TRPM7_HUMAN Blast OutputR
Viruses
1|SequenceR|10|1|TSEIWSKQSM

>sp|GH_PSHV1|ENVELOPE glycoprotein H|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 TSEIWSKQ 8
T+E W+KQ
Sbjct: 345 TTETWAKQ 352




2|SequenceR|15|6|ERKTLTSEIW

>sp|YR402_MIMIV|UNCHARACTERIZED protein R402|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 LTSEIW 10
LTSE+W
Sbjct: 328 LTSELW 333


>sp|POLG_PEMVC|GENOME polyprotein|Pepper mottle virus (isolate California)

Query: 1 ERKTLTSEI 9
+RK LT+EI
Sbjct: 1181 QRKNLTTEI 1189




3|SequenceR|20|11|IIYVCERKTL

>sp|VP7_ROTGI|OUTER capsid glycoprotein VP7|Rotavirus B (isolate RVB/Rat/United

Query: 3 YVCERKT 9
Y+CERK+
Sbjct: 183 YICERKS 189


>sp|POLFS_SINV3|POLYPROTEIN-FSD invicta virus 3 (SINV-3)

Query: 3 YVCERK 8
Y+CERK
Sbjct: 1386 YICERK 1391


>sp|POL_SINV3|POLYPROTEIN invicta virus 3 (SINV-3)

Query: 3 YVCERK 8
Y+CERK
Sbjct: 1386 YICERK 1391


>sp|DPOL_ICHVA|DNA polymerase|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 IIYVCERK 8
++YVC+RK
Sbjct: 468 MMYVCKRK 475


>sp|POLG_PYFV1|GENOME polyprotein|Parsnip yellow fleck virus (isolate

Query: 1 IIYVCERK 8
I+Y+C+R+
Sbjct: 162 IMYLCDRR 169


>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)

Query: 4 VCERKTL 10
VCE+KTL
Sbjct: 360 VCEKKTL 366


>sp|PG164_VACCW|PROTEIN OPG164|Vaccinia virus (strain Western Reserve)

Query: 1 IIYVCERK 8
I+Y+C +K
Sbjct: 21 ILYICRKK 28


>sp|PG164_VACCC|PROTEIN OPG164|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 IIYVCERK 8
I+Y+C +K
Sbjct: 21 ILYICRKK 28


>sp|PCNA_NPVOP|PROBABLE DNA polymerase sliding clamp|Orgyia pseudotsugata multicapsid

Query: 3 YVCERK 8
Y CERK
Sbjct: 59 YACERK 64


>sp|PG164_MONPV|PROTEIN OPG164|Monkeypox virus (MPXV)

Query: 1 IIYVCERK 8
I+Y+C +K
Sbjct: 29 ILYICRKK 36


>sp|PG164_VAR67|PROTEIN OPG164|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 IIYVCERK 8
I+Y+C +K
Sbjct: 21 ILYICRKK 28


>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)

Query: 4 VCERKTL 10
+CE+KTL
Sbjct: 360 ICEKKTL 366


>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)

Query: 4 VCERKTL 10
+CE+KTL
Sbjct: 360 ICEKKTL 366


>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 4 VCERKTL 10
+CE+KTL
Sbjct: 360 ICEKKTL 366




4|SequenceR|25|16|DKSSPIIYVC

>sp|YR751_MIMIV|UNCHARACTERIZED protein R751|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DKSSPIIYVC 10
DK S I+YVC
Sbjct: 23 DKDSEIMYVC 32


>sp|PORTL_BPKMV|PORTAL protein|Pseudomonas phage phiKMV

Query: 4 SPIIYVC 10
SP+ YVC
Sbjct: 385 SPLAYVC 391


>sp|VP3_ROTSH|PROTEIN VP3|Rotavirus A (isolate RVA/Monkey/South

Query: 2 KSSPIIYV 9
KS PIIY+
Sbjct: 277 KSKPIIYM 284


>sp|VP3_ROTS1|PROTEIN VP3|Rotavirus A (strain RVA/SA11-Both/G3P5B[2]) (RV-A)

Query: 2 KSSPIIYV 9
KS PIIY+
Sbjct: 277 KSKPIIYM 284


>sp|DPOL_EHV2|DNA polymerase catalytic subunit|Equine herpesvirus 2 (strain 86/87)

Query: 1 DKSSPIIY 8
DK +PI+Y
Sbjct: 57 DKETPILY 64


>sp|GL_GPCMV|ENVELOPE glycoprotein L|Guinea pig cytomegalovirus (strain 22122)

Query: 5 PIIYVC 10
PIIY C
Sbjct: 140 PIIYTC 145




5|SequenceR|30|21|LCRHPDKSSP

>sp|POLG_HED68|GENOME polyprotein|Human enterovirus D68 (EV68) (EV-68)

Query: 2 CRHPDKSSP 10
CRH D+S P
Sbjct: 923 CRHRDRSYP 931


>sp|ORFC_WDSV|PROTEIN ORF-C|Walleye dermal sarcoma virus (WDSV)

Query: 1 LCRHPDKSSP 10
LCR P+++SP
Sbjct: 58 LCRIPNQNSP 67


>sp|APYC1_BPSBS|ANTI-PYCSAR protein Apyc1|Bacillus phage SBSphiJ

Query: 3 RHPDKSSP 10
R+PD+ SP
Sbjct: 111 RYPDEDSP 118


>sp|VG56_BPT4|DCTP pyrophosphatase|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 CRHPDK 7
C HPDK
Sbjct: 53 CYHPDK 58


>sp|ACPY1_BP010|ANTI-PYCSAR protein Apyc1|Bacillus phage 010DV004

Query: 3 RHPDKSSP 10
R+PD+ SP
Sbjct: 111 RYPDEGSP 118


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 LCRHPD 6
LCRHP+
Sbjct: 1544 LCRHPN 1549


>sp|DNRE_BPT4|DNA replication protein|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 CRHPDK 7
C HPDK
Sbjct: 53 CYHPDK 58


>sp|YL410_MIMIV|PUTATIVE core protein L410|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 RHPDKS 8
RHPD+S
Sbjct: 598 RHPDQS 603


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 2 CRHPDKSS 9
CRH D SS
Sbjct: 1704 CRHTDVSS 1711


>sp|GRAN_GVHB|GRANULIN brillians granulovirus (HbGV)

Query: 1 LCRHPD 6
LC HPD
Sbjct: 144 LCTHPD 149


>sp|V232_FOWPN|PUTATIVE ankyrin repeat protein FPV232|Fowlpox virus (strain NVSL) (FPV)

Query: 1 LCRHPDK 7
+C HP+K
Sbjct: 77 ICSHPNK 83


>sp|GRAN_GVCL|GRANULIN leucotreta granulosis virus (ClGV)

Query: 1 LCRHPD 6
LC HPD
Sbjct: 144 LCAHPD 149


>sp|P69_OYMV|66 kDa protein|Ononis yellow mosaic virus

Query: 2 CRHPD 6
CRHPD
Sbjct: 55 CRHPD 59


>sp|RL12_HCMVM|UNCHARACTERIZED protein RL12|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 HPDKSSP 10
HPD SSP
Sbjct: 256 HPDVSSP 262




6|SequenceR|35|26|IQCGPLCRHP

>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73

Query: 3 CGPLCRH 9
CG +CRH
Sbjct: 406 CGTMCRH 412


>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31

Query: 3 CGPLCRH 9
CG +CRH
Sbjct: 385 CGTMCRH 391


>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34

Query: 3 CGPLCRH 9
CG +CRH
Sbjct: 403 CGTMCRH 409


>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54

Query: 3 CGPLCRH 9
CG +CRH
Sbjct: 388 CGTMCRH 394


>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58

Query: 3 CGPLCRH 9
CG +CRH
Sbjct: 398 CGVMCRH 404


>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42

Query: 3 CGPLCRH 9
CG +CRH
Sbjct: 399 CGVMCRH 405


>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33

Query: 3 CGPLCRH 9
CG +CRH
Sbjct: 398 CGIMCRH 404


>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32

Query: 3 CGPLCRH 9
CG +CRH
Sbjct: 398 CGIMCRH 404


>sp|VE1_HPV53|REPLICATION protein E1|Human papillomavirus type 53

Query: 3 CGPLCRH 9
CG +CRH
Sbjct: 30 CGIMCRH 36


>sp|CAPSD_OUMVV|CAPSID protein|Ourmia melon virus (isolate Melon/Iran/VE9)

Query: 4 GPLCRHP 10
GP+ RHP
Sbjct: 138 GPISRHP 144


>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66

Query: 3 CGPLCRH 9
CG +CRH
Sbjct: 386 CGIMCRH 392


>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30

Query: 3 CGPLCRH 9
CG +CRH
Sbjct: 387 CGIMCRH 393


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 QCGP-LCRHP 10
+C P LCRHP
Sbjct: 1539 RCYPRLCRHP 1548


>sp|RIR2_FRG3G|PUTATIVE ribonucleoside-diphosphate reductase small subunit|Frog virus 3

Query: 2 QCGPLC 7
+CGP+C
Sbjct: 306 ECGPVC 311


>sp|YL280_MIMIV|UNCHARACTERIZED acetyltransferase L280|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 PLCRHP 10
PLCR P
Sbjct: 179 PLCRKP 184


>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11

Query: 3 CGPLCRHP 10
CG +C++P
Sbjct: 222 CGTVCKYP 229


>sp|RDRP_BPMS2|RNA-DIRECTED RNA polymerase beta chain|Escherichia phage MS2 (Bacteriophage MS2)

Query: 2 QCGPLCRH 9
QC P RH
Sbjct: 168 QCAPWIRH 175


>sp|50511_ASFK5|PROTEIN MGF 505-11L|African swine fever virus (isolate

Query: 1 IQCGPLCRH 9
I C PL RH
Sbjct: 330 IDCIPLLRH 338


>sp|RDRP_BPFR|RNA-DIRECTED RNA polymerase beta chain|Enterobacteria phage fr (Bacteriophage

Query: 2 QCGPLCRH 9
QC P RH
Sbjct: 168 QCSPWIRH 175


>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)

Query: 2 QCGPLCRH 9
+CG +C H
Sbjct: 645 RCGEICSH 652


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 4 GPLCR 8
GPLCR
Sbjct: 4365 GPLCR 4369


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 4 GPLCR 8
GPLCR
Sbjct: 4390 GPLCR 4394


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 4 GPLCR 8
GPLCR
Sbjct: 4422 GPLCR 4426


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 4 GPLCR 8
GPLCR
Sbjct: 4433 GPLCR 4437


>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b

Query: 3 CGPLCRHP 10
CG C++P
Sbjct: 221 CGTTCKYP 228


>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a

Query: 3 CGPLCRHP 10
CG C++P
Sbjct: 221 CGTTCKYP 228


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 3 CGPLCRH 9
C P CRH
Sbjct: 918 CCPYCRH 924


>sp|DNBI_SUHV|MAJOR DNA-binding protein|Suid herpesvirus 1 (SuHV-1) (Pseudorabies

Query: 4 GPLCR 8
GPLCR
Sbjct: 229 GPLCR 233


>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33

Query: 3 CGPLCRHP 10
CG C++P
Sbjct: 225 CGSTCKYP 232


>sp|VF407_ASFM2|UNCHARACTERIZED protein B407L|African swine fever virus (isolate

Query: 4 GPLCRH 9
G LCRH
Sbjct: 90 GDLCRH 95




7|SequenceR|40|31|VLQQCIQCGP

>sp|GH_GPCMV|ENVELOPE glycoprotein H|Guinea pig cytomegalovirus (strain 22122)

Query: 2 LQQCIQCGP 10
LQQC GP
Sbjct: 362 LQQCFDVGP 370


>sp|3001L_ASFM2|PROTEIN MGF 300-1L|African swine fever virus (isolate

Query: 2 LQQCIQC 8
L QCIQC
Sbjct: 37 LYQCIQC 43


>sp|VG06B_GAHVM|UNCHARACTERIZED gene 6b protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 5 CIQCGP 10
CI CGP
Sbjct: 26 CIDCGP 31


>sp|VG06A_GAHVM|UNCHARACTERIZED gene 6a protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 5 CIQCGP 10
CI CGP
Sbjct: 18 CIDCGP 23


>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3

Query: 1 VLQQCIQC 8
V++QC QC
Sbjct: 842 VIRQCKQC 849


>sp|IAP2_OSHVF|PUTATIVE apoptosis inhibitor ORF87|Ostreid herpesvirus 1 (isolate France)

Query: 4 QCIQCG 9
QC+ CG
Sbjct: 58 QCVHCG 63


>sp|DPOL_ADEG1|DNA polymerase|Fowl adenovirus A serotype 1

Query: 2 LQQCIQCG 9
+QQC CG
Sbjct: 20 VQQCPTCG 27


>sp|M1249_ASFK5|MINOR capsid protein M1249L|African swine fever virus (isolate

Query: 3 QQCIQCG 9
++CI+CG
Sbjct: 949 KKCIKCG 955


>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 3 QQCIQCG 9
++C QCG
Sbjct: 1780 EECCQCG 1786


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 3 QQCIQCG 9
++C QCG
Sbjct: 1780 EECCQCG 1786


>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)

Query: 2 LQQCIQCG 9
L++C+ CG
Sbjct: 721 LKECLYCG 728


>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 LQQCIQCG 9
L++C+ CG
Sbjct: 721 LKECLYCG 728


>sp|VG45_EHV2|UNCHARACTERIZED gene 45 protein|Equine herpesvirus 2 (strain 86/87)

Query: 2 LQQCIQCGP 10
+ C QC P
Sbjct: 70 FEDCTQCNP 78


>sp|A45_SSV1|UNCHARACTERIZED protein A-45|Sulfolobus spindle-shape virus 1 (SSV1)

Query: 2 LQQCIQCG 9
+ QC++CG
Sbjct: 1 MYQCLRCG 8


>sp|L_TAVCV|RNA-DIRECTED RNA polymerase L|Taro vein chlorosis virus (TAVCV)

Query: 2 LQQCIQC 8
LQ C++C
Sbjct: 1509 LQSCLEC 1515


>sp|POL_JEMBR|GAG-POL polyprotein|Jembrana disease virus (JDV)

Query: 3 QQCIQCG 9
Q+C +CG
Sbjct: 386 QKCFKCG 392


>sp|YR665_MIMIV|UNCHARACTERIZED protein R665|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 LQQCIQCG 9
L QC +CG
Sbjct: 133 LYQCNECG 140


>sp|GH_EHV4|ENVELOPE glycoprotein H|Equine herpesvirus 4 (strain 1942)

Query: 3 QQCIQCG 9
Q C+ CG
Sbjct: 735 QSCVYCG 741


>sp|Y059A_AFV1Y|PUTATIVE zinc finger protein ORF59a|Acidianus filamentous virus 1 (isolate

Query: 4 QCIQCG 9
QC++CG
Sbjct: 12 QCLRCG 17


>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P

Query: 3 QQCIQCG 9
+QC++CG
Sbjct: 199 EQCVECG 205


>sp|GAG_JEMBR|GAG polyprotein|Jembrana disease virus (JDV)

Query: 3 QQCIQCG 9
Q+C +CG
Sbjct: 386 QKCFKCG 392


>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 1 VLQQCIQCG 9
VLQQ +Q G
Sbjct: 167 VLQQALQAG 175




8|SequenceR|45|36|GCFCRVLQQC

>sp|CAPSD_BYVU|CAPSID protein|Beet yellows virus (isolate Ukraine)

Query: 2 CFCRVLQQ 9
CFCR Q+
Sbjct: 115 CFCRTFQK 122


>sp|YORL_TTV1K|UNCHARACTERIZED 26.8 kDa protein|Thermoproteus tenax virus 1 (strain

Query: 2 CFCRVL 7
CFCR L
Sbjct: 227 CFCRAL 232


>sp|SYR_MIMIV|ARGININE--TRNA ligase|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 CRVLQQC 10
CRVL+ C
Sbjct: 173 CRVLEMC 179


>sp|TEG5_BHV1C|TEGUMENT protein UL47|Bovine herpesvirus 1.1 (strain Cooper)

Query: 1 GCFCRVLQQC 10
G CR L++C
Sbjct: 362 GAACRPLRRC 371


>sp|MVP_TAV|MOVEMENT protein|Tomato aspermy virus (TAV)

Query: 2 CFCRVLQQC 10
CF V+++C
Sbjct: 157 CFALVIERC 165




9|SequenceR|50|41|QKVLRGCFCR

>sp|HEPA_GAHVM|DNA helicase/primase complex-associated protein|Gallid herpesvirus 2

