298 LWKYAID 304


>sp|RFCL_PYRFU|REPLICATION factor C large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 WWKYAID 9
WKYAID
Sbjct: 298 LWKYAID 304


>sp|TRM14_ARCFU|TRNA (guanine(6)-N2)-methyltransferase|Archaeoglobus fulgidus (strain

Query: 1 RRWWK 5
+RWW+
Sbjct: 191 KRWWR 195


>sp|Y1319_METJA|UNCHARACTERIZED sodium-dependent transporter MJ1319|Methanocaldococcus jannaschii

Query: 3 WWKY 6
WWKY
Sbjct: 429 WWKY 432


>sp|Y819_PYRHO|UNCHARACTERIZED methyltransferase PH0819|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RWWKYAI 8
R W+YAI
Sbjct: 379 RLWEYAI 385


>sp|Y678_METJA|UNCHARACTERIZED protein MJ0678|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RWWK 5
RWWK
Sbjct: 288 RWWK 291


>sp|PCNA_THEPD|DNA polymerase sliding clamp|Thermofilum pendens (strain DSM 2475

Query: 2 RWWKYAIDS 10
R WKY I+S
Sbjct: 10 REWKYIIES 18


>sp|RFCL_METS3|REPLICATION factor C large subunit|Methanobrevibacter smithii (strain ATCC

Query: 3 WWKYAID 9
+WKYA D
Sbjct: 300 YWKYATD 306


>sp|SYW_THEON|TRYPTOPHAN--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 RRWWKYAI 8
R+ WKYA+
Sbjct: 273 RKIWKYAL 280


>sp|KCY_ARCFU|CYTIDYLATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RRWWK-YAID 9
RR+WK Y+ID
Sbjct: 132 RRYWKFYSID 141


>sp|RFCL_PYRAB|REPLICATION factor C large subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 WWKYAID 9
W+YAID
Sbjct: 298 LWRYAID 304


>sp|Y957_METJA|UNCHARACTERIZED protein MJ0957|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RRWWKYAID 9
R +WKY I+
Sbjct: 248 REYWKYQIN 256


>sp|SYFA_METJA|PHENYLALANINE--TRNA ligase alpha subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 RWWKYAID 9
R WKY D
Sbjct: 303 RCWKYKFD 310


>sp|RFCL_NATPD|REPLICATION factor C large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 3 WWKYAIDS 10
+W+YA D+
Sbjct: 295 YWRYATDN 302




76|Sequence|376|385|YAIDSVLEVH

>sp|NURA_PYRFU|DNA double-strand break repair nuclease|Pyrococcus furiosus (strain

Query: 1 YAIDSVLEV 9
Y+ID +LEV
Sbjct: 281 YSIDKLLEV 289


>sp|Y273_METTH|UPF0098 protein MTH_273|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 YAIDSVLEV 9
YA+D+VL++
Sbjct: 113 YALDTVLDL 121


>sp|G3P_METVS|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 YAIDSVLEV 9
YAIDS+ ++
Sbjct: 151 YAIDSITDI 159




77|Sequence|381|390|VLEVHIRRYT

>sp|SECD_METP4|PROTEIN-EXPORT membrane protein SecD|Methanolacinia petrolearia (strain DSM 11571

Query: 1 VLEVHIR 7
VLE+H+R
Sbjct: 299 VLEIHLR 305


>sp|Y535_METJA|UNCHARACTERIZED protein MJ0535|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VLEVHIRRY 9
+LE+H R Y
Sbjct: 57 ILEIHSRDY 65


>sp|SUI1_METTP|PROTEIN translation factor SUI1 homolog|Methanothrix thermoacetophila

Query: 1 VLEVHIRRY 9
V+++H RRY
Sbjct: 29 VVKIHKRRY 37


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 2 LEVHIRRY 9
LEV +RRY
Sbjct: 306 LEVRVRRY 313


>sp|RPO1C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Archaeoglobus fulgidus (strain ATCC

Query: 2 LEVHIRRYT 10
+EV IRR+T
Sbjct: 144 IEVDIRRFT 152


>sp|Y130_ARCFU|PROBABLE deacetylase AF_0130|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VLEVHIRRY 9
VLEVH Y
Sbjct: 58 VLEVHTEEY 66


>sp|KPRS_THEKO|RIBOSE-PHOSPHATE pyrophosphokinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VLEVHIRRY 9
+LEV I+R+
Sbjct: 22 ILEVEIKRF 30


>sp|Y1064_METJA|UNCHARACTERIZED acetyltransferase MJ1064|Methanocaldococcus jannaschii (strain

Query: 3 EVHIRRY 9
++HIR+Y
Sbjct: 49 KIHIRKY 55


>sp|CDC61_METMA|ORC1-TYPE DNA replication protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VLEVHIRR 8
VLE H+RR
Sbjct: 276 VLEEHVRR 283


>sp|CDC61_METAC|ORC1-TYPE DNA replication protein 1|Methanosarcina acetivorans (strain ATCC

Query: 1 VLEVHIRR 8
VLE H+RR
Sbjct: 276 VLEEHVRR 283


>sp|TRPB1_METTH|TRYPTOPHAN synthase beta chain 1|Methanothermobacter thermautotrophicus

Query: 2 LEVHIRRY 9
LE H+R Y
Sbjct: 43 LEYHLREY 50


>sp|G1PDH_METJA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanocaldococcus jannaschii (strain

Query: 2 LEVHIRRYT 10
LE+ +++YT
Sbjct: 59 LEIELKKYT 67




78|Sequence|386|395|IRRYTQMWSW

>sp|GLKA_THESM|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 IRRYTQMWSW 10
IRRY + W W
Sbjct: 104 IRRYLREWGW 113


>sp|GLKA_THELN|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus litoralis (strain ATCC

Query: 1 IRRYTQMWSW 10
+RRY + W W
Sbjct: 104 VRRYLREWGW 113


>sp|GLKA_PYRAB|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 IRRYTQMWSW 10
+R Y + W W
Sbjct: 95 VRNYMRQWGW 104


>sp|GLKA_PYRHO|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus horikoshii (strain ATCC

Query: 1 IRRYTQMWSW 10
+R Y + W W
Sbjct: 99 VREYMRKWGW 108


>sp|GGR_ARCFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IRRYTQMW 8
+RRY ++W
Sbjct: 315 LRRYDELW 322


>sp|NIKR2_METAC|PUTATIVE nickel-responsive regulator 2|Methanosarcina acetivorans (strain

Query: 1 IRRYTQMWSW 10
IR Y Q + W
Sbjct: 40 IRTYNQHYEW 49


>sp|RS172_METAC|SMALL ribosomal subunit protein uS17B|Methanosarcina acetivorans

Query: 1 IRRYTQMWSW 10
++RY + WS+
Sbjct: 49 MKRYREKWSY 58


>sp|TRM56_AERPE|TRNA (cytidine(56)-2'-O)-methyltransferase|Aeropyrum pernix (strain

Query: 2 RRYTQMW 8
RRY +MW
Sbjct: 75 RRYVRMW 81


>sp|Y1926_THEKO|UPF0145 protein TK1926|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IRRYTQM 7
+R YTQM
Sbjct: 53 VREYTQM 59


>sp|KAD6_METKA|PUTATIVE adenylate kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 IRRYTQMW 8
+RRY + W
Sbjct: 57 LRRYVEEW 64


>sp|NK_METTH|NUCLEOSIDE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 IRRYTQMWSW 10
++R+T W +
Sbjct: 296 VKRFTAQWGY 305




79|Sequence|391|400|QMWSWSNIKK

>sp|RL2_THEPD|LARGE ribosomal subunit protein uL2|Thermofilum pendens (strain DSM 2475

Query: 1 QMWSWSNIK 9
+MW WS K
Sbjct: 179 KMWHWSRAK 187


>sp|MTXH_METBF|PUTATIVE methyltransferase mtx subunit H|Methanosarcina barkeri (strain

Query: 3 WSWSNIKK 10
W+W N KK
Sbjct: 234 WNWLNKKK 241


>sp|FTHS_PICTO|FORMATE--TETRAHYDROFOLATE ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 MWSWSNIKK 10
MW NIKK
Sbjct: 343 MWHVQNIKK 351


>sp|NAT_SACS2|N-ALPHA-ACETYLTRANSFERASE solfataricus (strain ATCC 35092

Query: 3 WSWSNIKK 10
W +SNIK+
Sbjct: 72 WGFSNIKQ 79


>sp|RNH2_PYRAR|RIBONUCLEASE HII|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 WSWSNIKK 10
WSW + K
Sbjct: 188 WSWETVGK 195


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 1 QMWSWSNI 8
Q W W+++
Sbjct: 771 QRWKWADV 778


>sp|RSMA_PYRHO|PROBABLE ribosomal RNA small subunit|Pyrococcus horikoshii (strain ATCC

Query: 3 WSWSNIK 9
+SW+N+K
Sbjct: 84 YSWNNVK 90


>sp|DPOL_PYRWO|DNA polymerase|Pyrococcus woesei

Query: 4 SWSNIKK 10
SW NIKK
Sbjct: 768 SWLNIKK 774


>sp|DPOL_PYRFU|DNA polymerase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 SWSNIKK 10
SW NIKK
Sbjct: 768 SWLNIKK 774


>sp|NNRE_CENSY|NAD(P)H-HYDRATE epimerase|Cenarchaeum symbiosum (strain A)

Query: 3 WSWSNIKK 10
W+WS ++K
Sbjct: 92 WNWSILEK 99


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 2 MWSW 5
MWSW
Sbjct: 231 MWSW 234


>sp|TYW2_METJA|TRNA(PHE) (4-demethylwyosine(37)-C(7))

Query: 2 MWSWSNIKK 10
MWS NI++
Sbjct: 78 MWSQGNIEE 86


>sp|GLMM_META3|PHOSPHOGLUCOSAMINE mutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 SWSNIKK 10
SW++IKK
Sbjct: 129 SWNSIKK 135


>sp|NAT_SULTO|N-ALPHA-ACETYLTRANSFERASE tokodaii (strain DSM 16993

Query: 3 WSWSNIKK 10
W +SN+K+
Sbjct: 72 WGFSNLKQ 79


>sp|MTXH_METMA|PUTATIVE methyltransferase mtx subunit H|Methanosarcina mazei (strain ATCC

Query: 3 WSWSNIKK 10
W+W N +K
Sbjct: 234 WNWLNRQK 241


>sp|MTXH_METAC|PUTATIVE methyltransferase mtx subunit H|Methanosarcina acetivorans (strain

Query: 3 WSWSNIKK 10
W+W N +K
Sbjct: 234 WNWLNRQK 241


>sp|Y1439_METJA|UNCHARACTERIZED protein MJ1439|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MWSWSN 7
+W+WSN
Sbjct: 201 LWNWSN 206


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 4 SWSNIKK 10
+W NIKK
Sbjct: 1305 AWLNIKK 1311


>sp|Y1631_METJA|UNCHARACTERIZED protein MJ1631|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QMWSW 5
+MWSW
Sbjct: 257 RMWSW 261




80|Sequence|396|405|SNIKKHRQLL

>sp|RECJ1_METJA|EXONUCLEASE RecJ1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SNIKKHRQLL 10
SN++KHR L
Sbjct: 339 SNLRKHRNNL 348




81|Sequence|401|410|HRQLLKSYKI

>sp|SEPS_METBF|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 RQLLKSYK 9
RQ+L SYK
Sbjct: 131 RQVLHSYK 138


>sp|SRP54_METBU|SIGNAL recognition particle 54 kDa|Methanococcoides burtonii (strain DSM

Query: 2 RQLLKSYKI 10
R+LLK YK+
Sbjct: 407 RELLKYYKM 415


>sp|NIFE_METMI|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 3 QLLKSYK 9
QLLK YK
Sbjct: 415 QLLKEYK 421


>sp|NIFE_METMP|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 3 QLLKSYK 9
QLLK YK
Sbjct: 415 QLLKEYK 421




82|Sequence|406|415|KSYKIAYKNK

>sp|Y807_METJA|PUTATIVE lyase MJ0807|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KSYKIAYKNK 10
++Y I YKNK
Sbjct: 152 RTYNIIYKNK 161


>sp|CAS5_HALVD|CRISPR-ASSOCIATED protein Cas5|Haloferax volcanii (strain ATCC 29605

Query: 1 KSYKIAYKN 9
++YK+ Y+N
Sbjct: 106 RTYKLTYQN 114


>sp|Y795_METJA|UNCHARACTERIZED protein MJ0795|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SYKIAYKN 9
+YKI+YKN
Sbjct: 215 NYKISYKN 222


>sp|Y1383_METJA|UNCHARACTERIZED protein MJ1383|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YKIAYKN 9
YK+A+KN
Sbjct: 241 YKVAHKN 247


>sp|RS4E_THEVO|SMALL ribosomal subunit protein eS4|Thermoplasma volcanium (strain ATCC

Query: 1 KSYKIAYKNK 10
+SY++ Y N+
Sbjct: 91 ESYRVVYNNQ 100




83|Sequence|411|420|AYKNKLTQSK

***** No hits found ******


84|Sequence|416|425|LTQSKVSEEI

>sp|RS15_METB6|SMALL ribosomal subunit protein uS15|Methanoregula boonei (strain DSM

Query: 1 LTQSKVSEEI 10
LT++KVS EI
Sbjct: 75 LTENKVSSEI 84


>sp|REG9_PYRAB|UNCHARACTERIZED HTH-type transcriptional regulator PYRAB16920|Pyrococcus abyssi

Query: 1 LTQSKVSEEI 10
LTQ +V+E+I
Sbjct: 81 LTQRQVAEQI 90


>sp|REG9_PYRFU|UNCHARACTERIZED HTH-type transcriptional regulator PF0250|Pyrococcus furiosus

Query: 1 LTQSKVSEEI 10
LTQ +V+E+I
Sbjct: 81 LTQKEVAEQI 90


>sp|REG9_PYRHO|UNCHARACTERIZED HTH-type transcriptional regulator PH1916|Pyrococcus horikoshii

Query: 1 LTQSKVSEEI 10
LTQ +V+E+I
Sbjct: 81 LTQREVAEQI 90




85|Sequence|421|430|VSEEIQKEIQ

>sp|PFDA_THEPD|PREFOLDIN subunit alpha|Thermofilum pendens (strain DSM 2475

Query: 1 VSEEIQKEIQ 10
V+EE+Q+EIQ
Sbjct: 18 VAEELQREIQ 27


>sp|Y923_METJA|UNCHARACTERIZED protein MJ0923|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SEEIQKEI 9
SEE QKEI
Sbjct: 272 SEEEQKEI 279


>sp|RL7A_METJA|LARGE ribosomal subunit protein eL8|Methanocaldococcus jannaschii

Query: 1 VSEEIQKEI 9
V EEIQKE+
Sbjct: 9 VPEEIQKEL 17


>sp|PUR5_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VSEEIQKEIQ 10
VSEE+ KE++
Sbjct: 281 VSEELMKEVK 290


>sp|GUAAA_SACS2|GMP synthase [glutamine-hydrolyzing] subunit A|Saccharolobus

Query: 1 VSEEIQK 7
VSEEIQK
Sbjct: 54 VSEEIQK 60


>sp|SUI1_METTH|PROTEIN translation factor SUI1 homolog|Methanothermobacter

Query: 1 VSEEIQKEIQ 10
V EEI +E+Q
Sbjct: 15 VCEEIAREVQ 24


>sp|SUI1_METST|PROTEIN translation factor SUI1 homolog|Methanosphaera stadtmanae (strain

Query: 1 VSEEIQKEIQ 10
V EEI +E+Q
Sbjct: 15 VCEEIAREVQ 24


>sp|SYS2_METMP|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VSEEIQKEI 9
VSEE QK+I
Sbjct: 15 VSEETQKDI 23




86|Sequence|426|435|QKEIQDLEKT

>sp|CAS1B_METHJ|PUTATIVE CRISPR-associated endonuclease Cas1 2|Methanospirillum hungatei

Query: 2 KEIQDLEKT 10
KEIQ+L+KT
Sbjct: 79 KEIQNLQKT 87


>sp|PURO_METAR|IMP cyclohydrolase|Methanocella arvoryzae (strain DSM 22066

Query: 2 KEIQDLEKT 10
K+++DLEK+
Sbjct: 45 KDVKDLEKS 53


>sp|RAD50_PYRFU|DNA double-strand break repair Rad50|Pyrococcus furiosus (strain ATCC

Query: 1 QKEIQDLEKT 10
+KEI+DLEK
Sbjct: 713 KKEIKDLEKA 722


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 QKEIQDLEKT 10
+KE+ LEKT
Sbjct: 533 EKEVATLEKT 542


>sp|LEUC2_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus furiosus (strain ATCC

Query: 1 QKEIQDLEK 9
QKEI+D K
Sbjct: 67 QKEIRDFAK 75


>sp|DADD_METST|5'-DEOXYADENOSINE deaminase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 QKEIQDLEK 9
Q+E+ DLEK
Sbjct: 215 QQEVNDLEK 223


>sp|DNAG_METTH|DNA primase DnaG|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 KEIQDLEK 9
KE++DLEK
Sbjct: 249 KEVEDLEK 256


>sp|DNAG_METS3|DNA primase DnaG|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 KEIQDLEK 9
KE++DLEK
Sbjct: 250 KEVEDLEK 257


>sp|Y821_METMA|UPF0292 protein MM_0821|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QKEIQDLE 8
QKEI+D+E
Sbjct: 114 QKEIKDIE 121


>sp|ATGT_THEAC|TRNA-GUANINE(15) transglycosylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KEIQDLEK 9
KEI+DL+K
Sbjct: 280 KEIRDLDK 287


>sp|Y4098_METAC|UPF0292 protein MA_4098|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QKEIQDLE 8
QKEI+D+E
Sbjct: 114 QKEIKDVE 121


>sp|Y484_METBF|UPF0292 protein Mbar_A0484|Methanosarcina barkeri (strain Fusaro /

Query: 1 QKEIQDLE 8
QKEI+D+E
Sbjct: 114 QKEIKDVE 121




87|Sequence|431|440|DLEKTLDVFN

>sp|ILVD_METS3|DIHYDROXY-ACID dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DLEKTLDVFN 10
D+E TLD+F+
Sbjct: 283 DVEVTLDLFD 292


>sp|Y572_METJA|UNCHARACTERIZED protein MJ0572|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DLEKTLDVFN 10
D+EK L+ FN
Sbjct: 23 DVEKALEYFN 32


>sp|Y359_METJA|UNCHARACTERIZED protein MJ0359|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DLEKTLDVF 9
DLEKT+D F
Sbjct: 193 DLEKTIDKF 201


>sp|PANE_PYRAB|2-DEHYDROPANTOATE 2-reductase|Pyrococcus abyssi (strain GE5 /

Query: 2 LEKTLDVFN 10
+EK DVFN
Sbjct: 152 IEKVADVFN 160


>sp|GSA_METMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DLEKTLDVFN 10
D+EKTL+ ++
Sbjct: 412 DIEKTLEAYS 421


>sp|RL4_METJA|LARGE ribosomal subunit protein uL4|Methanocaldococcus jannaschii (strain

Query: 1 DLEKTLDVF 9
+L+KT DVF
Sbjct: 147 ELQKTKDVF 155


>sp|GSA_METAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DLEKTLDVF 9
D+EKTL+ +
Sbjct: 412 DIEKTLEAY 420


>sp|SYH_METVS|HISTIDINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 DLEKTLDVFN 10
D EK+LD N
Sbjct: 233 DFEKSLDALN 242


>sp|TBP_PYRHO|TATA-BOX-BINDING protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DLEKTLDV 8
DLEK LD+
Sbjct: 25 DLEKVLDI 32


>sp|ARLY_METBU|ARGININOSUCCINATE lyase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DLEKTLDVF 9
DLE+T+D +
Sbjct: 178 DLERTMDCY 186


>sp|TBP_PYRAB|TATA-BOX-BINDING protein|Pyrococcus abyssi (strain GE5 /

Query: 1 DLEKTLDV 8
DLEK LD+
Sbjct: 25 DLEKVLDI 32


>sp|IF6_ARCFU|TRANSLATION initiation factor 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DLEKTLDVF 9
+LEK+LDV
Sbjct: 78 ELEKSLDVL 86


>sp|PURA_METMP|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LEKTLDVFN 10
LE+T+DV N
Sbjct: 329 LEQTIDVRN 337


>sp|Y101_ARCFU|UNCHARACTERIZED protein AF_0101|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EKTLDVFN 10
EKT+D+ N
Sbjct: 104 EKTIDIIN 111


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LEKTLDVFN 10
+EK L+VFN
Sbjct: 333 VEKGLEVFN 341


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DLEKTLDVF 9
+LEK LDV+
Sbjct: 132 ELEKLLDVW 140


>sp|AATB_SACI7|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 DLEKTLDV 8
D+E TLD+
Sbjct: 424 DIETTLDI 431


>sp|AATB_SACI6|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.4 /

Query: 1 DLEKTLDV 8
D+E TLD+
Sbjct: 424 DIETTLDI 431


>sp|AATB_SACI4|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DLEKTLDV 8
D+E TLD+
Sbjct: 424 DIETTLDI 431


>sp|AATB_SACI3|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.27)

Query: 1 DLEKTLDV 8
D+E TLD+
Sbjct: 424 DIETTLDI 431


>sp|AATB_SACI2|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 DLEKTLDV 8
D+E TLD+
Sbjct: 424 DIETTLDI 431


>sp|AATB_SACI1|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 DLEKTLDV 8
D+E TLD+
Sbjct: 424 DIETTLDI 431


>sp|Y1470_METJA|UNCHARACTERIZED protein MJ1470|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EKTLDVFN 10
EKT D+FN
Sbjct: 89 EKTFDLFN 96


>sp|NADE_PYRAE|NH(3)-DEPENDENT NAD(+) synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DLEKTLDVFN 10
DL+ LDV N
Sbjct: 75 DLKDALDVIN 84


>sp|AATB_SULAC|A-TYPE ATP synthase subunit B|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DLEKTLDV 8
D+E TLD+
Sbjct: 427 DIETTLDI 434


>sp|AATB_METS5|A-TYPE ATP synthase subunit B|Metallosphaera sedula (strain ATCC 51363

Query: 1 DLEKTLDV 8
D+E TLD+
Sbjct: 427 DIETTLDI 434


>sp|CMR3_PYRFU|CRISPR system Cmr subunit Cmr3|Pyrococcus furiosus (strain ATCC 43587

Query: 3 EKTLDVFN 10
+KT D+FN
Sbjct: 210 DKTPDIFN 217


>sp|Y304_ARCFU|UNCHARACTERIZED protein AF_0304|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DLEKTLDVF 9
DLEK ++VF
Sbjct: 335 DLEKPIEVF 343


>sp|TBP_PYRWO|TATA-BOX-BINDING protein|Pyrococcus woesei

Query: 1 DLEKTLDV 8
DLEK LD+
Sbjct: 25 DLEKVLDL 32


>sp|TBP_PYRFU|TATA-BOX-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DLEKTLDV 8
DLEK LD+
Sbjct: 25 DLEKVLDL 32


>sp|Y1355_METJA|UNCHARACTERIZED protein MJ1355|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DLEKTLDVF 9
DLEK D+F
Sbjct: 68 DLEKIPDIF 76




88|Sequence|436|445|LDVFNIILAR

>sp|GATD_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 1 LDVFNIILAR 10
LDV NI+ AR
Sbjct: 136 LDVINIVDAR 145


>sp|ADEC_METAC|ADENINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LDVFNIILA 9
LD+FN+I A
Sbjct: 269 LDIFNLIRA 277


>sp|ADEC_METBF|ADENINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LDVFNIILA 9
LD++N+I A
Sbjct: 269 LDIYNLIRA 277




89|Sequence|441|450|IILARQQAQV

***** No hits found ******


90|Sequence|446|455|QQAQVEVIRS

***** No hits found ******


91|Sequence|451|460|EVIRSGQKLR

>sp|DNAJ_HALLT|CHAPERONE protein DnaJ|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 IRSGQKLR 10
IRSGQ LR
Sbjct: 240 IRSGQSLR 247


>sp|PURE_METSM|PROBABLE N5-carboxyaminoimidazole ribonucleotide mutase|Methanobrevibacter

Query: 3 IRSGQKLR 10
IRSG+K R
Sbjct: 232 IRSGKKFR 239


>sp|ATGT_METS3|TRNA-GUANINE(15) transglycosylase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 EVIRSGQKLR 10
EV+R QKLR
Sbjct: 374 EVLRHIQKLR 383


>sp|TRM56_NITMS|TRNA (cytidine(56)-2'-O)-methyltransferase|Nitrosopumilus maritimus

Query: 1 EVIRSGQKL 9
EV+R GQ+L
Sbjct: 4 EVVRIGQRL 12


>sp|TF2B_CALMQ|TRANSCRIPTION initiation factor IIB|Caldivirga maquilingensis (strain ATCC

Query: 2 VIRSGQKLR 10
V +SGQKLR
Sbjct: 36 VDQSGQKLR 44




92|Sequence|456|465|GQKLRKKSAD

***** No hits found ******


93|Sequence|461|470|KKSADTGEKR

>sp|CS12F_MICX1|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f2|Micrarchaeota archaeon (strain

Query: 2 KSADTGEKR 10
K+ADT EKR
Sbjct: 147 KAADTAEKR 155


>sp|RS2_IGNH4|SMALL ribosomal subunit protein uS2|Ignicoccus hospitalis (strain

Query: 3 SADTGEK 9
SA+TGEK
Sbjct: 2 SAETGEK 8


>sp|RFCL_METMJ|REPLICATION factor C large subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 ADTGEKR 10
ADTGE R
Sbjct: 437 ADTGESR 443




94|Sequence|466|475|TGEKRGGWFS

>sp|BPSA_METJA|N(4)-BIS(AMINOPROPYL)SPERMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GEKRGGWF 9
GE+R G+F
Sbjct: 245 GERRAGYF 252


>sp|Y2114_ARCFU|UNCHARACTERIZED protein AF_2114|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 KRGGW 8
KRGGW
Sbjct: 268 KRGGW 272


>sp|IDI2_METKA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanopyrus kandleri (strain AV19 /

Query: 1 TGEKRGGW 8
TG++R GW
Sbjct: 356 TGDRRTGW 363


>sp|MTM1_METJA|TYPE II methyltransferase M.MjaI|Methanocaldococcus jannaschii (strain

Query: 1 TGEKRGGWFS 10
T E+R WFS
Sbjct: 196 TKEERDRWFS 205


>sp|ARLY_PYRCJ|ARGININOSUCCINATE lyase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GEKRGGWF 9
GE+ GGW
Sbjct: 90 GEEAGGWL 97


>sp|Y2205_ARCFU|UNCHARACTERIZED protein AF_2205|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TGEKRGG 7
TGE+RGG
Sbjct: 283 TGEQRGG 289


>sp|ARLY_PYRAE|ARGININOSUCCINATE lyase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GEKRGGW 8
GE+ GGW
Sbjct: 90 GEEIGGW 96


>sp|METXA_METST|HOMOSERINE O-acetyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GEKRGGWFS 10
G+K+ GW++
Sbjct: 68 GDKKPGWWN 76


>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 1 TGEKRGGWFS 10
TGE R W S
Sbjct: 307 TGESRVKWVS 316


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GEKRGGW 8
EK GGW
Sbjct: 548 AEKHGGW 554


>sp|MTHZ_METTF|TYPE II methyltransferase M.MthZI|Methanothermobacter thermautotrophicus

Query: 3 EKRGGWFS 10
E+R WFS
Sbjct: 185 EERNQWFS 192


>sp|Y2171_ARCFU|UNCHARACTERIZED protein AF_2171|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TGEKRGGW 8
T +KRG W
Sbjct: 193 TEDKRGRW 200


>sp|SYP_PYRAB|PROLINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 EKRGGW 8
EKR GW
Sbjct: 327 EKRPGW 332


>sp|Y1353_ARCFU|UNCHARACTERIZED protein AF_1353|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GEKRGGW 8
GE+R GW
Sbjct: 124 GEERHGW 130


>sp|METXA_METMS|HOMOSERINE O-acetyltransferase|Methanohalophilus mahii (strain ATCC 35705

Query: 2 GEKRGGWF 9
G+K+ GW+
Sbjct: 67 GDKKPGWW 74


>sp|KAD6_METMA|PUTATIVE adenylate kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 EKRGGW 8
EKR GW
Sbjct: 21 EKRRGW 26




95|Sequence|471|480|GGWFSGLWGK

>sp|G6PI_HALMA|PROBABLE glucose-6-phosphate isomerase|Haloarcula marismortui (strain ATCC

Query: 1 GGWFSGLWGK 10
G WF+ LW +
Sbjct: 263 GEWFAQLWAE 272


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WFSGLWG 9
W +G WG
Sbjct: 157 WMNGTWG 163


>sp|SPEE_SULTO|POLYAMINE aminopropyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 FSGLWG 9
F GLWG
Sbjct: 226 FDGLWG 231


>sp|SPEE_SULAC|POLYAMINE aminopropyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 FSGLWG 9
F GLWG
Sbjct: 228 FDGLWG 233


>sp|G6PI_HALWD|PROBABLE glucose-6-phosphate isomerase|Haloquadratum walsbyi (strain DSM

Query: 3 WFSGLWGK 10
WF+ LW +
Sbjct: 264 WFAQLWAE 271


>sp|G6PI_HALSA|PROBABLE glucose-6-phosphate isomerase|Halobacterium salinarum (strain ATCC

Query: 3 WFSGLWGK 10
WF+ LW +
Sbjct: 265 WFAQLWAE 272


>sp|Y1375_METJA|UNCHARACTERIZED membrane protein MJ1375|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GGWFSGLWG 9
GG++SG++G
Sbjct: 250 GGFWSGIYG 258


>sp|G6PI_NATPD|PROBABLE glucose-6-phosphate isomerase|Natronomonas pharaonis (strain ATCC

Query: 3 WFSGLWGK 10
WF+ LW +
Sbjct: 262 WFAQLWAE 269


>sp|SURE_ARCFU|5'-NUCLEOTIDASE SurE|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GWFSGL 7
GWF GL
Sbjct: 252 GWFDGL 257


>sp|MTHZ_METTF|TYPE II methyltransferase M.MthZI|Methanothermobacter thermautotrophicus

Query: 3 WFSGLW 8
WFS +W
Sbjct: 190 WFSDVW 195


>sp|MTM1_METJA|TYPE II methyltransferase M.MjaI|Methanocaldococcus jannaschii (strain

Query: 3 WFSGLW 8
WFS +W
Sbjct: 203 WFSQIW 208


>sp|SPEE_SACS2|POLYAMINE aminopropyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 4 FSGLWG 9
F GLWG
Sbjct: 229 FDGLWG 234


>sp|GLMS_METMP|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanococcus maripaludis (strain

Query: 3 WFSGL 7
WFSGL
Sbjct: 314 WFSGL 318


>sp|G6PI_METMP|PROBABLE glucose-6-phosphate isomerase|Methanococcus maripaludis (strain DSM

Query: 1 GGWFSGLWGK 10
G W+ LW +
Sbjct: 271 GMWYGQLWAE 280


>sp|SPEE_SACI7|POLYAMINE aminopropyltransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 FSGLWG 9
F GLWG
Sbjct: 229 FDGLWG 234


>sp|SPEE_SACI6|POLYAMINE aminopropyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 FSGLWG 9
F GLWG
Sbjct: 229 FDGLWG 234


>sp|SPEE_SACI4|POLYAMINE aminopropyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 FSGLWG 9
F GLWG
Sbjct: 229 FDGLWG 234


>sp|SPEE_SACI3|POLYAMINE aminopropyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 4 FSGLWG 9
F GLWG
Sbjct: 229 FDGLWG 234


>sp|SPEE_SACI2|POLYAMINE aminopropyltransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 FSGLWG 9
F GLWG
Sbjct: 229 FDGLWG 234


>sp|SPEE_SACI1|POLYAMINE aminopropyltransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 FSGLWG 9
F GLWG
Sbjct: 229 FDGLWG 234


>sp|TFE_NATPD|TRANSCRIPTION factor E|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GWFSGLW 8
GW + LW
Sbjct: 76 GWLTYLW 82


>sp|TFE_METTP|TRANSCRIPTION factor E|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GWFSGLW 8
GW + LW
Sbjct: 73 GWLTYLW 79


>sp|TFE_METMJ|TRANSCRIPTION factor E|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GWFSGLW 8
GW + LW
Sbjct: 78 GWLTYLW 84


>sp|TFE_METMA|TRANSCRIPTION factor E|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GWFSGLW 8
GW + LW
Sbjct: 73 GWLTYLW 79


>sp|TFE_METLZ|TRANSCRIPTION factor E|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 GWFSGLW 8
GW + LW
Sbjct: 116 GWLTYLW 122


>sp|TFE_METHJ|TRANSCRIPTION factor E|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GWFSGLW 8
GW + LW
Sbjct: 78 GWLTYLW 84


>sp|TFE_METBU|TRANSCRIPTION factor E|Methanococcoides burtonii (strain DSM 6242

Query: 2 GWFSGLW 8
GW + LW
Sbjct: 73 GWLTYLW 79


>sp|TFE_METBF|TRANSCRIPTION factor E|Methanosarcina barkeri (strain Fusaro /

Query: 2 GWFSGLW 8
GW + LW
Sbjct: 73 GWLTYLW 79


>sp|TFE_METB6|TRANSCRIPTION factor E|Methanoregula boonei (strain DSM 21154

Query: 2 GWFSGLW 8
GW + LW
Sbjct: 78 GWLTYLW 84


>sp|TFE_METAR|TRANSCRIPTION factor E|Methanocella arvoryzae (strain DSM 22066

Query: 2 GWFSGLW 8
GW + LW
Sbjct: 77 GWLTYLW 83


>sp|TFE_METAC|TRANSCRIPTION factor E|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GWFSGLW 8
GW + LW
Sbjct: 76 GWLTYLW 82


>sp|TFE_HALWD|TRANSCRIPTION factor E|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GWFSGLW 8
GW + LW
Sbjct: 76 GWLTYLW 82


>sp|TFE_HALSA|TRANSCRIPTION factor E|Halobacterium salinarum (strain ATCC 700922

Query: 2 GWFSGLW 8
GW + LW
Sbjct: 76 GWLTYLW 82


>sp|TFE_HALMA|TRANSCRIPTION factor E|Haloarcula marismortui (strain ATCC 43049

Query: 2 GWFSGLW 8
GW + LW
Sbjct: 76 GWLTYLW 82


>sp|SPEE2_HYPBU|POLYAMINE aminopropyltransferase 2|Hyperthermus butylicus (strain DSM 5456

Query: 4 FSGLWG 9
++GLWG
Sbjct: 231 YNGLWG 236


>sp|GATA_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Halobacterium salinarum (strain ATCC

Query: 1 GGWFSGLWGK 10
GG F G W +
Sbjct: 281 GGGFDGNWNE 290


>sp|GCST_PYRFU|PROBABLE aminomethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 WFSGLW 8
WF G W
Sbjct: 175 WFQGRW 180




96|Sequence|476|485|GLWGKKESKK

>sp|AATC_METAC|A-TYPE ATP synthase subunit C|Methanosarcina acetivorans (strain ATCC

Query: 2 LWGKKESKK 10
LWGKK S+K
Sbjct: 7 LWGKKPSRK 15


>sp|AATC_METBF|A-TYPE ATP synthase subunit C|Methanosarcina barkeri (strain Fusaro /

Query: 2 LWGKKESKK 10
LWG+K S+K
Sbjct: 7 LWGQKPSRK 15


>sp|MTRC_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanothermobacter

Query: 1 GLWGKKESK 9
GLW K+E +
Sbjct: 259 GLWPKEEEQ 267


>sp|POK_METJA|PANTOATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LWGKKESKK 10
++GKKE+K+
Sbjct: 165 IFGKKETKE 173


>sp|MTRC_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanothermobacter marburgensis

Query: 1 GLWGKKE 7
GLW K+E
Sbjct: 259 GLWPKEE 265




97|Sequence|481|490|KESKKKDEES

***** No hits found ******


98|Sequence|486|495|KDEESLIPET

>sp|RS2_THEAC|SMALL ribosomal subunit protein uS2|Thermoplasma acidophilum (strain

Query: 2 DEESLIPE 9
DEE LIPE
Sbjct: 2 DEEMLIPE 9


>sp|PFDA1_METJA|PREFOLDIN subunit alpha 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DEESLIP 8
DEE+LIP
Sbjct: 52 DEETLIP 58


>sp|AROA_PYRFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 ESLIPET 10
ES+IPET
Sbjct: 381 ESIIPET 387


>sp|ENCP1_PYRFU|FERRITIN-LIKE-ENCAPSULIN shell fusion protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KDEESLI 7
KDEESL+
Sbjct: 198 KDEESLV 204


>sp|Y181_METJA|UNCHARACTERIZED protein MJ0181|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DEESLIPE 9
D E LIPE
Sbjct: 70 DNERLIPE 77




99|Sequence|491|500|LIPETIDDLM

>sp|PELO_ARCFU|PROTEIN pelota homolog|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LIPETIDDL 9
LIPET+DDL
Sbjct: 17 LIPETLDDL 25


>sp|PELO_METST|PROTEIN pelota homolog|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LIPETIDDL 9
++PETIDDL
Sbjct: 15 VVPETIDDL 23


>sp|PELO_METS3|PROTEIN pelota homolog|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LIPETIDDL 9
L+PET+DDL
Sbjct: 15 LVPETLDDL 23


>sp|PELO_METTH|PROTEIN pelota homolog|Methanothermobacter thermautotrophicus (strain

Query: 1 LIPETIDDL 9
L+PET+DDL
Sbjct: 15 LVPETLDDL 23


>sp|PELO_METLZ|PROTEIN pelota homolog|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LIPETIDDL 9
L+PE+IDDL
Sbjct: 19 LMPESIDDL 27


>sp|PELO_METMJ|PROTEIN pelota homolog|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LIPETIDDL 9
L PET+DDL
Sbjct: 17 LFPETLDDL 25


>sp|PELO_NATPD|PROTEIN pelota homolog|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LIPETIDDL 9
L+PET+DDL
Sbjct: 18 LVPETLDDL 26


>sp|PELO_METB6|PROTEIN pelota homolog|Methanoregula boonei (strain DSM 21154

Query: 1 LIPETIDDL 9
L PE+IDDL
Sbjct: 17 LFPESIDDL 25


>sp|PELO_METBU|PROTEIN pelota homolog|Methanococcoides burtonii (strain DSM 6242

Query: 1 LIPETIDDL 9
L PET+DDL
Sbjct: 18 LTPETLDDL 26


>sp|PELO_METMP|PROTEIN pelota homolog|Methanococcus maripaludis (strain DSM 14266

Query: 1 LIPETIDDL 9
LIPE +DDL
Sbjct: 15 LIPENLDDL 23


>sp|PELO_METKA|PROTEIN pelota homolog|Methanopyrus kandleri (strain AV19 /

Query: 1 LIPETIDDL 9
++PET+DDL
Sbjct: 15 VLPETLDDL 23


>sp|PELO_HALWD|PROTEIN pelota homolog|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LIPETIDDL 9
L+PE +DDL
Sbjct: 18 LVPENVDDL 26


>sp|PELO_METM5|PROTEIN pelota homolog|Methanococcus maripaludis (strain C5 /

Query: 1 LIPETIDDL 9
LIPE +DDL
Sbjct: 15 LIPENLDDL 23


>sp|PELO_METM7|PROTEIN pelota homolog|Methanococcus maripaludis (strain C7 /

Query: 1 LIPETIDDL 9
LIPE +DDL
Sbjct: 15 LIPENLDDL 23


>sp|PELO_METM6|PROTEIN pelota homolog|Methanococcus maripaludis (strain C6 /

Query: 1 LIPETIDDL 9
LIPE +DDL
Sbjct: 15 LIPENLDDL 23


>sp|PELO_HALLT|PROTEIN pelota homolog|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 LIPETIDDL 9
L+PE +DDL
Sbjct: 18 LVPENVDDL 26


>sp|RNP2_METLZ|RIBONUCLEASE P protein component 2|Methanocorpusculum labreanum (strain ATCC

Query: 1 LIPETIDD 8
+IPE+IDD
Sbjct: 107 VIPESIDD 114


>sp|PELO_HALSA|PROTEIN pelota homolog|Halobacterium salinarum (strain ATCC 700922

Query: 1 LIPETIDDL 9
L+PE++DDL
Sbjct: 18 LVPESLDDL 26


>sp|PELO_HALS3|PROTEIN pelota homolog|Halobacterium salinarum (strain ATCC 29341

Query: 1 LIPETIDDL 9
L+PE++DDL
Sbjct: 18 LVPESLDDL 26


>sp|PELO_HALMA|PROTEIN pelota homolog|Haloarcula marismortui (strain ATCC 43049

Query: 1 LIPETIDDL 9
++PET+DDL
Sbjct: 18 VVPETLDDL 26


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LIPETIDD 8
LIPET+ D
Sbjct: 810 LIPETVSD 817


>sp|CCA_THEKO|CCA-ADDING enzyme|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IPETIDDLM 10
+PE +DDL+
Sbjct: 305 VPEMVDDLL 313


>sp|PELO_METPE|PROTEIN pelota homolog|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 LIPETIDDL 9
L PE++DD+
Sbjct: 17 LFPESVDDI 25


>sp|PELO_METAR|PROTEIN pelota homolog|Methanocella arvoryzae (strain DSM 22066

Query: 1 LIPETIDDL 9
L PE++DDL
Sbjct: 17 LQPESLDDL 25


>sp|PELO_HYPBU|PROTEIN pelota homolog|Hyperthermus butylicus (strain DSM 5456

Query: 1 LIPETIDDL 9
++PET DD+
Sbjct: 15 VVPETTDDI 23


>sp|POK_METHJ|PANTOATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 IPETIDDLM 10
IP+ +DD+M
Sbjct: 205 IPQNLDDIM 213


>sp|RFCS_HALMA|REPLICATION factor C small subunit|Haloarcula marismortui (strain ATCC 43049

Query: 3 PETIDDLM 10
P+T+DD+M
Sbjct: 22 PQTLDDVM 29


>sp|RFCS_METHJ|REPLICATION factor C small subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PETIDDLM 10
PE IDDL+
Sbjct: 229 PEEIDDLI 236


>sp|PELO_METJA|PROTEIN pelota homolog|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LIPETIDDL 9
L+PE +DDL
Sbjct: 15 LMPENLDDL 23


>sp|PELO_METVS|PROTEIN pelota homolog|Methanococcus vannielii (strain ATCC 35089

Query: 1 LIPETIDDL 9
++PE +DDL
Sbjct: 15 VMPENLDDL 23


>sp|CAS8B_HALVD|CRISPR-ASSOCIATED protein Cas8b|Haloferax volcanii (strain ATCC 29605

Query: 1 LIPETIDDLM 10
L PET+D L+
Sbjct: 650 LFPETVDRLL 659


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 PETIDDLM 10
PE ++DLM
Sbjct: 373 PEVVEDLM 380


>sp|RNH2_METVS|RIBONUCLEASE HII|Methanococcus vannielii (strain ATCC 35089

Query: 1 LIPETIDDLM 10
L PE ID+ M
Sbjct: 89 LAPEKIDEYM 98


>sp|RS15_METB6|SMALL ribosomal subunit protein uS15|Methanoregula boonei (strain DSM

Query: 2 IPETIDDLM 10
IPE + DLM
Sbjct: 84 IPEDLRDLM 92


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IPETIDDL 9
+P T+DDL
Sbjct: 343 LPPTLDDL 350


>sp|UBIX_SACS2|FLAVIN prenyltransferase UbiX|Saccharolobus solfataricus (strain ATCC

Query: 1 LIPETIDDLM 10
++P+ IDD++
Sbjct: 169 ILPKNIDDMI 178


>sp|TF2B_PYROC|TRANSCRIPTION initiation factor IIB|Pyrodictium occultum

Query: 2 IPETIDDL 9
IP +IDD+
Sbjct: 180 IPRSIDDI 187


>sp|GATE_METHJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanospirillum hungatei JF-1 (strain

Query: 2 IPETIDD 8
IPE IDD
Sbjct: 437 IPEMIDD 443


>sp|PYRH_THEPD|URIDYLATE kinase|Thermofilum pendens (strain DSM 2475

Query: 1 LIPETIDDL 9
LIPET+ D+
Sbjct: 98 LIPETLLDV 106


>sp|AROB_THEAC|3-DEHYDROQUINATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PETIDDLM 10
PE ID++M
Sbjct: 282 PEVIDEIM 289


>sp|PELO_META3|PROTEIN pelota homolog|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LIPETIDDL 9
++PE +DDL
Sbjct: 15 VMPENLDDL 23


>sp|PELO_METHJ|PROTEIN pelota homolog|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LIPETIDDL 9
L PE DDL
Sbjct: 17 LFPENSDDL 25


>sp|TRPD_METM6|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 2 IPETIDD 8
IPET DD
Sbjct: 122 IPETPDD 128


>sp|CMR6_PYRFU|CRISPR system Cmr subunit Cmr6|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IPETIDDLM 10
+PE ID+L+
Sbjct: 216 VPEIIDELI 224


>sp|NADM_HALLT|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 LIPETIDDLM 10
L+PET+ D++
Sbjct: 142 LVPETVVDVI 151


>sp|PELO_NITMS|PROTEIN pelota homolog|Nitrosopumilus maritimus (strain SCM1)

Query: 1 LIPETIDDLM 10
+IPE DDL+
Sbjct: 13 VIPEDSDDLL 22


>sp|TRPD_METMP|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 2 IPETIDD 8
IPET DD
Sbjct: 122 IPETPDD 128


>sp|EF2_NATPD|ELONGATION factor 2|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LIPETIDDL 9
L PETID++
Sbjct: 704 LQPETIDEI 712


>sp|TRM56_THEVO|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermoplasma volcanium

Query: 2 IPETIDDLM 10
+PETI++++
Sbjct: 277 VPETIEEMI 285


>sp|UBIX_PYRHO|FLAVIN prenyltransferase UbiX|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PETIDDLM 10
P+TIDD++
Sbjct: 147 PKTIDDMV 154


>sp|RADA_HALWD|DNA repair and recombination protein|Haloquadratum walsbyi (strain DSM

Query: 3 PETIDDLM 10
PE IDD++
Sbjct: 148 PERIDDML 155


>sp|RL10_THEGJ|LARGE ribosomal subunit protein uL10|Thermococcus gammatolerans (strain

Query: 1 LIPETIDDLM 10
+ PET++D++
Sbjct: 259 ITPETVEDIL 268


>sp|RPO4_METJA|DNA-DIRECTED RNA polymerase subunit Rpo4|Methanocaldococcus jannaschii (strain

Query: 1 LIPETIDDL 9
++PE +DDL
Sbjct: 83 ILPEDLDDL 91


>sp|COBQ_METAR|PROBABLE cobyric acid synthase|Methanocella arvoryzae (strain DSM 22066

Query: 2 IPETIDDL 9
+PETID L
Sbjct: 347 MPETIDGL 354


>sp|RADA_HALSA|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 3 PETIDDLM 10
PE IDD++
Sbjct: 148 PERIDDMV 155


>sp|RADA_HALS3|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 3 PETIDDLM 10
PE IDD++
Sbjct: 148 PERIDDMV 155


>sp|NADM_HALMA|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 2 IPETIDDL 9
+PE++DDL
Sbjct: 179 LPESLDDL 186


>sp|G3P_METMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LIPETID 7
++PET+D
Sbjct: 304 VVPETVD 310


>sp|Y977_METKA|UNCHARACTERIZED glycosyltransferase MK0977|Methanopyrus kandleri (strain AV19 /

Query: 1 LIPETIDD 8
LIP+T DD
Sbjct: 138 LIPDTYDD 145


>sp|IF6_PYRAR|TRANSLATION initiation factor 6|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 IPETIDDLM 10
+PE IDD++
Sbjct: 32 VPEKIDDIV 40


>sp|RFCS_NATPD|REPLICATION factor C small subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PETIDDLM 10
P+T+DD++
Sbjct: 20 PQTLDDIV 27




100|Sequence|496|505|IDDLMTPEEK

>sp|THIL_PYRHO|THIAMINE-MONOPHOSPHATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IDDLMTPEE 9
+ D MTPEE
Sbjct: 49 VPDFMTPEE 57


>sp|ASSY_METVA|ARGININOSUCCINATE synthase|Methanococcus vannielii

Query: 2 DDLMTPEEK 10
DDL PEEK
Sbjct: 43 DDLKEPEEK 51


>sp|COFD_METB6|2-PHOSPHO-L-LACTATE transferase|Methanoregula boonei (strain DSM 21154

Query: 1 IDDLMTPEEK 10
+D LMT EEK
Sbjct: 276 LDTLMTGEEK 285


>sp|ASSY_METMP|ARGININOSUCCINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 DDLMTPEEK 10
DDL PEEK
Sbjct: 43 DDLKEPEEK 51


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 DDLMTPEEK 10
D L TPEE+
Sbjct: 730 DPLFTPEER 738


>sp|HCP_METVS|HYDROXYLAMINE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 2 DDLMTPEE 9
DDL +PEE
Sbjct: 182 DDLKSPEE 189


>sp|SYT_THEPD|THREONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 DDLMTPEE 9
DDL PEE
Sbjct: 84 DDLADPEE 91


>sp|IF2G_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 DLMTPEE 9
DL+TPEE
Sbjct: 148 DLVTPEE 154


>sp|SYC_PYRNV|CYSTEINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 DDLMTPE 8
DD+ TPE
Sbjct: 363 DDMSTPE 369


>sp|COFC_METAR|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 4 LMTPEEK 10
L+TPEE+
Sbjct: 19 LLTPEER 25


>sp|RNZ_METTH|RIBONUCLEASE Z|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 DDLMTPEEK 10
DDLMT E K
Sbjct: 291 DDLMTVEVK 299


>sp|SYC_PYRIL|CYSTEINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 DDLMTPE 8
DD+ TPE
Sbjct: 363 DDMSTPE 369


>sp|SYFB_META3|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 DDLMTPEE 9
++LMTP+E
Sbjct: 169 NELMTPKE 176


>sp|FRHA_METJA|COENZYME F420 hydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 1 IDDLMTPEE 9
IDD + P+E
Sbjct: 119 IDDFLKPDE 127




101|Sequence|501|510|TPEEKDKLFT

>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TPEEKDKLF 9
TP EKDKL+
Sbjct: 434 TPIEKDKLY 442


>sp|MDH_PYRCJ|MALATE dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 TPEEKDKL 8
TPEEK+K
Sbjct: 282 TPEEKEKF 289


>sp|AATA3_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 TPEEKDKLF 9
+PEE+D LF
Sbjct: 563 SPEEEDPLF 571


>sp|AROA_METBU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcoides burtonii (strain DSM

Query: 1 TPEEKDKL 8
T EEKDKL
Sbjct: 355 TSEEKDKL 362


>sp|LYSZ_PYRAE|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum aerophilum

Query: 1 TPEEKDKL 8
TPEE +KL
Sbjct: 201 TPEEAEKL 208


>sp|Y900_METJA|UNCHARACTERIZED protein MJ0900|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TPEEKDKLF 9
TPEE+DK
Sbjct: 152 TPEERDKFL 160


>sp|DAPAL_HALSA|UNCHARACTERIZED DapA-like lyase VNG_0444G|Halobacterium salinarum (strain ATCC

Query: 1 TPEEKDKLFT 10
TP E+D++ T
Sbjct: 66 TPSERDRVVT 75


>sp|DAPAL_HALS3|UNCHARACTERIZED DapA-like lyase OE_1665R|Halobacterium salinarum (strain ATCC

Query: 1 TPEEKDKLFT 10
TP E+D++ T
Sbjct: 66 TPSERDRVVT 75


>sp|RISC_METTM|RIBOFLAVIN synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 PEEKDKL 8
PEEKDK+
Sbjct: 68 PEEKDKV 74


>sp|Y237_THEAC|MEMO1 family protein Ta0237|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PEEKDKLFT 10
PE KD+L++
Sbjct: 13 PERKDELYS 21


>sp|RISC_METTH|RIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 PEEKDKL 8
PEEKDK+
Sbjct: 68 PEEKDKV 74


>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 TPEEKDKLF 9
TP+E+DK F
Sbjct: 413 TPQEEDKSF 421


>sp|LONB_METTH|ARCHAEAL Lon protease|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 TPEEKDKL 8
TPE +DKL
Sbjct: 329 TPENRDKL 336


>sp|Y4659_METAC|UPF0201 protein MA_4659|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TPEEKDKLF 9
+PEE +KLF
Sbjct: 132 SPEEMEKLF 140


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 EEKDKLFT 10
EEKDKL++
Sbjct: 553 EEKDKLYS 560


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PEEKDKLFT 10
PEEKD FT
Sbjct: 365 PEEKDTNFT 373


Query: 4 EKDKLF 9
EKDKLF
Sbjct: 128 EKDKLF 133


>sp|GATD_THEPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermofilum pendens (strain DSM 2475

Query: 2 PEEKDKLFT 10
PEE +LFT
Sbjct: 422 PEEIQRLFT 430


>sp|RPO10_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo10|Thermoplasma acidophilum (strain

Query: 1 TPEEKDKLF 9
+PEE +K+F
Sbjct: 36 SPEEIEKIF 44


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 PEEKDKLFT 10
PEEKD FT
Sbjct: 365 PEEKDMNFT 373


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PEEKDKLFT 10
PEEKD FT
Sbjct: 365 PEEKDTNFT 373


>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PEEKDKLFT 10
PEEKD FT
Sbjct: 365 PEEKDTNFT 373


>sp|IF6_METLZ|TRANSLATION initiation factor 6|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 TPEEKDKL 8
TPEE +KL
Sbjct: 160 TPEEIEKL 167


>sp|TF2B1_SACS2|TRANSCRIPTION initiation factor IIB 1|Saccharolobus solfataricus (strain ATCC

Query: 1 TPEEKDK 7
TPEEK+K
Sbjct: 53 TPEEKEK 59


>sp|DHQS_NITMS|3-DEHYDROQUINATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 TPEEKDKLFT 10
TPEE K+F+
Sbjct: 132 TPEEVRKMFS 141


>sp|TF2B_SACSH|TRANSCRIPTION initiation factor IIB|Saccharolobus shibatae (strain ATCC 51178

Query: 1 TPEEKDK 7
TPEEK+K
Sbjct: 50 TPEEKEK 56


>sp|Y096_METJA|UNCHARACTERIZED protein MJ0096|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TPEEKDKLF 9
T EEK++LF
Sbjct: 124 TLEEKEELF 132


>sp|PRIL_THEKO|DNA primase large subunit PriL|Thermococcus kodakarensis (strain ATCC

Query: 1 TPEEKDKL 8
+PEEK+KL
Sbjct: 137 SPEEKEKL 144


>sp|VHCA_METVO|F420-NON-REDUCING hydrogenase vhc subunit A|Methanococcus voltae

Query: 1 TPEEKDKLFT 10
T EE+D+L T
Sbjct: 177 TEEERDELLT 186


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PEEKDKLFT 10
P E++K+FT
Sbjct: 26 PSEREKVFT 34


>sp|LONB_THEVO|ARCHAEAL Lon protease|Thermoplasma volcanium (strain ATCC 51530

Query: 4 EKDKLF 9
EKDKLF
Sbjct: 621 EKDKLF 626


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 PEEKDKLFT 10
PE+KD FT
Sbjct: 370 PEQKDMSFT 378


>sp|TF2B_SULTO|TRANSCRIPTION initiation factor IIB|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TPEEKDK 7
TPEEK+K
Sbjct: 52 TPEEKEK 58


>sp|RNH2_THEKO|RIBONUCLEASE HII|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 TPEEKDKLFT 10
TP+ ++KLF
Sbjct: 45 TPKRREKLFN 54


>sp|SYM_SULTO|METHIONINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PEEKDKLFT 10
PEE+D FT
Sbjct: 365 PEERDTNFT 373


>sp|DHE2_HALSI|NAD-SPECIFIC glutamate dehydrogenase A|Halobacterium salinarum (Halobacterium

Query: 1 TPEEKDKL 8
+PEEK++L
Sbjct: 137 SPEEKERL 144


>sp|TF2B_SULAC|TRANSCRIPTION initiation factor IIB|Sulfolobus acidocaldarius (strain ATCC

Query: 1 TPEEKDK 7
TPEEK+K
Sbjct: 51 TPEEKEK 57


>sp|G3P_META3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 PEEKDKLFT 10
PE KDK+ T
Sbjct: 204 PEFKDKIIT 212


>sp|CAS6_PYRFU|CRISPR-ASSOCIATED endoribonuclease Cas6|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TPEEKDKLF 9
PE+KD+ F
Sbjct: 8 VPEDKDRAF 16


>sp|SYM_IGNH4|METHIONINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 PEEKDKLFT 10
PEE+D FT
Sbjct: 364 PEERDTNFT 372


>sp|SELD_METMP|SELENIDE, water dikinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 PEEKDKLF 9
PE KDKL
Sbjct: 293 PEYKDKLI 300


>sp|GATE_HALMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Haloarcula marismortui (strain ATCC

Query: 2 PEEKDKLFT 10
PEE D+ FT
Sbjct: 38 PEESDRSFT 46




102|Sequence|506|515|DKLFTAIGYS

>sp|CBIHC_ARCFU|COBALAMIN biosynthesis protein CbiHC|Archaeoglobus fulgidus (strain ATCC

Query: 2 KLFTAIGYS 10
K+FT GYS
Sbjct: 236 KMFTPRGYS 244


>sp|TRM1_METJA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocaldococcus

Query: 1 DKLFTAIGY 9
DK+F +GY
Sbjct: 235 DKVFEMLGY 243


>sp|THII_DESA1|TRNA sulfurtransferase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 DKLFTAIGYS 10
DK+ T +GY+
Sbjct: 268 DKIATELGYN 277


>sp|TFE_CALMQ|TRANSCRIPTION factor E|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 DKLFTAIGYS 10
DKL + +GY+
Sbjct: 46 DKLTSIVGYN 55




103|Sequence|511|520|AIGYSESTHN

>sp|SYR_THESM|ARGININE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 IGYSESTHN 10
+GY E HN
Sbjct: 416 LGYEEEYHN 424


>sp|Y1786_ARCFU|UNCHARACTERIZED protein AF_1786|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AIGYSESTHN 10
AIG+S TH+
Sbjct: 48 AIGHSRYTHS 57


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 AIGYSESTHN 10
++GY +S H+
Sbjct: 502 SLGYEDSVHD 511


>sp|PGMI_AERPE|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Aeropyrum pernix (strain

Query: 4 YSESTHN 10
Y ES+HN
Sbjct: 222 YPESSHN 228


>sp|NRPR_METMP|GLOBAL nitrogen regulator NrpR|Methanococcus maripaludis (strain DSM 14266

Query: 1 AIGYSESTH 9
+I YSE TH
Sbjct: 524 SIDYSELTH 532


>sp|RS7_METMP|SMALL ribosomal subunit protein uS7|Methanococcus maripaludis (strain DSM

Query: 1 AIGYSESTH 9
A+G SES H
Sbjct: 138 ALGASESAH 146




104|Sequence|516|525|ESTHNLTLPK

>sp|CAPPA_PICTO|PHOSPHOENOLPYRUVATE carboxylase|Picrophilus torridus (strain ATCC 700027

Query: 2 STHNLTLPK 10
ST N+TLP+
Sbjct: 368 STGNVTLPR 376


>sp|PSTB_METHJ|PHOSPHATE import ATP-binding protein PstB|Methanospirillum hungatei JF-1

Query: 4 HNLTLP 9
HN+TLP
Sbjct: 23 HNVTLP 28


>sp|SYE_METB6|GLUTAMATE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 ESTHNLTLPK 10
ES H+ LPK
Sbjct: 499 ESVHSDNLPK 508




105|Sequence|521|530|LTLPKQYVAH

>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 TLPKQYVAH 10
+LPK Y AH
Sbjct: 146 SLPKAYEAH 154


>sp|SYDND_METKA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 LTLPKQYV 8
LTLPKQ V
Sbjct: 48 LTLPKQKV 55


>sp|Y513_METJA|UNCHARACTERIZED protein MJ0513|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PKQYVAH 10
PK+Y+ H
Sbjct: 202 PKEYIVH 208


>sp|ADPRH_METOA|PROTEIN-ADP-RIBOSE hydrolase|Methanobrevibacter oralis

Query: 3 LPKQYVAH 10
LP +YV H
Sbjct: 155 LPSKYVVH 162


>sp|FLAI_SULAC|ARCHAEAL flagellar ATPase motor FlaI|Sulfolobus acidocaldarius (strain ATCC

Query: 1 LTLPKQYVAH 10
L++PK+YV +
Sbjct: 109 LSVPKEYVIY 118


>sp|SOR_ACIAM|SULFUR oxygenase/reductase|Acidianus ambivalens (Desulfurolobus

Query: 4 PKQYVAH 10
P+QY+ H
Sbjct: 245 PQQYIVH 251


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 3 LPKQYVAH 10
LP+ YV H
Sbjct: 78 LPESYVEH 85


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 LPKQYVAH 10
LP+ YV H
Sbjct: 78 LPESYVEH 85


>sp|HTPX2_SULAC|PROTEASE HtpX homolog 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LTLPKQYVA 9
+++PK YVA
Sbjct: 87 MSMPKVYVA 95


>sp|RL3_METPE|LARGE ribosomal subunit protein uL3|Methanosphaerula palustris (strain

Query: 1 LTLPKQY 7
+TLPK+Y
Sbjct: 114 ITLPKKY 120




106|Sequence|526|535|QYVAHIMTLK

>sp|Y643_PYRHO|UNCHARACTERIZED protein PH0643|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QYVAHIMTLK 10
+Y++HIMTL+
Sbjct: 177 EYISHIMTLE 186


>sp|ARLY_ARCFU|ARGININOSUCCINATE lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VAHIMTLK 10
VAH++TLK
Sbjct: 37 VAHVLTLK 44


>sp|RS17E_METKA|SMALL ribosomal subunit protein eS17|Methanopyrus kandleri (strain AV19

Query: 2 YVAHIMTLK 10
YV H+M LK
Sbjct: 53 YVTHLMRLK 61


>sp|FLA1_PYRHO|PROBABLE flagellin PH0546|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YVAHIMTLK 10
Y AH+M L+
Sbjct: 229 YTAHVMELQ 237


>sp|Y1397_PYRAB|UNCHARACTERIZED protein PYRAB13970|Pyrococcus abyssi (strain GE5 /

Query: 1 QYVAHIMTLK 10
+Y++ IMTL+
Sbjct: 172 EYISSIMTLE 181


>sp|Y1656_METJA|UNCHARACTERIZED protein MJ1656|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QYVAHIMTL 9
++VA IMTL
Sbjct: 188 EFVASIMTL 196


>sp|KUP_METBF|PROBABLE potassium transport system protein|Methanosarcina barkeri (strain

Query: 1 QYVAHIM 7
QY++H+M
Sbjct: 485 QYISHVM 491




107|Sequence|531|540|IMTLKLVSTS

***** No hits found ******


108|Sequence|536|545|LVSTSVTIRE

>sp|SYG_METM6|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 LVSTSVTIRE 10
LV SVTIRE
Sbjct: 543 LVDNSVTIRE 552


>sp|SYG_METM5|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 LVSTSVTIRE 10
L +SVTIRE
Sbjct: 543 LTDSSVTIRE 552


>sp|SYG_METM7|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 LVSTSVTIRE 10
L SVTIRE
Sbjct: 543 LTDRSVTIRE 552




109|Sequence|541|550|VTIRENKNIP

>sp|FAU1_CALMQ|PROBABLE ribonuclease FAU-1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 VTIRENKNIP 10
VTI++++NIP
Sbjct: 47 VTIKDDENIP 56


>sp|Y200_PYRAB|UPF0056 membrane protein PYRAB02000|Pyrococcus abyssi (strain GE5 /

Query: 1 VTIRENKNI 9
VTI++ KNI
Sbjct: 96 VTIKKEKNI 104


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 IRENKNIP 10
I EN+N+P
Sbjct: 201 IEENENLP 208


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 3 IRENKNIP 10
I EN+N+P
Sbjct: 208 IEENENLP 215


>sp|AMZA_HALWD|ARCHAEMETZINCIN walsbyi (strain DSM 16790

Query: 1 VTIRENKNIP 10
VT+ E ++IP
Sbjct: 31 VTVHEEQSIP 40


>sp|Y214_PYRHO|UPF0056 membrane protein PH0214|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VTIRENKNI 9
VTI+ KNI
Sbjct: 96 VTIKREKNI 104


>sp|THII_ARCFU|PROBABLE tRNA sulfurtransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TIRENKNIP 10
T R NKN P
Sbjct: 99 TSRSNKNFP 107


>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC

Query: 2 TIRENKNI 9
T++EN+NI
Sbjct: 48 TVKENQNI 55


>sp|THIL_NITMS|THIAMINE-MONOPHOSPHATE kinase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 RENKNIP 10
R+NK+IP
Sbjct: 294 RDNKDIP 300


>sp|Y1292_METJA|UNCHARACTERIZED protein MJ1292|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VTIRENKNIP 10
VTIR N +P
Sbjct: 155 VTIRNNDYVP 164


>sp|CDC62_THEAC|ORC1-TYPE DNA replication protein 2|Thermoplasma acidophilum (strain ATCC

Query: 1 VTIRENKN 8
+ IREN+N
Sbjct: 259 IAIRENRN 266


>sp|Y485_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IRENKNIP 10
I EN+NIP
Sbjct: 190 IAENENIP 197




110|Sequence|546|555|NKNIPEILKI

>sp|OTC_META3|ORNITHINE carbamoyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 NKNIPEILKI 10
NKNI E+LKI
Sbjct: 230 NKNIDEVLKI 239


>sp|CSM5_METJA|CRISPR system Cms protein Csm5|Methanocaldococcus jannaschii (strain ATCC

Query: 1 NKNIPEILKI 10
+KN+PE+LKI
Sbjct: 176 DKNLPELLKI 185


>sp|OTC_METM7|ORNITHINE carbamoyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 NKNIPEILKI 10
NKN+ EILKI
Sbjct: 230 NKNLDEILKI 239


>sp|OTC_METM5|ORNITHINE carbamoyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 NKNIPEILKI 10
NKN+ EILKI
Sbjct: 230 NKNLEEILKI 239


>sp|TDXH_NANEQ|PEROXIREDOXIN equitans (strain Kin4-M)

Query: 2 KNIPEILKI 10
+NIPEIL++
Sbjct: 143 RNIPEILRL 151


>sp|PYRK_METTH|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanothermobacter

Query: 3 NIPEILKI 10
N+PE+L+I
Sbjct: 5 NVPEVLEI 12


>sp|RS3A_NANEQ|SMALL ribosomal subunit protein eS1|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 NKNIPEILKI 10
NK IPE LKI
Sbjct: 160 NKEIPEQLKI 169


>sp|TDXH_METTM|PEROXIREDOXIN marburgensis (strain ATCC BAA-927

Query: 2 KNIPEILKI 10
+NIPEI+++
Sbjct: 142 RNIPEIVRM 150


>sp|TDXH_METTH|PEROXIREDOXIN thermautotrophicus (strain ATCC 29096

Query: 2 KNIPEILKI 10
+NIPEI+++
Sbjct: 142 RNIPEIVRM 150


>sp|FPOF_METMA|F(420)H(2) dehydrogenase subunit F|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NKNIPEILKI 10
+K IPEI+K+
Sbjct: 206 DKIIPEIMKV 215


>sp|CFBA_METBU|SIROHYDROCHLORIN cobaltochelatase|Methanococcoides burtonii (strain DSM 6242

Query: 1 NKNIPEILKI 10
++IPEILK+
Sbjct: 80 TEDIPEILKL 89


>sp|PURL_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KNIPEILK 9
KN PEI+K
Sbjct: 589 KNAPEIIK 596


>sp|CFBA_METMA|SIROHYDROCHLORIN cobaltochelatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NKNIPEILKI 10
K+IPEIL +
Sbjct: 80 TKDIPEILSL 89


>sp|PURL_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina barkeri (strain Fusaro /

Query: 2 KNIPEILK 9
KN PEI+K
Sbjct: 590 KNAPEIIK 597


>sp|OTC_METMP|ORNITHINE carbamoyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NKNIPEILKI 10
NK + EILKI
Sbjct: 230 NKQMDEILKI 239


>sp|AATA_METBF|A-TYPE ATP synthase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 4 IPEILKI 10
+PEILK+
Sbjct: 536 VPEILKL 542


>sp|SRP54_METTP|SIGNAL recognition particle 54 kDa|Methanothrix thermoacetophila (strain

Query: 1 NKNIPEILK 9
N+N PE+ K
Sbjct: 161 NENAPEVAK 169


>sp|QUEC1_SULTO|7-CYANO-7-DEAZAGUANINE synthase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KNIPEILKI 10
KN+ EILK+
Sbjct: 127 KNLGEILKV 135


>sp|HIS3_METMP|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NKNIPEILK 9
+KNI EI+K
Sbjct: 2 DKNIKEIIK 10


>sp|AATD_PYRHO|A-TYPE ATP synthase subunit D|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 IPEILKI 10
+PEILKI
Sbjct: 1 MPEILKI 7


>sp|AATD_PYRAB|A-TYPE ATP synthase subunit D|Pyrococcus abyssi (strain GE5 /

Query: 4 IPEILKI 10
+PEILKI
Sbjct: 1 MPEILKI 7




111|Sequence|551|560|EILKIQIIGL

>sp|APGM_SULTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EILKIQIIGL 10
E+LK IIGL
Sbjct: 38 ELLKNSIIGL 47




112|Sequence|556|565|QIIGLGTQVS

>sp|CAS5B_SACS2|CRISPR-ASSOCIATED protein Cas5 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QIIGLGTQVS 10
QII LGT+ S
Sbjct: 144 QIISLGTKES 153


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 IIGLGTQVS 10
IIG GT +S
Sbjct: 22 IIGSGTSIS 30




113|Sequence|561|570|GTQVSQRPGA

>sp|Y2401_ARCFU|UNCHARACTERIZED protein AF_2401|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QVSQRPG 9
Q+S+RPG
Sbjct: 204 QLSERPG 210




114|Sequence|566|575|QRPGAQALKV

>sp|IF2A_PYRAE|TRANSLATION initiation factor 2 subunit|Pyrobaculum aerophilum (strain ATCC

Query: 2 RPGAQALKV 10
RP +ALKV
Sbjct: 115 RPAEEALKV 123


>sp|YIH50_HALSA|UNCHARACTERIZED protein in transposable element|Halobacterium salinarum (strain

Query: 1 QRPGAQALK 9
++PG +ALK
Sbjct: 279 RKPGKEALK 287




115|Sequence|571|580|QALKVEAKLE

***** No hits found ******


116|Sequence|576|585|EAKLEHWYIT

>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 2 AKLEHWY 8
A+L HW+
Sbjct: 259 AELSHWF 265


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 4 LEHWY 8
L HWY
Sbjct: 624 LRHWY 628


>sp|RS3A_THESM|SMALL ribosomal subunit protein eS1|Thermococcus sibiricus (strain DSM

Query: 3 KLEHWYI 9
KL+ WYI
Sbjct: 18 KLKDWYI 24


>sp|RS3A_THEKO|SMALL ribosomal subunit protein eS1|Thermococcus kodakarensis (strain

Query: 3 KLEHWYI 9
K++ WYI
Sbjct: 18 KMKEWYI 24




117|Sequence|581|590|HWYITGLRQQ

>sp|Y636_METJA|UNCHARACTERIZED protein MJ0636|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YITGLRQ 9
YITGLR+
Sbjct: 53 YITGLRE 59


>sp|TREZ_SACSO|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (Sulfolobus

Query: 1 HWYITGLRQ 9
H Y+TG RQ
Sbjct: 316 HAYLTGERQ 324


>sp|CAPPA_PYRCJ|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 WYITGL 7
WY TGL
Sbjct: 356 WYATGL 361


>sp|Y746_HALSA|UPF0229 protein VNG_0746C|Halobacterium salinarum (strain ATCC 700922

Query: 2 WYITG 6
WY+TG
Sbjct: 294 WYLTG 298




118|Sequence|586|595|GLRQQDIVPS

>sp|DPOL_METVO|DNA polymerase|Methanococcus voltae

Query: 5 QDIVPS 10
QDIVPS
Sbjct: 154 QDIVPS 159


>sp|TRM56_METLZ|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanocorpusculum

Query: 1 GLRQQDIV 8
GLR QD++
Sbjct: 91 GLRLQDVI 98


>sp|SYE_PYRAE|GLUTAMATE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GLRQQDIVP 9
GLR + IVP
Sbjct: 367 GLRNRGIVP 375


>sp|SYE_METS5|GLUTAMATE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 GLRQQDIVP 9
GLR++ I+P
Sbjct: 365 GLRRRGIIP 373


>sp|SYE_HYPBU|GLUTAMATE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 GLRQQDIVP 9
GLR++ IVP
Sbjct: 360 GLRRRGIVP 368


>sp|TOP6A_HALSA|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 700922

Query: 1 GLRQQDIV 8
G+R QDIV
Sbjct: 286 GIRPQDIV 293


>sp|TOP6A_HALS3|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 29341

Query: 1 GLRQQDIV 8
G+R QDIV
Sbjct: 286 GIRPQDIV 293




119|Sequence|591|600|DIVPSLVASI

***** No hits found ******


120|Sequence|596|605|LVASIGDTTS

>sp|Y1066_METJA|UNCHARACTERIZED protein MJ1066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VASIGDTTS 10
+ +IGDTTS
Sbjct: 170 IGTIGDTTS 178


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 1 LVASIGDTT 9
+VA+IGD+T
Sbjct: 463 IVATIGDST 471


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain ATCC

Query: 1 LVASIGDTT 9
+VA+IGD+T
Sbjct: 463 IVATIGDST 471


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 1 LVASIGDTT 9
++A+IGD+T
Sbjct: 443 IIATIGDST 451


>sp|DPCKG_METST|GTP-DEPENDENT dephospho-CoA kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LVASIGDTTS 10
L+ SIGD T+
Sbjct: 39 LIISIGDATT 48


>sp|CYB_SULAC|CYTOCHROME b|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VASIGDTTS 10
VAS+G+T+S
Sbjct: 489 VASVGNTSS 497


>sp|TOP6B_SACSH|TYPE 2 DNA topoisomerase 6|Saccharolobus shibatae (strain ATCC 51178

Query: 4 SIGDTTS 10
SIGDTT+
Sbjct: 264 SIGDTTA 270


>sp|TOP6B_SACS2|TYPE 2 DNA topoisomerase 6|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 SIGDTTS 10
SIGDTT+
Sbjct: 264 SIGDTTA 270


>sp|TOP6B_SACI7|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 SIGDTTS 10
SIGDTT+
Sbjct: 264 SIGDTTA 270


>sp|TOP6B_SACI6|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.4 /

Query: 4 SIGDTTS 10
SIGDTT+
Sbjct: 264 SIGDTTA 270


>sp|TOP6B_SACI4|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.14.25 /

Query: 4 SIGDTTS 10
SIGDTT+
Sbjct: 264 SIGDTTA 270


>sp|TOP6B_SACI3|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.27)

Query: 4 SIGDTTS 10
SIGDTT+
Sbjct: 264 SIGDTTA 270


>sp|TOP6B_SACI2|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 SIGDTTS 10
SIGDTT+
Sbjct: 264 SIGDTTA 270


>sp|TOP6B_SACI1|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 SIGDTTS 10
SIGDTT+
Sbjct: 264 SIGDTTA 270


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LVASIGDTTS 10
LVAS+G T+S
Sbjct: 634 LVASLGYTSS 643


>sp|DPCKG_METMP|GTP-DEPENDENT dephospho-CoA kinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 VASIGDTTS 10
V SIGD T+
Sbjct: 30 VVSIGDVTT 38


>sp|DPCKG_METM7|GTP-DEPENDENT dephospho-CoA kinase|Methanococcus maripaludis (strain C7 /

Query: 2 VASIGDTTS 10
V SIGD T+
Sbjct: 30 VVSIGDVTT 38


>sp|DPCKG_METM6|GTP-DEPENDENT dephospho-CoA kinase|Methanococcus maripaludis (strain C6 /

Query: 2 VASIGDTTS 10
V SIGD T+
Sbjct: 30 VVSIGDVTT 38


>sp|DPCKG_METM5|GTP-DEPENDENT dephospho-CoA kinase|Methanococcus maripaludis (strain C5 /

Query: 2 VASIGDTTS 10
V SIGD T+
Sbjct: 30 VVSIGDVTT 38


>sp|PHOU_METJA|PHOSPHATE-SPECIFIC transport system accessory protein|Methanocaldococcus jannaschii

Query: 1 LVASIGD 7
+VASIGD
Sbjct: 195 IVASIGD 201


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LVASIGDTT 9
L+ S+GD+T
Sbjct: 514 LIESLGDST 522


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LVASIGDTT 9
L+ S+GD+T
Sbjct: 514 LIESLGDST 522


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LVASIGDTT 9
L+ S+GD+T
Sbjct: 514 LIESLGDST 522


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LVASIGDTT 9
L+ S+GD+T
Sbjct: 514 LIESLGDST 522


>sp|DHQS_NATPD|3-DEHYDROQUINATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LVASIGDTT 9
L+A IGD T
Sbjct: 150 LIARIGDET 158


>sp|THSB_HALSA|THERMOSOME subunit beta|Halobacterium salinarum (strain ATCC 700922

Query: 1 LVASIGDTT 9
LV+S+GD T
Sbjct: 55 LVSSMGDVT 63




121|Sequence|601|610|GDTTSSLLKI

>sp|SYR_SULAC|ARGININE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GDTTSSLLKI 10
GDT S +LKI
Sbjct: 130 GDTISRMLKI 139


>sp|RSMA_METMA|PROBABLE ribosomal RNA small subunit|Methanosarcina mazei (strain ATCC

Query: 4 TSSLLKI 10
TSSLLKI
Sbjct: 223 TSSLLKI 229


>sp|Y354_METJA|UNCHARACTERIZED protein MJ0354|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GDTTSSLLKI 10
GDT ++LK+
Sbjct: 20 GDTVGAILKL 29


>sp|Y1756_METM5|UNCHARACTERIZED solute-binding protein MmarC5_1756|Methanococcus maripaludis

Query: 2 DTTSSLLKI 10
DTT +LKI
Sbjct: 35 DTTPKILKI 43




122|Sequence|606|615|SLLKIKFETN

>sp|AATA_METAR|A-TYPE ATP synthase subunit A|Methanocella arvoryzae (strain DSM 22066

Query: 2 LLKIKFETN 10
L K+KFE N
Sbjct: 549 LAKVKFEAN 557


>sp|DCDB_METMP|DCTP deaminase, dUMP-forming|Methanococcus maripaludis (strain DSM 14266

Query: 1 SLLKIKFETN 10
SL+K FETN
Sbjct: 194 SLIKKDFETN 203


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 4 KIKFETN 10
KI++ETN
Sbjct: 509 KIRYETN 515


>sp|IDI2_PYRFU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SLLKIKFETN 10
SL +++F TN
Sbjct: 262 SLAEVRFSTN 271


>sp|AGOG_THEKO|N-GLYCOSYLASE/DNA lyase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LLKIKFETN 10
+KIK++TN
Sbjct: 6 FVKIKYQTN 14




123|Sequence|611|620|KFETNPEDSP

>sp|Y1355_METJA|UNCHARACTERIZED protein MJ1355|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KFETNPEDSP 10
K+ETNPE P
Sbjct: 284 KYETNPEIIP 293


>sp|MRE11_PYRHO|DNA double-strand break repair protein|Pyrococcus horikoshii (strain

Query: 1 KFETNPEDSP 10
+FETN DSP
Sbjct: 210 RFETNYGDSP 219


>sp|PANB_PYRIL|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 FETNPEDS 9
+ET PED+
Sbjct: 87 YETGPEDA 94


>sp|TSGDD_HALVD|GLUCOSE import ATP-binding protein TsgD13|Haloferax volcanii (strain ATCC

Query: 2 FETNPEDS 9
+ET PED+
Sbjct: 513 YETTPEDA 520


>sp|PANB_PYRNV|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum neutrophilum (strain DSM

Query: 2 FETNPEDS 9
+ET PED+
Sbjct: 87 YETGPEDA 94


>sp|TBPF_HALSA|TATA-BOX-BINDING protein F|Halobacterium salinarum (strain ATCC 700922

Query: 3 ETNPEDSP 10
E NPED P
Sbjct: 36 EYNPEDFP 43


>sp|TFRA_METTM|FUMARATE reductase (CoM/CoB) subunit A|Methanothermobacter marburgensis

Query: 5 NPEDSP 10
+PEDSP
Sbjct: 62 DPEDSP 67


>sp|SYK_THEAC|LYSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KFETNPE 7
KF+TNPE
Sbjct: 459 KFKTNPE 465


>sp|TBPB_HALSA|TATA-BOX-BINDING protein B|Halobacterium salinarum (strain ATCC 700922

Query: 3 ETNPEDSP 10
E NPED P
Sbjct: 36 EYNPEDFP 43


>sp|TRUD_HALSA|PROBABLE tRNA pseudouridine synthase D|Halobacterium salinarum (strain

Query: 2 FETNPEDSP 10
F+T P D+P
Sbjct: 42 FDTQPADAP 50


>sp|TRUD_HALS3|PROBABLE tRNA pseudouridine synthase D|Halobacterium salinarum (strain

Query: 2 FETNPEDSP 10
F+T P D+P
Sbjct: 42 FDTQPADAP 50


>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 2 FETNPEDS 9
FE+NPE S
Sbjct: 375 FESNPEVS 382


>sp|PYRG_METPE|CTP synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 KFETNPED 8
++E NPE+
Sbjct: 454 RYEVNPEE 461


>sp|SYE_METS5|GLUTAMATE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 KFETNPED 8
+ +TNPED
Sbjct: 243 RIKTNPED 250


>sp|RFCL_METM6|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C6 /

Query: 2 FETNPEDS 9
FE+NPE S
Sbjct: 375 FESNPEVS 382


>sp|MCRA_METKA|METHYL-COENZYME M reductase I subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 KFETNPED 8
KFE +PE+
Sbjct: 16 KFEESPEE 23


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FETNPED 8
FE NP+D
Sbjct: 24 FEANPDD 30




124|Sequence|616|625|PEDSPADQTL

>sp|TRPG_METTH|ANTHRANILATE synthase component 2|Methanothermobacter thermautotrophicus (strain

Query: 1 PEDSPAD 7
PED+PAD
Sbjct: 143 PEDTPAD 149


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 1 PEDSPADQTL 10
P++SP D+T+
Sbjct: 224 PQNSPDDRTI 233


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PEDSPADQTL 10
PE++P DQ +
Sbjct: 223 PENAPQDQVV 232


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 PEDSPADQTL 10
PE++P DQ +
Sbjct: 223 PENAPEDQVV 232


>sp|CSG2_HALHT|CELL surface glycoprotein 2|Haloarcula hispanica (strain ATCC 33960

Query: 1 PEDSPAD 7
PED+PAD
Sbjct: 875 PEDTPAD 881


>sp|Y3997_METAC|UPF0288 protein MA_3997|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PEDSPADQTL 10
PE++PAD L
Sbjct: 443 PENTPADTVL 452


>sp|RS11_CENSY|SMALL ribosomal subunit protein uS11|Cenarchaeum symbiosum (strain A)

Query: 1 PEDSPADQTL 10
PE +PAD+ L
Sbjct: 66 PETTPADEKL 75


>sp|Y706_METBF|UPF0288 protein Mbar_A0706|Methanosarcina barkeri (strain Fusaro /

Query: 1 PEDSPADQTL 10
PE++P D+ L
Sbjct: 443 PENTPTDKVL 452


>sp|SYFA_PYRFU|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PEDSPADQTL 10
PE+ P D+ L
Sbjct: 134 PEERPIDKAL 143


>sp|LEUC_NATPD|3-ISOPROPYLMALATE dehydratase large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PEDSPADQ 8
PED PAD+
Sbjct: 309 PEDLPADK 316


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PEDSPADQT 9
PED P D T
Sbjct: 424 PEDLPIDPT 432


>sp|CARA_METKA|CARBAMOYL phosphate synthase small chain|Methanopyrus kandleri (strain AV19 /

Query: 1 PEDSPADQTL 10
P+D P+D+ L
Sbjct: 135 PDDQPSDEEL 144


>sp|RFCL_HALSA|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 700922

Query: 2 EDSPADQT 9
EDS AD+T
Sbjct: 445 EDSAADET 452


>sp|RFCL_HALS3|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 29341

Query: 2 EDSPADQT 9
EDS AD+T
Sbjct: 445 EDSAADET 452




125|Sequence|621|630|ADQTLIVQSQ

>sp|HUTU_THEVO|PROBABLE urocanate hydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 DQTLIVQS 9
D+TL++QS
Sbjct: 74 DETLLIQS 81


>sp|HUTU_THEAC|PROBABLE urocanate hydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DQTLIVQS 9
D+TL++QS
Sbjct: 74 DETLLIQS 81


>sp|CMR1B_PYRFU|CRISPR system Cmr subunit Cmr1-2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ADQTLIVQSQ 10
AD+T+IV S+
Sbjct: 93 ADKTIIVWSE 102




126|Sequence|626|635|IVQSQPVEVI

>sp|TF2B_METST|TRANSCRIPTION initiation factor IIB|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 IVQSQPVEVI 10
+VQS+ +E+I
Sbjct: 236 VVQSKAIEII 245




127|Sequence|631|640|PVEVIYDAKT

>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 VEVIYDAKT 10
VEVIY+AK
Sbjct: 740 VEVIYNAKA 748


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii (strain

Query: 3 EVIYDAKT 10
EV+YD KT
Sbjct: 458 EVMYDGKT 465


>sp|SYL_PYRAE|LEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VEVIYDAKT 10
VEV+Y+AK+
Sbjct: 740 VEVLYNAKS 748


>sp|TRXB_METJA|PUTATIVE thioredoxin reductase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VEVIYDAK 9
VE+IY+AK
Sbjct: 192 VEIIYNAK 199


>sp|RIFK_METST|RIBOFLAVIN kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PVEVIYDAKT 10
PV+ +YD T
Sbjct: 95 PVKTVYDTDT 104


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 3 EVIYDAKT 10
EV+YD +T
Sbjct: 967 EVVYDGRT 974


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 3 EVIYDAKT 10
EV+YD +T
Sbjct: 968 EVVYDGRT 975


>sp|SYL_PYRNV|LEUCINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 VEVIYDAKT 10
VEV+Y+AK
Sbjct: 740 VEVLYNAKA 748


>sp|Y1221_METJA|UNCHARACTERIZED protein MJ1221|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PVEVIYDAKT 10
P+E+ Y AKT
Sbjct: 102 PLELYYKAKT 111


>sp|CDC6_THEKO|ORC1-TYPE DNA replication protein|Thermococcus kodakarensis (strain ATCC

Query: 1 PVEVIY 6
PVEVIY
Sbjct: 92 PVEVIY 97


>sp|CDC6_PYRAB|ORC1-TYPE DNA replication protein|Pyrococcus abyssi (strain GE5 /

Query: 1 PVEVIY 6
PVEVIY
Sbjct: 95 PVEVIY 100


>sp|ARGC_METMJ|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 VIYDAKT 10
+IYD+KT
Sbjct: 162 IIYDSKT 168




128|Sequence|636|645|YDAKTVNAVV

>sp|YSO2_ACIAM|UNCHARACTERIZED transporter in sor 3'region|Acidianus ambivalens (Desulfurolobus

Query: 1 YDAKTVNAV 9
+DA +VNAV
Sbjct: 131 FDATSVNAV 139


>sp|MCRD_METJA|METHYL-COENZYME M reductase I operon|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YDAKTVNAVV 10
YD KTV VV
Sbjct: 27 YDLKTVERVV 36


>sp|MCR_SULTO|MALONYL-COA reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YDAKTVNAV 9
YDAKT+ +
Sbjct: 206 YDAKTIKEI 214


>sp|MCR_METS5|MALONYL CoA reductase (NADP)|Metallosphaera sedula (strain ATCC 51363

Query: 1 YDAKTVNAV 9
YDAKTV +
Sbjct: 203 YDAKTVKEI 211


>sp|RIO2_METJA|RIO-TYPE serine/threonine-protein kinase Rio2|Methanocaldococcus

Query: 1 YDAKTVNAVV 10
YDA +NA V
Sbjct: 50 YDALAINAFV 59


>sp|GLPA1_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A1|Haloferax volcanii

Query: 1 YDAKTVNA 8
YD KTV A
Sbjct: 491 YDEKTVRA 498


>sp|GVPN2_HALSA|GAS vesicle ATPase GvpN2|Halobacterium salinarum (strain ATCC 700922

Query: 1 YDAKTVNAVV 10
YDA+T A+V
Sbjct: 246 YDAETETAIV 255


>sp|RS6E_METST|SMALL ribosomal subunit protein eS6|Methanosphaera stadtmanae (strain

Query: 2 DAKTVNAV 9
DAKTVN +
Sbjct: 22 DAKTVNGL 29




129|Sequence|641|650|VNAVVEFFQS

>sp|PSA_ARCFU|PROTEASOME subunit alpha|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NAVVEFFQ 9
NAV EFF+
Sbjct: 169 NAVTEFFE 176


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VNAVVEFFQ 9
++AVVE+F+
Sbjct: 261 ISAVVEYFK 269


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VNAVVEFFQ 9
++AVVE+F+
Sbjct: 261 ISAVVEYFK 269


>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VNAVVEFFQ 9
++AV+E+F+
Sbjct: 261 ISAVIEYFE 269


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VNAVVEFFQ 9
++AV+E+F+
Sbjct: 261 ISAVIEYFE 269


>sp|Y662_METJA|UNCHARACTERIZED protein MJ0662|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NAVVEFFQ 9
N V+EFF+
Sbjct: 57 NIVIEFFK 64




130|Sequence|646|655|EFFQSNKGLD

>sp|SPEE_PYRFU|POLYAMINE aminopropyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EFFQSNKGLD 10
EF ++N+G D
Sbjct: 145 EFIKNNRGFD 154


>sp|SYFB_METTH|PHENYLALANINE--TRNA ligase beta subunit|Methanothermobacter thermautotrophicus (strain

Query: 1 EFFQSNKGLD 10
EFF+ NK D
Sbjct: 427 EFFEDNKHED 436


>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 2 FFQSNKGL 9
QSNKGL
Sbjct: 116 LLQSNKGL 123


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 1 EFFQSNKGLD 10
E ++NKGLD
Sbjct: 470 ESIKNNKGLD 479


>sp|TOP6B_HALSA|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 700922

Query: 1 EFFQSNK 7
EFF+ NK
Sbjct: 30 EFFEKNK 36


>sp|TOP6B_HALS3|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 29341

Query: 1 EFFQSNK 7
EFF+ NK
Sbjct: 30 EFFEKNK 36


>sp|TOP6B_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EFFQSNK 7
EFF+ NK
Sbjct: 12 EFFEKNK 18


>sp|TOP6B_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EFFQSNKGL 9
EFF+ NK +
Sbjct: 32 EFFEKNKQM 40


>sp|SYT_METAC|THREONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EFFQSNKGL 9
+F++SNK L
Sbjct: 402 DFYESNKEL 410


>sp|AROC_METM5|CHORISMATE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 EFFQSNKGLD 10
EFF+SN ++
Sbjct: 172 EFFESNSNIE 181


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EFFQSNK 7
+FF+SNK
Sbjct: 717 DFFESNK 723


>sp|SYT_METBF|THREONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EFFQSNKGL 9
+F++SNK L
Sbjct: 402 DFYESNKEL 410


>sp|TOP6B_HALMA|TYPE 2 DNA topoisomerase 6|Haloarcula marismortui (strain ATCC 43049

Query: 1 EFFQSNK 7
EFF+ NK
Sbjct: 29 EFFEKNK 35


>sp|SPEE_PYRAB|POLYAMINE aminopropyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 EFFQSNKGLD 10
EF + N G D
Sbjct: 144 EFIKENSGFD 153


>sp|SYT_METVS|THREONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EFFQSNK 7
EFF+ NK
Sbjct: 383 EFFEENK 389




131|Sequence|651|660|NKGLDLEQIT

>sp|RL22_SULTO|LARGE ribosomal subunit protein uL22|Sulfurisphaera tokodaii (strain DSM

Query: 1 NKGLDLEQI 9
+KGLDLE +
Sbjct: 107 SKGLDLENV 115


>sp|NADK_THEAC|NAD kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NKGLDLEQIT 10
+KGLD+ QI+
Sbjct: 43 SKGLDISQIS 52


>sp|RL22_CENSY|LARGE ribosomal subunit protein uL22|Cenarchaeum symbiosum (strain A)

Query: 2 KGLDLEQIT 10
KG+DL+++T
Sbjct: 104 KGMDLDRLT 112


>sp|RL22_SACS2|LARGE ribosomal subunit protein uL22|Saccharolobus solfataricus (strain

Query: 1 NKGLDLEQI 9
NKGLD++++
Sbjct: 107 NKGLDVDKL 115


>sp|RL22_PYRCJ|LARGE ribosomal subunit protein uL22|Pyrobaculum calidifontis (strain DSM

Query: 2 KGLDLEQI 9
KGLD+E++
Sbjct: 120 KGLDVERL 127


>sp|RL22_AERPE|LARGE ribosomal subunit protein uL22|Aeropyrum pernix (strain ATCC 700893

Query: 1 NKGLDLEQI 9
NK LD+E++
Sbjct: 107 NKNLDVERL 115


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 2 KGLDLEQI 9
KG+D+E+I
Sbjct: 968 KGVDIEKI 975




132|Sequence|656|665|LEQITSATLM

***** No hits found ******


133|Sequence|661|670|SATLMKLEEI

***** No hits found ******


134|Sequence|666|675|KLEEIKERTA

>sp|ARGC_METMA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LEEIKER 8
LEEI+ER
Sbjct: 65 LEEIRER 71


>sp|RL10_SACS2|LARGE ribosomal subunit protein uL10|Saccharolobus solfataricus (strain

Query: 1 KLEEIKERT 9
KLEE+KE T
Sbjct: 17 KLEEVKELT 25


>sp|RL10_SACI3|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 KLEEIKERT 9
KLEE+KE T
Sbjct: 17 KLEEVKELT 25


>sp|RL10_SACI7|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 KLEEIKERT 9
KLEE+KE T
Sbjct: 17 KLEEVKELT 25


>sp|RL10_SACI6|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 KLEEIKERT 9
KLEE+KE T
Sbjct: 17 KLEEVKELT 25


>sp|RL10_SACI4|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 KLEEIKERT 9
KLEE+KE T
Sbjct: 17 KLEEVKELT 25


>sp|RL10_SACI2|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 KLEEIKERT 9
KLEE+KE T
Sbjct: 17 KLEEVKELT 25


>sp|RL10_SACI1|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 KLEEIKERT 9
KLEE+KE T
Sbjct: 17 KLEEVKELT 25


>sp|RAD50_METAC|DNA double-strand break repair Rad50|Methanosarcina acetivorans (strain

Query: 1 KLEEIKERTA 10
KLEE +ERT
Sbjct: 168 KLEEYRERTG 177


>sp|ILVD_META3|DIHYDROXY-ACID dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 EEIKERTA 10
EEIKER A
Sbjct: 512 EEIKERLA 519


>sp|ILVD_METJA|DIHYDROXY-ACID dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EEIKERTA 10
EEIKER A
Sbjct: 513 EEIKERLA 520


>sp|TRM14_ARCFU|TRNA (guanine(6)-N2)-methyltransferase|Archaeoglobus fulgidus (strain

Query: 1 KLEEIKER 8
K+EEI+ER
Sbjct: 55 KVEEIRER 62


>sp|RRP4_PYRFU|EXOSOME complex component Rrp4|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KLEEIKER 8
KL+E+KER
Sbjct: 229 KLQELKER 236


>sp|RLME_METPE|RIBOSOMAL RNA large subunit methyltransferase|Methanosphaerula palustris

Query: 1 KLEEIKER 8
KL+EI+ER
Sbjct: 26 KLQEIQER 33


>sp|ASSY_PICTO|ARGININOSUCCINATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 LEEIKER 8
LEEIKE+
Sbjct: 41 LEEIKEK 47


>sp|Y500_METJA|UNCHARACTERIZED protein MJ0500|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LEEIKER 8
+EEIKER
Sbjct: 6 IEEIKER 12




135|Sequence|671|680|KERTATGLTH

>sp|Y2028_ARCFU|UNCHARACTERIZED protein AF_2028|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ERTATGLTH 10
+ TATGLT+
Sbjct: 319 KNTATGLTY 327




136|Sequence|676|685|TGLTHIIETR

>sp|SYE_HALSA|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 TGLTHII 7
TG+THII
Sbjct: 301 TGVTHII 307


>sp|SYE_HALS3|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 TGLTHII 7
TG+THII
Sbjct: 301 TGVTHII 307


>sp|SYE_HALWD|GLUTAMATE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 TGLTHII 7
TG+THII
Sbjct: 306 TGVTHII 312


>sp|HIS7_PYRCJ|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 LTHIIET 9
LTH++ET
Sbjct: 31 LTHMVET 37


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GLTHIIETR 10
G+TH++ R
Sbjct: 294 GITHVLRAR 302


>sp|Y500_METJA|UNCHARACTERIZED protein MJ0500|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GLTHIIETR 10
G+THI T+
Sbjct: 219 GITHIASTK 227


>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 GLTHII 7
GLTH+I
Sbjct: 288 GLTHVI 293


>sp|Y2028_ARCFU|UNCHARACTERIZED protein AF_2028|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TGLTHIIET 9
TGLT+I+++
Sbjct: 323 TGLTYIVKS 331


>sp|HIS7_PYRAR|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 LTHIIET 9
LTH++ET
Sbjct: 30 LTHMVET 36


>sp|PGK_PYRHO|PHOSPHOGLYCERATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TGLTHI 6
TG+THI
Sbjct: 371 TGITHI 376




137|Sequence|681|690|IIETRKVLDL

>sp|FEN_NITMS|FLAP endonuclease 1|Nitrosopumilus maritimus (strain SCM1)

Query: 1 IIETRKVLD 9
IIET+K LD
Sbjct: 209 IIETQKTLD 217


>sp|XYLG_SULAC|XYLOSE/ARABINOSE import ATP-binding protein XylG|Sulfolobus acidocaldarius (strain

Query: 1 IIETRKVLDL 10
++E RKVL+L
Sbjct: 174 VVEARKVLEL 183


>sp|DCDA_METJA|DIAMINOPIMELATE decarboxylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IIETRKVLDL 10
I ETRKV+D
Sbjct: 226 IEETRKVMDF 235


>sp|TRUB_METTH|PROBABLE tRNA pseudouridine synthase B|Methanothermobacter

Query: 1 IIETRKVL 8
+IETRKV
Sbjct: 306 VIETRKVF 313


>sp|ENO_SACI6|ENOLASE islandicus (strain M.16.4 /

Query: 3 ETRKVLDL 10
ETR+ LDL
Sbjct: 214 ETREALDL 221


>sp|ENO_SACI4|ENOLASE islandicus (strain M.14.25 /

Query: 3 ETRKVLDL 10
ETR+ LDL
Sbjct: 214 ETREALDL 221


>sp|ENO_SACI3|ENOLASE islandicus (strain M.16.27) (Sulfolobus

Query: 3 ETRKVLDL 10
ETR+ LDL
Sbjct: 214 ETREALDL 221


>sp|ENO_SACI7|ENOLASE islandicus (strain Y.G.57.14 /

Query: 3 ETRKVLDL 10
ETR+ LDL
Sbjct: 214 ETREALDL 221


>sp|ENO_SACI2|ENOLASE islandicus (strain L.S.2.15 /

Query: 3 ETRKVLDL 10
ETR+ LDL
Sbjct: 214 ETREALDL 221


>sp|ENO_SACI1|ENOLASE islandicus (strain Y.N.15.51 /

Query: 3 ETRKVLDL 10
ETR+ LDL
Sbjct: 214 ETREALDL 221


>sp|LYSZ_PYRHO|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrococcus horikoshii

Query: 4 TRKVLDL 10
TRKVLD+
Sbjct: 67 TRKVLDV 73


>sp|Y811_SULTO|RUTC family protein STK_08110|Sulfurisphaera tokodaii (strain DSM

Query: 2 IETRKVLD 9
++TR+VLD
Sbjct: 48 VQTRQVLD 55




138|Sequence|686|695|KVLDLRINLK

>sp|Y761_METBF|PUTATIVE nickel insertion protein|Methanosarcina barkeri (strain Fusaro /

Query: 1 KVLDLRINL 9
K LD+RIN+
Sbjct: 54 KALDVRINI 62


>sp|MTBB2_METAC|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina acetivorans (strain ATCC

Query: 1 KVLDLRIN 8
K+LD+RIN
Sbjct: 450 KLLDVRIN 457


>sp|Y1617_METMA|PUTATIVE nickel insertion protein|Methanosarcina mazei (strain ATCC

Query: 1 KVLDLRINL 9
K LD+RIN+
Sbjct: 54 KALDVRINV 62


>sp|MTBB2_METBF|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri (strain Fusaro /

Query: 1 KVLDLRIN 8
K+LD++IN
Sbjct: 450 KLLDIKIN 457


>sp|MTBB1_METBF|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri (strain Fusaro /

Query: 1 KVLDLRIN 8
K+LD++IN
Sbjct: 450 KLLDIKIN 457


>sp|MTBB1_METBA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri

Query: 1 KVLDLRIN 8
K+LD++IN
Sbjct: 450 KLLDIKIN 457


>sp|MTBB1_METAC|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina acetivorans (strain ATCC

Query: 1 KVLDLRIN 8
K+LD++IN
Sbjct: 450 KLLDIKIN 457


>sp|Y550_METVS|UPF0280 protein Mevan_0550|Methanococcus vannielii (strain ATCC 35089

Query: 1 KVLDLRINLK 10
K++D R+NL+
Sbjct: 31 KIIDERLNLE 40


>sp|Y1257_METJA|UNCHARACTERIZED protein MJ1257|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KVLDLRINLK 10
K L+LR+NLK
Sbjct: 130 KDLNLRVNLK 139


>sp|PRIL_SACS2|DNA primase large subunit PriL|Saccharolobus solfataricus (strain ATCC

Query: 1 KVLDLRIN 8
K+LDL+IN
Sbjct: 111 KLLDLKIN 118




139|Sequence|691|700|RINLKPSYLV

>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RINLKPSYL 9
RIN KP YL
Sbjct: 424 RINWKPDYL 432


>sp|PURP_METTH|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothermobacter thermautotrophicus

Query: 2 INLKPSYLV 10
INL PSY++
Sbjct: 249 INLDPSYVI 257


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 3 NLKPSYLV 10
NLKP Y+V
Sbjct: 395 NLKPGYIV 402


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 3 NLKPSYLV 10
NLKP Y+V
Sbjct: 395 NLKPGYIV 402


>sp|PURP_METST|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosphaera stadtmanae (strain ATCC

Query: 3 NLKPSYLV 10
NL PSY+V
Sbjct: 250 NLSPSYVV 257


>sp|PURP_METS3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanobrevibacter smithii (strain ATCC

Query: 2 INLKPSYLV 10
I+L PSY+V
Sbjct: 249 IDLSPSYVV 257


>sp|AMPA_AERPE|PROBABLE cytosol aminopeptidase|Aeropyrum pernix (strain ATCC 700893

Query: 2 INLKPS 7
INLKPS
Sbjct: 257 INLKPS 262


>sp|Y1200_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB12000|Pyrococcus abyssi (strain GE5 /

Query: 5 KPSYLV 10
KPSYLV
Sbjct: 219 KPSYLV 224


>sp|PURP_METJA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanocaldococcus jannaschii (strain

Query: 2 INLKPSYLV 10
+N+ PSY++
Sbjct: 247 MNINPSYVI 255


>sp|HIS1_IGNH4|ATP phosphoribosyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 RINLKPSYL 9
R ++PSYL
Sbjct: 21 RAGIRPSYL 29


>sp|Y541_PYRHO|UNCHARACTERIZED ATP-binding protein PH0541|Pyrococcus horikoshii (strain ATCC

Query: 5 KPSYLV 10
KPSYLV
Sbjct: 231 KPSYLV 236


>sp|KAE1_SACI7|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 INLKPSYLV 10
+NL P Y++
Sbjct: 168 VNLAPPYII 176


>sp|KAE1_SACI2|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 INLKPSYLV 10
+NL P Y++
Sbjct: 168 VNLAPPYII 176


>sp|KAE1_SACI1|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 INLKPSYLV 10
+NL P Y++
Sbjct: 168 VNLAPPYII 176


>sp|KAE1_SACI6|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 INLKPSYLV 10
+NL P Y++
Sbjct: 168 VNLAPPYII 176


>sp|KAE1_SACI4|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 INLKPSYLV 10
+NL P Y++
Sbjct: 168 VNLAPPYII 176


>sp|KAE1_SACI3|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 INLKPSYLV 10
+NL P Y++
Sbjct: 168 VNLAPPYII 176


>sp|CDPAS_PYRFU|CDP-ARCHAEOL synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RINLKPSY 8
R+NL P Y
Sbjct: 103 RLNLPPGY 110




140|Sequence|696|705|PSYLVVPQTG

>sp|Y1477_METJA|UNCHARACTERIZED protein MJ1477|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SYLVVPQTG 10
S++++PQ G
Sbjct: 230 SFIIIPQNG 238


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 SYLVVPQT 9
SY+VVP T
Sbjct: 130 SYIVVPTT 137


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SYLVVPQT 9
SY+VVP T
Sbjct: 130 SYIVVPTT 137


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SYLVVPQT 9
SY+VVP T
Sbjct: 130 SYIVVPTT 137


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 2 SYLVVPQT 9
SY+VVP T
Sbjct: 130 SYIVVPTT 137


>sp|NFI_THEVO|BIFUNCTIONAL methyltransferase/endonuclease|Thermoplasma volcanium (strain

Query: 1 PSYLVVPQTG 10
P Y VVP G
Sbjct: 60 PCYKVVPHDG 69


>sp|KDPB_THEVO|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma volcanium (strain ATCC

Query: 1 PSYLVVPQTG 10
PS+ VP TG
Sbjct: 48 PSFFGVPYTG 57


>sp|RIFK_THEVO|RIBOFLAVIN kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PSYLVVPQ 8
PS+L++P+
Sbjct: 179 PSFLIMPE 186


>sp|CYAS_METBF|CYSTEATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 YLVVPQTG 10
Y+VVP++G
Sbjct: 147 YIVVPESG 154


>sp|CYAS_METMA|CYSTEATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SYLVVPQTG 10
+Y+VVP +G
Sbjct: 146 AYIVVPDSG 154


>sp|PCNA1_AERPE|DNA polymerase sliding clamp 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 SYLVVPQTG 10
+YL+ P TG
Sbjct: 239 TYLLAPSTG 247


>sp|Y1039_PYRHO|UNCHARACTERIZED ABC transporter extracellular-binding protein|Pyrococcus horikoshii

Query: 1 PSYLVVPQ 8
P YL+VP+
Sbjct: 311 PDYLMVPK 318


>sp|RSAMH_PYRHO|(R)-S-ADENOSYL-L-METHIONINE hydrolase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 YLVVPQTG 10
YLVVP G
Sbjct: 85 YLVVPDNG 92


>sp|CYAS_METAC|CYSTEATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 YLVVPQTG 10
Y+VVP +G
Sbjct: 147 YIVVPDSG 154




141|Sequence|701|710|VPQTGFHHEK

>sp|RS7_AERPE|SMALL ribosomal subunit protein uS7|Aeropyrum pernix (strain ATCC

Query: 1 VPQTGFHHEK 10
+P TG HEK
Sbjct: 50 LPHTGGRHEK 59


>sp|COBS_METTH|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanothermobacter thermautotrophicus

Query: 4 TGFHH 8
TGFHH
Sbjct: 74 TGFHH 78


>sp|TIAS_HALWD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Haloquadratum walsbyi (strain

Query: 1 VPQTGFHHE 9
+ Q G+HH+
Sbjct: 128 IEQVGYHHQ 136


>sp|PELO_NATPD|PROTEIN pelota homolog|Natronomonas pharaonis (strain ATCC 35678

Query: 3 QTGFHH 8
Q GFHH
Sbjct: 96 QLGFHH 101


>sp|Y863_ARCFU|UNCHARACTERIZED protein AF_0863|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 TGFHHEK 10
T FHH K
Sbjct: 122 TAFHHAK 128


>sp|PELO_HALMA|PROTEIN pelota homolog|Haloarcula marismortui (strain ATCC 43049

Query: 3 QTGFHH 8
Q GFHH
Sbjct: 96 QLGFHH 101


>sp|FRHA_METTH|COENZYME F420 hydrogenase subunit alpha|Methanothermobacter

Query: 5 GFHHE 9
GFHHE
Sbjct: 364 GFHHE 368


>sp|FOLD2_HALMA|BIFUNCTIONAL protein FolD 2|Haloarcula marismortui (strain ATCC 43049

Query: 5 GFHHE 9
GFHH+
Sbjct: 63 GFHHQ 67


>sp|RL3_PYRFU|LARGE ribosomal subunit protein uL3|Pyrococcus furiosus (strain ATCC

Query: 3 QTGFHH 8
Q GFHH
Sbjct: 273 QMGFHH 278


>sp|RL3_PYRAB|LARGE ribosomal subunit protein uL3|Pyrococcus abyssi (strain GE5 /

Query: 3 QTGFHH 8
Q GFHH
Sbjct: 270 QMGFHH 275


>sp|RL3_THESM|LARGE ribosomal subunit protein uL3|Thermococcus sibiricus (strain DSM

Query: 3 QTGFHH 8
Q GFHH
Sbjct: 268 QMGFHH 273


>sp|RL3_AERPE|LARGE ribosomal subunit protein uL3|Aeropyrum pernix (strain ATCC 700893

Query: 3 QTGFH 7
QTGFH
Sbjct: 257 QTGFH 261


>sp|RL3_PYRHO|LARGE ribosomal subunit protein uL3|Pyrococcus horikoshii (strain ATCC

Query: 3 QTGFHH 8
Q GFHH
Sbjct: 271 QMGFHH 276


>sp|CDC6_METLZ|ORC1-TYPE DNA replication protein|Methanocorpusculum labreanum (strain ATCC

Query: 1 VPQTGFHHEK 10
+P TG+H ++
Sbjct: 133 IPATGWHTDQ 142


>sp|RL3_THEON|LARGE ribosomal subunit protein uL3|Thermococcus onnurineus (strain NA1)

Query: 3 QTGFHHE 9
Q GFHH
Sbjct: 255 QMGFHHR 261


>sp|RL3_THEGJ|LARGE ribosomal subunit protein uL3|Thermococcus gammatolerans (strain

Query: 3 QTGFHHE 9
Q GFHH
Sbjct: 255 QMGFHHR 261


>sp|RL3_THEKO|LARGE ribosomal subunit protein uL3|Thermococcus kodakarensis (strain

Query: 3 QTGFHHE 9
Q GFHH
Sbjct: 255 QMGFHHR 261


>sp|Y1404_METJA|UNCHARACTERIZED protein MJ1404|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QTGFHH 8
+ GFHH
Sbjct: 35 ENGFHH 40


>sp|EF1B_NANEQ|ELONGATION factor 1-beta|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 VPQTGFHHEK 10
+P+T F+ E+
Sbjct: 50 IPETSFNEEQ 59




142|Sequence|706|715|FHHEKSDLLI

>sp|ABLB_METMA|BETA-LYSINE N(6)-acetyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FHHEKSDLLI 10
FH EK D +I
Sbjct: 73 FHKEKEDRII 82


>sp|HIS5_SULAC|IMIDAZOLE glycerol phosphate synthase subunit|Sulfolobus acidocaldarius

Query: 1 FHHEKSDLL 9
FH EKS L+
Sbjct: 177 FHPEKSSLV 185


>sp|SRP54_STAMF|SIGNAL recognition particle 54 kDa|Staphylothermus marinus (strain ATCC

Query: 2 HHEKSDLL 9
HH + DLL
Sbjct: 191 HHREEDLL 198


>sp|RF1_HALVD|PEPTIDE chain release factor subunit|Haloferax volcanii (strain ATCC 29605

Query: 1 FHHEKSDLLI 10
HHE DL++
Sbjct: 243 LHHELQDLVV 252


>sp|ABLA_METMA|L-LYSINE 2,3-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HHEKSDLLI 10
HHE D+L+
Sbjct: 161 HHEVRDVLL 169


>sp|DP2S_METTH|DNA polymerase II small subunit|Methanothermobacter thermautotrophicus

Query: 3 HEKSDLLI 10
HE+SDL++
Sbjct: 382 HERSDLIM 389


>sp|Y1383_THEVO|MEMO1 family protein TV1383|Thermoplasma volcanium (strain ATCC 51530

Query: 2 HHEKSDLL 9
H+E+SD++
Sbjct: 182 HYERSDIV 189


>sp|Y988_METJA|UNCHARACTERIZED protein MJ0988|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HHEKSDL 8
HH+K+DL
Sbjct: 106 HHKKTDL 112




143|Sequence|711|720|SDLLILDFGT

>sp|KAE1B_METJA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 DLLILDFG 9
DL I+DFG
Sbjct: 462 DLYIIDFG 469


>sp|PRIS_SULAC|DNA primase small subunit PriS|Sulfolobus acidocaldarius (strain ATCC

Query: 2 DLLILDFG 9
D+LI DFG
Sbjct: 152 DILIQDFG 159


>sp|VPB18_ARCFU|PUTATIVE antitoxin VapB18|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DLLILDFGT 10
DLL++ FGT
Sbjct: 39 DLLMVAFGT 47


>sp|PRIS_NATPD|DNA primase small subunit PriS|Natronomonas pharaonis (strain ATCC

Query: 2 DLLILDFG 9
DLL+ DFG
Sbjct: 132 DLLVEDFG 139


>sp|CCA_HALMA|CCA-ADDING enzyme|Haloarcula marismortui (strain ATCC 43049

Query: 1 SDLLILDFG 9
++LL+L+FG
Sbjct: 184 TELLVLEFG 192


>sp|RAD50_METTH|DNA double-strand break repair Rad50|Methanothermobacter

Query: 1 SDLLILD 7
SD+LILD
Sbjct: 773 SDILILD 779


>sp|Y2048_ARCFU|UNCHARACTERIZED protein AF_2048|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SDLLILDFG 9
S ++I+DFG
Sbjct: 107 SQVMIVDFG 115


>sp|DNAK_THEAC|CHAPERONE protein DnaK|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DLLILDFG 9
D+ I+DFG
Sbjct: 181 DVTIMDFG 188


>sp|DNAK_PICTO|CHAPERONE protein DnaK|Picrophilus torridus (strain ATCC 700027

Query: 2 DLLILDFG 9
D+ I+DFG
Sbjct: 181 DVTIMDFG 188


>sp|DPHB_METM5|DIPHTHINE synthase|Methanococcus maripaludis (strain C5 /

Query: 2 DLLILDFGT 10
DL+ DFGT
Sbjct: 221 DLINYDFGT 229


>sp|DPHB_METM7|DIPHTHINE synthase|Methanococcus maripaludis (strain C7 /

Query: 2 DLLILDFGT 10
DL+ DFGT
Sbjct: 221 DLINYDFGT 229




144|Sequence|716|725|LDFGTFQLNS

>sp|OTC_METMA|ORNITHINE carbamoyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DFGTFQLNS 10
DFG+FQ+N+
Sbjct: 238 DFGSFQVNT 246


>sp|OTC_METBF|ORNITHINE carbamoyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 DFGTFQLNS 10
+F TFQ+N+
Sbjct: 238 EFATFQVNT 246


>sp|SODF_METTM|SUPEROXIDE dismutase [Fe]|Methanothermobacter marburgensis (strain ATCC

Query: 2 DFGTFQ 7
DFG+FQ
Sbjct: 106 DFGSFQ 111


>sp|PUR5_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LDFGTFQL 8
LDFG F L
Sbjct: 50 LDFGNFYL 57


>sp|PUR5_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 LDFGTFQL 8
LDFG F L
Sbjct: 49 LDFGNFYL 56


>sp|OTC_METS3|ORNITHINE carbamoyltransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 DFGTFQLNS 10
DF +Q+NS
Sbjct: 237 DFAPYQVNS 245


>sp|MNTP_METTH|MANGANESE exporter MntP|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LDFGTFQ 7
L FGTFQ
Sbjct: 41 LSFGTFQ 47


>sp|MCH_HALSA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LDFGTFQLNS 10
LD G F+L++
Sbjct: 22 LDIGAFELDT 31


>sp|MCH_HALS3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LDFGTFQLNS 10
LD G F+L++
Sbjct: 22 LDIGAFELDT 31




145|Sequence|721|730|FQLNSKDQGL

>sp|TRPF_METVS|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus vannielii (strain ATCC 35089

Query: 4 NSKDQGL 10
NSKD+GL
Sbjct: 189 NSKDEGL 195


>sp|RACD_THEK8|ASPARTATE racemase|Thermococcus sp. (strain KS-8)

Query: 4 NSKDQGL 10
N KDQGL
Sbjct: 150 NKKDQGL 156


>sp|Y979_METJA|UNCHARACTERIZED protein MJ0979|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LNSKDQGL 10
LNS D GL
Sbjct: 133 LNSSDSGL 140




146|Sequence|726|735|KDQGLQKTTN

>sp|KUP_METAC|PROBABLE potassium transport system protein|Methanosarcina acetivorans

Query: 1 KDQGLQKTT 9
KD+G+Q+ T
Sbjct: 547 KDKGIQEKT 555


>sp|FLAB5_PYRHO|FLAGELLIN B5|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KDQGLQ 6
KDQGLQ
Sbjct: 114 KDQGLQ 119




147|Sequence|731|740|QKTTNSSLEE

***** No hits found ******


148|Sequence|736|745|SSLEEIMDKA

>sp|GFCR_METLZ|TRANSCRIPTIONAL regulator GfcR|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 SSLEEIMDKA 10
SSLEE+M KA
Sbjct: 2 SSLEELMAKA 11


>sp|RL3_AERPE|LARGE ribosomal subunit protein uL3|Aeropyrum pernix (strain ATCC 700893

Query: 2 SLEEIMDKA 10
SLEE +DKA
Sbjct: 133 SLEERLDKA 141


>sp|Y1062_PYRAB|UNCHARACTERIZED protein PYRAB10620|Pyrococcus abyssi (strain GE5 /

Query: 2 SLEEIMDKA 10
S+EEI+D+A
Sbjct: 26 SIEEILDRA 34


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LEEIMDK 9
LEEIMDK
Sbjct: 1584 LEEIMDK 1590


>sp|DHYS_THEKO|PROBABLE deoxyhypusine synthase|Thermococcus kodakarensis (strain ATCC

Query: 1 SSLEEIMD 8
SSLEE++D
Sbjct: 29 SSLEEVLD 36


>sp|DHYS_THEGJ|PROBABLE deoxyhypusine synthase|Thermococcus gammatolerans (strain DSM

Query: 1 SSLEEIMD 8
SSLEE++D
Sbjct: 29 SSLEEVLD 36


>sp|YI48_METSM|INSERTION element ISM1 uncharacterized 48.3|Methanobrevibacter smithii

Query: 3 LEEIMDK 9
L+EIMDK
Sbjct: 123 LQEIMDK 129


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SSLEEIMDKA 10
S+LEE M+KA
Sbjct: 809 STLEEDMEKA 818


>sp|PYRB_METS3|ASPARTATE carbamoyltransferase catalytic subunit|Methanobrevibacter smithii

Query: 2 SLEEIMDKA 10
S+EEI+DK
Sbjct: 217 SIEEIIDKV 225


>sp|COFH2_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina barkeri (strain

Query: 2 SLEEIMDKA 10
S+EEI++KA
Sbjct: 85 SVEEILEKA 93


>sp|COFH1_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina acetivorans (strain

Query: 2 SLEEIMDK 9
S+EEIM+K
Sbjct: 82 SIEEIMEK 89


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LEEIMDK 9
LEEIMD+
Sbjct: 1680 LEEIMDR 1686


>sp|COFH1_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina mazei (strain ATCC

Query: 2 SLEEIMDK 9
S+EEIM+K
Sbjct: 82 SIEEIMEK 89


>sp|COFH1_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina barkeri (strain

Query: 2 SLEEIMDK 9
S+EEIM+K
Sbjct: 82 SIEEIMEK 89


>sp|SYR_PYRAR|ARGININE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 SLEEIMDKA 10
SL+EI+D+A
Sbjct: 450 SLDEILDEA 458


>sp|COFH2_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina mazei (strain ATCC

Query: 2 SLEEIMDKA 10
S+EEI+ KA
Sbjct: 85 SIEEILKKA 93


>sp|SYR_PYRIL|ARGININE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 SLEEIMDKA 10
SL+EI+D+A
Sbjct: 450 SLDEILDEA 458


>sp|SYR_PYRAE|ARGININE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 SLEEIMDKA 10
SL+EI+D+A
Sbjct: 450 SLDEILDEA 458


>sp|SPEH_ARCFU|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SSLEEIMDKA 10
S +EE++DKA
Sbjct: 27 SIVEEVVDKA 36


>sp|IDI2_METJA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EEIMDKA 10
EEI+DKA
Sbjct: 140 EEIIDKA 146




149|Sequence|741|750|IMDKAYDKFD

>sp|HISX_METMP|HISTIDINOL dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 2 MDKAYDKFD 10
+DKAYDK D
Sbjct: 69 IDKAYDKID 77


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 IMDKAYDKFD 10
I DKA D+FD
Sbjct: 8803 IEDKAMDRFD 8812


>sp|TRPB1_ARCFU|TRYPTOPHAN synthase beta chain 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 MDKAYDKF 9
++KAYD+F
Sbjct: 35 LEKAYDRF 42


>sp|KAE1B_METM6|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 IMDKAYDKFD 10
IM YDKFD
Sbjct: 501 IMSIHYDKFD 510


>sp|KAE1B_METM5|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 IMDKAYDKFD 10
IM YDKFD
Sbjct: 503 IMSIHYDKFD 512


>sp|RTCB_METTH|TRNA-SPLICING ligase RtcB|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 IMDKAYDKF 9
+MDKAY ++
Sbjct: 253 LMDKAYRRY 261


>sp|DHQS_METKA|3-DEHYDROQUINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 IMDKAYDKF 9
I+DK Y++F
Sbjct: 122 ILDKPYERF 130


>sp|KAE1B_METMP|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 IMDKAYDKFD 10
IM YDKFD
Sbjct: 506 IMSIHYDKFD 515


>sp|Y1428_METJA|TPR repeat-containing protein MJ1428|Methanocaldococcus jannaschii

Query: 2 MDKAYDKFD 10
+DKAYD F+
Sbjct: 166 IDKAYDAFN 174


>sp|KAE1B_METM7|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 IMDKAYDKFD 10
IM YDKFD
Sbjct: 505 IMSIHYDKFD 514


>sp|METAA_METAX|HOMOSERINE O-acetyltransferase|Methanomethylophilus alvi (strain Mx1201)

Query: 2 MDKAYDKFD 10
+D+ YD+FD
Sbjct: 85 LDRFYDRFD 93


>sp|AATA3_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 IMDKAYDKFD 10
+M A+D+FD
Sbjct: 503 LMQYAFDEFD 512


>sp|TOP6A_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 IMDKAYDKFD 10
+ +KAY KFD
Sbjct: 195 VQEKAYKKFD 204


>sp|RNJL_SACS2|RNASE aCSPSF2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IMDKAYDKFD 10
++ KAYD F+
Sbjct: 343 LLKKAYDNFN 352


>sp|FAU1_THEGJ|PROBABLE ribonuclease FAU-1|Thermococcus gammatolerans (strain DSM 15229

Query: 2 MDKAYDKFD 10
++K YD+FD
Sbjct: 43 IEKTYDEFD 51


>sp|FAU1_THEKO|PROBABLE ribonuclease FAU-1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 MDKAYDKFD 10
++K YD FD
Sbjct: 43 LEKTYDDFD 51


>sp|ARNS_SULAC|SERINE/THREONINE-PROTEIN kinase ArnS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 MDKAYDKF 9
+DKA+D++
Sbjct: 555 LDKAFDEY 562


>sp|Y1002_PYRHO|UPF0282 protein PH1002|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IMDKAYDKF 9
I DK Y++F
Sbjct: 247 IRDKGYERF 255


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 MDKAYD 7
+DKAYD
Sbjct: 296 LDKAYD 301


>sp|SYT_NANEQ|THREONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 IMDKAYD 7
++DKAYD
Sbjct: 95 VLDKAYD 101


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 MDKAYD 7
+DKAYD
Sbjct: 291 LDKAYD 296


>sp|HIS8_PYRFU|HISTIDINOL-PHOSPHATE aminotransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IMDKAYDKF 9
I+D+AY +F
Sbjct: 173 ILDEAYSEF 181


>sp|Y976_METJA|UNCHARACTERIZED protein MJ0976|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IMDKAYDKFD 10
I+ K Y KFD
Sbjct: 115 IIPKRYSKFD 124


>sp|Y114_METJA|UNCHARACTERIZED protein MJ0114|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MDKAYDKF 9
M+K Y KF
Sbjct: 1 MEKVYSKF 8


>sp|PSTK_METJA|L-SERYL-TRNA(SEC) kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IMDKAYDKFD 10
++ K Y+KFD
Sbjct: 124 VIKKMYEKFD 133




150|Sequence|746|755|YDKFDVEIKN

>sp|METE_AERPE|METHIONINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 DKFDVEIKN 10
D+FD+E+KN
Sbjct: 236 DQFDLEMKN 244


>sp|RU1PA_HALXS|RIBULOSE-1-PHOSPHATE aldolase|Halopiger xanaduensis (strain DSM 18323

Query: 1 YDKFDVE 7
YD FDVE
Sbjct: 54 YDGFDVE 60


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 2 DKFDVEIKN 10
DK D++I+N
Sbjct: 986 DKLDLQIRN 994


>sp|Y763_METJA|UNCHARACTERIZED protein MJ0763|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DKFDVEIKN 10
D FDVE+KN
Sbjct: 37 DLFDVEMKN 45


>sp|HDRA_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 1 YDKFDVEIK 9
YD+FD +K
Sbjct: 329 YDEFDATLK 337


>sp|FAU1_THEGJ|PROBABLE ribonuclease FAU-1|Thermococcus gammatolerans (strain DSM 15229

Query: 1 YDKFDVEI 8
YD+FDV+I
Sbjct: 47 YDEFDVDI 54


>sp|Y277_SULAC|UPF0282 protein Saci_0277|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DKFDVEIKN 10
D+ D EIKN
Sbjct: 214 DELDTEIKN 222


>sp|AROA_METS3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 3 KFDVEIKN 10
K D+EIKN
Sbjct: 406 KHDIEIKN 413


>sp|TDXH2_PICTO|PEROXIREDOXIN 2|Picrophilus torridus (strain ATCC 700027

Query: 1 YDKFDVEIK 9
Y+KF +EI+
Sbjct: 84 YEKFGIEIQ 92


>sp|HELS_PYRCJ|ATP-DEPENDENT DNA helicase Hel308|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 YDKFDV 6
Y+KFDV
Sbjct: 586 YEKFDV 591


>sp|RAD50_SACS2|DNA double-strand break repair Rad50|Saccharolobus solfataricus (strain

Query: 3 KFDVEIKN 10
KFD+ IKN
Sbjct: 733 KFDLSIKN 740


>sp|ATGT_ARCFU|TRNA-GUANINE(15) transglycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 DVEIKN 10
DVEIKN
Sbjct: 98 DVEIKN 103


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 YDKFDVEIK 9
YD+ D E+K
Sbjct: 658 YDRTDAEVK 666


>sp|KTHY_METKA|PROBABLE thymidylate kinase|Methanopyrus kandleri (strain AV19 /

Query: 2 DKFDVEIK 9
++FDVEIK
Sbjct: 150 EEFDVEIK 157


>sp|FAU1_THEKO|PROBABLE ribonuclease FAU-1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YDKFDVEI 8
YD FDV+I
Sbjct: 47 YDDFDVDI 54


>sp|KAE1B_METM6|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 YDKFDV 6
YDKFD+
Sbjct: 506 YDKFDL 511




151|Sequence|751|760|VEIKNVQLLF

>sp|FWDC_METTM|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 2 EIKNVQLLF 10
EIKN+Q+++
Sbjct: 33 EIKNIQIMY 41


>sp|FWDC_METWO|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 2 EIKNVQLL 9
EIKN+Q++
Sbjct: 33 EIKNIQIM 40


>sp|Y1094_METJA|UNCHARACTERIZED protein MJ1094|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VEIKNVQLL 9
VEIKN+Q L
Sbjct: 32 VEIKNIQHL 40


>sp|GATE_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfurisphaera tokodaii (strain DSM

Query: 1 VEIKNVQLL 9
EIK VQLL
Sbjct: 236 TEIKGVQLL 244


>sp|MCH_METJA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VEIKNVQLL 9
VE++NV LL
Sbjct: 161 VEVENVYLL 169


>sp|CCA_METM7|CCA-ADDING enzyme|Methanococcus maripaludis (strain C7 /

Query: 4 KNVQLLF 10
KN+Q+LF
Sbjct: 404 KNIQILF 410


>sp|CCA_METM5|CCA-ADDING enzyme|Methanococcus maripaludis (strain C5 /

Query: 4 KNVQLLF 10
KN+Q+LF
Sbjct: 404 KNIQILF 410




152|Sequence|756|765|VQLLFARAEE

>sp|HIS1_HALWD|ATP phosphoribosyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VQLLFARAEE 10
V+LLFARA +
Sbjct: 43 VRLLFARAAD 52


>sp|HIS5_PYRFU|IMIDAZOLE glycerol phosphate synthase subunit|Pyrococcus furiosus (strain

Query: 1 VQLLFARAEE 10
+QLLF +EE
Sbjct: 77 MQLLFEESEE 86


>sp|HIS1_HALLT|ATP phosphoribosyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 1 VQLLFARAEE 10
V +LFARA +
Sbjct: 43 VSILFARAAD 52


>sp|SPEE1_HYPBU|POLYAMINE aminopropyltransferase 1|Hyperthermus butylicus (strain DSM 5456

Query: 1 VQLLFARAEE 10
V+ LFA AEE
Sbjct: 216 VKSLFAHAEE 225


>sp|RL11_THEGJ|LARGE ribosomal subunit protein uL11|Thermococcus gammatolerans (strain

Query: 4 LFARAEE 10
LFA+AEE
Sbjct: 157 LFAKAEE 163


>sp|RL11_THEKO|LARGE ribosomal subunit protein uL11|Thermococcus kodakarensis (strain

Query: 4 LFARAEE 10
LFA+AEE
Sbjct: 157 LFAKAEE 163


>sp|RNP4_METMJ|RIBONUCLEASE P protein component 4|Methanoculleus marisnigri (strain ATCC

Query: 1 VQLLFARAEE 10
+ +LFARA E
Sbjct: 18 IAVLFARAAE 27




153|Sequence|761|770|ARAEETWKKC

>sp|Y403_METJA|MEMO1 family protein MJ0403|Methanocaldococcus jannaschii (strain ATCC

Query: 4 EETWKKC 10
EE W+KC
Sbjct: 119 EELWRKC 125


>sp|FEN_METMJ|FLAP endonuclease 1|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 ARAEETWK 8
ARA+E WK
Sbjct: 100 ARADEAWK 107


>sp|PGK_METLZ|PHOSPHOGLYCERATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 ARAEETWKK 9
A EE+WKK
Sbjct: 394 AALEESWKK 402


>sp|RADB_THEGJ|DNA repair and recombination protein|Thermococcus gammatolerans (strain

Query: 2 RAEETWK 8
RAEE W+
Sbjct: 119 RAEEDWR 125


>sp|AAT_PYRHO|ASPARTATE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RAEETWK 8
R+EE+WK
Sbjct: 282 RSEESWK 288


>sp|Y632_METM7|MEMO1 family protein MmarC7_0632|Methanococcus maripaludis (strain C7 /

Query: 3 AEETWKKC 10
A++ WK+C
Sbjct: 115 ADKLWKEC 122


>sp|Y1286_METM6|MEMO1 family protein MmarC6_1286|Methanococcus maripaludis (strain C6 /

Query: 3 AEETWKKC 10
A++ WK+C
Sbjct: 115 ADKLWKEC 122


>sp|RS5_NATPD|SMALL ribosomal subunit protein uS5|Natronomonas pharaonis (strain ATCC

Query: 1 ARAEETWKKC 10
A E+ W KC
Sbjct: 163 AGVEDAWTKC 172


>sp|SAHH_PYRFU|ADENOSYLHOMOCYSTEINASE furiosus (strain ATCC 43587

Query: 3 AEETWKKC 10
AEE WKK
Sbjct: 15 AEEGWKKI 22


>sp|RL13_PYRIL|LARGE ribosomal subunit protein uL13|Pyrobaculum islandicum (strain DSM

Query: 2 RAEETWKK 9
RA+E W+K
Sbjct: 170 RAQEIWQK 177




154|Sequence|766|775|TWKKCRFQHP

>sp|Y666_METKA|UPF0305 protein MK0666|Methanopyrus kandleri (strain AV19 /

Query: 2 WKKCRFQHP 10
W++ RF HP
Sbjct: 7 WRQARFVHP 15


>sp|KAE1B_METST|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 TWKKCRFQH 9
TW K FQH
Sbjct: 323 TWIKDNFQH 331


>sp|SYW_METAC|TRYPTOPHAN--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TWKKCR 6
+W+KCR
Sbjct: 115 SWQKCR 120


>sp|SYW_METMA|TRYPTOPHAN--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TWKKCR 6
+W+KCR
Sbjct: 115 SWQKCR 120


>sp|HUTI_PYRAR|IMIDAZOLONEPROPIONASE arsenaticum (strain DSM 13514

Query: 1 TWKKCRFQHP 10
TW++ + +HP
Sbjct: 43 TWEEIKRRHP 52


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TWKKCRF 7
+W CRF
Sbjct: 580 SWNACRF 586


