UCHL1_HUMAN Blast Output
Archaea
1|Sequence|1|10|MQLKPMEINP

>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MQLKPMEIN 9
Q KP+EIN
Sbjct: 380 FQFKPLEIN 388


>sp|HDRC1_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 1 MQLKPME 7
MQLKP+E
Sbjct: 182 MQLKPVE 188


>sp|CBIA_THEAC|COBYRINATE a,c-diamide synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MQLKPMEINP 10
M++KP +I P
Sbjct: 33 MKVKPYKIGP 42


>sp|Y599_METJA|UNCHARACTERIZED protein MJ0599|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MQLKPMEIN 9
MQ+KP E N
Sbjct: 1 MQIKPFEEN 9


>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 QLKPMEIN 9
Q+KP+E+N
Sbjct: 665 QVKPLEMN 672


Query: 3 LKPMEIN 9
LKP EIN
Sbjct: 803 LKPYEIN 809


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 QLKPMEIN 9
Q+KP+E+N
Sbjct: 665 QVKPLEMN 672


Query: 3 LKPMEIN 9
LKP EIN
Sbjct: 803 LKPYEIN 809


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 QLKPMEIN 9
Q+KP+E+N
Sbjct: 665 QVKPLEMN 672


Query: 3 LKPMEIN 9
LKP EIN
Sbjct: 803 LKPYEIN 809


>sp|COFH2_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina mazei (strain ATCC

Query: 3 LKPMEIN 9
L PME+N
Sbjct: 138 LSPMEVN 144


>sp|COFH2_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina barkeri (strain Fusaro

Query: 3 LKPMEIN 9
L PME+N
Sbjct: 138 LSPMEVN 144


>sp|RL35A_PYRHO|LARGE ribosomal subunit protein eL33|Pyrococcus horikoshii (strain ATCC

Query: 1 MQLKPMEIN 9
M +KP++IN
Sbjct: 22 MIIKPLDIN 30


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 MQLKPMEIN 9
++LKP E+N
Sbjct: 474 VELKPFEVN 482


>sp|TAW22_NANEQ|TRNA (guanine(37)-N(1))/4-demethylwyosine(37)-methyltransferase

Query: 1 MQLKPMEINP 10
+Q+K +E+NP
Sbjct: 122 VQIKSIELNP 131


>sp|COFH2_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina acetivorans (strain

Query: 3 LKPMEIN 9
L PME+N
Sbjct: 138 LSPMEVN 144


>sp|AMPK_PYRFU|LYSYL aminopeptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 QLKPMEINP 10
+LKPM+ P
Sbjct: 338 ELKPMDFTP 346


>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 LKPMEIN 9
LKP EIN
Sbjct: 803 LKPYEIN 809


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 LKPMEIN 9
LKP EIN
Sbjct: 803 LKPYEIN 809


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 LKPMEIN 9
LKP EIN
Sbjct: 803 LKPYEIN 809


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LKPMEIN 9
LKP EIN
Sbjct: 803 LKPYEIN 809




2|Sequence|6|15|MEINPEMLNK

>sp|SRP54_METKA|SIGNAL recognition particle 54 kDa|Methanopyrus kandleri (strain AV19 /

Query: 4 NPEMLNK 10
NPE+LNK
Sbjct: 385 NPEILNK 391


>sp|PYRG_HALWD|CTP synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 EINPEMLNK 10
E+NPE ++K
Sbjct: 474 EVNPEYIDK 482


>sp|TRM4_METJA|TRNA (cytosine(48)-C(5))-methyltransferase|Methanocaldococcus

Query: 1 MEINPEMLNK 10
++INPE+L K
Sbjct: 18 LKINPEVLKK 27


>sp|CPGS_PYRFU|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus furiosus (strain ATCC

Query: 1 MEINPEMLNK 10
MEI PE L K
Sbjct: 169 MEITPEFLLK 178


>sp|CPGS_PYRHO|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus horikoshii (strain

Query: 1 MEINPEML 8
MEI PE L
Sbjct: 173 MEITPEFL 180


>sp|IF2G_METMP|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain DSM

Query: 1 MEINPEMLNK 10
MEI P++L +
Sbjct: 326 MEIEPQLLER 335


>sp|ARGB_METTP|ACETYLGLUTAMATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 EINPEML 8
EINPE+L
Sbjct: 151 EINPEIL 157


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 MEINPEMLNK 10
+ NPEML K
Sbjct: 759 LSTNPEMLVK 768


>sp|RADA_METMA|DNA repair and recombination protein|Methanosarcina mazei (strain ATCC

Query: 1 MEINPE 6
ME+NPE
Sbjct: 164 MELNPE 169


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EINPEMLNK 10
E+NPE +++
Sbjct: 462 EVNPEFVDR 470


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 EINPEMLNK 10
E+NPE +++
Sbjct: 462 EVNPEFVDR 470


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EINPEMLNK 10
E+NPE +++
Sbjct: 462 EVNPEFVDR 470


>sp|PYRG_ARCFU|CTP synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EINPEMLNK 10
E+NPE + K
Sbjct: 459 EVNPEYIEK 467


>sp|DHAS_METTH|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 EINPEMLN 9
E+NPE L+
Sbjct: 119 EVNPEFLD 126


>sp|PYCB_METJA|PYRUVATE carboxylase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 3 INPEMLNK 10
INPE+L +
Sbjct: 379 INPELLKR 386


>sp|SYFB_METHJ|PHENYLALANINE--TRNA ligase beta subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 EINPEMLNK 10
EI+P +LNK
Sbjct: 511 EIHPGVLNK 519


>sp|RNH2_THEVO|RIBONUCLEASE HII|Thermoplasma volcanium (strain ATCC 51530

Query: 3 INPEMLNK 10
++PE LNK
Sbjct: 67 VSPETLNK 74


>sp|Y973_METJA|UNCHARACTERIZED protein MJ0973|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EINPEMLNK 10
E+ PE+ NK
Sbjct: 361 ELYPELFNK 369


>sp|PYRG_THEON|CTP synthase|Thermococcus onnurineus (strain NA1)

Query: 2 EINPEMLNK 10
E+NPE + +
Sbjct: 461 EVNPEFIER 469


>sp|SRP54_PYRNV|SIGNAL recognition particle 54 kDa|Pyrobaculum neutrophilum (strain DSM

Query: 4 NPEMLN 9
NPE+LN
Sbjct: 383 NPELLN 388




3|Sequence|11|20|EMLNKVLSRL

>sp|RFRNP_METJA|RNA-FREE ribonuclease P|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EMLNKVLSR 9
E++NKVLS+
Sbjct: 145 EIINKVLSK 153


>sp|GUAAB_METAR|GMP synthase [glutamine-hydrolyzing] subunit B|Methanocella arvoryzae

Query: 1 EMLNKVLSRL 10
E LNK+ SR+
Sbjct: 271 ETLNKISSRI 280


>sp|PFDB_PYRIL|PREFOLDIN subunit beta|Pyrobaculum islandicum (strain DSM 4184

Query: 1 EMLNKVLSRL 10
E +NK LSRL
Sbjct: 105 EEINKELSRL 114


>sp|RFCL_METJA|REPLICATION factor C large subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EMLNKVLSRL 10
E+LNK+L ++
Sbjct: 344 EILNKILKKI 353




4|Sequence|16|25|VLSRLGVAGQ

>sp|MPTA_NATPD|GTP cyclohydrolase MptA|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LSRLGVAG 9
LSR+GV G
Sbjct: 19 LSRVGVTG 26


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VLSRLGVAGQ 10
VLS +GV G+
Sbjct: 270 VLSEVGVKGE 279


>sp|SYH_PICTO|HISTIDINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 VLSRLGVAGQ 10
+L LG++GQ
Sbjct: 145 ILDNLGLSGQ 154


>sp|LIPA_PYRAR|LIPOYL synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VLSRLGV 7
VLSRLGV
Sbjct: 24 VLSRLGV 30




5|Sequence|21|30|GVAGQWRFVD

>sp|TRM56_AERPE|TRNA (cytidine(56)-2'-O)-methyltransferase|Aeropyrum pernix (strain ATCC

Query: 4 GQWRFVD 10
G+WRF+D
Sbjct: 156 GEWRFID 162


>sp|PINA_SACI5|HOLLIDAY junction branch migration ATPase|Saccharolobus islandicus (strain

Query: 1 GVAGQWRFVD 10
G G W+FV+
Sbjct: 151 GKPGNWKFVN 160


>sp|IF2G_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 2 VAGQWRFV 9
V+G+WR V
Sbjct: 404 VSGRWRLV 411


>sp|IF2G_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 VAGQWRFV 9
+AG+WR +
Sbjct: 401 IAGRWRMI 408


>sp|PINA_SULAC|HOLLIDAY junction branch migration ATPase|Sulfolobus acidocaldarius (strain

Query: 1 GVAGQWRFVD 10
G G W+FV+
Sbjct: 153 GKPGSWQFVE 162


>sp|Y1237_ARCFU|UNCHARACTERIZED protein AF_1237|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GQWRFV 9
G+WR+V
Sbjct: 197 GRWRYV 202


>sp|HIS4_METTH|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanothermobacter

Query: 1 GVAGQW 6
GVAG+W
Sbjct: 34 GVAGRW 39


>sp|DSRD_ARCFU|PROTEIN DsrD|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GVAGQW 6
GVAG W
Sbjct: 48 GVAGYW 53


>sp|CYAS_METAR|CYSTEATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 4 GQWRFVD 10
G W+F D
Sbjct: 45 GMWKFYD 51




6|Sequence|26|35|WRFVDVLGLE

>sp|RPO1C_THEGJ|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus gammatolerans (strain DSM

Query: 1 WRFVDVLGLE 10
W DVLG+E
Sbjct: 270 WEIADVLGIE 279


>sp|Y1404_METJA|UNCHARACTERIZED protein MJ1404|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WRFVDVL 7
W F+DVL
Sbjct: 371 WEFIDVL 377