Query: 2 KVLRGCFC 9
+++RGC C
Sbjct: 18 QIMRGCIC 25


>sp|RDRP_TMGMV|REPLICASE large subunit|Tobacco mild green mosaic virus

Query: 1 QKVLRGCFC 9
+KV++G FC
Sbjct: 1463 EKVIKGAFC 1471


>sp|POLG_BECN1|GENOME polyprotein|Bovine enteric calicivirus Newbury agent-1

Query: 1 QKVLRGC 7
+KVLRGC
Sbjct: 334 KKVLRGC 340


>sp|POLG_BECNB|GENOME polyprotein|Bovine enteric calicivirus NB (isolate

Query: 1 QKVLRGC 7
+K+LRGC
Sbjct: 334 KKILRGC 340


>sp|TOP2_ASFWA|DNA topoisomerase 2|African swine fever virus (isolate

Query: 1 QKVLRGCF 8
QK L+GC+
Sbjct: 1115 QKALQGCY 1122


>sp|TOP2_ASFP4|DNA topoisomerase 2|African swine fever virus (isolate

Query: 1 QKVLRGCF 8
QK L+GC+
Sbjct: 1115 QKALQGCY 1122


>sp|TOP2_ASFM2|DNA topoisomerase 2|African swine fever virus (isolate

Query: 1 QKVLRGCF 8
QK L+GC+
Sbjct: 1114 QKALQGCY 1121


>sp|TOP2_ASFK5|DNA topoisomerase 2|African swine fever virus (isolate

Query: 1 QKVLRGCF 8
QK L+GC+
Sbjct: 1115 QKALQGCY 1122


>sp|TOP2_ASFB7|DNA topoisomerase 2|African swine fever virus (strain

Query: 1 QKVLRGCF 8
QK L+GC+
Sbjct: 1115 QKALQGCY 1122




10|SequenceR|55|46|TFCAHQKVLR

>sp|RDRP_FXMV|RNA replication protein|Foxtail mosaic virus

Query: 3 CAHQKVLR 10
CAH KVLR
Sbjct: 1313 CAHTKVLR 1320


>sp|VP1_POVLY|MAJOR capsid protein VP1|B-lymphotropic polyomavirus (LPV)

Query: 2 FCAHQKVL 9
FC HQ VL
Sbjct: 355 FCQHQTVL 362


>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 FCAHQKV 8
+C HQK+
Sbjct: 86 YCVHQKI 92


>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 FCAHQKV 8
+C HQK+
Sbjct: 86 YCVHQKI 92


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 FCAHQKV 8
+C HQK+
Sbjct: 86 YCVHQKI 92


>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 FCAHQKV 8
+C HQK+
Sbjct: 86 YCVHQKI 92


>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 FCAHQKV 8
+C HQK+
Sbjct: 85 YCVHQKI 91


>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 FCAHQKV 8
+C HQK+
Sbjct: 86 YCVHQKI 92


>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 FCAHQKV 8
+C HQK+
Sbjct: 86 YCVHQKI 92


>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 FCAHQKV 8
+C HQK+
Sbjct: 86 YCVHQKI 92


>sp|GAG_HV1ET|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 FCAHQKV 8
+C HQK+
Sbjct: 86 YCVHQKI 92


>sp|GAG_HV19N|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2 FCAHQKV 8
+C HQK+
Sbjct: 85 YCVHQKI 91


>sp|DNBI_ALHV1|MAJOR DNA-binding protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 FCAHQK 7
FC HQK
Sbjct: 428 FCQHQK 433


>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain

Query: 4 AHQKVLR 10
AH+KVLR
Sbjct: 16 AHEKVLR 22


>sp|DNBI_SHV21|MAJOR DNA-binding protein|Saimiriine herpesvirus 2 (strain 11)

Query: 2 FCAHQK 7
FC HQK
Sbjct: 426 FCQHQK 431


>sp|VE5_PCPV1|PROBABLE protein E5|Pygmy chimpanzee papillomavirus type 1

Query: 2 FCAHQKVLR 10
FC HQ +L+
Sbjct: 82 FCIHQYILQ 90




11|SequenceR|60|51|MALSATFCAH

>sp|DUT_HHV11|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 1 (strain

Query: 1 MALSATFCA 9
MA+ A FCA
Sbjct: 69 MAMPADFCA 77


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 2 ALSATFCAH 10
ALSA +C H
Sbjct: 2078 ALSAPWCLH 2086


>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)

Query: 1 MALSATFC 8
MAL TFC
Sbjct: 433 MALDCTFC 440


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1 MALSATFCA 9
+ +SATFC+
Sbjct: 265 VVMSATFCS 273


>sp|RPOA_LDVC|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 2 ALSATFCAH 10
ALS FC H
Sbjct: 1762 ALSLFFCVH 1770


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 1 MALSATFCA 9
+ +SATFC+
Sbjct: 265 IVVSATFCS 273




12|SequenceR|65|56|VDSYKMALSA

>sp|VF022_IIV6|PUTATIVE helicase 022L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 VDSYKMAL 8
VDS+KMA+
Sbjct: 968 VDSFKMAI 975




13|SequenceR|70|61|HDGLKVDSYK

>sp|HRF1_NPVLD|HOST range factor 1|Lymantria dispar multicapsid nuclear polyhedrosis

Query: 2 DGLKVDSYK 10
DG +VDSYK
Sbjct: 10 DGERVDSYK 18


>sp|009R_IIV6|UNCHARACTERIZED protein 009R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 HDGLKVDSY 9
H GL V+SY
Sbjct: 53 HKGLNVESY 61


>sp|DPOL1_BPK54|DEPOLYMERASE 1, capsule K8-specific|Klebsiella phage K5-4 (Bacteriophage K5-4)

Query: 2 DGLKVDSY 9
DG++VDS+
Sbjct: 301 DGIRVDSF 308




14|SequenceR|75|66|IAQNFHDGLK

>sp|POL1_RRVC|RNA1 polyprotein|Raspberry ringspot virus (strain cherry)

Query: 1 IAQNFHD 7
IAQ FHD
Sbjct: 1576 IAQEFHD 1582


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 2 AQNFHDGL 9
A+NF DGL
Sbjct: 6369 AKNFSDGL 6376


>sp|YL417_MIMIV|UNCHARACTERIZED protein L417|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 IAQNFHDGL 9
I QNF++GL
Sbjct: 112 ICQNFYNGL 120




15|SequenceR|80|71|VSWEEIAQNF

>sp|ORF2_VZVO|MEMBRANE protein 2|Varicella-zoster virus (strain Oka vaccine)

Query: 3 WEEIAQN 9
WE IAQN
Sbjct: 158 WENIAQN 164


>sp|ORF2_VZVD|MEMBRANE protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3 WEEIAQN 9
WE IAQN
Sbjct: 158 WENIAQN 164


>sp|P32_MCMVK|UNCHARACTERIZED protein p32|Maize chlorotic mottle virus (isolate

Query: 2 SWEEIAQNF 10
SW E+++NF
Sbjct: 69 SWTELSENF 77


>sp|POL_GALV|GAG-POL polyprotein|Gibbon ape leukemia virus (GALV)

Query: 1 VSWEEIAQN 9
V W+++AQN
Sbjct: 83 VVWQDLAQN 91


>sp|GAG_GALV|GAG polyprotein|Gibbon ape leukemia virus (GALV)

Query: 1 VSWEEIAQN 9
V W+++AQN
Sbjct: 83 VVWQDLAQN 91


>sp|RPB1_IIV3|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 3

Query: 1 VSWEEIAQNF 10
V +EEI +NF
Sbjct: 1285 VGFEEIMENF 1294


>sp|X_HBVB3|PROTEIN X|Hepatitis B virus genotype B2

Query: 3 WEEIAQNF 10
WEE+ + F
Sbjct: 120 WEELGEEF 127


>sp|RDRP_MBVLF|RNA-DIRECTED RNA polymerase|Mushroom bacilliform virus (isolate Australia/AUS

Query: 3 WEEIAQNF 10
W+E+A+ F
Sbjct: 87 WDEVAKRF 94


>sp|V16_SPTNK|UNCHARACTERIZED protein V16|Sputnik virophage

Query: 2 SWEEIAQNF 10
S+EE+AQ++
Sbjct: 60 SYEELAQDY 68


>sp|VP4_ROTBS|OUTER capsid protein VP4|Rotavirus C (isolate

Query: 2 SWEEIAQNF 10
+WEE NF
Sbjct: 196 NWEEWTHNF 204




16|SequenceR|85|76|ETHKEVSWEE

>sp|VE6_HPV27|PROTEIN E6|Human papillomavirus 27

Query: 3 HKEVSWEE 10
HK +SWEE
Sbjct: 112 HKPLSWEE 119


>sp|VE6_HPV2A|PROTEIN E6|Human papillomavirus type 2a

Query: 3 HKEVSWEE 10
HK +SWEE
Sbjct: 106 HKPLSWEE 113


>sp|E1B55_ADECT|E1B 55 kDa protein|Canine adenovirus serotype 2 (strain

Query: 2 THKEVSW 8
+H+E SW
Sbjct: 326 SHREASW 332


>sp|LTP_EHV1B|LARGE tegument protein deneddylase|Equine herpesvirus 1 (strain Ab4p)

Query: 2 THKEVSWEE 10
T EVSW+E
Sbjct: 1641 TATEVSWDE 1649


>sp|PG001_VAR67|CHEMOKINE-BINDING protein|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2 THKEVSWEE 10
+HK+VS+E+
Sbjct: 181 SHKKVSYED 189


>sp|PG001_VACCL|CHEMOKINE-BINDING protein|Vaccinia virus (strain Lister) (VACV)

Query: 2 THKEVSWEE 10
+HK+VS+E+
Sbjct: 186 SHKKVSYED 194


>sp|PG001_VACCC|INACTIVE chemokine-binding protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 THKEVSWEE 10
+HK+VS+E+
Sbjct: 172 SHKKVSYED 180


>sp|PG001_VACCW|INACTIVE chemokine-binding protein|Vaccinia virus (strain Western Reserve)

Query: 2 THKEVSWEE 10
+HK+VS+E+
Sbjct: 172 SHKKVSYED 180


>sp|MU1_REOVJ|OUTER capsid protein mu-1|Reovirus type 2 (strain D5/Jones)

Query: 1 ETHKEVSWE 9
+++KE SW+
Sbjct: 385 KSYKETSWD 393


>sp|MU1_REOVD|OUTER capsid protein mu-1|Reovirus type 3 (strain Dearing)

Query: 1 ETHKEVSWE 9
+++KE SW+
Sbjct: 385 KSYKETSWD 393


>sp|MU1_REOVL|OUTER capsid protein mu-1|Reovirus type 1 (strain Lang)

Query: 1 ETHKEVSWE 9
+++KE SW+
Sbjct: 385 KSYKETSWD 393


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 ETHKEVSWEE 10
E EVSWEE
Sbjct: 1399 EKAAEVSWEE 1408


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 ETHKEVSWEE 10
E EVSWEE
Sbjct: 1398 EKAAEVSWEE 1407


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 ETHKEVSWEE 10
E EVSWEE
Sbjct: 1399 EKAAEVSWEE 1408


>sp|LEAD_ADE05|I-LEADER protein|Human adenovirus C serotype 5

Query: 3 HKEVSWE 9
HKE WE
Sbjct: 62 HKEAEWE 68




17|SequenceR|90|81|DTPSQETHKE

>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)

Query: 2 TPSQETHK 9
TPS+E HK
Sbjct: 724 TPSKEDHK 731


>sp|MCE_ASFM2|MRNA-CAPPING enzyme|African swine fever virus (isolate

Query: 1 DTPSQETHK 9
DTP Q+T K
Sbjct: 164 DTPEQQTAK 172


>sp|MCE_ASFK5|MRNA-CAPPING enzyme|African swine fever virus (isolate

Query: 1 DTPSQETHK 9
DTP Q+T K
Sbjct: 164 DTPEQQTAK 172


>sp|DNLI_BPT7|DNA ligase|Escherichia phage T7 (Bacteriophage T7)

Query: 1 DTPSQETHKE 10
DT +QE H+E
Sbjct: 114 DTKNQEFHEE 123




18|SequenceR|95|86|IVGYADTPSQ

>sp|UL95_HHV7J|PROTEIN U67|Human herpesvirus 7 (strain JI)

Query: 1 IVGYADTPS 9
I+ YA+TPS
Sbjct: 142 ILRYAETPS 150


>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)

Query: 3 GYADTP 8
GY DTP
Sbjct: 1451 GYGDTP 1456


>sp|RDRP_GVAIS|RNA replication protein|Grapevine virus A (isolate Is

Query: 3 GYADTP 8
GYA+TP
Sbjct: 833 GYAETP 838


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3 GYADTPS 9
GY DTP+
Sbjct: 6048 GYVDTPN 6054


>sp|MP_WDVS|MOVEMENT protein|Wheat dwarf virus (isolate Sweden)

Query: 2 VGYADTPSQ 10
+GY +TP++
Sbjct: 72 IGYGNTPAR 80




19|SequenceR|100|91|GGQFNIVGYA

>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)

Query: 1 GGQFNIVGYA 10
G FNI GYA
Sbjct: 210 GVPFNIAGYA 219


>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 GGQFNIVGYA 10
G FNI GYA
Sbjct: 210 GVPFNIAGYA 219


>sp|VP03_SHV21|PROBABLE membrane antigen 3|Saimiriine herpesvirus 2 (strain 11)

Query: 2 GQFNIVGYA 10
G FN++GY+
Sbjct: 193 GLFNLLGYS 201


>sp|YR787_MIMIV|PUTATIVE ankyrin repeat protein R787|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 GQFNIVGY 9
G FNIV Y
Sbjct: 226 GHFNIVEY 233


>sp|YR450_MIMIV|UNCHARACTERIZED protein R450|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 GGQFNIVGY 9
GG+ NI+ Y
Sbjct: 284 GGKVNIIDY 292


>sp|YL234_MIMIV|UNCHARACTERIZED protein L234|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 GQFNIVG 8
G+FN++G
Sbjct: 17 GRFNVIG 23




20|SequenceR|105|96|RYSHSGGQFN

>sp|DPOL_BPPRD|DNA-DIRECTED DNA polymerase|Enterobacteria phage PRD1 (Bacteriophage PRD1)

Query: 2 YSHSGGQFN 10
Y+H+GG+F+
Sbjct: 68 YAHNGGKFD 76


>sp|CAPSD_MPRVN|MAJOR inner capsid protein VP3|Micromonas pusilla reovirus (isolate

Query: 2 YSHSGGQFN 10
Y HSG FN
Sbjct: 867 YLHSGETFN 875


>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)

Query: 1 RYSHSGGQ 8
RY H GG+
Sbjct: 1024 RYPHRGGR 1031


>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 RYSHSGGQ 8
RY H GG+
Sbjct: 1024 RYPHRGGR 1031


>sp|DPOL_BPKVM|DNA-DIRECTED DNA polymerase|Vibrio phage KVP40 (isolate Vibrio

Query: 3 SHSGGQF 9
SH GG+F
Sbjct: 367 SHEGGRF 373




21|SequenceR|110|101|RVYKARYSHS

>sp|YR455_MIMIV|UNCHARACTERIZED protein R455|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 RVYKARYSHS 10
R++K RYS S
Sbjct: 113 RIFKLRYSKS 122


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 2 VYKARY 7
+YKARY
Sbjct: 998 IYKARY 1003




22|SequenceR|115|106|TDYSLRVYKA

>sp|RDRP_CPMV1|RNA-DIRECTED RNA polymerase|Cryphonectria parasitica mitovirus 1 (strain

Query: 2 DYSLRVYK 9
D+S+RVYK
Sbjct: 286 DFSVRVYK 293


>sp|BPJ_BPP2|BASEPLATE protein J|Escherichia phage P2 (Bacteriophage P2)

Query: 1 TDYSLRVYKA 10
TDY LR+ +A
Sbjct: 122 TDYRLRIQQA 131


>sp|L_EBLV2|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 2 (strain

Query: 1 TDYSLRVYK 9
TD SLR YK
Sbjct: 66 TDNSLRSYK 74




23|SequenceR|120|111|IVEPKTDYSL

>sp|KITH_GAHVM|THYMIDINE kinase|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 IVEPKTDY 8
I EP+TDY
Sbjct: 248 INEPRTDY 255


>sp|KITH_GAHVR|THYMIDINE kinase|Gallid herpesvirus 2 (strain RB-1b)

Query: 1 IVEPKTDY 8
I EP+TDY
Sbjct: 248 INEPRTDY 255


>sp|PORTL_BPLSK|PROBABLE portal protein|Lactococcus phage SK1 (Lactococcus lactis

Query: 1 IVEPKTDYSL 10
IVE K DYS+
Sbjct: 216 IVELKKDYSV 225


>sp|PORTL_BPLP2|PROBABLE portal protein|Lactococcus phage p2 (Lactococcus lactis

Query: 1 IVEPKTDYSL 10
IVE K DYS+
Sbjct: 216 IVELKKDYSV 225


>sp|A40_VACCC|PROTEIN A40|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 EPKTDYS 9
+PKTDY+
Sbjct: 3 KPKTDYA 9


>sp|GT300_AFV1Y|PUTATIVE glycosyltransferase ORF300|Acidianus filamentous virus 1 (isolate

Query: 4 PKTDYSL 10
PKT YSL
Sbjct: 77 PKTSYSL 83


>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)

Query: 1 IVEPKTDY 8
++EPKT Y
Sbjct: 556 VLEPKTGY 563


>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain

Query: 1 IVEPKTDY 8
++EPKT Y
Sbjct: 556 VLEPKTGY 563


>sp|RDRP_LOLV|RNA-DIRECTED RNA polymerase|Lolium latent virus (isolate Lolium/USA/US1/-)

Query: 1 IVEPKTDYSL 10
I+E KT++SL
Sbjct: 1696 IIEGKTNFSL 1705




24|SequenceR|125|116|LLLQLIVEPK

>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49

Query: 2 LLQLIVEP 9
LLQLI EP
Sbjct: 260 LLQLICEP 267




25|SequenceR|130|121|MQWEKLLLQL

>sp|YL798_MIMIV|UNCHARACTERIZED protein L798|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 MQWEKLLLQ 9
++WEK +LQ
Sbjct: 178 IRWEKYILQ 186


>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)