>sp|SYFA_THESM|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus sibiricus (strain DSM 12597

Query: 2 WKKCRFQH 9
WK F+H
Sbjct: 218 WKNVEFKH 225




155|Sequence|771|780|RFQHPSTMHI

>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 4 HPSTMHI 10
HP+TMHI
Sbjct: 374 HPATMHI 380


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 4 HPSTMHI 10
HP+TMH+
Sbjct: 360 HPATMHL 366


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 4 HPSTMHI 10
HP+TMH+
Sbjct: 363 HPATMHL 369


>sp|HIS8_SULTO|HISTIDINOL-PHOSPHATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RFQHPSTM 8
R+QHPS +
Sbjct: 58 RYQHPSLL 65


>sp|Y3511_METJA|UNCHARACTERIZED protein MJECL11|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FQHPSTMHI 10
F HPS++ I
Sbjct: 31 FHHPSSLEI 39


>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 4 HPSTMH 9
HPST H
Sbjct: 337 HPSTQH 342


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 4 HPSTMHI 10
HP+ MH+
Sbjct: 371 HPAAMHL 377


>sp|EF1A_META3|ELONGATION factor 1-alpha|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 FQHPSTMHI 10
QHPS M +
Sbjct: 329 LQHPSVMTV 337


>sp|EF1A_METMP|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain DSM 14266

Query: 2 FQHPSTMHI 10
QHPS M +
Sbjct: 329 LQHPSVMTV 337


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 4 HPSTMHI 10
HP+TM I
Sbjct: 339 HPATMEI 345


>sp|EF1A_METM5|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C5 /

Query: 2 FQHPSTMHI 10
QHPS M +
Sbjct: 329 LQHPSVMTV 337


>sp|EF1A_METM7|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C7 /

Query: 2 FQHPSTMHI 10
QHPS M +
Sbjct: 329 LQHPSVMTV 337


>sp|EF1A_METM6|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C6 /

Query: 2 FQHPSTMHI 10
QHPS M +
Sbjct: 329 LQHPSVMTV 337


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 HPSTMHI 10
HP+TM+I
Sbjct: 27 HPNTMNI 33


>sp|Y1499_ARCFU|UNCHARACTERIZED protein AF_1499|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FQHPSTMHI 10
F H TMH+
Sbjct: 23 FPHWETMHV 31


>sp|RS27_ARCFU|SMALL ribosomal subunit protein eS27|Archaeoglobus fulgidus (strain

Query: 2 FQHPSTM 8
F HPST+
Sbjct: 20 FDHPSTI 26




156|Sequence|776|785|STMHILQPMD

>sp|HEM12_PYRCJ|GLUTAMYL-TRNA reductase 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 STMHILQPM 9
S++H LQP+
Sbjct: 238 SSVHTLQPV 246


>sp|FLPA_METMZ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanosarcina mazei

Query: 1 STMHILQPMD 10
S HI++P+D
Sbjct: 131 SYAHIVEPVD 140


>sp|LEUD_SACS2|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus solfataricus (strain ATCC

Query: 4 HILQPMD 10
H+++P+D
Sbjct: 36 HVMEPLD 42


>sp|LEUD_SACI7|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 4 HILQPMD 10
H+++P+D
Sbjct: 36 HVMEPLD 42


>sp|LEUD_SACI2|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 4 HILQPMD 10
H+++P+D
Sbjct: 36 HVMEPLD 42


>sp|LEUD_SACI1|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 4 HILQPMD 10
H+++P+D
Sbjct: 36 HVMEPLD 42


>sp|FLPA_METMA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanosarcina mazei (strain ATCC

Query: 1 STMHILQPMD 10
S HI++P+D
Sbjct: 131 SYAHIVEPVD 140


>sp|FLPA_METAC|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanosarcina acetivorans (strain

Query: 1 STMHILQPMD 10
S HI++P+D
Sbjct: 131 SYAHIVEPVD 140




157|Sequence|781|790|LQPMDIHVEL

>sp|ASD_METJA|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanocaldococcus

Query: 1 LQPMDIHV 8
+ P+D+HV
Sbjct: 84 MSPLDVHV 91


>sp|ASD_METKA|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanopyrus kandleri

Query: 1 LQPMDIHV 8
+ P+D+HV
Sbjct: 93 MSPLDVHV 100


>sp|MVK_METTH|MEVALONATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 PMDIHVEL 10
P+DI VE+
Sbjct: 80 PLDIRVEM 87


>sp|THSA_ARCFU|THERMOSOME subunit alpha|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LQPMDIHVEL 10
L P+DI VEL
Sbjct: 457 LDPIDILVEL 466


>sp|THSB_ARCFU|THERMOSOME subunit beta|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LQPMDIHVEL 10
L P+D+ VEL
Sbjct: 457 LDPIDVLVEL 466


>sp|ASD_METTH|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanothermobacter

Query: 1 LQPMDIHV 8
+ P D+HV
Sbjct: 96 MSPFDVHV 103


>sp|GCH1L_PYRAB|GTP cyclohydrolase 1 type 2|Pyrococcus abyssi (strain GE5 /

Query: 3 PMDIHVEL 10
P+D+H E+
Sbjct: 98 PLDVHPEV 105




158|Sequence|786|795|IHVELAKAMV

>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii

Query: 2 HVELAKAMV 10
H+ELAK ++
Sbjct: 78 HIELAKPVI 86


>sp|RADB_PYRAB|DNA repair and recombination protein|Pyrococcus abyssi (strain GE5 /

Query: 2 HVELAKAM 9
HVELAK +
Sbjct: 127 HVELAKQL 134


>sp|LYSJ_AERPE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 IHVELAKAM 9
I+ ELAKA+
Sbjct: 189 IYAELAKAL 197


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HVELAKAMV 10
HVE+AK ++
Sbjct: 1546 HVEIAKKLM 1554




159|Sequence|791|800|AKAMVEKDIR

>sp|HEM1_META3|GLUTAMYL-TRNA reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 AKAMVEKDIR 10
AKA++EK+IR
Sbjct: 170 AKALIEKNIR 179


>sp|HEM1_METMA|GLUTAMYL-TRNA reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AKAMVEKDI 9
AKA+ EKDI
Sbjct: 189 AKALAEKDI 197


>sp|HEM1_METAC|GLUTAMYL-TRNA reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 AKAMVEKDI 9
AKA+ EKDI
Sbjct: 189 AKALAEKDI 197


>sp|HEM1_METM7|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C7 /

Query: 1 AKAMVEKDIR 10
AKA+VEK I+
Sbjct: 173 AKALVEKHIK 182


>sp|Y605_METJA|PUTATIVE toxin MJ0605|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KAMVEKDIR 10
KA++ KDIR
Sbjct: 2 KALLNKDIR 10


>sp|HEM1_METVS|GLUTAMYL-TRNA reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 AKAMVEKDIR 10
AKA++EK I+
Sbjct: 172 AKALIEKHIK 181


>sp|HEM1_METM5|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C5 /

Query: 1 AKAMVEKDIR 10
AKA++EK I+
Sbjct: 173 AKALIEKHIK 182


>sp|HEM1_METM6|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C6 /

Query: 1 AKAMVEKDIR 10
AKA++EK I+
Sbjct: 173 AKALLEKHIK 182




160|Sequence|796|805|EKDIRMARFK

>sp|SYFB_SULAC|PHENYLALANINE--TRNA ligase beta subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EKDIRMARF 9
EK +RMARF
Sbjct: 295 EKYLRMARF 303


>sp|TRPE_THEKO|ANTHRANILATE synthase component 1|Thermococcus kodakarensis (strain ATCC

Query: 1 EKDIRMARF 9
EKD R ARF
Sbjct: 31 EKDSRKARF 39


>sp|RAD50_METJA|DNA double-strand break repair Rad50|Methanocaldococcus jannaschii

Query: 2 KDIRMARFK 10
K+IRM FK
Sbjct: 6 KEIRMNNFK 14


>sp|CDVB3_SULAC|CELL division protein B3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 DIRMARFK 10
DIRMA++K
Sbjct: 12 DIRMAKYK 19




161|Sequence|801|810|MARFKVSGGL

>sp|AROK_AERPE|SHIKIMATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 MARFKVSGGL 10
MAR + SGGL
Sbjct: 1 MARARASGGL 10


>sp|FDHD_SULTO|SULFUR carrier protein FdhD|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 FKVSGGL 10
FK++GGL
Sbjct: 142 FKITGGL 148


>sp|COBD_PYRHO|PROBABLE cobalamin biosynthesis protein CobD|Pyrococcus horikoshii (strain

Query: 1 MARFKVS 7
MARFKV+
Sbjct: 219 MARFKVN 225


>sp|RS3A_METLZ|SMALL ribosomal subunit protein eS1|Methanocorpusculum labreanum

Query: 1 MARFKVSGG 9
MAR K SGG
Sbjct: 1 MARKKQSGG 9


>sp|MOAA_PYRAE|PROBABLE GTP 3',8-cyclase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 MARFKVSGG 9
+A FK++GG
Sbjct: 58 VADFKITGG 66


>sp|RL15E_METMA|LARGE ribosomal subunit protein eL15|Methanosarcina mazei (strain ATCC

Query: 1 MARFKVSGGL 10
M + KVSGG+
Sbjct: 87 MGKNKVSGGM 96


>sp|RL15E_METAC|LARGE ribosomal subunit protein eL15|Methanosarcina acetivorans (strain

Query: 1 MARFKVSGGL 10
M + KVSGG+
Sbjct: 87 MGKNKVSGGM 96




162|Sequence|806|815|VSGGLPLMHV

>sp|QUEE_METAC|7-CARBOXY-7-DEAZAGUANINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VSGGLPLMH 9
++GG PL+H
Sbjct: 92 LTGGEPLLH 100


>sp|QUEE_HALS3|7-CARBOXY-7-DEAZAGUANINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VSGGLPLMH 9
++GG PL+H
Sbjct: 89 LTGGEPLLH 97


>sp|RIBB_ARCFU|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GLPLMH 9
GLP MH
Sbjct: 68 GLPFMH 73


>sp|CAS4_SACS2|CRISPR-ASSOCIATED exonuclease Cas4|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 GLPLMH 9
GLPL+H
Sbjct: 122 GLPLIH 127


>sp|FLAB5_THEKO|FLAGELLIN B5|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 SGGLPLMHV 10
SGG+ L HV
Sbjct: 86 SGGIDLAHV 94


>sp|AGOG_AERPE|N-GLYCOSYLASE/DNA lyase|Aeropyrum pernix (strain ATCC 700893

Query: 2 SGGLPLMHV 10
S G+P++H+
Sbjct: 229 SSGIPVLHI 237


>sp|SYS_CENSY|SERINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 VSGGLPLMH 9
+ GGLPL +
Sbjct: 242 IEGGLPLRY 250


>sp|CBIA_SULTO|COBYRINATE a,c-diamide synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VSGGLPLMHV 10
V GG P +H+
Sbjct: 288 VGGGYPELHL 297


>sp|ORNAT_THEKO|ORNITHINE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VSGGLPLMHV 10
+ GGLPL V
Sbjct: 294 IGGGLPLAGV 303


>sp|LYSJ_PYRAE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 VSGGLPL 7
V+GGLP+
Sbjct: 240 VAGGLPI 246


>sp|FLAB5_PYRHO|FLAGELLIN B5|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SGGLPLMHV 10
SGG+ L HV
Sbjct: 86 SGGIDLAHV 94


>sp|NIFK_METTM|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter

Query: 4 GLPLMH 9
GLPL+H
Sbjct: 36 GLPLVH 41




163|Sequence|811|820|PLMHVRISDQ

>sp|Y903_METJA|UNCHARACTERIZED protein MJ0903|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PLMHVRISDQ 10
P++HV IS+Q
Sbjct: 40 PILHVDISEQ 49


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 PLMHVRISD 9
PL HVR+ +
Sbjct: 863 PLTHVRLKE 871




164|Sequence|816|825|RISDQKMKDV

>sp|Y525_THESM|DNA-BINDING protein TSIB_0525|Thermococcus sibiricus (strain DSM 12597

Query: 1 RISDQKMKDV 10
RI+D+K+K +
Sbjct: 87 RITDEKLKRI 96


>sp|AMYA_METJA|PUTATIVE alpha-amylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RISDQKMKDV 10
RIS +K+KD+
Sbjct: 313 RISFEKLKDI 322




165|Sequence|821|830|KMKDVLYLMN

>sp|GYAR_THEPD|GLYOXYLATE reductase|Thermofilum pendens (strain DSM 2475

Query: 1 KMKDVLYLMN 10
KMK YL+N
Sbjct: 229 KMKKTAYLIN 238


>sp|ATRMA_PYRHO|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 1 KMKDVLYLMN 10
K+ DV+YL++
Sbjct: 238 KLDDVIYLIH 247


>sp|NURA_SACS2|DNA double-strand break repair nuclease|Saccharolobus solfataricus

Query: 1 KMKDVLYLMN 10
KM+D+L L+N
Sbjct: 173 KMRDLLMLLN 182




166|Sequence|826|835|LYLMNSIPLP

>sp|GATE_THESM|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus sibiricus (strain DSM 12597

Query: 2 YLMNSIPL 9
YL+N+IP+
Sbjct: 106 YLLNAIPV 113


>sp|CBIA_METS3|COBYRINATE a,c-diamide synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LYLMNSI 7
+YLMNSI
Sbjct: 332 MYLMNSI 338


>sp|SEPS_METMP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 LMNSIPLP 10
LMN PLP
Sbjct: 198 LMNKKPLP 205


>sp|SEPS_METM7|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C7 /

Query: 3 LMNSIPLP 10
LMN PLP
Sbjct: 198 LMNKKPLP 205


>sp|SEPS_METM6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C6 /

Query: 3 LMNSIPLP 10
LMN PLP
Sbjct: 198 LMNKKPLP 205


>sp|SEPS_METM5|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C5 /

Query: 3 LMNSIPLP 10
LMN PLP
Sbjct: 198 LMNKKPLP 205


>sp|ENDA_METBF|TRNA-SPLICING endonuclease|Methanosarcina barkeri (strain Fusaro /

Query: 2 YLMNSIP 8
YL+N+IP
Sbjct: 300 YLVNAIP 306


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LYLMNSI 7
LYL+NSI
Sbjct: 29 LYLINSI 35


>sp|PIWI_ARCFU|PIWI protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YLMNSIP 8
YL+NSIP
Sbjct: 129 YLINSIP 135


>sp|ENDA_METBU|TRNA-SPLICING endonuclease|Methanococcoides burtonii (strain DSM 6242

Query: 2 YLMNSIPL 9
YL++SIP+
Sbjct: 301 YLIHSIPM 308


>sp|Y2025_ARCFU|UNCHARACTERIZED protein AF_2025|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LYLMNSIPLP 10
+Y++ S+PLP
Sbjct: 73 VYILLSMPLP 82


>sp|RL7A_PYRNV|LARGE ribosomal subunit protein eL8|Pyrobaculum neutrophilum (strain DSM

Query: 4 MNSIPLP 10
+N+IPLP
Sbjct: 142 LNAIPLP 148




167|Sequence|831|840|SIPLPQKSSA

>sp|TRM56_ARCFU|TRNA (cytidine(56)-2'-O)-methyltransferase|Archaeoglobus fulgidus

Query: 2 IPLPQK 7
IPLPQK
Sbjct: 84 IPLPQK 89


>sp|DPHB_METPE|DIPHTHINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 SIPLPQKS 8
S+P PQK+
Sbjct: 134 SVPFPQKN 141


>sp|Y330_METJA|UNCHARACTERIZED protein MJ0330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IPLPQK 7
IP+PQK
Sbjct: 31 IPIPQK 36




168|Sequence|836|845|QKSSAQSPER

>sp|R15PI_PYRAB|RIBOSE 1,5-bisphosphate isomerase|Pyrococcus abyssi (strain GE5 /

Query: 1 QKSSAQSPE 9
+KS+A+SPE
Sbjct: 40 EKSTAKSPE 48




169|Sequence|841|850|QSPERQVSSI

>sp|SURE_CALMQ|5'-NUCLEOTIDASE SurE|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 SPERQVSSI 10
+PE Q+SSI
Sbjct: 33 APETQLSSI 41




170|Sequence|846|855|QVSSIPIISG

>sp|OTC_METST|ORNITHINE carbamoyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 QVSSIPIISG 10
Q S+IPIISG
Sbjct: 110 QYSTIPIISG 119


>sp|PYRB_METLZ|ASPARTATE carbamoyltransferase catalytic subunit|Methanocorpusculum labreanum

Query: 1 QVSSIPIISG 10
+V+S+P+I+G
Sbjct: 116 EVASVPVING 125


>sp|FTR_METTH|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 QVSSIPIISG 10
++ SIPI+SG
Sbjct: 138 KIHSIPIMSG 147


>sp|OTC_STAMF|ORNITHINE carbamoyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 1 QVSSIPIISG 10
Q S +P+I+G
Sbjct: 121 QYSRVPVING 130


>sp|OTC_METS3|ORNITHINE carbamoyltransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 QVSSIPIISG 10
+ S +P+ISG
Sbjct: 110 KYSDVPVISG 119


>sp|Y860_PYRFU|UNCHARACTERIZED protein PF0860|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QVSSIPIISG 10
+VSSIP++ G
Sbjct: 201 RVSSIPVLVG 210


>sp|AMPD_METTH|ANHYDROMEVALONATE phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 3 SSIPIISG 10
S IP+ISG
Sbjct: 45 SDIPVISG 52


>sp|PYRB_METBF|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina barkeri

Query: 1 QVSSIPIISG 10
+ +S+PII+G
Sbjct: 119 EFASVPIING 128


>sp|PYRB_METPE|ASPARTATE carbamoyltransferase catalytic subunit|Methanosphaerula palustris

Query: 1 QVSSIPIISG 10
+VSS+P+I+
Sbjct: 112 EVSSVPVINA 121


>sp|PYRB_METAC|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina acetivorans

Query: 1 QVSSIPIISG 10
+ +S+P+I+G
Sbjct: 119 EFASVPVING 128


>sp|OTC_AERPE|ORNITHINE carbamoyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 3 SSIPIISG 10
+SIP+I+G
Sbjct: 124 ASIPVING 131


>sp|RL3_STAMF|LARGE ribosomal subunit protein uL3|Staphylothermus marinus (strain ATCC

Query: 3 SSIPIISG 10
S+IP++SG
Sbjct: 205 STIPVLSG 212




171|Sequence|851|860|PIISGGTKGL

>sp|DAPA_METST|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PIISGGTKGL 10
P+IS G+KG+
Sbjct: 199 PMISQGSKGV 208


>sp|DHYS_PICTO|PROBABLE deoxyhypusine synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 IISGGTKGL 10
IIS GT+G+
Sbjct: 65 IISTGTRGI 73


>sp|MFNA_METM5|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 2 IISGGTKG 9
IISGGT+
Sbjct: 82 IISGGTEA 89


>sp|MFNA_METM7|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 2 IISGGTKG 9
IISGGT+
Sbjct: 82 IISGGTEA 89


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 ISGGTKGL 10
I G TKGL
Sbjct: 737 IEGATKGL 744


>sp|ADHS1_ARCFU|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IISGGTKG 9
+++GG+KG
Sbjct: 191 VVAGGSKG 198


>sp|MFNA_META3|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus aeolicus

Query: 2 IISGGTKG 9
IISGGT+
Sbjct: 82 IISGGTEA 89


>sp|DAPA_METM7|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 PIISGGTKGL 10
PIIS G KG+
Sbjct: 190 PIISLGGKGV 199


>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 1 PIISGGT 7
P+I GGT
Sbjct: 240 PLIGGGT 246


>sp|DAPA_METM6|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 PIISGGTKGL 10
PIIS G KG+
Sbjct: 190 PIISLGGKGV 199


>sp|MTMB2_METAC|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina acetivorans (strain ATCC

Query: 1 PIISGGTKG 9
PI+ GG G
Sbjct: 124 PIVQGGPTG 132


>sp|MTMB2_METBA|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri

Query: 1 PIISGGTKG 9
PI+ GG G
Sbjct: 124 PIVQGGPTG 132


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 1 PIISGGTKG 9
PI+ GG G
Sbjct: 124 PIVQGGPTG 132


>sp|MTMB3_METBF|MONOMETHYLAMINE methyltransferase MtmB3|Methanosarcina barkeri (strain Fusaro /

Query: 1 PIISGGTKG 9
PI+ GG G
Sbjct: 124 PIVQGGPTG 132


>sp|MTMB2_METBF|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri (strain Fusaro /

Query: 1 PIISGGTKG 9
PI+ GG G
Sbjct: 124 PIVQGGPTG 132


>sp|MTMB1_METBF|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri (strain Fusaro /

Query: 1 PIISGGTKG 9
PI+ GG G
Sbjct: 124 PIVQGGPTG 132


>sp|MTMB1_METBA|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri

Query: 1 PIISGGTKG 9
PI+ GG G
Sbjct: 124 PIVQGGPTG 132


>sp|MTMB_METMA|MONOMETHYLAMINE methyltransferase MtmB|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PIISGGTKG 9
PI+ GG G
Sbjct: 124 PIVQGGPTG 132


>sp|YNI2_METTL|UNCHARACTERIZED protein in nifH2 3'region|Methanothermococcus

Query: 2 IISGGTKGL 10
++ GGT GL
Sbjct: 5 VVGGGTSGL 13




172|Sequence|856|865|GTKGLLGTSL

>sp|GYRA_HALWD|DNA gyrase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GTKGLLGTSL 10
G KG++GTSL
Sbjct: 547 GGKGIIGTSL 556


>sp|GYRA_HALL2|DNA gyrase subunit A|Haloferax lucentense (strain DSM 14919

Query: 1 GTKGLLGTSL 10
G KG++GT L
Sbjct: 547 GGKGIIGTDL 556


>sp|DNAG_METTP|DNA primase DnaG|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 TKGLLGTSL 10
T+GLLG+ L
Sbjct: 34 TEGLLGSDL 42


>sp|DNAG_META3|DNA primase DnaG|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 TKGLLGTSL 10
T+GLLG+ L
Sbjct: 35 TEGLLGSDL 43


>sp|DNAG_METBU|DNA primase DnaG|Methanococcoides burtonii (strain DSM 6242

Query: 2 TKGLLGTSL 10
T+GLLG+ L
Sbjct: 34 TEGLLGSDL 42


>sp|DNAG_CALMQ|DNA primase DnaG|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 TKGLLGTSL 10
T+GLLG+ L
Sbjct: 35 TEGLLGSDL 43


>sp|CAPPA_PYRAR|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GTKGLLG 7
GT+GL+G
Sbjct: 284 GTRGLVG 290


>sp|DNAG_METMA|DNA primase DnaG|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TKGLLGTSL 10
T+GLLG L
Sbjct: 34 TEGLLGADL 42


>sp|DNAG_METBF|DNA primase DnaG|Methanosarcina barkeri (strain Fusaro /

Query: 2 TKGLLGTSL 10
T+GLLG L
Sbjct: 34 TEGLLGADL 42


>sp|DNAG_METAR|DNA primase DnaG|Methanocella arvoryzae (strain DSM 22066

Query: 2 TKGLLGTSL 10
T+GLLG L
Sbjct: 34 TEGLLGADL 42


>sp|DNAG_METAC|DNA primase DnaG|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TKGLLGTSL 10
T+GLLG L
Sbjct: 34 TEGLLGADL 42




173|Sequence|861|870|LGTSLLLDTV

>sp|DNAJ_METTE|CHAPERONE protein DnaJ|Methanosarcina thermophila

Query: 1 LGTSLLLDTV 10
LGT +++DT+
Sbjct: 279 LGTDIMVDTL 288


>sp|MTD_METST|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosphaera

Query: 1 LGTSLLLDTV 10
+GTS+L+D +
Sbjct: 13 IGTSVLIDMI 22


>sp|AROE_CALMQ|SHIKIMATE dehydrogenase (NADP(+))|Caldivirga maquilingensis (strain ATCC

Query: 1 LGTSLLLD 8
LGT LLLD
Sbjct: 200 LGTMLLLD 207


>sp|ARLY_PYRFU|ARGININOSUCCINATE lyase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GTSLLLD 8
GTS+LLD
Sbjct: 196 GTSVLLD 202


>sp|PGK_METS5|PHOSPHOGLYCERATE kinase|Metallosphaera sedula (strain ATCC 51363

Query: 1 LGTSLLLDTV 10
LG+ LLLD V
Sbjct: 108 LGSVLLLDNV 117




174|Sequence|866|875|LLDTVESESD

>sp|GPGS_METBU|GLUCOSYL-3-PHOSPHOGLYCERATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LLDTVESESD 10
LLDT++SES+
Sbjct: 198 LLDTLQSESN 207


>sp|HISX_HALSA|HISTIDINOL dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LLDTVESESD 10
+LD VESE D
Sbjct: 34 ILDRVESEGD 43


>sp|NIFH_METMA|NITROGENASE iron protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LLDTVESESD 10
+LDT+ SE D
Sbjct: 56 VLDTLRSEGD 65


>sp|NIFH2_METBA|NITROGENASE iron protein 2|Methanosarcina barkeri

Query: 1 LLDTVESESD 10
+LDT+ SE D
Sbjct: 56 VLDTLRSEGD 65




175|Sequence|871|880|ESESDDEYFD

>sp|PYRB_CENSY|ASPARTATE carbamoyltransferase catalytic subunit|Cenarchaeum symbiosum

Query: 1 ESESDDEYFD 10
ESES DEY D
Sbjct: 210 ESESLDEYVD 219


>sp|CBID_SULTO|COBALT-PRECORRIN-5B C(1)-methyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 SDDEYFD 10
SDDEY +
Sbjct: 176 SDDEYLE 182


>sp|MNTP_METS3|MANGANESE exporter MntP|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 ESDDEY 8
+SDDEY
Sbjct: 92 DSDDEY 97


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 SESDDEYFD 10
E DDE+FD
Sbjct: 532 GEMDDEFFD 540




176|Sequence|876|885|DEYFDAEDGE

>sp|SECG_HALWD|PREPROTEIN translocase subunit SecG|Haloquadratum walsbyi (strain DSM 16790

Query: 3 YFDAED 8
YFDAED
Sbjct: 19 YFDAED 24


>sp|SECG_HALMA|PREPROTEIN translocase subunit SecG|Haloarcula marismortui (strain ATCC

Query: 3 YFDAED 8
YFDAED
Sbjct: 18 YFDAED 23


>sp|SECG_HALLT|PREPROTEIN translocase subunit SecG|Halorubrum lacusprofundi (strain ATCC

Query: 3 YFDAED 8
YFD+ED
Sbjct: 19 YFDSED 24


>sp|DGGGP_METKA|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 DEYFDAE 7
++YFDAE
Sbjct: 53 NDYFDAE 59


>sp|QUEC_SACS2|7-CYANO-7-DEAZAGUANINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DEYFDAE 7
DEYFDA+
Sbjct: 200 DEYFDAK 206


>sp|Y1345_METJA|TPR repeat-containing protein MJ1345|Methanocaldococcus jannaschii

Query: 1 DEYFDA 6
DEYFDA
Sbjct: 17 DEYFDA 22


>sp|Y1631_METJA|UNCHARACTERIZED protein MJ1631|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EYFDAE 7
EYFDAE
Sbjct: 502 EYFDAE 507


>sp|SECG_HALSA|PREPROTEIN translocase subunit SecG|Halobacterium salinarum (strain ATCC

Query: 3 YFDAED 8
YFD+ED
Sbjct: 19 YFDSED 24


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 2 EYFDAEDGE 10
EY DAE+ E
Sbjct: 614 EYLDAEEEE 622


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 2 EYFDAEDGE 10
EY DAE+ E
Sbjct: 614 EYLDAEEEE 622


>sp|IDI2_PYRAB|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus abyssi (strain GE5 /

Query: 2 EYFDAEDGE 10
EY+ +DGE
Sbjct: 234 EYYRTKDGE 242


>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 YFDAEDGE 10
YFD + GE
Sbjct: 95 YFDPDSGE 102


>sp|CAS1B_ARCFU|CRISPR-ASSOCIATED endonuclease Cas1 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YFDAEDGE 10
YF+ EDG+
Sbjct: 22 YFENEDGK 29


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 2 EYFDAEDGE 10
EY DAE+ E
Sbjct: 615 EYLDAEEEE 623


>sp|NUCS2_HALSA|ENDONUCLEASE NucS 2|Halobacterium salinarum (strain ATCC 700922

Query: 4 FDAEDG 9
FDAEDG
Sbjct: 116 FDAEDG 121


>sp|RPO2C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo2C|Archaeoglobus fulgidus (strain ATCC

Query: 2 EYFDAEDGE 10
EY DAE+ E
Sbjct: 98 EYLDAEEEE 106


>sp|PGP_METKA|PHOSPHOGLYCOLATE phosphatase|Methanopyrus kandleri (strain AV19 /

Query: 1 DEYFDAEDGE 10
D DAE+GE
Sbjct: 208 DVVLDAENGE 217


>sp|MAP2_METTH|METHIONINE aminopeptidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 DEYFDAE 7
+EYFDA+
Sbjct: 245 EEYFDAK 251


>sp|Y1056_PYRHO|PROBABLE S-adenosyl-L-methionine-binding protein PH1056|Pyrococcus

Query: 2 EYFDAEDG 9
++ DAEDG
Sbjct: 101 DWIDAEDG 108


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii (strain

Query: 2 EYFDAEDGE 10
EY DAE+ E
Sbjct: 103 EYLDAEEEE 111


>sp|ENO_THEKO|ENOLASE kodakarensis (strain ATCC BAA-918

Query: 1 DEYFDAEDGE 10
E+FD E G+
Sbjct: 249 SEFFDGEKGK 258


>sp|QUEC_SULAC|7-CYANO-7-DEAZAGUANINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DEYFDAED 8
D+YFDA +
Sbjct: 200 DDYFDATE 207




177|Sequence|881|890|AEDGEPQTCK

>sp|AROA_METBU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcoides burtonii (strain DSM

Query: 3 DGEPQT 8
DGEPQT
Sbjct: 74 DGEPQT 79


>sp|FTTA_PYRHO|TRANSCRIPTION termination factor FttA|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GEPQTC 9
GEPQ C
Sbjct: 619 GEPQKC 624


>sp|FTTA_PYRAB|TRANSCRIPTION termination factor FttA|Pyrococcus abyssi (strain GE5 /

Query: 4 GEPQTC 9
GEPQ C
Sbjct: 616 GEPQKC 621


>sp|GATD_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 2 EDGEPQ 7
EDGEP+
Sbjct: 305 EDGEPE 310


>sp|RS7_HALMA|SMALL ribosomal subunit protein uS7|Haloarcula marismortui (strain ATCC

Query: 1 AEDGEPQTCK 10
AE+ EP+T +
Sbjct: 14 AEESEPETAR 23


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 4 GEPQTCK 10
G+P TCK
Sbjct: 655 GKPVTCK 661


>sp|SYFB_AERPE|PHENYLALANINE--TRNA ligase beta subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 EDGEPQ 7
EDGEP+
Sbjct: 447 EDGEPR 452


>sp|SYR_METB6|ARGININE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 EDGEPQTCK 10
E G+P+T K
Sbjct: 216 ESGDPETVK 224




178|Sequence|886|895|PQTCKSMKGS

>sp|PYLB_METBF|3-METHYLORNITHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 QTCKSMKGS 10
+TCK++KG+
Sbjct: 98 ETCKTLKGA 106


>sp|PYLB_METAC|3-METHYLORNITHINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 QTCKSMKGS 10
+TCK++KG+
Sbjct: 98 ETCKALKGA 106




179|Sequence|891|900|SMKGSELKKA

>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SMKGSELKK 9
S+KGSEL K
Sbjct: 268 SIKGSELTK 276


>sp|Y1365_METJA|UNCHARACTERIZED protein MJ1365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GSELKKA 10
GSE+KKA
Sbjct: 103 GSEMKKA 109




180|Sequence|896|905|ELKKAAEVPN

>sp|PMDHL_METMA|PHOSPHOMEVALONATE dehydratase large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ELKKAAEV 8
ELKKAAE+
Sbjct: 294 ELKKAAEL 301




181|Sequence|901|910|AEVPNEELIN

>sp|ARLY_METBU|ARGININOSUCCINATE lyase|Methanococcoides burtonii (strain DSM 6242

Query: 1 AEVPNEELIN 10
A VP+EE+IN
Sbjct: 11 ASVPDEEIIN 20


>sp|KAD_METBF|ADENYLATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 2 EVPNEELI 9
EVP+EELI
Sbjct: 114 EVPDEELI 121


>sp|KATG_METAC|CATALASE-PEROXIDASE acetivorans (strain ATCC 35395

Query: 2 EVPNEELI 9
EVP EELI
Sbjct: 426 EVPAEELI 433


>sp|HIS8_METS3|HISTIDINOL-PHOSPHATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 AEVPNEELIN 10
AEV N++LIN
Sbjct: 200 AEVTNKDLIN 209


>sp|KATG_METHJ|CATALASE-PEROXIDASE hungatei JF-1 (strain ATCC

Query: 2 EVPNEELI 9
EVP+E+LI
Sbjct: 421 EVPDEDLI 428


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 AEVPNEELI 9
E+P EELI
Sbjct: 273 GEIPGEELI 281


>sp|MTBC3_METAC|DIMETHYLAMINE corrinoid protein 3|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 AEVPNEELI 9
AEVP EE+I
Sbjct: 32 AEVPPEEII 40


>sp|SYFB_METST|PHENYLALANINE--TRNA ligase beta subunit|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 EVPNEELIN 10
E+P +ELIN
Sbjct: 18 ELPKDELIN 26


>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 2 EVPNEEL 8
EVP EEL
Sbjct: 425 EVPQEEL 431


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 AEVPNEELI 9
E+PN+E+I
Sbjct: 736 VEIPNQEVI 744


>sp|ACDG_METTH|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanothermobacter

Query: 2 EVPNEELIN 10
++P+EEL+N
Sbjct: 101 DLPSEELLN 109


>sp|KAD_METTP|ADENYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 EVPNEELI 9
+VP+EEL+
Sbjct: 114 DVPDEELV 121


>sp|KATG2_HALMA|CATALASE-PEROXIDASE 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 EVPNEELI 9
EVP+EE+I
Sbjct: 421 EVPDEEMI 428


>sp|Y512_METJA|UNCHARACTERIZED protein MJ0512|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EVPNEELIN 10
E+P E+L N
Sbjct: 94 EIPKEQLYN 102


>sp|ARLY_SULTO|ARGININOSUCCINATE lyase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PNEELIN 10
PN ELIN
Sbjct: 400 PNPELIN 406




182|Sequence|906|915|EELINLLLKF

>sp|KORA_METTH|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter thermautotrophicus

Query: 1 EELINLLLK 9
EE++N++LK
Sbjct: 365 EEILNMILK 373


>sp|GFPS_AERPX|GERANYLFARNESYL diphosphate synthase|Aeropyrum pernix

Query: 1 EELINLLLKF 10
+EL+NLLL +
Sbjct: 303 KELLNLLLDY 312


>sp|PGK_ARCFU|PHOSPHOGLYCERATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EELINLLLKF 10
EE+IN+L K+
Sbjct: 258 EEMINILKKY 267


>sp|SYC_THEGJ|CYSTEINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 EELINLLLK 9
EELINLL++
Sbjct: 426 EELINLLVE 434


>sp|AATB_METPE|A-TYPE ATP synthase subunit B|Methanosphaerula palustris (strain ATCC

Query: 1 EELINLLL 8
EEL+N++L
Sbjct: 26 EELVNIVL 33


>sp|TRM56_THEPD|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermofilum pendens (strain

Query: 1 EELINLL 7
EELINL+
Sbjct: 97 EELINLI 103




183|Sequence|911|920|LLLKFEIKEV

>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LLLKFEIKE 9
+L+KFE+KE
Sbjct: 210 ILIKFELKE 218


>sp|ATGT_PYRHO|TRNA-GUANINE(15) transglycosylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LLKFEIK 8
+LKFEIK
Sbjct: 7 MLKFEIK 13




184|Sequence|916|925|EIKEVILEFT

>sp|ARLY_METM7|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C7 /

Query: 1 EIKEVILE 8
EIKE+ILE
Sbjct: 402 EIKEIILE 409


>sp|ARLY_METM6|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C6 /

Query: 1 EIKEVILE 8
EIKE+ILE
Sbjct: 402 EIKEIILE 409


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EIKEVILEF 9
E+KE ILEF
Sbjct: 393 ELKENILEF 401


>sp|ACDB_METTH|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanothermobacter

Query: 1 EIKEVILEF 9
E+KE +LEF
Sbjct: 355 ELKESVLEF 363


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 1 EIKEVILEFT 10
E+KEV+ ++T
Sbjct: 246 ELKEVVSKYT 255




185|Sequence|921|930|ILEFTKQQKE

>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILEFTKQQKE 10
IL +TK +KE
Sbjct: 140 ILNYTKPEKE 149


>sp|SYFA_METS5|PHENYLALANINE--TRNA ligase alpha subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 ILEFTKQQKE 10
IL+F K++KE
Sbjct: 9 ILDFLKRRKE 18




186|Sequence|926|935|KQQKEEDTIL

>sp|AROC_THEVO|CHORISMATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 QQKEEDTI 9
Q+KEED +
Sbjct: 58 QRKEEDVV 65




187|Sequence|931|940|EDTILVFNVT

>sp|NAC_METM6|NASCENT polypeptide-associated complex protein|Methanococcus maripaludis

Query: 1 EDTILVF 7
EDTILVF
Sbjct: 40 EDTILVF 46


>sp|NAC_METM5|NASCENT polypeptide-associated complex protein|Methanococcus maripaludis

Query: 1 EDTILVF 7
EDTILVF
Sbjct: 40 EDTILVF 46


>sp|NQOR_METAC|NAD(P)H dehydrogenase (quinone)|Methanosarcina acetivorans (strain ATCC

Query: 1 EDTILVFNVT 10
E TIL F+VT
Sbjct: 131 ESTILTFHVT 140


>sp|NQOR_METMA|NAD(P)H dehydrogenase (quinone)|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EDTILVFNVT 10
E TIL F+VT
Sbjct: 131 ESTILSFHVT 140


>sp|TRPB_PYRHO|TRYPTOPHAN synthase beta chain|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EDTILVFNVT 10
E+T+++FN++
Sbjct: 412 EETVILFNLS 421


>sp|Y85A_METJA|PUTATIVE transposase MJ0856.1|Methanocaldococcus jannaschii (strain ATCC

Query: 2 DTILVFNV 9
DT+ VFN+
Sbjct: 72 DTVAVFNL 79




188|Sequence|936|945|VFNVTQLGTE

***** No hits found ******


189|Sequence|941|950|QLGTEATMRT

>sp|GSA_PICTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Picrophilus torridus (strain ATCC 700027

Query: 3 GTEATM 8
GTEATM
Sbjct: 111 GTEATM 116


>sp|GSA_METVS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus vannielii (strain ATCC 35089

Query: 3 GTEATM 8
GTEATM
Sbjct: 118 GTEATM 123


>sp|GSA_METST|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 GTEATM 8
GTEATM
Sbjct: 114 GTEATM 119


>sp|GSA_METM7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C7 /

Query: 3 GTEATM 8
GTEATM
Sbjct: 118 GTEATM 123


>sp|GSA_METJA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GTEATM 8
GTEATM
Sbjct: 116 GTEATM 121


>sp|GSA_META3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GTEATM 8
GTEATM
Sbjct: 121 GTEATM 126


>sp|GSA_THEAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 GTEATM 8
GTEATM
Sbjct: 111 GTEATM 116


>sp|GSA_SACI7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 GTEATM 8
GTEATM
Sbjct: 120 GTEATM 125


>sp|GSA_SACI6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 GTEATM 8
GTEATM
Sbjct: 120 GTEATM 125


>sp|GSA_SACI4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 GTEATM 8
GTEATM
Sbjct: 120 GTEATM 125


>sp|GSA_SACI3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.27)

Query: 3 GTEATM 8
GTEATM
Sbjct: 120 GTEATM 125


>sp|GSA_SACI2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 GTEATM 8
GTEATM
Sbjct: 120 GTEATM 125


>sp|GSA_SACI1|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 GTEATM 8
GTEATM
Sbjct: 120 GTEATM 125


>sp|GSA_METMP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GTEATM 8
GTEATM
Sbjct: 118 GTEATM 123


>sp|GSA_SULAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GTEATM 8
GTEATM
Sbjct: 111 GTEATM 116


>sp|GSA_METM6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C6 /

Query: 3 GTEATM 8
GTEATM
Sbjct: 118 GTEATM 123


>sp|GSA_PYRCJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 GTEATM 8
GTEATM
Sbjct: 123 GTEATM 128


>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 1 QLGTEATMRT 10
+LGTE +RT
Sbjct: 418 KLGTENALRT 427


>sp|GSA_THEVO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GTEATM 8
GTEATM
Sbjct: 111 GTEATM 116


>sp|HELS_METAC|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QLGTEATMRT 10
+LGTE +RT
Sbjct: 418 KLGTENALRT 427


>sp|GSA_SULTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GTEATM 8
GTEATM
Sbjct: 111 GTEATM 116


>sp|GSA_IGNH4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 GTEATM 8
GTEATM
Sbjct: 113 GTEATM 118


>sp|GSA_SACS2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GTEATM 8
GTEATM
Sbjct: 112 GTEATM 117


>sp|GSA_METM5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C5 /

Query: 3 GTEATM 8
GTEATM
Sbjct: 118 GTEATM 123


>sp|GSA_METKA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanopyrus kandleri (strain AV19 /

Query: 3 GTEATM 8
GTEATM
Sbjct: 118 GTEATM 123


>sp|HELS_METMA|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QLGTEATMRT 10
+LGTE +RT
Sbjct: 418 KLGTENALRT 427


>sp|GSA_METBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcoides burtonii (strain DSM 6242

Query: 3 GTEATM 8
GTEATM
Sbjct: 115 GTEATM 120


>sp|HELS_METBF|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina barkeri (strain Fusaro /

Query: 1 QLGTEATMRT 10
+LGTE +RT
Sbjct: 418 KLGTENALRT 427


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter

Query: 2 LGTEATMR 9
LG EAT+R
Sbjct: 18 LGNEATVR 25


>sp|RPO1C_META3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus aeolicus (strain ATCC

Query: 3 GTEATMRT 10
GT+ TMRT
Sbjct: 72 GTQMTMRT 79


>sp|GSA_METMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GTEATM 8
GTEATM
Sbjct: 118 GTEATM 123


>sp|RPO1C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanothermobacter thermautotrophicus

Query: 3 GTEATMRT 10
GT+ TMRT
Sbjct: 144 GTQMTMRT 151


>sp|GSA_METS5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Metallosphaera sedula (strain ATCC 51363

Query: 3 GTEATM 8
GTEATM
Sbjct: 111 GTEATM 116


>sp|RPO1C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanothermobacter thermautotrophicus

Query: 3 GTEATMRT 10
GT+ TMRT
Sbjct: 144 GTQMTMRT 151


>sp|GSA_METAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GTEATM 8
GTEATM
Sbjct: 118 GTEATM 123


>sp|GSA_METTP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 GTEATM 8
GTEATM
Sbjct: 124 GTEATM 129


>sp|GSA_METAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocella arvoryzae (strain DSM 22066

Query: 3 GTEATM 8
GTEATM
Sbjct: 114 GTEATM 119


>sp|GSA_HYPBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Hyperthermus butylicus (strain DSM 5456

Query: 3 GTEATM 8
GTEATM
Sbjct: 115 GTEATM 120


>sp|RPO1C_METM7|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C7

Query: 3 GTEATMRT 10
GT+ TMRT
Sbjct: 72 GTQMTMRT 79


>sp|RPO1C_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma volcanium (strain ATCC

Query: 3 GTEATMRT 10
GT+ TMRT
Sbjct: 195 GTQMTMRT 202


>sp|RPO1C_METAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina acetivorans (strain

Query: 3 GTEATMRT 10
GT+ TMRT
Sbjct: 71 GTQMTMRT 78


>sp|RPO1C_METMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina mazei (strain ATCC

Query: 3 GTEATMRT 10
GT+ TMRT
Sbjct: 74 GTQMTMRT 81


>sp|RPO1C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Archaeoglobus fulgidus (strain ATCC

Query: 3 GTEATMRT 10
GT+ TMRT
Sbjct: 71 GTQMTMRT 78


>sp|GSA_PYRNV|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 GTEATM 8
GTEATM
Sbjct: 108 GTEATM 113


>sp|GSA_PYRIL|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 GTEATM 8
GTEATM
Sbjct: 108 GTEATM 113


>sp|RPO1C_METM6|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C6

Query: 3 GTEATMRT 10
GT+ TMRT
Sbjct: 72 GTQMTMRT 79


>sp|RPO1C_METM5|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C5

Query: 3 GTEATMRT 10
GT+ TMRT
Sbjct: 72 GTQMTMRT 79


>sp|RPO1C_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma acidophilum (strain ATCC

Query: 3 GTEATMRT 10
GT+ TMRT
Sbjct: 195 GTQMTMRT 202


>sp|RPO1C_METMP|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain

Query: 3 GTEATMRT 10
GT+ TMRT
Sbjct: 72 GTQMTMRT 79


>sp|RPO1C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus vannielii (strain ATCC

Query: 3 GTEATMRT 10
GT+ TMRT
Sbjct: 72 GTQMTMRT 79




190|Sequence|946|955|ATMRTFDLTV

***** No hits found ******


191|Sequence|951|960|FDLTVVSYLK

>sp|HELS_PYRCJ|ATP-DEPENDENT DNA helicase Hel308|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 FDLTVVSYLK 10
FD+ VV+Y K
Sbjct: 113 FDVVVVTYEK 122


>sp|Y110_METJA|UNCHARACTERIZED protein MJ0110|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FDLTVVSYL 9
FD+TV+ Y+
Sbjct: 7 FDITVIGYI 15


>sp|KORA_METTM|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter marburgensis (strain ATCC

Query: 2 DLTVVSY 8
D+TV+SY
Sbjct: 274 DITVISY 280




192|Sequence|956|965|VSYLKKISLD

>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 1 VSYLKKISL 9
V Y+KKIS+
Sbjct: 133 VEYIKKISI 141


>sp|AROE_NITMS|SHIKIMATE dehydrogenase (NADP(+))|Nitrosopumilus maritimus (strain SCM1)

Query: 1 VSYLKKISLD 10
V + KKISLD
Sbjct: 160 VEFAKKISLD 169


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 VSYLKKI 7
VSYL+KI
Sbjct: 974 VSYLRKI 980


>sp|LADH_METVS|LACTALDEHYDE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 2 SYLKKISLD 10
SY+KK++L+
Sbjct: 232 SYMKKVALE 240


>sp|RIFK_METMA|RIBOFLAVIN kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VSYLKKISL 9
+ YLKK++L
Sbjct: 4 IEYLKKLAL 12


>sp|RIFK_METAC|RIBOFLAVIN kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VSYLKKISL 9
+ YLKK++L
Sbjct: 16 IEYLKKLAL 24


>sp|HEM11_PYRAR|GLUTAMYL-TRNA reductase 1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VSYLKKISL 9
V+YLKK+++
Sbjct: 357 VNYLKKVAV 365




193|Sequence|961|970|KISLDYHEIE

>sp|EF2_KORCO|ELONGATION factor 2|Korarchaeum cryptofilum (strain OPF8)

Query: 3 SLDYHEIE 10
+LDYHEIE
Sbjct: 58 ALDYHEIE 65


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KISLDYHEIE 10
K+S+D++EIE
Sbjct: 123 KLSVDFYEIE 132


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 SLDYHEI 9
SLD+HE+
Sbjct: 694 SLDFHEV 700


>sp|PCP_THELN|PYRROLIDONE-CARBOXYLATE peptidase|Thermococcus litoralis (strain ATCC 51850

Query: 1 KISLDYHE 8
K+SLDY E
Sbjct: 203 KVSLDYLE 210




194|Sequence|966|975|YHEIEGSKRK

>sp|HFLX_HYPBU|GTPASE HflX|Hyperthermus butylicus (strain DSM 5456

Query: 2 HEIEGSKRK 10
HEIE SKR+
Sbjct: 181 HEIERSKRR 189


>sp|EF2_SULTO|ELONGATION factor 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YHEIEG 6
YHEIEG
Sbjct: 79 YHEIEG 84


>sp|Y1363_ARCFU|UNCHARACTERIZED protein AF_1363|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YHEIEGS 7
+HEIEGS
Sbjct: 16 FHEIEGS 22


>sp|EF2_METS5|ELONGATION factor 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 YHEIEG 6
YHE+EG
Sbjct: 79 YHEVEG 84


>sp|Y663_METJA|UNCHARACTERIZED protein MJ0663|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YHEIEGSKRK 10
Y+EIEGS K
Sbjct: 34 YNEIEGSSIK 43


>sp|EF2_SULAC|ELONGATION factor 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 YHEIEG 6
YHEI+G
Sbjct: 79 YHEIDG 84


>sp|RADA_HALSA|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 2 HEIEGS 7
HEIEGS
Sbjct: 170 HEIEGS 175


>sp|RADA_HALS3|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 2 HEIEGS 7
HEIEGS
Sbjct: 170 HEIEGS 175


>sp|PRIS_METB6|DNA primase small subunit PriS|Methanoregula boonei (strain DSM 21154

Query: 2 HEIEGSKRK 10
HE EG RK
Sbjct: 263 HETEGEFRK 271


>sp|EF2_SACS2|ELONGATION factor 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YHEIEG 6
YHE EG
Sbjct: 79 YHEAEG 84


>sp|EF2_SACI7|ELONGATION factor 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 YHEIEG 6
YHE EG
Sbjct: 79 YHEAEG 84


>sp|EF2_SACI6|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.4 /

Query: 1 YHEIEG 6
YHE EG
Sbjct: 79 YHEAEG 84


>sp|EF2_SACI4|ELONGATION factor 2|Saccharolobus islandicus (strain M.14.25 /

Query: 1 YHEIEG 6
YHE EG
Sbjct: 79 YHEAEG 84


>sp|EF2_SACI3|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 YHEIEG 6
YHE EG
Sbjct: 79 YHEAEG 84


>sp|EF2_SACI2|ELONGATION factor 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 YHEIEG 6
YHE EG
Sbjct: 79 YHEAEG 84


>sp|EF2_SACI1|ELONGATION factor 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 YHEIEG 6
YHE EG
Sbjct: 79 YHEAEG 84


>sp|MFNA_METST|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosphaera stadtmanae

Query: 1 YHEIEGSKR 9
YH +EG K+
Sbjct: 288 YHGMEGYKK 296




195|Sequence|971|980|GSKRKPLHLI

>sp|RNZ_AERPE|RIBONUCLEASE Z|Aeropyrum pernix (strain ATCC 700893

Query: 2 SKRKPLHLI 10
S+RKPL +I
Sbjct: 84 SRRKPLTII 92


>sp|MTMB_METMA|MONOMETHYLAMINE methyltransferase MtmB|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GSKRKPL 7
G KRKP+
Sbjct: 119 GDKRKPI 125


>sp|MTMB2_METAC|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina acetivorans (strain ATCC

Query: 1 GSKRKPL 7
G KRKP+
Sbjct: 119 GDKRKPI 125


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 1 GSKRKPL 7
G KRKP+
Sbjct: 119 GDKRKPI 125


>sp|G3P_THEVO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GSKRKPLHL 9
G K KPL++
Sbjct: 90 GEKNKPLYI 98


>sp|G3P_PYRHO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GSKRKPLH 8
G+K KPL+
Sbjct: 92 GAKNKPLY 99


>sp|G3P_PYRAB|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 GSKRKPLH 8
G+K KPL+
Sbjct: 92 GAKNKPLY 99


>sp|RL44E_DESA1|LARGE ribosomal subunit protein eL42|Desulfurococcus amylolyticus

Query: 1 GSKRKP 6
GSKRKP
Sbjct: 55 GSKRKP 60


>sp|Y1153_PYRAB|UPF0098 protein PYRAB11530|Pyrococcus abyssi (strain GE5 /

Query: 1 GSKRKPLHLI 10
G KP+H+I
Sbjct: 101 GEVEKPIHMI 110




196|Sequence|976|985|PLHLISSSDK

>sp|GGPS_SACS2|GERANYLGERANYL diphosphate synthase|Saccharolobus solfataricus (strain ATCC

Query: 1 PLHLISSSD 9
PL L+SSSD
Sbjct: 49 PLVLVSSSD 57


>sp|ABLA_METMA|L-LYSINE 2,3-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PLHLISSSD 9
P +LISSSD
Sbjct: 343 PNYLISSSD 351


>sp|AGLE_HALVD|GLYCOSYLTRANSFERASE AglE|Haloferax volcanii (strain ATCC 29605

Query: 1 PLHLISSSD 9
P HLIS D
Sbjct: 176 PNHLISGGD 184


>sp|HELS_METAC|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LHLISSSDK 10
+HLI S+D+
Sbjct: 146 VHLIDSADR 154




197|Sequence|981|990|SSSDKPGLDL

>sp|FRHB_METBF|COENZYME F420 hydrogenase subunit beta|Methanosarcina barkeri (strain Fusaro

Query: 5 KPGLDL 10
KPGLDL
Sbjct: 253 KPGLDL 258


>sp|FRHB_METVO|COENZYME F420 hydrogenase subunit beta|Methanococcus voltae

Query: 5 KPGLDL 10
KPGLDL
Sbjct: 247 KPGLDL 252


>sp|HEM1_THEAC|GLUTAMYL-TRNA reductase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 DKPGLDL 10
DKPG D+
Sbjct: 252 DKPGADI 258


>sp|G1PDH_PYRCJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum calidifontis (strain DSM

Query: 4 DKPGLDL 10
+KPG DL
Sbjct: 68 EKPGFDL 74


>sp|HIS1_IGNH4|ATP phosphoribosyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 SDKPGLDL 10
S+KP LDL
Sbjct: 38 SNKPNLDL 45


>sp|RS4E_ARCFU|SMALL ribosomal subunit protein eS4|Archaeoglobus fulgidus (strain ATCC

Query: 3 SDKPGLDL 10
SDKP +DL
Sbjct: 226 SDKPVIDL 233


>sp|AATA_HALVD|A-TYPE ATP synthase subunit A|Haloferax volcanii (strain ATCC 29605

Query: 4 DKPGLDL 10
D PG+DL
Sbjct: 116 DAPGIDL 122




198|Sequence|986|995|PGLDLLKVEY

>sp|FRHB_METBF|COENZYME F420 hydrogenase subunit beta|Methanosarcina barkeri (strain Fusaro

Query: 1 PGLDLLK 7
PGLDLL+
Sbjct: 254 PGLDLLR 260


>sp|RL4_METTH|LARGE ribosomal subunit protein uL4|Methanothermobacter

Query: 1 PGLDLLKVE 9
PG+D+++VE
Sbjct: 214 PGVDVVRVE 222


>sp|TRUA_METBF|TRNA pseudouridine synthase A|Methanosarcina barkeri (strain Fusaro /

Query: 2 GLDLLKVEY 10
GL LLKV Y
Sbjct: 220 GLTLLKVNY 228


>sp|Y3226_SACS2|UNCHARACTERIZED aldolase SSO3226|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GLDLLKVEY 10
G D+LKV+Y
Sbjct: 180 GADILKVDY 188


>sp|QUEC_METVS|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GLDLLKVEY 10
GLD+LK Y
Sbjct: 185 GLDILKYSY 193


>sp|Y456_ARCFU|UNCHARACTERIZED protein AF_0456|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PGLDLLKVE 9
P LDL+ VE
Sbjct: 118 PNLDLVSVE 126


>sp|SYK_CENSY|LYSINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 GLDLLKVEY 10
GLD L +EY
Sbjct: 124 GLDALNIEY 132


>sp|COFH1_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina barkeri (strain Fusaro

Query: 1 PGLDLLKV 8
PGLD LK+
Sbjct: 266 PGLDDLKI 273


>sp|CIMA_SULAC|(R)-CITRAMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 DLLKVEY 10
DL+KVEY
Sbjct: 396 DLIKVEY 402


>sp|MCRB_METTH|METHYL-COENZYME M reductase I subunit|Methanothermobacter thermautotrophicus

Query: 1 PGLDLLKVE 9
PG+D KVE
Sbjct: 345 PGVDFGKVE 353


>sp|ADHS1_ARCFU|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GLDLLKVEY 10
G D+LKV Y
Sbjct: 167 GADILKVPY 175


>sp|AATD_THEVO|A-TYPE ATP synthase subunit D|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GLDLLKVE 9
GLDLLK++
Sbjct: 23 GLDLLKMK 30


>sp|AMPPA_METMJ|AMP phosphorylase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GLDLLKVEY 10
GLD+ +VEY
Sbjct: 134 GLDMDEVEY 142


>sp|SYK_CENSM|LYSINE--TRNA ligase|Cenarchaeum symbiosum

Query: 2 GLDLLKVEY 10
GLD L +EY
Sbjct: 123 GLDALGIEY 131


>sp|RBL_PYRHO|RIBULOSE bisphosphate carboxylase|Pyrococcus horikoshii (strain ATCC

Query: 1 PGLDLLKVEY 10
PG D L VEY
Sbjct: 21 PGRDELIVEY 30


>sp|AATD_THEAC|A-TYPE ATP synthase subunit D|Thermoplasma acidophilum (strain ATCC

Query: 2 GLDLLKVE 9
GLDLLK++
Sbjct: 29 GLDLLKMK 36


>sp|MTRA_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 1 PGLDLLKVEY 10
PG +LK EY
Sbjct: 9 PGWPILKGEY 18


>sp|MTRA_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina barkeri (strain

Query: 1 PGLDLLKVEY 10
PG +LK EY
Sbjct: 9 PGWPILKGEY 18


>sp|RBL_PYRAB|RIBULOSE bisphosphate carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 PGLDLLKVEY 10
PG D L VEY
Sbjct: 20 PGRDELIVEY 29


>sp|RBL_PYRFU|RIBULOSE bisphosphate carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PGLDLLKVEY 10
PG D L VEY
Sbjct: 16 PGRDELIVEY 25


>sp|SYE_CENSY|GLUTAMATE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 GLDLLKVEY 10
GLD L +EY
Sbjct: 152 GLDWLGIEY 160


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PGLDLLKVEY 10
PG + KV+Y
Sbjct: 918 PGFKIYKVDY 927


>sp|GPMPP_METBU|GLUCOSYL-3-PHOSPHOGLYCERATE/MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PGLDLLK 7
P LDLLK
Sbjct: 26 PALDLLK 32




199|Sequence|991|1000|LKVEYIKADK

>sp|FAU1_SACS2|PROBABLE ribonuclease FAU-1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LKVEYIKAD 9
LK+E+IKAD
Sbjct: 271 LKIEHIKAD 279


>sp|FAU1_SACI2|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LKVEYIKAD 9
+K+E+IKAD
Sbjct: 271 MKIEHIKAD 279


>sp|FAU1_SACI6|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LKVEYIKAD 9
+K+E+IKAD
Sbjct: 271 MKIEHIKAD 279


>sp|FAU1_SACI4|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LKVEYIKAD 9
+K+E+IKAD
Sbjct: 271 MKIEHIKAD 279


>sp|FAU1_SACI3|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.27)

Query: 1 LKVEYIKAD 9
+K+E+IKAD
Sbjct: 271 MKIEHIKAD 279


>sp|FAU1_SACI7|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LKVEYIKAD 9
+K+E+IKAD
Sbjct: 271 MKIEHIKAD 279


>sp|CDC6B_HALMA|ORC1-TYPE DNA replication protein 2|Haloarcula marismortui (strain ATCC

Query: 1 LKVEYIKAD 9
LKVEY+ D
Sbjct: 18 LKVEYVPDD 26


>sp|MCRA_METBF|METHYL-COENZYME M reductase subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 2 KVEYIKADK 10
KVE IKA K
Sbjct: 49 KVEMIKAGK 57


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 1 LKVEYIKADK 10
+ ++Y KADK
Sbjct: 273 IAIKYAKADK 282


>sp|PYRH_METS3|URIDYLATE kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 EYIKADK 10
EYI ADK
Sbjct: 128 EYIHADK 134




200|Sequence|996|1005|IKADKNGPSF

>sp|EF2_NANEQ|ELONGATION factor 2|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 IKADKNGPS 9
++AD NGP+
Sbjct: 289 LEADPNGPA 297


>sp|EF2_PYRNV|ELONGATION factor 2|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 IKADKNGPS 9
++AD NGP+
Sbjct: 288 LEADPNGPT 296


>sp|PSB_METBU|PROTEASOME subunit beta|Methanococcoides burtonii (strain DSM 6242

Query: 4 DKNGPS 9
DKNGP+
Sbjct: 114 DKNGPA 119


>sp|EF2_PYRIL|ELONGATION factor 2|Pyrobaculum islandicum (strain DSM 4184

Query: 1 IKADKNGPS 9
++AD NGP+
Sbjct: 288 LEADPNGPT 296


>sp|EF2_PYRAR|ELONGATION factor 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 IKADKNGPS 9
++AD NGP+
Sbjct: 288 LEADPNGPT 296


>sp|EF2_PYRCJ|ELONGATION factor 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 IKADKNGPS 9
++AD NGP+
Sbjct: 288 LEADPNGPT 296


>sp|EF2_SULAC|ELONGATION factor 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IKADKNGP 8
I AD NGP
Sbjct: 286 INADPNGP 293


>sp|EF2_PYRAE|ELONGATION factor 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IKADKNGPS 9
++AD NGP+
Sbjct: 288 LEADPNGPT 296


>sp|EF2_SULTO|ELONGATION factor 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IKADKNGP 8
I AD NGP
Sbjct: 286 INADPNGP 293


>sp|GINS_METJA|PROBABLE DNA replication complex GINS|Methanocaldococcus jannaschii (strain

Query: 1 IKADKNGPSF 10
+K DKN P F
Sbjct: 141 VKVDKNFPPF 150


>sp|PSB_METMA|PROTEASOME subunit beta|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 DKNGPS 9
DKNGP+
Sbjct: 114 DKNGPA 119


>sp|PSB_METAC|PROTEASOME subunit beta|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 DKNGPS 9
DKNGP+
Sbjct: 114 DKNGPA 119


>sp|PSB_METMS|PROTEASOME subunit beta|Methanohalophilus mahii (strain ATCC 35705

Query: 4 DKNGPS 9
DKNGP+
Sbjct: 114 DKNGPA 119


>sp|EF2_DESMO|ELONGATION factor 2|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 1 IKADKNGP 8
++AD NGP
Sbjct: 283 MEADPNGP 290


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 IKADKNGP 8
++AD NGP
Sbjct: 285 MEADPNGP 292


>sp|Y317_METJA|UNCHARACTERIZED protein MJ0317|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IKADKNGP 8
+KAD NGP
Sbjct: 29 LKADFNGP 36


>sp|FAEHP_METHJ|BIFUNCTIONAL enzyme Fae/Hps|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 IKADKNGP 8
I DKNGP
Sbjct: 21 IVGDKNGP 28


>sp|FAEHP_METTP|BIFUNCTIONAL enzyme Fae/Hps|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 ADKNGP 8
DKNGP
Sbjct: 23 GDKNGP 28


>sp|PSB_METTE|PROTEASOME subunit beta|Methanosarcina thermophila

Query: 4 DKNGP 8
DKNGP
Sbjct: 114 DKNGP 118


>sp|ACDB1_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 2 KADKNGPSF 10
K D NGP F
Sbjct: 515 KIDPNGPIF 523


>sp|CPKA_PYRFU|CARBAMATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 DKNGPSF 10
DKN P+F
Sbjct: 120 DKNDPAF 126


>sp|ACDB2_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 2 KADKNGPSF 10
K D NGP F
Sbjct: 222 KIDPNGPIF 230


>sp|PSB_METBF|PROTEASOME subunit beta|Methanosarcina barkeri (strain Fusaro /

Query: 4 DKNGP 8
DKNGP
Sbjct: 114 DKNGP 118


>sp|EF2_SACI7|ELONGATION factor 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 IKADKNGP 8
+ AD NGP
Sbjct: 286 LNADPNGP 293


>sp|EF2_SACI6|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IKADKNGP 8
+ AD NGP
Sbjct: 286 LNADPNGP 293


>sp|EF2_SACI4|ELONGATION factor 2|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IKADKNGP 8
+ AD NGP
Sbjct: 286 LNADPNGP 293


>sp|EF2_SACI3|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 IKADKNGP 8
+ AD NGP
Sbjct: 286 LNADPNGP 293


>sp|EF2_SACI2|ELONGATION factor 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 IKADKNGP 8
+ AD NGP
Sbjct: 286 LNADPNGP 293


>sp|EF2_SACI1|ELONGATION factor 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 IKADKNGP 8
+ AD NGP
Sbjct: 286 LNADPNGP 293


>sp|EF2_SACS2|ELONGATION factor 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IKADKNGP 8
+ AD NGP
Sbjct: 286 LNADPNGP 293


>sp|AATF_METM5|A-TYPE ATP synthase subunit F|Methanococcus maripaludis (strain C5 /

Query: 4 DKNGP 8
DKNGP
Sbjct: 74 DKNGP 78


>sp|EF2_METS5|ELONGATION factor 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 IKADKNGP 8
+ AD NGP
Sbjct: 286 LNADPNGP 293


>sp|FAEHP_METAR|BIFUNCTIONAL enzyme Fae/Hps|Methanocella arvoryzae (strain DSM 22066

Query: 3 ADKNGP 8
DKNGP
Sbjct: 23 GDKNGP 28


>sp|CPKA_THEKO|CARBAMATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 DKNGPSF 10
DKN P+F
Sbjct: 120 DKNDPAF 126


>sp|AATF_METM7|A-TYPE ATP synthase subunit F|Methanococcus maripaludis (strain C7 /

Query: 4 DKNGP 8
DKNGP
Sbjct: 74 DKNGP 78


>sp|SYDND_SULTO|ASPARTATE--TRNA(ASP/ASN) ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IKADKNGP 8
+KADK P
Sbjct: 75 VKADKRAP 82


>sp|AATF_METM6|A-TYPE ATP synthase subunit F|Methanococcus maripaludis (strain C6 /

Query: 4 DKNGP 8
DKNGP
Sbjct: 74 DKNGP 78




201|Sequence|1001|1010|NGPSFQTAFG

>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GPSFQTAFG 10
GPSF+ A G
Sbjct: 184 GPSFEVAVG 192


>sp|APGM_AERPE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PSFQTAFG 10
PSFQ FG
Sbjct: 251 PSFQERFG 258


>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GPSFQTAFG 10
GPSF+ G
Sbjct: 201 GPSFEVTVG 209


>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 GPSFQTAFG 10
GPSF+ G
Sbjct: 200 GPSFEVTVG 208


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 GPSFQTAFG 10
GPSF+ G
Sbjct: 199 GPSFEVTVG 207




202|Sequence|1006|1015|QTAFGKTEQT

>sp|DNAJ_HALMT|CHAPERONE protein DnaJ|Haloferax mediterranei (strain ATCC 33500

Query: 1 QTAFGKTEQT 10
QT FG+ +QT
Sbjct: 191 QTPFGRVQQT 200


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 AFGKTE 8
AFGKTE
Sbjct: 444 AFGKTE 449


>sp|DNAJ_NATPD|CHAPERONE protein DnaJ|Natronomonas pharaonis (strain ATCC 35678

Query: 1 QTAFGKTEQT 10
QTA G+ +QT
Sbjct: 185 QTALGRVQQT 194


>sp|RS24_ARCFU|SMALL ribosomal subunit protein eS24|Archaeoglobus fulgidus (strain

Query: 1 QTAFGKTE 8
+T FGKTE
Sbjct: 59 KTEFGKTE 66


>sp|CS3HE_THETK|CRISPR-ASSOCIATED helicase Cas3|Thermoproteus tenax (strain ATCC 35583

Query: 2 TAFGKTE 8
T FGKTE
Sbjct: 56 TGFGKTE 62


>sp|AATI_METJA|A-TYPE ATP synthase subunit I|Methanocaldococcus jannaschii (strain ATCC

Query: 2 TAFGKTEQT 10
+ FGKT++T
Sbjct: 297 SQFGKTDRT 305




203|Sequence|1011|1020|KTEQTVKVAF

***** No hits found ******


204|Sequence|1016|1025|VKVAFSSLNL

>sp|MCRA_METFE|METHYL-COENZYME M reductase subunit alpha|Methanothermus fervidus

Query: 1 VKVAFSSLNL 10
VKVAF+ NL
Sbjct: 513 VKVAFADDNL 522


>sp|MCRA_METKA|METHYL-COENZYME M reductase I subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 VKVAFSSLNL 10
+KVAF+ NL
Sbjct: 512 IKVAFADENL 521




205|Sequence|1021|1030|SSLNLLLQTQ

>sp|SYFA_PYRCJ|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 SLNLLLQTQ 10
+LNL+L+TQ
Sbjct: 305 ALNLVLRTQ 313




206|Sequence|1026|1035|LLQTQALVAS

>sp|TAL_THEAC|PROBABLE transaldolase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LLQTQALVAS 10
+++TQ LVAS
Sbjct: 158 IIKTQILVAS 167


>sp|TAL_THEVO|PROBABLE transaldolase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LLQTQALVAS 10
+++TQ LVAS
Sbjct: 158 IIKTQILVAS 167




207|Sequence|1031|1040|ALVASINYLT

***** No hits found ******


208|Sequence|1036|1045|INYLTTIIPS

>sp|SYM_PYRHO|METHIONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 YLTTIIP 9
YLTTI+P
Sbjct: 370 YLTTIMP 376


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 YLTTIIP 9
YLTTI+P
Sbjct: 370 YLTTIMP 376


>sp|Y787_METJA|UNCHARACTERIZED protein MJ0787|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YLTTIIPS 10
Y+TT IP+
Sbjct: 479 YITTFIPN 486




209|Sequence|1041|1050|TIIPSDDQSI

>sp|RL18_PYRIL|LARGE ribosomal subunit protein uL18|Pyrobaculum islandicum (strain DSM

Query: 2 IIPSDDQ 8
IIPSDD+
Sbjct: 136 IIPSDDR 142


>sp|DLDH2_HALMA|DIHYDROLIPOYL dehydrogenase 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 IIPSDDQ 8
+IP+DDQ
Sbjct: 299 VIPTDDQ 305


>sp|HIS7_SULAC|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TIIPSDD 7
TIIP DD
Sbjct: 95 TIIPMDD 101


>sp|RL18_NANEQ|LARGE ribosomal subunit protein uL18|Nanoarchaeum equitans (strain

Query: 1 TIIPSDDQ 8
TI+PS+D+
Sbjct: 135 TILPSEDR 142


>sp|LADH_METJA|LACTALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IIPSDDQSI 10
+IPSDD+ I
Sbjct: 115 VIPSDDRLI 123


>sp|RL18_STAMF|LARGE ribosomal subunit protein uL18|Staphylothermus marinus (strain ATCC

Query: 2 IIPSDDQ 8
++PSDD+
Sbjct: 137 VVPSDDR 143


>sp|LEUC_HALVD|3-ISOPROPYLMALATE dehydratase large subunit|Haloferax volcanii (strain ATCC 29605

Query: 2 IIPSDDQS 9
I+P+ DQS
Sbjct: 65 IVPTSDQS 72


>sp|KITH_HALWD|THYMIDINE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 IIPSDDQSI 10
+IPS+D S+
Sbjct: 107 VIPSNDDSV 115




210|Sequence|1046|1055|DDQSISVAKE

***** No hits found ******


211|Sequence|1051|1060|SVAKEVQIST

>sp|LYSM_SULTO|HTH-TYPE transcriptional regulator LysM|Sulfurisphaera tokodaii (strain

Query: 1 SVAKEVQIS 9
S+AKE++IS
Sbjct: 25 SIAKELKIS 33




212|Sequence|1056|1065|VQISTEKQQK

***** No hits found ******


213|Sequence|1061|1070|EKQQKNSTLP

>sp|PUR8_METTH|ADENYLOSUCCINATE lyase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 EKQQKNSTLP 10
EKQ +ST+P
Sbjct: 270 EKQVGSSTMP 279


>sp|THIL_METHJ|THIAMINE-MONOPHOSPHATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EKQQKNSTLP 10
E++ KN T+P
Sbjct: 248 EEKMKNLTIP 257




214|Sequence|1066|1075|NSTLPKAIVS

>sp|AROC_CALMQ|CHORISMATE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 STLPKAIVS 10
ST PKAI++
Sbjct: 332 STAPKAILA 340




215|Sequence|1071|1080|KAIVSSRDSD

>sp|TRPB_THEAC|TRYPTOPHAN synthase beta chain|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KAIVSSRDSD 10
K IVS+RD D
Sbjct: 349 KGIVSARDYD 358




216|Sequence|1076|1085|SRDSDIIDFR

>sp|DTDA_SULTO|D-AMINOACYL-TRNA deacylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 DSDIIDFR 10
+ DIIDFR
Sbjct: 28 NEDIIDFR 35


>sp|COFC_METJA|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SRDSDIIDF 9
SRD +I+DF
Sbjct: 56 SRDEEILDF 64


>sp|COFC_METFA|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocaldococcus fervens (strain DSM 4213

Query: 1 SRDSDIIDF 9
SRD +I+DF
Sbjct: 50 SRDDEILDF 58


>sp|MAP2_SACS2|METHIONINE aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SRDSDIIDF 9
SR++++IDF
Sbjct: 220 SRENELIDF 228


>sp|TYW32_PYRHO|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 3 DSDIIDF 9
DSDIID
Sbjct: 21 DSDIIDL 27


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DSDIID 8
DSDIID
Sbjct: 308 DSDIID 313




217|Sequence|1081|1090|IIDFRLFAKL

>sp|RNP3_METMP|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain DSM 14266

Query: 1 IIDFRLFAK 9
IID+RL+ K
Sbjct: 210 IIDYRLYLK 218


>sp|RNP3_METM6|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C6 /

Query: 1 IIDFRLFAK 9
IID+RL+ K
Sbjct: 210 IIDYRLYLK 218


>sp|RNP3_METM7|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C7 /

Query: 1 IIDFRLFAK 9
IID+RL+ K
Sbjct: 210 IIDYRLYLK 218


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IIDFRLFAKL 10
+ID+ FAKL
Sbjct: 608 VIDYEDFAKL 617


>sp|Y1505_METJA|PUTATIVE ATP-dependent RNA helicase MJ1505|Methanocaldococcus jannaschii

Query: 1 IIDFRLFAKL 10
IID RLF++L
Sbjct: 625 IIDKRLFSQL 634


>sp|ENO_METKA|ENOLASE kandleri (strain AV19 /

Query: 3 DFRLFAKL 10
DFR FAK+
Sbjct: 293 DFRGFAKI 300


>sp|RNP3_METM5|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C5 /

Query: 1 IIDFRLFAK 9
I+D+RL+ K
Sbjct: 210 IVDYRLYLK 218


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DFRLFAK 9
DFR FAK
Sbjct: 557 DFRKFAK 563


>sp|HMGCS_PYRHO|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IIDFRLFAK 9
+ID+ L+AK
Sbjct: 335 VIDYALYAK 343


>sp|HMGCS_PYRFU|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IIDFRLFAK 9
+ID+ L+AK
Sbjct: 335 VIDYALYAK 343


>sp|HMGCS_PYRAB|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 IIDFRLFAK 9
+ID+ L+AK
Sbjct: 335 VIDYALYAK 343


>sp|GLYA_METHJ|SERINE hydroxymethyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 2 IDFRLFAKL 10
IDF+ FA++
Sbjct: 178 IDFKAFAEI 186


>sp|Y2340_ARCFU|UNCHARACTERIZED protein AF_2340|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DFRLFAK 9
DFR+FA+
Sbjct: 613 DFRIFAE 619




218|Sequence|1086|1095|LFAKLNAFCV

>sp|ASSY_METMA|ARGININOSUCCINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LFAKLNAF 8
LFA LNAF
Sbjct: 317 LFADLNAF 324


>sp|Y447_METJA|UNCHARACTERIZED protein MJ0447|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 AKLNAFC 9
AKLN FC
Sbjct: 72 AKLNLFC 78


>sp|TRXB_METJA|PUTATIVE thioredoxin reductase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 AKLNAFCV 10
KLNA C+
Sbjct: 24 GKLNALCI 31


>sp|ASSY_METBF|ARGININOSUCCINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LFAKLNAF 8
L+A LNAF
Sbjct: 317 LYADLNAF 324


>sp|ASSY_METBA|ARGININOSUCCINATE synthase|Methanosarcina barkeri

Query: 1 LFAKLNAF 8
L+A LNAF
Sbjct: 318 LYADLNAF 325


>sp|ASSY_METAC|ARGININOSUCCINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LFAKLNAF 8
L+A LNAF
Sbjct: 317 LYADLNAF 324


>sp|HEM1_ARCFU|GLUTAMYL-TRNA reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LFAKLNA 7
L+AKLNA
Sbjct: 350 LYAKLNA 356




219|Sequence|1091|1100|NAFCVIVCNE

>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 4 CVIVCN 9
C+IVCN
Sbjct: 226 CIIVCN 231


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 4 CVIVCN 9
C+IVCN
Sbjct: 241 CIIVCN 246


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 1 NAFCVIVCN 9
N C+++CN
Sbjct: 225 NDTCIVICN 233


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 1 NAFCVIVCN 9
N C+++CN
Sbjct: 225 NDTCIVICN 233


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 1 NAFCVIVCN 9
N C+++CN
Sbjct: 225 NDTCIVICN 233


>sp|CBIG_METJA|PROBABLE cobalt-precorrin-5A hydrolase|Methanocaldococcus jannaschii

Query: 5 VIVCNE 10
VI+CNE
Sbjct: 74 VIICNE 79


>sp|PUR5_METVS|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 AFCVIVCNE 10
FCVIV E
Sbjct: 292 GFCVIVSKE 300


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 1 NAFCVIVCN 9
N C+ +CN
Sbjct: 225 NNTCITICN 233


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 4 CVIVCN 9
C+ VCN
Sbjct: 228 CITVCN 233


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 4 CVIVCN 9
C+ VCN
Sbjct: 228 CITVCN 233


>sp|Y182_ARCFU|UNCHARACTERIZED protein AF_0182|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NAFCVIVCNE 10
N CV +C+E
Sbjct: 308 NPACVCMCSE 317


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 4 CVIVCN 9
CVI+C+
Sbjct: 226 CVIICS 231


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 4 CVIVCN 9
C+IVC+
Sbjct: 226 CIIVCS 231


>sp|Y433_METJA|UNCHARACTERIZED protein MJ0433|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AFCVIVCNE 10
A C ++C E
Sbjct: 167 ALCFLICKE 175


>sp|MCH_METAC|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 CVIVCNE 10
CVI C E
Sbjct: 228 CVIYCGE 234


>sp|MCH_METMA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 CVIVCNE 10
CVI C E
Sbjct: 228 CVIYCGE 234


>sp|MCH_METBF|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina barkeri (strain Fusaro /

Query: 4 CVIVCNE 10
CVI C E
Sbjct: 228 CVIYCGE 234




220|Sequence|1096|1105|IVCNEKNNIA

>sp|Y1051_METJA|UNCHARACTERIZED protein MJ1051|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IVCNEKNNI 9
IVCNEK+ I
Sbjct: 483 IVCNEKDAI 491


>sp|KAE1B_METVS|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 IVCNEKN 7
I+CNE+N
Sbjct: 271 IMCNEQN 277


>sp|CSG_HALGI|CELL surface glycoprotein|Haloferax gibbonsii

Query: 2 VCNEKNNIA 10
V NE NN A
Sbjct: 225 VANESNNTA 233




221|Sequence|1101|1110|KNNIAEIKIQ

>sp|Y946_ARCFU|UNCHARACTERIZED protein AF_0946|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 IAEIKIQ 10
IAE+KIQ
Sbjct: 490 IAEVKIQ 496


>sp|PYLB_METBF|3-METHYLORNITHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KNNIAEIKI 9
K+N++E+KI
Sbjct: 253 KSNLSELKI 261


>sp|ASPG_PYRFU|L-ASPARAGINASE furiosus (strain ATCC 43587

Query: 2 NNIAEIKI 9
NN+ EIK+
Sbjct: 307 NNVEEIKV 314


>sp|JAMM1_PYRFU|DESAMPYLASE furiosus (strain ATCC 43587

Query: 1 KNNIAEIKI 9
KN I+E+KI
Sbjct: 129 KNKISEVKI 137




222|Sequence|1106|1115|EIKIQGLDSS

>sp|TRUD_METM5|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain C5

Query: 2 IKIQGLDSS 10
IKI+GLD S
Sbjct: 144 IKIRGLDLS 152


>sp|GATE_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C6 /

Query: 1 EIKIQGLDS 9
EIK +GLD+
Sbjct: 510 EIKREGLDT 518


>sp|GATE_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus vannielii (strain ATCC

Query: 1 EIKIQGLDS 9
EIK +GLD+
Sbjct: 510 EIKREGLDT 518


>sp|GATE_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain DSM

Query: 1 EIKIQGLDS 9
EIK +GLD+
Sbjct: 510 EIKREGLDT 518


>sp|GATE_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C5 /

Query: 1 EIKIQGLDS 9
EIK +GLD+
Sbjct: 510 EIKREGLDT 518


>sp|Y619_METBF|UPF0215 protein Mbar_A0619|Methanosarcina barkeri (strain Fusaro /

Query: 1 EIKIQGLDSS 10
EI+I G+D S
Sbjct: 10 EIRILGIDDS 19


>sp|Y1007_METMA|UPF0215 protein MM_1007|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EIKIQGLDSS 10
EI+I G+D S
Sbjct: 10 EIRILGIDDS 19


>sp|PDXT_METPE|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosphaerula palustris

Query: 1 EIKIQGLDS 9
+I +QGLD+
Sbjct: 124 DIPVQGLDA 132




223|Sequence|1111|1120|GLDSSLSLQS

>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 GLDSSLSL 8
GLDSSL+L
Sbjct: 530 GLDSSLAL 537


>sp|NADE_AERPE|NH(3)-DEPENDENT NAD(+) synthetase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GLDSSLSL 8
G+DSSL+L
Sbjct: 47 GVDSSLAL 54




224|Sequence|1116|1125|LSLQSRKQSL

***** No hits found ******


225|Sequence|1121|1130|RKQSLFARLE

>sp|GVPG_HALMT|GAS vesicle protein G|Haloferax mediterranei (strain ATCC 33500

Query: 1 RKQSLFARLE 10
RKQ L ARLE
Sbjct: 57 RKQQLEARLE 66




226|Sequence|1126|1135|FARLENIIVT

>sp|APGM_PYRHO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FARLENIIVT 10
FA LEN I+T
Sbjct: 102 FATLENGIIT 111


>sp|APGM_PYRFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FARLENIIVT 10
FA LEN ++T
Sbjct: 101 FATLENGVIT 110


>sp|TSGDD_HALVD|GLUCOSE import ATP-binding protein TsgD13|Haloferax volcanii (strain ATCC

Query: 1 FARLENII 8
F R+ENI+
Sbjct: 6 FLRMENIV 13


>sp|APGM_THEKO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermococcus kodakarensis (strain ATCC

Query: 1 FARLENIIVT 10
FA +EN I+T
Sbjct: 101 FATIENGIIT 110


>sp|APGM_THEGJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermococcus gammatolerans (strain DSM

Query: 1 FARLENIIVT 10
FA +EN I+T
Sbjct: 101 FATIENGIIT 110


>sp|AROB_SULAC|3-DEHYDROQUINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FARLENIIVT 10
F R++NII T
Sbjct: 137 FGRIKNIIGT 146


>sp|TBP_PYRAE|TATA-BOX-BINDING protein|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 RLENIIVT 10
R+ENI+ T
Sbjct: 9 RIENIVAT 16


>sp|TBP_PYRIL|TATA-BOX-BINDING protein|Pyrobaculum islandicum (strain DSM 4184

Query: 3 RLENIIVT 10
R+ENI+ T
Sbjct: 9 RIENIVAT 16


>sp|TBP_PYRCJ|TATA-BOX-BINDING protein|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 RLENIIVT 10
R+ENI+ T
Sbjct: 9 RIENIVAT 16


>sp|TBP_PYRNV|TATA-BOX-BINDING protein|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 RLENIIVT 10
R+ENI+ T
Sbjct: 9 RIENIVAT 16




227|Sequence|1131|1140|NIIVTDVDPK

>sp|SIHH_METAC|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NIIVTDVDP 9
N+IVT+VDP
Sbjct: 228 NVIVTEVDP 236


>sp|SAHH_THEAC|ADENOSYLHOMOCYSTEINASE acidophilum (strain ATCC 25905

Query: 1 NIIVTDVDP 9
N+IVT++DP
Sbjct: 224 NVIVTEIDP 232


>sp|SAHH_THEVO|ADENOSYLHOMOCYSTEINASE volcanium (strain ATCC 51530

Query: 1 NIIVTDVDP 9
N+IVT++DP
Sbjct: 224 NVIVTEIDP 232


>sp|SAHH_HALSA|ADENOSYLHOMOCYSTEINASE salinarum (strain ATCC 700922

Query: 1 NIIVTDVDPK 10
N+IVT+V+P+
Sbjct: 239 NVIVTEVEPR 248


>sp|SAHH_HALS3|ADENOSYLHOMOCYSTEINASE salinarum (strain ATCC 29341

Query: 1 NIIVTDVDPK 10
N+IVT+V+P+
Sbjct: 239 NVIVTEVEPR 248


>sp|SAHH_HALWD|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16790

Query: 1 NIIVTDVDPK 10
N+IVT+V+P+
Sbjct: 244 NVIVTEVEPR 253


>sp|SAHH_HALWC|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16854

Query: 1 NIIVTDVDPK 10
N+IVT+V+P+
Sbjct: 244 NVIVTEVEPR 253


>sp|SIHH_METTH|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 NIIVTDVDP 9
++IVT+VDP
Sbjct: 231 SVIVTEVDP 239


>sp|SIHH_METKA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanopyrus kandleri (strain AV19 /

Query: 1 NIIVTDVDP 9
N+IV +VDP
Sbjct: 237 NVIVVEVDP 245


>sp|SIHH_METMP|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NIIVTDVDP 9
N+I+T+V+P
Sbjct: 230 NVIITEVNP 238


>sp|SIHH_METMA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NIIVTDVDP 9
++IVT++DP
Sbjct: 228 SVIVTEIDP 236


>sp|SAHH_AERPE|ADENOSYLHOMOCYSTEINASE pernix (strain ATCC 700893

Query: 2 IIVTDVDP 9
++VT+VDP
Sbjct: 234 VVVTEVDP 241


>sp|SAHH_SACS2|ADENOSYLHOMOCYSTEINASE solfataricus (strain ATCC 35092

Query: 2 IIVTDVDP 9
+IVT+VDP
Sbjct: 232 VIVTEVDP 239


>sp|MPTE_METTH|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Methanothermobacter thermautotrophicus (strain

Query: 1 NIIVTDVDPK 10
+IIVTD+D K
Sbjct: 96 DIIVTDLDGK 105


>sp|FDHD_THEVO|SULFUR carrier protein FdhD|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NIIVTDVDPK 10
NI+ ++DP+
Sbjct: 96 NIVTVNIDPR 105


>sp|SAHH_PYRAE|ADENOSYLHOMOCYSTEINASE aerophilum (strain ATCC 51768

Query: 2 IIVTDVDP 9
+IV +VDP
Sbjct: 254 VIVVEVDP 261


>sp|RS13_METMP|SMALL ribosomal subunit protein uS13|Methanococcus maripaludis (strain

Query: 2 IIVTDVDPK 10
I VT++DPK
Sbjct: 42 IRVTELDPK 50


>sp|SAHH_PYRHO|ADENOSYLHOMOCYSTEINASE horikoshii (strain ATCC 700860

Query: 2 IIVTDVDP 9
+IV +VDP
Sbjct: 236 VIVVEVDP 243


>sp|SAHH_PYRFU|ADENOSYLHOMOCYSTEINASE furiosus (strain ATCC 43587

Query: 2 IIVTDVDP 9
+IV +VDP
Sbjct: 236 VIVVEVDP 243


>sp|KPTA_HYPBU|PROBABLE RNA 2'-phosphotransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 NIIVTDVDPK 10
N++V +DP+
Sbjct: 179 NVVVLVIDPR 188


>sp|COBQ_THEON|PROBABLE cobyric acid synthase|Thermococcus onnurineus (strain NA1)

Query: 2 IIVTDVD 8
I+VTD+D
Sbjct: 162 ILVTDID 168


>sp|COBQ_THEGJ|PROBABLE cobyric acid synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 IIVTDVD 8
I+VTD+D
Sbjct: 162 ILVTDID 168


>sp|ADEC_METTH|ADENINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 NIIVTDVDPK 10
N+IV VDP+
Sbjct: 429 NLIVVGVDPE 438


>sp|RLME_METPE|RIBOSOMAL RNA large subunit methyltransferase|Methanosphaerula palustris

Query: 1 NIIVTDVDPK 10
N+++ D PK
Sbjct: 103 NVVLCDASPK 112


>sp|SAHH_PYRAB|ADENOSYLHOMOCYSTEINASE abyssi (strain GE5 /

Query: 2 IIVTDVDP 9
+IV +VDP
Sbjct: 237 VIVVEVDP 244


>sp|APGM_METKA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanopyrus kandleri (strain AV19 /

Query: 4 VTDVDPK 10
VTD DPK
Sbjct: 171 VTDADPK 177


>sp|SAHH_THEKO|ADENOSYLHOMOCYSTEINASE kodakarensis (strain ATCC BAA-918

Query: 2 IIVTDVDP 9
+IV +VDP
Sbjct: 236 VIVVEVDP 243


>sp|APGM_METMP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain DSM 14266

Query: 4 VTDVDPK 10
+TD DPK
Sbjct: 156 ITDADPK 162


>sp|NIFH2_METIV|NITROGENASE iron protein 2|Methanobacterium ivanovii

Query: 1 NIIVTDVDPK 10
N++V DPK
Sbjct: 31 NVLVIGCDPK 40




228|Sequence|1136|1145|DVDPKTVHKK

>sp|ARGB_METVS|ACETYLGLUTAMATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 3 DPKTVHKK 10
DPKT+H+K
Sbjct: 222 DPKTLHRK 229


>sp|APGM1_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DVDPKTVHKK 10
D DPK V KK
Sbjct: 161 DTDPKAVGKK 170


>sp|ILVC_METMJ|KETOL-ACID reductoisomerase (NADP(+))|Methanoculleus marisnigri (strain ATCC

Query: 1 DVDPKTVHKK 10
D DP+T+ K
Sbjct: 9 DADPRTLEDK 18


>sp|DCDA_ARCFU|DIAMINOPIMELATE decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DVDPKT 6
DVDPKT
Sbjct: 148 DVDPKT 153


>sp|ARGB_METM7|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain C7 /

Query: 3 DPKTVHKK 10
DP T+H+K
Sbjct: 222 DPSTLHRK 229


>sp|ARGDC_SULTO|ARGININE decarboxylase proenzyme|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DVDPKTVHKK 10
D+DPK ++ K
Sbjct: 25 DIDPKILNDK 34


>sp|GGR2_METTH|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 DVDPKTV 7
DVDP+T+
Sbjct: 185 DVDPETM 191


>sp|SECG_METAR|PREPROTEIN translocase subunit SecG|Methanocella arvoryzae (strain DSM 22066

Query: 2 VDPKTV 7
+DPKTV
Sbjct: 32 IDPKTV 37


>sp|SECG_HALLT|PREPROTEIN translocase subunit SecG|Halorubrum lacusprofundi (strain ATCC

Query: 2 VDPKTV 7
+DPKTV
Sbjct: 30 IDPKTV 35


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 DPKTVH 8
DPKT+H
Sbjct: 98 DPKTIH 103


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 2 VDPKTVHK 9
+ P+TVHK
Sbjct: 795 LSPETVHK 802


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 DPKTVH 8
DPKT+H
Sbjct: 98 DPKTIH 103


>sp|ARGB_METMP|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 3 DPKTVHKK 10
DP T+H++
Sbjct: 222 DPSTLHRR 229


>sp|ASPD_METBU|L-ASPARTATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DVDPKTVHKK 10
DV P T+H K
Sbjct: 78 DVVPTTLHAK 87


>sp|Y3270_HALS3|UNCHARACTERIZED solute-binding protein OE_3270R|Halobacterium salinarum (strain

Query: 1 DVDPKTVHK 9
D+DP TV K
Sbjct: 179 DLDPATVTK 187


>sp|Y1595_HALSA|UNCHARACTERIZED solute-binding protein VNG_1595C|Halobacterium salinarum (strain

Query: 1 DVDPKTVHK 9
D+DP TV K
Sbjct: 179 DLDPATVTK 187


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 2 VDPKTVH 8
+DP+T H
Sbjct: 194 IDPRTTH 200


>sp|APGM_SULTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DVDPKTVHKK 10
D DP V+KK
Sbjct: 166 DTDPHEVNKK 175


>sp|APGM_METLZ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanocorpusculum labreanum (strain ATCC

Query: 2 VDPKTVH 8
V PKT+H
Sbjct: 174 VQPKTIH 180


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 DVDPKTVHKK 10
D+D KTV+ K
Sbjct: 1012 DIDDKTVYIK 1021


>sp|ARGB_META3|ACETYLGLUTAMATE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 DPKTVHKK 10
DP T++KK
Sbjct: 222 DPSTIYKK 229




229|Sequence|1141|1150|TVHKKAVSIM

>sp|Y738_ARCFU|UPF0058 protein AF_0738|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TVHKKAVSIM 10
T HKKA+S++
Sbjct: 48 TEHKKAISLL 57




230|Sequence|1146|1155|AVSIMGNEVF

>sp|G3P_METS5|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Metallosphaera sedula (strain ATCC 51363

Query: 1 AVSIMGNEVF 10
+VS+ GNEVF
Sbjct: 284 SVSVRGNEVF 293


>sp|TRUD_PYRAE|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum aerophilum (strain ATCC

Query: 4 IMGNEVF 10
IMGN+VF
Sbjct: 378 IMGNDVF 384


>sp|RL3_METPE|LARGE ribosomal subunit protein uL3|Methanosphaerula palustris (strain

Query: 1 AVSIMGNEV 9
A SI+GNEV
Sbjct: 179 AQSIIGNEV 187


>sp|RFCS_METKA|REPLICATION factor C small subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 VSIMGNEVF 10
VS+ GNE+F
Sbjct: 368 VSVPGNEMF 376


>sp|PURK_SACS2|N5-CARBOXYAMINOIMIDAZOLE ribonucleotide synthase|Saccharolobus solfataricus (strain ATCC

Query: 2 VSIMGNEVF 10
V IMG EVF
Sbjct: 239 VGIMGVEVF 247


>sp|RL3_METST|LARGE ribosomal subunit protein uL3|Methanosphaera stadtmanae (strain

Query: 1 AVSIMGNEV 9
A+SI+G E+
Sbjct: 176 AISILGKEI 184


>sp|RL6_METJA|LARGE ribosomal subunit protein uL6|Methanocaldococcus jannaschii (strain

Query: 2 VSIMGNEVF 10
VS+ GNEV
Sbjct: 101 VSVKGNEVI 109




231|Sequence|1151|1160|GNEVFRFNLD

>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 1 GNEVFRF 7
GNEVFRF
Sbjct: 252 GNEVFRF 258


>sp|KHSE_METJA|HOMOSERINE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NEVFRFNLD 10
NE+F+ NLD
Sbjct: 106 NELFKLNLD 114


>sp|Y1638_METJA|UNCHARACTERIZED protein MJ1638|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NEVFRFNL 9
+E+FRFNL
Sbjct: 180 DEIFRFNL 187


>sp|PURA_THEVO|ADENYLOSUCCINATE synthetase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GNEVFRFNL 9
GNE ++F+L
Sbjct: 55 GNETYKFHL 63


>sp|KHSE_SULTO|HOMOSERINE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GNEVFRFNL 9
NE+F+ NL
Sbjct: 103 ANEIFKLNL 111


>sp|ASSY_PYRFU|ARGININOSUCCINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GNEVFRFNL 9
GN+ RFNL
Sbjct: 119 GNDQVRFNL 127


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GNEVFRF 7
G E+FRF
Sbjct: 1170 GREIFRF 1176


>sp|DPOL1_METTH|DNA polymerase PolB subunit 1|Methanothermobacter thermautotrophicus

Query: 2 NEVFRFNLD 10
+E+FR++LD
Sbjct: 342 DELFRYSLD 350


>sp|FAEHP_METMJ|BIFUNCTIONAL enzyme Fae/Hps|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 NEVFRFN 8
N+++RFN
Sbjct: 123 NKIYRFN 129


>sp|SURE_AERPE|5'-NUCLEOTIDASE SurE|Aeropyrum pernix (strain ATCC 700893

Query: 1 GNEVFRF 7
GN V+RF
Sbjct: 52 GNRVYRF 58


>sp|Y1353_ARCFU|UNCHARACTERIZED protein AF_1353|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GNEVFRFN 8
GNEV FN
Sbjct: 199 GNEVLSFN 206


>sp|DNAG_SULAC|DNA primase DnaG|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 NEVFRFNLD 10
N VF+FN++
Sbjct: 4 NIVFKFNVE 12


>sp|Y954_METJA|UNCHARACTERIZED protein MJ0954|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GNEVFRFN 8
GNE++ FN
Sbjct: 263 GNEIYLFN 270


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 NEVFRFNLD 10
N+V+ FN D
Sbjct: 7616 NDVYTFNRD 7624




232|Sequence|1156|1165|RFNLDLYPDA

>sp|SYT_STAMF|THREONINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 RFNLDLYPD 9
+FN D YPD
Sbjct: 168 KFNYDKYPD 176


>sp|IF2P_METTP|PROBABLE translation initiation factor IF-2|Methanothrix thermoacetophila

Query: 2 FNLDLYPDA 10
FN+++ PDA
Sbjct: 421 FNVEILPDA 429


>sp|IF2P_METMA|PROBABLE translation initiation factor IF-2|Methanosarcina mazei (strain

Query: 2 FNLDLYPDA 10
FN+ ++PDA
Sbjct: 410 FNVKVHPDA 418


>sp|IF2P_METBF|PROBABLE translation initiation factor IF-2|Methanosarcina barkeri (strain

Query: 2 FNLDLYPDA 10
FN+ ++PDA
Sbjct: 410 FNVKVHPDA 418


>sp|IF2P_METAC|PROBABLE translation initiation factor IF-2|Methanosarcina acetivorans

Query: 2 FNLDLYPDA 10
FN+ ++PDA
Sbjct: 416 FNVKVHPDA 424


>sp|IF2P_METBU|PROBABLE translation initiation factor IF-2|Methanococcoides burtonii

Query: 2 FNLDLYPDA 10
FN+++ PDA
Sbjct: 410 FNVNILPDA 418


>sp|IF2P_METLZ|PROBABLE translation initiation factor IF-2|Methanocorpusculum labreanum

Query: 2 FNLDLYPDA 10
FN+ L PDA
Sbjct: 406 FNVPLLPDA 414


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 LDLYPDA 10
L+LYPDA
Sbjct: 786 LNLYPDA 792


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 FNLDLYPD 9
F++D YPD
Sbjct: 143 FDVDTYPD 150


>sp|NADK_THEKO|NAD kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RFNLDLYP 8
RFN ++YP
Sbjct: 261 RFNREIYP 268


>sp|RS3A_METTP|SMALL ribosomal subunit protein eS1|Methanothrix thermoacetophila (strain

Query: 1 RFNLDLYPDA 10
+ +LD+Y DA
Sbjct: 164 KLSLDIYKDA 173


>sp|RFCL_PYRFU|REPLICATION factor C large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FNLDLYPD 9
+NLD+ PD
Sbjct: 246 WNLDMSPD 253


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 1 RFNLDLYPDA 10
RF D YPD+
Sbjct: 108 RFGGDGYPDS 117


>sp|GLPA2_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A2|Haloferax volcanii

Query: 1 RFNLDLYPD 9
R +LYPD
Sbjct: 479 RLGAELYPD 487


>sp|Y772_ARCFU|UNCHARACTERIZED protein AF_0772|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RFNLDLYP 8
RFNL +YP
Sbjct: 49 RFNLLVYP 56


>sp|SDO1_METJA|RIBOSOME maturation protein SDO1 homolog|Methanocaldococcus jannaschii

Query: 1 RFNLDLYPDA 10
R N+D+Y A
Sbjct: 138 RINIDIYKSA 147


>sp|IF2P_METAR|PROBABLE translation initiation factor IF-2|Methanocella arvoryzae (strain

Query: 2 FNLDLYPDA 10
FN+ + PDA
Sbjct: 413 FNVTILPDA 421


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RFNLDLYP 8
R ++DLYP
Sbjct: 275 RVHIDLYP 282


>sp|CCA_METM7|CCA-ADDING enzyme|Methanococcus maripaludis (strain C7 /

Query: 1 RFNLDLYP 8
+FNLD+ P
Sbjct: 120 KFNLDIVP 127


>sp|SYP_PICTO|PROLINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 FNLDLYPD 9
+N+D+ PD
Sbjct: 189 YNIDMRPD 196


>sp|CCA_METM5|CCA-ADDING enzyme|Methanococcus maripaludis (strain C5 /

Query: 1 RFNLDLYP 8
+FNLD+ P
Sbjct: 120 KFNLDIVP 127


>sp|Y303_ARCFU|UNCHARACTERIZED protein AF_0303|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RFNLDLYPD 9
RF++ L+PD
Sbjct: 305 RFSIALHPD 313


>sp|CCA_METMP|CCA-ADDING enzyme|Methanococcus maripaludis (strain DSM 14266

Query: 1 RFNLDLYP 8
+FNLD+ P
Sbjct: 120 KFNLDIVP 127


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 RFNLDLYPD 9
++N+ L+PD
Sbjct: 453 QYNIPLHPD 461




233|Sequence|1161|1170|LYPDATEGDL

>sp|FAU1_PYRHO|PROBABLE ribonuclease FAU-1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PDATEGD 9
PDATEGD
Sbjct: 124 PDATEGD 130


>sp|FAU1_PYRAB|PROBABLE ribonuclease FAU-1|Pyrococcus abyssi (strain GE5 /

Query: 3 PDATEGD 9
PDA EGD
Sbjct: 124 PDAVEGD 130


>sp|FAU1_PYRFU|PROBABLE ribonuclease FAU-1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PDATEGD 9
PDA EGD
Sbjct: 124 PDAAEGD 130


>sp|PUR2_PYRAB|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 YPDATEGDL 10
YP A EGD+
Sbjct: 213 YPHAYEGDV 221


>sp|PUR2_PYRFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YPDATEGDL 10
YP A EGD+
Sbjct: 214 YPHAYEGDV 222


>sp|KPTA_THEON|PROBABLE RNA 2'-phosphotransferase|Thermococcus onnurineus (strain NA1)

Query: 1 LYPDATE 7
+YPD TE
Sbjct: 45 IYPDVTE 51


>sp|FLA3_PYRHO|PROBABLE flagellin PH0549|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YPDATEGDL 10
YP T+GDL
Sbjct: 237 YPTLTKGDL 245


>sp|PUR2_PYRHO|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YPDATEGDL 10
YP A EGD+
Sbjct: 213 YPHAYEGDV 221


>sp|RL23_NATPD|LARGE ribosomal subunit protein uL23|Natronomonas pharaonis (strain

Query: 2 YPDATEGDL 10
+P+AT+GD+
Sbjct: 27 HPEATKGDI 35


>sp|DEOC_METAR|DEOXYRIBOSE-PHOSPHATE aldolase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LYPDATEGDL 10
L PDAT+ D+
Sbjct: 15 LRPDATQEDI 24


>sp|PUR2_THEKO|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 YPDATEGDL 10
YP A EGD+
Sbjct: 212 YPHAYEGDV 220


>sp|SPSS_METBF|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 YPDATEGDL 10
YPD + G+L
Sbjct: 168 YPDGSYGNL 176


>sp|SPSS1_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocella arvoryzae (strain DSM 22066

Query: 2 YPDATEGDL 10
YPD + G+L
Sbjct: 167 YPDGSYGNL 175


>sp|FLA2_PYRHO|PROBABLE flagellin PH0548|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YPDATEGDL 10
YP +GDL
Sbjct: 149 YPTLNQGDL 157


>sp|HIS1_METKA|ATP phosphoribosyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 3 PDATEGDL 10
PDAT+G++
Sbjct: 186 PDATDGEV 193


>sp|AROA_METB6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanoregula boonei (strain DSM 21154

Query: 1 LYPDATEGD 9
L PD+ +GD
Sbjct: 261 LAPDSVQGD 269


>sp|SYFB_METBU|PHENYLALANINE--TRNA ligase beta subunit|Methanococcoides burtonii (strain DSM 6242

Query: 1 LYPDATE 7
+YPD TE
Sbjct: 258 VYPDGTE 264


>sp|GUAAB_METBU|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcoides

Query: 1 LYPDATEGD 9
+YPD E D
Sbjct: 126 IYPDRIESD 134


>sp|Y1402_METJA|UNCHARACTERIZED protein MJ1402|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LYPDAT 6
+YPDAT
Sbjct: 172 IYPDAT 177


>sp|Y583_METTM|PUTATIVE ABC transporter ATP-binding protein|Methanothermobacter

Query: 2 YPDATE 7
YPD TE
Sbjct: 13 YPDGTE 18


>sp|PUR2_METKA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 YPDATEGD 9
YP+++EG+
Sbjct: 349 YPESSEGE 356




234|Sequence|1166|1175|TEGDLYTDMS

>sp|HPPA1_METMA|K(+)-STIMULATED pyrophosphate-energized sodium pump|Methanosarcina mazei (strain

Query: 3 GDLYTDM 9
G++YTDM
Sbjct: 150 GNIYTDM 156


>sp|HIS7_METAC|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EGDLYTD 8
EGDLY D
Sbjct: 56 EGDLYVD 62


>sp|COFF_METJA|COENZYME gamma-F420-2:alpha-L-glutamate ligase|Methanocaldococcus jannaschii

Query: 2 EGDLYTDM 9
E DLY DM
Sbjct: 180 ENDLYRDM 187


>sp|HIS7_METMA|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EGDLYTD 8
EGDLY D
Sbjct: 56 EGDLYVD 62


>sp|GVPF1_HALSA|GAS vesicle protein F1|Halobacterium salinarum (strain ATCC 700922

Query: 1 TEGDLYTD 8
TE DL+TD
Sbjct: 147 TENDLFTD 154


>sp|HIS7_METBF|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 2 EGDLYTD 8
EGDLY D
Sbjct: 56 EGDLYVD 62


>sp|RIO2_METJA|RIO-TYPE serine/threonine-protein kinase Rio2|Methanocaldococcus

Query: 2 EGDLYT 7
EGD+YT
Sbjct: 76 EGDVYT 81


>sp|Y796_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 TEGDLYTD 8
TEG++Y D
Sbjct: 58 TEGEVYID 65


>sp|MUTS_HALWD|DNA mismatch repair protein MutS|Haloquadratum walsbyi (strain DSM

Query: 1 TEGDLYTDMS 10
TEG+ YT++S
Sbjct: 834 TEGEDYTEIS 843


>sp|THPR_METTH|RNA 2',3'-cyclic phosphodiesterase|Methanothermobacter

Query: 3 GDLYTDM 9
G +YTDM
Sbjct: 173 GPIYTDM 179


>sp|AROE_METVS|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus vannielii (strain ATCC 35089

Query: 3 GDLYTDMS 10
GDL TD+S
Sbjct: 182 GDLSTDIS 189


>sp|AATB_NITMS|A-TYPE ATP synthase subunit B|Nitrosopumilus maritimus (strain SCM1)

Query: 3 GDLYTDMS 10
G LYTD+S
Sbjct: 279 GYLYTDLS 286




235|Sequence|1171|1180|YTDMSKVDGV

>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YTDMSKVDG 9
Y DM K DG
Sbjct: 735 YIDMCKADG 743


>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 1 YTDMSKVDGV 10
Y D+ VDGV
Sbjct: 391 YDDIDTVDGV 400


>sp|Y1437_METM6|UPF0280 protein MmarC6_1437|Methanococcus maripaludis (strain C6 /

Query: 3 DMSKVDGV 10
++SK+DGV
Sbjct: 207 NISKIDGV 214




236|Sequence|1176|1185|KVDGVLSLNV

>sp|RRP41_HYPBU|EXOSOME complex component Rrp41|Hyperthermus butylicus (strain DSM 5456

Query: 1 KVDGVLSLNV 10
KVDGVL L++
Sbjct: 174 KVDGVLVLDI 183


>sp|MSRA_METTH|PEPTIDE methionine sulfoxide reductase MsrA|Methanothermobacter

Query: 1 KVDGVLSLNV 10
KVDGV+S V
Sbjct: 26 KVDGVVSTRV 35


>sp|RS4_PICTO|SMALL ribosomal subunit protein uS4|Picrophilus torridus (strain ATCC

Query: 2 VDGVLSLNV 10
+D VLSLN+
Sbjct: 92 LDDVLSLNI 100


>sp|RS4_METMP|SMALL ribosomal subunit protein uS4|Methanococcus maripaludis (strain

Query: 2 VDGVLSLNV 10
+D VLSLN+
Sbjct: 90 LDHVLSLNI 98


>sp|RS4_METM7|SMALL ribosomal subunit protein uS4|Methanococcus maripaludis (strain

Query: 2 VDGVLSLNV 10
+D VLSLN+
Sbjct: 90 LDHVLSLNI 98


>sp|RS4_METM5|SMALL ribosomal subunit protein uS4|Methanococcus maripaludis (strain

Query: 2 VDGVLSLNV 10
+D VLSLN+
Sbjct: 90 LDHVLSLNI 98


>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KVDGVLSLNV 10
KV+G L LN+
Sbjct: 8 KVEGTLELNL 17


>sp|MSRA_METBU|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcoides burtonii

Query: 1 KVDGVLSLNV 10
KV+GV+S V
Sbjct: 20 KVEGVISTKV 29


>sp|KAD_METAR|ADENYLATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 KVDGVLSLNV 10
K+DGV++++V
Sbjct: 106 KLDGVINIDV 115




237|Sequence|1181|1190|LSLNVGCIQI

>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LNVGCIQI 10
+NVGC+ I
Sbjct: 213 VNVGCVGI 220


>sp|GSA_METTH|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 NVGCIQ 9
N+GCI+
Sbjct: 203 NIGCIE 208


>sp|GSA_METS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 NVGCIQ 9
N+GCI+
Sbjct: 203 NIGCIE 208


>sp|HUTI_PICTO|IMIDAZOLONEPROPIONASE torridus (strain ATCC 700027

Query: 4 NVGCIQI 10
N+GCI +
Sbjct: 231 NIGCIDL 237




238|Sequence|1186|1195|GCIQIVYLHK

>sp|Y1065_METJA|UNCHARACTERIZED protein MJ1065|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GCIQIVYLH 9
GC I+ LH
Sbjct: 161 GCRDIILLH 169


>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GCIQIVYLH 9
G ++ VYLH
Sbjct: 561 GPLEFVYLH 569


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GCIQIVYLH 9
GC I Y H
Sbjct: 443 GCASIQYAH 451


>sp|SYR_METST|ARGININE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GCIQIVYLH 9
GC I Y H
Sbjct: 443 GCASIQYAH 451


>sp|SYR_METS3|ARGININE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GCIQIVYLH 9
GC I Y H
Sbjct: 457 GCASIQYAH 465


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GCIQIVYLHK 10
G +++Y HK
Sbjct: 565 GVYRVIYTHK 574


>sp|Y392_METJA|ZINC metalloprotease MJ0392|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GCIQIVYLHK 10
GCI I +HK
Sbjct: 264 GCIGIGNIHK 273




239|Sequence|1191|1200|VYLHKFLMSL

>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 YLHKFLMSL 10
Y H+FL+S+
Sbjct: 161 YCHEFLVSI 169


>sp|ORNAT_THEKO|ORNITHINE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 YLHKFL 7
YLHK+L
Sbjct: 351 YLHKYL 356


>sp|NUCS_METKA|ENDONUCLEASE NucS|Methanopyrus kandleri (strain AV19 /

Query: 1 VYLHKFLMS 9
VY HK L++
Sbjct: 103 VYFHKVLLA 111


>sp|PCKG_PYRHO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YLHKFL 7
YLH+FL
Sbjct: 23 YLHEFL 28


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 2 YLHKFL 7
YLH+FL
Sbjct: 23 YLHEFL 28


>sp|GPMI2_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 VYLHKFL 7
VY+H FL
Sbjct: 146 VYIHAFL 152


>sp|GPMI2_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina acetivorans (strain ATCC

Query: 1 VYLHKFL 7
VY+H FL
Sbjct: 152 VYIHAFL 158


>sp|GPMI1_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 VYLHKFL 7
VY+H FL
Sbjct: 149 VYIHAFL 155


>sp|GPMI1_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 VYLHKFL 7
VY+H FL
Sbjct: 146 VYIHAFL 152


>sp|T1R2_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 VYLHKFL 7
+Y+H+FL
Sbjct: 652 IYIHQFL 658


>sp|KDPC_THEAC|POTASSIUM-TRANSPORTING ATPase KdpC subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 YLHKFL 7
YLH+FL
Sbjct: 98 YLHRFL 103




240|Sequence|1196|1205|FLMSLLNFLN

>sp|GGGPS_METTH|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 FLMSLLNFLN 10
F MSLLN N
Sbjct: 91 FFMSLLNSTN 100


>sp|GGGPS_THESM|GERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus sibiricus (strain DSM 12597

Query: 1 FLMSLLNFLN 10
F MSLLN N
Sbjct: 96 FFMSLLNSRN 105


>sp|GGGPS_THEKO|GERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FLMSLLNFLN 10
F MSLLN N
Sbjct: 96 FFMSLLNSRN 105


>sp|GGGPS_THEGJ|GERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 FLMSLLNFLN 10
F MSLLN N
Sbjct: 96 FFMSLLNSRN 105


>sp|GGGPS_PYRHO|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FLMSLLNFLN 10
F MSLLN N
Sbjct: 98 FFMSLLNSRN 107


>sp|GGGPS_PYRFU|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FLMSLLNFLN 10
F MSLLN N
Sbjct: 95 FFMSLLNSRN 104


>sp|GGGPS_PYRAB|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 FLMSLLNFLN 10
F MSLLN N
Sbjct: 97 FFMSLLNSRN 106


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 MSLLNFLN 10
MSL NF N
Sbjct: 1 MSLANFFN 8


>sp|GGGPS_METTM|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter marburgensis (strain ATCC

Query: 1 FLMSLLN 7
F MSLLN
Sbjct: 91 FFMSLLN 97




241|Sequence|1201|1210|LNFLNNFQTA

>sp|SYC_SACS2|CYSTEINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LNFLNNFQTA 10
LN LNNF TA
Sbjct: 350 LNNLNNFHTA 359


>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LNFLNNF 7
L+FLNNF
Sbjct: 5 LDFLNNF 11


>sp|GLMS_METAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina acetivorans (strain

Query: 3 FLNNFQTA 10
F+N+F+TA
Sbjct: 214 FVNDFETA 221


>sp|SYH_PYRAB|HISTIDINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 FLNNFQTA 10
++N+FQTA
Sbjct: 86 YVNSFQTA 93




242|Sequence|1206|1215|NFQTAKESLS

>sp|RL10E_METAC|LARGE ribosomal subunit protein uL16|Methanosarcina acetivorans (strain

Query: 1 NFQTAKESL 9
NF+ AKE+L
Sbjct: 142 NFKAAKEAL 150


>sp|RL10E_METKA|LARGE ribosomal subunit protein uL16|Methanopyrus kandleri (strain AV19 /

Query: 1 NFQTAKESL 9
NF+ AKE+L
Sbjct: 141 NFEHAKEAL 149


>sp|THIE_METHJ|THIAMINE-PHOSPHATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 NFQTAKESLS 10
+ Q AKESLS
Sbjct: 19 HIQIAKESLS 28


>sp|RL10E_METTH|LARGE ribosomal subunit protein uL16|Methanothermobacter

Query: 1 NFQTAKESL 9
NF+ AKE+L
Sbjct: 129 NFKDAKEAL 137


>sp|RL10E_METAR|LARGE ribosomal subunit protein uL16|Methanocella arvoryzae (strain DSM

Query: 1 NFQTAKESL 9
NF+ AKE++
Sbjct: 141 NFEKAKEAM 149


>sp|TPIS_METFV|TRIOSEPHOSPHATE isomerase|Methanothermus fervidus (strain ATCC 43054

Query: 1 NFQTAKES 8
NF+T KES
Sbjct: 9 NFKTYKES 16




243|Sequence|1211|1220|KESLSAATAQ

***** No hits found ******


244|Sequence|1216|1225|AATAQAAERA

***** No hits found ******


245|Sequence|1221|1230|AAERAATSVK

***** No hits found ******


246|Sequence|1226|1235|ATSVKDLAQR

>sp|HTPX_THEKO|PROTEASE HtpX homolog|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 VKDLAQR 10
V+DLAQR
Sbjct: 76 VRDLAQR 82


>sp|ACDB_METTH|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanothermobacter

Query: 1 ATSVKDL 7
ATS+KDL
Sbjct: 378 ATSIKDL 384


>sp|TRM56_METHJ|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanospirillum hungatei

Query: 2 TSVKDLAQR 10
TS++D+A R
Sbjct: 44 TSIRDVADR 52


>sp|Y1563_METJA|PUTATIVE HTH-type transcriptional regulator MJ1563|Methanocaldococcus

Query: 2 TSVKDLAQR 10
+S+KD+A+R
Sbjct: 91 SSIKDIAKR 99


>sp|DPO41_METMA|DNA polymerase IV 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 SVKDLAQR 10
+VKDLA+R
Sbjct: 210 TVKDLAER 217




247|Sequence|1231|1240|DLAQRSFRVS

>sp|SPSS2_ARCFU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DLAQRSFRVS 10
+ A+R FRVS
Sbjct: 229 EFAERVFRVS 238


>sp|Y987_METTH|UNCHARACTERIZED protein MTH_987|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 DLAQRSFR 8
DL+ RSFR
Sbjct: 319 DLSTRSFR 326




248|Sequence|1236|1245|SFRVSINIDL

>sp|COFC_NATPD|2-PHOSPHO-L-LACTATE guanylyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SFRVSINID 9
SFR++++ID
Sbjct: 153 SFRLAVDID 161


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SFRVSINID 9
S+R S+NID
Sbjct: 169 SYRDSLNID 177


>sp|COFC_METMJ|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 SFRVSINID 9
SFR+S +ID
Sbjct: 160 SFRMSTDID 168


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 SFRVSINIDL 10
+FR S++IDL
Sbjct: 432 TFRRSLHIDL 441




249|Sequence|1241|1250|INIDLKAPVI

>sp|QUEC_METS3|7-CYANO-7-DEAZAGUANINE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 NIDLKAPVI 10
NI++KAP I
Sbjct: 161 NIEIKAPAI 169


>sp|TRM56_AERPE|TRNA (cytidine(56)-2'-O)-methyltransferase|Aeropyrum pernix (strain ATCC

Query: 1 INIDLKAPVI 10
+N+D APVI
Sbjct: 96 VNVDDVAPVI 105


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 2 NIDLKAPV 9
N+D++AP+
Sbjct: 142 NVDIEAPI 149


>sp|Y1533_SACS2|PUTATIVE dioxygenase SSO1533|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 NIDLKAPVI 10
N DLK PV+
Sbjct: 195 NRDLKLPVL 203


>sp|RS17_METVA|SMALL ribosomal subunit protein uS17|Methanococcus vannielii

Query: 1 INIDLKAP 8
I ID+KAP
Sbjct: 4 IGIDVKAP 11


>sp|RS17_METMP|SMALL ribosomal subunit protein uS17|Methanococcus maripaludis (strain

Query: 1 INIDLKAP 8
I ID+KAP
Sbjct: 4 IGIDVKAP 11


>sp|QUEC_METST|7-CYANO-7-DEAZAGUANINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 NIDLKAPVI 10
+I++KAP+I
Sbjct: 160 DIEIKAPLI 168




250|Sequence|1246|1255|KAPVIVIPQS

>sp|G1PDH_PYRAR|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 KAPVIVIPQS 10
+AP+IVIP S
Sbjct: 98 RAPLIVIPTS 107


>sp|MFNA_METAC|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina acetivorans

Query: 2 APVIVIPQS 10
AP IVIP+S
Sbjct: 126 APNIVIPES 134


>sp|THS_METJA|THERMOSOME subunit|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 APVIVIPQS 10
AP++V+PQ+
Sbjct: 6 APIVVLPQN 14


>sp|G1PDH_PYRNV|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 KAPVIVIPQS 10
K P+IV+P S
Sbjct: 98 KRPLIVVPTS 107


>sp|RF1_AERPE|PEPTIDE chain release factor subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 APVIVIPQS 10
A VIV+P+S
Sbjct: 340 AQVIVVPES 348


>sp|Y1552_ARCFU|UNCHARACTERIZED transporter AF_1552|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 APVIVIPQS 10
APV VIP S
Sbjct: 98 APVYVIPLS 106


>sp|ACDD_METJA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanocaldococcus

Query: 2 APVIVIPQS 10
AP IVIPQ+
Sbjct: 45 APPIVIPQT 53


>sp|MFNA_METMJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoculleus marisnigri

Query: 1 KAPVIVIPQS 10
K+P +V+P S
Sbjct: 107 KSPNVVVPAS 116


>sp|CYAS_METPE|CYSTEATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 VIVIPQS 10
VIV+PQS
Sbjct: 149 VIVVPQS 155


>sp|G1PDH_PYRIL|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum islandicum (strain DSM 4184

Query: 1 KAPVIVIPQS 10
K P++++P S
Sbjct: 98 KKPLVIVPTS 107




251|Sequence|1251|1260|VIPQSSISTN

***** No hits found ******


252|Sequence|1256|1265|SISTNAVVVD

>sp|CH60_METHJ|CHAPERONIN GroEL|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 ISTNAVVVD 10
+ST AVVVD
Sbjct: 514 LSTEAVVVD 522


>sp|FWDA_METJA|PROTEIN FwdA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SISTNAVVVD 10
S+S NA V+D
Sbjct: 34 SVSDNAKVID 43




253|Sequence|1261|1270|AVVVDLGLIR

>sp|CARA_METMA|CARBAMOYL phosphate synthase small chain|Methanosarcina mazei (strain ATCC

Query: 1 AVVVDLGLIR 10
AVVVDLG+ R
Sbjct: 183 AVVVDLGIKR 192


>sp|CARA_METAC|CARBAMOYL phosphate synthase small chain|Methanosarcina acetivorans (strain

Query: 1 AVVVDLGLIR 10
AVVVDLG+ R
Sbjct: 183 AVVVDLGIKR 192


>sp|SYS_THEON|SERINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 VVVDLGLIR 10
V++DL LIR
Sbjct: 193 VILDLALIR 201


>sp|SYS_THEKO|SERINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VVVDLGLIR 10
V++DL LIR
Sbjct: 193 VILDLALIR 201


>sp|SYS_THEGJ|SERINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 VVVDLGLIR 10
V++DL LIR
Sbjct: 193 VILDLALIR 201


>sp|SYS_PYRHO|SERINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VVVDLGLIR 10
V++DL LIR
Sbjct: 193 VILDLALIR 201


>sp|SYS_PYRFU|SERINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VVVDLGLIR 10
V++DL LIR
Sbjct: 193 VILDLALIR 201


>sp|SYS_PYRAB|SERINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 VVVDLGLIR 10
V++DL LIR
Sbjct: 193 VILDLALIR 201


>sp|SYS_THESM|SERINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 VVVDLGLIR 10
V++DL LIR
Sbjct: 193 VILDLSLIR 201


>sp|Y1129_METJA|UNCHARACTERIZED protein MJ1129|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VVDLGLIR 10
+VD+GLIR
Sbjct: 23 IVDMGLIR 30


>sp|GUAAB_THEAC|GMP synthase [glutamine-hydrolyzing] subunit B|Thermoplasma

Query: 2 VVVDLGLIR 10
V VD GLIR
Sbjct: 50 VFVDTGLIR 58


>sp|G1PDH_CENSY|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Cenarchaeum symbiosum (strain A)

Query: 1 AVVVDLGLIR 10
V VD+G+IR
Sbjct: 154 GVFVDIGVIR 163




254|Sequence|1266|1275|LGLIRVHNQF

>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GLIRVHNQF 10
G +RV NQF
Sbjct: 223 GEVRVRNQF 231


>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GLIRVHNQ 9
G+IRV+NQ
Sbjct: 534 GVIRVNNQ 541


>sp|TRUD_METTH|PROBABLE tRNA pseudouridine synthase D|Methanothermobacter

Query: 2 GLIRVHNQ 9
G IRVHN+
Sbjct: 16 GRIRVHNR 23


>sp|UPP_HALSA|URACIL phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 GLIRVHNQF 10
GL+RV +QF
Sbjct: 184 GLLRVGDQF 192


>sp|UPP_HALS3|URACIL phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 GLIRVHNQF 10
GL+RV +QF
Sbjct: 184 GLLRVGDQF 192


>sp|XPD_SULAC|ATP-DEPENDENT DNA helicase XPD|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LGLIRVHNQF 10
L ++R HN+F
Sbjct: 51 LFVVRTHNEF 60


>sp|DGGGP_SULAC|DIGERANYLGERANYLGLYCERYL phosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LGLIRVHN 8
L LIRVHN
Sbjct: 7 LELIRVHN 14


>sp|DGGGP_METS5|DIGERANYLGERANYLGLYCERYL phosphate synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 LGLIRVHN 8
L L+R+HN
Sbjct: 5 LKLVRIHN 12


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LGLIRVH 7
+GLI+VH
Sbjct: 718 IGLIKVH 724




255|Sequence|1271|1280|VHNQFSLVSD

>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 HNQFSLVSD 10
H QFS++ D
Sbjct: 292 HQQFSMLKD 300


>sp|Y1762_ARCFU|UNCHARACTERIZED protein AF_1762|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VHNQFSLVS 9
VHN FS+ +
Sbjct: 22 VHNMFSMAT 30




256|Sequence|1276|1285|SLVSDEDYLN

>sp|CBID_SULAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 VSDEDYL 9
VSDEDY+
Sbjct: 182 VSDEDYI 188


>sp|CBID_SACI6|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 VSDEDYL 9
VSD+DYL
Sbjct: 177 VSDDDYL 183


>sp|CBID_SACI4|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 VSDEDYL 9
VSD+DYL
Sbjct: 177 VSDDDYL 183


>sp|CBID_SACI3|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 3 VSDEDYL 9
VSD+DYL
Sbjct: 177 VSDDDYL 183


>sp|CBID_SACI7|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 VSDEDYL 9
VSD+DYL
Sbjct: 177 VSDDDYL 183


>sp|CBID_SACS2|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 3 VSDEDYL 9
VSD+DYL
Sbjct: 177 VSDDDYL 183


>sp|CBID_SACI2|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 VSDEDYL 9
VSD+DYL
Sbjct: 177 VSDDDYL 183


>sp|CBID_SACI1|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 VSDEDYL 9
VSD+DYL
Sbjct: 177 VSDDDYL 183


>sp|GATB_SULTO|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfurisphaera tokodaii (strain DSM

Query: 3 VSDEDYL 9
+ DEDYL
Sbjct: 411 IKDEDYL 417


>sp|GCSH_KORCO|PROBABLE glycine cleavage system H|Korarchaeum cryptofilum (strain OPF8)

Query: 2 LVSDEDYL 9
L+S EDYL
Sbjct: 126 LMSSEDYL 133


>sp|GATB_SULAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfolobus acidocaldarius (strain ATCC

Query: 3 VSDEDYL 9
+ DEDYL
Sbjct: 411 IKDEDYL 417




257|Sequence|1281|1290|EDYLNPPVID

>sp|FEN_NANEQ|FLAP endonuclease 1|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 EDYLNPPVID 10
E +LNPPVID
Sbjct: 277 EFFLNPPVID 286


>sp|FEN_PYRCJ|FLAP endonuclease 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EDYLNPPVID 10
E +LNPPV D
Sbjct: 285 EFFLNPPVTD 294


>sp|FEN_THEGJ|FLAP endonuclease 1|Thermococcus gammatolerans (strain DSM 15229

Query: 1 EDYLNPPVID 10
E +LNPPV D
Sbjct: 277 EFFLNPPVTD 286


>sp|FEN_METMJ|FLAP endonuclease 1|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 YLNPPVID 10
+LNPPV D
Sbjct: 277 FLNPPVTD 284


>sp|FEN_PYRFU|FLAP endonuclease 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EDYLNPPVID 10
E +LNPPV D
Sbjct: 277 EFFLNPPVTD 286


>sp|FEN_THEON|FLAP endonuclease 1|Thermococcus onnurineus (strain NA1)

Query: 1 EDYLNPPVID 10
E +LNPPV D
Sbjct: 277 EFFLNPPVTD 286


>sp|FEN_THEKO|FLAP endonuclease 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EDYLNPPVID 10
E +LNPPV D
Sbjct: 277 EFFLNPPVTD 286


>sp|WTPA_THEKO|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EDYLNPPV 8
+D+LNPPV
Sbjct: 324 QDFLNPPV 331


>sp|FEN_AERPE|FLAP endonuclease 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 EDYLNPPVID 10
E +LNPPV D
Sbjct: 285 EYFLNPPVTD 294


>sp|FEN_PYRAE|FLAP endonuclease 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 YLNPPVID 10
+LNPPV D
Sbjct: 287 FLNPPVTD 294


>sp|SRP54_ARCFU|SIGNAL recognition particle 54 kDa|Archaeoglobus fulgidus (strain ATCC

Query: 1 EDYLNPPVID 10
E+ LNP +ID
Sbjct: 374 EELLNPKIID 383


>sp|FEN_ARCFU|FLAP endonuclease 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YLNPPVID 10
+LNPPV D
Sbjct: 279 FLNPPVTD 286


>sp|SEPS_METVS|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EDYLNPPVID 10
E+Y+NP ++D
Sbjct: 65 EEYINPVIVD 74


>sp|FEN_PYRIL|FLAP endonuclease 1|Pyrobaculum islandicum (strain DSM 4184

Query: 3 YLNPPVID 10
+LNPPV D
Sbjct: 287 FLNPPVTD 294


>sp|FEN_METHJ|FLAP endonuclease 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 YLNPPVID 10
+LNPPV D
Sbjct: 277 FLNPPVTD 284


>sp|SEPS_METM5|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C5 /

Query: 1 EDYLNPPVID 10
E+Y+NP ++D
Sbjct: 65 EEYINPVIVD 74


>sp|SEPS_METMP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EDYLNPPVID 10
E+Y+NP ++D
Sbjct: 65 EEYINPVIVD 74


>sp|SEPS_METM7|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C7 /

Query: 1 EDYLNPPVID 10
E+Y+NP ++D
Sbjct: 65 EEYINPVIVD 74


>sp|SEPS_METM6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C6 /

Query: 1 EDYLNPPVID 10
E+Y+NP ++D
Sbjct: 65 EEYINPVIVD 74


>sp|SEPS_META3|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EDYLNPPVID 10
E+Y+NP ++D
Sbjct: 65 EEYINPVIVD 74


>sp|FEN_KORCO|FLAP endonuclease 1|Korarchaeum cryptofilum (strain OPF8)

Query: 1 EDYLNPPVID 10
E +LNPP D
Sbjct: 281 EFFLNPPTTD 290


>sp|FEN_METBU|FLAP endonuclease 1|Methanococcoides burtonii (strain DSM 6242

Query: 3 YLNPPVID 10
++NPPV D
Sbjct: 280 FMNPPVTD 287


>sp|FEN_PYRNV|FLAP endonuclease 1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 YLNPPVID 10
+LNPPV +
Sbjct: 287 FLNPPVTE 294


>sp|FEN_PYRAB|FLAP endonuclease 1|Pyrococcus abyssi (strain GE5 /

Query: 1 EDYLNPPVID 10
E +LNPP D
Sbjct: 277 EFFLNPPTTD 286


>sp|WTPA_PYRAB|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus abyssi (strain GE5 /

Query: 1 EDYLNPPV 8
+D+L PPV
Sbjct: 320 QDFLTPPV 327


>sp|FEN_PYRHO|FLAP endonuclease 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EDYLNPPVID 10
E +LNPPV +
Sbjct: 277 EFFLNPPVTN 286


>sp|SECD_THEGJ|PROTEIN-EXPORT membrane protein SecD|Thermococcus gammatolerans (strain DSM 15229

Query: 3 YLNPPV 8
YL+PPV
Sbjct: 181 YLDPPV 186


>sp|FEN_HYPBU|FLAP endonuclease 1|Hyperthermus butylicus (strain DSM 5456

Query: 1 EDYLNPPV 8
E +LNPPV
Sbjct: 284 EYFLNPPV 291


>sp|FSX1_HALSH|FUSEXIN 1|Haloplanus natans (strain DSM 17983

Query: 5 NPPVID 10
NPP++D
Sbjct: 235 NPPLVD 240


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 1 EDYLNPP 7
EDY PP
Sbjct: 870 EDYYEPP 876


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 EDYLNPP 7
EDY PP
Sbjct: 870 EDYYEPP 876


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 EDYLNPP 7
EDY PP
Sbjct: 870 EDYYEPP 876


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 EDYLNPP 7
EDY PP
Sbjct: 870 EDYYEPP 876


>sp|FEN_CALMQ|FLAP endonuclease 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 EDYLNPPV 8
E +LNPPV
Sbjct: 287 EFFLNPPV 294


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 EDYLNPP 7
EDY PP
Sbjct: 870 EDYYEPP 876


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 EDYLNPP 7
EDY PP
Sbjct: 870 EDYYEPP 876


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 EDYLNPP 7
EDY PP
Sbjct: 870 EDYYEPP 876