>sp|PCNA_METAR|DNA polymerase sliding clamp|Methanocella arvoryzae (strain DSM 22066

Query: 2 RFVDVLGL 9
RF+D+LG+
Sbjct: 72 RFMDILGM 79


>sp|RPO1C_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus kodakarensis (strain ATCC

Query: 1 WRFVDVLGLE 10
W +VLG+E
Sbjct: 270 WEIAEVLGIE 279


>sp|Y1120_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1120|Methanocaldococcus

Query: 3 FVDVLGLE 10
FVDVLG++
Sbjct: 127 FVDVLGVD 134


>sp|NRPR_METJA|GLOBAL nitrogen regulator NrpR|Methanocaldococcus jannaschii (strain ATCC

Query: 2 RFVDVLGLE 10
RF+D++G +
Sbjct: 426 RFIDIIGYD 434


>sp|APGM_METTP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanothrix thermoacetophila (strain DSM

Query: 1 WRFVDVLG 8
WR +DV G
Sbjct: 250 WRVIDVPG 257


>sp|GLNA_METJA|GLUTAMINE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WRFVDVLGL 9
++FVD+LG
Sbjct: 26 FQFVDILGF 34


>sp|Y1599_METJA|UNCHARACTERIZED protein MJ1599|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WRFVDVLGLE 10
WR +LGL+
Sbjct: 148 WRVTKLLGLK 157


>sp|Y1177_METJA|PUTATIVE transport protein MJ1177|Methanocaldococcus jannaschii (strain

Query: 1 WRFVDVLG 8
W F+DVL
Sbjct: 26 WPFIDVLA 33


>sp|Y1281_METJA|UNCHARACTERIZED protein MJ1281|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WRFVDVLGLE 10
++F+D LGL+
Sbjct: 139 YKFMDELGLD 148


>sp|PYRH_HYPBU|URIDYLATE kinase|Hyperthermus butylicus (strain DSM 5456

Query: 3 FVDVLGLE 10
F D+LG+E
Sbjct: 66 FQDILGIE 73


>sp|SYR_ARCFU|ARGININE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RFVDVLGLE 10
RF++VLG +
Sbjct: 312 RFINVLGAD 320




7|Sequence|31|40|VLGLEEESLG

>sp|RLME_METLZ|RIBOSOMAL RNA large subunit methyltransferase|Methanocorpusculum labreanum

Query: 1 VLGLEEESL 9
V+GL EE+L
Sbjct: 124 VMGLNEEAL 132


>sp|NEP1_THEAC|RIBOSOMAL RNA small subunit methyltransferase|Thermoplasma acidophilum

Query: 1 VLGLEEESLG 10
+L +EE SLG
Sbjct: 131 LLSMEESSLG 140


>sp|NNR_THEPD|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Thermofilum pendens (strain DSM

Query: 2 LGLEEESL 9
LGLEEE+L
Sbjct: 331 LGLEEETL 338


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 VLGLEEESL 9
+LG++EE L
Sbjct: 459 ILGIDEEGL 467




8|Sequence|36|45|EESLGSVPAP

>sp|RS3A_SACS2|SMALL ribosomal subunit protein eS1|Saccharolobus solfataricus (strain

Query: 1 EESLGSVPA 9
E SLGS PA
Sbjct: 28 EVSLGSTPA 36


>sp|RS3A_SACI7|SMALL ribosomal subunit protein eS1|Saccharolobus islandicus (strain

Query: 1 EESLGSVPA 9
E SLGS PA
Sbjct: 28 EVSLGSTPA 36


>sp|RS3A_SACI6|SMALL ribosomal subunit protein eS1|Saccharolobus islandicus (strain

Query: 1 EESLGSVPA 9
E SLGS PA
Sbjct: 28 EVSLGSTPA 36


>sp|RS3A_SACI4|SMALL ribosomal subunit protein eS1|Saccharolobus islandicus (strain

Query: 1 EESLGSVPA 9
E SLGS PA
Sbjct: 28 EVSLGSTPA 36


>sp|RS3A_SACI3|SMALL ribosomal subunit protein eS1|Saccharolobus islandicus (strain

Query: 1 EESLGSVPA 9
E SLGS PA
Sbjct: 28 EVSLGSTPA 36


>sp|RS3A_SACI2|SMALL ribosomal subunit protein eS1|Saccharolobus islandicus (strain

Query: 1 EESLGSVPA 9
E SLGS PA
Sbjct: 28 EVSLGSTPA 36


>sp|RS3A_SACI1|SMALL ribosomal subunit protein eS1|Saccharolobus islandicus (strain

Query: 1 EESLGSVPA 9
E SLGS PA
Sbjct: 28 EVSLGSTPA 36


>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 EESLGSVP 8
EE+LG VP
Sbjct: 270 EENLGDVP 277


>sp|CAPPA_METHJ|PHOSPHOENOLPYRUVATE carboxylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 ESLGSVP 8
E+LGS+P
Sbjct: 102 ETLGSIP 108


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ESLGSVPAP 10
+SLG +P P
Sbjct: 393 KSLGGLPVP 401


>sp|RNP3_METTH|RIBONUCLEASE P protein component 3|Methanothermobacter thermautotrophicus

Query: 1 EESLGSVPA 9
EESL S PA
Sbjct: 214 EESLTSTPA 222


>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain DSM

Query: 1 EESLGSVP 8
+ SLGSVP
Sbjct: 376 KRSLGSVP 383


>sp|TRMY_HALVD|TRNA (pseudouridine(54)-N(1))-methyltransferase|Haloferax volcanii

Query: 1 EESLGSVPA 9
EE++G +PA
Sbjct: 91 EEAIGHMPA 99




9|Sequence|41|50|SVPAPACALL

>sp|CDPAS_METLZ|CDP-ARCHAEOL synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 VPAPACALL 10
+P PA ALL
Sbjct: 6 IPNPAAALL 14




10|Sequence|46|55|ACALLLLFPL

***** No hits found ******


11|Sequence|51|60|LLFPLTAQHE

>sp|RL2_NITMS|LARGE ribosomal subunit protein uL2|Nitrosopumilus maritimus (strain

Query: 3 FPLTAQHE 10
FPL+ QHE
Sbjct: 34 FPLSEQHE 41


>sp|IORB_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorB|Pyrococcus horikoshii (strain ATCC

Query: 3 FPLTAQH 9
FPL+A+H
Sbjct: 162 FPLSAEH 168


>sp|IORB_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorB|Pyrococcus abyssi (strain GE5 /

Query: 3 FPLTAQH 9
FPL+A+H
Sbjct: 162 FPLSAEH 168


>sp|G1PDH_THESM|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus sibiricus (strain DSM 12597

Query: 3 FPLTAQHE 10
FP TA H+
Sbjct: 117 FPTTASHD 124


>sp|G1PDH_THEKO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus kodakarensis (strain ATCC

Query: 3 FPLTAQHE 10
FP TA H+
Sbjct: 118 FPTTASHD 125


>sp|G1PDH_PYRHO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 FPLTAQHE 10
FP TA H+
Sbjct: 113 FPTTASHD 120


>sp|G1PDH_PYRFU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FPLTAQHE 10
FP TA H+
Sbjct: 113 FPTTASHD 120


>sp|G1PDH_PYRAB|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus abyssi (strain GE5 /

Query: 3 FPLTAQHE 10
FP TA H+
Sbjct: 113 FPTTASHD 120




12|Sequence|56|65|TAQHENFRKK

>sp|RLME_METB6|RIBOSOMAL RNA large subunit methyltransferase|Methanoregula boonei (strain

Query: 2 AQHENFRKK 10
A+HE FR +
Sbjct: 14 AKHEGFRSR 22


>sp|GLYA_THEKO|SERINE hydroxymethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 4 HENFRK 9
HEN+RK
Sbjct: 19 HENWRK 24




13|Sequence|61|70|NFRKKQIEEL

>sp|Y1110_METJA|UNCHARACTERIZED protein MJ1110|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NFRKKQIEEL 10
NF+KK IE+L
Sbjct: 432 NFKKKDIEDL 441


>sp|NOP10_THEAC|RIBOSOME biogenesis protein Nop10|Thermoplasma acidophilum (strain ATCC

Query: 2 FRKKQIEEL 10
FRK +IEEL
Sbjct: 41 FRKYRIEEL 49


>sp|RL10_THEKO|LARGE ribosomal subunit protein uL10|Thermococcus kodakarensis (strain

Query: 2 FRKKQIEEL 10
++KK++EEL
Sbjct: 7 WKKKEVEEL 15


>sp|SYP_PYRCJ|PROLINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 NFRKKQIEEL 10
N R++ +EEL
Sbjct: 398 NLRRRAVEEL 407


>sp|RL10_PYRAB|LARGE ribosomal subunit protein uL10|Pyrococcus abyssi (strain GE5 /

Query: 2 FRKKQIEEL 10
++KK++EEL
Sbjct: 7 WKKKEVEEL 15


>sp|RL10_PYRHO|LARGE ribosomal subunit protein uL10|Pyrococcus horikoshii (strain ATCC

Query: 2 FRKKQIEEL 10
++KK++EEL
Sbjct: 7 WKKKEVEEL 15


>sp|TRPA_PYRFU|TRYPTOPHAN synthase alpha chain|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FRKKQIEEL 10
F KK++EEL
Sbjct: 237 FLKKKVEEL 245


>sp|RL10_PYRFU|LARGE ribosomal subunit protein uL10|Pyrococcus furiosus (strain ATCC

Query: 2 FRKKQIEEL 10
++KK++EEL
Sbjct: 7 WKKKEVEEL 15


>sp|RL10_THEGJ|LARGE ribosomal subunit protein uL10|Thermococcus gammatolerans (strain

Query: 2 FRKKQIEEL 10
++KK++EEL
Sbjct: 7 WKKKEVEEL 15


>sp|RL10_THEON|LARGE ribosomal subunit protein uL10|Thermococcus onnurineus (strain

