UCHL1_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|PNIEMPKLQM

>sp|PHAC_HALHT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloarcula hispanica (strain ATCC 33960

Query: 2 NIEMPKLQM 10
NI+MP LQ+
Sbjct: 304 NIDMPVLQL 312


>sp|PHAC_HALMA|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloarcula marismortui (strain ATCC 43049

Query: 2 NIEMPKLQM 10
NI+MP LQ+
Sbjct: 304 NIDMPVLQL 312


>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PNIEMPKLQM 10
PN PK+QM
Sbjct: 145 PNCNSPKIQM 154


>sp|MTD_METS3|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanobrevibacter

Query: 2 NIEMPKL 8
NIE+PKL
Sbjct: 167 NIELPKL 173


>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PNIEMPKLQM 10
P I MPK+++
Sbjct: 498 PKISMPKIKL 507


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 PNIEMPKLQ 9
P +E PKLQ
Sbjct: 942 PFLETPKLQ 950


>sp|ACDB_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit beta|Archaeoglobus fulgidus

Query: 1 PNIEMPKLQM 10
P ++P LQM
Sbjct: 478 PGFQLPALQM 487




2|SequenceR|15|6|KNLMEPNIEM

>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 1 KNLMEPNIEM 10
+NL+EP++ M
Sbjct: 408 RNLVEPDVRM 417


>sp|MFNA_METHJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanospirillum hungatei JF-1

Query: 1 KNLMEPNI 8
KN+ EPNI
Sbjct: 104 KNVKEPNI 111




3|SequenceR|20|11|LRSLVKNLME

>sp|NUSA_SULAC|PROBABLE transcription termination protein NusA|Sulfolobus acidocaldarius

Query: 1 LRSLVKNLM 9
L LVKNLM
Sbjct: 77 LEDLVKNLM 85




4|SequenceR|25|16|QGAVGLRSLV

>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain DSM

Query: 1 QGAVGLRSL 9
+G VG+RSL
Sbjct: 730 KGRVGVRSL 738




5|SequenceR|30|21|DVFRWQGAVG

>sp|Y1105_METKA|PUTATIVE nickel insertion protein|Methanopyrus kandleri (strain AV19 /

Query: 1 DVFRWQGAVG 10
++FRW G +G
Sbjct: 311 ELFRWTGTLG 320


>sp|Y1287_METJA|UNCHARACTERIZED protein MJ1287|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DVFRW 5
DVFRW
Sbjct: 198 DVFRW 202


>sp|SYC_THEAC|CYSTEINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DVFRW 5
DVFRW
Sbjct: 386 DVFRW 390


>sp|SYR_METJA|ARGININE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VFRWQGAV 9
VFRW+ A+
Sbjct: 431 VFRWEEAL 438


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DVFRWQGAVG 10
D FR GAVG
Sbjct: 542 DAFRQWGAVG 551


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DVFRWQGAVG 10
D FR GAVG
Sbjct: 542 DAFRQWGAVG 551


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DVFRWQGAVG 10
D FR GAVG
Sbjct: 542 DAFRQWGAVG 551


>sp|PURL_PYRCJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 VFRWQGAV 9
VF+W+G V
Sbjct: 333 VFKWRGEV 340


>sp|CAS1_METKA|CRISPR-ASSOCIATED endonuclease Cas1|Methanopyrus kandleri (strain AV19 /

Query: 1 DVFRWQG 7
++FRW+G
Sbjct: 259 EMFRWKG 265


>sp|MTRD_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanopyrus kandleri (strain AV19

Query: 2 VFRWQGAVG 10
V W GA+G
Sbjct: 69 VILWNGALG 77




6|SequenceR|35|26|ELGLVDVFRW

>sp|Y2678_METMA|UNCHARACTERIZED serpin-like protein MM_2675|Methanosarcina mazei (strain ATCC

Query: 1 ELGLVDVFR 9
E+G+VD FR
Sbjct: 330 EMGVVDAFR 338


>sp|Y424_METJA|UNCHARACTERIZED protein MJ0424|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ELGLVDVFRW 10
++GLVD+FR+
Sbjct: 31 DVGLVDLFRY 40


>sp|SYC_THEAC|CYSTEINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 VDVFRW 10
+DVFRW
Sbjct: 385 IDVFRW 390


>sp|Y1657_METJA|UNCHARACTERIZED protease MJ1657|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GLVDVFR 9
GLVD+F+
Sbjct: 246 GLVDIFK 252


>sp|HIS52_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 ELGLVDVF 8
ELGL+D+
Sbjct: 58 ELGLIDIL 65


>sp|ADEC_CENSY|ADENINE deaminase|Cenarchaeum symbiosum (strain A)

Query: 2 LGLVDVFRW 10
LG+ +VF W
Sbjct: 173 LGMGEVFSW 181


>sp|Y3388_METAC|UNCHARACTERIZED serpin-like protein MA_3388|Methanosarcina acetivorans (strain ATCC

Query: 1 ELGLVDVF 8
E+G+VD F
Sbjct: 330 EMGVVDAF 337


>sp|Y2246_METAC|UNCHARACTERIZED serpin-like protein MA_2246|Methanosarcina acetivorans (strain ATCC

Query: 1 ELGLVDVF 8
E+G+VD F
Sbjct: 331 EMGVVDAF 338


>sp|AOR_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus furiosus (strain ATCC

Query: 1 ELGLVDVFRW 10
ELG FRW
Sbjct: 367 ELGDAPPFRW 376


>sp|AOR_THEKO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Thermococcus kodakarensis

Query: 1 ELGLVDVFRW 10
ELG FRW
Sbjct: 367 ELGDAPPFRW 376


>sp|DPOL3_SACSH|DNA polymerase 3|Saccharolobus shibatae (strain ATCC 51178

Query: 5 VDVFRW 10
VDVF W
Sbjct: 235 VDVFHW 240


>sp|DNLI_METMJ|DNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 ELGLVDVFR 9
EL L+DV+R
Sbjct: 110 ELDLLDVYR 118




7|SequenceR|40|31|GLSEEELGLV

>sp|TOP6A_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 GLSEEELGLV 10
G++ EELGL+
Sbjct: 123 GMTREELGLM 132


>sp|SYFB_KORCO|PHENYLALANINE--TRNA ligase beta subunit|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GLSEEELGL 9
G+S EELGL
Sbjct: 64 GISNEELGL 72


>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 GLSEEELGL 9
GL+EEEL
Sbjct: 950 GLTEEELAF 958


>sp|PRIS_METJA|DNA primase small subunit PriS|Methanocaldococcus jannaschii (strain

Query: 1 GLSEEELGLV 10
GL+EE+L +V
Sbjct: 138 GLNEEDLKIV 147


>sp|TRMY_PYRHO|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus horikoshii

Query: 1 GLSEEEL 7
GLSEE+L
Sbjct: 161 GLSEEDL 167


>sp|APE1_SULTO|PROBABLE aminopeptidase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 SEEELGLV 10
S EELGLV
Sbjct: 511 SYEELGLV 518


>sp|RTCB_ARCFU|TRNA-SPLICING ligase RtcB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GLSEEELGL 9
G+SE++LG+
Sbjct: 314 GMSEDDLGM 322


>sp|MFNA_METPE|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosphaerula palustris

Query: 1 GLSEEEL 7
GL+EEEL
Sbjct: 5 GLAEEEL 11


>sp|DNLI_META3|DNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GLSEEEL 7
GL+EEEL
Sbjct: 474 GLTEEEL 480


>sp|COABC_THEKO|COENZYME A biosynthesis bifunctional protein|Thermococcus kodakarensis

Query: 1 GLSEEEL 7
GLSEEEL
Sbjct: 335 GLSEEEL 341


>sp|KCY_STAMF|CYTIDYLATE kinase|Staphylothermus marinus (strain ATCC 43588

Query: 1 GLSEEELGLV 10
GLS EEL ++
Sbjct: 44 GLSLEELSII 53


>sp|AMYA_PYRHO|ALPHA-AMYLASE horikoshii (strain ATCC 700860

Query: 2 LSEEELGLV 10
+S+EELGL+
Sbjct: 538 VSKEELGLM 546




8|SequenceR|45|36|PAPVSGLSEE

>sp|Y289_METJA|UNCHARACTERIZED protein MJ0289|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PAPVSGLS 8
PAP +GLS
Sbjct: 210 PAPFTGLS 217


>sp|PSB_METMP|PROTEASOME subunit beta|Methanococcus maripaludis (strain DSM 14266

Query: 3 PVSGLSEE 10
PV G++EE
Sbjct: 131 PVGGINEE 138


>sp|PSB_METM7|PROTEASOME subunit beta|Methanococcus maripaludis (strain C7 /

Query: 3 PVSGLSEE 10
PV G++EE
Sbjct: 131 PVGGINEE 138


>sp|PSB_METM6|PROTEASOME subunit beta|Methanococcus maripaludis (strain C6 /

Query: 3 PVSGLSEE 10
PV G++EE
Sbjct: 131 PVGGINEE 138


>sp|PSB_METM5|PROTEASOME subunit beta|Methanococcus maripaludis (strain C5 /

Query: 3 PVSGLSEE 10
PV G++EE
Sbjct: 131 PVGGINEE 138


>sp|GCSH2_SULAC|PROBABLE glycine cleavage system H|Sulfolobus acidocaldarius (strain ATCC