>sp|FEN_THEAC|FLAP endonuclease 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 YLNPPVID 10
+ NPPV+D
Sbjct: 278 FKNPPVVD 285


>sp|AATI_METTH|A-TYPE ATP synthase subunit I|Methanothermobacter thermautotrophicus

Query: 2 DYLNPPVID 10
+++NPP+ +
Sbjct: 96 EFINPPIFE 104


>sp|FEN_STAMF|FLAP endonuclease 1|Staphylothermus marinus (strain ATCC 43588

Query: 1 EDYLNPPV 8
E +LNPPV
Sbjct: 285 EYFLNPPV 292


>sp|FEN_THEVO|FLAP endonuclease 1|Thermoplasma volcanium (strain ATCC 51530

Query: 3 YLNPPVID 10
+ NPPV+D
Sbjct: 278 FKNPPVVD 285


>sp|Y964_METJA|UNCHARACTERIZED protein MJ0964|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDYLNPPVI 9
+++LNPP I
Sbjct: 75 QEHLNPPKI 83


>sp|SPEE_KORCO|POLYAMINE aminopropyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 DYLNPPVID 10
DYL PP +D
Sbjct: 256 DYLVPPELD 264


>sp|TRPB_PYRIL|TRYPTOPHAN synthase beta chain|Pyrobaculum islandicum (strain DSM 4184

Query: 2 DYLNPPV 8
DY+ PPV
Sbjct: 312 DYVPPPV 318


>sp|WTPA_PYRFU|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EDYLNPPV 8
+D+L PP+
Sbjct: 321 QDFLEPPI 328


>sp|TRPB_PYRAR|TRYPTOPHAN synthase beta chain|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 DYLNPPV 8
DY+ PPV
Sbjct: 312 DYVPPPV 318


>sp|TRPB1_SACS2|TRYPTOPHAN synthase beta chain 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EDYLNPPV 8
+DY+ PP+
Sbjct: 317 KDYVPPPI 324


>sp|Y1385_PYRHO|IRON-SULFUR cluster assembly SufBD family|Pyrococcus horikoshii (strain ATCC

Query: 4 LNPPVID 10
LN PVID
Sbjct: 47 LNDPVID 53


>sp|TRPB1_SULTO|TRYPTOPHAN synthase beta chain 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EDYLNPPV 8
+DY+ PP+
Sbjct: 316 KDYVPPPI 323


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DYLNPP 7
DYL+PP
Sbjct: 383 DYLHPP 388


>sp|RS6E_PYRAE|SMALL ribosomal subunit protein eS6|Pyrobaculum aerophilum (strain ATCC

Query: 1 EDYLNPPVI 9
+DY PP I
Sbjct: 121 KDYTGPPAI 129




258|Sequence|1286|1295|PPVIDRMDVQ

>sp|QUEC_SULAC|7-CYANO-7-DEAZAGUANINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PPVIDR 6
PPV+DR
Sbjct: 136 PPVLDR 141


>sp|PMDHS_METJA|PHOSPHOMEVALONATE dehydratase small subunit|Methanocaldococcus jannaschii (strain

Query: 2 PVIDRMDVQ 10
P++D++D++
Sbjct: 99 PLVDKIDIE 107


>sp|GRPE_THEVO|PROTEIN GrpE|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PVIDRMD 8
PVID MD
Sbjct: 89 PVIDSMD 95


>sp|THSB_SULAC|CHAPERONIN subunit beta|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 VIDRMDVQ 10
++D+MD+Q
Sbjct: 75 ILDKMDLQ 82


>sp|THSB_SACS2|CHAPERONIN subunit beta|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 VIDRMDVQ 10
++D+MD+Q
Sbjct: 74 ILDKMDLQ 81


>sp|AROC_METMA|CHORISMATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PVIDRMD 8
PV DR+D
Sbjct: 224 PVFDRLD 230


>sp|AROC_METBF|CHORISMATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PVIDRMD 8
PV DR+D
Sbjct: 224 PVFDRLD 230


>sp|THSB_SACSH|CHAPERONIN subunit beta|Saccharolobus shibatae (strain ATCC 51178

Query: 3 VIDRMDVQ 10
++D+MD+Q
Sbjct: 74 ILDKMDLQ 81


>sp|AROC_METAC|CHORISMATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PVIDRMD 8
PV DR+D
Sbjct: 224 PVFDRLD 230


>sp|IF2B_NATPD|TRANSLATION initiation factor 2 subunit|Natronomonas pharaonis (strain ATCC

Query: 2 PVIDRMD 8
P IDR+D
Sbjct: 45 PTIDRLD 51


>sp|THSB_SULTO|CHAPERONIN subunit beta|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 VIDRMDVQ 10
++D+MD+Q
Sbjct: 75 ILDKMDLQ 82


>sp|RACD_PYRHO|ASPARTATE racemase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PVIDRMDV 9
P+ID MDV
Sbjct: 209 PLIDPMDV 216




259|Sequence|1291|1300|RMDVQLTKLT

>sp|RS3_METS3|SMALL ribosomal subunit protein uS3|Methanobrevibacter smithii (strain

Query: 2 MDVQLTKL 9
MDVQ+T L
Sbjct: 32 MDVQITPL 39




260|Sequence|1296|1305|LTKLTLYRTV

>sp|ENDA_NATPD|TRNA-SPLICING endonuclease|Natronomonas pharaonis (strain ATCC 35678

Query: 3 KLTLYRTV 10
+LT+YRT+
Sbjct: 244 RLTVYRTL 251


>sp|AROD_THEKO|3-DEHYDROQUINATE dehydratase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 TKLTLYRTV 10
T+L+LYR V
Sbjct: 68 TRLSLYRRV 76




261|Sequence|1301|1310|LYRTVIQPGI

>sp|PURL_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina barkeri (strain Fusaro /

Query: 3 RTVIQPG 9
RTVI+PG
Sbjct: 414 RTVIKPG 420


>sp|RPO1C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus vannielii (strain ATCC

Query: 3 RTVIQPG 9
RTVI+PG
Sbjct: 51 RTVIEPG 57


>sp|PURL_THESM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus sibiricus (strain DSM 12597

Query: 3 RTVIQPGI 10
RTV++PG+
Sbjct: 409 RTVLKPGL 416


>sp|PURL_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RTVIQPG 9
RTVI+PG
Sbjct: 409 RTVIKPG 415


>sp|HIS8_METMJ|HISTIDINOL-PHOSPHATE aminotransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 RTVIQPG 9
RTV++PG
Sbjct: 99 RTVVEPG 105


>sp|PURL_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 RTVIQPG 9
RTV++PG
Sbjct: 412 RTVVKPG 418


>sp|PURL_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanocaldococcus jannaschii (strain ATCC

Query: 3 RTVIQPG 9
RTV++PG
Sbjct: 418 RTVVKPG 424


>sp|PURL_CALMQ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 RTVIQPG 9
RTVI+PG
Sbjct: 409 RTVIKPG 415


>sp|PELO_HYPBU|PROTEIN pelota homolog|Hyperthermus butylicus (strain DSM 5456

Query: 1 LYRTVIQPG 9
L TVIQPG
Sbjct: 25 LLSTVIQPG 33


>sp|PURL_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 RTVIQPG 9
RTV++PG
Sbjct: 413 RTVVKPG 419


>sp|PURL_IGNH4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 RTVIQPG 9
RTV++PG
Sbjct: 409 RTVVKPG 415


>sp|PURL_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 RTVIQPG 9
RTV++PG
Sbjct: 413 RTVVKPG 419


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 3 RTVIQPG 9
RTV++PG
Sbjct: 412 RTVVKPG 418


>sp|PURL_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus kodakarensis (strain ATCC

Query: 3 RTVIQPG 9
RTV++PG
Sbjct: 409 RTVVKPG 415


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 3 RTVIQPG 9
RTV++PG
Sbjct: 412 RTVVKPG 418


>sp|PURL_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus abyssi (strain GE5 /

Query: 3 RTVIQPG 9
RTV++PG
Sbjct: 409 RTVVKPG 415


>sp|PURL_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 RTVIQPG 9
RT+++PG
Sbjct: 412 RTIVKPG 418


>sp|PURL_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RTVIQPG 9
RTV++PG
Sbjct: 409 RTVVKPG 415


>sp|PURL_PYRCJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 RTVIQPG 9
RTV++PG
Sbjct: 405 RTVVKPG 411


>sp|TRKA_PYRAB|TRK system potassium uptake protein|Pyrococcus abyssi (strain GE5 /

Query: 1 LYRTVIQPG 9
++RT++ PG
Sbjct: 132 IFRTLVTPG 140


>sp|PURL_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanopyrus kandleri (strain AV19 /

Query: 3 RTVIQPG 9
RTV++PG
Sbjct: 414 RTVVKPG 420


>sp|HIS8_METLZ|HISTIDINOL-PHOSPHATE aminotransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 RTVIQPG 9
RT+++PG
Sbjct: 99 RTIVEPG 105


>sp|TRKA_PYRHO|TRK system potassium uptake protein|Pyrococcus horikoshii (strain ATCC

Query: 1 LYRTVIQPG 9
++RT++ PG
Sbjct: 132 IFRTLVTPG 140


>sp|PURL_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus gammatolerans (strain DSM 15229

Query: 3 RTVIQPG 9
RTV++PG
Sbjct: 408 RTVLKPG 414


>sp|SYG_METTP|GLYCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LYRTVIQPG 9
++RT I PG
Sbjct: 143 MFRTAIGPG 151


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 RTVIQPG 9
RTV++PG
Sbjct: 407 RTVLKPG 413


>sp|IF2P_METMA|PROBABLE translation initiation factor IF-2|Methanosarcina mazei (strain

Query: 1 LYRTVIQPG 9
++ T+I+PG
Sbjct: 457 IFETIIRPG 465


>sp|IF2P_METAC|PROBABLE translation initiation factor IF-2|Methanosarcina acetivorans

Query: 1 LYRTVIQPG 9
++ T+I+PG
Sbjct: 463 IFETIIRPG 471


>sp|IF2P_METBF|PROBABLE translation initiation factor IF-2|Methanosarcina barkeri (strain

Query: 1 LYRTVIQPG 9
++ T+I+PG
Sbjct: 457 IFETIIRPG 465


>sp|RS2_METJA|SMALL ribosomal subunit protein uS2|Methanocaldococcus jannaschii (strain

Query: 2 YRTVIQP 8
YR +IQP
Sbjct: 205 YRIIIQP 211




262|Sequence|1306|1315|IQPGIYHPDI

>sp|PUR1_ARCFU|AMIDOPHOSPHORIBOSYLTRANSFERASE fulgidus (strain ATCC 49558

Query: 4 GIYHPD 9
GIYHPD
Sbjct: 6 GIYHPD 11


>sp|PEPQ_PYRHO|XAA-PRO dipeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IQPGIYHPDI 10
I+PGIY P I
Sbjct: 315 IEPGIYIPKI 324


>sp|RS3_METAC|SMALL ribosomal subunit protein uS3|Methanosarcina acetivorans (strain

Query: 1 IQPGIYHPD 9
IQPG+ PD
Sbjct: 183 IQPGVVLPD 191


>sp|PEPQ_PYRFU|XAA-PRO dipeptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IQPGIYHPDI 10
I+PGIY P +
Sbjct: 312 IEPGIYIPKL 321


>sp|RS3_METMA|SMALL ribosomal subunit protein uS3|Methanosarcina mazei (strain ATCC

Query: 1 IQPGIYHPD 9
IQPG+ PD
Sbjct: 183 IQPGVVLPD 191


>sp|PCKA_AERPE|PHOSPHOENOLPYRUVATE carboxykinase (ATP)|Aeropyrum pernix (strain ATCC 700893

Query: 1 IQPGIYHPD 9
++P + HPD
Sbjct: 266 LEPAVLHPD 274


>sp|PRPB_AERPE|2-METHYLISOCITRATE lyase|Aeropyrum pernix (strain ATCC 700893

Query: 1 IQPGIYHPDI 10
+ PG+Y+P +
Sbjct: 27 VAPGVYNPAV 36


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 4 GIYHPDI 10
G YHP+I
Sbjct: 1438 GFYHPEI 1444


Query: 5 IYHPDI 10
I+HPDI
Sbjct: 810 IWHPDI 815


>sp|RS3_METBF|SMALL ribosomal subunit protein uS3|Methanosarcina barkeri (strain Fusaro

Query: 1 IQPGIYHPD 9
IQPG+ PD
Sbjct: 183 IQPGVVLPD 191


>sp|GATE_PYRFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PGIYHPD 9
PGI+H D
Sbjct: 342 PGIFHSD 348


>sp|HPCAS_SULTO|3-HYDROXYPROPIONYL-COENZYME A synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PGIYHP 8
PGIY+P
Sbjct: 501 PGIYYP 506


>sp|Y1051_ARCFU|UNCHARACTERIZED protein AF_1051|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IQPGIYHP 8
I PGI+ P
Sbjct: 119 INPGIFDP 126


>sp|IF2B_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 4 GIYHPDI 10
G+YHP +
Sbjct: 83 GVYHPKL 89


>sp|PORC_PYRHO|PYRUVATE/KETOISOVALERATE oxidoreductases common subunit gamma|Pyrococcus horikoshii

Query: 1 IQPGIYHPDI 10
I+ IY PDI
Sbjct: 60 IKTQIYEPDI 69


>sp|DNAJ_NATPD|CHAPERONE protein DnaJ|Natronomonas pharaonis (strain ATCC 35678

Query: 6 YHPDI 10
YHPD+
Sbjct: 31 YHPDV 35


>sp|DNAJ_HALMT|CHAPERONE protein DnaJ|Haloferax mediterranei (strain ATCC 33500

Query: 6 YHPDI 10
YHPD+
Sbjct: 31 YHPDV 35


>sp|APGM_METLZ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanocorpusculum labreanum (strain ATCC

Query: 1 IQPGIYHPD 9
+QP HPD
Sbjct: 174 VQPKTIHPD 182


>sp|CHEB2_METAC|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 2|Methanosarcina

Query: 1 IQPGIYHPDI 10
I PG YH +I
Sbjct: 237 IAPGNYHMEI 246


>sp|ENO_THEON|ENOLASE onnurineus (strain NA1)

Query: 6 YHPDI 10
YHPDI
Sbjct: 252 YHPDI 256


>sp|GATE_PYRAB|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus abyssi (strain GE5 /

Query: 3 PGIYHPD 9
PGI+H D
Sbjct: 346 PGIFHID 352


>sp|GATB_METM6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C6 /

Query: 3 PGIYHPDI 10
PG Y PD+
Sbjct: 123 PGQYKPDL 130


>sp|GATB_METM5|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C5 /

Query: 3 PGIYHPDI 10
PG Y PD+
Sbjct: 123 PGQYKPDL 130


>sp|GATB_METMP|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain DSM

Query: 3 PGIYHPDI 10
PG Y PD+
Sbjct: 123 PGQYKPDL 130


>sp|GATB_METM7|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C7 /

Query: 3 PGIYHPDI 10
PG Y PD+
Sbjct: 123 PGQYKPDL 130


>sp|GATB_META3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus aeolicus (strain ATCC

Query: 3 PGIYHPDI 10
PG Y PD+
Sbjct: 123 PGQYKPDL 130


>sp|GATE_PYRHO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus horikoshii (strain ATCC

Query: 3 PGIYHPD 9
PGI+H D
Sbjct: 346 PGIFHID 352


>sp|DHE3_THELN|GLUTAMATE dehydrogenase|Thermococcus litoralis (strain ATCC 51850

Query: 4 GIYHPD 9
GIY+PD
Sbjct: 248 GIYNPD 253


>sp|DNAJ_HALSA|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 700922

Query: 6 YHPDI 10
YHPD+
Sbjct: 31 YHPDV 35


>sp|DNAJ_HALS3|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 29341

Query: 6 YHPDI 10
YHPD+
Sbjct: 31 YHPDV 35


>sp|GATB_METVS|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus vannielii (strain ATCC

Query: 3 PGIYHPDI 10
PG Y PD+
Sbjct: 123 PGQYKPDL 130


>sp|DHE3_THEPR|GLUTAMATE dehydrogenase|Thermococcus profundus

Query: 4 GIYHPD 9
GIY+PD
Sbjct: 248 GIYNPD 253


>sp|CDC61_AERPE|ORC1-TYPE DNA replication protein 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 PGIYHPDI 10
PG+ PD+
Sbjct: 228 PGVLDPDV 235


>sp|DHE3_PYRAB|GLUTAMATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 4 GIYHPD 9
GIY+PD
Sbjct: 249 GIYNPD 254


>sp|Y806_METJA|UNCHARACTERIZED peptidase MJ0806|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IQPGIYHPD 9
I+PG+Y D
Sbjct: 311 IEPGLYLKD 319


>sp|DNAJ_HALMA|CHAPERONE protein DnaJ|Haloarcula marismortui (strain ATCC 43049

Query: 6 YHPDI 10
YHPD+
Sbjct: 31 YHPDV 35


>sp|DHE3_PYRHR|GLUTAMATE dehydrogenase|Pyrococcus horikoshii

Query: 4 GIYHPD 9
GIY+PD
Sbjct: 249 GIYNPD 254


>sp|DHE3_PYRHO|GLUTAMATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GIYHPD 9
GIY+PD
Sbjct: 249 GIYNPD 254


>sp|DHE3_PYREN|GLUTAMATE dehydrogenase|Pyrococcus endeavori

Query: 4 GIYHPD 9
GIY+PD
Sbjct: 249 GIYNPD 254


>sp|CHEB2_METMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 2|Methanosarcina mazei

Query: 1 IQPGIYHPDI 10
I PG YH +I
Sbjct: 248 IAPGDYHMEI 257


>sp|Y1154_METLZ|UPF0173 metal-dependent hydrolase Mlab_1154|Methanocorpusculum labreanum

Query: 5 IYHPDI 10
+YHPDI
Sbjct: 144 LYHPDI 149


>sp|CHEB_METBU|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Methanococcoides

Query: 1 IQPGIYHPDI 10
I PG YH +I
Sbjct: 230 IAPGGYHMEI 239


>sp|DHE3_PYRFU|GLUTAMATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GIYHPD 9
GIY+PD
Sbjct: 249 GIYNPD 254


>sp|DHE3_THEKO|GLUTAMATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 GIYHPD 9
GIY+PD
Sbjct: 249 GIYNPD 254


>sp|DHE2_HALSI|NAD-SPECIFIC glutamate dehydrogenase A|Halobacterium salinarum (Halobacterium

Query: 6 YHPDI 10
YHPD+
Sbjct: 95 YHPDV 99


>sp|GFCR_METHJ|TRANSCRIPTIONAL regulator GfcR|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 IQPGIYHP 8
++ GIYHP
Sbjct: 109 VRIGIYHP 116


>sp|DNAJ_HALWD|CHAPERONE protein DnaJ|Haloquadratum walsbyi (strain DSM 16790

Query: 6 YHPDI 10
YHPD+
Sbjct: 31 YHPDV 35


>sp|Y1178_METJA|UNCHARACTERIZED glycosyltransferase MJ1178|Methanocaldococcus jannaschii (strain

Query: 1 IQPGIYHPDI 10
+ P IY+P I
Sbjct: 7 LMPSIYYPYI 16


>sp|SYFA_THEON|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus onnurineus (strain NA1)

Query: 1 IQPGIYHPDI 10
+Q YHP++
Sbjct: 428 VQMSAYHPEL 437


>sp|SYFA_THEKO|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IQPGIYHPDI 10
+Q YHP++
Sbjct: 429 VQMSAYHPEL 438


>sp|SYFA_THEGJ|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 1 IQPGIYHPDI 10
+Q YHP++
Sbjct: 427 VQMSAYHPEL 436


>sp|NPD_HALMA|NAD-DEPENDENT protein deacetylase|Haloarcula marismortui (strain ATCC 43049

Query: 4 GIYHPDI 10
G+Y PD+
Sbjct: 170 GVYRPDV 176


>sp|DNAJ_METTH|CHAPERONE protein DnaJ|Methanothermobacter thermautotrophicus (strain ATCC

Query: 6 YHPDI 10
YHPD+
Sbjct: 32 YHPDV 36


>sp|DPHB_METM7|DIPHTHINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 IQPGIYHPDI 10
I+PG+Y+ I
Sbjct: 210 IKPGLYYGKI 219


>sp|SYFA_PYRHO|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IQPGIYHPDI 10
+Q YHP++
Sbjct: 427 VQLSAYHPEL 436


>sp|SYFA_PYRAB|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 IQPGIYHPDI 10
+Q YHP++
Sbjct: 428 VQLSAYHPEL 437


>sp|Y1063_METPE|UPF0173 metal-dependent hydrolase Mpal_1063|Methanosphaerula palustris

Query: 5 IYHPDI 10
+YHPD+
Sbjct: 144 LYHPDV 149


>sp|TRPD_HALWD|ANTHRANILATE phosphoribosyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 GIYHPDI 10
G+Y PD+
Sbjct: 193 GVYDPDL 199


>sp|TRPF_THEVO|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PGIYHP 8
PGI HP
Sbjct: 172 PGIKHP 177


>sp|Y1705_METHJ|UPF0173 metal-dependent hydrolase Mhun_1705|Methanospirillum hungatei JF-1

Query: 5 IYHPDI 10
+YHPD+
Sbjct: 143 LYHPDV 148


>sp|SYFA_PYRFU|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IQPGIYHPDI 10
+Q YHP++
Sbjct: 427 VQLSAYHPEL 436


>sp|Y816_METB6|UPF0173 metal-dependent hydrolase Mboo_0816|Methanoregula boonei (strain

Query: 5 IYHPDI 10
+YHPD+
Sbjct: 144 LYHPDV 149


>sp|TRPD_HALMA|ANTHRANILATE phosphoribosyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 4 GIYHPDI 10
G+Y PD+
Sbjct: 191 GVYDPDL 197


>sp|TRPD_HALLT|ANTHRANILATE phosphoribosyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 4 GIYHPDI 10
G+Y PD+
Sbjct: 193 GVYDPDL 199


>sp|SEPS_METKA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanopyrus kandleri (strain AV19 /

Query: 6 YHPDI 10
YHPD+
Sbjct: 293 YHPDL 297


>sp|TRPG_HALSA|ANTHRANILATE synthase component 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 IQPGIYHPD 9
I PG HPD
Sbjct: 54 ISPGPGHPD 62




263|Sequence|1311|1320|YHPDIQLLHP

>sp|FAEHP_METTH|BIFUNCTIONAL enzyme Fae/Hps|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 YHPDIQLLH 9
Y PDI LLH
Sbjct: 298 YKPDIVLLH 306


>sp|MPTA_ARCFU|GTP cyclohydrolase MptA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PDIQLLHP 10
PD+QLL P
Sbjct: 3 PDVQLLKP 10


>sp|KAE1B_METVS|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 YHPDIQLLHP 10
Y P IQ +HP
Sbjct: 38 YTPKIQGIHP 47


>sp|MPTA_METTP|GTP cyclohydrolase MptA|Methanothrix thermoacetophila (strain DSM

Query: 3 PDIQLLHP 10
PD+Q HP
Sbjct: 5 PDVQACHP 12


>sp|DPOL2_SACS2|DNA polymerase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 HPDIQLLHP 10
+PDI L HP
Sbjct: 113 NPDIVLQHP 121


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 1 YHPDIQLLHP 10
Y+P I LHP
Sbjct: 136 YYPPITYLHP 145


>sp|KAE1B_METMP|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 YHPDIQLLHP 10
Y P +Q +HP
Sbjct: 39 YTPPVQGIHP 48


>sp|KAE1B_METM7|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 YHPDIQLLHP 10
Y P +Q +HP
Sbjct: 38 YTPPVQGIHP 47


>sp|KAE1B_METM6|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 YHPDIQLLHP 10
Y P +Q +HP
Sbjct: 38 YTPPVQGIHP 47


>sp|KAE1B_METM5|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 YHPDIQLLHP 10
Y P +Q +HP
Sbjct: 38 YTPPVQGIHP 47


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 1 YHPDIQLLHP 10
Y+P I LHP
Sbjct: 134 YYPPITYLHP 143


>sp|KAE1B_HALWD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 YHPDIQLLHP 10
Y PD LHP
Sbjct: 32 YQPDSGGLHP 41


>sp|SUCC_DESA1|SUCCINATE--COA ligase [ADP-forming] subunit beta|Desulfurococcus amylolyticus

Query: 2 HPDIQLLH 9
HPD+Q L+
Sbjct: 219 HPDLQPLY 226


>sp|Y429_METAC|PUTATIVE nickel insertion protein|Methanosarcina acetivorans (strain ATCC

Query: 2 HPDIQLLH 9
PD+++LH
Sbjct: 108 QPDLEMLH 115


>sp|PYRB_METMA|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina mazei (strain

Query: 3 PDIQLLHP 10
P++++LHP
Sbjct: 260 PELKILHP 267


>sp|SYT_METPE|THREONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 YHPDIQLLHP 10
YH D +++HP
Sbjct: 445 YHLDGEVVHP 454


>sp|GCSPB_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 2 HPDIQLLHP 10
HP + +HP
Sbjct: 95 HPKVAFIHP 103


>sp|CAS3_METTH|CRISPR-ASSOCIATED nuclease/helicase Cas3|Methanothermobacter thermautotrophicus

Query: 3 PDIQLLH 9
PD+ LLH
Sbjct: 541 PDVYLLH 547


>sp|WECC_METVS|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 2 HPDIQLLHP 10
HP + +L+P
Sbjct: 245 HPRVNILNP 253


>sp|WECC_METMP|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 2 HPDIQLLHP 10
HP + +L+P
Sbjct: 245 HPRVNILNP 253


>sp|WECC_METM7|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 2 HPDIQLLHP 10
HP + +L+P
Sbjct: 245 HPRVNILNP 253


>sp|WECC_METM5|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 2 HPDIQLLHP 10
HP + +L+P
Sbjct: 245 HPRVNILNP 253


>sp|WECC_META3|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 HPDIQLLHP 10
HP + +L+P
Sbjct: 250 HPRVNILNP 258


>sp|Y081_METMA|UPF0210 protein MM_0081|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HPDIQLLH 9
HPDI++ +
Sbjct: 36 HPDIEIFN 43


>sp|ARLY_NATPD|ARGININOSUCCINATE lyase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 YHPDIQLLHP 10
Y+ D+Q HP
Sbjct: 316 YNRDLQRAHP 325


>sp|PYRB_METAC|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina acetivorans

Query: 3 PDIQLLHP 10
P++++LHP
Sbjct: 259 PELKVLHP 266


>sp|GCSPB_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 2 HPDIQLLHP 10
HP + +HP
Sbjct: 95 HPKVAYIHP 103


>sp|ATGT_METAC|TRNA-GUANINE(15) transglycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 HPDIQLLHP 10
+P+IQL+ P
Sbjct: 36 NPNIQLISP 44


>sp|GCSPB_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 2 HPDIQLLHP 10
HP + +HP
Sbjct: 95 HPKVAYIHP 103


>sp|ATGT_METMA|TRNA-GUANINE(15) transglycosylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HPDIQLLHP 10
+P+IQL+ P
Sbjct: 36 NPNIQLISP 44


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 HPDIQLLHP 10
HP + +HP
Sbjct: 95 HPGVAYIHP 103


>sp|PYRB_METBU|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcoides burtonii

Query: 3 PDIQLLHP 10
P+++++HP
Sbjct: 259 PELKVMHP 266


>sp|PYRB_METTP|ASPARTATE carbamoyltransferase catalytic subunit|Methanothrix

Query: 3 PDIQLLHP 10
P+++++HP
Sbjct: 257 PELRIMHP 264


>sp|GCSPB_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 HPDIQLLHP 10
HP + +HP
Sbjct: 95 HPGVAYVHP 103


>sp|GCSPB_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 HPDIQLLHP 10
HP + +HP
Sbjct: 95 HPGVAYVHP 103




264|Sequence|1316|1325|QLLHPINLEF

>sp|MOAC_SULTO|PROBABLE cyclic pyranopterin monophosphate synthase|Sulfurisphaera

Query: 2 LLHPINLEF 10
+ HPI LEF
Sbjct: 66 MCHPIPLEF 74


>sp|APGM_METS3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanobrevibacter smithii (strain ATCC

Query: 4 HPINLE 9
HP+NLE
Sbjct: 207 HPVNLE 212


>sp|APGM_METLZ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanocorpusculum labreanum (strain ATCC

Query: 4 HPINLE 9
HP+NLE
Sbjct: 209 HPVNLE 214


>sp|APGM_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LHPINLE 9
LHP+NL+
Sbjct: 196 LHPVNLK 202


>sp|APGM_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina acetivorans (strain ATCC

Query: 3 LHPINLE 9
LHP+NL+
Sbjct: 196 LHPVNLK 202


>sp|APGM_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina barkeri (strain Fusaro /

Query: 3 LHPINL 8
LHP+NL
Sbjct: 196 LHPVNL 201


>sp|RQCH_METJA|ARCHAEAL Rqc2 homolog aRqcH|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LHPINLEF 10
L+P NLEF
Sbjct: 164 LNPYNLEF 171


>sp|SYFB_METB6|PHENYLALANINE--TRNA ligase beta subunit|Methanoregula boonei (strain DSM 21154

Query: 1 QLLHPINLEF 10
+L+HPI+ E+
Sbjct: 400 RLMHPISEEY 409


>sp|HMDH_SACS2|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QLLHPINL 8
QL+H INL
Sbjct: 264 QLIHDINL 271


>sp|Y1641_METJA|UNCHARACTERIZED protein MJ1641|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LHPINLEF 10
LH INLEF
Sbjct: 68 LHKINLEF 75


>sp|SYFB_METMJ|PHENYLALANINE--TRNA ligase beta subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 QLLHPINLE 9
+LLHPI+ E
Sbjct: 400 RLLHPISEE 408


>sp|APGM_METST|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosphaera stadtmanae (strain ATCC

Query: 4 HPINLE 9
HP+N+E
Sbjct: 205 HPVNIE 210


>sp|RBL_ARCFU|RIBULOSE bisphosphate carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LHPINLE 9
LHP NLE
Sbjct: 367 LHPGNLE 373


>sp|KHSE_SULTO|HOMOSERINE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 PINLEF 10
P+NLEF
Sbjct: 159 PLNLEF 164


>sp|MOAC_SULAC|PROBABLE cyclic pyranopterin monophosphate synthase|Sulfolobus

Query: 2 LLHPINLEF 10
+ HPI LE+
Sbjct: 61 MCHPIPLEY 69


>sp|COABC_THEKO|COENZYME A biosynthesis bifunctional protein|Thermococcus kodakarensis

Query: 1 QLLHPINLEF 10
+++HP +EF
Sbjct: 58 KIIHPYAMEF 67


>sp|G3P_METBU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 3 LHPINLEF 10
LH INLE
Sbjct: 222 LHTINLEL 229


>sp|APGM_THEVO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 HPINLE 9
HP+N+E
Sbjct: 204 HPVNVE 209


>sp|AROC_METS3|CHORISMATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 LHPINLE 9
+HP NLE
Sbjct: 357 IHPSNLE 363




265|Sequence|1321|1330|INLEFLVNRN

>sp|MTHK_METTH|CALCIUM-GATED potassium channel MthK|Methanothermobacter thermautotrophicus

Query: 3 LEFLVNR 9
LEFL+NR
Sbjct: 95 LEFLINR 101


>sp|CMR5_SACS2|CRISPR system CMR subunit Cmr5|Saccharolobus solfataricus (strain ATCC

Query: 1 INLEFLVNR 9
IN EFL+N+
Sbjct: 107 INKEFLINK 115


>sp|TVOK_THEVO|CALCIUM-GATED potassium channel TvoK|Thermoplasma volcanium (strain ATCC 51530

Query: 3 LEFLVNRN 10
LEFL RN
Sbjct: 36 LEFLTQRN 43


>sp|Y1560_METJA|UNCHARACTERIZED MFS-type transporter MJ1560|Methanocaldococcus jannaschii (strain

Query: 2 NLEFLVNRN 10
+ EFL NRN
Sbjct: 203 SFEFLKNRN 211




266|Sequence|1326|1335|LVNRNLAASW

>sp|PROA_METMA|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LVNRNLA 7
LVNRN+A
Sbjct: 266 LVNRNIA 272


>sp|GATB_HALMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloarcula marismortui (strain ATCC

Query: 5 NLAASW 10
NLAA+W
Sbjct: 369 NLAATW 374




267|Sequence|1331|1340|LAASWYHKVP

>sp|AATA_SULAC|A-TYPE ATP synthase subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LAASWYHK 8
L ASW+HK
Sbjct: 442 LVASWWHK 449


>sp|TRM1_PYRAR|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum arsenaticum

Query: 1 LAASWYHKVP 10
+AA W+ KVP
Sbjct: 295 VAAPWFFKVP 304


>sp|AATA_SULTO|A-TYPE ATP synthase subunit A|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LAASWYHK 8
L A W+HK
Sbjct: 442 LVAQWWHK 449


>sp|KDGK1_HALVD|2-DEHYDRO-3-DEOXYGLUCONOKINASE/2-DEHYDRO-3-DEOXYGALACTONOKINASE volcanii (strain ATCC 29605

Query: 3 ASWYHKVP 10
A+W+ K+P
Sbjct: 50 AAWFSKLP 57


>sp|DHYS_IGNH4|PROBABLE deoxyhypusine synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LAASWYHKVP 10
L A+W KVP
Sbjct: 175 LRAAWERKVP 184


>sp|IPYR_THEAC|INORGANIC pyrophosphatase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 SWYHKVP 10
S+YH VP
Sbjct: 3 SFYHSVP 9


>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 4 SWYH 7
SWYH
Sbjct: 712 SWYH 715


>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 4 SWYH 7
SWYH
Sbjct: 712 SWYH 715


>sp|Y425_METJA|UNCHARACTERIZED protein MJ0425|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ASWYHK 8
A W+HK
Sbjct: 57 AKWWHK 62


>sp|RL4_THEON|LARGE ribosomal subunit protein uL4|Thermococcus onnurineus (strain

Query: 3 ASWYHKV 9
ASW H++
Sbjct: 37 ASWTHRI 43


>sp|RL4_THEKO|LARGE ribosomal subunit protein uL4|Thermococcus kodakarensis (strain

Query: 3 ASWYHKV 9
ASW H++
Sbjct: 37 ASWTHRI 43


>sp|RL4_THEGJ|LARGE ribosomal subunit protein uL4|Thermococcus gammatolerans (strain

Query: 3 ASWYHKV 9
ASW H++
Sbjct: 37 ASWTHRI 43


>sp|RL4_PYRAB|LARGE ribosomal subunit protein uL4|Pyrococcus abyssi (strain GE5 /

Query: 3 ASWYHKV 9
ASW H++
Sbjct: 37 ASWTHRI 43


>sp|RL4_THESM|LARGE ribosomal subunit protein uL4|Thermococcus sibiricus (strain DSM

Query: 3 ASWYHKV 9
ASW H++
Sbjct: 37 ASWTHRI 43


>sp|RL4_PYRHO|LARGE ribosomal subunit protein uL4|Pyrococcus horikoshii (strain ATCC

Query: 3 ASWYHKV 9
ASW H++
Sbjct: 37 ASWTHRI 43


>sp|RL4_PYRFU|LARGE ribosomal subunit protein uL4|Pyrococcus furiosus (strain ATCC

Query: 3 ASWYHKV 9
ASW H++
Sbjct: 37 ASWTHRI 43


>sp|SYP_META3|PROLINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 ASWYHKV 9
+ WYH +
Sbjct: 5 SEWYHNI 11


>sp|IF2A_PYRAE|TRANSLATION initiation factor 2 subunit|Pyrobaculum aerophilum (strain ATCC

Query: 1 LAASWYHKV 9
+ SW+H +
Sbjct: 45 IVQSWFHSI 53


>sp|TCPA_THEAD|NAD(+) hydrolase TcpA|Theionarchaea archaeon (strain DG-70-1)

Query: 5 WYHKVP 10
WYH P
Sbjct: 79 WYHSRP 84


>sp|SYP_ARCFU|PROLINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ASWYHKV 9
+ WYH+V
Sbjct: 10 SEWYHEV 16




268|Sequence|1336|1345|YHKVPVVEIK

>sp|NIFK_METTH|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter

Query: 1 YHKVPVV 7
YH++PVV
Sbjct: 423 YHRIPVV 429


>sp|Y905_ARCFU|UPF0292 protein AF_0905|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YHKVPVVEIK 10
Y K+P VEIK
Sbjct: 86 YGKIPDVEIK 95


>sp|BIOW_METRM|6-CARBOXYHEXANOATE--COA ligase|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 YHKVPVVEIK 10
YH++P+++ K
Sbjct: 210 YHRIPILKDK 219


>sp|NADK_METLZ|NAD kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 HKVPVVEI 9
H+VPVV I
Sbjct: 76 HQVPVVGI 83


>sp|RPO3_METAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina acetivorans (strain ATCC

Query: 4 VPVVEIK 10
VP+VE+K
Sbjct: 126 VPIVELK 132


>sp|DHAS_METTH|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 HKVPVVE 8
H+VPVV+
Sbjct: 232 HRVPVVD 238


>sp|PGK_METBR|PHOSPHOGLYCERATE kinase|Methanobacterium bryantii

Query: 3 KVPVVEI 9
K+PVVEI
Sbjct: 393 KLPVVEI 399


>sp|LEUC2_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus furiosus (strain ATCC

Query: 2 HKVPVVE 8
H++PV+E
Sbjct: 77 HRIPVIE 83


>sp|RL4_SULAC|LARGE ribosomal subunit protein uL4|Sulfolobus acidocaldarius (strain

Query: 2 HKVPVVE 8
HK PVVE
Sbjct: 209 HKSPVVE 215


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 2 HKVPVV 7
HKVPVV
Sbjct: 469 HKVPVV 474


>sp|Y904_METJA|UNCHARACTERIZED protein MJ0904|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YHKVPVV 7
Y KVPV+
Sbjct: 91 YQKVPVI 97


>sp|Y1583_METJA|PROBABLE S-adenosyl-L-methionine-binding protein MJ1583|Methanocaldococcus

Query: 1 YHKVPVVEIK 10
Y++ P+++IK
Sbjct: 106 YNETPIIDIK 115


>sp|UPP_PYRIL|URACIL phosphoribosyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 YHKVPVVE 8
Y K+P VE
Sbjct: 117 YSKIPTVE 124




269|Sequence|1341|1350|VVEIKGHLDS

>sp|PSB_NATPD|PROTEASOME subunit beta|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VEIKGHLD 9
VEIKGH D
Sbjct: 227 VEIKGHKD 234


>sp|YB50_METTW|IRON-SULFUR cluster assembly SufBD family|Methanothermobacter

Query: 1 VVEIKGHLD 9
V E+KGHL+
Sbjct: 313 VPEVKGHLE 321


>sp|Y1150_METTH|IRON-SULFUR cluster assembly SufBD family|Methanothermobacter

Query: 1 VVEIKGHLD 9
V E+KGHL+
Sbjct: 313 VPEVKGHLE 321


>sp|Y2365_ARCFU|IRON-SULFUR cluster assembly SufBD family|Archaeoglobus fulgidus (strain ATCC

Query: 3 EIKGHLD 9
E+KGHL+
Sbjct: 273 EVKGHLE 279


>sp|AOCD_METKA|ORNITHINE cyclodeaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 VVEIKGHL 8
VVE++GH+
Sbjct: 7 VVELRGHI 14


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 VEIKGHLD 9
VE++GH D
Sbjct: 259 VEVQGHRD 266


>sp|LYSK_AERPE|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Aeropyrum pernix (strain

Query: 1 VVEIKGHLDS 10
VV + GHLD+
Sbjct: 66 VVGLVGHLDT 75


>sp|AROA_METMP|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain DSM

Query: 1 VVEIKGHLDS 10
VVEI+G + S
Sbjct: 156 VVEIRGDMSS 165


>sp|AROA_METM6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 VVEIKGHLDS 10
VVEI+G + S
Sbjct: 156 VVEIRGDMSS 165


>sp|AROA_METM7|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 VVEIKGHLDS 10
VVEI+G + S
Sbjct: 156 VVEIRGDMSS 165


>sp|RS4E_AERPE|SMALL ribosomal subunit protein eS4|Aeropyrum pernix (strain ATCC 700893

Query: 3 EIKGHL 8
EIKGH+
Sbjct: 177 EIKGHI 182


>sp|MTRA_METHJ|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanospirillum hungatei JF-1

Query: 3 EIKGHL 8
E+KGHL
Sbjct: 81 EVKGHL 86




270|Sequence|1346|1355|GHLDSMNVSL

>sp|PYRB_PYRCJ|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum calidifontis

Query: 1 GHLDSMNVSL 10
GH+D +NV L
Sbjct: 148 GHVDGLNVGL 157


>sp|PYRB_PYRAR|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum arsenaticum

Query: 1 GHLDSMNVSL 10
GH+D +N+ L
Sbjct: 148 GHIDGLNIGL 157


>sp|CAPPA_METBF|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GHLDSMN 7
GHLD MN
Sbjct: 246 GHLDLMN 252


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 LDSMNVSL 10
LDS+NVS
Sbjct: 81 LDSLNVSF 88


>sp|SYM_METM7|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 LDSMNVSL 10
LDS+NVS
Sbjct: 81 LDSLNVSF 88


>sp|SYM_METM5|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 LDSMNVSL 10
LDS+NVS
Sbjct: 81 LDSLNVSF 88


>sp|FAEHP_METJA|BIFUNCTIONAL enzyme Fae/Hps|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HLDSMNVS 9
+LD MNVS
Sbjct: 268 YLDMMNVS 275


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 1 GHLDSMNVSL 10
GH+D +SL
Sbjct: 269 GHMDKKAISL 278




271|Sequence|1351|1360|MNVSLNQEDL

>sp|NK_THEAC|NUCLEOSIDE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 NVSLNQEDL 10
N SLN EDL
Sbjct: 264 NFSLNMEDL 272


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NVSLNQED 9
NVS N+ED
Sbjct: 277 NVSFNRED 284




272|Sequence|1356|1365|NQEDLNLLFR

>sp|IF2P_METS5|PROBABLE translation initiation factor IF-2|Metallosphaera sedula (strain

Query: 2 QEDLNLLFR 10
QEDL +LF+
Sbjct: 556 QEDLEILFK 564


>sp|GATA_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 1 NQEDLNLLF 9
N EDL LLF
Sbjct: 212 NAEDLGLLF 220


>sp|HMDX_METJA|H(2)-FORMING methylenetetrahydromethanopterin dehydrogenase-related protein

Query: 2 QEDLNLLFR 10
QEDLNL +
Sbjct: 278 QEDLNLALK 286


>sp|GATA_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Sulfolobus acidocaldarius (strain ATCC

Query: 1 NQEDLNLLF 9
N EDL LL+
Sbjct: 209 NAEDLELLY 217


>sp|ARGJ_ARCFU|ARGININE biosynthesis bifunctional protein ArgJ|Archaeoglobus fulgidus

Query: 1 NQEDLNLLFR 10
N ED NL+ R
Sbjct: 264 NDEDANLIAR 273


>sp|PYRB_PICTO|ASPARTATE carbamoyltransferase catalytic subunit|Picrophilus torridus

Query: 1 NQEDLNLLF 9
+ EDLNL+F
Sbjct: 14 SDEDLNLIF 22


>sp|MTHT_METTF|TYPE II methyltransferase M.MthTI|Methanothermobacter thermautotrophicus

Query: 2 QEDLNLLF 9
+EDLNL F
Sbjct: 164 REDLNLKF 171


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 3 EDLNLLFR 10
EDL +LFR
Sbjct: 544 EDLKVLFR 551




273|Sequence|1361|1370|NLLFRILTEN

>sp|Y774_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0774|Methanocaldococcus

Query: 2 LLFRILTEN 10
LL+ ILTEN
Sbjct: 110 LLYNILTEN 118


>sp|ENDA_THEAC|TRNA-SPLICING endonuclease|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 FRILTEN 10
FR+LTEN
Sbjct: 182 FRLLTEN 188


>sp|TRUB_ARCFU|PROBABLE tRNA pseudouridine synthase B|Archaeoglobus fulgidus (strain ATCC

Query: 1 NLLFRILTEN 10
++LFR++TE+
Sbjct: 154 DVLFRVVTES 163


>sp|GATD_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Archaeoglobus fulgidus (strain ATCC

Query: 2 LLFRILTEN 10
LL+ IL+EN
Sbjct: 129 LLYNILSEN 137


>sp|GATD_METS5|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Metallosphaera sedula (strain ATCC 51363

Query: 2 LLFRILTEN 10
+LF IL+EN
Sbjct: 136 ILFSILSEN 144


>sp|PSB2_THEGJ|PROTEASOME subunit beta 2|Thermococcus gammatolerans (strain DSM 15229

Query: 1 NLLFRILTEN 10
NLL IL EN
Sbjct: 88 NLLSNILNEN 97


>sp|PSB1_PYRHO|PROTEASOME subunit beta 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NLLFRILTEN 10
NLL IL EN
Sbjct: 87 NLLSNILNEN 96


>sp|PSB1_PYRFU|PROTEASOME subunit beta 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NLLFRILTEN 10
NLL IL EN
Sbjct: 87 NLLSNILNEN 96


>sp|PSB1_PYRAB|PROTEASOME subunit beta 1|Pyrococcus abyssi (strain GE5 /

Query: 1 NLLFRILTEN 10
NLL IL EN
Sbjct: 87 NLLSNILNEN 96


>sp|GATD_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Sulfolobus acidocaldarius (strain ATCC

Query: 2 LLFRILTEN 10
+LF IL+EN
Sbjct: 138 ILFSILSEN 146


>sp|GATD_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Sulfurisphaera tokodaii (strain DSM

Query: 2 LLFRILTEN 10
+LF IL+EN
Sbjct: 140 VLFSILSEN 148


>sp|GATD_SACI7|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 2 LLFRILTEN 10
+LF IL+EN
Sbjct: 141 VLFSILSEN 149


>sp|GATD_SACI6|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain M.16.4

Query: 2 LLFRILTEN 10
+LF IL+EN
Sbjct: 141 VLFSILSEN 149


>sp|GATD_SACI4|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain M.14.25

Query: 2 LLFRILTEN 10
+LF IL+EN
Sbjct: 141 VLFSILSEN 149


>sp|GATD_SACI3|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 2 LLFRILTEN 10
+LF IL+EN
Sbjct: 141 VLFSILSEN 149


>sp|GATD_SACI2|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 2 LLFRILTEN 10
+LF IL+EN
Sbjct: 141 VLFSILSEN 149


>sp|GATD_SACI1|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 2 LLFRILTEN 10
+LF IL+EN
Sbjct: 141 VLFSILSEN 149


>sp|GATD_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus solfataricus (strain ATCC

Query: 2 LLFRILTEN 10
+LF IL+EN
Sbjct: 140 VLFSILSEN 148




274|Sequence|1366|1375|ILTENLCEGT

>sp|FAU1_AERPE|PROBABLE ribonuclease FAU-1|Aeropyrum pernix (strain ATCC 700893

Query: 1 ILTENLCE 8
+LT+ LCE
Sbjct: 446 LLTDRLCE 453


>sp|Y064_ARCFU|UNCHARACTERIZED protein AF_0064|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 ENLCEGT 10
EN+C GT
Sbjct: 56 ENVCVGT 62




275|Sequence|1371|1380|LCEGTEDLDK

>sp|DAPA_METLZ|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LCEGTEDLDK 10
+ +GT+DLD+
Sbjct: 175 IIQGTQDLDR 184


>sp|AATB_THEGJ|A-TYPE ATP synthase subunit B|Thermococcus gammatolerans (strain DSM

Query: 3 EGTEDLD 9
EGT DLD
Sbjct: 59 EGTRDLD 65


>sp|AATB_THEKO|A-TYPE ATP synthase subunit B|Thermococcus kodakarensis (strain ATCC

Query: 3 EGTEDLD 9
EGT DLD
Sbjct: 61 EGTRDLD 67


>sp|AATB_THESI|A-TYPE ATP synthase subunit B|Thermococcus sp. (strain KI)

Query: 3 EGTEDLD 9
EGT DLD
Sbjct: 59 EGTRDLD 65


>sp|AATB_DESSY|A-TYPE ATP synthase subunit B|Desulfurococcus sp. (strain SY)

Query: 3 EGTEDLD 9
EGT DLD
Sbjct: 59 EGTRDLD 65


>sp|AATB_THEON|A-TYPE ATP synthase subunit B|Thermococcus onnurineus (strain NA1)

Query: 3 EGTEDLD 9
EGT DLD
Sbjct: 61 EGTRDLD 67


>sp|AATB_PYRHO|A-TYPE ATP synthase subunit B|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 EGTEDLD 9
EGT DLD
Sbjct: 61 EGTRDLD 67


>sp|AATB_PYRAB|A-TYPE ATP synthase subunit B|Pyrococcus abyssi (strain GE5 /

Query: 3 EGTEDLD 9
EGT DLD
Sbjct: 58 EGTRDLD 64


>sp|AATB_PYRFU|A-TYPE ATP synthase subunit B|Pyrococcus furiosus (strain ATCC 43587

Query: 3 EGTEDLD 9
EGT DLD
Sbjct: 58 EGTRDLD 64


>sp|MTTB2_METAC|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina acetivorans (strain ATCC

Query: 1 LCEGTEDLD 9
LC+ TE++D
Sbjct: 139 LCDWTENID 147


>sp|COFC_METBU|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 2 CEGTEDLDK 10
CE T++LDK
Sbjct: 147 CEITDELDK 155


>sp|SYH_THEAC|HISTIDINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LCEGTEDLDK 10
LC GT +D+
Sbjct: 218 LCSGTRGIDE 227


>sp|Y1985_PYRAR|UPF0201 protein Pars_1985|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 CEGTEDLDK 10
CEG E L+K
Sbjct: 46 CEGHECLEK 54


>sp|RL1_THEKO|LARGE ribosomal subunit protein uL1|Thermococcus kodakarensis (strain

Query: 4 GTEDLD 9
GTED+D
Sbjct: 168 GTEDMD 173


>sp|MPTN_METMP|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 CEGTEDLDK 10
CE TE+L K
Sbjct: 222 CEITEELSK 230


>sp|EPDA_METMP|MINOR structural pilin EpdA|Methanococcus maripaludis (strain DSM 14266

Query: 3 EGTEDLDK 10
EGT LDK
Sbjct: 39 EGTRTLDK 46


>sp|DPO4_PICTO|DNA polymerase IV|Picrophilus torridus (strain ATCC 700027

Query: 1 LCEGTEDLDK 10
L E T D+DK
Sbjct: 247 LPENTRDIDK 256


>sp|MPTN_METJA|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CEGTEDLDK 10
CE TE+++K
Sbjct: 222 CEITEEIEK 230




276|Sequence|1376|1385|EDLDKVKPRV

>sp|Y1350_METJA|UNCHARACTERIZED protein MJ1350|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDLDKVKPRV 10
EDL+K+KP +
Sbjct: 210 EDLEKIKPYI 219


>sp|Y1609_METJA|UNCHARACTERIZED ATP-binding protein MJ1609|Methanocaldococcus jannaschii (strain

Query: 2 DLDKVKPRV 10
DLD +KP+V
Sbjct: 296 DLDYIKPKV 304


>sp|MTBA_METMA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EDLDKVK 7
EDLDK+K
Sbjct: 106 EDLDKIK 112


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EDLDKVKPRV 10
ED DK+ RV
Sbjct: 293 EDFDKIGKRV 302


>sp|UDGB_PYRAE|TYPE-5 uracil-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EDLDKVKPR 9
E+L+ V+PR
Sbjct: 146 EELEAVRPR 154


>sp|SYFB_THEON|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus onnurineus (strain NA1)

Query: 2 DLDKVKPRV 10
D DKVKP +
Sbjct: 146 DFDKVKPPI 154


>sp|SYFB_THEKO|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DLDKVKPRV 10
D DKVKP +
Sbjct: 146 DFDKVKPPI 154


>sp|SYFB_PYRFU|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DLDKVKP 8
D DKVKP
Sbjct: 146 DFDKVKP 152


>sp|LYSJ_SULAC|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfolobus

Query: 1 EDLDKVKP 8
+ LDKVKP
Sbjct: 77 QALDKVKP 84


>sp|SYFB_THEGJ|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 2 DLDKVKPRV 10
D DKVKP +
Sbjct: 146 DFDKVKPPI 154


>sp|SYK_PYRFU|LYSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EDLDKVKPRV 10
ED+D++K R+
Sbjct: 405 EDIDRIKLRI 414


>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 1 EDLDKVKPRV 10
E+L K+KP V
Sbjct: 225 EELKKIKPEV 234


>sp|HMGCS_PYRCJ|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 LDKVKPRV 10
LDKVKP +
Sbjct: 254 LDKVKPGI 261


>sp|SYFB_PYRHO|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DLDKVKP 8
D DK+KP
Sbjct: 146 DFDKIKP 152


>sp|Y147_METJA|UNCHARACTERIZED ATP-binding protein MJ0147|Methanocaldococcus jannaschii (strain

Query: 2 DLDKVKPRV 10
+LD +KP+V
Sbjct: 290 ELDYIKPKV 298


>sp|Y1010_METJA|UNCHARACTERIZED ATP-binding protein MJ1010|Methanocaldococcus jannaschii (strain

Query: 2 DLDKVKPRV 10
+LD +KP+V
Sbjct: 299 NLDYIKPKV 307


>sp|HEM1_THEAC|GLUTAMYL-TRNA reductase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EDLDKVKPRV 10
EDL+ +KP V
Sbjct: 60 EDLEAMKPNV 69


>sp|PYRG_METTP|CTP synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 EDLDKVKP 8
EDL++++P
Sbjct: 335 EDLERIQP 342


>sp|DAPB_METST|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 DLDKVKPRV 10
+L+KVKP V
Sbjct: 67 ELEKVKPDV 75


>sp|Y1403_ARCFU|UNCHARACTERIZED protein AF_1403|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DLDKVKPR 9
DLD+VK R
Sbjct: 210 DLDRVKGR 217


>sp|RL4_METBF|LARGE ribosomal subunit protein uL4|Methanosarcina barkeri (strain Fusaro

Query: 1 EDLDKVK 7
EDLDK K
Sbjct: 147 EDLDKTK 153


>sp|IF5A_PICTO|TRANSLATION initiation factor 5A|Picrophilus torridus (strain ATCC 700027

Query: 2 DLDKVKP 8
DL+K+KP
Sbjct: 104 DLEKIKP 110




277|Sequence|1381|1390|VKPRVQETGE

>sp|CISY_HALVD|CITRATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 VKPRVQETGE 10
++PR + TGE
Sbjct: 359 IRPRARYTGE 368


>sp|RL4_SULTO|LARGE ribosomal subunit protein uL4|Sulfurisphaera tokodaii (strain DSM

Query: 3 PRVQETGE 10
PRV+ TGE
Sbjct: 78 PRVKTTGE 85


>sp|CISY_PYRFU|CITRATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VKPRVQETGE 10
++PR+Q GE
Sbjct: 356 IRPRLQYVGE 365


>sp|PRIS_METPE|DNA primase small subunit PriS|Methanosphaerula palustris (strain ATCC

Query: 2 KPRVQETG 9
K R+QETG
Sbjct: 271 KKRLQETG 278


>sp|NADK_HALMA|NAD kinase|Haloarcula marismortui (strain ATCC 43049

Query: 2 KPRVQETGE 10
KPR+Q +G+
Sbjct: 129 KPRLQASGD 137




278|Sequence|1386|1395|QETGEIKEPL

>sp|ARCD_HALSA|ARGININE/ORNITHINE antiporter ArcD|Halobacterium salinarum (strain ATCC 700922

Query: 1 QETGEIKEPL 10
+ETG + EP+
Sbjct: 414 EETGTVSEPM 423


>sp|ARCD_HALS3|ARGININE/ORNITHINE antiporter ArcD|Halobacterium salinarum (strain ATCC 29341

Query: 1 QETGEIKEPL 10
+ETG + EP+
Sbjct: 414 EETGTVSEPM 423


>sp|SYM_ARCFU|METHIONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ETGEIKEP 9
E GEIKEP
Sbjct: 161 EPGEIKEP 168


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 ETGEIKEPL 10
E GEIK+P+
Sbjct: 165 EPGEIKDPV 173


>sp|FAU1_NATPD|PROBABLE ribonuclease FAU-1|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ETGEIKEPL 10
E GEI EPL
Sbjct: 438 EAGEISEPL 446


>sp|NNRE_CENSY|NAD(P)H-HYDRATE epimerase|Cenarchaeum symbiosum (strain A)

Query: 3 TGEIKEP 9
TGEI+EP
Sbjct: 130 TGEIREP 136


>sp|TLDD_SACS2|ZINC metalloprotease TldD homolog|Saccharolobus solfataricus (strain

Query: 2 ETGEIKEPL 10
E EIKEPL
Sbjct: 378 ENSEIKEPL 386


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 ETGEIKEPL 10
E GEI++P+
Sbjct: 165 EPGEIRDPV 173


>sp|SYDND_HALMA|ASPARTATE--TRNA(ASP/ASN) ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 TGEIKEPL 10
TGE+ EPL
Sbjct: 293 TGELDEPL 300


>sp|IF2P_METMJ|PROBABLE translation initiation factor IF-2|Methanoculleus marisnigri

Query: 2 ETGEIKEPL 10
E G IK+PL
Sbjct: 394 EAGTIKDPL 402


>sp|ENDA_METBU|TRNA-SPLICING endonuclease|Methanococcoides burtonii (strain DSM 6242

Query: 4 GEIKEPL 10
GE+KEPL
Sbjct: 168 GEMKEPL 174


>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 2 ETGEIKEPL 10
ET EIK+PL
Sbjct: 163 ETVEIKKPL 171


>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 2 ETGEIKEPL 10
+ GE+KEPL
Sbjct: 200 DDGELKEPL 208


>sp|PDXT_STAMF|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Staphylothermus marinus (strain

Query: 1 QETGEIKEPL 10
Q GE K+PL
Sbjct: 97 QVVGETKQPL 106


>sp|NNRE_NITMS|NAD(P)H-HYDRATE epimerase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 TGEIKEP 9
+GEI+EP
Sbjct: 132 SGEIREP 138


>sp|MPTA_THEKO|GTP cyclohydrolase MptA|Thermococcus kodakarensis (strain ATCC

Query: 1 QETGEIKEPL 10
+E EI+EPL
Sbjct: 7 EEVPEIREPL 16


>sp|Y1196_THEGJ|DNA-BINDING protein TGAM_1196|Thermococcus gammatolerans (strain DSM 15229

Query: 2 ETGEIKEPL 10
+ G+I+EP+
Sbjct: 80 QAGQIREPI 88


>sp|RFCS_PICTO|REPLICATION factor C small subunit|Picrophilus torridus (strain ATCC 700027

Query: 1 QETGEIK 7
Q TGEIK
Sbjct: 206 QSTGEIK 212




279|Sequence|1391|1400|IKEPLEISIS

>sp|FDHD_PICTO|SULFUR carrier protein FdhD|Picrophilus torridus (strain ATCC 700027

Query: 1 IKEPLEISI 9
++EPL+ISI
Sbjct: 25 VEEPLQISI 33


>sp|ENDA_THEON|TRNA-SPLICING endonuclease|Thermococcus onnurineus (strain NA1)

Query: 1 IKEPLEISIS 10
+KEP+E +S
Sbjct: 1 MKEPIEFKLS 10


>sp|RF1_METM7|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C7

Query: 1 IKEPLEISI 9
+KEPLE+ +
Sbjct: 80 LKEPLEMGV 88


>sp|RF1_METM6|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C6

Query: 1 IKEPLEISI 9
+KEPLE+ +
Sbjct: 80 LKEPLEMGV 88


>sp|RF1_METM5|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C5

Query: 1 IKEPLEISI 9
+KEPLE+ +
Sbjct: 80 LKEPLEMGV 88


>sp|RF1_METMP|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain

Query: 1 IKEPLEISI 9
+KEPLE+ +
Sbjct: 80 LKEPLEMGV 88


>sp|NPD_SACS2|NAD-DEPENDENT protein deacetylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IKEPLEISI 9
++EP+EIS+
Sbjct: 226 VREPVEISL 234


>sp|QUEC_METS3|7-CYANO-7-DEAZAGUANINE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 IKEPLEISIS 10
IK P+E+S S
Sbjct: 183 IKAPMELSYS 192


>sp|SYFA_SULTO|PHENYLALANINE--TRNA ligase alpha subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IKEPLEIS 8
I+EPLEI
Sbjct: 168 IREPLEIK 175




280|Sequence|1396|1405|EISISQDVHD

***** No hits found ******


281|Sequence|1401|1410|QDVHDSKNTL

>sp|SYT_METB6|THREONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 QDVHDSKNTL 10
+D+H SKNTL
Sbjct: 298 RDMHISKNTL 307


>sp|SRP19_HALSA|SIGNAL recognition particle 19 kDa|Halobacterium salinarum (strain ATCC

Query: 1 QDVHDSKNTL 10
+D D+KNTL
Sbjct: 70 KDADDAKNTL 79


>sp|SRP19_HALS3|SIGNAL recognition particle 19 kDa|Halobacterium salinarum (strain ATCC

Query: 1 QDVHDSKNTL 10
+D D+KNTL
Sbjct: 70 KDADDAKNTL 79


>sp|Y329_METJA|UNCHARACTERIZED protein MJ0329|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QDVHDSKNTL 10
Q++ D KNTL
Sbjct: 170 QEIADQKNTL 179


>sp|SYT_METPE|THREONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 QDVHDSKNTL 10
+D+H S NTL
Sbjct: 294 RDMHISPNTL 303


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 QDVHDSKNTL 10
D+H S NTL
Sbjct: 295 HDMHISPNTL 304


>sp|FTTA_LOKSG|TRANSCRIPTION termination factor FttA|Lokiarchaeum sp. (strain GC14_75)

Query: 5 DSKNTL 10
DSKNTL
Sbjct: 525 DSKNTL 530




282|Sequence|1406|1415|SKNTLTTGVE

>sp|DCDB_METB6|DCTP deaminase, dUMP-forming|Methanoregula boonei (strain DSM 21154

Query: 2 KNTLTTGVE 10
K T+T+GVE
Sbjct: 55 KTTVTSGVE 63


>sp|RL3_METAC|LARGE ribosomal subunit protein uL3|Methanosarcina acetivorans (strain

Query: 1 SKNTLTTGVE 10
+KN+LT G+E
Sbjct: 58 TKNSLTQGME 67


>sp|RL3_METBF|LARGE ribosomal subunit protein uL3|Methanosarcina barkeri (strain

Query: 1 SKNTLTTGVE 10
+KN+LT G+E
Sbjct: 58 TKNSLTQGME 67


>sp|RL3_METMA|LARGE ribosomal subunit protein uL3|Methanosarcina mazei (strain ATCC

Query: 2 KNTLTTGVE 10
KN+LT G+E
Sbjct: 59 KNSLTQGME 67




283|Sequence|1411|1420|TTGVEEIRSV

>sp|PYLC_METBF|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 TTGVEEIRSV 10
T GVEEIR++
Sbjct: 269 TDGVEEIRAI 278


>sp|RPO4_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo4|Sulfolobus acidocaldarius (strain

Query: 2 TGVEEIRSV 10
T VEE+RSV
Sbjct: 79 TTVEEVRSV 87


>sp|IF6_SACI7|TRANSLATION initiation factor 6|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 TTGVEEIR 8
T GVEEIR
Sbjct: 130 TLGVEEIR 137


>sp|IF6_SACI2|TRANSLATION initiation factor 6|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 TTGVEEIR 8
T GVEEIR
Sbjct: 130 TLGVEEIR 137


>sp|IF6_SACI1|TRANSLATION initiation factor 6|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 TTGVEEIR 8
T GVEEIR
Sbjct: 130 TLGVEEIR 137


>sp|IF6_SACI6|TRANSLATION initiation factor 6|Saccharolobus islandicus (strain M.16.4 /

Query: 1 TTGVEEIR 8
T GVEEIR
Sbjct: 130 TLGVEEIR 137


>sp|IF6_SACI4|TRANSLATION initiation factor 6|Saccharolobus islandicus (strain M.14.25 /

Query: 1 TTGVEEIR 8
T GVEEIR
Sbjct: 130 TLGVEEIR 137


>sp|IF6_SACI3|TRANSLATION initiation factor 6|Saccharolobus islandicus (strain M.16.27)

Query: 1 TTGVEEIR 8
T GVEEIR
Sbjct: 130 TLGVEEIR 137


>sp|AATF_ARCFU|A-TYPE ATP synthase subunit F|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TTGVEEIR 8
T GVEEIR
Sbjct: 81 TGGVEEIR 88


>sp|PYRF_THEAC|OROTIDINE 5'-phosphate decarboxylase|Thermoplasma acidophilum (strain ATCC

Query: 2 TGVEEIRSV 10
TG+E +RSV
Sbjct: 90 TGLESLRSV 98


>sp|COFH_META3|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus aeolicus (strain ATCC

Query: 3 GVEEIRSV 10
G EEIR+V
Sbjct: 336 GAEEIRNV 343


>sp|TFE_ARCFU|TRANSCRIPTION factor E|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TTGVEEI 7
TTGVEE+
Sbjct: 6 TTGVEEL 12


>sp|AATB_METMP|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain DSM 14266

Query: 1 TTGVEEIRSV 10
T GV+E RS+
Sbjct: 419 TQGVDEDRSI 428


>sp|AATB_METM7|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C7 /

Query: 1 TTGVEEIRSV 10
T GV+E RS+
Sbjct: 419 TQGVDEDRSI 428




284|Sequence|1416|1425|EIRSVDIINM

>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 EIRSVDII 8
EIR VDII
Sbjct: 585 EIRFVDII 592




285|Sequence|1421|1430|DIINMLLNFE

>sp|APGM_SULAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 DIINMLLNF 9
D+IN+LLN+
Sbjct: 396 DVINLLLNY 404


>sp|APGM_SULTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DIINMLLNF 9
D+IN+LLN+
Sbjct: 396 DVINLLLNY 404


>sp|APGM_IGNH4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 DIINMLLNF 9
D+IN++LN+
Sbjct: 399 DLINLMLNY 407


>sp|CAS1A_ARCFU|CRISPR-ASSOCIATED endonuclease Cas1 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DIINMLLNF 9
DI+N +LN+
Sbjct: 205 DIVNAMLNY 213


>sp|Y274_PYRHO|PUTATIVE GTPase PH0274|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DIINMLLN 8
DII+M+LN
Sbjct: 291 DIISMVLN 298


>sp|APGM_SACI6|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 DIINMLLNF 9
D+ N+LLN+
Sbjct: 397 DVTNILLNY 405


>sp|APGM_SACI4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DIINMLLNF 9
D+ N+LLN+
Sbjct: 397 DVTNILLNY 405


>sp|APGM_SACI3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.27)

Query: 1 DIINMLLNF 9
D+ N+LLN+
Sbjct: 397 DVTNILLNY 405


>sp|APGM_SACI1|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 DIINMLLNF 9
D+ N+LLN+
Sbjct: 397 DVTNILLNY 405


>sp|APGM_SACI7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 DIINMLLNF 9
D+ N+LLN+
Sbjct: 397 DVTNILLNY 405


>sp|APGM_SACI2|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 DIINMLLNF 9
D+ N+LLN+
Sbjct: 397 DVTNILLNY 405


>sp|APGM_SACS2|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus solfataricus (strain ATCC

Query: 1 DIINMLLNF 9
D+ N+LLN+
Sbjct: 397 DVTNILLNY 405


>sp|Y2548_METHJ|PUTATIVE HTH-type transcriptional regulatory protein|Methanospirillum

Query: 1 DIINMLLN 8
D+IN++LN
Sbjct: 299 DLINLILN 306


>sp|HIS3_METTH|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanothermobacter thermautotrophicus (strain

Query: 3 INMLLNF 9
+N+LLNF
Sbjct: 8 VNILLNF 14


>sp|Y3513_METJA|MCM-LIKE protein MJECL13|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IINMLLNFE 10
+INM NFE
Sbjct: 1 MINMCYNFE 9




286|Sequence|1426|1435|LLNFEIKEVV

>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LLNFEIKEV 9
L N EIKE+
Sbjct: 474 LCNIEIKEI 482


>sp|GATA_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 2 LNFEIKE 8
LNFE+KE
Sbjct: 238 LNFELKE 244


>sp|SQRD_ACIAM|SULFIDE-QUINONE reductase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 3 NFEIKEV 9
NF+IKE+
Sbjct: 238 NFKIKEI 244


>sp|ENO_PICTO|ENOLASE torridus (strain ATCC 700027

Query: 2 LNFEIKE 8
+NFEIK+
Sbjct: 1 MNFEIKD 7


>sp|RS4E_NANEQ|SMALL ribosomal subunit protein eS4|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 NFEIKEVV 10
NF+I+EV+
Sbjct: 166 NFKIREVI 173


>sp|NK_METJA|NUCLEOSIDE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLNFEIKE 8
LLNFEI +
Sbjct: 196 LLNFEIDD 203


>sp|RNP2_SULTO|RIBONUCLEASE P protein component 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 NFEIKEV 9
NFEI+E+
Sbjct: 37 NFEIREI 43


>sp|Y1479_METJA|UNCHARACTERIZED aminotransferase MJ1479|Methanocaldococcus jannaschii (strain

Query: 2 LNFEIKEVV 10
L++EI+E+V
Sbjct: 13 LSYEIREIV 21


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LLNFEIKEV 9
L NF I+EV
Sbjct: 649 LANFSIREV 657




287|Sequence|1431|1440|IKEVVVTLMK

>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IKEVVVTLMK 10
+ EVVVTL+K
Sbjct: 706 LTEVVVTLLK 715




288|Sequence|1436|1445|VTLMKKSEKK

>sp|RL3_METM6|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain C6

Query: 1 VTLMKKSEKK 10
+TL+KK EKK
Sbjct: 114 LTLVKKEEKK 123


>sp|RL3_METM7|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain C7

Query: 1 VTLMKKSEKK 10
+TL+KK EKK
Sbjct: 114 LTLVKKEEKK 123


>sp|Y500_METJA|UNCHARACTERIZED protein MJ0500|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VTLMKKSEK 9
V ++KKSEK
Sbjct: 135 VNMLKKSEK 143




289|Sequence|1441|1450|KSEKKGRPLH

>sp|RS6E_NATPD|SMALL ribosomal subunit protein eS6|Natronomonas pharaonis (strain ATCC

Query: 2 SEKKGRPLH 10
S++ GRP+H
Sbjct: 55 SDQSGRPMH 63


>sp|IMDH_NITMS|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 EKKGRPL 9
+KKGRPL
Sbjct: 209 DKKGRPL 215


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 2 SEKKGRPLH 10
SEK G PLH
Sbjct: 459 SEKYGVPLH 467


>sp|GLPK_THEON|GLYCEROL kinase|Thermococcus onnurineus (strain NA1)

Query: 3 EKKGRPLH 10
+K G+PLH
Sbjct: 89 DKSGKPLH 96


>sp|Y429_METAC|PUTATIVE nickel insertion protein|Methanosarcina acetivorans (strain ATCC

Query: 4 KKGRPLH 10
KKGRP H
Sbjct: 285 KKGRPAH 291


>sp|Y1617_METMA|PUTATIVE nickel insertion protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 KKGRPLH 10
KKGRP H
Sbjct: 285 KKGRPAH 291


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 SEKKGRPLH 10
SEK G PLH
Sbjct: 534 SEKLGIPLH 542


>sp|Y761_METBF|PUTATIVE nickel insertion protein|Methanosarcina barkeri (strain Fusaro /

Query: 4 KKGRPLH 10
KKGRP H
Sbjct: 285 KKGRPAH 291


>sp|NEP1_PYRCJ|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum calidifontis

Query: 1 KSEKKGRP 8
K+E++GRP
Sbjct: 53 KAERRGRP 60


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 EKKGRPLH 10
+ KGRP+H
Sbjct: 539 DPKGRPMH 546


>sp|DHYS_METTE|PROBABLE deoxyhypusine synthase|Methanosarcina thermophila

Query: 4 KKGRPLH 10
K+G PLH
Sbjct: 205 KEGNPLH 211


>sp|DHYS1_METMA|PROBABLE deoxyhypusine synthase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 KKGRPLH 10
K+G PLH
Sbjct: 205 KEGNPLH 211


>sp|Y828_PYRHO|PUTATIVE gamma-glutamylcyclotransferase PH0828|Pyrococcus horikoshii

Query: 4 KKGRPLH 10
+KG+PLH
Sbjct: 17 RKGKPLH 23


>sp|MRE11_METMP|DNA double-strand break repair protein|Methanococcus maripaludis

Query: 1 KSEKKGRPL 9
KS++KG+P
Sbjct: 89 KSQQKGKPF 97


>sp|CHEB_METBU|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Methanococcoides

Query: 5 KGRPLH 10
KG+P+H
Sbjct: 252 KGKPMH 257


>sp|Y3524_METJA|UNCHARACTERIZED protein MJECL24|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KSEKKGRPL 9
K+E++G+P+
Sbjct: 226 KAEREGKPV 234


>sp|Y811_METTH|UPF0305 protein MTH_811|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 KGRPLH 10
KG PLH
Sbjct: 104 KGEPLH 109




290|Sequence|1446|1455|GRPLHELNVL

>sp|TMBL2_PYRFU|PUTATIVE HTH-type transcriptional regulator TrmBL2|Pyrococcus furiosus

Query: 2 RPLHELNVL 10
RP+H NVL
Sbjct: 73 RPVHPANVL 81


>sp|TRKA_PYRAB|TRK system potassium uptake protein|Pyrococcus abyssi (strain GE5 /

Query: 1 GRPLHELNV 9
G+P+ ELN+
Sbjct: 166 GKPIKELNL 174


>sp|TRKA_PYRHO|TRK system potassium uptake protein|Pyrococcus horikoshii (strain ATCC

Query: 1 GRPLHELNV 9
G+P+ ELN+
Sbjct: 166 GKPVKELNL 174


>sp|COBS_METBU|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GRPLHE 6
G+P+HE
Sbjct: 168 GKPIHE 173


>sp|TMBL2_THEKO|DNA-BINDING HTH-type transcriptional repressor TrmBL2|Thermococcus

Query: 2 RPLHELNVL 10
RP+H N+L
Sbjct: 73 RPVHPENIL 81


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 2 RPLHELNVL 10
RPLHE +
Sbjct: 1206 RPLHEYKAI 1214


>sp|DPOL_PYRWO|DNA polymerase|Pyrococcus woesei

Query: 2 RPLHELNVL 10
RPLHE +
Sbjct: 669 RPLHEYKAI 677


>sp|DPOL_PYRGL|DNA polymerase|Pyrococcus glycovorans

Query: 2 RPLHELNVL 10
RPLHE +
Sbjct: 669 RPLHEYKAI 677


>sp|DPOL_PYRFU|DNA polymerase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RPLHELNVL 10
RPLHE +
Sbjct: 669 RPLHEYKAI 677


>sp|FOLD_PYRCJ|BIFUNCTIONAL protein FolD|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GRPLHE 6
G+PLHE
Sbjct: 3 GKPLHE 8


>sp|HEM3_METBU|PROBABLE porphobilinogen deaminase|Methanococcoides burtonii (strain DSM

Query: 2 RPLHEL 7
RPLHE+
Sbjct: 44 RPLHEV 49


>sp|RL24_METTP|LARGE ribosomal subunit protein uL24|Methanothrix thermoacetophila

Query: 2 RPLHELNVL 10
RP+H NV+
Sbjct: 91 RPIHPSNVM 99


>sp|ASPD_METMA|L-ASPARTATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RPLHELNV 9
R +HE+NV
Sbjct: 219 RNIHEINV 226


>sp|CBIH_METTH|PROBABLE cobalt-factor III C(17)-methyltransferase|Methanothermobacter

Query: 1 GRPLHELNVL 10
G PLH+ V+
Sbjct: 118 GAPLHDFAVI 127


>sp|FRHD_METTH|COENZYME F420 hydrogenase subunit delta|Methanothermobacter

Query: 2 RPLHELN 8
+PLHEL+
Sbjct: 105 QPLHELS 111


>sp|RL24_AERPE|LARGE ribosomal subunit protein uL24|Aeropyrum pernix (strain ATCC 700893

Query: 2 RPLHELNVL 10
RP+H NV+
Sbjct: 95 RPIHPSNVM 103




291|Sequence|1451|1460|ELNVLQLGME

***** No hits found ******


292|Sequence|1456|1465|QLGMEAKVKT

***** No hits found ******


293|Sequence|1461|1470|AKVKTYDMTA

>sp|RRP4_SULTO|EXOSOME complex component Rrp4|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 AKVKTYDMT 9
AK++TYD T
Sbjct: 125 AKIETYDRT 133


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AKVKTYDMT 9
+K+KTYD T
Sbjct: 15 SKIKTYDDT 23


>sp|RS4E_PYRAR|SMALL ribosomal subunit protein eS4|Pyrobaculum arsenaticum (strain DSM

Query: 1 AKVKTYD 7
AK+KT+D
Sbjct: 151 AKIKTFD 157




294|Sequence|1466|1475|YDMTAKAYLK

>sp|VAPC4_PYRHO|RIBONUCLEASE VapC4|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 MTAKAYLK 10
+TA+AYLK
Sbjct: 46 LTARAYLK 53


>sp|KDPA_HALSA|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 2 DMTAKAYLK 10
+MT K YLK
Sbjct: 74 EMTWKGYLK 82


>sp|KDPA_HALS3|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 2 DMTAKAYLK 10
+MT K YLK
Sbjct: 74 EMTWKGYLK 82


>sp|OGG1_ARCFU|8-OXOGUANINE DNA glycosylase/AP lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 MTAKAYLK 10
MTAK YL+
Sbjct: 158 MTAKKYLE 165


>sp|ILVC_METM7|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain C7 /

Query: 1 YDMTAKAYLK 10
YD K YLK
Sbjct: 89 YDAQIKPYLK 98




295|Sequence|1471|1480|KAYLKKISMQ

>sp|LEUD_SULTO|3-ISOPROPYLMALATE dehydratase small subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 YLKKISMQ 10
YLKK+S+Q
Sbjct: 156 YLKKVSVQ 163


>sp|Y3532_METJA|UNCHARACTERIZED protein MJECL32|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KAYLKKIS 8
K YLKK+S
Sbjct: 395 KGYLKKVS 402




296|Sequence|1476|1485|KISMQCFDFT

>sp|KORA_METTM|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter marburgensis (strain ATCC

Query: 5 QCFDFT 10
+CFDFT
Sbjct: 146 ECFDFT 151


>sp|KORA_METTH|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter thermautotrophicus

Query: 5 QCFDFT 10
+CFDFT
Sbjct: 146 ECFDFT 151


>sp|MUTS1_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 2 ISMQCFDF 9
++MQC DF
Sbjct: 23 LAMQCGDF 30


>sp|ATGT_SACS2|TRNA-GUANINE(15) transglycosylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KISMQCFD 8
KIS+ C+D
Sbjct: 398 KISIYCYD 405




297|Sequence|1481|1490|CFDFTDSKGE

>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 CFDFTDSKGE 10
CFD TDS+ +
Sbjct: 31 CFDDTDSQNQ 40


>sp|MCRA_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 2 FDFTDSKGE 10
FDFT+ +GE
Sbjct: 520 FDFTNVRGE 528


>sp|MCRA_METTH|METHYL-COENZYME M reductase subunit alpha|Methanothermobacter thermautotrophicus

Query: 2 FDFTDSKGE 10
FDFT+ +GE
Sbjct: 520 FDFTNVRGE 528


>sp|IF1A_METBU|TRANSLATION initiation factor 1A|Methanococcoides burtonii (strain DSM 6242

Query: 2 FDFTDSKGE 10
+DF DSK E
Sbjct: 78 WDFQDSKAE 86


>sp|ARGJ_METMA|GLUTAMATE N-acetyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CFDFTDSK 8
CF +TD+K
Sbjct: 183 CFAYTDAK 190


>sp|MCRA_METFE|METHYL-COENZYME M reductase subunit alpha|Methanothermus fervidus

Query: 2 FDFTDSKGE 10
FD+T+ +GE
Sbjct: 524 FDWTNPRGE 532


>sp|RIBB_ARCFU|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FDFTDSKGE 10
+DF D +GE
Sbjct: 21 YDFEDREGE 29


>sp|EF1A_METST|ELONGATION factor 1-alpha|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 CFDFTDSK 8
C D TD+K
Sbjct: 406 CIDITDAK 413


>sp|Y160_METLZ|PUTATIVE HTH-type transcriptional regulatory protein|Methanocorpusculum

Query: 2 FDFTDSKGE 10
FD SKGE
Sbjct: 32 FDLMTSKGE 40


>sp|PYRC_THEVO|DIHYDROOROTASE volcanium (strain ATCC 51530

Query: 1 CFDFTDSK 8
C DFT+ K
Sbjct: 350 CVDFTNEK 357


>sp|IF1A_DESA1|TRANSLATION initiation factor 1A|Desulfurococcus amylolyticus (strain DSM

Query: 2 FDFTDSKGE 10
+DF+ KGE
Sbjct: 77 WDFSSEKGE 85


>sp|Y773_METJA|UNCHARACTERIZED protein MJ0773|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FDFTDSKGE 10
F F DS GE
Sbjct: 127 FSFFDSNGE 135


>sp|SYT_STAMF|THREONINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 4 FTDSKGE 10
+TD KGE
Sbjct: 447 YTDEKGE 453


>sp|ASD_METMA|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanosarcina mazei

Query: 2 FDFTDSKGE 10
FD T KGE
Sbjct: 182 FDITVEKGE 190


>sp|ARGJ_ARCFU|ARGININE biosynthesis bifunctional protein ArgJ|Archaeoglobus fulgidus

Query: 1 CFDFTDSK 8
CF FT +K
Sbjct: 174 CFAFTSAK 181


>sp|PNCB_METBU|NICOTINATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 2 FDFTDSKGE 10
F TD+KGE
Sbjct: 131 FTVTDNKGE 139




298|Sequence|1486|1495|DSKGEPLHII

>sp|GADH_THEAC|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DSKGEPLHI 9
D G+PLHI
Sbjct: 476 DYSGKPLHI 484


>sp|Y811_METTH|UPF0305 protein MTH_811|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 KGEPLH 8
KGEPLH
Sbjct: 104 KGEPLH 109


>sp|RIFK_HALMA|RIBOFLAVIN kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DSKGEPLHII 10
DS+ EP H+I
Sbjct: 273 DSEYEPAHVI 282


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DSKGEPLH 8
D KG P+H
Sbjct: 539 DPKGRPMH 546


>sp|THII_AERPE|PROBABLE tRNA sulfurtransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DSKGEPLHII 10
D KGE LH I
Sbjct: 379 DLKGESLHSI 388


>sp|DPHB_METJA|DIPHTHINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GEPLHII 10
GEPLH I
Sbjct: 230 GEPLHCI 236


>sp|ARLMC_PYRFU|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus furiosus

Query: 1 DSKGEPLHI 9
D GEP+H+
Sbjct: 219 DPSGEPIHL 227


>sp|Y828_PYRHO|PUTATIVE gamma-glutamylcyclotransferase PH0828|Pyrococcus horikoshii

Query: 3 KGEPLH 8
KG+PLH
Sbjct: 18 KGKPLH 23


>sp|DPHB_METBF|DIPHTHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 GEPLHII 10
G+PLHI+
Sbjct: 231 GKPLHIL 237


>sp|Y1617_METMA|PUTATIVE nickel insertion protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 KGEPLHII 10
KG P HII
Sbjct: 286 KGRPAHII 293


>sp|TTUA_PYRHO|TRNA-5-METHYLURIDINE(54) 2-sulfurtransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GEPLHII 10
G PLHI+
Sbjct: 102 GAPLHIV 108


>sp|Y429_METAC|PUTATIVE nickel insertion protein|Methanosarcina acetivorans (strain ATCC

Query: 3 KGEPLHII 10
KG P HII
Sbjct: 286 KGRPAHII 293


>sp|DPHB_METMA|DIPHTHINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GEPLHII 10
G+PLHI+
Sbjct: 231 GKPLHIL 237


>sp|DPHB_METB6|DIPHTHINE synthase|Methanoregula boonei (strain DSM 21154

Query: 4 GEPLHII 10
G PLHI+
Sbjct: 223 GPPLHIL 229


>sp|DPHB_METMJ|DIPHTHINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 GEPLHII 10
G PLHI+
Sbjct: 224 GPPLHIL 230


>sp|ATGT_SULAC|TRNA-GUANINE(15) transglycosylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 SKGEPLHII 10
S+G+P H+
Sbjct: 217 SRGKPFHLF 225


>sp|Y761_METBF|PUTATIVE nickel insertion protein|Methanosarcina barkeri (strain Fusaro /

Query: 3 KGEPLHII 10
KG P H+I
Sbjct: 286 KGRPAHVI 293


>sp|DPHB_METLZ|DIPHTHINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 GEPLHII 10
G PLHI+
Sbjct: 225 GSPLHIL 231


>sp|ATGT_SULTO|TRNA-GUANINE(15) transglycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SKGEPLHII 10
S+G+P H+
Sbjct: 217 SRGKPFHLF 225


>sp|DHQS_METJA|3-DEHYDROQUINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DSKGEPLHII 10
+ KGEP+ ++
Sbjct: 322 NEKGEPISVV 331


>sp|DPHB_METAC|DIPHTHINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 GEPLHII 10
G PLHI+
Sbjct: 231 GNPLHIL 237


>sp|SYT_METPE|THREONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 GEPLHI 9
GEP+H+
Sbjct: 191 GEPIHV 196


>sp|DPHB_ARCFU|DIPHTHINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GEPLHII 10
G+PLH++
Sbjct: 215 GKPLHVM 221


>sp|SYT_METM7|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 KGEPLHI 9
KGEP H+
Sbjct: 195 KGEPPHV 201


>sp|DPHB_HALWD|DIPHTHINE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 GEPLHII 10
G+PLH++
Sbjct: 223 GDPLHLL 229


>sp|Y2029_AERPE|UPF0284 protein APE_2029.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 DSKGEPLHI 9
D G+P+H+
Sbjct: 221 DCVGDPVHV 229


>sp|ENO_METKA|ENOLASE kandleri (strain AV19 /

Query: 1 DSKGEP 6
DS+GEP
Sbjct: 14 DSRGEP 19


>sp|PCNA_METPE|DNA polymerase sliding clamp|Methanosphaerula palustris (strain ATCC

Query: 3 KGEPLHI 9
KG+P+H+
Sbjct: 82 KGDPVHL 88


>sp|CHEB_METBU|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Methanococcoides

Query: 3 KGEPLHII 10
KG+P+H +
Sbjct: 252 KGKPMHAV 259


>sp|SYM_HALMA|METHIONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DSKGEPLHII 10
D GE +H+I
Sbjct: 308 DDSGEIIHVI 317


>sp|DPHB_HALMA|DIPHTHINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 4 GEPLHII 10
G+PLH++
Sbjct: 230 GDPLHLL 236




299|Sequence|1491|1500|PLHIINSSNV

>sp|TTUA_METJA|TRNA-5-METHYLURIDINE(54) 2-sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PLHIINSSNV 10
PLH++N ++
Sbjct: 108 PLHVVNLKDI 117


>sp|ARGX_SULTO|GLUTAMATE--LYSW ligase ArgX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LHIINSSNV 10
+H INSS+V
Sbjct: 72 VHTINSSDV 80


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LHIINSSNV 10
+ I+NSSNV
Sbjct: 2262 IEIVNSSNV 2270




300|Sequence|1496|1505|NSSNVTDEPL

>sp|PGK2_METM7|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C7 /

Query: 3 SNVTDEPL 10
SN+TDEP+
Sbjct: 300 SNLTDEPI 307


>sp|ARNR1_SULAC|HTH-TYPE transcriptional activator ArnR1|Sulfolobus acidocaldarius (strain

Query: 2 SSNVTDEP 9
S NVTD+P
Sbjct: 95 SINVTDKP 102


>sp|EF1B_METMP|ELONGATION factor 1-beta|Methanococcus maripaludis (strain DSM 14266

Query: 4 NVTDEPL 10
VTDEPL
Sbjct: 39 GVTDEPL 45


>sp|Y1001_ARCFU|UNCHARACTERIZED protein AF_1001|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NSSNVTDEPL 10
+ SN+ DEP+
Sbjct: 143 SESNIGDEPV 152




301|Sequence|1501|1510|TDEPLLKMLL

>sp|DNLI_METS3|DNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 DEPLLK 7
DEPLLK
Sbjct: 348 DEPLLK 353




302|Sequence|1506|1515|LKMLLTKADS

>sp|COFG_METMP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LKMLLTKADS 10
+K +LTKAD+
Sbjct: 49 MKEILTKADT 58




303|Sequence|1511|1520|TKADSDGPEF

>sp|QUEC_METB6|7-CYANO-7-DEAZAGUANINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 TKADSDGPE 9
T+AD D PE
Sbjct: 73 TRADRDVPE 81


>sp|ACDB2_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 2 KADSDGPEF 10
K D +GP+F
Sbjct: 224 KVDPEGPQF 232


>sp|ACDB1_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 2 KADSDGPEF 10
K D +GP+F
Sbjct: 224 KVDPEGPQF 232


>sp|ACDB2_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 2 KADSDGPEF 10
K D +GP+F
Sbjct: 224 KVDPEGPQF 232


>sp|ACDB1_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 2 KADSDGPEF 10
K D +GP+F
Sbjct: 224 KVDPEGPQF 232


>sp|ACDB1_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 2 KADSDGPEF 10
K D +GP+F
Sbjct: 224 KVDPEGPQF 232


>sp|ACDB2_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 2 KADSDGPEF 10
K D +GP+F
Sbjct: 225 KVDPEGPQF 233


>sp|FOR_THELN|TUNGSTEN-CONTAINING formaldehyde ferredoxin oxidoreductase|Thermococcus litoralis

Query: 4 DSDGPEF 10
D D PEF
Sbjct: 360 DDDAPEF 366


>sp|THII_THEAC|TRNA sulfurtransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KADSDGP 8
+AD DGP
Sbjct: 53 EADGDGP 59


>sp|RL5_HALSA|LARGE ribosomal subunit protein uL5|Halobacterium salinarum (strain

Query: 1 TKADSDGPEF 10
TKA S PEF
Sbjct: 51 TKAKSPEPEF 60


>sp|RL5_HALS3|LARGE ribosomal subunit protein uL5|Halobacterium salinarum (strain

Query: 1 TKADSDGPEF 10
TKA S PEF
Sbjct: 51 TKAKSPEPEF 60




304|Sequence|1516|1525|DGPEFKTIHD

>sp|RNZ_HALSA|RIBONUCLEASE Z|Halobacterium salinarum (strain ATCC 700922

Query: 2 GPEFKTIHD 10
GP+F T+HD
Sbjct: 170 GPKFSTLHD 178


>sp|RNZ_HALS3|RIBONUCLEASE Z|Halobacterium salinarum (strain ATCC 29341

Query: 2 GPEFKTIHD 10
GP+F T+HD
Sbjct: 170 GPKFSTLHD 178


>sp|PGMI_AERPE|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Aeropyrum pernix (strain

Query: 2 GPEFKTIHD 10
GPEF+ + D
Sbjct: 58 GPEFRVVKD 66


>sp|TRM56_METST|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosphaera stadtmanae

Query: 1 DGPEFKTIHD 10
DG E KT++D
Sbjct: 147 DGSELKTVYD 156


>sp|AROB_PYRAB|3-DEHYDROQUINATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 DGPEFKTI 8
DG E+KTI
Sbjct: 55 DGEEYKTI 62


>sp|RS4E_METJA|SMALL ribosomal subunit protein eS4|Methanocaldococcus jannaschii (strain

Query: 1 DGPEFKTIHD 10
DG +FKT+ D
Sbjct: 221 DGEKFKTVKD 230


>sp|WECC_PYRHO|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DGPEFKTIH 9
D PEFK+++
Sbjct: 373 DHPEFKSVN 381


>sp|TF2B_SULTO|TRANSCRIPTION initiation factor IIB|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GPEFKTIHD 10
GP +TIHD
Sbjct: 64 GPLNQTIHD 72


>sp|TF2B_SULAC|TRANSCRIPTION initiation factor IIB|Sulfolobus acidocaldarius (strain ATCC

Query: 2 GPEFKTIHD 10
GP +TIHD
Sbjct: 63 GPLNQTIHD 71


>sp|URE3_NATPD|UREASE subunit gamma|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DGPEFKTIHD 10
DG + TIHD
Sbjct: 88 DGTKLVTIHD 97


>sp|SRP54_THEVO|SIGNAL recognition particle 54 kDa|Thermoplasma volcanium (strain ATCC

Query: 2 GPEFKTIHD 10
GPE K I+D
Sbjct: 224 GPESKAIND 232


>sp|TF2B_SACSH|TRANSCRIPTION initiation factor IIB|Saccharolobus shibatae (strain ATCC 51178

Query: 2 GPEFKTIHD 10
GP TIHD
Sbjct: 62 GPLNNTIHD 70


>sp|TF2B1_SACS2|TRANSCRIPTION initiation factor IIB 1|Saccharolobus solfataricus (strain ATCC

Query: 2 GPEFKTIHD 10
GP TIHD
Sbjct: 65 GPLNNTIHD 73


>sp|SOR_ACIAM|SULFUR oxygenase/reductase|Acidianus ambivalens (Desulfurolobus

Query: 3 PEFKTIHD 10
PE + +HD
Sbjct: 271 PELRQVHD 278


>sp|FTTA_THEKO|TRANSCRIPTION termination factor FttA|Thermococcus kodakarensis (strain ATCC

Query: 1 DGPEFKTIHD 10
D PEF+ + D
Sbjct: 233 DAPEFRYVLD 242


>sp|ALAXM_METMA|ALANYL-TRNA editing protein AlaX-M|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DGPEFKTIH 9
DG EFK ++
Sbjct: 54 DGAEFKVVY 62


>sp|RS4E_METVS|SMALL ribosomal subunit protein eS4|Methanococcus vannielii (strain ATCC

Query: 1 DGPEFKTI 8
DG +FKTI
Sbjct: 221 DGEKFKTI 228


>sp|RS4E_METVA|SMALL ribosomal subunit protein eS4|Methanococcus vannielii

Query: 1 DGPEFKTI 8
DG +FKTI
Sbjct: 221 DGEKFKTI 228


>sp|Y1214_METKA|UPF0210 protein MK1214|Methanopyrus kandleri (strain AV19 /

Query: 4 EFKTIHD 10
+F+T+HD
Sbjct: 238 DFRTLHD 244


>sp|MCRZ_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 2 GPEFKTIH 9
G FKT+H
Sbjct: 49 GESFKTVH 56


>sp|G3P_METFE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermus fervidus

Query: 2 GPEFKTIHD 10
GP+ KT+ D
Sbjct: 195 GPDVKTVLD 203




305|Sequence|1521|1530|KTIHDSTKQR

***** No hits found ******


306|Sequence|1526|1535|STKQRLKVSF

>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 2 TKQRLKV 8
TKQRLK+
Sbjct: 1366 TKQRLKI 1372


>sp|Y1537_METJA|UNCHARACTERIZED protein MJ1537|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 STKQRLKVSF 10
ST R+KVSF
Sbjct: 218 STWLRIKVSF 227




307|Sequence|1531|1540|LKVSFASLDL

>sp|MCRX_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 LKVSFASLDL 10
+KV+FA DL
Sbjct: 511 IKVAFADKDL 520


>sp|MCRX_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 LKVSFASLDL 10
+KV+FA DL
Sbjct: 511 IKVAFADKDL 520




308|Sequence|1536|1545|ASLDLVLHLE

>sp|Y1811_METBU|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcoides

Query: 1 ASLDLVLHLE 10
AS+D+VLHLE
Sbjct: 167 ASIDIVLHLE 176


>sp|Y444_METMA|PUTATIVE HTH-type transcriptional regulatory protein|Methanosarcina mazei

Query: 1 ASLDLVLHLE 10
AS+D+VLHLE
Sbjct: 167 ASIDVVLHLE 176


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 2 SLDLVLHL 9
SLDLV+HL
Sbjct: 547 SLDLVMHL 554


>sp|LEUC_METMA|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina mazei

Query: 2 SLDLVLHL 9
S DL+LHL
Sbjct: 174 SKDLILHL 181


>sp|LEUC_METAC|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina

Query: 2 SLDLVLHL 9
S DL+LHL
Sbjct: 174 SKDLILHL 181


>sp|ORNAT_PYRHO|ORNITHINE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LDLVLH 8
LDLVLH
Sbjct: 83 LDLVLH 88




309|Sequence|1541|1550|VLHLEALLSF

>sp|ILVD_IGNH4|DIHYDROXY-ACID dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VLHLEAL 7
VLHLEAL
Sbjct: 270 VLHLEAL 276


>sp|Y636_METJA|UNCHARACTERIZED protein MJ0636|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LHLEALLSF 10
+HLE ++SF
Sbjct: 75 VHLEEIISF 83




310|Sequence|1546|1555|ALLSFMDFLS

>sp|Y075_METJA|UNCHARACTERIZED ATP-binding protein MJ0075|Methanocaldococcus jannaschii (strain

Query: 3 LSFMDFLS 10
L FMDFLS
Sbjct: 226 LKFMDFLS 233


>sp|Y074_METJA|UNCHARACTERIZED ATP-binding protein MJ0074|Methanocaldococcus jannaschii (strain

Query: 3 LSFMDFLS 10
L FMDFL+
Sbjct: 214 LKFMDFLA 221


>sp|LHRC2_THEBM|ATP-DEPENDENT helicase Lhr-Core protein 2|Thermococcus barophilus (strain DSM

Query: 3 LSFMDFLS 10
LSF DF+S
Sbjct: 457 LSFEDFMS 464


>sp|HELS_NATPD|ATP-DEPENDENT DNA helicase Hel308|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ALLSFMD 7
ALLSF+D
Sbjct: 447 ALLSFLD 453


>sp|Y1301_METJA|UNCHARACTERIZED ATP-binding protein MJ1301|Methanocaldococcus jannaschii (strain

Query: 3 LSFMDFLS 10
L FMDFL+
Sbjct: 266 LKFMDFLA 273


>sp|Y439_METJA|UNCHARACTERIZED ATP-binding protein MJ0439|Methanocaldococcus jannaschii (strain

Query: 3 LSFMDFLS 10
L FMDFL+
Sbjct: 226 LKFMDFLA 233


>sp|Y632_METJA|UNCHARACTERIZED ATP-binding protein MJ0632|Methanocaldococcus jannaschii (strain

Query: 3 LSFMDFLS 10
L FMDFL+
Sbjct: 229 LKFMDFLA 236


>sp|Y3515_METJA|UNCHARACTERIZED ATP-binding protein MJECL15|Methanocaldococcus jannaschii (strain

Query: 3 LSFMDFLS 10
L FMDFL+
Sbjct: 229 LKFMDFLA 236


>sp|Y801_METJA|UNCHARACTERIZED ATP-binding protein MJ0801|Methanocaldococcus jannaschii (strain

Query: 3 LSFMDFLS 10
L FMDFL+
Sbjct: 235 LKFMDFLA 242


>sp|Y147_METJA|UNCHARACTERIZED ATP-binding protein MJ0147|Methanocaldococcus jannaschii (strain

Query: 3 LSFMDFLS 10
L FMDFL+
Sbjct: 223 LKFMDFLA 230


>sp|Y1010_METJA|UNCHARACTERIZED ATP-binding protein MJ1010|Methanocaldococcus jannaschii (strain

Query: 3 LSFMDFLS 10
L F+DFLS
Sbjct: 232 LKFIDFLS 239


>sp|Y820_METJA|PUTATIVE uncharacterized protein MJ0820|Methanocaldococcus jannaschii

Query: 3 LSFMDFLS 10
+ FMDFL+
Sbjct: 10 IKFMDFLA 17




311|Sequence|1551|1560|MDFLSSAAPF

>sp|HDRD_METBF|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina barkeri (strain

Query: 2 DFLSSAAPF 10
D LSSA PF
Sbjct: 367 DILSSACPF 375


>sp|BARAC_PYRHO|BROAD substrate specificity amino-acid racemase|Pyrococcus horikoshii

Query: 1 MDFLSSAAPF 10
+DFL+SAA F
Sbjct: 62 IDFLTSAAVF 71


>sp|HDRD_METAC|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina acetivorans

Query: 2 DFLSSAAPF 10
D LSSA PF
Sbjct: 367 DVLSSACPF 375


>sp|HDRD_METTT|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina thermophila

Query: 2 DFLSSAAPF 10
D LSS PF
Sbjct: 367 DILSSCCPF 375


>sp|HDRD_METMA|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina mazei (strain

Query: 2 DFLSSAAPF 10
D LSS PF
Sbjct: 367 DILSSCCPF 375


>sp|DAPB_METHJ|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DFLSSAAP 9
DFLSS P
Sbjct: 53 DFLSSVQP 60




312|Sequence|1556|1565|SAAPFSEPSS

>sp|SYFA_THESM|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus sibiricus (strain DSM 12597

Query: 4 PFSEPS 9
PF+EPS
Sbjct: 425 PFTEPS 430


>sp|SYFA_THEON|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus onnurineus (strain NA1)

Query: 4 PFSEPS 9
PF+EPS
Sbjct: 422 PFTEPS 427


>sp|SYFA_THEKO|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 PFSEPS 9
PF+EPS
Sbjct: 423 PFTEPS 428


>sp|SYFA_THEGJ|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 4 PFSEPS 9
PF+EPS
Sbjct: 421 PFTEPS 426


>sp|SYFA_SULTO|PHENYLALANINE--TRNA ligase alpha subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PFSEPS 9
PF+EPS
Sbjct: 387 PFTEPS 392


>sp|SYFA_SULAC|PHENYLALANINE--TRNA ligase alpha subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 PFSEPS 9
PF+EPS
Sbjct: 387 PFTEPS 392


>sp|SYFA_SACS2|PHENYLALANINE--TRNA ligase alpha subunit|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 PFSEPS 9
PF+EPS
Sbjct: 389 PFTEPS 394


>sp|SYFA_PYRHO|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PFSEPS 9
PF+EPS
Sbjct: 421 PFTEPS 426


>sp|SYFA_PYRFU|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PFSEPS 9
PF+EPS
Sbjct: 421 PFTEPS 426


>sp|SYFA_PYRAB|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus abyssi (strain GE5 /

Query: 4 PFSEPS 9
PF+EPS
Sbjct: 422 PFTEPS 427


>sp|SYFA_METMP|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain DSM 14266

Query: 4 PFSEPS 9
PF+EPS
Sbjct: 422 PFTEPS 427


>sp|SYFA_METM7|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C7 /

Query: 4 PFSEPS 9
PF+EPS
Sbjct: 422 PFTEPS 427


>sp|SYFA_METM5|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C5 /

Query: 4 PFSEPS 9
PF+EPS
Sbjct: 422 PFTEPS 427


>sp|SYFA_METJA|PHENYLALANINE--TRNA ligase alpha subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 4 PFSEPS 9
PF+EPS
Sbjct: 406 PFTEPS 411


>sp|SYFA_METVS|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus vannielii (strain ATCC 35089

Query: 4 PFSEPS 9
PF+EPS
Sbjct: 422 PFTEPS 427


>sp|SYFA_METS5|PHENYLALANINE--TRNA ligase alpha subunit|Metallosphaera sedula (strain ATCC 51363

Query: 4 PFSEPS 9
PF+EPS
Sbjct: 388 PFTEPS 393


>sp|SYFA_AERPE|PHENYLALANINE--TRNA ligase alpha subunit|Aeropyrum pernix (strain ATCC 700893

Query: 4 PFSEPS 9
PF+EPS
Sbjct: 409 PFTEPS 414




313|Sequence|1561|1570|SEPSSSEKES

***** No hits found ******


314|Sequence|1566|1575|SEKESELKPL

>sp|SLAA_SACS2|S-LAYER protein A|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 ESELKPL 10
E+ELKPL
Sbjct: 465 EAELKPL 471


>sp|RS4E_THEKO|SMALL ribosomal subunit protein eS4|Thermococcus kodakarensis (strain

Query: 1 SEKESELKPL 10
SE+E++LKP
Sbjct: 116 SEEEAKLKPF 125


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 EKESELKPL 10
E+E LKPL
Sbjct: 773 EREHNLKPL 781


>sp|RS4E_PYRAB|SMALL ribosomal subunit protein eS4|Pyrococcus abyssi (strain GE5 /

Query: 1 SEKESELKPL 10
SE+E+ +KPL
Sbjct: 116 SEEEANIKPL 125




315|Sequence|1571|1580|ELKPLVGESR

>sp|DHE4_HALSI|NADP-SPECIFIC glutamate dehydrogenase A1|Halobacterium salinarum (Halobacterium

Query: 1 ELKPLVGESR 10
EL+P +GE +
Sbjct: 130 ELRPFIGEDK 139


>sp|DHE4_HALSA|NADP-SPECIFIC glutamate dehydrogenase A1|Halobacterium salinarum (strain ATCC

Query: 1 ELKPLVGESR 10
EL+P +GE +
Sbjct: 130 ELRPFIGEDK 139


>sp|PYRE_PYRAE|OROTATE phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ELKPLVGESR 10
EL+P +GE R
Sbjct: 171 ELRPHIGEER 180


>sp|SAHH_HALWD|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16790

Query: 1 ELKPLVGES 9
E KPL GE+
Sbjct: 49 ETKPLAGET 57


>sp|SAHH_HALWC|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16854

Query: 1 ELKPLVGES 9
E KPL GE+
Sbjct: 49 ETKPLAGET 57


>sp|SYFA_THEON|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus onnurineus (strain NA1)

Query: 1 ELKPLVG 7
ELKP+VG
Sbjct: 101 ELKPIVG 107


>sp|SYFA_PYRFU|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ELKPLVG 7
ELKP+VG
Sbjct: 100 ELKPIVG 106


>sp|SYFA_THEKO|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ELKPLVG 7
ELKP+VG
Sbjct: 101 ELKPIVG 107


>sp|SYFA_THEGJ|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 1 ELKPLVG 7
ELKP+VG
Sbjct: 101 ELKPIVG 107


>sp|Y1807_METBF|PROTEIN Mbar_A1807|Methanosarcina barkeri (strain Fusaro /

Query: 1 ELKPLVGESR 10
EL P+ GE R
Sbjct: 36 ELSPVFGEKR 45


>sp|LEU1_IGNH4|PROBABLE 2-isopropylmalate synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 KPLVGES 9
KP+VGE+
Sbjct: 290 KPIVGEN 296




316|Sequence|1576|1585|VGESRSIAVK

>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 ESRSIAVK 10
ESR++AVK
Sbjct: 769 ESRAVAVK 776


>sp|SYH_HALWD|HISTIDINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VGESRSIAVK 10
VG++RS+A +
Sbjct: 345 VGDTRSVATR 354




317|Sequence|1581|1590|SIAVKAVSSN

***** No hits found ******


318|Sequence|1586|1595|AVSSNISQKD

***** No hits found ******


319|Sequence|1591|1600|ISQKDVFDLK

>sp|FLAB1_THEKO|FLAGELLIN B1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 QKDVFDL 9
Q D+FDL
Sbjct: 136 QNDIFDL 142


>sp|Y1487_METJA|UNCHARACTERIZED methyltransferase MJ1487|Methanocaldococcus jannaschii (strain

Query: 2 SQKDVFDLK 10
++KD+F+LK
Sbjct: 41 NKKDIFNLK 49


>sp|DUT_METBU|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanococcoides

Query: 1 ISQKDVFDLK 10
+ KD FDLK
Sbjct: 131 VHNKDGFDLK 140


>sp|COFE_METAC|COENZYME F420:L-glutamate ligase|Methanosarcina acetivorans (strain ATCC

Query: 1 ISQKDVFD 8
I +KD+FD
Sbjct: 177 IGEKDLFD 184




320|Sequence|1596|1605|VFDLKITAEL

>sp|HIS6_METLZ|IMIDAZOLE glycerol phosphate synthase subunit|Methanocorpusculum labreanum

Query: 2 FDLKITAEL 10
FDL+ITA +
Sbjct: 199 FDLEITAAI 207


>sp|HIS7_METPE|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 FDLKITAE 9
FDL ITA+
Sbjct: 51 FDLNITAK 58


>sp|LEUC1_ARCFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Archaeoglobus fulgidus (strain ATCC

Query: 3 DLKITAEL 10
DLKI AE+
Sbjct: 305 DLKIAAEI 312




321|Sequence|1601|1610|ITAELNAFNV

>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ITAELNAFN 9
+T E+NA+N
Sbjct: 151 VTEEVNAYN 159


>sp|METE_METJA|METHIONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ITAELNAFNV 10
I ELN FNV
Sbjct: 200 IIDELNKFNV 209




322|Sequence|1606|1615|NAFNVFVCDQ

>sp|SYFB_METVS|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus vannielii (strain ATCC 35089

Query: 2 AFNVFVC 8
A N+FVC
Sbjct: 248 ALNIFVC 254


>sp|ATGT_METKA|TRNA-GUANINE(15) transglycosylase|Methanopyrus kandleri (strain AV19 /

Query: 4 NVFVCDQ 10
+VFVCD+
Sbjct: 362 SVFVCDE 368




323|Sequence|1611|1620|FVCDQKCNIA

>sp|PUS10_IGNAA|TRNA pseudouridine synthase Pus10|Ignisphaera aggregans (strain DSM

Query: 1 FVCDQKCN 8
F+CD K N
Sbjct: 94 FICDNKIN 101


>sp|HEM4_ARCFU|PUTATIVE uroporphyrinogen-III synthase|Archaeoglobus fulgidus (strain ATCC

Query: 2 VCDQKC 7
+CD+KC
Sbjct: 174 LCDEKC 179


>sp|ABLA_METMA|L-LYSINE 2,3-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 CDQKCNI 9
C QKC I
Sbjct: 376 CQQKCTI 382


>sp|HEPT_THECF|PROBABLE ribonuclease HepT|Thermococcus cleftensis (strain DSM 27260

Query: 1 FVCDQKCNIA 10
F+CD+K A
Sbjct: 31 FLCDKKTQFA 40


>sp|NIFD_METMP|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 3 CDQKCN 8
C Q+CN
Sbjct: 31 CKQRCN 36


>sp|NIFD_METMI|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 3 CDQKCN 8
C Q+CN
Sbjct: 31 CKQRCN 36


>sp|IF1A_METJA|TRANSLATION initiation factor 1A|Methanocaldococcus jannaschii (strain ATCC

Query: 4 DQKCNI 9
DQKC+I
Sbjct: 75 DQKCDI 80


>sp|IF1A_META3|TRANSLATION initiation factor 1A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 DQKCNI 9
DQKC+I
Sbjct: 77 DQKCDI 82




324|Sequence|1616|1625|KCNIADIKIH

>sp|KCY_STAMF|CYTIDYLATE kinase|Staphylothermus marinus (strain ATCC 43588

Query: 3 NIADIKIH 10
NIADIKI+
Sbjct: 90 NIADIKIY 97


>sp|LONH_METTH|PUTATIVE lon protease homolog|Methanothermobacter thermautotrophicus (strain

Query: 2 CNIADIK 8
CNIAD++
Sbjct: 338 CNIADLQ 344


>sp|EF2_METTE|ELONGATION factor 2|Methanosarcina thermophila

Query: 1 KCNIADIKIH 10
KC + D K+H
Sbjct: 582 KCVLVDAKLH 591


>sp|EF2_METMA|ELONGATION factor 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KCNIADIKIH 10
KC + D K+H
Sbjct: 582 KCVLVDAKLH 591


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 KCNIADIKIH 10
KC + D K+H
Sbjct: 582 KCVLVDAKLH 591


>sp|EF2_METAC|ELONGATION factor 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KCNIADIKIH 10
KC + D K+H
Sbjct: 582 KCVLVDAKLH 591


>sp|EF2_METMJ|ELONGATION factor 2|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KCNIADIK 8
KCN D+K
Sbjct: 229 KCNAGDMK 236


>sp|SYFB_METTP|PHENYLALANINE--TRNA ligase beta subunit|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 KCNIADIKIH 10
KC+++ + IH
Sbjct: 453 KCHLSAVSIH 462


>sp|HYPA_METTH|HYDROGENASE maturation factor HypA|Methanothermobacter thermautotrophicus

Query: 1 KCNIADIKI 9
+CN+ +IKI
Sbjct: 110 ECNVKNIKI 118




325|Sequence|1621|1630|DIKIHGMDAS

>sp|PORC_METTH|PYRUVATE synthase subunit PorC|Methanothermobacter thermautotrophicus

Query: 1 DIKIHGMDAS 10
D+K+H +DA+
Sbjct: 105 DVKVHTIDAT 114


>sp|PURE_METSM|PROBABLE N5-carboxyaminoimidazole ribonucleotide mutase|Methanobrevibacter

Query: 1 DIKIHGMDA 9
D+K+ G+DA
Sbjct: 89 DVKVSGLDA 97


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DIKIHGMDA 9
DI +H +DA
Sbjct: 371 DISVHAVDA 379


>sp|HISX_PICTO|HISTIDINOL dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 1 DIKIHGMDA 9
D++I+G+DA
Sbjct: 13 DVRINGIDA 21


>sp|PGP_SULAC|PHOSPHOGLYCOLATE phosphatase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IKIHGMDAS 10
IK+HG+D +
Sbjct: 158 IKMHGLDKA 166


>sp|FTHS_PICTO|FORMATE--TETRAHYDROFOLATE ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 DIKIHGMDAS 10
D+K+HG AS
Sbjct: 222 DLKVHGAMAS 231


>sp|TRUD_METM5|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain C5

Query: 2 IKIHGMDAS 10
IKI G+D S
Sbjct: 144 IKIRGLDLS 152


>sp|PURE_METTH|PROBABLE N5-carboxyaminoimidazole ribonucleotide

Query: 1 DIKIHGMDA 9
D+K+ G+DA
Sbjct: 89 DVKLGGLDA 97


>sp|ARCC_THEAC|CARBAMATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 KIHGMDA 9
+IHG+DA
Sbjct: 196 QIHGIDA 202




326|Sequence|1626|1635|GMDASISVKP

>sp|Y034_METJA|IRON-SULFUR cluster assembly SufBD family|Methanocaldococcus jannaschii (strain

Query: 1 GMDASISVKP 10
GMD I VKP
Sbjct: 141 GMDGDILVKP 150


>sp|Y444_METMA|PUTATIVE HTH-type transcriptional regulatory protein|Methanosarcina mazei

Query: 1 GMDASISV 8
GMDASI V
Sbjct: 164 GMDASIDV 171


>sp|Y2318_METBF|PUTATIVE HTH-type transcriptional regulatory protein|Methanosarcina barkeri

Query: 1 GMDASISV 8
GMDASI V
Sbjct: 164 GMDASIDV 171


>sp|Y3524_METAC|PUTATIVE HTH-type transcriptional regulatory protein|Methanosarcina

Query: 1 GMDASISV 8
GMDASI V
Sbjct: 164 GMDASIDV 171


>sp|Y2519_HALMA|PUTATIVE HTH-type transcriptional regulatory protein|Haloarcula marismortui

Query: 1 GMDASISV 8
GMDAS+ V
Sbjct: 163 GMDASVEV 170


>sp|IF2P_METS5|PROBABLE translation initiation factor IF-2|Metallosphaera sedula (strain

Query: 1 GMDASISVK 9
GM+ S+S+K
Sbjct: 527 GMEVSMSIK 535




327|Sequence|1631|1640|ISVKPKQTDV

>sp|IORB_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorB|Pyrococcus abyssi (strain GE5 /

Query: 1 ISVKPKQTDV 10
ISV PK DV
Sbjct: 175 ISVPPKAVDV 184


>sp|IORB_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorB|Thermococcus kodakarensis (strain ATCC

Query: 1 ISVKPKQTDV 10
ISV PK DV
Sbjct: 175 ISVPPKTIDV 184


>sp|WTPA_THEKO|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ISVKPKQTDV 10
I ++PK+TD+
Sbjct: 215 IVIRPKETDL 224


>sp|WTPA_PYRFU|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ISVKPKQTDV 10
I ++PK+TD+
Sbjct: 212 IVIRPKETDL 221


>sp|WTPA_PYRAB|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus abyssi (strain GE5 /

Query: 1 ISVKPKQTDV 10
+ ++PK+TD+
Sbjct: 211 VVIRPKETDL 220


>sp|IMDH_METJA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VKPKQTDV 10
V+PK TDV
Sbjct: 27 VEPKDTDV 34




328|Sequence|1636|1645|KQTDVFARLK

>sp|DHYS2_ARCFU|PROBABLE deoxyhypusine synthase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KQTDVFARLK 10
+QT+V ARLK
Sbjct: 214 QQTEVVARLK 223




329|Sequence|1641|1650|FARLKDIIVM

>sp|RPO1C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Archaeoglobus fulgidus (strain ATCC

Query: 1 FARLKDIIVM 10
F +LKD ++M
Sbjct: 207 FDKLKDTVIM 216


>sp|KTHY_METVS|PROBABLE thymidylate kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 FARLKDIIVM 10
FA++ DI+V+
Sbjct: 110 FAKIPDIVVI 119


>sp|TDXH2_SULME|PEROXIREDOXIN 2|Sulfuracidifex metallicus (Sulfolobus metallicus)

Query: 1 FARLKDII 8
FARL DI+
Sbjct: 104 FARLLDIV 111




330|Sequence|1646|1655|DIIVMNVDLQ

>sp|FTSZ2_PYRHO|CELL division protein FtsZ 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DIIVMNVDLQ 10
D+I MN D Q
Sbjct: 61 DLIAMNTDAQ 70


>sp|LEUC1_METKA|3-ISOPROPYLMALATE dehydratase large subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 1 DIIVMNVDL 9
DI+V N+D+
Sbjct: 22 DIVVANIDV 30


>sp|FTSZ2_PYRFU|CELL division protein FtsZ 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DIIVMNVDLQ 10
D+I MN D Q
Sbjct: 61 DLIAMNTDAQ 70


>sp|SYY_METKA|TYROSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 DIIVMNVDL 9
DI+ +NVDL
Sbjct: 165 DIVHLNVDL 173


>sp|FTSZ2_PYRAB|CELL division protein FtsZ 2|Pyrococcus abyssi (strain GE5 /

Query: 1 DIIVMNVDLQ 10
D+I MN D Q
Sbjct: 61 DLIAMNTDAQ 70




331|Sequence|1651|1660|NVDLQSIHKK

>sp|COFG_META3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 VDLQSIHKK 10
VD+ +IHKK
Sbjct: 220 VDINNIHKK 228


>sp|AATE_METMA|A-TYPE ATP synthase subunit E|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DLQSIHKK 10
DLQS+H++
Sbjct: 54 DLQSLHQQ 61


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NVDLQSIHK 9
+VDL IHK
Sbjct: 499 DVDLSDIHK 507




332|Sequence|1656|1665|SIHKKAVSIL

>sp|Y738_ARCFU|UPF0058 protein AF_0738|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 HKKAVSIL 10
HKKA+S+L
Sbjct: 50 HKKAISLL 57


>sp|CH60_METVS|CHAPERONIN GroEL|Methanococcus vannielii (strain ATCC 35089

Query: 4 KKAVSIL 10
KKAVSIL
Sbjct: 124 KKAVSIL 130




333|Sequence|1661|1670|AVSILGDEVF

>sp|RL3_METST|LARGE ribosomal subunit protein uL3|Methanosphaera stadtmanae (strain

Query: 1 AVSILGDEV 9
A+SILG E+
Sbjct: 176 AISILGKEI 184


>sp|SYR_AERPE|ARGININE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 VSILGDEVF 10
V LGDEVF
Sbjct: 94 VEKLGDEVF 102


>sp|TOP6B_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VSILGDEVF 10
V +GDE+F
Sbjct: 2 VGFMGDELF 10


>sp|G3P_METS5|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Metallosphaera sedula (strain ATCC 51363

Query: 1 AVSILGDEVF 10
+VS+ G+EVF
Sbjct: 284 SVSVRGNEVF 293


>sp|ENO2_METHJ|ENOLASE 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 VSILGDEVF 10
+ I+GD++F
Sbjct: 307 IQIVGDDIF 315


>sp|TFE_SACS2|TRANSCRIPTION factor E|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 AVSILGDEV 9
A S+LGD+V
Sbjct: 12 AKSLLGDDV 20


>sp|TFE_SACI7|TRANSCRIPTION factor E|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 AVSILGDEV 9
A S+LGD+V
Sbjct: 12 AKSLLGDDV 20


>sp|TFE_SACI6|TRANSCRIPTION factor E|Saccharolobus islandicus (strain M.16.4 /

Query: 1 AVSILGDEV 9
A S+LGD+V
Sbjct: 12 AKSLLGDDV 20


>sp|TFE_SACI4|TRANSCRIPTION factor E|Saccharolobus islandicus (strain M.14.25 /

Query: 1 AVSILGDEV 9
A S+LGD+V
Sbjct: 12 AKSLLGDDV 20


>sp|TFE_SACI3|TRANSCRIPTION factor E|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 AVSILGDEV 9
A S+LGD+V
Sbjct: 12 AKSLLGDDV 20


>sp|TFE_SACI2|TRANSCRIPTION factor E|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 AVSILGDEV 9
A S+LGD+V
Sbjct: 12 AKSLLGDDV 20


>sp|TFE_SACI1|TRANSCRIPTION factor E|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 AVSILGDEV 9
A S+LGD+V
Sbjct: 12 AKSLLGDDV 20


>sp|ENO_METVS|ENOLASE vannielii (strain ATCC 35089

Query: 1 AVSILGDEVF 10
+ I+GD++F
Sbjct: 307 GIQIIGDDIF 316




334|Sequence|1666|1675|GDEVFRFQLT

>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 1 GDEVFRFQ 8
G+EVFRF+
Sbjct: 252 GNEVFRFK 259


>sp|Y1638_METJA|UNCHARACTERIZED protein MJ1638|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DEVFRFQL 9
DE+FRF L
Sbjct: 180 DEIFRFNL 187


>sp|SYR_AERPE|ARGININE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GDEVFRF 7
GDEVFR
Sbjct: 98 GDEVFRL 104


>sp|SYR_METM7|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 DEVFRFQLT 10
DEVFR L+
Sbjct: 284 DEVFRLDLS 292


>sp|SYR_METM6|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 DEVFRFQLT 10
DEVFR L+
Sbjct: 284 DEVFRLDLS 292


>sp|SYR_METM5|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 DEVFRFQLT 10
DEVFR L+
Sbjct: 284 DEVFRLDLS 292


>sp|DPOL1_METTH|DNA polymerase PolB subunit 1|Methanothermobacter thermautotrophicus

Query: 2 DEVFRFQL 9
DE+FR+ L
Sbjct: 342 DELFRYSL 349




335|Sequence|1671|1680|RFQLTLYPDA

>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 QLTLYPDA 10
+L LYPDA
Sbjct: 785 ELNLYPDA 792


>sp|URED_CENSY|UREASE accessory protein UreD|Cenarchaeum symbiosum (strain A)

Query: 1 RFQLTLYPDA 10
+ Q LYPDA
Sbjct: 38 QVQRALYPDA 47


>sp|GUAA_PYRAE|GMP synthase [glutamine-hydrolyzing]|Pyrobaculum aerophilum (strain

Query: 3 QLTLYPD 9
Q TLYPD
Sbjct: 316 QGTLYPD 322


>sp|Y3507_METJA|UNCHARACTERIZED protein MJECL07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LTLYPD 9
LT+YPD
Sbjct: 143 LTVYPD 148


>sp|Y303_ARCFU|UNCHARACTERIZED protein AF_0303|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RFQLTLYPD 9
RF + L+PD
Sbjct: 305 RFSIALHPD 313


>sp|Y1612_HALMA|UNCHARACTERIZED protein rrnAC1612|Haloarcula marismortui (strain ATCC 43049

Query: 3 QLTLYPD 9
+LT+YPD
Sbjct: 39 RLTVYPD 45




336|Sequence|1676|1685|LYPDATEGEA

>sp|FAU1_PYRHO|PROBABLE ribonuclease FAU-1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PDATEGE 9
PDATEG+
Sbjct: 124 PDATEGD 130


>sp|HIS1_METKA|ATP phosphoribosyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 3 PDATEGEA 10
PDAT+GE
Sbjct: 186 PDATDGEV 193


>sp|SYE_METKA|GLUTAMATE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 LYPDATEGE 9
L+PD EGE
Sbjct: 432 LHPDRDEGE 440


>sp|KPTA_THEON|PROBABLE RNA 2'-phosphotransferase|Thermococcus onnurineus (strain NA1)

Query: 1 LYPDATE 7
+YPD TE
Sbjct: 45 IYPDVTE 51


>sp|PUR2_METKA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 YPDATEGEA 10
YP+++EGE
Sbjct: 349 YPESSEGEG 357


>sp|LEU1_ARCFU|PROBABLE 2-isopropylmalate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 2 YPDATEGE 9
+P AT+GE
Sbjct: 50 FPSATKGE 57


>sp|SYFB_METBU|PHENYLALANINE--TRNA ligase beta subunit|Methanococcoides burtonii (strain DSM 6242

Query: 1 LYPDATE 7
+YPD TE
Sbjct: 258 VYPDGTE 264


>sp|Y1402_METJA|UNCHARACTERIZED protein MJ1402|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LYPDAT 6
+YPDAT
Sbjct: 172 IYPDAT 177


>sp|FAU1_PYRAB|PROBABLE ribonuclease FAU-1|Pyrococcus abyssi (strain GE5 /

Query: 3 PDATEGE 9
PDA EG+
Sbjct: 124 PDAVEGD 130


>sp|Y583_METTM|PUTATIVE ABC transporter ATP-binding protein|Methanothermobacter

Query: 2 YPDATE 7
YPD TE
Sbjct: 13 YPDGTE 18


>sp|ECFA_METST|ENERGY-COUPLING factor transporter ATP-binding protein|Methanosphaera stadtmanae

Query: 2 YPDATE 7
YPD TE
Sbjct: 14 YPDGTE 19


>sp|Y484_METMA|PROTEIN MM_0484|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 YPDATEGEA 10
YPD+T EA
Sbjct: 65 YPDSTLKEA 73


>sp|FAU1_PYRFU|PROBABLE ribonuclease FAU-1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PDATEGE 9
PDA EG+
Sbjct: 124 PDAAEGD 130




337|Sequence|1681|1690|TEGEAYADMS

>sp|Y796_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 TEGEAYAD 8
TEGE Y D
Sbjct: 58 TEGEVYID 65


>sp|RS12_THEPD|SMALL ribosomal subunit protein uS12|Thermofilum pendens (strain DSM 2475

Query: 2 EGEAYADM 9
EG AY D+
Sbjct: 112 EGRAYGDL 119


>sp|LMRAC_THELN|LEUCINE/METHIONINE racemase|Thermococcus litoralis (strain ATCC 51850

Query: 2 EGEAYAD 8
EGE YAD
Sbjct: 197 EGEVYAD 203


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain ATCC

Query: 2 EGEAYADMS 10
EGE+Y D S
Sbjct: 265 EGESYVDES 273


>sp|PDXS_HALWD|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Haloquadratum walsbyi (strain

Query: 2 EGEAYADMS 10
+GEA AD+S
Sbjct: 284 KGEANADLS 292


>sp|ARLY_SULAC|ARGININOSUCCINATE lyase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GEAYADMS 10
GE Y D+S
Sbjct: 286 GECYGDLS 293




338|Sequence|1686|1695|YADMSKVDGK

>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YADMSKVDGK 10
Y DM K DGK
Sbjct: 735 YIDMCKADGK 744


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 3 DMSKVDGK 10
D+S+VDGK
Sbjct: 889 DVSRVDGK 896


>sp|DNLJ_HALWD|DNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 ADMSKVDG 9
AD+SK+DG
Sbjct: 549 ADLSKLDG 556


>sp|Y666_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0666|Methanocaldococcus

Query: 3 DMSKVDGK 10
D+SK+DGK
Sbjct: 201 DISKLDGK 208


>sp|TF2B1_THEKO|TRANSCRIPTION initiation factor IIB 1|Thermococcus kodakarensis (strain ATCC

Query: 2 ADMSKVDGK 10
AD+S+VD K
Sbjct: 176 ADVSRVDKK 184


>sp|DTDA_HALSA|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 700922

Query: 1 YADMSKVDGK 10
YA +S+ DG+
Sbjct: 368 YASVSRADGE 377


>sp|DTDA_HALS3|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 29341

Query: 1 YADMSKVDGK 10
YA +S+ DG+
Sbjct: 368 YASVSRADGE 377


>sp|SYK_THEAC|LYSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YADMSKVDGK 10
+AD+ K +GK
Sbjct: 198 FADIRKAEGK 207




339|Sequence|1691|1700|KVDGKLSFKV

>sp|PSTB3_NATPD|PHOSPHATE import ATP-binding protein PstB|Natronomonas pharaonis (strain

Query: 1 KVDGKLSFK 9
+VDGK+ FK
Sbjct: 87 RVDGKVVFK 95


>sp|Y2387_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 KVDGKLSFK 9
K++G LSFK
Sbjct: 60 KIEGNLSFK 68


>sp|Y1610_METJA|UNCHARACTERIZED glycosyl hydrolase MJ1610|Methanocaldococcus jannaschii (strain

Query: 1 KVDGKLSFKV 10
K+D KL+FK+
Sbjct: 103 KLDKKLNFKL 112


>sp|TRUA_METMP|TRNA pseudouridine synthase A|Methanococcus maripaludis (strain DSM

Query: 3 DGKLSFK 9
DGKLSF+
Sbjct: 9 DGKLSFQ 15


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KVDGKLSFK 9
KV+G L FK
Sbjct: 95 KVEGVLGFK 103


>sp|HERA_SULTO|DNA double-strand break repair helicase|Sulfurisphaera tokodaii

Query: 1 KVDGKLS 7
K+DGKLS
Sbjct: 85 KLDGKLS 91


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KVDGKLSFK 9
KV+G L FK
Sbjct: 95 KVEGVLGFK 103




340|Sequence|1696|1705|LSFKVGCIQI

>sp|TFRA_METTM|FUMARATE reductase (CoM/CoB) subunit A|Methanothermobacter marburgensis

Query: 1 LSFKVGC 7
LSFK GC
Sbjct: 40 LSFKSGC 46


>sp|RL21_PICTO|LARGE ribosomal subunit protein eL21|Picrophilus torridus (strain ATCC

Query: 1 LSFKVGCIQ 9
LSFKVG ++
Sbjct: 75 LSFKVGNVE 83


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LSFKVGCIQI 10
LSF+ GC I
Sbjct: 438 LSFERGCASI 447


>sp|SYR_METST|ARGININE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LSFKVGCIQI 10
LSF+ GC I
Sbjct: 438 LSFERGCASI 447


>sp|SYR_METS3|ARGININE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LSFKVGCIQI 10
LSF+ GC I
Sbjct: 452 LSFERGCASI 461




341|Sequence|1701|1710|GCIQIVYVHK

>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GCIQIVYVH 9
GC I Y H
Sbjct: 443 GCASIQYAH 451


>sp|SYR_METST|ARGININE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GCIQIVYVH 9
GC I Y H
Sbjct: 443 GCASIQYAH 451


>sp|SYR_METS3|ARGININE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GCIQIVYVH 9
GC I Y H
Sbjct: 457 GCASIQYAH 465


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GCIQIVYVHK 10
G +++Y HK
Sbjct: 565 GVYRVIYTHK 574


>sp|Y392_METJA|ZINC metalloprotease MJ0392|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GCIQIVYVHK 10
GCI I +HK
Sbjct: 264 GCIGIGNIHK 273




342|Sequence|1706|1715|VYVHKFFMSL

>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 HKFFMS 9
HKFF+S
Sbjct: 421 HKFFLS 426


>sp|PDXT_THEVO|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Thermoplasma volcanium (strain

Query: 1 VYVHKFFMSL 10
V +H++F+S+
Sbjct: 179 VSIHEYFLSM 188


>sp|NADA_METTH|QUINOLINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 YVHKFFMS 9
YVHK F +
Sbjct: 174 YVHKMFTA 181


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 4 HKFFMS 9
HKFF+S
Sbjct: 794 HKFFIS 799


>sp|PDXT_ARCFU|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Archaeoglobus fulgidus (strain

Query: 3 VHKFFMSL 10
+H+FF+ L
Sbjct: 187 IHEFFLKL 194




343|Sequence|1711|1720|FFMSLLNFLN

>sp|GGGPS_METTH|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 FFMSLLNFLN 10
FFMSLLN N
Sbjct: 91 FFMSLLNSTN 100


>sp|GGGPS_THESM|GERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus sibiricus (strain DSM 12597

Query: 1 FFMSLLNFLN 10
FFMSLLN N
Sbjct: 96 FFMSLLNSRN 105


>sp|GGGPS_THEKO|GERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FFMSLLNFLN 10
FFMSLLN N
Sbjct: 96 FFMSLLNSRN 105


>sp|GGGPS_THEGJ|GERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 FFMSLLNFLN 10
FFMSLLN N
Sbjct: 96 FFMSLLNSRN 105


>sp|GGGPS_PYRHO|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FFMSLLNFLN 10
FFMSLLN N
Sbjct: 98 FFMSLLNSRN 107


>sp|GGGPS_PYRFU|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FFMSLLNFLN 10
FFMSLLN N
Sbjct: 95 FFMSLLNSRN 104


>sp|GGGPS_PYRAB|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 FFMSLLNFLN 10
FFMSLLN N
Sbjct: 97 FFMSLLNSRN 106


>sp|GGGPS_THEAC|GERANYLGERANYLGLYCERYL phosphate synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FFMSLLN 7
FFMSLLN
Sbjct: 93 FFMSLLN 99


>sp|GGGPS_METTP|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 FFMSLLN 7
FFMSLLN
Sbjct: 101 FFMSLLN 107


>sp|GGGPS_METTM|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter marburgensis (strain ATCC