Query: 1 MQWEKLLLQL 10
+QW +LQL
Sbjct: 6 LQWSSYVLQL 15


>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 MQWEKLLLQL 10
+QW +LQL
Sbjct: 6 LQWSSYVLQL 15


>sp|POL1_BAMMN|GENOME polyprotein 1|Barley mild mosaic virus (strain

Query: 2 QWEKLLL 8
+WEKLL+
Sbjct: 2108 KWEKLLI 2114


>sp|VG15_BPPH8|REPLICATION protein 15|Enterobacteria phage phi80 (Bacteriophage phi-80)

Query: 2 QWEKLLLQ 9
QW+KL +Q
Sbjct: 268 QWDKLTMQ 275


>sp|YL504_MIMIV|UNCHARACTERIZED protein L504|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 QWEKLL 7
QWEKL+
Sbjct: 364 QWEKLI 369




26|SequenceR|135|126|LKPLEMQWEK

>sp|MATA_BPGA|MATURATION protein A|Enterobacteria phage GA (Bacteriophage GA)

Query: 1 LKPLEMQWEK 10
L PLE+ WEK
Sbjct: 281 LNPLEIYWEK 290


>sp|YL576_MIMIV|UNCHARACTERIZED protein L576|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 LEMQWE 9
LEM+WE
Sbjct: 227 LEMEWE 232


>sp|RDRP_SCVLB|PROBABLE RNA-directed RNA polymerase|Saccharomyces cerevisiae virus L-BC

Query: 2 KPLEMQWEK 10
+P+ M+W++
Sbjct: 1003 RPMRMKWQE 1011


>sp|VF161_IIV3|PUTATIVE helicase 109L|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 KPLEMQWEK 10
KPL QWE+
Sbjct: 146 KPLLAQWEQ 154


>sp|UL88_HHV6Z|PROTEIN U59|Human herpesvirus 6B (strain Z29)

Query: 3 PLEMQWE 9
PLE++W+
Sbjct: 115 PLELKWK 121


>sp|TIPJ_BPS27|TIP attachment protein J|Escherichia phage SECphi27

Query: 5 EMQWEK 10
EMQW K
Sbjct: 663 EMQWRK 668


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 1 LKPLEMQWE 9
LKPL+ WE
Sbjct: 1333 LKPLKGDWE 1341


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 LKPLEMQWE 9
L+PL QW+
Sbjct: 1609 LQPLVQQWK 1617


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 LKPLEMQWE 9
L+PL QW+
Sbjct: 1616 LQPLVQQWK 1624


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 LKPLEMQWE 9
L+PL QW+
Sbjct: 1609 LQPLVQQWK 1617


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 LKPLEMQWE 9
L+PL QW+
Sbjct: 1616 LQPLVQQWK 1624


>sp|MATA2_BPSP|MATURATION protein A2|Enterobacteria phage SP (Bacteriophage SP)

Query: 1 LKPLEMQWE 9
L P E+ WE
Sbjct: 333 LNPAEVAWE 341


>sp|RDRP_LRVLG|PROBABLE RNA-directed RNA polymerase|Leishmania RNA virus 1 -

Query: 1 LKPLEMQWE 9
L+P+E WE
Sbjct: 419 LRPVERIWE 427


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 2 KPLEMQWE 9
+P+E+ WE
Sbjct: 1828 EPVELPWE 1835


>sp|MATA_BPMS2|MATURATION protein A|Escherichia phage MS2 (Bacteriophage MS2)

Query: 1 LKPLEMQWEK 10
L PL + WEK
Sbjct: 281 LNPLGIVWEK 290


>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)

Query: 2 KPLEMQWE 9
+P+E+ WE
Sbjct: 497 EPVELPWE 504


>sp|MATA_BPFR|MATURATION protein A|Enterobacteria phage fr (Bacteriophage fr)

Query: 1 LKPLEMQWEK 10
L PL + WEK
Sbjct: 281 LNPLGIVWEK 290


>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 1 LKPLEMQWEK 10
LKP E WE
Sbjct: 1343 LKPAEGNWES 1352


>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 1 LKPLEMQWEK 10
LKP E WE
Sbjct: 1343 LKPAEGNWES 1352


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 1 LKPLEMQWE 9
LKP+E W+
Sbjct: 1333 LKPVEGDWD 1341




27|SequenceR|140|131|HVSIVLKPLE

>sp|UL20_HHV2H|PROTEIN UL20|Human herpesvirus 2 (strain HG52)

Query: 4 IVLKPLE 10
+VLKPLE
Sbjct: 72 LVLKPLE 78


>sp|UL20_HHV11|PROTEIN UL20|Human herpesvirus 1 (strain 17)

Query: 4 IVLKPLE 10
+VLKPLE
Sbjct: 72 LVLKPLE 78


>sp|CAPSD_SFAVA|MAJOR capsid protein|Spodoptera frugiperda ascovirus 1a (SfAV-1a)

Query: 1 HVSIVLKPLE 10
++S+VL+P E
Sbjct: 413 NISVVLRPSE 422


>sp|NS49_CVBQ|NON-STRUCTURAL protein of 4.9 kDa|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 HVSIVLKPLE 10
HV ++++P+E
Sbjct: 21 HVKLIIRPIE 30


>sp|NS49_CVBM|NON-STRUCTURAL protein of 4.9 kDa|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 HVSIVLKPLE 10
HV ++++P+E
Sbjct: 21 HVKLIIRPIE 30




28|SequenceR|145|136|KQMGGHVSIV

>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain

Query: 2 QMGGHVS 8
+MGGH+S
Sbjct: 543 EMGGHLS 549


>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain

Query: 2 QMGGHVS 8
+MGGH+S
Sbjct: 543 EMGGHLS 549


>sp|YR787_MIMIV|PUTATIVE ankyrin repeat protein R787|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 MGGHVSIV 10
+GGH+ IV
Sbjct: 195 IGGHIDIV 202


>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 2 QMGGHVSI 9
Q G HVSI
Sbjct: 1461 QFGSHVSI 1468


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 2 QMGGHVSI 9
Q G HVSI
Sbjct: 1461 QFGSHVSI 1468


>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse

Query: 1 KQMGGHVSIV 10
K +GGH++++
Sbjct: 83 KIVGGHINVI 92


>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United

Query: 1 KQMGGHVSIV 10
K +GGH++++
Sbjct: 83 KIVGGHINVI 92


>sp|CAPSD_BPG4|CAPSID protein F|Escherichia phage G4 (Bacteriophage G4)

Query: 1 KQMGGHVS 8
K+ GGH S
Sbjct: 221 KEFGGHTS 228


>sp|YL095_MIMIV|UNCHARACTERIZED protein L95|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 MGGHVSIV 10
MGGHV ++
Sbjct: 1 MGGHVDVL 8


>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare

Query: 1 KQMGGHVSIV 10
K GGH++++
Sbjct: 83 KITGGHINVI 92




29|SequenceR|150|141|PHLEFKQMGG

>sp|CVC2_PSHV1|CAPSID vertex component 2|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 PHLEFKQMGG 10
P L+F Q+GG
Sbjct: 7 PPLKFGQIGG 16


>sp|VF329_IIV6|UNCHARACTERIZED protein 329R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 PHLEFKQM 8
PH++FK +
Sbjct: 258 PHMQFKNL 265


>sp|TRX1_GAHVM|TRIPLEX capsid protein 1|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 PHLEFKQMGG 10
PH F+ +GG
Sbjct: 245 PHRHFQLLGG 254


>sp|EXON_IIV6|PUTATIVE exonuclease 012L|Invertebrate iridescent virus 6 (IIV-6)

Query: 3 LEFKQMGG 10
+ FKQ+GG
Sbjct: 459 MSFKQIGG 466


>sp|UL24_EHV2|PROTEIN UL24 homolog|Equine herpesvirus 2 (strain 86/87)

Query: 1 PHLEFKQMGG 10
PHL FK G
Sbjct: 139 PHLIFKSQRG 148




30|SequenceR|155|146|LQKIRPHLEF

>sp|L_BDV1|RNA-DIRECTED RNA polymerase L|Borna disease virus 1 (BoDV-1)

Query: 4 IRPHLE 9
IRPHLE
Sbjct: 1622 IRPHLE 1627


>sp|L_BDVV|RNA-DIRECTED RNA polymerase L|Borna disease virus (strain V)

Query: 4 IRPHLE 9
IRPHLE
Sbjct: 1622 IRPHLE 1627


>sp|VF439_IIV3|PROBABLE kinase 098L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 LQKIRPHLEF 10
L+++RP LE+
Sbjct: 19 LREVRPFLEY 28




31|SequenceR|160|151|LGKGLLQKIR

>sp|NEC2_EHV1V|NUCLEAR egress protein 2|Equine herpesvirus 1 (strain V592)

Query: 1 LGKGLLQKIR 10
+G GLLQ+IR
Sbjct: 11 VGGGLLQRIR 20


>sp|NEC2_EHV1B|NUCLEAR egress protein 2|Equine herpesvirus 1 (strain Ab4p)

Query: 1 LGKGLLQKIR 10
+G GLLQ+IR
Sbjct: 11 VGGGLLQRIR 20


>sp|POL_AVIRE|GAG-POL polyprotein|Avian reticuloendotheliosis virus

Query: 1 LGKGLLQKIR 10
LG+ LLQK+R
Sbjct: 48 LGRDLLQKLR 57


>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)

Query: 1 LGKGLLQKI 9
LG+G++QKI
Sbjct: 304 LGRGVMQKI 312


>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 LGKGLLQKI 9
LG+G++QKI
Sbjct: 304 LGRGVMQKI 312


>sp|PKG1_ADEM1|PACKAGING protein 1|Murine adenovirus A serotype 1

Query: 2 GKGLLQKIR 10
GKGLLQ+++
Sbjct: 121 GKGLLQELK 129


>sp|UL25_HHV6G|VIRION-PACKAGING protein UL25 homolog|Human herpesvirus 6A (strain GS)

Query: 1 LGKGLLQKI 9
LG+G++QKI
Sbjct: 304 LGRGVMQKI 312


>sp|MVP_BYDVN|MOVEMENT protein|Cereal yellow dwarf virus (isolate

Query: 1 LGKGLLQK 8
LG+GLLQ+
Sbjct: 13 LGEGLLQE 20


>sp|GAG_SIVGB|GAG polyprotein|Simian immunodeficiency virus (isolate GB1)

Query: 1 LGKGLLQKIR 10
LG+GL QK++
Sbjct: 474 LGRGLRQKMK 483


>sp|TIPJ_LAMBD|TIP attachment protein J|Escherichia phage lambda (Bacteriophage

Query: 1 LGKGLLQKI 9
LGK LL+K+
Sbjct: 827 LGKELLEKV 835




32|SequenceR|165|156|VAAKILGKGL

>sp|R1AB_LIYV9|REPLICASE polyprotein 1ab|Lettuce infectious yellows virus (isolate

Query: 1 VAAKILGKG 9
V +KILGKG
Sbjct: 1952 VVSKILGKG 1960


>sp|DNBI_PSHV1|MAJOR DNA-binding protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 VAAKILGKGL 10
VA ++LG+GL
Sbjct: 1072 VALRVLGEGL 1081


>sp|L_OLVVA|RNA-DIRECTED RNA polymerase L|Oliveros mammarenavirus (isolate

Query: 4 KILGKGL 10
K+LGKGL
Sbjct: 756 KLLGKGL 762




33|SequenceR|170|161|WAGTTVAAKI

>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 WAGTTVA 7
WAGTTVA
Sbjct: 289 WAGTTVA 295


>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 WAGTTVA 7
WAGTTVA
Sbjct: 289 WAGTTVA 295


>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 WAGTTVA 7
WAGTTVA
Sbjct: 289 WAGTTVA 295


>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 WAGTTVA 7
WAGTTVA
Sbjct: 289 WAGTTVA 295


>sp|MYC_FLVTT|VIRAL myc transforming protein|Feline leukemia virus FTT

Query: 1 WAGTTVAAKI 10
W+G + AAK+
Sbjct: 135 WSGFSAAAKL 144


>sp|MYC_FLV|VIRAL myc transforming protein|Feline leukemia virus

Query: 1 WAGTTVAAKI 10
W+G + AAK+
Sbjct: 135 WSGFSAAAKL 144


>sp|MYC_AVIOK|VIRAL myc transforming protein|Avian retrovirus OK10

Query: 1 WAGTTVAAKI 10
W+G + AAK+
Sbjct: 121 WSGFSAAAKL 130


>sp|MYC_AVIMH|VIRAL myc transforming protein|Avian retrovirus MH2

Query: 1 WAGTTVAAKI 10
W+G + AAK+
Sbjct: 121 WSGFSAAAKL 130


>sp|MYC_AVIME|VIRAL myc transforming protein|Avian retrovirus MH2E21

Query: 1 WAGTTVAAKI 10
W+G + AAK+
Sbjct: 121 WSGFSAAAKL 130


>sp|MYC_AVIMD|VIRAL myc transforming protein|Avian myelocytomatosis virus HBI

Query: 1 WAGTTVAAKI 10
W+G + AAK+
Sbjct: 121 WSGFSAAAKL 130


>sp|MYC_AVIMC|VIRAL myc transforming protein|Avian myelocytomatosis virus 29 (Avian

Query: 1 WAGTTVAAKI 10
W+G + AAK+
Sbjct: 121 WSGFSAAAKL 130


>sp|MYC_AVIM2|VIRAL myc transforming protein|Avian myelocytomatosis virus CMII

Query: 1 WAGTTVAAKI 10
W+G + AAK+
Sbjct: 121 WSGFSAAAKL 130




34|SequenceR|175|166|GGTLIWAGTT

>sp|NEF_SIVGB|PROTEIN Nef|Simian immunodeficiency virus (isolate GB1)

Query: 1 GGTLIWAGT 9
G TL+W+GT
Sbjct: 197 GETLMWSGT 205


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 1 GGTLIWAG 8
GGT+IW G
Sbjct: 1160 GGTVIWGG 1167


>sp|GLYCO_NCMV|GLYCOPROTEIN cereal mosaic virus (NCMV)

Query: 2 GTLIWA 7
GTL+WA
Sbjct: 331 GTLVWA 336


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 2 GTLIWAGT 9
GTL +AGT
Sbjct: 847 GTLFFAGT 854


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 2 GTLIWAGT 9
GTL +AGT
Sbjct: 847 GTLFFAGT 854


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b

Query: 2 GTLIWAGT 9
GTL +AGT
Sbjct: 847 GTLFFAGT 854


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 2 GTLIWAGT 9
GTL +AGT
Sbjct: 845 GTLFFAGT 852


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 2 GTLIWAGT 9
GTL +AGT
Sbjct: 847 GTLFFAGT 854


>sp|RDRP_TYYVF|PROTEIN P1-P2|Turnip yellows virus (isolate FL-1)

Query: 1 GGTLIW 6
GGTL W
Sbjct: 657 GGTLTW 662


>sp|GB_SUHVF|ENVELOPE glycoprotein B|Suid herpesvirus 1 (strain Indiana-Funkhauser

Query: 3 TLIWAGTT 10
T +W+G+T
Sbjct: 181 TTVWSGST 188


>sp|YR816_MIMIV|UNCHARACTERIZED protein R816|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 TLIWAGTT 10
+++W GTT
Sbjct: 124 SILWIGTT 131




35|SequenceR|180|171|VGTNVGGTLI

>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)

Query: 1 VGTNVGGT 8
+GT VGGT
Sbjct: 96 LGTEVGGT 103


>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P

Query: 2 GTNVGGTLI 10
GT+VGG L+
Sbjct: 272 GTHVGGILL 280


>sp|011L_IIV3|UNCHARACTERIZED protein 011L|Invertebrate iridescent virus 3 (IIV-3)

Query: 3 TNVGGTLI 10
TN+GGT I
Sbjct: 15 TNLGGTCI 22


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 1 VGTNVG 6
VGTNVG
Sbjct: 390 VGTNVG 395


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 1 VGTNVGG 7
VGT++GG
Sbjct: 6372 VGTDIGG 6378


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 1 VGTNVGG 7
VGT++GG
Sbjct: 6496 VGTDIGG 6502


>sp|FUS_CDVO|FUSION glycoprotein F0|Canine distemper virus (strain Onderstepoort)

Query: 1 VGTNVGGTL 9
VGTN+G L
Sbjct: 571 VGTNLGNAL 579


>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)

Query: 3 TNVGGTLI 10
TN GGT++
Sbjct: 68 TNFGGTIL 75


>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 TNVGGTLI 10
TN GGT++
Sbjct: 68 TNFGGTIL 75




36|SequenceR|185|176|GVHKAVGTNV

>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 HKAVGT 8
HKAVGT
Sbjct: 561 HKAVGT 566


>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 HKAVGT 8
HKA+GT
Sbjct: 558 HKAIGT 563


>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 HKAVGT 8
HKA+GT
Sbjct: 557 HKAIGT 562


>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 HKAVGT 8
HKA+GT
Sbjct: 551 HKAIGT 556


>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 HKAVGT 8
HKA+GT
Sbjct: 558 HKAIGT 563


>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 HKAVGT 8
HKA+GT
Sbjct: 556 HKAIGT 561


>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 HKAVGT 8
HKA+GT
Sbjct: 557 HKAIGT 562


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 HKAVGT 8
HKA+GT
Sbjct: 563 HKAIGT 568


>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 HKAVGT 8
HKA+GT
Sbjct: 557 HKAIGT 562


>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 HKAVGT 8
HKA+GT
Sbjct: 557 HKAIGT 562