Query: 1 PAPVSG 6
PAPVSG
Sbjct: 79 PAPVSG 84


>sp|ENDA_HALSA|TRNA-SPLICING endonuclease|Halobacterium salinarum (strain ATCC 700922

Query: 3 PVSGLSE 9
PV GLSE
Sbjct: 131 PVDGLSE 137


>sp|ENDA_HALS3|TRNA-SPLICING endonuclease|Halobacterium salinarum (strain ATCC 29341

Query: 3 PVSGLSE 9
PV GLSE
Sbjct: 131 PVDGLSE 137


>sp|PSB_METVS|PROTEASOME subunit beta|Methanococcus vannielii (strain ATCC 35089

Query: 3 PVSGLSEE 10
PV G++EE
Sbjct: 131 PVGGINEE 138


>sp|TRPE2_HALSA|ANTHRANILATE synthase component 1 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 PAPVSGLSE 9
PAP SG+ E
Sbjct: 258 PAPYSGIVE 266




9|SequenceR|50|41|LLACAPAPVS

>sp|Y1771_AERPE|MEMO1 family protein APE_1771|Aeropyrum pernix (strain ATCC 700893

Query: 3 ACAPAPVS 10
AC P+P++
Sbjct: 235 ACGPSPIA 242




10|SequenceR|55|46|LPFLLLLACA

***** No hits found ******


11|SequenceR|60|51|EHQATLPFLL

>sp|GSA_HALMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloarcula marismortui (strain ATCC 43049

Query: 1 EHQATLPF 8
EH T+PF
Sbjct: 171 EHTLTVPF 178




12|SequenceR|65|56|KKRFNEHQAT

>sp|PUR7_CENSY|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Cenarchaeum symbiosum (strain A)

Query: 1 KKRFNEHQA 9
KKRF+E +A
Sbjct: 231 KKRFDEERA 239


>sp|RL37A_SACS2|LARGE ribosomal subunit protein eL43|Saccharolobus solfataricus (strain

Query: 1 KKRFNEHQ 8
+KR++EHQ
Sbjct: 28 EKRYDEHQ 35


>sp|MCRA_METFE|METHYL-COENZYME M reductase subunit alpha|Methanothermus fervidus

Query: 2 KRFNEHQA 9
K+F EHQA
Sbjct: 189 KQFPEHQA 196


>sp|PGK_METLZ|PHOSPHOGLYCERATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 KRFNEHQAT 10
KRF EH T
Sbjct: 37 KRFREHIPT 45


>sp|AROA_PYRFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KRFNEHQAT 10
K FN+H+ T
Sbjct: 360 KTFNDHRIT 368


>sp|SYFB_THEVO|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KRFNEHQA 9
KRF++H++
Sbjct: 470 KRFSDHES 477


>sp|EF1A_THEVO|ELONGATION factor 1-alpha|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KKRFNEHQA 9
+KRFNE +A
Sbjct: 159 EKRFNEVKA 167


>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FNEHQ 8
FNEHQ
Sbjct: 830 FNEHQ 834




13|SequenceR|70|61|LEEIQKKRFN

>sp|PELO_METVS|PROTEIN pelota homolog|Methanococcus vannielii (strain ATCC 35089

Query: 1 LEEIQKKRF 9
LEEI KKR
Sbjct: 264 LEEISKKRL 272


>sp|GATA_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Archaeoglobus fulgidus (strain ATCC

Query: 1 LEEIQKKRFN 10
LE I+K R N
Sbjct: 23 LERIEKSRLN 32


>sp|PGK2_METM7|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C7 /

Query: 2 EEIQKKRF 9
EEI KKRF
Sbjct: 232 EEIHKKRF 239


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 EEIQKKRFN 10
EE++K RFN
Sbjct: 630 EEMEKYRFN 638


>sp|KCY_STAMF|CYTIDYLATE kinase|Staphylothermus marinus (strain ATCC 43588

Query: 2 EEIQKKRF 9
E +QKKRF
Sbjct: 128 EYVQKKRF 135


>sp|Y4116_METAC|DNA-BINDING protein MA_4116|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LEEIQKKRF 9
LEEI+K+R
Sbjct: 11 LEEIRKRRL 19


>sp|TMCA_THEKO|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus kodakarensis (strain

Query: 1 LEEIQKKRFN 10
L EIQKKR +
Sbjct: 717 LTEIQKKRLD 726


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EEIQKKRFN 10
EE++K RFN
Sbjct: 633 EELEKYRFN 641


>sp|Y803_METMA|DNA-BINDING protein MM_0803|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LEEIQKKRF 9
LEEI+K+R
Sbjct: 10 LEEIRKRRL 18


>sp|Y2204_ARCFU|UNCHARACTERIZED protein AF_2204|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LEEIQKKRF 9
LEE+Q+ RF
Sbjct: 41 LEEMQRYRF 49


>sp|TMCA_THES3|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus sp. (strain AM4)

Query: 1 LEEIQKKRFN 10
L EIQKKR +
Sbjct: 716 LTEIQKKRLD 725


>sp|KTHY_METLZ|PROBABLE thymidylate kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LEEIQKK 7
LEE+QKK
Sbjct: 154 LEEVQKK 160


>sp|Y1467_METJA|UNCHARACTERIZED protein MJ1467|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EIQKKRFN 10
+++KKRFN
Sbjct: 28 KLEKKRFN 35


>sp|PRIL_METMA|DNA primase large subunit PriL|Methanosarcina mazei (strain ATCC

Query: 3 EIQKKRFN 10
E+QKK+F
Sbjct: 208 EVQKKKFG 215


>sp|PRIL_METAC|DNA primase large subunit PriL|Methanosarcina acetivorans (strain ATCC

Query: 3 EIQKKRFN 10
E+QKK+F
Sbjct: 208 EVQKKKFG 215


>sp|Y1460_METJA|UNCHARACTERIZED protein MJ1460|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LEEIQKKRF 9
LEEI KK+F
Sbjct: 127 LEEIFKKKF 135




14|SequenceR|75|66|VEQGKLEEIQ

>sp|PURP_PYRHO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus horikoshii (strain ATCC

Query: 1 VEQGKLEEI 9
+E+GKLEE+
Sbjct: 323 IEEGKLEEV 331


>sp|Y1567_METJA|UNCHARACTERIZED protein MJ1567|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VEQGKLEEIQ 10
+E G+L+EIQ
Sbjct: 123 LENGRLKEIQ 132


>sp|Y659_METJA|UNCHARACTERIZED protein MJ0659|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VEQGKLEEI 9
+E+GK+EE+
Sbjct: 9 IEEGKIEEV 17


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 VEQGKLEEIQ 10
VE+GK +EI+
Sbjct: 649 VEEGKTDEIE 658


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 VEQGKLEEIQ 10
VE+GK +EI+
Sbjct: 649 VEEGKTDEIE 658


>sp|RPIA_PYRFU|RIBOSE-5-PHOSPHATE isomerase A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VEQGKLEEI 9
+E+GK+E+I
Sbjct: 43 IEKGKVEDI 51


>sp|AMPD_METMA|ANHYDROMEVALONATE phosphate decarboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EQGKLEEIQ 10
E GKL EIQ
Sbjct: 12 ENGKLVEIQ 20




15|SequenceR|80|71|YVKPSVEQGK

>sp|KTHY_METBU|PROBABLE thymidylate kinase|Methanococcoides burtonii (strain DSM 6242

Query: 2 VKPSVEQGK 10
++P++E+GK
Sbjct: 76 IRPAIEEGK 84


>sp|Y1609_METJA|UNCHARACTERIZED ATP-binding protein MJ1609|Methanocaldococcus jannaschii (strain

Query: 1 YVKPSVEQG 9
Y+KP VE G
Sbjct: 299 YIKPKVEVG 307


>sp|KTHY_THEGJ|PROBABLE thymidylate kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 VKPSVEQGK 10
+KP++E GK
Sbjct: 87 IKPALESGK 95


>sp|KTHY_METAC|PROBABLE thymidylate kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VKPSVEQGK 10
VKP++E GK
Sbjct: 79 VKPALEDGK 87


>sp|KTHY_METBF|PROBABLE thymidylate kinase|Methanosarcina barkeri (strain Fusaro /

Query: 2 VKPSVEQGK 10
+KP++E GK
Sbjct: 79 IKPALENGK 87


>sp|MVHA_METTH|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter thermautotrophicus

Query: 1 YVKPSVE 7
Y+KP VE
Sbjct: 417 YIKPGVE 423


>sp|MVHA_METTM|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter marburgensis (strain ATCC

Query: 1 YVKPSVE 7
Y+KP VE
Sbjct: 417 YIKPGVE 423


>sp|SYE_NITMS|GLUTAMATE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 VKPSVEQGK 10
+KP +E+GK
Sbjct: 340 IKPLIEEGK 348


>sp|SPEE_PYRAR|POLYAMINE aminopropyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 YVKPSVEQGK 10
YVK ++E+G+
Sbjct: 147 YVKRALEEGR 156


>sp|Y147_METJA|UNCHARACTERIZED ATP-binding protein MJ0147|Methanocaldococcus jannaschii (strain