Query: 2 FRKKQIEEL 10
++KK++EEL
Sbjct: 7 WKKKEVEEL 15


>sp|Y1571_METTP|DNA-BINDING protein Mthe_1571|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 NFRKKQIEEL 10
+ R+K++EEL
Sbjct: 7 DLRRKKLEEL 16


>sp|Y1225_ARCFU|UNCHARACTERIZED protein AF_1225|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FRKKQIEEL 10
+K+QIEEL
Sbjct: 144 LQKQQIEEL 152


>sp|RIBL_METMP|FAD synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NFRKKQIEEL 10
NF KK +EL
Sbjct: 24 NFAKKHADEL 33


>sp|AATI_METTH|A-TYPE ATP synthase subunit I|Methanothermobacter thermautotrophicus

Query: 2 FRKKQIEEL 10
F K+++EEL
Sbjct: 103 FEKREVEEL 111




14|Sequence|66|75|QIEELKGQEV

>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 2 IEELKGQE 9
IEEL+G+E
Sbjct: 1391 IEELEGEE 1398


>sp|PIWI_ARCFU|PIWI protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IEELKGQEV 10
+EELK QE+
Sbjct: 272 VEELKKQEM 280


>sp|DNAK_HALMA|CHAPERONE protein DnaK|Haloarcula marismortui (strain ATCC 43049

Query: 1 QIEELKGQE 9
Q+EE+ GQE
Sbjct: 325 QVEEMTGQE 333


>sp|DPHB_THEON|DIPHTHINE synthase|Thermococcus onnurineus (strain NA1)

Query: 1 QIEELKGQEV 10
Q+EE+KG+ V
Sbjct: 187 QVEEMKGEGV 196


>sp|CSG1_HALHT|CELL surface glycoprotein 1|Haloarcula hispanica (strain ATCC 33960

Query: 1 QIEELKGQE 9
Q+E LKG E
Sbjct: 275 QVESLKGNE 283


>sp|DNAK_NATPD|CHAPERONE protein DnaK|Natronomonas pharaonis (strain ATCC 35678

Query: 1 QIEELKGQE 9
++EEL GQE
Sbjct: 326 KVEELTGQE 334


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IEELKGQEV 10
IEE KG+E+
Sbjct: 281 IEEFKGREL 289


>sp|Y674_METJA|UNCHARACTERIZED protein MJ0674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QIEELKGQEV 10
++EE KG E+
Sbjct: 25 EVEEFKGLEL 34


>sp|DNAK_HALSA|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 700922

Query: 1 QIEELKGQE 9
Q+E+L GQE
Sbjct: 325 QVEDLVGQE 333


>sp|DNAK_HALS3|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 29341

Query: 1 QIEELKGQE 9
Q+E+L GQE
Sbjct: 325 QVEDLVGQE 333


>sp|DNAG_HYPBU|DNA primase DnaG|Hyperthermus butylicus (strain DSM 5456

Query: 1 QIEELKGQEV 10
++EEL G+E+
Sbjct: 244 EVEELTGKEI 253


>sp|DNAG_SULTO|DNA primase DnaG|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QIEELKGQEV 10
++EEL G+E+
Sbjct: 246 EVEELTGKEI 255


>sp|DNAG_METS5|DNA primase DnaG|Metallosphaera sedula (strain ATCC 51363

Query: 1 QIEELKGQEV 10
++EEL G+E+
Sbjct: 249 EVEELTGKEI 258


>sp|DNAG_SACS2|DNA primase DnaG|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QIEELKGQEV 10
++EEL G+E+
Sbjct: 250 EVEELTGKEI 259


>sp|DNAG_SACI7|DNA primase DnaG|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 QIEELKGQEV 10
++EEL G+E+
Sbjct: 246 EVEELTGKEI 255


>sp|DNAG_SACI6|DNA primase DnaG|Saccharolobus islandicus (strain M.16.4 /

Query: 1 QIEELKGQEV 10
++EEL G+E+
Sbjct: 246 EVEELTGKEI 255


>sp|DNAG_SACI4|DNA primase DnaG|Saccharolobus islandicus (strain M.14.25 /

Query: 1 QIEELKGQEV 10
++EEL G+E+
Sbjct: 246 EVEELTGKEI 255


>sp|DNAG_SACI3|DNA primase DnaG|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 QIEELKGQEV 10
++EEL G+E+
Sbjct: 246 EVEELTGKEI 255


>sp|DNAG_SACI2|DNA primase DnaG|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 QIEELKGQEV 10
++EEL G+E+
Sbjct: 246 EVEELTGKEI 255


>sp|DNAG_SACI1|DNA primase DnaG|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 QIEELKGQEV 10
++EEL G+E+
Sbjct: 246 EVEELTGKEI 255


>sp|DNAG_SULAC|DNA primase DnaG|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QIEELKGQEV 10
++EEL G+E+
Sbjct: 246 EVEELTGKEI 255


>sp|DNAG_STAMF|DNA primase DnaG|Staphylothermus marinus (strain ATCC 43588

Query: 1 QIEELKGQEV 10
++EEL G+E+
Sbjct: 244 EVEELTGKEI 253




15|Sequence|71|80|KGQEVSPKVY

>sp|THIL_PYRHO|THIAMINE-MONOPHOSPHATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KGQEVSPKV 9
KG+E+ PK+
Sbjct: 167 KGEEIPPKI 175


>sp|OTC_SACS2|ORNITHINE carbamoyltransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KGQEVSPKV 9
+G+EV P+V
Sbjct: 272 RGEEVDPEV 280


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EVSPKVY 10
E+SP+VY
Sbjct: 500 EISPEVY 506


>sp|GLMM_METS3|PROBABLE phosphoglucosamine mutase|Methanobrevibacter smithii (strain ATCC

Query: 2 GQEVSPKVY 10
G E+SP V+
Sbjct: 181 GSEISPLVF 189


>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GQEVSPKVY 10
G E PK+Y
Sbjct: 849 GHEAIPKIY 857


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 2 GQEVSPKVY 10
G E PK+Y
Sbjct: 795 GHEAIPKIY 803


>sp|AATI_PYRAB|A-TYPE ATP synthase subunit I|Pyrococcus abyssi (strain GE5 /

Query: 1 KGQEVSPKVY 10
KG+E++ K Y
Sbjct: 256 KGREIAEKYY 265


>sp|DAPAL_PYRFU|UNCHARACTERIZED DapA-like lyase PF0657|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KGQEVSPKVY 10
KG+E++ K Y
Sbjct: 61 KGRELTSKAY 70


>sp|IF2G_METMP|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain DSM

Query: 1 KGQEVSPKVY 10
+ + VSPK+Y
Sbjct: 204 RDETVSPKLY 213


>sp|RL10_METTH|LARGE ribosomal subunit protein uL10|Methanothermobacter

Query: 2 GQEVSPKV 9
G+E+ PKV
Sbjct: 163 GEEIPPKV 170




16|Sequence|76|85|SPKVYFMKQT

>sp|Y1162_METJA|UNCHARACTERIZED protein MJ1162|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SPKVYFMKQT 10
SPK YF+ T
Sbjct: 196 SPKSYFVYDT 205


>sp|Y945_METJA|UNCHARACTERIZED protein MJ0945|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SPKVYF 6
SPK+YF
Sbjct: 118 SPKIYF 123


>sp|Y1289_METJA|UNCHARACTERIZED protein MJ1289|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PKVYFMKQT 10
P VY++K T
Sbjct: 120 PNVYYIKYT 128




17|Sequence|81|90|FMKQTIGNSC

>sp|RTCB_THEKO|TRNA-SPLICING ligase RtcB|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 MKQTIGNSC 10
M++T G+SC
Sbjct: 396 MRETFGSSC 404


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 MKQTIGNSC 10
MK+T G++C
Sbjct: 785 MKETFGSTC 793


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 2 MKQTIGNSC 10
MK+T G++C
Sbjct: 830 MKETFGSTC 838


>sp|MTRC_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain DSM

Query: 1 FMKQTIGNSC 10
F+K ++G++C
Sbjct: 241 FVKMSLGDAC 250


>sp|IXTPA_METJA|DITP/XTP pyrophosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FMKQTIGN 8
F+++TIGN
Sbjct: 83 FVQETIGN 90


>sp|Y1764_PYRFU|UPF0173 metal-dependent hydrolase PF1764|Pyrococcus furiosus (strain ATCC

Query: 3 KQTIGNSC 10
K +IGN+C
Sbjct: 116 KYSIGNAC 123


>sp|Y1314_THEON|UPF0173 metal-dependent hydrolase TON_1314|Thermococcus onnurineus (strain

Query: 3 KQTIGNSC 10
K +IGN+C
Sbjct: 115 KYSIGNAC 122


>sp|RTCB_ARCFU|TRNA-SPLICING ligase RtcB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 MKQTIGNSC 10
M++T G++C
Sbjct: 396 MEETFGSTC 404




18|Sequence|86|95|IGNSCGTIGL

>sp|Y1764_PYRFU|UPF0173 metal-dependent hydrolase PF1764|Pyrococcus furiosus (strain ATCC

Query: 1 IGNSCGTI 8
IGN+CG I
Sbjct: 119 IGNACGYI 126


>sp|Y1314_THEON|UPF0173 metal-dependent hydrolase TON_1314|Thermococcus onnurineus (strain

Query: 1 IGNSCGTI 8
IGN+CG +
Sbjct: 118 IGNACGYV 125


>sp|Y141_THEKO|UPF0173 metal-dependent hydrolase TK0141|Thermococcus kodakarensis (strain

Query: 1 IGNSCGTI 8
IGN CG I
Sbjct: 118 IGNPCGYI 125


>sp|FAU1_THEGJ|PROBABLE ribonuclease FAU-1|Thermococcus gammatolerans (strain DSM 15229