>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 HKAVGT 8
HKA+GT
Sbjct: 569 HKAIGT 574


>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 HKAVGT 8
HKA+GT
Sbjct: 569 HKAIGT 574


>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 HKAVGT 8
HKA+GT
Sbjct: 569 HKAIGT 574


>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 HKAVGT 8
HKA+GT
Sbjct: 559 HKAIGT 564


>sp|SPIKE_PEDV7|SPIKE glycoprotein|Porcine epidemic diarrhea virus (strain

Query: 2 VHKAVGTNV 10
+H A+GTN+
Sbjct: 334 LHTALGTNL 342


>sp|RFCL_MIMIV|PUTATIVE replication factor C large|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 GVHKAVGT 8
G++KA GT
Sbjct: 321 GIYKATGT 328


>sp|V231_FOWPN|PUTATIVE ankyrin repeat protein FPV231|Fowlpox virus (strain NVSL) (FPV)

Query: 2 VHKAVGTN 9
+HKA+G N
Sbjct: 62 LHKAIGNN 69




37|SequenceR|190|181|EKLADGVHKA

>sp|TAP51_BPT4|BASEPLATE hub assembly protein gp51|Enterobacteria phage T4 (Bacteriophage

Query: 2 KLADGVHK 9
KL DGVH+
Sbjct: 8 KLPDGVHR 15


>sp|ENV_FFV|ENVELOPE glycoprotein gp130|Feline foamy virus (FFV) (Feline

Query: 1 EKLADGVH 8
+KLA GVH
Sbjct: 596 QKLAKGVH 603


>sp|YL268_MIMIV|PUTATIVE serine/threonine-protein kinase L268|Acanthamoeba polyphaga

Query: 1 EKLADGVHK 9
EK+ADG+ K
Sbjct: 154 EKIADGIIK 162


>sp|YL829_MIMIV|UNCHARACTERIZED protein L829|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 KLADGVHKA 10
KLA G+HK
Sbjct: 262 KLAIGIHKG 270


>sp|VP2_POVWU|MINOR capsid protein VP2|WU polyomavirus (WUPyV)

Query: 3 LADGVHK 9
L+DGVH+
Sbjct: 311 LSDGVHR 317




38|SequenceR|195|186|SRSAHEKLAD

***** No hits found ******


39|SequenceR|200|191|CIKRSSRSAH

>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 1 CIKRSSRSA 9
C K SSRSA
Sbjct: 897 CSKASSRSA 905




40|SequenceR|205|196|AIGITCIKRS

>sp|VE2_BPV6|REGULATORY protein E2|Bos taurus papillomavirus 6 (Bovine

Query: 3 GITCIKRS 10
G+TC+K S
Sbjct: 424 GVTCVKGS 431


>sp|VE2_BPV3|REGULATORY protein E2|Bovine papillomavirus type 3

Query: 3 GITCIKRS 10
G+TC+K S
Sbjct: 403 GVTCLKGS 410


>sp|VE8E2_BPV3|PROTEIN E8^E2C|Bovine papillomavirus type 3

Query: 3 GITCIKRS 10
G+TC+K S
Sbjct: 209 GVTCLKGS 216


>sp|D9_RFVKA|MRNA-DECAPPING protein D9|Rabbit fibroma virus (strain Kasza)

Query: 1 AIGITCIK 8
+IG TC+K
Sbjct: 132 SIGTTCVK 139




41|SequenceR|210|201|IVGWPAIGIT

>sp|NEF_HV1VI|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 IVGWPAIG 8
IVGWPA+G
Sbjct: 10 IVGWPAVG 17


>sp|NEF_HV196|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 IVGWPAI 7
IVGWPAI
Sbjct: 10 IVGWPAI 16


>sp|NEF_HV1M2|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 IVGWPAI 7
IVGWPAI
Sbjct: 10 IVGWPAI 16


>sp|NEF_HV1Z6|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 IVGWPAI 7
IVGWPAI
Sbjct: 10 IVGWPAI 16


>sp|NEF_HV193|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 IVGWPAI 7
IVGWPAI
Sbjct: 10 IVGWPAI 16


>sp|NEF_HV1EL|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 IVGWPAI 7
IVGWPAI
Sbjct: 10 IVGWPAI 16


>sp|NEF_HV1Z2|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 IVGWPAI 7
IVGWPAI
Sbjct: 10 IVGWPAI 16


>sp|NEF_HV1ND|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 IVGWPAI 7
+VGWPAI
Sbjct: 10 LVGWPAI 16


>sp|NEF_HV1B8|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 IVGWPAI 7
+VGWPA+
Sbjct: 10 VVGWPAV 16


>sp|NEF_HV1LA|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 IVGWPAI 7
+VGWPA+
Sbjct: 10 VVGWPAV 16


>sp|NEF_HV1H3|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 IVGWPAI 7
+VGWPA+
Sbjct: 10 VVGWPAV 16


>sp|NEF_HV112|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 IVGWPAI 7
+VGWPA+
Sbjct: 10 VVGWPAV 16


>sp|NEF_HV1ET|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 2 VGWPAI 7
VGWPAI
Sbjct: 11 VGWPAI 16


>sp|NEF_HV1B1|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 IVGWPAI 7
++GWPA+
Sbjct: 10 VIGWPAV 16


>sp|NEF_HV19N|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 IVGWPAI 7
IVGWP I
Sbjct: 10 IVGWPQI 16


>sp|NSS_SFTSV|NON-STRUCTURAL protein NS-S|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)

Query: 4 WPAIG 8
WPAIG
Sbjct: 283 WPAIG 287


>sp|NEF_HV1SE|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 IVGWPAI 7
IVGWP +
Sbjct: 10 IVGWPEV 16


>sp|NEF_HV1MA|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 IVGWPAI 7
IVGWP I
Sbjct: 10 IVGWPKI 16


>sp|NEF_HV1MP|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 IVGWPAI 7
IVGWP +
Sbjct: 10 IVGWPNV 16


>sp|NEF_HV1SC|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 IVGWPAI 7
+VGWP +
Sbjct: 10 VVGWPTV 16


>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)

Query: 1 IVGWPAI 7
++GWP I
Sbjct: 754 LIGWPII 760


>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 IVGWPAI 7
++GWP I
Sbjct: 754 LIGWPII 760


>sp|NEF_HV1V9|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 IVGWPAI 7
I GWPA+
Sbjct: 10 ISGWPAV 16


>sp|NEF_HV1BR|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 IVGWPAI 7
+VGWP +
Sbjct: 10 VVGWPTV 16


>sp|HEPA_EHV1V|DNA helicase/primase complex-associated protein|Equine herpesvirus 1

Query: 4 WPAIGIT 10
WPA+G++
Sbjct: 316 WPALGMS 322


>sp|HEPA_EHV1B|DNA helicase/primase complex-associated protein|Equine herpesvirus 1

Query: 4 WPAIGIT 10
WPA+G++
Sbjct: 316 WPALGMS 322


>sp|NEF_HV1J3|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 IVGWPAI 7
+VGWPA+
Sbjct: 10 VVGWPAV 16


>sp|NEF_SIVCZ|PROTEIN Nef|Simian immunodeficiency virus (isolate CPZ

Query: 1 IVGWPAI 7
+VGWP +
Sbjct: 10 LVGWPEV 16


>sp|NEF_HV1YB|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 IVGWPAI 7
+VGWP I
Sbjct: 10 LVGWPEI 16


>sp|NEF_HV1S3|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 2 VGWPAI 7
+GWPA+
Sbjct: 10 MGWPAV 15


>sp|NEF_HV1YF|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 IVGWPAI 7
+VGWP I
Sbjct: 10 LVGWPEI 16


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 1 IVGWPA 6
+VGWPA
Sbjct: 1116 LVGWPA 1121


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 IVGWPA 6
+VGWPA
Sbjct: 1114 LVGWPA 1119


>sp|NEF_HV1LW|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 IVGWPAI 7
++GWP +
Sbjct: 10 VIGWPTV 16


>sp|NEF_HV1H2|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 IVGWPAI 7
++GWP +
Sbjct: 10 VIGWPTV 16


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 1 IVGWPA 6
+VGWPA
Sbjct: 1109 LVGWPA 1114


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 IVGWPA 6
+VGWPA
Sbjct: 1108 LVGWPA 1113


>sp|NEF_SIVMB|PROTEIN Nef|Simian immunodeficiency virus (isolate MB66)

Query: 1 IVGWPAI 7
+VGWP +
Sbjct: 10 LVGWPEV 16


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 IVGWPA 6
+VGWPA
Sbjct: 1114 LVGWPA 1119


>sp|YR818_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R818|Acanthamoeba

Query: 4 WPAIGIT 10
WP GIT
Sbjct: 566 WPYFGIT 572


>sp|NEF_HV1RH|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 3 GWPAI 7
GWPA+
Sbjct: 12 GWPAV 16


>sp|NEF_SIVEK|PROTEIN Nef|Simian immunodeficiency virus (isolate EK505)

Query: 1 IVGWPAI 7
+VGWP +
Sbjct: 10 LVGWPQV 16


>sp|NEF_HV1ZH|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 3 GWPAI 7
GWPA+
Sbjct: 8 GWPAV 12


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 1 IVGWPA 6
+VGWPA
Sbjct: 1113 LVGWPA 1118


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1 IVGWPA 6
+VGWPA
Sbjct: 1108 LVGWPA 1113


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1 IVGWPA 6
+VGWPA
Sbjct: 1108 LVGWPA 1113


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 1 IVGWPA 6
+VGWPA
Sbjct: 1110 LVGWPA 1115


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 IVGWPA 6
+VGWPA
Sbjct: 1108 LVGWPA 1113


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1 IVGWPA 6
+VGWPA
Sbjct: 1108 LVGWPA 1113


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 1 IVGWPA 6
+VGWPA
Sbjct: 1108 LVGWPA 1113


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1 IVGWPA 6
+VGWPA
Sbjct: 1108 LVGWPA 1113




42|SequenceR|215|206|DNRNEIVGWP

>sp|E4RF4_ADE02|EARLY 4 ORF4 protein|Human adenovirus C serotype 2

Query: 1 DNRNEIVGW 9
D++NE VGW
Sbjct: 13 DSQNECVGW 21


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 1 DNRNEIVGWP 10
DNR ++ G+P
Sbjct: 409 DNRRQVFGFP 418


>sp|ORF3_TTVD1|UNCHARACTERIZED ORF3 protein|Torque teno tupaia virus (isolate

Query: 3 RNEIVGWP 10
RN + GWP
Sbjct: 25 RNHLPGWP 32


>sp|P9_RGDV|MINOR outer capsid protein P9|Rice gall dwarf virus (RGDV)

Query: 1 DNRNEIVG 8
+NR EIVG
Sbjct: 31 NNRREIVG 38


>sp|AC11_NPVAC|PROTEIN AC11|Autographa californica nuclear polyhedrosis virus

Query: 4 NEIVGW 9
N++VGW
Sbjct: 165 NDVVGW 170


>sp|Y091_OSHVF|UNCHARACTERIZED protein ORF91|Ostreid herpesvirus 1 (isolate France)

Query: 1 DNRNEIVG 8
DNR+ +VG
Sbjct: 254 DNRSRVVG 261


>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30

Query: 1 DNRNEIVGW 9
DNR E V W
Sbjct: 126 DNRTEYVVW 134


>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 1 DNRNEIVGWP 10
D+R E +G+P
Sbjct: 592 DDRGENIGFP 601


>sp|VE2_HPV53|REGULATORY protein E2|Human papillomavirus type 53

Query: 1 DNRNEIVGW 9
DNR E V W
Sbjct: 126 DNRAEYVVW 134


>sp|VE2_HPV13|REGULATORY protein E2|Human papillomavirus 13

Query: 1 DNRNEIVGW 9
DNR + V W
Sbjct: 126 DNRMDYVSW 134


>sp|DEPOL_BPK56|DEPOLYMERASE, capsule KL47-specific|Klebsiella phage P560 (Bacteriophage P560)

Query: 2 NRNEIVG 8
N NEIVG
Sbjct: 616 NNNEIVG 622


>sp|GLYCO_MMVR|GLYCOPROTEIN mosaic virus (isolate Maize/United

Query: 3 RNEIVGW 9
RN+ VGW
Sbjct: 87 RNDSVGW 93




43|SequenceR|220|211|DRGVLDNRNE

>sp|POLG_SPMMV|GENOME polyprotein|Sweet potato mild mottle virus

Query: 1 DRGVLDNRNE 10
D VLDN+N+
Sbjct: 114 DDNVLDNKND 123




44|SequenceR|225|216|YPAVVDRGVL

>sp|NCAP_KHUV|NUCLEOPROTEIN virus (KHUV)

Query: 1 YPAVVDR 7
YPA+VDR
Sbjct: 30 YPAIVDR 36


>sp|L_LATVB|RNA-DIRECTED RNA polymerase L|Latino mammarenavirus (isolate Rat/Bolivia/MARU

Query: 2 PAVVDRGVL 10
P V+DRGV+
Sbjct: 2107 PLVLDRGVI 2115


>sp|MATRX_CHAV|MATRIX protein|Chandipura virus (strain I653514) (CHPV)

Query: 2 PAVVDRGVL 10
P ++DRGV+
Sbjct: 124 PGILDRGVV 132


>sp|VG58_EHV2|GENE 58 protein|Equine herpesvirus 2 (strain 86/87)

Query: 2 PAVVDRGVL 10
P+V+DR VL
Sbjct: 3 PSVMDRAVL 11


>sp|CAP3_ADEB3|PRE-HEXON-LINKING protein IIIa|Bovine adenovirus B serotype 3

Query: 2 PAVVDRG 8
PAVV+RG
Sbjct: 172 PAVVERG 178


>sp|CAPSP_ADEGX|PENTON protein|Fowl adenovirus C serotype 10

Query: 2 PAVVDRGVL 10
PAVV +GVL
Sbjct: 474 PAVVQQGVL 482


>sp|CAPSP_ADEG1|PENTON protein|Fowl adenovirus A serotype 1

Query: 2 PAVVDRGVL 10
PAVV +GVL
Sbjct: 464 PAVVQQGVL 472


>sp|YR481_MIMIV|UNCHARACTERIZED protein R481|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 YPAVVD 6
YPA+VD
Sbjct: 282 YPAIVD 287


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 1 YPAVVDRGVL 10
YP V+D G +
Sbjct: 2763 YPGVLDAGFI 2772




45|SequenceR|230|221|NLLTQYPAVV

>sp|RDRP_SBMVA|REPLICASE polyprotein P2AB|Southern bean mosaic virus (isolate

Query: 1 NLLTQYPA 8
NLL +YPA
Sbjct: 514 NLLERYPA 521


>sp|TGB1_FXMV|MOVEMENT and silencing protein TGBp1|Foxtail mosaic virus

Query: 1 NLLTQYPA 8
N+L +YPA
Sbjct: 80 NILDEYPA 87




46|SequenceR|235|226|LKSLPNLLTQ

>sp|GP_BUNGE|ENVELOPMENT polyprotein|Bunyavirus germiston

Query: 1 LKSLPNLL 8
+KSLPNL+
Sbjct: 1137 IKSLPNLV 1144




47|SequenceR|240|231|NNLVNLKSLP

>sp|PG172_MONPV|PROTEIN OPG172|Monkeypox virus (MPXV)

Query: 1 NNLVNLKSLP 10
NN+VN+K +P
Sbjct: 46 NNVVNIKYIP 55


>sp|GSTB_BPT4|DNA beta-glucosyltransferase|Enterobacteria phage T4 (Bacteriophage

Query: 1 NNLVNLKSLP 10
NN++N K++P
Sbjct: 10 NNVINFKTVP 19


>sp|Y014_AMEPV|UNCHARACTERIZED leucine-rich repeat-containing protein AMV014/Q3|Amsacta moorei

Query: 1 NNLVNLKSL 9
NNLVNLK L
Sbjct: 122 NNLVNLKKL 130


>sp|PG172_VARV|PROTEIN A43|Variola virus

Query: 1 NNLVNLKSLP 10
NN+VN+K +P
Sbjct: 46 NNVVNIKYIP 55


>sp|PG172_VAR67|PROTEIN A43|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 NNLVNLKSLP 10
NN+VN+K +P
Sbjct: 46 NNVVNIKYIP 55


>sp|NCAP_MOPEI|NUCLEOPROTEIN virus (MOPV)

Query: 1 NNLVNLKSL 9
NNLV LKS+
Sbjct: 75 NNLVELKSV 83


>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 1 NNLVNLKS 8
NNLV LKS
Sbjct: 75 NNLVELKS 82


>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)

Query: 1 NNLVNLKS 8
NNLV LKS
Sbjct: 75 NNLVELKS 82




48|SequenceR|245|236|FHSHLNNLVN

>sp|P4_RTBVP|PROTEIN P4|Rice tungro bacilliform virus (isolate

Query: 1 FHSHLNNL 8
++SHLNNL
Sbjct: 153 YYSHLNNL 160


>sp|ORF2_TTVV8|UNCHARACTERIZED ORF2 protein|Torque teno virus (isolate

Query: 1 FHSHLNNLVN 10
F SHLNNL N
Sbjct: 66 FVSHLNNLAN 75


>sp|VP2_POVMK|MINOR capsid protein VP2|Murine polyomavirus (strain Kilham) (MPyV)

Query: 1 FHSHLNNLV 9
SH+NNLV
Sbjct: 37 LQSHINNLV 45


>sp|DNLI_VACCW|DNA ligase|Vaccinia virus (strain Western Reserve)