Query: 1 YVKPSVE 7
Y+KP VE
Sbjct: 293 YIKPKVE 299


>sp|SYE_KORCO|GLUTAMATE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 YVKPSVEQG 9
Y++P VE G
Sbjct: 343 YIRPLVESG 351




16|SequenceR|85|76|TQKMFYVKPS

>sp|RS8_METIG|SMALL ribosomal subunit protein uS8|Methanotorris igneus (Methanococcus

Query: 2 QKMFYVKPS 10
+K+FY+KP+
Sbjct: 22 KKVFYIKPA 30


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 TQKMFYVKP 9
T+K+FY +P
Sbjct: 513 TRKLFYERP 521


>sp|GSA_METB6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanoregula boonei (strain DSM 21154

Query: 2 QKMFYVKP 9
Q+MF VKP
Sbjct: 246 QRMFGVKP 253


>sp|UBIX_AERPE|FLAVIN prenyltransferase UbiX|Aeropyrum pernix (strain ATCC 700893

Query: 5 FYVKPS 10
FY+KPS
Sbjct: 158 FYIKPS 163


>sp|NCPP_SACI7|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus (strain

Query: 2 QKMFYVKP 9
+KM YV+P
Sbjct: 151 RKMLYVQP 158


>sp|NCPP_SACI6|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus (strain

Query: 2 QKMFYVKP 9
+KM YV+P
Sbjct: 151 RKMLYVQP 158


>sp|NCPP_SACI4|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus (strain

Query: 2 QKMFYVKP 9
+KM YV+P
Sbjct: 151 RKMLYVQP 158


>sp|NCPP_SACI3|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus (strain

Query: 2 QKMFYVKP 9
+KM YV+P
Sbjct: 151 RKMLYVQP 158


>sp|NCPP_SACI2|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus (strain

Query: 2 QKMFYVKP 9
+KM YV+P
Sbjct: 151 RKMLYVQP 158


>sp|NCPP_SACI1|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus islandicus (strain

Query: 2 QKMFYVKP 9
+KM YV+P
Sbjct: 151 RKMLYVQP 158


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 TQKMFYVKPS 10
T+K FY +P+
Sbjct: 512 TRKSFYERPA 521


>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 TQKMFYVKP 9
T+K++Y +P
Sbjct: 520 TEKLYYEEP 528


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 TQKMFYVKP 9
T+ M+Y KP
Sbjct: 503 TEPMYYEKP 511




17|SequenceR|90|81|CSNGITQKMF

>sp|GGR_THEGJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 CSNGITQKMF 10
C+ GI+ K+F
Sbjct: 45 CAEGISIKVF 54


>sp|P5CR_METSM|PYRROLINE-5-CARBOXYLATE reductase|Methanobrevibacter smithii

Query: 3 NGITQK 8
NGITQK
Sbjct: 233 NGITQK 238




18|SequenceR|95|86|LGITGCSNGI

>sp|FSR_METJA|COENZYME F420-dependent sulfite reductase|Methanocaldococcus jannaschii

Query: 1 LGITGCSNG 9
+ I+GC NG
Sbjct: 463 IAISGCPNG 471


>sp|Y730_METJA|UNCHARACTERIZED protein MJ0730|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GITGCSN 8
GITGC +
Sbjct: 7 GITGCGD 13


>sp|KORB_ARCFU|2-OXOGLUTARATE synthase subunit KorB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 GCSNGI 10
GC NGI
Sbjct: 21 GCPNGI 26


>sp|PUR2_THEGJ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LGITGCSNGI 10
+G CSNG+
Sbjct: 228 MGSYSCSNGL 237


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GITGCSNG 9
GITG NG
Sbjct: 649 GITGYENG 656


>sp|KORB_METJA|2-OXOGLUTARATE synthase subunit KorB|Methanocaldococcus jannaschii (strain ATCC

Query: 4 TGCSNGI 10
+GC NGI
Sbjct: 19 SGCGNGI 25


>sp|KORB_METTM|2-OXOGLUTARATE synthase subunit KorB|Methanothermobacter marburgensis (strain

Query: 5 GCSNGI 10
GC NGI
Sbjct: 24 GCGNGI 29




19|SequenceR|100|91|AVAHILGITG

>sp|PYRI_PYRIL|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum islandicum

Query: 1 AVAHILGITG 10
AV ILGITG
Sbjct: 26 AVLRILGITG 35


>sp|Y274_PYRHO|PUTATIVE GTPase PH0274|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 AHILGITG 10
AHI+GITG
Sbjct: 47 AHIVGITG 54


>sp|PYRI_PYRNV|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum neutrophilum

Query: 1 AVAHILGITG 10
AV +LGITG
Sbjct: 26 AVLRVLGITG 35


>sp|PYRI_PYRAR|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum arsenaticum

Query: 1 AVAHILGITG 10
AV +LGITG
Sbjct: 26 AVLRVLGITG 35


>sp|Y1289_ARCFU|PUTATIVE GTPase AF_1289|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 AHILGITG 10
AH++G+TG
Sbjct: 46 AHVVGLTG 53


>sp|BIOY_PYRHO|PROBABLE biotin transporter BioY|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VAHILGITG 10
+AHILG TG
Sbjct: 75 IAHILGPTG 83


>sp|CYAS_METBU|CYSTEATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 AVAHILGITG 10
A AH+ ITG
Sbjct: 135 AFAHVASITG 144


>sp|RNP2_METTH|RIBONUCLEASE P protein component 2|Methanothermobacter thermautotrophicus

Query: 4 HILGITG 10
HILG++G
Sbjct: 100 HILGLSG 106


>sp|AATE_PYRNV|A-TYPE ATP synthase subunit E|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 AVAHILGITG 10
AVA LG+TG
Sbjct: 133 AVARNLGLTG 142


>sp|PYRI_METHJ|ASPARTATE carbamoyltransferase regulatory chain|Methanospirillum hungatei

Query: 2 VAHILGITG 10
V ILGITG
Sbjct: 32 VLRILGITG 40


>sp|PYRI_METMJ|ASPARTATE carbamoyltransferase regulatory chain|Methanoculleus marisnigri

Query: 2 VAHILGITG 10
V ILGITG
Sbjct: 32 VLRILGITG 40


>sp|GLYA_STAMF|SERINE hydroxymethyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 2 VAHILG-ITG 10
VAH+LG ITG
Sbjct: 203 VAHVLGLITG 212


>sp|Y249_PYRAB|PUTATIVE GTPase PYRAB02490|Pyrococcus abyssi (strain GE5 /

Query: 3 AHILGITG 10
A+I+GITG
Sbjct: 45 AYIVGITG 52


>sp|MTAP_THEKO|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 AHILGIT 9
AHI+G+T
Sbjct: 175 AHIIGMT 181


>sp|PYRI_STAMF|ASPARTATE carbamoyltransferase regulatory chain|Staphylothermus marinus

Query: 2 VAHILGITG 10
V +LGITG
Sbjct: 35 VLRVLGITG 43


>sp|PYRI_PYRCJ|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum calidifontis

Query: 2 VAHILGITG 10
V +LGITG
Sbjct: 27 VLRVLGITG 35


>sp|TF2B_AERPE|TRANSCRIPTION initiation factor IIB|Aeropyrum pernix (strain ATCC 700893

Query: 2 VAHILGIT 9
+AH++G+T
Sbjct: 285 IAHVVGVT 292


>sp|DAPF_ARCFU|DIAMINOPIMELATE epimerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AVAHILGITG 10
A+A+ LG+TG
Sbjct: 227 AIANRLGLTG 236




20|SequenceR|105|96|KDQNNAVAHI

>sp|KAE1_STAMF|TRNA N6-adenosine threonylcarbamoyltransferase|Staphylothermus marinus

Query: 4 NNAVAHI 10
N+AVAHI
Sbjct: 109 NHAVAHI 115


>sp|KAE1_HYPBU|TRNA N6-adenosine threonylcarbamoyltransferase|Hyperthermus butylicus

Query: 4 NNAVAHI 10
N+AVAHI
Sbjct: 137 NHAVAHI 143


>sp|KDGA_THETE|2-DEHYDRO-3-DEOXY-D-GLUCONATE/2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE aldolase|Thermoproteus tenax

Query: 1 KDQNNAVAH 9
KD N ++AH
Sbjct: 173 KDTNESLAH 181


>sp|KAE1_AERPE|TRNA N6-adenosine threonylcarbamoyltransferase|Aeropyrum pernix (strain

Query: 4 NNAVAHI 10
N+AVAH+
Sbjct: 116 NHAVAHV 122




21|SequenceR|110|101|DEFGLKDQNN

>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DEFGLKDQNN 10
+E G+KDQN+
Sbjct: 366 NELGVKDQND 375


>sp|AGLB1_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DEFGLKDQNN 10
DE +KD NN
Sbjct: 520 DEITMKDANN 529


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DEFGLKDQNN 10
++FG+KDQ++
Sbjct: 369 EQFGVKDQDD 378


>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 3 FGLKDQNN 10
+GLKD++N
Sbjct: 344 YGLKDRSN 351


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DEFGLKDQNN 10
++ G+KDQN+
Sbjct: 383 EKLGIKDQND 392