Query: 1 IGNSCGTI 8
IGN+ GTI
Sbjct: 113 IGNAIGTI 120


>sp|SYFA_METM7|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C7 /

Query: 3 NSCGTIG 9
+ CGTIG
Sbjct: 307 HECGTIG 313


>sp|SYFA_METM5|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C5 /

Query: 3 NSCGTIG 9
+ CGTIG
Sbjct: 307 HECGTIG 313


>sp|KDGK_SULTO|2-DEHYDRO-3-DEOXYGLUCONOKINASE tokodaii (strain DSM 16993

Query: 2 GNSCGTIG 9
GN CG I
Sbjct: 47 GNECGIIA 54


>sp|EF2_METJA|ELONGATION factor 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GNSCGTIGL 10
GN C +GL
Sbjct: 355 GNICALVGL 363


>sp|Y1451_METJA|UNCHARACTERIZED protein MJ1451|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IGNSCGTIG 9
IGN CG G
Sbjct: 253 IGNLCGLAG 261


>sp|RS5_IGNH4|SMALL ribosomal subunit protein uS5|Ignicoccus hospitalis (strain

Query: 1 IGNSCGTIGL 10
IGN G +GL
Sbjct: 79 IGNEDGLVGL 88


>sp|NURA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 3 NSCGTIGL 10
++CG +GL
Sbjct: 317 DNCGVVGL 324


>sp|Y1153_METTH|UNCHARACTERIZED protein MTH_1153|Methanothermobacter thermautotrophicus (strain

Query: 1 IGNSCGTIG 9
+GN CG G
Sbjct: 300 VGNFCGLAG 308


>sp|FAU1_PYRHO|PROBABLE ribonuclease FAU-1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IGNSCGTI 8
IGN+ GT+
Sbjct: 111 IGNAIGTV 118


>sp|FAU1_PYRAB|PROBABLE ribonuclease FAU-1|Pyrococcus abyssi (strain GE5 /

Query: 1 IGNSCGTI 8
IGN+ GT+
Sbjct: 111 IGNAIGTV 118




19|Sequence|91|100|GTIGLIHAVA

>sp|PINA_SULAC|HOLLIDAY junction branch migration ATPase|Sulfolobus acidocaldarius (strain

Query: 1 GTIGLIHAVA 10
G IG++HA +
Sbjct: 344 GMIGVVHATS 353


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GTIGLIH 7
GTIG IH
Sbjct: 877 GTIGYIH 883


>sp|GATB_METMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina mazei (strain ATCC

Query: 2 TIGLIHA 8
TIG IHA
Sbjct: 369 TIGFIHA 375


>sp|GATB_METAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 2 TIGLIHA 8
TIG IHA
Sbjct: 369 TIGFIHA 375


>sp|PGK_HALLT|PHOSPHOGLYCERATE kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 GTIGLIHAVA 10
GT+G++ A+A
Sbjct: 339 GTVGVLEAIA 348




20|Sequence|96|105|IHAVANNQDK

>sp|MPTA_PYRFU|GTP cyclohydrolase MptA|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HAVANNQDK 10
HA+ANNQ K
Sbjct: 159 HAMANNQGK 167


>sp|MPTA_PYRHO|GTP cyclohydrolase MptA|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HAVANNQDK 10
HA+ANN+ K
Sbjct: 161 HAMANNEGK 169


>sp|HIS6_METBU|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcoides burtonii

Query: 4 VANNQDK 10
V NNQDK
Sbjct: 141 VENNQDK 147


>sp|MPTA_THEKO|GTP cyclohydrolase MptA|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 HAVANNQDK 10
HA+ANN K
Sbjct: 159 HAMANNNGK 167


>sp|MPTA_PYRAB|GTP cyclohydrolase MptA|Pyrococcus abyssi (strain GE5 /

Query: 2 HAVANNQDK 10
HA+ANN K
Sbjct: 158 HAMANNNGK 166


>sp|MPTE_PYRFU|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IHAVANNQDK 10
+HA +N DK
Sbjct: 120 VHAHGDNMDK 129


>sp|GYRB_HALVD|DNA gyrase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 1 IHAVANN 7
IHA ANN
Sbjct: 270 IHAFANN 276


>sp|GYRB_HALL2|DNA gyrase subunit B|Haloferax lucentense (strain DSM 14919

Query: 1 IHAVANN 7
IHA ANN
Sbjct: 270 IHAFANN 276




21|Sequence|101|110|NNQDKLGFED

>sp|RFRNP_STAMF|RNA-FREE ribonuclease P|Staphylothermus marinus (strain ATCC 43588

Query: 3 QDKLGFED 10
QDK GFE+
Sbjct: 132 QDKKGFEE 139


>sp|AROE_METTH|SHIKIMATE dehydrogenase (NADP(+))|Methanothermobacter thermautotrophicus

Query: 4 DKLGFE 9
DKLGFE
Sbjct: 168 DKLGFE 173


>sp|SYFA_ARCFU|PHENYLALANINE--TRNA ligase alpha subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 KLGFED 10
K+GFED
Sbjct: 381 KMGFED 386


>sp|PGK_METTH|PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 KLGFED 10
K+GFED
Sbjct: 373 KMGFED 378


>sp|Y773_METJA|UNCHARACTERIZED protein MJ0773|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DKLGFE 9
DK+GFE
Sbjct: 109 DKIGFE 114


>sp|SYW_THEON|TRYPTOPHAN--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 QDKLGFED 10
+DKL FED
Sbjct: 120 KDKLTFED 127


>sp|PURQ_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 NNQDKLGFED 10
NNQ L FED
Sbjct: 163 NNQIVLTFED 172


>sp|Y959_METJA|UNCHARACTERIZED aminotransferase MJ0959|Methanocaldococcus jannaschii (strain ATCC

Query: 2 NQDKLGF 8
N DK+GF
Sbjct: 218 NDDKVGF 224


>sp|PRIS_PYRAB|DNA primase small subunit PriS|Pyrococcus abyssi (strain GE5 /

Query: 3 QDKLGFED 10
+++LGFED
Sbjct: 133 KEELGFED 140




22|Sequence|106|115|LGFEDGSVLK

>sp|CARA_METMA|CARBAMOYL phosphate synthase small chain|Methanosarcina mazei (strain ATCC

Query: 1 LGFEDGSVLK 10
LG EDG+V+K
Sbjct: 5 LGLEDGTVIK 14


>sp|CARA_METAC|CARBAMOYL phosphate synthase small chain|Methanosarcina acetivorans (strain

Query: 1 LGFEDGSVLK 10
LG EDG+V++
Sbjct: 5 LGLEDGTVIR 14


>sp|MFND_METJA|TYRAMINE--L-GLUTAMATE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GFEDGSVLK 10
GFED ++LK
Sbjct: 28 GFEDKNILK 36


>sp|RS4E_THEVO|SMALL ribosomal subunit protein eS4|Thermoplasma volcanium (strain ATCC

Query: 1 LGFEDGSVL 9
LGF DG V+
Sbjct: 133 LGFHDGRVM 141


>sp|Y1126_METTH|UNCHARACTERIZED protein MTH_1126|Methanothermobacter thermautotrophicus (strain

Query: 1 LGFEDGSVLK 10
LGF+D +LK
Sbjct: 341 LGFKDKQILK 350


>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 GFEDGSV 8
G+EDG+V
Sbjct: 417 GYEDGAV 423


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LGFEDGSVLK 10
LG E G V+K
Sbjct: 971 LGIESGDVIK 980


>sp|Y2033_THEKO|UPF0215 protein TK2033|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LGFEDGS 7
LGF+DG+
Sbjct: 12 LGFDDGT 18


>sp|RL2_NITMS|LARGE ribosomal subunit protein uL2|Nitrosopumilus maritimus (strain

Query: 3 FEDGSV 8
FEDGSV
Sbjct: 62 FEDGSV 67


>sp|CARA_METJA|CARBAMOYL phosphate synthase small chain|Methanocaldococcus jannaschii

Query: 1 LGFEDGSVLK 10
L EDG++LK
Sbjct: 5 LILEDGTILK 14


>sp|CHEA_HALS3|CHEMOTAXIS protein CheA|Halobacterium salinarum (strain ATCC 29341

Query: 1 LGFEDGSVL 9
+GFED S L
Sbjct: 53 MGFEDASDL 61


>sp|Y981_METJA|UNCHARACTERIZED protein MJ0981|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GFEDGSVLK 10
GFE+ VLK
Sbjct: 15 GFEEQEVLK 23


>sp|DNAG_METPE|DNA primase DnaG|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 FEDGSV 8
FEDGS+
Sbjct: 130 FEDGSI 135


>sp|HEM3_IGNH4|PROBABLE porphobilinogen deaminase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LGFEDGSVLK 10
+ FE+GS+++
Sbjct: 247 IAFEEGSLIR 256




23|Sequence|111|120|GSVLKQFLSE

>sp|RS5_SULAC|SMALL ribosomal subunit protein uS5|Sulfolobus acidocaldarius (strain

Query: 1 GSVLKQFLS 9
GSVLK FLS
Sbjct: 161 GSVLKTFLS 169


>sp|RS6E_PYRIL|SMALL ribosomal subunit protein eS6|Pyrobaculum islandicum (strain DSM

Query: 1 GSVLKQFL 8
GSVLK FL
Sbjct: 40 GSVLKDFL 47


>sp|AROA_METTP|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanothrix thermoacetophila (strain DSM

Query: 1 GSVLKQFLS 9
GSV QFLS
Sbjct: 159 GSVSSQFLS 167


>sp|TOP6B_SACI1|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 LKQFLSE 10
LKQ+LSE
Sbjct: 451 LKQYLSE 457


>sp|TOP6B_SACSH|TYPE 2 DNA topoisomerase 6|Saccharolobus shibatae (strain ATCC 51178

Query: 4 LKQFLSE 10
LKQ+LSE
Sbjct: 451 LKQYLSE 457


>sp|TOP6B_SACI7|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 LKQFLSE 10
LKQ+LSE
Sbjct: 451 LKQYLSE 457