Query: 1 FFMSLLN 7
FFMSLLN
Sbjct: 91 FFMSLLN 97


>sp|GGGPS_METMA|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FFMSLLN 7
FFMSLLN
Sbjct: 93 FFMSLLN 99


>sp|GGGPS_METBU|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 FFMSLLN 7
FFMSLLN
Sbjct: 93 FFMSLLN 99


>sp|GGGPS_METBF|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 FFMSLLN 7
FFMSLLN
Sbjct: 93 FFMSLLN 99


>sp|GGGPS_METAC|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FFMSLLN 7
FFMSLLN
Sbjct: 93 FFMSLLN 99


>sp|GGGPS_THEVO|GERANYLGERANYLGLYCERYL phosphate synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FFMSLLN 7
FFMSLLN
Sbjct: 92 FFMSLLN 98


>sp|GGGPS_METMP|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FFMSLLNFLN 10
FFMSL+N N
Sbjct: 92 FFMSLMNSKN 101


>sp|GGGPS_METJA|GERANYLGERANYLGLYCERYL phosphate synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FFMSLLNFLN 10
F+MSL+N N
Sbjct: 92 FYMSLMNSAN 101


>sp|GGGPS_METST|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 FFMSLLNFLN 10
FMSLLN N
Sbjct: 91 LFMSLLNSTN 100


>sp|GGGPS_KORCO|GERANYLGERANYLGLYCERYL phosphate synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 FFMSLLNFLN 10
FMSLLN N
Sbjct: 89 LFMSLLNSTN 98


>sp|GGGPS_IGNH4|GERANYLGERANYLGLYCERYL phosphate synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 FFMSLLNFLN 10
FMSLLN N
Sbjct: 91 LFMSLLNSTN 100


>sp|GGGPS_METKA|GERANYLGERANYLGLYCERYL phosphate synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 FFMSLLNFLN 10
FMSLLN N
Sbjct: 88 LFMSLLNSRN 97


>sp|SYK_SULAC|LYSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 FMSLLNFLN 10
FMS +N+LN
Sbjct: 212 FMSHVNYLN 220


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 MSLLNFLN 10
MSL NF N
Sbjct: 1 MSLANFFN 8


>sp|RNJL_METJA|RNASE J-like protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FMSLLNFLN 10
+MS +N+LN
Sbjct: 256 YMSYINWLN 264




344|Sequence|1716|1725|LNFLNNFQTA

>sp|SYC_SACS2|CYSTEINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LNFLNNFQTA 10
LN LNNF TA
Sbjct: 350 LNNLNNFHTA 359


>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LNFLNNF 7
L+FLNNF
Sbjct: 5 LDFLNNF 11


>sp|GLMS_METAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina acetivorans (strain

Query: 3 FLNNFQTA 10
F+N+F+TA
Sbjct: 214 FVNDFETA 221


>sp|SYH_PYRAB|HISTIDINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 FLNNFQTA 10
++N+FQTA
Sbjct: 86 YVNSFQTA 93




345|Sequence|1721|1730|NFQTAKEALS

>sp|RL10E_METKA|LARGE ribosomal subunit protein uL16|Methanopyrus kandleri (strain AV19 /

Query: 1 NFQTAKEAL 9
NF+ AKEAL
Sbjct: 141 NFEHAKEAL 149


>sp|RL10E_METAC|LARGE ribosomal subunit protein uL16|Methanosarcina acetivorans (strain

Query: 1 NFQTAKEAL 9
NF+ AKEAL
Sbjct: 142 NFKAAKEAL 150


>sp|RL10E_METTH|LARGE ribosomal subunit protein uL16|Methanothermobacter

Query: 1 NFQTAKEAL 9
NF+ AKEAL
Sbjct: 129 NFKDAKEAL 137


>sp|RL10E_METAR|LARGE ribosomal subunit protein uL16|Methanocella arvoryzae (strain DSM

Query: 1 NFQTAKEAL 9
NF+ AKEA+
Sbjct: 141 NFEKAKEAM 149


>sp|FKBPL_METJA|LONG-TYPE peptidyl-prolyl cis-trans isomerase|Methanocaldococcus jannaschii

Query: 1 NFQTAKEALS 10
N QTAK A++
Sbjct: 192 NIQTAKMAIA 201




346|Sequence|1726|1735|KEALSTATVQ

>sp|T1214_ARCFU|PROBABLE transposase for insertion sequence|Archaeoglobus fulgidus (strain

Query: 1 KEALSTATVQ 10
+EA+S TVQ
Sbjct: 58 REAISVITVQ 67




347|Sequence|1731|1740|TATVQAAERA

***** No hits found ******


348|Sequence|1736|1745|AAERAASSMK

***** No hits found ******


349|Sequence|1741|1750|ASSMKDLAQK

>sp|ACYP_PYRCJ|ACYLPHOSPHATASE calidifontis (strain DSM 21063

Query: 3 SMKDLAQK 10
SMKD+A K
Sbjct: 37 SMKDVANK 44




350|Sequence|1746|1755|DLAQKSFRLL

>sp|TIAS_IGNH4|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignicoccus hospitalis (strain

Query: 2 LAQKSFRLL 10
LA K FR+L
Sbjct: 27 LASKGFRML 35


>sp|Y1429_THEAC|UPF0159 protein Ta1429|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LAQKSFR 8
LAQKS+R
Sbjct: 168 LAQKSYR 174




351|Sequence|1751|1760|SFRLLMDINL

>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 SFRLLMDI 8
SF+L MDI
Sbjct: 83 SFKLFMDI 90


>sp|COFC_NATPD|2-PHOSPHO-L-LACTATE guanylyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SFRLLMDIN 9
SFRL +DI+
Sbjct: 153 SFRLAVDID 161


>sp|COFC_METPE|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 SFRLLMDIN 9
SFRL +DI+
Sbjct: 160 SFRLYVDID 168




352|Sequence|1756|1765|MDINLKAPVI

>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 2 DINLKAPVI 10
D+N++AP+I
Sbjct: 135 DVNVEAPII 143


>sp|QUEC_METST|7-CYANO-7-DEAZAGUANINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 DINLKAPVI 10
DI +KAP+I
Sbjct: 160 DIEIKAPLI 168


>sp|RLME_METM7|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 2 DINLKAPVI 10
DIN K+P++
Sbjct: 209 DINSKSPIV 217


>sp|PSTB_METTH|PHOSPHATE import ATP-binding protein PstB|Methanothermobacter

Query: 2 DINLKAP 8
DINLK P
Sbjct: 24 DINLKIP 30


>sp|TF2B_AERPE|TRANSCRIPTION initiation factor IIB|Aeropyrum pernix (strain ATCC 700893

Query: 2 DINLKAPV 9
D+N+K PV
Sbjct: 212 DLNIKIPV 219


>sp|RLME_METM6|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 2 DINLKAPVI 10
D+N K+P++
Sbjct: 209 DLNSKSPIV 217


>sp|RS2_METB6|SMALL ribosomal subunit protein uS2|Methanoregula boonei (strain DSM

Query: 1 MDINLKAPVI 10
M+I LK P+I
Sbjct: 7 MEIELKEPLI 16


>sp|RLME_METM5|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 1 MDINLKAPVI 10
D+N K+P++
Sbjct: 208 FDMNSKSPIV 217




353|Sequence|1761|1770|KAPVIIIPQS

>sp|G1PDH_PYRAR|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 KAPVIIIPQS 10
+AP+I+IP S
Sbjct: 98 RAPLIVIPTS 107


>sp|MFNA_METAC|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina acetivorans

Query: 2 APVIIIPQS 10
AP I+IP+S
Sbjct: 126 APNIVIPES 134


>sp|THS_METJA|THERMOSOME subunit|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 APVIIIPQS 10
AP++++PQ+
Sbjct: 6 APIVVLPQN 14


>sp|Y1861_PYRAE|PUTATIVE ankyrin repeat protein PAE1861|Pyrobaculum aerophilum (strain

Query: 1 KAPVIIIPQS 10
K P+II QS
Sbjct: 69 KTPIIIATQS 78


>sp|G1PDH_PYRNV|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 KAPVIIIPQS 10
K P+I++P S
Sbjct: 98 KRPLIVVPTS 107


>sp|Y1552_ARCFU|UNCHARACTERIZED transporter AF_1552|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 APVIIIPQS 10
APV +IP S
Sbjct: 98 APVYVIPLS 106


>sp|RF1_AERPE|PEPTIDE chain release factor subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 APVIIIPQS 10
A VI++P+S
Sbjct: 340 AQVIVVPES 348


>sp|G1PDH_PYRIL|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum islandicum (strain DSM 4184

Query: 1 KAPVIIIPQS 10
K P++I+P S
Sbjct: 98 KKPLVIVPTS 107




354|Sequence|1766|1775|IIPQSSVSPN

>sp|CDC6Z_METTF|ORC1-TYPE DNA replication protein|Methanothermobacter thermautotrophicus

Query: 1 IIPQSSVSPN 10
++P SS+ P+
Sbjct: 345 VVPSSSIDPD 354


>sp|CDC6V_METTF|ORC1-TYPE DNA replication protein|Methanothermobacter thermautotrophicus

Query: 1 IIPQSSVSP 9
++P SS+ P
Sbjct: 345 VVPSSSIDP 353


>sp|QOX1_SULAC|QUINOL oxidase subunit 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IIPQSSVSP 9
++P++S++P
Sbjct: 353 VLPENSINP 361




355|Sequence|1771|1780|SVSPNAVIAD

>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 1 SVSPNAVIA 9
SV+P+AVIA
Sbjct: 795 SVNPDAVIA 803


>sp|SYR_KORCO|ARGININE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 SVSPNAVI 8
SVSPN V+
Sbjct: 492 SVSPNKVV 499


>sp|GCST_AERPE|PROBABLE aminomethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 VSPNAVIAD 10
+ PNA +AD
Sbjct: 112 IVPNAAVAD 120


>sp|NNRE_CENSY|NAD(P)H-HYDRATE epimerase|Cenarchaeum symbiosum (strain A)

Query: 1 SVSPNAVI 8
SVSP+A+I
Sbjct: 114 SVSPDAII 121




356|Sequence|1776|1785|AVIADLGLIR

>sp|KAD6_METBF|PUTATIVE adenylate kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 AVIADLGLIR 10
AVIAD+ L+R
Sbjct: 50 AVIADMELVR 59


>sp|KAD6_METMA|PUTATIVE adenylate kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AVIADLGLIR 10
+VIAD+ LIR
Sbjct: 50 SVIADMELIR 59


>sp|G1PDH_ARCFU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AVIADLGLIR 10
AVIADL +I+
Sbjct: 145 AVIADLNIIK 154


>sp|G1PDH_META3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus aeolicus (strain ATCC

Query: 1 AVIADLGLIR 10
A+IADL +I+
Sbjct: 129 AIIADLNIIK 138


>sp|CARA_METMA|CARBAMOYL phosphate synthase small chain|Methanosarcina mazei (strain ATCC

Query: 1 AVIADLGLIR 10
AV+ DLG+ R
Sbjct: 183 AVVVDLGIKR 192


>sp|CARA_METAC|CARBAMOYL phosphate synthase small chain|Methanosarcina acetivorans (strain

Query: 1 AVIADLGLIR 10
AV+ DLG+ R
Sbjct: 183 AVVVDLGIKR 192


>sp|Y1129_METJA|UNCHARACTERIZED protein MJ1129|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IADLGLIR 10
I D+GLIR
Sbjct: 23 IVDMGLIR 30


>sp|KAD6_METAC|PUTATIVE adenylate kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 AVIADLGLIR 10
+V+AD+ L+R
Sbjct: 50 SVVADMELVR 59


>sp|PELO_METTH|PROTEIN pelota homolog|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 IADLGLIR 10
+A+LGLIR
Sbjct: 146 VAELGLIR 153


>sp|G1PDH_HALSA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Halobacterium salinarum (strain ATCC 700922

Query: 1 AVIADLGLI 9
AVIAD G+I
Sbjct: 150 AVIADTGVI 158


>sp|G1PDH_HALS3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Halobacterium salinarum (strain ATCC 29341

Query: 1 AVIADLGLI 9
AVIAD G+I
Sbjct: 150 AVIADTGVI 158


>sp|RBL_THEKO|RIBULOSE bisphosphate carboxylase|Thermococcus kodakarensis (strain ATCC

Query: 2 VIADLGL 8
V+ADLGL
Sbjct: 243 VLADLGL 249


>sp|RPO10_PYRAR|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrobaculum arsenaticum (strain DSM

Query: 2 VIADLGLIR 10
V+ DLGL+R
Sbjct: 34 VLDDLGLVR 42


>sp|G1PDH_METHJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 AVIADLGLI 9
AV+AD G+I
Sbjct: 159 AVVADTGII 167


>sp|G1PDH_THESM|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus sibiricus (strain DSM 12597

Query: 1 AVIADLGLIR 10
AVIAD+ +I+
Sbjct: 149 AVIADVNIIK 158


>sp|COFC_METTP|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 VIADLGLIR 10
V+ADL LIR
Sbjct: 100 VMADLPLIR 108


>sp|G1PDH_METTP|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothrix thermoacetophila (strain DSM

Query: 1 AVIADLGLI 9
A+IAD G+I
Sbjct: 154 AIIADTGII 162




357|Sequence|1781|1790|LGLIRVENKF

>sp|CDC45_SULAC|CELL division control protein 45|Sulfolobus acidocaldarius (strain ATCC

Query: 2 GLIRVENK 9
GLI+VENK
Sbjct: 335 GLIKVENK 342


>sp|PURP_METAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanocella arvoryzae (strain DSM

Query: 1 LGLIRVENKF 10
+GL R+EN F
Sbjct: 103 VGLDRIENDF 112


>sp|PYRI_NITMS|ASPARTATE carbamoyltransferase regulatory chain|Nitrosopumilus maritimus

Query: 3 LIRVENKF 10
+I+VENKF
Sbjct: 58 IIKVENKF 65


>sp|NEP1_THESM|RIBOSOMAL RNA small subunit methyltransferase|Thermococcus sibiricus (strain

Query: 1 LGLIRVENK 9
L L+R+ENK
Sbjct: 126 LALLRIENK 134


>sp|AMZA_METJA|ARCHAEMETZINCIN jannaschii (strain ATCC 43067

Query: 1 LGLIRVENK 9
LGLI ENK
Sbjct: 134 LGLIHCENK 142


>sp|RPO3_METKA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanopyrus kandleri (strain AV19 /

Query: 2 GLIRVEN 8
G+IR+EN
Sbjct: 191 GIIRIEN 197


>sp|SYE_SULTO|GLUTAMATE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LGLIRVENK 9
G +RV+NK
Sbjct: 546 FGFVRVDNK 554


>sp|PYRI_CENSY|ASPARTATE carbamoyltransferase regulatory chain|Cenarchaeum symbiosum

Query: 3 LIRVENKF 10
+I+VEN+F
Sbjct: 58 IIKVENRF 65


>sp|LYSJ_SULAC|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfolobus

Query: 2 GLIRVENK 9
GL+++ENK
Sbjct: 376 GLLKIENK 383


>sp|AATE_THEGJ|A-TYPE ATP synthase subunit E|Thermococcus gammatolerans (strain DSM 15229

Query: 2 GLIRVENKF 10
G +RV+N F
Sbjct: 168 GTVRVDNTF 176


>sp|AATE_DESSY|A-TYPE ATP synthase subunit E|Desulfurococcus sp. (strain SY)

Query: 2 GLIRVENKF 10
G +RV+N F
Sbjct: 174 GTVRVDNTF 182




358|Sequence|1786|1795|VENKFSLVPM

>sp|LHRC_METJA|ATP-DEPENDENT helicase Lhr-Core|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ENKFSLVP 9
+NKF++VP
Sbjct: 614 QNKFAIVP 621


>sp|T1SH_METJA|TYPE I restriction enzyme MjaIX|Methanocaldococcus jannaschii (strain

Query: 1 VENKFSLVP 9
+ENK+ ++P
Sbjct: 374 IENKYIIIP 382


>sp|PSTK_METMP|L-SERYL-TRNA(SEC) kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VENKFSLV 8
+ENKFS++
Sbjct: 66 LENKFSVI 73


>sp|ABLA_METMP|L-LYSINE 2,3-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VENKFSLVP 9
V+N SL+P
Sbjct: 414 VDNSISLIP 422




359|Sequence|1791|1800|SLVPMEHYSL

>sp|RS2_METAR|SMALL ribosomal subunit protein uS2|Methanocella arvoryzae (strain DSM

Query: 1 SLVPMEHY 8
SL+PM+ Y
Sbjct: 17 SLIPMDEY 24


>sp|DHYS_SULTO|PROBABLE deoxyhypusine synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LVPMEHY 8
LVPME Y
Sbjct: 129 LVPMESY 135


>sp|UVRB_HALMA|UVRABC system protein B|Haloarcula marismortui (strain ATCC 43049

Query: 2 LVPMEHYSL 10
L P EHYS+
Sbjct: 256 LHPAEHYSI 264


>sp|MDH_METTH|MALATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 VPMEHYS 9
+P+EHY+
Sbjct: 193 IPIEHYA 199


>sp|MDH_METTM|MALATE dehydrogenase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 3 VPMEHYS 9
+P+EHY+
Sbjct: 193 IPIEHYA 199


>sp|COFG_METM5|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C5 /

Query: 2 LVPMEHY 8
L+PME+Y
Sbjct: 240 LIPMENY 246


>sp|ADEC_METBF|ADENINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 4 PMEHYSL 10
P+EHY L
Sbjct: 282 PVEHYGL 288


>sp|ADEC_METAC|ADENINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 PMEHYSL 10
P+EHY L
Sbjct: 282 PVEHYGL 288


>sp|UVRB_HALSA|UVRABC system protein B|Halobacterium salinarum (strain ATCC 700922

Query: 4 PMEHYSL 10
P EHYS+
Sbjct: 258 PAEHYSV 264


>sp|ADEC_METMA|ADENINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 PMEHYSL 10
P+EHY L
Sbjct: 282 PVEHYGL 288


>sp|THIC_SULAC|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LVPMEHYSL 10
L P EH SL
Sbjct: 327 LTPAEHLSL 335


>sp|ADEC_METTH|ADENINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 SLVPMEHYSL 10
++ P EHY L
Sbjct: 271 TINPAEHYGL 280


>sp|THIC_SULTO|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LVPMEHYSL 10
L P EH SL
Sbjct: 327 LTPAEHLSL 335


>sp|SYY_THEGJ|TYROSINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 VPMEHY 8
+PM+HY
Sbjct: 32 IPMQHY 37


>sp|UVRB_NATPD|UVRABC system protein B|Natronomonas pharaonis (strain ATCC 35678

Query: 4 PMEHYSL 10
P EHYS+
Sbjct: 257 PAEHYSV 263


>sp|ADEC_METST|ADENINE deaminase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 SLVPMEHYSL 10
++ P EHY+L
Sbjct: 272 TINPAEHYNL 281


>sp|Y1452_METJA|UNCHARACTERIZED protein MJ1452|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VPMEHYSL 10
VP HYSL
Sbjct: 7 VPQWHYSL 14


>sp|RS2_METS5|SMALL ribosomal subunit protein uS2|Metallosphaera sedula (strain ATCC

Query: 2 LVPMEHY 8
LVP+E+Y
Sbjct: 30 LVPLENY 36


>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 2 LVPMEH 7
LVP+EH
Sbjct: 3 LVPLEH 8




360|Sequence|1796|1805|EHYSLPPVID

>sp|RNH2_THESM|RIBONUCLEASE HII|Thermococcus sibiricus (strain DSM 12597

Query: 1 EHYSLPPVI 9
EH S PPV+
Sbjct: 186 EHGSFPPVV 194


>sp|Y280_METAC|UNCHARACTERIZED solute-binding protein MA_0280|Methanosarcina acetivorans (strain

Query: 1 EHYSLPPVID 10
E+ +LPP ID
Sbjct: 255 EYVALPPAID 264


>sp|KHSE_METAR|HOMOSERINE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 EHYSLPPV 8
EH LPP+
Sbjct: 151 EHVELPPM 158


>sp|RL22_METKA|LARGE ribosomal subunit protein uL22|Methanopyrus kandleri (strain AV19

Query: 2 HYSLPP 7
HYS+PP
Sbjct: 8 HYSIPP 13


>sp|AROB_SULAC|3-DEHYDROQUINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 HYSLPPVID 10
HY+LP ID
Sbjct: 289 HYNLPISID 297


>sp|PNPH_ARCFU|PROBABLE 6-oxopurine nucleoside phosphorylase|Archaeoglobus fulgidus

Query: 1 EHYSLPPVI 9
E YSLP +I
Sbjct: 88 EEYSLPSLI 96


>sp|CDC61_METAC|ORC1-TYPE DNA replication protein 1|Methanosarcina acetivorans (strain ATCC

Query: 1 EHYSLPPVID 10
E Y L P++D
Sbjct: 394 EDYRLKPLVD 403


>sp|SYFB_METMP|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 EHYSLPPVID 10
E SLPP+I+
Sbjct: 211 EVLSLPPIIN 220


>sp|UVRB_HALMA|UVRABC system protein B|Haloarcula marismortui (strain ATCC 43049

Query: 1 EHYSLP 6
EHYS+P
Sbjct: 260 EHYSIP 265


>sp|CDC61_METMA|ORC1-TYPE DNA replication protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EHYSLPPVID 10
E Y L P++D
Sbjct: 394 EDYRLKPLVD 403


>sp|CBIA_METAC|COBYRINATE a,c-diamide synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EHYSLPPVI 9
EHY+ PVI
Sbjct: 182 EHYTGVPVI 190


>sp|SYFB_METM7|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C7 /

Query: 1 EHYSLPPVID 10
E SLPP+I+
Sbjct: 211 EVLSLPPIIN 220


>sp|RNH2_PYRFU|RIBONUCLEASE HII|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EHYSLPPVI 9
+H S PP++
Sbjct: 186 KHNSFPPIV 194


>sp|SYFB_SULTO|PHENYLALANINE--TRNA ligase beta subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 SLPPVID 10
SLPPVI+
Sbjct: 203 SLPPVIN 209


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EHYSLPPVI 9
E Y+LP VI
Sbjct: 313 EKYNLPSVI 321


>sp|THIC_ARCFU|PHOSPHOMETHYLPYRIMIDINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EHYSLPPVID 10
EH +LP V D
Sbjct: 328 EHLALPTVED 337


>sp|SYFB_HALLT|PHENYLALANINE--TRNA ligase beta subunit|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 YSLPPVID 10
+S PPVI+
Sbjct: 216 FSFPPVIN 223


>sp|UVRB_HALSA|UVRABC system protein B|Halobacterium salinarum (strain ATCC 700922

Query: 1 EHYSLP 6
EHYS+P
Sbjct: 260 EHYSVP 265


>sp|THIC_PYRAE|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EHYSLPPV 8
EH SLP V
Sbjct: 333 EHLSLPTV 340


>sp|SYFB_HALMA|PHENYLALANINE--TRNA ligase beta subunit|Haloarcula marismortui (strain ATCC 43049

Query: 3 YSLPPVID 10
+S PPVI+
Sbjct: 215 FSFPPVIN 222


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EHYSLPPVI 9
EH PP+I
Sbjct: 68 EHLKTPPLI 76


>sp|THIC_SULTO|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EHYSLPPV 8
EH SLP V
Sbjct: 331 EHLSLPTV 338


>sp|UVRB_NATPD|UVRABC system protein B|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EHYSLP 6
EHYS+P
Sbjct: 259 EHYSVP 264


>sp|SYFB_NATPD|PHENYLALANINE--TRNA ligase beta subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 3 YSLPPVID 10
+S PPVI+
Sbjct: 218 FSFPPVIN 225


>sp|RIFK_METB6|RIBOFLAVIN kinase|Methanoregula boonei (strain DSM 21154

Query: 2 HYSLPPVI 9
HY+LP ++
Sbjct: 92 HYTLPGIV 99


>sp|SYFB_HALSA|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 700922

Query: 3 YSLPPVID 10
+S PPVI+
Sbjct: 217 FSFPPVIN 224


>sp|SYFB_HALS3|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 29341

Query: 3 YSLPPVID 10
+S PPVI+
Sbjct: 217 FSFPPVIN 224


>sp|GGGPS_PYRFU|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EHYSLPPVI 9
E+YSLP ++
Sbjct: 71 ENYSLPVIL 79


>sp|FEN_NANEQ|FLAP endonuclease 1|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 EHYSLPPVID 10
E + PPVID
Sbjct: 277 EFFLNPPVID 286




361|Sequence|1801|1810|PPVIDKMNIE

>sp|RS15_METTP|SMALL ribosomal subunit protein uS15|Methanothrix thermoacetophila

Query: 1 PPVIDKM 7
PPV+DK+
Sbjct: 16 PPVVDKL 22


>sp|PUR2_METM7|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C7 /

Query: 4 IDKMNIE 10
+DKMNIE
Sbjct: 327 LDKMNIE 333


>sp|PUR2_METM6|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C6 /

Query: 4 IDKMNIE 10
+DKMNIE
Sbjct: 327 LDKMNIE 333


>sp|AATE_THEVO|A-TYPE ATP synthase subunit E|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PPVIDKMNIE 10
+IDK NIE
Sbjct: 60 ASIIDKANIE 69


>sp|CBSA_SACS2|CYTOCHROME b558/566 subunit A|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PPVIDKMNI 9
PP D MNI
Sbjct: 239 PPTKDGMNI 247


>sp|PMDHS_METJA|PHOSPHOMEVALONATE dehydratase small subunit|Methanocaldococcus jannaschii (strain

Query: 2 PVIDKMNIE 10
P++DK++IE
Sbjct: 99 PLVDKIDIE 107


>sp|AROC_SACS2|CHORISMATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PVIDKMNIE 10
PV DKM E
Sbjct: 225 PVFDKMKAE 233


>sp|AROC_SACI1|CHORISMATE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 PVIDKMNIE 10
PV DKM E
Sbjct: 225 PVFDKMKAE 233


>sp|AROC_SACI7|CHORISMATE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 PVIDKMNIE 10
PV DKM E
Sbjct: 225 PVFDKMKAE 233


>sp|AROC_SACI6|CHORISMATE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 PVIDKMNIE 10
PV DKM E
Sbjct: 225 PVFDKMKAE 233


>sp|AROC_SACI4|CHORISMATE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PVIDKMNIE 10
PV DKM E
Sbjct: 225 PVFDKMKAE 233


>sp|AROC_SACI3|CHORISMATE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 PVIDKMNIE 10
PV DKM E
Sbjct: 225 PVFDKMKAE 233


>sp|AROC_SACI2|CHORISMATE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 PVIDKMNIE 10
PV DKM E
Sbjct: 225 PVFDKMKAE 233


>sp|AATE_THEAC|A-TYPE ATP synthase subunit E|Thermoplasma acidophilum (strain ATCC

Query: 2 PVIDKMNIE 10
+IDK N+E
Sbjct: 61 SIIDKANVE 69


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 4 IDKMNIE 10
+DK+NIE
Sbjct: 265 VDKLNIE 271


>sp|K6PF_THEKO|ADP-SPECIFIC phosphofructokinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 VIDKMNIE 10
+ID+MN+E
Sbjct: 331 LIDEMNLE 338


>sp|METE_SULTO|METHIONINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PVIDKMNIE 10
P +DK+N++
Sbjct: 222 PYLDKLNVD 230


>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 3 VIDKMNIE 10
V+DK NIE
Sbjct: 343 VLDKWNIE 350




362|Sequence|1806|1815|KMNIELTQLK

>sp|Y1413_SULTO|PROTEIN STK_14130|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KMNIELTQ 8
K+NIE+T+
Sbjct: 109 KLNIEITE 116




363|Sequence|1811|1820|LTQLKLSRTI

>sp|BRIX_SULTO|PROBABLE Brix domain-containing ribosomal biogenesis|Sulfurisphaera tokodaii

Query: 1 LTQLKLSRTI 10
LT+LKL RT+
Sbjct: 94 LTELKLHRTL 103




364|Sequence|1816|1825|LSRTILQASL

>sp|APGM_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina acetivorans (strain ATCC

Query: 2 SRTILQAS 9
SRTILQA+
Sbjct: 21 SRTILQAA 28


>sp|SERA_METTH|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LSRTILQASL 10
L+RT+LQA L
Sbjct: 366 LTRTMLQAIL 375




365|Sequence|1821|1830|LQASLPQNDI

>sp|RFCL_PICTO|REPLICATION factor C large subunit|Picrophilus torridus (strain ATCC 700027

Query: 4 SLPQNDI 10
SLP+NDI
Sbjct: 202 SLPENDI 208


>sp|PSB1_HALTV|PROTEASOME subunit beta 1|Haloterrigena turkmenica (strain ATCC 51198

Query: 3 ASLPQNDI 10
S+PQND+
Sbjct: 29 GSMPQNDL 36


>sp|SECD_HALWD|PROTEIN-EXPORT membrane protein SecD|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LQASLPQNDI 10
+QA PQ+DI
Sbjct: 202 VQAHYPQDDI 211


>sp|AATB_METTP|A-TYPE ATP synthase subunit B|Methanothrix thermoacetophila (strain DSM

Query: 3 ASLPQNDI 10
A LP ND+
Sbjct: 152 AGLPHNDV 159


>sp|Y151_ARCFU|UNCHARACTERIZED protein AF_0151|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 SLPQNDI 10
+LPQND+
Sbjct: 51 ALPQNDV 57


>sp|FAEHP_METHJ|BIFUNCTIONAL enzyme Fae/Hps|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 ASLPQND 9
+SLP+ND
Sbjct: 192 SSLPEND 198




366|Sequence|1826|1835|PQNDIEILKP

>sp|DP2S_THEAC|DNA polymerase II small subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 QNDIEILKP 10
+ND+EIL P
Sbjct: 288 ENDLEILNP 296


>sp|COBQ_METBF|PROBABLE cobyric acid synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 QNDIEILKP 10
+ D+EILKP
Sbjct: 199 RGDLEILKP 207


>sp|COBQ_METMA|PROBABLE cobyric acid synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 QNDIEILKP 10
+ DIEIL+P
Sbjct: 199 RGDIEILRP 207


>sp|PUR8_PYRAB|ADENYLOSUCCINATE lyase|Pyrococcus abyssi (strain GE5 /

Query: 2 QNDIEILKP 10
+ND+E LKP
Sbjct: 416 ENDLEGLKP 424


>sp|IF2P_METS5|PROBABLE translation initiation factor IF-2|Metallosphaera sedula (strain

Query: 1 PQNDIEIL 8
PQ D+EIL
Sbjct: 555 PQEDLEIL 562


>sp|RS8_AERPE|SMALL ribosomal subunit protein uS8|Aeropyrum pernix (strain ATCC

Query: 3 NDIEILKP 10
NDI ++KP
Sbjct: 70 NDIGVVKP 77


>sp|Y963_METJA|UNCHARACTERIZED protein MJ0963|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NDIEILKP 10
NDI +LKP
Sbjct: 101 NDITLLKP 108


>sp|GSA_CALMQ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 PQNDIEILK 9
P ND+E L+
Sbjct: 180 PYNDVEALE 188


>sp|GSA_AERPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PQNDIEILK 9
P ND+E L+
Sbjct: 181 PYNDVEALE 189


>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PQNDIEILK 9
P N+IEI+K
Sbjct: 73 PLNNIEIIK 81


>sp|Y538_METJA|UNCHARACTERIZED protein MJ0538|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DIEILKP 10
DIE++KP
Sbjct: 79 DIEVIKP 85


>sp|KDAD_SACS2|2-DEHYDRO-3-DEOXY-D-ARABINONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 NDIEILKP 10
NDI I KP
Sbjct: 68 NDIRITKP 75




367|Sequence|1831|1840|EILKPVNMLL

>sp|METK_METS3|S-ADENOSYLMETHIONINE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 EILKPVNMLL 10
+ILKP+++LL
Sbjct: 79 KILKPIDILL 88


>sp|METK_METMA|S-ADENOSYLMETHIONINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EILKPVNMLL 10
E+L+P+ MLL
Sbjct: 80 EVLQPIYMLL 89


>sp|METK_METAC|S-ADENOSYLMETHIONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EILKPVNMLL 10
E+L+P+ MLL
Sbjct: 80 EVLQPIYMLL 89


>sp|METK_METBU|S-ADENOSYLMETHIONINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EILKPVNMLL 10
E+LKP+ LL
Sbjct: 80 EVLKPIYTLL 89


>sp|METK_METBF|S-ADENOSYLMETHIONINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EILKPVNMLL 10
EIL+P+ +LL
Sbjct: 80 EILQPIYILL 89


>sp|DGGGP_METST|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 EILKPVNMLL 10
EIL+P N L+
Sbjct: 6 EILRPTNALM 15


>sp|DGGGP_METTH|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 EILKPVNMLL 10
EIL+PVN ++
Sbjct: 6 EILRPVNAVM 15


>sp|DGGGP_THESM|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus sibiricus (strain DSM 12597

Query: 1 EILKPVNMLL 10
EIL+P+N L+
Sbjct: 8 EILRPINCLI 17


>sp|COFG_METBU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EILKPVNM 8
EILKP+N+
Sbjct: 117 EILKPLNI 124


>sp|PUR8_ARCFU|ADENYLOSUCCINATE lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EILKPVNML 9
EILKP N L
Sbjct: 417 EILKPENYL 425


>sp|Y2318_METBF|PUTATIVE HTH-type transcriptional regulatory protein|Methanosarcina barkeri

Query: 1 EILKPVNML 9
E+ KP+N+L
Sbjct: 182 ELAKPINIL 190


>sp|Y778_AERPE|PUTATIVE HTH-type transcriptional regulatory protein|Aeropyrum pernix

Query: 1 EILKPVNML 9
EIL+P+++L
Sbjct: 192 EILEPIDIL 200


>sp|AMPPA_THEPD|AMP phosphorylase|Thermofilum pendens (strain DSM 2475

Query: 1 EILKPVNM 8
E+L PVN+
Sbjct: 208 EVLAPVNL 215




368|Sequence|1836|1845|VNMLLSIQRN

***** No hits found ******


369|Sequence|1841|1850|SIQRNLAAAW

***** No hits found ******


370|Sequence|1846|1855|LAAAWYVQIP

>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LAAAWYVQIP 10
+ WY++IP
Sbjct: 539 IEGKWYIEIP 548


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 WYVQIP 10
WY++IP
Sbjct: 546 WYIEIP 551


>sp|VHUA_METJA|F420-NON-REDUCING hydrogenase vhu subunit A|Methanocaldococcus jannaschii (strain

Query: 3 AAWYVQIP 10
AAW V+IP
Sbjct: 78 AAWGVEIP 85


>sp|VHUA_METVO|F420-NON-REDUCING hydrogenase vhu subunit A|Methanococcus voltae

Query: 3 AAWYVQIP 10
AAW QIP
Sbjct: 78 AAWGAQIP 85


>sp|NADA_METTH|QUINOLINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 AWYVQ 8
AWYVQ
Sbjct: 153 AWYVQ 157


>sp|TRM1_PYRAR|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum arsenaticum

Query: 1 LAAAWYVQIP 10
+AA W+ ++P
Sbjct: 295 VAAPWFFKVP 304


>sp|GATB_ARCFU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Archaeoglobus fulgidus (strain ATCC

Query: 1 LAAAWYVQI 9
LAA+W V +
Sbjct: 336 LAASWIVDV 344


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 WYVQI 9
WYVQI
Sbjct: 728 WYVQI 732




371|Sequence|1851|1860|YVQIPGMEIK

>sp|TBP_CENSY|TATA-BOX-BINDING protein|Cenarchaeum symbiosum (strain A)

Query: 1 YVQIPGME 8
Y++ PGM+
Sbjct: 47 YIKTPGMQ 54


>sp|QUEC_SACS2|7-CYANO-7-DEAZAGUANINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YVQIPGMEI 9
Y+QIP +EI
Sbjct: 293 YLQIPLLEI 301


>sp|RL5_NANEQ|LARGE ribosomal subunit protein uL5|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 YVQIPGME 8
Y+ IPGM+
Sbjct: 105 YIMIPGMK 112


>sp|RS4E_AERPE|SMALL ribosomal subunit protein eS4|Aeropyrum pernix (strain ATCC 700893

Query: 2 VQIPGMEIK 10
+ +PG EIK
Sbjct: 171 ITVPGQEIK 179


>sp|IF2G_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 YVQIPGMEI 9
YV PG EI
Sbjct: 91 YVDAPGHEI 99


>sp|RL34_HYPBU|LARGE ribosomal subunit protein eL34|Hyperthermus butylicus (strain DSM

Query: 1 YVQIPGMEIK 10
YV+ PG E K
Sbjct: 15 YVRTPGGETK 24


>sp|Y905_ARCFU|UPF0292 protein AF_0905|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YVQIPGMEIK 10
Y +IP +EIK
Sbjct: 86 YGKIPDVEIK 95




372|Sequence|1856|1865|GMEIKGKLKP

>sp|AROA_ARCFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 3 EIKGKLKP 10
EI+GK KP
Sbjct: 9 EIRGKAKP 16


>sp|Y733_METJA|UNCHARACTERIZED protein MJ0733|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EIKGKLK 9
EIKGKLK
Sbjct: 91 EIKGKLK 97


>sp|EF1B_CALMQ|ELONGATION factor 1-beta|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 IKGKLKP 10
IKGKL+P
Sbjct: 26 IKGKLEP 32


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 GMEIKGKL 8
GME++G++
Sbjct: 594 GMEVRGRI 601




373|Sequence|1861|1870|GKLKPMQVAL

>sp|PUR7_THEVO|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GKLKPMQVAL 10
GK+KPM + L
Sbjct: 115 GKVKPMDIGL 124


>sp|RL30_THEAC|LARGE ribosomal subunit protein uL30|Thermoplasma acidophilum (strain

Query: 1 GKLKPMQVA 9
GK+KP ++A
Sbjct: 102 GKIKPSEIA 110


>sp|Y1859_ARCFU|UNCHARACTERIZED protein AF_1859|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GKLKPMQV 8
GK+KP +V
Sbjct: 163 GKIKPREV 170


>sp|ADH_SULAC|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GKLKPM 6
GK+KPM
Sbjct: 308 GKIKPM 313




374|Sequence|1866|1875|MQVALSEDDL

>sp|CARB2_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 1 MQVALSEDDL 10
MQ+ SED+L
Sbjct: 254 MQIVYSEDEL 263




375|Sequence|1871|1880|SEDDLTVLMK

>sp|DHYS_METKA|PROBABLE deoxyhypusine synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 SEDDLTVLM 9
S DD+TVL+
Sbjct: 44 SSDDVTVLL 52


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain ATCC

Query: 1 SEDDLT 6
SEDDLT
Sbjct: 233 SEDDLT 238


>sp|DNAG_METS3|DNA primase DnaG|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 EDDLTVLMK 10
EDD T LMK
Sbjct: 324 EDDETKLMK 332


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 SEDDLT 6
SEDDLT
Sbjct: 227 SEDDLT 232


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 SEDDLT 6
SEDDLT
Sbjct: 234 SEDDLT 239




376|Sequence|1876|1885|TVLMKILLEN

***** No hits found ******


377|Sequence|1881|1890|ILLENLGEAS

>sp|GLNA_PYRHO|GLUTAMINE synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ILLENLGEA 9
+L ENLGEA
Sbjct: 376 MLPENLGEA 384


>sp|MOAA_METJA|PROBABLE GTP 3',8-cyclase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILLENLGE 8
ILLENL E
Sbjct: 95 ILLENLAE 102


>sp|Y1115_METJA|UNCHARACTERIZED protein MJ1115|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILLENLGEA 9
+++EN G+A
Sbjct: 51 VMIENFGDA 59




378|Sequence|1886|1895|LGEASSQPSP

>sp|RL3_AERPE|LARGE ribosomal subunit protein uL3|Aeropyrum pernix (strain ATCC 700893

Query: 1 LGEASSQPSP 10
LGEA +QP P
Sbjct: 102 LGEAWAQPPP 111




379|Sequence|1891|1900|SQPSPTQSVQ

***** No hits found ******


380|Sequence|1896|1905|TQSVQETVRV

>sp|PURL_CALMQ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 TQSVQETVRV 10
T +++ETVR+
Sbjct: 668 TSNLKETVRI 677




381|Sequence|1901|1910|ETVRVRKVDV

>sp|PUR7_THEAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 TVRVRKVDV 10
T+RVRK DV
Sbjct: 73 TMRVRKYDV 81


>sp|GLMM_THEKO|PROBABLE phosphoglucosamine mutase|Thermococcus kodakarensis (strain ATCC

Query: 1 ETVRVRKVDV 10
+TVRV K DV
Sbjct: 219 KTVRVMKADV 228


>sp|ENO_THEVO|ENOLASE volcanium (strain ATCC 51530

Query: 1 ETVRVRKV 8
E VRVRKV
Sbjct: 6 EDVRVRKV 13


>sp|GLMM_THEGJ|PROBABLE phosphoglucosamine mutase|Thermococcus gammatolerans (strain DSM

Query: 1 ETVRVRKVDV 10
+TVRV K DV
Sbjct: 219 KTVRVMKADV 228


>sp|ENO_METTH|ENOLASE thermautotrophicus (strain ATCC 29096

Query: 1 ETVRVRKV 8
E VRVRK+
Sbjct: 6 EDVRVRKI 13




382|Sequence|1906|1915|RKVDVSSVPD

>sp|AOX1_AERPE|HEME-COPPER oxidase subunit I+III|Aeropyrum pernix (strain ATCC 700893

Query: 2 KVDVSSVP 9
+VDVS+VP
Sbjct: 543 RVDVSNVP 550


>sp|MFNA_METST|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosphaera stadtmanae

Query: 2 KVDVSSVPD 10
K+DV+ +PD
Sbjct: 147 KIDVTKLPD 155


>sp|LEU1_ARCFU|PROBABLE 2-isopropylmalate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 2 KVDVSSVPD 10
KVD+ +VPD
Sbjct: 161 KVDIVNVPD 169


>sp|RIFK_THEVO|RIBOFLAVIN kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KVDVSSVPD 10
KVD SS+P+
Sbjct: 135 KVDPSSIPE 143


>sp|Y1355_METJA|UNCHARACTERIZED protein MJ1355|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KVDVSSVPD 10
K+D+ +PD
Sbjct: 66 KIDLEKIPD 74


>sp|RL13_PYRAE|LARGE ribosomal subunit protein uL13|Pyrobaculum aerophilum (strain

Query: 1 RKVDVSSVPD 10
R +D+S +PD
Sbjct: 6 RPLDISQLPD 15


>sp|Y1227_ARCFU|UNCHARACTERIZED protein AF_1227|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RKVDVSSVPD 10
+KVD+SS+ +
Sbjct: 80 KKVDLSSIEE 89


>sp|RL10_PYRFU|LARGE ribosomal subunit protein uL10|Pyrococcus furiosus (strain ATCC

Query: 3 VDVSSVP 9
VDVSS+P
Sbjct: 28 VDVSSMP 34


>sp|RL10_PYRAB|LARGE ribosomal subunit protein uL10|Pyrococcus abyssi (strain GE5 /

Query: 3 VDVSSVP 9
VDVSS+P
Sbjct: 28 VDVSSMP 34


>sp|PCNA_METKA|DNA polymerase sliding clamp|Methanopyrus kandleri (strain AV19 /

Query: 1 RKVDVSSVPD 10
R +D+ +PD
Sbjct: 117 RSIDIDDIPD 126


>sp|RL10_PYRHO|LARGE ribosomal subunit protein uL10|Pyrococcus horikoshii (strain ATCC

Query: 3 VDVSSVP 9
VDVSS+P
Sbjct: 28 VDVSSMP 34


>sp|AROA_METVS|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus vannielii (strain ATCC

Query: 2 KVDVSSVPD 10
++DV+++PD
Sbjct: 303 EIDVTNIPD 311


>sp|IF2P_THEAC|PROBABLE translation initiation factor IF-2|Thermoplasma acidophilum (strain

Query: 3 VDVSSVPD 10
+DVS++PD
Sbjct: 393 MDVSTLPD 400


>sp|RNP3_METTH|RIBONUCLEASE P protein component 3|Methanothermobacter thermautotrophicus

Query: 1 RKVDVSSVP 9
R+VDV S P
Sbjct: 113 RRVDVLSAP 121




383|Sequence|1911|1920|SSVPDHLKEQ

>sp|UPPS_PICTO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Picrophilus torridus

Query: 1 SSVPDHLKE 9
S +PD+LKE
Sbjct: 124 SKLPDYLKE 132


>sp|RL21_METMA|LARGE ribosomal subunit protein eL21|Methanosarcina mazei (strain ATCC

Query: 2 SVPDHLKEQ 10
SVP HLK Q
Sbjct: 87 SVPQHLKPQ 95


>sp|SYH_PYRCJ|HISTIDINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 SSVPDHLK 8
S +PDHL+
Sbjct: 2 SGLPDHLR 9


>sp|SYH_PYRAE|HISTIDINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SSVPDHLK 8
S +PDHL+
Sbjct: 2 SGLPDHLR 9


>sp|RS5_METKA|SMALL ribosomal subunit protein uS5|Methanopyrus kandleri (strain

Query: 2 SVPDHLKE 9
SVP HL+E
Sbjct: 2 SVPPHLEE 9


>sp|EF1A_HALMA|ELONGATION factor 1-alpha|Haloarcula marismortui (strain ATCC 43049

Query: 1 SSVPDHLKEQ 10
SVP+H+ EQ
Sbjct: 31 GSVPEHVIEQ 40


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 SSVPDHLK 8
S++PDH+K
Sbjct: 206 SNMPDHIK 213


>sp|PIMT_METJA|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 VPDHLKE 9
+P+HLKE
Sbjct: 38 LPEHLKE 44


>sp|EF1A_HALWD|ELONGATION factor 1-alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SSVPDHLKEQ 10
SVP+H+ EQ
Sbjct: 31 GSVPEHVIEQ 40


>sp|EF1A_NATPD|ELONGATION factor 1-alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SSVPDHLKEQ 10
SVP+H+ EQ
Sbjct: 32 GSVPEHVIEQ 41


>sp|GLMM_METM5|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C5 /

Query: 4 PDHLKEQ 10
PD+LK+Q
Sbjct: 368 PDNLKQQ 374


>sp|AROD_METTP|3-DEHYDROQUINATE dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 SSVPDHLK 8
S VPD+LK
Sbjct: 127 SGVPDNLK 134


>sp|RPO1C_THEGJ|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus gammatolerans (strain

Query: 1 SSVPDHLKEQ 10
S +PD++KE+
Sbjct: 14 SELPDNIKEE 23


>sp|ATGT_METST|TRNA-GUANINE(15) transglycosylase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 SSVPDHLKE 9
S VP HLK+
Sbjct: 375 SEVPKHLKQ 383


>sp|RL21_METAC|LARGE ribosomal subunit protein eL21|Methanosarcina acetivorans (strain

Query: 2 SVPDHLKEQ 10
S+P HLK Q
Sbjct: 87 SLPQHLKPQ 95


>sp|RL21_METBF|LARGE ribosomal subunit protein eL21|Methanosarcina barkeri (strain

Query: 2 SVPDHLKEQ 10
S+P HLK Q
Sbjct: 87 SLPQHLKPQ 95


>sp|Y1470_META3|UNCHARACTERIZED solute-binding protein Maeo_1470|Methanococcus aeolicus (strain

Query: 2 SVPDHLKE 9
++PD LKE
Sbjct: 336 NIPDELKE 343


>sp|TF2B1_THEAC|TRANSCRIPTION initiation factor IIB 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 SVPDHLKE 9
S+PD +KE
Sbjct: 139 SIPDDVKE 146


>sp|EF1A_HALSA|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 700922

Query: 2 SVPDHLKEQ 10
SVP+H+ EQ
Sbjct: 32 SVPEHVIEQ 40


>sp|EF1A_HALS3|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 29341

Query: 2 SVPDHLKEQ 10
SVP+H+ EQ
Sbjct: 32 SVPEHVIEQ 40


>sp|Y332_METJA|UNCHARACTERIZED protein MJ0332|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VPDHLKEQ 10
VPD +KE+
Sbjct: 41 VPDDIKEE 48


>sp|IF2P_METAR|PROBABLE translation initiation factor IF-2|Methanocella arvoryzae (strain

Query: 1 SSVPDHLK 8
+S PDH+K
Sbjct: 156 NSQPDHVK 163


>sp|RL30E_METTH|LARGE ribosomal subunit protein eL30|Methanothermobacter

Query: 1 SSVPDHLKE 9
S++P+ LKE
Sbjct: 39 SNIPEDLKE 47




384|Sequence|1916|1925|HLKEQEDWTD

>sp|COBQ_ARCFU|PROBABLE cobyric acid synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LKEQEDWTD 10
+++EDW D
Sbjct: 439 FRQKEDWAD 447


>sp|EF2_SULTO|ELONGATION factor 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LKEQEDW 8
LKEQ DW
Sbjct: 527 LKEQADW 533


>sp|RS19E_PYRHO|SMALL ribosomal subunit protein eS19|Pyrococcus horikoshii (strain ATCC

Query: 2 LKEQEDW 8
L EQEDW
Sbjct: 44 LPEQEDW 50


>sp|RS19E_PYRAB|SMALL ribosomal subunit protein eS19|Pyrococcus abyssi (strain GE5 /

Query: 2 LKEQEDW 8
L EQEDW
Sbjct: 44 LPEQEDW 50


>sp|RS19E_PYRFU|SMALL ribosomal subunit protein eS19|Pyrococcus furiosus (strain ATCC

Query: 2 LKEQEDW 8
L EQEDW
Sbjct: 44 LPEQEDW 50


>sp|PMDHL_THEKO|PHOSPHOMEVALONATE dehydratase large subunit|Thermococcus kodakarensis (strain ATCC

Query: 5 QEDWTD 10
Q+DW+D
Sbjct: 270 QDDWSD 275


>sp|AGL7_HALVD|LOW-SALT glycan biosynthesis sulfotransferase Agl7|Haloferax volcanii

Query: 2 LKEQEDW 8
L EQEDW
Sbjct: 83 LSEQEDW 89


>sp|AROD_PYRAE|3-DEHYDROQUINATE dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LKEQEDWTD 10
L+E DW D
Sbjct: 231 LREALDWVD 239


>sp|RS19E_THEKO|SMALL ribosomal subunit protein eS19|Thermococcus kodakarensis (strain

Query: 2 LKEQEDW 8
L EQEDW
Sbjct: 44 LPEQEDW 50


>sp|CBPX2_SACS2|THERMOSTABLE carboxypeptidase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LKEQEDW 8
+KE EDW
Sbjct: 11 VKEIEDW 17


>sp|HDRA_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 1 HLKEQEDW 8
+L+EQ+ W
Sbjct: 107 NLREQDSW 114


>sp|Y787_METJA|UNCHARACTERIZED protein MJ0787|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HLKEQEDW 8
H E EDW
Sbjct: 181 HADEFEDW 188


>sp|VHTC_METMA|F420 non-reducing hydrogenase II cytochrome|Methanosarcina mazei (strain

Query: 1 HLKEQEDWTD 10
HL ++E W D
Sbjct: 251 HLPDRELWRD 260


>sp|RS27A_SACS2|SMALL ribosomal subunit protein eS31|Saccharolobus solfataricus (strain

Query: 1 HLKEQEDWT 9
HLK E W+
Sbjct: 51 HLKPNERWS 59


>sp|ACDD2_METTE|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 2 LKEQEDW 8
LKE DW
Sbjct: 368 LKEDSDW 374


>sp|Y138_METJA|PUTATIVE glutamine amidotransferase-like protein MJ0138|Methanocaldococcus

Query: 1 HLKEQED 7
H+K++ED
Sbjct: 460 HIKDEED 466


>sp|ACDD_METMA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina mazei

Query: 2 LKEQEDW 8
LKE DW
Sbjct: 367 LKEDSDW 373




385|Sequence|1921|1930|EDWTDSKLSM

>sp|RRP4_PYRFU|EXOSOME complex component Rrp4|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EDWTDSKLSM 10
+D+TD K+ +
Sbjct: 95 QDYTDEKIDL 104




386|Sequence|1926|1935|SKLSMNQIVS

>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SKLSMNQI 8
SK+S+NQ+
Sbjct: 483 SKISINQV 490




387|Sequence|1931|1940|NQIVSLQFDF

***** No hits found ******


388|Sequence|1936|1945|LQFDFHFESL

>sp|PYRK_METBF|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanosarcina barkeri

Query: 3 FDFHFESL 10
FDF FE++
Sbjct: 23 FDFQFETM 30


>sp|MALA_HALJT|ALPHA-AMYLASE MalA|Haloarcula japonica (strain ATCC 49778

Query: 3 FDFHFES 9
FD HF+S
Sbjct: 453 FDMHFDS 459


>sp|PUS10_NITMS|TRNA pseudouridine synthase Pus10|Nitrosopumilus maritimus (strain SCM1)

Query: 1 LQFDFH 6
L+FDFH
Sbjct: 371 LEFDFH 376


>sp|RPO3_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermoplasma volcanium (strain ATCC

Query: 2 QFDFHFES 9
+F FHFE+
Sbjct: 234 RFIFHFET 241


>sp|PMK_SACS2|PHOSPHOMEVALONATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 QFDFHFESL 10
+ DF+FE L
Sbjct: 166 KMDFYFEKL 174




389|Sequence|1941|1950|HFESLSIILY

>sp|SYH_ARCFU|HISTIDINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HFESLSIIL 9
H ESLS +L
Sbjct: 234 HLESLSALL 242




390|Sequence|1946|1955|SIILYNNDIN

>sp|MCRB_METFE|METHYL-COENZYME M reductase subunit beta|Methanothermus fervidus

Query: 1 SIILYNNDI 9
S ILY+NDI
Sbjct: 329 STILYDNDI 337


>sp|CDC63_SULTO|ORC1-TYPE DNA replication protein 3|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SIILYNNDIN 10
S+I+ +NDIN
Sbjct: 175 SVIMISNDIN 184


>sp|CDC63_SULAC|ORC1-TYPE DNA replication protein 3|Sulfolobus acidocaldarius (strain ATCC

Query: 1 SIILYNNDIN 10
S+I+ +NDIN
Sbjct: 175 SVIMVSNDIN 184


>sp|MCRB_METVA|METHYL-COENZYME M reductase subunit beta|Methanococcus vannielii

Query: 1 SIILYNNDI 9
S+ILY NDI
Sbjct: 329 SVILYYNDI 337


>sp|RPA_METTH|REPLICATION factor A|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 LYNNDIN 10
L+NND+N
Sbjct: 232 LWNNDVN 238


>sp|MSRA_SACS2|PEPTIDE methionine sulfoxide reductase MsrA|Saccharolobus solfataricus

Query: 1 SIILYNND 8
SIILY+N+
Sbjct: 95 SIILYHNE 102


>sp|CDC63_SACS2|ORC1-TYPE DNA replication protein 3|Saccharolobus solfataricus (strain ATCC

Query: 1 SIILYNNDIN 10
S+I+ +NDIN
Sbjct: 176 SVIMISNDIN 185


>sp|MCRB_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SIILYNNDI 9
S ILY NDI
Sbjct: 333 STILYYNDI 341


>sp|MCRY_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SIILYNNDI 9
S +LY NDI
Sbjct: 330 STVLYYNDI 338


>sp|ILVC_METST|KETOL-ACID reductoisomerase (NADP(+))|Methanosphaera stadtmanae (strain ATCC

Query: 3 ILYNNDIN 10
+LY++D+N
Sbjct: 3 VLYDDDVN 10


>sp|MCRB_METVO|METHYL-COENZYME M reductase subunit beta|Methanococcus voltae

Query: 1 SIILYNNDI 9
S ILY NDI
Sbjct: 329 STILYYNDI 337


>sp|KHSE_METVS|HOMOSERINE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 4 LYNNDIN 10
LYNND++
Sbjct: 211 LYNNDLD 217


>sp|MSRA_NATPD|PEPTIDE methionine sulfoxide reductase MsrA|Natronomonas pharaonis (strain

Query: 1 SIILYNND 8
SI+LY++D
Sbjct: 96 SIVLYHDD 103


>sp|KHSE_METMP|HOMOSERINE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 4 LYNNDIN 10
LYNND++
Sbjct: 210 LYNNDLD 216


>sp|MCRY_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 SIILYNNDI 9
S +LY NDI
Sbjct: 329 STVLYYNDI 337


>sp|MCRY_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 SIILYNNDI 9
S +LY NDI
Sbjct: 329 STVLYYNDI 337


>sp|RNJL_METJA|RNASE J-like protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ILYNNDIN 10
ILY DIN
Sbjct: 148 ILYTGDIN 155


>sp|KHSE_METM5|HOMOSERINE kinase|Methanococcus maripaludis (strain C5 /

Query: 4 LYNNDI 9
LYNND+
Sbjct: 210 LYNNDL 215


>sp|Y778_METJA|UNCHARACTERIZED protein MJ0778|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IILYNNDIN 10
IIL N++IN
Sbjct: 157 IILLNDEIN 165


>sp|PSB1_SULAC|PROTEASOME subunit beta 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SIILYNNDI 9
S+ILY N +
Sbjct: 88 SVILYQNKV 96


>sp|KHSE_METM7|HOMOSERINE kinase|Methanococcus maripaludis (strain C7 /

Query: 4 LYNNDI 9
LYNND+
Sbjct: 210 LYNNDL 215


>sp|KHSE_METM6|HOMOSERINE kinase|Methanococcus maripaludis (strain C6 /

Query: 4 LYNNDI 9
LYNND+
Sbjct: 210 LYNNDL 215




391|Sequence|1951|1960|NNDINQESGV

>sp|EF2_THEVO|ELONGATION factor 2|Thermoplasma volcanium (strain ATCC 51530

Query: 3 DINQESG 9
DINQE+G
Sbjct: 423 DINQETG 429


>sp|EF2_THEAC|ELONGATION factor 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 DINQESG 9
DINQE+G
Sbjct: 423 DINQETG 429


>sp|FDHB_METTF|F420-DEPENDENT formate dehydrogenase subunit beta|Methanothermobacter

Query: 2 NDINQESG 9
ND N+E+G
Sbjct: 271 NDFNEETG 278


>sp|EF2_PICTO|ELONGATION factor 2|Picrophilus torridus (strain ATCC 700027

Query: 3 DINQESG 9
DINQE+G
Sbjct: 423 DINQETG 429


>sp|PSB1_THEON|PROTEASOME subunit beta 1|Thermococcus onnurineus (strain NA1)

Query: 2 NDINQESGV 10
+DIN E GV
Sbjct: 151 DDINVEEGV 159


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 2 NDINQESGV 10
ND N++SG+
Sbjct: 1383 NDHNKQSGI 1391




392|Sequence|1956|1965|QESGVAFHND

>sp|HELS_PYRCJ|ATP-DEPENDENT DNA helicase Hel308|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 GVAFHN 9
GVAFHN
Sbjct: 303 GVAFHN 308


>sp|HELS_METTH|ATP-DEPENDENT DNA helicase Hel308|Methanothermobacter thermautotrophicus (strain

Query: 2 ESGVAFHN 9
E+G+AFH+
Sbjct: 290 EAGIAFHH 297


>sp|Y1301_METJA|UNCHARACTERIZED ATP-binding protein MJ1301|Methanocaldococcus jannaschii (strain

Query: 2 ESGVAFHN 9
ESGVAF N
Sbjct: 230 ESGVAFGN 237


>sp|HELS_PYRAB|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus abyssi (strain GE5 /

Query: 3 SGVAFHN 9
SGVAFH+
Sbjct: 295 SGVAFHH 301


>sp|PUR5_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QESGVAFHN 9
QESG ++H+
Sbjct: 197 QESGYSYHD 205


>sp|OGG1_SULAC|8-OXOGUANINE DNA glycosylase/AP lyase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 QESGVAFHN 9
QESG F+N
Sbjct: 75 QESGYRFYN 83


>sp|DNAK_METTP|CHAPERONE protein DnaK|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 QESGVAFHND 10
QE+G+ ND
Sbjct: 221 QETGINLRND 230


>sp|RL35A_AERPE|LARGE ribosomal subunit protein eL33|Aeropyrum pernix (strain ATCC

Query: 3 SGVAFHND 10
SG+AF+ D
Sbjct: 40 SGIAFYRD 47


>sp|HELS_PYRHO|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ESGVAFHN 9
+ GVAFH+
Sbjct: 294 QGGVAFHH 301


>sp|LIPB_PYRCJ|PROBABLE octanoyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 ESGVAFH 8
E GVA+H
Sbjct: 135 EGGVAYH 141


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 SGVAFHND 10
SG+ FH D
Sbjct: 670 SGIGFHVD 677


>sp|OGG1_ARCFU|8-OXOGUANINE DNA glycosylase/AP lyase|Archaeoglobus fulgidus (strain ATCC

Query: 3 SGVAFHN 9
+GV FHN
Sbjct: 76 AGVRFHN 82


>sp|PUR5_METBU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 QESGVAFHND 10
+ESG ++H D
Sbjct: 197 KESGHSYHED 206


>sp|HELS_METVS|ATP-DEPENDENT DNA helicase Hel308|Methanococcus vannielii (strain ATCC 35089

Query: 2 ESGVAFHN 9
+ GVAFH+
Sbjct: 307 KKGVAFHH 314


>sp|HELS_METAR|ATP-DEPENDENT DNA helicase Hel308|Methanocella arvoryzae (strain DSM 22066

Query: 3 SGVAFHN 9
+GVAFH+
Sbjct: 309 NGVAFHH 315


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 ESGVAFHN 9
+ GVAFH+
Sbjct: 295 KGGVAFHH 302


>sp|FPRA_METTM|COENZYME F420H(2) oxidase|Methanothermobacter marburgensis (strain ATCC

Query: 2 ESGVAFHND 10
E G+ F ND
Sbjct: 162 EDGILFSND 170


>sp|FPRA_METJA|COENZYME F420H(2) oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ESGVAFHND 10
E G+ F ND
Sbjct: 166 EGGILFSND 174




393|Sequence|1961|1970|AFHNDSFQLG

>sp|NADK_SACS2|NAD kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 HNDSFQLG 10
HND +LG
Sbjct: 101 HNDKVELG 108


>sp|AROE_SULTO|SHIKIMATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 AFHNDSFQ 8
A HN SFQ
Sbjct: 25 AIHNYSFQ 32




394|Sequence|1966|1975|SFQLGELRLH

>sp|SUA5_PYRAB|THREONYLCARBAMOYL-AMP synthase|Pyrococcus abyssi (strain GE5 /

Query: 4 LGELRLH 10
+GE+R+H
Sbjct: 208 IGEIRIH 214




395|Sequence|1971|1980|ELRLHLMASS

>sp|SYR_METLZ|ARGININE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 ELRLHLMAS 9
ELR HL+A+
Sbjct: 495 ELRPHLLAT 503


>sp|SYR_METB6|ARGININE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 ELRLHLMAS 9
ELR HL+A+
Sbjct: 495 ELRPHLLAT 503




396|Sequence|1976|1985|LMASSGKMFK

***** No hits found ******


397|Sequence|1981|1990|GKMFKDGSMN

>sp|TRPA_PYRFU|TRYPTOPHAN synthase alpha chain|Pyrococcus furiosus (strain ATCC 43587

Query: 3 MFKDGSM 9
MFKDGS+
Sbjct: 1 MFKDGSL 7


>sp|TRPA_PYRAB|TRYPTOPHAN synthase alpha chain|Pyrococcus abyssi (strain GE5 /

Query: 3 MFKDGSM 9
MF+DGS+
Sbjct: 1 MFRDGSL 7


>sp|RS7_META3|SMALL ribosomal subunit protein uS7|Methanococcus aeolicus (strain ATCC

Query: 1 GKMFKDGSMN 10
G+MF+ MN
Sbjct: 41 GRMFEKAKMN 50


>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KMFKDG 7
K+FKDG
Sbjct: 388 KLFKDG 393


>sp|MCH_METS3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GKMFKDGSMN 10
GK++K+G +N
Sbjct: 302 GKIYKEGYVN 311


>sp|DCD_CALMQ|DCTP deaminase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 KMFKDGSM 9
K+ KDGS+
Sbjct: 10 KLIKDGSL 17


>sp|HYPF_METJA|PROBABLE carbamoyltransferase HypF|Methanocaldococcus jannaschii (strain

Query: 3 MFKDGSM 9
+FKDG M
Sbjct: 536 LFKDGKM 542


>sp|PURL_METS5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Metallosphaera sedula (strain ATCC 51363

Query: 1 GKMFKDGS 8
GK+ KDGS
Sbjct: 669 GKVTKDGS 676


>sp|SYY_METBU|TYROSINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 KMFKDGSMN 10
K+F DGS++
Sbjct: 285 KVFADGSLH 293




398|Sequence|1986|1995|DGSMNVSVKL

>sp|SYT_METBF|THREONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DGSMNVSVK 9
DG++NV+++
Sbjct: 580 DGTINVTIR 588


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 1 DGSMNVSV 8
DG++NVS+
Sbjct: 245 DGTINVSI 252


>sp|LPLA_AERPE|PUTATIVE lipoate-protein ligase A|Aeropyrum pernix (strain ATCC 700893

Query: 2 GSMNVSV 8
G+MNVSV
Sbjct: 80 GNMNVSV 86




399|Sequence|1991|2000|VSVKLKTCTL

***** No hits found ******


400|Sequence|1996|2005|KTCTLDDLRE

>sp|SYFA_THEGJ|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 4 TLDDLRE 10
TLDDLRE
Sbjct: 89 TLDDLRE 95


>sp|G3P1_METBF|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 KTCTLDDLR 9
K CT+DD++
Sbjct: 231 KDCTVDDVK 239


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 TLDDLRE 10
T+DDLRE
Sbjct: 834 TIDDLRE 840


Query: 1 KTCTLDDLRE 10
K TLD++RE
Sbjct: 55 KKYTLDEMRE 64


>sp|HIS2_HALWD|PHOSPHORIBOSYL-ATP pyrophosphatase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 CTLDDLRE 10
TLDDLRE
Sbjct: 87 ITLDDLRE 94


>sp|Y1012_METTP|UPF0200 protein Mthe_1012|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 CTLDDLRE 10
CTLD+ RE
Sbjct: 163 CTLDEFRE 170


>sp|SYFA_THEON|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus onnurineus (strain NA1)

Query: 4 TLDDLRE 10
TLDDL+E
Sbjct: 89 TLDDLKE 95


>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 1 KTCTLDDLRE 10
K TL+DLRE
Sbjct: 4 KLPTLEDLRE 13


>sp|NNR_KORCO|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Korarchaeum cryptofilum (strain

Query: 1 KTCTLDDLRE 10
K C+++++RE
Sbjct: 2 KVCSVEEIRE 11


>sp|ACDB_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit beta|Archaeoglobus fulgidus

Query: 4 TLDDLRE 10
TLD+LRE
Sbjct: 404 TLDELRE 410


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 KTCTLDDLRE 10
K TLD++RE
Sbjct: 55 KKYTLDEMRE 64


>sp|DHYS_METS5|PROBABLE deoxyhypusine synthase|Metallosphaera sedula (strain ATCC 51363

Query: 4 TLDDLR 9
TLDDLR
Sbjct: 15 TLDDLR 20


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KTCTLDDLRE 10
K TLD++RE
Sbjct: 55 KKYTLDEMRE 64


>sp|SYFA_THESM|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus sibiricus (strain DSM 12597

Query: 4 TLDDLRE 10
TL+DLRE
Sbjct: 89 TLEDLRE 95


>sp|TRPE_METJA|ANTHRANILATE synthase component 1|Methanocaldococcus jannaschii (strain ATCC

Query: 3 CTLDDLRE 10
C LD LRE
Sbjct: 77 CPLDALRE 84


>sp|GLPK_HALSA|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 700922

Query: 4 TLDDLRE 10
+LDDLRE
Sbjct: 466 SLDDLRE 472


>sp|GLPK_HALS3|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 29341

Query: 4 TLDDLRE 10
+LDDLRE
Sbjct: 466 SLDDLRE 472


>sp|HEM1_METB6|GLUTAMYL-TRNA reductase|Methanoregula boonei (strain DSM 21154

Query: 4 TLDDLRE 10
T+DDLR+
Sbjct: 294 TIDDLRQ 300


>sp|GLPK_HALVD|GLYCEROL kinase|Haloferax volcanii (strain ATCC 29605

Query: 4 TLDDLRE 10
TLD+LRE
Sbjct: 467 TLDELRE 473


>sp|Y3401_METJA|UNCHARACTERIZED protein MJECS01|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CTLDDL 8
CT DDL
Sbjct: 225 CTFDDL 230


>sp|MTMB3_METBF|MONOMETHYLAMINE methyltransferase MtmB3|Methanosarcina barkeri (strain Fusaro /

Query: 1 KTCTLDD 7
+ CTLDD
Sbjct: 20 EKCTLDD 26




401|Sequence|2001|2010|DDLREGIERA

>sp|AAT_SULTO|ASPARTATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DDLREGIER 9
DD+REGI+R
Sbjct: 380 DDIREGIKR 388


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 DDLREGIER 9
DDLRE +ER
Sbjct: 834 DDLREAVER 842


>sp|HUTU_HALSA|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DDLREGIERA 10
DDL E IERA
Sbjct: 228 DDLGEAIERA 237


>sp|HUTU_HALS3|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DDLREGIERA 10
DDL E IERA
Sbjct: 228 DDLGEAIERA 237


>sp|KPRS1_ARCFU|RIBOSE-PHOSPHATE pyrophosphokinase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DDLREGIE 8
DDLR G+E
Sbjct: 197 DDLRTGVE 204


>sp|ILVD_METS3|DIHYDROXY-ACID dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DDLREGIERA 10
D++++GI+RA
Sbjct: 4 DNIKKGIQRA 13


>sp|TRPD_THEKO|ANTHRANILATE phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 DDLREGIERA 10
+D REG+E A
Sbjct: 295 EDFREGLEMA 304


>sp|GLKA_PYRAB|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 DDLREGIE 8
DDLR+G+E
Sbjct: 379 DDLRKGLE 386


>sp|GALE_METJA|PUTATIVE UDP-glucose 4-epimerase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 DLREGIER 9
DL+EGI+R
Sbjct: 287 DLKEGIKR 294


>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DDLREGIERA 10
D +++GIERA
Sbjct: 4 DVIKKGIERA 13


>sp|RISB_METLZ|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 DDLREGIERA 10
D+L + IERA
Sbjct: 119 DNLEQAIERA 128


>sp|ILVD_METKA|DIHYDROXY-ACID dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 2 DLREGIER 9
D++EG+ER
Sbjct: 5 DIKEGVER 12


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 1 DDLREGIER 9
DDLR IER
Sbjct: 111 DDLRAVIER 119


>sp|ILVD_PYRAB|DIHYDROXY-ACID dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 1 DDLREGIERA 10
D +++GIERA
Sbjct: 4 DVIKKGIERA 13


>sp|ILVD_METB6|DIHYDROXY-ACID dehydratase|Methanoregula boonei (strain DSM 21154

Query: 1 DDLREGIERA 10
D +R+G ERA
Sbjct: 7 DTIRKGYERA 16


>sp|CFBD_METTH|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanothermobacter

Query: 1 DDLREGIERA 10
+DL+E ++RA
Sbjct: 93 EDLKEAVQRA 102


>sp|TRPD_PYRFU|ANTHRANILATE phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DLREGIERA 10
DL+EG+E A
Sbjct: 295 DLKEGVELA 303


>sp|TRPD_PYRAB|ANTHRANILATE phosphoribosyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 DDLREGIE 8
+D REG+E
Sbjct: 294 EDFREGVE 301


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 1 DDLREGIERA 10
DD R+ +ERA
Sbjct: 435 DDARDALERA 444


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DLREGIER 9
DLREG+++
Sbjct: 569 DLREGVKK 576


>sp|TRPD_HALWD|ANTHRANILATE phosphoribosyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DDLREGIERA 10
DD+ G+E+A
Sbjct: 305 DDIETGVEQA 314


>sp|GATE_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanothermobacter thermautotrophicus

Query: 1 DDLREGIER 9
DDL EGI R
Sbjct: 433 DDLLEGIRR 441


>sp|RL23_SACS2|LARGE ribosomal subunit protein uL23|Saccharolobus solfataricus (strain

Query: 1 DDLREGIER 9
DD+++ +ER
Sbjct: 32 DDIKKSVER 40


>sp|TRPD_METKA|ANTHRANILATE phosphoribosyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 DDLREGIERA 10
D L +GI+RA
Sbjct: 309 DSLEKGIQRA 318


>sp|SYE_NATPD|GLUTAMATE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DDLREGIER 9
+DLRE IER
Sbjct: 3 EDLRERIER 11


>sp|GRPE_NATPD|PROTEIN GrpE|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DLREGIE 8
D+REG+E
Sbjct: 122 DIREGVE 128


>sp|AROE_NITMS|SHIKIMATE dehydrogenase (NADP(+))|Nitrosopumilus maritimus (strain SCM1)

Query: 1 DDLREGIE 8
D+L EGIE
Sbjct: 42 DELGEGIE 49


>sp|IF2B_METTP|TRANSLATION initiation factor 2 subunit|Methanothrix thermoacetophila (strain

Query: 1 DDLREGIERA 10
+D EG+ERA
Sbjct: 2 EDYLEGLERA 11




402|Sequence|2006|2015|GIERATSRMI

>sp|RL7A_NITMS|LARGE ribosomal subunit protein eL8|Nitrosopumilus maritimus (strain

Query: 1 GIERATSRMI 10
IER TS++I
Sbjct: 42 AIERGTSKLI 51


>sp|HELS_METTH|ATP-DEPENDENT DNA helicase Hel308|Methanothermobacter thermautotrophicus (strain

Query: 2 IERATSRMI 10
+ER TSR+I
Sbjct: 398 VERTTSRII 406


>sp|CH60_METVS|CHAPERONIN GroEL|Methanococcus vannielii (strain ATCC 35089

Query: 1 GIERATSRMI 10
GIE+AT + +
Sbjct: 118 GIEKATKKAV 127


>sp|RL7A_CENSY|LARGE ribosomal subunit protein eL8|Cenarchaeum symbiosum (strain A)

Query: 1 GIERATSRMI 10
IER TS+++
Sbjct: 42 AIERGTSKLV 51




403|Sequence|2011|2020|TSRMIDRKND

>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 SRMIDRKND 10
+R+ID+KN+
Sbjct: 405 ARIIDKKNN 413


>sp|LONH_THEVO|PUTATIVE lon protease homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 2 SRMIDRKND 10
+++IDRKN+
Sbjct: 405 AKLIDRKNN 413


>sp|DNAG_METTP|DNA primase DnaG|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 TSRMIDRKND 10
T+R+ DR N+
Sbjct: 361 TARLFDRNNN 370


>sp|SYS_SACI7|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 RMIDRKND 10
R +DRKN+
Sbjct: 388 RYVDRKNN 395


>sp|SYS_SACI6|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 RMIDRKND 10
R +DRKN+
Sbjct: 388 RYVDRKNN 395


>sp|SYS_SACI3|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 RMIDRKND 10
R +DRKN+
Sbjct: 388 RYVDRKNN 395


>sp|SYS_SACI2|SERINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 RMIDRKND 10
R +DRKN+
Sbjct: 388 RYVDRKNN 395


>sp|SYS_SACI1|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 RMIDRKND 10
R +DRKN+
Sbjct: 388 RYVDRKNN 395


>sp|SYS_SACI4|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 RMIDRKND 10
R +DRKN+
Sbjct: 388 RYVDRKNN 395


>sp|SYS_SACS2|SERINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 RMIDRKND 10
R +DRKN+
Sbjct: 388 RYVDRKNN 395




404|Sequence|2016|2025|DRKNDQDNNS

***** No hits found ******


405|Sequence|2021|2030|QDNNSSMIDI

>sp|HIS6_METLZ|IMIDAZOLE glycerol phosphate synthase subunit|Methanocorpusculum labreanum

Query: 1 QDNNSSMIDI 10
+DN +MID+
Sbjct: 57 KDNRDTMIDV 66


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 DNNSSMIDI 10
+NNS ++D+
Sbjct: 422 ENNSGIVDV 430


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 DNNSSMIDI 10
+NNS ++D+
Sbjct: 422 ENNSGIVDV 430


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 DNNSSMIDI 10
+NNS ++D+
Sbjct: 422 ENNSGIVDV 430




406|Sequence|2026|2035|SMIDISYKQD

>sp|MOAC_METMA|PROBABLE cyclic pyranopterin monophosphate synthase|Methanosarcina mazei

Query: 2 MIDISYKQD 10
M+DIS K D
Sbjct: 15 MVDISEKND 23


>sp|NFI_PYRHO|ENDONUCLEASE V|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SMIDISYKQD 10
+ +D+SYK++
Sbjct: 28 AAVDVSYKEE 37


>sp|MOAC_ARCFU|PROBABLE cyclic pyranopterin monophosphate synthase|Archaeoglobus fulgidus

Query: 2 MIDISYKQD 10
M+D+S+K D
Sbjct: 13 MVDVSHKDD 21


>sp|NFI_IGNH4|ENDONUCLEASE V|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 IDISYKQD 10
+D+SYK D
Sbjct: 36 LDVSYKGD 43


>sp|UPPP_META3|UNDECAPRENYL-DIPHOSPHATASE aeolicus (strain ATCC BAA-1280

Query: 4 DISYKQ 9
DISYKQ
Sbjct: 132 DISYKQ 137


>sp|PSB2_PYRCJ|PROTEASOME subunit beta 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 SMIDISYKQD 10
++ID SYK D
Sbjct: 145 AIIDASYKPD 154


>sp|MOAC_METJA|PROBABLE cyclic pyranopterin monophosphate synthase|Methanocaldococcus

Query: 2 MIDISYKQD 10
M+DIS K+D
Sbjct: 12 MVDISKKED 20


>sp|DNLI_METJA|DNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MIDISYK 8
+IDISYK
Sbjct: 388 IIDISYK 394




407|Sequence|2031|2040|SYKQDKNGSQ

>sp|SYP_METB6|PROLINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 4 QDKNGSQ 10
+DKNG Q
Sbjct: 246 EDKNGEQ 252


>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 2 YKQDKNG 8
YK D+NG
Sbjct: 394 YKTDENG 400


>sp|PYRG_PYRHO|CTP synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YKQDKNGS 9
YKQ+KN +
Sbjct: 529 YKQEKNAT 536


>sp|XPB1_SULTO|DNA 3'-5' helicase/translocase StoXPB1|Sulfurisphaera tokodaii

Query: 4 QDKNGSQ 10
+DKNGSQ
Sbjct: 29 RDKNGSQ 35




408|Sequence|2036|2045|KNGSQIDAVL

>sp|RNFG_METAC|ION-TRANSLOCATING oxidoreductase complex subunit G|Methanosarcina acetivorans (strain

Query: 1 KNGSQIDAV 9
KNG Q+DA+
Sbjct: 154 KNGGQVDAI 162


>sp|RS4_METTP|SMALL ribosomal subunit protein uS4|Methanothrix thermoacetophila

Query: 1 KNGSQIDAVL 10
K+G+ +DA+L
Sbjct: 87 KDGADLDAIL 96


>sp|SYFA_METMA|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KNGSQIDAVL 10
K+G QIDA +
Sbjct: 35 KSGLQIDAAM 44


>sp|ENO_SULAC|ENOLASE acidocaldarius (strain ATCC 33909

Query: 1 KNGSQIDAV 9
KNG IDAV
Sbjct: 57 KNGRVIDAV 65


>sp|PPM_THEKO|PHOSPHOPENTOMUTASE kodakarensis (strain ATCC BAA-918

Query: 3 GSQIDAVL 10
GS+IDAV+
Sbjct: 276 GSRIDAVV 283


>sp|SYFA_METBF|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 KNGSQIDAVL 10
K+G Q+DA +
Sbjct: 32 KSGLQVDAAM 41


>sp|SYFA_METAC|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 KNGSQIDAVL 10
K+G Q+DA +
Sbjct: 32 KSGLQVDAAM 41




409|Sequence|2041|2050|IDAVLDKLYV

>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 1 IDAVLDKLY 9
IDA LDKLY
Sbjct: 801 IDAELDKLY 809


>sp|RADA_HALSA|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 1 IDAVLDKLYV 10
+DA LDK++V
Sbjct: 186 VDAFLDKIHV 195


>sp|RADA_HALS3|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 1 IDAVLDKLYV 10
+DA LDK++V
Sbjct: 186 VDAFLDKIHV 195


>sp|RL22_THEAC|LARGE ribosomal subunit protein uL22|Thermoplasma acidophilum (strain

Query: 1 IDAVLDKLY 9
IDAV++K Y
Sbjct: 49 IDAVINKTY 57


>sp|ARCC_THEVO|CARBAMATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IDAVLDK 7
IDAV+DK
Sbjct: 200 IDAVIDK 206


>sp|SYE_NITMS|GLUTAMATE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 IDAVLDKL 8
IDA+LD L
Sbjct: 308 IDAILDAL 315


>sp|CBIT_METAC|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 IDAVLDKL 8
IDA+L+KL
Sbjct: 111 IDAILEKL 118


>sp|ARCC_THEAC|CARBAMATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IDAVLDK 7
IDAV+DK
Sbjct: 200 IDAVIDK 206


>sp|DSRB_ARCFU|SULFITE reductase, dissimilatory-type subunit beta|Archaeoglobus fulgidus

Query: 1 IDAVLDKLY 9
+ AV+D+LY
Sbjct: 151 VKAVMDELY 159


>sp|Y2340_ARCFU|UNCHARACTERIZED protein AF_2340|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IDAVLDKLY 9
IDA L++LY
Sbjct: 40 IDAYLERLY 48


>sp|COST_HALSA|TRANSDUCER protein CosT|Halobacterium salinarum (strain ATCC 700922

Query: 2 DAVLDKLYV 10
D+VLD+ YV
Sbjct: 284 DSVLDREYV 292


>sp|COST_HALS3|TRANSDUCER protein CosT|Halobacterium salinarum (strain ATCC 29341

Query: 2 DAVLDKLYV 10
D+VLD+ YV
Sbjct: 284 DSVLDREYV 292


>sp|HIS2_SULAC|PHOSPHORIBOSYL-ATP pyrophosphatase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DAVLDKLY 9
D V+DKLY
Sbjct: 3 DNVIDKLY 10


>sp|CAPPA_METKA|PHOSPHOENOLPYRUVATE carboxylase|Methanopyrus kandleri (strain AV19 /

Query: 1 IDAVLDKLY 9
+DAV+ +LY
Sbjct: 430 LDAVISRLY 438


>sp|IDH_CALNO|ISOCITRATE dehydrogenase [NADP]|Caldococcus noboribetus

Query: 1 IDAVLDKLY 9
+DA +DK Y
Sbjct: 55 LDAAVDKAY 63




410|Sequence|2046|2055|DKLYVCASVE

>sp|PUR2_ARCFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LYVCASVE 10
+YVC SVE
Sbjct: 162 VYVCDSVE 169


>sp|SYM_METTH|METHIONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DKLYVCASVE 10
D L+VCA+ E
Sbjct: 42 DVLFVCATDE 51


>sp|PYRK_ARCFU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Archaeoglobus fulgidus

Query: 1 DKLYVCAS 8
+K+YVC S
Sbjct: 165 EKIYVCGS 172




411|Sequence|2051|2060|CASVEFLMTV

***** No hits found ******


412|Sequence|2056|2065|FLMTVADFFI

>sp|YPZ2_METTF|UNCHARACTERIZED protein ORF2'|Methanothermobacter thermautotrophicus

Query: 2 LMTVADFF 9
L+ VADFF
Sbjct: 183 LVQVADFF 190


>sp|YPV2_METTF|UNCHARACTERIZED protein ORF2|Methanothermobacter thermautotrophicus

Query: 2 LMTVADFF 9
L+ VADFF
Sbjct: 183 LVQVADFF 190


>sp|AATI_PYRAB|A-TYPE ATP synthase subunit I|Pyrococcus abyssi (strain GE5 /

Query: 2 LMTVADFF 9
L+T++DFF
Sbjct: 545 LLTISDFF 552




413|Sequence|2061|2070|ADFFIKAVPQ

>sp|TRM56_ARCFU|TRNA (cytidine(56)-2'-O)-methyltransferase|Archaeoglobus fulgidus

Query: 1 ADFFIKAV 8
DFFIKAV
Sbjct: 56 GDFFIKAV 63


>sp|CFBE_METBF|COENZYME F(430) synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ADFFIKAVPQ 10
ADF ++ VP+
Sbjct: 276 ADFVLETVPE 285


>sp|SYS2_METMP|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ADFFIKAVPQ 10
D F+K VP+
Sbjct: 30 GDIFLKGVPE 39


>sp|SYS2_METM6|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 ADFFIKAVPQ 10
D F+K VP+
Sbjct: 30 GDIFLKGVPE 39


>sp|SYS2_METM7|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 DFFIKAVPQ 10
D F+K VP+
Sbjct: 31 DIFLKGVPE 39


>sp|RL1_THEKO|LARGE ribosomal subunit protein uL1|Thermococcus kodakarensis (strain

Query: 2 DFFIKAVP 9
DFFI A P
Sbjct: 105 DFFIAAAP 112


>sp|CS12F_UNCAX|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f1|Uncultured archaeon

Query: 1 ADFFIK 6
ADFFIK
Sbjct: 408 ADFFIK 413


>sp|SYS2_METM5|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 DFFIKAVPQ 10
D F+K VP+
Sbjct: 31 DIFLKGVPE 39


>sp|SYS2_METVS|TYPE-2 serine--tRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 DFFIKAVPQ 10
D F+K VP+
Sbjct: 31 DIFLKGVPE 39


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 DFFIKAV 8
DFF+KA+
Sbjct: 106 DFFLKAL 112




414|Sequence|2066|2075|KAVPQSPENV

>sp|LEUC_PICTO|3-ISOPROPYLMALATE dehydratase large subunit|Picrophilus torridus (strain ATCC 700027

Query: 2 AVPQSPENV 10
A+P SP+NV
Sbjct: 267 AIPNSPDNV 275


>sp|HACA_METJA|METHANOGEN homoaconitase large subunit|Methanocaldococcus jannaschii (strain

Query: 2 AVPQSPENV 10
AVP P+NV
Sbjct: 275 AVPHHPDNV 283


>sp|AROA_METBU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcoides burtonii (strain DSM

Query: 4 PQSPENV 10
PQ+P+NV
Sbjct: 77 PQTPDNV 83


>sp|PFDA_METTP|PREFOLDIN subunit alpha|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 PQSPEN 9
PQSPEN
Sbjct: 5 PQSPEN 10


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 VPQSPENV 10
VPQ PE++
Sbjct: 410 VPQEPEDL 417


>sp|EF1B_NATPD|ELONGATION factor 1-beta|Natronomonas pharaonis (strain ATCC 35678

Query: 1 KAVPQSPE 8
K +PQSPE
Sbjct: 9 KVMPQSPE 16


>sp|GATE_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus solfataricus (strain ATCC

Query: 1 KAVPQSPEN 9
K VP+SPE+
Sbjct: 453 KLVPESPES 461


>sp|GATE_SACI7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 KAVPQSPEN 9
K VP+SPE+
Sbjct: 453 KFVPESPES 461


>sp|GATE_SACI6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain M.16.4

Query: 1 KAVPQSPEN 9
K VP+SPE+
Sbjct: 453 KFVPESPES 461


>sp|GATE_SACI4|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain M.14.25

Query: 1 KAVPQSPEN 9
K VP+SPE+
Sbjct: 453 KFVPESPES 461


>sp|GATE_SACI3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 KAVPQSPEN 9
K VP+SPE+
Sbjct: 453 KFVPESPES 461


>sp|GATE_SACI2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 KAVPQSPEN 9
K VP+SPE+
Sbjct: 453 KFVPESPES 461


>sp|GATE_SACI1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 1 KAVPQSPEN 9
K VP+SPE+
Sbjct: 453 KFVPESPES 461


>sp|EF1B_METVS|ELONGATION factor 1-beta|Methanococcus vannielii (strain ATCC 35089

Query: 1 KAVPQSPE 8
KA+P SPE
Sbjct: 9 KAMPTSPE 16


>sp|DNAG_METAC|DNA primase DnaG|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KAVPQSP 7
KAVP+SP
Sbjct: 369 KAVPKSP 375




415|Sequence|2071|2080|SPENVAKETQ

>sp|NDK_IGNH4|NUCLEOSIDE diphosphate kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 SPENVAKE 8
SPE VA+E
Sbjct: 119 SPEKVARE 126


>sp|Y1607_METJA|UNCHARACTERIZED glycosyltransferase MJ1607|Methanocaldococcus jannaschii (strain

Query: 1 SPENVAKET 9
S +N+AKET
Sbjct: 369 SWDNIAKET 377


>sp|SYL_PYRAE|LEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SPENVAKET 9
+PE VAK T
Sbjct: 564 TPEEVAKRT 572


>sp|UPPS_HALSA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Halobacterium

Query: 2 PENVAKETQ 10
PE+V ETQ
Sbjct: 291 PEDVEAETQ 299


>sp|SUI1_HALLT|PROTEIN translation factor SUI1 homolog|Halorubrum lacusprofundi (strain

Query: 3 ENVAKETQ 10
E+VAKE+Q
Sbjct: 18 EDVAKESQ 25




416|Sequence|2076|2085|AKETQILPRQ

>sp|Y1276_AERPE|UNCHARACTERIZED protein APE_1276|Aeropyrum pernix (strain ATCC 700893

Query: 1 AKETQILP 8
AK+T ILP
Sbjct: 38 AKQTPILP 45


>sp|Y1804_AERPE|UNCHARACTERIZED protein APE_1804|Aeropyrum pernix (strain ATCC 700893

Query: 1 AKETQILP 8
AK+T ILP
Sbjct: 85 AKQTPILP 92




417|Sequence|2081|2090|ILPRQTATGK

>sp|RL13_NANEQ|LARGE ribosomal subunit protein uL13|Nanoarchaeum equitans (strain

Query: 1 ILPRQTATGK 10
+LPR+TA G+
Sbjct: 84 MLPRKTARGR 93


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 3 PRQTATG 9
P QTATG
Sbjct: 467 PNQTATG 473


>sp|FLAB2_METJA|FLAGELLIN B2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILPRQTATGK 10
++PR T TG
Sbjct: 179 LVPRTTVTGS 188




418|Sequence|2086|2095|TATGKVKIEK

>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 TATGKVKIEK 10
TA GKV +EK
Sbjct: 917 TADGKVSMEK 926


>sp|DHQS_METVS|3-DEHYDROQUINATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 TATGKVKIEK 10
T G++KIEK
Sbjct: 284 TVIGRIKIEK 293


>sp|RPO2N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter

Query: 3 TGKVKIEK 10
TGKV IEK
Sbjct: 61 TGKVSIEK 68


>sp|RPO2N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter

Query: 3 TGKVKIEK 10
TGKV IEK
Sbjct: 55 TGKVTIEK 62


>sp|CMR7B_SACS2|PUTATIVE CRISPR system CMR subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 TATGKVKIEK 10
T TG KIEK
Sbjct: 150 TYTGNTKIEK 159


>sp|DHQS_METST|3-DEHYDROQUINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 GKVKIEK 10
G+VKIEK
Sbjct: 285 GRVKIEK 291


>sp|FTSZ2_PYRHO|CELL division protein FtsZ 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GKVKIEK 10
GKV+IEK
Sbjct: 170 GKVRIEK 176


>sp|RS9_METAC|SMALL ribosomal subunit protein uS9|Methanosarcina acetivorans (strain

Query: 3 TGKVKIEK 10
TGKV+I K
Sbjct: 24 TGKVRINK 31


>sp|DNLI_NITMS|DNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 TGKVKIEK 10
TGK+++EK
Sbjct: 553 TGKMRVEK 560


>sp|PORC_PYRFU|PYRUVATE/KETOISOVALERATE oxidoreductases common subunit gamma|Pyrococcus furiosus (strain

Query: 2 ATGKVKIE 9
ATG VKIE
Sbjct: 144 ATGLVKIE 151


>sp|DHQS_METM6|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C6 /

Query: 4 GKVKIEK 10
G+VKIEK
Sbjct: 287 GRVKIEK 293


>sp|DHQS_METM5|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C5 /

Query: 4 GKVKIEK 10
G+VKIEK
Sbjct: 287 GRVKIEK 293


>sp|RS9_METMA|SMALL ribosomal subunit protein uS9|Methanosarcina mazei (strain ATCC

Query: 3 TGKVKIEK 10
TGKV+I K
Sbjct: 24 TGKVRINK 31


>sp|DHQS_METM7|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C7 /

Query: 4 GKVKIEK 10
G+VKIEK
Sbjct: 287 GRVKIEK 293


>sp|DHQS_META3|3-DEHYDROQUINATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 TGKVKIEK 10
G+VKIEK
Sbjct: 286 VGRVKIEK 293




419|Sequence|2091|2100|VKIEKDDSVR

>sp|Y651_METJA|PUTATIVE protease MJ0651|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IEKDDSVR 10
+EKDDSV+
Sbjct: 79 LEKDDSVK 86


>sp|QUEC2_SULTO|7-CYANO-7-DEAZAGUANINE synthase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 IEKDDSVR 10
IEKD SVR
Sbjct: 42 IEKDGSVR 49


>sp|KPYK_THELN|PYRUVATE kinase|Thermococcus litoralis (strain ATCC 51850

Query: 2 KIEKDDSVR 10
KIE+ D+VR
Sbjct: 221 KIERPDAVR 229


>sp|RL24_METS5|LARGE ribosomal subunit protein uL24|Metallosphaera sedula (strain ATCC

Query: 1 VKIEKDDSVR 10
+ I KDD+VR
Sbjct: 23 IGIRKDDTVR 32


>sp|RADB_METMP|DNA repair and recombination protein|Methanococcus maripaludis (strain

Query: 1 VKIEKDDSVR 10
+KIEK +S+R
Sbjct: 174 IKIEKSESIR 183


>sp|RADB_METMI|DNA repair and recombination protein|Methanococcus maripaludis

Query: 1 VKIEKDDSVR 10
+KIEK +S+R
Sbjct: 174 IKIEKSESIR 183


>sp|SYK_PYRAB|LYSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 KIEKDDSVR 10
KIE D+SVR
Sbjct: 439 KIEIDESVR 447


>sp|Y2239_ARCFU|UNCHARACTERIZED protein AF_2239|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VKIEKDD 7
V+IEKDD
Sbjct: 69 VEIEKDD 75


>sp|RADB_METM7|DNA repair and recombination protein|Methanococcus maripaludis (strain

Query: 1 VKIEKDDSVR 10
+K+EK +SVR
Sbjct: 174 IKLEKAESVR 183


>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 2 KIEKDDSV 9
++EKDD+V
Sbjct: 226 RLEKDDAV 233




420|Sequence|2096|2105|DDSVRPNMTL

>sp|PSB2_SULTO|PROTEASOME subunit beta 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DDSVRPNMTL 10
+D RP+MTL
Sbjct: 152 EDEYRPDMTL 161


>sp|PSB2_PYRNV|PROTEASOME subunit beta 2|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 DDSVRPNMTL 10
D S RP+MT+
Sbjct: 148 DASYRPDMTV 157


>sp|SYH_PYRHO|HISTIDINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DDSVRPNMT 9
D S+RP+MT
Sbjct: 71 DVSLRPDMT 79


>sp|SYH_THEKO|HISTIDINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DDSVRPNMT 9
D S+RP+MT
Sbjct: 73 DISLRPDMT 81


>sp|SYH_PYRFU|HISTIDINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DDSVRPNMT 9
D S+RP+MT
Sbjct: 71 DVSLRPDMT 79


>sp|LYSZ_NITMS|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Nitrosopumilus

Query: 1 DDSVRPNMTL 10
DD V P +TL
Sbjct: 200 DDKVVPKLTL 209


>sp|CDC6_THEKO|ORC1-TYPE DNA replication protein|Thermococcus kodakarensis (strain ATCC

Query: 1 DDSVRPNMTL 10
D+ VRP +TL
Sbjct: 397 DEQVRPLLTL 406




421|Sequence|2101|2110|PNMTLKAMIT

>sp|TMCA_HALVD|TRNA(MET) cytidine acetyltransferase TmcA|Haloferax volcanii (strain ATCC

Query: 1 PNMTLKAM 8
PN+TL+A+
Sbjct: 461 PNLTLRAL 468




422|Sequence|2106|2115|KAMITDPEVV

>sp|MCRG_METVA|METHYL-COENZYME M reductase subunit gamma|Methanococcus vannielii

Query: 2 AMITDPEVV 10
AM TDPEV+
Sbjct: 227 AMRTDPEVI 235


>sp|RL10_HALMA|LARGE ribosomal subunit protein uL10|Haloarcula marismortui (strain ATCC

Query: 1 KAMITDPEVV 10
+A I DPEVV
Sbjct: 258 QAAIEDPEVV 267


>sp|DHQS_METPE|3-DEHYDROQUINATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 MITDPEVV 10
M TDPEV+
Sbjct: 128 MTTDPEVI 135


>sp|RL40_IGNH4|LARGE ribosomal subunit protein eL40|Ignicoccus hospitalis (strain

Query: 4 ITDPEVV 10
+TDPE+V
Sbjct: 3 VTDPELV 9


>sp|PSTB_ARCFU|PHOSPHATE import ATP-binding protein PstB|Archaeoglobus fulgidus (strain ATCC

Query: 1 KAMITDPEVV 10
+A+ T+PEV+
Sbjct: 160 RAIATNPEVI 169


>sp|PURA_METVS|ADENYLOSUCCINATE synthetase|Methanococcus vannielii (strain ATCC 35089

Query: 2 AMITDPEVV 10
++TDPEV+
Sbjct: 73 GVLTDPEVL 81


>sp|PURA_METMP|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 2 AMITDPEVV 10
++TDPEV+
Sbjct: 73 GVLTDPEVL 81


>sp|PURA_METM7|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C7 /

Query: 2 AMITDPEVV 10
++TDPEV+
Sbjct: 73 GVLTDPEVL 81


>sp|PURA_METM6|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C6 /

Query: 2 AMITDPEVV 10
++TDPEV+
Sbjct: 73 GVLTDPEVL 81


>sp|PURA_METM5|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C5 /

Query: 2 AMITDPEVV 10
++TDPEV+
Sbjct: 73 GVLTDPEVL 81


>sp|VHUA_METVO|F420-NON-REDUCING hydrogenase vhu subunit A|Methanococcus voltae

Query: 1 KAMITDPEVV 10
K ++ DPE+V
Sbjct: 342 KELLEDPEIV 351


>sp|RL40_AERPE|LARGE ribosomal subunit protein eL40|Aeropyrum pernix (strain ATCC

Query: 4 ITDPEVV 10
ITDPE+V
Sbjct: 3 ITDPELV 9


>sp|DLDH3_HALMA|DIHYDROLIPOYL dehydrogenase 3|Haloarcula marismortui (strain ATCC 43049

Query: 2 AMITDPEV 9
A+ TDPE+
Sbjct: 359 AVFTDPEI 366


>sp|PSTB1_NATPD|PHOSPHATE import ATP-binding protein PstB|Natronomonas pharaonis (strain ATCC

Query: 1 KAMITDPEVV 10
+A+ DPEVV
Sbjct: 191 RAIAPDPEVV 200


>sp|DLDH_HALVD|DIHYDROLIPOYL dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 2 AMITDPEV 9
A+ TDPE+
Sbjct: 356 AVFTDPEI 363


>sp|DLDH2_HALMA|DIHYDROLIPOYL dehydrogenase 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 AMITDPEV 9
A+ TDPE+
Sbjct: 355 AVFTDPEI 362


>sp|DLDH_HALSA|DIHYDROLIPOYL dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 2 AMITDPEV 9
A+ TDPE+
Sbjct: 355 AVFTDPEI 362


>sp|NOB1_ARCFU|ENDORIBONUCLEASE Nob1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KAMITDPEVV 10
+ M+T PEVV
Sbjct: 22 RNMVTVPEVV 31


>sp|PURA_METTP|ADENYLOSUCCINATE synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 AMITDPEVV 10
A ITDPE++
Sbjct: 144 ADITDPEML 152


>sp|EF1B_METVS|ELONGATION factor 1-beta|Methanococcus vannielii (strain ATCC 35089

Query: 1 KAMITDPEV 9
KAM T PE+
Sbjct: 9 KAMPTSPEI 17




423|Sequence|2111|2120|DPEVVFVASL

>sp|PUS10_NITMS|TRNA pseudouridine synthase Pus10|Nitrosopumilus maritimus (strain SCM1)

Query: 1 DPEVVFVASL 10
DPE+VF +L
Sbjct: 137 DPEIVFTVNL 146


>sp|SYG_THEKO|GLYCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PEVVFVAS 9
PE VF+AS
Sbjct: 71 PEKVFIAS 78


>sp|SYG_PYRAB|GLYCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 PEVVFVAS 9
PE VF+AS
Sbjct: 71 PEQVFIAS 78


>sp|SYG_THEGJ|GLYCINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 PEVVFVAS 9
PE VF+AS
Sbjct: 71 PEKVFIAS 78


>sp|SYG_PYRHO|GLYCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PEVVFVAS 9
PE VF+AS
Sbjct: 71 PEQVFIAS 78


>sp|SYG_PYRFU|GLYCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PEVVFVAS 9
PE VF+AS
Sbjct: 69 PEQVFIAS 76


>sp|UVRB_METBU|UVRABC system protein B|Methanococcoides burtonii (strain DSM 6242

Query: 2 PEVVFVASL 10
PEV FVA L
Sbjct: 513 PEVAFVAIL 521


>sp|RS2_METJA|SMALL ribosomal subunit protein uS2|Methanocaldococcus jannaschii (strain

Query: 1 DPEVVFVA 8
+PEVVF++
Sbjct: 112 EPEVVFIS 119


>sp|GADH_THEAC|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DPEVVFVAS 9
DP ++F AS
Sbjct: 417 DPNIIFEAS 425


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 1 DPEVVFVAS 9
DPE+ FVA+
Sbjct: 659 DPEMRFVAA 667


>sp|Y224_METKA|UPF0284 protein MK0224|Methanopyrus kandleri (strain AV19 /

Query: 1 DPEVVFVAS 9
DPE VFV +
Sbjct: 282 DPERVFVGT 290


>sp|DPOL3_SACS2|DNA polymerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DPEVVFV 7
DP+++FV
Sbjct: 226 DPDIIFV 232


>sp|CDC61_THEAC|PUTATIVE ORC1-type DNA replication protein|Thermoplasma acidophilum

Query: 1 DPEVVFVASL 10
DP+VV+V ++
Sbjct: 49 DPQVVYVNAI 58


>sp|SYG_THESM|GLYCINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 PEVVFVAS 9
PE VF+AS
Sbjct: 71 PEEVFIAS 78


>sp|REG4_PYRHO|UNCHARACTERIZED HTH-type transcriptional regulator PH1013|Pyrococcus horikoshii

Query: 2 PEVVFVAS 9
PEV+FVA
Sbjct: 99 PEVLFVAK 106


>sp|PSB2_AERPE|PROTEASOME subunit beta 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 PEVVFVASL 10
P V FVASL
Sbjct: 99 PSVRFVASL 107


>sp|RS2_ARCFU|SMALL ribosomal subunit protein uS2|Archaeoglobus fulgidus (strain ATCC

Query: 1 DPEVVFV 7
+PEVVFV
Sbjct: 114 EPEVVFV 120


>sp|Y2030_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 2 PEVVFVASL 10
PE VF+ SL
Sbjct: 500 PEEVFIKSL 508


>sp|Y039_METKA|UPF0273 protein MK0039|Methanopyrus kandleri (strain AV19 /

Query: 1 DPEVVFV 7
DPE VFV
Sbjct: 235 DPEKVFV 241




424|Sequence|2116|2125|FVASLTKADA

***** No hits found ******


425|Sequence|2121|2130|TKADAPALTA

>sp|IF1A_METBU|TRANSLATION initiation factor 1A|Methanococcoides burtonii (strain DSM 6242

Query: 1 TKADAPALT 9
+K DAPA+T
Sbjct: 10 SKTDAPAVT 18




426|Sequence|2126|2135|PALTASFQCN

***** No hits found ******


427|Sequence|2131|2140|SFQCNLSLST

>sp|MAP2_SACS2|METHIONINE aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SFQCNLSLST 10
SF CN+S+++
Sbjct: 52 SFPCNISINS 61


>sp|NFI_SULAC|ENDONUCLEASE V|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SFQCNLSL 8
SFQC+L L
Sbjct: 89 SFQCDLIL 96


>sp|MAP2_THEON|METHIONINE aminopeptidase|Thermococcus onnurineus (strain NA1)

Query: 1 SFQCNLSLS 9
+F CNLS++
Sbjct: 50 AFPCNLSIN 58


>sp|MAP2_THEKO|METHIONINE aminopeptidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SFQCNLSLS 9
+F CNLS++
Sbjct: 50 AFPCNLSIN 58


>sp|MAP2_METJA|METHIONINE aminopeptidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SFQCNLSLS 9
+F CN+S++
Sbjct: 52 AFPCNISIN 60


>sp|HCGF_METVS|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus vannielii (strain

Query: 2 FQCNLSLST 10
+CN+++ST
Sbjct: 97 LKCNIAIST 105




428|Sequence|2136|2145|LSLSTSKLEQ

>sp|PROA_HALWD|GAMMA-GLUTAMYL phosphate reductase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LSLSTSKLE 9
L+LSTSK+E
Sbjct: 80 LTLSTSKIE 88




429|Sequence|2141|2150|SKLEQMMEAS

***** No hits found ******


430|Sequence|2146|2155|MMEASVRDLK

>sp|RPO2N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanocaldococcus jannaschii

Query: 2 MEASVRDL 9
MEA +RDL
Sbjct: 78 MEARIRDL 85


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 MMEASVRDLK 10
+ EAS+RDL+
Sbjct: 301 LGEASLRDLR 310


>sp|RL22_SULAC|LARGE ribosomal subunit protein uL22|Sulfolobus acidocaldarius (strain

Query: 2 MEASVRDL 9
++ASVRDL
Sbjct: 24 IDASVRDL 31




431|Sequence|2151|2160|VRDLKVLACP

>sp|DLD_ARCFU|D-LACTATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VRDLKVLACP 10
+RD+ VLA P
Sbjct: 210 MRDMTVLAIP 219


>sp|RL18E_METKA|LARGE ribosomal subunit protein eL18|Methanopyrus kandleri (strain AV19

Query: 1 VRDLKVLAC 9
+RDLK AC
Sbjct: 17 IRDLKKAAC 25


>sp|KCY_METLZ|CYTIDYLATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 DLKVLAC 9
DLK+L C
Sbjct: 92 DLKILLC 98


>sp|MTNA_METAC|PUTATIVE methylthioribose-1-phosphate isomerase|Methanosarcina acetivorans

Query: 2 RDLKVLAC 9
+++KV+AC
Sbjct: 189 KEIKVIAC 196




432|Sequence|2156|2165|VLACPFLREK

>sp|RNP4_THEKO|RIBONUCLEASE P protein component 4|Thermococcus kodakarensis (strain ATCC

Query: 1 VLACPFLREK 10
++ P+LREK
Sbjct: 102 IMRYPYLREK 111


>sp|Y1659_METB6|UPF0212 protein Mboo_1659|Methanoregula boonei (strain DSM 21154

Query: 1 VLACPF 6
+LACPF
Sbjct: 48 MLACPF 53




433|Sequence|2161|2170|FLREKRGKNI

>sp|PIMT_KORCO|PROTEIN-L-ISOASPARTATE O-methyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 FLREKRGKNI 10
L EKRG NI
Sbjct: 192 LLVEKRGNNI 201


>sp|G6PI_METJA|GLUCOSE-6-PHOSPHATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FLREKRGKNI 10
+L +KRGK+I
Sbjct: 229 YLYDKRGKDI 238


>sp|NREA_ARCFU|DNA repair protein NreA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FLREKRGK 8
+LREKRG+
Sbjct: 312 YLREKRGQ 319


>sp|COAD_METAC|PHOSPHOPANTETHEINE adenylyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LREKRGKN 9
+REK+GKN
Sbjct: 109 IREKKGKN 116


>sp|MTHZ_METTF|TYPE II methyltransferase M.MthZI|Methanothermobacter thermautotrophicus

Query: 1 FLREKRGK 8
F+REK GK
Sbjct: 295 FIREKNGK 302


>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FLREKRGKN 9
+ R+KRGK+
Sbjct: 338 YYRKKRGKD 346


>sp|GPMI1_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 FLREKRGK 8
F+REKR K
Sbjct: 283 FVREKRPK 290


>sp|RNH2_THEVO|RIBONUCLEASE HII|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FLREKRGKNI 10
++REK GK +
Sbjct: 115 YIREKSGKEV 124




434|Sequence|2166|2175|RGKNITTVLQ

>sp|RS15_METBF|SMALL ribosomal subunit protein uS15|Methanosarcina barkeri (strain

Query: 2 GKNITTVLQ 10
GK ITT+L+
Sbjct: 68 GKKITTILK 76


>sp|RS15_METMA|SMALL ribosomal subunit protein uS15|Methanosarcina mazei (strain ATCC

Query: 2 GKNITTVLQ 10
GK ITT+L+
Sbjct: 68 GKKITTILK 76


>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 1 RGKNITTV 8
RGKN+T +
Sbjct: 170 RGKNVTLI 177


>sp|NSR_THEKO|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Thermococcus kodakarensis

Query: 1 RGKNITTV 8
RGKN+T +
Sbjct: 170 RGKNVTLI 177


>sp|CFBC_METAC|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina acetivorans

Query: 1 RGKNITTVL 9
RGK I T+L
Sbjct: 52 RGKRIPTIL 60


>sp|RS15_METAC|SMALL ribosomal subunit protein uS15|Methanosarcina acetivorans (strain

Query: 2 GKNITTVLQ 10
GK +TT+L+
Sbjct: 68 GKKVTTILK 76


>sp|FAU1_SACS2|PROBABLE ribonuclease FAU-1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RGKNITT 7
RGK ITT
Sbjct: 139 RGKGITT 145


>sp|DHQS_METM5|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C5 /

Query: 2 GKNITTVLQ 10
G+N+ T+LQ
Sbjct: 305 GENLRTILQ 313


>sp|DHQS_METM6|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C6 /

Query: 2 GKNITTVLQ 10
G+N+ T+LQ
Sbjct: 305 GENLRTILQ 313


>sp|DHQS_METMP|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GKNITTVLQ 10
G+N+ T+LQ
Sbjct: 305 GENLRTILQ 313


>sp|DHQS_METM7|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C7 /

Query: 2 GKNITTVLQ 10
G+N+ T+LQ
Sbjct: 305 GENLRTILQ 313




435|Sequence|2171|2180|TTVLQPCSLF

>sp|PORB_METJA|PYRUVATE synthase subunit PorB|Methanocaldococcus jannaschii (strain ATCC

Query: 3 VLQPCS 8
VLQPC+
Sbjct: 214 VLQPCT 219


>sp|OFOB_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Sulfolobus sp

Query: 3 VLQPCSLF 10
VLQPC +
Sbjct: 193 VLQPCPTY 200


>sp|OFOB_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Saccharolobus solfataricus (Sulfolobus

Query: 3 VLQPCSLF 10
VLQPC +
Sbjct: 193 VLQPCPTY 200


>sp|OFOB1_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 3 VLQPCSLF 10
VLQPC +
Sbjct: 193 VLQPCPTY 200


>sp|SYW_THEVO|TRYPTOPHAN--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 LQPCSLF 10
LQPC ++
Sbjct: 128 LQPCEIY 134


>sp|QUEE_METTH|7-CARBOXY-7-DEAZAGUANINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 VLQPCS 8
V+QPCS
Sbjct: 204 VIQPCS 209




436|Sequence|2176|2185|PCSLFMEKCT

>sp|SEPS_META3|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PCSLFMEK 8
PC +F+EK
Sbjct: 390 PCEVFIEK 397


>sp|SEPS_METVS|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PCSLFMEK 8
PC+L +EK
Sbjct: 388 PCNLKLEK 395




437|Sequence|2181|2190|MEKCTWASGK

>sp|HELS_METAR|ATP-DEPENDENT DNA helicase Hel308|Methanocella arvoryzae (strain DSM 22066

Query: 1 MEKCTW 6
ME CTW
Sbjct: 618 METCTW 623


>sp|PYRC_HALSA|DIHYDROOROTASE salinarum (strain ATCC 700922

Query: 3 KCTWASG 9
K TWASG
Sbjct: 64 KETWASG 70


>sp|MPTA_METMA|GTP cyclohydrolase MptA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MEKCTW 6
MEKCT+
Sbjct: 1 MEKCTF 6


>sp|PYRH_SULAC|URIDYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 6 WASGK 10
WASGK
Sbjct: 102 WASGK 106


>sp|Y418_METJA|UNCHARACTERIZED protein MJ0418|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MEKCTWASGK 10
M KC W K
Sbjct: 44 MYKCAWVCEK 53


>sp|HIS4_METPE|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanosphaerula palustris

Query: 4 CTWAS 8
CTWA+
Sbjct: 148 CTWAT 152


>sp|DADD_METKA|5'-DEOXYADENOSINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 2 EKCTWASG 9
EKC W +
Sbjct: 100 EKCRWGAA 107


>sp|KUP_METBF|PROBABLE potassium transport system protein|Methanosarcina barkeri (strain

Query: 1 MEKCTWASG 9
+EK TW G
Sbjct: 160 IEKITWVFG 168




438|Sequence|2186|2195|WASGKQNINI

>sp|RL31_HALLT|LARGE ribosomal subunit protein eL31|Halorubrum lacusprofundi (strain

Query: 1 WASGKQN 7
WA+G+QN
Sbjct: 60 WANGRQN 66


>sp|FEN_THEPD|FLAP endonuclease 1|Thermofilum pendens (strain DSM 2475

Query: 1 WASGKQNIN 9
WASG Q+ +
Sbjct: 169 WASGSQDFD 177


>sp|Y35K_HALSI|UNCHARACTERIZED 36 kDa protein|Halobacterium salinarum (Halobacterium halobium)

Query: 1 WASGKQ 6
WASG+Q
Sbjct: 248 WASGRQ 253


>sp|Y1029_THESM|UPF0282 protein TSIB_1029|Thermococcus sibiricus (strain DSM 12597

Query: 1 WASGKQNIN 9
W++G +N+N
Sbjct: 223 WSTGLKNLN 231


>sp|RL31_HALWD|LARGE ribosomal subunit protein eL31|Haloquadratum walsbyi (strain DSM

Query: 1 WASGKQN 7
WA G QN
Sbjct: 60 WARGSQN 66


>sp|IF2G_METMA|TRANSLATION initiation factor 2 subunit|Methanosarcina mazei (strain ATCC

Query: 3 SGKQNINI 10
S +QNINI
Sbjct: 201 SAQQNINI 208


>sp|IF2G_METAC|TRANSLATION initiation factor 2 subunit|Methanosarcina acetivorans (strain ATCC

Query: 3 SGKQNINI 10
S +QNINI
Sbjct: 213 SAQQNINI 220


>sp|EF2_IGNH4|ELONGATION factor 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 WASGKQNINI 10
WA ++N NI
Sbjct: 543 WAVDEENFNI 552


>sp|RS7_PICTO|SMALL ribosomal subunit protein uS7|Picrophilus torridus (strain ATCC

Query: 1 WASGKQNIN 9
+++GK+N+N
Sbjct: 42 YSAGKRNVN 50


>sp|Y1681_THEKO|UPF0282 protein TK1681|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WASGKQNIN 9
W +G +N+N
Sbjct: 222 WETGVKNLN 230


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 4 GKQNINI 10
GK+NIN+
Sbjct: 650 GKRNINL 656




439|Sequence|2191|2200|QNINIMVKEF

>sp|DACZ_HALVD|DIADENYLATE cyclase|Haloferax volcanii (strain ATCC 29605

Query: 3 INIMVKEF 10
+N+M+KEF
Sbjct: 182 VNVMLKEF 189


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 INIMVKEF 10
+NIM+ EF
Sbjct: 699 LNIMISEF 706


>sp|GPDA_METTH|GLYCEROL-3-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothermobacter thermautotrophicus

Query: 1 QNINIMVKEF 10
+N+N+ ++EF
Sbjct: 303 ENVNLYIREF 312




440|Sequence|2196|2205|MVKEFIIKIS

***** No hits found ******


441|Sequence|2201|2210|IIKISPIILN

>sp|HMDH_METTH|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 IIKISPIIL 9
++KI PII+
Sbjct: 166 LVKIDPIIV 174


>sp|WECB_METJA|UDP-N-ACETYLGLUCOSAMINE 2-epimerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IIKISPII 8
IIK+SPII
Sbjct: 13 IIKLSPII 20


>sp|MTM7_METJA|PUTATIVE type II methyltransferase M.MjaORF1200P|Methanocaldococcus

Query: 3 KISPIILN 10
K+SP+++N
Sbjct: 97 KLSPVVIN 104


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 ISPIILN 10
ISPI+LN
Sbjct: 115 ISPIVLN 121


>sp|WECB_METMP|UDP-N-ACETYLGLUCOSAMINE 2-epimerase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IIKISPII 8
IIK+SP+I
Sbjct: 14 IIKMSPVI 21


>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 2 IKISPIILN 10
I +SPIIL+
Sbjct: 656 INVSPIILD 664




442|Sequence|2206|2215|PIILNTVLTI

>sp|SPSS2_ARCFU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PIILNTVLT 9
P+ILNT T
Sbjct: 183 PLILNTAYT 191


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PIILNTVL 8
P+IL TVL
Sbjct: 69 PLILGTVL 76




443|Sequence|2211|2220|TVLTIMAALS

>sp|ARLY_METMP|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain DSM 14266

Query: 1 TVLTIMAAL 9
TVLTIM AL
Sbjct: 305 TVLTIMKAL 313


>sp|ARLY_METM7|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C7 /

Query: 1 TVLTIMAAL 9
TVLTIM AL
Sbjct: 305 TVLTIMKAL 313


>sp|ARLY_METM6|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C6 /

Query: 1 TVLTIMAAL 9
TVLTIM AL
Sbjct: 305 TVLTIMKAL 313


>sp|ARLY_METM5|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C5 /

Query: 1 TVLTIMAAL 9
TVLTIM AL
Sbjct: 305 TVLTIMKAL 313


>sp|ARLY_METVS|ARGININOSUCCINATE lyase|Methanococcus vannielii (strain ATCC 35089

Query: 1 TVLTIMAAL 9
TVLTIM AL
Sbjct: 305 TVLTIMKAL 313


>sp|ARLY_META3|ARGININOSUCCINATE lyase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 TVLTIMAAL 9
TVLTI+ AL
Sbjct: 310 TVLTILKAL 318




444|Sequence|2216|2225|MAALSPKTKE

>sp|ARSA_METJA|PUTATIVE arsenical pump-driving ATPase|Methanocaldococcus jannaschii (strain

Query: 1 MAALSPKTKE 10
MAALSP T E
Sbjct: 127 MAALSPGTDE 136


>sp|HIS8_METBU|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 MAALSPKTK 9
+AAL+P TK
Sbjct: 153 LAALTPNTK 161


>sp|RL32_METVS|LARGE ribosomal subunit protein eL32|Methanococcus vannielii (strain

Query: 1 MAALSPKTK 9
+AAL+PKT+
Sbjct: 86 LAALNPKTQ 94


>sp|RL32_METVA|LARGE ribosomal subunit protein eL32|Methanococcus vannielii

Query: 1 MAALSPKTK 9
+AAL+PKT+
Sbjct: 86 LAALNPKTQ 94




445|Sequence|2221|2230|PKTKEDGSKD

>sp|G1PDH_THESM|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus sibiricus (strain DSM 12597

Query: 1 PKTKEDGSKD 10
PKTKE KD
Sbjct: 43 PKTKEIAGKD 52


>sp|G1PDH_PYRFU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PKTKEDGSKD 10
PKTKE KD
Sbjct: 39 PKTKEIAGKD 48


>sp|HCP_METJA|HYDROXYLAMINE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TKEDGSKD 10
KEDG+KD
Sbjct: 331 VKEDGTKD 338


>sp|HCP_METMA|HYDROXYLAMINE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 KEDGSKD 10
KEDG+KD
Sbjct: 333 KEDGTKD 339


>sp|AROD_METMJ|3-DEHYDROQUINATE dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PKTKED 6
PKT+ED
Sbjct: 139 PKTRED 144


>sp|RS6E_SULAC|SMALL ribosomal subunit protein eS6|Sulfolobus acidocaldarius (strain

Query: 1 PKTKED 6
PKTKED
Sbjct: 11 PKTKED 16


>sp|IF2P_IGNH4|PROBABLE translation initiation factor IF-2|Ignicoccus hospitalis (strain

Query: 1 PKTKEDGSK 9
P KEDGS+
Sbjct: 507 PLMKEDGSR 515




446|Sequence|2226|2235|DGSKDTSKEM

>sp|Y3534_METJA|UNCHARACTERIZED protein MJECL34|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DGSKDTSKE 9
+GSKDT+KE
Sbjct: 57 EGSKDTNKE 65


>sp|CARA_THEVO|CARBAMOYL phosphate synthase small chain|Thermoplasma volcanium (strain ATCC

Query: 2 GSKDTSKEM 10
GSK+T KE+
Sbjct: 175 GSKNTLKEL 183


>sp|PUS10_IGNAA|TRNA pseudouridine synthase Pus10|Ignisphaera aggregans (strain DSM

Query: 1 DGSKDTSKEM 10
DG KD+ K++
Sbjct: 55 DGDKDSLKQL 64


>sp|Y3388_METAC|UNCHARACTERIZED serpin-like protein MA_3388|Methanosarcina acetivorans (strain

Query: 1 DGSKDTSKE 9
+G++DT+KE
Sbjct: 91 EGAEDTTKE 99




447|Sequence|2231|2240|TSKEMENLWG

>sp|Y805_METJA|UNCHARACTERIZED protein MJ0805|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TSKEMENLWG 10
T KE+E LW
Sbjct: 44 TGKEIEPLWA 53


>sp|SYFB_KORCO|PHENYLALANINE--TRNA ligase beta subunit|Korarchaeum cryptofilum (strain OPF8)

Query: 1 TSKEMENLW 9
+ +EME LW
Sbjct: 7 SRREMERLW 15


>sp|AATC_METMA|A-TYPE ATP synthase subunit C|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 MENLWG 10
+ENLWG
Sbjct: 4 LENLWG 9


>sp|GATD_NANEQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 KEMENL 8
KEMENL
Sbjct: 45 KEMENL 50


>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 TSKEMENL 8
T KE+ENL
Sbjct: 625 TKKELENL 632


>sp|TAW22_PYRAB|TRNA (guanine(37)-N(1))/4-demethylwyosine(37)-methyltransferase

Query: 3 KEMENLWG 10
+E+E +WG
Sbjct: 135 RELEVIWG 142


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 5 MENLW 9
MENLW
Sbjct: 119 MENLW 123


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 MENLW 9
MENLW
Sbjct: 119 MENLW 123


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 5 MENLW 9
MENLW
Sbjct: 119 MENLW 123


>sp|FEN_THEON|FLAP endonuclease 1|Thermococcus onnurineus (strain NA1)

Query: 4 EMENLWG 10
E+ENL+G
Sbjct: 15 ELENLYG 21


>sp|FEN_THEGJ|FLAP endonuclease 1|Thermococcus gammatolerans (strain DSM 15229

Query: 4 EMENLWG 10
E+ENL+G
Sbjct: 15 ELENLYG 21


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 MENLW 9
MENLW
Sbjct: 119 MENLW 123


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 5 MENLW 9
MENLW
Sbjct: 119 MENLW 123


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 5 MENLW 9
MENLW
Sbjct: 119 MENLW 123


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 5 MENLW 9
MENLW
Sbjct: 119 MENLW 123


>sp|FEN_PYRAB|FLAP endonuclease 1|Pyrococcus abyssi (strain GE5 /

Query: 4 EMENLWG 10
E+ENL+G
Sbjct: 15 ELENLYG 21


>sp|ATRMA_PYRHO|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 4 EMENLWG 10
E+E++WG
Sbjct: 225 EVESVWG 231


>sp|HEM1_METVS|GLUTAMYL-TRNA reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 TSKEMENLW 9
TSK +ENL+
Sbjct: 109 TSKYLENLF 117


>sp|FEN_PYRFU|FLAP endonuclease 1|Pyrococcus furiosus (strain ATCC 43587

Query: 4 EMENLWG 10
E+ENL+G
Sbjct: 15 ELENLYG 21




448|Sequence|2236|2245|ENLWGIKSIN

>sp|PURT_SACS2|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Saccharolobus

Query: 1 ENLWGIKSIN 10
EN+WG K +N
Sbjct: 335 ENVWGPKFLN 344


>sp|ASSY_METTH|ARGININOSUCCINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 ENLWG 5
ENLWG
Sbjct: 178 ENLWG 182


>sp|ASSY_METMP|ARGININOSUCCINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ENLWG 5
ENLWG
Sbjct: 178 ENLWG 182


>sp|ASSY_METKA|ARGININOSUCCINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 ENLWG 5
ENLWG
Sbjct: 177 ENLWG 181


>sp|ASSY_METJA|ARGININOSUCCINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ENLWG 5
ENLWG
Sbjct: 176 ENLWG 180


>sp|ASSY_METVA|ARGININOSUCCINATE synthase|Methanococcus vannielii

Query: 1 ENLWG 5
ENLWG
Sbjct: 178 ENLWG 182


>sp|ASSY_METST|ARGININOSUCCINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ENLWG 5
ENLWG
Sbjct: 173 ENLWG 177


>sp|AATC_METMA|A-TYPE ATP synthase subunit C|Methanosarcina mazei (strain ATCC

Query: 1 ENLWG 5
ENLWG
Sbjct: 5 ENLWG 9


>sp|PYRC_SACS2|DIHYDROOROTASE solfataricus (strain ATCC 35092

Query: 1 ENLWGIKSIN 10
E LW +++IN
Sbjct: 242 ERLWLLQAIN 251


>sp|METK_METS3|S-ADENOSYLMETHIONINE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 ENLWGIKSIN 10
EN+ GIK +N
Sbjct: 330 ENVEGIKQMN 339


>sp|ARGC_METAC|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ENLWGIK 7
EN++GIK
Sbjct: 109 ENIYGIK 115


>sp|ASSY_METS5|ARGININOSUCCINATE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 ENLWG 5
ENLWG
Sbjct: 174 ENLWG 178


>sp|Y3523_METJA|UNCHARACTERIZED protein MJECL23|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ENLWGIKS 8
ENLW K+
Sbjct: 738 ENLWAFKT 745


>sp|XPD_SULAC|ATP-DEPENDENT DNA helicase XPD|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ENLWGIK 7
E +WGIK
Sbjct: 332 EKVWGIK 338


>sp|Y1118_ARCFU|UNCHARACTERIZED protein AF_1118|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ENLWGI 6
+NLWG+
Sbjct: 62 QNLWGV 67


>sp|ASSY_SULTO|ARGININOSUCCINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ENLWG 5
ENLWG
Sbjct: 174 ENLWG 178


>sp|Y2183_ARCFU|UNCHARACTERIZED protein AF_2183|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ENLWGI 6
+NLWG+
Sbjct: 94 QNLWGL 99


>sp|ASSY_SULAC|ARGININOSUCCINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ENLWG 5
ENLWG
Sbjct: 174 ENLWG 178


>sp|ASSY_SACS2|ARGININOSUCCINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ENLWG 5
ENLWG
Sbjct: 174 ENLWG 178


>sp|ASSY_THEVO|ARGININOSUCCINATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ENLWG 5
ENLWG
Sbjct: 172 ENLWG 176




449|Sequence|2241|2250|IKSINDYNTW

>sp|LYSY_IGNH4|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 IKSINDYNTW 10
+K + DY TW
Sbjct: 111 LKRVEDYKTW 120


>sp|MTAP_THEAC|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IKSINDYNTW 10
I SI DY+ W
Sbjct: 203 IASITDYDVW 212


>sp|RL30_PYRAR|LARGE ribosomal subunit protein uL30|Pyrobaculum arsenaticum (strain

Query: 1 IKSINDYNTW 10
I+ +ND+ TW
Sbjct: 55 IQEVNDWVTW 64


>sp|RL30_PYRIL|LARGE ribosomal subunit protein uL30|Pyrobaculum islandicum (strain DSM

Query: 1 IKSINDYNTW 10
I+ +ND+ TW
Sbjct: 56 IQKVNDWVTW 65


>sp|RL30_PYRAE|LARGE ribosomal subunit protein uL30|Pyrobaculum aerophilum (strain

Query: 1 IKSINDYNTW 10
I+ +ND+ TW
Sbjct: 56 IQKVNDWVTW 65


>sp|HEM3_METAR|PROBABLE porphobilinogen deaminase|Methanocella arvoryzae (strain DSM 22066

Query: 1 IKSINDYNTW 10
+K +ND TW
Sbjct: 207 VKELNDETTW 216


>sp|RL30_PYRCJ|LARGE ribosomal subunit protein uL30|Pyrobaculum calidifontis (strain

Query: 1 IKSINDYNTW 10
I+ +ND+ TW
Sbjct: 57 IERVNDWVTW 66


>sp|SYR_PYRAE|ARGININE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 KSINDYNTW 10
K + DYN W
Sbjct: 345 KFVQDYNLW 353


>sp|MTAP_PYRHO|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IKSINDYNTW 10
I ++ DY+ W
Sbjct: 199 ISTVTDYDVW 208


>sp|MTAP_PYRFU|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IKSINDYNTW 10
I ++ DY+ W
Sbjct: 199 ISTVTDYDVW 208


>sp|MTAP_PYRAB|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 1 IKSINDYNTW 10
I ++ DY+ W
Sbjct: 199 ISTVTDYDVW 208


>sp|MTAP_NITMS|S-METHYL-5'-THIOADENOSINE phosphorylase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 IKSINDYNTW 10
I ++ DY+ W
Sbjct: 205 ISTVTDYDVW 214


>sp|RL30_THEKO|LARGE ribosomal subunit protein uL30|Thermococcus kodakarensis (strain

Query: 1 IKSINDYNTW 10
I+ + DY TW
Sbjct: 47 IQKVKDYITW 56


>sp|MTAP_THEKO|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IKSINDYNTW 10
I ++ DY+ W
Sbjct: 199 IATVTDYDVW 208


>sp|SYR_THESM|ARGININE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 4 INDYNTW 10
IND+ TW
Sbjct: 369 INDHKTW 375


>sp|RL30_METKA|LARGE ribosomal subunit protein uL30|Methanopyrus kandleri (strain AV19

Query: 1 IKSINDYNTW 10
++ I DY TW
Sbjct: 39 LQKIKDYVTW 48


>sp|HIS6_ARCFU|IMIDAZOLE glycerol phosphate synthase subunit|Archaeoglobus fulgidus

Query: 1 IKSINDYNT 9
IKSI D NT
Sbjct: 87 IKSIEDINT 95


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 1 IKSINDYN 8
IKSIN+Y+
Sbjct: 1058 IKSINEYH 1065


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain Fusaro

Query: 1 IKSINDYN 8
IKSIN+Y+
Sbjct: 1059 IKSINEYH 1066


>sp|CARB_METBA|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri

Query: 1 IKSINDYN 8
IKSIN+Y+
Sbjct: 382 IKSINEYH 389


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 1 IKSINDYN 8
IKSIN+Y+
Sbjct: 1058 IKSINEYH 1065


>sp|MTAP_CENSY|S-METHYL-5'-THIOADENOSINE phosphorylase|Cenarchaeum symbiosum (strain A)

Query: 1 IKSINDYNTW 10
+ ++ DY+ W
Sbjct: 182 VSTVTDYDAW 191


>sp|DNLI_METMP|DNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KSINDYNTW 10
KSIND NT
Sbjct: 551 KSINDINTL 559


>sp|DNLI_METM7|DNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 KSINDYNTW 10
KSIND NT
Sbjct: 551 KSINDINTL 559


>sp|DNLI_METM5|DNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 KSINDYNTW 10
KSIND NT
Sbjct: 551 KSINDINTL 559


>sp|DNLI_METM6|DNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 KSINDYNTW 10
KSIND NT
Sbjct: 551 KSINDINTL 559


>sp|FTHS_PICTO|FORMATE--TETRAHYDROFOLATE ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 IKSINDYN 8
+KSI+DYN
Sbjct: 406 LKSISDYN 413


>sp|RL30_METJA|LARGE ribosomal subunit protein uL30|Methanocaldococcus jannaschii

Query: 1 IKSINDYNTW 10
++ + DY TW
Sbjct: 46 LQKVKDYVTW 55


>sp|RL30_THEAC|LARGE ribosomal subunit protein uL30|Thermoplasma acidophilum (strain

Query: 1 IKSINDYNTW 10
++ + DY TW
Sbjct: 45 LQKVKDYVTW 54


>sp|Y133_METJA|UNCHARACTERIZED protein MJ0133|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 INDYNTW 10
INDYN++
Sbjct: 184 INDYNSF 190


>sp|RL30_PYRNV|LARGE ribosomal subunit protein uL30|Pyrobaculum neutrophilum (strain

Query: 1 IKSINDYNTW 10
I+ ND+ TW
Sbjct: 53 IEKANDWITW 62


>sp|RL30_THEVO|LARGE ribosomal subunit protein uL30|Thermoplasma volcanium (strain

Query: 1 IKSINDYNTW 10
++ + DY TW
Sbjct: 45 LQKVKDYVTW 54


>sp|IF2P_THESM|PROBABLE translation initiation factor IF-2|Thermococcus sibiricus (strain

Query: 2 KSINDYNTW 10
K I DY W
Sbjct: 440 KLIEDYEAW 448


>sp|IF2P_THEON|PROBABLE translation initiation factor IF-2|Thermococcus onnurineus (strain