Query: 3 SHLNNLVN 10
+HLN+LVN
Sbjct: 541 THLNDLVN 548


>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)

Query: 3 SHLNNLVN 10
+HLN+LVN
Sbjct: 541 THLNDLVN 548


>sp|DNLI_VARV|DNA ligase|Variola virus

Query: 3 SHLNNLVN 10
+HLN+LVN
Sbjct: 541 THLNDLVN 548


>sp|DNLI_VAR67|DNA ligase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3 SHLNNLVN 10
+HLN+LVN
Sbjct: 541 THLNDLVN 548


>sp|DNLI_VACCC|DNA ligase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 SHLNNLVN 10
+HLN+LVN
Sbjct: 541 THLNDLVN 548


>sp|DNLI_MONPV|DNA ligase|Monkeypox virus (MPXV)

Query: 3 SHLNNLVN 10
+HLN+LVN
Sbjct: 543 THLNDLVN 550


>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain

Query: 1 FHSHLNNLVN 10
F SHL+ L+N
Sbjct: 1348 FQSHLSGLLN 1357


>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 1 FHSHLNNL 8
H+HLN+L
Sbjct: 640 LHTHLNHL 647


>sp|L_IPPYV|RNA-DIRECTED RNA polymerase L|Ippy mammarenavirus (isolate Rat/Central African

Query: 1 FHSHLNNLVN 10
FH++L++L+N
Sbjct: 1344 FHNYLSSLLN 1353


>sp|SPIKE_BCHK9|SPIKE glycoprotein|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 3 SHLNNLVN 10
+HLNNL N
Sbjct: 425 THLNNLFN 432


>sp|ENV_SFVCP|ENVELOPE glycoprotein gp130|Simian foamy virus (isolate chimpanzee)

Query: 1 FHSHLNNL 8
H+HLN+L
Sbjct: 639 LHTHLNHL 646


>sp|PP3_DMSVA|PROTEIN PP3|Drosophila melanogaster sigma virus (isolate

Query: 1 FHSHLNNLVN 10
+H H+ N++N
Sbjct: 244 YHYHIKNIIN 253


>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1

Query: 2 HSHLNNL 8
H+HLN+L
Sbjct: 641 HTHLNHL 647


>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3

Query: 2 HSHLNNL 8
H+HLN+L
Sbjct: 634 HTHLNHL 640


>sp|VP33_NPVOP|33 kDa early protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 FHSHLNN 7
FH+H+N+
Sbjct: 248 FHNHIND 254


>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)

Query: 1 FHSHLNNLV 9
+HS+ NN++
Sbjct: 214 YHSYANNIL 222


>sp|NRAM_INBVI|NEURAMINIDASE B virus (strain B/Victoria/3/1985)

Query: 1 FHSHLNNLV 9
+HS+ NN++
Sbjct: 213 YHSYANNIL 221


>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)

Query: 1 FHSHLNNLV 9
+HS+ NN++
Sbjct: 214 YHSYANNIL 222


>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)

Query: 1 FHSHLNNLV 9
+HS+ NN++
Sbjct: 214 YHSYANNIL 222


>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)

Query: 1 FHSHLNNLV 9
+HS+ NN++
Sbjct: 214 YHSYANNIL 222


>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)

Query: 1 FHSHLNNLV 9
+HS+ NN++
Sbjct: 213 YHSYANNIL 221


>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)

Query: 1 FHSHLNNLV 9
+HS+ NN++
Sbjct: 213 YHSYANNIL 221


>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)

Query: 1 FHSHLNNLV 9
+HS+ NN++
Sbjct: 213 YHSYANNIL 221


>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong

Query: 1 FHSHLNNLV 9
+HS+ NN++
Sbjct: 214 YHSYANNIL 222


>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)

Query: 1 FHSHLNNLV 9
+HS+ NN++
Sbjct: 213 YHSYANNIL 221


>sp|VF197_IIV3|PUTATIVE tyrosine phosphatase 067L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 FHSHLNNLVN 10
+HS NLVN
Sbjct: 129 YHSQRPNLVN 138


>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P

Query: 1 FHSHLNNLVN 10
F + NNLVN
Sbjct: 42 FPCYFNNLVN 51




49|SequenceR|250|241|DDVLIFHSHL

>sp|R1A_GLRV3|REPLICASE protein 1a|Grapevine leafroll-associated virus 3 (isolate

Query: 1 DDVLIFH 7
DD+L+FH
Sbjct: 1899 DDILVFH 1905


>sp|R1AB_GLRV3|REPLICASE polyprotein 1ab|Grapevine leafroll-associated virus 3 (isolate

Query: 1 DDVLIFH 7
DD+L+FH
Sbjct: 1899 DDILVFH 1905


>sp|TIPL_BPN15|TAIL tip protein L|Escherichia phage N15 (Bacteriophage N15)

Query: 2 DVLIFHSH 9
DVL FH+H
Sbjct: 30 DVLRFHAH 37


>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 DVLIFHSHL 10
D+ +FHSH
Sbjct: 3043 DLCLFHSHF 3051


>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 DVLIFHSHL 10
D+ +FHSH
Sbjct: 3060 DLCLFHSHF 3068


>sp|VP5_EHDV1|OUTER capsid protein VP5|Epizootic hemorrhagic disease virus 1

Query: 1 DDVLIFH 7
DDV +FH
Sbjct: 376 DDVFMFH 382


>sp|YR626_MIMIV|UNCHARACTERIZED protein R626|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DDVLIFHSHL 10
+DV +FH H+
Sbjct: 128 EDVNMFHQHM 137


>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus

Query: 2 DVLIFHSHL 10
DVL H HL
Sbjct: 671 DVLTLHFHL 679


>sp|YR825_MIMIV|PUTATIVE ankyrin repeat protein R825|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DDVLIFH 7
DDV IFH
Sbjct: 255 DDVYIFH 261


>sp|POLG_PYFV1|GENOME polyprotein|Parsnip yellow fleck virus (isolate

Query: 1 DDVLIFHS 8
DD +FHS
Sbjct: 493 DDARVFHS 500


>sp|L_TIBVC|RNA-DIRECTED RNA polymerase L|Tibrogargan virus (strain CS132) (TIBV)

Query: 1 DDVLIFHSH 9
DD+LI H H
Sbjct: 1793 DDMLISHLH 1801


>sp|V13_SPTNK|PUTATIVE helicase V13|Sputnik virophage

Query: 1 DDVLIFH 7
+DV++FH
Sbjct: 150 EDVMVFH 156




50|SequenceR|255|246|KGVTGDDVLI

>sp|POLG_PVMA|GENOME polyprotein|Potato virus A (PVA)

Query: 2 GVTGDDVLI 10
GV GDD+LI
Sbjct: 2622 GVNGDDLLI 2630


>sp|POL1_GCMV|RNA1 polyprotein|Grapevine chrome mosaic virus (GCMV)

Query: 1 KGVTGDDVLI 10
KGV GDD+ I
Sbjct: 1359 KGVNGDDLYI 1368


>sp|RPB2_ASFWA|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (isolate

Query: 2 GVTGDDVLI 10
G+TGDD +I
Sbjct: 280 GMTGDDSII 288


>sp|RPB2_ASFP4|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (isolate

Query: 2 GVTGDDVLI 10
G+TGDD +I
Sbjct: 280 GMTGDDSII 288


>sp|RPB2_ASFM2|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (isolate

Query: 2 GVTGDDVLI 10
G+TGDD +I
Sbjct: 280 GMTGDDSII 288


>sp|RPB2_ASFK5|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (isolate

Query: 2 GVTGDDVLI 10
G+TGDD +I
Sbjct: 280 GMTGDDSII 288


>sp|RPB2_ASFB7|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (strain

Query: 2 GVTGDDVLI 10
G+TGDD +I
Sbjct: 280 GMTGDDSII 288


>sp|POLG_BOVEV|GENOME polyprotein|Bovine enterovirus (strain VG-5-27) (BEV)

Query: 1 KGVTGDDVL 9
+GV+ DDVL
Sbjct: 493 RGVSNDDVL 501


>sp|VF229_IIV3|UNCHARACTERIZED protein 229L|Invertebrate iridescent virus 3 (IIV-3)

Query: 3 VTGDDVLI 10
VTG+D+LI
Sbjct: 258 VTGNDILI 265


>sp|ENDO2_BPT5|PUTATIVE endonuclease|Escherichia phage T5 (Enterobacteria phage

Query: 2 GVTGDDVL 9
G+TG DVL
Sbjct: 165 GITGKDVL 172


>sp|RDRP_HASV|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Helicoverpa armigera stunt virus (HaSV)

Query: 1 KGVTGD 6
KGVTGD
Sbjct: 1590 KGVTGD 1595


>sp|YR466_MIMIV|UNCHARACTERIZED protein R466|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 KGVTGDDVL 9
KG+TG+D +
Sbjct: 238 KGITGNDAI 246


>sp|POLG_TEV|GENOME polyprotein|Tobacco etch virus (TEV)

Query: 3 VTGDDVLI 10
V GDD+LI
Sbjct: 2624 VNGDDLLI 2631


>sp|POLG_PVYN|GENOME polyprotein|Potato virus Y (strain N)

Query: 3 VTGDDVLI 10
V GDD+LI
Sbjct: 2626 VNGDDLLI 2633


>sp|POLG_PVYHU|GENOME polyprotein|Potato virus Y (strain Hungarian)

Query: 3 VTGDDVLI 10
V GDD+LI
Sbjct: 2624 VNGDDLLI 2631


>sp|POLG_PEMVC|GENOME polyprotein|Pepper mottle virus (isolate California)

Query: 3 VTGDDVLI 10
V GDD+LI
Sbjct: 2625 VNGDDLLI 2632


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2 GVTGDDV 8
G+TGD+V
Sbjct: 437 GITGDNV 443


>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 2 GVTGDDV 8
G+TGD+V
Sbjct: 437 GITGDNV 443


>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 2 GVTGDDV 8
G+TGD+V
Sbjct: 437 GITGDNV 443


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 GVTGDDV 8
G+TGD+V
Sbjct: 437 GITGDNV 443


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004)

Query: 2 GVTGDDV 8
G+TGD+V
Sbjct: 437 GITGDNV 443


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 2 GVTGDDV 8
G+TGD+V
Sbjct: 437 GITGDNV 443


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 3 VTGDDV 8
VTGDDV
Sbjct: 1051 VTGDDV 1056


>sp|VG64_ICHVA|UNCHARACTERIZED protein ORF64|Ictalurid herpesvirus 1 (strain Auburn)

Query: 4 TGDDVLI 10
TGDD LI
Sbjct: 123 TGDDALI 129


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 3 VTGDDV 8
VTGDDV
Sbjct: 1071 VTGDDV 1076


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 3 VTGDDV 8
VTGDDV
Sbjct: 1101 VTGDDV 1106


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 3 VTGDDV 8
VTGDDV
Sbjct: 1051 VTGDDV 1056


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 3 VTGDDV 8
VTGDDV
Sbjct: 1071 VTGDDV 1076


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 3 VTGDDV 8
VTGDDV
Sbjct: 1101 VTGDDV 1106


>sp|YL675_MIMIV|PUTATIVE ankyrin repeat protein L675|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 KGVTGDDVLI 10
KGV+ DD+++
Sbjct: 434 KGVSCDDIVL 443


>sp|ENLYS_BPT1|SAR-ENDOLYSIN phage T1 (Bacteriophage T1)

Query: 2 GVTGDDVL 9
G+TG DV+
Sbjct: 46 GITGPDVI 53




51|SequenceR|260|251|VEAGYKGVTG

>sp|DUT_VZVO|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain

Query: 1 VEAGYKGV 8
++AGY+GV
Sbjct: 123 IDAGYRGV 130


>sp|DUT_VZVD|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain

Query: 1 VEAGYKGV 8
++AGY+GV
Sbjct: 123 IDAGYRGV 130


>sp|VAT_CERV|APHID transmission protein|Carnation etched ring virus (CERV)

Query: 1 VEAGYKGVTG 10
+E+G KG+ G
Sbjct: 157 IESGLKGIIG 166


>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)

Query: 1 VEAGYKGVTG 10
VE G+ G TG
Sbjct: 1561 VETGFVGTTG 1570


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2 EAGYKGV 8
+AGY+GV
Sbjct: 2016 QAGYRGV 2022


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 2 EAGYKGV 8
+AGY+GV
Sbjct: 2017 QAGYRGV 2023


>sp|DUT_EHV1B|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Equine herpesvirus 1 (strain

Query: 1 VEAGYKGV 8
V++GY+GV
Sbjct: 107 VDSGYRGV 114


>sp|DPOL1_BPK54|DEPOLYMERASE 1, capsule K8-specific|Klebsiella phage K5-4 (Bacteriophage K5-4)

Query: 1 VEAGYKGVT 9
+E+G+KG T
Sbjct: 402 IESGWKGTT 410




52|SequenceR|265|256|ERRLRVEAGY

>sp|P4_PCVC|UNCHARACTERIZED protein p4|Penicillium chrysogenum virus (isolate Caston/2003)

Query: 1 ERRLRVEAG 9
ER+LR EAG
Sbjct: 536 ERKLRAEAG 544


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 1 ERRLRVEAG 9
E+RL+ EAG
Sbjct: 123 EKRLKYEAG 131




53|SequenceR|270|261|ITKELERRLR

>sp|POL1_BAYMY|GENOME polyprotein 1|Barley yellow mosaic virus (isolate

Query: 1 ITKELERRLR 10
ITK+L+R LR
Sbjct: 1001 ITKDLDRNLR 1010


>sp|POL1_BAYMG|GENOME polyprotein 1|Barley yellow mosaic virus (isolate

Query: 1 ITKELERRLR 10
ITK+L+R LR
Sbjct: 1001 ITKDLDRNLR 1010


>sp|POL1_BAYMJ|GENOME polyprotein 1|Barley yellow mosaic virus (strain

Query: 1 ITKELERRLR 10
ITK+L+R LR
Sbjct: 1001 ITKDLDRNLR 1010


>sp|AC18_NPVAC|PROTEIN AC18|Autographa californica nuclear polyhedrosis virus

Query: 2 TKELERRLR 10
TK++E RLR
Sbjct: 18 TKDIEDRLR 26


>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 3 KELERRL 9
KELERR+
Sbjct: 555 KELERRI 561


>sp|TERS_BPMU|PROBABLE terminase, small subunit gp27|Escherichia phage Mu (Bacteriophage

Query: 1 ITKELERRLR 10
I++ELE+R+R
Sbjct: 175 ISEELEQRIR 184


>sp|1002L_ASFM2|PROTEIN MGF 100-2L|African swine fever virus (isolate

Query: 3 KELERRLR 10
K+LE+RLR
Sbjct: 43 KKLEKRLR 50


>sp|Y494R_PBCV1|PUTATIVE transcription factor A494R|Paramecium bursaria Chlorella virus 1

Query: 1 ITKELERRLR 10
+++ELE+RL+
Sbjct: 276 LSRELEKRLK 285




54|SequenceR|275|266|IRQQNITKEL

>sp|POL_FFV|PRO-POL polyprotein|Feline foamy virus (FFV) (Feline

Query: 1 IRQQNIT 7
+RQQN+T
Sbjct: 40 VRQQNVT 46


>sp|NCAP_PI3B|NUCLEOPROTEIN parainfluenza 3 virus (BPIV-3)

Query: 2 RQQNITK 8
RQ+NITK
Sbjct: 12 RQENITK 18


>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain

Query: 2 RQQNITK 8
RQ+NITK
Sbjct: 12 RQENITK 18




55|SequenceR|280|271|GIRAHIRQQN

>sp|VP1_RRSVT|STRUCTURAL protein VP1|Rice ragged stunt virus (isolate

Query: 2 IRAHIRQQN 10
IR +IRQQN
Sbjct: 744 IRDYIRQQN 752


>sp|TIP_SHV24|TYROSINE-PROTEIN kinase-interacting protein|Saimiriine herpesvirus 2 (strain 484-77)

Query: 2 IRAHIRQQN 10
+R H+R+QN
Sbjct: 152 VRRHVREQN 160


>sp|MCEL_RFVKA|MRNA-CAPPING enzyme catalytic subunit|Rabbit fibroma virus (strain Kasza)

Query: 2 IRAHIRQQN 10
+ AHIR QN
Sbjct: 507 VVAHIRDQN 515




56|SequenceR|285|276|VPVGQGIRAH

>sp|VG39_ICHVA|UNCHARACTERIZED protein ORF39|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 VPVGQGIRA 9
VP G+G+RA
Sbjct: 314 VPPGEGLRA 322


>sp|RDRP_HASV|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Helicoverpa armigera stunt virus (HaSV)

Query: 3 VGQGIRAH 10
VGQGI AH
Sbjct: 1068 VGQGIAAH 1075


>sp|YL894_MIMIV|PUTATIVE truncated GMC-type inactive oxidoreductase|Acanthamoeba polyphaga

Query: 3 VGQGIRAH 10
VGQG+R H
Sbjct: 404 VGQGLRNH 411


>sp|PP220_ASFWA|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 VPVGQGIRA 9
+P G G+RA
Sbjct: 1280 IPAGGGVRA 1288


>sp|PP220_ASFP4|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 VPVGQGIRA 9
+P G G+RA
Sbjct: 1279 IPAGGGVRA 1287


>sp|PP220_ASFB7|POLYPROTEIN pp220|African swine fever virus (strain

Query: 1 VPVGQGIRA 9
+P G G+RA
Sbjct: 1280 IPAGGGVRA 1288


>sp|RDRP_NCBVS|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Nudaurelia capensis beta virus (isolate