>sp|TRPD_SULTO|ANTHRANILATE phosphoribosyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DEFGLKDQ 8
++FGLKD+
Sbjct: 249 NDFGLKDE 256


>sp|HELS_METVS|ATP-DEPENDENT DNA helicase Hel308|Methanococcus vannielii (strain ATCC 35089

Query: 1 DEFGLK 6
DEFGLK
Sbjct: 737 DEFGLK 742


>sp|KHSE_METVS|HOMOSERINE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 DEFGLK 6
DEFG+K
Sbjct: 39 DEFGIK 44


>sp|SYW_THEVO|TRYPTOPHAN--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 EFGLKDQNN 10
EFG+ DQ++
Sbjct: 19 EFGISDQSD 27


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 DEFGLKDQNN 10
++ G+KDQN+
Sbjct: 383 EKLGVKDQND 392


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 DEFGLKDQNN 10
++ G+KDQN+
Sbjct: 383 EKLGVKDQND 392


>sp|PELO_AERPE|PROTEIN pelota homolog|Aeropyrum pernix (strain ATCC 700893

Query: 1 DEFGLK 6
DEFG+K
Sbjct: 85 DEFGVK 90


>sp|RS3A_NANEQ|SMALL ribosomal subunit protein eS1|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 DEFGLKDQNN 10
D F +KD++N
Sbjct: 102 DSFVIKDKDN 111


>sp|RS3_ARCFU|SMALL ribosomal subunit protein uS3|Archaeoglobus fulgidus (strain ATCC

Query: 1 DEFGLKDQN 9
DEF +KD N
Sbjct: 190 DEFEVKDVN 198


>sp|SYR_ARCFU|ARGININE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DEFGLKDQ 8
++FGLKD+
Sbjct: 165 EKFGLKDK 172




22|SequenceR|115|106|KLVSGDEFGL

>sp|FSX1_NATA2|FUSEXIN 1|Natrinema altunense (strain JCM 12890

Query: 3 VSGDEFG 9
V GDEFG
Sbjct: 375 VEGDEFG 381


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 KLVSGDEFG 9
+L+S DEFG
Sbjct: 559 ELISIDEFG 567


>sp|METXA_METMS|HOMOSERINE O-acetyltransferase|Methanohalophilus mahii (strain ATCC 35705

Query: 1 KLVSGDEFG 9
+LVSGDE
Sbjct: 21 RLVSGDELA 29


>sp|FDHD_METTH|SULFUR carrier protein FdhD|Methanothermobacter thermautotrophicus (strain

Query: 2 LVSGDEF 8
LV+GDEF
Sbjct: 149 LVTGDEF 155


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 LVSGDEFG 9
L+S DEFG
Sbjct: 576 LISIDEFG 583


>sp|Y1569_METJA|PUTATIVE metal transport protein MJ1569|Methanocaldococcus jannaschii

Query: 2 LVSGDEFGL 10
+V+G EFGL
Sbjct: 151 IVAGFEFGL 159


>sp|PUR7_SACS2|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KLVSGDEFGL 10
KLV GDE L
Sbjct: 184 KLVIGDEISL 193


>sp|ARTA_HALVD|ARCHAEOSORTASE A|Haloferax volcanii (strain ATCC 29605

Query: 2 LVSGDEFGL 10
+V+GDE+ L
Sbjct: 288 MVTGDEYDL 296


>sp|FOLCP_HALVD|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 3 VSGDEFG 9
VSG EFG
Sbjct: 491 VSGHEFG 497


>sp|PROB_METAC|GLUTAMATE 5-kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KLVSGDEFG 9
K++SG+E G
Sbjct: 260 KILSGEEIG 268


>sp|HACB_METMA|METHANOGEN homoaconitase small subunit|Methanosarcina mazei (strain ATCC

Query: 2 LVSGDEFG 9
+V+GD FG
Sbjct: 58 IVAGDNFG 65


>sp|G6PI_HALSA|PROBABLE glucose-6-phosphate isomerase|Halobacterium salinarum (strain

Query: 3 VSGDEFG 9
+ GDEFG
Sbjct: 40 MDGDEFG 46


>sp|CBIX_HALSA|PROBABLE sirohydrochlorin cobaltochelatase|Halobacterium salinarum (strain

Query: 5 GDEFGL 10
GD+FGL
Sbjct: 142 GDDFGL 147




23|SequenceR|120|111|ESLFQKLVSG

>sp|TOP6B_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 1 ESLFQKLVSG 10
E L++KLVSG
Sbjct: 294 EKLYEKLVSG 303


>sp|DNAJ_HALMT|CHAPERONE protein DnaJ|Haloferax mediterranei (strain ATCC 33500

Query: 1 ESLFQKL 7
ESLFQKL
Sbjct: 374 ESLFQKL 380


>sp|GGGPS_META3|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 ESLFQKLVSG 10
E+ +QK++SG
Sbjct: 207 ETAYQKVLSG 216


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ESLFQKLV 8
E LF+KLV
Sbjct: 3 EDLFEKLV 10


>sp|GSA_ARCFU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SLFQKLVSG 10
SL +KLVSG
Sbjct: 323 SLTEKLVSG 331




24|SequenceR|125|116|SMKETESLFQ

>sp|IPYR_PICTO|INORGANIC pyrophosphatase|Picrophilus torridus (strain ATCC 700027

Query: 2 MKETESLFQ 10
+KETE+ F+
Sbjct: 134 LKETENFFE 142




25|SequenceR|130|121|ARDEPSMKET

***** No hits found ******


26|SequenceR|135|126|KEFCKARDEP

>sp|COFC_METHJ|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 FCKARDEP 10
FC+ DEP
Sbjct: 85 FCEGNDEP 92


>sp|DEOC_THEVO|DEOXYRIBOSE-PHOSPHATE aldolase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KEFCKA 6
KEFCK+
Sbjct: 166 KEFCKS 171


>sp|Y717_METJA|UNCHARACTERIZED protein MJ0717|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EFCKARDE 9
EFCK DE
Sbjct: 8 EFCKKMDE 15


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KEFCKAR 7
+EFC++R
Sbjct: 273 REFCRSR 279


>sp|ARSA_METJA|PUTATIVE arsenical pump-driving ATPase|Methanocaldococcus jannaschii (strain

Query: 2 EFCKARDE 9
+FC+AR E
Sbjct: 284 DFCRARRE 291


>sp|MUTS2_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 3 FCKARDE 9
FC RDE
Sbjct: 556 FCAVRDE 562


>sp|CETZ_PYRHO|TUBULIN-LIKE protein CetZ|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KEFCKARDE 9
+EF KA++E
Sbjct: 331 REFMKAKEE 339


>sp|PCNA_ARCFU|DNA polymerase sliding clamp|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KEFCK 5
KEFCK
Sbjct: 199 KEFCK 203


>sp|CETZ_PYRAB|TUBULIN-LIKE protein CetZ|Pyrococcus abyssi (strain GE5 /

Query: 1 KEFCKARDE 9
+EF KA++E
Sbjct: 331 REFMKAKEE 339




27|SequenceR|140|131|QIAENKEFCK

>sp|DEOC_THEVO|DEOXYRIBOSE-PHOSPHATE aldolase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 NKEFCK 10
+KEFCK
Sbjct: 165 DKEFCK 170


>sp|Y1695_PYRFU|UNCHARACTERIZED lipoprotein PF1695|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QIAENKEF 8
Q+AE+KE+
Sbjct: 85 QLAESKEY 92


>sp|PYRK_METKA|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanopyrus kandleri

Query: 1 QIAENKEFCK 10
++ EN+E C+
Sbjct: 10 EVVENREECE 19




28|SequenceR|145|136|ADHAAQIAEN

>sp|NADE_METJA|NH(3)-DEPENDENT NAD(+) synthetase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 DHAAQIAEN 10
+HA +AEN
Sbjct: 72 EHAKMVAEN 80


>sp|FLPA_METM7|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis

Query: 3 HAAQIAEN 10
H A IAEN
Sbjct: 91 HVADIAEN 98


>sp|FLPA_METM5|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis

Query: 3 HAAQIAEN 10
H A IAEN
Sbjct: 91 HVADIAEN 98


>sp|FLPA_METMP|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis

Query: 3 HAAQIAEN 10
H A IAEN
Sbjct: 91 HVADIAEN 98


>sp|CAPPA_METMA|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 HAAQIAEN 10
HA ++AEN
Sbjct: 170 HAKELAEN 177




29|SequenceR|150|141|GEQAVADHAA

>sp|SYL_HALSA|LEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GEQAVADHAA 10
GEQA DH A
Sbjct: 2 GEQATYDHHA 11


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GEQAVADHAA 10
G+ A+A+HAA
Sbjct: 255 GDAAIAEHAA 264


>sp|COFE_METMA|COENZYME F420:L-glutamate ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EQAVADHAA 10
EQA+AD A
Sbjct: 191 EQAIADELA 199


>sp|KTHY_METHJ|PROBABLE thymidylate kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 VADHAA 10
VADHAA
Sbjct: 62 VADHAA 67




30|SequenceR|155|146|DVRCQGEQAV

>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 3 RCQGEQAV 10
RC GE+AV
Sbjct: 25 RCAGERAV 32


>sp|RL18_METHJ|LARGE ribosomal subunit protein uL18|Methanospirillum hungatei JF-1