Query: 2 KSINDYNTW 10
K I DY W
Sbjct: 440 KLIEDYEAW 448


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 2 KSINDYNTW 10
K I DY W
Sbjct: 987 KLIEDYEAW 995


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 2 KSINDYNTW 10
K I DY W
Sbjct: 887 KLIEDYEAW 895


>sp|IF2P_PYRFU|PROBABLE translation initiation factor IF-2|Pyrococcus furiosus (strain ATCC

Query: 2 KSINDYNTW 10
K I DY W
Sbjct: 827 KLIEDYEAW 835


>sp|MTAP_THEPD|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermofilum pendens (strain DSM 2475

Query: 1 IKSINDYNTW 10
I + DY+ W
Sbjct: 204 IAMVTDYDVW 213


>sp|HELS_CALMQ|ATP-DEPENDENT DNA helicase Hel308|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 KSINDYNTW 10
+ +ND+NT+
Sbjct: 84 EKLNDFNTY 92


>sp|RL30_NANEQ|LARGE ribosomal subunit protein uL30|Nanoarchaeum equitans (strain

Query: 1 IKSINDYNTW 10
I+ DY TW
Sbjct: 47 IQKAKDYITW 56


>sp|RL30_CALMQ|LARGE ribosomal subunit protein uL30|Caldivirga maquilingensis (strain

Query: 1 IKSINDYNTW 10
+KS+ + TW
Sbjct: 61 LKSVESWATW 70


>sp|PYRE_METMA|OROTATE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KSINDYNT 9
KS+ DY T
Sbjct: 104 KSVKDYGT 111


>sp|DNLI_METVS|DNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 KSINDYNTW 10
KSIND N+
Sbjct: 551 KSINDINSL 559


>sp|HIS4_CENSY|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Cenarchaeum symbiosum (strain A)

Query: 1 IKSINDYNTW 10
+KS+ D W
Sbjct: 204 VKSVRDAGAW 213


>sp|Y048_ARCFU|UNCHARACTERIZED protein AF_0048|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KSINDYNTW 10
++I+DY W
Sbjct: 192 ETIDDYEVW 200


>sp|AMZA_SACS2|ARCHAEMETZINCIN solfataricus (strain ATCC 35092

Query: 1 IKSINDYN 8
+KSI+D+N
Sbjct: 64 LKSIHDFN 71


>sp|Y1614_METJA|UNCHARACTERIZED protein MJ1614|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IKSINDYN 8
IKS+ND N
Sbjct: 119 IKSLNDLN 126


>sp|IF2P_METVS|PROBABLE translation initiation factor IF-2|Methanococcus vannielii (strain

Query: 2 KSINDYNTW 10
K + DY W
Sbjct: 440 KLVEDYGAW 448




450|Sequence|2246|2255|DYNTWFLGVD

>sp|MTRH_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanosarcina mazei (strain ATCC

Query: 2 YNTWFLGVD 10
Y WF+G+D
Sbjct: 87 YIEWFVGID 95


>sp|Y1775_ARCFU|PUTATIVE aminohydrolase AF_1775|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DYNTWFLGVD 10
+Y W LG D
Sbjct: 244 EYEKWMLGTD 253


>sp|GYAR_THEKO|GLYOXYLATE reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 WFLGVD 10
WFLG D
Sbjct: 142 WFLGYD 147


>sp|GYAR_PYRHO|GLYOXYLATE reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 WFLGVD 10
WFLG D
Sbjct: 142 WFLGYD 147


>sp|GYAR_PYRAB|GLYOXYLATE reductase|Pyrococcus abyssi (strain GE5 /

Query: 5 WFLGVD 10
WFLG D
Sbjct: 143 WFLGYD 148


>sp|LYSY_IGNH4|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 DYNTWF 6
DY TW+
Sbjct: 116 DYKTWY 121


>sp|RTCA_STAMF|RNA 3'-terminal phosphate cyclase|Staphylothermus marinus (strain ATCC

Query: 2 YNTWFLGVD 10
YN F GVD
Sbjct: 140 YNLRFFGVD 148


>sp|Y544_THEVO|UNCHARACTERIZED solute-binding protein TV0544|Thermoplasma volcanium (strain ATCC

Query: 2 YNTWF 6
YNTWF
Sbjct: 204 YNTWF 208


>sp|VHUA_METVO|F420-NON-REDUCING hydrogenase vhu subunit A|Methanococcus voltae

Query: 3 NTWFLGV 9
+TW+LG+
Sbjct: 220 DTWYLGL 226


>sp|GLYA_CENSY|SERINE hydroxymethyltransferase|Cenarchaeum symbiosum (strain A)

Query: 1 DYNTWF 6
D+N WF
Sbjct: 20 DHNKWF 25


>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain ATCC

Query: 1 DYNTW 5
D+NTW
Sbjct: 226 DFNTW 230


>sp|Y280_STAMF|UNCHARACTERIZED solute-binding protein Smar_0280|Staphylothermus marinus (strain

Query: 1 DYNTWFLG 8
+Y +W++G
Sbjct: 105 NYTSWYIG 112


>sp|EF2_PICTO|ELONGATION factor 2|Picrophilus torridus (strain ATCC 700027

Query: 2 YNTWFLGV 9
YN W L V
Sbjct: 206 YNNWALSV 213


>sp|XAD_HALVD|D-XYLONATE dehydratase|Haloferax volcanii (strain ATCC 29605

Query: 1 DYNTWFL 7
DY+ W+L
Sbjct: 249 DYDVWWL 255


>sp|Y1479_METJA|UNCHARACTERIZED aminotransferase MJ1479|Methanocaldococcus jannaschii (strain ATCC

Query: 2 YNTWFLGVD 10
YN W+ +D
Sbjct: 152 YNYWYPDID 160




451|Sequence|2251|2260|FLGVDTATEI

>sp|RL3_THEON|LARGE ribosomal subunit protein uL3|Thermococcus onnurineus (strain

Query: 1 FLGVDTATEI 10
+LG++TATE+
Sbjct: 90 YLGLETATEV 99


>sp|RL3_THEKO|LARGE ribosomal subunit protein uL3|Thermococcus kodakarensis (strain

Query: 1 FLGVDTATEI 10
+LG++TATE+
Sbjct: 90 YLGLETATEV 99


>sp|RL3_THEGJ|LARGE ribosomal subunit protein uL3|Thermococcus gammatolerans (strain

Query: 1 FLGVDTATEI 10
+LG++TATE+
Sbjct: 90 YLGLETATEV 99


>sp|RL3_PYRFU|LARGE ribosomal subunit protein uL3|Pyrococcus furiosus (strain ATCC

Query: 1 FLGVDTATEI 10
+LG++TATE+
Sbjct: 90 YLGLETATEV 99


>sp|RL3_PYRAB|LARGE ribosomal subunit protein uL3|Pyrococcus abyssi (strain GE5 /

Query: 1 FLGVDTATEI 10
+LG++TATE+
Sbjct: 90 YLGLETATEV 99


>sp|RL3_THESM|LARGE ribosomal subunit protein uL3|Thermococcus sibiricus (strain DSM

Query: 1 FLGVDTATEI 10
+ G++TATE+
Sbjct: 90 YFGLETATEV 99


>sp|RL3_PYRHO|LARGE ribosomal subunit protein uL3|Pyrococcus horikoshii (strain ATCC

Query: 1 FLGVDTATEI 10
+LG++TA E+
Sbjct: 90 YLGLETAGEV 99


>sp|METK_METBF|S-ADENOSYLMETHIONINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 FLGVDTATE 9
F GVD ATE
Sbjct: 97 FEGVDLATE 105


>sp|RFRNP_METJA|RNA-FREE ribonuclease P|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LGVDTATEI 10
LGV T TE+
Sbjct: 26 LGVKTVTEL 34


>sp|FUMC_SACS2|FUMARATE hydratase class II|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LGVDTATEI 10
+G D ATEI
Sbjct: 389 IGYDKATEI 397


>sp|OFOA2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Sulfurisphaera tokodaii (strain

Query: 2 LGVDTATEI 10
LGVDT+ I
Sbjct: 14 LGVDTSANI 22


>sp|TRM14_PYRFU|TRNA (guanine(6)-N2)-methyltransferase|Pyrococcus furiosus (strain ATCC

Query: 1 FLGVDT 6
FLG+DT
Sbjct: 177 FLGIDT 182




452|Sequence|2256|2265|TATEITESFK

>sp|FOLD_PICTO|BIFUNCTIONAL protein FolD|Picrophilus torridus (strain ATCC 700027

Query: 1 TATEITESF 9
TAT+I E+F
Sbjct: 258 TATDIFENF 266


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 ATEITESFK 10
AT++T++FK
Sbjct: 130 ATKMTQNFK 138


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 ATEITESFK 10
AT++T++FK
Sbjct: 130 ATKMTQNFK 138




453|Sequence|2261|2270|TESFKGIEHS

>sp|Y962_METM5|UPF0285 protein MmarC5_0962|Methanococcus maripaludis (strain C5 /

Query: 1 TESFKGIEHS 10
TES+KG+E +
Sbjct: 216 TESYKGVEDT 225


>sp|Y247_METM6|UPF0285 protein MmarC6_0247|Methanococcus maripaludis (strain C6 /

Query: 1 TESFKGIEHS 10
T+S+KG+E++
Sbjct: 216 TDSYKGVENT 225


>sp|RS13_PYRCJ|SMALL ribosomal subunit protein uS13|Pyrobaculum calidifontis (strain DSM

Query: 2 ESFKGIEHS 10
+S+KGI HS
Sbjct: 113 KSWKGIRHS 121


>sp|RS13_PYRAR|SMALL ribosomal subunit protein uS13|Pyrobaculum arsenaticum (strain DSM

Query: 2 ESFKGIEHS 10
+S+KGI HS
Sbjct: 113 KSWKGIRHS 121


>sp|RS13_METTP|SMALL ribosomal subunit protein uS13|Methanothrix thermoacetophila

Query: 1 TESFKGIEH 9
T S+KGI H
Sbjct: 119 TRSYKGIRH 127


>sp|Y642_METMP|UPF0285 protein MMP0642|Methanococcus maripaludis (strain DSM 14266

Query: 1 TESFKGIEHS 10
T+S+KG+E +
Sbjct: 216 TDSYKGVEDT 225


>sp|Y1666_METM7|UPF0285 protein MmarC7_1666|Methanococcus maripaludis (strain C7 /

Query: 1 TESFKGIEHS 10
T+S+KG+E +
Sbjct: 216 TDSYKGVEDT 225


>sp|Y1551_METVS|UPF0285 protein Mevan_1551|Methanococcus vannielii (strain ATCC 35089

Query: 1 TESFKGIEHS 10
T+S+KG+E +
Sbjct: 216 TDSYKGVEDT 225


>sp|RS13_PYRIL|SMALL ribosomal subunit protein uS13|Pyrobaculum islandicum (strain DSM

Query: 2 ESFKGIEHS 10
+S+KG+ HS
Sbjct: 113 KSWKGVRHS 121


>sp|RS13_PYRAE|SMALL ribosomal subunit protein uS13|Pyrobaculum aerophilum (strain ATCC

Query: 2 ESFKGIEHS 10
+S+KG+ HS
Sbjct: 113 KSWKGVRHS 121


>sp|AROK_PYRAB|SHIKIMATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 TESFKGIEHS 10
TES KG++ S
Sbjct: 180 TESLKGVDFS 189


>sp|MT872_AERPE|DNA (cytosine-5-)-methyltransferase M.ApeKI|Aeropyrum pernix (strain

Query: 3 SFKGIEHS 10
SF GI+H+
Sbjct: 302 SFNGIKHA 309


>sp|PHR_HALSA|DEOXYRIBODIPYRIMIDINE photo-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 1 TESFKGIEH 9
+E+FK EH
Sbjct: 302 SENFKAYEH 310


>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 2 ESFKGIEHS 10
E KGIEH+
Sbjct: 704 EKGKGIEHT 712


>sp|RS13_PICTO|SMALL ribosomal subunit protein uS13|Picrophilus torridus (strain ATCC

Query: 3 SFKGIEH 9
S+KGI H
Sbjct: 121 SYKGIRH 127


>sp|SYE_PYRFU|GLUTAMATE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TESFKGIEHS 10
T F+G EHS
Sbjct: 297 THIFRGQEHS 306


>sp|RL30_KORCO|LARGE ribosomal subunit protein uL30|Korarchaeum cryptofilum (strain

Query: 1 TESFKGIEH 9
T+S+KG+ H
Sbjct: 46 TDSYKGMIH 54


>sp|RS13_THEPD|SMALL ribosomal subunit protein uS13|Thermofilum pendens (strain DSM 2475

Query: 2 ESFKGIEH 9
+S+KG+ H
Sbjct: 114 KSYKGVRH 121


>sp|Y2114_ARCFU|UNCHARACTERIZED protein AF_2114|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ESFKGIEHS 10
+ FKG+++S
Sbjct: 218 QQFKGVDYS 226


>sp|RS13_THEVO|SMALL ribosomal subunit protein uS13|Thermoplasma volcanium (strain ATCC

Query: 3 SFKGIEH 9
S+KGI H
Sbjct: 137 SYKGIRH 143


>sp|NIKR2_METAC|PUTATIVE nickel-responsive regulator 2|Methanosarcina acetivorans (strain

Query: 3 SFKGIEHS 10
S KG++HS
Sbjct: 122 SLKGVKHS 129


>sp|RTCA_THEGJ|RNA 3'-terminal phosphate cyclase|Thermococcus gammatolerans (strain

Query: 2 ESFKGIEHS 10
+SF GI H+
Sbjct: 186 DSFAGISHA 194


>sp|RTCA_THESM|RNA 3'-terminal phosphate cyclase|Thermococcus sibiricus (strain DSM

Query: 3 SFKGIEHS 10
SF+GI H+
Sbjct: 187 SFEGISHA 194




454|Sequence|2266|2275|GIEHSLIEEN

>sp|BIOF_META3|PUTATIVE 8-amino-7-oxononanoate synthase|Methanococcus aeolicus (strain ATCC

Query: 3 EHSLIEEN 10
EH+LIEEN
Sbjct: 300 EHNLIEEN 307


>sp|AATC_METTP|A-TYPE ATP synthase subunit C|Methanothrix thermoacetophila (strain DSM

Query: 1 GIEHSLIEEN 10
GIE S+++EN
Sbjct: 228 GIEASIVQEN 237


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 IEHSLIEEN 10
IE+SLIE N
Sbjct: 246 IEYSLIEYN 254


>sp|CARA_METS5|CARBAMOYL phosphate synthase small chain|Metallosphaera sedula (strain ATCC

Query: 1 GIEHSLIEE 9
GI+H ++EE
Sbjct: 192 GIKHGILEE 200


>sp|ATGT_METAC|TRNA-GUANINE(15) transglycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 EHSLIEE 9
EH LIEE
Sbjct: 468 EHPLIEE 474


>sp|LEUC1_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GIEHSLIEE 9
G+EH L+ E
Sbjct: 102 GVEHCLLPE 110


>sp|LEUC1_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus abyssi (strain GE5 /

Query: 1 GIEHSLIEE 9
G+EH L+ E
Sbjct: 101 GVEHCLLPE 109


>sp|AATF_THEAC|A-TYPE ATP synthase subunit F|Thermoplasma acidophilum (strain ATCC

Query: 1 GIEHSLIEE 9
GI+H++I E
Sbjct: 21 GIQHTIIAE 29


>sp|HELS_ARCFU|ATP-DEPENDENT DNA helicase Hel308|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GIEHSLIEEN 10
G+E +++EEN
Sbjct: 274 GLEKAILEEN 283




455|Sequence|2271|2280|LIEENCGVVV

>sp|NURA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 2 IEENCGVV 9
+E+NCGVV
Sbjct: 315 LEDNCGVV 322


>sp|TF2B_METPE|TRANSCRIPTION initiation factor IIB|Methanosphaerula palustris (strain ATCC

Query: 1 LIEENCGVVV 10
L+ +NCG+V+
Sbjct: 55 LVCQNCGLVI 64


>sp|NTPPA_THEKO|DTTP/UTP pyrophosphatase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 EENCGVVV 10
EE+CG VV
Sbjct: 111 EEHCGAVV 118


>sp|TF2B_METMJ|TRANSCRIPTION initiation factor IIB|Methanoculleus marisnigri (strain ATCC

Query: 1 LIEENCGVVV 10
L+ +NCG+V+
Sbjct: 58 LVCQNCGLVL 67


>sp|TF2B2_HALVD|TRANSCRIPTION initiation factor IIB 2|Haloferax volcanii (strain ATCC 29605

Query: 2 IEENCGVVV 10
I E+CG+VV
Sbjct: 54 ICEDCGLVV 62


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 EENCGVV 9
E NCGVV
Sbjct: 952 EFNCGVV 958


>sp|FRHB_METJA|COENZYME F420 hydrogenase subunit beta|Methanocaldococcus jannaschii (strain

Query: 1 LIEENCGV 8
++EE+CGV
Sbjct: 151 IVEEHCGV 158


>sp|FRHA_METVO|COENZYME F420 hydrogenase subunit alpha|Methanococcus voltae

Query: 2 IEENCGVV 9
IE+ CG+V
Sbjct: 78 IEDACGIV 85


>sp|PURA_META3|ADENYLOSUCCINATE synthetase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LIEENCGVV 9
+I+ NCGV+
Sbjct: 98 IIDYNCGVI 106


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LIEENCG 7
++ ENCG
Sbjct: 421 ILNENCG 427


>sp|TSGAD_HALVD|PUTATIVE ABC transporter glucose-binding protein|Haloferax volcanii (strain

Query: 1 LIEENCGVV 9
LI+E C V+
Sbjct: 248 LIDEGCDVI 256


>sp|CMR7B_SACS2|PUTATIVE CRISPR system CMR subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 LIEENCGVV 9
+IE+N G+V
Sbjct: 166 IIEKNTGIV 174


>sp|PURA_METST|ADENYLOSUCCINATE synthetase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 IEENCGVVV 10
IEEN GV +
Sbjct: 312 IEENVGVPI 320




456|Sequence|2276|2285|CGVVVESIQV

>sp|TF2B7_HALSA|TRANSCRIPTION initiation factor IIB 7|Halobacterium salinarum (strain ATCC

Query: 1 CGVVVESIQV 10
CG+VVE Q+
Sbjct: 51 CGLVVEEEQI 60


>sp|Y1514_METJA|PUTATIVE gamma-glutamylcyclotransferase MJ1514|Methanocaldococcus jannaschii

Query: 1 CGVVVES 7
CG++VES
Sbjct: 106 CGILVES 112


>sp|TF2B2_HALVD|TRANSCRIPTION initiation factor IIB 2|Haloferax volcanii (strain ATCC 29605

Query: 1 CGVVVESIQV 10
CG+VVE V
Sbjct: 58 CGLVVEDTVV 67


>sp|RNH2_METAR|RIBONUCLEASE HII|Methanocella arvoryzae (strain DSM 22066

Query: 1 CGVVVE 6
CG++VE
Sbjct: 27 CGIIVE 32




457|Sequence|2281|2290|ESIQVTLECG

>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 4 QVTLECG 10
++TLECG
Sbjct: 689 EITLECG 695


>sp|TTH_ACIAM|TETRATHIONATE hydrolase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 ESIQVTLECG 10
E + VTL CG
Sbjct: 147 EPLGVTLACG 156


>sp|COFH_METJA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocaldococcus jannaschii (strain

Query: 3 IQVTLECG 10
+QV L CG
Sbjct: 300 VQVALRCG 307


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ESIQVTLECG 10
ES++VT+ G
Sbjct: 410 ESVKVTIRAG 419


>sp|AROA_METMJ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanoculleus marisnigri (strain ATCC

Query: 4 QVTLECG 10
+VT++CG
Sbjct: 84 EVTIDCG 90


>sp|Y1865_METTH|UPF0288 protein MTH_1865|Methanothermobacter thermautotrophicus (strain

Query: 1 ESIQVTLEC 9
E Q+T+EC
Sbjct: 317 EGDQITVEC 325




458|Sequence|2286|2295|TLECGLGHRT

>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 1 TLECGLGHR 9
TLECG H+
Sbjct: 691 TLECGFCHQ 699


>sp|RL3_METTH|LARGE ribosomal subunit protein uL3|Methanothermobacter

Query: 2 LECGLGHRT 10
ECGLG +T
Sbjct: 160 FECGLGGKT 168


>sp|CAS6B_METJA|CRISPR-ASSOCIATED endoribonuclease Cas6 2|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LECGLGHR 9
++CGLG +
Sbjct: 222 MDCGLGEK 229


>sp|AOX2_AERPE|HEME-COPPER oxidase subunit 2|Aeropyrum pernix (strain ATCC 700893

Query: 4 CGLGH 8
CG+GH
Sbjct: 192 CGIGH 196


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 ECGLGHR 9
E G GHR
Sbjct: 274 EAGFGHR 280


>sp|PYRK_THEAC|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermoplasma acidophilum

Query: 1 TLECGLG 7
T++CG+G
Sbjct: 197 TMKCGIG 203


>sp|PYRK_THEVO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermoplasma volcanium

Query: 1 TLECGLG 7
T++CG+G
Sbjct: 197 TMKCGIG 203


>sp|HDRB1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit B|Methanosarcina acetivorans

Query: 1 TLECGLG 7
TL CG+G
Sbjct: 210 TLTCGMG 216


>sp|TRM56_AERPE|TRNA (cytidine(56)-2'-O)-methyltransferase|Aeropyrum pernix (strain

Query: 1 TLECGLGHR 9
T+ECG+ R
Sbjct: 67 TVECGVSGR 75




459|Sequence|2291|2300|LGHRTVPLLL

>sp|Y1126_METTH|UNCHARACTERIZED protein MTH_1126|Methanothermobacter thermautotrophicus (strain

Query: 1 LGHRTVP 7
LGHR VP
Sbjct: 152 LGHRVVP 158


>sp|CSA2B_SACS2|CRISPR-ASSOCIATED aCascade subunit Cas7/Csa2 2|Saccharolobus solfataricus (strain

Query: 3 HRTVPLLL 10
HRT P++L
Sbjct: 27 HRTAPVVL 34


>sp|DGGGP_PYRFU|DIGERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LGHRTVPLLL 10
LG RT+P+++
Sbjct: 185 LGARTLPIII 194


>sp|GUAAB_SACI7|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 LGHRTVPLLL 10
LG++ +P+L+
Sbjct: 45 LGNKVIPVLI 54


>sp|GUAAB_SACI6|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 LGHRTVPLLL 10
LG++ +P+L+
Sbjct: 45 LGNKVIPVLI 54


>sp|GUAAB_SACI4|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 LGHRTVPLLL 10
LG++ +P+L+
Sbjct: 45 LGNKVIPVLI 54


>sp|GUAAB_SACI3|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 LGHRTVPLLL 10
LG++ +P+L+
Sbjct: 45 LGNKVIPVLI 54


>sp|GUAAB_SACI2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 LGHRTVPLLL 10
LG++ +P+L+
Sbjct: 45 LGNKVIPVLI 54


>sp|GUAAB_SACI1|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 LGHRTVPLLL 10
LG++ +P+L+
Sbjct: 45 LGNKVIPVLI 54


>sp|DGGGP_PYRHO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LGHRTVPLLL 10
LG RT+P+++
Sbjct: 185 LGARTLPIMI 194


>sp|DGGGP_METBU|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GHRTVPLLL 10
G RT+P+L+
Sbjct: 194 GARTLPILI 202




460|Sequence|2296|2305|VPLLLAESKF

>sp|DHQS_METST|3-DEHYDROQUINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 PLLLAESKF 10
PLLL E+K+
Sbjct: 293 PLLLIEAKY 301


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 VPLLLAESKF 10
+PL++ E KF
Sbjct: 878 IPLVMKEDKF 887


>sp|RS9_THEAC|SMALL ribosomal subunit protein uS9|Thermoplasma acidophilum (strain

Query: 2 PLLLAESK 9
PLL+AE K
Sbjct: 45 PLLIAEDK 52


>sp|HERA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 2 PLLLAESKF 10
P+LLA S+F
Sbjct: 182 PVLLAPSEF 190


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 VPLLLAESKF 10
+P+++ E KF
Sbjct: 878 IPMVMKEDKF 887


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VPLLLAESKF 10
+P+++ E KF
Sbjct: 878 IPMVMKEDKF 887


>sp|DHQS_METMJ|3-DEHYDROQUINATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PLLLAESK 9
PLLL E+K
Sbjct: 262 PLLLVEAK 269


>sp|THSA_SACS2|CHAPERONIN subunit alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VPLLLAES 8
+PL+LAE+
Sbjct: 452 IPLILAET 459


>sp|AATA_NANEQ|A-TYPE ATP synthase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 PLLLAESKF 10
PL++A+ KF
Sbjct: 10 PLVIAKGKF 18




461|Sequence|2301|2310|AESKFSGNIK

>sp|FBPAP_METTM|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanothermobacter marburgensis (strain ATCC

Query: 5 FSGNIK 10
FSGNIK
Sbjct: 101 FSGNIK 106


>sp|CSX1_SACS2|CRISPR system endoribonuclease Csx1|Saccharolobus solfataricus (strain

Query: 3 SKFSGNI 9
S+FSGN+
Sbjct: 280 SRFSGNV 286


>sp|FBPAP_CENSY|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Cenarchaeum symbiosum (strain A)

Query: 5 FSGNIK 10
FSGN+K
Sbjct: 98 FSGNVK 103




462|Sequence|2306|2315|SGNIKNWTSL

>sp|Y086_METJA|UNCHARACTERIZED protein MJ0086|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NIKNWTSL 10
NIKNW +L
Sbjct: 114 NIKNWENL 121


>sp|SYK_METTH|LYSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 NIKNWTSL 10
N+KNW L
Sbjct: 438 NVKNWLRL 445


>sp|AMPD_METJA|ANHYDROMEVALONATE phosphate decarboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 NIKNW 7
NIKNW
Sbjct: 98 NIKNW 102


>sp|Y3512_METJA|UNCHARACTERIZED protein MJECL12|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NIKNWT 8
++KNWT
Sbjct: 99 DVKNWT 104


>sp|CCA_PYRHO|CCA-ADDING enzyme|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 NIKNW 7
N+KNW
Sbjct: 125 NVKNW 129


>sp|MPTA_THEVO|GTP cyclohydrolase MptA|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GNIKNWTSL 10
GNI+N T L
Sbjct: 126 GNIENLTGL 134


>sp|CAS1_PYRHO|CRISPR-ASSOCIATED endonuclease Cas1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 NIKNW 7
N+KNW
Sbjct: 119 NLKNW 123


>sp|ACDG_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit gamma|Archaeoglobus fulgidus

Query: 1 SGNIKNW 7
SG IK W
Sbjct: 455 SGRIKGW 461


>sp|Y3543_METJA|UNCHARACTERIZED protein MJECL43|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NIKNW 7
N+KNW
Sbjct: 219 NLKNW 223




463|Sequence|2311|2320|NWTSLMAAVA

>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 2 WTSLMAAVA 10
WT LMA A
Sbjct: 766 WTKLMAPFA 774


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 NWTSLMAAV 9
+W SL+AAV
Sbjct: 186 SWGSLVAAV 194


>sp|GATD_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcoides burtonii (strain DSM

Query: 2 WTSLMAAVA 10
WT L AVA
Sbjct: 137 WTELAGAVA 145




464|Sequence|2316|2325|MAAVADVTLQ

>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 1 MAAVADVTL 9
+AAVA+VTL
Sbjct: 105 IAAVAEVTL 113


>sp|MTAD_THEON|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus onnurineus (strain NA1)

Query: 1 MAAVADVTLQ 10
M AVA+VTL+
Sbjct: 123 MDAVAEVTLE 132




465|Sequence|2321|2330|DVTLQVHYYN

>sp|DNLI_METST|DNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 VTLQVHYYN 10
+ +Q+H+YN
Sbjct: 257 IRVQIHHYN 265


>sp|CSD_METTH|PROBABLE cysteine desulfurase|Methanothermobacter thermautotrophicus (strain

Query: 2 VTLQVHYYN 10
V +HYYN
Sbjct: 373 VRASIHYYN 381


>sp|CDC6A_HALSA|ORC1-TYPE DNA replication protein 10|Halobacterium salinarum (strain ATCC

Query: 1 DVTLQVHYYN 10
DVTL V Y N
Sbjct: 85 DVTLSVIYLN 94


>sp|SYG_PYRAB|GLYCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 DVTLQVHY 8
D+T+ +HY
Sbjct: 346 DLTVMIHY 353


>sp|SYG_PYRHO|GLYCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DVTLQVHY 8
D+T+ +HY
Sbjct: 346 DLTVMIHY 353


>sp|SYG_PYRFU|GLYCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DVTLQVHY 8
D+T+ +HY
Sbjct: 344 DLTVMIHY 351


>sp|SYG_THESM|GLYCINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 DVTLQVHY 8
D+T+ +HY
Sbjct: 346 DLTVMIHY 353




466|Sequence|2326|2335|VHYYNEIHAV

>sp|HEM1_METS5|GLUTAMYL-TRNA reductase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VHYYNEIH 8
+HY NE+H
Sbjct: 72 LHYLNEVH 79


>sp|PELO_META3|PROTEIN pelota homolog|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VHYYNEIHAV 10
++YYNEI V
Sbjct: 178 INYYNEILEV 187


>sp|TRPA_METKA|TRYPTOPHAN synthase alpha chain|Methanopyrus kandleri (strain AV19 /

Query: 3 YYNEIHA 9
YYN +HA
Sbjct: 101 YYNTLHA 107


>sp|GSA_METAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocella arvoryzae (strain DSM 22066

Query: 4 YNEIHAV 10
YN+IHA+
Sbjct: 180 YNDIHAL 186


>sp|Y035_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 5 NEIHAV 10
NEIHA+
Sbjct: 32 NEIHAI 37


>sp|RS172_METAC|SMALL ribosomal subunit protein uS17B|Methanosarcina acetivorans (strain

Query: 1 VHYYNE 6
V+YYNE
Sbjct: 277 VYYYNE 282


>sp|CSD_METTH|PROBABLE cysteine desulfurase|Methanothermobacter thermautotrophicus (strain

Query: 1 VHYYN 5
+HYYN
Sbjct: 377 IHYYN 381


>sp|TRUD_META3|PROBABLE tRNA pseudouridine synthase D|Methanococcus aeolicus (strain ATCC

Query: 3 YYNEIHAV 10
YYNEI +
Sbjct: 246 YYNEIKMI 253


>sp|KDGA_PICTO|2-DEHYDRO-3-DEOXY-D-GLUCONATE/2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE aldolase|Picrophilus torridus (strain ATCC 700027

Query: 2 HYYNEI 7
HYY EI
Sbjct: 107 HYYKEI 112




467|Sequence|2331|2340|EIHAVWEPLI

>sp|RPO3_METTH|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanothermobacter thermautotrophicus

Query: 3 HAVWEP 8
HA WEP
Sbjct: 150 HAKWEP 155


>sp|GVPL_HALMT|GAS vesicle protein L|Haloferax mediterranei (strain ATCC 33500

Query: 2 IHAVWEP 8
IH WEP
Sbjct: 183 IHLFWEP 189


>sp|GVPD2_HALSA|PROTEIN GvpD2|Halobacterium salinarum (strain ATCC 700922

Query: 4 AVWEPL 9
A WEPL
Sbjct: 250 ATWEPL 255


>sp|RFCS_METHJ|REPLICATION factor C small subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 EIHAVW 6
E HA+W
Sbjct: 3 ETHAIW 8


>sp|RPO3_METJA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanocaldococcus jannaschii (strain

Query: 1 EIHAVWEP 8
++HA W+P
Sbjct: 132 KVHAKWQP 139


>sp|NSR_THEKO|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Thermococcus kodakarensis

Query: 5 VWEPLI 10
VW+PLI
Sbjct: 429 VWDPLI 434


>sp|NCPPR_PYRHO|NAD(P)H coenzyme A polysulfide/persulfide reductase|Pyrococcus horikoshii

Query: 5 VWEPLI 10
VW+PLI
Sbjct: 432 VWDPLI 437


>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 5 VWEPLI 10
VW+PLI
Sbjct: 429 VWDPLI 434


>sp|PYRG_PYRAE|CTP synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 IHAVWEPLI 10
IH W PL+
Sbjct: 170 IHVAWVPLL 178


>sp|Y1574_ARCFU|UNCHARACTERIZED protein AF_1574|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EIHAVWE 7
E HAVW+
Sbjct: 267 ERHAVWD 273




468|Sequence|2336|2345|WEPLIERVEG

>sp|DNLI1_HALWD|DNA ligase 1|Haloquadratum walsbyi (strain DSM 16790

Query: 2 EPLIERVEG 10
EPLIE VEG
Sbjct: 541 EPLIENVEG 549


>sp|IF5A_HALWD|TRANSLATION initiation factor 5A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 WEPLIERVEG 10
W P+IER +G
Sbjct: 66 WVPIIERKQG 75


>sp|DNAK_THEAC|CHAPERONE protein DnaK|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PLIERVEG 10
P++ERV+G
Sbjct: 287 PIVERVKG 294


>sp|RGYRA_METKA|REVERSE gyrase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 1 WEPLIERVEG 10
WEP E VEG
Sbjct: 112 WEPEAEHVEG 121


>sp|AROC_METS3|CHORISMATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 EPLIERVEG 10
EP+ ER++G
Sbjct: 222 EPVFERLDG 230


>sp|SECD_METKA|PROTEIN-EXPORT membrane protein SecD|Methanopyrus kandleri (strain AV19 /

Query: 2 EPLIERVEG 10
P IERVEG
Sbjct: 128 SPRIERVEG 136


>sp|OGG1_PICTO|8-OXOGUANINE DNA glycosylase/AP lyase|Picrophilus torridus (strain ATCC 700027

Query: 2 EPLIERVEG 10
E LIERV+G
Sbjct: 120 EILIERVKG 128


>sp|NK_METJA|NUCLEOSIDE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WEPLIERVE 9
W+ ++ER+E
Sbjct: 290 WDKVVERLE 298


>sp|IF5A_HALLT|TRANSLATION initiation factor 5A|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 WEPLIERVEG 10
W P+I+R +G
Sbjct: 66 WVPIIQRKQG 75


>sp|DNAK_CENSY|CHAPERONE protein DnaK|Cenarchaeum symbiosum (strain A)

Query: 2 EPLIER 7
EPLIER
Sbjct: 386 EPLIER 391


>sp|DNAK_NITMS|CHAPERONE protein DnaK|Nitrosopumilus maritimus (strain SCM1)

Query: 2 EPLIER 7
EPLIER
Sbjct: 387 EPLIER 392


>sp|SYE_NATPD|GLUTAMATE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PLIERVEG 10
P+IERV G
Sbjct: 57 PVIERVNG 64


>sp|NTPPA_METMA|DTTP/UTP pyrophosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 LIERVEG 10
LIER+EG
Sbjct: 161 LIERIEG 167


>sp|CAS6_HALVD|CRISPR-ASSOCIATED endoribonuclease Cas6|Haloferax volcanii (strain ATCC 29605

Query: 2 EPLIERVE 9
EPL +R+E
Sbjct: 192 EPLFDRIE 199


>sp|AMPD_AERPE|ANHYDROMEVALONATE phosphate decarboxylase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PLIERVEG 10
PL+ R+EG
Sbjct: 41 PLLARIEG 48


>sp|SYE_HALMA|GLUTAMATE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PLIERVEG 10
P++ERV G
Sbjct: 57 PVVERVNG 64


>sp|VPB17_ARCFU|PUTATIVE antitoxin VapB13|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WEPLIERVEG 10
E IERVEG
Sbjct: 49 LEKRIERVEG 58


>sp|RL10_METKA|LARGE ribosomal subunit protein uL10|Methanopyrus kandleri (strain AV19

Query: 1 WEPLIERVEG 10
EPL++ +EG
Sbjct: 87 LEPLLDYIEG 96


>sp|MPTE_PYRFU|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WEPLIERV 8
W+P ER+
Sbjct: 6 WKPFYERI 13


>sp|TFE_METMP|TRANSCRIPTION factor E|Methanococcus maripaludis (strain DSM 14266

Query: 1 WEPLIERV 8
W+P +E+V
Sbjct: 80 WKPSLEKV 87




469|Sequence|2341|2350|ERVEGKRQWN

>sp|SECD_METKA|PROTEIN-EXPORT membrane protein SecD|Methanopyrus kandleri (strain AV19 /

Query: 1 ERVEGKRQWN 10
ERVEG QW+
Sbjct: 132 ERVEGGYQWS 141


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 ERVEGKRQWN 10
++VEGK WN
Sbjct: 573 KKVEGKIDWN 582


>sp|FLUC1_METHJ|FLUORIDE-SPECIFIC ion channel FluC 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 VEGKRQWN 10
+ G+R WN
Sbjct: 132 LRGRRSWN 139


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ERVEGKRQ 8
E+VEGK++
Sbjct: 283 EKVEGKKE 290


>sp|SYK_NATPD|LYSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ERVEGKRQW 9
ERVE R W
Sbjct: 436 ERVEKARAW 444


>sp|COOS1_METMA|CARBON monoxide dehydrogenase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ERVEGKRQ 8
E +EGKR+
Sbjct: 616 EHIEGKRK 623


>sp|COOS1_METAC|CARBON monoxide dehydrogenase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 ERVEGKRQ 8
E +EGKR+
Sbjct: 616 EHIEGKRK 623


>sp|TRPE_THEKO|ANTHRANILATE synthase component 1|Thermococcus kodakarensis (strain ATCC

Query: 1 ERVEGKR 7
ERVEG+R
Sbjct: 79 ERVEGRR 85


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 VEGKRQWN 10
+EGKR W+
Sbjct: 499 LEGKRPWD 506


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VEGKRQWN 10
+EGKR W+
Sbjct: 499 LEGKRPWD 506


>sp|GATD_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Archaeoglobus fulgidus (strain ATCC

Query: 1 ERVEGKR 7
ER+EGKR
Sbjct: 13 ERLEGKR 19


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 VEGKRQWN 10
+EGKR W+
Sbjct: 499 LEGKRPWD 506


>sp|NIFD_METTM|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 1 ERVEGKRQW 9
+++ GKR W
Sbjct: 332 DKLRGKRVW 340


>sp|Y1688_HALSA|UNCHARACTERIZED protein VNG_1688C|Halobacterium salinarum (strain ATCC 700922

Query: 4 EGKRQW 9
+G+RQW
Sbjct: 47 DGERQW 52




470|Sequence|2346|2355|KRQWNLRLDV

>sp|PYRC_PYRFU|DIHYDROOROTASE furiosus (strain ATCC 43587

Query: 1 KRQWNLRLD 9
KR+W +R D
Sbjct: 345 KREWTIRAD 353


>sp|HMEA_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 KRQWNLRLDV 10
KR+W + +DV
Sbjct: 40 KRRWAMAVDV 49


>sp|EF2_THESM|ELONGATION factor 2|Thermococcus sibiricus (strain DSM 12597

Query: 1 KRQWNLRLDV 10
K QW + +DV
Sbjct: 449 KEQWGVDVDV 458


>sp|DPOL_ARCFU|DNA polymerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QWNLRLDV 10
+WN+ LDV
Sbjct: 242 RWNIPLDV 249


>sp|EF2_THEGJ|ELONGATION factor 2|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KRQWNLRLDV 10
K +W L +DV
Sbjct: 449 KTEWKLDVDV 458


>sp|EF2_THEON|ELONGATION factor 2|Thermococcus onnurineus (strain NA1)

Query: 1 KRQWNLRLDV 10
K +W L +DV
Sbjct: 449 KTEWKLDVDV 458


>sp|Y1085_PICTO|PUTATIVE adenine deaminase PTO1085|Picrophilus torridus (strain ATCC 700027

Query: 1 KRQWNLRLD 9
K W++RLD
Sbjct: 154 KNFWSVRLD 162


>sp|EF2_PYRAB|ELONGATION factor 2|Pyrococcus abyssi (strain GE5 /

Query: 1 KRQWNLRLDV 10
K+ W + +DV
Sbjct: 449 KKDWGIDIDV 458


>sp|KTHY_AERPE|PUTATIVE thymidylate kinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 RQWNLRLDV 10
R W LRL V
Sbjct: 70 RLWGLRLGV 78




471|Sequence|2351|2360|LRLDVKKNPV

>sp|RS12_METTH|SMALL ribosomal subunit protein uS12|Methanothermobacter

Query: 1 LRLDVKKNPV 10
LRLDVK +P+
Sbjct: 29 LRLDVKADPL 38


>sp|RS12_METS3|SMALL ribosomal subunit protein uS12|Methanobrevibacter smithii (strain

Query: 1 LRLDVKKNPV 10
LRLDVK +P+
Sbjct: 29 LRLDVKADPL 38


>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 LRLDVKKN 8
L++DVKKN
Sbjct: 150 LKMDVKKN 157


>sp|RPO1C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Archaeoglobus fulgidus (strain ATCC

Query: 3 LDVKKNP 9
LDV+KNP
Sbjct: 100 LDVRKNP 106


>sp|NUCS_THEKO|ENDONUCLEASE NucS|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LRLDVKKNPV 10
+RL++++NPV
Sbjct: 84 VRLELRENPV 93


>sp|MOAC_PYRAE|PROBABLE cyclic pyranopterin monophosphate synthase|Pyrobaculum aerophilum

Query: 1 LRLDVKKNPV 10
+ LD+ KNPV
Sbjct: 137 VNLDIVKNPV 146


>sp|SYFA_METAC|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RLDVKKNPV 10
RLD+ NP+
Sbjct: 220 RLDIAPNPL 228


>sp|TRUA_THEON|TRNA pseudouridine synthase A|Thermococcus onnurineus (strain NA1)

Query: 2 RLDVKKNPV 10
RL+ KNPV
Sbjct: 143 RLEPHKNPV 151


>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 1 LRLDVKKNPV 10
L LD+ K+P+
Sbjct: 164 LELDIDKHPI 173


>sp|SYE_SULTO|GLUTAMATE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 LDVKKNP 9
+DVKKNP
Sbjct: 263 IDVKKNP 269


>sp|AROA_PICTO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 LRLDVKKNP 9
L +DV KNP
Sbjct: 286 LYIDVDKNP 294


>sp|GCSH2_SULTO|PROBABLE glycine cleavage system H|Sulfurisphaera tokodaii (strain DSM

Query: 4 DVKKNPV 10
DV+KNPV
Sbjct: 92 DVEKNPV 98


>sp|Y528_PYRFU|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus furiosus (strain

Query: 3 LDVKKNP 9
+DV+KNP
Sbjct: 68 IDVRKNP 74


>sp|RS3_THEKO|SMALL ribosomal subunit protein uS3|Thermococcus kodakarensis (strain

Query: 3 LDVKKNPV 10
LD+KK P+
Sbjct: 33 LDIKKTPL 40


>sp|Y1674_SULAC|UNCHARACTERIZED protein Saci_1674|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LRLDVKKNPV 10
LR+DV+K V
Sbjct: 211 LRIDVEKRKV 220


>sp|RS3_PYRHO|SMALL ribosomal subunit protein uS3|Pyrococcus horikoshii (strain ATCC

Query: 3 LDVKKNPV 10
LD+KK P+
Sbjct: 33 LDIKKTPL 40


>sp|RS3_PYRFU|SMALL ribosomal subunit protein uS3|Pyrococcus furiosus (strain ATCC

Query: 3 LDVKKNPV 10
LD+KK P+
Sbjct: 33 LDIKKTPL 40


>sp|RS3_PYRAB|SMALL ribosomal subunit protein uS3|Pyrococcus abyssi (strain GE5 /

Query: 3 LDVKKNPV 10
LD+KK P+
Sbjct: 33 LDIKKTPL 40


>sp|RS3_META3|SMALL ribosomal subunit protein uS3|Methanococcus aeolicus (strain ATCC

Query: 3 LDVKKNPV 10
+DVKK P+
Sbjct: 32 MDVKKTPI 39


>sp|RS3_THESM|SMALL ribosomal subunit protein uS3|Thermococcus sibiricus (strain DSM

Query: 3 LDVKKNPV 10
LD+KK P+
Sbjct: 33 LDIKKTPL 40


>sp|G3P_METST|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 DVKKNPV 10
DVKK P+
Sbjct: 175 DVKKGPI 181




472|Sequence|2356|2365|KKNPVQDKSL

>sp|DHYS_SACS2|PROBABLE deoxyhypusine synthase|Saccharolobus solfataricus (strain ATCC

Query: 2 KNPVQDKSL 10
KNPV+D +L
Sbjct: 9 KNPVEDITL 17


>sp|ASSY_METJA|ARGININOSUCCINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KNPVQDK 8
KNPV+DK
Sbjct: 204 KNPVEDK 210


>sp|DHYS_SACI7|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 KNPVQDKSL 10
KNPV+D +L
Sbjct: 9 KNPVEDIAL 17


>sp|DHYS_SACI6|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 KNPVQDKSL 10
KNPV+D +L
Sbjct: 9 KNPVEDIAL 17


>sp|DHYS_SACI4|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 KNPVQDKSL 10
KNPV+D +L
Sbjct: 9 KNPVEDIAL 17


>sp|DHYS_SACI3|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.16.27)

Query: 2 KNPVQDKSL 10
KNPV+D +L
Sbjct: 9 KNPVEDIAL 17


>sp|DHYS_SACI2|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain L.S.2.15

Query: 2 KNPVQDKSL 10
KNPV+D +L
Sbjct: 9 KNPVEDIAL 17


>sp|DHYS_SACI1|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 KNPVQDKSL 10
KNPV+D +L
Sbjct: 9 KNPVEDIAL 17


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 KNPVQD 7
KNP+QD
Sbjct: 293 KNPLQD 298


>sp|RS7_METBU|SMALL ribosomal subunit protein uS7|Methanococcoides burtonii (strain

Query: 1 KKNPVQ 6
KKNPVQ
Sbjct: 87 KKNPVQ 92


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 2 KNPVQDKSL 10
K PV+DK L
Sbjct: 709 KKPVEDKKL 717


>sp|CAS2_THEKO|CRISPR-ASSOCIATED endoribonuclease Cas2|Thermococcus kodakarensis (strain ATCC

Query: 1 KKNPVQD 7
+KNP++D
Sbjct: 77 EKNPIED 83




473|Sequence|2361|2370|QDKSLLPGDD

>sp|UPPS_PYRAE|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Pyrobaculum

Query: 2 DKSLLPG 8
D+SLLPG
Sbjct: 107 DRSLLPG 113


>sp|ENO_PICTO|ENOLASE torridus (strain ATCC 700027

Query: 2 DKSLLPGDD 10
DKSL+ GDD
Sbjct: 294 DKSLIVGDD 302


>sp|GLYA_METS3|SERINE hydroxymethyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 2 DKSLLPGDD 10
+K+LLPGD+
Sbjct: 341 NKNLLPGDN 349


>sp|ENO_THEAC|ENOLASE acidophilum (strain ATCC 25905

Query: 2 DKSLLPGDD 10
D+SL+ GDD
Sbjct: 294 DRSLIVGDD 302


>sp|KPRS_AERPE|RIBOSE-PHOSPHATE pyrophosphokinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 QDKSLLPGD 9
QD+ LPG+
Sbjct: 103 QDRVFLPGE 111


>sp|MPGP_PYRHO|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DKSLLPG 8
DK+L+PG
Sbjct: 10 DKTLIPG 16


>sp|ENO_THEVO|ENOLASE volcanium (strain ATCC 51530

Query: 2 DKSLLPGDD 10
DK+++ GDD
Sbjct: 294 DKAMIVGDD 302


>sp|TIAS_THEGJ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus gammatolerans

Query: 3 KSLLPGDD 10
+ LLPGD+
Sbjct: 312 RKLLPGDE 319


>sp|TIAS_PYRHO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrococcus horikoshii (strain

Query: 3 KSLLPGDD 10
+ LLPGD+
Sbjct: 312 RKLLPGDE 319


>sp|PURL_HALMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloarcula marismortui (strain ATCC 43049

Query: 4 SLLPGDD 10
S+LPGDD
Sbjct: 419 SVLPGDD 425


>sp|GGGPS_METB6|GERANYLGERANYLGLYCERYL phosphate synthase|Methanoregula boonei (strain DSM 21154

Query: 2 DKSLLPGD 9
DK L PGD
Sbjct: 15 DKQLGPGD 22


>sp|HISX_PICTO|HISTIDINOL dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 2 DKSLLPGD 9
DKS+ PG+
Sbjct: 47 DKSIKPGE 54




474|Sequence|2366|2375|LPGDDFIPEP

>sp|TRM56_THEVO|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermoplasma volcanium

Query: 1 LPGDDFIPE 9
LP D+++PE
Sbjct: 271 LPPDNYVPE 279


>sp|HEM3_PICTO|PROBABLE porphobilinogen deaminase|Picrophilus torridus (strain ATCC 700027

Query: 4 DDFIPEP 10
DDF+P P
Sbjct: 182 DDFVPAP 188


>sp|TRPB2_SULTO|TRYPTOPHAN synthase beta chain 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GDDFIPEP 10
G DFIP P
Sbjct: 324 GSDFIPAP 331


>sp|TRM56_THEAC|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermoplasma acidophilum

Query: 1 LPGDDFIPE 9
LP D++PE
Sbjct: 271 LPEKDYVPE 279


>sp|SYD_PICTO|ASPARTATE--TRNA(ASP) ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 GDDFIPE 9
GDDF PE
Sbjct: 294 GDDFSPE 300


>sp|GATD_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 1 LPGDDFIPE 9
+PG+D +PE
Sbjct: 400 IPGEDMLPE 408


>sp|TRPB2_SACS2|TRYPTOPHAN synthase beta chain 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GDDFIPEP 10
G DF+P P
Sbjct: 324 GSDFVPPP 331


>sp|TRM56_PICTO|TRNA (cytidine(56)-2'-O)-methyltransferase|Picrophilus torridus (strain

Query: 1 LPGDDFIPE 9
LP D++PE
Sbjct: 270 LPVKDYVPE 278


>sp|TOP6B_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 5 DFIPEP 10
D+IPEP
Sbjct: 223 DYIPEP 228


>sp|Y147_METJA|UNCHARACTERIZED ATP-binding protein MJ0147|Methanocaldococcus jannaschii (strain

Query: 4 DDFIPEP 10
DD IPEP
Sbjct: 327 DDDIPEP 333


>sp|DNLI_METTF|DNA ligase|Methanothermobacter thermautotrophicus (Methanobacterium

Query: 1 LPGDDFIPE 9
LP DD+I E
Sbjct: 291 LPADDYIVE 299


>sp|Y772_ARCFU|UNCHARACTERIZED protein AF_0772|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DDFIPE 9
DDF+PE
Sbjct: 149 DDFLPE 154


>sp|DNLI_METTH|DNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LPGDDFIPE 9
LP DD+I E
Sbjct: 291 LPADDYIVE 299


>sp|SEPS_METBF|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LPGDDFIPE 9
+ GDD +PE
Sbjct: 142 IEGDDLVPE 150


>sp|TRPB2_ARCFU|TRYPTOPHAN synthase beta chain 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GDDFIPEP 10
G DFIP P
Sbjct: 326 GHDFIPPP 333


>sp|PRIL_METAR|DNA primase large subunit PriL|Methanocella arvoryzae (strain DSM

Query: 3 GDDFIPEP 10
DD +P+P
Sbjct: 56 ADDLLPDP 63


>sp|HEM3_NITMS|PROBABLE porphobilinogen deaminase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 LPGDDFIPEP 10
L DDF P P
Sbjct: 182 LSTDDFSPSP 191


>sp|GATD_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanothermobacter thermautotrophicus

Query: 1 LPGDDFIPE 9
+P DD +PE
Sbjct: 385 IPCDDMLPE 393


>sp|DNAK_CENSY|CHAPERONE protein DnaK|Cenarchaeum symbiosum (strain A)

Query: 2 PGDDFIPEP 10
PGDD P+P
Sbjct: 644 PGDDGQPKP 652


>sp|SEPS_METBU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 GDDFIPE 9
GDD +PE
Sbjct: 144 GDDLVPE 150


>sp|SEPS_METTP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 GDDFIPE 9
GDD +PE
Sbjct: 145 GDDLVPE 151


>sp|SEPS_METMA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LPGDDFIPE 9
+ GDD +PE
Sbjct: 142 IEGDDLVPE 150


>sp|SEPS_METAC|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GDDFIPE 9
GDD +PE
Sbjct: 144 GDDLVPE 150


>sp|AROE_SULTO|SHIKIMATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PGDDFIPE 9
P DF+P+
Sbjct: 183 PNPDFVPD 190


>sp|CCA_PYRFU|CCA-ADDING enzyme|Pyrococcus furiosus (strain ATCC 43587

Query: 5 DFIPEP 10
DF+P+P
Sbjct: 427 DFVPKP 432


>sp|FLAB1_ARCFU|PROBABLE flagellin 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PGDDFIPE 9
P DDFI E
Sbjct: 169 PNDDFIIE 176


>sp|SURE_PYRAR|5'-NUCLEOTIDASE SurE|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LPGDDFIPEP 10
L G D PEP
Sbjct: 210 LYGTDLAPEP 219


>sp|DLDH_HALVD|DIHYDROLIPOYL dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 1 LPGDDFIPEP 10
+PG DF EP
Sbjct: 156 IPGFDFGDEP 165


>sp|SYH_HALSA|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LPGDDFIPE 9
LP D+F P+
Sbjct: 329 LPDDEFTPD 337


>sp|SYH_HALS3|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LPGDDFIPE 9
LP D+F P+
Sbjct: 329 LPDDEFTPD 337


>sp|DAPA_ARCFU|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LPGDDFIPEP 10
L GDDF+ P
Sbjct: 181 LSGDDFLTLP 190


>sp|TRPB1_SACS2|TRYPTOPHAN synthase beta chain 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GDDFIPEP 10
G D++P P
Sbjct: 316 GKDYVPPP 323


>sp|IF2G_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 4 DDFIPEP 10
+DFIP P
Sbjct: 196 EDFIPTP 202


>sp|TRPB1_SULTO|TRYPTOPHAN synthase beta chain 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GDDFIPEP 10
G D++P P
Sbjct: 315 GKDYVPPP 322


>sp|IF2G_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 4 DDFIPEP 10
+DFIP P
Sbjct: 196 EDFIPTP 202


>sp|CHEB_THEKO|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Thermococcus

Query: 5 DFIPEP 10
DFIP+P
Sbjct: 106 DFIPKP 111


>sp|FUMC_METAC|FUMARATE hydratase class II|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GDDFIPE 9
GDD++P+
Sbjct: 48 GDDYMPK 54


>sp|RS2_HYPBU|SMALL ribosomal subunit protein uS2|Hyperthermus butylicus (strain DSM

Query: 1 LPGDDFIPEP 10
+P D +PEP
Sbjct: 196 IPQDQDLPEP 205


>sp|CHEB_PYRHO|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Pyrococcus horikoshii

Query: 5 DFIPEP 10
DFIP+P
Sbjct: 107 DFIPKP 112


>sp|CHEB_PYRAB|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Pyrococcus abyssi

Query: 5 DFIPEP 10
DFIP+P
Sbjct: 107 DFIPKP 112


>sp|AGL11_HALVD|LOW-SALT glycan biosynthesis nucleotidyltransferase Agl11|Haloferax volcanii

Query: 4 DDFIPE 9
DDF+PE
Sbjct: 338 DDFLPE 343




475|Sequence|2371|2380|FIPEPQMAIH

>sp|HTPX2_METAC|PROTEASE HtpX homolog 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IPEPQMAI 9
IP+PQ+AI
Sbjct: 92 IPKPQIAI 99


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FIPEPQ 6
+IPEPQ
Sbjct: 588 YIPEPQ 593


>sp|KDAD_SACS2|2-DEHYDRO-3-DEOXY-D-ARABINONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IPEPQMAI 9
+PEP++A+
Sbjct: 146 LPEPELAV 153


>sp|Y1316_METTH|UPF0215 protein MTH_1316|Methanothermobacter thermautotrophicus (strain

Query: 2 IPEPQMAIH 10
IPEP A H
Sbjct: 181 IPEPLRAAH 189


>sp|KDXD_HALVD|PROBABLE 2-keto-3-deoxyxylonate dehydratase|Haloferax volcanii (strain ATCC

Query: 2 IPEPQMAI 9
+PEP++ I
Sbjct: 142 VPEPELGI 149


>sp|PYRC_THEAC|DIHYDROOROTASE acidophilum (strain ATCC 25905

Query: 1 FIPEPQ 6
FIP+PQ
Sbjct: 407 FIPKPQ 412


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 FIPEPQMAIH 10
F P P IH
Sbjct: 107 FAPNPDFVIH 116


>sp|SYE_HYPBU|GLUTAMATE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 FIPEPQMAIH 10
F P P IH
Sbjct: 95 FAPNPDFVIH 104




476|Sequence|2376|2385|QMAIHISSGN

>sp|AMT1_ARCFU|AMMONIUM transporter Amt1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 MAIHISSG 9
M +HISSG
Sbjct: 154 MVVHISSG 161


>sp|COFD_METB6|2-PHOSPHO-L-LACTATE transferase|Methanoregula boonei (strain DSM 21154

Query: 3 AIHISSGN 10
A+HI+ GN
Sbjct: 95 AVHIARGN 102


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 HISSGN 10
H+SSGN
Sbjct: 441 HLSSGN 446




477|Sequence|2381|2390|ISSGNTMNIT

>sp|RPO1C_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus shibatae (strain ATCC

Query: 2 SSGNTMNIT 10
S GNT+NI+
Sbjct: 198 SEGNTLNIS 206


>sp|RPO1C_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 2 SSGNTMNIT 10
S GNT+NI+
Sbjct: 198 SEGNTLNIS 206


>sp|RPO1C_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 2 SSGNTMNIT 10
S GNT+NI+
Sbjct: 198 SEGNTLNIS 206


>sp|RPO1C_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 2 SSGNTMNIT 10
S GNT+NI+
Sbjct: 198 SEGNTLNIS 206


>sp|RPO1C_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 2 SSGNTMNIT 10
S GNT+NI+
Sbjct: 198 SEGNTLNIS 206


>sp|RPO1C_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 2 SSGNTMNIT 10
S GNT+NI+
Sbjct: 198 SEGNTLNIS 206


>sp|RPO1C_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 2 SSGNTMNIT 10
S GNT+NI+
Sbjct: 198 SEGNTLNIS 206


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 1 ISSGNTMNIT 10
+SSG +NIT
Sbjct: 578 LSSGRKINIT 587


>sp|GFCR_METB6|TRANSCRIPTIONAL regulator GfcR|Methanoregula boonei (strain DSM 21154

Query: 1 ISSGNTM 7
I+SGNTM
Sbjct: 151 ITSGNTM 157


>sp|HPRT_METHJ|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 1 ISSGNTMN 8
IS+G TMN
Sbjct: 125 ISTGGTMN 132




478|Sequence|2386|2395|TMNITISKSC

>sp|PELO_ARCFU|PROTEIN pelota homolog|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TMNITISK 8
T+NIT+ K
Sbjct: 96 TLNITVGK 103




479|Sequence|2391|2400|ISKSCLNVFN

>sp|Y04A_METJA|UNCHARACTERIZED protein MJ0047.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SKSCLNVFN 10
SK C N FN
Sbjct: 23 SKYCFNAFN 31


>sp|COBQ_METBF|PROBABLE cobyric acid synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ISKSCLNVF 9
I+ SC N+F
Sbjct: 401 ITDSCRNIF 409


>sp|FTHS_PICTO|FORMATE--TETRAHYDROFOLATE ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 ISKSCLNVFN 10
ISK +NV+N
Sbjct: 428 ISKIAMNVYN 437




480|Sequence|2396|2405|LNVFNNLAKG

>sp|AATA_SACI7|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LNVFNNLAK 9
+NVF NL K
Sbjct: 580 INVFENLEK 588


>sp|YPZ5_METTF|UNCHARACTERIZED protein ORF5'|Methanothermobacter thermautotrophicus

Query: 1 LNVFNNLAKG 10
+NV+NN+A+
Sbjct: 246 VNVYNNIARA 255


>sp|DNAJ_METAC|CHAPERONE protein DnaJ|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LNVFNNLAKG 10
L F NL+KG
Sbjct: 345 LRQFENLSKG 354




481|Sequence|2401|2410|NLAKGFSEGT

>sp|T2M1_METJA|TYPE II restriction enzyme MjaI|Methanocaldococcus jannaschii (strain

Query: 1 NLAKGFSEGT 10
NLA FS+GT
Sbjct: 43 NLANIFSQGT 52


>sp|ALAXM_METMA|ALANYL-TRNA editing protein AlaX-M|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LAKGFSE 8
LAKGFSE
Sbjct: 186 LAKGFSE 192


>sp|ALAXM_METAC|ALANYL-TRNA editing protein AlaX-M|Methanosarcina acetivorans (strain ATCC

Query: 2 LAKGFSE 8
LAKGFSE
Sbjct: 186 LAKGFSE 192


>sp|DEOC_HALMA|DEOXYRIBOSE-PHOSPHATE aldolase|Haloarcula marismortui (strain ATCC 43049

Query: 3 AKGFSEG 9
A GFSEG
Sbjct: 149 ATGFSEG 155


>sp|RL6_METAC|LARGE ribosomal subunit protein uL6|Methanosarcina acetivorans (strain

Query: 1 NLAKGFSEG 9
NL KG +EG
Sbjct: 75 NLVKGVNEG 83


>sp|OTC_METS3|ORNITHINE carbamoyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 2 LAKGFSEG 9
LAK F EG
Sbjct: 20 LAKNFKEG 27


>sp|ALAXM_METBF|ALANYL-TRNA editing protein AlaX-M|Methanosarcina barkeri (strain Fusaro /

Query: 2 LAKGFSE 8
LAKGFS+
Sbjct: 184 LAKGFSD 190


>sp|TRPD_META3|ANTHRANILATE phosphoribosyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 NLAKGFSEG 9
N+AK + EG
Sbjct: 292 NIAKDYKEG 300


>sp|SYH_THEVO|HISTIDINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NLAKGFSE 8
NLAK FSE
Sbjct: 294 NLAKLFSE 301




482|Sequence|2406|2415|FSEGTASTFD

>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SEGTASTFD 10
SEGTA FD
Sbjct: 594 SEGTAVLFD 602


>sp|DNLI1_METMA|DNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FSEGTASTFD 10
+SEG TFD
Sbjct: 430 YSEGMRETFD 439


>sp|NIFK_METBA|NITROGENASE molybdenum-iron protein beta chain|Methanosarcina barkeri

Query: 1 FSEGTA 6
FSEGTA
Sbjct: 71 FSEGTA 76


>sp|DNLI1_METAC|DNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FSEGTASTFD 10
+SEG TFD
Sbjct: 431 YSEGMRETFD 440




483|Sequence|2411|2420|ASTFDYSLKD

>sp|TRMY_PYRFU|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus furiosus

Query: 2 STFDYSLKD 10
+ FDYS+KD
Sbjct: 13 TAFDYSIKD 21


>sp|TRMY_PYRHO|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus horikoshii

Query: 2 STFDYSLKD 10
+ +D+SLKD
Sbjct: 13 TDYDFSLKD 21


>sp|PDAD_NITMS|PYRUVOYL-DEPENDENT arginine decarboxylase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 STFDYSLKD 10
++F+Y+L+D
Sbjct: 23 TSFEYALRD 31


>sp|HELS_METBF|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina barkeri (strain Fusaro /

Query: 2 STFDYSLKD 10
ST DY L+D
Sbjct: 100 STGDYDLRD 108


>sp|RAD50_THEVO|DNA double-strand break repair Rad50|Thermoplasma volcanium (strain

Query: 1 ASTFDYSLKD 10
A+ +YSLKD
Sbjct: 847 ANIIEYSLKD 856




484|Sequence|2416|2425|YSLKDRAPFT

>sp|GCH3_METVS|GTP cyclohydrolase III|Methanococcus vannielii (strain ATCC 35089

Query: 2 SLKDRAPFT 10
S+K+R PFT
Sbjct: 75 SIKNRYPFT 83


>sp|GCH3_METM6|GTP cyclohydrolase III|Methanococcus maripaludis (strain C6 /

Query: 2 SLKDRAPFT 10
S+K+R PFT
Sbjct: 75 SVKNRYPFT 83


>sp|GCH3_METMP|GTP cyclohydrolase III|Methanococcus maripaludis (strain DSM 14266

Query: 2 SLKDRAPFT 10
S+K+R PFT
Sbjct: 75 SVKNRYPFT 83


>sp|GCH3_METM7|GTP cyclohydrolase III|Methanococcus maripaludis (strain C7 /

Query: 2 SLKDRAPFT 10
S+K+R PFT
Sbjct: 75 SVKNRYPFT 83


>sp|COFG_META3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 YSLKDRAP 8
YSLK+R P
Sbjct: 329 YSLKERLP 336


>sp|GCH3_METM5|GTP cyclohydrolase III|Methanococcus maripaludis (strain C5 /

Query: 2 SLKDRAPFT 10
S+K+R PFT
Sbjct: 75 SVKNRYPFT 83


>sp|Y4021_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 3 LKDRAPFT 10
LKDR+P T
Sbjct: 140 LKDRSPHT 147


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LKDRAPFT 10
L DRAP+T
Sbjct: 512 LLDRAPYT 519


>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YSLKDRAPFT 10
Y DR PFT
Sbjct: 61 YYTSDRTPFT 70


>sp|Y2387_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 3 LKDRAPFT 10
LK+RAP T
Sbjct: 135 LKERAPHT 142


>sp|Y945_METJA|UNCHARACTERIZED protein MJ0945|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YSLKDRAPF 9
Y++ D+APF
Sbjct: 52 YNVGDKAPF 60


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 YSLKDRA 7
Y LKDRA
Sbjct: 77 YDLKDRA 83


>sp|Y2580_AERPE|UNCHARACTERIZED protein APE_2580|Aeropyrum pernix (strain ATCC 700893

Query: 1 YSLKDRAPF 9
+ L D+APF
Sbjct: 74 FKLVDKAPF 82




485|Sequence|2421|2430|RAPFTVKNAV

***** No hits found ******


486|Sequence|2426|2435|VKNAVGVPIK

>sp|AATF_METM7|A-TYPE ATP synthase subunit F|Methanococcus maripaludis (strain C7 /

Query: 1 VKNAVGVPIK 10
V+NAVGV IK
Sbjct: 90 VRNAVGVDIK 99


>sp|AATF_METM5|A-TYPE ATP synthase subunit F|Methanococcus maripaludis (strain C5 /

Query: 1 VKNAVGVPIK 10
V+NAVGV IK
Sbjct: 90 VRNAVGVDIK 99


>sp|AATF_METM6|A-TYPE ATP synthase subunit F|Methanococcus maripaludis (strain C6 /

Query: 1 VKNAVGVPIK 10
V+NAVGV IK
Sbjct: 90 VRNAVGVDIK 99


>sp|AATF_METMP|A-TYPE ATP synthase subunit F|Methanococcus maripaludis (strain DSM

Query: 1 VKNAVGVPIK 10
V+NAVGV IK
Sbjct: 90 VRNAVGVDIK 99


>sp|AATF_METVS|A-TYPE ATP synthase subunit F|Methanococcus vannielii (strain ATCC 35089

Query: 1 VKNAVGVPIK 10
V+NAVG+ IK
Sbjct: 90 VRNAVGIDIK 99


>sp|PYLB_METAC|3-METHYLORNITHINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VKNAVGVPI 9
VKN +G+PI
Sbjct: 135 VKNELGLPI 143


>sp|DNLI_AERPE|DNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VKNAVGVPIK 10
VK VGVPI+
Sbjct: 229 VKPQVGVPIR 238


>sp|ENO_PICTO|ENOLASE torridus (strain ATCC 700027

Query: 1 VKNAVGVPI 9
V NA+G+P+
Sbjct: 114 VSNALGIPM 122


>sp|DNLI_HYPBU|DNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 VKNAVGVPIK 10
+K VGVPI+
Sbjct: 233 IKPEVGVPIR 242


>sp|NTPPA_PYRHO|DTTP/UTP pyrophosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 NAVGVPIK 10
N VG+PIK
Sbjct: 165 NVVGLPIK 172


>sp|NTPPA_PYRAB|DTTP/UTP pyrophosphatase|Pyrococcus abyssi (strain GE5 /

Query: 3 NAVGVPIK 10
N VG+PIK
Sbjct: 164 NVVGLPIK 171


>sp|GCST_PYRFU|PROBABLE aminomethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VKNAVGV 7
V+NAVGV
Sbjct: 40 VRNAVGV 46


>sp|DNLI_SULTO|DNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VKNAVGVPIK 10
+K VG+PI+
Sbjct: 225 IKPQVGIPIR 234


>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 3 NAVGVPI 9
NA+GVP+
Sbjct: 166 NALGVPV 172


>sp|CHMU_METJA|CHORISMATE mutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VKNAVGVPI 9
+KN +G+PI
Sbjct: 36 IKNQLGIPI 44


>sp|NTPPA_METMA|DTTP/UTP pyrophosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 NAVGVPI 9
NAVG+P+
Sbjct: 171 NAVGLPL 177


>sp|PURA1_METAC|ADENYLOSUCCINATE synthetase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VKNAVGVPIK 10
++ VGVP+K
Sbjct: 401 IEELVGVPVK 410


>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 1 VKNAVGVPIK 10
+K VGVPI+
Sbjct: 230 IKPEVGVPIR 239


>sp|DNLI_SULAC|DNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VKNAVGVPIK 10
+K VG+PI+
Sbjct: 225 IKPEVGIPIR 234


>sp|THIE_METAC|THIAMINE-PHOSPHATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VKNAVGVPI 9
VKNA+ +P+
Sbjct: 166 VKNAIKIPV 174


>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 VKNAVGVPIK 10
+K VG+PI+
Sbjct: 229 IKPQVGIPIR 238


>sp|RIFK_THEKO|RIBOFLAVIN kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KNAVGVPIK 10
+NA+G P++
Sbjct: 13 RNAIGRPVR 21


>sp|PURL_HALSA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 700922

Query: 3 NAVGVP 8
NA+GVP
Sbjct: 144 NAIGVP 149


>sp|PURL_HALS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 29341

Query: 3 NAVGVP 8
NA+GVP
Sbjct: 144 NAIGVP 149


>sp|ILVD2_METAC|DIHYDROXY-ACID dehydratase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VKNAVGVPIK 10
++NA GVP +
Sbjct: 61 IRNAGGVPFE 70


>sp|NTPPA_METAC|DTTP/UTP pyrophosphatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 NAVGVPI 9
NAVG+P+
Sbjct: 171 NAVGLPL 177


>sp|ILVD_METMA|DIHYDROXY-ACID dehydratase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VKNAVGVPIK 10
++NA GVP +
Sbjct: 61 IRNAGGVPFE 70


>sp|ILVD1_METAC|DIHYDROXY-ACID dehydratase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VKNAVGVPIK 10
++NA GVP +
Sbjct: 61 IRNAGGVPFE 70


>sp|ILVD_METBF|DIHYDROXY-ACID dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VKNAVGVPIK 10
++NA GVP +
Sbjct: 61 IRNAGGVPFE 70


>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VKNAVGVPIK 10
V A+G+P+K
Sbjct: 305 VAKAMGLPVK 314


>sp|PURL_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloquadratum walsbyi (strain DSM 16790

Query: 3 NAVGVP 8
NA+GVP
Sbjct: 158 NAIGVP 163


>sp|PURA_META3|ADENYLOSUCCINATE synthetase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VKNAVGVPIK 10
++ VGVP+K
Sbjct: 312 IEEKVGVPVK 321


>sp|PURL_METS5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Metallosphaera sedula (strain ATCC 51363

Query: 3 NAVGVPI 9
N+VGVP+
Sbjct: 146 NSVGVPV 152


>sp|PDXS_METLZ|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanocorpusculum labreanum

Query: 1 VKNAVGVPI 9
++NAV +P+
Sbjct: 69 IQNAVSIPV 77


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VKNAVGVPI 9
V+ A+GVP+
Sbjct: 906 VEKALGVPV 914




487|Sequence|2431|2440|GVPIKVKPNC

>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 VPIKVKPN 9
VP++VKPN
Sbjct: 783 VPVEVKPN 790


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VPIKVKPN 9
VP++VKPN
Sbjct: 783 VPVEVKPN 790


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VPIKVKPN 9
VP++VKPN
Sbjct: 783 VPVEVKPN 790


>sp|PYRG_THEON|CTP synthase|Thermococcus onnurineus (strain NA1)

Query: 3 PIKVKPN 9
P+K+KPN
Sbjct: 434 PVKIKPN 440


>sp|BPSA_THEKO|N(4)-BIS(AMINOPROPYL)SPERMIDINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VPIKVKPN 9
+PIKVKP+
Sbjct: 305 LPIKVKPS 312


>sp|RS3A_METMA|SMALL ribosomal subunit protein eS1|Methanosarcina mazei (strain ATCC

Query: 1 GVPIKVKPNC 10
G I+VKP C
Sbjct: 114 GFVIRVKPTC 123


>sp|RS3A_METAC|SMALL ribosomal subunit protein eS1|Methanosarcina acetivorans (strain

Query: 1 GVPIKVKPNC 10
G I+VKP C
Sbjct: 114 GYVIRVKPTC 123


>sp|AGLB3_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GVPIKVKPN 9
G+P+K+ P+
Sbjct: 760 GIPVKIAPS 768


>sp|MRE11_NANEQ|DNA double-strand break repair protein|Nanoarchaeum equitans (strain

Query: 3 PIKVKPN 9
PI++KPN
Sbjct: 262 PIEIKPN 268


>sp|RS3A_METBF|SMALL ribosomal subunit protein eS1|Methanosarcina barkeri (strain Fusaro

Query: 1 GVPIKVKPNC 10
G I+VKP C
Sbjct: 114 GYIIRVKPTC 123


>sp|Y202_METJA|UNCHARACTERIZED protein MJ0202|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GVPIKVKPNC 10
G +K+KP C
Sbjct: 10 GESVKIKPEC 19


>sp|PURT_HALWD|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Haloquadratum walsbyi

Query: 1 GVPIKVKP 8
G+P+ VKP
Sbjct: 154 GIPVVVKP 161


>sp|PRIS_SACS2|DNA primase small subunit PriS|Saccharolobus solfataricus (strain ATCC

Query: 1 GVPIKVK 7
G+PIK+K
Sbjct: 304 GIPIKIK 310


>sp|MDH_PICTO|MALATE dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 1 GVPIKVKPN 9
GVPIK+ N
Sbjct: 276 GVPIKIGKN 284


>sp|Y1489_METJA|MCM-LIKE protein MJ1489|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GVPIKVK 7
G+PIKVK
Sbjct: 233 GIPIKVK 239


>sp|MDH_METMP|MALATE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GVPIKVKPN 9
GVP+KV N
Sbjct: 271 GVPVKVGKN 279


>sp|FLAB2_THEKO|FLAGELLIN B2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VPIKVKPN 9
+PIK PN
Sbjct: 404 IPIKAGPN 411


>sp|RS3A_METTP|SMALL ribosomal subunit protein eS1|Methanothrix thermoacetophila (strain

Query: 1 GVPIKVKPNC 10
G ++VKP+C
Sbjct: 113 GYLVRVKPSC 122


>sp|RS19_THEGJ|SMALL ribosomal subunit protein uS19|Thermococcus gammatolerans (strain

Query: 2 VPIKVKP 8
VPI++KP
Sbjct: 91 VPIEIKP 97


>sp|OGG1_SULAC|8-OXOGUANINE DNA glycosylase/AP lyase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 GVPIKVK 7
G+PIK+K
Sbjct: 157 GIPIKLK 163


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 VPIKVKP 8
VP+KV+P
Sbjct: 824 VPVKVEP 830


>sp|ASSY_SACS2|ARGININOSUCCINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GVPIKVKPN 9
G+PIKV+ +
Sbjct: 160 GIPIKVESD 168


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 1 GVPIKVKPN 9
G P+ +KPN
Sbjct: 219 GKPVPLKPN 227


>sp|HEM12_PYRCJ|GLUTAMYL-TRNA reductase 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GVPIKVKPN 9
GVP V PN
Sbjct: 263 GVPSSVVPN 271


>sp|GUAAA_METKA|GMP synthase [glutamine-hydrolyzing] subunit A|Methanopyrus kandleri

Query: 1 GVPIKVKPN 9
GVP ++ PN
Sbjct: 23 GVPAEIIPN 31


>sp|PRIS_SACI7|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 GVPIKVK 7
GVPIK++
Sbjct: 304 GVPIKIE 310


>sp|PRIS_SACI6|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.16.4

Query: 1 GVPIKVK 7
GVPIK++
Sbjct: 304 GVPIKIE 310


>sp|PRIS_SACI4|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.14.25

Query: 1 GVPIKVK 7
GVPIK++
Sbjct: 304 GVPIKIE 310


>sp|PRIS_SACI3|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 GVPIKVK 7
GVPIK++
Sbjct: 304 GVPIKIE 310


>sp|PRIS_SACI2|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 GVPIKVK 7
GVPIK++
Sbjct: 304 GVPIKIE 310


>sp|PRIS_SACI1|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 GVPIKVK 7
GVPIK++
Sbjct: 304 GVPIKIE 310


>sp|FLAB1_AERPE|PROBABLE flagellin 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 GVPIKVKP 8
+PIKV P
Sbjct: 75 AIPIKVSP 82


>sp|IF2P_METVS|PROBABLE translation initiation factor IF-2|Methanococcus vannielii (strain

Query: 4 IKVKPNC 10
IK+ PNC
Sbjct: 470 IKILPNC 476


>sp|IF2P_METM6|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 4 IKVKPNC 10
IK+ PNC
Sbjct: 470 IKILPNC 476


>sp|GUAAA_METM7|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus

Query: 1 GVPIKVKPN 9
GVP K+ PN
Sbjct: 23 GVPAKIVPN 31


>sp|COFG_METKA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 VPIKVKPN 9
VP++V PN
Sbjct: 241 VPVQVPPN 248


>sp|IF2P_METM5|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 4 IKVKPNC 10
IK+ PNC
Sbjct: 470 IKILPNC 476


>sp|KPTA_METKA|PROBABLE RNA 2'-phosphotransferase|Methanopyrus kandleri (strain AV19 /

Query: 3 PIKVKPNC 10
PI+V P C
Sbjct: 3 PIRVCPEC 10


>sp|IF2P_METM7|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 4 IKVKPNC 10
IK+ PNC
Sbjct: 470 IKILPNC 476


>sp|IF2P_METMP|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 4 IKVKPNC 10
IK+ PNC
Sbjct: 470 IKILPNC 476


>sp|FAU1_METKA|PROBABLE ribonuclease FAU-1|Methanopyrus kandleri (strain AV19 /

Query: 1 GVPIKVKPNC 10
G P++V NC
Sbjct: 405 GTPLEVFKNC 414


>sp|RS19_NANEQ|SMALL ribosomal subunit protein uS19|Nanoarchaeum equitans (strain

Query: 2 VPIKVKP 8
VP+++KP
Sbjct: 98 VPVQIKP 104


>sp|RS6E_SULTO|SMALL ribosomal subunit protein eS6|Sulfurisphaera tokodaii (strain DSM

Query: 1 GVPIKVK 7
G+P+KVK
Sbjct: 144 GIPLKVK 150


>sp|RS19_PYRHO|SMALL ribosomal subunit protein uS19|Pyrococcus horikoshii (strain ATCC

Query: 2 VPIKVKP 8
VP+++KP
Sbjct: 90 VPVEIKP 96


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GVPIKVKPN 9
G P+ +KPN
Sbjct: 208 GKPLPLKPN 216


>sp|RS19_PYRFU|SMALL ribosomal subunit protein uS19|Pyrococcus furiosus (strain ATCC

Query: 2 VPIKVKP 8
VP+++KP
Sbjct: 90 VPVEIKP 96


>sp|RS19_PYRAB|SMALL ribosomal subunit protein uS19|Pyrococcus abyssi (strain GE5 /

Query: 2 VPIKVKP 8
VP+++KP
Sbjct: 90 VPVEIKP 96




488|Sequence|2436|2445|VKPNCNLRVM

>sp|COBQ_METST|PROBABLE cobyric acid synthase|Methanosphaera stadtmanae (strain ATCC

Query: 1 VKPNCNL 7
++PNCN+
Sbjct: 67 IEPNCNM 73


>sp|TFE_METJA|TRANSCRIPTION factor E|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PNCNLR 8
PNCN+R
Sbjct: 118 PNCNVR 123


>sp|Y1232_METJA|UNCHARACTERIZED protein MJ1232|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VKPNCNLR 8
+ PNC LR
Sbjct: 183 INPNCTLR 190


>sp|YNH2_METBA|UNCHARACTERIZED protein in nifH2 5'region|Methanosarcina barkeri

Query: 3 PNCNLR 8
PNCN++
Sbjct: 90 PNCNIK 95


>sp|LYSK_SACS2|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PNCNLRVM 10
P CNL+++
Sbjct: 248 PECNLKIV 255


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 4 NCNLRVM 10
NC +RVM
Sbjct: 582 NCGVRVM 588


>sp|RS3_METS5|SMALL ribosomal subunit protein uS3|Metallosphaera sedula (strain ATCC

Query: 2 KPNCNLRVM 10
KP N RVM
Sbjct: 88 KPELNARVM 96


>sp|Y1859_ARCFU|UNCHARACTERIZED protein AF_1859|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VKPNCNL 7
+KP+CN+
Sbjct: 45 LKPSCNI 51


>sp|METE_SULTO|METHIONINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VKPNCNLRVM 10
V P+C L+++
Sbjct: 290 VNPDCGLKLL 299


>sp|METE_SULAC|METHIONINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VKPNCNLRVM 10
V P+C L+++
Sbjct: 291 VNPDCGLKLL 300


>sp|Y1155_METJA|UPF0313 protein MJ1155|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PNCNLRVM 10
PNC+++ M
Sbjct: 487 PNCSIKEM 494


>sp|Y1027_METJA|UNCHARACTERIZED protein MJ1027|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VKPNCNLR 8
++P CN++
Sbjct: 160 IRPRCNIK 167


>sp|MOAA_METM7|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C7 /

Query: 1 VKPNCNLR 8
+ P CNL+
Sbjct: 16 ITPKCNLK 23


>sp|MOAA_METM6|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C6 /

Query: 1 VKPNCNLR 8
+ P CNL+
Sbjct: 16 ITPKCNLK 23


>sp|MOAA_METM5|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C5 /

Query: 1 VKPNCNLR 8
+ P CNL+
Sbjct: 16 ITPKCNLK 23




489|Sequence|2441|2450|NLRVMGFPEK

>sp|ASPGP_PYRAB|PLANT-TYPE L-asparaginase|Pyrococcus abyssi (strain GE5 /

Query: 3 RVMGFPE 9
R+MGFPE
Sbjct: 125 RIMGFPE 131


>sp|ASPGP_PYRHO|PLANT-TYPE L-asparaginase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RVMGFPE 9
R+MGFPE
Sbjct: 125 RLMGFPE 131


>sp|ASPGP_PYRFU|PLANT-TYPE L-asparaginase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RVMGFPE 9
R+MGFPE
Sbjct: 125 RLMGFPE 131


>sp|CBIA_THEVO|COBYRINATE a,c-diamide synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NLRVMGFPEK 10
N+RV+G+ EK
Sbjct: 170 NVRVLGYIEK 179


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 VMGFPEK 10
++GFPEK
Sbjct: 691 ILGFPEK 697


>sp|Y886_HYPBU|UPF0173 metal-dependent hydrolase Hbut_0886|Hyperthermus butylicus (strain

Query: 1 NLRVMGFP 8
NL+VM FP
Sbjct: 107 NLKVMFFP 114


>sp|PGK_NATPD|PHOSPHOGLYCERATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 VMGFPEK 10
V+GFPE+
Sbjct: 160 VVGFPER 166


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 NLRVMGFP 8
N RV+G+P
Sbjct: 447 NARVLGYP 454


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 NLRVMGFP 8
N RV+G+P
Sbjct: 447 NARVLGYP 454


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 NLRVMGFP 8
N RV+G+P
Sbjct: 447 NARVLGYP 454


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 NLRVMGFP 8
N RV+G+P
Sbjct: 447 NARVLGYP 454


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 NLRVMGFP 8
N RV+G+P
Sbjct: 447 NARVLGYP 454


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 NLRVMGFP 8
N RV+G+P
Sbjct: 447 NARVLGYP 454


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NLRVMGFP 8
N RV+G+P
Sbjct: 447 NARVLGYP 454


>sp|Y408_ARCFU|UNCHARACTERIZED protein AF_0408|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LRVMGFPEK 10
LRV FP+K
Sbjct: 3 LRVTTFPDK 11


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 NLRVMGFPE 9
NLR+ G PE
Sbjct: 778 NLRLAGDPE 786


>sp|FAU1_IGNH4|PROBABLE ribonuclease FAU-1|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 LRVMGFPEK 10
L ++GFPE+
Sbjct: 61 LVIIGFPEE 69


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LRVMGFPEK 10
LR MG PE+
Sbjct: 101 LRDMGIPEE 109


>sp|SUI1_HYPBU|PROTEIN translation factor SUI1 homolog|Hyperthermus butylicus (strain

Query: 5 MGFPEK 10
MGFPE+
Sbjct: 92 MGFPEE 97




490|Sequence|2446|2455|GFPEKSDIFD

>sp|PRIS_METB6|DNA primase small subunit PriS|Methanoregula boonei (strain DSM 21154

Query: 1 GFPEKSDIFD 10
FPE++++FD
Sbjct: 52 AFPERTELFD 61


>sp|THIC_HALMA|PHOSPHOMETHYLPYRIMIDINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GFPEKSDIFD 10
G PEKSD+ D
Sbjct: 329 GLPEKSDVRD 338


>sp|SYR_METHJ|ARGININE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PEKSDIFD 10
PEKS +FD
Sbjct: 422 PEKSTVFD 429


>sp|SYR_METB6|ARGININE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 PEKSDIFD 10
PEKS +FD
Sbjct: 425 PEKSTVFD 432


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 GFPEKSDIFD 10
GFP K+D F+
Sbjct: 531 GFPAKTDEFE 540


>sp|SYR_METPE|ARGININE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 PEKSDIFD 10
PEKS +FD
Sbjct: 425 PEKSTVFD 432


>sp|SYR_METBU|ARGININE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PEKSDIFD 10
PEKS +FD
Sbjct: 425 PEKSTVFD 432


>sp|Y1526_METAR|PUTATIVE HTH-type transcriptional regulatory protein|Methanocella arvoryzae

Query: 2 FPEKSDIFD 10
F ++SD+FD
Sbjct: 302 FDDRSDLFD 310


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GFPEKSDIFD 10
GFP + + FD
Sbjct: 531 GFPREREAFD 540


>sp|Y1051_METJA|UNCHARACTERIZED protein MJ1051|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GFPEKS 6
GFPEKS
Sbjct: 38 GFPEKS 43


>sp|Y1598_METJA|UPF0284 protein MJ1598|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GFPEKSDIFD 10
G EKS +FD
Sbjct: 198 GINEKSSVFD 207


>sp|WECC_METJA|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PEKSDIF 9
PEK+D+F
Sbjct: 80 PEKADVF 86


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 1 GFPEKSDI 8
G PEKSD+
Sbjct: 599 GRPEKSDL 606


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 GFPEKSDI 8
G PEKSD+
Sbjct: 592 GRPEKSDL 599


>sp|NIFK_METBA|NITROGENASE molybdenum-iron protein beta chain|Methanosarcina barkeri

Query: 2 FPEKSDIF 9
FP+ +D+F
Sbjct: 200 FPDTTDVF 207


>sp|Y1048_THEON|UPF0179 protein TON_1048|Thermococcus onnurineus (strain NA1)

Query: 3 PEKSDIF 9
PEK D+F
Sbjct: 106 PEKRDLF 112


>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PEKSDIFD 10
PEK +FD
Sbjct: 620 PEKEKLFD 627


>sp|LONB_THEVO|ARCHAEAL Lon protease|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PEKSDIFD 10
PEK +FD
Sbjct: 620 PEKDKLFD 627


>sp|HUTU_HALSA|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 2 FPEKSDI 8
FPEK D+
Sbjct: 404 FPEKDDL 410


>sp|HUTU_HALS3|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 29341

Query: 2 FPEKSDI 8
FPEK D+
Sbjct: 404 FPEKDDL 410


>sp|Y239_METJA|UNCHARACTERIZED protein MJ0239|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FPEKSDI 8
FP+K DI
Sbjct: 138 FPQKKDI 144


>sp|SYFB_METPE|PHENYLALANINE--TRNA ligase beta subunit|Methanosphaerula palustris (strain ATCC

Query: 2 FPEKSDIF 9
FP++ D+F
Sbjct: 46 FPDRPDLF 53


>sp|RS6E_THEAC|SMALL ribosomal subunit protein eS6|Thermoplasma acidophilum (strain

Query: 1 GFPEKSDI 8
GFP +SD+
Sbjct: 56 GFPMRSDL 63


>sp|DNLI_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 FPEKSDIF 9
FP SD+F
Sbjct: 370 FPADSDVF 377


>sp|HIS81_ARCFU|HISTIDINOL-PHOSPHATE aminotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GFPEKSDIF 9
G PE++D+F
Sbjct: 301 GRPEENDMF 309


>sp|SYW_THEVO|TRYPTOPHAN--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GFPEKSDIFD 10
G PEK +FD
Sbjct: 356 GEPEKCPVFD 365


>sp|ARGC_METJA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GFPEKSDIFD 10
GF EK +FD
Sbjct: 327 GFDEKEGLFD 336


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GFPEKSDIFD 10
GF KSDI +
Sbjct: 105 GFKTKSDIIN 114


>sp|RS6E_PICTO|SMALL ribosomal subunit protein eS6|Picrophilus torridus (strain ATCC

Query: 1 GFPEKSDI 8
GFP K D+
Sbjct: 58 GFPMKKDL 65


>sp|RS6E_METST|SMALL ribosomal subunit protein eS6|Methanosphaera stadtmanae (strain

Query: 1 GFPEKSDI 8
GFP K D+
Sbjct: 57 GFPMKEDV 64


>sp|PURL_HALMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloarcula marismortui (strain ATCC 43049

Query: 1 GFPEKSDIF 9
G PEK D++
Sbjct: 485 GNPEKPDVY 493




491|Sequence|2451|2460|SDIFDVDAGQ

>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 SDIFDVDAGQ 10
SD+F VDA Q
Sbjct: 747 SDVFGVDAEQ 756


>sp|RL4_METBF|LARGE ribosomal subunit protein uL4|Methanosarcina barkeri (strain

Query: 2 DIFDVD 7
D+FDVD
Sbjct: 21 DVFDVD 26


>sp|PRIS_METTH|DNA primase small subunit PriS|Methanothermobacter thermautotrophicus

Query: 3 IFDVDA 8
IFDVDA
Sbjct: 95 IFDVDA 100


>sp|Y700_METJA|UNCHARACTERIZED MscS family protein MJ0700|Methanocaldococcus jannaschii (strain

Query: 2 DIFDVD 7
D+FD+D
Sbjct: 156 DVFDID 161


>sp|PRIS_METS3|DNA primase small subunit PriS|Methanobrevibacter smithii (strain

Query: 3 IFDVDA 8
IFDVDA
Sbjct: 92 IFDVDA 97


>sp|CDC62_SULTO|ORC1-TYPE DNA replication protein 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SDIFDVDAG 9
SDI+ +D G
Sbjct: 251 SDIYGIDKG 259


>sp|MUTS1_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 3 IFDVDAGQ 10
+FD+D+GQ
Sbjct: 829 VFDLDSGQ 836


>sp|MCH_METBF|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina barkeri (strain Fusaro /

Query: 2 DIFDVDAG 9
D F VDAG
Sbjct: 277 DFFKVDAG 284


>sp|MCH_METAC|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DIFDVDAG 9
D F VDAG
Sbjct: 277 DFFKVDAG 284


>sp|MCH_METMA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DIFDVDAG 9
D F VDAG
Sbjct: 277 DFFKVDAG 284




492|Sequence|2456|2465|VDAGQNLELE

>sp|G1PDH_METBU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcoides burtonii (strain DSM

Query: 2 DAGQNLEL 9
DAGQN+EL
Sbjct: 65 DAGQNVEL 72


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 VDAGQNLELE 10
VDAGQ +L+
Sbjct: 913 VDAGQKFQLK 922


>sp|DCDB_METKA|DCTP deaminase, dUMP-forming|Methanopyrus kandleri (strain AV19 /

Query: 1 VDAGQNLE 8
VDAG+N E
Sbjct: 60 VDAGENTE 67


>sp|TBP_CENSY|TATA-BOX-BINDING protein|Cenarchaeum symbiosum (strain A)

Query: 1 VDAGQNLELE 10
VDAG+N+ ++
Sbjct: 109 VDAGRNVPID 118


>sp|NADK_METHJ|NAD kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VDAGQNL 7
+DAGQN
Sbjct: 252 IDAGQNF 258


>sp|PURA_HALMA|ADENYLOSUCCINATE synthetase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VDAGQNLELE 10
+D GQN+ LE
Sbjct: 220 IDEGQNVMLE 229


>sp|COFC_METAC|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DAGQNLEL 9
D GQN E+
Sbjct: 152 DTGQNFEI 159




493|Sequence|2461|2470|NLELEYASMV

>sp|ACDD_METJA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanocaldococcus

Query: 1 NLELEYASMV 10
NLEL+Y +V
Sbjct: 236 NLELDYKKIV 245


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NLELEYASM 9
N+ELEY S+
Sbjct: 867 NIELEYTSV 875


>sp|METK_METST|S-ADENOSYLMETHIONINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 NLELEYASMV 10
NL++EY ++V
Sbjct: 126 NLDVEYGTVV 135


>sp|GSA_ARCFU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LELEYASMV 10
LE+EYA ++
Sbjct: 90 LEIEYAKLI 98


>sp|ASSY_PICTO|ARGININOSUCCINATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 3 ELEYASM 9
ELEYA M
Sbjct: 151 ELEYAKM 157




494|Sequence|2466|2475|YASMVPSSQG

>sp|PYRI_METLZ|ASPARTATE carbamoyltransferase regulatory chain|Methanocorpusculum

Query: 2 ASMVPSSQG 10
AS VPSS+G
Sbjct: 48 ASNVPSSRG 56




495|Sequence|2471|2480|PSSQGNLSIL

>sp|AROA_METAR|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PSSQGNLSIL 10
PS QG+ +IL
Sbjct: 259 PSKQGDAAIL 268




496|Sequence|2476|2485|NLSILSRQES

***** No hits found ******


497|Sequence|2481|2490|SRQESSFFTL

***** No hits found ******


498|Sequence|2486|2495|SFFTLTIVPH

>sp|Y1326_METJA|UNCHARACTERIZED GTP-binding protein MJ1326|Methanocaldococcus jannaschii (strain

Query: 1 SFFTLTIVP 9
+F TLTIVP
Sbjct: 115 AFTTLTIVP 123


>sp|ADEC_METJA|ADENINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SFFTLTIVP 9
SFF+L ++P
Sbjct: 528 SFFSLPVIP 536


>sp|Y224_METTH|UPF0058 protein MTH_224|Methanothermobacter thermautotrophicus (strain

Query: 2 FFTLTIVPH 10
+F+L I PH
Sbjct: 33 YFSLNISPH 41


>sp|FRHG_METBF|COENZYME F420 hydrogenase subunit gamma|Methanosarcina barkeri (strain

Query: 1 SFFTLTIVP 9
SFF L ++P
Sbjct: 231 SFFNLDVIP 239


>sp|PYRC_SACS2|DIHYDROOROTASE solfataricus (strain ATCC 35092

Query: 3 FTLTIVPH 10
FT+ I PH
Sbjct: 212 FTVDITPH 219


>sp|Y1511_METMJ|UPF0316 protein Memar_1511|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 FFTLTIVP 9
FF+L +VP
Sbjct: 12 FFSLVVVP 19




499|Sequence|2491|2500|TIVPHGYTEV

>sp|AATC_METTH|A-TYPE ATP synthase subunit C|Methanothermobacter thermautotrophicus

Query: 2 IVPHGY 7
IVPHGY
Sbjct: 270 IVPHGY 275


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 VPHGYT 8
VPHGY+
Sbjct: 153 VPHGYS 158


>sp|AROB_SACS2|3-DEHYDROQUINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 VPHGY 7
VPHGY
Sbjct: 252 VPHGY 256


>sp|TRPD_SULAC|ANTHRANILATE phosphoribosyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 IVPHGYTEV 10
I P+GYT V
Sbjct: 220 ISPYGYTTV 228


>sp|AROB_SULTO|3-DEHYDROQUINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 VPHGY 7
VPHGY
Sbjct: 251 VPHGY 255


>sp|Y1471_METMP|UNCHARACTERIZED protein MMP1471|Methanococcus maripaludis (strain DSM 14266

Query: 2 IVPHGYTE 9
I+P GY E
Sbjct: 137 IIPRGYIE 144


>sp|Y096_METJA|UNCHARACTERIZED protein MJ0096|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IVPHGYTE 9
++PHG+ E
Sbjct: 167 VLPHGFFE 174


>sp|SYS_METMJ|SERINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 IVPHGYTEV 10
+V HGYT +
Sbjct: 187 LVEHGYTPI 195


>sp|PUR2_METS3|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 IVPHGYTE 9
IVP GY E
Sbjct: 336 IVPDGYPE 343


>sp|ENO_METKA|ENOLASE kandleri (strain AV19 /

Query: 2 IVPHGY 7
IVPHG+
Sbjct: 166 IVPHGF 171


>sp|THS3_HALVD|CHAPERONIN subunit CTT3|Haloferax volcanii (strain ATCC 29605

Query: 1 TIVPHGYTE 9
T++ GYTE
Sbjct: 122 TVIVEGYTE 130


>sp|AROB_SULAC|3-DEHYDROQUINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 VPHGY 7
+PHGY
Sbjct: 252 IPHGY 256


>sp|SPSS_METTP|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 TIVPHGYTE 9
TI P GY E
Sbjct: 140 TINPEGYRE 148


>sp|Y706_METJA|UNCHARACTERIZED protein MJ0706|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IVPHGYTEV 10
++PHG E+
Sbjct: 136 VLPHGIIEI 144


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 2 IVPHGYTE 9
+VP GY E
Sbjct: 430 LVPSGYVE 437


>sp|MTTC2_METAC|TRIMETHYLAMINE corrinoid protein 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IVPHGYT 8
I+ HGYT
Sbjct: 40 IIEHGYT 46


>sp|SYS_METLZ|SERINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 TIVPHGYTEV 10
TI+ GYT +
Sbjct: 186 TIIAKGYTPI 195


>sp|Y793_METJA|UNCHARACTERIZED protein MJ0793|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IVPHGYTEV 10
I+PHG E+
Sbjct: 102 ILPHGIFEI 110


>sp|TREZ_SACS2|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 HGYTEV 10
HGY+E+
Sbjct: 80 HGYSEI 85


>sp|EPPA_METJA|PREPILIN peptidase EppA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IVPHGYT 8
I+PH YT
Sbjct: 27 IIPHKYT 33


>sp|MPTA_METM6|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain C6 /

Query: 3 VPHGYT 8
VP+GYT
Sbjct: 210 VPNGYT 215


>sp|PUR2_METKA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 IVPHGYTE 9
+VP GY E
Sbjct: 344 VVPEGYPE 351


>sp|MPTA_METVS|GTP cyclohydrolase MptA|Methanococcus vannielii (strain ATCC 35089

Query: 3 VPHGYT 8
VP+GYT
Sbjct: 210 VPNGYT 215




500|Sequence|2496|2505|GYTEVANIPV

>sp|SYH_METLZ|HISTIDINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GYTEVANIP 9
GY E NIP
Sbjct: 236 GYLEAQNIP 244


>sp|RFCS_ARCFU|REPLICATION factor C small subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GYTEVANIP 9
GY E NIP
Sbjct: 31 GYVERKNIP 39


>sp|PURP_THEKO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Thermococcus kodakarensis (strain ATCC

Query: 2 YTEVANIPV 10
YT V NIP+
Sbjct: 224 YTVVGNIPI 232


>sp|GFCR_HALLT|TRANSCRIPTIONAL regulator GfcR|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 GYTEVANIPV 10
GY E+ +PV
Sbjct: 189 GYDEIDGVPV 198


>sp|RL30E_METKA|LARGE ribosomal subunit protein eL30|Methanopyrus kandleri (strain AV19

Query: 2 YTEVANIPV 10
Y E+A++PV
Sbjct: 53 YAELADVPV 61


>sp|HCP_METVS|HYDROXYLAMINE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GYTEVANIPV 10
GY +V IPV
Sbjct: 326 GYPDVKTIPV 335


>sp|IF1A_THEVO|TRANSLATION initiation factor 1A|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GYTEVANIP 9
GYT A IP
Sbjct: 60 GYTRNARIP 68


>sp|IF1A_THEAC|TRANSLATION initiation factor 1A|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GYTEVANIP 9
GYT A IP
Sbjct: 56 GYTRNARIP 64


>sp|SYW_METJA|TRYPTOPHAN--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YTEVANIPV 10
YT+ NIP+
Sbjct: 96 YTDNINIPI 104


>sp|PYRB_META3|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus aeolicus

Query: 1 GYTEVANIPV 10
G+T++AN V
Sbjct: 71 GFTDIANTSV 80


>sp|PURP_KORCO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 YTEVANIPV 10
YT NIPV
Sbjct: 258 YTVTGNIPV 266


>sp|YNI1_METIV|UNCHARACTERIZED protein in nifH2 5'region|Methanobacterium ivanovii

Query: 1 GYTEVAN 7
GY E+AN
Sbjct: 37 GYEEIAN 43


>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GYTEVANIPV 10
GY ++ +P+
Sbjct: 293 GYVKIVGVPI 302




501|Sequence|2501|2510|ANIPVARPGR

>sp|H669_METJA|PROBABLE ATP-dependent RNA helicase MJ0669|Methanocaldococcus jannaschii

Query: 1 ANIPVARPGR 10
ANI V PGR
Sbjct: 124 ANIVVGTPGR 133


>sp|ACDE1_METAC|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanosarcina

Query: 1 ANIPVARPG 9
ANIP+A G
Sbjct: 61 ANIPIAATG 69


>sp|ACDE1_METMA|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanosarcina

Query: 1 ANIPVARPG 9
ANIP+A G
Sbjct: 61 ANIPIAATG 69


>sp|ACDE2_METMA|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanosarcina

Query: 1 ANIPVARPG 9
ANIP+A G
Sbjct: 61 ANIPIAATG 69


>sp|ACDE2_METAC|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanosarcina

Query: 1 ANIPVARPG 9
ANIP+A G
Sbjct: 61 ANIPIAATG 69


>sp|ACDE1_METBF|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanosarcina

Query: 1 ANIPVARPG 9
ANIP+A G
Sbjct: 61 ANIPIAATG 69


>sp|APT_METVS|ADENINE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 3 IPVARPGR 10
+PV +PG+
Sbjct: 75 VPVRKPGK 82


>sp|APT_METM7|ADENINE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 3 IPVARPGR 10
+PV +PG+
Sbjct: 75 VPVRKPGK 82


>sp|APT_METM5|ADENINE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 3 IPVARPGR 10
+PV +PG+
Sbjct: 75 VPVRKPGK 82


>sp|APT_METMP|ADENINE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 3 IPVARPGR 10
+PV +PG+
Sbjct: 75 VPVRKPGK 82


>sp|IF5A_THESM|TRANSLATION initiation factor 5A|Thermococcus sibiricus (strain DSM 12597

Query: 1 ANIPVARPGR 10
ANI V+ PG+
Sbjct: 28 ANITVSSPGK 37


>sp|MPTA_METMJ|GTP cyclohydrolase MptA|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 IPVARPGR 10
+ VARPG+
Sbjct: 29 VEVARPGK 36


>sp|COBQ_METAR|PROBABLE cobyric acid synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 ANIPVAR 7
ANIP+AR
Sbjct: 148 ANIPLAR 154


>sp|ACDE1_METTE|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanosarcina

Query: 1 ANIPVARPG 9
AN+P+A G
Sbjct: 61 ANLPIAATG 69


>sp|TRUD_THEGJ|PROBABLE tRNA pseudouridine synthase D|Thermococcus gammatolerans (strain

Query: 4 PVARPGR 10
P+A PGR
Sbjct: 365 PMAEPGR 371


>sp|AROD_METS5|3-DEHYDROQUINATE dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 ANIPVARPG 9
A++PV PG
Sbjct: 8 ASLPVTSPG 16




502|Sequence|2506|2515|ARPGRRLYNV

>sp|RNZ_HALMA|RIBONUCLEASE Z|Haloarcula marismortui (strain ATCC 43049

Query: 1 ARPGRRL 7
ARPGRR
Sbjct: 199 ARPGRRF 205


>sp|GLYA_METJA|SERINE hydroxymethyltransferase|Methanocaldococcus jannaschii (strain

Query: 3 PGRRLY 8
PG+RLY
Sbjct: 55 PGKRLY 60


>sp|GLYA_METKA|SERINE hydroxymethyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 ARPGRRLY 8
+PG RLY
Sbjct: 53 GKPGERLY 60


>sp|SYP_THEKO|PROLINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RPGRRLYN 9
RPGR+ Y+
Sbjct: 330 RPGRKYYD 337


>sp|MAP2_THEKO|METHIONINE aminopeptidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RPGRRLYNV 10
+PG +LY++
Sbjct: 26 KPGAKLYDI 34


>sp|RL37_AERPE|LARGE ribosomal subunit protein eL37|Aeropyrum pernix (strain ATCC

Query: 2 RPGRRLYNV 10
R GRR YNV
Sbjct: 22 RCGRRSYNV 30


>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 1 ARPGRRLYNV 10
+ PG R++NV
Sbjct: 5 SNPGGRIHNV 14


>sp|FLPA_PYRAE|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum aerophilum (strain

Query: 3 PGRRLY 8
PGRR+Y
Sbjct: 36 PGRRVY 41


>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 1 ARPGRRLYNV 10
+ PG R++NV
Sbjct: 5 SNPGGRIHNV 14


>sp|MAP2_THEON|METHIONINE aminopeptidase|Thermococcus onnurineus (strain NA1)

Query: 2 RPGRRLYNV 10
+PG +LY++
Sbjct: 26 KPGTKLYDI 34


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 2 RPGRRLYNV 10
RPGR +NV
Sbjct: 735 RPGRFSFNV 743


>sp|FLPA_PYRCJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum calidifontis (strain

Query: 3 PGRRLY 8
PGRR+Y
Sbjct: 36 PGRRVY 41




503|Sequence|2511|2520|RLYNVRNPNA

>sp|CISY_HALVD|CITRATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 RLYNVRNPNA 10
R+YNV++P A
Sbjct: 266 RVYNVKDPRA 275


>sp|ARFB_METRM|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanobrevibacter ruminantium

Query: 4 NVRNPN 9
NV+NPN
Sbjct: 10 NVKNPN 15


>sp|GCH1L_METJA|GTP cyclohydrolase 1 type 2|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LYNVRNP 8
LYN+ NP
Sbjct: 115 LYNLENP 121


>sp|SYK2_METMA|LYSINE--TRNA ligase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RLYNVR 6
RLYN+R
Sbjct: 80 RLYNIR 85


>sp|ACDG2_METMA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina mazei

Query: 1 RLYNVRNPNA 10
++Y V NP A
Sbjct: 344 KMYKVGNPTA 353


>sp|ACDG1_METMA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina mazei

Query: 1 RLYNVRNPNA 10
++Y V NP A
Sbjct: 344 KMYKVGNPTA 353


>sp|SYK2_METAC|LYSINE--TRNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RLYNVR 6
RLYN+R
Sbjct: 80 RLYNIR 85


>sp|TRPF_METJA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LYNVRNPNA 10
+YN PNA
Sbjct: 76 IYNALKPNA 84


>sp|COXX_PYRAR|PROTOHEME IX farnesyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LYNVRNPN 9
LY+ R PN
Sbjct: 25 LYSARQPN 32




504|Sequence|2516|2525|RNPNASHSDS

>sp|DNAG_METM7|DNA primase DnaG|Methanococcus maripaludis (strain C7 /

Query: 3 PNASHSDS 10
PN HSDS
Sbjct: 163 PNVVHSDS 170


>sp|DNAG_METM6|DNA primase DnaG|Methanococcus maripaludis (strain C6 /

Query: 3 PNASHSDS 10
PN HSDS
Sbjct: 163 PNVVHSDS 170


>sp|DNAG_METM5|DNA primase DnaG|Methanococcus maripaludis (strain C5 /

Query: 3 PNASHSDS 10
PN HSDS
Sbjct: 163 PNVVHSDS 170


>sp|DNAG_METMP|DNA primase DnaG|Methanococcus maripaludis (strain DSM 14266

Query: 3 PNASHSDS 10
PN HSDS
Sbjct: 163 PNIIHSDS 170


>sp|DNAG_METVS|DNA primase DnaG|Methanococcus vannielii (strain ATCC 35089

Query: 3 PNASHSDS 10
PN HSDS
Sbjct: 163 PNILHSDS 170


>sp|AROC_THEVO|CHORISMATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 NPNASHSD 9
NP HSD
Sbjct: 101 NPRPGHSD 108




505|Sequence|2521|2530|SHSDSVLVQI

>sp|RFCL_METKA|REPLICATION factor C large subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 HSDSVLVQI 10
HSD VLV +
Sbjct: 113 HSDRVLVLV 121




506|Sequence|2526|2535|VLVQIDATEG

>sp|PRNK_PYRAB|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PYRAB01840|Pyrococcus abyssi (strain GE5 /

Query: 2 LVQIDATEG 10
+V++DA+EG
Sbjct: 262 VVKVDASEG 270




507|Sequence|2531|2540|DATEGNKVIT

>sp|FAU1_PYRHO|PROBABLE ribonuclease FAU-1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DATEGNKVI 9
DATEG++VI
Sbjct: 125 DATEGDEVI 133


>sp|MTAA_METBA|METHYLCOBAMIDE:COM methyltransferase MtaA|Methanosarcina barkeri

Query: 1 DATEGNKVI 9
DA EG KVI
Sbjct: 265 DAAEGKKVI 273


>sp|PIMT_METAR|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DATEGNKVI 9
D EGNKV+
Sbjct: 46 DIREGNKVL 54


>sp|PRIS_HALWD|DNA primase small subunit PriS|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DATEGNKVI 9
D TEGNK +
Sbjct: 358 DITEGNKTV 366


>sp|FLAK_METVO|PREFLAGELLIN peptidase|Methanococcus voltae

Query: 1 DATEGNKVI 9
+A +GNKV+
Sbjct: 162 EAKKGNKVV 170


>sp|TRM1_HALWD|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloquadratum walsbyi

Query: 4 EGNKVIT 10
EGN+VIT
Sbjct: 271 EGNRVIT 277


>sp|RRP4_NITMS|EXOSOME complex component Rrp4|Nitrosopumilus maritimus (strain SCM1)

Query: 4 EGNKVIT 10
EGNK+I+
Sbjct: 28 EGNKIIS 34


>sp|BIOU_HALMT|(S)-8-AMINO-7-OXONONANOATE synthase BioU|Haloferax mediterranei (strain ATCC 33500

Query: 1 DATEGN 6
DATEGN
Sbjct: 53 DATEGN 58


>sp|Y1054_METJA|UNCHARACTERIZED protein MJ1054|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DATEGNKVI 9
D EG+KVI
Sbjct: 354 DVKEGDKVI 362


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 TEGNKVI 9
T GNKVI
Sbjct: 1016 TRGNKVI 1022


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 TEGNKVI 9
T GNKVI
Sbjct: 1016 TRGNKVI 1022




508|Sequence|2536|2545|NKVITLRSPL

>sp|PGK_SULTO|PHOSPHOGLYCERATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NKVITLRSPL 10
KVITLR P+
Sbjct: 323 GKVITLRGPM 332


>sp|TYSY_METTM|PUTATIVE thymidylate synthase|Methanothermobacter marburgensis (strain

Query: 1 NKVITLRSPL 10
N V+T+++PL
Sbjct: 41 NTVVTIKNPL 50


>sp|TYSY_METTH|PUTATIVE thymidylate synthase|Methanothermobacter thermautotrophicus

Query: 1 NKVITLRSPL 10
N V+T++ PL
Sbjct: 41 NTVVTIKKPL 50


>sp|SEPS_METMP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NKVITLRSPL 10
NKVI +R P+
Sbjct: 519 NKVIDVRGPV 528


>sp|SEPS_METM6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C6 /

Query: 1 NKVITLRSPL 10
NKVI +R P+
Sbjct: 519 NKVIDVRGPV 528


>sp|SEPS_METM7|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C7 /

Query: 1 NKVITLRSPL 10
NKVI +R P+
Sbjct: 519 NKVIDVRGPV 528


>sp|SEPS_METJA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NKVITLRSPL 10
NKVI +R P+
Sbjct: 521 NKVIDVRGPV 530


>sp|SEPS_METVS|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 NKVITLRSPL 10
NKVI +R P+
Sbjct: 519 NKVIDVRGPV 528


>sp|Y718_ARCFU|UNCHARACTERIZED protein AF_0718|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NKVITLRSP 9
NKV+ LR P
Sbjct: 10 NKVVDLRPP 18


>sp|SEPS_META3|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 NKVITLRSPL 10
NKVI +R P+
Sbjct: 521 NKVIDIRGPV 530


>sp|G6PI_HALWD|PROBABLE glucose-6-phosphate isomerase|Haloquadratum walsbyi (strain DSM

Query: 1 NKVITLRSP 9
NKVITL P
Sbjct: 304 NKVITLIRP 312


>sp|PGK_SULAC|PHOSPHOGLYCERATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NKVITLRSPL 10
+KV+ LR P+
Sbjct: 323 SKVVVLRGPM 332


>sp|AATA_METBU|A-TYPE ATP synthase subunit A|Methanococcoides burtonii (strain DSM 6242

Query: 1 NKVITLRS 8
NK+IT++S
Sbjct: 537 NKIITIKS 544


>sp|PGK_SACS2|PHOSPHOGLYCERATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KVITLRSPL 10
KV+ LR P+
Sbjct: 319 KVVVLRGPM 327




509|Sequence|2541|2550|LRSPLQIKNH

>sp|PUS10_PICTO|TRNA pseudouridine synthase Pus10|Picrophilus torridus (strain ATCC

Query: 2 RSPLQIKNH 10
R+PL++ NH
Sbjct: 297 RTPLRVINH 305


>sp|COMB_METTH|2-PHOSPHOSULFOLACTATE phosphatase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 SPLQIKNH 10
SPL++KN+
Sbjct: 75 SPLEVKNY 82


>sp|MRE11_METAC|DNA double-strand break repair protein|Methanosarcina acetivorans

Query: 1 LRSPLQIKN 9
R+P++IKN
Sbjct: 472 FRAPVRIKN 480


>sp|Y191_METTH|PUTATIVE glutamine amidotransferase MTH_191|Methanothermobacter

Query: 1 LRSPLQIKNH 10
+R PL+ K H
Sbjct: 194 IREPLERKGH 203


>sp|RS4E_THEVO|SMALL ribosomal subunit protein eS4|Thermoplasma volcanium (strain ATCC

Query: 4 PLQIKN 9
PLQ+KN
Sbjct: 117 PLQVKN 122




510|Sequence|2546|2555|QIKNHFSIAF

>sp|PIMT_THESM|PROTEIN-L-ISOASPARTATE O-methyltransferase|Thermococcus sibiricus (strain DSM 12597

Query: 1 QIKNHFSIAF 10
+IKNH +AF
Sbjct: 201 KIKNHGGVAF 210


>sp|PIMT_PYRHO|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QIKNHFSIAF 10
+IKNH +AF
Sbjct: 200 KIKNHGGVAF 209


>sp|PIMT_PYRFU|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QIKNHFSIAF 10
+IKNH +AF
Sbjct: 199 KIKNHGGVAF 208


>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain Fusaro

Query: 1 QIKNHFSIA 9
++KNHF +A
Sbjct: 226 RLKNHFRVA 234


>sp|Y330_METJA|UNCHARACTERIZED protein MJ0330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QIKNHFSIAF 10
++NHFS+ F
Sbjct: 407 HLQNHFSVKF 416


>sp|IPK_METTH|ISOPENTENYL phosphate kinase|Methanothermobacter thermautotrophicus (strain

Query: 1 QIKNHFSI 8
Q+ NHFS+
Sbjct: 159 QLINHFSL 166


>sp|PIMT_PYRAB|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 QIKNHFSIAF 10
+++NH +AF
Sbjct: 196 KVRNHGGVAF 205




511|Sequence|2551|2560|FSIAFIIYKF

>sp|FPOL_METMA|F(420)H(2) dehydrogenase subunit L|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FSIAFIIY 8
F+IAF+IY
Sbjct: 559 FAIAFVIY 566




512|Sequence|2556|2565|IIYKFVKNVK

>sp|HMD_METVO|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus voltae

Query: 1 IIYKFVKNVK 10
II KFV N+K
Sbjct: 158 IIEKFVANIK 167


>sp|AMPD_ARCFU|ANHYDROMEVALONATE phosphate decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IIYKFVKNV 9
+IY+FV NV
Sbjct: 303 VIYRFVSNV 311


>sp|CDC61_THEAC|PUTATIVE ORC1-type DNA replication protein|Thermoplasma acidophilum

Query: 1 IIYKFVKNV 9
I Y++VKNV
Sbjct: 58 IAYRYVKNV 66


>sp|CBIM_METST|PUTATIVE cobalt transport protein CbiM|Methanosphaera stadtmanae (strain

Query: 1 IIYKFVKNVK 10
+IY+F+K K
Sbjct: 197 VIYRFIKQQK 206


>sp|HEM1_PICTO|GLUTAMYL-TRNA reductase|Picrophilus torridus (strain ATCC 700027

Query: 1 IIYKFVKNVK 10
+ YKF NVK
Sbjct: 320 MFYKFANNVK 329


>sp|ARCH_AERPE|PROTEIN archease|Aeropyrum pernix (strain ATCC 700893

Query: 1 IIYKFVKNV 9
++Y+F++N+
Sbjct: 63 LLYRFIENL 71




513|Sequence|2561|2570|VKNVKLLERI

>sp|SMC_THEAC|CHROMOSOME partition protein Smc|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VKNVKLLE 8
V+NVK+LE
Sbjct: 491 VRNVKMLE 498


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KNVKLLER 9
K++KL+ER
Sbjct: 842 KDIKLIER 849


>sp|KPTA_THEKO|PROBABLE RNA 2'-phosphotransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 KNVKLLERI 10
KNV+++ER+
Sbjct: 163 KNVRIVERV 171


>sp|Y373_PYRAB|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus abyssi (strain GE5 /

Query: 2 KNVKLLERI 10
+NV+ LERI
Sbjct: 233 ENVEFLERI 241


>sp|RFCS_PYRHO|REPLICATION factor C small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 NVKLLERI 10
NV++LERI
Sbjct: 508 NVEILERI 515




514|Sequence|2566|2575|LLERIGIARP

>sp|GPMI1_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 LLERIGIARP 10
LLE IGI +P
Sbjct: 494 LLELIGIPKP 503


>sp|Y691_METJA|DNA-BINDING protein MJ0691|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LERIGIARP 10
LERI +ARP
Sbjct: 51 LERIRLARP 59


>sp|TSR3_THEAC|16S rRNA aminocarboxypropyltransferase|Thermoplasma acidophilum

Query: 2 LERIGIAR 9
LER GIAR
Sbjct: 22 LERFGIAR 29


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 1 LLERIGIARP 10
LLE++GI +P
Sbjct: 663 LLEKLGIPQP 672


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 1 LLERIGIARP 10
LL+R+GI +P
Sbjct: 662 LLDRLGIKQP 671


>sp|QUEC_METMA|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LLERIGI 7
LLER+GI
Sbjct: 225 LLERLGI 231


>sp|HDRE_METBF|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina barkeri (strain

Query: 1 LLERIGIARP 10
+ E+IGIA P
Sbjct: 132 MTEKIGIALP 141


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 1 LLERIGIARP 10
LLE +GI +P
Sbjct: 683 LLEELGIKQP 692


>sp|MTXA_METAC|PUTATIVE methyltransferase Mtx subunit A|Methanosarcina acetivorans (strain

Query: 1 LLERIGIARP 10
LL+RIG+ P
Sbjct: 125 LLDRIGLNDP 134


>sp|PRDPP_METMA|PRENYL-DIPHOSPHATE phosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LLERIGIARP 10
+LE IGI+ P
Sbjct: 78 MLEEIGISVP 87


>sp|RTCA_SULAC|RNA 3'-terminal phosphate cyclase|Sulfolobus acidocaldarius (strain

Query: 1 LLERIGIA 8
+LERIGI+
Sbjct: 138 VLERIGIS 145


>sp|RL21_METPE|LARGE ribosomal subunit protein eL21|Methanosphaerula palustris (strain

Query: 2 LERIGIARP 10
+E+I IARP
Sbjct: 81 MEKIVIARP 89


>sp|Y373_PYRAB|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus abyssi (strain GE5 /

Query: 1 LLERIGIARP 10
LERIGI P
Sbjct: 237 FLERIGIRIP 246


>sp|NIFH2_METTH|NITROGENASE iron protein 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LLERIGIAR 9
LLER+G+ R
Sbjct: 102 LLERLGVFR 110


>sp|HISX_NATPD|HISTIDINOL dehydrogenase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LERIGIARP 10
LER+G+ P
Sbjct: 117 LERVGVYAP 125


>sp|COFD_METKA|2-PHOSPHO-L-LACTATE transferase|Methanopyrus kandleri (strain AV19 /

Query: 1 LLERIGIARP 10
LER+G+ P
Sbjct: 78 FLERLGVDEP 87


>sp|SYH_PYRIL|HISTIDINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LLERIGIA 8
LLER+G++
Sbjct: 173 LLERLGVS 180


>sp|QUEC_METBF|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LLERIGI 7
LLER+GI
Sbjct: 225 LLERLGI 231




515|Sequence|2571|2580|GIARPEEEFH

>sp|TRPC_PYRNV|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GIARPEE 7
GI+RPEE
Sbjct: 204 GISRPEE 210


>sp|RLME_METS3|RIBOSOMAL RNA large subunit methyltransferase|Methanobrevibacter smithii

Query: 5 PEEEFH 10
PEE FH
Sbjct: 83 PEENFH 88


>sp|TRPC_PYRAR|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GIARPEE 7
GI++PEE
Sbjct: 204 GISKPEE 210


>sp|TRUA_PYRFU|TRNA pseudouridine synthase A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GIARPEEEFH 10
GIA E+FH
Sbjct: 87 GIAEVPEDFH 96


>sp|TRPF_PYRIL|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GIARPEE 7
G+ARPE+
Sbjct: 7 GVARPED 13


>sp|NADE_HYPBU|NH(3)-DEPENDENT NAD(+) synthetase|Hyperthermus butylicus (strain DSM 5456

Query: 1 GIARPEEEF 9
G+AR EEF
Sbjct: 15 GVARSIEEF 23




516|Sequence|2576|2585|EEEFHVPLDS

>sp|TBP_METKA|TATA-BOX-BINDING protein|Methanopyrus kandleri (strain AV19 /

Query: 3 EFHVPLD 9
+FHVPLD
Sbjct: 102 DFHVPLD 108


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 EEFHVPL 8
+EFHVPL
Sbjct: 471 DEFHVPL 477


>sp|PDXT_ARCFU|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Archaeoglobus fulgidus (strain

Query: 2 EEFHVPLD 9
E F VPLD
Sbjct: 123 ESFQVPLD 130


>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EEEFHVP 7
EEE+H+P
Sbjct: 312 EEEYHLP 318


>sp|MOAA_THEVO|PROBABLE GTP 3',8-cyclase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 EFHVPLDS 10
++H+PLDS
Sbjct: 200 KYHMPLDS 207


>sp|THIC_IGNH4|PHOSPHOMETHYLPYRIMIDINE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EEEFHVPL 8
+EE H PL
Sbjct: 431 DEELHAPL 438


>sp|FAU1_STAMF|PROBABLE ribonuclease FAU-1|Staphylothermus marinus (strain ATCC 43588

Query: 2 EEFHVPLDS 10
E F++PLD+
Sbjct: 35 ERFNLPLDT 43


>sp|RS2_THEKO|SMALL ribosomal subunit protein uS2|Thermococcus kodakarensis (strain

Query: 2 EEFHVPLD 9
EE+ VPLD
Sbjct: 2 EEYLVPLD 9


>sp|TRM10_THEKO|TRNA (guanine(9)-/adenine(9)-N1)-methyltransferase|Thermococcus

Query: 2 EEFHVPLD 9
E FH PLD
Sbjct: 150 EMFHGPLD 157


>sp|RS2_METJA|SMALL ribosomal subunit protein uS2|Methanocaldococcus jannaschii

Query: 1 EEEFHVPLDS 10
E+E VPLD+
Sbjct: 3 EKELLVPLDT 12


>sp|SYG_METVS|GLYCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 EEFHVPLD 9
E+F +PLD
Sbjct: 557 EQFRIPLD 564


>sp|HMPTM_METJA|7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN dimethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EEEFHVPLD 9
EE+F +PL+
Sbjct: 481 EEKFSIPLE 489


>sp|IF5A_PYRFU|TRANSLATION initiation factor 5A|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EEFHVPLDS 10
E F VPLD+
Sbjct: 95 EMFEVPLDT 103


>sp|Y485_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EEEFHVPL 8
EEEF +P+
Sbjct: 44 EEEFGIPV 51




517|Sequence|2581|2590|VPLDSYRCQL

>sp|DHE_HALSI|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (Halobacterium halobium)

Query: 3 LDSYRCQL 10
D+YRCQ
Sbjct: 54 FDAYRCQF 61


>sp|DHE_HALSA|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (strain ATCC 700922

Query: 3 LDSYRCQL 10
D+YRCQ
Sbjct: 54 FDAYRCQF 61


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PLDSYR 7
PLD+YR
Sbjct: 499 PLDAYR 504


>sp|GCH3_PYRAR|GTP cyclohydrolase III|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PLDSYR 7
PLD+YR
Sbjct: 94 PLDAYR 99


>sp|KHSE_THEAC|HOMOSERINE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VPLDSY 6
+PLDSY
Sbjct: 191 IPLDSY 196


>sp|Y1008_CALMQ|UPF0179 protein Cmaq_1008|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 VPLDSYRCQL 10
+P + YRC+L
Sbjct: 23 IPEECYRCKL 32




518|Sequence|2586|2595|YRCQLFIQPA

***** No hits found ******


519|Sequence|2591|2600|FIQPAGILEH

>sp|DAPA_METTH|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 QPAGILEH 10
QP G++EH
Sbjct: 112 QPHGLIEH 119


>sp|FOLD_PYRNV|BIFUNCTIONAL protein FolD|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 PAGILE 9
PAGILE
Sbjct: 151 PAGILE 156


>sp|FOLD_PYRIL|BIFUNCTIONAL protein FolD|Pyrobaculum islandicum (strain DSM 4184

Query: 4 PAGILE 9
PAGILE
Sbjct: 151 PAGILE 156


>sp|FOLD_PYRCJ|BIFUNCTIONAL protein FolD|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 PAGILE 9
PAGILE
Sbjct: 147 PAGILE 152


>sp|FOLD_PYRAE|BIFUNCTIONAL protein FolD|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PAGILE 9
PAGILE
Sbjct: 151 PAGILE 156


>sp|FOLD_PYRAR|BIFUNCTIONAL protein FolD|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 PAGILE 9
PAGILE
Sbjct: 151 PAGILE 156


>sp|GLNA3_HALMT|GLUTAMINE synthetase 3|Haloferax mediterranei (strain ATCC 33500

Query: 5 AGILEH 10
AGILEH
Sbjct: 287 AGILEH 292


>sp|KORB_ARCFU|2-OXOGLUTARATE synthase subunit KorB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IQPAGILEH 10
I+PA +L+H
Sbjct: 207 IKPADLLKH 215


>sp|DAPA_METMA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 PAGILEH 10
PAG+L H
Sbjct: 110 PAGLLAH 116


>sp|DAPA_METAC|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 PAGILEH 10
PAG+L H
Sbjct: 110 PAGLLAH 116


>sp|DAPA_METBF|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 PAGILEH 10
PAG+L H
Sbjct: 110 PAGLLTH 116


>sp|GLCD2_HALTV|GLUCOSE 1-dehydrogenase 2|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 FIQPAGILE 9
F++PA ++E
Sbjct: 148 FVEPASLVE 156




520|Sequence|2596|2605|GILEHQYKES

>sp|PSB_METAC|PROTEASOME subunit beta|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GILEHQYKE 9
G+LE QYKE
Sbjct: 147 GVLEDQYKE 155


>sp|PSB_METBF|PROTEASOME subunit beta|Methanosarcina barkeri (strain Fusaro /

Query: 1 GILEHQYKE 9
G+LE QY+E
Sbjct: 147 GVLEDQYRE 155


>sp|PSB_METTE|PROTEASOME subunit beta|Methanosarcina thermophila

Query: 1 GILEHQYKES 10
G+LE QY+E+
Sbjct: 147 GVLEDQYREN 156


>sp|PSB_METMA|PROTEASOME subunit beta|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GILEHQYKE 9
G+LE QY+E
Sbjct: 147 GVLEDQYRE 155


>sp|PSB1_THEPD|PROTEASOME subunit beta 1|Thermofilum pendens (strain DSM 2475

Query: 2 ILEHQYKE 9
+LEH+Y+E
Sbjct: 149 LLEHEYRE 156


>sp|PSB_HALWD|PROTEASOME subunit beta|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GILEHQYKE 9
G+LE QY E
Sbjct: 184 GVLEQQYNE 192


>sp|PSB1_AERPE|PROTEASOME subunit beta 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 GILEHQYK 8
G+LEH YK
Sbjct: 143 GLLEHVYK 150


>sp|PSB_THEAC|PROTEASOME subunit beta|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GILEHQYKE 9
G+LE QY E
Sbjct: 144 GVLESQYSE 152


>sp|PSB_THEVO|PROTEASOME subunit beta|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GILEHQYKE 9
G+LE QY E
Sbjct: 144 GVLESQYNE 152


>sp|PSB2_AERPE|PROTEASOME subunit beta 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 GILEHQYKE 9
G+LE +Y+E
Sbjct: 161 GVLEERYRE 169


>sp|RAD50_NANEQ|DNA double-strand break repair Rad50|Nanoarchaeum equitans (strain

Query: 2 ILEHQYKE 9
ILE+QYKE
Sbjct: 231 ILENQYKE 238


>sp|PSB1_SULAC|PROTEASOME subunit beta 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GILEHQYKES 10
G+LE +Y ES
Sbjct: 141 GVLEAEYNES 150


>sp|PSB_HALSA|PROTEASOME subunit beta|Halobacterium salinarum (strain ATCC 700922

Query: 1 GILEHQYKE 9
G+LE +Y E
Sbjct: 184 GVLEQEYSE 192


>sp|PSB_HALS3|PROTEASOME subunit beta|Halobacterium salinarum (strain ATCC 29341

Query: 1 GILEHQYKE 9
G+LE +Y E
Sbjct: 184 GVLEQEYSE 192


>sp|PSB_META3|PROTEASOME subunit beta|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GILEHQYKE 9
G+LE +YK+
Sbjct: 153 GVLEEEYKK 161


>sp|PSB2_NITMS|PROTEASOME subunit beta 2|Nitrosopumilus maritimus (strain SCM1)

Query: 1 GILEHQYKE 9
G+LE +Y+E
Sbjct: 149 GLLEEEYRE 157


>sp|Y1758_ARCFU|UNCHARACTERIZED protein AF_1758|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GILEHQYKES 10
G+L++QY S
Sbjct: 28 GVLDYQYSNS 37


>sp|PSB_METPS|PROTEASOME subunit beta|Methanocella paludicola (strain DSM 17711

Query: 1 GILEHQYKE 9
G+LE +YK+
Sbjct: 144 GVLEDRYKQ 152


>sp|PSB_METMJ|PROTEASOME subunit beta|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GILEHQYK 8
G+LE QY+
Sbjct: 149 GVLEDQYR 156


>sp|PSB1_STAMF|PROTEASOME subunit beta 1|Staphylothermus marinus (strain ATCC 43588

Query: 1 GILEHQYKE 9
GI+E +Y+E
Sbjct: 154 GIIEKEYRE 162


>sp|PSB2_HALTV|PROTEASOME subunit beta 2|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 GILEHQYKE 9
G+LE +Y+E
Sbjct: 178 GLLEQEYEE 186


>sp|EPPA_METJA|PREPILIN peptidase EppA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ILEHQYKES 10
+LEH+ KE+
Sbjct: 270 LLEHEIKEN 278


>sp|UPPP_METS3|UNDECAPRENYL-DIPHOSPHATASE smithii (strain ATCC 35061

Query: 2 ILEHQYKE 9
I++H++KE
Sbjct: 76 IIQHRFKE 83


>sp|PSB_METMP|PROTEASOME subunit beta|Methanococcus maripaludis (strain DSM 14266

Query: 1 GILEHQYKE 9
G+LE +YK
Sbjct: 153 GVLESEYKS 161


>sp|SYG_METTP|GLYCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 ILEHQYKE 9
+LEH Y E
Sbjct: 442 VLEHSYHE 449


>sp|PSB2_METS5|PROTEASOME subunit beta 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 GILEHQYKE 9
G+LE +Y E
Sbjct: 141 GVLEAEYSE 149


>sp|SYG_METJA|GLYCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ILEHQYKE 9
+LEH Y+E
Sbjct: 459 LLEHSYRE 466


>sp|PSB_METVS|PROTEASOME subunit beta|Methanococcus vannielii (strain ATCC 35089

Query: 1 GILEHQYK 8
G+LE +YK
Sbjct: 153 GVLEAEYK 160


>sp|PSB_METKA|PROTEASOME subunit beta|Methanopyrus kandleri (strain AV19 /

Query: 1 GILEHQYKE 9
G+LE +Y+E
Sbjct: 149 GVLEAEYEE 157


>sp|Y033_METJA|UNCHARACTERIZED FAD-dependent oxidoreductase MJ0033|Methanocaldococcus jannaschii