Query: 3 VGQGIRAH 10
+GQGI AH
Sbjct: 1017 LGQGISAH 1024


>sp|CHIT_NPVOP|PROBABLE endochitinase|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 4 GQGIRAH 10
GQG+ AH
Sbjct: 419 GQGVAAH 425


>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)

Query: 1 VPVGQGIR 8
VPVG G R
Sbjct: 233 VPVGPGFR 240




57|SequenceR|290|281|FILAVVPVGQ

>sp|POLS_SAV2|STRUCTURAL polyprotein|Alphavirus salmon subtype 2 (SAV2)

Query: 1 FILAVVPVGQ 10
+ILA PVGQ
Sbjct: 464 YILANCPVGQ 473


>sp|POLS_SAV1|STRUCTURAL polyprotein|Alphavirus salmon subtype 1 (SAV1)

Query: 1 FILAVVPVGQ 10
+ILA PVGQ
Sbjct: 463 YILANCPVGQ 472




58|SequenceR|295|286|NPGGEFILAV

>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 1 NPGGEFILAV 10
NP G F+ AV
Sbjct: 1269 NPTGHFVCAV 1278


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 1 NPGGEFILAV 10
NP G F+ AV
Sbjct: 1269 NPTGHFVCAV 1278


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 1 NPGGEFILAV 10
NP G F+ AV
Sbjct: 1269 NPTGHFVCAV 1278


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 1 NPGGEFILAV 10
NP G F+ AV
Sbjct: 1269 NPTGHFVCAV 1278


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 1 NPGGEFILAV 10
NP G F+ AV
Sbjct: 1269 NPTGHFVCAV 1278


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 1 NPGGEFILAV 10
NP G F+ AV
Sbjct: 1269 NPTGHFVCAV 1278


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 1 NPGGEFILAV 10
NP G F+ AV
Sbjct: 1269 NPTGHFVCAV 1278


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 1 NPGGEFILAV 10
NP G F+ AV
Sbjct: 1269 NPTGHFVCAV 1278


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 1 NPGGEFILAV 10
NP G F+ AV
Sbjct: 1269 NPTGHFVCAV 1278


>sp|LMBD2_REOVL|OUTER capsid protein lambda-2|Reovirus type 1 (strain Lang)

Query: 1 NPGGEFILAV 10
+PGG F++ +
Sbjct: 607 SPGGSFVMKI 616


>sp|POLG_RHDVS|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 NPGGEFILA 9
NP G F++A
Sbjct: 2179 NPAGLFVMA 2187


>sp|POLG_RHDVF|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 NPGGEFILA 9
NP G F++A
Sbjct: 2179 NPAGLFVMA 2187


>sp|POLG_RHDVB|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 NPGGEFILA 9
NP G F++A
Sbjct: 2179 NPAGLFVMA 2187


>sp|POLG_RHDVA|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 NPGGEFILA 9
NP G F++A
Sbjct: 2179 NPAGLFVMA 2187


>sp|POLG_RHDV3|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 NPGGEFILA 9
NP G F++A
Sbjct: 2179 NPAGLFVMA 2187


>sp|LMBD2_REOVD|OUTER capsid protein lambda-2|Reovirus type 3 (strain Dearing)

Query: 2 PGGEFILAV 10
PGG F++ +
Sbjct: 608 PGGSFVVKI 616




59|SequenceR|300|291|VTLIVNPGGE

>sp|ENV_SIVEK|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate EK505)

Query: 1 VTLIVNPGGE 10
+T I NPGG+
Sbjct: 343 ITFIPNPGGD 352


>sp|NS2_AADNV|NON-STRUCTURAL protein NS2|Aedes albopictus densovirus (isolate Boublik/1994)

Query: 1 VTLIVNPGGE 10
+T VNPGGE
Sbjct: 10 MTHSVNPGGE 19


>sp|HEPA_BHV1C|DNA helicase/primase complex-associated protein|Bovine herpesvirus 1.1

Query: 5 VNPGGE 10
+NPGGE
Sbjct: 298 LNPGGE 303


>sp|MTR1_PBCVX|TYPE II methyltransferase M.CvrRI|Paramecium bursaria Chlorella virus

Query: 3 LIVNPGGE 10
+I+NP GE
Sbjct: 224 VIINPDGE 231


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 3 LIVNPGGE 10
++ NPGGE
Sbjct: 1261 IMQNPGGE 1268


>sp|Y13E_BPT4|UNCHARACTERIZED 8.7 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 VTLIVNPG 8
V +IVNPG
Sbjct: 44 VLVIVNPG 51




60|SequenceR|305|296|QLYELVTLIV

***** No hits found ******


61|SequenceR|310|301|VPPSEQLYEL

>sp|KTHY_ASFK5|THYMIDYLATE kinase|African swine fever virus (isolate

Query: 3 PSEQLYEL 10
PSEQL+EL
Sbjct: 61 PSEQLHEL 68


>sp|DEPOL_BPKN1|DEPOLYMERASE, capsule KN1-specific|Klebsiella phage KN1-1 (Bacteriophage KN1-1)

Query: 1 VPPSEQLYE 9
+ P EQLY+
Sbjct: 306 IRPEEQLYQ 314


>sp|L_RSVT|RNA-DIRECTED RNA polymerase L|Rice stripe virus (isolate T)

Query: 3 PSEQLYEL 10
PSE+LY L
Sbjct: 238 PSEKLYAL 245


>sp|RIR2_BHV1C|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Bovine herpesvirus 1.1 (strain Cooper)

Query: 2 PPSEQLYEL 10
PP ++YEL
Sbjct: 220 PPPARIYEL 228


>sp|POL_FFV|PRO-POL polyprotein|Feline foamy virus (FFV) (Feline

Query: 1 VPPSEQLYEL 10
+PPS + Y+L
Sbjct: 800 IPPSRERYKL 809




62|SequenceR|315|306|CVVVPVPPSE

>sp|YL462_MIMIV|UNCHARACTERIZED protein L462|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 CVVVPVPPS 9
C +VP PPS
Sbjct: 142 CEIVPKPPS 150


>sp|CAPSD_BNYVS|CAPSID readthrough protein|Beet necrotic yellow vein virus

Query: 2 VVVPVPPS 9
+V+P PPS
Sbjct: 679 IVLPAPPS 686


>sp|POL_COYMV|POLYPROTEIN P3|Commelina yellow mottle virus (CoYMV)

Query: 2 VVVPVPPSE 10
VVVP+ P+E
Sbjct: 285 VVVPMQPTE 293


>sp|LTP_EHV1B|LARGE tegument protein deneddylase|Equine herpesvirus 1 (strain Ab4p)

Query: 3 VVPVPPSE 10
VVPVPP++
Sbjct: 2651 VVPVPPTD 2658


>sp|PRIM_EHV1V|DNA primase|Equine herpesvirus 1 (strain V592)

Query: 2 VVVPVPP 8
V VPVPP
Sbjct: 801 VTVPVPP 807


>sp|PRIM_EHV1B|DNA primase|Equine herpesvirus 1 (strain Ab4p)

Query: 2 VVVPVPP 8
V VPVPP
Sbjct: 801 VTVPVPP 807


>sp|YR553_MIMIV|UNCHARACTERIZED protein R553|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 VVVPVPPSE 10
VV P+PP +
Sbjct: 440 VVTPLPPQK 448


>sp|POL_FFV|PRO-POL polyprotein|Feline foamy virus (FFV) (Feline

Query: 5 PVPPSE 10
P+PPSE
Sbjct: 884 PLPPSE 889


>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P

Query: 2 VVVPVPPS 9
V +P PPS
Sbjct: 205 VFIPAPPS 212


>sp|UNG_BHV1C|URACIL-DNA glycosylase|Bovine herpesvirus 1.1 (strain Cooper)

Query: 4 VPVPPS 9
VPVPPS
Sbjct: 66 VPVPPS 71


>sp|RSAMI_BPPM6|RADICAL SAM Nalpha-GlyT isomerase|Pseudomonas phage M6

Query: 2 VVVPVPPSE 10
+V P PP E
Sbjct: 458 IVEPTPPEE 466


>sp|ORFC2_PICV|UNCHARACTERIZED protein ORFC2|Pigeon circovirus (PiCV) (Columbid circovirus)

Query: 2 VVVPVPP 8
VVVPVPP
Sbjct: 28 VVVPVPP 34


>sp|NEF_HV1S9|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 3 VVPVPPSE 10
+VPV PSE
Sbjct: 143 LVPVDPSE 150


>sp|POLG_FCVC6|GENOME polyprotein|Feline calicivirus (strain CFI/68 FIV)

Query: 1 CVVVPVPPSE 10
CVVV PP +
Sbjct: 1311 CVVVNGPPHD 1320




63|SequenceR|320|311|RGTGECVVVP

>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain

Query: 4 GECVVVP 10
GEC++VP
Sbjct: 848 GECIIVP 854


>sp|UL95_SHV21|GENE 34 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 3 TGECVVVP 10
+G+C++VP
Sbjct: 291 SGDCLIVP 298


>sp|CAPSD_BPJP3|CAPSID protein|Enterobacteria phage JP34 (Bacteriophage JP34)

Query: 2 GTGECVVVP 10
GTG+ VVP
Sbjct: 14 GTGDVTVVP 22


>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)

Query: 3 TGECVVVP 10
T EC+V+P
Sbjct: 372 TNECLVLP 379


>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)

Query: 3 TGECVVVP 10
T EC+V+P
Sbjct: 372 TNECLVLP 379


>sp|ENV_CAEVC|ENVELOPE glycoprotein|Caprine arthritis encephalitis virus (strain

Query: 3 TGECVVVP 10
TGECV P
Sbjct: 427 TGECVQRP 434


>sp|ENV_CAEVG|ENVELOPE glycoprotein|Caprine arthritis encephalitis virus (strain

Query: 3 TGECVVVP 10
TGECV P
Sbjct: 424 TGECVQRP 431


>sp|VG65_BPML5|GENE 65 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 1 RGTGECVV 8
R TG CVV
Sbjct: 178 RETGSCVV 185


>sp|ENV_SIVEK|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate EK505)

Query: 2 GTGEC 6
GTGEC
Sbjct: 228 GTGEC 232


>sp|CAPSD_BPGA|CAPSID protein|Enterobacteria phage GA (Bacteriophage GA)

Query: 2 GTGECVVVP 10
GTG VVP
Sbjct: 14 GTGNVTVVP 22


>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)

Query: 3 TGECVVVP 10
T EC+++P
Sbjct: 372 TNECLILP 379


>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)

Query: 3 TGECVVVP 10
T EC+++P
Sbjct: 372 TNECLILP 379


>sp|UL97_MUHVS|SERINE/THREONINE protein kinase M97|Murid herpesvirus 1 (strain Smith)

Query: 3 TGECVVV 9
TG CVVV
Sbjct: 428 TGHCVVV 434




64|SequenceR|325|316|LLDAARGTGE

>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)

Query: 1 LLDAARGTGE 10
L++AAR GE
Sbjct: 647 LMEAARNAGE 656


>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant

Query: 1 LLDAARGTGE 10
L++AAR GE
Sbjct: 647 LMEAARNAGE 656


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 1 LLDAARGT 8
+LDA RGT
Sbjct: 322 ILDALRGT 329


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 1 LLDAARGT 8
+LDA RGT
Sbjct: 322 ILDALRGT 329




65|SequenceR|330|321|KHIYALLDAA

>sp|UNG_HHV6Z|URACIL-DNA glycosylase|Human herpesvirus 6B (strain Z29)

Query: 1 KHIYALLD 8
KH+Y L+D
Sbjct: 51 KHVYKLVD 58


>sp|UNG_HHV6U|URACIL-DNA glycosylase|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 KHIYALLD 8
KH+Y L+D
Sbjct: 51 KHVYKLVD 58


>sp|DPOL_ASFM2|DNA polymerase beta|African swine fever virus (isolate

Query: 1 KHIYALLDA 9
KH+ ALLD+
Sbjct: 1167 KHLQALLDS 1175


>sp|DPOL_ASFWA|DNA polymerase beta|African swine fever virus (isolate

Query: 1 KHIYALLDA 9
KH+ ALLD+
Sbjct: 1160 KHLQALLDS 1168


>sp|DPOL_ASFP4|DNA polymerase beta|African swine fever virus (isolate

Query: 1 KHIYALLDA 9
KH+ ALLD+
Sbjct: 1163 KHLQALLDS 1171


>sp|DPOL_ASFB7|DNA polymerase beta|African swine fever virus (strain

Query: 1 KHIYALLDA 9
KH+ ALLD+
Sbjct: 1172 KHLQALLDS 1180


>sp|CAPSD_AQRVC|INNER capsid protein VP3|Aquareovirus C (isolate Golden

Query: 1 KHIYALLDAA 10
KH+ A LD+A
Sbjct: 177 KHLSAYLDSA 186




66|SequenceR|335|326|GEETQKHIYA

>sp|SCAF_EHV1V|CAPSID scaffolding protein|Equine herpesvirus 1 (strain V592)

Query: 1 GEETQKHIYA 10
GE TQKHI A
Sbjct: 308 GERTQKHISA 317


>sp|SCAF_EHV1B|CAPSID scaffolding protein|Equine herpesvirus 1 (strain Ab4p)

Query: 1 GEETQKHIYA 10
GE TQKHI A
Sbjct: 308 GERTQKHISA 317


>sp|TRM3_GAHVM|TRIPARTITE terminase subunit 3|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 GEETQKH 7
GEET++H
Sbjct: 7 GEETKRH 13


>sp|VOLD_BPP2|OLD nuclease|Escherichia phage P2 (Bacteriophage P2)

Query: 2 EETQKHIY 9
E+TQKHI+
Sbjct: 516 EKTQKHIH 523


>sp|PRIM_ASFK5|PUTATIVE helicase/primase complex protein|African swine fever virus (isolate

Query: 3 ETQKHIY 9
+TQKHIY
Sbjct: 364 DTQKHIY 370


>sp|PRIM_ASFB7|PUTATIVE helicase/primase complex protein|African swine fever virus (strain

Query: 3 ETQKHIY 9
+TQKHIY
Sbjct: 375 DTQKHIY 381


>sp|PRIM_ASFM2|PUTATIVE helicase/primase complex protein|African swine fever virus (isolate

Query: 3 ETQKHIY 9
+TQKHIY
Sbjct: 369 DTQKHIY 375


>sp|RPC1_BPHK0|26 kDa repressor protein|Escherichia phage HK022 (Bacteriophage HK022)

Query: 1 GEETQKHIYA 10
GEE Q HI A
Sbjct: 212 GEEEQLHILA 221


>sp|VE4_HPV1|PROTEIN E4|Human papillomavirus type 1 (Human

Query: 2 EETQKHIYA 10
++++KH+YA
Sbjct: 51 KDSRKHLYA 59




67|SequenceR|340|331|DPLNGGEETQ

>sp|Y030_NPVAC|UNCHARACTERIZED 54.7 kDa protein in|Autographa californica nuclear polyhedrosis

Query: 3 LNGGEE 8
LNGGEE
Sbjct: 405 LNGGEE 410


>sp|VP5_AHSV9|OUTER capsid protein VP5|African horse sickness virus 9

Query: 1 DPLNGGEE 8
DPLN GE+
Sbjct: 86 DPLNPGEQ 93


>sp|RDRP_CMVIX|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain Ixora)

Query: 2 PLNGGEETQ 10
P GGEET+
Sbjct: 795 PHGGGEETE 803


>sp|VP7_ROTBS|OUTER capsid glycoprotein VP7|Rotavirus C (isolate

Query: 2 PLNGGEETQ 10
PLN G++T+
Sbjct: 280 PLNNGQKTR 288


>sp|LTP_MUHVK|LARGE tegument protein deneddylase|Murid herpesvirus 1 (strain K181)

Query: 2 PLNGGEETQ 10
P NG ETQ
Sbjct: 100 PFNGTAETQ 108


>sp|Y399_SIRV1|UNCHARACTERIZED protein 399|Sulfolobus islandicus rod-shaped virus 1

Query: 2 PLNGGE 7
PLNGG+
Sbjct: 74 PLNGGD 79


>sp|VE1_MNPVA|REPLICATION protein E1|Mastomys natalensis papillomavirus (isolate African

Query: 1 DPLNGGEETQ 10
DP + GE TQ
Sbjct: 580 DPKDNGEHTQ 589


>sp|UNG_EHV2|URACIL-DNA glycosylase|Equine herpesvirus 2 (strain 86/87)

Query: 1 DPLNGGEET 9
DP +GG+ T
Sbjct: 90 DPYHGGQAT 98


>sp|POLG_FMDV1|GENOME polyprotein|Foot-and-mouth disease virus (strain A10/Holland/1961

Query: 1 DPLNGGEETQ 10
+PLNG +TQ
Sbjct: 186 EPLNGDWKTQ 195


>sp|OE56_NPVHZ|OCCLUSION-DERIVED virus envelope protein E56|Heliothis zea nuclear polyhedrosis

Query: 3 LNGGEETQ 10
LNGGE+ +
Sbjct: 14 LNGGEQVE 21


>sp|ICP27_EBVG|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain GD1)

Query: 1 DPLNGGEE 8
DP+ G EE
Sbjct: 40 DPMEGSEE 47


>sp|ICP27_EBVB9|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain B95-8)