Query: 1 DVRCQGEQ 8
D RC+GE
Sbjct: 140 DERCKGEH 147


>sp|SYM_HALSA|METHIONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DVRCQGEQAV 10
D+R GE+AV
Sbjct: 442 DLRTAGERAV 451


>sp|TRPD_PYRIL|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 VRCQGEQA 9
+RC+GE A
Sbjct: 43 MRCRGETA 50


>sp|MDH_METJA|L-MALATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DVRCQGEQAV 10
DV+ +GEQ +
Sbjct: 213 DVKTKGEQII 222


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 1 DVRCQGEQ 8
DV C GE+
Sbjct: 749 DVLCDGEE 756




31|SequenceR|160|151|FNVKDDVRCQ

>sp|Y557_PICTO|PUTATIVE HTH-type transcriptional regulatory protein|Picrophilus torridus

Query: 1 FNVKDDVR 8
+N+KDD++
Sbjct: 195 YNIKDDIK 202


>sp|SFSA_THEAC|SUGAR fermentation stimulation protein homolog|Thermoplasma acidophilum

Query: 4 KDDVRC 9
+DDVRC
Sbjct: 160 RDDVRC 165


>sp|HELS_THEAC|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FNVKDD 6
FN+KDD
Sbjct: 513 FNIKDD 518


>sp|FTHS_THEAC|FORMATE--TETRAHYDROFOLATE ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FNVKDDVRCQ 10
+++KDD+R +
Sbjct: 419 YDLKDDIRTK 428


>sp|GLYA_METS3|SERINE hydroxymethyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 2 NVKDDVR 8
N+KD+VR
Sbjct: 392 NIKDEVR 398


>sp|METK_THEAC|S-ADENOSYLMETHIONINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FNVKDDVR 8
FN+KD+++
Sbjct: 225 FNIKDELK 232




32|SequenceR|165|156|FLIFHFNVKD

>sp|IDI2_PICTO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Picrophilus torridus (strain ATCC 700027

Query: 1 FLIFHFN 7
FLI HFN
Sbjct: 150 FLIVHFN 156


>sp|RQCH_METJA|ARCHAEAL Rqc2 homolog aRqcH|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LIFHFNVKD 10
+IFHF +D
Sbjct: 104 VIFHFETRD 112


>sp|COBY_METJA|ADENOSYLCOBINAMIDE-PHOSPHATE guanylyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LIFHFNVKD 10
LIF+ N KD
Sbjct: 174 LIFNINTKD 182


>sp|GCSPB_HALSA|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 1 FLIFHFNV 8
F I HFNV
Sbjct: 261 FDIMHFNV 268


>sp|Y762_METJA|UNCHARACTERIZED transporter MJ0762|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FLIFHFNV 8
FL+F+FN+
Sbjct: 41 FLLFYFNI 48




33|SequenceR|170|161|GDVNNFLIFH

>sp|Y993_METJA|PUTATIVE hydrogenase expression/formation protein MJ0993|Methanocaldococcus

Query: 2 DVNNFLIFH 10
DVNNF I +
Sbjct: 156 DVNNFFILN 164


>sp|TDH_THEON|L-THREONINE 3-dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 2 DVNNFLIF 9
D+NN +IF
Sbjct: 276 DINNLVIF 283


>sp|HISX_ARCFU|HISTIDINOL dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GDVNNFLIF 9
GD +NF +F
Sbjct: 274 GDFSNFAVF 282


>sp|PYLS_METBF|PYRROLYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 DVNNFL 7
D+NNFL
Sbjct: 78 DINNFL 83


>sp|PYLS_METBA|PYRROLYSINE--TRNA ligase|Methanosarcina barkeri

Query: 2 DVNNFL 7
D+NNFL
Sbjct: 78 DINNFL 83


>sp|PYLS_METAC|PYRROLYSINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DVNNFL 7
D+NNFL
Sbjct: 78 DINNFL 83


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 GDVNNFLIFH 10
G V++FLIF+
Sbjct: 691 GVVSSFLIFY 700


>sp|SMC_THEAC|CHROMOSOME partition protein Smc|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GDVNNFLIF 9
GD+N+F+ +
Sbjct: 137 GDINDFISY 145


>sp|UPPS_SULAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (GGDP specific)|Sulfolobus acidocaldarius (strain ATCC

Query: 3 VNNFLIFH 10
++NFL++H
Sbjct: 218 ISNFLLWH 225


>sp|UPPS_SACS2|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Saccharolobus

Query: 3 VNNFLIFH 10
++NFL++H
Sbjct: 218 ISNFLLWH 225


>sp|HTPX1_SULAC|PROTEASE HtpX homolog 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GDVNNFLIF 9
G V NFL+F
Sbjct: 157 GYVGNFLLF 165


>sp|Y037_METJA|UNCHARACTERIZED protein MJ0037|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DVNNFLIFH 10
++ N+LIFH
Sbjct: 124 ELGNYLIFH 132


>sp|UPPS_SULTO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Sulfurisphaera

Query: 3 VNNFLIFH 10
++NFL++H
Sbjct: 218 ISNFLLWH 225


>sp|YPV2_METTF|UNCHARACTERIZED protein ORF2|Methanothermobacter thermautotrophicus

Query: 1 GDVNNFL 7
GD+NN L
Sbjct: 39 GDINNIL 45




34|SequenceR|175|166|LEYLHGDVNN

>sp|TRUB_KORCO|PROBABLE tRNA pseudouridine synthase B|Korarchaeum cryptofilum (strain OPF8)

Query: 3 YLHGDV 8
YLHGDV
Sbjct: 104 YLHGDV 109


>sp|COBQ_METAR|PROBABLE cobyric acid synthase|Methanocella arvoryzae (strain DSM 22066

Query: 3 YLHGDVNN 10
YLHG NN
Sbjct: 425 YLHGIFNN 432


>sp|PCNA_METTH|DNA polymerase sliding clamp|Methanothermobacter thermautotrophicus

Query: 1 LEYLHGD 7
+EYLHG+
Sbjct: 175 IEYLHGE 181


>sp|G1PDH_METKA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanopyrus kandleri (strain AV19 /

Query: 1 LEYLHG 6
+EYLHG
Sbjct: 280 MEYLHG 285


>sp|PCNA_METST|DNA polymerase sliding clamp|Methanosphaera stadtmanae (strain ATCC

Query: 1 LEYLHGDVNN 10
+EYLHG+ N
Sbjct: 175 IEYLHGEKIN 184


>sp|TRUB_THEKO|PROBABLE tRNA pseudouridine synthase B|Thermococcus kodakarensis (strain

Query: 1 LEYLHGDV 8
L +LHGDV
Sbjct: 113 LMHLHGDV 120


>sp|TRUB_PYRHO|PROBABLE tRNA pseudouridine synthase B|Pyrococcus horikoshii (strain ATCC

Query: 1 LEYLHGDV 8
L +LHGDV
Sbjct: 113 LMHLHGDV 120


>sp|TRUB_PYRFU|PROBABLE tRNA pseudouridine synthase B|Pyrococcus furiosus (strain ATCC

Query: 1 LEYLHGDV 8
L +LHGDV
Sbjct: 113 LMHLHGDV 120


>sp|TRUB_PYRAB|PROBABLE tRNA pseudouridine synthase B|Pyrococcus abyssi (strain GE5 /

Query: 1 LEYLHGDV 8
L +LHGDV
Sbjct: 113 LMHLHGDV 120


>sp|DPH2_PYRHO|2-(3-AMINO-3-CARBOXYPROPYL)HISTIDINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 YLHGDVN 9
+LHG++N
Sbjct: 49 FLHGEIN 55


>sp|TRUB_METKA|PROBABLE tRNA pseudouridine synthase B|Methanopyrus kandleri (strain AV19 /

Query: 3 YLHGDVN 9
+LHGDV+
Sbjct: 113 HLHGDVD 119


>sp|ILVD_PICTO|DIHYDROXY-ACID dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 3 YLHGDV 8
+LHGDV
Sbjct: 332 FLHGDV 337


>sp|NEP1_PYRAR|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum arsenaticum (strain

Query: 3 YLHGDVNN 10
+ HGD NN
Sbjct: 176 FPHGDFNN 183


>sp|DP2S_METJA|DNA polymerase II small subunit|Methanocaldococcus jannaschii (strain

Query: 1 LEYLHGDVNN 10
+ +L+GDV+N
Sbjct: 347 IRFLNGDVDN 356


>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 LEYLHGDV 8
LEY+ GDV
Sbjct: 733 LEYVAGDV 740


>sp|TRUB_THEGJ|PROBABLE tRNA pseudouridine synthase B|Thermococcus gammatolerans (strain

Query: 1 LEYLHGDV 8
L +LHGD+
Sbjct: 113 LMHLHGDI 120


>sp|YIH50_HALSA|UNCHARACTERIZED protein in transposable element|Halobacterium salinarum (strain

Query: 2 EYLHGDVN 9
EY++GDV+
Sbjct: 231 EYVNGDVH 238


>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LEYLHGDV 8
LEY+ GDV
Sbjct: 736 LEYVAGDV 743


>sp|Y2310_ARCFU|MEMO1 family protein AF_2310|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LEYLHGD 7
L+YLH D
Sbjct: 127 LQYLHDD 133