>sp|TOP6B_SACI6|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.4 /

Query: 4 LKQFLSE 10
LKQ+LSE
Sbjct: 451 LKQYLSE 457


>sp|TOP6B_SACI4|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.14.25 /

Query: 4 LKQFLSE 10
LKQ+LSE
Sbjct: 451 LKQYLSE 457


>sp|TOP6B_SACI3|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.27)

Query: 4 LKQFLSE 10
LKQ+LSE
Sbjct: 451 LKQYLSE 457


>sp|TOP6B_SACI2|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 LKQFLSE 10
LKQ+LSE
Sbjct: 451 LKQYLSE 457




24|Sequence|116|125|QFLSETEKMS

>sp|RL1_METHJ|LARGE ribosomal subunit protein uL1|Methanospirillum hungatei JF-1

Query: 2 FLSETEKMS 10
FL+ET+ MS
Sbjct: 107 FLAETQVMS 115




25|Sequence|121|130|TEKMSPEDRA

>sp|THSG_SACSH|CHAPERONIN subunit gamma|Saccharolobus shibatae (strain ATCC 51178

Query: 2 EKMSPEDR 9
+K+SPEDR
Sbjct: 136 DKISPEDR 143


>sp|THSG_SACS2|CHAPERONIN subunit gamma|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EKMSPEDR 9
+K+SPEDR
Sbjct: 136 DKISPEDR 143


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 TEKMSPEDR 9
TE++ PEDR
Sbjct: 263 TEELDPEDR 271


>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 EKMSPED 8
EKMSPE+
Sbjct: 180 EKMSPEE 186


>sp|MOAA_METTM|PROBABLE GTP 3',8-cyclase|Methanothermobacter marburgensis (strain ATCC

Query: 2 EKMSPED 8
E+MSPED
Sbjct: 39 EEMSPED 45


>sp|LYSJ_AERPE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 EKMSPEDRA 10
EK+ PED A
Sbjct: 165 EKLVPEDTA 173


>sp|ENDA_PYRAB|TRNA-SPLICING endonuclease|Pyrococcus abyssi (strain GE5 /

Query: 1 TEKMSPED 8
+EK+SP D
Sbjct: 127 SEKLSPND 134




26|Sequence|126|135|PEDRAKCFEK

>sp|PSA_THESM|PROTEASOME subunit alpha|Thermococcus sibiricus (strain DSM 12597

Query: 1 PEDRAKCFEK 10
PE+ AKC E+
Sbjct: 227 PEEVAKCLEE 236


>sp|Y844_ARCFU|UNCHARACTERIZED protein AF_0844|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EDRAKCF 8
ED AKCF
Sbjct: 74 EDEAKCF 80


>sp|RS26_SACS2|SMALL ribosomal subunit protein eS26|Saccharolobus solfataricus (strain

Query: 1 PEDRAKCFEK 10
PED+A C K
Sbjct: 31 PEDKAVCVTK 40


>sp|SYFB_HALLT|PHENYLALANINE--TRNA ligase beta subunit|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PEDRAKCFEK 10
PE+ CFE+
Sbjct: 314 PEEIVDCFER 323


>sp|NADK_METST|NAD kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PEDRAKCFEK 10
PED +C +K
Sbjct: 99 PEDIFECLDK 108


>sp|COOS_METJA|CARBON monoxide dehydrogenase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PEDRAKCFEK 10
PE R + FEK
Sbjct: 163 PEKRLEVFEK 172


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PEDRAKCFEK 10
PED + FEK
Sbjct: 222 PEDNLELFEK 231


>sp|RAD50_METMA|DNA double-strand break repair Rad50|Methanosarcina mazei (strain ATCC

Query: 1 PEDRAKCF 8
ED+A CF
Sbjct: 269 QEDKAACF 276


>sp|RAD50_METAC|DNA double-strand break repair Rad50|Methanosarcina acetivorans (strain

Query: 1 PEDRAKCF 8
ED+A CF
Sbjct: 269 QEDKAGCF 276




27|Sequence|131|140|KCFEKNEAIQ

>sp|FSX1_UNCAX|FUSEXIN 1|Uncultured archaeon

Query: 2 CFEKNEAI 9
CF+KNE +
Sbjct: 155 CFQKNEKL 162


>sp|CYAS_METBU|CYSTEATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 KCFEKNEAI 9
K FE+NE I
Sbjct: 330 KIFEENEGI 338


>sp|GCH1L_ARCFU|GTP cyclohydrolase 1 type 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CFEKNEAI 9
CF NEAI
Sbjct: 174 CFALNEAI 181


>sp|PUR5_METM5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C5 /

Query: 3 FEKNEAIQ 10
FE+N+AI+
Sbjct: 27 FERNDAIK 34




28|Sequence|136|145|NEAIQAAHDA

>sp|TRPB2_THEKO|TRYPTOPHAN synthase beta chain 2|Thermococcus kodakarensis (strain ATCC

Query: 1 NEAIQAAH 8
NE QAAH
Sbjct: 361 NEVFQAAH 368


>sp|ENO_AERPE|ENOLASE pernix (strain ATCC 700893

Query: 2 EAIQAAHD 9
EAIQAA D
Sbjct: 352 EAIQAARD 359


>sp|RFCL_HALSA|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 700922

Query: 2 EAIQAAHD 9
EA+QAA+D
Sbjct: 243 EALQAAYD 250


>sp|RFCL_HALS3|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 29341

Query: 2 EAIQAAHD 9
EA+QAA+D
Sbjct: 243 EALQAAYD 250


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 NEAIQAAHD 9
+EAIQ+A+D
Sbjct: 719 DEAIQSAYD 727


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 NEAIQAAHD 9
+EAIQ+A+D
Sbjct: 719 DEAIQSAYD 727


>sp|PGK_THESM|PHOSPHOGLYCERATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 NEAIQAAH 8
NEA AAH
Sbjct: 146 NEAFAAAH 153


>sp|RL10E_METAR|LARGE ribosomal subunit protein uL16|Methanocella arvoryzae (strain DSM

Query: 1 NEAIQAAHDA 10
NE Q HDA
Sbjct: 52 NETCQIRHDA 61




29|Sequence|141|150|AAHDAVAQEG

>sp|PUR2_METLZ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 AAHDAVAQEG 10
A DA+AQEG
Sbjct: 253 ATIDALAQEG 262




30|Sequence|146|155|VAQEGQCRVD

>sp|ARCSA_METAC|ARCHAEOSINE synthase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 4 EGQCRV 9
EGQCRV
Sbjct: 267 EGQCRV 272


>sp|Y807_METJA|PUTATIVE lyase MJ0807|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EGQCRVD 10
EG+CRV+
Sbjct: 49 EGECRVE 55


>sp|GATE_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina mazei (strain ATCC

Query: 4 EGQCRVD 10
EG+CR+D
Sbjct: 149 EGRCRID 155


>sp|NIFB_METJA|FEMO cofactor biosynthesis protein NifB|Methanocaldococcus jannaschii

Query: 5 GQCRVD 10
GQCR D
Sbjct: 263 GQCRAD 268


>sp|AMZA_PYRAE|ARCHAEMETZINCIN aerophilum (strain ATCC 51768

Query: 5 GQCRVD 10
GQCR D
Sbjct: 41 GQCRAD 46


>sp|Y993_METJA|PUTATIVE hydrogenase expression/formation protein MJ0993|Methanocaldococcus

Query: 1 VAQEGQCRV 9
V+ EG CR+
Sbjct: 343 VSDEGTCRI 351


>sp|NIFB_METIM|FEMO cofactor biosynthesis protein NifB|Methanocaldococcus infernus

Query: 5 GQCRVD 10
GQCR D
Sbjct: 261 GQCRAD 266


>sp|KDPQ_HALS3|PROBABLE Kdp system regulatory protein|Halobacterium salinarum (strain ATCC

Query: 1 VAQEGQC 7
+AQE QC
Sbjct: 251 IAQEAQC 257


>sp|MDH_NATPD|MALATE dehydrogenase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 QEGQCRVD 10
+EGQ R+D
Sbjct: 84 KEGQTRID 91




31|Sequence|151|160|QCRVDDKVNF

>sp|MTTB_METBF|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri (strain Fusaro /

Query: 2 CRVDDKVN 9
C VD+K N
Sbjct: 58 CEVDEKTN 65


>sp|MTTB2_METAC|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina acetivorans (strain ATCC

Query: 2 CRVDDKVN 9
C VD+K N
Sbjct: 58 CEVDEKTN 65


>sp|MTTB1_METAC|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina acetivorans (strain ATCC

Query: 2 CRVDDKVN 9
C VD+K N
Sbjct: 58 CEVDEKTN 65


>sp|COBD_THEKO|PROBABLE cobalamin biosynthesis protein CobD|Thermococcus kodakarensis

Query: 3 RVDDKVNF 10
R+DD +NF
Sbjct: 191 RLDDALNF 198


>sp|RS4E_CALMQ|SMALL ribosomal subunit protein eS4|Caldivirga maquilingensis (strain

Query: 2 CRVDDK 7
CR++DK
Sbjct: 119 CRIEDK 124


>sp|UBIX_PYRHO|FLAVIN prenyltransferase UbiX|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 VDDKVNF 10
+DD VNF
Sbjct: 150 IDDMVNF 156


>sp|Y1401_METJA|PROBABLE ATP-dependent helicase MJ1401|Methanocaldococcus jannaschii

Query: 1 QCRVDDKV 8
+CRV DK+
Sbjct: 50 RCRVGDKL 57


>sp|Y297_METJA|UNCHARACTERIZED protein MJ0297|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 DDKVNF 10
DDK+NF
Sbjct: 8 DDKMNF 13




32|Sequence|156|165|DKVNFHFILF

>sp|VHCA_METVO|F420-NON-REDUCING hydrogenase vhc subunit A|Methanococcus voltae

Query: 1 DKVNFHFI 8
DKVNFH +
Sbjct: 29 DKVNFHVV 36


>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 DKVNFHFILF 10
D + FH I+F
Sbjct: 308 DNIPFHTIIF 317