Query: 1 GILEHQYKE 9
GIL ++YKE
Sbjct: 247 GILYNKYKE 255


>sp|PSB_METST|PROTEASOME subunit beta|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GILEHQYKE 9
G+LE +Y E
Sbjct: 143 GVLEDRYNE 151


>sp|PSB_METPE|PROTEASOME subunit beta|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GILEHQYKE 9
G+LE +YK+
Sbjct: 147 GVLEDRYKK 155




521|Sequence|2601|2610|QYKESTTYIS

>sp|MTNA_PYRAB|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus abyssi (strain

Query: 1 QYKESTTYI 9
+YKE T Y+
Sbjct: 18 EYKERTVYM 26




522|Sequence|2606|2615|TTYISWKEEL

>sp|MDH_ARCFU|MALATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TYISWKE 8
TYI WKE
Sbjct: 125 TYIMWKE 131


>sp|TRUB_METM6|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain C6

Query: 2 TYISWKEE 9
YISWKE+
Sbjct: 206 AYISWKED 213


>sp|TRUB_ARCFU|PROBABLE tRNA pseudouridine synthase B|Archaeoglobus fulgidus (strain ATCC

Query: 3 YISWKEE 9
Y+ WKEE
Sbjct: 210 YVFWKEE 216


>sp|IF2P_METB6|PROBABLE translation initiation factor IF-2|Methanoregula boonei (strain DSM

Query: 3 YISWKEE 9
Y++W++E
Sbjct: 442 YVAWRDE 448


>sp|Y1623_METJA|UNCHARACTERIZED protein MJ1623|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TTYISWKEEL 10
++ I+W+EEL
Sbjct: 409 SSNINWREEL 418


>sp|TRM56_METTP|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanothrix

Query: 1 TTYISWKEEL 10
T I+W++EL
Sbjct: 61 TDGIAWRDEL 70


>sp|IF2P_PYRNV|PROBABLE translation initiation factor IF-2|Pyrobaculum neutrophilum (strain

Query: 3 YISWKEEL 10
YI W +E+
Sbjct: 446 YIKWSQEV 453


>sp|IF2P_PYRIL|PROBABLE translation initiation factor IF-2|Pyrobaculum islandicum (strain

Query: 3 YISWKEEL 10
YI W +E+
Sbjct: 446 YIKWSQEV 453


>sp|IF2P_PYRAE|PROBABLE translation initiation factor IF-2|Pyrobaculum aerophilum (strain

Query: 3 YISWKEEL 10
YI W +E+
Sbjct: 447 YIKWSQEV 454


>sp|MCR_SULTO|MALONYL-COA reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 YISWKEE 9
Y+S+KEE
Sbjct: 253 YVSFKEE 259


>sp|ASOR_PYRFU|ALIPHATIC sulfonate oxidoreductase, WOR-like subunit|Pyrococcus furiosus

Query: 2 TYISWKE 8
TYI WKE
Sbjct: 39 TYILWKE 45


>sp|KDPA_HALSA|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 3 YISWKEEL 10
Y+SW E L
Sbjct: 45 YLSWFERL 52


>sp|KDPA_HALS3|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 3 YISWKEEL 10
Y+SW E L
Sbjct: 45 YLSWFERL 52


>sp|LYSK_SULTO|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TTYISWKEEL 10
TTYI+ EEL
Sbjct: 332 TTYINAIEEL 341


>sp|Y1033_SACS2|KELCH domain-containing protein SSO1033|Saccharolobus solfataricus

Query: 3 YISWKEE 9
YISW E
Sbjct: 601 YISWNNE 607


>sp|TRUB_METMA|PROBABLE tRNA pseudouridine synthase B|Methanosarcina mazei (strain ATCC

Query: 3 YISWKEE 9
Y+ WKE+
Sbjct: 219 YVFWKED 225


>sp|MDH_PYRIL|MALATE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 TYISWK 7
TY+ WK
Sbjct: 124 TYVMWK 129


>sp|MDH_PYRCJ|MALATE dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 TYISWK 7
TY+ WK
Sbjct: 124 TYVMWK 129


>sp|MDH_PYRAE|MALATE dehydrogenase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 TYISWK 7
TY+ WK
Sbjct: 124 TYVMWK 129


>sp|TRUB_METAC|PROBABLE tRNA pseudouridine synthase B|Methanosarcina acetivorans (strain

Query: 3 YISWKEE 9
Y+ WKE+
Sbjct: 219 YVFWKED 225


>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 YISWKEE 9
Y+ WKEE
Sbjct: 160 YVYWKEE 166


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 YISWKEE 9
Y+ WKEE
Sbjct: 160 YVYWKEE 166


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 YISWKEE 9
Y+ WKEE
Sbjct: 160 YVYWKEE 166


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 YISWKEE 9
Y+ WKEE
Sbjct: 160 YVYWKEE 166


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 TYISWKEE 9
YI WK+E
Sbjct: 155 NYIYWKDE 162




523|Sequence|2611|2620|WKEELHRSRE

>sp|Y062_PYRAR|MEMO1 family protein Pars_0062|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 WKEELHRSRE 10
W++ L SRE
Sbjct: 160 WRQTLSTSRE 169


>sp|ACDB2_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 2 KEELHRSRE 10
KEEL ++RE
Sbjct: 156 KEELEKARE 164


>sp|Y028_PYRCJ|MEMO1 family protein Pcal_0028|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 WKEELHRSRE 10
W++ L SRE
Sbjct: 160 WRQTLSTSRE 169


>sp|PUR8_METTH|ADENYLOSUCCINATE lyase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 WKEELHRSRE 10
W +E+HR E
Sbjct: 166 WADEIHRQLE 175


>sp|PRIS_CENSY|DNA primase small subunit PriS|Cenarchaeum symbiosum (strain A)

Query: 1 WKEELHR 7
WK LHR
Sbjct: 234 WKGRLHR 240


>sp|Y818_PYRAE|MEMO1 family protein PAE0818|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 WKEELHRSRE 10
W++ L SRE
Sbjct: 160 WRQTLSTSRE 169


>sp|MFNA_ARCFU|PROBABLE L-aspartate decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KEELHRSR 9
KEEL+R R
Sbjct: 322 KEELYRMR 329


>sp|ASOR_PYRFU|ALIPHATIC sulfonate oxidoreductase, WOR-like subunit|Pyrococcus furiosus

Query: 1 WKEELHRSRE 10
W+EE H + E
Sbjct: 272 WQEEYHDNEE 281


>sp|Y1105_PYRIL|MEMO1 family protein Pisl_1105|Pyrobaculum islandicum (strain DSM 4184

Query: 1 WKEELHRSRE 10
W++ L SRE
Sbjct: 160 WRQTLSTSRE 169


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WKEELHRSR 9
KEEL RSR
Sbjct: 797 LKEELARSR 805


>sp|TRUB_METKA|PROBABLE tRNA pseudouridine synthase B|Methanopyrus kandleri (strain AV19 /

Query: 1 WKEELHRSR 9
WKE LH R
Sbjct: 303 WKEMLHADR 311




524|Sequence|2616|2625|HRSREVRCML

>sp|ARGX_SULAC|GLUTAMATE--LYSW ligase ArgX|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 HRSREVRCML 10
++SR++RC++
Sbjct: 172 YKSRDIRCIV 181




525|Sequence|2621|2630|VRCMLQCPSV

>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 CMLQCP 8
CML CP
Sbjct: 422 CMLACP 427


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 CMLQCP 8
CML CP
Sbjct: 422 CMLACP 427


>sp|FTR_METJA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RCMLQCPS 9
+C+L CP+
Sbjct: 94 QCVLTCPT 101


>sp|HMPTM_METJA|7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN dimethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 RCMLQCP 8
RC L CP
Sbjct: 97 RCNLNCP 103


>sp|HEM12_PYRAR|GLUTAMYL-TRNA reductase 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 RCMLQCPSV 10
RC+L+C V
Sbjct: 228 RCLLECDVV 236


>sp|Y719_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 VRCMLQCPSV 10
+ CM CP V
Sbjct: 30 MECMKYCPGV 39


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VRCMLQC 7
V CML+C
Sbjct: 133 VACMLKC 139


>sp|AGLUS_METJA|ARCHAEAL glutamate synthase [NADPH]|Methanocaldococcus jannaschii (strain

Query: 2 RCMLQCP 8
RC++ CP
Sbjct: 53 RCVVMCP 59


>sp|AGLUS_ARCFU|ARCHAEAL glutamate synthase [NADPH]|Archaeoglobus fulgidus (strain ATCC

Query: 2 RCMLQCPS 9
RC + CP+
Sbjct: 60 RCAVMCPT 67


>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 2 RCMLQCP 8
RC L CP
Sbjct: 169 RCSLFCP 175


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 2 RCMLQCP 8
RC L CP
Sbjct: 165 RCSLFCP 171


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 CMLQCP 8
CM+ CP
Sbjct: 423 CMIACP 428


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 3 CMLQCP 8
CM+ CP
Sbjct: 423 CMIACP 428


>sp|CBIT_METTH|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 VRCMLQC 7
VRC++ C
Sbjct: 21 VRCLIMC 27




526|Sequence|2626|2635|QCPSVEVSFL

>sp|MALE_PYRFU|MALTOTRIOSE-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CPSVEVSF 9
CP VE+ F
Sbjct: 86 CPEVEIVF 93


>sp|MALE_PYRAB|MALTOTRIOSE-BINDING protein|Pyrococcus abyssi (strain GE5 /

Query: 2 CPSVEVSF 9
CP VE+ F
Sbjct: 105 CPDVEIVF 112


>sp|SAT_STAMF|SULFATE adenylyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 1 QCPSVEVSF 9
+ PS+E+S+
Sbjct: 29 ELPSIEISY 37




527|Sequence|2631|2640|EVSFLPLIVN

>sp|PIMT_METVS|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EVSFLPLI 8
EVSF+PLI
Sbjct: 200 EVSFVPLI 207


>sp|PIMT_METM6|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 EVSFLPLI 8
EV+F+PLI
Sbjct: 200 EVAFVPLI 207


>sp|PIMT_METM5|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 EVSFLPLI 8
EV+F+PLI
Sbjct: 200 EVAFVPLI 207


>sp|PIMT_METMP|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EVSFLPLI 8
EV+F+PLI
Sbjct: 200 EVAFVPLI 207


>sp|PIMT_METM7|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 EVSFLPLI 8
EV+F+PLI
Sbjct: 200 EVAFVPLI 207


>sp|MPTA_THEKO|GTP cyclohydrolase MptA|Thermococcus kodakarensis (strain ATCC

Query: 1 EVSFLPLI 8
E +FLPLI
Sbjct: 36 EYTFLPLI 43


>sp|COBS_THEVO|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VSFLPLIVN 10
++FLPL+V
Sbjct: 27 ITFLPLVVT 35




528|Sequence|2636|2645|PLIVNTVALP

>sp|Y1684_METTH|UNCHARACTERIZED protein MTH_1684|Methanothermobacter thermautotrophicus (strain

Query: 1 PLIVNTVALP 10
P I NTVA+P
Sbjct: 281 PEIFNTVAVP 290


>sp|HTR9_HALSA|HALOBACTERIAL transducer protein 9|Halobacterium salinarum (strain ATCC 700922

Query: 1 PLIVNTVALP 10
PL++NT+ +P
Sbjct: 15 PLLLNTLDVP 24




529|Sequence|2641|2650|TVALPDELSY

>sp|RNZ_SACI6|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.16.4 /

Query: 4 LPDELSY 10
LPD+LSY
Sbjct: 281 LPDDLSY 287


>sp|RNZ_SACI4|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.14.25 /

Query: 4 LPDELSY 10
LPD+LSY
Sbjct: 281 LPDDLSY 287


>sp|RNZ_SACI3|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 LPDELSY 10
LPD+LSY
Sbjct: 281 LPDDLSY 287


>sp|RNZ_SACI7|RIBONUCLEASE Z|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 LPDELSY 10
LPD+LSY
Sbjct: 281 LPDDLSY 287


>sp|RNZ_SACI2|RIBONUCLEASE Z|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 LPDELSY 10
LPD+LSY
Sbjct: 281 LPDDLSY 287


>sp|RNZ_SACI1|RIBONUCLEASE Z|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 LPDELSY 10
LPD+LSY
Sbjct: 281 LPDDLSY 287


>sp|RNZ_SACS2|RIBONUCLEASE Z|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 LPDELSY 10
LPD+LSY
Sbjct: 281 LPDDLSY 287


>sp|RL13_METHJ|LARGE ribosomal subunit protein uL13|Methanospirillum hungatei JF-1

Query: 2 VALPDELS 9
V +PDELS
Sbjct: 99 VGVPDELS 106


>sp|CBIA_HALSA|COBYRINATE a,c-diamide synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 ALPDELSY 10
ALPD L+Y
Sbjct: 170 ALPDSLTY 177


>sp|RS3_METM7|SMALL ribosomal subunit protein uS3|Methanococcus maripaludis (strain C7

Query: 2 VALPDELS 9
V+LPDE++
Sbjct: 186 VSLPDEIT 193


>sp|RS3_METM6|SMALL ribosomal subunit protein uS3|Methanococcus maripaludis (strain C6

Query: 2 VALPDELS 9
V+LPDE++
Sbjct: 186 VSLPDEIT 193


>sp|CDC62_METAC|ORC1-TYPE DNA replication protein 2|Methanosarcina acetivorans (strain ATCC

Query: 1 TVALPDELSY 10
+V LP+E+S+
Sbjct: 193 SVFLPEEISF 202


>sp|FBPAP_CENSY|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Cenarchaeum symbiosum (strain A)

Query: 4 LPDELSY 10
+PDEL Y
Sbjct: 336 VPDELEY 342


>sp|CBIA_HALMA|COBYRINATE a,c-diamide synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 ALPDELSY 10
ALP++L+Y
Sbjct: 161 ALPEDLTY 168


>sp|DCD_HYPBU|DCTP deaminase|Hyperthermus butylicus (strain DSM 5456

Query: 1 TVALPDEL 8
TV LPD+L
Sbjct: 88 TVCLPDDL 95


>sp|GLCDH_HALSA|GLUCOSE 1-dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 2 VALPDELS 9
VALPD L+
Sbjct: 135 VALPDSLA 142




530|Sequence|2646|2655|DELSYICTHG

>sp|CDC62_METMA|ORC1-TYPE DNA replication protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DELSYICTHG 10
D+L+Y+C G
Sbjct: 142 DDLNYLCCEG 151


>sp|CDC62_METAC|ORC1-TYPE DNA replication protein 2|Methanosarcina acetivorans (strain ATCC

Query: 1 DELSYICTHG 10
D+L+Y+C G
Sbjct: 142 DDLNYLCCEG 151


>sp|ASSY_THEAC|ARGININOSUCCINATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DELSYICTHG 10
DE+ Y THG
Sbjct: 150 DEVEYAKTHG 159


>sp|SYE_THEPD|GLUTAMATE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 4 SYICTH 9
+Y+CTH
Sbjct: 196 AYVCTH 201


>sp|RL15E_NATPD|LARGE ribosomal subunit protein eL15|Natronomonas pharaonis (strain ATCC

Query: 1 DELSYIC 7
D+LS+IC
Sbjct: 146 DDLSWIC 152


>sp|RL15E_HALMA|LARGE ribosomal subunit protein eL15|Haloarcula marismortui (strain ATCC

Query: 1 DELSYIC 7
D+LS+IC
Sbjct: 146 DDLSWIC 152


>sp|PXPA_PYRFU|5-OXOPROLINASE subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ELSYICTHG 10
E+ IC HG
Sbjct: 216 EVDTICVHG 224


>sp|TRPE_METTM|ANTHRANILATE synthase component 1|Methanothermobacter marburgensis (strain ATCC

Query: 2 ELSYICTHG 10
E SYI HG
Sbjct: 150 ECSYISRHG 158


>sp|T2M6_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 DELSYICTHG 10
+E+SY C +G
Sbjct: 171 NEISYKCPNG 180


>sp|PNPH_PYRFU|6-OXOPURINE nucleoside phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 SYICTHG 10
+Y+CT G
Sbjct: 159 TYVCTEG 165


>sp|RLME_HALSA|RIBOSOMAL RNA large subunit methyltransferase|Halobacterium salinarum (strain

Query: 1 DELSYICTH 9
DE +++ TH
Sbjct: 168 DEFAFVATH 176


>sp|RLME_HALS3|RIBOSOMAL RNA large subunit methyltransferase|Halobacterium salinarum (strain

Query: 1 DELSYICTH 9
DE +++ TH
Sbjct: 168 DEFAFVATH 176


>sp|P936_METJA|PHOSPHODIESTERASE MJ0936|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DELSYICTHG 10
D+L + THG
Sbjct: 89 DDLKFFITHG 98


>sp|RFCS_METS3|REPLICATION factor C small subunit|Methanobrevibacter smithii (strain ATCC

Query: 1 DELSYICT 8
+ L YICT
Sbjct: 165 NRLKYICT 172


>sp|IXTPA_METAC|DITP/XTP pyrophosphatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DELSYICTHG 10
DEL I HG
Sbjct: 41 DELEPIAAHG 50


>sp|ATGT_HALMA|TRNA-GUANINE(15) transglycosylase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DELSYICTH 9
DELSY H
Sbjct: 271 DELSYFPCH 279


>sp|PURL_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloquadratum walsbyi (strain DSM 16790

Query: 4 SYICTHG 10
+Y+CT G
Sbjct: 351 NYVCTFG 357


>sp|Y988_METJA|UNCHARACTERIZED protein MJ0988|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DELSYICTH 9
DE+ ++C H
Sbjct: 10 DEVLFLCHH 18


>sp|NREA_ARCFU|DNA repair protein NreA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DELSYICTHG 10
+ LSY+ HG
Sbjct: 177 EALSYLYNHG 186


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 1 DELSYICTHG 10
+EL I THG
Sbjct: 184 EELIEIATHG 193


>sp|MTIP_METJA|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanocaldococcus jannaschii

Query: 5 YICTHG 10
Y+CT G
Sbjct: 147 YVCTEG 152


>sp|PNPH_KORCO|PROBABLE 6-oxopurine nucleoside phosphorylase|Korarchaeum cryptofilum

Query: 5 YICTHG 10
Y+CT G
Sbjct: 164 YVCTEG 169


>sp|FLAJ_METVO|FLAGELLA accessory protein J|Methanococcus voltae

Query: 1 DELSYICTH 9
+ L Y+CT+
Sbjct: 352 ESLGYLCTN 360




531|Sequence|2651|2660|ICTHGEDWDV

>sp|SAT_STAMF|SULFATE adenylyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 1 ICTHGEDWDV 10
IC HGE++ +
Sbjct: 334 ICPHGEEYRI 343


>sp|GGR_ARCFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 GEDWDV 10
GEDW+V
Sbjct: 138 GEDWEV 143


>sp|RFCL_NANEQ|REPLICATION factor C large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 ICTHGEDWD 9
ICT + WD
Sbjct: 162 ICTANDPWD 170


>sp|PRIS_METJA|DNA primase small subunit PriS|Methanocaldococcus jannaschii (strain

Query: 2 CTHGEDW 8
C H +DW
Sbjct: 106 CKHEDDW 112


>sp|PRIS_METM5|DNA primase small subunit PriS|Methanococcus maripaludis (strain C5 /

Query: 2 CTHGEDW 8
CTH + W
Sbjct: 114 CTHDDSW 120


>sp|PRIS_METM6|DNA primase small subunit PriS|Methanococcus maripaludis (strain C6 /

Query: 2 CTHGEDW 8
CTH + W
Sbjct: 114 CTHDDSW 120


>sp|SAT_AERPE|SULFATE adenylyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ICTHGEDWDV 10
+C HG+++ V
Sbjct: 336 VCPHGDEYRV 345


>sp|AGOG_METMP|N-GLYCOSYLASE/DNA lyase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ICTHGEDW 8
+CT GE W
Sbjct: 63 LCTTGELW 70


>sp|PRIS_METMP|DNA primase small subunit PriS|Methanococcus maripaludis (strain DSM

Query: 2 CTHGEDW 8
CTH + W
Sbjct: 114 CTHDDSW 120


>sp|PRIS_METM7|DNA primase small subunit PriS|Methanococcus maripaludis (strain C7 /

Query: 2 CTHGEDW 8
CTH + W
Sbjct: 114 CTHDDSW 120


>sp|HEM4_METTH|PUTATIVE uroporphyrinogen-III synthase|Methanothermobacter

Query: 1 ICTHGEDWDV 10
+C ++WD+
Sbjct: 43 VCRRADEWDL 52


>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ICTHGEDWDV 10
+ T G +WD+
Sbjct: 101 LSTEGPEWDI 110


>sp|G1PDH_PICTO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Picrophilus torridus (strain ATCC 700027

Query: 4 HGEDWDV 10
HG DW++
Sbjct: 282 HGGDWEL 288


>sp|NEP1_SULTO|RIBOSOMAL RNA small subunit methyltransferase|Sulfurisphaera tokodaii (strain

Query: 1 ICTHGEDW 8
+C GE+W
Sbjct: 161 LCNLGENW 168


>sp|DPHB_METBU|DIPHTHINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 4 HGEDWDV 10
H EDW V
Sbjct: 65 HAEDWLV 71


>sp|AATA_METVS|A-TYPE ATP synthase subunit A|Methanococcus vannielii (strain ATCC 35089

Query: 5 GEDWDV 10
GEDW V
Sbjct: 450 GEDWRV 455


>sp|G1PDH_METMJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanoculleus marisnigri (strain ATCC

Query: 4 HGEDWD 9
HG DW+
Sbjct: 293 HGGDWE 298


>sp|G1PDH_METAR|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanocella arvoryzae (strain DSM 22066

Query: 4 HGEDWD 9
HG DW+
Sbjct: 276 HGGDWE 281


>sp|DNAK_HALLT|CHAPERONE protein DnaK|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 GEDWD 9
G+DWD
Sbjct: 203 GDDWD 207


>sp|NADM_HALLT|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 HGEDW 8
HG DW
Sbjct: 135 HGRDW 139


>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 4 HGEDWDV 10
+ EDWD+
Sbjct: 349 YNEDWDL 355


>sp|DNAK_HALMA|CHAPERONE protein DnaK|Haloarcula marismortui (strain ATCC 43049

Query: 5 GEDWD 9
G+DWD
Sbjct: 202 GDDWD 206


>sp|PXPA_THESM|5-OXOPROLINASE subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 1 ICTHGED 7
IC HG++
Sbjct: 220 ICVHGDN 226


>sp|PXPA_THEON|5-OXOPROLINASE subunit A|Thermococcus onnurineus (strain NA1)

Query: 1 ICTHGED 7
IC HG++
Sbjct: 220 ICVHGDN 226


>sp|PXPA_PYRHO|5-OXOPROLINASE subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ICTHGED 7
IC HG++
Sbjct: 220 ICVHGDN 226


>sp|PXPA_PYRFU|5-OXOPROLINASE subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ICTHGED 7
IC HG++
Sbjct: 220 ICVHGDN 226


>sp|PXPA_PYRAB|5-OXOPROLINASE subunit A|Pyrococcus abyssi (strain GE5 /

Query: 1 ICTHGED 7
IC HG++
Sbjct: 220 ICVHGDN 226


>sp|NADM_ARCFU|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 GEDWD 9
GEDW+
Sbjct: 142 GEDWE 146


>sp|NADM_METLZ|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 HGEDWD 9
HGE W+
Sbjct: 136 HGEAWE 141


>sp|DHQS_METTH|3-DEHYDROQUINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 GEDWDV 10
GEDW +
Sbjct: 124 GEDWKI 129


>sp|DNAK_NATPD|CHAPERONE protein DnaK|Natronomonas pharaonis (strain ATCC 35678

Query: 5 GEDWD 9
G+DWD
Sbjct: 203 GDDWD 207


>sp|ALAXL_PYRHO|ALANYL-TRNA editing protein AlaX-L|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ICTHGEDWDV 10
+ TH E+W++
Sbjct: 309 VITHVENWNM 318


>sp|Y1947_ARCFU|UNCHARACTERIZED protein AF_1947|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CTHGEDWD 9
CT GED D
Sbjct: 157 CTKGEDAD 164


>sp|ENO_THEKO|ENOLASE kodakarensis (strain ATCC BAA-918

Query: 4 HGEDWD 9
H EDW+
Sbjct: 292 HEEDWE 297


>sp|ENO_THEGJ|ENOLASE gammatolerans (strain DSM 15229

Query: 4 HGEDWD 9
H EDW+
Sbjct: 292 HEEDWE 297


>sp|ENO_PYRHO|ENOLASE horikoshii (strain ATCC 700860

Query: 4 HGEDWD 9
H EDW+
Sbjct: 290 HEEDWE 295


>sp|ENO_PYRFU|ENOLASE furiosus (strain ATCC 43587

Query: 4 HGEDWD 9
H EDW+
Sbjct: 292 HEEDWE 297


>sp|ENO_PYRAB|ENOLASE abyssi (strain GE5 /

Query: 4 HGEDWD 9
H EDW+
Sbjct: 290 HEEDWE 295


>sp|DNAK_HALWD|CHAPERONE protein DnaK|Haloquadratum walsbyi (strain DSM 16790

Query: 5 GEDWD 9
G+DWD
Sbjct: 203 GDDWD 207


>sp|DNAK_HALMT|CHAPERONE protein DnaK|Haloferax mediterranei (strain ATCC 33500

Query: 5 GEDWD 9
G+DWD
Sbjct: 203 GDDWD 207


>sp|EF1A_METBU|ELONGATION factor 1-alpha|Methanococcoides burtonii (strain DSM 6242

Query: 4 HGEDWD 9
H E+WD
Sbjct: 273 HHEEWD 278


>sp|TOP6A_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 ICTHGEDW 8
IC G+ W
Sbjct: 235 ICNDGDPW 242


>sp|DNAK_HALSA|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 700922

Query: 5 GEDWD 9
G+DWD
Sbjct: 202 GDDWD 206


>sp|DNAK_HALS3|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 29341

Query: 5 GEDWD 9
G+DWD
Sbjct: 202 GDDWD 206


>sp|SYW1_HALSA|TRYPTOPHAN--TRNA ligase 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 CTHGEDW 8
CT DW
Sbjct: 278 CTEAADW 284


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 THGEDW 8
TH E+W
Sbjct: 1202 THDEEW 1207


>sp|FEN_HALSA|FLAP endonuclease 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 ICTHGEDWDV 10
I HG+ WDV
Sbjct: 243 IGEHGDLWDV 252


>sp|FEN_HALS3|FLAP endonuclease 1|Halobacterium salinarum (strain ATCC 29341

Query: 1 ICTHGEDWDV 10
I HG+ WDV
Sbjct: 243 IGEHGDLWDV 252




532|Sequence|2656|2665|EDWDVAYIIH

>sp|G1PDH_METST|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosphaera stadtmanae (strain ATCC

Query: 1 EDWDVAY 7
EDW +AY
Sbjct: 177 EDWKLAY 183


>sp|NIFD_METTL|NITROGENASE molybdenum-iron protein alpha chain|Methanothermococcus

Query: 2 DWDVAYI 8
DWDVA I
Sbjct: 217 DWDVAVI 223


>sp|ENDA_PYRHO|TRNA-SPLICING endonuclease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EDWDVAYIIH 10
ED+D+ YI++
Sbjct: 78 EDFDIKYIVY 87


>sp|ENDA_PYRFU|TRNA-SPLICING endonuclease|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EDWDVAYIIH 10
ED+DV Y+++
Sbjct: 78 EDFDVKYLVY 87


>sp|NADK_THEON|NAD kinase|Thermococcus onnurineus (strain NA1)

Query: 1 EDWDVAYII 9
ED+DV +II
Sbjct: 54 EDFDVDFII 62


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 3 WDVAYI 8
WDV+Y+
Sbjct: 972 WDVSYL 977


>sp|G1PDH_KORCO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Korarchaeum cryptofilum (strain OPF8)

Query: 2 DWDVAY 7
DW++AY
Sbjct: 141 DWELAY 146


>sp|IDI2_THEVO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 WDVAYIIH 10
WD Y++H
Sbjct: 25 WDDVYLMH 32


>sp|ENDA_PYRAB|TRNA-SPLICING endonuclease|Pyrococcus abyssi (strain GE5 /

Query: 1 EDWDVAYIIH 10
ED+D+ Y+++
Sbjct: 78 EDFDIKYLVY 87


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 3 WDVAYII 9
WD++Y+I
Sbjct: 689 WDLSYLI 695


>sp|KDPA_HALSA|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 1 EDWDVAY 7
E WD+A+
Sbjct: 115 ESWDLAF 121


>sp|KDPA_HALS3|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 1 EDWDVAY 7
E WD+A+
Sbjct: 115 ESWDLAF 121


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 2 DWDVA 6
DWD+A
Sbjct: 603 DWDIA 607


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 DWDVA 6
DWD+A
Sbjct: 603 DWDIA 607


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 DWDVA 6
DWD+A
Sbjct: 603 DWDIA 607


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 DWDVA 6
DWD+A
Sbjct: 603 DWDIA 607


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 DWDVA 6
DWD+A
Sbjct: 603 DWDIA 607


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 DWDVA 6
DWD+A
Sbjct: 603 DWDIA 607


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 DWDVA 6
DWD+A
Sbjct: 603 DWDIA 607


>sp|SYFB_METMA|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 DVAYIIH 10
DV Y++H
Sbjct: 401 DVTYVLH 407


>sp|SYFB_METBF|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina barkeri (strain Fusaro /

Query: 4 DVAYIIH 10
DV Y++H
Sbjct: 401 DVTYVLH 407


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 2 DWDVA 6
DWD+A
Sbjct: 604 DWDIA 608


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 2 DWDVA 6
DWD+A
Sbjct: 604 DWDIA 608


>sp|SYT_THEPD|THREONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 EDWDVAY 7
+DW+++Y
Sbjct: 294 KDWEISY 300


>sp|SYFB_METAC|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 DVAYIIH 10
DV Y++H
Sbjct: 401 DVTYVLH 407


>sp|MTM2_METJA|TYPE II methyltransferase M.MjaII|Methanocaldococcus jannaschii

Query: 2 DWDVAY 7
DWD+A+
Sbjct: 87 DWDLAF 92


>sp|RFCL_NANEQ|REPLICATION factor C large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 WDVAY 7
WD+AY
Sbjct: 214 WDIAY 218


>sp|RNZ_PYRAR|RIBONUCLEASE Z|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 DWDVAY 7
+WDV Y
Sbjct: 134 EWDVGY 139




533|Sequence|2661|2670|AYIIHLYPSL

>sp|HYPA_IGNH4|HYDROGENASE maturation factor HypA|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 IIHLYPSL 10
+IHLYP L
Sbjct: 97 VIHLYPHL 104


>sp|Y021_METJA|PUTATIVE glycyl-radical enzyme activating enzyme|Methanocaldococcus

Query: 1 AYIIHLYPS 9
AYI LYP+
Sbjct: 345 AYISELYPT 353


>sp|Y284_METJA|UNCHARACTERIZED protein MJ0284|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YIIHLYPS 9
Y IH YP+
Sbjct: 154 YTIHNYPT 161


>sp|Y709_METJA|UNCHARACTERIZED transporter MJ0709|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YIIHLYPSL 10
YII +YP+L
Sbjct: 106 YIIAVYPNL 114


>sp|MTRC_METM5|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain

Query: 2 YIIHLYPS 9
YI H +PS
Sbjct: 31 YIAHFFPS 38


>sp|Y620_PYRFU|UPF0251 protein PF0620|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YIIHLYPSL 10
Y H YP+L
Sbjct: 20 YARHFYPAL 28


>sp|AGLB1_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YIIHLYPSL 10
Y+++L PSL
Sbjct: 672 YVVYLTPSL 680




534|Sequence|2666|2675|LYPSLTLRNL

>sp|XACJ_HALVD|XYLOSE/ARABINOSE import ATP-binding protein XacJ|Haloferax volcanii (strain ATCC

Query: 1 LYPSLTLR 8
LYP +T+R
Sbjct: 86 LYPHMTVR 93


>sp|Y2595_SACS2|UPF0310 protein SSO2595|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LYPSLTLRN 9
+YP T+RN
Sbjct: 71 IYPEETVRN 79


>sp|APGM_METTP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanothrix thermoacetophila (strain DSM

Query: 1 LYPSLTLRNL 10
+YP ++ RN+
Sbjct: 135 IYPGVSYRNI 144


>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain DSM

Query: 4 SLTLRNL 10
S+TLRNL
Sbjct: 274 SITLRNL 280


>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 4 SLTLRNL 10
S+TLRNL
Sbjct: 285 SITLRNL 291


>sp|SYFB_METM7|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C7 /

Query: 2 YPSLTLRN 9
YP LTL++
Sbjct: 273 YPDLTLKS 280




535|Sequence|2671|2680|TLRNLLPYSL

>sp|FAU1_IGNH4|PROBABLE ribonuclease FAU-1|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 TLRNLLPYSL 10
TLR +PYS+
Sbjct: 76 TLRKSMPYSV 85


>sp|RL13_METJA|LARGE ribosomal subunit protein uL13|Methanocaldococcus jannaschii

Query: 1 TLRNLLPY 8
T+R +LPY
Sbjct: 79 TIRKMLPY 86


>sp|GLYA_SULTO|SERINE hydroxymethyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TLRNLLPY 8
T +NLLPY
Sbjct: 342 TNKNLLPY 349


>sp|Y574_METTH|UNCHARACTERIZED protein MTH_574|Methanothermobacter thermautotrophicus (strain

Query: 2 LRNLLPYS 9
+RN+ PYS
Sbjct: 27 IRNIAPYS 34


>sp|RLSX_METTH|FUSED uL13/uS9 ribosomal subunit protein|Methanothermobacter

Query: 1 TLRNLLPY 8
T+R +LPY
Sbjct: 81 TVRGMLPY 88


>sp|RL13_METBU|LARGE ribosomal subunit protein uL13|Methanococcoides burtonii (strain

Query: 1 TLRNLLPY 8
T+R +LPY
Sbjct: 75 TVRGMLPY 82


>sp|GLYA_KORCO|SERINE hydroxymethyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 RNLLPYSL 10
RNLLP+ +
Sbjct: 352 RNLLPWDI 359


>sp|RL13_METMA|LARGE ribosomal subunit protein uL13|Methanosarcina mazei (strain ATCC

Query: 1 TLRNLLPY 8
T+R +LPY
Sbjct: 76 TIRGMLPY 83


>sp|GLYA_SULAC|SERINE hydroxymethyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 3 RNLLPY 8
+NLLPY
Sbjct: 344 KNLLPY 349


>sp|GLYA_SACS2|SERINE hydroxymethyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 3 RNLLPY 8
+NLLPY
Sbjct: 343 KNLLPY 348


>sp|GLYA_SACI7|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.G.57.14

Query: 3 RNLLPY 8
+NLLPY
Sbjct: 343 KNLLPY 348


>sp|GLYA_SACI6|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 RNLLPY 8
+NLLPY
Sbjct: 343 KNLLPY 348


>sp|GLYA_SACI4|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 RNLLPY 8
+NLLPY
Sbjct: 343 KNLLPY 348


>sp|GLYA_SACI3|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 3 RNLLPY 8
+NLLPY
Sbjct: 343 KNLLPY 348


>sp|GLYA_SACI2|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 3 RNLLPY 8
+NLLPY
Sbjct: 343 KNLLPY 348


>sp|GLYA_SACI1|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.N.15.51

Query: 3 RNLLPY 8
+NLLPY
Sbjct: 343 KNLLPY 348


>sp|RL13_METBF|LARGE ribosomal subunit protein uL13|Methanosarcina barkeri (strain

Query: 1 TLRNLLPY 8
T+R +LPY
Sbjct: 76 TIRGMLPY 83


>sp|RL13_METAC|LARGE ribosomal subunit protein uL13|Methanosarcina acetivorans (strain

Query: 1 TLRNLLPY 8
T+R +LPY
Sbjct: 79 TIRGMLPY 86


>sp|RL13_METHJ|LARGE ribosomal subunit protein uL13|Methanospirillum hungatei JF-1

Query: 1 TLRNLLPY 8
T+R ++PY
Sbjct: 76 TIRGMIPY 83


>sp|GLYA_HYPBU|SERINE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 3 RNLLPY 8
+NLLPY
Sbjct: 352 KNLLPY 357


>sp|SYFB_PYRFU|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LRNLLPYSL 10
LRN+ PY +
Sbjct: 97 LRNIRPYGV 105


>sp|COBS_THEGJ|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermococcus gammatolerans (strain DSM

Query: 2 LRNLLPY 8
+RNLLP+
Sbjct: 1 MRNLLPF 7




536|Sequence|2676|2685|LPYSLRYLLE

>sp|DAPA_METM7|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C7 /

Query: 2 PYSLRYLLE 10
PY+++YL E
Sbjct: 143 PYTIKYLFE 151


>sp|COPP_THEAC|BIFUNCTIONAL phosphopantetheine adenylyltransferase/NTP

Query: 1 LPYSLRY 7
+PYS+RY
Sbjct: 49 IPYSVRY 55


>sp|MPGS_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PYSLRYLLE 10
PY + YLLE
Sbjct: 272 PYEIVYLLE 280


>sp|MPGS_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 PYSLRYLLE 10
PY + YLLE
Sbjct: 272 PYEIVYLLE 280


>sp|DPOL_ARCFU|DNA polymerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LPYSLRYLLE 10
+P++ RYL++
Sbjct: 114 IPFAYRYLID 123


>sp|UBIX_THEAC|FLAVIN prenyltransferase UbiX|Thermoplasma acidophilum (strain ATCC

Query: 1 LPYSLRYL 8
+PY++R+L
Sbjct: 13 IPYAVRFL 20


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 LPYSLRYLLE 10
+P++LR++++
Sbjct: 126 IPFALRFIID 135


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LPYSLRYLLE 10
+P++ RYL++
Sbjct: 114 IPFAKRYLID 123


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 1 LPYSLRYLLE 10
+P++ RYL++
Sbjct: 81 IPFAKRYLID 90


>sp|PGK_THESM|PHOSPHOGLYCERATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 3 YSLRYLLE 10
+++RYLLE
Sbjct: 40 HTIRYLLE 47


>sp|HYD1B_PYRFU|SULFHYDROGENASE 1 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 4 SLRYLLE 10
+LRYLLE
Sbjct: 212 NLRYLLE 218


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 1 LPYSLRYLLE 10
+P++ RYL++
Sbjct: 114 IPFAKRYLID 123


>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LPYSLRYLLE 10
+P++ RYL++
Sbjct: 114 IPFAKRYLID 123


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 1 LPYSLRYLLE 10
+P++ RYL++
Sbjct: 114 IPFAKRYLID 123


>sp|CCA_PYRNV|CCA-ADDING enzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LPYSLRY 7
+P+SLRY
Sbjct: 94 VPWSLRY 100


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 1 LPYSLRYLLE 10
+P++ RYL++
Sbjct: 114 IPFAKRYLID 123


>sp|RS4E_IGNH4|SMALL ribosomal subunit protein eS4|Ignicoccus hospitalis (strain KIN4/I

Query: 1 LPYSLRYLL 9
+PY ++YL+
Sbjct: 104 IPYPVKYLV 112


>sp|MPGS_PYRHO|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PYSLRYLLE 10
PY + Y+LE
Sbjct: 272 PYEIVYILE 280


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 LPYSLRYLLE 10
+P++ RYL++
Sbjct: 114 IPFAKRYLID 123


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LPYSLRYLLE 10
+P++ RYL++
Sbjct: 123 IPFAKRYLID 132


>sp|FTTA_THEKO|TRANSCRIPTION termination factor FttA|Thermococcus kodakarensis (strain ATCC

Query: 1 LPYSLRYLL 9
LPY RY L
Sbjct: 262 LPYLFRYKL 270


>sp|DPOL_PYRAY|DNA polymerase 1|Pyrococcus abyssi

Query: 1 LPYSLRYLLE 10
+P++ RYL++
Sbjct: 114 IPFAKRYLID 123


>sp|DPOL_PYRAB|DNA polymerase 1|Pyrococcus abyssi (strain GE5 /

Query: 1 LPYSLRYLLE 10
+P++ RYL++
Sbjct: 114 IPFAKRYLID 123


>sp|DPOL_THES9|DNA polymerase|Thermococcus sp. (strain 9oN-7)

Query: 1 LPYSLRYLLE 10
+P++ RYL++
Sbjct: 114 IPFAKRYLID 123


>sp|DPOL_THEGO|DNA polymerase|Thermococcus gorgonarius

Query: 1 LPYSLRYLLE 10
+P++ RYL++
Sbjct: 114 IPFAKRYLID 123


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 1 LPYSLRYLLE 10
+P++ RYL++
Sbjct: 114 IPFAKRYLID 123




537|Sequence|2681|2690|RYLLEGTAET

>sp|PURL_HALSA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 700922

Query: 1 RYLLEGTAE 9
RYLL+G E
Sbjct: 129 RYLLDGVVE 137


>sp|PURL_HALS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 29341

Query: 1 RYLLEGTAE 9
RYLL+G E
Sbjct: 129 RYLLDGVVE 137


>sp|NADM2_SULAC|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RYLLEGTAE 9
RY++EG E
Sbjct: 135 RYIIEGNEE 143


>sp|PURL_HALMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloarcula marismortui (strain ATCC 43049

Query: 1 RYLLEGTAE 9
RYL EG E
Sbjct: 133 RYLFEGVVE 141


>sp|PURL_HALLT|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 RYLLEGTAE 9
RYL EG E
Sbjct: 145 RYLFEGVVE 153


>sp|GUAAB_SACS2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 RYLLEGT 7
RYL++GT
Sbjct: 122 RYLMQGT 128


>sp|TRPF_HALMA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Haloarcula marismortui (strain ATCC 43049

Query: 1 RYLLEGTAET 10
R + EGTAET
Sbjct: 38 REVDEGTAET 47


>sp|GGGPS_PYRNV|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 YLLEGT 7
YLLEGT
Sbjct: 6 YLLEGT 11




538|Sequence|2686|2695|GTAETHELAE

>sp|RSMA_METBU|PROBABLE ribosomal RNA small subunit|Methanococcoides burtonii (strain DSM

Query: 4 ETHELAE 10
E HELAE
Sbjct: 252 EPHELAE 258


>sp|TRPF_META3|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GTAETHEL 8
GT +TH+L
Sbjct: 139 GTGKTHDL 146


>sp|CBIT_THEAC|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 GTAETHELAE 10
GTA H+L E
Sbjct: 123 GTARIHDLFE 132


>sp|IORB_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorB|Archaeoglobus fulgidus (strain ATCC

Query: 2 TAETHELAE 10
TAETH +A+
Sbjct: 35 TAETHGMAQ 43


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 1 GTAETHEL 8
GT++ HEL
Sbjct: 315 GTSKVHEL 322


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GTAETHELAE 10
GTAET +AE
Sbjct: 252 GTAETWIIAE 261




539|Sequence|2691|2700|HELAEGSTAD

>sp|TF2B_METTL|TRANSCRIPTION initiation factor IIB|Methanothermococcus thermolithotrophicus

Query: 2 ELAEGSTAD 10
E+AEGS D
Sbjct: 216 EIAEGSRVD 224


>sp|YR18_THEPE|UNCHARACTERIZED 18.7 kDa protein in|Thermofilum pendens

Query: 3 LAEGSTA 9
LAEGSTA
Sbjct: 94 LAEGSTA 100


>sp|FPRA_METAZ|COENZYME F420H(2) oxidase|Methanobrevibacter arboriphilus

Query: 1 HELAEGSTAD 10
HE+AEG A+
Sbjct: 279 HEIAEGIMAE 288




540|Sequence|2696|2705|GSTADVLHSR

>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GSTADVLH 8
G TAD+LH
Sbjct: 20 GETADLLH 27


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 GSTADVLHSR 10
G+TADV+ +R
Sbjct: 75 GATADVIVAR 84


>sp|COOS_METJA|CARBON monoxide dehydrogenase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GSTADVLHSR 10
G+TADV+ +R
Sbjct: 66 GATADVIVAR 75


>sp|SYFB_METAR|PHENYLALANINE--TRNA ligase beta subunit|Methanocella arvoryzae (strain DSM 22066

Query: 4 ADVLHSR 10
AD+LH R
Sbjct: 326 ADILHKR 332


>sp|PYLS_METAC|PYRROLYSINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GSTADVLH 8
G+T DV+H
Sbjct: 374 GNTLDVMH 381


>sp|PYLS_METTE|PYRROLYSINE--TRNA ligase|Methanosarcina thermophila

Query: 1 GSTADVLH 8
G T DV+H
Sbjct: 409 GDTLDVMH 416


>sp|COAD_METJA|PHOSPHOPANTETHEINE adenylyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GSTADVLH 8
G T D+LH
Sbjct: 6 GGTFDILH 13


>sp|COOS1_METMA|CARBON monoxide dehydrogenase 1|Methanosarcina mazei (strain ATCC

Query: 1 GSTADVLHSR 10
G+TAD++ +R
Sbjct: 76 GATADIIVAR 85


>sp|COOS1_METAC|CARBON monoxide dehydrogenase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 GSTADVLHSR 10
G+TAD++ +R
Sbjct: 76 GATADIIVAR 85


>sp|COAD_PYRAE|PHOSPHOPANTETHEINE adenylyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GSTADVLHS 9
G T D LHS
Sbjct: 11 GGTFDTLHS 19




541|Sequence|2701|2710|VLHSRISGEI

>sp|GUAAB_METBU|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcoides

Query: 2 LHSRISGEI 10
+ SRISGEI
Sbjct: 275 IESRISGEI 283


>sp|MDH_METST|MALATE dehydrogenase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 HSRISGEI 10
H R+ GEI
Sbjct: 39 HERVKGEI 46


>sp|LYSY_CALMQ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 HSRISGEI 10
H+R+SG I
Sbjct: 250 HARLSGSI 257


>sp|SFSA_PYRFU|SUGAR fermentation stimulation protein homolog|Pyrococcus furiosus

Query: 2 LHSRISGEI 10
LH +SGEI
Sbjct: 212 LHMELSGEI 220


>sp|Y163_ARCFU|UNCHARACTERIZED protein AF_0163|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VLHSRISGEI 10
+ H+ +SGE+
Sbjct: 138 IFHATLSGEL 147




542|Sequence|2706|2715|ISGEIMELVL

>sp|Y384_ARCFU|UPF0252 protein AF_0384|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ISGEIMELVL 10
I G++ME+VL
Sbjct: 300 IKGDVMEIVL 309


>sp|SYE_NITMS|GLUTAMATE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 ISGEIMELV 9
ISGEI E+V
Sbjct: 47 ISGEISEIV 55


>sp|TRF2_THEVO|TRICORN protease-interacting factor F2|Thermoplasma volcanium (strain

Query: 1 ISGEIMELVL 10
+SGE ELVL
Sbjct: 29 LSGEANELVL 38




543|Sequence|2711|2720|MELVLVKYQG

>sp|RS17_SACS2|SMALL ribosomal subunit protein uS17|Saccharolobus solfataricus (strain

Query: 1 MELVLVKYQG 10
+E V+VKY+G
Sbjct: 41 LEGVIVKYRG 50


>sp|RF1_AERPE|PEPTIDE chain release factor subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 ELVLVKYQG 10
ELV V YQG
Sbjct: 251 ELVDVAYQG 259




544|Sequence|2716|2725|VKYQGKNWNG

>sp|G1PDH_CENSY|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Cenarchaeum symbiosum (strain A)

Query: 2 KYQGKNWNG 10
K QG++W G
Sbjct: 284 KLQGQDWKG 292


>sp|CP119_SULTO|CYTOCHROME P450 119|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VKYQGKNWN 9
V Y GK WN
Sbjct: 14 VYYDGKVWN 22


>sp|SYT_NATPD|THREONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 GKNWNG 10
G+NW+G
Sbjct: 474 GRNWDG 479


>sp|DHQS_META3|3-DEHYDROQUINATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 QGKNWN 9
+GK+WN
Sbjct: 110 EGKDWN 115


>sp|PNCB_METAC|NICOTINATE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 2 KYQGKNWNG 10
++ GK W+G
Sbjct: 137 EWNGKEWDG 145


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VKYQGKNW 8
V+Y+GKN+
Sbjct: 245 VEYEGKNF 252


>sp|FDHB_METFO|F420-DEPENDENT formate dehydrogenase subunit beta|Methanobacterium formicicum

Query: 2 KYQGKNW 8
K+QG +W
Sbjct: 268 KWQGNDW 274


>sp|SYC_METVS|CYSTEINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 YQGKNW 8
Y GKNW
Sbjct: 244 YSGKNW 249


>sp|SYC_METM6|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 VKYQGKNW 8
V Y GK+W
Sbjct: 242 VAYSGKDW 249


>sp|SYC_METM7|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 VKYQGKNW 8
V Y GK+W
Sbjct: 242 VAYSGKDW 249


>sp|RS4E_METKA|SMALL ribosomal subunit protein eS4|Methanopyrus kandleri (strain AV19 /

Query: 3 YQGKNW 8
+ GKNW
Sbjct: 146 HDGKNW 151




545|Sequence|2721|2730|KNWNGHFRIR

>sp|COBD_METTH|PROBABLE cobalamin biosynthesis protein CobD|Methanothermobacter

Query: 2 NWNGHFRI 9
NW G FRI
Sbjct: 216 NWRGSFRI 223


>sp|APGM2_METJA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanocaldococcus jannaschii (strain

Query: 4 NGHFRIR 10
NGH RIR
Sbjct: 381 NGHLRIR 387


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 5 GHFRIR 10
GHFR+R
Sbjct: 190 GHFRVR 195


>sp|TF2B2_HALVD|TRANSCRIPTION initiation factor IIB 2|Haloferax volcanii (strain ATCC 29605

Query: 1 KNWNGHFRIR 10
+ WN FR R
Sbjct: 128 RTWNERFRTR 137


>sp|TF2B6_HALSA|TRANSCRIPTION initiation factor IIB 6|Halobacterium salinarum (strain ATCC 700922

Query: 1 KNWNGHFRIR 10
+ WN FR R
Sbjct: 116 RKWNERFRTR 125


>sp|TF2B2_HALSA|TRANSCRIPTION initiation factor IIB 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 KNWNGHFRIR 10
+ WN FR R
Sbjct: 123 RKWNERFRTR 132


>sp|EF2_CENSY|ELONGATION factor 2|Cenarchaeum symbiosum (strain A)

Query: 3 WNGHFR 8
WN HF+
Sbjct: 688 WNSHFK 693


>sp|TF2B4_HALSA|TRANSCRIPTION initiation factor IIB 4|Halobacterium salinarum (strain ATCC 700922

Query: 1 KNWNGHFRIR 10
+ WN FR R
Sbjct: 123 RKWNERFRTR 132


>sp|AHBC_METBF|FE-COPROPORPHYRIN III synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 NGHFRIR 10
NG+FR+R
Sbjct: 366 NGNFRVR 372


>sp|TRM56_PYRFU|TRNA (cytidine(56)-2'-O)-methyltransferase|Pyrococcus furiosus (strain

Query: 1 KNWNGHFRIR 10
K W G F IR
Sbjct: 52 KRWGGSFFIR 61


>sp|RLME_THEAC|RIBOSOMAL RNA large subunit methyltransferase|Thermoplasma acidophilum

Query: 1 KNWNGHFR 8
KNW +FR
Sbjct: 163 KNWGHYFR 170


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 NGHFRIR 10
NGH RI+
Sbjct: 71 NGHVRIK 77


>sp|CAPPA_METBF|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 3 WNGHF 7
W GHF
Sbjct: 182 WKGHF 186


>sp|Y790_METJA|UNCHARACTERIZED protein MJ0790|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NWNGH 6
NW GH
Sbjct: 2 NWKGH 6


>sp|AMPPA_METJA|AMP phosphorylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NWNGH 6
NW GH
Sbjct: 155 NWEGH 159


>sp|DNLI_METJA|DNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KNWNGHFRI 9
K+W G F I
Sbjct: 461 KDWYGSFEI 469


>sp|TRM56_THEPD|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermofilum pendens (strain

Query: 1 KNWNGHFRI 9
+NW G F++
Sbjct: 57 ENWGGDFKV 65


>sp|CAPPA_METTH|PHOSPHOENOLPYRUVATE carboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 KNWNGHFR 8
K W G FR
Sbjct: 165 KEWIGEFR 172


>sp|CAS1B_METRM|CRISPR-ASSOCIATED protein Cas1 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 2 NWNGHFRIR 10
NW GH R
Sbjct: 66 NWKGHVDYR 74


>sp|TRM56_METST|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosphaera stadtmanae

Query: 1 KNWNGHFRI 9
+NW G F +
Sbjct: 52 ENWGGDFEV 60


>sp|TRM56_METMA|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosarcina mazei

Query: 1 KNWNGHFRIR 10
+ W G+F I+
Sbjct: 53 RRWGGNFYIK 62


>sp|TRM56_METVS|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus vannielii

Query: 1 KNWNGHFR 8
K+W G F+
Sbjct: 52 KSWGGEFK 59


>sp|Y819_PYRHO|UNCHARACTERIZED methyltransferase PH0819|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KNWNGH 6
K W GH
Sbjct: 217 KRWRGH 222




546|Sequence|2726|2735|HFRIRDTLPE

>sp|Y993_METJA|PUTATIVE hydrogenase expression/formation protein

Query: 2 FRIRDTLPE 10
+ IRD LPE
Sbjct: 43 YGIRDVLPE 51


>sp|TRUD_PYRHO|PROBABLE tRNA pseudouridine synthase D|Pyrococcus horikoshii (strain ATCC

Query: 3 RIRDTLPE 10
R+RDT PE
Sbjct: 131 RVRDTTPE 138


>sp|PYRF_AERPE|OROTIDINE 5'-phosphate decarboxylase|Aeropyrum pernix (strain ATCC 700893

Query: 3 RIRDTLP 9
R+R+TLP
Sbjct: 169 RVRETLP 175


>sp|MRE11_METAC|DNA double-strand break repair protein|Methanosarcina acetivorans

Query: 3 RIRDTLPE 10
RI++TLPE
Sbjct: 314 RIKETLPE 321


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 3 RIRDTLP 9
RIR+TLP
Sbjct: 962 RIRETLP 968


>sp|IF2P_METTH|PROBABLE translation initiation factor IF-2|Methanothermobacter

Query: 2 FRIRDTLP 9
F IR+TLP
Sbjct: 63 FSIRETLP 70


>sp|CBIA_HALMA|COBYRINATE a,c-diamide synthase|Haloarcula marismortui (strain ATCC 43049

Query: 4 IRDTLPE 10
IRD LPE
Sbjct: 158 IRDALPE 164


>sp|SPEH_METMP|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus maripaludis (strain DSM

Query: 1 HFRIRDTLPE 10
H + DT+PE
Sbjct: 86 HVKPEDTIPE 95


>sp|PRIL_PYRFU|DNA primase large subunit PriL|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FRIRDTLPE 10
+ IRD LPE
Sbjct: 186 YEIRDELPE 194


>sp|MOAA_METS5|PROBABLE GTP 3',8-cyclase|Metallosphaera sedula (strain ATCC 51363

Query: 1 HFRIRDTLP 9
HFR R TLP
Sbjct: 221 HFRPRYTLP 229


>sp|PRIL_PYRHO|DNA primase large subunit PriL|Pyrococcus horikoshii (strain ATCC

Query: 2 FRIRDTLPE 10
+ IRD LPE
Sbjct: 186 YEIRDELPE 194


>sp|ACDB1_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 3 RIRDTLPE 10
R++D +PE
Sbjct: 651 RVKDAIPE 658


>sp|Y1715_METAC|UPF0280 protein MA_1715|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HFRIRDTL 8
HF++R+T+
Sbjct: 20 HFQLRETI 27


>sp|ACDB2_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 3 RIRDTLPE 10
R++D +PE
Sbjct: 358 RVKDAIPE 365


>sp|SYE_METM5|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 RIRDTLPE 10
+ RDT+PE
Sbjct: 206 KCRDTIPE 213


>sp|Y136_METHJ|UPF0280 protein Mhun_0136|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 HFRIRDTL 8
HF +R+T+
Sbjct: 6 HFELRETI 13


>sp|FAU1_HYPBU|PROBABLE ribonuclease FAU-1|Hyperthermus butylicus (strain DSM 5456

Query: 3 RIRDTLP 9
++RDTLP
Sbjct: 81 KLRDTLP 87




547|Sequence|2731|2740|DTLPEFFPVC

>sp|ATGT_KORCO|TRNA-GUANINE(15) transglycosylase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 LPEFFPV 9
LPEFFPV
Sbjct: 28 LPEFFPV 34


>sp|CDC62_METAC|ORC1-TYPE DNA replication protein 2|Methanosarcina acetivorans (strain ATCC

Query: 1 DTLPEFFP 8
D LPE+FP
Sbjct: 23 DYLPEYFP 30


>sp|CDC62_METMA|ORC1-TYPE DNA replication protein 2|Methanosarcina mazei (strain ATCC

Query: 1 DTLPEFFP 8
D LPE+FP
Sbjct: 23 DYLPEYFP 30


>sp|PRIL_PYRHO|DNA primase large subunit PriL|Pyrococcus horikoshii (strain ATCC

Query: 4 PEFFPVC 10
PEFFP C
Sbjct: 225 PEFFPPC 231


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 2 TLPEFF 7
TLPEFF
Sbjct: 449 TLPEFF 454


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TLPEFF 7
TLPEFF
Sbjct: 449 TLPEFF 454


>sp|BIOD_NITMS|ATP-DEPENDENT dethiobiotin synthetase BioD|Nitrosopumilus maritimus (strain

Query: 4 PEFFPV 9
P+FFP+
Sbjct: 72 PQFFPI 77


>sp|SYT_METST|THREONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 TLPEFFPVC 10
T+P+F VC
Sbjct: 339 TMPDFHSVC 347


>sp|AGLG_HALVD|GLUCOSYL-DOLICHYL phosphate glucuronosyltransferase|Haloferax volcanii (strain ATCC

Query: 4 PEFFP 8
PEFFP
Sbjct: 129 PEFFP 133


>sp|PRIL_METMA|DNA primase large subunit PriL|Methanosarcina mazei (strain ATCC

Query: 4 PEFFPVC 10
PE FP C
Sbjct: 224 PELFPPC 230


>sp|RL2_METTP|LARGE ribosomal subunit protein uL2|Methanothrix thermoacetophila (strain

Query: 2 TLPEFFPVC 10
++PE P+C
Sbjct: 98 SIPEGMPIC 106


>sp|URE1_SULTO|UREASE subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PEFFPV 9
P FFPV
Sbjct: 432 PRFFPV 437


>sp|LYSK_PYRHO|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus horikoshii

Query: 1 DTLPEFFPV 9
DT+P + PV
Sbjct: 68 DTVPGYIPV 76


>sp|LYSK_PYRAB|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus abyssi

Query: 1 DTLPEFFPV 9
DT+P + PV
Sbjct: 69 DTVPGYIPV 77


>sp|LYSK_PYRFU|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus furiosus

Query: 1 DTLPEFFPV 9
DT+P + PV
Sbjct: 68 DTVPGYIPV 76


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TLPEFFPVC 10
T PE P C
Sbjct: 208 TRPELIPAC 216


>sp|PRIL_METAC|DNA primase large subunit PriL|Methanosarcina acetivorans (strain ATCC

Query: 4 PEFFPVC 10
PE FP C
Sbjct: 224 PELFPPC 230


>sp|SEPS_METHJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 LPEFFPV 9
P+FFP+
Sbjct: 342 FPQFFPI 348


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 TLPEFFPVC 10
T PE P C
Sbjct: 212 TRPELLPAC 220


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TLPEFFPVC 10
T PE P C
Sbjct: 211 TRPELMPAC 219


>sp|RL2_NATPD|LARGE ribosomal subunit protein uL2|Natronomonas pharaonis (strain ATCC

Query: 3 LPEFFPVC 10
+PE PVC
Sbjct: 100 IPEGVPVC 107


>sp|RL2_HALWD|LARGE ribosomal subunit protein uL2|Haloquadratum walsbyi (strain DSM

Query: 3 LPEFFPVC 10
+PE PVC
Sbjct: 100 IPEGVPVC 107


>sp|RL2_HALSA|LARGE ribosomal subunit protein uL2|Halobacterium salinarum (strain ATCC

Query: 3 LPEFFPVC 10
+PE PVC
Sbjct: 100 IPEGVPVC 107


>sp|RL2_HALS3|LARGE ribosomal subunit protein uL2|Halobacterium salinarum (strain ATCC

Query: 3 LPEFFPVC 10
+PE PVC
Sbjct: 100 IPEGVPVC 107


>sp|RL2_HALMA|LARGE ribosomal subunit protein uL2|Haloarcula marismortui (strain ATCC

Query: 3 LPEFFPVC 10
+PE PVC
Sbjct: 100 IPEGVPVC 107


>sp|RL2_HALLT|LARGE ribosomal subunit protein uL2|Halorubrum lacusprofundi (strain ATCC

Query: 3 LPEFFPVC 10
+PE PVC
Sbjct: 100 IPEGVPVC 107


>sp|FUCA_META3|L-FUCULOSE phosphate aldolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DTLPEFFPVC 10
D L EF +C
Sbjct: 2 DNLKEFIKIC 11


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 TLPEFFPVC 10
T PE P C
Sbjct: 211 TRPELMPAC 219


>sp|SEPS_METMJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 TLPEFFP 8
T P+FFP
Sbjct: 341 THPQFFP 347


>sp|SYH_METLZ|HISTIDINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 TLPEFFPV 9
TLPE F V
Sbjct: 214 TLPEIFAV 221


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 TLPEFFPVC 10
T PE P C
Sbjct: 211 TRPELMPAC 219


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 TLPEFFPVC 10
T PE P C
Sbjct: 211 TRPELMPAC 219


>sp|RL2_METBU|LARGE ribosomal subunit protein uL2|Methanococcoides burtonii (strain DSM

Query: 3 LPEFFPVC 10
+PE P+C
Sbjct: 100 IPEGIPIC 107


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 TLPEFFPVC 10
T PE P C
Sbjct: 214 TRPELLPAC 222


>sp|Y3544_METJA|UNCHARACTERIZED protein MJECL44|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DTLPEFFPVC 10
+T EF+ +C
Sbjct: 230 NTFEEFYEIC 239


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 TLPEFFPVC 10
T PE P C
Sbjct: 231 TRPELLPAC 239


>sp|SUI1_METVA|PROTEIN translation factor SUI1 homolog|Methanococcus vannielii

Query: 3 LPEFFPVC 10
+PE P+C
Sbjct: 1 MPEICPIC 8


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 TLPEFFPVC 10
T PE P C
Sbjct: 249 TRPELLPAC 257


>sp|SUI1_METMP|PROTEIN translation factor SUI1 homolog|Methanococcus maripaludis (strain

Query: 3 LPEFFPVC 10
+PE P+C
Sbjct: 1 MPEICPIC 8


>sp|SUI1_METM7|PROTEIN translation factor SUI1 homolog|Methanococcus maripaludis (strain

Query: 3 LPEFFPVC 10
+PE P+C
Sbjct: 1 MPEICPIC 8


>sp|SUI1_METM6|PROTEIN translation factor SUI1 homolog|Methanococcus maripaludis (strain

Query: 3 LPEFFPVC 10
+PE P+C
Sbjct: 1 MPEICPIC 8


>sp|SUI1_METM5|PROTEIN translation factor SUI1 homolog|Methanococcus maripaludis (strain

Query: 3 LPEFFPVC 10
+PE P+C
Sbjct: 1 MPEICPIC 8


>sp|PRIL_HALSA|DNA primase large subunit PriL|Halobacterium salinarum (strain ATCC

Query: 3 LPEFFPVC 10
+PE FP C
Sbjct: 230 VPELFPPC 237


>sp|PRIL_HALS3|DNA primase large subunit PriL|Halobacterium salinarum (strain ATCC

Query: 3 LPEFFPVC 10
+PE FP C
Sbjct: 230 VPELFPPC 237


>sp|PRIL_HALMA|DNA primase large subunit PriL|Haloarcula marismortui (strain ATCC

Query: 3 LPEFFPVC 10
+PE FP C
Sbjct: 227 VPELFPPC 234


>sp|MVHB_METFE|POLYFERREDOXIN protein MvhB|Methanothermus fervidus

Query: 2 TLPEFFPVC 10
+LPE P C
Sbjct: 240 SLPEICPAC 248




548|Sequence|2736|2745|FFPVCFSSDS

>sp|METE_THEAC|METHIONINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 VCFSSD 9
VC+SSD
Sbjct: 212 VCYSSD 217




549|Sequence|2741|2750|FSSDSTEVTT

***** No hits found ******


550|Sequence|2746|2755|TEVTTVDLSV

>sp|FRHG_METJA|COENZYME F420 hydrogenase subunit gamma|Methanocaldococcus jannaschii

Query: 1 TEVTTVDLSV 10
TEV VDL++
Sbjct: 116 TEVIKVDLAI 125




551|Sequence|2751|2760|VDLSVHVRRI

>sp|PYRC_SULAC|DIHYDROOROTASE acidocaldarius (strain ATCC 33909

Query: 1 VDLSVHVR 8
VDL VHVR
Sbjct: 48 VDLHVHVR 55


>sp|AMPPA_PYRHO|AMP phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DLSVHVRR 9
DL++HV R
Sbjct: 244 DLTIHVER 251


>sp|PYRC_SULTO|DIHYDROOROTASE tokodaii (strain DSM 16993

Query: 1 VDLSVHVR 8
+D+ VHVR
Sbjct: 48 IDMHVHVR 55


>sp|AMPPA_PYRAB|AMP phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 2 DLSVHVRR 9
DL++HV R
Sbjct: 244 DLTIHVER 251


>sp|PUR7_CALMQ|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 DLSVHVRRI 10
D +HVRR+
Sbjct: 77 DRRIHVRRL 85




552|Sequence|2756|2765|HVRRIGSRMV

>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HVRRIGSR 8
HVR IGSR
Sbjct: 468 HVRFIGSR 475


>sp|NIFH_METMJ|NITROGENASE iron protein|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 RRIGSRMV 10
RRIGSR++
Sbjct: 199 RRIGSRLI 206


>sp|GSA_HALWD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 HVRRIGSRM 9
HV R+G R+
Sbjct: 321 HVNRLGERL 329


>sp|END3_SULAC|ENDONUCLEASE III|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 HVRRIGSRM 9
H+RR+ SR+
Sbjct: 150 HIRRVISRL 158


>sp|GSA_HALSA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 700922

Query: 1 HVRRIGSRM 9
HV R+G R+
Sbjct: 322 HVNRLGGRL 330


>sp|GSA_HALS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 29341

Query: 1 HVRRIGSRM 9
HV R+G R+
Sbjct: 322 HVNRLGGRL 330




553|Sequence|2761|2770|GSRMVLSVFS

>sp|AMZA_ARCFU|ARCHAEMETZINCIN fulgidus (strain ATCC 49558

Query: 1 GSRMVLSVF 9
G+R VLSVF
Sbjct: 89 GARAVLSVF 97




554|Sequence|2766|2775|LSVFSPYWLI

>sp|MRE11_SULTO|DNA double-strand break repair protein|Sulfurisphaera tokodaii (strain

Query: 4 FSPYWLI 10
F+PYW I
Sbjct: 306 FAPYWRI 312


>sp|Y1155_METJA|UPF0313 protein MJ1155|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 PYWLI 10
PYWLI
Sbjct: 480 PYWLI 484


>sp|GGGPS_METTH|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 LSVFSPYWLI 10
L+ +PYW+I
Sbjct: 96 LNSTNPYWII 105


>sp|GGGPS_KORCO|GERANYLGERANYLGLYCERYL phosphate synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LSVFSPYWLI 10
L+ +PYW+I
Sbjct: 94 LNSTNPYWII 103


>sp|SFSA_PYRNV|SUGAR fermentation stimulation protein homolog|Pyrobaculum neutrophilum

Query: 2 SVFSPYW 8
+VFSP W
Sbjct: 183 AVFSPNW 189


>sp|GGGPS_METTM|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter marburgensis (strain ATCC

Query: 5 SPYWLI 10
+PYW+I
Sbjct: 100 NPYWII 105


>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 6 PYWLI 10
PYW+I
Sbjct: 228 PYWII 232


>sp|SYG_ARCFU|GLYCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LSVFSPY 7
LSVF PY
Sbjct: 335 LSVFVPY 341


>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 PYWLI 10
PYW+I
Sbjct: 222 PYWVI 226


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VFSPYWLI 10
V PYW+I
Sbjct: 219 VPQPYWVI 226


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 6 PYWLI 10
PYW+I
Sbjct: 222 PYWVI 226


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 6 PYWLI 10
PYW+I
Sbjct: 222 PYWVI 226


>sp|HMEE_ARCFU|HDR-LIKE menaquinol oxidoreductase cytochrome c|Archaeoglobus fulgidus

Query: 1 LSVFSPYW 8
+ F+PYW
Sbjct: 16 IGFFTPYW 23


>sp|COBS_PYRFU|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LSVFSPYWLI 10
LS+ S YW+I
Sbjct: 52 LSILSLYWVI 61


>sp|GGGPS_HYPBU|GERANYLGERANYLGLYCERYL phosphate synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 LSVFSPYWLI 10
++ PYW++
Sbjct: 99 MNSMDPYWIV 108


>sp|CYAS_METHJ|CYSTEATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 VFSPYW 8
VFS YW
Sbjct: 87 VFSGYW 92


>sp|TOP1_AERPE|DNA topoisomerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 6 PYWLI 10
PYW++
Sbjct: 31 PYWIV 35


>sp|SFSA_PYRIL|SUGAR fermentation stimulation protein homolog|Pyrobaculum islandicum

Query: 3 VFSPYW 8
VFSP W
Sbjct: 181 VFSPNW 186




555|Sequence|2771|2780|PYWLINKTTR

>sp|RS13_METTH|SMALL ribosomal subunit protein uS13|Methanothermobacter

Query: 1 PYWLINK 7
P W+IN+
Sbjct: 76 PSWMINR 82


>sp|RS13_ARCFU|SMALL ribosomal subunit protein uS13|Archaeoglobus fulgidus (strain

Query: 1 PYWLINK 7
P WL+N+
Sbjct: 73 PSWLLNR 79


>sp|ATRMA_PYRHO|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 2 YWLINKT 8
YW +N+T
Sbjct: 211 YWSVNRT 217


>sp|TRUA_THEGJ|TRNA pseudouridine synthase A|Thermococcus gammatolerans (strain DSM

Query: 2 YWLINKTTR 10
+W I+KT R
Sbjct: 104 FWAISKTYR 112


>sp|AROE_CALMQ|SHIKIMATE dehydrogenase (NADP(+))|Caldivirga maquilingensis (strain ATCC

Query: 2 YWLIN 6
YWL+N
Sbjct: 192 YWLLN 196


>sp|SYT_NANEQ|THREONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 YWLIN 6
YW+IN
Sbjct: 438 YWIIN 442


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 WLINKTTR 10
W++NKT +
Sbjct: 805 WIVNKTIK 812




556|Sequence|2776|2785|NKTTRVLQYR

>sp|Y655_ARCFU|METALLOPROTEASE AF_0655|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 RVLQYR 10
RVLQYR
Sbjct: 124 RVLQYR 129


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 NKTTRVLQYR 10
N TTR YR
Sbjct: 1605 NATTRAYNYR 1614


>sp|COBQ_THEAC|PROBABLE cobyric acid synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KTTRVLQYR 10
KTTR ++YR
Sbjct: 356 KTTRSVRYR 364


>sp|SOR_ACIAM|SULFUR oxygenase/reductase|Acidianus ambivalens (Desulfurolobus

Query: 1 NKTTRVLQY 9
+ T RVLQY
Sbjct: 69 SSTVRVLQY 77


>sp|RS4E_METST|SMALL ribosomal subunit protein eS4|Methanosphaera stadtmanae (strain

Query: 1 NKTTRVLQ 8
NKT RVLQ
Sbjct: 97 NKTFRVLQ 104


>sp|SYT_METAR|THREONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 KTTRVLQY 9
KTTRV+ Y
Sbjct: 71 KTTRVMLY 78




557|Sequence|2781|2790|VLQYRSEDIH

>sp|MFNA_METLZ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanocorpusculum labreanum

Query: 4 YRSEDIH 10
YR+ED+H
Sbjct: 18 YRAEDLH 24


>sp|Y1471_METJA|UNCHARACTERIZED protein MJ1471|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LQYRSEDIH 10
L+YR+ DIH
Sbjct: 149 LKYRNYDIH 157


>sp|RL30_METST|LARGE ribosomal subunit protein uL30|Methanosphaera stadtmanae (strain

Query: 2 LQYRSEDIH 10
L YRSE+I+
Sbjct: 137 LGYRSEEIN 145




558|Sequence|2786|2795|SEDIHVKHPA

>sp|Y1062_PYRAB|UNCHARACTERIZED protein PYRAB10620|Pyrococcus abyssi (strain GE5 /

Query: 3 DIHVKH 8
D+HVKH
Sbjct: 149 DVHVKH 154


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 EDIHVKHPA 10
ED+H+ +PA
Sbjct: 483 EDVHLDYPA 491


>sp|Y860_PYRFU|UNCHARACTERIZED protein PF0860|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DIHVKH 8
D+HVKH
Sbjct: 152 DVHVKH 157


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 EDIHVKHPA 10
ED+ KHPA
Sbjct: 277 EDLRRKHPA 285


>sp|Y1209_PYRHO|UNCHARACTERIZED protein PH1209|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DIHVKH 8
D+HVKH
Sbjct: 149 DVHVKH 154


>sp|SUCC2_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit beta|Archaeoglobus fulgidus (strain

Query: 2 EDIHVKHP 9
E+I VKHP
Sbjct: 126 EEIAVKHP 133


>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 2 EDIHVK 7
EDIHVK
Sbjct: 46 EDIHVK 51


>sp|AROA_METHJ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 2 EDIHVKHPA 10
ED+ V HPA
Sbjct: 364 EDVIVIHPA 372


>sp|Y2179_THEKO|UNCHARACTERIZED protein TK2179|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 DIHVKH 8
D+HVKH
Sbjct: 149 DVHVKH 154


>sp|DMSA_HALSA|PUTATIVE dimethyl sulfoxide reductase catalytic|Halobacterium salinarum

Query: 3 DIHVKHPA 10
+IH +HP+
Sbjct: 452 NIHAQHPS 459


>sp|Y1115_METJA|UNCHARACTERIZED protein MJ1115|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DIHVKH 8
D+HVKH
Sbjct: 151 DVHVKH 156


>sp|RS7_PYRHO|SMALL ribosomal subunit protein uS7|Pyrococcus horikoshii (strain ATCC

Query: 1 SEDIHVKHPA 10
+ED+ VK P+
Sbjct: 26 TEDVEVKDPS 35


>sp|AKSA_METTH|HOMOCITRATE synthase AksA|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 SEDIHVKH 8
+ D+H+KH
Sbjct: 113 TSDLHLKH 120


>sp|CCA_METMA|CCA-ADDING enzyme|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SEDIHVKHP 9
+ED H +HP
Sbjct: 105 AEDRHAEHP 113


>sp|CCA_METBF|CCA-ADDING enzyme|Methanosarcina barkeri (strain Fusaro /

Query: 1 SEDIHVKHP 9
+ED H +HP
Sbjct: 105 AEDRHAEHP 113




559|Sequence|2791|2800|VKHPADFRDI

>sp|Y1049_METJA|UNCHARACTERIZED protein MJ1049|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VKHPADFRDI 10
+KHP DF +I
Sbjct: 81 IKHPLDFENI 90


>sp|PHAE_HALMA|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaE|Haloarcula marismortui (strain ATCC 43049

Query: 4 PADFRDI 10
PA+FRDI
Sbjct: 90 PAEFRDI 96


>sp|PHAE_HALHT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaE|Haloarcula hispanica (strain ATCC 33960

Query: 4 PADFRDI 10
PA+FRDI
Sbjct: 90 PAEFRDI 96


>sp|PDXT_PYRNV|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrobaculum neutrophilum

Query: 1 VKHPADFRDI 10
VK P D R+I
Sbjct: 35 VKRPQDLREI 44


>sp|AATB_PYRNV|A-TYPE ATP synthase subunit B|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 PADFRDI 10
P DFRD+
Sbjct: 108 PEDFRDV 114


>sp|AATB_PYRCJ|A-TYPE ATP synthase subunit B|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 PADFRDI 10
P DFRD+
Sbjct: 108 PEDFRDV 114


>sp|AATB_PYRAR|A-TYPE ATP synthase subunit B|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 PADFRDI 10
P DFRD+
Sbjct: 108 PEDFRDV 114


>sp|AATB_PYRAE|A-TYPE ATP synthase subunit B|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PADFRDI 10
P DFRD+
Sbjct: 108 PEDFRDV 114


>sp|AATB_PYRIL|A-TYPE ATP synthase subunit B|Pyrobaculum islandicum (strain DSM 4184

Query: 4 PADFRDI 10
P DFRD+
Sbjct: 108 PEDFRDV 114


>sp|SAT_IGNH4|SULFATE adenylyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 KHPADFRD 9
K P DFRD
Sbjct: 223 KKPGDFRD 230


>sp|AGLJ_HALVD|GLYCOSYLTRANSFERASE AglJ|Haloferax volcanii (strain ATCC 29605

Query: 3 HPADFRDI 10
H DFRDI
Sbjct: 142 HGQDFRDI 149


>sp|TDXH2_PICTO|PEROXIREDOXIN 2|Picrophilus torridus (strain ATCC 700027

Query: 3 HPADFRDI 10
HPADF I
Sbjct: 36 HPADFTPI 43


>sp|HDRE_METBF|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina barkeri (strain

Query: 4 PADFRD 9
PA+FRD
Sbjct: 144 PAEFRD 149


>sp|Y1861_SACS2|UPF0273 protein SSO1861|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VKHPADFRD 9
V+HP D D
Sbjct: 219 VRHPMDITD 227


>sp|PDXT_SACI7|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 1 VKHPADFRDI 10
VK P D +DI
Sbjct: 35 VKIPKDLKDI 44


>sp|PDXT_SACI6|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 1 VKHPADFRDI 10
VK P D +DI
Sbjct: 35 VKIPKDLKDI 44


>sp|PDXT_SACI4|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 1 VKHPADFRDI 10
VK P D +DI
Sbjct: 35 VKIPKDLKDI 44


>sp|PDXT_SACI3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 1 VKHPADFRDI 10
VK P D +DI
Sbjct: 35 VKIPKDLKDI 44


>sp|PDXT_SACI2|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 1 VKHPADFRDI 10
VK P D +DI
Sbjct: 35 VKIPKDLKDI 44


>sp|PDXT_SACI1|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 1 VKHPADFRDI 10
VK P D +DI
Sbjct: 35 VKIPKDLKDI 44


>sp|SYC_HALMA|CYSTEINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 KHPADF 7
+HPADF
Sbjct: 175 RHPADF 180


>sp|Y1830_SULTO|UPF0273 protein STK_18300|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VKHPADFRD 9
V+HP D D
Sbjct: 222 VRHPMDITD 230


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 HPADFRDI 10
HP D RDI
Sbjct: 155 HPHDRRDI 162


>sp|PDXT_SULTO|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Sulfurisphaera tokodaii

Query: 1 VKHPADFRDI 10
VK P D +D+
Sbjct: 35 VKKPNDLKDV 44


>sp|PDXT_PYRAE|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrobaculum aerophilum (strain

Query: 2 KHPADFRDI 10
K P D +DI
Sbjct: 36 KKPGDLKDI 44


>sp|Y1689_METTH|UPF0111 protein MTH_1689|Methanothermobacter thermautotrophicus (strain

Query: 1 VKHPADFRD 9
V PA+FRD
Sbjct: 107 VAFPAEFRD 115


>sp|Y1657_METJA|UNCHARACTERIZED protease MJ1657|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VKHPADFRDI 10
+ HP DF +
Sbjct: 4 ISHPGDFESL 13


>sp|Y2387_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 VKHPADF 7
+K PADF
Sbjct: 223 IKSPADF 229


>sp|SYC_HALSA|CYSTEINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 KHPADF 7
+HPADF
Sbjct: 178 RHPADF 183


>sp|CDPAS_PYRIL|CDP-ARCHAEOL synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VKHPADF 7
++HP DF
Sbjct: 28 IRHPIDF 34


>sp|TDXH_PYRFU|PEROXIREDOXIN furiosus (strain ATCC 43587

Query: 3 HPADF 7
HPADF
Sbjct: 38 HPADF 42


>sp|TDXH_METMA|PEROXIREDOXIN mazei (strain ATCC BAA-159

Query: 3 HPADF 7
HPADF
Sbjct: 36 HPADF 40


>sp|TDXH_METJA|PEROXIREDOXIN jannaschii (strain ATCC 43067

Query: 3 HPADF 7
HPADF
Sbjct: 38 HPADF 42


>sp|Y500_PYRAB|UPF0173 metal-dependent hydrolase PYRAB05000|Pyrococcus abyssi (strain

Query: 1 VKHPADFRDI 10
V P DF+D+
Sbjct: 33 VAKPEDFKDV 42


>sp|TRPE1_HALMA|ANTHRANILATE synthase component 1 1|Haloarcula marismortui (strain ATCC 43049

Query: 4 PADFRDI 10
PADFR++
Sbjct: 67 PADFREV 73


>sp|T2MW_METWO|TYPE II restriction enzyme MwoI|Methanothermobacter wolfeii

Query: 1 VKHPADFRD 9
+++P+DF+D
Sbjct: 116 LENPSDFKD 124


>sp|SAT_HYPBU|SULFATE adenylyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 KHPADFRD 9
K P D+RD
Sbjct: 223 KKPGDYRD 230


>sp|YPZ2_METTF|UNCHARACTERIZED protein ORF2'|Methanothermobacter thermautotrophicus

Query: 1 VKHPADF 7
V HPA+F
Sbjct: 27 VSHPAEF 33


>sp|SAT_STAMF|SULFATE adenylyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 2 KHPADFRD 9
K P D+RD
Sbjct: 223 KKPGDYRD 230


>sp|TDXH2_SULME|PEROXIREDOXIN 2|Sulfuracidifex metallicus (Sulfolobus metallicus)

Query: 3 HPADFRDI 10
HPADF +
Sbjct: 37 HPADFTPV 44


>sp|TDXH_STAMF|PEROXIREDOXIN marinus (strain ATCC 43588

Query: 3 HPADFRDI 10
HPADF +
Sbjct: 40 HPADFTPV 47


>sp|TDXH_PYRHO|PEROXIREDOXIN horikoshii (strain ATCC 700860

Query: 3 HPADF 7
HPADF
Sbjct: 38 HPADF 42


>sp|TDXH_PYRAB|PEROXIREDOXIN abyssi (strain GE5 /

Query: 3 HPADFRDI 10
HPADF +
Sbjct: 38 HPADFTPV 45


>sp|TDXH_IGNH4|PEROXIREDOXIN hospitalis (strain KIN4/I /

Query: 3 HPADFRDI 10
HPADF +
Sbjct: 40 HPADFTPV 47


>sp|TDXH1_SULTO|PEROXIREDOXIN 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 HPADFRDI 10
HPADF +
Sbjct: 38 HPADFTPV 45


>sp|TDXH_HYPBU|PEROXIREDOXIN butylicus (strain DSM 5456

Query: 3 HPADFRDI 10
HPADF +
Sbjct: 40 HPADFTPV 47


>sp|TDXH1_SULME|PEROXIREDOXIN 1|Sulfuracidifex metallicus (Sulfolobus metallicus)

Query: 3 HPADF 7
HPADF
Sbjct: 37 HPADF 41


>sp|TDXH_THEKO|PEROXIREDOXIN kodakarensis (strain ATCC BAA-918

Query: 3 HPADF 7
HPADF
Sbjct: 38 HPADF 42


>sp|TDXH_METTH|PEROXIREDOXIN thermautotrophicus (strain ATCC 29096

Query: 2 KHPADFRDI 10
HPADF +
Sbjct: 35 SHPADFTPV 43


>sp|TDXH_ARCFU|PEROXIREDOXIN fulgidus (strain ATCC 49558

Query: 3 HPADFRDI 10
HPADF +
Sbjct: 37 HPADFTPV 44


>sp|TDXH_METTM|PEROXIREDOXIN marburgensis (strain ATCC BAA-927

Query: 2 KHPADFRDI 10
HPADF +
Sbjct: 35 SHPADFTPV 43


>sp|YPV2_METTF|UNCHARACTERIZED protein ORF2|Methanothermobacter thermautotrophicus

Query: 1 VKHPADF 7
V HPA+F
Sbjct: 27 VSHPAEF 33


>sp|TDXH_NANEQ|PEROXIREDOXIN equitans (strain Kin4-M)

Query: 3 HPADFRDI 10
HPADF +
Sbjct: 36 HPADFTPV 43


>sp|TRUD_HALMA|PROBABLE tRNA pseudouridine synthase D|Haloarcula marismortui (strain ATCC

Query: 4 PADFRD 9
PADFR+
Sbjct: 279 PADFRE 284


>sp|TDXH_AERPE|PEROXIREDOXIN pernix (strain ATCC 700893

Query: 2 KHPADF 7
HPADF
Sbjct: 41 SHPADF 46


>sp|CAS3_METJA|PUTATIVE CRISPR-associated nuclease/helicase Cas3|Methanocaldococcus

Query: 2 KHPADFRDI 10
+ P D+RDI
Sbjct: 583 EKPLDYRDI 591




560|Sequence|2796|2805|DFRDIILFSF

>sp|VORA_METTM|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter marburgensis

Query: 2 FRDIILFSF 10
FRD I F+F
Sbjct: 441 FRDAIRFTF 449


>sp|TRMY_METM5|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 1 DFRDIIL 7
+FRDIIL
Sbjct: 112 EFRDIIL 118


>sp|TRMY_METMP|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 1 DFRDIIL 7
+FRDIIL
Sbjct: 112 EFRDIIL 118


>sp|TRMY_METM7|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 1 DFRDIIL 7
+FRDIIL
Sbjct: 112 EFRDIIL 118




561|Sequence|2801|2810|ILFSFKKKNI

>sp|RFCL_THEAC|REPLICATION factor C large subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LFSFKKKN 9
+F F+KKN
Sbjct: 146 IFEFRKKN 153


>sp|GPGS_METBU|GLUCOSYL-3-PHOSPHOGLYCERATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 ILFSFKKKNI 10
I+F KKK I
Sbjct: 105 IIFDMKKKGI 114


>sp|Y1110_METJA|UNCHARACTERIZED protein MJ1110|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FSFKKKNI 10
F+FKKK+I
Sbjct: 431 FNFKKKDI 438




562|Sequence|2806|2815|KKKNIFTKNK

>sp|ADEC_METBF|ADENINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 3 KNIFTKNK 10
KN+F +NK
Sbjct: 338 KNVFNRNK 345


>sp|ADEC_METAC|ADENINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 KNIFTKNK 10
KN+F +NK
Sbjct: 338 KNVFNRNK 345


>sp|ADEC_METMA|ADENINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 KNIFTKNK 10
KN+F +NK
Sbjct: 338 KNVFNRNK 345


>sp|Y3523_METJA|UNCHARACTERIZED protein MJECL23|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KKKNIFTKNK 10
K KN+F+KN+
Sbjct: 36 KFKNVFSKNR 45


>sp|ARGJ_METAC|GLUTAMATE N-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 IFTKNK 10
+FTKNK
Sbjct: 38 VFTKNK 43




563|Sequence|2811|2820|FTKNKVQLKI

>sp|RTCA_PYRAB|RNA 3'-terminal phosphate cyclase|Pyrococcus abyssi (strain GE5 /

Query: 1 FTKNKVQLKI 10
F KN+V+ KI
Sbjct: 108 FAKNRVEFKI 117


>sp|ARGJ_METAC|GLUTAMATE N-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FTKNKV 6
FTKNKV
Sbjct: 39 FTKNKV 44


>sp|RAD50_SULAC|DNA double-strand break repair Rad50|Sulfolobus acidocaldarius (strain

Query: 2 TKNKVQLKI 10
T+NK+QL++
Sbjct: 487 TRNKLQLEL 495




564|Sequence|2816|2825|VQLKISTSAW

>sp|SMC_THEAC|CHROMOSOME partition protein Smc|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VQLKISTSAW 10
+ LKI TS W
Sbjct: 427 LDLKIRTSEW 436


>sp|COFH_METAR|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocella arvoryzae (strain DSM

Query: 4 KISTSAW 10
K+STS W
Sbjct: 181 KLSTSEW 187




565|Sequence|2821|2830|STSAWSSSFS

>sp|SYP_METS5|PROLINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 STSAWSSSFS 10
S WSS+FS
Sbjct: 4 SREKWSSNFS 13


>sp|Y878_METJA|UNCHARACTERIZED lipoprotein MJ0878|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 STSAWSSSF 9
S++AW S+F
Sbjct: 333 SSTAWLSTF 341




566|Sequence|2826|2835|SSSFSLDTVG

>sp|SPEE_SULAC|POLYAMINE aminopropyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SSSFSLDT 8
S SFSLDT
Sbjct: 196 SPSFSLDT 203




567|Sequence|2831|2840|LDTVGSYGCV

>sp|HMDH_HALVD|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Haloferax volcanii (strain ATCC 29605

Query: 1 LDTVGSYG 8
LD VG+YG
Sbjct: 46 LDAVGNYG 53


>sp|DAPA_METLZ|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 TVGSYGCV 10
+VG +GC+
Sbjct: 203 SVGGHGCI 210


>sp|HIS6_METTH|IMIDAZOLE glycerol phosphate synthase subunit|Methanothermobacter

Query: 2 DTVGSYGCV 10
D VGS CV
Sbjct: 122 DLVGSQACV 130


>sp|SPSS2_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocella arvoryzae (strain DSM 22066

Query: 1 LDTVGSYGCV 10
+DT GSY V
Sbjct: 392 VDTTGSYNKV 401




568|Sequence|2836|2845|SYGCVKCPAN

>sp|NADA_SULTO|QUINOLINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SYGCVKCP 8
+Y C +CP
Sbjct: 257 AYACARCP 264


>sp|Y066_METJA|UNCHARACTERIZED protein MJ0066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GCVKCPA 9
GC CPA
Sbjct: 424 GCFMCPA 430


>sp|ACDB1_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 2 YGCVKC 7
YGCV C
Sbjct: 478 YGCVMC 483


>sp|Y973_METJA|UNCHARACTERIZED protein MJ0973|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GCVKCPA 9
GC CPA
Sbjct: 344 GCYMCPA 350


>sp|ACDB2_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 2 YGCVKC 7
YGCV C
Sbjct: 185 YGCVMC 190


>sp|RIFK_CENSY|RIBOFLAVIN kinase|Cenarchaeum symbiosum (strain A)

Query: 1 SYGCVKCPA 9
SYG VKC A
Sbjct: 131 SYGWVKCFA 139


>sp|IF2G_METAC|TRANSLATION initiation factor 2 subunit|Methanosarcina acetivorans (strain

Query: 4 CVKCPA 9
C KCPA
Sbjct: 90 CPKCPA 95


>sp|T1MH_METJA|TYPE I restriction enzyme MjaIX|Methanocaldococcus jannaschii (strain

Query: 2 YGCVKCP 8
YG V CP
Sbjct: 409 YGIVACP 415


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 YGCVKCPAN 10
Y C++ P N
Sbjct: 272 YNCIEAPPN 280


>sp|GATA_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Archaeoglobus fulgidus (strain ATCC

Query: 3 GCVKCPAN 10
G ++CPA+
Sbjct: 164 GSIRCPAS 171


>sp|Y441_NANEQ|PROTEIN NEQ441|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 SYGCVK 6
SYGC+K
Sbjct: 149 SYGCLK 154


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SYGCVKC 7
SY C KC
Sbjct: 745 SYSCPKC 751


>sp|Y486_METJA|UNCHARACTERIZED protein MJ0486|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GCVKCP 8
GC+ CP
Sbjct: 57 GCIFCP 62


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 3 GCVKCP 8
GC CP
Sbjct: 1725 GCATCP 1730


>sp|Y1620_METJA|UNCHARACTERIZED protein MJ1620|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GCVKCPAN 10
G +KCP N
Sbjct: 204 GTLKCPLN 211


>sp|D89S1_PYRHO|DAMAGE-CONTROL phosphatase PH1575|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YGCVKCPAN 10
Y C+ C AN
Sbjct: 5 YECLTCMAN 13


>sp|GATA_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 3 GCVKCPAN 10
G V+CPA+
Sbjct: 168 GSVRCPAS 175


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 4 CVKCPA 9
CVKC A
Sbjct: 1064 CVKCAA 1069


>sp|Y1312_METJA|UPF0026 protein MJ1312|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SYGCVKC 7
SY CV C
Sbjct: 28 SYDCVYC 34


>sp|RPA_METJA|REPLICATION factor A|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YGCVKCPAN 10
YG ++C AN
Sbjct: 253 YGGLECTAN 261


>sp|Y661_METJA|UNCHARACTERIZED protein MJ0661|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SYGCVKC 7
+Y C+KC
Sbjct: 25 AYHCIKC 31


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain DSM

Query: 1 SYGCVKCPA 9
S CVKC A
Sbjct: 1025 SVRCVKCNA 1033


>sp|PYRI_PICTO|ASPARTATE carbamoyltransferase regulatory chain|Picrophilus torridus (strain

Query: 2 YGCVKC 7
YG VKC
Sbjct: 100 YGIVKC 105


>sp|Y688_PYRIL|UPF0179 protein Pisl_0688|Pyrobaculum islandicum (strain DSM 4184

Query: 3 GCVKCPAN 10
GC CP N
Sbjct: 100 GCKDCPDN 107


>sp|RPO12_HALLT|DNA-DIRECTED RNA polymerase subunit Rpo12|Halorubrum lacusprofundi (strain

Query: 1 SYGCVKCP 8
YG V+CP
Sbjct: 16 EYGGVRCP 23


>sp|RPO12_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo12|Halobacterium salinarum (strain ATCC

Query: 1 SYGCVKCP 8
YG V+CP
Sbjct: 16 EYGGVRCP 23


>sp|RPO12_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo12|Halobacterium salinarum (strain ATCC

Query: 1 SYGCVKCP 8
YG V+CP
Sbjct: 16 EYGGVRCP 23


>sp|RPO12_HALWD|DNA-DIRECTED RNA polymerase subunit Rpo12|Haloquadratum walsbyi (strain DSM

Query: 1 SYGCVKCP 8
YG V+CP
Sbjct: 16 EYGGVRCP 23


>sp|RPO12_HALMA|DNA-DIRECTED RNA polymerase subunit Rpo12|Haloarcula marismortui (strain ATCC

Query: 1 SYGCVKCP 8
YG V+CP
Sbjct: 16 EYGGVRCP 23




569|Sequence|2841|2850|KCPANNMEYL

>sp|EF2_METB6|ELONGATION factor 2|Methanoregula boonei (strain DSM 21154

Query: 1 KCPANNMEYL 10
KC A +M+YL
Sbjct: 229 KCRAGDMKYL 238


>sp|MTAD_PYRHO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 CPANNME 8
CPA+NM+
Sbjct: 267 CPASNMK 273


>sp|MTAD_PYRFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CPANNME 8
CPA+NM+
Sbjct: 265 CPASNMK 271


>sp|MTAD_PYRAB|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus abyssi (strain GE5 /

Query: 2 CPANNME 8
CPA+NM+
Sbjct: 270 CPASNMK 276


>sp|MTAD_NATPD|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 CPANNME 8
CPA+NM+
Sbjct: 268 CPASNMK 274


>sp|MTAD_HALWD|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 CPANNME 8
CPA+NM+
Sbjct: 282 CPASNMK 288


>sp|MTAD_HALSA|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Halobacterium salinarum (strain ATCC 700922

Query: 2 CPANNME 8
CPA+NM+
Sbjct: 269 CPASNMK 275


>sp|MTAD_HALMA|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Haloarcula marismortui (strain ATCC 43049

Query: 2 CPANNME 8
CPA+NM+
Sbjct: 270 CPASNMK 276


>sp|MTAD1_ARCFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CPANNME 8
CPA+NM+
Sbjct: 260 CPASNMK 266


>sp|DHQS_METJA|3-DEHYDROQUINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CPANNMEYL 10
CP N +YL
Sbjct: 255 CPGNKTKYL 263


>sp|DHQS_METVS|3-DEHYDROQUINATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 CPANNMEYL 10
CP N +YL
Sbjct: 255 CPENKTKYL 263


>sp|DHQS_METMP|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 CPANNMEYL 10
CP N +YL
Sbjct: 255 CPENKTKYL 263


>sp|DHQS_METM7|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C7 /

Query: 2 CPANNMEYL 10
CP N +YL
Sbjct: 255 CPENKTKYL 263


>sp|DHQS_METM6|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C6 /

Query: 2 CPANNMEYL 10
CP N +YL
Sbjct: 255 CPENKTKYL 263


>sp|DHQS_METM5|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C5 /

Query: 2 CPANNMEYL 10
CP N +YL
Sbjct: 255 CPENKTKYL 263


>sp|TDXH_METMP|PEROXIREDOXIN maripaludis (strain DSM 14266

Query: 3 PANNME 8
PANNM+
Sbjct: 184 PANNMD 189


>sp|TDXH_METM5|PEROXIREDOXIN maripaludis (strain C5 /

Query: 3 PANNME 8
PANNM+
Sbjct: 184 PANNMD 189


>sp|RRP4_IGNAA|EXOSOME complex component Rrp4|Ignisphaera aggregans (strain DSM 17230

Query: 1 KCPANNMEYL 10
+CP +EY+
Sbjct: 205 RCPNPELEYI 214


>sp|TF2B2_THEAC|TRANSCRIPTION initiation factor IIB 2|Thermoplasma acidophilum (strain ATCC

Query: 1 KCPANNMEYL 10
+CP N E+L
Sbjct: 10 RCPECNSEHL 19


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 KCPANNMEYL 10
K P N++YL
Sbjct: 1086 KLPEKNIDYL 1095


>sp|TRM1_SACI6|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 PANNMEYL 10
P +NME+L
Sbjct: 280 PLHNMEFL 287


>sp|TRM1_SACI4|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 PANNMEYL 10
P +NME+L
Sbjct: 280 PLHNMEFL 287


>sp|TRM1_SACI3|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 PANNMEYL 10
P +NME+L
Sbjct: 280 PLHNMEFL 287


>sp|TRM1_SACI2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 PANNMEYL 10
P +NME+L
Sbjct: 280 PLHNMEFL 287


>sp|TRM1_SACI7|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 PANNMEYL 10
P +NME+L
Sbjct: 280 PLHNMEFL 287


>sp|TRM1_SACI1|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 PANNMEYL 10
P +NME+L
Sbjct: 280 PLHNMEFL 287




570|Sequence|2846|2855|NMEYLVGVSI

>sp|DNAG_METAR|DNA primase DnaG|Methanocella arvoryzae (strain DSM 22066

Query: 1 NMEYLVGVSI 10
N+E LVGV +
Sbjct: 456 NLETLVGVKM 465


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 EYLVGVS 9
EY++GVS
Sbjct: 1039 EYIIGVS 1045


>sp|PURP_PYRHO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus horikoshii (strain ATCC

Query: 3 EYLVGVSI 10
EY+VGV I
Sbjct: 173 EYVVGVPI 180




571|Sequence|2851|2860|VGVSIKMSSF

***** No hits found ******


572|Sequence|2856|2865|KMSSFNLSRI

>sp|ASST_METJA|L-ASPARTATE semialdehyde sulfurtransferase|Methanocaldococcus jannaschii

Query: 1 KMSSFNLSRI 10
KMS +N+S +
Sbjct: 474 KMSKYNISGV 483




573|Sequence|2861|2870|NLSRIVTLTP

>sp|Y1488_ARCFU|UNCHARACTERIZED protein AF_1488|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NLSRIVTLT 9
+LSRI+T T
Sbjct: 70 DLSRIITAT 78




574|Sequence|2866|2875|VTLTPFCTIA

>sp|DPCKG_ARCFU|GTP-DEPENDENT dephospho-CoA kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 PFCTIA 10
PFCT+
Sbjct: 41 PFCTVG 46




575|Sequence|2871|2880|FCTIANKSSL

>sp|THII_SULAC|PROBABLE tRNA sulfurtransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FCTIANKS 8
+C I+NKS
Sbjct: 330 YCVISNKS 337


>sp|OGT_SULTO|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FCTIANKSSL 10
FC A +SSL
Sbjct: 28 FCDCAERSSL 37


>sp|RS4E_METS3|SMALL ribosomal subunit protein eS4|Methanobrevibacter smithii (strain

Query: 1 FCTIANKSSL 10
C I NKS++
Sbjct: 122 LCKIVNKSTI 131




576|Sequence|2876|2885|NKSSLELEVG

***** No hits found ******


577|Sequence|2881|2890|ELEVGEIASD

>sp|RL2_PYRNV|LARGE ribosomal subunit protein uL2|Pyrobaculum neutrophilum (strain

Query: 1 ELEVGEIAS 9
E+E+GE AS
Sbjct: 78 EIEIGEAAS 86


>sp|RL2_PYRIL|LARGE ribosomal subunit protein uL2|Pyrobaculum islandicum (strain DSM

Query: 1 ELEVGEIAS 9
E+EVG++A+
Sbjct: 79 EIEVGDLAA 87


>sp|GCSPA_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 3 EVGEIASD 10
E+GEIA D
Sbjct: 223 EIGEIAHD 230


>sp|GATE_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanothermobacter thermautotrophicus

Query: 2 LEVGEIASD 10
LEVG+I+ D
Sbjct: 523 LEVGKISKD 531


>sp|PSB_HALUD|PROTEASOME subunit beta|Halorhabdus utahensis (strain DSM 12940

Query: 3 EVGEIASD 10
E+GEIA+D
Sbjct: 21 ELGEIATD 28


>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 ELEVGEIASD 10
ELE+ ++ASD
Sbjct: 102 ELEIKKLASD 111


>sp|AROK_METS3|SHIKIMATE kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LEVGEIAS 9
LEVG IAS
Sbjct: 236 LEVGAIAS 243




578|Sequence|2886|2895|EIASDGSMPT

>sp|RPO3_METS3|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanobrevibacter smithii (strain ATCC

Query: 2 IASDGSMP 9
I +DGSMP
Sbjct: 239 IETDGSMP 246


>sp|RPO3_NATPD|DNA-DIRECTED RNA polymerase subunit Rpo3|Natronomonas pharaonis (strain ATCC

Query: 1 EIASDGSMPT 10
++ +DGSMP
Sbjct: 214 DVETDGSMPV 223


>sp|AGLQ_HALVD|ARCHAEAL glycosylation protein Q|Haloferax volcanii (strain ATCC 29605

Query: 4 SDGSMP 9
SDGSMP
Sbjct: 21 SDGSMP 26


>sp|TRM1_PYRIL|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum islandicum

Query: 1 EIASDGSMPT 10
E A DG PT
Sbjct: 303 EFAVDGKSPT 312


>sp|RPO3_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo3|Halobacterium salinarum (strain ATCC

Query: 2 IASDGSMP 9
+ SDGSMP
Sbjct: 216 VESDGSMP 223


>sp|RPO3_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo3|Halobacterium salinarum (strain ATCC

Query: 2 IASDGSMP 9
+ SDGSMP
Sbjct: 216 VESDGSMP 223


>sp|TRM1_PYRCJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum calidifontis

Query: 1 EIASDGSMPT 10
E A DG PT
Sbjct: 307 EFAVDGKSPT 316


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 1 EIASDGSMPT 10
E A+DG+ PT
Sbjct: 109 ERAADGAAPT 118


>sp|AATB_METKA|A-TYPE ATP synthase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 IASDGSMPT 10
IASDGS+ T
Sbjct: 495 IASDGSVDT 503




579|Sequence|2891|2900|GSMPTNKWNY

>sp|Y1542_METJA|UNCHARACTERIZED protein MJ1542|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SMPTNKW 8
SMP+ KW
Sbjct: 406 SMPSEKW 412


>sp|COFH_METPE|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanosphaerula palustris (strain ATCC

Query: 1 GSMPTNKW 8
G +PT++W
Sbjct: 195 GKIPTDEW 202


>sp|HISX_SULAC|HISTIDINOL dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 MPTNKWN 9
+PTN W+
Sbjct: 335 LPTNAWS 341


>sp|PSB_NATMM|PROTEASOME subunit beta|Natrialba magadii (strain ATCC 43099

Query: 1 GSMPTNKWN 9
GSMP N+++
Sbjct: 29 GSMPKNEFS 37


>sp|RTCA_METKA|RNA 3'-terminal phosphate cyclase|Methanopyrus kandleri (strain AV19 /

Query: 3 MPTNKW 8
+PTN W
Sbjct: 319 LPTNAW 324


>sp|EF1A_PYRHO|ELONGATION factor 1-alpha|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 MPTNKWN 9
+PT+ WN
Sbjct: 178 IPTSAWN 184


>sp|EF1A_PYRAB|ELONGATION factor 1-alpha|Pyrococcus abyssi (strain GE5 /

Query: 3 MPTNKWN 9
+PT+ WN
Sbjct: 178 IPTSAWN 184


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SMPTNKW 8
S P NKW
Sbjct: 127 SNPRNKW 133


>sp|SYR_META3|ARGININE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 TNKWNY 10
TNK+NY
Sbjct: 231 TNKFNY 236




580|Sequence|2896|2905|NKWNYIASSE

>sp|SPEE_AERPE|POLYAMINE aminopropyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 NKWNYIAS 8
+ WNY+AS
Sbjct: 149 DAWNYVAS 156


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 1 NKWNYIAS 8
++W+YI+S
Sbjct: 244 DRWDYISS 251


>sp|EPDB_METMP|MINOR structural pilin EpdB|Methanococcus maripaludis (strain DSM 14266

Query: 1 NKWNYIASS 9
N +NY+ASS
Sbjct: 104 NTYNYLASS 112


>sp|SYH_THEKO|HISTIDINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KWNYIAS 8
KW YIA+
Sbjct: 100 KWYYIAN 106


>sp|SYH_PYRFU|HISTIDINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KWNYIAS 8
KW YIA+
Sbjct: 98 KWYYIAN 104


>sp|SYH_PYRAB|HISTIDINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 KWNYIAS 8
KW YIA+
Sbjct: 98 KWYYIAN 104


>sp|SYH_PYRHO|HISTIDINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KWNYIAS 8
KW YIA+
Sbjct: 98 KWYYIAN 104




581|Sequence|2901|2910|IASSECLPFW

>sp|TRUB_METMP|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain

Query: 3 SSECLPFW 10
+++C+P W
Sbjct: 80 TTKCVPIW 87


>sp|TRUB_METM7|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain

Query: 3 SSECLPFW 10
+++C+P W
Sbjct: 80 TTKCVPIW 87


>sp|TRUB_METM6|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain

Query: 3 SSECLPFW 10
+++C+P W
Sbjct: 80 TTKCVPIW 87


>sp|TRUB_METM5|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain

Query: 3 SSECLPFW 10
+++C+P W
Sbjct: 80 TTKCVPIW 87


>sp|SYS2_METBU|TYPE-2 serine--tRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 SECLPFW 10
++C PFW
Sbjct: 304 AQCPPFW 310


>sp|SYS2_METTH|TYPE-2 serine--tRNA ligase|Methanothermobacter thermautotrophicus (strain

Query: 1 IASSECLPFW 10
IA ++C PF+
Sbjct: 309 IAPAQCEPFY 318


>sp|SYS2_METBF|TYPE-2 serine--tRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 SECLPFW 10
++C PFW
Sbjct: 304 AQCPPFW 310


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 3 SSECLPFW 10
S EC P W
Sbjct: 269 SEECEPVW 276


>sp|PHR_METTM|DEOXYRIBODIPYRIMIDINE photo-lyase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 ASSECLPFW 10
+S CLP W
Sbjct: 299 SSIRCLPEW 307


>sp|PHR_METTH|DEOXYRIBODIPYRIMIDINE photo-lyase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 ASSECLPFW 10
+S CLP W
Sbjct: 299 SSISCLPEW 307




582|Sequence|2906|2915|CLPFWPESLS

>sp|UPPS_METMA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanosarcina mazei

Query: 1 CLPFWPE 7
C PFWPE
Sbjct: 233 CAPFWPE 239


>sp|UPPS_METAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanosarcina

Query: 1 CLPFWPE 7
C PFWPE
Sbjct: 233 CAPFWPE 239


>sp|UPPS_HALSA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Halobacterium

Query: 1 CLPFWPE 7
C P+WPE
Sbjct: 228 CTPYWPE 234


>sp|UPPS_HALMA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Haloarcula

Query: 1 CLPFWPE 7
C P+WPE
Sbjct: 228 CTPYWPE 234


>sp|AMPA_AERPE|PROBABLE cytosol aminopeptidase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PFWPE 7
P+WPE
Sbjct: 464 PYWPE 468


>sp|GPDA_ARCFU|NADP(+)-DEPENDENT glycerol-3-phosphate dehydrogenase|Archaeoglobus fulgidus (strain

Query: 4 FWPESL 9
FWPE L
Sbjct: 60 FWPEQL 65


>sp|MTBA_METBA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina barkeri

Query: 1 CLPFWPESLS 10
C +WPE+ S
Sbjct: 39 CGAYWPEAHS 48


>sp|RL22_SULTO|LARGE ribosomal subunit protein uL22|Sulfurisphaera tokodaii (strain

Query: 2 LPFWPES 8
LPFW S
Sbjct: 60 LPFWKHS 66


>sp|TIAS_CENSY|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Cenarchaeum symbiosum (strain

Query: 3 PFWPESL 9
P WPE +
Sbjct: 182 PIWPEDV 188


>sp|G3P2_METBF|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 LPFWPESLS 10
L WPES++
Sbjct: 278 LCIWPESIT 286


>sp|MTBA_METMA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 FWPES 8
FWPE+
Sbjct: 42 FWPEA 46


>sp|G3P_METMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 WPESLS 10
WPES++
Sbjct: 281 WPESIT 286


>sp|G3P1_METBF|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina barkeri (strain Fusaro /

Query: 5 WPESLS 10
WPES++
Sbjct: 281 WPESIT 286


>sp|G3P1_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 WPESLS 10
WPES++
Sbjct: 281 WPESIT 286


>sp|MOBA_PYRFU|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus furiosus (strain

Query: 1 CLPFWP 6
C+P WP
Sbjct: 117 CVPRWP 122


>sp|G3P_METTH|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 LPFWPESLS 10
+P W ES++
Sbjct: 279 IPVWEESIN 287


>sp|SYS2_METBU|TYPE-2 serine--tRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 CLPFW 5
C PFW
Sbjct: 306 CPPFW 310


>sp|SYS2_METBF|TYPE-2 serine--tRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 CLPFW 5
C PFW
Sbjct: 306 CPPFW 310




583|Sequence|2911|2920|PESLSGKLCV

>sp|SYM_ARCFU|METHIONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PESLSGKLCV 10
PE L GKL V
Sbjct: 605 PEELEGKLVV 614


>sp|Y912_METMA|UPF0288 protein MM_0912|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PESLSGKL 8
PES SGKL
Sbjct: 75 PESTSGKL 82


>sp|Y3997_METAC|UPF0288 protein MA_3997|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PESLSGKL 8
PES SGKL
Sbjct: 75 PESSSGKL 82


>sp|HMDH_PYRHO|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 SLSGKLCV 10
+LSG LCV
Sbjct: 228 ALSGNLCV 235


>sp|HMDH_PYRAB|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus abyssi (strain GE5 /

Query: 3 SLSGKLCV 10
+LSG LCV
Sbjct: 223 ALSGNLCV 230


>sp|THI4_METJA|THIAMINE thiazole synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LSGKLC 9
LSGKLC
Sbjct: 250 LSGKLC 255


>sp|Y706_METBF|UPF0288 protein Mbar_A0706|Methanosarcina barkeri (strain Fusaro /

Query: 1 PESLSGKL 8
PES SGKL
Sbjct: 75 PESPSGKL 82


>sp|FAU1_PYRIL|PROBABLE ribonuclease FAU-1|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PESLSGKLC 9
PE+ GK+C
Sbjct: 425 PEAPGGKIC 433


>sp|Y1155_METJA|UPF0313 protein MJ1155|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PESLSGKLC 9
PE +S K+C
Sbjct: 439 PEHISKKVC 447


>sp|OTC_SACS2|ORNITHINE carbamoyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 PESLSGK 7
P SLSGK
Sbjct: 38 PNSLSGK 44


>sp|FAU1_PYRNV|PROBABLE ribonuclease FAU-1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PESLSGKLC 9
PE+ GK+C
Sbjct: 424 PEAPGGKIC 432


>sp|PSA_METS3|PROTEASOME subunit alpha|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 ESLSGKLC 9
+SLS KLC
Sbjct: 111 DSLSKKLC 118


>sp|CDAT8_METKA|TRNA(CYTOSINE(8)) deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 PESLSGKL 8
PE+LSG++
Sbjct: 158 PENLSGRV 165


>sp|AATA_THEAC|A-TYPE ATP synthase subunit A|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PESLSGKL 8
PE +SGK+
Sbjct: 149 PEGISGKV 156


>sp|KORB_METTM|2-OXOGLUTARATE synthase subunit KorB|Methanothermobacter marburgensis (strain ATCC

Query: 1 PESLSGKLCV 10
PE + GKL +
Sbjct: 240 PEEVEGKLII 249




584|Sequence|2916|2925|GKLCVRVVGC

>sp|CARA_PYRAE|CARBAMOYL phosphate synthase small chain|Pyrobaculum aerophilum (strain ATCC

Query: 1 GKLCVRVVGC 10
G+LC+ VV C
Sbjct: 161 GRLCIGVVDC 170


>sp|G3P_PYRNV|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GKLCVRVVGC 10
GK VRVV C
Sbjct: 131 GKRYVRVVSC 140


>sp|G3P_THEVO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GKLCVRVVGC 10
GK VRVV C
Sbjct: 130 GKSYVRVVSC 139


>sp|G3P_PYRAB|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 GKLCVRVVGC 10
GK VRVV C
Sbjct: 132 GKSYVRVVSC 141


>sp|G3P_ARCFU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GKLCVRVVGC 10
GK VRVV C
Sbjct: 133 GKSYVRVVSC 142


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain ATCC

Query: 2 KLCVRVVGC 10
K+C+ GC
Sbjct: 598 KICINAYGC 606


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 2 KLCVRVVGC 10
K+C+ GC
Sbjct: 598 KICINAYGC 606


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 2 KLCVRVVGC 10
K+C+ GC
Sbjct: 598 KICINAYGC 606


>sp|G3P_PYRHO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GKLCVRVVGC 10
GK VRVV C
Sbjct: 132 GKNYVRVVSC 141


>sp|G3P_PYRCJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GKLCVRVVGC 10
GK +RVV C
Sbjct: 131 GKRYIRVVSC 140


>sp|G3P_METBU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GKLCVRVVGC 10
GK VRVV C
Sbjct: 132 GKDFVRVVSC 141


>sp|G3P_THESM|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus sibiricus (strain DSM 12597

Query: 1 GKLCVRVVGC 10
GK VRVV C
Sbjct: 132 GKDYVRVVSC 141


>sp|G3P_THEON|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 1 GKLCVRVVGC 10
GK VRVV C
Sbjct: 132 GKDYVRVVSC 141


>sp|G3P_THEKO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GKLCVRVVGC 10
GK VRVV C
Sbjct: 132 GKDYVRVVSC 141


>sp|G3P_PYRWO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus woesei

Query: 1 GKLCVRVVGC 10
GK VRVV C
Sbjct: 132 GKDYVRVVSC 141


>sp|G3P_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GKLCVRVVGC 10
GK VRVV C
Sbjct: 132 GKDYVRVVSC 141


>sp|G3P_METJA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GKLCVRVVGC 10
GK VRVV C
Sbjct: 135 GKDYVRVVSC 144


>sp|SYT_THEPD|THREONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 GKLCVRVVG 9
GKL VRV G
Sbjct: 559 GKLTVRVRG 567


>sp|G3P_SULTO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GKLCVRVVGC 10
GK +RVV C
Sbjct: 132 GKKYIRVVSC 141


>sp|G3P_SACS2|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GKLCVRVVGC 10
GK +RVV C
Sbjct: 130 GKKYIRVVSC 139


>sp|G3P_SACI7|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GKLCVRVVGC 10
GK +RVV C
Sbjct: 130 GKKYIRVVSC 139


>sp|G3P_SACI6|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GKLCVRVVGC 10
GK +RVV C
Sbjct: 130 GKKYIRVVSC 139


>sp|G3P_SACI4|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GKLCVRVVGC 10
GK +RVV C
Sbjct: 130 GKKYIRVVSC 139


>sp|G3P_SACI3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 GKLCVRVVGC 10
GK +RVV C
Sbjct: 130 GKKYIRVVSC 139


>sp|G3P_SACI2|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GKLCVRVVGC 10
GK +RVV C
Sbjct: 130 GKKYIRVVSC 139


>sp|G3P_SACI1|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GKLCVRVVGC 10
GK +RVV C
Sbjct: 130 GKKYIRVVSC 139


>sp|PURO_METTH|IMP cyclohydrolase|Methanothermobacter thermautotrophicus (strain

Query: 4 CVRVVG 9
C+R+VG
Sbjct: 61 CIRIVG 66


>sp|G3P_METHJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GKLCVRVVGC 10
G+ VRVV C
Sbjct: 131 GRQFVRVVSC 140


>sp|TIAS_METV3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanococcus voltae (strain

Query: 1 GKLCVRVVG 9
G +C+++VG
Sbjct: 54 GGVCLKIVG 62


>sp|G3P_PYRIL|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GKLCVRVVGC 10
G+ VRVV C
Sbjct: 131 GRRYVRVVSC 140


>sp|G3P_PYRAR|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GKLCVRVVGC 10
G+ VRVV C
Sbjct: 131 GRRYVRVVSC 140


>sp|G3P_PYRAE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GKLCVRVVGC 10
G+ VRVV C
Sbjct: 131 GRRYVRVVSC 140




585|Sequence|2921|2930|RVVGCEGSSK

>sp|FENR_PICTO|FERREDOXIN--NADP reductase|Picrophilus torridus (strain ATCC 700027

Query: 1 RVVGCEGSSK 10
R +GCEG +
Sbjct: 123 RKIGCEGEDR 132


>sp|RS3A_THEAC|SMALL ribosomal subunit protein eS1|Thermoplasma acidophilum (strain

Query: 1 RVVGCEGS 8
R+ GCEG+
Sbjct: 70 RITGCEGT 77


>sp|AATB_METTH|A-TYPE ATP synthase subunit B|Methanothermobacter thermautotrophicus

Query: 1 RVVGCEGS 8
R+VG EGS
Sbjct: 295 RIVGKEGS 302


>sp|AATA_METKA|A-TYPE ATP synthase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 3 VGCEGS 8
VGCEG+
Sbjct: 20 VGCEGA 25


>sp|Y443_METJA|KH domain-containing protein MJ0443|Methanocaldococcus jannaschii

Query: 1 RVVGCEGSSK 10
RV+G EG S+
Sbjct: 120 RVIGKEGKSR 129


>sp|Y253_METJA|PUTATIVE hydrogenase maturation protease MJ0253|Methanocaldococcus

Query: 2 VVGCEG 7
V+GC+G
Sbjct: 116 VIGCQG 121


>sp|FTSZ2_ARCFU|CELL division protein FtsZ 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VVGCEGS 8
VVGC GS
Sbjct: 34 VVGCGGS 40


>sp|ACD1_ARCFU|ACETATE--COA ligase [ADP-forming] I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RVVGCEG 7
RVVG EG
Sbjct: 470 RVVGAEG 476




586|Sequence|2926|2935|EGSSKPFFYN

>sp|YPZ8_METTF|UNCHARACTERIZED protein ORF8'|Methanothermobacter thermautotrophicus

Query: 3 SSKPFFY 9
+SKP+FY
Sbjct: 354 NSKPYFY 360


>sp|TRM1_NATPD|TRNA (guanine(26)-N(2))-dimethyltransferase|Natronomonas pharaonis

Query: 1 EGSSKPFFYN 10
EGS + FYN
Sbjct: 21 EGSGEGVFYN 30


>sp|Y963_METJA|UNCHARACTERIZED protein MJ0963|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 KPFFYN 10
KP FYN
Sbjct: 107 KPIFYN 112


>sp|Y2102_ARCFU|UNCHARACTERIZED protein AF_2102|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GSSKPFFY 9
G KPF Y
Sbjct: 106 GKRKPFLY 113


>sp|PNCB_METBU|NICOTINATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 4 SKPFFYN 10
SKPFF N
Sbjct: 265 SKPFFQN 271


>sp|HIS8_SACS2|HISTIDINOL-PHOSPHATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EGSSKPFFYN 10
+GS + FYN
Sbjct: 109 DGSIRAIFYN 118




587|Sequence|2931|2940|PFFYNRQDNG

>sp|XDH1_HALVD|D-XYLOSE 1-dehydrogenase [NADP(+)] 1|Haloferax volcanii (strain ATCC 29605

Query: 1 PFFYNRQDNG 10
P FYNRQ G
Sbjct: 286 PAFYNRQKRG 295


>sp|NURA_SACS2|DNA double-strand break repair nuclease|Saccharolobus solfataricus

Query: 3 FYNRQDNG 10
FY R DNG
Sbjct: 259 FYTRLDNG 266


>sp|ENO_META3|ENOLASE aeolicus (strain ATCC BAA-1280

Query: 3 FYNRQDN 9
FYN+ DN
Sbjct: 249 FYNKDDN 255


>sp|GSA_HALLT|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PFFYNRQDNG 10
PFF R D G
Sbjct: 32 PFFIERGDGG 41


>sp|ARLY_METKA|ARGININOSUCCINATE lyase|Methanopyrus kandleri (strain AV19 /

Query: 1 PFFYNR 6
P FYNR
Sbjct: 314 PMFYNR 319


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 1 PFFYNRQDNG 10
P++Y+ D+G
Sbjct: 526 PYYYSTYDSG 535


>sp|UBIX_METJA|FLAVIN prenyltransferase UbiX|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PFFYNRQDN 9
P FYN+ N
Sbjct: 147 PAFYNKPKN 155


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FYNRQD 8
FYNR+D
Sbjct: 656 FYNRED 661


>sp|GSA_HALMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PFFYNRQDNG 10
PFF + D G
Sbjct: 32 PFFVEKGDGG 41


>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 FYNRQD 8
FYNR+D
Sbjct: 671 FYNRED 676


>sp|Y414_METJA|UNCHARACTERIZED protein MJ0414|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PFFYNRQDNG 10
P++Y D G
Sbjct: 162 PYYYKEVDRG 171




588|Sequence|2936|2945|RQDNGTLLSL

>sp|SYFB_SULTO|PHENYLALANINE--TRNA ligase beta subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 QDNGTLLSL 10
QD+G +LSL
Sbjct: 196 QDDGQILSL 204


>sp|DMSA_HALSA|PUTATIVE dimethyl sulfoxide reductase catalytic|Halobacterium salinarum

Query: 1 RQDNGTLL 8
R D+GTLL
Sbjct: 318 RADDGTLL 325


>sp|GLCS_SACS2|GLUCOSE-BINDING protein GlcS|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 NGTLLSL 10
NGTLLS+
Sbjct: 183 NGTLLSV 189


>sp|PCNA2_SACS2|DNA polymerase sliding clamp 2|Saccharolobus solfataricus (strain ATCC

Query: 3 DNGTLL 8
DNGTLL
Sbjct: 180 DNGTLL 185


>sp|RADB_THEAC|DNA repair and recombination protein|Thermoplasma acidophilum (strain

Query: 3 DNGTLL 8
DNGTLL
Sbjct: 170 DNGTLL 175




589|Sequence|2941|2950|TLLSLEDLNG

>sp|BRIX_ARCFU|PROBABLE Brix domain-containing ribosomal biogenesis|Archaeoglobus

Query: 3 LSLEDLNG 10
LSLEDL G
Sbjct: 35 LSLEDLAG 42


>sp|UPPS_METMA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanosarcina mazei

Query: 3 LSLEDLN 9
LSLED+N
Sbjct: 178 LSLEDVN 184


>sp|RL10_HALMA|LARGE ribosomal subunit protein uL10|Haloarcula marismortui (strain

Query: 5 LEDLNG 10
LEDLNG
Sbjct: 78 LEDLNG 83




590|Sequence|2946|2955|EDLNGGILVD

>sp|HIS8_SULTO|HISTIDINOL-PHOSPHATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EDLNGGILVD 10
E +NG IL+D
Sbjct: 183 ESINGFILID 192


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 EDLNGGILVD 10
ED++GGI VD
Sbjct: 8344 EDVDGGISVD 8353


>sp|RNP2_METKA|RIBONUCLEASE P protein component 2|Methanopyrus kandleri (strain AV19 /

Query: 2 DLNGGIL 8
DLN GIL
Sbjct: 63 DLNAGIL 69


>sp|CFBE_METAC|COENZYME F(430) synthetase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EDLNGGILVD 10
++LNG +LVD
Sbjct: 353 KELNGVVLVD 362


>sp|IF2G_NATPD|TRANSLATION initiation factor 2 subunit|Natronomonas pharaonis (strain ATCC

Query: 1 EDLNGGIL 8
EDL GG+L
Sbjct: 228 EDLTGGVL 235


>sp|CHEB_PYRHO|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Pyrococcus horikoshii

Query: 1 EDLNGGILV 9
EDL GIL+
Sbjct: 189 EDLKAGILL 197


>sp|RS6E_METST|SMALL ribosomal subunit protein eS6|Methanosphaera stadtmanae (strain

Query: 1 EDLNGGIL 8
E+ NGG+L
Sbjct: 33 EEFNGGVL 40


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 DLNGGILV 9
D+N G+LV
Sbjct: 932 DINSGVLV 939


>sp|DHEB_HALSI|GLUTAMATE dehydrogenase B|Halobacterium salinarum (Halobacterium halobium)

Query: 2 DLNGGIL 8
D+NGG+L
Sbjct: 255 DVNGGVL 261


>sp|DHEB_HALSA|GLUTAMATE dehydrogenase B|Halobacterium salinarum (strain ATCC 700922

Query: 2 DLNGGIL 8
D+NGG+L
Sbjct: 255 DVNGGVL 261




591|Sequence|2951|2960|GILVDVNTAE

>sp|ADEC_METBU|ADENINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GILVDVNTAE 10
G+L++VNT E
Sbjct: 27 GLLINVNTKE 36


>sp|Y3021_SACS2|UNCHARACTERIZED protein SSO3021|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GILVDVNT 8
GI++DVNT
Sbjct: 46 GIMLDVNT 53


>sp|PDXS_THEVO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermoplasma volcanium (strain

Query: 1 GILVDVNTAE 10
G+++DV TAE
Sbjct: 26 GVIMDVTTAE 35


>sp|PDXS_PICTO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Picrophilus torridus (strain

Query: 1 GILVDVNTAE 10
G+++DV TAE
Sbjct: 29 GVIMDVTTAE 38


>sp|COFC_METTH|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 4 VDVNTAE 10
+DVNTAE
Sbjct: 177 LDVNTAE 183


>sp|LYSY_AERPE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 GILVDVNTA 9
GI+VDV A
Sbjct: 176 GIIVDVKAA 184


>sp|ACDB1_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 GILVDVNTAE 10
G L+D NT E
Sbjct: 237 GDLLDANTGE 246


>sp|PDXS_METAC|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanosarcina acetivorans

Query: 1 GILVDVNTAE 10
G+++DV T E
Sbjct: 27 GVIMDVTTPE 36


>sp|PDXS_METMA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanosarcina mazei (strain

Query: 1 GILVDVNTAE 10
G+++DV T E
Sbjct: 27 GVIMDVTTPE 36


>sp|PDXS_THEAC|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermoplasma acidophilum

Query: 1 GILVDVNTAE 10
G+++DV TA+
Sbjct: 26 GVIMDVTTAD 35


>sp|EF1A_SACS2|ELONGATION factor 1-alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GILVDVNTAE 10
GI+VDV A+
Sbjct: 422 GIIVDVKPAK 431




592|Sequence|2956|2965|VNTAEHSTVI

>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 NTAEHSTV 9
NTAE ST+
Sbjct: 503 NTAEKSTI 510


>sp|APGM1_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 TAEHSTVI 10
TA+HST I
Sbjct: 340 TADHSTPI 347




593|Sequence|2961|2970|HSTVITFSDY

>sp|HISX_METKA|HISTIDINOL dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 HSTVITFSDY 10
H T + F DY
Sbjct: 355 HLTAVPFGDY 364


>sp|Y1438_METS3|MEMO1 family protein Msm_1438|Methanobrevibacter smithii (strain ATCC

Query: 3 TVITFSDY 10
T+I+FSD+
Sbjct: 119 TLISFSDF 126




594|Sequence|2966|2975|TFSDYHEGSA

>sp|Y1164_METJA|PUTATIVE HTH-type transcriptional regulatory protein|Methanocaldococcus

Query: 1 TFSDYHEGS 9
TF DY EGS
Sbjct: 103 TFRDYLEGS 111


>sp|CH60_METAC|CHAPERONIN GroEL|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 FSDYHEGSA 10
FSDY GSA
Sbjct: 311 FSDYMLGSA 319


>sp|RAD50_THEKO|DNA double-strand break repair Rad50|Thermococcus kodakarensis (strain

Query: 2 FSDYHEGSA 10
F YH+GS+
Sbjct: 94 FVKYHDGSS 102


>sp|PUR2_METAR|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 TFSDYHEGSA 10
T DY+EG A
Sbjct: 242 TLDDYNEGVA 251


>sp|CS3HD_SACS2|CRISPR-ASSOCIATED endonuclease Cas3-HD|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TFSDYHE 7
TF DYH+
Sbjct: 176 TFDDYHD 182


>sp|Y1322_METST|UPF0280 protein Msp_1322|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 FSDYHEG 8
+SDY+EG
Sbjct: 205 YSDYYEG 211


>sp|GFO6_HALMA|D-XYLOSE 1-dehydrogenase [NADP(+)]|Haloarcula marismortui (strain ATCC

Query: 1 TFSDYHEGSA 10
T+ ++H+G+A
Sbjct: 78 TYEEFHDGAA 87




595|Sequence|2971|2980|HEGSAPALIM

>sp|SYTC_METS5|THREONINE--TRNA ligase catalytic subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 HEGSAPALIM 10
HE S P L++
Sbjct: 149 HEESGPGLVL 158


>sp|HELS_METBF|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina barkeri (strain Fusaro /

Query: 1 HEGSAPALI 9
H G+AP LI
Sbjct: 641 HYGAAPELI 649


>sp|AOCD_METTH|ORNITHINE cyclodeaminase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 HEGSAPAL 8
H GSAP +
Sbjct: 213 HTGSAPVI 220


>sp|DAPA_METBF|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 EGSAPALI 9
EG+ PALI
Sbjct: 3 EGAMPALI 10


>sp|DAPA_METAC|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EGSAPALI 9
EG+ PALI
Sbjct: 3 EGAMPALI 10




596|Sequence|2976|2985|PALIMNHTPW

>sp|COFE_METTH|COENZYME F420:L-glutamate ligase|Methanothermobacter thermautotrophicus

Query: 1 PALIMNHTPW 10
PA+I+ PW
Sbjct: 220 PAVIIRGYPW 229


>sp|Y434_METJA|GAMMA-GLUTAMYLCYCLOTRANSFERASE and putative RNase MJ0434|Methanocaldococcus jannaschii (strain

Query: 6 NHTPW 10
NH PW
Sbjct: 64 NHIPW 68


>sp|GLYA_STAMF|SERINE hydroxymethyltransferase|Staphylothermus marinus (strain ATCC

Query: 3 LIMNHTPW 10
L +NHT W
Sbjct: 18 LTVNHTIW 25


>sp|HPCAS_METS5|3-HYDROXYPROPIONYL-COENZYME A synthetase|Metallosphaera sedula (strain ATCC 51363

Query: 4 IMNHTPW 10
++N++PW
Sbjct: 393 VLNYSPW 399




597|Sequence|2981|2990|NHTPWDILTY

>sp|Y1552_ARCFU|UNCHARACTERIZED transporter AF_1552|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HTPWDILTY 10
H+PW I Y
Sbjct: 166 HSPWRITFY 174


>sp|GLMU_METJA|BIFUNCTIONAL protein GlmU|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PWDIL 8
PWDIL
Sbjct: 211 PWDIL 215


>sp|GLMU_METVS|BIFUNCTIONAL protein GlmU|Methanococcus vannielii (strain ATCC 35089

Query: 4 PWDILT 9
PWD+L+
Sbjct: 217 PWDVLS 222


>sp|GLMU_METMP|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain DSM 14266

Query: 4 PWDILT 9
PWD+L+
Sbjct: 213 PWDVLS 218


>sp|GLMU_METM7|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain C7 /

Query: 4 PWDILT 9
PWD+L+
Sbjct: 213 PWDVLS 218


>sp|GLMU_METM5|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain C5 /

Query: 4 PWDILT 9
PWD+L+
Sbjct: 213 PWDVLS 218


>sp|THIM1_METST|HYDROXYETHYLTHIAZOLE kinase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 NHTPWDILT 9
N TP DI+T
Sbjct: 108 NQTPIDIIT 116


>sp|SYFA_HALSA|PHENYLALANINE--TRNA ligase alpha subunit|Halobacterium salinarum (strain ATCC 700922

Query: 2 HTPWD 6
H+PWD
Sbjct: 321 HSPWD 325


>sp|SYFA_HALS3|PHENYLALANINE--TRNA ligase alpha subunit|Halobacterium salinarum (strain ATCC 29341