>sp|HIS8_HALMA|HISTIDINOL-PHOSPHATE aminotransferase|Haloarcula marismortui (strain ATCC 43049

Query: 3 YLHGDVN 9
Y HG+VN
Sbjct: 125 YHHGEVN 131


>sp|MUTS1_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 EYLHGDV 8
EYLH +V
Sbjct: 713 EYLHNEV 719


>sp|MUTS1_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 EYLHGDV 8
EYLH +V
Sbjct: 713 EYLHNEV 719


>sp|YPV2_METTF|UNCHARACTERIZED protein ORF2|Methanothermobacter thermautotrophicus

Query: 4 LHGDVNN 10
L GD+NN
Sbjct: 37 LEGDINN 43


>sp|T1R1_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 EYLHGDVNN 10
EYL GD N
Sbjct: 195 EYLSGDSKN 203


>sp|RIO1_ARCFU|RIO-TYPE serine/threonine-protein kinase Rio1|Archaeoglobus fulgidus

Query: 2 EYLHGD 7
EYL+GD
Sbjct: 94 EYLYGD 99


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YLHGDV 8
YLHGD
Sbjct: 1114 YLHGDT 1119


>sp|RS6E_NATPD|SMALL ribosomal subunit protein eS6|Natronomonas pharaonis (strain ATCC

Query: 4 LHGDVN 9
+HGD+N
Sbjct: 62 MHGDIN 67


>sp|RIO2_METJA|RIO-TYPE serine/threonine-protein kinase Rio2|Methanocaldococcus jannaschii

Query: 3 YLHGDVN 9
Y+HGD++
Sbjct: 198 YIHGDLS 204




35|SequenceR|180|171|PMRGDLEYLH

>sp|CETZ_PYRFU|TUBULIN-LIKE protein CetZ|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RGDLEYL 9
RGDLEYL
Sbjct: 33 RGDLEYL 39


>sp|CETZ_THEKO|TUBULIN-LIKE protein CetZ|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 RGDLEYL 9
RGDLEYL
Sbjct: 33 RGDLEYL 39


>sp|CETZ_PYRAB|TUBULIN-LIKE protein CetZ|Pyrococcus abyssi (strain GE5 /

Query: 3 RGDLEYL 9
RGDLEYL
Sbjct: 33 RGDLEYL 39


>sp|TRUA_PYRIL|TRNA pseudouridine synthase A|Pyrobaculum islandicum (strain DSM 4184

Query: 2 MRGDLEYLH 10
+RGDL Y+H
Sbjct: 145 LRGDLIYMH 153


>sp|CFBD_METAC|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina acetivorans

Query: 1 PMRGDLEY 8
P RGDL+Y
Sbjct: 177 PSRGDLKY 184


>sp|PCNA3_AERPE|DNA polymerase sliding clamp 3|Aeropyrum pernix (strain ATCC 700893

Query: 1 PMRGDLEYL 9
P+R D+EYL
Sbjct: 227 PVRVDMEYL 235


>sp|Y1986_ARCFU|UNCHARACTERIZED protein AF_1986|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 MRGDLEYL 9
MRG LEY
Sbjct: 106 MRGKLEYF 113


>sp|HOSA_SACI7|HOMOCITRATE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 PMRGDLEYLH 10
P+ GD +LH
Sbjct: 278 PITGDYAFLH 287


>sp|HOSA_SACI6|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PMRGDLEYLH 10
P+ GD +LH
Sbjct: 278 PITGDYAFLH 287


>sp|HOSA_SACI4|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PMRGDLEYLH 10
P+ GD +LH
Sbjct: 278 PITGDYAFLH 287


>sp|HOSA_SACI3|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 PMRGDLEYLH 10
P+ GD +LH
Sbjct: 278 PITGDYAFLH 287


>sp|HOSA_SACI2|HOMOCITRATE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PMRGDLEYLH 10
P+ GD +LH
Sbjct: 278 PITGDYAFLH 287


>sp|HOSA_SACI1|HOMOCITRATE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 PMRGDLEYLH 10
P+ GD +LH
Sbjct: 278 PITGDYAFLH 287


>sp|Y772_ARCFU|UNCHARACTERIZED protein AF_0772|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 MRGDLE 7
MRGDLE
Sbjct: 204 MRGDLE 209


>sp|HOSA_SACS2|HOMOCITRATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PMRGDLEYLH 10
P+ GD +LH
Sbjct: 278 PITGDYAFLH 287


>sp|FRHG_METJA|COENZYME F420 hydrogenase subunit gamma|Methanocaldococcus jannaschii

Query: 2 MRGDLEYLH 10
+ GD+EYL
Sbjct: 143 LNGDMEYLQ 151


>sp|FRHG_METVO|COENZYME F420 hydrogenase subunit gamma|Methanococcus voltae

Query: 2 MRGDLEYL 9
+ GD+EYL
Sbjct: 156 LEGDMEYL 163


>sp|TRUA_PYRNV|TRNA pseudouridine synthase A|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 RGDLEYLH 10
RGDL +LH
Sbjct: 146 RGDLVFLH 153


>sp|RL30E_PYRNV|LARGE ribosomal subunit protein eL30|Pyrobaculum neutrophilum (strain

Query: 3 RGDLEY 8
RGD+EY
Sbjct: 47 RGDIEY 52


>sp|RS6E_METAR|SMALL ribosomal subunit protein eS6|Methanocella arvoryzae (strain DSM

Query: 1 PMRGDL 6
PMRGD+
Sbjct: 62 PMRGDI 67


>sp|GATD_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 1 PMRGDLEY 8
PM G++EY
Sbjct: 85 PMEGEIEY 92


>sp|RAD50_PYRAB|DNA double-strand break repair Rad50|Pyrococcus abyssi (strain GE5 /

Query: 1 PMRGDLE 7
P+RG+LE
Sbjct: 222 PIRGELE 228


>sp|CFBD_METBF|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina barkeri

Query: 1 PMRGDLEY 8
P RGD++Y
Sbjct: 177 PSRGDVKY 184


>sp|HOSA_SULTO|HOMOCITRATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PMRGDLEYLH 10
P+ GD ++H
Sbjct: 277 PITGDYAFIH 286


>sp|TRPC_PYRNV|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 MRGDLEYL 9
+RGD++Y+
Sbjct: 193 LRGDVDYI 200


>sp|TRPC_PYRAE|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 MRGDLEYL 9
+RGD+E++
Sbjct: 193 LRGDVEFI 200


>sp|END4_HALSA|PROBABLE endonuclease 4|Halobacterium salinarum (strain ATCC 700922

Query: 4 GDLEYLH 10
GD E+LH
Sbjct: 151 GDFEHLH 157


>sp|END4_HALS3|PROBABLE endonuclease 4|Halobacterium salinarum (strain ATCC 29341

Query: 4 GDLEYLH 10
GD E+LH
Sbjct: 151 GDFEHLH 157


>sp|DNLJ_HALWD|DNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 GDLEYL 9
GDLEY+
Sbjct: 183 GDLEYI 188


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RGDLEYL 9
RG+L+YL
Sbjct: 1034 RGELDYL 1040


>sp|MEND_HALSA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 4 GDLEYLH 10
GDL Y H
Sbjct: 465 GDLAYFH 471


>sp|MEND_HALS3|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 4 GDLEYLH 10
GDL Y H
Sbjct: 465 GDLAYFH 471


>sp|PYRB_THEPD|ASPARTATE carbamoyltransferase catalytic subunit|Thermofilum pendens

Query: 3 RGDLEYL 9
R DLEYL
Sbjct: 25 RSDLEYL 31


>sp|ENDA_ARCFU|TRNA-SPLICING endonuclease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RGDLEYLH 10
RGD YLH
Sbjct: 24 RGDKIYLH 31




36|SequenceR|185|176|HNVPFPMRGD

>sp|RS5_CENSY|SMALL ribosomal subunit protein uS5|Cenarchaeum symbiosum (strain A)

Query: 1 HNVPFPMRG 9
H+VPF +RG
Sbjct: 146 HSVPFKVRG 154


>sp|RS5_IGNH4|SMALL ribosomal subunit protein uS5|Ignicoccus hospitalis (strain KIN4/I

Query: 1 HNVPFPMRG 9
H+VPF +RG
Sbjct: 129 HSVPFTVRG 137


>sp|RS5_HYPBU|SMALL ribosomal subunit protein uS5|Hyperthermus butylicus (strain DSM

Query: 1 HNVPFPMRG 9
H+VPF +RG
Sbjct: 132 HSVPFTVRG 140


>sp|RS5_AERPE|SMALL ribosomal subunit protein uS5|Aeropyrum pernix (strain ATCC 700893

Query: 1 HNVPFPMRG 9
H+VPF +RG
Sbjct: 133 HSVPFTVRG 141


>sp|RS5_PYRIL|SMALL ribosomal subunit protein uS5|Pyrobaculum islandicum (strain DSM

Query: 1 HNVPFPMRG 9
H+VPF +RG
Sbjct: 128 HSVPFVVRG 136


>sp|RS5_PYRAE|SMALL ribosomal subunit protein uS5|Pyrobaculum aerophilum (strain ATCC