>sp|CBIM2_METBF|PUTATIVE cobalt transport protein CbiM|Methanosarcina barkeri (strain Fusaro

Query: 2 KVNFHFILF 10
K+NF+ I+F
Sbjct: 134 KLNFYLIVF 142


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 DKVNFHFILF 10
D + FH I+F
Sbjct: 293 DNIPFHTIIF 302


>sp|RPO1C_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DKVNFHFIL 9
D +NF FI+
Sbjct: 155 DLINFEFIV 163


>sp|PELO_THEON|PROTEIN pelota homolog|Thermococcus onnurineus (strain NA1)

Query: 1 DKVNFH 6
+K+NFH
Sbjct: 68 EKINFH 73


>sp|PELO_THEKO|PROTEIN pelota homolog|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DKVNFH 6
+K+NFH
Sbjct: 68 EKINFH 73


>sp|PELO_THEGJ|PROTEIN pelota homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 1 DKVNFH 6
+K+NFH
Sbjct: 68 EKINFH 73


>sp|PELO_PYRHO|PROTEIN pelota homolog|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DKVNFH 6
+K+NFH
Sbjct: 68 EKINFH 73


>sp|PELO_METST|PROTEIN pelota homolog|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DKVNFH 6
+K+NFH
Sbjct: 69 EKINFH 74


>sp|PELO_METM7|PROTEIN pelota homolog|Methanococcus maripaludis (strain C7 /

Query: 1 DKVNFH 6
+K+NFH
Sbjct: 68 EKINFH 73


>sp|PELO_METM6|PROTEIN pelota homolog|Methanococcus maripaludis (strain C6 /

Query: 1 DKVNFH 6
+K+NFH
Sbjct: 68 EKINFH 73


>sp|PELO_METM5|PROTEIN pelota homolog|Methanococcus maripaludis (strain C5 /

Query: 1 DKVNFH 6
+K+NFH
Sbjct: 68 EKINFH 73


>sp|PELO_METMP|PROTEIN pelota homolog|Methanococcus maripaludis (strain DSM 14266

Query: 1 DKVNFH 6
+K+NFH
Sbjct: 68 EKINFH 73




33|Sequence|161|170|HFILFNNVDG

>sp|SYFA_THESM|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus sibiricus (strain DSM 12597

Query: 1 HFILFNNVDG 10
H I FN VDG
Sbjct: 379 HLIEFNQVDG 388


>sp|SYFA_THEON|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus onnurineus (strain NA1)

Query: 1 HFILFNNVDG 10
H I FN VDG
Sbjct: 376 HLIEFNQVDG 385


>sp|SYFA_THEKO|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HFILFNNVDG 10
H I FN +DG
Sbjct: 377 HLIEFNQIDG 386


>sp|SYFA_THEGJ|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 1 HFILFNNVDG 10
H I FN +DG
Sbjct: 375 HLIEFNQIDG 384


>sp|SYFA_PYRHO|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HFILFNNVDG 10
H I FN +DG
Sbjct: 375 HLIEFNQIDG 384


>sp|SYFA_PYRFU|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HFILFNNVDG 10
H I FN +DG
Sbjct: 375 HLIEFNQIDG 384


>sp|SYFA_PYRAB|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 HFILFNNVDG 10
H I FN +DG
Sbjct: 376 HLIEFNQIDG 385


>sp|HIS4_METJA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanocaldococcus jannaschii

Query: 2 FILFNNVD 9
+ILF NVD
Sbjct: 161 YILFTNVD 168


>sp|KTHY_METVS|PROBABLE thymidylate kinase|Methanococcus vannielii (strain ATCC 35089

Query: 2 FILFNNVDG 10
FI+F +DG
Sbjct: 4 FIVFEGIDG 12


>sp|KTHY_METM7|PROBABLE thymidylate kinase|Methanococcus maripaludis (strain C7 /

Query: 2 FILFNNVDG 10
FI+F +DG
Sbjct: 4 FIVFEGIDG 12


>sp|KTHY_METM6|PROBABLE thymidylate kinase|Methanococcus maripaludis (strain C6 /

Query: 2 FILFNNVDG 10
FI+F +DG
Sbjct: 4 FIVFEGIDG 12


>sp|KTHY_METJA|PROBABLE thymidylate kinase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 FILFNNVDG 10
FI+F +DG
Sbjct: 6 FIVFEGIDG 14


>sp|HIS4_METB6|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanoregula boonei (strain DSM

Query: 2 FILFNNVD 9
F+L+ NVD
Sbjct: 161 FLLYTNVD 168


>sp|KTHY_METM5|PROBABLE thymidylate kinase|Methanococcus maripaludis (strain C5 /

Query: 2 FILFNNVDG 10
FI+F +DG
Sbjct: 4 FIVFEGIDG 12


>sp|NRPR_METMP|GLOBAL nitrogen regulator NrpR|Methanococcus maripaludis (strain DSM 14266

Query: 1 HFILFNNVDG 10
H + FN DG
Sbjct: 435 HEVFFNKADG 444


>sp|G1PDH_CALMQ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Caldivirga maquilingensis (strain ATCC

Query: 1 HFILFNNVD 9
H I+ NNV+
Sbjct: 203 HMIIMNNVN 211


>sp|PROB_METBU|GLUTAMATE 5-kinase|Methanococcoides burtonii (strain DSM 6242

Query: 2 FILFNNVDG 10
ILF ++DG
Sbjct: 174 LILFTDIDG 182


>sp|HIS4_METVS|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus vannielii (strain

Query: 3 ILFNNVD 9
ILF NVD
Sbjct: 164 ILFTNVD 170


>sp|HIS4_METVA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus vannielii

Query: 3 ILFNNVD 9
ILF NVD
Sbjct: 164 ILFTNVD 170


>sp|HIS4_METTH|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanothermobacter

Query: 3 ILFNNVD 9
ILF NVD
Sbjct: 163 ILFTNVD 169


>sp|HIS4_METST|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanosphaera stadtmanae (strain

Query: 3 ILFNNVD 9
ILF NVD
Sbjct: 163 ILFTNVD 169


>sp|HIS4_METMP|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis (strain

Query: 3 ILFNNVD 9
ILF NVD
Sbjct: 164 ILFTNVD 170


>sp|HIS4_METM7|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis (strain

Query: 3 ILFNNVD 9
ILF NVD
Sbjct: 164 ILFTNVD 170


>sp|HIS4_METM6|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis (strain

Query: 3 ILFNNVD 9
ILF NVD
Sbjct: 164 ILFTNVD 170


>sp|HIS4_METM5|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis (strain

Query: 3 ILFNNVD 9
ILF NVD
Sbjct: 164 ILFTNVD 170


>sp|HIS4_META3|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus aeolicus (strain

Query: 3 ILFNNVD 9
ILF NVD
Sbjct: 165 ILFTNVD 171


>sp|RFCL_PYRNV|REPLICATION factor C large subunit|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 FILFNNVDG 10
+LF+ VDG
Sbjct: 118 LVLFDEVDG 126


>sp|RFCL_PYRIL|REPLICATION factor C large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 2 FILFNNVDG 10
+LF+ VDG
Sbjct: 118 LVLFDEVDG 126


>sp|KTHY_METMP|PROBABLE thymidylate kinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 FILFNNVDG 10
FI+F +DG
Sbjct: 4 FIVFEGIDG 12


>sp|CHED2_METAC|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina acetivorans

Query: 3 ILFNNVDG 10
++FN VDG
Sbjct: 199 VIFNPVDG 206


>sp|HIS4_METVO|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus voltae

Query: 3 ILFNNVD 9
ILF NVD
Sbjct: 164 ILFTNVD 170


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 HFILFNNV 8
+F+LFN++
Sbjct: 740 YFLLFNDI 747


>sp|RFCL_PYRCJ|REPLICATION factor C large subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 ILFNNVDG 10
+LF+ VDG
Sbjct: 119 VLFDEVDG 126


>sp|RFCL_PYRAR|REPLICATION factor C large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 ILFNNVDG 10
+LF+ VDG
Sbjct: 119 VLFDEVDG 126


>sp|RFCL_PYRAE|REPLICATION factor C large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 ILFNNVDG 10
+LF+ VDG
Sbjct: 119 VLFDEVDG 126


>sp|TRM1_METJA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocaldococcus

Query: 1 HFILFNNVD 9
HF FN VD
Sbjct: 121 HFRFFNVVD 129


>sp|KTHY_META3|PROBABLE thymidylate kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 FILFNNVDG 10
FI+F +DG
Sbjct: 4 FIVFEGIDG 12


>sp|DNLI_SULTO|DNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HFILFNNVD 9
H I NNVD
Sbjct: 386 HHIYTNNVD 394


>sp|LYSJ_SULAC|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfolobus

Query: 2 FILFNNVD 9
F+ FNN++
Sbjct: 152 FLTFNNIE 159


>sp|AMPD_METMA|ANHYDROMEVALONATE phosphate decarboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 ILFNNVDG 10
+LF+NV G
Sbjct: 40 VLFHNVSG 47




34|Sequence|166|175|NNVDGHLYEL

>sp|TRM1_THEKO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus kodakarensis

Query: 2 NVDGHLYE 9
N+DG LYE
Sbjct: 94 NIDGELYE 101


>sp|RIO1_METJA|RIO-TYPE serine/threonine-protein kinase Rio1|Methanocaldococcus

Query: 2 NVDGHLYEL 10
N+D LYEL
Sbjct: 12 NIDDELYEL 20


>sp|AATA_METB6|A-TYPE ATP synthase subunit A|Methanoregula boonei (strain DSM 21154

Query: 2 NVDGHLYEL 10
N+D H+Y++
Sbjct: 28 NLDAHMYDV 36


>sp|AATA1_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain

Query: 2 NVDGHLYEL 10
N+D H+Y++
Sbjct: 22 NLDAHMYDV 30


>sp|URED_HALMA|UREASE accessory protein UreD|Haloarcula marismortui (strain ATCC 43049