Query: 1 DPLNGGEE 8
DP+ G EE
Sbjct: 40 DPMEGSEE 47


>sp|ICP27_EBVA8|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain AG876)

Query: 1 DPLNGGEE 8
DP+ G EE
Sbjct: 40 DPMEGSEE 47




68|SequenceR|345|336|DPEAADPLNG

>sp|POLG_FMDS2|GENOME polyprotein|Foot-and-mouth disease virus serotype SAT-2

Query: 1 DPEAADPLNG 10
DP++ADP+ G
Sbjct: 521 DPKSADPIYG 530


>sp|DPOL_HHBV|PROTEIN P|Heron hepatitis B virus (HHBV)

Query: 2 PEAADPLN 9
PEA DPL+
Sbjct: 51 PEAGDPLH 58


>sp|POLG_FMDVZ|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 DPEAADPLNG 10
DP+ ADP+ G
Sbjct: 522 DPKTADPVYG 531


>sp|POLG_FMDVA|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 DPEAADPLNG 10
DP+ ADP+ G
Sbjct: 522 DPKTADPVYG 531


>sp|POLG_FMDA1|GENOME polyprotein|Foot-and-mouth disease virus serotype Asia-1

Query: 1 DPEAADPLNG 10
DP+ ADP+ G
Sbjct: 522 DPKTADPVYG 531


>sp|POLG_FMDV1|GENOME polyprotein|Foot-and-mouth disease virus (strain A10/Holland/1961

Query: 1 DPEAADPLNG 10
DP+ ADP+ G
Sbjct: 522 DPKTADPVYG 531


>sp|POLG_FMDVO|GENOME polyprotein|Foot-and-mouth disease virus serotype O

Query: 1 DPEAADPLNG 10
DP+ ADP+ G
Sbjct: 522 DPKTADPVYG 531


>sp|POLG_FMDVP|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 DPEAADPLNG 10
DP+ ADP+ G
Sbjct: 522 DPKTADPVYG 531


>sp|TEG4_EHV1V|TEGUMENT protein UL21 homolog|Equine herpesvirus 1 (strain V592)

Query: 2 PEAADPL 8
PEA DPL
Sbjct: 370 PEARDPL 376


>sp|TEG4_EHV1B|TEGUMENT protein UL21 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 2 PEAADPL 8
PEA DPL
Sbjct: 370 PEARDPL 376


>sp|RDRP_AQRVC|RNA-DIRECTED RNA polymerase VP2|Aquareovirus C (isolate Golden

Query: 1 DPEAADPLN 9
DP+ DPLN
Sbjct: 445 DPQWHDPLN 453


>sp|POLG_FMDVC|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 DPEAADPLNG 10
DP+ ADP G
Sbjct: 522 DPKTADPAYG 531


>sp|POLG_FMDVI|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 DPEAADPLNG 10
DP+ ADP G
Sbjct: 522 DPKTADPAYG 531


>sp|POLG_FMDVS|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 DPEAADPLNG 10
DP+ ADP G
Sbjct: 522 DPKTADPAYG 531


>sp|POLG_FMDV5|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 DPEAADPLNG 10
DP+ ADP G
Sbjct: 522 DPKTADPAYG 531


>sp|POLG_FMDVT|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 DPEAADPLNG 10
DP+ ADP G
Sbjct: 522 DPKTADPAYG 531


>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 PEAADPLNG 10
PE D LNG
Sbjct: 193 PEIRDALNG 201


>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 2 PEAADPLNG 10
PE D LNG
Sbjct: 193 PEIRDALNG 201


>sp|SHUT_ADECR|SHUTOFF protein|Canine adenovirus serotype 1 (strain

Query: 1 DPEAADPLNG 10
DP +PLN
Sbjct: 629 DPHTGEPLNA 638


>sp|SHUT_ADECC|SHUTOFF protein|Canine adenovirus serotype 1 (strain

Query: 1 DPEAADPLNG 10
DP +PLN
Sbjct: 629 DPHTGEPLNA 638


>sp|RPOL_BPK11|DNA-DIRECTED RNA polymerase|Enterobacteria phage K11 (Bacteriophage K11)

Query: 4 AADPLN 9
AADPLN
Sbjct: 516 AADPLN 521




69|SequenceR|350|341|ITSIIDPEAA

***** No hits found ******


70|SequenceR|355|346|NFTKKITSII

>sp|AN_NPVOP|ALKALINE nuclease|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 1 NFTKKITSII 10
+FTK+ TS++
Sbjct: 357 DFTKRYTSLV 366


>sp|POLG_PVMA|GENOME polyprotein|Potato virus A (PVA)

Query: 1 NFTKKITSII 10
+FTKK+ II
Sbjct: 660 DFTKKVRDII 669


>sp|MVP_PVMA|P3N-PIPO polyprotein|Potato virus A (PVA)

Query: 1 NFTKKITSII 10
+FTKK+ II
Sbjct: 660 DFTKKVRDII 669




71|SequenceR|360|351|ENQGFNFTKK

>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1 ENQGFNFTKK 10
EN FNF K+
Sbjct: 6435 ENIAFNFVKQ 6444


Query: 2 NQGFNFTKK 10
N+G ++TKK
Sbjct: 1316 NKGVDYTKK 1324


>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 2 NQGFNFTKK 10
N G+NF K+
Sbjct: 1957 NSGYNFCKR 1965


>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 2 NQGFNFTKK 10
N G+NF K+
Sbjct: 1955 NSGYNFCKR 1963


>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 2 NQGFNFTKK 10
N G+NF K+
Sbjct: 1955 NSGYNFCKR 1963


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 2 NQGFNFTKK 10
N G+NF K+
Sbjct: 1957 NSGYNFCKR 1965


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 2 NQGFNFTKK 10
N G+NF K+
Sbjct: 1955 NSGYNFCKR 1963


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 2 NQGFNFTKK 10
N G+NF K+
Sbjct: 1955 NSGYNFCKR 1963


>sp|VSR_POPMV|RNA silencing suppressor|Poplar mosaic virus (isolate ATCC

Query: 2 NQGFNFTKK 10
N GF FTK+
Sbjct: 69 NPGFYFTKR 77


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 2 NQGFNFTKK 10
N+G ++TKK
Sbjct: 1316 NKGVDYTKK 1324


>sp|POLG_VESVA|GENOME polyprotein|Vesicular exanthema of swine virus

Query: 1 ENQGFNFTKK 10
EN+G FT K
Sbjct: 665 ENKGKTFTSK 674


>sp|POLG_TMEVG|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 2 NQGFNFTK 9
N+GF F K
Sbjct: 1198 NEGFTFAK 1205


>sp|POLG_TMEVD|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 2 NQGFNFTK 9
N+GF F K
Sbjct: 1196 NEGFTFAK 1203


>sp|POLG_TMEVB|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 2 NQGFNFTK 9
N+GF F K
Sbjct: 1198 NEGFTFAK 1205




72|SequenceR|365|356|FLHLAENQGF

>sp|GGAG_MLVMN|GLYCO-GAG protein|Moloney murine leukemia virus (strain

Query: 1 FLHLAENQG 9
FL+L+EN G
Sbjct: 82 FLYLSENMG 90


>sp|GGAG_MLVFP|GLYCO-GAG protein|Friend murine leukemia virus (isolate

Query: 1 FLHLAENQG 9
FL+L+EN G
Sbjct: 82 FLYLSENMG 90


>sp|GGAG_MLVFF|GLYCO-GAG protein|Friend murine leukemia virus (isolate

Query: 1 FLHLAENQG 9
FL+L+EN G
Sbjct: 82 FLYLSENMG 90


>sp|GGAG_MLVF5|GLYCO-GAG protein|Friend murine leukemia virus (isolate

Query: 1 FLHLAENQG 9
FL+L+EN G
Sbjct: 82 FLYLSENMG 90


>sp|SCAF_SHV21|CAPSID scaffolding protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 FLHLAEN 7
FLHL EN
Sbjct: 75 FLHLTEN 81


>sp|B_BPPHM|INTERNAL scaffolding protein VP3|Bdellovibrio phage phiMH2K (Bacteriophage

Query: 3 HLAENQGF 10
HLA QGF
Sbjct: 49 HLARRQGF 56


>sp|UL34_HCMVT|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1 FLHLAENQGF 10
FLHL N G
Sbjct: 221 FLHLLMNSGL 230


>sp|UL34_HCMVM|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 FLHLAENQGF 10
FLHL N G
Sbjct: 221 FLHLLMNSGL 230


>sp|UL34_HCMVA|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 FLHLAENQGF 10
FLHL N G
Sbjct: 221 FLHLLMNSGL 230


>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)

Query: 1 FLHLAENQG 9
F HL EN G
Sbjct: 331 FQHLIENYG 339


>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)

Query: 1 FLHLAENQG 9
F HL EN G
Sbjct: 331 FQHLIENYG 339




73|SequenceR|370|361|EMLTQFLHLA

>sp|ANCHR_BPKNT|ANCHOR protein|Klebsiella phage NTUH-K2044-K1-1 (Bacteriophage

Query: 4 TQFLHLA 10
TQFLHLA
Sbjct: 92 TQFLHLA 98


>sp|ANCHR_BPK34|ANCHOR protein|Klebsiella phage KP34 (Bacteriophage KP34)

Query: 4 TQFLHLA 10
TQFLHLA
Sbjct: 92 TQFLHLA 98


>sp|PG055_VARV|PROTEIN OPG055|Variola virus

Query: 2 MLTQFLH 8
MLT+FLH
Sbjct: 260 MLTEFLH 266


>sp|PG055_VAR67|PROTEIN OPG055|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2 MLTQFLH 8
MLT+FLH
Sbjct: 260 MLTEFLH 266


>sp|PG055_VACCW|PROTEIN OPG055|Vaccinia virus (strain Western Reserve)

Query: 2 MLTQFLH 8
MLT+FLH
Sbjct: 260 MLTEFLH 266


>sp|PG055_VACCP|PROTEIN OPG055|Vaccinia virus (strain L-IVP) (VACV)

Query: 2 MLTQFLH 8
MLT+FLH
Sbjct: 256 MLTEFLH 262


>sp|PG055_VACCC|PROTEIN OPG055|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 MLTQFLH 8
MLT+FLH
Sbjct: 260 MLTEFLH 266


>sp|PG055_MONPV|PROTEIN OPG055|Monkeypox virus (MPXV)

Query: 2 MLTQFLH 8
MLT+FLH
Sbjct: 260 MLTEFLH 266


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 3 LTQFLHLA 10
LT+F HLA
Sbjct: 3975 LTEFSHLA 3982


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 3 LTQFLHLA 10
LT+F HLA
Sbjct: 3982 LTEFSHLA 3989


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 3 LTQFLHLA 10
LT+F HLA
Sbjct: 3975 LTEFSHLA 3982


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 3 LTQFLHLA 10
LT+F HLA
Sbjct: 3982 LTEFSHLA 3989




74|SequenceR|375|366|KRKMCEMLTQ

>sp|POLG_BOVEV|GENOME polyprotein|Bovine enterovirus (strain VG-5-27) (BEV)

Query: 1 KRKMCEML 8
KRK+C++L
Sbjct: 1074 KRKVCQIL 1081


>sp|PORTL_HHV7J|PORTAL protein|Human herpesvirus 7 (strain JI)

Query: 2 RKMCEML 8
RKMC++L
Sbjct: 288 RKMCQLL 294




75|SequenceR|380|371|VTILEKRKMC

>sp|POL_FIVT2|POL polyprotein|Feline immunodeficiency virus (isolate TM2)

Query: 1 VTILEKRKM 9
+TILEK+K+
Sbjct: 800 ITILEKQKI 808


>sp|UL87_HHV7J|PROTEIN U58|Human herpesvirus 7 (strain JI)

Query: 1 VTILEKRKM 9
+T+LEKR M
Sbjct: 612 LTLLEKRNM 620




76|SequenceR|385|376|SGIHFVTILE

***** No hits found ******


77|SequenceR|390|381|DQHEDSGIHF

>sp|YR656_MIMIV|UNCHARACTERIZED protein R656|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DQHEDSGIHF 10
DQH++ HF
Sbjct: 427 DQHKEYAPHF 436


>sp|REPA_SSVN|REPLICATION-ASSOCIATED protein A|Sugarcane streak virus (isolate South

Query: 1 DQHEDSGIH 9
+ HED G H
Sbjct: 58 ETHEDGGYH 66


>sp|REP_SSVN|REPLICATION-ASSOCIATED protein|Sugarcane streak virus (isolate South

Query: 1 DQHEDSGIH 9
+ HED G H
Sbjct: 58 ETHEDGGYH 66


>sp|VG55_MILVL|UNCHARACTERIZED 55 kDa protein|Mirafiori lettuce virus (isolate

Query: 1 DQHEDSGIH 9
D +DSG H
Sbjct: 314 DNDQDSGFH 322


>sp|YL098_MIMIV|PUTATIVE BTB/POZ domain-containing protein L98|Acanthamoeba polyphaga

Query: 1 DQHEDSGIHF 10
D H S +HF
Sbjct: 23 DNHTKSKVHF 32


>sp|NRDEB_BPSPB|RIBONUCLEOSIDE-DIPHOSPHATE reductase nrdEB subunit alpha|Bacillus phage SPbeta (Bacillus phage

Query: 2 QHEDSGIHF 10
QH D GI F
Sbjct: 1030 QHVDQGISF 1038


>sp|VE5_CRPVW|PROBABLE protein E5|Cottontail rabbit papillomavirus (strain Washington

Query: 3 HEDSGIH 9
HE++G+H
Sbjct: 40 HENAGLH 46




78|SequenceR|395|386|IAVDIDQHED

>sp|DPOZ_BPPMB|DNA polymerase DpoZ|Salmonella phage PMBT28

Query: 4 DIDQHE 9
D+DQHE
Sbjct: 382 DLDQHE 387


>sp|DPOZ_BPSHA|DNA polymerase DpoZ|Acinetobacter phage SH-Ab 15497

Query: 4 DIDQHE 9
D+DQHE
Sbjct: 383 DLDQHE 388




79|SequenceR|400|391|LLATLIAVDI

>sp|POL1_GCMV|RNA1 polyprotein|Grapevine chrome mosaic virus (GCMV)

Query: 2 LATLIAVDI 10
L+TL++VD+
Sbjct: 664 LSTLVSVDV 672


>sp|POL1_BRSV|RNA1 polyprotein|Beet ringspot virus (BRSV) (Tomato

Query: 2 LATLIAVDI 10
L+TL++VD+
Sbjct: 682 LSTLVSVDV 690




80|SequenceR|405|396|ANTGKLLATL

>sp|POLG_TEV|GENOME polyprotein|Tobacco etch virus (TEV)

Query: 2 NTGKLLATL 10
N GKLLA L
Sbjct: 382 NQGKLLAML 390


>sp|MVP_TEV|P3N-PIPO polyprotein|Tobacco etch virus (TEV)

Query: 2 NTGKLLATL 10
N GKLLA L
Sbjct: 382 NQGKLLAML 390


>sp|POLG_PEV9U|GENOME polyprotein|Porcine enterovirus 9 (strain UKG/410/73)

Query: 1 ANTGKLLAT 9
A TGK LAT
Sbjct: 1215 AGTGKSLAT 1223




81|SequenceR|410|401|QDFASANTGK

>sp|005R_FRG3G|UNCHARACTERIZED protein 005R|Frog virus 3 (isolate Goorha)

Query: 2 DFASANTGK 10
DF NTGK
Sbjct: 44 DFVKRNTGK 52


>sp|088R_FRG3G|PUTATIVE FAD-linked sulfhydryl oxidase 088R|Frog virus 3 (isolate Goorha)

Query: 2 DFASANTG 9
DF S NTG
Sbjct: 89 DFGSVNTG 96


>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)

Query: 1 QDFASANTGK 10
QDFA TG+
Sbjct: 1604 QDFAKITTGE 1613


>sp|L_RSVT|RNA-DIRECTED RNA polymerase L|Rice stripe virus (isolate T)

Query: 2 DFASANTGK 10
DF SAN K
Sbjct: 1056 DFVSANVSK 1064


>sp|VL2_HPV18|MINOR capsid protein L2|Human papillomavirus type 18

Query: 1 QDFASANTGK 10
Q FAS+ TG+
Sbjct: 198 QTFASSGTGE 207




82|SequenceR|415|406|LTLILQDFAS

***** No hits found ******


83|SequenceR|420|411|VRDWALTLIL

>sp|RPOA_EAVBU|REPLICASE polyprotein 1ab|Equine arteritis virus (strain Bucyrus)

Query: 1 VRDWALTL 8
VRDW+L L
Sbjct: 14 VRDWSLDL 21


>sp|CP84_BP186|UNCHARACTERIZED 37.8 kDa protein in|Escherichia phage 186 (Bacteriophage 186)

Query: 2 RDWALT 7
RDWA+T
Sbjct: 301 RDWAMT 306


>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7

Query: 1 VRDWALTL 8
VR+W +TL
Sbjct: 638 VREWQMTL 645


>sp|RL12_HCMVM|UNCHARACTERIZED protein RL12|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 WALTLI 9
WALTLI
Sbjct: 369 WALTLI 374


>sp|VP2_POVLY|MINOR capsid protein VP2|B-lymphotropic polyomavirus (LPV)

Query: 2 RDWALTLIL 10
+DW L LIL
Sbjct: 287 QDWMLPLIL 295


>sp|VP2_POVHA|MINOR capsid protein VP2|Hamster polyomavirus (HaPyV) (Mesocricetus