Query: 1 HNVPFPMRG 9
H+VPF +RG
Sbjct: 144 HSVPFVVRG 152


>sp|TIAS_CALMQ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Caldivirga maquilingensis

Query: 2 NVPFPMRGD 10
NVPF RG+
Sbjct: 50 NVPFKTRGN 58


>sp|RS5_PYRAR|SMALL ribosomal subunit protein uS5|Pyrobaculum arsenaticum (strain DSM

Query: 1 HNVPFPMRG 9
H+VPF ++G
Sbjct: 128 HSVPFVVKG 136


>sp|TDXH1_THEAC|PEROXIREDOXIN 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 VPFPMRGD 10
VPFP+ GD
Sbjct: 97 VPFPIIGD 104


>sp|RS5_METS3|SMALL ribosomal subunit protein uS5|Methanobrevibacter smithii (strain

Query: 1 HNVPFPMRG 9
H VPF ++G
Sbjct: 127 HTVPFKVQG 135


>sp|SYS2_METBU|TYPE-2 serine--tRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 HNVPFPMRGD 10
+ P P RGD
Sbjct: 417 YEAPLPYRGD 426


>sp|RS5_PYRHO|SMALL ribosomal subunit protein uS5|Pyrococcus horikoshii (strain ATCC

Query: 1 HNVPFPMRG 9
H+VPF + G
Sbjct: 139 HSVPFAVEG 147


>sp|RS5_PYRFU|SMALL ribosomal subunit protein uS5|Pyrococcus furiosus (strain ATCC

Query: 1 HNVPFPMRG 9
H+VPF + G
Sbjct: 139 HSVPFAVEG 147


>sp|TIAS_PYRNV|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrobaculum neutrophilum

Query: 2 NVPFPMRGD 10
NVPF RG+
Sbjct: 50 NVPFKTRGN 58


>sp|RS5_PYRAB|SMALL ribosomal subunit protein uS5|Pyrococcus abyssi (strain GE5 /

Query: 1 HNVPFPMRG 9
H+VPF + G
Sbjct: 139 HSVPFTVEG 147


>sp|RS5_METST|SMALL ribosomal subunit protein uS5|Methanosphaera stadtmanae (strain

Query: 1 HNVPFPMRG 9
H VPF + G
Sbjct: 141 HTVPFKIEG 149


>sp|DPHB_METMJ|DIPHTHINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 NVPFPMRG 9
+VPFP +G
Sbjct: 134 SVPFPAKG 141


>sp|RS5_STAMF|SMALL ribosomal subunit protein uS5|Staphylothermus marinus (strain ATCC

Query: 1 HNVPFPMRG 9
H++PF ++G
Sbjct: 133 HSIPFTVQG 141


>sp|RS5_METM5|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain C5

Query: 1 HNVPFPMRG 9
H++PF +G
Sbjct: 139 HSIPFAAKG 147


>sp|RS5_META3|SMALL ribosomal subunit protein uS5|Methanococcus aeolicus (strain ATCC

Query: 1 HNVPFPMRG 9
H++PF +G
Sbjct: 132 HSIPFAAKG 140


>sp|RS5_METVS|SMALL ribosomal subunit protein uS5|Methanococcus vannielii (strain ATCC

Query: 1 HNVPFPMRG 9
H++PF +G
Sbjct: 135 HSIPFTAKG 143


>sp|RS5_METVA|SMALL ribosomal subunit protein uS5|Methanococcus vannielii

Query: 1 HNVPFPMRG 9
H++PF +G
Sbjct: 135 HSIPFTAKG 143


>sp|RS5_METMP|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain DSM

Query: 1 HNVPFPMRG 9
H++PF +G
Sbjct: 135 HSIPFTAKG 143


>sp|RS5_METM7|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain C7

Query: 1 HNVPFPMRG 9
H++PF +G
Sbjct: 139 HSIPFTAKG 147


>sp|RS5_METM6|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain C6

Query: 1 HNVPFPMRG 9
H++PF +G
Sbjct: 139 HSIPFTAKG 147


>sp|TIAS_METKA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanopyrus kandleri (strain

Query: 2 NVPFPMRGD 10
NVPF RG+
Sbjct: 47 NVPFKTRGN 55


>sp|RPO11_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo11|Archaeoglobus fulgidus (strain ATCC

Query: 1 HNVPFPMRGD 10
+N+P P+ G+
Sbjct: 43 YNIPHPLIGE 52


>sp|HTPX2_SULTO|PROTEASE HtpX homolog 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 NVPFP 6
NVPFP
Sbjct: 107 NVPFP 111


>sp|Y754_METJA|UNCHARACTERIZED protein MJ0754|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HNVPFPMRGD 10
+N+P P++ D
Sbjct: 68 YNIPDPVKND 77


>sp|RS5_THEPD|SMALL ribosomal subunit protein uS5|Thermofilum pendens (strain DSM 2475

Query: 1 HNVPFPMRG 9
H++PF + G
Sbjct: 124 HSIPFKVEG 132


>sp|RS5_THEKO|SMALL ribosomal subunit protein uS5|Thermococcus kodakarensis (strain

Query: 1 HNVPFPMRG 9
H++PF + G
Sbjct: 138 HSIPFAVEG 146


>sp|RS5_METTH|SMALL ribosomal subunit protein uS5|Methanothermobacter

Query: 1 HNVPFPMRG 9
H VPF + G
Sbjct: 129 HTVPFKVSG 137


>sp|TIAS_THESM|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus sibiricus

Query: 2 NVPFPMRGD 10
NVP+ RG+
Sbjct: 48 NVPYKTRGN 56


>sp|HMGCS_PYRIL|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 PFPMRGD 10
P+PM G+
Sbjct: 194 PYPMHGE 200


>sp|HMGCS_PYRAE|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PFPMRGD 10
P+PM G+
Sbjct: 194 PYPMHGE 200


>sp|HMGCS_PYRNV|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 PFPMRGD 10
P+PM G+
Sbjct: 194 PYPMHGE 200


>sp|HMGCS_PYRAR|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 PFPMRGD 10
P+PM G+
Sbjct: 193 PYPMHGE 199


>sp|RS5_METKA|SMALL ribosomal subunit protein uS5|Methanopyrus kandleri (strain AV19 /

Query: 1 HNVPFPMRG 9
H++PF + G
Sbjct: 129 HSIPFEITG 137


>sp|HMGCS_PYRCJ|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 PFPMRGD 10
P+PM G+
Sbjct: 194 PYPMHGE 200


>sp|RS5_PYRCJ|SMALL ribosomal subunit protein uS5|Pyrobaculum calidifontis (strain DSM

Query: 1 HNVPFPMRG 9
H+VPF + G
Sbjct: 128 HSVPFVVSG 136


>sp|COFC_METKA|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 3 VPFPMRGD 10
VPF RGD
Sbjct: 5 VPFADRGD 12


>sp|RNZ_HALSA|RIBONUCLEASE Z|Halobacterium salinarum (strain ATCC 700922

Query: 1 HNVPFP 6
H +PFP
Sbjct: 300 HEIPFP 305


>sp|RNZ_HALS3|RIBONUCLEASE Z|Halobacterium salinarum (strain ATCC 29341

Query: 1 HNVPFP 6
H +PFP
Sbjct: 300 HEIPFP 305




37|SequenceR|190|181|ESSAGHNVPF

>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 SSAGHNVP 9
SS GHNVP
Sbjct: 456 SSGGHNVP 463


>sp|DHPSL_METJA|7,8-DIHYDROPTERIN-6-METHYL-4-(BETA-D-RIBOFURANOSYL)-AMINOBENZENE-5'-PHOSPHATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ESSAGHNVPF 10
E AG+N PF
Sbjct: 18 EDYAGYNSPF 27


>sp|GGGPS_NATPD|GERANYLGERANYLGLYCERYL phosphate synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ESSAGHNVP 9
E++A H++P
Sbjct: 55 EATAAHDIP 63


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 HNVPF 10
HN+PF
Sbjct: 84 HNIPF 88


>sp|PYRG_SACS2|CTP synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 6 HNVPF 10
HN+PF
Sbjct: 378 HNIPF 382


>sp|MTNA_ARCFU|PUTATIVE methylthioribose-1-phosphate isomerase|Archaeoglobus fulgidus

Query: 6 HNVPF 10
HN+PF
Sbjct: 255 HNIPF 259


>sp|MRE11_SULAC|DNA double-strand break repair protein|Sulfolobus acidocaldarius

Query: 6 HNVPF 10
HN+PF
Sbjct: 74 HNIPF 78


>sp|AMT2_METJA|AMMONIUM transporter Amt2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 GHNVP 9
GHN+P
Sbjct: 217 GHNIP 221


>sp|AMT1_METJA|AMMONIUM transporter Amt1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 GHNVP 9
GHN+P
Sbjct: 189 GHNIP 193


>sp|PYRG_METPE|CTP synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 6 HNVPF 10
HN+PF
Sbjct: 367 HNIPF 371


>sp|PYRG_HALWD|CTP synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 6 HNVPF 10
HNVPF
Sbjct: 383 HNVPF 387