Query: 4 DGHLYE 9
DGHL+E
Sbjct: 191 DGHLFE 196


>sp|TOP6B_METAC|TYPE 2 DNA topoisomerase 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NNVDGHLYEL 10
+NV H YEL
Sbjct: 140 SNVPAHYYEL 149


>sp|PURP_CALMQ|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Caldivirga maquilingensis (strain ATCC

Query: 1 NNVDGHLYEL 10
+NVDG L+ L
Sbjct: 214 SNVDGRLFNL 223


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 GHLYEL 10
GH+YEL
Sbjct: 683 GHIYEL 688


>sp|SPEE_KORCO|POLYAMINE aminopropyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 NVDGHLYEL 10
N+DGHL L
Sbjct: 19 NIDGHLLYL 27


>sp|DMSA_HALSA|PUTATIVE dimethyl sulfoxide reductase catalytic|Halobacterium salinarum

Query: 3 VDGHLYEL 10
VDGHL +L
Sbjct: 779 VDGHLQDL 786


>sp|RGYRA_NANEQ|REVERSE gyrase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 5 GHLYEL 10
GHL+EL
Sbjct: 89 GHLFEL 94


>sp|SDX_SULTO|SULREDOXIN tokodaii (strain DSM 16993

Query: 2 NVDGHLYEL 10
NV+G+LY +
Sbjct: 31 NVNGNLYAM 39


>sp|Y408_ARCFU|UNCHARACTERIZED protein AF_0408|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NNVDGHLY 8
+N+DG LY
Sbjct: 234 DNLDGELY 241


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 NVDGHLYEL 10
+ DG+LY+L
Sbjct: 2043 DYDGYLYDL 2051


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 4 DGHLYE 9
DGH YE
Sbjct: 930 DGHYYE 935


>sp|Y271_METJA|UNCHARACTERIZED protein MJ0271|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NNVDGHLYE 9
NN++ LYE
Sbjct: 48 NNINERLYE 56


>sp|NTPTH_METS5|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Metallosphaera sedula (strain ATCC 51363

Query: 2 NVDGHLYEL 10
N++G YEL
Sbjct: 143 NIEGKRYEL 151


>sp|FPOH_METMA|F(420)H(2) dehydrogenase subunit H|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VDGHLYEL 10
+DG+LY L
Sbjct: 114 IDGNLYPL 121


>sp|CBIA_THEAC|COBYRINATE a,c-diamide synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 NVDGHLY 8
+ DGH+Y
Sbjct: 339 STDGHIY 345


>sp|Y771_METTH|UPF0047 protein MTH_771|Methanothermobacter thermautotrophicus (strain

Query: 1 NNVDGHL 7
NN D HL
Sbjct: 90 NNADSHL 96


>sp|Y1771_AERPE|MEMO1 family protein APE_1771|Aeropyrum pernix (strain ATCC 700893

Query: 4 DGHLYE 9
+GH+YE
Sbjct: 132 EGHIYE 137


>sp|G3P_METFO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium formicicum

Query: 1 NNVDGHLY 8
N VDG LY
Sbjct: 288 NIVDGELY 295




35|Sequence|171|180|HLYELDGRMP

>sp|PUS10_VULDI|TRNA pseudouridine synthase Pus10|Vulcanisaeta distributa (strain DSM

Query: 2 LYELDGRM 9
+YELDGR+
Sbjct: 352 VYELDGRV 359


>sp|SURE_NATPD|5'-NUCLEOTIDASE SurE|Natronomonas pharaonis (strain ATCC 35678

Query: 1 HLYELDG 7
H+YE+DG
Sbjct: 188 HVYEMDG 194


>sp|PHR_METTM|DEOXYRIBODIPYRIMIDINE photo-lyase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 3 YELDGRMP 10
YE+DGR P
Sbjct: 385 YEIDGRDP 392


>sp|PHR_METTH|DEOXYRIBODIPYRIMIDINE photo-lyase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 YELDGRMP 10
YE+DGR P
Sbjct: 385 YEIDGRDP 392


>sp|PHNC1_NATPD|PHOSPHONATES import ATP-binding protein PhnC|Natronomonas pharaonis (strain

Query: 4 ELDGRMP 10
ELDGR P
Sbjct: 59 ELDGRAP 65


>sp|SURE_HALMA|5'-NUCLEOTIDASE SurE|Haloarcula marismortui (strain ATCC 43049

Query: 1 HLYELDG 7
HLYE+D
Sbjct: 191 HLYEMDA 197


>sp|SYFB_SULTO|PHENYLALANINE--TRNA ligase beta subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 LDGRMP 10
LDG+MP
Sbjct: 187 LDGKMP 192


>sp|APGM2_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Archaeoglobus fulgidus (strain ATCC

Query: 1 HLYELDGRMP 10
+ ELDGR P
Sbjct: 15 EVEELDGRTP 24


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HLYELDGR 8
H+Y+++GR
Sbjct: 481 HVYDMEGR 488


>sp|THIM_METS3|HYDROXYETHYLTHIAZOLE kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 HLYELDGR 8
+LY+LDG+
Sbjct: 269 YLYKLDGQ 276


>sp|Y1623_METJA|UNCHARACTERIZED protein MJ1623|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LYELDGR 8
+YELDG+
Sbjct: 221 VYELDGK 227


>sp|RSMA_METKA|PROBABLE ribosomal RNA small subunit|Methanopyrus kandleri (strain AV19 /

Query: 4 ELDGRM 9
ELDGRM
Sbjct: 73 ELDGRM 78


>sp|UPPS_THEAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Thermoplasma

Query: 2 LYELDGRMP 10
+Y DGR+P
Sbjct: 192 MYLYDGRIP 200


>sp|PURA_THEVO|ADENYLOSUCCINATE synthetase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 YELDGR 8
YELDG+
Sbjct: 353 YELDGK 358


>sp|ENO_SULAC|ENOLASE acidocaldarius (strain ATCC 33909

Query: 3 YELDGR 8
YELDG+
Sbjct: 251 YELDGK 256


>sp|SYS2_METVS|TYPE-2 serine--tRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 YELDGRM 9
+ELDGR+
Sbjct: 3 FELDGRI 9


>sp|DTDA_STAMF|D-AMINOACYL-TRNA deacylase|Staphylothermus marinus (strain ATCC 43588

Query: 5 LDGRMP 10
LDGR+P
Sbjct: 61 LDGRLP 66


>sp|HIS4_METMP|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis

Query: 1 HLYELDGRM 9
HL +LDG +
Sbjct: 48 HLVDLDGAL 56


>sp|HIS4_METM7|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis

Query: 1 HLYELDGRM 9
HL +LDG +
Sbjct: 48 HLVDLDGAL 56


>sp|HIS4_METM6|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis

Query: 1 HLYELDGRM 9
HL +LDG +
Sbjct: 48 HLVDLDGAL 56


>sp|HIS4_METM5|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis

Query: 1 HLYELDGRM 9
HL +LDG +
Sbjct: 48 HLVDLDGAL 56




36|Sequence|176|185|DGRMPFPVNH

>sp|CAS1B_ARCFU|CRISPR-ASSOCIATED endonuclease Cas1 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DGRMPFPVN 9
DG+ P P+N
Sbjct: 27 DGKRPIPIN 35


>sp|FER2_HALMA|FERREDOXIN-2 marismortui (strain ATCC 43049

Query: 1 DGRMPFPVNH 10
DG MP P +H
Sbjct: 76 DGEMPSPASH 85


>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 1 DGRMPFPVN 9
+GR P PVN
Sbjct: 442 EGRWPVPVN 450


>sp|Y998_META3|DNA-BINDING protein Maeo_0998|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GRMPFPVN 9
GR+P PV+
Sbjct: 84 GRLPIPVS 91


>sp|RL1_METMJ|LARGE ribosomal subunit protein uL1|Methanoculleus marisnigri (strain

Query: 2 GRMPFPV 8
GRMP PV
Sbjct: 128 GRMPMPV 134


>sp|RNP4_METVS|RIBONUCLEASE P protein component 4|Methanococcus vannielii (strain ATCC 35089

Query: 3 RMPFP 7
RMPFP
Sbjct: 53 RMPFP 57


>sp|RL1_METB6|LARGE ribosomal subunit protein uL1|Methanoregula boonei (strain DSM

Query: 2 GRMPFPV 8
GRMP P+
Sbjct: 129 GRMPMPI 135


>sp|COBD_METJA|PROBABLE cobalamin biosynthesis protein CobD|Methanocaldococcus jannaschii

Query: 4 MPFPVNH 10
+PFP+N+
Sbjct: 81 LPFPLNY 87


>sp|RRP42_THEKO|EXOSOME complex component Rrp42|Thermococcus kodakarensis (strain ATCC

Query: 5 PFPVNH 10
P PVNH
Sbjct: 186 PLPVNH 191


>sp|Y1487_METJA|UNCHARACTERIZED methyltransferase MJ1487|Methanocaldococcus jannaschii (strain ATCC

Query: 5 PFPVNH 10
PFPV H
Sbjct: 166 PFPVKH 171


>sp|Y3407_METJA|UNCHARACTERIZED protein MJECS07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 MPFPVN 9
+PFP+N
Sbjct: 235 IPFPIN 240


>sp|RL1_METHJ|LARGE ribosomal subunit protein uL1|Methanospirillum hungatei JF-1

Query: 2 GRMPFPV 8
GRMP P+
Sbjct: 129 GRMPQPI 135


>sp|RNZ_IGNH4|RIBONUCLEASE Z|Ignicoccus hospitalis (strain KIN4/I /

Query: 6 FPVNH 10
FPVNH
Sbjct: 136 FPVNH 140


>sp|Y883_PYRHO|IRON-SULFUR cluster assembly SufBD family|Pyrococcus horikoshii (strain ATCC