Query: 2 HTPWD 6
H+PWD
Sbjct: 321 HSPWD 325


>sp|T2M4_METJA|TYPE II restriction enzyme MjaIV|Methanocaldococcus jannaschii (strain

Query: 3 TPWDILTY 10
TP+D+L Y
Sbjct: 76 TPYDLLCY 83


>sp|Y434_METJA|GAMMA-GLUTAMYLCYCLOTRANSFERASE and putative RNase MJ0434|Methanocaldococcus jannaschii (strain

Query: 1 NHTPW 5
NH PW
Sbjct: 64 NHIPW 68


>sp|YFUS_PYRWO|UNCHARACTERIZED 12.3 kDa protein in|Pyrococcus woesei

Query: 4 PWDIL 8
PWDIL
Sbjct: 88 PWDIL 92


>sp|GUAAB_METBF|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina barkeri

Query: 4 PWDIL 8
PWD+L
Sbjct: 269 PWDVL 273


>sp|RL30_METS5|LARGE ribosomal subunit protein uL30|Metallosphaera sedula (strain ATCC

Query: 3 TPWDI 7
TPWD+
Sbjct: 15 TPWDL 19


>sp|RFCL_STAMF|REPLICATION factor C large subunit|Staphylothermus marinus (strain ATCC 43588

Query: 5 WDILTY 10
WD+L+Y
Sbjct: 305 WDLLSY 310


>sp|GLMU_META3|BIFUNCTIONAL protein GlmU|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 PWDIL 8
PWD+L
Sbjct: 213 PWDLL 217


>sp|CAS1B_SACS2|CRISPR-ASSOCIATED endonuclease Cas1 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 TPWDIL 8
TPW IL
Sbjct: 73 TPWGIL 78


>sp|Y2077_ARCFU|UNCHARACTERIZED protein AF_2077|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 TPWDILTY 10
TP DILT+
Sbjct: 79 TPNDILTF 86


>sp|AATB_META3|A-TYPE ATP synthase subunit B|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 WDILT 9
WDILT
Sbjct: 436 WDILT 440


>sp|RFCL_SULAC|REPLICATION factor C large subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 WDILTY 10
WD+L+Y
Sbjct: 303 WDLLSY 308


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NHTPWDIL 8
+H PW+++
Sbjct: 455 SHEPWNLI 462


>sp|RRP4_THEVO|EXOSOME complex component Rrp4|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NHTPWDI 7
N TPW I
Sbjct: 94 NDTPWRI 100


>sp|RFCL_SACI7|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 5 WDILTY 10
WD+L+Y
Sbjct: 302 WDLLSY 307


>sp|RFCL_SACI2|REPLICATION factor C large subunit|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 WDILTY 10
WD+L+Y
Sbjct: 302 WDLLSY 307


>sp|RFCL_SACI6|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 5 WDILTY 10
WD+L+Y
Sbjct: 302 WDLLSY 307


>sp|RFCL_SACI4|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 5 WDILTY 10
WD+L+Y
Sbjct: 302 WDLLSY 307


>sp|RFCL_SACI3|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.27)

Query: 5 WDILTY 10
WD+L+Y
Sbjct: 302 WDLLSY 307


>sp|RFCL_SACI1|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 5 WDILTY 10
WD+L+Y
Sbjct: 302 WDLLSY 307


>sp|CYAS_METMJ|CYSTEATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 HTPWDI 7
H PW++
Sbjct: 307 HPPWEV 312


>sp|RFCL_SULTO|REPLICATION factor C large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 WDILTY 10
WD+L+Y
Sbjct: 303 WDLLSY 308


>sp|RFCL_SACS2|REPLICATION factor C large subunit|Saccharolobus solfataricus (strain ATCC

Query: 5 WDILTY 10
WD+L+Y
Sbjct: 302 WDLLSY 307


>sp|PCKG_THEAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 HTPWD 6
H PWD
Sbjct: 187 HIPWD 191


>sp|COFD_METLZ|2-PHOSPHO-L-LACTATE transferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 WDILTY 10
WD+L+Y
Sbjct: 295 WDLLSY 300


>sp|COXX_THEVO|PROTOHEME IX farnesyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 TPWDIL 8
TPW+I+
Sbjct: 136 TPWNII 141


>sp|COXX_THEAC|PROTOHEME IX farnesyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 TPWDIL 8
TPW+I+
Sbjct: 136 TPWNII 141


>sp|RRP4_PICTO|EXOSOME complex component Rrp4|Picrophilus torridus (strain ATCC 700027

Query: 1 NHTPWDILT 9
N TPW + +
Sbjct: 90 NDTPWHVTS 98




598|Sequence|2986|2995|DILTYKQSGS

>sp|TRUD_THEGJ|PROBABLE tRNA pseudouridine synthase D|Thermococcus gammatolerans (strain

Query: 2 ILTYKQSGS 10
+ TYK++GS
Sbjct: 235 LYTYKKTGS 243


>sp|RNZ_THEGJ|RIBONUCLEASE Z|Thermococcus gammatolerans (strain DSM 15229

Query: 1 DILTYK 6
D+LTYK
Sbjct: 295 DVLTYK 300




599|Sequence|2991|3000|KQSGSPEEMV

>sp|Y887_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 3 SGSPEEM 9
SGSPEE+
Sbjct: 263 SGSPEEI 269


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 KQSGSPEEMV 10
K+ G PE+MV
Sbjct: 176 KELGIPEDMV 185


>sp|HIS5_METMA|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina mazei (strain

Query: 3 SGSPEEMV 10
SG+PEE++
Sbjct: 31 SGNPEEIL 38


>sp|HIS5_METAC|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina acetivorans

Query: 3 SGSPEEMV 10
SG+PEE++
Sbjct: 31 SGNPEEIL 38




600|Sequence|2996|3005|PEEMVLLPRQ

>sp|Y303_ARCFU|UNCHARACTERIZED protein AF_0303|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PEEMVLLPRQ 10
P+E+ LLP+Q
Sbjct: 252 PDEVKLLPKQ 261


>sp|ASSY_PYRAE|ARGININOSUCCINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 EEMVLLPRQ 10
E+MVL PR+
Sbjct: 287 EKMVLTPRE 295


>sp|MTNA_PYRFU|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus furiosus

Query: 1 PEEMVLLPR 9
PEE+ LPR
Sbjct: 7 PEELTKLPR 15


>sp|MTNA_PYRAB|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus abyssi (strain

Query: 1 PEEMVLLPRQ 10
PEE+ LPR
Sbjct: 7 PEELTKLPRS 16


>sp|SYE_METMJ|GLUTAMATE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 EEMVLLPR 9
EE +LLPR
Sbjct: 447 EEAILLPR 454


>sp|DLYKI_THEX4|D-LYXOSE ketol-isomerase|Thermofilum sp. (strain ex4484_79)

Query: 2 EEMVLLPRQ 10
+E+V+ PRQ
Sbjct: 62 KELVMFPRQ 70


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 1 PEEMVLLP 8
PEE V+LP
Sbjct: 26 PEERVILP 33


>sp|IF2P_PYRFU|PROBABLE translation initiation factor IF-2|Pyrococcus furiosus (strain

Query: 1 PEEMVLLP 8
PEE V+LP
Sbjct: 23 PEEKVVLP 30


>sp|NADA_THEGJ|QUINOLINATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PEEMVLLPRQ 10
PE+ VLLP +
Sbjct: 73 PEKTVLLPAK 82


>sp|NADA2_METAC|QUINOLINATE synthase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PEEMVLLP 8
PE+ VLLP
Sbjct: 79 PEKSVLLP 86


>sp|NADA_THEON|QUINOLINATE synthase|Thermococcus onnurineus (strain NA1)

Query: 1 PEEMVLLP 8
PE+ VLLP
Sbjct: 73 PEKTVLLP 80




601|Sequence|3001|3010|LLPRQARLFA

>sp|DGGGP_METKA|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 PRQARLFA 10
PR AR+FA
Sbjct: 77 PRSARMFA 84


>sp|KPYK_AERPE|PYRUVATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 4 RQARLFA 10
RQAR+FA
Sbjct: 205 RQARIFA 211


>sp|GATB_ARCFU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Archaeoglobus fulgidus (strain ATCC

Query: 3 PRQARLF 9
P++ARLF
Sbjct: 166 PKEARLF 172




602|Sequence|3006|3015|ARLFAWADPT

>sp|PURP_PYRAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum arsenaticum (strain DSM

Query: 1 ARLFAWADPT 10
R F WA+PT
Sbjct: 216 GRTFGWAEPT 225


>sp|PURP_PYRAE|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum aerophilum (strain ATCC

Query: 1 ARLFAWADPT 10
R F WA+PT
Sbjct: 222 GRTFGWAEPT 231


>sp|DCD_THESM|DCTP deaminase|Thermococcus sibiricus (strain DSM 12597

Query: 4 FAWADP 9
FAW DP
Sbjct: 91 FAWVDP 96


>sp|PURP_PYRCJ|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum calidifontis (strain DSM

Query: 1 ARLFAWADPT 10
R F W +PT
Sbjct: 214 GRTFGWVEPT 223


>sp|PURP_PYRIL|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ARLFAWADPT 10
R F W +PT
Sbjct: 214 GRTFGWVEPT 223


>sp|THYX_AERPE|FLAVIN-DEPENDENT thymidylate synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 RLFAWADPT 10
RLF WA P+
Sbjct: 259 RLFRWAGPS 267


>sp|DMSB_HALSA|PUTATIVE dimethyl sulfoxide reductase iron-sulfur|Halobacterium salinarum

Query: 1 ARLFAWADP 9
AR+F W +P
Sbjct: 117 ARVFNWDEP 125


>sp|DCD_PYRAB|DCTP deaminase|Pyrococcus abyssi (strain GE5 /

Query: 4 FAWADP 9
FAW DP
Sbjct: 91 FAWVDP 96


>sp|DCD_THEGJ|DCTP deaminase|Thermococcus gammatolerans (strain DSM 15229

Query: 4 FAWADP 9
FAW DP
Sbjct: 91 FAWVDP 96


>sp|DCD_PYRHO|DCTP deaminase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 FAWADP 9
FAW DP
Sbjct: 91 FAWVDP 96


>sp|DCD_THEKO|DCTP deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 FAWADP 9
FAW DP
Sbjct: 91 FAWVDP 96


>sp|PURP_PYRNV|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum neutrophilum (strain DSM

Query: 1 ARLFAWADPT 10
R F W +PT
Sbjct: 225 GRTFGWVEPT 234


>sp|DCD_PYRFU|DCTP deaminase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 FAWADP 9
FAW DP
Sbjct: 91 FAWVDP 96


>sp|DPH2_PYRHO|2-(3-AMINO-3-CARBOXYPROPYL)HISTIDINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RLFAWADP 9
+ F+W DP
Sbjct: 204 KAFSWIDP 211


>sp|ILVC_NATPD|KETOL-ACID reductoisomerase (NADP(+))|Natronomonas pharaonis (strain ATCC

Query: 3 LFAWAD 8
LFAW D
Sbjct: 325 LFAWGD 330


>sp|ILVC_HALWD|KETOL-ACID reductoisomerase (NADP(+))|Haloquadratum walsbyi (strain DSM 16790

Query: 3 LFAWAD 8
LFAW+D
Sbjct: 347 LFAWSD 352


>sp|RS12_METHJ|SMALL ribosomal subunit protein uS12|Methanospirillum hungatei JF-1

Query: 4 FAWADP 9
F W+DP
Sbjct: 18 FRWSDP 23


>sp|HELS_NATPD|ATP-DEPENDENT DNA helicase Hel308|Natronomonas pharaonis (strain ATCC 35678

Query: 4 FAWADP 9
+ WADP
Sbjct: 411 YVWADP 416


>sp|HELS_HALMA|ATP-DEPENDENT DNA helicase Hel308|Haloarcula marismortui (strain ATCC 43049

Query: 4 FAWADP 9
+ WADP
Sbjct: 411 YVWADP 416




603|Sequence|3011|3020|WADPTGTRKL

>sp|PSTB_PYRAB|PHOSPHATE import ATP-binding protein PstB|Pyrococcus abyssi (strain GE5 /

Query: 3 DPTGTRKL 10
DP GTRK+
Sbjct: 181 DPVGTRKI 188


>sp|Y3016_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 3 DPTGTRKL 10
DP+GTR++
Sbjct: 182 DPSGTREV 189


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 WADPTGTRKL 10
W D +G RKL
Sbjct: 943 WDDISGVRKL 952


>sp|Y2030_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 3 DPTGTRKL 10
DP GTR++
Sbjct: 175 DPQGTREI 182


>sp|Y1893_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 3 DPTGTRKL 10
DP GTR++
Sbjct: 175 DPQGTREI 182


>sp|Y870_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 3 DPTGTRKL 10
DP GTR++
Sbjct: 181 DPLGTREI 188


>sp|Y3887_METAC|UPF0284 protein MA_3887|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 WADPTGTRK 9
W DP T+K
Sbjct: 3 WIDPEVTKK 11


>sp|RS2_CENSY|SMALL ribosomal subunit protein uS2|Cenarchaeum symbiosum (strain A)

Query: 3 DPTGTRKL 10
DPTGT L
Sbjct: 40 DPTGTYTL 47


>sp|PSTB_THEKO|PHOSPHATE import ATP-binding protein PstB|Thermococcus kodakarensis (strain

Query: 3 DPTGTRKL 10
DP GT K+
Sbjct: 181 DPVGTAKI 188


>sp|PSTB_PYRFU|PHOSPHATE import ATP-binding protein PstB|Pyrococcus furiosus (strain ATCC

Query: 3 DPTGTRKL 10
DP GT K+
Sbjct: 181 DPVGTAKI 188




604|Sequence|3016|3025|GTRKLTWTYA

>sp|SECY_SULAC|PROTEIN translocase subunit SecY|Sulfolobus acidocaldarius (strain ATCC

Query: 2 TRKLTWTY 9
TRKL WT+
Sbjct: 27 TRKLLWTF 34


>sp|SECY_HALMA|PROTEIN translocase subunit SecY|Haloarcula marismortui (strain ATCC

Query: 3 RKLTWT 8
RKLTWT
Sbjct: 28 RKLTWT 33


>sp|OTC_HALWD|ORNITHINE carbamoyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GTRKLTWTYA 10
GTR L W A
Sbjct: 273 GTRTLVWDQA 282


>sp|SAHH_HALWD|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16790

Query: 1 GTRKLTWT 8
G RK+ WT
Sbjct: 26 GRRKMEWT 33


>sp|SAHH_HALWC|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16854

Query: 1 GTRKLTWT 8
G RK+ WT
Sbjct: 26 GRRKMEWT 33


>sp|Y1609_METJA|UNCHARACTERIZED ATP-binding protein MJ1609|Methanocaldococcus jannaschii (strain

Query: 1 GTRKLTWT 8
G RKL W+
Sbjct: 168 GNRKLLWS 175


>sp|KUP_METAC|PROBABLE potassium transport system protein|Methanosarcina acetivorans

Query: 1 GTRKLTWTYA 10
GT ++TW +
Sbjct: 159 GTEEITWVFG 168


>sp|IDH_CALNO|ISOCITRATE dehydrogenase [NADP]|Caldococcus noboribetus

Query: 1 GTRKLTW 7
GTR++ W
Sbjct: 65 GTRRIVW 71


>sp|KUP_METBF|PROBABLE potassium transport system protein|Methanosarcina barkeri (strain

Query: 1 GTRKLTWTYA 10
G K+TW +
Sbjct: 159 GIEKITWVFG 168


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 5 LTWTYA 10
L WTYA
Sbjct: 369 LNWTYA 374




605|Sequence|3021|3030|TWTYAANVGE

>sp|Y416_METJA|DOUBLE zinc ribbon protein MJ0416|Methanocaldococcus jannaschii (strain

Query: 2 WTYAANVG 9
WTY N G
Sbjct: 112 WTYCTNCG 119


>sp|BIOF_METVS|PUTATIVE 8-amino-7-oxononanoate synthase|Methanococcus vannielii (strain

Query: 4 YAANVG 9
YAANVG
Sbjct: 96 YAANVG 101


>sp|AOR_PYRHO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus horikoshii (strain

Query: 1 TWTYAANVG 9
TW AN+G
Sbjct: 315 TWALGANLG 323


>sp|AOR_PYRAB|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus abyssi (strain GE5 /

Query: 1 TWTYAANVG 9
TW AN+G
Sbjct: 315 TWALGANLG 323


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 WTYAANVG 9
W + AN+G
Sbjct: 270 WNFLANLG 277


>sp|GYRB_HALL2|DNA gyrase subunit B|Haloferax lucentense (strain DSM 14919

Query: 2 WTYAANVGE 10
WT+ VGE
Sbjct: 142 WTHRFEVGE 150


>sp|GYRB_HALVD|DNA gyrase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 2 WTYAANVGE 10
WT+ VGE
Sbjct: 142 WTHRFEVGE 150




606|Sequence|3026|3035|ANVGEHDLLK

>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 VGEHDLLK 10
VG+HDLL+
Sbjct: 182 VGDHDLLE 189


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 VGEHDLLK 10
VG+HDLL+
Sbjct: 184 VGDHDLLE 191


>sp|ACD1_ARCFU|ACETATE--COA ligase [ADP-forming] I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NVGEHDLLK 10
NVGE+DL K
Sbjct: 531 NVGENDLEK 539


>sp|Y3401_METJA|UNCHARACTERIZED protein MJECS01|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NVGEHDLLK 10
N GEHD LK
Sbjct: 232 NYGEHDDLK 240


>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 1 ANVGEHD 7
AN+ EHD
Sbjct: 105 ANIREHD 111


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VGEHDLLK 10
+G+HDL++
Sbjct: 193 LGDHDLME 200


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 VGEHDLLK 10
+G+HDL++
Sbjct: 193 LGDHDLME 200


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 ANVGEHD 7
AN+GE+D
Sbjct: 714 ANLGEYD 720


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 VGEHDLLK 10
V +HDLLK
Sbjct: 194 VEDHDLLK 201


>sp|HPRT_METRM|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanobrevibacter ruminantium (strain

Query: 4 GEHDLLK 10
GEH++LK
Sbjct: 92 GEHEILK 98


>sp|SPSS_METJA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 EHDLLK 10
EHDL+K
Sbjct: 305 EHDLIK 310




607|Sequence|3031|3040|HDLLKDGCGQ

>sp|FILR1_METH6|METHANOGENESIS regulatory protein FilR1|Methanothrix harundinacea (strain 6Ac)

Query: 3 LLKDGCG 9
LL DGCG
Sbjct: 352 LLPDGCG 358


>sp|Y1141_METJA|UNCHARACTERIZED protein MJ1141|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LLKDGC 8
LL+DGC
Sbjct: 192 LLRDGC 197


>sp|MUTL_METTP|DNA mismatch repair protein MutL|Methanothrix thermoacetophila

Query: 3 LLKDGCG 9
L+ DGCG
Sbjct: 57 LVDDGCG 63


>sp|LEU1_SULTO|2-ISOPROPYLMALATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HDLLKD 6
HDL+KD
Sbjct: 185 HDLIKD 190


>sp|CCA_HALMA|CCA-ADDING enzyme|Haloarcula marismortui (strain ATCC 43049

Query: 1 HDLLKDG 7
HD+L DG
Sbjct: 92 HDVLPDG 98


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 HDLLKD 6
HDL+KD
Sbjct: 251 HDLVKD 256


>sp|MTAA_METBF|METHYLCOBAMIDE:COM methyltransferase MtaA|Methanosarcina barkeri (strain Fusaro /

Query: 2 DLLKDGCG 9
D+L GCG
Sbjct: 310 DVLAPGCG 317


>sp|MTAA_METBA|METHYLCOBAMIDE:COM methyltransferase MtaA|Methanosarcina barkeri

Query: 2 DLLKDGCG 9
D+L GCG
Sbjct: 310 DVLAPGCG 317


>sp|AATB_SULTO|A-TYPE ATP synthase subunit B|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 LLKDGCGQ 10
L+KDG G+
Sbjct: 355 LMKDGIGE 362


>sp|AATB_NITMS|A-TYPE ATP synthase subunit B|Nitrosopumilus maritimus (strain SCM1)

Query: 3 LLKDGCGQ 10
L+KDG G+
Sbjct: 355 LMKDGIGE 362


>sp|AATB_CENSY|A-TYPE ATP synthase subunit B|Cenarchaeum symbiosum (strain A)

Query: 3 LLKDGCGQ 10
L+KDG G+
Sbjct: 355 LMKDGIGE 362


>sp|HELS_CALMQ|ATP-DEPENDENT DNA helicase Hel308|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 HDLLKDG 7
H L+KDG
Sbjct: 724 HQLVKDG 730




608|Sequence|3036|3045|DGCGQFPYDA

>sp|FTTA_PYRHO|TRANSCRIPTION termination factor FttA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DGCGQFPY 8
D CG PY
Sbjct: 260 DHCGMLPY 267


>sp|SYC_PYRAR|CYSTEINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 CGQFPYDA 10
CG PYD+
Sbjct: 27 CGITPYDS 34


>sp|CSG_METSC|CELL surface glycoprotein|Methanothermus sociabilis

Query: 1 DGCGQFPY 8
DG G PY
Sbjct: 344 DGTGNIPY 351


>sp|CSG_METFV|CELL surface glycoprotein|Methanothermus fervidus (strain ATCC 43054

Query: 1 DGCGQFPY 8
DG G PY
Sbjct: 344 DGTGNIPY 351


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 CGQFPYDA 10
C + P+DA
Sbjct: 688 CAELPHDA 695


>sp|SYC_NANEQ|CYSTEINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 CGQFPYD 9
CG PYD
Sbjct: 28 CGVTPYD 34


>sp|Y1109_METTH|PUTATIVE nickel insertion protein|Methanothermobacter thermautotrophicus

Query: 2 GCGQFPYD 9
G GQ P+D
Sbjct: 242 GSGQVPHD 249


>sp|CBIA_METTH|COBYRINATE a,c-diamide synthase|Methanothermobacter thermautotrophicus (strain

Query: 3 CGQFPYDA 10
CG FP+ A
Sbjct: 345 CGVFPHPA 352


>sp|GCH3_PYRNV|GTP cyclohydrolase III|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 GCGQFPYDA 10
G G+ PY+A
Sbjct: 89 GVGETPYEA 97


>sp|SYC_PYRNV|CYSTEINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 CGQFPYD 9
CG PYD
Sbjct: 27 CGITPYD 33


>sp|SYC_PYRIL|CYSTEINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 CGQFPYD 9
CG PYD
Sbjct: 27 CGITPYD 33


>sp|SYC_PYRCJ|CYSTEINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 CGQFPYD 9
CG PYD
Sbjct: 27 CGITPYD 33


>sp|SYC_PYRAE|CYSTEINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 CGQFPYD 9
CG PYD
Sbjct: 29 CGITPYD 35


>sp|GATA_METST|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosphaera stadtmanae (strain ATCC

Query: 3 CGQFPYD 9
CG PYD
Sbjct: 226 CGYDPYD 232


>sp|SYS_HALSA|SERINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DGCGQFP 7
+G GQFP
Sbjct: 208 EGTGQFP 214


>sp|SYS_HALS3|SERINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DGCGQFP 7
+G GQFP
Sbjct: 208 EGTGQFP 214




609|Sequence|3041|3050|FPYDANIQIH

>sp|TRPE3_HALMA|ANTHRANILATE synthase component 1 3|Haloarcula marismortui (strain ATCC 43049

Query: 2 PYDANIQIH 10
P+D N++IH
Sbjct: 157 PHDGNVEIH 165


>sp|KHSE_META3|HOMOSERINE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 FPYDANIQIH 10
F D NIQIH
Sbjct: 84 FNIDKNIQIH 93


>sp|Y1115_HALSA|PROBABLE S-adenosyl-L-methionine-binding protein VNG_1115H|Halobacterium

Query: 2 PYDANIQIH 10
PY AN+Q++
Sbjct: 27 PYAANVQVY 35


>sp|DNAG_DESA1|DNA primase DnaG|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 PYDANIQI 9
PYDA+I I
Sbjct: 92 PYDASISI 99


>sp|AGOG_METMP|N-GLYCOSYLASE/DNA lyase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FPYDANIQI 9
FPY NI+I
Sbjct: 174 FPYPMNIEI 182


>sp|AGL13_HALVD|PROBABLE low-salt glycan biosynthesis epimerase|Haloferax volcanii (strain

Query: 1 FPYDANIQIH 10
PYD N +IH
Sbjct: 146 IPYDWNAEIH 155


>sp|ADH_SULAC|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FPYDANIQIH 10
P+DA +++H
Sbjct: 272 LPHDAGLRLH 281


>sp|CAPPA_METMA|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PYDANIQI 9
PY N+QI
Sbjct: 54 PYHQNVQI 61


>sp|CAPPA_METAC|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PYDANIQI 9
PY N+QI
Sbjct: 54 PYHQNVQI 61


>sp|RRP4_PYRAB|EXOSOME complex component Rrp4|Pyrococcus abyssi (strain GE5 /

Query: 2 PYDANIQIH 10
PY AN++I
Sbjct: 87 PYPANLKIQ 95


>sp|CDC62_HALSA|ORC1-TYPE DNA replication protein 2|Halobacterium salinarum (strain ATCC

Query: 2 PYDAN 6
PYDAN
Sbjct: 219 PYDAN 223


>sp|Y609_ARCFU|UNCHARACTERIZED protein AF_0609|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PYDANIQI 9
P DAN++I
Sbjct: 23 PVDANVRI 30


>sp|GCST_NATPD|PROBABLE aminomethyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PYDANI 7
PY+ANI
Sbjct: 249 PYEANI 254


>sp|CDC64_HALSA|ORC1-TYPE DNA replication protein 4|Halobacterium salinarum (strain ATCC

Query: 2 PYDAN 6
PYDAN
Sbjct: 219 PYDAN 223


>sp|Y410_METJA|UNCHARACTERIZED ATP-binding protein MJ0410|Methanocaldococcus jannaschii (strain

Query: 1 FPYDANIQ 8
PYD N++
Sbjct: 191 LPYDQNVE 198


>sp|GATB_METMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina mazei (strain ATCC

Query: 4 DANIQIH 10
DAN+ +H
Sbjct: 202 DANVSVH 208


>sp|GATB_METBF|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 4 DANIQIH 10
DAN+ +H
Sbjct: 202 DANVSVH 208


>sp|GATB_METAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 4 DANIQIH 10
DAN+ +H
Sbjct: 202 DANVSVH 208




610|Sequence|3046|3055|NIQIHWVSFL

>sp|COFH_METHJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanospirillum hungatei JF-1 (strain

Query: 1 NIQIHWVSF 9
NIQ+ WV
Sbjct: 294 NIQVSWVKL 302


>sp|COFH_META3|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus aeolicus (strain ATCC

Query: 1 NIQIHWVSF 9
NIQ+ WV
Sbjct: 290 NIQVSWVKL 298


>sp|COFH_METPE|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanosphaerula palustris (strain ATCC

Query: 1 NIQIHWV 7
NIQ+ WV
Sbjct: 294 NIQVSWV 300


>sp|NASD_HALMT|ASSIMILATORY ferredoxin-dependent nitrite reductase|Haloferax mediterranei

Query: 1 NIQIHWVSF 9
+IQ+HW+
Sbjct: 108 SIQLHWLEL 116


>sp|DHOM_PYRHO|HOMOSERINE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 IHWVSF 9
+HWVS+
Sbjct: 219 LHWVSY 224


>sp|PYRG_PICTO|CTP synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 NIQIHWV 7
++ IHWV
Sbjct: 314 SVNIHWV 320


>sp|Y2239_ARCFU|UNCHARACTERIZED protein AF_2239|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 HWVSF 9
HW+SF
Sbjct: 291 HWLSF 295


>sp|DNLI_ARCFU|DNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IQIHW 6
+Q+HW
Sbjct: 255 VQVHW 259




611|Sequence|3051|3060|WVSFLDGRQR

>sp|KPTA_METKA|PROBABLE RNA 2'-phosphotransferase|Methanopyrus kandleri (strain AV19 /

Query: 4 FLDGRQR 10
FLDGR+R
Sbjct: 29 FLDGRRR 35


>sp|MUTS_HALWD|DNA mismatch repair protein MutS|Haloquadratum walsbyi (strain DSM

Query: 1 WVSFLDGRQR 10
WVS L+ R+R
Sbjct: 483 WVSELETRER 492


>sp|RIBL_HALVD|FAD synthase|Haloferax volcanii (strain ATCC 29605

Query: 5 LDGRQR 10
LDGRQR
Sbjct: 49 LDGRQR 54


>sp|RIBL_HALJB|FAD synthase|Halalkalicoccus jeotgali (strain DSM 18796

Query: 5 LDGRQR 10
LDGRQR
Sbjct: 49 LDGRQR 54


>sp|KAE1B_METAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 VSFLDGRQR 10
+SF++GR R
Sbjct: 143 ISFMEGRYR 151


>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 WVSFLDGR 8
W LDGR
Sbjct: 617 WAGILDGR 624


>sp|KCY_THEAC|CYTIDYLATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 WVSFLDG 7
W+S+L+G
Sbjct: 86 WISYLNG 92


>sp|RL18_AERPE|LARGE ribosomal subunit protein uL18|Aeropyrum pernix (strain ATCC

Query: 1 WVSFLDGR 8
WV FL+ R
Sbjct: 45 WVQFLEAR 52


>sp|PRNK_THEKO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase TK1956|Thermococcus kodakarensis (strain ATCC

Query: 1 WVSFLDGR 8
W++F +GR
Sbjct: 306 WINFSEGR 313


>sp|MPTA_KORCO|GTP cyclohydrolase MptA|Korarchaeum cryptofilum (strain OPF8)

Query: 1 WVSFLDGRQ 9
WVS +GR+
Sbjct: 51 WVSLPEGRR 59




612|Sequence|3056|3065|DGRQRVLLFT

>sp|GSA_METKA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanopyrus kandleri (strain AV19 /

Query: 1 DGRQRVLLF 9
DG +R+L+F
Sbjct: 231 DGTERLLIF 239


>sp|TRPB_THEGJ|TRYPTOPHAN synthase beta chain|Thermococcus gammatolerans (strain DSM 15229

Query: 1 DGRQRVLLF 9
+GR+ V+LF
Sbjct: 399 EGREEVILF 407


>sp|TRPB2_THEKO|TRYPTOPHAN synthase beta chain 2|Thermococcus kodakarensis (strain ATCC

Query: 1 DGRQRVLLF 9
+GR+ V+LF
Sbjct: 399 EGREEVILF 407




613|Sequence|3061|3070|VLLFTDDVAL

>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 2 LLFTDDVAL 10
LLFTDDV +
Sbjct: 523 LLFTDDVRI 531


>sp|RPO11_HALLT|DNA-DIRECTED RNA polymerase subunit Rpo11|Halorubrum lacusprofundi (strain

Query: 1 VLLFTDDVA 9
VLL TDDVA
Sbjct: 31 VLLETDDVA 39


>sp|Y1715_METAC|UPF0280 protein MA_1715|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LFTDDVAL 10
+F+DDV+L
Sbjct: 181 IFSDDVSL 188


>sp|IF2P_HALWD|PROBABLE translation initiation factor IF-2|Haloquadratum walsbyi (strain

Query: 1 VLLFTDDV 8
V LFTDDV
Sbjct: 453 VRLFTDDV 460


>sp|Y309_METBU|UPF0280 protein Mbur_0309|Methanococcoides burtonii (strain DSM 6242

Query: 2 LLFTDDVAL 10
++F+DDV+L
Sbjct: 164 VVFSDDVSL 172




614|Sequence|3066|3075|DDVALVSKAL

>sp|RRP4_METBF|EXOSOME complex component Rrp4|Methanosarcina barkeri (strain Fusaro /

Query: 1 DDVALVSKAL 10
DDV L+SKAL
Sbjct: 185 DDVELLSKAL 194


>sp|IDI2_METBU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DDVALVSKAL 10
DDV L+ KAL
Sbjct: 29 DDVMLIHKAL 38


>sp|YPZ5_METTF|UNCHARACTERIZED protein ORF5'|Methanothermobacter thermautotrophicus

Query: 1 DDVALVSKAL 10
DD ALVS A+
Sbjct: 370 DDTALVSAAI 379


>sp|Y1154_METJA|UNCHARACTERIZED protein MJ1154|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DDVALVS 7
DD+ALVS
Sbjct: 240 DDIALVS 246


>sp|RRP4_METAC|EXOSOME complex component Rrp4|Methanosarcina acetivorans (strain ATCC

Query: 1 DDVALVSKAL 10
+D+ L+SKAL
Sbjct: 185 EDIELLSKAL 194




615|Sequence|3071|3080|VSKALQAEEM

>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VSKALQAEE 9
V KALQAE+
Sbjct: 805 VVKALQAED 813




616|Sequence|3076|3085|QAEEMEQADY

>sp|HMEC_ARCFU|HDR-LIKE menaquinol oxidoreductase cytochrome b-like|Archaeoglobus fulgidus

Query: 1 QAEEMEQADY 10
Q +E+E+ADY
Sbjct: 316 QLQEIEEADY 325


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 3 EEMEQADY 10
EE+E+ADY
Sbjct: 303 EELERADY 310


>sp|GATA_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C6 /

Query: 1 QAEEMEQADY 10
+AEE+E+ DY
Sbjct: 32 EAEELEKNDY 41


>sp|SYY_THEAC|TYROSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 QAEEMEQADY 10
QAE + +ADY
Sbjct: 96 QAEGLTKADY 105


>sp|DHQS_METLZ|3-DEHYDROQUINATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 AEEMEQA 8
AEEME+A
Sbjct: 77 AEEMEEA 83


>sp|DTDA_METJA|D-AMINOACYL-TRNA deacylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AEEMEQADY 10
AE++E ADY
Sbjct: 39 AEDLEYADY 47




617|Sequence|3081|3090|EQADYEITLS

>sp|PURT_META3|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus aeolicus

Query: 4 DYEITL 9
DYEITL
Sbjct: 202 DYEITL 207


>sp|PURT_METMP|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 4 DYEITL 9
DYEITL
Sbjct: 199 DYEITL 204


>sp|PURT_METM5|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 4 DYEITL 9
DYEITL
Sbjct: 199 DYEITL 204


>sp|TRM56_NATPD|TRNA (cytidine(56)-2'-O)-methyltransferase|Natronomonas pharaonis

Query: 1 EQADYEITLS 10
EQADY + ++
Sbjct: 122 EQADYNVGVT 131


>sp|PURT_METM7|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 4 DYEITL 9
DYEITL
Sbjct: 199 DYEITL 204




618|Sequence|3086|3095|EITLSLHSLG

>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 TLSLHSL 9
TLSLHSL
Sbjct: 442 TLSLHSL 448


>sp|Y330_METJA|UNCHARACTERIZED protein MJ0330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EITLSLHSL 9
EIT+ LH++
Sbjct: 63 EITMDLHTI 71


>sp|LYSZ_PYRIL|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum

Query: 1 EITLSLHSLG 10
+I SLH+LG
Sbjct: 82 QIVASLHALG 91


>sp|LYSZ_PYRNV|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum

Query: 2 ITLSLHSLG 10
I SLH+LG
Sbjct: 83 IVASLHALG 91


>sp|LYSZ_PYRAR|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum

Query: 2 ITLSLHSLG 10
I SLH+LG
Sbjct: 83 IVASLHALG 91




619|Sequence|3091|3100|LHSLGLSLVN

>sp|GYRB_HALVD|DNA gyrase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 1 LHSLGLSLVN 10
LH +G+S+VN
Sbjct: 116 LHGVGVSVVN 125


>sp|GYRB_HALL2|DNA gyrase subunit B|Haloferax lucentense (strain DSM 14919

Query: 1 LHSLGLSLVN 10
LH +G+S+VN
Sbjct: 116 LHGVGVSVVN 125


>sp|GYRB_ARCFU|DNA gyrase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LHSLGLSLVN 10
LH +G+S+VN
Sbjct: 118 LHGVGVSVVN 127


>sp|Y148_PYRAR|UPF0215 protein Pars_0148|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LHSLGLSLVN 10
L++LGL LVN
Sbjct: 177 LNTLGLRLVN 186


>sp|PGP_PYRAB|PHOSPHOGLYCOLATE phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 1 LHSLGLSLV 9
+H LGL+LV
Sbjct: 129 IHELGLNLV 137


>sp|Y1893_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 1 LHSLGLSL 8
LHSLGL +
Sbjct: 237 LHSLGLEI 244


>sp|VORD_PYRHO|KETOISOVALERATE oxidoreductase subunit VorD|Pyrococcus horikoshii (strain ATCC

Query: 3 SLGLSLVN 10
SLG++LVN
Sbjct: 29 SLGITLVN 36


>sp|Y774_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0774|Methanocaldococcus

Query: 1 LHSLGLSL 8
+HSLG+S+
Sbjct: 317 MHSLGISV 324


>sp|LCAO_UNCAR|LONG-CHAIN alcohol oxidase|Uncultured marine euryarchaeote

Query: 1 LHSLGL 6
LHSLGL
Sbjct: 103 LHSLGL 108


>sp|Y661_METTH|PUTATIVE ammonium transporter MTH_661|Methanothermobacter

Query: 2 HSLGLSLVN 10
H +G+SL+N
Sbjct: 77 HQVGISLIN 85


>sp|WECC_METVS|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LHSLGLSLVN 10
LHSL S+VN
Sbjct: 358 LHSLEDSIVN 367


>sp|MV3K_PICTO|MEVALONATE-3-KINASE torridus (strain ATCC 700027

Query: 1 LHSLGLSLVN 10
LH +G+ ++N
Sbjct: 247 LHDVGVDIIN 256


>sp|KAE1_IGNH4|TRNA N6-adenosine threonylcarbamoyltransferase|Ignicoccus hospitalis

Query: 2 HSLGLSLVN 10
H++G+ +VN
Sbjct: 11 HTIGVGIVN 19


>sp|K6PF_METAC|ADP-SPECIFIC phosphofructokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LHSLGLSLV 9
+HSLGL V
Sbjct: 303 VHSLGLDTV 311




620|Sequence|3096|3105|LSLVNNESKQ

>sp|RS7_METST|SMALL ribosomal subunit protein uS7|Methanosphaera stadtmanae (strain

Query: 1 LSLVNNESKQ 10
L ++NN++KQ
Sbjct: 80 LEIINNKTKQ 89


>sp|LONB_METTH|ARCHAEAL Lon protease|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 LVNNESKQ 10
LVNNE +Q
Sbjct: 186 LVNNEGRQ 193




621|Sequence|3101|3110|NESKQEVSYI

>sp|DTDA_METLZ|D-AMINOACYL-TRNA deacylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 SKQEVSYI 10
SKQE+S+I
Sbjct: 239 SKQEISHI 246




622|Sequence|3106|3115|EVSYIGITSS

>sp|COAD_PYRFU|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EVSYIGITS 9
E+ YIG+TS
Sbjct: 33 EIVYIGLTS 41


>sp|CDC61_SACS2|ORC1-TYPE DNA replication protein 1|Saccharolobus solfataricus (strain ATCC

Query: 1 EVSYIGITSS 10
++S+IGIT+
Sbjct: 174 KISFIGITND 183


>sp|RL3_METST|LARGE ribosomal subunit protein uL3|Methanosphaera stadtmanae (strain

Query: 1 EVSYIGITS 9
E+SYI TS
Sbjct: 325 EISYISTTS 333


>sp|COAD_PYRAB|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 EVSYIGITS 9
++ YIG+TS
Sbjct: 32 KIVYIGLTS 40




623|Sequence|3111|3120|GITSSGVVWE

>sp|RL4_METHJ|LARGE ribosomal subunit protein uL4|Methanospirillum hungatei JF-1

Query: 1 GITSSGVVW 9
GIT+S V W
Sbjct: 53 GITASAVGW 61


>sp|SERK_THEKO|ADP-DEPENDENT L-serine kinase SerK|Thermococcus kodakarensis (strain ATCC

Query: 2 ITSSGVVWE 10
+T SG+ W+
Sbjct: 44 VTGSGIFWK 52


>sp|SYH_METB6|HISTIDINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 GITSSGVVWE 10
+ ++GV WE
Sbjct: 145 ALNATGVTWE 154


>sp|Y1085_PICTO|PUTATIVE adenine deaminase PTO1085|Picrophilus torridus (strain ATCC 700027

Query: 2 ITSSGVV 8
ITSSG+V
Sbjct: 551 ITSSGIV 557




624|Sequence|3116|3125|GVVWEVKPKQ

>sp|NIFD_METBA|NITROGENASE molybdenum-iron protein alpha chain|Methanosarcina barkeri

Query: 1 GVVWEVKP 8
G +WEVKP
Sbjct: 229 GDLWEVKP 236


>sp|PCNA_NANEQ|DNA polymerase sliding clamp|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 VVWEVKPK 9
V+WE+KP+
Sbjct: 47 VIWEMKPE 54


>sp|EF1A_SULTO|ELONGATION factor 1-alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GVVWEVKPKQ 10
GVV +VKPK+
Sbjct: 422 GVVIDVKPKK 431


>sp|Y3388_METAC|UNCHARACTERIZED serpin-like protein MA_3388|Methanosarcina acetivorans (strain ATCC

Query: 2 VVWEVKPKQ 10
+ W+ KPK+
Sbjct: 384 ISWDAKPKE 392


>sp|SYH_METB6|HISTIDINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 GVVWEVK 7
GV WE+K
Sbjct: 150 GVTWELK 156


>sp|HIS8_HALMA|HISTIDINOL-PHOSPHATE aminotransferase|Haloarcula marismortui (strain ATCC 43049

Query: 3 VWEVKPKQ 10
+W+V P+Q
Sbjct: 77 MWDVTPEQ 84


>sp|FBPAP_CENSY|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Cenarchaeum symbiosum (strain A)

Query: 2 VVWEVKP 8
V+WE KP
Sbjct: 178 VLWEDKP 184


>sp|GATE_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum aerophilum (strain ATCC

Query: 1 GVVWEVKPKQ 10
VVWEV+ ++
Sbjct: 58 AVVWEVRKRR 67


>sp|EF1A_SULAC|ELONGATION factor 1-alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GVVWEVKPKQ 10
GV+ +VKP++
Sbjct: 422 GVIIDVKPRK 431


>sp|MCM_SACI5|MINICHROMOSOME maintenance protein MCM|Saccharolobus islandicus (strain REY15A)

Query: 1 GVVWEVKPK 9
G+++E KP+
Sbjct: 673 GIIYEAKPE 681


>sp|SYFB_HALMA|PHENYLALANINE--TRNA ligase beta subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 GVVWEVKPK 9
GV+ E+ PK
Sbjct: 554 GVIGEIHPK 562


>sp|SYD_THEKO|ASPARTATE--TRNA(ASP) ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GVVWEVK 7
G VWEVK
Sbjct: 23 GWVWEVK 29


>sp|MCM_SACS2|MINICHROMOSOME maintenance protein MCM|Saccharolobus solfataricus (strain ATCC

Query: 1 GVVWEVKPK 9
G+++E KP+
Sbjct: 673 GIIYEAKPE 681


>sp|GATE_PYRAR|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum arsenaticum (strain DSM

Query: 1 GVVWEVKPKQ 10
VVWEV+ ++
Sbjct: 58 AVVWEVRKRR 67


>sp|GATE_PYRCJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum calidifontis (strain DSM

Query: 1 GVVWEVKPKQ 10
VVWEV+ ++
Sbjct: 58 AVVWEVRKRR 67


>sp|EF1A_PYRAE|ELONGATION factor 1-alpha|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GVVWEVKPKQ 10
G + EVKP Q
Sbjct: 431 GQILEVKPAQ 440


>sp|EF1A_DESMO|ELONGATION factor 1-alpha|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 1 GVVWEVKPKQ 10
G V E+KP Q
Sbjct: 424 GQVLEIKPAQ 433


>sp|EF1A_PYRAR|ELONGATION factor 1-alpha|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GVVWEVKPKQ 10
G + EVKP Q
Sbjct: 431 GQILEVKPAQ 440


>sp|EF1A_PYRCJ|ELONGATION factor 1-alpha|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GVVWEVKPKQ 10
G + EVKP Q
Sbjct: 431 GQILEVKPAQ 440


>sp|PYRC_THEKO|DIHYDROOROTASE kodakarensis (strain ATCC BAA-918

Query: 4 WEVKPKQ 10
W+VKP++
Sbjct: 352 WKVKPEE 358


>sp|RRP4_THEAM|EXOSOME complex component Rrp4|Thermosphaera aggregans (strain DSM 11486

Query: 1 GVVWEVKPKQ 10
GVV +VKP +
Sbjct: 156 GVVVDVKPSK 165




625|Sequence|3121|3130|VKPKQKWKPF

>sp|Y1020_PYRFU|PUTATIVE phosphate permease PF1020|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VKPKQKWKPF 10
VK ++W PF
Sbjct: 178 VKSAKRWSPF 187


>sp|Y640_PYRHO|PUTATIVE phosphate permease PH0640|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VKPKQKWKPF 10
VK ++W PF
Sbjct: 173 VKSAKRWSPF 182


>sp|Y1286_METJA|UNCHARACTERIZED protein MJ1286|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VKPKQKWKP 9
+K K KWKP
Sbjct: 325 IKMKFKWKP 333


>sp|PELO_NITMS|PROTEIN pelota homolog|Nitrosopumilus maritimus (strain SCM1)

Query: 4 KQKWKPF 10
K+KW PF
Sbjct: 111 KKKWLPF 117


>sp|AROA_META3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 VKPKQKWKPF 10
+K QK+KP+
Sbjct: 227 IKGNQKYKPY 236


>sp|PELO_PYRHO|PROTEIN pelota homolog|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 KQKWKPF 10
K++WKP+
Sbjct: 113 KERWKPY 119


>sp|RS4_IGNH4|SMALL ribosomal subunit protein uS4|Ignicoccus hospitalis (strain

Query: 2 KPKQKWKP 9
KP++KW P
Sbjct: 6 KPRKKWSP 13


>sp|NASD_HALMT|ASSIMILATORY ferredoxin-dependent nitrite reductase|Haloferax mediterranei

Query: 4 KQKWKPF 10
KQ W PF
Sbjct: 564 KQSWYPF 570


>sp|RPO10_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus shibatae (strain ATCC

Query: 6 KWKPF 10
KW+PF
Sbjct: 17 KWQPF 21


>sp|RPO10_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 6 KWKPF 10
KW+PF
Sbjct: 17 KWQPF 21


>sp|RPO10_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 6 KWKPF 10
KW+PF
Sbjct: 17 KWQPF 21


>sp|RPO10_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 6 KWKPF 10
KW+PF
Sbjct: 17 KWQPF 21


>sp|RPO10_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 6 KWKPF 10
KW+PF
Sbjct: 17 KWQPF 21


>sp|RPO10_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 6 KWKPF 10
KW+PF
Sbjct: 17 KWQPF 21


>sp|RPO10_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 6 KWKPF 10
KW+PF
Sbjct: 17 KWQPF 21


>sp|RPO10_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo10|Sulfolobus acidocaldarius (strain

Query: 6 KWKPF 10
KW+PF
Sbjct: 17 KWEPF 21


>sp|MRE11_METMP|DNA double-strand break repair protein|Methanococcus maripaludis

Query: 2 KPKQKWKPF 10
K +QK KPF
Sbjct: 89 KSQQKGKPF 97


>sp|RPO10_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo10|Sulfurisphaera tokodaii (strain DSM

Query: 6 KWKPF 10
KW+PF
Sbjct: 17 KWEPF 21


>sp|FAU1_METKA|PROBABLE ribonuclease FAU-1|Methanopyrus kandleri (strain AV19 /

Query: 1 VKPKQKWKPF 10
VKP WK F
Sbjct: 472 VKPYPVWKGF 481


>sp|PTH_HALMA|PEPTIDYL-TRNA hydrolase|Haloarcula marismortui (strain ATCC 43049

Query: 2 KPKQKWK 8
KP++ WK
Sbjct: 36 KPRKAWK 42


>sp|MPTE_PYRFU|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 QKWKPF 10
++WKPF
Sbjct: 4 EEWKPF 9


>sp|PYRC_THEKO|DIHYDROOROTASE kodakarensis (strain ATCC BAA-918

Query: 1 VKPKQKWK 8
+ PK++WK
Sbjct: 346 IDPKKEWK 353


>sp|TRUD_SACS2|PROBABLE tRNA pseudouridine synthase D|Saccharolobus solfataricus (strain

Query: 2 KPKQKWK 8
KP Q WK
Sbjct: 42 KPAQDWK 48


>sp|IDI2_PYRAE|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VKPKQKW 7
VKP+ KW
Sbjct: 99 VKPEVKW 105


>sp|IF2P_METVS|PROBABLE translation initiation factor IF-2|Methanococcus vannielii (strain

Query: 3 PKQKWKP 9
PK K+KP
Sbjct: 294 PKDKFKP 300


>sp|GLPK2_SULAC|GLYCEROL kinase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 KQKWK 8
KQKWK
Sbjct: 456 KQKWK 460


>sp|IF2P_METMP|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 3 PKQKWKP 9
PK K+KP
Sbjct: 294 PKDKFKP 300




626|Sequence|3126|3135|KWKPFSQKQI

>sp|RPO10_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo10|Sulfolobus acidocaldarius (strain

Query: 1 KWKPFSQK 8
KW+PFS +
Sbjct: 17 KWEPFSNR 24


>sp|Y325_METJA|UNCHARACTERIZED protein MJ0325|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WKPFSQKQI 10
W PF QK +
Sbjct: 240 WNPFMQKTV 248


>sp|Y774_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0774|Methanocaldococcus

Query: 1 KWKPFSQKQI 10
K+ PFS+K I
Sbjct: 24 KYNPFSEKPI 33


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 WKPFSQ 7
WKPF Q
Sbjct: 246 WKPFVQ 251


>sp|RPO10_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus shibatae (strain ATCC

Query: 1 KWKPF 5
KW+PF
Sbjct: 17 KWQPF 21


>sp|RPO10_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 1 KWKPF 5
KW+PF
Sbjct: 17 KWQPF 21


>sp|RPO10_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 1 KWKPF 5
KW+PF
Sbjct: 17 KWQPF 21


>sp|RPO10_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 1 KWKPF 5
KW+PF
Sbjct: 17 KWQPF 21


>sp|RPO10_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 1 KWKPF 5
KW+PF
Sbjct: 17 KWQPF 21


>sp|RPO10_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 1 KWKPF 5
KW+PF
Sbjct: 17 KWQPF 21


>sp|RPO10_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 1 KWKPF 5
KW+PF
Sbjct: 17 KWQPF 21


>sp|RPO10_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo10|Sulfurisphaera tokodaii (strain DSM

Query: 1 KWKPF 5
KW+PF
Sbjct: 17 KWEPF 21


>sp|MPTE_PYRFU|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KWKPFSQK 8
+WKPF ++
Sbjct: 5 EWKPFYER 12


>sp|RFCL_METJA|REPLICATION factor C large subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KWKPFSQKQI 10
KW P+S +I
Sbjct: 323 KWTPYSYPKI 332


>sp|Y331_METJA|UNCHARACTERIZED protein MJ0331|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KWKPFSQ 7
KWKP S+
Sbjct: 40 KWKPLSK 46




627|Sequence|3131|3140|SQKQIILLEQ

***** No hits found ******


628|Sequence|3136|3145|ILLEQSYQKH

>sp|PGK_METMP|PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LLEQSYQKH 10
+L +SY+KH
Sbjct: 404 MLSKSYEKH 412


>sp|IF2B_NANEQ|TRANSLATION initiation factor 2 subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 LLEQSYQK 9
LLE++YQK
Sbjct: 8 LLERAYQK 15


>sp|RNH2_THEON|RIBONUCLEASE HII|Thermococcus onnurineus (strain NA1)

Query: 2 LLEQSYQKH 10
LE+ Y+KH
Sbjct: 179 FLEEYYRKH 187


>sp|Y924_METJA|UNCHARACTERIZED ATP-binding protein MJ0924|Methanocaldococcus jannaschii (strain

Query: 2 LLEQSYQK 9
L+EQSY K
Sbjct: 208 LVEQSYAK 215


>sp|RNH2_PYRFU|RIBONUCLEASE HII|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LEQSYQKH 10
LE+ Y+KH
Sbjct: 180 LEEYYKKH 187




629|Sequence|3141|3150|SYQKHQISRD

>sp|RPIA_HALMA|RIBOSE-5-PHOSPHATE isomerase A|Haloarcula marismortui (strain ATCC 43049

Query: 1 SYQKHQISRD 10
S+Q Q++RD
Sbjct: 58 SFQSRQLARD 67


>sp|MTXH_METBF|PUTATIVE methyltransferase mtx subunit H|Methanosarcina barkeri (strain

Query: 2 YQKHQISRD 10
Y KH+I +D
Sbjct: 35 YDKHEIVKD 43


>sp|RL5_METTH|LARGE ribosomal subunit protein uL5|Methanothermobacter

Query: 3 QKHQISRD 10
QKH++SR+
Sbjct: 146 QKHRVSRE 153


>sp|MTXH_METAC|PUTATIVE methyltransferase mtx subunit H|Methanosarcina acetivorans

Query: 2 YQKHQISRD 10
Y KH+I D
Sbjct: 35 YNKHEIVED 43


>sp|CDC6B_HALMA|ORC1-TYPE DNA replication protein 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 SYQKHQISRD 10
+Y++H+++RD
Sbjct: 368 TYRQHELNRD 377




630|Sequence|3146|3155|QISRDHGWIK

>sp|DHE3_THELN|GLUTAMATE dehydrogenase|Thermococcus litoralis (strain ATCC 51850

Query: 1 QISRDHGWIK 10
Q +D GWIK
Sbjct: 409 QAMKDRGWIK 418


>sp|SEPS_METHJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 DHGWIK 10
DHGW++
Sbjct: 291 DHGWVE 296


>sp|ENO_PICTO|ENOLASE torridus (strain ATCC 700027

Query: 2 ISRDHGW 8
ISRDHG+
Sbjct: 264 ISRDHGF 270


>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 2 ISRDHGWI 9
IS +HGWI
Sbjct: 381 ISGEHGWI 388


>sp|PORA_METJA|PYRUVATE synthase subunit PorA|Methanocaldococcus jannaschii (strain ATCC

Query: 4 RDHGWIK 10
RD GWI+
Sbjct: 131 RDSGWIQ 137


>sp|GUAAB_METKA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanopyrus kandleri

Query: 4 RDHGWI 9
RD+GW+
Sbjct: 253 RDYGWV 258


>sp|FER2_HALMA|FERREDOXIN-2 marismortui (strain ATCC 43049

Query: 1 QISRDHGW 8
++ DHGW
Sbjct: 8 EVLEDHGW 15


>sp|FAU1_SULAC|PROBABLE ribonuclease FAU-1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QISRDHGWIK 10
+I RD+ W+K
Sbjct: 290 EIGRDYYWLK 299


>sp|NOB1_ARCFU|ENDORIBONUCLEASE Nob1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QISRDHGWIK 10
QIS++ W+K
Sbjct: 122 QISKEFKWVK 131


>sp|PORA_PYRHO|PYRUVATE synthase subunit PorA|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 RDHGWIK 10
RD GWI+
Sbjct: 128 RDTGWIQ 134


>sp|PORA_PYRAB|PYRUVATE synthase subunit PorA|Pyrococcus abyssi (strain GE5 /

Query: 4 RDHGWIK 10
RD GWI+
Sbjct: 128 RDTGWIQ 134


>sp|DHE3_THEPR|GLUTAMATE dehydrogenase|Thermococcus profundus

Query: 1 QISRDHGWIK 10
Q +D GW+K
Sbjct: 409 QAMKDRGWVK 418


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 1 QISRDHGW 8
++ ++HGW
Sbjct: 766 ELEKEHGW 773


>sp|GUAAB_METB6|GMP synthase [glutamine-hydrolyzing] subunit B|Methanoregula boonei

Query: 3 SRDHGWI 9
+R HGWI
Sbjct: 243 NRIHGWI 249


>sp|GUAAB_METAR|GMP synthase [glutamine-hydrolyzing] subunit B|Methanocella arvoryzae

Query: 3 SRDHGWI 9
+R HGWI
Sbjct: 243 NRCHGWI 249


>sp|SYFA_THESM|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus sibiricus (strain DSM 12597

Query: 3 SRDHGWI 9
S +HGWI
Sbjct: 315 SHEHGWI 321


>sp|YHIT_SACS2|UNCHARACTERIZED HIT-like protein SSO2163|Saccharolobus solfataricus (strain ATCC

Query: 4 RDHGWI 9
RDHG+I
Sbjct: 11 RDHGYI 16


>sp|GLCDH_THEAC|GLUCOSE 1-dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 SRDHGWIK 10
+RD+G+IK
Sbjct: 77 ARDNGYIK 84


>sp|GUAAB_HALLT|GMP synthase [glutamine-hydrolyzing] subunit B|Halorubrum lacusprofundi

Query: 3 SRDHGWI 9
+R HGW+
Sbjct: 243 NRVHGWV 249


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 3 SRDHGWI 9
S +HGWI
Sbjct: 378 SGEHGWI 384


>sp|GUAAB_METBU|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcoides

Query: 4 RDHGWI 9
R HGWI
Sbjct: 243 RVHGWI 248


>sp|DAPB_HALMA|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Haloarcula marismortui (strain ATCC 43049

Query: 2 ISRDHGW 8
+ RD GW
Sbjct: 234 VGRDSGW 240


>sp|PELO_AERPE|PROTEIN pelota homolog|Aeropyrum pernix (strain ATCC 700893

Query: 2 ISRDHGW 8
+ RD GW
Sbjct: 106 VERDKGW 112


>sp|GCSH_THEGJ|PROBABLE glycine cleavage system H|Thermococcus gammatolerans (strain DSM

Query: 3 SRDHGWIK 10
++DH W K
Sbjct: 16 TKDHEWAK 23


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 4 RDHGWIK 10
RDH +IK
Sbjct: 480 RDHNYIK 486


>sp|RS8_METIG|SMALL ribosomal subunit protein uS8|Methanotorris igneus (Methanococcus

Query: 1 QISRDHGWI 9
++ +DHG+I
Sbjct: 39 KVMQDHGYI 47


>sp|GUAAB_NATPD|GMP synthase [glutamine-hydrolyzing] subunit B|Natronomonas pharaonis

Query: 3 SRDHGWI 9
+R HGW+
Sbjct: 243 NRVHGWV 249


>sp|RS8_ARCFU|SMALL ribosomal subunit protein uS8|Archaeoglobus fulgidus (strain ATCC

Query: 1 QISRDHGWIK 10
++ +D+G+IK
Sbjct: 38 KVMKDYGYIK 47


>sp|ARGB_METAR|ACETYLGLUTAMATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 QISRDHGWI 9
+I D+GW+
Sbjct: 150 EIMVDYGWV 158


>sp|SYS2_METBU|TYPE-2 serine--tRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 6 HGWIK 10
HGWIK
Sbjct: 192 HGWIK 196


>sp|RL15_PYRIL|LARGE ribosomal subunit protein uL15|Pyrobaculum islandicum (strain DSM

Query: 3 SRDHGW 8
SR HGW
Sbjct: 15 SRTHGW 20


>sp|RTCB_AERPE|TRNA-SPLICING ligase RtcB|Aeropyrum pernix (strain ATCC 700893

Query: 2 ISRDHGW 8
ISR +GW
Sbjct: 158 ISRGYGW 164


>sp|GUAAB_HALMA|GMP synthase [glutamine-hydrolyzing] subunit B|Haloarcula marismortui

Query: 3 SRDHGWI 9
+R HGW+
Sbjct: 243 NRVHGWV 249


>sp|RL15_THEPD|LARGE ribosomal subunit protein uL15|Thermofilum pendens (strain DSM

Query: 3 SRDHGW 8
SR HGW
Sbjct: 13 SRTHGW 18


>sp|TOP1_AERPE|DNA topoisomerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 SRDHGW 8
+R HGW
Sbjct: 232 ARPHGW 237


>sp|DHE3_PYRAB|GLUTAMATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 QISRDHGWIK 10
Q D GW+K
Sbjct: 410 QAMLDRGWVK 419


>sp|RL15_PYRAR|LARGE ribosomal subunit protein uL15|Pyrobaculum arsenaticum (strain

Query: 3 SRDHGW 8
SR HGW
Sbjct: 15 SRTHGW 20


>sp|DHE3_PYREN|GLUTAMATE dehydrogenase|Pyrococcus endeavori

Query: 1 QISRDHGWIK 10
Q D GW+K
Sbjct: 410 QAMLDRGWVK 419


>sp|DHE3_PYRHR|GLUTAMATE dehydrogenase|Pyrococcus horikoshii

Query: 1 QISRDHGWIK 10
Q D GW+K
Sbjct: 410 QAMLDRGWVK 419


>sp|DHE3_PYRHO|GLUTAMATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QISRDHGWIK 10
Q D GW+K
Sbjct: 410 QAMLDRGWVK 419


>sp|DHE3_PYRFU|GLUTAMATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QISRDHGWIK 10
Q D GW+K
Sbjct: 410 QAMLDRGWVK 419


>sp|GLMM_METBU|PROBABLE phosphoglucosamine mutase|Methanococcoides burtonii (strain DSM

Query: 1 QISRDHGWI 9
++ D+GW+
Sbjct: 388 RVEMDNGWV 396


>sp|GLMM_METBF|PROBABLE phosphoglucosamine mutase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QISRDHGWI 9
++ D+GW+
Sbjct: 389 RVEMDNGWV 397


>sp|RL15_PYRAE|LARGE ribosomal subunit protein uL15|Pyrobaculum aerophilum (strain

Query: 3 SRDHGW 8
SR HGW
Sbjct: 15 SRTHGW 20


>sp|RL15_PYRNV|LARGE ribosomal subunit protein uL15|Pyrobaculum neutrophilum (strain

Query: 3 SRDHGW 8
SR HGW
Sbjct: 15 SRTHGW 20


>sp|RL15_PYRCJ|LARGE ribosomal subunit protein uL15|Pyrobaculum calidifontis (strain

Query: 3 SRDHGW 8
SR HGW
Sbjct: 15 SRTHGW 20




631|Sequence|3151|3160|HGWIKLDNNF

>sp|PYRG_METST|CTP synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 WIKLDNNF 10
WIK DN+F
Sbjct: 330 WIKADNDF 337


>sp|DCD_SULTO|DCTP deaminase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GWIKLD 7
GWIK+D
Sbjct: 15 GWIKID 20


>sp|CBIA_SULTO|COBYRINATE a,c-diamide synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GWIKLDNNF 10
G+IK D NF
Sbjct: 169 GYIKYDRNF 177


>sp|FLA1_SACSH|FLAGELLIN FlaB2|Saccharolobus shibatae (strain ATCC 51178

Query: 3 WIKLDNNF 10
W+K DN+F
Sbjct: 205 WLKNDNSF 212


>sp|GCSH_THEVO|PROBABLE glycine cleavage system H|Thermoplasma volcanium (strain ATCC

Query: 1 HGWIKLDN 8
H W K+DN
Sbjct: 14 HEWYKVDN 21


>sp|Y157_METJA|UNCHARACTERIZED protein MJ0157|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WIKLDNNF 10
W+ LDNN
Sbjct: 38 WVVLDNNL 45


>sp|TDXH_HYPBU|PEROXIREDOXIN butylicus (strain DSM 5456

Query: 1 HGWIKLDNNF 10
HG IKL ++F
Sbjct: 21 HGKIKLPDHF 30


>sp|PUS10_THEAM|TRNA pseudouridine synthase Pus10|Thermosphaera aggregans (strain DSM

Query: 4 IKLDNNF 10
+KLD NF
Sbjct: 194 VKLDENF 200


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 WIKLDNNF 10
W KLDN+
Sbjct: 775 WHKLDNSL 782


>sp|TDXH_PYRFU|PEROXIREDOXIN furiosus (strain ATCC 43587

Query: 1 HGWIKLDNNF 10
HG IKL ++F
Sbjct: 17 HGVIKLPDHF 26


>sp|PHS_SACS2|PUTATIVE pterin-4-alpha-carbinolamine dehydratase|Saccharolobus

Query: 1 HGWIKLDN 8
+GWI L+N
Sbjct: 15 NGWIVLEN 22


>sp|TDXH_PYRAB|PEROXIREDOXIN abyssi (strain GE5 /

Query: 1 HGWIKLDNNF 10
HG IKL ++F
Sbjct: 17 HGVIKLPDHF 26


>sp|C2M5_METJA|PUTATIVE control protein C.MjaVP|Methanocaldococcus jannaschii (strain

Query: 3 WIKLDNNF 10
WI+ NNF
Sbjct: 19 WIQRANNF 26


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 3 WIKLDNNF 10
WIK N F
Sbjct: 1444 WIKYGNKF 1451




632|Sequence|3156|3165|LDNNFEVNFD

>sp|DP2S_PYRAB|DNA polymerase II small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 LDNNFEVNFD 10
++ N+EV FD
Sbjct: 193 IEKNYEVKFD 202


>sp|NAOX_METJA|NADH oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NNFEVNFD 10
N FE+N+D
Sbjct: 98 NEFEMNYD 105


>sp|Y1334_METJA|PUTATIVE UTP--glucose-1-phosphate uridylyltransferase|Methanocaldococcus

Query: 1 LDNNFEVNFD 10
++N+F+VN++
Sbjct: 62 IENHFDVNYE 71


>sp|HYD2G_PYRFU|SULFHYDROGENASE 2 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LDNNFEVNF 9
LDN E NF
Sbjct: 29 LDNEIEENF 37


>sp|Y1828_METM6|UPF0145 protein MmarC6_1828|Methanococcus maripaludis (strain C6 /

Query: 1 LDNNFEVNF 9
L NN ++NF
Sbjct: 103 LKNNIQLNF 111


>sp|AATE_CENSY|A-TYPE ATP synthase subunit E|Cenarchaeum symbiosum (strain A)

Query: 1 LDNNFEVNFD 10
LDN + FD
Sbjct: 171 LDNTIDARFD 180


>sp|RL5_METS3|LARGE ribosomal subunit protein uL5|Methanobrevibacter smithii (strain

Query: 1 LDNNFEVNF 9
+++NF VN+
Sbjct: 159 MEDNFNVNY 167


>sp|MFNA_METST|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosphaera stadtmanae

Query: 3 NNFEVNFD 10
NN ++NFD
Sbjct: 211 NNNQLNFD 218




633|Sequence|3161|3170|EVNFDKDPME

>sp|SYS2_METMP|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EVNFDKDPME 10
E+ FDKDP E
Sbjct: 188 EITFDKDPTE 197


>sp|SYS2_METM6|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 EVNFDKDPME 10
E+ FD DP E
Sbjct: 188 EITFDTDPTE 197


>sp|SYS2_METM5|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 EVNFDKDPME 10
E+ FD DP E
Sbjct: 188 EITFDTDPTE 197


>sp|SYS2_METM7|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 EVNFDKDPME 10
E+ FD DP E
Sbjct: 188 EITFDTDPTE 197


>sp|UPPS_HALMA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Haloarcula

Query: 3 NFDKDPME 10
NFD+DP E
Sbjct: 81 NFDRDPEE 88


>sp|PYRH_METKA|URIDYLATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 4 FDKDPME 10
+DKDP E
Sbjct: 143 YDKDPSE 149


>sp|SYS2_METJA|TYPE-2 serine--tRNA ligase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EVNFDKDP 8
++ FDKDP
Sbjct: 191 KITFDKDP 198


>sp|PYRH_STAMF|URIDYLATE kinase|Staphylothermus marinus (strain ATCC 43588

Query: 4 FDKDPME 10
+DKDP++
Sbjct: 146 YDKDPLK 152


>sp|THYX_THEON|FLAVIN-DEPENDENT thymidylate synthase|Thermococcus onnurineus (strain NA1)

Query: 2 VNFDKDPME 10
VN+ K P+E
Sbjct: 10 VNYTKKPLE 18


>sp|FWDF_METJA|POLYFERREDOXIN protein FwdF|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EVNFDKDP 8
E+NF+++P
Sbjct: 334 EINFEREP 341


>sp|QUEC_SULAC|7-CYANO-7-DEAZAGUANINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EVNFDKDPME 10
EVN KDP+E
Sbjct: 450 EVNGLKDPVE 459


>sp|MTTB1_METMA|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VNFDKDPM 9
VN+ DPM
Sbjct: 428 VNYPSDPM 435


>sp|MTTB2_METAC|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina acetivorans (strain ATCC

Query: 2 VNFDKDPM 9
VN+ DPM
Sbjct: 428 VNYPSDPM 435


>sp|MTTB1_METAC|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina acetivorans (strain ATCC

Query: 2 VNFDKDPM 9
VN+ DPM
Sbjct: 428 VNYPSDPM 435


>sp|THYX_THEKO|FLAVIN-DEPENDENT thymidylate synthase|Thermococcus kodakarensis (strain ATCC

Query: 2 VNFDKDPME 10
VN+ K P+E
Sbjct: 10 VNYTKKPLE 18


>sp|RSMA_METJA|PROBABLE ribosomal RNA small subunit|Methanocaldococcus jannaschii (strain

Query: 1 EVNFDKDPME 10
E+N++KD M+
Sbjct: 220 ELNYNKDEMK 229


>sp|SYW_THEAC|TRYPTOPHAN--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VNFDKDP 8
V FD+DP
Sbjct: 201 VGFDQDP 207


>sp|SYW_THEVO|TRYPTOPHAN--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VNFDKDP 8
V FD+DP
Sbjct: 201 VGFDQDP 207




634|Sequence|3166|3175|KDPMEMRLPI

>sp|COFD_METB6|2-PHOSPHO-L-LACTATE transferase|Methanoregula boonei (strain DSM 21154

Query: 1 KDPMEMRLPI 10
+DP+EMR I
Sbjct: 265 RDPVEMREAI 274


>sp|NTPTH_IGNH4|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 PMEMRLP 9
PME++LP
Sbjct: 103 PMELKLP 109


>sp|FAEHP_METTH|BIFUNCTIONAL enzyme Fae/Hps|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 KDPMEMRLPI 10
+DP MRLP+
Sbjct: 391 QDPDTMRLPL 400


>sp|THIE_CALMQ|THIAMINE-PHOSPHATE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 KDPMEM 6
KDP+EM
Sbjct: 189 KDPLEM 194


>sp|NTPTH_SACS2|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PMEMRLP 9
PME+++P
Sbjct: 114 PMELKIP 120




635|Sequence|3171|3180|MRLPIRSPIK

>sp|Y1715_METAC|UPF0280 protein MA_1715|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 PIRSPIK 10
P+R+PIK
Sbjct: 12 PVRAPIK 18


>sp|PYRG_PYRAE|CTP synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 MRLPIRSP 8
+RLP RSP
Sbjct: 262 LRLPSRSP 269


>sp|SYDND_METMJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 MRLPIRS 7
MRLPIR+
Sbjct: 1 MRLPIRA 7




636|Sequence|3176|3185|RSPIKRDFLS

>sp|BIOD_METVS|ATP-DEPENDENT dethiobiotin synthetase BioD|Methanococcus vannielii (strain ATCC

Query: 3 PIKRDFL 9
PIK+DFL
Sbjct: 113 PIKKDFL 119


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 PIKRDFL 9
PIKRD++
Sbjct: 149 PIKRDYM 155


>sp|ACD_METJA|ACETATE--COA ligase [ADP-forming]|Methanocaldococcus jannaschii (strain ATCC

Query: 2 SPIKRDF 8
SPI RDF
Sbjct: 627 SPITRDF 633


>sp|BIOD_METJA|ATP-DEPENDENT dethiobiotin synthetase BioD|Methanocaldococcus jannaschii (strain

Query: 3 PIKRDFL 9
PIK DFL
Sbjct: 117 PIKEDFL 123


>sp|SYTE_SACS2|THREONINE--TRNA ligase editing subunit|Saccharolobus solfataricus (strain ATCC

Query: 3 PIKRDFL 9
P+K+DFL
Sbjct: 282 PVKKDFL 288


>sp|Y662_METJA|UNCHARACTERIZED protein MJ0662|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 IKRDFL 9
IKRDFL
Sbjct: 85 IKRDFL 90


>sp|COFG_META3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 SPIKRDFLS 10
SPI +DF++
Sbjct: 301 SPITKDFVN 309


>sp|AATE_METLZ|A-TYPE ATP synthase subunit E|Methanocorpusculum labreanum (strain ATCC

Query: 4 IKRDFLS 10
+KRDFL+
Sbjct: 70 VKRDFLN 76


>sp|PUR1_ARCFU|AMIDOPHOSPHORIBOSYLTRANSFERASE fulgidus (strain ATCC 49558

Query: 2 SPIKRDFLS 10
SP++ DF+S
Sbjct: 273 SPVEADFVS 281


>sp|RS19E_THEAC|SMALL ribosomal subunit protein eS19|Thermoplasma acidophilum (strain

Query: 1 RSPIKRDFL 9
+SP+ RD++
Sbjct: 43 KSPVNRDWI 51


>sp|CCA_PYRAE|CCA-ADDING enzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RSPIKRDFLS 10
RSP+ FLS
Sbjct: 137 RSPLHHKFLS 146


>sp|CCA_PYRNV|CCA-ADDING enzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 RSPIKRDFLS 10
RSP+ FLS
Sbjct: 135 RSPLHHKFLS 144


>sp|COFG_METTH|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 SPIKRDFLS 10
SPI RD+++
Sbjct: 263 SPISRDYVN 271




637|Sequence|3181|3190|RDFLSGIQIE

>sp|RIFK_PYRAR|RIBOFLAVIN kinase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 RDFLSGI 7
RDFLSGI
Sbjct: 63 RDFLSGI 69


>sp|TRPD_METVS|ANTHRANILATE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 2 DFLSGIQI 9
DFL G++I
Sbjct: 294 DFLEGVEI 301


>sp|MER_METBF|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 RDFLSGIQI 9
RDF+SG ++
Sbjct: 122 RDFISGKKV 130


>sp|TRPD_METMP|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 2 DFLSGIQI 9
DFL G++I
Sbjct: 294 DFLDGVEI 301


>sp|TRPD_METM7|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 2 DFLSGIQI 9
DFL G++I
Sbjct: 294 DFLDGVEI 301


>sp|TRPD_METM6|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 2 DFLSGIQI 9
DFL G++I
Sbjct: 294 DFLDGVEI 301


>sp|TRPD_METM5|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 2 DFLSGIQI 9
DFL G++I
Sbjct: 294 DFLDGVEI 301




638|Sequence|3186|3195|GIQIEFKQSS

>sp|KATG_METHJ|CATALASE-PEROXIDASE hungatei JF-1 (strain ATCC

Query: 1 GIQIEFKQSS 10
GIQ EF Q++
Sbjct: 513 GIQHEFNQNA 522


>sp|APGM_META3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus aeolicus (strain ATCC

Query: 1 GIQIEFKQS 9
G+++ FKQS
Sbjct: 130 GVEVIFKQS 138


>sp|Y1370_METJA|UPF0285 protein MJ1370|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GIQIEFK 7
GI++EFK
Sbjct: 322 GIEVEFK 328




639|Sequence|3191|3200|FKQSSHQRSL

>sp|LYSJ_SACS2|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Saccharolobus

Query: 1 FKQSSHQRSL 10
FK S H RS+
Sbjct: 120 FKNSFHGRSM 129




640|Sequence|3196|3205|HQRSLRARLY

>sp|SURE_AERPE|5'-NUCLEOTIDASE SurE|Aeropyrum pernix (strain ATCC 700893

Query: 1 HQRSLRA 7
H RSLRA
Sbjct: 13 HSRSLRA 19


>sp|GPMA_METAC|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosarcina acetivorans (strain ATCC

Query: 1 HQRSLRA 7
HQ SLRA
Sbjct: 194 HQNSLRA 200




641|Sequence|3201|3210|RARLYWLQVD

>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 1 RARLYWLQVD 10
R RL+W Q+D
Sbjct: 572 RVRLHWTQID 581


>sp|RTCB_THEKO|TRNA-SPLICING ligase RtcB|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RARLYWLQVD 10
R RL+W Q+D
Sbjct: 138 RVRLHWTQLD 147


>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RARLYWLQVD 10
+ RL+W Q+D
Sbjct: 625 KVRLHWTQID 634


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RARLYWLQVD 10
R +L+W Q+D
Sbjct: 526 RIKLHWTQID 535


>sp|XACC_HALVD|PENTONOLACTONASE XacC|Haloferax volcanii (strain ATCC 29605

Query: 3 RLYWLQVD 10
RLYW+ ++
Sbjct: 25 RLYWVDIE 32


>sp|SAHH_PYRAE|ADENOSYLHOMOCYSTEINASE aerophilum (strain ATCC 51768

Query: 1 RARLYWLQVD 10
R +LYW +++
Sbjct: 16 REQLYWAELN 25


>sp|BAT_HALSA|BACTERIOOPSIN transcriptional activator|Halobacterium salinarum (strain ATCC

Query: 4 LYWLQVD 10
L+W QVD
Sbjct: 245 LFWNQVD 251




642|Sequence|3206|3215|WLQVDNQLPG

>sp|RLME_NATPD|RIBOSOMAL RNA large subunit methyltransferase|Natronomonas pharaonis

Query: 1 WLQVDNQLPG 10
WLQV N+L G
Sbjct: 50 WLQVANELAG 59


>sp|AOCD_METJA|ORNITHINE cyclodeaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WLQVDNQ 7
W++V+NQ
Sbjct: 112 WIEVENQ 118


>sp|Y300_HALMA|UPF0173 metal-dependent hydrolase rrnAC0300|Haloarcula marismortui (strain

Query: 1 WLQVDNQLP 9
WL VD+ P
Sbjct: 191 WLDVDHAFP 199


>sp|Y3368_HALWD|UPF0173 metal-dependent hydrolase HQ_3368A|Haloquadratum walsbyi (strain

Query: 1 WLQVDNQLP 9
WL VD+ P
Sbjct: 189 WLDVDHVFP 197


>sp|RAD50_SULAC|DNA double-strand break repair Rad50|Sulfolobus acidocaldarius (strain

Query: 3 QVDNQLPG 10
Q+DN+L G
Sbjct: 400 QIDNELKG 407


>sp|PRIS_METM5|DNA primase small subunit PriS|Methanococcus maripaludis (strain C5 /

Query: 1 WLQVDNQLP 9
WL++ + LP
Sbjct: 31 WLEIPDDLP 39


>sp|PRIS_METM7|DNA primase small subunit PriS|Methanococcus maripaludis (strain C7 /

Query: 1 WLQVDNQLP 9
WL++ + LP
Sbjct: 31 WLEIPDDLP 39


>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WLQVDNQLPG 10
W QV N PG
Sbjct: 740 WKQVYNLTPG 749


>sp|SYE_METMJ|GLUTAMATE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 WLQVDNQLP 9
WL D +LP
Sbjct: 502 WLPADAKLP 510


>sp|HEM1_METAR|GLUTAMYL-TRNA reductase|Methanocella arvoryzae (strain DSM 22066

Query: 1 WLQVDNQLPG 10
W++ N +PG
Sbjct: 409 WVEESNGIPG 418


>sp|Y2029_AERPE|UPF0284 protein APE_2029.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 WLQVDNQLPG 10
W+ V +PG
Sbjct: 156 WIAVGESIPG 165




643|Sequence|3211|3220|NQLPGAMFPV

>sp|Y538_METJA|UNCHARACTERIZED protein MJ0538|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NQLPGAMF 8
N+L GAMF
Sbjct: 243 NELSGAMF 250


>sp|ATGT_METKA|TRNA-GUANINE(15) transglycosylase|Methanopyrus kandleri (strain AV19 /

Query: 2 QLPGAMFPV 10
+LP A++PV
Sbjct: 182 ELPAAVYPV 190


>sp|RIBB_METLZ|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanocorpusculum labreanum (strain ATCC

Query: 4 PGAMFPV 10
PG MFP+
Sbjct: 124 PGHMFPL 130




644|Sequence|3216|3225|AMFPVVFHPV

>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 2 MFPVVFHP 9
MFP V HP
Sbjct: 108 MFPCVDHP 115


>sp|TRF3_THEVO|TRICORN protease-interacting factor F3|Thermoplasma volcanium (strain ATCC

Query: 2 MFPVVFHP 9
MFP + HP
Sbjct: 109 MFPCIDHP 116


>sp|Y1363_ARCFU|UNCHARACTERIZED protein AF_1363|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 MFPVVFHPV 10
MFP +FH +
Sbjct: 11 MFPNLFHEI 19


>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 MFPVVFHPV 10
MFP +F PV
Sbjct: 627 MFPGLFRPV 635


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FPVVFHPV 10
+PV HP+
Sbjct: 86 YPVFIHPI 93


>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 2 MFPVVFHP 9
M P+V HP
Sbjct: 652 MLPLVSHP 659


>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 MFPVVFHP 9
M P+V HP
Sbjct: 649 MLPLVSHP 656


>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 MFPVVFHP 9
M P+V HP
Sbjct: 649 MLPLVSHP 656


>sp|PYRC_THEAC|DIHYDROOROTASE acidophilum (strain ATCC 25905

Query: 3 FPVVFH 8
+PVVFH
Sbjct: 166 YPVVFH 171


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 2 MFPVVFHP 9
M P+V HP
Sbjct: 1026 MIPLVTHP 1033


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 MFPVVFH 8
+FP+ FH
Sbjct: 74 LFPMAFH 80


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 MFPVVFH 8
+FP+ FH
Sbjct: 68 LFPMAFH 74


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 MFPVVFH 8
+FP+ FH
Sbjct: 68 LFPMAFH 74


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 MFPVVFH 8
+FP+ FH
Sbjct: 77 LFPMAFH 83


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 MFPVVFH 8
+FP+ FH
Sbjct: 67 LFPMAFH 73


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 MFPVVFH 8
+FP+ FH
Sbjct: 75 LFPMAFH 81


>sp|SYL_PYRAR|LEUCINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 MFPVVFH 8
+FP+ FH
Sbjct: 75 LFPMAFH 81




645|Sequence|3221|3230|VFHPVAPPKS

>sp|Y987_METTH|UNCHARACTERIZED protein MTH_987|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 VFHPVAPPK 9
VFHP PP+
Sbjct: 137 VFHPYNPPE 145


>sp|SYC_AERPE|CYSTEINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VFHPVAPP 8
VF+P +PP
Sbjct: 14 VFNPYSPP 21


>sp|Y2601_AERPE|UNCHARACTERIZED protein APE_2601.1|Aeropyrum pernix (strain ATCC 700893

Query: 3 HPVAPP 8
HPV PP
Sbjct: 116 HPVKPP 121


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VFHPVAP 7
+ HP+AP
Sbjct: 696 ILHPIAP 702


>sp|NURA_PYRFU|DNA double-strand break repair nuclease|Pyrococcus furiosus (strain

Query: 3 HPVAPPK 9
H V PPK
Sbjct: 338 HAVVPPK 344


>sp|NUCS1_HALSA|ENDONUCLEASE NucS 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 FHPVAPPKS 10
F PV+PP S
Sbjct: 229 FSPVSPPGS 237


>sp|SYS_PYRNV|SERINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 FHPVAPP 8
F PV PP
Sbjct: 205 FRPVVPP 211


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VFHPVAP 7
+ HP+AP
Sbjct: 722 LLHPIAP 728


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 2 FHPVAPPKS 10
+ +APPKS
Sbjct: 231 YTEIAPPKS 239


>sp|FTTA_PYRAB|TRANSCRIPTION termination factor FttA|Pyrococcus abyssi (strain GE5 /

Query: 1 VFHPVAPPK 9
+FHPVA K
Sbjct: 493 IFHPVANSK 501


>sp|SYS_PYRAE|SERINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 FHPVAPP 8
F PV PP
Sbjct: 207 FRPVIPP 213


>sp|DPCKG_PYRAE|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 FHPVAPPKS 10
F +APPKS
Sbjct: 99 FIKLAPPKS 107


>sp|FTTA_PYRHO|TRANSCRIPTION termination factor FttA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VFHPVA 6
+FHPVA
Sbjct: 496 IFHPVA 501


>sp|SYS_PYRCJ|SERINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 FHPVAPP 8
F PV PP
Sbjct: 207 FRPVIPP 213


>sp|SP5G_ARCFU|PUTATIVE septation protein SpoVG|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VFHPVA 6
VFHPV+
Sbjct: 61 VFHPVS 66


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 HPVAPP 8
HP+ PP
Sbjct: 458 HPLVPP 463


>sp|RL3_PYRAE|LARGE ribosomal subunit protein uL3|Pyrobaculum aerophilum (strain ATCC

Query: 3 HPVAPPKS 10
HPV PP+
Sbjct: 314 HPVRPPRK 321




646|Sequence|3226|3235|APPKSIALDS

>sp|DPCKG_PYRAE|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 APPKSI 6
APPKSI
Sbjct: 103 APPKSI 108


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 2 PPKSIAL 8
PPKS+A
Sbjct: 375 PPKSVAF 381


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PPKSIALDS 10
PP I++DS
Sbjct: 48 PPTKISIDS 56


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 APPKSIALDS 10
+PP +A+DS
Sbjct: 47 SPPVKVAVDS 56




647|Sequence|3231|3240|IALDSEPKPF

>sp|TMCA_HALMA|TRNA(MET) cytidine acetyltransferase TmcA|Haloarcula marismortui (strain ATCC

Query: 3 LDSEPKPF 10
LD+ PKPF
Sbjct: 690 LDTNPKPF 697


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 ALDSEPKP 9
ALD+E KP
Sbjct: 550 ALDAEKKP 557


>sp|COMC_METTH|L-SULFOLACTATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 IALDSEPKP 9
+ALD+E KP
Sbjct: 198 VALDAEGKP 206


>sp|BTUFA_HALSA|COBALAMIN-BINDING protein|Halobacterium salinarum (strain ATCC 700922

Query: 1 IALDSEPK 8
I LDSEP+
Sbjct: 54 ITLDSEPE 61


>sp|BTUFA_HALS3|COBALAMIN-BINDING protein|Halobacterium salinarum (strain ATCC 29341

Query: 1 IALDSEPK 8
I LDSEP+
Sbjct: 54 ITLDSEPE 61


>sp|CMR6_SACS2|CRISPR system CMR subunit Cmr6|Saccharolobus solfataricus (strain ATCC

Query: 4 DSEPKP 9
D+EPKP
Sbjct: 220 DAEPKP 225




648|Sequence|3236|3245|EPKPFIDVSV

>sp|RKD4_PYRCJ|ARCADIN-4 calidifontis (strain DSM 21063

Query: 1 EPKPFIDVSV 10
EP P++DV+V
Sbjct: 730 EPIPYVDVNV 739


>sp|MCH_METB6|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanoregula boonei (strain DSM 21154

Query: 2 PKPFIDVS 9
P+PFIDV+
Sbjct: 74 PQPFIDVN 81


>sp|RAD50_ARCFU|DNA double-strand break repair Rad50|Archaeoglobus fulgidus (strain

Query: 1 EPKPFID 7
EP PF+D
Sbjct: 825 EPTPFLD 831


>sp|RAD50_PYRHO|DNA double-strand break repair Rad50|Pyrococcus horikoshii (strain ATCC

Query: 1 EPKPFID 7
EP PF+D
Sbjct: 820 EPTPFLD 826


>sp|RL1_ARCFU|LARGE ribosomal subunit protein uL1|Archaeoglobus fulgidus (strain ATCC

Query: 1 EPKPFID 7
+PKPFID
Sbjct: 141 DPKPFID 147


>sp|RAD50_PYRAB|DNA double-strand break repair Rad50|Pyrococcus abyssi (strain GE5 /

Query: 1 EPKPFID 7
EP PF+D
Sbjct: 821 EPTPFLD 827


>sp|TRM1_METHJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanospirillum hungatei

Query: 2 PKPFIDVSV 10
P PFID ++
Sbjct: 129 PAPFIDAAI 137


>sp|MCH_METPE|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 PKPFIDVSV 10
P PFIDV+
Sbjct: 74 PMPFIDVNT 82


>sp|IF2P_CALMQ|PROBABLE translation initiation factor IF-2|Caldivirga maquilingensis

Query: 1 EPKPFID 7
+PKP+ID
Sbjct: 333 DPKPYID 339


>sp|MCH_METHJ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PKPFIDVS 9
P PFI+VS
Sbjct: 74 PMPFIEVS 81


>sp|TMCA_AERPE|TRNA(MET) cytidine acetyltransferase TmcA|Aeropyrum pernix (strain ATCC

Query: 2 PKPFIDVSV 10
PKPFI++ +
Sbjct: 351 PKPFIELEL 359


>sp|SAT_CENSY|SULFATE adenylyltransferase|Cenarchaeum symbiosum (strain A)

Query: 2 PKPFID 7
P+PFID
Sbjct: 374 PRPFID 379


>sp|SAT_NITMS|SULFATE adenylyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 EPKPFID 7
PKPF+D
Sbjct: 374 HPKPFVD 380


>sp|AATD_SACI7|A-TYPE ATP synthase subunit D|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 PKPFIDV 8
PKPF DV
Sbjct: 114 PKPFSDV 120


>sp|AATD_SACI6|A-TYPE ATP synthase subunit D|Saccharolobus islandicus (strain M.16.4 /

Query: 2 PKPFIDV 8
PKPF DV
Sbjct: 114 PKPFSDV 120


>sp|AATD_SACI4|A-TYPE ATP synthase subunit D|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PKPFIDV 8
PKPF DV
Sbjct: 114 PKPFSDV 120


>sp|AATD_SACI3|A-TYPE ATP synthase subunit D|Saccharolobus islandicus (strain M.16.27)

Query: 2 PKPFIDV 8
PKPF DV
Sbjct: 114 PKPFSDV 120


>sp|AATD_SACI2|A-TYPE ATP synthase subunit D|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 PKPFIDV 8
PKPF DV
Sbjct: 114 PKPFSDV 120


>sp|MRE11_PYRFU|DNA double-strand break repair protein|Pyrococcus furiosus (strain ATCC

Query: 3 KPFIDVSV 10
+PFIDV +
Sbjct: 271 RPFIDVKI 278


>sp|Y780_METJA|UNCHARACTERIZED protein MJ0780|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EPKPFIDV 8
EP+ F+D+
Sbjct: 50 EPEEFVDI 57


>sp|TRM1_AERPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Aeropyrum pernix (strain

Query: 2 PKPFIDVSV 10
P PF+D ++
Sbjct: 155 PAPFVDAAL 163


>sp|Y796_METKA|UPF0288 protein MK0796|Methanopyrus kandleri (strain AV19 /

Query: 1 EPKPFIDV 8
EP+PF D+
Sbjct: 241 EPRPFYDL 248


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 1 EPKPFIDVSV 10
+P+P++++ +
Sbjct: 37 DPRPYVEIPI 46


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 EPKPFIDVSV 10
EP+ F D++V
Sbjct: 728 EPRTFYDLTV 737


>sp|TRM1_METKA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanopyrus kandleri

Query: 2 PKPFIDVSV 10
P PF+D +V
Sbjct: 133 PVPFLDAAV 141


>sp|GUAAB_METJA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanocaldococcus

Query: 1 EPKPFIDVSV 10
+PK FID +V
Sbjct: 3 DPKKFIDEAV 12


>sp|MCH_METM5|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C5 /

Query: 3 KPFIDV 8
KPF+DV
Sbjct: 267 KPFLDV 272


>sp|MCH_METMJ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PKPFIDVSV 10
P PFI+VS
Sbjct: 74 PIPFIEVST 82


>sp|CPGS_METS3|CYCLIC 2,3-diphosphoglycerate synthetase|Methanobrevibacter smithii

Query: 2 PKPFIDVS 9
PKP D+S
Sbjct: 336 PKPLADIS 343


>sp|AROA_METJA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocaldococcus jannaschii (strain

Query: 3 KPFIDVSV 10
KP+ID+++
Sbjct: 197 KPYIDITL 204


>sp|NADK_METPE|NAD kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 EPKPFIDVS 9
EP FIDV+
Sbjct: 248 EPAQFIDVN 256


>sp|MCH_METMP|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 3 KPFIDV 8
KPF+DV
Sbjct: 267 KPFLDV 272


>sp|Y3515_METJA|UNCHARACTERIZED ATP-binding protein MJECL15|Methanocaldococcus jannaschii (strain

Query: 2 PKPFID 7
PKPF D
Sbjct: 116 PKPFFD 121


>sp|GLCD1_CALMQ|GLUCOSE 1-dehydrogenase 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 PKPFIDVSV 10
PK IDV+V
Sbjct: 135 PKELIDVAV 143




649|Sequence|3241|3250|IDVSVITRFN

>sp|SYT_METB6|THREONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 IDVSVITRFN 10
IDV TRFN
Sbjct: 437 IDVESSTRFN 446


>sp|PSB_THEAC|PROTEASOME subunit beta|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IDVSVITR 8
IDV+VITR
Sbjct: 181 IDVAVITR 188


>sp|PSB1_PYRAE|PROTEASOME subunit beta 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IDVSVITR 8
IDV VITR
Sbjct: 176 IDVVVITR 183


>sp|PSB_THEVO|PROTEASOME subunit beta|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IDVSVITR 8
IDV+VIT+
Sbjct: 181 IDVAVITK 188




650|Sequence|3246|3255|ITRFNEYSKV

>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 1 ITRFNEYSKV 10
+TR+NE +KV
Sbjct: 283 VTRYNEAAKV 292


>sp|COBQ_METMA|PROBABLE cobyric acid synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TRFNEYSK 9
TRF EY K
Sbjct: 361 TRFGEYKK 368


>sp|DAPA_METMP|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 4 FNEYSKV 10
FNEYS +
Sbjct: 150 FNEYSNI 156


>sp|PFDA_PYRIL|PREFOLDIN subunit alpha|Pyrobaculum islandicum (strain DSM 4184

Query: 3 RFNEYSKV 10
R +EYSKV
Sbjct: 97 RIDEYSKV 104


>sp|KTHY_STAMF|PROBABLE thymidylate kinase|Staphylothermus marinus (strain ATCC 43588

Query: 2 TRFNEYSKV 10
TRF EY K+
Sbjct: 146 TRFPEYEKL 154


>sp|RIBL_METIM|FAD synthase|Methanocaldococcus infernus (strain DSM 11812

Query: 1 ITRFNEYSK 9
I RFN+Y K
Sbjct: 116 IVRFNKYIK 124


>sp|PFDA_PYRCJ|PREFOLDIN subunit alpha|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 RFNEYSKV 10
R EYSKV
Sbjct: 99 RLEEYSKV 106


>sp|COBQ_METAC|PROBABLE cobyric acid synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TRFNEYSK 9
T+F EY K
Sbjct: 361 TKFGEYKK 368


>sp|COBQ_ARCFU|PROBABLE cobyric acid synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ITRFNEYSK 9
+T F EY K
Sbjct: 352 VTEFREYRK 360


>sp|COBQ_METBF|PROBABLE cobyric acid synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 TRFNEYSK 9
T+F EY K
Sbjct: 361 TKFGEYKK 368


>sp|CS12F_MICX1|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f2|Micrarchaeota archaeon (strain

Query: 4 FNEYSKV 10
FNEY+K
Sbjct: 29 FNEYAKA 35




651|Sequence|3251|3260|EYSKVLQFKY

>sp|LIPA_METAR|LIPOYL synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 EYSKVLQFKY 10
EY + L FKY
Sbjct: 260 EYGRSLGFKY 269


>sp|FAEHP_METMJ|BIFUNCTIONAL enzyme Fae/Hps|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 EYSKVLQFKY 10
+Y+K+ +F Y
Sbjct: 121 DYNKIYRFNY 130




652|Sequence|3256|3265|LQFKYFMVLI

>sp|NREB_ARCFU|DNA repair protein NreB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LQFKYFMVL 9
L+F+Y M+L
Sbjct: 82 LEFRYSMIL 90


>sp|PRIS_METAC|DNA primase small subunit PriS|Methanosarcina acetivorans (strain ATCC

Query: 1 LQFKYF 6
L+FKYF
Sbjct: 179 LEFKYF 184


>sp|SYG_PYRFU|GLYCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FKYFMVLI 10
F Y+MV+I
Sbjct: 270 FAYYMVMI 277


>sp|SYG_PYRHO|GLYCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 FKYFMVLI 10
F Y+MV+I
Sbjct: 272 FAYYMVMI 279




653|Sequence|3261|3270|FMVLIQEMAL

***** No hits found ******


654|Sequence|3266|3275|QEMALKIDQG

>sp|COAD_ARCFU|PHOSPHOPANTETHEINE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EMALKIDQ 9
EMALKI+Q
Sbjct: 98 EMALKINQ 105


>sp|KDGA_PICTO|2-DEHYDRO-3-DEOXY-D-GLUCONATE/2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE aldolase|Picrophilus torridus (strain ATCC 700027

Query: 1 QEMALKIDQ 9
+EMALKI++
Sbjct: 214 REMALKIEK 222


>sp|DCDA_ARCFU|DIAMINOPIMELATE decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EMALKID 8
EMALK+D
Sbjct: 178 EMALKLD 184




655|Sequence|3271|3280|KIDQGFLGAI

>sp|DCDB_METPE|DCTP deaminase, dUMP-forming|Methanosphaerula palustris (strain ATCC

Query: 2 IDQGFLGAI 10
ID GF+G+I
Sbjct: 116 IDAGFIGSI 124


>sp|RS24_METTH|SMALL ribosomal subunit protein eS24|Methanothermobacter

Query: 1 KIDQGF 6
KIDQGF
Sbjct: 55 KIDQGF 60


>sp|Y1279_METJA|UNCHARACTERIZED protein MJ1279|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IDQGFLGAI 10
ID+ FLGAI
Sbjct: 29 IDEVFLGAI 37


>sp|LEUC_PYRHO|3-ISOPROPYLMALATE dehydratase large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KIDQGFLGA 9
KIDQ F+G+
Sbjct: 253 KIDQVFIGS 261


>sp|LEUC1_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus abyssi (strain GE5 /

Query: 1 KIDQGFLGA 9
KIDQ F+G+
Sbjct: 293 KIDQVFIGS 301


>sp|LEUC2_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KIDQGFLGA 9
KIDQ F+G+
Sbjct: 253 KIDQVFIGS 261


>sp|DCDB_METHJ|DCTP deaminase, dUMP-forming|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 IDQGFLGAI 10
ID GF G+I
Sbjct: 116 IDAGFAGSI 124


>sp|LEUC2_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 1 KIDQGFLGA 9
KIDQ F+G+
Sbjct: 253 KIDQVFIGS 261


>sp|LEUC_METTH|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanothermobacter

Query: 1 KIDQGFLGA 9
+IDQ FLG+
Sbjct: 290 EIDQVFLGS 298


>sp|LEUC_THEKO|3-ISOPROPYLMALATE dehydratase large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 KIDQGFLGA 9
KIDQ F+G+
Sbjct: 253 KIDQVFIGS 261


>sp|DCDB_METB6|DCTP deaminase, dUMP-forming|Methanoregula boonei (strain DSM 21154

Query: 2 IDQGFLGAI 10
ID GF G+I
Sbjct: 116 IDAGFRGSI 124


>sp|ARLY_PYRFU|ARGININOSUCCINATE lyase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IDQGFLGAI 10
+D+G++G I
Sbjct: 201 LDRGYMGGI 209


>sp|LEUC_METAC|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina

Query: 1 KIDQGFLGA 9
K+DQ F+G+
Sbjct: 292 KLDQVFMGS 300


>sp|PYRDB_METAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanosarcina acetivorans

Query: 1 KIDQGFLGAI 10
K+D GFL A+
Sbjct: 69 KLDCGFLNAM 78




656|Sequence|3276|3285|FLGAIIALFT

>sp|DPCKG_PYRAE|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FLGAIIAL 8
+LGA+IAL
Sbjct: 114 YLGALIAL 121


>sp|Y1279_METJA|UNCHARACTERIZED protein MJ1279|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FLGAIIALFT 10
FLGAII T
Sbjct: 33 FLGAIITTLT 42




657|Sequence|3281|3290|IALFTPTTDP

>sp|RRP4_THEAM|EXOSOME complex component Rrp4|Thermosphaera aggregans (strain DSM 11486

Query: 1 IALFTPTTDP 10
IALF T DP
Sbjct: 132 IALFDRTRDP 141


>sp|SYM_PICTO|METHIONINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 LFTPTTDP 10
+FT TTDP
Sbjct: 92 IFTRTTDP 99


>sp|CBIA_METAC|COBYRINATE a,c-diamide synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IALFTPTTDP 10
I F+P DP
Sbjct: 300 IVYFSPVNDP 309


>sp|IF5A_NANEQ|TRANSLATION initiation factor 5A|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 IALFTPTTDP 10
I + PT+DP
Sbjct: 57 IVIIKPTSDP 66


>sp|BACS2_NATPH|SENSORY rhodopsin-2|Natronomonas pharaonis (Natronobacterium pharaonis)

Query: 1 IALFTPTTD 9
+AL TPT D
Sbjct: 185 VALLTPTVD 193


>sp|COMC_METFV|L-SULFOLACTATE dehydrogenase|Methanothermus fervidus (strain ATCC 43054

Query: 6 PTTDP 10
PTTDP
Sbjct: 206 PTTDP 210


>sp|COMC_METJA|L-SULFOLACTATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 PTTDP 10
PTTDP
Sbjct: 206 PTTDP 210


>sp|GATD_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina mazei (strain ATCC

Query: 1 IALFTPTTDP 10
I FTP DP
Sbjct: 301 IVKFTPGADP 310


>sp|Y3405_METJA|UNCHARACTERIZED protein MJECS05|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ALFTPTTDP 10
A+FTP T P
Sbjct: 34 AIFTPQTYP 42


>sp|UPP_SACI7|URACIL phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 1 IALFTPTTDP 10
I LFT T DP
Sbjct: 186 IYLFTVTIDP 195


>sp|UPP_SACI4|URACIL phosphoribosyltransferase|Saccharolobus islandicus (strain M.14.25

Query: 1 IALFTPTTDP 10
I LFT T DP
Sbjct: 186 IYLFTVTIDP 195


>sp|UPP_SACI3|URACIL phosphoribosyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 IALFTPTTDP 10
I LFT T DP
Sbjct: 186 IYLFTVTIDP 195


>sp|UPP_SACI2|URACIL phosphoribosyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 IALFTPTTDP 10
I LFT T DP
Sbjct: 186 IYLFTVTIDP 195


>sp|UPP_SACI1|URACIL phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 1 IALFTPTTDP 10
I LFT T DP
Sbjct: 186 IYLFTVTIDP 195


>sp|UPP_SACI6|URACIL phosphoribosyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IALFTPTTDP 10
I LFT T DP
Sbjct: 186 IYLFTVTIDP 195


>sp|COMC_METTH|L-SULFOLACTATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 6 PTTDP 10
PTTDP
Sbjct: 206 PTTDP 210


>sp|GCH3_PYRIL|GTP cyclohydrolase III|Pyrobaculum islandicum (strain DSM 4184

Query: 2 ALFTPTTD 9
ALF PT D
Sbjct: 165 ALFLPTPD 172




658|Sequence|3286|3295|PTTDPEAERR

>sp|SYFB_THEPD|PHENYLALANINE--TRNA ligase beta subunit|Thermofilum pendens (strain DSM 2475

Query: 2 TTDPEAERR 10
+TDPEA RR
Sbjct: 229 STDPEAGRR 237


>sp|GUAAB_METAR|GMP synthase [glutamine-hydrolyzing] subunit B|Methanocella arvoryzae

Query: 2 TTDPEAERR 10
TDPEA+R+
Sbjct: 92 VTDPEAKRK 100


>sp|DCUP_THEAC|UROPORPHYRINOGEN decarboxylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PTTDPEAERR 10
P+TDPE +R
Sbjct: 314 PSTDPEKLKR 323


>sp|Y1031_SACS2|UNCHARACTERIZED solute-binding protein SSO1031|Saccharolobus solfataricus (strain

Query: 1 PTTDPEA 7
P TDPE
Sbjct: 217 PNTDPEG 223


>sp|COMC_METTH|L-SULFOLACTATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PTTDPE 6
PTTDPE
Sbjct: 206 PTTDPE 211


>sp|PORA_METJA|PYRUVATE synthase subunit PorA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PTTDPEAER 9
P T P+AER
Sbjct: 181 PVTIPKAER 189


>sp|PROB_NATPD|GLUTAMATE 5-kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PTTDPEAER 9
P DP+AER
Sbjct: 200 PKEDPDAER 208


>sp|DHQS_METPE|3-DEHYDROQUINATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 TTDPEAER 9
TTDPE R
Sbjct: 129 TTDPEVIR 136


>sp|RS4_METKA|SMALL ribosomal subunit protein uS4|Methanopyrus kandleri (strain AV19

Query: 3 TDPEAER 9
TDPEA+R
Sbjct: 62 TDPEAQR 68


>sp|PYRH_NATPD|URIDYLATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PTTDPEAER 9
P DP AER
Sbjct: 150 PNEDPSAER 158


>sp|COMC_METFV|L-SULFOLACTATE dehydrogenase|Methanothermus fervidus (strain ATCC 43054

Query: 1 PTTDP 5
PTTDP
Sbjct: 206 PTTDP 210


>sp|PURL_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloquadratum walsbyi (strain DSM 16790

Query: 2 TTDPEAERR 10
TTDP+A R
Sbjct: 662 TTDPDAVRH 670


>sp|PURL_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Natronomonas pharaonis (strain ATCC 35678

Query: 2 TTDPEAER 9
TTDPEA +
Sbjct: 657 TTDPEAVK 664


>sp|DPO4_METMJ|DNA polymerase IV|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 TTDPEAERR 10
T+DPE RR
Sbjct: 312 TSDPETIRR 320


>sp|SYE_NITMS|GLUTAMATE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 TDPEAER 9
T+PEAER
Sbjct: 142 TNPEAER 148




659|Sequence|3291|3300|EAERRRTKLI

>sp|COOS_METJA|CARBON monoxide dehydrogenase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 AERRRTKLI 10
AE+ +TKLI
Sbjct: 345 AEKTKTKLI 353


>sp|IF2P_SACS2|PROBABLE translation initiation factor IF-2|Saccharolobus solfataricus

Query: 1 EAERRRT 7
EAE+RRT
Sbjct: 455 EAEKRRT 461




660|Sequence|3296|3305|RTKLIQQDID

>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RTKLIQQDID 10
RT+LI+Q +D
Sbjct: 1189 RTRLIEQYMD 1198


>sp|TOP6B_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RTKLIQQDID 10
R KLI D+D
Sbjct: 297 REKLINGDVD 306


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RTKLIQQDI 9
R KLI++DI
Sbjct: 777 RLKLIERDI 785


>sp|GUAAA_THEAC|GMP synthase [glutamine-hydrolyzing] subunit A|Thermoplasma

Query: 2 TKLIQQDID 10
TK++ DID
Sbjct: 28 TKIVPNDID 36




661|Sequence|3301|3310|QQDIDALNAE

>sp|Y550_METJA|UNCHARACTERIZED protein MJ0550|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QDIDALNAE 10
QDI+ LN E
Sbjct: 328 QDINVLNVE 336




662|Sequence|3306|3315|ALNAELMETS

>sp|Y480_METJA|UNCHARACTERIZED protein MJ0480|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LNAELMETS 10
LNAELM+ S
Sbjct: 91 LNAELMKMS 99


>sp|NADK_METAC|NAD kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LNAELMETS 10
LN E++ET+
Sbjct: 126 LNGEMLETA 134


>sp|NADK_METBF|NAD kinase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LNAELMETS 10
LN E++ET+
Sbjct: 126 LNGEMLETA 134


>sp|NADK_METMA|NAD kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LNAELMETS 10
LN E++ET+
Sbjct: 140 LNGEMLETA 148




663|Sequence|3311|3320|LMETSMTDMS

***** No hits found ******


664|Sequence|3316|3325|MTDMSILSFF

***** No hits found ******


665|Sequence|3321|3330|ILSFFEHFHI

>sp|COFC_METTH|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 3 SFFEHFH 9
SFFEH H
Sbjct: 152 SFFEHIH 158


>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 1 ILSFFEHFH 9
+L FEHF+
Sbjct: 231 VLKIFEHFY 239


>sp|IPYR_SULAC|INORGANIC pyrophosphatase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ILSFFEHF 8
I+ FFEH+
Sbjct: 131 IVHFFEHY 138


>sp|IPYR_SACS2|INORGANIC pyrophosphatase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ILSFFEHF 8
I+ FFEH+
Sbjct: 131 IVHFFEHY 138


>sp|Y1275_METVS|UNCHARACTERIZED protein Mevan_1275|Methanococcus vannielii (strain ATCC 35089

Query: 1 ILSFFEHFH 9
ILS EH H
Sbjct: 64 ILSIIEHVH 72


>sp|PYRB_META3|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus aeolicus

Query: 2 LSFFEHFHI 10
LSFFE+ I
Sbjct: 173 LSFFENIEI 181


>sp|SYK_METMJ|LYSINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 FFEHF 8
FFEHF
Sbjct: 363 FFEHF 367


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 LSFFEHFHI 10
LSFF + HI
Sbjct: 617 LSFFIYHHI 625


>sp|MTAD1_ARCFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LSFFEHFHI 10
+ F HFH+
Sbjct: 194 MDIFMHFHL 202




666|Sequence|3326|3335|EHFHISPVKL

>sp|TOP6A_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EHFHISP 7
EHFHI P
Sbjct: 129 EHFHIRP 135


>sp|CYDK_THEKO|CYTIDINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 FHISPV 8
FHISP+
Sbjct: 118 FHISPI 123


>sp|PYRC_PYRFU|DIHYDROOROTASE furiosus (strain ATCC 43587

Query: 1 EHFHISPVKL 10
E HI+P+K+
Sbjct: 314 EKMHINPIKI 323


>sp|TRPE_ARCFU|ANTHRANILATE synthase component 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EHFHISPVKL 10
+H +++PVKL
Sbjct: 3 KHEYVNPVKL 12


>sp|METK_METBU|S-ADENOSYLMETHIONINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EHFHISPVK 9
EH H +P++
Sbjct: 8 EHLHETPIE 16


>sp|GVPC_HALMT|GAS vesicle protein C|Haloferax mediterranei (strain ATCC 33500

Query: 1 EHFHIS 6
EHFH S
Sbjct: 74 EHFHTS 79


>sp|NIKR_METKA|PUTATIVE nickel-responsive regulator|Methanopyrus kandleri (strain AV19 /

Query: 2 HFHISPVK 9
H H+SP K
Sbjct: 94 HIHVSPEK 101


>sp|HELS_ARCFU|ATP-DEPENDENT DNA helicase Hel308|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EHFHISPVKL 10
E H++P KL
Sbjct: 470 EDHHLAPTKL 479


>sp|PRIS_METBU|DNA primase small subunit PriS|Methanococcoides burtonii (strain DSM

Query: 2 HFHIS 6
HFHIS
Sbjct: 151 HFHIS 155


>sp|RL2_DESA1|LARGE ribosomal subunit protein uL2|Desulfurococcus amylolyticus

Query: 1 EHFHISPVK 9
+H H++P +
Sbjct: 21 DHIHVAPAR 29


>sp|PRIS_METMA|DNA primase small subunit PriS|Methanosarcina mazei (strain ATCC

Query: 2 HFHISPVKL 10
HFHI+ K+
Sbjct: 151 HFHITSPKV 159


>sp|QOXM_SULAC|QUINOL oxidase subunit 1/3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EHFHISPVKL 10
+ F I PVKL
Sbjct: 494 QDFFIKPVKL 503




667|Sequence|3331|3340|SPVKLHLSLS

>sp|PCNA_HALMA|DNA polymerase sliding clamp|Haloarcula marismortui (strain ATCC 43049

Query: 2 PVKLHLSLS 10
PVK+H S +
Sbjct: 222 PVKMHFSFA 230


>sp|PCNA_HALSA|DNA polymerase sliding clamp|Halobacterium salinarum (strain ATCC

Query: 2 PVKLHLSLS 10
P+KLH ++
Sbjct: 222 PIKLHFDIA 230


>sp|PCNA_HALS3|DNA polymerase sliding clamp|Halobacterium salinarum (strain ATCC 29341

Query: 2 PVKLHLSLS 10
P+KLH ++
Sbjct: 222 PIKLHFDIA 230


>sp|MCRC_METJA|METHYL-COENZYME M reductase I operon|Methanocaldococcus jannaschii (strain ATCC

Query: 3 VKLHLSLS 10
+KLHL+L+
Sbjct: 193 IKLHLNLN 200




668|Sequence|3336|3345|HLSLSLGSGG

>sp|UPPS_PYRAE|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Pyrobaculum

Query: 1 HLSLSLGSGG 10
HL+++LG GG
Sbjct: 133 HLTIALGYGG 142


>sp|HMGCS_PYRFU|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HLSLSLGSGG 10
HL + G+GG
Sbjct: 152 HLEFTAGAGG 161


>sp|HMGCS_PYRAB|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 HLSLSLGSGG 10
HL + G+GG
Sbjct: 152 HLEFTAGAGG 161


>sp|HMGCS_PYRHO|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HLSLSLGSGG 10
HL + G+GG
Sbjct: 152 HLEFTAGAGG 161


>sp|DAPAL_THEAC|UNCHARACTERIZED DapA-like lyase Ta1157|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LSLSLGSGG 10
LSLS+G+ G
Sbjct: 193 LSLSIGASG 201


>sp|HMGCS_THEON|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus onnurineus (strain NA1)

Query: 1 HLSLSLGSGG 10
HL + G+GG
Sbjct: 152 HLEFTAGAGG 161


>sp|HMGCS_THEGJ|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 HLSLSLGSGG 10
HL + G+GG
Sbjct: 152 HLEFTAGAGG 161


>sp|HFLX_METJA|GTPASE HflX|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HLSLSLGS 8
HL+LS+G+
Sbjct: 345 HLNLSIGT 352


>sp|HMGCS_PYRIL|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 HLSLSLGSGG 10
HL S SGG
Sbjct: 151 HLEYSASSGG 160




669|Sequence|3341|3350|LGSGGEESDK

***** No hits found ******


670|Sequence|3346|3355|EESDKEKQEM

>sp|MCRA_METAC|METHYL-COENZYME M reductase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 2 ESDKEKQEM 10
E D KQEM
Sbjct: 44 EQDARKQEM 52




671|Sequence|3351|3360|EKQEMFAVHS

>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 EKQEMFA 7
EKQEMF
Sbjct: 531 EKQEMFG 537




672|Sequence|3356|3365|FAVHSVNLLL

>sp|THIC_PYRAB|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 FAVHSVNLL 9
A H+VNLL
Sbjct: 351 LAAHAVNLL 359


>sp|DCUP_THEAC|UROPORPHYRINOGEN decarboxylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 VHSVNL 8
VHSVNL
Sbjct: 328 VHSVNL 333




673|Sequence|3361|3370|VNLLLKSIGA

>sp|DP2S_PYRHO|DNA polymerase II small subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 NLLLKSIGA 10
N LKSIGA
Sbjct: 55 NEFLKSIGA 63


>sp|RL11_HYPBU|LARGE ribosomal subunit protein uL11|Hyperthermus butylicus (strain DSM

Query: 3 LLLKSIGA 10
LLLK++GA
Sbjct: 76 LLLKAVGA 83




674|Sequence|3366|3375|KSIGATLTDV

>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 IGATLTDV 10
IG TL+DV
Sbjct: 817 IGGTLSDV 824


>sp|GFCR_METBU|TRANSCRIPTIONAL regulator GfcR|Methanococcoides burtonii (strain DSM 6242

Query: 2 SIGATLTDV 10
S GAT+TDV
Sbjct: 154 SSGATVTDV 162


>sp|SYFB_PYRAE|PHENYLALANINE--TRNA ligase beta subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 GATLTD 9
GATLTD
Sbjct: 443 GATLTD 448


>sp|SECF_METJA|PROTEIN-EXPORT membrane protein SecF|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KSIGATLT 8
K+IGATL+
Sbjct: 107 KTIGATLS 114




675|Sequence|3371|3380|TLTDVDDLIF

>sp|FER9_METJA|UNCHARACTERIZED ferredoxin MJ0265|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LTDVDDLIF 10
L DV++LIF
Sbjct: 122 LVDVNELIF 130


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 TLTDVDDLI 9
TL+DVD++I
Sbjct: 820 TLSDVDEII 828


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 LTDVDDLI 9
LTD++D+I
Sbjct: 1024 LTDIEDVI 1031


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 LTDVDDLI 9
LTD++D+I
Sbjct: 1015 LTDIEDVI 1022


>sp|RNH2_METHJ|RIBONUCLEASE HII|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 TDVDDLI 9
TD+DDLI
Sbjct: 25 TDMDDLI 31


>sp|ENO_METST|ENOLASE stadtmanae (strain ATCC 43021

Query: 2 LTDVDDLI 9
+TDV+DLI
Sbjct: 60 ITDVEDLI 67


>sp|RS5_METS3|SMALL ribosomal subunit protein uS5|Methanobrevibacter smithii (strain

Query: 1 TLTDVDDL 8
T+TD+D++
Sbjct: 22 TITDIDEI 29


>sp|SYC_SULAC|CYSTEINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LTDVDDLI 9
+TD+DD I
Sbjct: 69 ITDIDDKI 76


>sp|SYC_STAMF|CYSTEINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 LTDVDDLI 9
+TD+DD I
Sbjct: 69 ITDIDDKI 76


>sp|SYC_METS5|CYSTEINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 LTDVDDLI 9
+TD+DD I
Sbjct: 66 ITDIDDKI 73


>sp|SYC_IGNH4|CYSTEINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 LTDVDDLI 9
+TD+DD I
Sbjct: 67 ITDIDDKI 74


>sp|SYC_AERPE|CYSTEINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LTDVDDLI 9
+TD+DD I
Sbjct: 67 ITDIDDKI 74


>sp|GATE_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 1 TLTDVDDLI 9
+L D+DDL+
Sbjct: 245 SLDDIDDLV 253


>sp|GATE_HALS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 1 TLTDVDDLI 9
+L D+DDL+
Sbjct: 245 SLDDIDDLV 253


>sp|RS5_META3|SMALL ribosomal subunit protein uS5|Methanococcus aeolicus (strain ATCC

Query: 1 TLTDVDDLI 9
T+TD+D +I
Sbjct: 27 TITDIDYII 35


>sp|GATE_HALMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Haloarcula marismortui (strain ATCC

Query: 1 TLTDVDDLI 9
+L D+DDL+
Sbjct: 245 SLDDIDDLV 253


>sp|SYC_SULTO|CYSTEINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LTDVDDLI 9
+TD+DD I
Sbjct: 68 ITDIDDKI 75


>sp|GATE_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Natronomonas pharaonis (strain ATCC

Query: 1 TLTDVDDLI 9
+L D+DDL+
Sbjct: 244 SLDDIDDLV 252


>sp|PC2DH_METJA|PUTATIVE precorrin-2 dehydrogenase|Methanocaldococcus jannaschii (strain

Query: 3 TDVDDLIF 10
T+VD++IF
Sbjct: 122 TEVDEVIF 129


>sp|HVO19_HALVD|PROBABLE S-adenosylmethionine-dependent methyltransferase

Query: 3 TDVDDLIF 10
TD DDL F
Sbjct: 82 TDTDDLSF 89


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 LTDVDDLI 9
+TD+DD I
Sbjct: 67 ITDIDDKI 74




676|Sequence|3376|3385|DDLIFKLAYY

>sp|HCGE_METTM|GUANYLYLPYRIDINOL adenylase HcgE|Methanothermobacter marburgensis (strain ATCC

Query: 1 DDLIFKL 7
DDLIF+L
Sbjct: 54 DDLIFRL 60


>sp|CDC6_DESA1|ORC1-TYPE DNA replication protein|Desulfurococcus amylolyticus (strain DSM

Query: 1 DDLIFKL 7
DDLI+KL
Sbjct: 161 DDLIYKL 167


>sp|ENDA_SULTO|TRNA-SPLICING endonuclease|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 LIFKLAYY 10
LI+K+ YY
Sbjct: 20 LIYKMGYY 27


>sp|AMZA_THEKO|ARCHAEMETZINCIN kodakarensis (strain ATCC BAA-918

Query: 1 DDLIFKLAYY 10
DD KL YY
Sbjct: 161 DDTDIKLPYY 170




677|Sequence|3381|3390|KLAYYEIRYQ

>sp|AGOG_AERPE|N-GLYCOSYLASE/DNA lyase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KLAYYEIR 8
K+AYY +R
Sbjct: 167 KIAYYAVR 174


>sp|ASPD_METVS|L-ASPARTATE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LAYYEIRYQ 10
LA+Y++ Y+
Sbjct: 31 LAFYDVNYE 39


>sp|VORA_PYRFU|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus furiosus (strain ATCC 43587

Query: 4 YYEIRYQ 10
YYE RY+
Sbjct: 219 YYEFRYK 225


>sp|VORA_PYRHO|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus horikoshii (strain ATCC

Query: 4 YYEIRYQ 10
YYE RY+
Sbjct: 219 YYEFRYK 225


>sp|VORA_PYRAB|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus abyssi (strain GE5 /

Query: 4 YYEIRYQ 10
YYE RY+
Sbjct: 220 YYEFRYK 226




678|Sequence|3386|3395|EIRYQFYKRD

>sp|IF6_CENSY|TRANSLATION initiation factor 6|Cenarchaeum symbiosum (strain A)

Query: 1 EIRYQFYKR 9
EI Y+FYK+
Sbjct: 77 EIEYEFYKK 85


>sp|SYH_PICTO|HISTIDINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 EIRYQFYKR 9
EIRY F K+
Sbjct: 18 EIRYDFIKK 26


>sp|SYK_PYRHO|LYSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EIRYQFYKRD 10
EIR F KRD
Sbjct: 139 EIRLAFEKRD 148


>sp|FLUC_IGNH4|FLUORIDE-SPECIFIC ion channel FluC|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 IRYQFYK 8
+RY FYK
Sbjct: 17 VRYFFYK 23


>sp|RL39_SULTO|LARGE ribosomal subunit protein eL39|Sulfurisphaera tokodaii (strain

Query: 1 EIRYQFYKRD 10
+ RY F++RD
Sbjct: 34 KFRYNFHRRD 43




679|Sequence|3391|3400|FYKRDQLIWS

>sp|GLMU_METJA|BIFUNCTIONAL protein GlmU|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YKRDQLIW 9
YKRD+LI+
Sbjct: 397 YKRDELIF 404


>sp|Y1182_METJA|UNCHARACTERIZED protein MJ1182|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FYKRDQLIWS 10
+YK D +W+
Sbjct: 221 YYKNDHELWT 230


>sp|CCA_THEKO|CCA-ADDING enzyme|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FYKRDQLIW 9
FY++++ +W
Sbjct: 378 FYRKNERVW 386


>sp|GLMU_METVS|BIFUNCTIONAL protein GlmU|Methanococcus vannielii (strain ATCC 35089

Query: 2 YKRDQLI 8
YK+D+LI
Sbjct: 403 YKKDELI 409


>sp|AATC_PYRAB|A-TYPE ATP synthase subunit C|Pyrococcus abyssi (strain GE5 /

Query: 2 YKRDQLIW 9
YK Q+IW
Sbjct: 23 YKTGQIIW 30


>sp|AATC_PYRHO|A-TYPE ATP synthase subunit C|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YKRDQLIW 9
YK Q+IW
Sbjct: 23 YKTGQIIW 30


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 FYKRDQLI 8
FYK D+L+
Sbjct: 608 FYKPDELV 615


>sp|CCA_PYRHO|CCA-ADDING enzyme|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FYKRDQLIW 9
FY+++ ++W
Sbjct: 372 FYEKNDIVW 380


>sp|CCA_THEGJ|CCA-ADDING enzyme|Thermococcus gammatolerans (strain DSM 15229

Query: 1 FYKRDQLIW 9
FY++++ +W
Sbjct: 376 FYRKNEKVW 384


>sp|CCA_PYRFU|CCA-ADDING enzyme|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FYKRDQLIW 9
FY++++ +W
Sbjct: 372 FYEKNEKVW 380


>sp|ALAXL_PYRHO|ALANYL-TRNA editing protein AlaX-L|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FYKRDQLIW 9
FYK+ + +W
Sbjct: 221 FYKKSKNLW 229


>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YKRDQLIW 9
YKR+ L W
Sbjct: 1211 YKREDLRW 1218




680|Sequence|3396|3405|QLIWSVVRHY

>sp|SYR_KORCO|ARGININE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 LIWSVVRHY 10
L W V RHY
Sbjct: 156 LGWDVRRHY 164


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 WSVVRHY 10
WS++RH+
Sbjct: 603 WSLMRHH 609


>sp|GATE_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Aeropyrum pernix (strain ATCC 700893

Query: 1 QLIWSVVR 8
QL W V+R
Sbjct: 476 QLAWEVIR 483


>sp|RIO2_METJA|RIO-TYPE serine/threonine-protein kinase Rio2|Methanocaldococcus jannaschii

Query: 3 IWSVVRHY 10
IW+V+R++
Sbjct: 240 IWNVIRYF 247


>sp|NK_METJA|NUCLEOSIDE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LIWSVVRHY 10
+W +HY
Sbjct: 113 FLWGAAKHY 121


>sp|SYTC_SULAC|THREONINE--TRNA ligase catalytic subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 2 LIWSVVRHY 10
L+W + HY
Sbjct: 202 LLWKISGHY 210


>sp|RNP3_THEGJ|RIBONUCLEASE P protein component 3|Thermococcus gammatolerans (strain DSM 15229

Query: 3 IWSVVRHY 10
+W +VR Y
Sbjct: 156 VWELVRKY 163




681|Sequence|3401|3410|VVRHYSEQFL

>sp|FAEHP_METHJ|BIFUNCTIONAL enzyme Fae/Hps|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 VRHYSEQFL 10
VRH +E+FL
Sbjct: 368 VRHAAEEFL 376


>sp|FAEHP_METPE|BIFUNCTIONAL enzyme Fae/Hps|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 VRHYSEQFL 10
+RH +E+FL
Sbjct: 368 IRHATEEFL 376


>sp|RIFK_METMJ|RIBOFLAVIN kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 VRHYSEQF 9
+ HY EQF
Sbjct: 112 IPHYKEQF 119


>sp|GGR_METVS|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus vannielii (strain ATCC 35089

Query: 3 RHYSEQFL 10
++YSE+FL
Sbjct: 312 KNYSEEFL 319


>sp|RIFK_METLZ|RIBOFLAVIN kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 VRHYSEQF 9
+ HY EQF
Sbjct: 114 IPHYQEQF 121


>sp|AATB_SULAC|A-TYPE ATP synthase subunit B|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VRHYSEQFL 10
VR Y E+F+
Sbjct: 125 VREYPEEFI 133


>sp|DCD_THESM|DCTP deaminase|Thermococcus sibiricus (strain DSM 12597

Query: 1 VVRHYSEQFL 10
V+ HY E+F+
Sbjct: 114 VILHYEERFV 123


>sp|DAPAL_THEAC|UNCHARACTERIZED DapA-like lyase Ta1157|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VVRHYSEQF 9
++RH +E+F
Sbjct: 173 IIRHKNEKF 181


>sp|TYSY_METTH|PUTATIVE thymidylate synthase|Methanothermobacter thermautotrophicus

Query: 5 YSEQFL 10
YSEQFL
Sbjct: 83 YSEQFL 88


>sp|TYSY_METTM|PUTATIVE thymidylate synthase|Methanothermobacter marburgensis (strain

Query: 5 YSEQFL 10
YSEQFL
Sbjct: 83 YSEQFL 88


>sp|HIS7_METHJ|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VVRHYSEQFL 10
+VRH+ E F+
Sbjct: 133 LVRHFFESFI 142


>sp|SYDND_METVS|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 4 HYSEQFL 10
HYSEQ +
Sbjct: 11 HYSEQVI 17


>sp|SYR_METLZ|ARGININE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 VVRHYSE 7
+VRHY E
Sbjct: 184 IVRHYVE 190


>sp|Y084_ARCFU|UNCHARACTERIZED protein AF_0084|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VRHYSEQF 9
+RHY+E+
Sbjct: 81 IRHYAEEL 88




682|Sequence|3406|3415|SEQFLKQMYV

>sp|RL1_PYRAR|LARGE ribosomal subunit protein uL1|Pyrobaculum arsenaticum (strain DSM

Query: 2 EQFLKQMYV 10
+Q+LK++YV
Sbjct: 196 KQYLKEIYV 204


>sp|COFE_METBF|COENZYME F420:L-glutamate ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 EQFLKQMY 9
E F+K+MY
Sbjct: 228 ETFIKEMY 235


>sp|UVRC_METTH|UVRABC system protein C|Methanothermobacter thermautotrophicus (strain

Query: 2 EQFLKQMY 9
E FLKQ Y
Sbjct: 285 EAFLKQYY 292


>sp|UVRC_METBU|UVRABC system protein C|Methanococcoides burtonii (strain DSM 6242

Query: 1 SEQFLKQMY 9
+E+F+KQ Y
Sbjct: 292 TEEFIKQYY 300


>sp|GUAAB_METTH|GMP synthase [glutamine-hydrolyzing] subunit B|Methanothermobacter

Query: 1 SEQFLKQM 8
SE+FLK++
Sbjct: 83 SEEFLKEL 90


>sp|THIL_METJA|THIAMINE-MONOPHOSPHATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SEQFLKQMY 9
+E+F+K++Y
Sbjct: 96 NEKFIKELY 104




683|Sequence|3411|3420|KQMYVLVLGL

>sp|DTDA_PYRAE|D-AMINOACYL-TRNA deacylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 MYVLVLGL 10
MYVLVL L
Sbjct: 1 MYVLVLSL 8


>sp|RL31_METHJ|LARGE ribosomal subunit protein eL31|Methanospirillum hungatei JF-1

Query: 1 KQMYVLVLG 9
+QMYV+ LG
Sbjct: 7 EQMYVIPLG 15


>sp|ACYP_SULAC|ACYLPHOSPHATASE acidocaldarius (strain ATCC 33909

Query: 1 KQMYVLVLGL 10
K+MYV+V G+
Sbjct: 5 KRMYVIVYGI 14


>sp|DTDA_PYRCJ|D-AMINOACYL-TRNA deacylase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 MYVLVLGL 10
MYVLVL +
Sbjct: 1 MYVLVLSM 8




684|Sequence|3416|3425|LVLGLDVLGN

>sp|TMCA_AERPE|TRNA(MET) cytidine acetyltransferase TmcA|Aeropyrum pernix (strain ATCC

Query: 1 LVLGLDVLG 9
L+ GLDVLG
Sbjct: 257 LLRGLDVLG 265


>sp|DNAK_METAR|CHAPERONE protein DnaK|Methanocella arvoryzae (strain DSM 22066

Query: 1 LVLGLDVLGN 10
L LG++ LGN
Sbjct: 368 LSLGIETLGN 377


>sp|SYR_THEKO|ARGININE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 GLDVLG 9
GLDVLG
Sbjct: 630 GLDVLG 635


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LVLGLDV 7
LV+GLDV
Sbjct: 1027 LVIGLDV 1033


>sp|GATA_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Archaeoglobus fulgidus (strain ATCC

Query: 1 LVLGLDVLGN 10
L +GL V+GN
Sbjct: 426 LPVGLQVIGN 435


>sp|G1PDH_METB6|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanoregula boonei (strain DSM 21154

Query: 1 LVLGLDVLG 9
+V+G DVLG
Sbjct: 26 VVIGHDVLG 34


>sp|SYR_METJA|ARGININE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LGLDVLG 9
+G+DVLG
Sbjct: 331 IGIDVLG 337


>sp|PGK_NATPD|PHOSPHOGLYCERATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 LDVLGN 10
LDVLGN
Sbjct: 179 LDVLGN 184




685|Sequence|3421|3430|DVLGNPFGLI

>sp|CAS1A_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DVLGNPFG 8
D LGNPFG
Sbjct: 72 DGLGNPFG 79


>sp|GIN23_SULAC|DNA replication complex GINS protein|Sulfolobus acidocaldarius (strain

Query: 1 DVLGNPF 7
D++GNPF
Sbjct: 175 DIIGNPF 181


>sp|Y1114_METJA|UNCHARACTERIZED protein MJ1114|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DVLGNPF 7
D+LGNP+
Sbjct: 45 DMLGNPY 51


>sp|IF2P_METM5|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 VLGNPFGLI 10
V+GNP G+I
Sbjct: 267 VVGNPDGVI 275


>sp|HDRB1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit B|Methanosarcina acetivorans

Query: 1 DVLGNP 6
DV+GNP
Sbjct: 180 DVIGNP 185


>sp|IF2P_META3|PROBABLE translation initiation factor IF-2|Methanococcus aeolicus (strain

Query: 2 VLGNPFGLI 10
V+GNP G++
Sbjct: 267 VIGNPDGIV 275


>sp|IF2P_METVS|PROBABLE translation initiation factor IF-2|Methanococcus vannielii (strain

Query: 2 VLGNPFGLI 10
V+GNP G++
Sbjct: 267 VIGNPDGIV 275


>sp|SYP_METKA|PROLINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 DVLGNPF 7
DVLG P+
Sbjct: 452 DVLGTPY 458


>sp|ANTRB_HALVD|PUTATIVE ABC transporter anion-binding protein|Haloferax volcanii (strain

Query: 2 VLGNPFGLI 10
+L NP+G+I
Sbjct: 244 ILKNPYGVI 252


>sp|MRE11_METMP|DNA double-strand break repair protein|Methanococcus maripaludis

Query: 4 GNPFGLI 10
G PFGL+
Sbjct: 94 GKPFGLL 100


>sp|RL10E_HYPBU|LARGE ribosomal subunit protein uL16|Hyperthermus butylicus (strain DSM

Query: 2 VLGNPFG 8
V+GNP G
Sbjct: 40 VMGNPHG 46


>sp|PORB_PYRHO|PYRUVATE synthase subunit PorB|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LGNPFGL 9
+GNPF L
Sbjct: 194 IGNPFDL 200