38|SequenceR|195|186|KLLTDESSAG

***** No hits found ******


39|SequenceR|200|191|VKAADKLLTD

***** No hits found ******


40|SequenceR|205|196|TFERCVKAAD

>sp|HIS8_METJA|HISTIDINOL-PHOSPHATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FERCVK 7
FERCV+
Sbjct: 280 FERCVR 285


>sp|KAE1_PYRIL|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum islandicum

Query: 3 ERCVKAAD 10
E+C +AAD
Sbjct: 178 EKCAEAAD 185


>sp|APE1_SACS2|PROBABLE aminopeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 FERCVKAAD 10
FER +KA D
Sbjct: 681 FERNIKAQD 689


>sp|HDRA_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 1 TFERCVKAA 9
TF RCV+ A
Sbjct: 88 TFRRCVEEA 96


>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 1 TFERCVKAA 9
TF RCV+ A
Sbjct: 87 TFRRCVEEA 95


>sp|HDRA2_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus

Query: 1 TFERCVKAA 9
TF RCV+ A
Sbjct: 81 TFRRCVEEA 89


>sp|CCA_METMA|CCA-ADDING enzyme|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TFERCVKAA 9
+FE+ VKAA
Sbjct: 199 SFEKTVKAA 207


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus

Query: 1 TFERCVKAA 9
TF CVK A
Sbjct: 82 TFRNCVKEA 90




41|SequenceR|210|201|GQERETFERC

>sp|IF2P_META3|PROBABLE translation initiation factor IF-2|Methanococcus aeolicus (strain

Query: 1 GQERETFER 9
G ERE FER
Sbjct: 574 GDEREAFER 582


>sp|HIS8_METJA|HISTIDINOL-PHOSPHATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QERETFERC 10
++RE FERC
Sbjct: 275 RDREFFERC 283


>sp|COFC_ARCPA|2-PHOSPHO-L-LACTATE guanylyltransferase|Archaeoglobus profundus (strain DSM 5631

Query: 3 ERETFERC 10
ERE F RC
Sbjct: 24 ERENFARC 31


>sp|PDXT_SULTO|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Sulfurisphaera tokodaii (strain

Query: 1 GQERETFE 8
G++RE+FE
Sbjct: 120 GRQRESFE 127


>sp|PDXT_SULAC|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Sulfolobus acidocaldarius

Query: 1 GQERETFE 8
G++RE+FE
Sbjct: 120 GRQRESFE 127


>sp|PDXT_STAMF|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Staphylothermus marinus (strain

Query: 1 GQERETFE 8
G++RE+FE
Sbjct: 120 GRQRESFE 127


>sp|PDXT_SACI7|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus (strain

Query: 1 GQERETFE 8
G++RE+FE
Sbjct: 120 GRQRESFE 127


>sp|PDXT_SACI6|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus (strain

Query: 1 GQERETFE 8
G++RE+FE
Sbjct: 120 GRQRESFE 127


>sp|PDXT_SACI4|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus (strain

Query: 1 GQERETFE 8
G++RE+FE
Sbjct: 120 GRQRESFE 127


>sp|PDXT_SACI3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus (strain

Query: 1 GQERETFE 8
G++RE+FE
Sbjct: 120 GRQRESFE 127


>sp|PDXT_SACI2|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus (strain

Query: 1 GQERETFE 8
G++RE+FE
Sbjct: 120 GRQRESFE 127


>sp|PDXT_SACI1|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus (strain

Query: 1 GQERETFE 8
G++RE+FE
Sbjct: 120 GRQRESFE 127


>sp|PDXT_PYRIL|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrobaculum islandicum (strain

Query: 1 GQERETFE 8
G++RE+FE
Sbjct: 120 GRQRESFE 127


>sp|PDXT_PYRAE|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrobaculum aerophilum (strain

Query: 1 GQERETFE 8
G++RE+FE
Sbjct: 120 GRQRESFE 127


>sp|PDXT_NITMS|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Nitrosopumilus maritimus (strain

Query: 1 GQERETFE 8
G++RE+FE
Sbjct: 122 GRQRESFE 129


>sp|PDXT_METPE|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosphaerula palustris

Query: 1 GQERETFE 8
G++RE+FE
Sbjct: 115 GRQRESFE 122


>sp|PDXT_METHJ|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanospirillum hungatei JF-1

Query: 1 GQERETFE 8
G++RE+FE
Sbjct: 117 GRQRESFE 124


>sp|PDXT_CALMQ|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Caldivirga maquilingensis

Query: 1 GQERETFE 8
G++RE+FE
Sbjct: 120 GRQRESFE 127


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 2 QERETFE 8
ERETFE
Sbjct: 769 HERETFE 775


>sp|PDXT_KORCO|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Korarchaeum cryptofilum (strain

Query: 1 GQERETFE 8
G++RE+FE
Sbjct: 119 GRQRESFE 126


>sp|PDXT_METB6|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanoregula boonei (strain DSM

Query: 1 GQERETFE 8
G++RE+FE
Sbjct: 114 GRQRESFE 121


>sp|GCH3_AERPE|GTP cyclohydrolase III|Aeropyrum pernix (strain ATCC 700893

Query: 2 QERETFERC 10
+ER +ERC
Sbjct: 114 EERLIYERC 122


>sp|PDXT_METS5|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Metallosphaera sedula (strain

Query: 1 GQERETFE 8
G++RE+FE
Sbjct: 118 GRQRESFE 125


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 1 GQERETFER 9
G++R+TFE+
Sbjct: 431 GEDRKTFEK 439


>sp|PTH_HALSA|PEPTIDYL-TRNA hydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GQERETFER 9
G ERE +ER
Sbjct: 54 GSERELYER 62


>sp|PTH_HALS3|PEPTIDYL-TRNA hydrolase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GQERETFER 9
G ERE +ER
Sbjct: 54 GSERELYER 62


>sp|CBIA_METVS|COBYRINATE a,c-diamide synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GQERETFE 8
G+E+ETF+
Sbjct: 377 GKEKETFK 384


>sp|PDXT_PYRNV|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrobaculum neutrophilum (strain

Query: 1 GQERETFE 8
G++RE+FE
Sbjct: 120 GRQRESFE 127


>sp|PANB_PYRFU|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 QERETFER 9
Q++ETF R
Sbjct: 265 QDKETFNR 272


>sp|PDXT_AERPE|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Aeropyrum pernix (strain ATCC

Query: 1 GQERETFE 8
G++RE+FE
Sbjct: 120 GRQRESFE 127


>sp|PDXT_IGNH4|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Ignicoccus hospitalis (strain

Query: 1 GQERETFE 8
G++RE+FE
Sbjct: 120 GRQRESFE 127


>sp|DNLI_METKA|DNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 GQERETFER 9
G+ RETFE+
Sbjct: 115 GEVRETFEK 123


>sp|PDXT_METKA|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanopyrus kandleri (strain

Query: 1 GQERETFE 8
G++RE+FE
Sbjct: 124 GRQRESFE 131


>sp|Y539_THEKO|PUTATIVE HTH-type transcriptional regulatory protein|Thermococcus

Query: 3 ERETFER 9
ERE FER
Sbjct: 206 EREVFER 212


>sp|Y1320_NATPD|PUTATIVE HTH-type transcriptional regulatory protein|Natronomonas pharaonis

Query: 3 ERETFER 9
ERE FER
Sbjct: 294 EREEFER 300


>sp|Y367_PYRAB|PUTATIVE HTH-type transcriptional regulatory protein|Pyrococcus abyssi

Query: 3 ERETFER 9
ERE FER
Sbjct: 207 EREVFER 213




42|SequenceR|215|206|SFRVEGQERE

>sp|LYSY_PYRFU|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 FRVEGQERE 10
FR EG ERE
Sbjct: 230 FRYEGNERE 238


>sp|NSR_THEKO|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Thermococcus kodakarensis

Query: 1 SFRVEGQER 9
+ R+EG+ER
Sbjct: 212 TLRIEGKER 220


>sp|MFND_METFA|TYRAMINE--L-GLUTAMATE ligase|Methanocaldococcus fervens (strain DSM 4213

Query: 1 SFRVEGQE 8
+F+VEG+E
Sbjct: 279 TFKVEGKE 286


>sp|RRP4_THEPD|EXOSOME complex component Rrp4|Thermofilum pendens (strain DSM 2475

Query: 2 FRVEGQ 7
FRVEGQ
Sbjct: 28 FRVEGQ 33


>sp|ASSY_SACS2|ARGININOSUCCINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SFRVEGQERE 10
SFR+ G+E E
Sbjct: 340 SFRIVGRESE 349




43|SequenceR|223|211|AAKCLAVASFRVE

>sp|RPIA_METB6|RIBOSE-5-PHOSPHATE isomerase A|Methanoregula boonei (strain DSM 21154

Query: 3 KCLAVASFR 11
KC+A A+FR
Sbjct: 111 KCVASAAFR 119


>sp|MTTB1_METMA|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 AKCLAVASF 10
AKC AVA F
Sbjct: 2 AKCNAVAGF 10


>sp|SYP_PYRCJ|PROLINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 AAKCLAVASFRV 12
AAK L A FRV
Sbjct: 317 AAKALREAGFRV 328


>sp|Y453_METLZ|UPF0280 protein Mlab_0453|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 AAKCLAVASFRVE 13
+ +C+A ASF +
Sbjct: 63 SVRCMAAASFEAD 75




THE END