Query: 1 DGRMPFPVNH 10
DG M +NH
Sbjct: 7 DGSMTIKINH 16


>sp|THIC_NATPD|PHOSPHOMETHYLPYRIMIDINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DGRMPFPVNH 10
DG+ P NH
Sbjct: 37 DGQAVIPANH 46




37|Sequence|181|190|FPVNHGASSE

>sp|ARFB_METIM|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanocaldococcus infernus (strain

Query: 1 FPVNHGASSE 10
FP+ H A+ E
Sbjct: 134 FPLTHAATEE 143


>sp|KAE1_SULTO|TRNA N6-adenosine threonylcarbamoyltransferase|Sulfurisphaera tokodaii

Query: 2 PVNHG 6
PVNHG
Sbjct: 108 PVNHG 112


>sp|KAE1_SACS2|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 2 PVNHG 6
PVNHG
Sbjct: 106 PVNHG 110


>sp|KAE1_SACI7|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 PVNHG 6
PVNHG
Sbjct: 106 PVNHG 110


>sp|KAE1_SACI6|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 PVNHG 6
PVNHG
Sbjct: 106 PVNHG 110


>sp|KAE1_SACI4|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 PVNHG 6
PVNHG
Sbjct: 106 PVNHG 110


>sp|KAE1_SACI3|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 PVNHG 6
PVNHG
Sbjct: 106 PVNHG 110


>sp|KAE1_SACI2|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 PVNHG 6
PVNHG
Sbjct: 106 PVNHG 110


>sp|KAE1_SULAC|TRNA N6-adenosine threonylcarbamoyltransferase|Sulfolobus acidocaldarius

Query: 2 PVNHG 6
PVNHG
Sbjct: 108 PVNHG 112


>sp|RNZ_IGNH4|RIBONUCLEASE Z|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 FPVNH 5
FPVNH
Sbjct: 136 FPVNH 140


>sp|KAE1_METS5|TRNA N6-adenosine threonylcarbamoyltransferase|Metallosphaera sedula

Query: 2 PVNHG 6
PVNHG
Sbjct: 106 PVNHG 110


>sp|Y4020_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 PVNHGASSE 10
P+N G SSE
Sbjct: 147 PINMGLSSE 155


>sp|PRIS_METMP|DNA primase small subunit PriS|Methanococcus maripaludis (strain DSM

Query: 2 PVNHGASSE 10
P+NHG S+
Sbjct: 299 PLNHGVFSK 307


>sp|PRIS_METM7|DNA primase small subunit PriS|Methanococcus maripaludis (strain C7 /

Query: 2 PVNHGASSE 10
P+NHG S+
Sbjct: 305 PLNHGVFSK 313


>sp|PRIS_METM6|DNA primase small subunit PriS|Methanococcus maripaludis (strain C6 /

Query: 2 PVNHGASSE 10
P+NHG S+
Sbjct: 299 PLNHGVFSK 307


>sp|PRIS_METM5|DNA primase small subunit PriS|Methanococcus maripaludis (strain C5 /

Query: 2 PVNHGASSE 10
P+NHG S+
Sbjct: 299 PLNHGVFSK 307


>sp|AMPPA_METLZ|AMP phosphorylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 PVNHGA 7
PV+HGA
Sbjct: 444 PVDHGA 449




38|Sequence|186|195|GASSEDTLLK

>sp|SUI1_PYRAE|PROTEIN translation factor SUI1 homolog|Pyrobaculum aerophilum (strain

Query: 1 GASSEDTLLK 10
GAS E+TL++
Sbjct: 19 GASEEETLMQ 28


>sp|DEOC_HALMA|DEOXYRIBOSE-PHOSPHATE aldolase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GASSEDTLLK 10
GASS DT+++
Sbjct: 195 GASSGDTIVR 204


>sp|BACS2_HALVA|SENSORY rhodopsin-2|Haloarcula vallismortis (Halobacterium vallismortis)

Query: 1 GASSEDTL 8
GAS EDT+
Sbjct: 92 GASREDTV 99


>sp|BACS2_HALMA|SENSORY rhodopsin II|Haloarcula marismortui (strain ATCC 43049

Query: 1 GASSEDTL 8
GAS EDT+
Sbjct: 92 GASREDTV 99


>sp|REG4_PYRAB|UNCHARACTERIZED HTH-type transcriptional regulator PYRAB09690|Pyrococcus abyssi

Query: 1 GASSEDTLLK 10
G SE++LLK
Sbjct: 117 GGESEESLLK 126




39|Sequence|191|200|DTLLKDAAKV

>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DTLLKDAAK 9
DT+L+DA++
Sbjct: 924 DTMLQDASR 932


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 1 DTLLKDAAK 9
D LLK+AAK
Sbjct: 137 DDLLKEAAK 145


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DTLLKDAAKV 10
DTLL DAA +
Sbjct: 933 DTLLSDAANL 942


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 DTLLKDAAKV 10
DT+L+DA ++
Sbjct: 996 DTMLRDANRL 1005


>sp|SPEH_PYRNV|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 TLLKDAAKV 10
T++K+AAKV
Sbjct: 34 TIVKEAAKV 42


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DTLLKDAAK 9
D+LL D+AK
Sbjct: 759 DSLLSDSAK 767


>sp|COFD_METPE|2-PHOSPHO-L-LACTATE transferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 DTLLKDAAK 9
DTL+KD K
Sbjct: 276 DTLMKDQEK 284


>sp|CBID_METBU|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 3 LLKDAAKV 10
L++DAAKV
Sbjct: 222 LIRDAAKV 229


>sp|MTM4_METJA|TYPE II methyltransferase M.MjaIV|Methanocaldococcus jannaschii

Query: 3 LLKDAAKV 10
LLKD AKV
Sbjct: 37 LLKDIAKV 44




40|Sequence|196|205|DAAKVCREFT

>sp|TRUB_METBF|PROBABLE tRNA pseudouridine synthase B|Methanosarcina barkeri (strain Fusaro

Query: 4 KVCREFT 10
KVC EFT
Sbjct: 123 KVCEEFT 129


>sp|TRUB_METAC|PROBABLE tRNA pseudouridine synthase B|Methanosarcina acetivorans (strain

Query: 4 KVCREFT 10
KVC EFT
Sbjct: 123 KVCEEFT 129


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 4 KVCREF 9
+VCREF
Sbjct: 636 RVCREF 641


>sp|Y009_METJA|UNCHARACTERIZED protein MJ0009|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 AKVCREF 9
+K+CR+F
Sbjct: 182 SKICRDF 188


>sp|PROB_METBU|GLUTAMATE 5-kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DAAKVC 6
DAAK+C
Sbjct: 228 DAAKIC 233


>sp|ATGT_METVS|TRNA-GUANINE(15) transglycosylase|Methanococcus vannielii (strain ATCC 35089

Query: 2 AAKVCREFT 10
+ KVC E+T
Sbjct: 281 SCKVCSEYT 289


>sp|PORA_METTM|PYRUVATE synthase subunit PorA|Methanothermobacter marburgensis (strain ATCC

Query: 3 AKVCREFT 10
AK C+EF+
Sbjct: 235 AKACQEFS 242


>sp|TRUB_METMA|PROBABLE tRNA pseudouridine synthase B|Methanosarcina mazei (strain ATCC

Query: 4 KVCREFT 10
+VC EFT
Sbjct: 123 QVCEEFT 129


>sp|APGM_METLZ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanocorpusculum labreanum (strain ATCC

Query: 3 AKVCREFT 10
A+VC EF+
Sbjct: 192 AEVCNEFS 199


>sp|ATGT_METM7|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C7 /

Query: 4 KVCREFT 10
KVC E+T
Sbjct: 283 KVCSEYT 289


>sp|ATGT_METM6|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C6 /

Query: 4 KVCREFT 10
KVC E+T
Sbjct: 283 KVCSEYT 289


>sp|ATGT_METM5|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C5 /

Query: 4 KVCREFT 10
KVC E+T
Sbjct: 283 KVCSEYT 289


>sp|ATGT_METMP|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain DSM 14266

Query: 4 KVCREFT 10
KVC E+T
Sbjct: 283 KVCSEYT 289


>sp|DHYS1_ARCFU|PROBABLE deoxyhypusine synthase 1|Archaeoglobus fulgidus (strain ATCC

Query: 1 DAAKVCRE 8
+AAK+C E
Sbjct: 33 EAAKICEE 40




41|Sequence|201|210|CREFTEREQG

>sp|THSA_THEAC|THERMOSOME subunit alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 REFTEREQG 10
+E T+REQG
Sbjct: 12 KEGTQREQG 20


>sp|MRE11_METJA|DNA double-strand break repair protein|Methanocaldococcus jannaschii

Query: 1 CREFTE 6
CREF E
Sbjct: 246 CREFVE 251


>sp|PORA_METTH|PYRUVATE synthase subunit PorA|Methanothermobacter thermautotrophicus

Query: 1 CREFTE---REQG 10
CREF+E RE G
Sbjct: 238 CREFSEMFGREYG 250




42|Sequence|206|215|EREQGEVRFS

>sp|Y1635_METJA|TNPB-LIKE protein MJ1635|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EREQGEVRFS 10
++E+GE+R +
Sbjct: 131 DKEKGEIRIT 140


>sp|Y009_METJA|UNCHARACTERIZED protein MJ0009|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EREQGEVRFS 10
E EQGE +FS
Sbjct: 212 EWEQGEKQFS 221


>sp|ENO2_METHJ|ENOLASE 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EREQGEVRF 9
ER GE RF
Sbjct: 51 ERRDGEKRF 59


>sp|MUTS2_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 2 REQGEVRF 9
RE G+VRF
Sbjct: 796 REDGDVRF 803




43|Sequence|211|223|EVRFSAVALCKAA

>sp|GRPE_METST|PROTEIN GrpE|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 VRFSAVALCK 11
+R+S V +CK
Sbjct: 163 IRYSKVKVCK 172






THE END