>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GNPFGLI 10
G+PFGL+
Sbjct: 213 GSPFGLM 219


>sp|AGLB1_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GNPFGLI 10
G+PFGL+
Sbjct: 215 GSPFGLM 221


>sp|AMPD_PYRHO|ANHYDROMEVALONATE phosphate decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VLGNPFGLI 10
VLGNP L+
Sbjct: 176 VLGNPVHLL 184


>sp|AROK_PYRAB|SHIKIMATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 DVLGNPFGL 9
+V G PFG+
Sbjct: 69 EVTGEPFGV 77


>sp|MTRE_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanocaldococcus jannaschii (strain

Query: 2 VLGNPF 7
+LGNPF
Sbjct: 157 ILGNPF 162


>sp|MTRE_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanosarcina mazei (strain ATCC

Query: 2 VLGNPFGL 9
VLG+PF L
Sbjct: 156 VLGHPFPL 163


>sp|G3P_HALVA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Haloarcula vallismortis (Halobacterium vallismortis)

Query: 1 DVLGNPF 7
D+LG+P+
Sbjct: 288 DILGDPY 294


>sp|MTRE_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanosarcina barkeri (strain Fusaro

Query: 2 VLGNPFGL 9
VLG+PF L
Sbjct: 156 VLGHPFPL 163


>sp|MTRE_META3|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus aeolicus (strain ATCC

Query: 1 DVLGNPFGL 9
+ LGNPF L
Sbjct: 156 NALGNPFPL 164


>sp|MTRE_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanosarcina acetivorans (strain

Query: 2 VLGNPFGL 9
VLG+PF L
Sbjct: 156 VLGHPFPL 163


>sp|PURA_THEAC|ADENYLOSUCCINATE synthetase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DVLGNPFGLI 10
D +G P G+I
Sbjct: 412 DQVGKPIGII 421




686|Sequence|3426|3435|PFGLIRGLSE

>sp|MTAD_THEKO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PFGLIRGLSE 10
P GL+RGL++
Sbjct: 64 PMGLLRGLAD 73


>sp|MTAD_THEON|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus onnurineus (strain NA1)

Query: 1 PFGLIRGLSE 10
P GL RGL++
Sbjct: 64 PMGLFRGLAD 73


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 2 FGLIRGLSE 10
FG+I+ LSE
Sbjct: 414 FGVIKALSE 422


>sp|MCRW_METJA|METHYL-COENZYME M reductase II operon|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PFGLIRGL 8
PFG RGL
Sbjct: 58 PFGPARGL 65


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FGLIRGLSE 10
GL+RGL E
Sbjct: 594 LGLLRGLIE 602


>sp|Y1800_ARCFU|PUTATIVE transport protein AF_1800|Archaeoglobus fulgidus (strain ATCC

Query: 2 FGLIRGLSE 10
+GLI+GL++
Sbjct: 74 YGLIQGLNQ 82


>sp|Y520_METJA|PUTATIVE NADH-ubiquinone oxidoreductase MJ0520|Methanocaldococcus jannaschii

Query: 1 PFGLIRG 7
PFG+++G
Sbjct: 190 PFGIVKG 196




687|Sequence|3431|3440|RGLSEGVEAL

>sp|CBIA_METJA|COBYRINATE a,c-diamide synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RGLSEGVEAL 10
RGL EG+ A+
Sbjct: 90 RGLYEGISAI 99


>sp|SURE_THEGJ|5'-NUCLEOTIDASE SurE|Thermococcus gammatolerans (strain DSM 15229

Query: 1 RGLSEGVEAL 10
RGL EGV+ L
Sbjct: 159 RGLPEGVDML 168


>sp|IF1A_PYRAE|TRANSLATION initiation factor 1A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RGLSEGVEAL 10
RG +E +EAL
Sbjct: 101 RGFAEAIEAL 110


>sp|CBIA_METS3|COBYRINATE a,c-diamide synthase|Methanobrevibacter smithii (strain ATCC

Query: 1 RGLSEGVEAL 10
RGL EG++++
Sbjct: 87 RGLYEGIDSI 96


>sp|SURE_METTH|5'-NUCLEOTIDASE SurE|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 RGLSEGVEAL 10
RGL EGV+ L
Sbjct: 164 RGLPEGVDFL 173


>sp|SURE_THEKO|5'-NUCLEOTIDASE SurE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RGLSEGVEAL 10
+GL EGV+ L
Sbjct: 159 KGLPEGVDML 168


>sp|RACD_PYRHO|ASPARTATE racemase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RGLSEGVEA 9
RG+ EGV+A
Sbjct: 157 RGIYEGVKA 165


>sp|SURE_ARCFU|5'-NUCLEOTIDASE SurE|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RGLSEGVEAL 10
+GL EGV+ L
Sbjct: 161 KGLPEGVDLL 170




688|Sequence|3436|3445|GVEALFYEPF

>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 3 EALFYEP 9
+ALF+EP
Sbjct: 598 DALFFEP 604


>sp|HEM2_METSC|DELTA-AMINOLEVULINIC acid dehydratase|Methanothermus sociabilis

Query: 6 FYEPF 10
FYEPF
Sbjct: 199 FYEPF 203


>sp|Y790_THEKO|UPF0179 protein TK0790|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GVEALFYEP 9
GVE +FY P
Sbjct: 15 GVEFIFYGP 23


>sp|LMRAC_THELN|LEUCINE/METHIONINE racemase|Thermococcus litoralis (strain ATCC 51850

Query: 1 GVEALFYEPF 10
GV ALF EP
Sbjct: 204 GVAALFAEPI 213


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 3 EALFYEP 9
+ALF+EP
Sbjct: 598 DALFFEP 604


>sp|AGLR_HALVD|PROBABLE flippase AglR|Haloferax volcanii (strain ATCC 29605

Query: 1 GVEALFY 7
GV+ALFY
Sbjct: 165 GVDALFY 171


>sp|Y048_ARCFU|UNCHARACTERIZED protein AF_0048|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 LFYEPF 10
+FYEPF
Sbjct: 118 IFYEPF 123


>sp|AGLB3_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GVEALFYEPF 10
G +FY PF
Sbjct: 270 GFSTIFYSPF 279


>sp|ATGT_AERPE|TRNA-GUANINE(15) transglycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 5 LFYEPF 10
LFY+PF
Sbjct: 424 LFYQPF 429


>sp|YR33_THEPE|UNCHARACTERIZED 33.4 kDa protein in|Thermofilum pendens

Query: 1 GVEALFYEP 9
GVE L Y+P
Sbjct: 85 GVEFLKYDP 93


>sp|NAOX_METJA|NADH oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GVEALFY 7
GVEA FY
Sbjct: 315 GVEAKFY 321


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 EALFYEP 9
+ALFY+P
Sbjct: 253 KALFYDP 259


>sp|Y1455_ARCFU|UNCHARACTERIZED protein AF_1455|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VEALFYEPF 10
V A+F EPF
Sbjct: 47 VSAVFGEPF 55


>sp|Y1381_PYRFU|UPF0179 protein PF1381|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GVEALFYEP 9
GVE ++Y P
Sbjct: 14 GVEFIYYGP 22


>sp|TBP2_METAC|TATA-BOX-BINDING protein 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GVEALFYEP 9
GVE + YEP
Sbjct: 123 GVENVEYEP 131




689|Sequence|3441|3450|FYEPFQGAVQ

>sp|HEM2_METTH|DELTA-AMINOLEVULINIC acid dehydratase|Methanothermobacter thermautotrophicus (strain

Query: 1 FYEPFQGAV 9
FY PF+GAV
Sbjct: 205 FYAPFRGAV 213


>sp|HEM2_METSC|DELTA-AMINOLEVULINIC acid dehydratase|Methanothermus sociabilis

Query: 1 FYEPFQGAV 9
FYEPF+ AV
Sbjct: 199 FYEPFRSAV 207


>sp|PRIS_PYRCJ|DNA primase small subunit PriS|Pyrobaculum calidifontis (strain DSM

Query: 1 FYEPFQGAV 9
F +PFQG V
Sbjct: 271 FEKPFQGTV 279


>sp|MRE11_SULAC|DNA double-strand break repair protein|Sulfolobus acidocaldarius

Query: 2 YEPFQGAVQ 10
Y P+QGA Q
Sbjct: 162 YLPYQGAWQ 170


>sp|Y2265_METBU|PUTATIVE nickel insertion protein|Methanococcoides burtonii (strain DSM

Query: 2 YEPFQGA 8
+EPF GA
Sbjct: 6 FEPFSGA 12


>sp|HEM2_ARCFU|DELTA-AMINOLEVULINIC acid dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FYEPFQGAVQ 10
FY PF+ A +
Sbjct: 200 FYSPFRDAAE 209


>sp|RIFK_HALMA|RIBOFLAVIN kinase|Haloarcula marismortui (strain ATCC 43049

Query: 2 YEPFQGAV 9
YEPF G +
Sbjct: 219 YEPFAGTL 226


>sp|ORNAT_PYRHO|ORNITHINE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FYEPFQG 7
F+EP QG
Sbjct: 229 FFEPIQG 235


>sp|RIFK_NATPD|RIBOFLAVIN kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 YEPFQGAV 9
YEPF G +
Sbjct: 130 YEPFPGTL 137


>sp|RIFK_HALWD|RIBOFLAVIN kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 YEPFQGAV 9
YEPF G +
Sbjct: 131 YEPFPGTL 138


>sp|Y048_ARCFU|UNCHARACTERIZED protein AF_0048|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FYEPF 5
FYEPF
Sbjct: 119 FYEPF 123


>sp|SECD_PYRFU|PROTEIN-EXPORT membrane protein SecD|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FYEPFQGAV 9
FY FQG +
Sbjct: 110 FYAEFQGII 118


>sp|ORNAT_THEKO|ORNITHINE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FYEPFQG 7
F+EP QG
Sbjct: 228 FFEPIQG 234


>sp|QUEC_HALMA|7-CYANO-7-DEAZAGUANINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 FYEPFQGAV 9
F++ FQG +
Sbjct: 143 FFDAFQGVI 151


>sp|ATGT_AERPE|TRNA-GUANINE(15) transglycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 FYEPFQG 7
FY+PF G
Sbjct: 425 FYQPFLG 431


>sp|AGLB3_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FYEPFQ 6
FY PFQ
Sbjct: 275 FYSPFQ 280




690|Sequence|3446|3455|QGAVQGPEEF

>sp|PELO_DESA1|PROTEIN pelota homolog|Desulfurococcus amylolyticus (strain DSM 18924

Query: 4 VQGPEEF 10
V+GPEEF
Sbjct: 82 VEGPEEF 88


>sp|UPPP_METST|UNDECAPRENYL-DIPHOSPHATASE stadtmanae (strain ATCC 43021

Query: 2 GAVQGPEEF 10
GAVQG EF
Sbjct: 11 GAVQGISEF 19


>sp|AMYA_PYRHO|ALPHA-AMYLASE horikoshii (strain ATCC 700860

Query: 1 QGAVQGPEEF 10
QG V+ P EF
Sbjct: 556 QGTVEYPAEF 565


>sp|PELO_AERPE|PROTEIN pelota homolog|Aeropyrum pernix (strain ATCC 700893

Query: 4 VQGPEEF 10
V+GP+EF
Sbjct: 81 VEGPDEF 87


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 QGAVQGPEEF 10
+GA +G EEF
Sbjct: 738 EGATKGLEEF 747


>sp|GSA_METKA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanopyrus kandleri (strain AV19 /

Query: 2 GAVQGPEEF 10
GA GPEE+
Sbjct: 277 GAFGGPEEY 285


>sp|RL3_META3|LARGE ribosomal subunit protein uL3|Methanococcus aeolicus (strain ATCC

Query: 1 QGAVQGP 7
+G+VQGP
Sbjct: 293 KGSVQGP 299


>sp|RL3_METJA|LARGE ribosomal subunit protein uL3|Methanocaldococcus jannaschii (strain

Query: 1 QGAVQGP 7
+G+VQGP
Sbjct: 295 KGSVQGP 301




691|Sequence|3451|3460|GPEEFAEGLV

>sp|THIC2_METST|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GPEEFAEGLV 10
GPE+ EG++
Sbjct: 337 GPEDVREGVI 346


>sp|HDLA_ARCPA|HETERODISULFIDE reductase subunit A-like protein|Archaeoglobus profundus (strain

Query: 2 PEEFAEGL 9
P+EF EGL
Sbjct: 265 PDEFNEGL 272


>sp|KPRS_METAC|RIBOSE-PHOSPHATE pyrophosphokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GPEEFAEGLV 10
P+E A+GLV
Sbjct: 157 APDEGAQGLV 166


>sp|Y1289_ARCFU|PUTATIVE GTPase AF_1289|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PEEFAEGLV 10
PEE EGL+
Sbjct: 3 PEEIVEGLL 11


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 3 EEFAEG 8
EEFAEG
Sbjct: 150 EEFAEG 155


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 3 EEFAEG 8
EEFAEG
Sbjct: 150 EEFAEG 155


>sp|GAD_SACS2|D-GLUCONATE/D-GALACTONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PEEFAE 7
PEEFAE
Sbjct: 139 PEEFAE 144


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 EEFAEG 8
EEFAEG
Sbjct: 150 EEFAEG 155


>sp|HDRA2_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 2 PEEFAEGL 9
P EF EGL
Sbjct: 263 PNEFDEGL 270


>sp|DPOL_THEGO|DNA polymerase|Thermococcus gorgonarius

Query: 3 EEFAEG 8
EEFAEG
Sbjct: 150 EEFAEG 155


>sp|GSA2_CENSY|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase 2|Cenarchaeum symbiosum (strain A)

Query: 3 EEFAEGL 9
E FAEGL
Sbjct: 428 ERFAEGL 434


>sp|SYP_HALWD|PROLINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GPEEFAEGLV 10
GP+E EG V
Sbjct: 357 GPDEATEGTV 366




692|Sequence|3456|3465|AEGLVIGVRS

>sp|RLME_METS3|RIBOSOMAL RNA large subunit methyltransferase|Methanobrevibacter smithii

Query: 2 EGLVIGV 8
EGLVIGV
Sbjct: 68 EGLVIGV 74


>sp|GATA_METST|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosphaera stadtmanae (strain ATCC

Query: 3 GLVIGVRS 10
GLVIG++S
Sbjct: 68 GLVIGIKS 75


>sp|GATA_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanothermobacter thermautotrophicus

Query: 3 GLVIGVRS 10
GLVIGV+S
Sbjct: 71 GLVIGVKS 78


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EGLVIGVR 9
EG++ GVR
Sbjct: 393 EGIIFGVR 400


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EGLVIGV 8
EGL+IG+
Sbjct: 2884 EGLIIGI 2890


>sp|DHQS_NITMS|3-DEHYDROQUINATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 EGLVIGVRS 10
EG++IG RS
Sbjct: 203 EGMLIGSRS 211


>sp|RL13_NANEQ|LARGE ribosomal subunit protein uL13|Nanoarchaeum equitans (strain

Query: 1 AEGLVIG 7
AEGLV+G
Sbjct: 11 AEGLVLG 17


>sp|CAS5_THETK|CRISPR-ASSOCIATED protein Cas5|Thermoproteus tenax (strain ATCC 35583

Query: 1 AEGLVIGVRS 10
AEGLV+ R
Sbjct: 58 AEGLVVAARP 67


>sp|GLPK2_SULAC|GLYCEROL kinase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 AEGLVIGV 8
A GL+IG+
Sbjct: 355 ARGLIIGI 362




693|Sequence|3461|3470|IGVRSLFGHT

>sp|SYE_METB6|GLUTAMATE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 GVRSLFGHT 10
GVR+ F HT
Sbjct: 626 GVRAYFTHT 634


>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain DSM

Query: 1 IGVRSLFG 8
+GVRSLF
Sbjct: 733 VGVRSLFA 740


>sp|GLPK_HALMA|GLYCEROL kinase|Haloarcula marismortui (strain ATCC 43049

Query: 5 SLFGHT 10
SL+GHT
Sbjct: 232 SLYGHT 237


>sp|CARA_THEVO|CARBAMOYL phosphate synthase small chain|Thermoplasma volcanium (strain ATCC

Query: 1 IGVRSLFG 8
IGV+ LFG
Sbjct: 233 IGVKPLFG 240


>sp|CAS3_METTH|CRISPR-ASSOCIATED nuclease/helicase Cas3|Methanothermobacter thermautotrophicus

Query: 1 IGVRSLFGHT 10
+G+ S+FG T
Sbjct: 815 LGLDSIFGET 824




694|Sequence|3466|3475|LFGHTVGGAA

>sp|AROB_SULTO|3-DEHYDROQUINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FGHTVGGA 9
FGHT+G A
Sbjct: 235 FGHTIGHA 242


>sp|AROB_SACS2|3-DEHYDROQUINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 FGHTVGGA 9
FGHT+G A
Sbjct: 236 FGHTIGHA 243


>sp|AROB_PICTO|3-DEHYDROQUINATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 FGHTVGGA 9
FGHT+G A
Sbjct: 227 FGHTIGHA 234


>sp|AROB_SULAC|3-DEHYDROQUINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 FGHTVGGA 9
FGHT+G A
Sbjct: 236 FGHTIGHA 243


>sp|AROC_META3|CHORISMATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GHTVGGA 9
GHT+GGA
Sbjct: 131 GHTIGGA 137


>sp|PIP_SACS2|PROLINE iminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LFGHTVGGA 9
L GH+ GGA
Sbjct: 112 LLGHSYGGA 120


>sp|AROC_METJA|CHORISMATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GHTVGGA 9
GH +GGA
Sbjct: 135 GHVIGGA 141


>sp|IDI2_PICTO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Picrophilus torridus (strain ATCC 700027

Query: 1 LFGHTVGGAA 10
+FG T+GG A
Sbjct: 281 MFGATLGGFA 290


>sp|AROC_METST|CHORISMATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 GHTVGGA 9
GH +GGA
Sbjct: 133 GHVIGGA 139


>sp|AROB_PYRFU|3-DEHYDROQUINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FGHTVGGA 9
GHTVG A
Sbjct: 225 LGHTVGHA 232


>sp|AROB_PYRAB|3-DEHYDROQUINATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 FGHTVGGA 9
GHTVG A
Sbjct: 224 LGHTVGHA 231


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 LFGHTVGG 8
+ GH VGG
Sbjct: 247 VIGHNVGG 254


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 LFGHTVGG 8
+ GH VGG
Sbjct: 247 VIGHNVGG 254


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 LFGHTVGG 8
+ GH VGG
Sbjct: 247 VIGHNVGG 254


>sp|MTRC_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanosarcina barkeri (strain

Query: 1 LFGHTVGGAA 10
LFG +VGG A
Sbjct: 88 LFGLSVGGTA 97


>sp|AROC_METTH|CHORISMATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 GHTVGGA 9
GH +GGA
Sbjct: 140 GHVIGGA 146


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 LFGHTVGG 8
+ GH VGG
Sbjct: 247 VIGHNVGG 254


>sp|Y516_METJA|UNCHARACTERIZED protein MJ0516|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GHTVGG 8
GH VGG
Sbjct: 98 GHVVGG 103


>sp|AMPPA_THESM|AMP phosphorylase|Thermococcus sibiricus (strain DSM 12597

Query: 3 GHTVGGA 9
GHTVG A
Sbjct: 325 GHTVGPA 331


>sp|RIFK_METMP|RIBOFLAVIN kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LFGHTVGG 8
+FGH V G
Sbjct: 3 IFGHVVSG 10


>sp|MTRC_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanosarcina acetivorans (strain

Query: 1 LFGHTVGGAA 10
LFG +VGG A
Sbjct: 88 LFGLSVGGIA 97


>sp|ABLA_METMP|L-LYSINE 2,3-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LFGHTVGGA 9
L GHT G A
Sbjct: 326 LIGHTTGFA 334


>sp|AMPPA_THEON|AMP phosphorylase|Thermococcus onnurineus (strain NA1)

Query: 3 GHTVGGA 9
GHTVG A
Sbjct: 325 GHTVGPA 331


>sp|AROB_PYRAE|3-DEHYDROQUINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GHTVGGA 9
GHTVG A
Sbjct: 228 GHTVGHA 234


>sp|AROB_PYRCJ|3-DEHYDROQUINATE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 GHTVGGA 9
GHTVG A
Sbjct: 227 GHTVGHA 233




695|Sequence|3471|3480|VGGAAGVVSR

>sp|K6PF_METJA|BIFUNCTIONAL ADP-specific glucokinase/phosphofructokinase|Methanocaldococcus

Query: 1 VGGAAGVVS 9
+GG AG+VS
Sbjct: 105 MGGQAGIVS 113


>sp|PCNA_CENSY|DNA polymerase sliding clamp|Cenarchaeum symbiosum (strain A)

Query: 1 VGGAAGVVS 9
VGGAAG V+
Sbjct: 209 VGGAAGSVT 217


>sp|K6PF_METAC|ADP-SPECIFIC phosphofructokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VGGAAGVVS 9
+GG AG++S
Sbjct: 113 MGGQAGIIS 121


>sp|PGK2_METVS|2-PHOSPHOGLYCERATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VGGAAGV 7
VGGA+GV
Sbjct: 100 VGGASGV 106


>sp|PYRK_THEVO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermoplasma volcanium

Query: 1 VGGAAGVVS 9
VGG +G+VS
Sbjct: 97 VGGGSGIVS 105


>sp|K6PF_PYRFU|ADP-SPECIFIC phosphofructokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VGGAAGVVS 9
+GG AG+++
Sbjct: 96 IGGQAGIIA 104


>sp|GGGPS_AERPE|GERANYLGERANYLGLYCERYL phosphate synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GGAAGVVSR 10
GGAAG V+R
Sbjct: 138 GGAAGFVAR 146


>sp|PGK2_METKA|2-PHOSPHOGLYCERATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 VGGAAGV 7
+GGA+GV
Sbjct: 117 IGGASGV 123


>sp|PGK2_METJA|2-PHOSPHOGLYCERATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGGAAGV 7
+GGA+GV
Sbjct: 97 IGGASGV 103


>sp|PGK2_METTH|2-PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VGGAAGV 7
+GGA+GV
Sbjct: 96 IGGASGV 102


>sp|RKD4_PYRCJ|ARCADIN-4 calidifontis (strain DSM 21063

Query: 2 GGAAGVVSR 10
GG +G+VSR
Sbjct: 203 GGYSGLVSR 211




696|Sequence|3476|3485|GVVSRITGSV

>sp|AATA3_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain

Query: 1 GVVSRITGSV 10
GV+ R+TG V
Sbjct: 6 GVIIRVTGPV 15


>sp|AATA_METMJ|A-TYPE ATP synthase subunit A|Methanoculleus marisnigri (strain ATCC

Query: 1 GVVSRITGSV 10
GV+ RI+G V
Sbjct: 11 GVLKRISGPV 20


>sp|AMTAB_METTH|PROBABLE threonylcarbamoyladenosine tRNA

Query: 1 GVVSRITG 8
G+V RITG
Sbjct: 116 GLVERITG 123


>sp|RRP4_KORCO|EXOSOME complex component Rrp4|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GVVSRITGS 9
G+VS+I+G+
Sbjct: 73 GIVSKISGN 81




697|Sequence|3481|3490|ITGSVGKGLA

>sp|ADEC_METJA|ADENINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TGSVGKGL 9
TG++GKGL
Sbjct: 424 TGNIGKGL 431


>sp|FNO_ARCFU|F420-DEPENDENT NADP reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TGSVGKGLA 10
TG++GKGLA
Sbjct: 9 TGNLGKGLA 17


>sp|PELO_NATPD|PROTEIN pelota homolog|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ITGSVGKG 8
ITG+ GKG
Sbjct: 163 ITGTTGKG 170


>sp|IF2B_PICTO|TRANSLATION initiation factor 2 subunit|Picrophilus torridus (strain ATCC

Query: 2 TGSVGKGLA 10
TGS G+G+A
Sbjct: 159 TGSAGEGIA 167


>sp|PYRG_CALMQ|CTP synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 ITGSVGKGLA 10
+ SVGKG+A
Sbjct: 11 VMSSVGKGIA 20


>sp|XPD_SULAC|ATP-DEPENDENT DNA helicase XPD|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ITGSVGKG 8
+ GSVGKG
Sbjct: 440 LIGSVGKG 447


>sp|HEM11_PYRAR|GLUTAMYL-TRNA reductase 1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 GSVGKGL 9
GSVG+GL
Sbjct: 177 GSVGRGL 183


>sp|ADEC_STAMF|ADENINE deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 2 TGSVGKGL 9
TGS+GKG
Sbjct: 466 TGSMGKGF 473


>sp|FNO_METOG|F420-DEPENDENT NADP reductase|Methanogenium organophilum

Query: 2 TGSVGKGLA 10
TG++G+GLA
Sbjct: 9 TGNIGEGLA 17


>sp|PUR5_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 ITGSVGKGLA 10
+ G +GKGLA
Sbjct: 110 VAGEIGKGLA 119


>sp|POK_METJA|PANTOATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TGSVGKGL 9
TGS+G G+
Sbjct: 22 TGSIGAGI 29


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 1 ITGSVGK 7
I+GSVGK
Sbjct: 220 ISGSVGK 226


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 1 ITGSVGK 7
I+GSVGK
Sbjct: 220 ISGSVGK 226


>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 1 ITGSVGK 7
ITG++GK
Sbjct: 309 ITGNIGK 315


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 3 GSVGKGLA 10
G VG+G+A
Sbjct: 13 GDVGRGIA 20


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 1 ITGSVGK 7
ITG++GK
Sbjct: 310 ITGNIGK 316


>sp|AATK_METJA|A-TYPE ATP synthase subunit K|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ITGSVGKGLA 10
I G+VG GLA
Sbjct: 6 ILGAVGAGLA 15


>sp|TKTN_METJA|PUTATIVE transketolase N-terminal section|Methanocaldococcus jannaschii

Query: 2 TGSVGKGLA 10
TGS+G+G +
Sbjct: 117 TGSLGQGFS 125


>sp|DHE3_THEPR|GLUTAMATE dehydrogenase|Thermococcus profundus

Query: 1 ITGSVGKGLA 10
I GS+G+G A
Sbjct: 181 IGGSLGRGTA 190




698|Sequence|3486|3495|GKGLAAITMD

>sp|SUCC1_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit beta|Archaeoglobus fulgidus (strain

Query: 1 GKGLAAITMD 10
G GLA TMD
Sbjct: 256 GAGLAMATMD 265


>sp|MFNA_METST|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosphaera stadtmanae

Query: 2 KGLAAITMD 10
KG+++IT+D
Sbjct: 222 KGVSSITID 230


>sp|CBIA_SULTO|COBYRINATE a,c-diamide synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KGLAAITMD 10
KG+AAI D
Sbjct: 241 KGIAAIAYD 249


>sp|DPCKG_METBU|GTP-DEPENDENT dephospho-CoA kinase|Methanococcoides burtonii (strain DSM 6242

Query: 2 KGLAAITMD 10
KG A IT+D
Sbjct: 81 KGFAEITVD 89


>sp|PSA_NATPD|PROTEASOME subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GKGLAAITMD 10
G GLA +T+D
Sbjct: 211 GIGLATVTVD 220




699|Sequence|3491|3500|AITMDKEYQQ

>sp|DPCKG_SACS2|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus solfataricus (strain ATCC

Query: 1 AITMDKEYQ 9
AIT +KEY+
Sbjct: 86 AITRNKEYK 94


>sp|ENDA_PICTO|TRNA-SPLICING endonuclease|Picrophilus torridus (strain ATCC 700027

Query: 2 ITMDKEYQ 9
IT+D+EY+
Sbjct: 122 ITVDEEYE 129


>sp|RPO1C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanocaldococcus jannaschii (strain

Query: 2 ITMDKEYQQ 10
+T+D+EY++
Sbjct: 845 LTIDREYEE 853




700|Sequence|3496|3505|KEYQQKRREE

>sp|CYAS_METHJ|CYSTEATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KEYQQKRRE 9
+ +Q+KRRE
Sbjct: 272 RAWQEKRRE 280


>sp|Y1566_METJA|UNCHARACTERIZED protein MJ1566|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KEYQQKR 7
KEYQ+KR
Sbjct: 36 KEYQRKR 42


>sp|KCY_DESA1|CYTIDYLATE kinase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 KEYQQKRR 8
+EY Q+RR
Sbjct: 128 REYSQRRR 135




701|Sequence|3501|3510|KRREELSRQP

>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KRREELSRQ 9
KR++ELSR+
Sbjct: 587 KRKDELSRR 595


>sp|RS8E_PICTO|SMALL ribosomal subunit protein eS8|Picrophilus torridus (strain ATCC

Query: 1 KRREELSRQP 10
KRR EL R+P
Sbjct: 23 KRRYELGREP 32


>sp|RS8E_THEKO|SMALL ribosomal subunit protein eS8|Thermococcus kodakarensis (strain

Query: 1 KRREELSRQP 10
KR+ EL R+P
Sbjct: 23 KRKRELGREP 32


>sp|RS8E_THEON|SMALL ribosomal subunit protein eS8|Thermococcus onnurineus (strain

Query: 1 KRREELSRQP 10
KR+ EL R+P
Sbjct: 23 KRKRELGREP 32


>sp|RS8E_METS3|SMALL ribosomal subunit protein eS8|Methanobrevibacter smithii (strain

Query: 1 KRREELSRQP 10
KR+ EL R P
Sbjct: 23 KRKAELGRDP 32


>sp|RS8E_PYRFU|SMALL ribosomal subunit protein eS8|Pyrococcus furiosus (strain ATCC

Query: 1 KRREELSRQP 10
KR+ EL R+P
Sbjct: 23 KRKRELGREP 32


>sp|RS8E_PYRAB|SMALL ribosomal subunit protein eS8|Pyrococcus abyssi (strain GE5 /

Query: 1 KRREELSRQP 10
KR+ EL R+P
Sbjct: 23 KRKRELGREP 32


>sp|RS8E_THEGJ|SMALL ribosomal subunit protein eS8|Thermococcus gammatolerans (strain

Query: 1 KRREELSRQP 10
KR+ EL R+P
Sbjct: 23 KRKRELGREP 32


>sp|RS8E_PYRHO|SMALL ribosomal subunit protein eS8|Pyrococcus horikoshii (strain ATCC

Query: 1 KRREELSRQP 10
KR+ EL R+P
Sbjct: 23 KRKRELGREP 32


>sp|RS8E_THEVO|SMALL ribosomal subunit protein eS8|Thermoplasma volcanium (strain ATCC

Query: 1 KRREELSRQP 10
KRR EL R+P
Sbjct: 23 KRRFELGREP 32


>sp|RS8E_METTP|SMALL ribosomal subunit protein eS8|Methanothrix thermoacetophila

Query: 1 KRREELSRQP 10
KR+ EL R+P
Sbjct: 22 KRKYELGREP 31


>sp|RS8E_THEAC|SMALL ribosomal subunit protein eS8|Thermoplasma acidophilum (strain

Query: 1 KRREELSRQP 10
KRR EL R+P
Sbjct: 23 KRRFELGREP 32


>sp|RAD50_METKA|DNA double-strand break repair Rad50|Methanopyrus kandleri (strain AV19

Query: 1 KRREELSRQ 9
KRREEL +Q
Sbjct: 689 KRREELKKQ 697


>sp|Y1066_METJA|UNCHARACTERIZED protein MJ1066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KRREELSR 8
KRREE+++
Sbjct: 261 KRREEIAK 268


>sp|RS8E_HALLT|SMALL ribosomal subunit protein eS8|Halorubrum lacusprofundi (strain

Query: 1 KRREELSRQP 10
K+R +L R+P
Sbjct: 22 KKRHQLGREP 31


>sp|RS8E_HALWD|SMALL ribosomal subunit protein eS8|Haloquadratum walsbyi (strain DSM

Query: 1 KRREELSRQP 10
K+R +L R+P
Sbjct: 22 KKRHQLGREP 31


>sp|PURL_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanopyrus kandleri (strain AV19 /

Query: 3 REELSRQP 10
REEL R P
Sbjct: 12 REELGRDP 19


>sp|HDRC2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 1 KRREELSRQP 10
K+REEL P
Sbjct: 121 KKREELGLDP 130




702|Sequence|3506|3515|LSRQPRDFGD

>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RQPRDFGD 10
R+P+ FGD
Sbjct: 114 RKPKTFGD 121


>sp|THS_METKA|THERMOSOME subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 LSRQPRDFGD 10
++RQ RDF D
Sbjct: 420 VARQLRDFAD 429


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 RQPRDFGD 10
RQP+ GD
Sbjct: 155 RQPKTLGD 162


>sp|AATB_METAR|A-TYPE ATP synthase subunit B|Methanocella arvoryzae (strain DSM 22066

Query: 3 RQPRDF 8
RQP+DF
Sbjct: 120 RQPKDF 125


>sp|GLCDH_METS5|GLUCOSE 1-dehydrogenase|Metallosphaera sedula (strain ATCC 51363

Query: 1 LSRQPRDFGD 10
L R PR+ GD
Sbjct: 134 LVRVPRELGD 143


>sp|AMPA_CENSY|PROBABLE cytosol aminopeptidase|Cenarchaeum symbiosum (strain A)

Query: 1 LSRQPRDFG 9
L+RQ RD G
Sbjct: 91 LARQVRDMG 99


>sp|AATD_SULTO|A-TYPE ATP synthase subunit D|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SRQPRDFGD 10
S QP+ FGD
Sbjct: 112 SIQPQPFGD 120




703|Sequence|3511|3520|RDFGDSLARG

>sp|CFBD_METTH|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanothermobacter

Query: 2 DFGDSLAR 9
DFGD+L R
Sbjct: 346 DFGDALRR 353


>sp|RL22_METB6|LARGE ribosomal subunit protein uL22|Methanoregula boonei (strain DSM

Query: 4 GDSLARG 10
GD+LARG
Sbjct: 12 GDNLARG 18


>sp|CHEB1_METMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina

Query: 2 DFGDSLAR 9
+FGDS+ R
Sbjct: 3 EFGDSMIR 10


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 1 RDFGDSLARG 10
RD+G +A+G
Sbjct: 471 RDYGSRVAKG 480


>sp|PGK_HALSA|PHOSPHOGLYCERATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 RDFGDSLARG 10
RD+G +AR
Sbjct: 251 RDYGTEIARA 260


>sp|PGK_HALS3|PHOSPHOGLYCERATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 RDFGDSLARG 10
RD+G +AR
Sbjct: 251 RDYGTEIARA 260




704|Sequence|3516|3525|SLARGGKGFL

>sp|PURP2_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 2|Methanosarcina mazei (strain ATCC

Query: 3 ARGGKGFL 10
A+GGKGF
Sbjct: 159 AKGGKGFF 166


>sp|PURP_METAC|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina acetivorans (strain ATCC

Query: 3 ARGGKGFL 10
A+GGKGF
Sbjct: 159 AKGGKGFF 166


>sp|PURP1_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 1|Methanosarcina mazei (strain ATCC

Query: 3 ARGGKGFL 10
A+GGKGF
Sbjct: 159 AKGGKGFF 166


>sp|PURP_METBF|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 3 ARGGKGFL 10
A+GGKGF
Sbjct: 159 AKGGKGFF 166


>sp|PURP_METTP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothrix thermoacetophila (strain

Query: 3 ARGGKGFL 10
A+GGKGF
Sbjct: 159 AKGGKGFF 166


>sp|PURP_METTH|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothermobacter thermautotrophicus

Query: 3 ARGGKGFL 10
ARGG+G+
Sbjct: 162 ARGGRGYF 169


>sp|PURP_METS3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanobrevibacter smithii (strain ATCC

Query: 3 ARGGKGFL 10
ARGG+G+
Sbjct: 162 ARGGRGYF 169


>sp|PURP_METKA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanopyrus kandleri (strain AV19 /

Query: 3 ARGGKGFL 10
ARGG+G+
Sbjct: 160 ARGGRGYF 167


>sp|PURP_METJA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanocaldococcus jannaschii (strain

Query: 3 ARGGKGFL 10
ARGG+G+
Sbjct: 160 ARGGRGYF 167


>sp|PURP_META3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus aeolicus (strain ATCC

Query: 3 ARGGKGFL 10
ARGG+G+
Sbjct: 160 ARGGRGYF 167


>sp|SYFB_METVS|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus vannielii (strain ATCC 35089

Query: 2 LARGGKGFL 10
LARG +GF+
Sbjct: 69 LARGFRGFM 77


>sp|SYFB_METMP|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain DSM 14266

Query: 2 LARGGKGFL 10
LARG +GF+
Sbjct: 69 LARGFRGFM 77


>sp|SYFB_METM7|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C7 /

Query: 2 LARGGKGFL 10
LARG +GF+
Sbjct: 69 LARGFRGFM 77


>sp|SYFB_METM6|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C6 /

Query: 2 LARGGKGFL 10
LARG +GF+
Sbjct: 69 LARGFRGFM 77


>sp|SYFB_METM5|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C5 /

Query: 2 LARGGKGFL 10
LARG +GF+
Sbjct: 69 LARGFRGFM 77


>sp|PURP_METVS|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus vannielii (strain ATCC

Query: 3 ARGGKGFL 10
ARGG+G+
Sbjct: 160 ARGGRGYF 167


>sp|PURP_METMP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain DSM

Query: 3 ARGGKGFL 10
ARGG+G+
Sbjct: 160 ARGGRGYF 167


>sp|PURP_METAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanocella arvoryzae (strain DSM

Query: 3 ARGGKGFL 10
ARGG+G+
Sbjct: 164 ARGGRGYF 171


>sp|PURP_METBU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcoides burtonii (strain DSM

Query: 3 ARGGKGFL 10
A+GG+GF
Sbjct: 158 AKGGRGFF 165


>sp|SYFB_META3|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LARGGKGFL 10
LARG +GF+
Sbjct: 64 LARGFRGFI 72


>sp|PURP_METM7|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C7 /

Query: 3 ARGGKGFL 10
ARGG+G+
Sbjct: 160 ARGGRGYF 167


>sp|PURP_METM5|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C5 /

Query: 3 ARGGKGFL 10
ARGG+G+
Sbjct: 160 ARGGRGYF 167


>sp|PURP_METST|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosphaera stadtmanae (strain ATCC

Query: 3 ARGGKGFL 10
ARGG+G+
Sbjct: 162 ARGGQGYF 169


>sp|PURP_SULTO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfurisphaera tokodaii (strain DSM

Query: 3 ARGGKGFL 10
A+GGKG+
Sbjct: 138 AKGGKGYF 145


>sp|PURP_SACS2|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Saccharolobus solfataricus (strain ATCC

Query: 3 ARGGKGFL 10
A+GGKG+
Sbjct: 138 AKGGKGYF 145


>sp|PURP_PYRFU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 ARGGKGFL 10
A+GGKG+
Sbjct: 136 AKGGKGYF 143


>sp|PURP_METM6|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C6 /

Query: 3 ARGGKGFL 10
ARGG+G+
Sbjct: 160 ARGGRGYF 167


>sp|PURP_SULAC|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfolobus acidocaldarius (strain ATCC

Query: 3 ARGGKGFL 10
A+GGKG+
Sbjct: 139 AKGGKGYF 146


>sp|DMRX_METJA|DIHYDROMETHANOPTERIN reductase (acceptor)|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SLARGGKGFL 10
++A+ GKGF+
Sbjct: 123 AIAQAGKGFV 132


>sp|PURP_KORCO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 ARGGKGFL 10
A+GGKG+
Sbjct: 162 AKGGKGYF 169


>sp|PURP_ARCFU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Archaeoglobus fulgidus (strain ATCC

Query: 3 ARGGKGFL 10
A+GGKG+
Sbjct: 158 AKGGKGYF 165


>sp|MTNA_AERPE|PUTATIVE methylthioribose-1-phosphate isomerase|Aeropyrum pernix (strain

Query: 3 ARGGKGFL 10
+RGG+GF+
Sbjct: 88 SRGGEGFI 95


>sp|HELS_HALMA|ATP-DEPENDENT DNA helicase Hel308|Haloarcula marismortui (strain ATCC 43049

Query: 1 SLARGGKGF 9
S+ARGGK
Sbjct: 64 SVARGGKAL 72


>sp|HIS2_METS5|PHOSPHORIBOSYL-ATP pyrophosphatase|Metallosphaera sedula (strain ATCC 51363

Query: 1 SLARGGKGFL 10
SLA+ GKG++
Sbjct: 27 SLAKKGKGYV 36


>sp|GYRA_HALWD|DNA gyrase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SLARGGKGFL 10
S RGGKG +
Sbjct: 543 SQHRGGKGII 552


>sp|COBS_HALWD|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SLARGGKGFL 10
S RGG GFL
Sbjct: 4 SAIRGGIGFL 13


>sp|GYRA_HALL2|DNA gyrase subunit A|Haloferax lucentense (strain DSM 14919

Query: 4 RGGKGFL 10
RGGKG +
Sbjct: 546 RGGKGII 552


>sp|XERA_THEON|TYROSINE recombinase XerA|Thermococcus onnurineus (strain NA1)

Query: 2 LARGGKG 8
+ RGGKG
Sbjct: 152 IVRGGKG 158


>sp|XERA_PYRHO|TYROSINE recombinase XerA|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LARGGKG 8
+ RGGKG
Sbjct: 155 IVRGGKG 161


>sp|FNO_ARCFU|F420-DEPENDENT NADP reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LARGGKGF 9
++RG KGF
Sbjct: 100 VSRGAKGF 107




705|Sequence|3521|3530|GKGFLRGVVG

>sp|Y3591_METAC|PROTEIN MA_3591|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KGFLRGVVG 10
KG LRG +G
Sbjct: 54 KGMLRGCIG 62


>sp|TFE_METMA|TRANSCRIPTION factor E|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KGFLRGVVG 10
+G+LR +VG
Sbjct: 10 RGYLRSLVG 18


>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 1 GKGFLRGVV 9
G+ FLRG+V
Sbjct: 460 GEEFLRGLV 468


>sp|SAHH_THEVO|ADENOSYLHOMOCYSTEINASE volcanium (strain ATCC 51530

Query: 1 GKGFLR 6
GKGFLR
Sbjct: 4 GKGFLR 9


>sp|CSG_METAC|MAJOR S-layer protein|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GKGFLRGVVG 10
G GF+ G+VG
Sbjct: 650 GFGFMFGLVG 659


>sp|IF6_PYRAE|TRANSLATION initiation factor 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GKGFLRG 7
GK FLRG
Sbjct: 186 GKSFLRG 192


>sp|CDC6C_HALMA|ORC1-TYPE DNA replication protein 3|Haloarcula marismortui (strain ATCC 43049

Query: 2 KGFLRGVVG 10
+GF GVVG
Sbjct: 224 RGFNEGVVG 232


>sp|IF6_PYRAR|TRANSLATION initiation factor 6|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GKGFLRG 7
GK FLRG
Sbjct: 186 GKSFLRG 192


>sp|Y794_METJA|UNCHARACTERIZED protein MJ0794|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GKGFLRGVVG 10
G GFL +VG
Sbjct: 111 GYGFLPNIVG 120


>sp|DP2S_ARCFU|DNA polymerase II small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 GKGFLRGV 8
G GF RGV
Sbjct: 437 GTGFYRGV 444


>sp|Y2543_HALSA|PROTEIN VNG_2543C|Halobacterium salinarum (strain ATCC 700922

Query: 1 GKGFLRGVVG 10
G+G LRG G
Sbjct: 59 GRGRLRGCAG 68


>sp|SYR_KORCO|ARGININE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GKGFLRGVVG 10
G+G +GVVG
Sbjct: 113 GRGERKGVVG 122


>sp|Y718_METJA|UNCHARACTERIZED transporter MJ0718|Methanocaldococcus jannaschii (strain ATCC

Query: 4 FLRGVVG 10
+LRG+VG
Sbjct: 88 YLRGIVG 94


>sp|TRPG_THEKO|ANTHRANILATE synthase component 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GKGFLRGV 8
GKG LRG+
Sbjct: 109 GKGVLRGI 116




706|Sequence|3526|3535|RGVVGGVTGI

>sp|SYP_METMJ|PROLINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 RGVVGGVTGI 10
RGVV G+T +
Sbjct: 375 RGVVEGITSV 384


>sp|NIFD_METTL|NITROGENASE molybdenum-iron protein alpha chain|Methanothermococcus

Query: 1 RGVVGG 6
RGVVGG
Sbjct: 52 RGVVGG 57


>sp|COX1_HALSA|CYTOCHROME c oxidase polypeptide 1|Halobacterium salinarum (strain ATCC 700922

Query: 3 VVGGVTGI 10
++GGVTG+
Sbjct: 402 IIGGVTGV 409


>sp|Y1546_ARCFU|UNCHARACTERIZED MscS family protein AF_1546|Archaeoglobus fulgidus (strain ATCC

Query: 3 VVGGVTGI 10
V GG+TGI
Sbjct: 87 VAGGITGI 94


>sp|PYRC_AERPE|DIHYDROOROTASE pernix (strain ATCC 700893

Query: 2 GVVGGVTGI 10
GV GG TG+
Sbjct: 410 GVRGGATGV 418


>sp|Y1017_METJA|UNCHARACTERIZED protein MJ1017|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VGGVTG 9
VGG+TG
Sbjct: 8 VGGITG 13


>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 4 VGGVTG 9
+GGVTG
Sbjct: 382 IGGVTG 387


>sp|SYFB_METJA|PHENYLALANINE--TRNA ligase beta subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RGVVGGVTGI 10
RG++G TG+
Sbjct: 69 RGIIGIETGL 78


>sp|Y106_METJA|UNCHARACTERIZED protein MJ0106|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GVVGGVTG 9
GVVGG+ G
Sbjct: 148 GVVGGMGG 155


>sp|PURQ_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanopyrus kandleri (strain AV19 /

Query: 2 GVVGGVTGI 10
G VGG+TG+
Sbjct: 178 GSVGGITGV 186


>sp|PURL_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RGVVGGV 7
+GVVGG+
Sbjct: 167 QGVVGGI 173




707|Sequence|3531|3540|GVTGIITKPV

>sp|PRIS_HYPBU|DNA primase small subunit PriS|Hyperthermus butylicus (strain DSM 5456

Query: 1 GVTGIITKPV 10
G TG++ KPV
Sbjct: 301 GKTGLLVKPV 310


>sp|PRIS_METJA|DNA primase small subunit PriS|Methanocaldococcus jannaschii (strain

Query: 1 GVTGIITKPV 10
G TG I KP+
Sbjct: 270 GYTGFIVKPL 279


>sp|FTSZ_METTH|CELL division protein FtsZ|Methanothermobacter thermautotrophicus

Query: 1 GVTGIITKP 9
G+T +ITKP
Sbjct: 222 GITELITKP 230


>sp|FTSZ1_PYRAB|CELL division protein FtsZ 1|Pyrococcus abyssi (strain GE5 /

Query: 1 GVTGIITKP 9
G+T +ITKP
Sbjct: 225 GITELITKP 233


>sp|FTSZ1_PYRWO|CELL division protein FtsZ 1|Pyrococcus woesei

Query: 1 GVTGIITKP 9
G+T +ITKP
Sbjct: 219 GITELITKP 227


>sp|FTSZ1_PYRHO|CELL division protein FtsZ 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GVTGIITKP 9
G+T +ITKP
Sbjct: 225 GITELITKP 233


>sp|FTSZ1_PYRFU|CELL division protein FtsZ 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GVTGIITKP 9
G+T +ITKP
Sbjct: 225 GITELITKP 233


>sp|FILI_METH6|METHANOGENESIS regulatory histidine kinase FilI|Methanothrix harundinacea (strain

Query: 1 GVTGIITKP 9
G+TGI++ P
Sbjct: 149 GLTGIVSDP 157


>sp|FTSZ1_ARCFU|CELL division protein FtsZ 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GVTGIITKP 9
G+T +ITKP
Sbjct: 226 GITELITKP 234


>sp|Y1059_METJA|UNCHARACTERIZED glycosyltransferase MJ1059|Methanocaldococcus jannaschii (strain

Query: 1 GVTGIITKP 9
G GI+TKP
Sbjct: 332 GKYGILTKP 340


>sp|FTSZ1_HALVD|CELL division protein FtsZ 1|Haloferax volcanii (strain ATCC 29605

Query: 1 GVTGIITKP 9
G+T +ITKP
Sbjct: 233 GITELITKP 241


>sp|FTSZ1_THEKO|CELL division protein FtsZ 1|Thermococcus kodakarensis (strain ATCC

Query: 1 GVTGIITKP 9
G+T +ITKP
Sbjct: 225 GITELITKP 233


>sp|FTSZ_HALMT|CELL division protein FtsZ|Haloferax mediterranei (strain ATCC 33500

Query: 1 GVTGIITKP 9
G+T +ITKP
Sbjct: 231 GITELITKP 239


>sp|FTSZ1_HALSA|CELL division protein FtsZ 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 GVTGIITKP 9
G+T +ITKP
Sbjct: 235 GITELITKP 243


>sp|FTSZ1_HALS3|CELL division protein FtsZ 1|Halobacterium salinarum (strain ATCC 29341

Query: 1 GVTGIITKP 9
G+T +ITKP
Sbjct: 235 GITELITKP 243


>sp|THIDN_METJA|BIFUNCTIONAL thiamine biosynthesis protein ThiDN|Methanocaldococcus jannaschii

Query: 3 TGIITKP 9
TG++TKP
Sbjct: 75 TGVLTKP 81


>sp|EF2_IGNH4|ELONGATION factor 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GVTGIITK 8
VTG+ITK
Sbjct: 649 AVTGVITK 656


>sp|THIM_CALMQ|HYDROXYETHYLTHIAZOLE kinase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 GVTGIITKP 9
GVT +IT P
Sbjct: 160 GVTAVITGP 168




708|Sequence|3536|3545|ITKPVEGAKK

>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ITKPVEGAKK 10
ITKPVE ++K
Sbjct: 422 ITKPVEASEK 431


>sp|MCRZ_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 1 ITKPVEGAKK 10
I +P+EGAK+
Sbjct: 72 IVEPIEGAKQ 81


>sp|DHYS1_METAC|PROBABLE deoxyhypusine synthase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 ITKPVEGAK 9
+T PV+GAK
Sbjct: 10 LTTPVKGAK 18


>sp|DHYS_METTE|PROBABLE deoxyhypusine synthase|Methanosarcina thermophila

Query: 1 ITKPVEGAK 9
+T PV+GAK
Sbjct: 10 LTTPVKGAK 18


>sp|SYM_HALMA|METHIONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 KPVEGAKK 10
+PVEGA K
Sbjct: 634 EPVEGADK 641


>sp|SPT5_METJA|TRANSCRIPTION elongation factor Spt5|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ITKPVEGAK 9
IT PVEG K
Sbjct: 132 ITLPVEGVK 140


>sp|SPSS_METM5|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain C5 /

Query: 1 ITKPVEGAKK 10
IT+P GA++
Sbjct: 79 ITRPTHGARE 88


>sp|SPSS_METM7|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain C7 /

Query: 1 ITKPVEGAKK 10
IT+P GA++
Sbjct: 79 ITRPTHGARE 88


>sp|HYPA_METKA|HYDROGENASE maturation factor HypA|Methanopyrus kandleri (strain AV19 /

Query: 4 PVEGAK 9
PVEGAK
Sbjct: 56 PVEGAK 61


>sp|SPSS_METVS|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ITKPVEGAKK 10
IT+P GA++
Sbjct: 79 ITRPTHGARE 88


>sp|MCRZ_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ITKPVEGAKK 10
I +P++GAK+
Sbjct: 72 IVEPIQGAKE 81


>sp|LYSX_SULTO|ALPHA-AMINOADIPATE--LYSW ligase LysX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ITKPVEGA 8
+ KPVEG+
Sbjct: 129 VIKPVEGS 136


>sp|LYSX_SACS2|ALPHA-AMINOADIPATE--LYSW ligase LysX|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ITKPVEGA 8
+ KPVEG+
Sbjct: 119 VIKPVEGS 126


>sp|SPSS_METMP|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ITKPVEGAKK 10
IT+P GA++
Sbjct: 79 ITRPTHGARE 88


>sp|SPSS_METM6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain C6 /

Query: 1 ITKPVEGAKK 10
IT+P GA++
Sbjct: 79 ITRPTHGARE 88


>sp|MCRG_METFE|METHYL-COENZYME M reductase subunit gamma|Methanothermus fervidus

Query: 1 ITKPVEGAK 9
I +P EGAK
Sbjct: 69 IVEPTEGAK 77




709|Sequence|3541|3550|EGAKKEGAAG

>sp|Y1487_ARCFU|UNCHARACTERIZED protein AF_1487|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EGAKKEG 7
EGAKKEG
Sbjct: 57 EGAKKEG 63


>sp|PURP_SULAC|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfolobus acidocaldarius (strain

Query: 2 GAKKEG 7
GAKKEG
Sbjct: 18 GAKKEG 23


>sp|PURP_IGNH4|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Ignicoccus hospitalis (strain KIN4/I

Query: 2 GAKKEG 7
GAKKEG
Sbjct: 31 GAKKEG 36


>sp|PURP_SACS2|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Saccharolobus solfataricus (strain

Query: 2 GAKKEG 7
GAKKEG
Sbjct: 17 GAKKEG 22


>sp|PURP_SULTO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfurisphaera tokodaii (strain DSM

Query: 2 GAKKEG 7
GAKKEG
Sbjct: 17 GAKKEG 22


>sp|SYT_METS3|THREONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 EGAKKEGA 8
E AKK+GA
Sbjct: 26 EDAKKQGA 33


>sp|PRIS_METB6|DNA primase small subunit PriS|Methanoregula boonei (strain DSM 21154

Query: 1 EGAKKEGAAG 10
EG KE AAG
Sbjct: 223 EGVGKESAAG 232


>sp|THII_METMA|PROBABLE tRNA sulfurtransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EGAKKEGAAG 10
E KKEGA+G
Sbjct: 294 EIMKKEGASG 303


>sp|ASSY_METMA|ARGININOSUCCINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EGAKKEGA 8
E AKKEGA
Sbjct: 103 EAAKKEGA 110


>sp|PURP2_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 2|Methanosarcina mazei (strain ATCC

Query: 1 EGAKKEG 7
+GA+KEG
Sbjct: 34 DGARKEG 40


>sp|RS6E_METAR|SMALL ribosomal subunit protein eS6|Methanocella arvoryzae (strain DSM

Query: 4 KKEGAAG 10
KKEGAAG
Sbjct: 129 KKEGAAG 135




710|Sequence|3546|3555|EGAAGFFKGI

>sp|GCSPB_HALSA|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 2 GAAGFFKGI 10
GAAG F GI
Sbjct: 137 GAAGEFTGI 145


>sp|CBIA_METVS|COBYRINATE a,c-diamide synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EGAAGFFKGI 10
EG G F+GI
Sbjct: 85 EGVRGLFEGI 94


>sp|CBIA_METST|COBYRINATE a,c-diamide synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 EGAAGFFKGI 10
EG G ++GI
Sbjct: 87 EGVRGLYEGI 96


>sp|Y3100_HALMA|PUTATIVE heme-binding protein rrnAC3100|Haloarcula marismortui (strain ATCC

Query: 1 EGAAGFFKGI 10
E AAGF K I
Sbjct: 435 ETAAGFLKDI 444


>sp|CBIA_METS3|COBYRINATE a,c-diamide synthase|Methanobrevibacter smithii (strain ATCC

Query: 1 EGAAGFFKGI 10
EG G ++GI
Sbjct: 84 EGVRGLYEGI 93


>sp|PRIS_METB6|DNA primase small subunit PriS|Methanoregula boonei (strain DSM 21154

Query: 1 EGAAGFFK 8
E AAGF K
Sbjct: 228 ESAAGFLK 235


>sp|CBIA_METM5|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C5 /

Query: 1 EGAAGFFKGI 10
EG G ++GI
Sbjct: 85 EGVRGLYEGI 94


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 1 EGAAGFFK 8
EGAAGF +
Sbjct: 568 EGAAGFLE 575


>sp|CHEB1_METMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina mazei

Query: 1 EGAAGFFK 8
+GAAGF K
Sbjct: 295 DGAAGFKK 302




711|Sequence|3551|3560|FFKGIGKGLV

>sp|RS15_SACS2|SMALL ribosomal subunit protein uS15|Saccharolobus solfataricus (strain

Query: 1 FFKGIGK 7
++KGIGK
Sbjct: 126 YYKGIGK 132


>sp|WECC_PYRHO|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 FKGIGKGLV 10
F+GIG+G V
Sbjct: 410 FRGIGRGDV 418


>sp|DNAJ_THEAC|CHAPERONE protein DnaJ|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FFKGIGKG 8
FF G G+G
Sbjct: 108 FFSGFGRG 115


>sp|TRUB_METJA|PROBABLE tRNA pseudouridine synthase B|Methanocaldococcus jannaschii (strain

Query: 3 KGIGKG 8
KGIGKG
Sbjct: 277 KGIGKG 282


>sp|G3P_HALMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 4 GIGKGLV 10
G+G+GLV
Sbjct: 333 GVGRGLV 339


>sp|PDAD_PICTO|PYRUVOYL-DEPENDENT arginine decarboxylase|Picrophilus torridus (strain ATCC 700027

Query: 1 FFKGIGKG 8
F +GIG+G
Sbjct: 11 FTRGIGRG 18


>sp|PCNA2_PYRAE|DNA polymerase sliding clamp 2|Pyrobaculum aerophilum (strain ATCC

Query: 1 FFKGIGKG 8
F+G+G+G
Sbjct: 172 LFRGVGEG 179


>sp|Y709_METJA|UNCHARACTERIZED transporter MJ0709|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FKGIGKG 8
F+GIGKG
Sbjct: 381 FQGIGKG 387


>sp|PUS10_ACIS3|TRNA pseudouridine synthase Pus10|Acidilobus saccharovorans (strain

Query: 1 FFKGIGKGL 9
F G+G+GL
Sbjct: 26 LFAGLGRGL 34


>sp|GUAAA_METST|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosphaera

Query: 1 FFKGIGKGL 9
FKGIG L
Sbjct: 111 LFKGIGDSL 119


>sp|PDAD_METKA|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanopyrus kandleri (strain AV19 /

Query: 3 KGIGKGLV 10
K +G+GLV
Sbjct: 68 KAVGRGLV 75


>sp|DNLI_METTP|DNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 GIGKGLV 10
G+G+GLV
Sbjct: 167 GVGEGLV 173


>sp|PYRG_PYRAE|CTP synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 GIGKGLV 10
G+GKG+V
Sbjct: 14 GVGKGVV 20


>sp|PYRG_PYRCJ|CTP synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 GIGKGLV 10
G+GKG+V
Sbjct: 14 GLGKGVV 20




712|Sequence|3556|3565|GKGLVGAVAR

>sp|TIAS_ARCFU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Archaeoglobus fulgidus (strain

Query: 1 GKGLVGAVA 9
G+GL+GA+A
Sbjct: 139 GRGLIGALA 147


>sp|TIAS_METAC|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina acetivorans

Query: 1 GKGLVGAVA 9
G+GL+GA+A
Sbjct: 140 GRGLIGALA 148


>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GKGLVGAVAR 10
G GLVG+V R
Sbjct: 427 GPGLVGSVVR 436


>sp|TIAS_METMA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina mazei (strain

Query: 1 GKGLVGAVA 9
G+GL+GA+A
Sbjct: 140 GRGLIGALA 148


>sp|TIAS_METLZ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocorpusculum labreanum

Query: 1 GKGLVGAVA 9
G+GL+GA+A
Sbjct: 142 GRGLIGALA 150


>sp|HIS3_METBU|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GKGLVGAVAR 10
G GL+GA+A+
Sbjct: 11 GNGLIGAIAQ 20


>sp|TIAS_IGNAA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignisphaera aggregans (strain

Query: 1 GKGLVGAVA 9
G+G+VGA A
Sbjct: 159 GRGIVGAAA 167


>sp|TIAS_METKA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanopyrus kandleri (strain

Query: 1 GKGLVGAVA 9
G+G+VGAVA
Sbjct: 135 GRGIVGAVA 143


>sp|TMCA_AERPE|TRNA(MET) cytidine acetyltransferase TmcA|Aeropyrum pernix (strain ATCC

Query: 2 KGLVGAVAR 10
GLVGAVAR
Sbjct: 661 PGLVGAVAR 669


>sp|TIAS_THESM|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus sibiricus (strain

Query: 1 GKGLVGAVA 9
G+G++GA+A
Sbjct: 141 GRGIIGALA 149


>sp|TIAS_PYRHO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrococcus horikoshii (strain

Query: 1 GKGLVGAVA 9
G+G++GA+A
Sbjct: 140 GRGIIGALA 148


>sp|TIAS_THEGJ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus gammatolerans

Query: 1 GKGLVGAVA 9
G+G++GA+A
Sbjct: 140 GRGIIGALA 148


>sp|HEM3_CALMQ|PROBABLE porphobilinogen deaminase|Caldivirga maquilingensis (strain ATCC

Query: 1 GKGLVGAVAR 10
G+G++G VAR
Sbjct: 193 GQGIIGVVAR 202


>sp|TIAS_CALMQ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Caldivirga maquilingensis

Query: 1 GKGLVGAVA 9
G+G++GA+A
Sbjct: 134 GRGVIGALA 142


>sp|HEM3_PYRNV|PROBABLE porphobilinogen deaminase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GKGLVGAVAR 10
G+G+V AVAR
Sbjct: 196 GQGIVAAVAR 205


>sp|Y106_METJA|UNCHARACTERIZED protein MJ0106|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GKGLVGAVA 9
G GLVG++A
Sbjct: 26 GTGLVGSIA 34


>sp|AATE_PYRNV|A-TYPE ATP synthase subunit E|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 KGLVGAVAR 10
KG+V AVAR
Sbjct: 128 KGVVEAVAR 136


>sp|TIAS_HYPBU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Hyperthermus butylicus (strain

Query: 2 KGLVGAVA 9
+GLVGA+A
Sbjct: 167 RGLVGALA 174


>sp|TIAS_THEPD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermofilum pendens (strain DSM

Query: 2 KGLVGAVA 9
+GLVGAVA
Sbjct: 149 RGLVGAVA 156


>sp|RL3_METLZ|LARGE ribosomal subunit protein uL3|Methanocorpusculum labreanum (strain

Query: 1 GKGLVGAVAR 10
GKG GAV R
Sbjct: 203 GKGFQGAVKR 212


>sp|TIAS_METJA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocaldococcus jannaschii

Query: 1 GKGLVGAVA 9
G+G++GA+
Sbjct: 147 GRGIIGALG 155


>sp|PYRG_AERPE|CTP synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 KGLVGAVAR 10
KG V AVAR
Sbjct: 527 KGFVTAVAR 535




713|Sequence|3561|3570|GAVARPTGGI

>sp|RS27_THEAC|SMALL ribosomal subunit protein eS27|Thermoplasma acidophilum (strain

Query: 3 VARPTGGI 10
+A+PTGGI
Sbjct: 47 IAKPTGGI 54


>sp|RS27_HALMA|SMALL ribosomal subunit protein eS27|Haloarcula marismortui (strain

Query: 3 VARPTGG 9
+ARPTGG
Sbjct: 36 IARPTGG 42


>sp|SYT_METB6|THREONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 AVARPTGG 9
VA PTGG
Sbjct: 188 GVAEPTGG 195


>sp|RS27_ARCFU|SMALL ribosomal subunit protein eS27|Archaeoglobus fulgidus (strain

Query: 3 VARPTGG 9
VA PTGG
Sbjct: 36 VAEPTGG 42


>sp|RS27_METKA|SMALL ribosomal subunit protein eS27|Methanopyrus kandleri (strain AV19

Query: 3 VARPTGG 9
+A+PTGG
Sbjct: 54 LAKPTGG 60


>sp|RS27_THEVO|SMALL ribosomal subunit protein eS27|Thermoplasma volcanium (strain

Query: 1 GAVARPTGGI 10
+A+PTGG+
Sbjct: 45 ATIAKPTGGV 54


>sp|RS27_HALSA|SMALL ribosomal subunit protein eS27|Halobacterium salinarum (strain

Query: 3 VARPTGG 9
+ARPTGG
Sbjct: 36 LARPTGG 42


>sp|RS27_HALS3|SMALL ribosomal subunit protein eS27|Halobacterium salinarum (strain

Query: 3 VARPTGG 9
+ARPTGG
Sbjct: 36 LARPTGG 42


>sp|RS8_STAMF|SMALL ribosomal subunit protein uS8|Staphylothermus marinus (strain ATCC

Query: 2 AVARPTGGI 10
A+A+ TGG+
Sbjct: 119 AIAKKTGGV 127


>sp|MTMB1_METBA|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri

Query: 1 GAVARPTGGI 10
G VAR T G+
Sbjct: 387 GEVARATAGV 396


>sp|MTMB2_METBA|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri

Query: 1 GAVARPTGGI 10
G VAR T G+
Sbjct: 387 GEVARATAGV 396


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 1 GAVARPTGGI 10
G VAR T G+
Sbjct: 387 GEVARATAGV 396


>sp|MTMB3_METBF|MONOMETHYLAMINE methyltransferase MtmB3|Methanosarcina barkeri (strain Fusaro /

Query: 1 GAVARPTGGI 10
G VAR T G+
Sbjct: 387 GEVARATAGV 396


>sp|MTMB2_METBF|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri (strain Fusaro /

Query: 1 GAVARPTGGI 10
G VAR T G+
Sbjct: 387 GEVARATAGV 396


>sp|MTMB1_METBF|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri (strain Fusaro /

Query: 1 GAVARPTGGI 10
G VAR T G+
Sbjct: 387 GEVARATAGV 396




714|Sequence|3566|3575|PTGGIVDMAS

>sp|HIS8_METTH|HISTIDINOL-PHOSPHATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 PTGGIVD 7
PTGG++D
Sbjct: 176 PTGGLID 182


>sp|HIS8_META3|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PTGGIVD 7
PTG I+D
Sbjct: 173 PTGNIID 179


>sp|PC2DH_METJA|PUTATIVE precorrin-2 dehydrogenase|Methanocaldococcus jannaschii (strain

Query: 2 TGGIVDMAS 10
+GGIVD+ S
Sbjct: 32 SGGIVDIYS 40


>sp|ADEC_STAMF|ADENINE deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 1 PTGGIVDMAS 10
PTG I+D AS
Sbjct: 40 PTGEILDNAS 49


>sp|AROA_THEAC|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 4 GIVDMAS 10
GI+DMAS
Sbjct: 327 GIIDMAS 333


>sp|ADHS_METTH|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PTGGIVDMA 9
P GI+DMA
Sbjct: 32 PVRGIIDMA 40


>sp|MVK_METTH|MEVALONATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PTGGIVD 7
P+GGI+D
Sbjct: 60 PSGGILD 66


>sp|CHEB_ARCFU|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Archaeoglobus fulgidus

Query: 1 PTGGIVDMAS 10
P G +VD++S
Sbjct: 104 PDGALVDLSS 113


>sp|PRNK_THEKO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase TK1956|Thermococcus kodakarensis (strain ATCC

Query: 1 PTGGIVDMA 9
P GG++++A
Sbjct: 174 PYGGVIELA 182


>sp|ILVD_METMA|DIHYDROXY-ACID dehydratase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TGGIVD 7
TGGIVD
Sbjct: 548 TGGIVD 553


>sp|Y1297_METTP|UPF0280 protein Mthe_1297|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PTGGIVDMAS 10
PTGGI+ + S
Sbjct: 139 PTGGILGVCS 148


>sp|ILVD_METBF|DIHYDROXY-ACID dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 2 TGGIVD 7
TGGIVD
Sbjct: 548 TGGIVD 553


>sp|ILVD2_METAC|DIHYDROXY-ACID dehydratase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TGGIVD 7
TGGIVD
Sbjct: 548 TGGIVD 553


>sp|ILVD1_METAC|DIHYDROXY-ACID dehydratase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TGGIVD 7
TGGIVD
Sbjct: 548 TGGIVD 553




715|Sequence|3571|3580|VDMASSTFQG

>sp|CAPPA_PICTO|PHOSPHOENOLPYRUVATE carboxylase|Picrophilus torridus (strain ATCC 700027

Query: 1 VDMASSTFQG 10
V + SSTF+G
Sbjct: 252 VGVGSSTFRG 261




716|Sequence|3576|3585|STFQGIQRAA

>sp|CAPPA_PYRHO|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TFQGIQRAA 10
T QGI RAA
Sbjct: 102 TLQGITRAA 110


>sp|CAPPA_PYRAB|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 2 TFQGIQRAA 10
T QGI RAA
Sbjct: 102 TLQGITRAA 110




717|Sequence|3581|3590|IQRAAESTEE

>sp|THS_METMP|CHAPERONIN subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 IQRAAESTE 9
IQ AAESTE
Sbjct: 499 IQSAAESTE 507


>sp|TOP6B_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IQRAAESTEE 10
+ RAA++TEE
Sbjct: 439 VDRAADATEE 448


>sp|RL5_AERPE|LARGE ribosomal subunit protein uL5|Aeropyrum pernix (strain ATCC

Query: 1 IQRAAESTEE 10
+QRAAE EE
Sbjct: 48 LQRAAEVLEE 57


>sp|TOP6B_HALMA|TYPE 2 DNA topoisomerase 6|Haloarcula marismortui (strain ATCC 43049

Query: 1 IQRAAESTEE 10
I RAA+ TEE
Sbjct: 437 IDRAADMTEE 446




718|Sequence|3586|3595|ESTEEVSSLR

>sp|FLAB1_METJA|FLAGELLIN B1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ESTEEVSS 8
ESTE+V+S
Sbjct: 53 ESTEQVAS 60


>sp|FLAA_METVO|FLAGELLIN A|Methanococcus voltae

Query: 1 ESTEEVSS 8
ESTE+VS+
Sbjct: 53 ESTEQVST 60


>sp|FLAB2_METJA|FLAGELLIN B2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ESTEEVSS 8
ESTE+V+S
Sbjct: 53 ESTEQVAS 60


>sp|FLAB1_METVS|FLAGELLIN B1|Methanococcus vannielii (strain ATCC 35089

Query: 1 ESTEEVSS 8
ESTE+V+S
Sbjct: 53 ESTEQVAS 60




719|Sequence|3591|3600|VSSLRPPRLI

>sp|Y688_METJA|UPF0146 protein MJ0688|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VSSLRPPR 8
+ S+RPPR
Sbjct: 82 IYSIRPPR 89


>sp|PDAD_PICTO|PYRUVOYL-DEPENDENT arginine decarboxylase|Picrophilus torridus (strain ATCC 700027

Query: 1 VSSLRPPR 8
VSS+ PPR
Sbjct: 42 VSSILPPR 49


>sp|APE1_SACS2|PROBABLE aminopeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VSSLRPPRLI 10
+SSLR P ++
Sbjct: 664 ISSLRDPSIV 673


>sp|KPYK_THEAC|PYRUVATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VSSLRPPRLI 10
+SSLRP ++
Sbjct: 367 ISSLRPKAMV 376


>sp|PDAD1_METMA|PYRUVOYL-DEPENDENT arginine decarboxylase 1|Methanosarcina mazei (strain ATCC

Query: 1 VSSLRPPR 8
VSS+ PPR
Sbjct: 43 VSSILPPR 50




720|Sequence|3596|3605|PPRLIHEDGI

>sp|RRP41_METKA|EXOSOME complex component Rrp41|Methanopyrus kandleri (strain AV19 /

Query: 1 PPRLIHEDGI 10
P RLI EDG+
Sbjct: 5 PERLISEDGL 14


>sp|Y083_ARCFU|UNCHARACTERIZED protein AF_0083|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PRLIHEDG 9
PRLIH+ G
Sbjct: 24 PRLIHQTG 31


>sp|PGP_PYRFU|PHOSPHOGLYCOLATE phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PPRLIHEDGI 10
P R+IHE+ +
Sbjct: 17 PNRMIHEEAL 26


>sp|GATE_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma volcanium (strain ATCC

Query: 1 PPRLIHEDGI 10
PP++ +ED I
Sbjct: 82 PPKMPNEDAI 91


>sp|PUR5_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RLIHEDGI 10
+LIHE+G+
Sbjct: 268 KLIHENGV 275


>sp|PUR5_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 RLIHEDGI 10
+LIHE+G+
Sbjct: 268 KLIHENGV 275


>sp|PUR5_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 RLIHEDGI 10
+LIHE+G+
Sbjct: 269 KLIHENGV 276


>sp|PGP_PYRHO|PHOSPHOGLYCOLATE phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PPRLIHEDGI 10
P R+IHE +
Sbjct: 17 PNRMIHEKAL 26


>sp|CFBD_METBF|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina barkeri

Query: 3 RLIHEDGI 10
RL+ EDGI
Sbjct: 45 RLLEEDGI 52


>sp|CFBD_METAC|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina acetivorans

Query: 2 PRLIHEDGI 10
RL+ EDGI
Sbjct: 44 ARLLEEDGI 52


>sp|PDXT_HALMA|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Haloarcula marismortui (strain

Query: 3 RLIHEDGI 10
RLIH +GI
Sbjct: 61 RLIHREGI 68


>sp|PGP_PYRAB|PHOSPHOGLYCOLATE phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 1 PPRLIHEDGI 10
P R+IHE +
Sbjct: 17 PNRMIHEKAL 26


>sp|PUR5_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 RLIHEDGI 10
RLI+E+G+
Sbjct: 269 RLIYENGV 276


>sp|AATI_METJA|A-TYPE ATP synthase subunit I|Methanocaldococcus jannaschii (strain ATCC

Query: 3 RLIHEDGI 10
R +HE+GI
Sbjct: 23 RSLHEEGI 30


>sp|SPEE_PYRAE|POLYAMINE aminopropyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 RLIHEDGI 10
RL+ EDGI
Sbjct: 188 RLLREDGI 195


>sp|PDXS_HALMA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Haloarcula marismortui (strain

Query: 1 PPRLIHE 7
P RL+HE
Sbjct: 200 PRRLVHE 206


>sp|TRMY_THEKO|TRNA (pseudouridine(54)-N(1))-methyltransferase|Thermococcus

Query: 1 PPRLIHEDG 9
PP+ IH +G
Sbjct: 62 PPKTIHFEG 70


>sp|DTDA_METMJ|D-AMINOACYL-TRNA deacylase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 RLIHEDGI 10
RLIH+D I
Sbjct: 47 RLIHQDRI 54


>sp|EF2_HALMA|ELONGATION factor 2|Haloarcula marismortui (strain ATCC 43049

Query: 3 RLIHEDG 9
RL++EDG
Sbjct: 285 RLVNEDG 291


>sp|PRIS_METTP|DNA primase small subunit PriS|Methanothrix thermoacetophila (strain

Query: 1 PPRLIHEDGI 10
P R IH+ G+
Sbjct: 182 PERFIHKIGV 191




721|Sequence|3601|3610|HEDGIIRPYD

>sp|MCRY_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 EDGIIRP 8
EDG+IRP
Sbjct: 278 EDGVIRP 284


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EDGIIRPY 9
+DG I+PY
Sbjct: 651 DDGTIKPY 658


>sp|KPRS_HALSA|RIBOSE-PHOSPHATE pyrophosphokinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 HEDGIIRPYD 10
HEDG++ +D
Sbjct: 123 HEDGVLECFD 132


>sp|KPRS_HALS3|RIBOSE-PHOSPHATE pyrophosphokinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 HEDGIIRPYD 10
HEDG++ +D
Sbjct: 123 HEDGVLECFD 132


>sp|JAMM2_HALVD|PROBABLE metalloprotease HVO_1016|Haloferax volcanii (strain ATCC 29605

Query: 1 HEDGIIRPYD 10
H +G++RP D
Sbjct: 89 HPNGVLRPSD 98


>sp|HMGCS_THEVO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HEDGIIRPY 9
++DG+I PY
Sbjct: 255 YKDGLITPY 263


>sp|NPD2_ARCFU|NAD-DEPENDENT protein deacylase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EDGIIRPYD 10
EDG+ R YD
Sbjct: 38 EDGLWRKYD 46


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 4 GIIRPY 9
GII+PY
Sbjct: 653 GIIKPY 658


>sp|RLME_METMJ|RIBOSOMAL RNA large subunit methyltransferase|Methanoculleus marisnigri

Query: 1 HEDGIIRPYD 10
+GIIRP D
Sbjct: 32 QRNGIIRPDD 41


>sp|RPO1C_THEGJ|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus gammatolerans (strain DSM

Query: 3 DGIIRP 8
DG+IRP
Sbjct: 315 DGVIRP 320


>sp|LYSY_NITMS|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 4 GIIRPY 9
G+IRPY
Sbjct: 196 GVIRPY 201


>sp|RPO1C_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus celer

Query: 3 DGIIRP 8
DG+IRP
Sbjct: 317 DGVIRP 322


>sp|RPO1C_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DGIIRP 8
DGI+RP
Sbjct: 317 DGIVRP 322


>sp|RPO1C_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus kodakarensis (strain ATCC

Query: 3 DGIIRP 8
DG+IRP
Sbjct: 315 DGVIRP 320


>sp|MOBA_METJA|PROBABLE molybdenum cofactor guanylyltransferase|Methanocaldococcus

Query: 1 HEDGIIRP 8
HE+G I P
Sbjct: 135 HENGYIEP 142


>sp|LYSY_CENSY|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 4 GIIRPY 9
G+IRPY
Sbjct: 196 GVIRPY 201


>sp|HMGCS_SULAC|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EDGIIRPY 9
+DG++ PY
Sbjct: 257 KDGLVSPY 264


>sp|ABLB_METMA|BETA-LYSINE N(6)-acetyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EDGIIRPY 9
E+GIIR Y
Sbjct: 45 EEGIIRRY 52


>sp|AATA_METST|A-TYPE ATP synthase subunit A|Methanosphaera stadtmanae (strain ATCC

Query: 3 DGIIRPYD 10
DGI RP D
Sbjct: 85 DGIQRPLD 92


>sp|AATA_HYPBU|A-TYPE ATP synthase subunit A|Hyperthermus butylicus (strain DSM 5456

Query: 3 DGIIRPYD 10
DGI RP D
Sbjct: 86 DGIQRPLD 93


>sp|NEP1_PYRIL|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum islandicum (strain

Query: 1 HEDGIIRPY 9
HE G+ +P+
Sbjct: 151 HESGVKKPF 159


>sp|R15PI_PYRAB|RIBOSE 1,5-bisphosphate isomerase|Pyrococcus abyssi (strain GE5 /

Query: 2 EDGIIRPY 9
E GII PY
Sbjct: 295 EKGIIPPY 302


>sp|GSA_HALWD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 DGIIRPYD 10
+GI+RP D
Sbjct: 207 NGIVRPVD 214


>sp|AROD_THEKO|3-DEHYDROQUINATE dehydratase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 EDGIIRPYD 10
E+G IRP D
Sbjct: 57 EEGGIRPLD 65


>sp|Y3531_METJA|PUTATIVE antitoxin MJECL31|Methanocaldococcus jannaschii (strain ATCC

Query: 1 HEDGIIRP 8
+EDG+++P
Sbjct: 9 YEDGVLKP 16


>sp|RPO1C_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus abyssi (strain GE5 /

Query: 3 DGIIRP 8
DG++RP
Sbjct: 317 DGVVRP 322


>sp|Y887_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 HEDGIIRP 8
H +GI+RP
Sbjct: 93 HLNGILRP 100


>sp|AATA_IGNH4|A-TYPE ATP synthase subunit A|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 DGIIRPYD 10
DGI+RP +
Sbjct: 86 DGILRPLE 93


>sp|LYSY_HALWD|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 4 GIIRPY 9
G++RPY
Sbjct: 197 GVVRPY 202


>sp|HMGCS_THEAC|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HEDGIIRPY 9
++DG++ PY
Sbjct: 255 YKDGLLTPY 263


>sp|RPO1C_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus horikoshii (strain ATCC

Query: 3 DGIIRP 8
DG++RP
Sbjct: 317 DGVVRP 322


>sp|AATA_THESI|A-TYPE ATP synthase subunit A|Thermococcus sp. (strain KI)

Query: 3 DGIIRPYD 10
DGI RP D
Sbjct: 83 DGIQRPLD 90


>sp|RPO2C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 2 EDGIIRP 8
EDGII P
Sbjct: 278 EDGIINP 284


>sp|RPO2C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 2 EDGIIRP 8
EDGII P
Sbjct: 278 EDGIINP 284


>sp|ECFA_METJA|ENERGY-COUPLING factor transporter ATP-binding protein|Methanocaldococcus

Query: 1 HEDGIIRP 8
H +GI+RP
Sbjct: 49 HFNGILRP 56


>sp|GUAAA_SULAC|GMP synthase [glutamine-hydrolyzing] subunit A|Sulfolobus

Query: 1 HEDGIIRP 8
H D ++RP
Sbjct: 128 HNDEVVRP 135


>sp|LYSY_NATPD|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 4 GIIRPY 9
G++RPY
Sbjct: 197 GVVRPY 202


>sp|LYSY_HALMA|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 4 GIIRPY 9
G++RPY
Sbjct: 196 GVVRPY 201


>sp|AATA_THEAC|A-TYPE ATP synthase subunit A|Thermoplasma acidophilum (strain ATCC

Query: 3 DGIIRPYD 10
DGI RP D
Sbjct: 83 DGIQRPLD 90


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 3 DGIIRPYD 10
DGI RP D
Sbjct: 83 DGIQRPLD 90


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 DGIIRPYD 10
DG++R YD
Sbjct: 424 DGLMRDYD 431


>sp|MOAA_METTM|PROBABLE GTP 3',8-cyclase|Methanothermobacter marburgensis (strain ATCC

Query: 1 HEDGIIR 7
H DGI+R
Sbjct: 30 HRDGILR 36


>sp|LYSY_CALMQ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 HEDGIIRPY 9
H ++RPY
Sbjct: 199 HRTHVVRPY 207




722|Sequence|3606|3615|IRPYDRQESE

>sp|FPOH_METMA|F(420)H(2) dehydrogenase subunit H|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PYDRQESE 10
P+D+ ESE
Sbjct: 226 PFDQNESE 233


>sp|FPOH_METBF|F(420)H(2) dehydrogenase subunit H|Methanosarcina barkeri (strain Fusaro /

Query: 3 PYDRQESE 10
P+D+ ESE
Sbjct: 222 PFDQNESE 229


>sp|FPOH_METAC|F(420)H(2) dehydrogenase subunit H|Methanosarcina acetivorans (strain ATCC

Query: 3 PYDRQESE 10
P+D+ ESE
Sbjct: 224 PFDQNESE 231


>sp|RL2_METKA|LARGE ribosomal subunit protein uL2|Methanopyrus kandleri (strain AV19

Query: 2 RPYDRQE 8
RPYD QE
Sbjct: 31 RPYDEQE 37


>sp|Y1495_METJA|UNCHARACTERIZED protein MJ1495|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PYDRQESE 10
PY ++ESE
Sbjct: 281 PYSKKESE 288


>sp|AATB_PICTO|A-TYPE ATP synthase subunit B|Picrophilus torridus (strain ATCC 700027

Query: 1 IRPYDRQE 8
I PY R+E
Sbjct: 117 INPYSREE 124




723|Sequence|3611|3620|RQESEGSDLL

>sp|AROD_METTP|3-DEHYDROQUINATE dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 RQESEGSDLL 10
R ESEG+D++
Sbjct: 32 RAESEGADII 41


>sp|RNZ_IGNH4|RIBONUCLEASE Z|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 QESEGSDLL 10
+E+EG+DLL
Sbjct: 216 EEAEGADLL 224


>sp|THIE_METVS|THIAMINE-PHOSPHATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 ESEGSDLL 10
ESEG+D L
Sbjct: 117 ESEGADYL 124


>sp|SURE_METBF|5'-NUCLEOTIDASE SurE|Methanosarcina barkeri (strain Fusaro /

Query: 1 RQESEGSDL 9
R+E EG+D+
Sbjct: 228 REEEEGTDV 236


>sp|Y1178_METJA|UNCHARACTERIZED glycosyltransferase MJ1178|Methanocaldococcus jannaschii (strain

Query: 3 ESEGSDLL 10
ESEG DL+
Sbjct: 80 ESEGIDLI 87


>sp|SURE_METMA|5'-NUCLEOTIDASE SurE|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RQESEGSDL 9
R+E EG+D+
Sbjct: 228 REEEEGTDV 236


>sp|SURE_METAC|5'-NUCLEOTIDASE SurE|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RQESEGSDL 9
R+E EG+D+
Sbjct: 228 REEEEGTDV 236


>sp|THIE_METMP|THIAMINE-PHOSPHATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 ESEGSDLL 10
ESEG+D L
Sbjct: 117 ESEGADYL 124


>sp|AROD_PYRAB|3-DEHYDROQUINATE dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 2 QESEGSDLL 10
ESEG+D++
Sbjct: 130 MESEGADIV 138


>sp|RS6E_HALSA|SMALL ribosomal subunit protein eS6|Halobacterium salinarum (strain

Query: 1 RQESEGSDLL 10
R++ +GSDL+
Sbjct: 64 REDVDGSDLM 73


>sp|RS6E_HALS3|SMALL ribosomal subunit protein eS6|Halobacterium salinarum (strain

Query: 1 RQESEGSDLL 10
R++ +GSDL+
Sbjct: 64 REDVDGSDLM 73


>sp|THIE_METM7|THIAMINE-PHOSPHATE synthase|Methanococcus maripaludis (strain C7 /

Query: 3 ESEGSDLL 10
ESEG+D L
Sbjct: 117 ESEGADYL 124


>sp|FTSZ_METTH|CELL division protein FtsZ|Methanothermobacter thermautotrophicus

Query: 1 RQESEGSDLL 10
R+E EG+D++
Sbjct: 117 RRELEGADMV 126




724|Sequence|3616|3625|GSDLLENHIK

>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GSDLLENHI 9
G DL++NHI
Sbjct: 576 GRDLIQNHI 584


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GSDLLENHI 9
G DL++NHI
Sbjct: 584 GRDLVQNHI 592


>sp|Y105_METJA|UNCHARACTERIZED protein MJ0105|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SDLLENHIK 10
+D +ENHIK
Sbjct: 53 NDFIENHIK 61


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GSDLLENHI 9
G DL++NH+
Sbjct: 585 GRDLIQNHL 593


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 GSDLLENHI 9
G DL++NH+
Sbjct: 580 GRDLVQNHL 588


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GSDLLENHI 9
G DL+ NH+
Sbjct: 657 GKDLIRNHL 665


>sp|DPH2_METJA|2-(3-AMINO-3-CARBOXYPROPYL)HISTIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GSDLLENHIK 10
DL++NH+K
Sbjct: 82 ACDLIDNHVK 91


>sp|SYL_PYRNV|LEUCINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GSDLLENHI 9
G DL+ NH+
Sbjct: 598 GKDLIPNHL 606


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GSDLLENHI 9
G DL+ NH+
Sbjct: 598 GKDLIPNHL 606


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GSDLLENHI 9
G DL+ NH+
Sbjct: 610 GKDLIPNHL 618


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GSDLLENHI 9
G DL+ NH+
Sbjct: 598 GKDLIPNHL 606


>sp|SYL_PYRAR|LEUCINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GSDLLENHI 9
G DL+ NH+
Sbjct: 598 GKDLIPNHL 606


>sp|SYL_PYRAE|LEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GSDLLENHI 9
G DL+ NH+
Sbjct: 598 GKDLIPNHL 606


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 GSDLLENHI 9
G DL+ NH+
Sbjct: 610 GKDLIPNHL 618


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GSDLLENHI 9
G DL+ NH+
Sbjct: 597 GKDLIPNHL 605


>sp|FEN_PICTO|FLAP endonuclease 1|Picrophilus torridus (strain ATCC 700027

Query: 2 SDLLENHIK 10
S+LLEN+IK
Sbjct: 66 SNLLENNIK 74


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GSDLLENHI 9
G DL+ NH+
Sbjct: 581 GKDLIPNHL 589


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GSDLLENHI 9
G DL+ NH+
Sbjct: 589 GKDLVANHL 597


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 GSDLLENHI 9
G DL+ NH+
Sbjct: 591 GPDLIPNHL 599


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GSDLLENHI 9
G DL+ NH+
Sbjct: 592 GKDLVPNHL 600


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GSDLLENHI 9
G DL+ NH+
Sbjct: 592 GKDLVPNHL 600


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GSDLLENHI 9
G DL+ NH+
Sbjct: 592 GKDLVPNHL 600


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GSDLLENHI 9
G DL+ NH+
Sbjct: 590 GKDLVANHL 598


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GSDLLENHI 9
G DL+ NH+
Sbjct: 591 GKDLIPNHL 599


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GSDLLENHI 9
G DL+ NH+
Sbjct: 583 GKDLIPNHL 591


>sp|GFPS_NATPD|GERANYLFARNESYL diphosphate synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GSDLLEN 7
GSDL+EN
Sbjct: 251 GSDLVEN 257


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GSDLLENHI 9
G DL+ NH+
Sbjct: 579 GKDLVPNHL 587


>sp|MOBB_METJA|PUTATIVE molybdopterin-guanine dinucleotide biosynthesis

Query: 1 GSDLLENH 8
GSDL+++H
Sbjct: 116 GSDLIDDH 123


>sp|Y049_METTM|UNCHARACTERIZED protein MTBMA_c00490|Methanothermobacter marburgensis (strain

Query: 2 SDLLENHI 9
SDL NHI
Sbjct: 80 SDLRRNHI 87


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 5 LENHIK 10
LENHIK
Sbjct: 274 LENHIK 279


>sp|TRPG_METTM|ANTHRANILATE synthase component 2|Methanothermobacter marburgensis (strain ATCC

Query: 1 GSDLLENHIK 10
G D+LEN ++
Sbjct: 186 GRDILENFLR 195


>sp|PYRB_METTP|ASPARTATE carbamoyltransferase catalytic subunit|Methanothrix

Query: 1 GSDLLENHI 9
GSD+LE I
Sbjct: 36 GSDILEGKI 44




725|Sequence|3621|3630|ENHIKKLEGE

>sp|CBIA_METJA|COBYRINATE a,c-diamide synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ENHIKKLE 8
ENHIKKL+
Sbjct: 155 ENHIKKLK 162


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 2 NHIKKLEG 9
+HIKK+EG
Sbjct: 653 SHIKKIEG 660


>sp|AATI_SACS2|A-TYPE ATP synthase subunit I|Saccharolobus solfataricus (strain ATCC

Query: 1 ENHIKKLEGE 10
E H+KK++ E
Sbjct: 284 EKHVKKVQNE 293


>sp|NNR_HYPBU|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Hyperthermus butylicus (strain

Query: 2 NHIKKLE 8
+H+KKLE
Sbjct: 309 DHVKKLE 315


>sp|HIS7_PYRFU|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 HIKKLEGE 10
HIK+L GE
Sbjct: 135 HIKQLSGE 142


>sp|COFE_HALLT|COENZYME F420:L-glutamate ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 ENHIKKLEGE 10
+NH +++EG+
Sbjct: 229 DNHFREVEGD 238


>sp|PURA2_METAC|ADENYLOSUCCINATE synthetase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ENHIKKLE 8
+N+IK+LE
Sbjct: 394 QNYIKRLE 401


>sp|RAD50_THEVO|DNA double-strand break repair Rad50|Thermoplasma volcanium (strain

Query: 1 ENHIKKLEGE 10
EN IKKL+ E
Sbjct: 489 ENEIKKLDEE 498


>sp|TPIS_SULTO|TRIOSEPHOSPHATE isomerase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 NHIKKLEG 9
N IKK+EG
Sbjct: 165 NEIKKVEG 172




726|Sequence|3626|3635|KLEGETYRYH

>sp|COFE_METAC|COENZYME F420:L-glutamate ligase|Methanosarcina acetivorans (strain ATCC

Query: 1 KLEGETYR 8
K EGET+R
Sbjct: 45 KAEGETFR 52


>sp|TIAS_METLZ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocorpusculum labreanum

Query: 2 LEGETYRY 9
+EGE+YR+
Sbjct: 264 IEGESYRF 271


>sp|FLPA_THEGJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus gammatolerans

Query: 1 KLEGETYR 8
K EGE YR
Sbjct: 41 KFEGEEYR 48


>sp|THII_METTH|PROBABLE tRNA sulfurtransferase|Methanothermobacter thermautotrophicus

Query: 3 EGETYRYH 10
E ETY YH
Sbjct: 156 EDETYIYH 163


>sp|FLPA_THEKO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus kodakarensis

Query: 1 KLEGETYR 8
K EGE YR
Sbjct: 41 KFEGEEYR 48


>sp|FLPA_THEON|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus onnurineus (strain

Query: 1 KLEGETYR 8
K EGE YR
Sbjct: 41 KFEGEEYR 48


>sp|RTCA_METTP|RNA 3'-terminal phosphate cyclase|Methanothrix thermoacetophila (strain

Query: 3 EGETYRYH 10
EGE +R H
Sbjct: 320 EGEVFRIH 327


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 LEGETYRY 9
LEG YRY
Sbjct: 958 LEGNVYRY 965


>sp|EI2BL_PYRAB|PUTATIVE translation initiation factor eIF-2B|Pyrococcus abyssi (strain GE5

Query: 4 GETYRYH 10
ETY++H
Sbjct: 218 AETYKFH 224


>sp|RAD50_METKA|DNA double-strand break repair Rad50|Methanopyrus kandleri (strain AV19

Query: 3 EGETYRYH 10
EGE RYH
Sbjct: 602 EGELERYH 609


>sp|R15PI_THEKO|RIBOSE 1,5-bisphosphate isomerase|Thermococcus kodakarensis (strain ATCC

Query: 2 LEGETYRYH 10
+ ETY++H
Sbjct: 232 IAAETYKFH 240


>sp|Y579_METJA|UNCHARACTERIZED protein MJ0579|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EGETYRYH 10
EG+TY Y+
Sbjct: 71 EGKTYNYN 78


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 KLEGETYRY 9
+LEG TYR+
Sbjct: 277 ELEGLTYRH 285


Query: 1 KLEGETY 7
+L+GETY
Sbjct: 246 RLDGETY 252


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KLEGETYRY 9
+LEG TYR+
Sbjct: 277 ELEGLTYRH 285


>sp|R15PI_PYRAB|RIBOSE 1,5-bisphosphate isomerase|Pyrococcus abyssi (strain GE5 /

Query: 2 LEGETYRYH 10
+ ETY++H
Sbjct: 234 IAAETYKFH 242


>sp|R15PI_PYRHO|RIBOSE 1,5-bisphosphate isomerase|Pyrococcus horikoshii (strain ATCC

Query: 2 LEGETYRYH 10
+ ETY++H
Sbjct: 234 IAAETYKFH 242


>sp|EI2BL_PYRHO|PUTATIVE translation initiation factor eIF-2B|Pyrococcus horikoshii (strain

Query: 4 GETYRYH 10
ETY++H
Sbjct: 218 AETYKFH 224


>sp|R15PI_PYRFU|RIBOSE 1,5-bisphosphate isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LEGETYRYH 10
+ ETY++H
Sbjct: 234 IAAETYKFH 242


>sp|CAS6_HALVD|CRISPR-ASSOCIATED endoribonuclease Cas6|Haloferax volcanii (strain ATCC 29605

Query: 1 KLEGETYRYH 10
++ ET+RYH
Sbjct: 231 RVRDETHRYH 240


>sp|R15PI_METJA|RIBOSE 1,5-bisphosphate isomerase|Methanocaldococcus jannaschii (strain

Query: 4 GETYRYH 10
ETY++H
Sbjct: 230 AETYKFH 236


>sp|FLPA_PYRAB|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 KLEGETYR 8
K EGE YR
Sbjct: 42 KWEGEEYR 49


>sp|EI2BL_PYRFU|PUTATIVE translation initiation factor eIF-2B|Pyrococcus furiosus (strain

Query: 4 GETYRYH 10
ETY++H
Sbjct: 218 AETYKFH 224


>sp|FLPA_PYRHO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus horikoshii (strain

Query: 1 KLEGETYR 8
K EGE YR
Sbjct: 42 KWEGEEYR 49




727|Sequence|3631|3640|TYRYHCAIPG

>sp|RF1_METBU|PEPTIDE chain release factor subunit|Methanococcoides burtonii (strain DSM

Query: 1 TYRYHC 6
TYRYHC
Sbjct: 116 TYRYHC 121


>sp|THII_METTH|PROBABLE tRNA sulfurtransferase|Methanothermobacter thermautotrophicus

Query: 1 TYRYHCAIPG 10
TY YH IPG
Sbjct: 159 TYIYHRVIPG 168


>sp|TFE_PYRFU|TRANSCRIPTION factor E|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TYRYHCAIPG 10
TY YHC PG
Sbjct: 114 TY-YHCGTPG 122


>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 2 YRYHCAIPG 10
Y+Y+C+ PG
Sbjct: 50 YKYYCSDPG 58


>sp|HDRA_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 2 YRYHCAIPG 10
Y+Y+C+ PG
Sbjct: 51 YKYYCSDPG 59


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YRYHCAIP 9
YR+ C IP
Sbjct: 504 YRFSCKIP 511


>sp|CSD_METTH|PROBABLE cysteine desulfurase|Methanothermobacter thermautotrophicus (strain

Query: 4 YHCAIPG 10
+HCAIP
Sbjct: 354 HHCAIPA 360


>sp|TRUA_METMJ|TRNA pseudouridine synthase A|Methanoculleus marisnigri (strain ATCC

Query: 1 TYRYHCAIPG 10
TYRY+ + PG
Sbjct: 109 TYRYYFSAPG 118


>sp|RF1_METST|PEPTIDE chain release factor subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 TYRYHC 6
TY YHC
Sbjct: 118 TYTYHC 123


>sp|RF1_HALWD|PEPTIDE chain release factor subunit|Haloquadratum walsbyi (strain DSM

Query: 1 TYRYHC 6
++RYHC
Sbjct: 124 SFRYHC 129


>sp|RF1_HALVD|PEPTIDE chain release factor subunit|Haloferax volcanii (strain ATCC 29605

Query: 1 TYRYHC 6
++RYHC
Sbjct: 124 SFRYHC 129


>sp|RF1_HALSA|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 1 TYRYHC 6
++RYHC
Sbjct: 124 SFRYHC 129


>sp|RF1_HALS3|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 1 TYRYHC 6
++RYHC
Sbjct: 124 SFRYHC 129


>sp|RF1_HALMA|PEPTIDE chain release factor subunit|Haloarcula marismortui (strain ATCC

Query: 1 TYRYHC 6
++RYHC
Sbjct: 124 SFRYHC 129


>sp|RF1_HALLT|PEPTIDE chain release factor subunit|Halorubrum lacusprofundi (strain ATCC

Query: 1 TYRYHC 6
++RYHC
Sbjct: 124 SFRYHC 129


>sp|RF1_METMA|PEPTIDE chain release factor subunit|Methanosarcina mazei (strain ATCC

Query: 2 YRYHC 6
Y+YHC
Sbjct: 118 YKYHC 122


>sp|RF1_ARCFU|PEPTIDE chain release factor subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 YRYHC 6
Y+YHC
Sbjct: 114 YKYHC 118


>sp|RF11_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 2 YRYHC 6
Y+YHC
Sbjct: 118 YKYHC 122


>sp|RF1_METTH|PEPTIDE chain release factor subunit|Methanothermobacter thermautotrophicus

Query: 1 TYRYHC 6
TY YHC
Sbjct: 118 TYIYHC 123


>sp|PURT_SACS2|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Saccharolobus

Query: 1 TYRYH 5
TYRYH
Sbjct: 207 TYRYH 211


>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 4 YHCAIP 9
+HCA+P
Sbjct: 354 HHCALP 359


>sp|MOAA_METTM|PROBABLE GTP 3',8-cyclase|Methanothermobacter marburgensis (strain ATCC

Query: 3 RYHCAI 8
RYHC I
Sbjct: 199 RYHCDI 204


>sp|MOAA_METTH|PROBABLE GTP 3',8-cyclase|Methanothermobacter thermautotrophicus (strain

Query: 3 RYHCAI 8
RYHC I
Sbjct: 199 RYHCDI 204


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 2 YRYHCAIPG 10
++ CA+PG
Sbjct: 779 FKQECAVPG 787


>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YRYHCAIPG 10
Y Y CA+ G
Sbjct: 318 YEYPCAVIG 326


>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain ATCC

Query: 4 YHCAIPG 10
Y C +PG
Sbjct: 514 YQCIVPG 520


>sp|RL30_ARCFU|LARGE ribosomal subunit protein uL30|Archaeoglobus fulgidus (strain

Query: 3 RYHCAI 8
RYHC +
Sbjct: 29 RYHCVV 34


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain ATCC

Query: 4 YHCAIPG 10
Y C +PG
Sbjct: 514 YQCIVPG 520




728|Sequence|3636|3645|CAIPGSKKTI

>sp|TRM4_METJA|TRNA (cytosine(48)-C(5))-methyltransferase|Methanocaldococcus

Query: 1 CAIPGSKKT 9
CA PG K T
Sbjct: 91 CAAPGGKTT 99


>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 2 AIPGSKKTI 10
A PG++KTI
Sbjct: 530 ASPGARKTI 538


>sp|IF1A2_METBF|TRANSLATION initiation factor 1A 2|Methanosarcina barkeri (strain Fusaro /

Query: 3 IPGSKK 8
IPGSKK
Sbjct: 66 IPGSKK 71


>sp|G3PP_PYRFU|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 IPGSKKTI 10
+PG++KT+
Sbjct: 98 VPGARKTL 105


>sp|Y1506_METJA|UNCHARACTERIZED protein MJ1506|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IPGSKKTI 10
IPG KTI
Sbjct: 198 IPGKTKTI 205


>sp|G6PI_PYRAB|GLUCOSE-6-PHOSPHATE isomerase|Pyrococcus abyssi (strain GE5 /

Query: 3 IPGSKKTI 10
IPG+KK +
Sbjct: 17 IPGAKKIV 24


>sp|RNH2_SULAC|RIBONUCLEASE HII|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 PGSKKTI 10
PG KKT+
Sbjct: 166 PGDKKTV 172


>sp|GPI_THEON|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus onnurineus (strain NA1)

Query: 3 IPGSKKTI 10
IPG+KK +
Sbjct: 18 IPGAKKLV 25


>sp|GPI_THEKO|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 IPGSKKTI 10
IPG+KK +
Sbjct: 18 IPGAKKLV 25


>sp|HPCAS_SULTO|3-HYDROXYPROPIONYL-COENZYME A synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 AIPGSKKTI 10
A+PG+K T+
Sbjct: 445 ALPGNKVTV 453


>sp|IF1A_METBU|TRANSLATION initiation factor 1A|Methanococcoides burtonii (strain DSM 6242

Query: 3 IPGSKK 8
IPGSKK
Sbjct: 57 IPGSKK 62


>sp|FTR_METFV|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanothermus fervidus (strain ATCC 43054

Query: 1 CAIPGSKK 8
C +PG KK
Sbjct: 269 CKVPGVKK 276




729|Sequence|3641|3650|SKKTILMVTN

***** No hits found ******


730|Sequence|3646|3655|LMVTNRRVLC

>sp|SYFB_METB6|PHENYLALANINE--TRNA ligase beta subunit|Methanoregula boonei (strain DSM 21154

Query: 3 VTNRRVLC 10
+TN RVLC
Sbjct: 380 LTNERVLC 387


>sp|MFNA_METHJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanospirillum hungatei JF-1

Query: 1 LMVTNRRVLC 10
LMV + RV C
Sbjct: 235 LMVRDERVFC 244


>sp|IF6_HALWD|TRANSLATION initiation factor 6|Haloquadratum walsbyi (strain DSM 16790

Query: 2 MVTNRRVLC 10
+ TNR VLC
Sbjct: 148 VATNRGVLC 156


>sp|PIMT_AERPE|PROTEIN-L-ISOASPARTATE O-methyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 MVTNRRVL 9
+VT+RRVL
Sbjct: 50 LVTSRRVL 57


>sp|NPD_HALMA|NAD-DEPENDENT protein deacetylase|Haloarcula marismortui (strain ATCC 43049

Query: 4 TNRRVLC 10
T+RRV+C
Sbjct: 134 THRRVVC 140


>sp|RECJ1_METJA|EXONUCLEASE RecJ1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LMVTNRRVLC 10
L+ NR++LC
Sbjct: 174 LIGLNRKILC 183


>sp|RL18_ARCFU|LARGE ribosomal subunit protein uL18|Archaeoglobus fulgidus (strain

Query: 3 VTNRRVL 9
+TNRRV+
Sbjct: 41 ITNRRVI 47


>sp|RL18_METHJ|LARGE ribosomal subunit protein uL18|Methanospirillum hungatei JF-1

Query: 4 TNRRVLC 10
TNR ++C
Sbjct: 40 TNRHIIC 46




731|Sequence|3651|3660|RRVLCIKEVE

>sp|Y1495_METJA|UNCHARACTERIZED protein MJ1495|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RRVLCIKEVE 10
+R+ CI+E+E
Sbjct: 43 KRLRCIREIE 52


>sp|DADD_METBU|5'-DEOXYADENOSINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 1 RRVLCIKE 8
R+VLC+ E
Sbjct: 405 RKVLCMNE 412


>sp|Y900_METJA|UNCHARACTERIZED protein MJ0900|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RRVLCIKEVE 10
RRV+ I+E+E
Sbjct: 447 RRVVSIEEIE 456


>sp|KAE1B_METMP|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 5 CIKEVE 10
CIKEVE
Sbjct: 537 CIKEVE 542




732|Sequence|3656|3665|IKEVEILGLM

>sp|SPSS2_METB6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanoregula boonei (strain DSM 21154

Query: 1 IKEVEILG 8
IKEVE+LG
Sbjct: 315 IKEVELLG 322


>sp|SPSS_METBF|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IKEVEILG 8
+KEVE+LG
Sbjct: 252 VKEVELLG 259


>sp|SPSS2_METHJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 IKEVEILG 8
+KEVE+LG
Sbjct: 315 VKEVEMLG 322


>sp|SPSS_METAC|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IKEVEILG 8
+KEVE+LG
Sbjct: 252 VKEVELLG 259


>sp|SPSS_METMA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IKEVEILG 8
+KE+E+LG
Sbjct: 252 VKEIELLG 259


>sp|CBIA_SULTO|COBYRINATE a,c-diamide synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IKEVEILGLM 10
IKEV++LG +
Sbjct: 162 IKEVQVLGYI 171


>sp|ARGD_METJA|ACETYLORNITHINE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IKEVEILGLM 10
IKEV LGLM
Sbjct: 329 IKEVRGLGLM 338


>sp|CDC61_METTH|ORC1-TYPE DNA replication protein 1|Methanothermobacter thermautotrophicus

Query: 1 IKEVEILGLM 10
I E+E+LGL+
Sbjct: 340 INELEMLGLI 349


>sp|SPSS1_ARCFU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KEVEILG 8
KEVE+LG
Sbjct: 240 KEVELLG 246


>sp|SPSS1_METLZ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 IKEVEILG 8
IKEV ILG
Sbjct: 254 IKEVGILG 261


>sp|AGLUS_METJA|ARCHAEAL glutamate synthase [NADPH]|Methanocaldococcus jannaschii (strain

Query: 2 KEVEILGL 9
KE+E+LG+
Sbjct: 498 KELEVLGI 505


>sp|SPSS_METTP|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 KEVEILG 8
KEVE+LG
Sbjct: 252 KEVELLG 258


>sp|HPS_METBF|3-HEXULOSE-6-PHOSPHATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IKEVEILGL 9
I EVE LGL
Sbjct: 314 IDEVETLGL 322


>sp|SPSS2_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanococcoides burtonii (strain DSM 6242

Query: 2 KEVEILG 8
KE+E+LG
Sbjct: 256 KEIELLG 262


>sp|TRPB_DESA1|TRYPTOPHAN synthase beta chain|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 IKEVEILGL 9
IK++E+LG+
Sbjct: 246 IKQLELLGV 254


>sp|SPSS_META3|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 IKEVEILG 8
+KE+E+LG
Sbjct: 251 VKEIEMLG 258


>sp|CDC6_METST|ORC1-TYPE DNA replication protein|Methanosphaera stadtmanae (strain ATCC

Query: 1 IKEVEILGLM 10
I E+E+LGL+
Sbjct: 341 INELEMLGLI 350


>sp|SPSS_METKA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 KEVEILG 8
KEVE+LG
Sbjct: 256 KEVEMLG 262




733|Sequence|3661|3670|ILGLMCVDWQ

>sp|SYS_KORCO|SERINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 6 CVDWQ 10
CVDWQ
Sbjct: 377 CVDWQ 381


>sp|SYV_HALSA|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 5 MCVDW 9
MC+DW
Sbjct: 112 MCIDW 116


>sp|SYV_HALS3|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 5 MCVDW 9
MC+DW
Sbjct: 112 MCIDW 116


>sp|MTNA_METAC|PUTATIVE methylthioribose-1-phosphate isomerase|Methanosarcina acetivorans

Query: 4 LMCVDW 9
L CVDW
Sbjct: 169 LACVDW 174


>sp|DNLI_METBU|DNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LGLMCVDWQ 10
LG++ V+W+
Sbjct: 254 LGMLAVEWK 262


>sp|Y3513_METJA|MCM-LIKE protein MJECL13|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LGLMCVD 8
LG++C+D
Sbjct: 373 LGVLCID 379


>sp|FPOF_METMA|F(420)H(2) dehydrogenase subunit F|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ILGLMCVD 8
I+GL+C++
Sbjct: 190 IIGLLCME 197


>sp|BACS1_HALSA|SENSORY rhodopsin-1|Halobacterium salinarum (strain ATCC 700922

Query: 1 ILGLMCVDW 9
I+GL +DW
Sbjct: 69 IVGLRYIDW 77


>sp|BACS1_HALS3|SENSORY rhodopsin-1|Halobacterium salinarum (strain ATCC 29341

Query: 1 ILGLMCVDW 9
I+GL +DW
Sbjct: 69 IVGLRYIDW 77


>sp|BACS_HALSD|SENSORY rhodopsin|Halorubrum sodomense

Query: 1 ILGLMCVDW 9
++GL VDW
Sbjct: 70 LVGLRYVDW 78


>sp|BACS1_HALSS|SENSORY rhodopsin-1|Halobacterium sp. (strain SG1)

Query: 1 ILGLMCVDW 9
++GL VDW
Sbjct: 70 LVGLRYVDW 78




734|Sequence|3666|3675|CVDWQCPFED

>sp|RS17_METAR|SMALL ribosomal subunit protein uS17|Methanocella arvoryzae (strain DSM

Query: 1 CVDWQCPF 8
C D QCPF
Sbjct: 16 CNDPQCPF 23


>sp|GCH3_METVS|GTP cyclohydrolase III|Methanococcus vannielii (strain ATCC 35089

Query: 3 DWQCPFED 10
D+QC FED
Sbjct: 196 DFQCMFED 203


>sp|SPEE_SULTO|POLYAMINE aminopropyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VDWQCPFE 9
++WQ P+E
Sbjct: 8 IEWQTPYE 15


>sp|SYS_KORCO|SERINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 CVDWQ 5
CVDWQ
Sbjct: 377 CVDWQ 381


>sp|RS17_HALWD|SMALL ribosomal subunit protein uS17|Haloquadratum walsbyi (strain DSM

Query: 1 CVDWQCPF 8
C D CPF
Sbjct: 14 CADTNCPF 21


>sp|RADA_METJA|DNA repair and recombination protein|Methanocaldococcus jannaschii

Query: 1 CVDWQCP 7
CV+ QCP
Sbjct: 150 CVNLQCP 156


>sp|RHAD_THEAC|L-RHAMNOSE 1-dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC

Query: 6 CPFED 10
CPFED
Sbjct: 95 CPFED 99


>sp|RS17_THEVO|SMALL ribosomal subunit protein uS17|Thermoplasma volcanium (strain

Query: 1 CVDWQCPF 8
C D CPF
Sbjct: 17 CTDPHCPF 24


>sp|SPEE_SACS2|POLYAMINE aminopropyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 2 VDWQCPFE 9
++WQ P+E
Sbjct: 8 LEWQTPYE 15


>sp|SPEE_SACI7|POLYAMINE aminopropyltransferase|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 VDWQCPFE 9
++WQ P+E
Sbjct: 8 LEWQTPYE 15


>sp|SPEE_SACI6|POLYAMINE aminopropyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 VDWQCPFE 9
++WQ P+E
Sbjct: 8 LEWQTPYE 15


>sp|SPEE_SACI4|POLYAMINE aminopropyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 VDWQCPFE 9
++WQ P+E
Sbjct: 8 LEWQTPYE 15


>sp|SPEE_SACI3|POLYAMINE aminopropyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 2 VDWQCPFE 9
++WQ P+E
Sbjct: 8 LEWQTPYE 15


>sp|SPEE_SACI2|POLYAMINE aminopropyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 2 VDWQCPFE 9
++WQ P+E
Sbjct: 8 LEWQTPYE 15


>sp|SPEE_SACI1|POLYAMINE aminopropyltransferase|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 VDWQCPFE 9
++WQ P+E
Sbjct: 8 LEWQTPYE 15


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 4 WQCPFED 10
W CP ED
Sbjct: 523 WPCPSED 529


>sp|RS172_METAC|SMALL ribosomal subunit protein uS17B|Methanosarcina acetivorans

Query: 1 CVDWQCPF 8
C D +CPF
Sbjct: 16 CNDPECPF 23


>sp|RS17_METHJ|SMALL ribosomal subunit protein uS17|Methanospirillum hungatei JF-1

Query: 1 CVDWQCPF 8
C D CPF
Sbjct: 16 CSDVNCPF 23


>sp|TTH_ACIAM|TETRATHIONATE hydrolase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 VDWQCPF 8
VDWQ P
Sbjct: 102 VDWQLPL 108


>sp|RS17_METPE|SMALL ribosomal subunit protein uS17|Methanosphaerula palustris (strain

Query: 1 CVDWQCPF 8
C D CPF
Sbjct: 16 CQDVNCPF 23


>sp|THIC2_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 QCPFED 10
QCP ED
Sbjct: 399 QCPIED 404


>sp|RS17_PICTO|SMALL ribosomal subunit protein uS17|Picrophilus torridus (strain ATCC

Query: 1 CVDWQCPF 8
C D +CPF
Sbjct: 15 CNDPKCPF 22


>sp|RS17_METVA|SMALL ribosomal subunit protein uS17|Methanococcus vannielii

Query: 1 CVDWQCPF 8
C D CPF
Sbjct: 15 CEDVNCPF 22


>sp|RS17_ARCFU|SMALL ribosomal subunit protein uS17|Archaeoglobus fulgidus (strain

Query: 1 CVDWQCPF 8
C D CPF
Sbjct: 15 CEDENCPF 22


>sp|RS17_METMJ|SMALL ribosomal subunit protein uS17|Methanoculleus marisnigri (strain

Query: 1 CVDWQCPF 8
C D CPF
Sbjct: 16 CEDVNCPF 23


>sp|SYS_SULTO|SERINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 CVDWQ 5
C+DWQ
Sbjct: 377 CLDWQ 381


>sp|SYS_SULAC|SERINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 CVDWQ 5
C+DWQ
Sbjct: 377 CLDWQ 381


>sp|RS17_NITMS|SMALL ribosomal subunit protein uS17|Nitrosopumilus maritimus (strain

Query: 1 CVDWQCPF 8
C D CPF
Sbjct: 16 CEDKNCPF 23


>sp|RS17_SULTO|SMALL ribosomal subunit protein uS17|Sulfurisphaera tokodaii (strain

Query: 1 CVDWQCPF 8
C D CPF
Sbjct: 23 CDDINCPF 30


>sp|RS17_HALMA|SMALL ribosomal subunit protein uS17|Haloarcula marismortui (strain

Query: 1 CVDWQCPF 8
C D CPF
Sbjct: 14 CADQNCPF 21


>sp|RS17_METB6|SMALL ribosomal subunit protein uS17|Methanoregula boonei (strain DSM

Query: 1 CVDWQCPF 8
C D CPF
Sbjct: 16 CKDVNCPF 23


>sp|RS17_HALSA|SMALL ribosomal subunit protein uS17|Halobacterium salinarum (strain

Query: 1 CVDWQCPF 8
C D CPF
Sbjct: 14 CSDEDCPF 21


>sp|RS17_HALS3|SMALL ribosomal subunit protein uS17|Halobacterium salinarum (strain

Query: 1 CVDWQCPF 8
C D CPF
Sbjct: 14 CSDEDCPF 21


>sp|RL37A_PYRIL|LARGE ribosomal subunit protein eL43|Pyrobaculum islandicum (strain DSM

Query: 4 WQCP 7
WQCP
Sbjct: 57 WQCP 60


>sp|SYS_SACS2|SERINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 CVDWQ 5
C DWQ
Sbjct: 377 CTDWQ 381


>sp|SYS_SACI7|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 CVDWQ 5
C DWQ
Sbjct: 377 CTDWQ 381


>sp|SYS_SACI6|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 CVDWQ 5
C DWQ
Sbjct: 377 CTDWQ 381


>sp|SYS_SACI4|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 CVDWQ 5
C DWQ
Sbjct: 377 CTDWQ 381


>sp|SYS_SACI3|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 CVDWQ 5
C DWQ
Sbjct: 377 CTDWQ 381


>sp|SYS_SACI2|SERINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 CVDWQ 5
C DWQ
Sbjct: 377 CTDWQ 381


>sp|SYS_SACI1|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 CVDWQ 5
C DWQ
Sbjct: 377 CTDWQ 381


>sp|SYS_METS5|SERINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 CVDWQ 5
C DWQ
Sbjct: 377 CTDWQ 381


>sp|SYS_AERPE|SERINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 CVDWQ 5
C DWQ
Sbjct: 380 CTDWQ 384


>sp|RS17_METLZ|SMALL ribosomal subunit protein uS17|Methanocorpusculum labreanum

Query: 1 CVDWQCPF 8
C D CPF
Sbjct: 16 CDDVNCPF 23


>sp|Y749_METJA|UNCHARACTERIZED protein MJ0749|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 WQCPF 8
W CPF
Sbjct: 85 WMCPF 89


>sp|RS17_METJA|SMALL ribosomal subunit protein uS17|Methanocaldococcus jannaschii

Query: 1 CVDWQCPF 8
C D CPF
Sbjct: 17 CDDKNCPF 24


>sp|RS17_METMP|SMALL ribosomal subunit protein uS17|Methanococcus maripaludis (strain

Query: 1 CVDWQCPF 8
C D CPF
Sbjct: 15 CEDPNCPF 22


>sp|CHED1_METMA|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina mazei

Query: 6 CPFED 10
CPF+D
Sbjct: 35 CPFQD 39


>sp|Y597_METJA|UNCHARACTERIZED protein MJ0597|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DWQCP 7
DW CP
Sbjct: 150 DWICP 154


>sp|RS17_METBF|SMALL ribosomal subunit protein uS17|Methanosarcina barkeri (strain

Query: 1 CVDWQCPF 8
C D CPF
Sbjct: 16 CNDSYCPF 23


>sp|SYS_THEGJ|SERINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 CVDWQ 5
C DWQ
Sbjct: 377 CTDWQ 381


>sp|SYS_PYRAB|SERINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 CVDWQ 5
C DWQ
Sbjct: 377 CTDWQ 381


>sp|SYS_PYRFU|SERINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CVDWQ 5
C DWQ
Sbjct: 377 CTDWQ 381


>sp|SYS_PYRHO|SERINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 CVDWQ 5
C DWQ
Sbjct: 377 CTDWQ 381


>sp|SYS_IGNH4|SERINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 CVDWQ 5
C DWQ
Sbjct: 380 CTDWQ 384


>sp|SYS_THEKO|SERINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 CVDWQ 5
C DWQ
Sbjct: 377 CTDWQ 381


>sp|QUEE_METHJ|7-CARBOXY-7-DEAZAGUANINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 CVDWQCP 7
C+D +CP
Sbjct: 145 CMDVKCP 151


>sp|SYS_ARCFU|SERINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CVDWQ 5
C DWQ
Sbjct: 374 CTDWQ 378


>sp|RS17_METBU|SMALL ribosomal subunit protein uS17|Methanococcoides burtonii (strain

Query: 1 CVDWQCPF 8
C D CPF
Sbjct: 16 CDDINCPF 23


>sp|RS17_METAC|SMALL ribosomal subunit protein uS17A|Methanosarcina acetivorans

Query: 1 CVDWQCPF 8
C D CPF
Sbjct: 16 CDDAYCPF 23


>sp|RS17_METMA|SMALL ribosomal subunit protein uS17|Methanosarcina mazei (strain ATCC

Query: 1 CVDWQCPF 8
C D CPF
Sbjct: 16 CDDAYCPF 23


>sp|RS17_METTH|SMALL ribosomal subunit protein uS17|Methanothermobacter

Query: 1 CVDWQCPF 8
C D CPF
Sbjct: 13 CSDPNCPF 20


>sp|RS5_METTH|SMALL ribosomal subunit protein uS5|Methanothermobacter

Query: 1 CVDWQC 6
C DW C
Sbjct: 118 CGDWGC 123


>sp|RS5_METS3|SMALL ribosomal subunit protein uS5|Methanobrevibacter smithii (strain

Query: 1 CVDWQC 6
C DW C
Sbjct: 116 CGDWGC 121


>sp|RS17_METST|SMALL ribosomal subunit protein uS17|Methanosphaera stadtmanae (strain

Query: 1 CVDWQCPF 8
C D CPF
Sbjct: 13 CHDPNCPF 20


>sp|TDXH_HYPBU|PEROXIREDOXIN butylicus (strain DSM 5456

Query: 1 CVDWQCPFED 10
C DW +ED
Sbjct: 203 CFDWWFCYED 212


>sp|Y2328_HALVD|UNCHARACTERIZED isochorismatase family protein HVO_2328|Haloferax volcanii

Query: 1 CVDWQCPFED 10
C+D Q F+D
Sbjct: 14 CIDMQVGFDD 23


>sp|RS17_METKA|SMALL ribosomal subunit protein uS17|Methanopyrus kandleri (strain AV19

Query: 1 CVDWQCPF 8
C D CPF
Sbjct: 22 CDDPNCPF 29




735|Sequence|3671|3680|CPFEDFVFPP

>sp|RHAD_THEAC|L-RHAMNOSE 1-dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC

Query: 1 CPFEDF 6
CPFEDF
Sbjct: 95 CPFEDF 100


>sp|Y994_METTH|PUTATIVE aminohydrolase MTH_994|Methanothermobacter thermautotrophicus

Query: 2 PFEDFVFPP 10
P ED V PP
Sbjct: 76 PLEDIVRPP 84


>sp|RL1_METAR|LARGE ribosomal subunit protein uL1|Methanocella arvoryzae (strain DSM

Query: 5 DFVFPP 10
D+VFPP
Sbjct: 78 DYVFPP 83


>sp|RPO1C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Archaeoglobus fulgidus (strain ATCC

Query: 3 FEDFVFPP 10
+DF FPP
Sbjct: 10 LKDFPFPP 17


>sp|PRIS_METMP|DNA primase small subunit PriS|Methanococcus maripaludis (strain DSM

Query: 4 EDFVFP 9
EDF+FP
Sbjct: 138 EDFLFP 143


>sp|PRIS_METM7|DNA primase small subunit PriS|Methanococcus maripaludis (strain C7 /

Query: 4 EDFVFP 9
EDF+FP
Sbjct: 138 EDFLFP 143


>sp|PRIS_METM6|DNA primase small subunit PriS|Methanococcus maripaludis (strain C6 /

Query: 4 EDFVFP 9
EDF+FP
Sbjct: 138 EDFLFP 143


>sp|PRIS_METM5|DNA primase small subunit PriS|Methanococcus maripaludis (strain C5 /

Query: 4 EDFVFP 9
EDF+FP
Sbjct: 138 EDFLFP 143


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain ATCC

Query: 2 PFEDFV 7
P+EDFV
Sbjct: 122 PYEDFV 127


>sp|SYR_SULTO|ARGININE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 FEDFVFPP 10
+E+F +PP
Sbjct: 27 YENFEYPP 34


>sp|AATC_PYRFU|A-TYPE ATP synthase subunit C|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PFEDFVFP 9
P +DFV P
Sbjct: 142 PAQDFVIP 149


>sp|NADM_METHJ|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PFEDFVFP 9
P+EDFV P
Sbjct: 139 PWEDFVPP 146


>sp|ASSY_METTH|ARGININOSUCCINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 EDFVFP 9
ED++FP
Sbjct: 74 EDYIFP 79


>sp|ACEA_HALVD|ISOCITRATE lyase|Haloferax volcanii (strain ATCC 29605

Query: 4 EDFVFPP 10
+DFVF P
Sbjct: 30 QDFVFAP 36


>sp|UVRC_METHJ|UVRABC system protein C|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 EDFVFP 9
E+FVFP
Sbjct: 272 EEFVFP 277


>sp|K6PF_THELI|ADP-SPECIFIC phosphofructokinase|Thermococcus litoralis

Query: 1 CPFEDF 6
C FEDF
Sbjct: 197 CRFEDF 202


>sp|GLNB2_METMP|NITROGEN fixation nifHD region glnB-like|Methanococcus maripaludis (strain

Query: 1 CPFEDFV 7
CP ED +
Sbjct: 103 CPIEDII 109


>sp|GLNB2_METMI|NITROGEN fixation nifHD region glnB-like|Methanococcus maripaludis

Query: 1 CPFEDFV 7
CP ED +
Sbjct: 103 CPIEDII 109


>sp|Y285_METS3|UPF0179 protein Msm_0285|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 CPFEDFVFP 9
C + D+ FP
Sbjct: 100 CEYYDYCFP 108


>sp|Y1292_METJA|UNCHARACTERIZED protein MJ1292|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PFEDFVF 8
PF DFV+
Sbjct: 148 PFYDFVY 154




736|Sequence|3676|3685|FVFPPSVSEN

>sp|RPO1C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Archaeoglobus fulgidus (strain ATCC

Query: 1 FVFPPSVSE 9
F FPP+V E
Sbjct: 13 FPFPPAVKE 21


>sp|HDG_METBF|HYPOXANTHINE DNA glycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 3 FPPSVSEN 10
FPP + EN
Sbjct: 6 FPPVIDEN 13


>sp|GLYA_METST|SERINE hydroxymethyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 1 FVFPPSVSE 9
F+FP VSE
Sbjct: 173 FLFPQPVSE 181


>sp|Y1216_PYRHO|PROBABLE ABC transporter permease protein|Pyrococcus horikoshii (strain

Query: 1 FVFPPS 6
FVFPP+
Sbjct: 48 FVFPPT 53


>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 3 FPPSVSE 9
FPP+V E
Sbjct: 421 FPPNVEE 427


>sp|RL4_SACS2|LARGE ribosomal subunit protein uL4|Saccharolobus solfataricus (strain

Query: 1 FVFPPSVSE 9
FPPSV++
Sbjct: 97 LAFPPSVNK 105




737|Sequence|3681|3690|SVSENVLKIS

>sp|SYFB_METAC|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SVSENVLKI 9
SVSEN+LKI
Sbjct: 85 SVSENILKI 93


>sp|DPCKG_THEKO|GTP-DEPENDENT dephospho-CoA kinase|Thermococcus kodakarensis (strain ATCC

Query: 2 VSENVLKI 9
V+ENVLKI
Sbjct: 50 VTENVLKI 57


>sp|SYFB_METMA|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SVSENVLKI 9
SVSE++LKI
Sbjct: 85 SVSEDILKI 93


>sp|Y577_METJA|UNIVERSAL stress protein MJ0577|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SVSENVLKIS 10
SV+ENV+K S
Sbjct: 141 SVTENVIKKS 150


>sp|PPSA_METTH|PROBABLE phosphoenolpyruvate synthase|Methanothermobacter thermautotrophicus

Query: 1 SVSENVLKIS 10
+++EN+LK++
Sbjct: 544 TLAENILKVA 553




738|Sequence|3686|3695|VLKISVKEQG

>sp|GLMM_METBU|PROBABLE phosphoglucosamine mutase|Methanococcoides burtonii (strain DSM

Query: 1 VLKISVKEQG 10
+LKI+VKE G
Sbjct: 212 LLKIAVKEFG 221




739|Sequence|3691|3700|VKEQGLFHKK

>sp|RIFK_PYRAB|RIBOFLAVIN kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 VKEQGLFHKK 10
+KEQG HK+
Sbjct: 47 LKEQGYIHKR 56




740|Sequence|3696|3705|LFHKKDSANQ

>sp|FAE_METBF|5,6,7,8-TETRAHYDROMETHANOPTERIN hydro-lyase|Methanosarcina barkeri (strain Fusaro /

Query: 4 KKDSANQ 10
KKDSAN
Sbjct: 169 KKDSANH 175


>sp|XAD_HALVD|D-XYLONATE dehydratase|Haloferax volcanii (strain ATCC 29605

Query: 3 HKKDSANQ 10
H+KD AN+
Sbjct: 193 HEKDRANR 200




741|Sequence|3701|3710|DSANQGCVRK

>sp|TRPD_PYRCJ|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 3 ANQGCVRK 10
AN GCV++
Sbjct: 182 ANPGCVKR 189


>sp|HUTI_THEAC|IMIDAZOLONEPROPIONASE acidophilum (strain ATCC 25905

Query: 4 NQGCVRK 10
N GCV+K
Sbjct: 241 NVGCVKK 247




742|Sequence|3706|3715|GCVRKVYLKD

>sp|REG1_PYRAB|UNCHARACTERIZED HTH-type transcriptional regulator PYRAB00550|Pyrococcus abyssi

Query: 3 VRKVYLKD 10
+RKVYLK+
Sbjct: 126 LRKVYLKN 133


>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 CVRKVYLKD 10
C +KV+++D
Sbjct: 536 CTKKVWVED 544


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GCVRKVYLKD 10
G +RK ++KD
Sbjct: 841 GVIRKEHIKD 850


>sp|RPO3_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Sulfolobus acidocaldarius (strain

Query: 1 GCVRKVYL 8
GC +VYL
Sbjct: 91 GCYNRVYL 98




743|Sequence|3711|3720|VYLKDTATAE

>sp|SPH3_HALVD|SMC-LIKE protein Sph3|Haloferax volcanii (strain ATCC 29605

Query: 2 YLKDTATAE 10
YL+D ATA+
Sbjct: 96 YLRDAATAD 104


>sp|TRUB_KORCO|PROBABLE tRNA pseudouridine synthase B|Korarchaeum cryptofilum (strain OPF8)

Query: 1 VYLKDTATA 9
+Y+KD+A A
Sbjct: 241 IYVKDSAVA 249


>sp|TRPB1_THEKO|TRYPTOPHAN synthase beta chain 1|Thermococcus kodakarensis (strain ATCC

Query: 2 YLKDTATAE 10
YLKD+ AE
Sbjct: 312 YLKDSGRAE 320


>sp|WECC_METM5|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 1 VYLKDTATAE 10
+Y+ D+ TAE
Sbjct: 195 IYITDSNTAE 204


>sp|WECC_METM7|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 1 VYLKDTATAE 10
+Y+ D+ TAE
Sbjct: 195 IYITDSNTAE 204


>sp|WECC_METJA|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VYLKDTATAE 10
+YL D TAE
Sbjct: 197 IYLTDAKTAE 206


>sp|WECC_METVS|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VYLKDTATAE 10
+Y+ D+ TAE
Sbjct: 195 IYITDSNTAE 204


>sp|VORA_METTM|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter marburgensis

Query: 1 VYLKDTATAE 10
+ L DTATA+
Sbjct: 384 IVLYDTATAD 393


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VYLKDTATAE 10
+YL D TAE
Sbjct: 310 IYLADYVTAE 319


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 2 YLKDTA 7
YLKDTA
Sbjct: 949 YLKDTA 954


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 YLKDTA 7
YLKDTA
Sbjct: 949 YLKDTA 954


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 YLKDTA 7
YLKDTA
Sbjct: 949 YLKDTA 954


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 YLKDTA 7
YLKDTA
Sbjct: 949 YLKDTA 954




744|Sequence|3716|3725|TATAERACNA

***** No hits found ******


745|Sequence|3721|3730|RACNAIEDAQ

>sp|AATA_METVS|A-TYPE ATP synthase subunit A|Methanococcus vannielii (strain ATCC 35089

Query: 1 RACNAIEDA 9
R NAIEDA
Sbjct: 89 RPLNAIEDA 97




746|Sequence|3726|3735|IEDAQSTRQQ

***** No hits found ******


747|Sequence|3731|3740|STRQQQKLMK

***** No hits found ******


748|Sequence|3736|3745|QKLMKQSSVR

***** No hits found ******


749|Sequence|3741|3753|QSSVRLLRPQLPS

>sp|SYM_METTH|METHIONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 RLLRPQLPS 13
+LLRP +PS
Sbjct: 483 KLLRPFMPS 491


>sp|RAD50_THEAC|DNA double-strand break repair Rad50|Thermoplasma acidophilum (strain

Query: 1 QSSVRLLRPQL 11
+ VRLL PQ+
Sbjct: 626 EDEVRLLEPQI 636


>sp|Y1619_METKA|DNA-BINDING protein MK1619|Methanopyrus kandleri (strain AV19 /

Query: 2 SSVRLLRPQL 11
+ VRL RPQL
Sbjct: 60 ARVRLARPQL 69


>sp|Y008_THEVO|DNA-BINDING protein TV0008|Thermoplasma volcanium (strain ATCC 51530

Query: 2 SSVRLLRPQLPS 13
++VRL+RP L
Sbjct: 59 NNVRLVRPDLAD 70


>sp|Y052_THEAC|DNA-BINDING protein Ta0052|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 SSVRLLRPQLPS 13
++VRL+RP L
Sbjct: 59 NNVRLVRPDLAD 70


>sp|Y1571_METTP|DNA-BINDING protein Mthe_1571|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 SSVRLLRPQL 11
SS+R+ RP+
Sbjct: 58 SSIRMTRPEF 67






THE END