Query: 3 DWALTLIL 10
DW L LIL
Sbjct: 309 DWMLPLIL 316


>sp|VP2_POVSM|MINOR capsid protein VP2|Squirrel monkey polyomavirus

Query: 3 DWALTLIL 10
DW L LIL
Sbjct: 285 DWLLPLIL 292


>sp|VP2_BFPYV|MINOR capsid protein VP2|Budgerigar fledgling disease virus (BFPyV)

Query: 3 DWALTLIL 10
DW L LIL
Sbjct: 282 DWLLPLIL 289




84|SequenceR|425|416|NKAIDVRDWA

>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 1 NKAIDVRDW 9
N DVRDW
Sbjct: 1464 NCETDVRDW 1472


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 1 NKAIDVRDW 9
N DVRDW
Sbjct: 1461 NCETDVRDW 1469


>sp|POL1_TRSV|RNA1 polyprotein|Tobacco ringspot virus (TobRV) (TRSV)

Query: 3 AIDVRDW 9
A+D+R+W
Sbjct: 719 AVDIREW 725


>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 4 IDVRDW 9
IDV+DW
Sbjct: 734 IDVKDW 739


>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)

Query: 4 IDVRDW 9
+DVRDW
Sbjct: 221 LDVRDW 226


>sp|L_PIRVV|RNA-DIRECTED RNA polymerase L|Pirital mammarenavirus (isolate

Query: 5 DVRDW 9
DVRDW
Sbjct: 1454 DVRDW 1458


>sp|L_ALLVP|RNA-DIRECTED RNA polymerase L|Allpahuayo mammarenavirus (isolate

Query: 5 DVRDW 9
DVRDW
Sbjct: 1447 DVRDW 1451


>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain

Query: 1 NKAIDVRDW 9
N DV+DW
Sbjct: 1451 NTNTDVKDW 1459


>sp|POL2_SQMVM|RNA2 polyprotein|Squash mosaic virus (strain melon)

Query: 1 NKAIDVRDW 9
NKA+ R W
Sbjct: 926 NKALPARSW 934


>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United

Query: 1 NKAIDVRDW 9
NK+ DV DW
Sbjct: 628 NKSPDVFDW 636


>sp|L_LATVB|RNA-DIRECTED RNA polymerase L|Latino mammarenavirus (isolate Rat/Bolivia/MARU

Query: 4 IDVRDW 9
+DV+DW
Sbjct: 1481 LDVKDW 1486


>sp|YL076_MIMIV|PUTATIVE BTB/POZ domain-containing protein L76|Acanthamoeba polyphaga

Query: 1 NKAIDVRDW 9
N ID+ DW
Sbjct: 86 NDVIDIPDW 94


>sp|Y06C_BPT4|UNCHARACTERIZED 8.5 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 NKAIDVRDW 9
NKA+ +R W
Sbjct: 13 NKAVIIRQW 21




85|SequenceR|430|421|YVFVHNKAID

>sp|VG64_ICHVA|UNCHARACTERIZED protein ORF64|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 YVFVHNKAI 9
++F+HNK I
Sbjct: 444 FIFIHNKTI 452


>sp|L_DMSVA|RNA-DIRECTED RNA polymerase L|Drosophila melanogaster sigma virus (isolate

Query: 1 YVFVHNKAID 10
Y+F HN+ +D
Sbjct: 218 YMFDHNRMLD 227


>sp|GP16_BPLP2|BASEPLATE protein gp16|Lactococcus phage p2 (Lactococcus lactis

Query: 2 VFVHNKAID 10
VFV NKA D
Sbjct: 246 VFVKNKATD 254


>sp|GP16_BPLSK|BASEPLATE protein gp16|Lactococcus phage SK1 (Lactococcus lactis

Query: 2 VFVHNKAID 10
VFV NKA D
Sbjct: 246 VFVKNKATD 254


>sp|007R_IIV3|UNCHARACTERIZED protein 007R|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 VFVHNK 7
VFVHNK
Sbjct: 356 VFVHNK 361


>sp|CVC1_ELHVK|CAPSID vertex component 1|Elephantid herpesvirus 1 (isolate Asian

Query: 2 VFVHNKAI 9
VF+HNK I
Sbjct: 41 VFLHNKHI 48


>sp|RDRP_WCMVO|RNA replication protein|White clover mosaic virus (strain

Query: 2 VFVHNKAID 10
+F HN A+D
Sbjct: 161 LFFHNPALD 169


>sp|RDRP_WCMVM|RNA replication protein|White clover mosaic virus (strain

Query: 2 VFVHNKAID 10
+F HN A+D
Sbjct: 161 LFFHNPALD 169




86|SequenceR|435|426|LWQQGYVFVH

>sp|Y058_OSHVF|UNCHARACTERIZED protein ORF58|Ostreid herpesvirus 1 (isolate France)

Query: 2 WQQGYVFVH 10
W+ GY+F++
Sbjct: 93 WKTGYIFIY 101


>sp|OX2V_HHV6Z|PUTATIVE OX-2 membrane glycoprotein homolog|Human herpesvirus 6B (strain

Query: 5 GYVFVH 10
GYVF+H
Sbjct: 79 GYVFIH 84


>sp|V204_FOWPN|UNCHARACTERIZED serpin-like protein FPV204|Fowlpox virus (strain NVSL) (FPV)

Query: 1 LWQQGYVF 8
LW+ GY F
Sbjct: 193 LWKLGYAF 200


>sp|GP16_BPLSK|BASEPLATE protein gp16|Lactococcus phage SK1 (Lactococcus lactis

Query: 1 LWQQGYVF 8
LW+ GY++
Sbjct: 46 LWETGYLY 53


>sp|GP16_BPLP2|BASEPLATE protein gp16|Lactococcus phage p2 (Lactococcus lactis

Query: 1 LWQQGYVF 8
LW+ GY++
Sbjct: 46 LWETGYLY 53


>sp|VF205_IIV3|PUTATIVE DNA ligase 052L|Invertebrate iridescent virus 3 (IIV-3)

Query: 4 QGYVFV 9
QGYVFV
Sbjct: 654 QGYVFV 659


>sp|POL1_BBWV2|RNA1 polyprotein|Broad bean wilt virus 2

Query: 2 WQQGYVFV 9
WQ+ Y++V
Sbjct: 841 WQRAYLYV 848


>sp|VE6_HPV49|PROTEIN E6|Human papillomavirus type 49

Query: 1 LWQQGYVF 8
LW+ G+VF
Sbjct: 48 LWKDGFVF 55


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 4 QGYVFVH 10
QGY F+H
Sbjct: 108 QGYSFLH 114


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 4 QGYVFVH 10
QGY F+H
Sbjct: 108 QGYSFLH 114


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 4 QGYVFVH 10
QGY F+H
Sbjct: 108 QGYSFLH 114


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 4 QGYVFVH 10
QGY F+H
Sbjct: 108 QGYSFLH 114


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 4 QGYVFVH 10
QGY F+H
Sbjct: 108 QGYSFLH 114


>sp|S8_DPIRV|UNCHARACTERIZED protein S8|Diadromus pulchellus idnoreovirus 1 (DpIRV-1)

Query: 1 LWQQGYVFVH 10
L+ YV+VH
Sbjct: 117 LYTNNYVYVH 126


>sp|PG067_VARV|PROTEIN OPG067|Variola virus

Query: 1 LWQQGYVFV 9
LW GY F+
Sbjct: 16 LWLYGYNFI 24


>sp|PG067_VAR67|PROTEIN OPG067|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 LWQQGYVFV 9
LW GY F+
Sbjct: 16 LWLYGYNFI 24


>sp|PG067_VACCW|PROTEIN OPG067|Vaccinia virus (strain Western Reserve)

Query: 1 LWQQGYVFV 9
LW GY F+
Sbjct: 16 LWLYGYNFI 24


>sp|PG067_VACCC|PROTEIN OPG067|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 LWQQGYVFV 9
LW GY F+
Sbjct: 16 LWLYGYNFI 24


>sp|VEAC_BPP22|EAC protein|Salmonella phage P22 (Bacteriophage P22)

Query: 1 LWQQGYVF 8
+W++GY F
Sbjct: 65 VWEKGYEF 72




87|SequenceR|440|431|ELSGVLWQQG

>sp|L_BDVV|RNA-DIRECTED RNA polymerase L|Borna disease virus (strain V)

Query: 2 LSGVLWQQG 10
+ G LW+QG
Sbjct: 198 VQGALWEQG 206


>sp|L_BDV1|RNA-DIRECTED RNA polymerase L|Borna disease virus 1 (BoDV-1)

Query: 2 LSGVLWQQG 10
+ G LW+QG
Sbjct: 198 VQGALWEQG 206


>sp|VINT_BPP21|INTEGRASE phage P21 (Bacteriophage 21)

Query: 1 ELSGVLWQQG 10
E G+ W+QG
Sbjct: 317 EKCGIKWEQG 326


>sp|VL1_BPV1|MAJOR capsid protein L1|Bovine papillomavirus type 1

Query: 6 LWQQG 10
LWQQG
Sbjct: 3 LWQQG 7


>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)

Query: 2 LSGVLWQQG 10
L GV+W+ G
Sbjct: 452 LEGVVWRPG 460


>sp|VL1_BPV2|MAJOR capsid protein L1|Bos taurus papillomavirus 2 (Bovine

Query: 6 LWQQG 10
LWQQG
Sbjct: 3 LWQQG 7


>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)

Query: 2 LSGVLWQQG 10
L GV+W+ G
Sbjct: 451 LEGVVWRPG 459


>sp|POL_IPMAI|INTRACISTERNAL A-particle Pol-related polyprotein|Mouse intracisternal a-particle

Query: 3 SGVLWQQG 10
+ VLWQ G
Sbjct: 263 TAVLWQNG 270


>sp|C_MEASY|PROTEIN C|Measles virus (strain Yamagata-1) (MeV)

Query: 3 SGVLWQQG 10
SG LWQ G
Sbjct: 22 SGKLWQHG 29


>sp|C_MEASI|PROTEIN C|Measles virus (strain IP-3-Ca) (MeV)

Query: 3 SGVLWQQG 10
SG LWQ G
Sbjct: 22 SGKLWQHG 29


>sp|POL_IPMA|INTRACISTERNAL A-particle Pol-related polyprotein|Mouse intracisternal a-particle

Query: 3 SGVLWQQG 10
+ VLWQ G
Sbjct: 344 TAVLWQNG 351


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 2 LSGVLW 7
+SGVLW
Sbjct: 1078 ISGVLW 1083




88|SequenceR|445|436|DLMAQELSGV

>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)

Query: 1 DLMAQELSGV 10
D+MAQ+ GV
Sbjct: 618 DVMAQQTRGV 627




89|SequenceR|450|441|DMVLADLMAQ

***** No hits found ******


90|SequenceR|455|446|VFAVRDMVLA

***** No hits found ******


91|SequenceR|460|451|EILLKVFAVR

***** No hits found ******


92|SequenceR|465|456|MSVGNEILLK

>sp|VP4_ROTBS|OUTER capsid protein VP4|Rotavirus C (isolate

Query: 2 SVGNEILL 9
S GNEILL
Sbjct: 16 STGNEILL 23


>sp|VP4_ROTPC|OUTER capsid protein VP4|Rotavirus C (strain RVC/Pig/United

Query: 2 SVGNEIL 8
S+GNEIL
Sbjct: 16 SIGNEIL 22


>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5

Query: 1 MSVGNEILLK 10
+ VG+++LLK
Sbjct: 91 LDVGDDVLLK 100


>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2

Query: 1 MSVGNEILLK 10
+ VG+++LLK
Sbjct: 91 LDVGDDVLLK 100




93|SequenceR|470|461|TLFKHMSVGN

>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1 TLFKHMSVG 9
+LFKH++ G
Sbjct: 2383 SLFKHVAYG 2391


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 TLFKHMSVG 9
+LFKH++ G
Sbjct: 2383 SLFKHVAYG 2391


>sp|YL538_MIMIV|PUTATIVE ATP-dependent RNA helicase L538|Acanthamoeba polyphaga mimivirus

Query: 1 TLFKHMSV 8
T+FK+MSV
Sbjct: 91 TIFKNMSV 98




94|SequenceR|475|466|ELRPITLFKH

>sp|VE1_PCPV1|REPLICATION protein E1|Pygmy chimpanzee papillomavirus type 1

Query: 2 LRPITLFKH 10
++P+T+++H
Sbjct: 255 IQPLTIYRH 263




95|SequenceR|480|471|TNYLEELRPI

>sp|149L_IIV6|UNCHARACTERIZED protein 149L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 TNYLEELRP 9
TN+LE++RP
Sbjct: 300 TNFLEKIRP 308


>sp|MVP1_BYVU|MOVEMENT protein Hsp70h|Beet yellows virus (isolate Ukraine)

Query: 2 NYLEELRP 9
+YLE+L+P
Sbjct: 83 DYLEKLKP 90


>sp|MVP_PVYHU|P3N-PIPO polyprotein|Potato virus Y (strain Hungarian)

Query: 1 TNYLEELRP 9
+NY EE+ P
Sbjct: 503 SNYFEEIDP 511


>sp|POLG_PVYHU|GENOME polyprotein|Potato virus Y (strain Hungarian)

Query: 1 TNYLEELRP 9
+NY EE+ P
Sbjct: 503 SNYFEEIDP 511


>sp|POLN_SAV2|POLYPROTEIN P1234|Alphavirus salmon subtype 2 (SAV2)

Query: 3 YLEELRPI 10
YL+E RP+
Sbjct: 1758 YLQERRPV 1765


>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo

Query: 3 YLEELRPI 10
YL++L+P+
Sbjct: 781 YLDQLKPV 788


>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)

Query: 3 YLEELRPI 10
YL++L+P+
Sbjct: 782 YLDQLKPV 789


>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)

Query: 3 YLEELRPI 10
YL++L+P+
Sbjct: 781 YLDQLKPV 788


>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean

Query: 3 YLEELRPI 10
YL++L+P+
Sbjct: 783 YLDQLKPV 790


>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean

Query: 3 YLEELRPI 10
YL++L+P+
Sbjct: 781 YLDQLKPV 788


>sp|DPOL_ICHVA|DNA polymerase|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 TNYLEELRPI 10
T +LE L+P+
Sbjct: 988 TGHLEALKPV 997


>sp|Y038_OSHVF|PUTATIVE RING finger protein ORF38|Ostreid herpesvirus 1 (isolate France)

Query: 2 NYLEELRPI 10
NY++ +RP+
Sbjct: 100 NYVQHIRPL 108




96|SequenceR|485|476|TPGQKTNYLE

>sp|VG50_BPML5|PUTATIVE adenosylcobalamin-dependent ribonucleoside-triphosphate

Query: 1 TPGQKTNYLE 10
TP KT+YL+
Sbjct: 393 TPAGKTDYLD 402


>sp|POLG_FMDVI|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 PGQKTNYLE 10
PG+ TNYL+
Sbjct: 542 PGRFTNYLD 550


>sp|DPOL_CEV01|DNA polymerase|Chrysochromulina ericina virus (CeV01)

Query: 2 PGQKTNYLE 10
PG+K NY++
Sbjct: 311 PGKKENYID 319


>sp|POLG_FMDVT|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 PGQKTNYLE 10
PG+ TNYL+
Sbjct: 542 PGRFTNYLD 550


>sp|POLG_FMDVS|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 PGQKTNYLE 10
PG+ TNYL+
Sbjct: 542 PGRFTNYLD 550


>sp|PG068_VACCW|PROTEIN OPG068|Vaccinia virus (strain Western Reserve)

Query: 2 PGQKTNY 8
PG KT+Y
Sbjct: 226 PGDKTSY 232


>sp|PG068_VACCC|PROTEIN OPG068|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 PGQKTNY 8
PG KT+Y
Sbjct: 226 PGDKTSY 232


>sp|RDRP_LRVLG|PROBABLE RNA-directed RNA polymerase|Leishmania RNA virus 1 -

Query: 3 GQKTNYLE 10
G++TNY++
Sbjct: 689 GEQTNYIQ 696


>sp|PG068_MONPV|PROTEIN OPG068|Monkeypox virus (MPXV)

Query: 2 PGQKTNY 8
PG KT+Y
Sbjct: 226 PGDKTSY 232


>sp|PG068_VARV|PROTEIN OPG068|Variola virus

Query: 2 PGQKTNY 8
PG KT+Y
Sbjct: 226 PGDKTSY 232


>sp|PG068_VAR67|PROTEIN OPG068|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2 PGQKTNY 8
PG KT+Y
Sbjct: 226 PGDKTSY 232


>sp|POLG_FMDA1|GENOME polyprotein|Foot-and-mouth disease virus serotype Asia-1

Query: 2 PGQKTNYLE 10
PG+ TN+L+
Sbjct: 542 PGRFTNFLD 550




97|SequenceR|490|481|FLMPNTPGQK

>sp|VP6_APRVF|MICROTUBULE-ASSOCIATED protein VP6|Aedes pseudoscutellaris reovirus (isolate France)

Query: 1 FLMPNTPG 8
F++PN PG
Sbjct: 119 FVLPNVPG 126


>sp|ICP0_BHV1K|E3 ubiquitin-protein ligase ICP0|Bovine herpesvirus 1.2 (strain K22)

Query: 2 LMPNTPGQ 9
L+PNTPG
Sbjct: 175 LLPNTPGH 182


>sp|VP7_ROTGI|OUTER capsid glycoprotein VP7|Rotavirus B (isolate RVB/Rat/United

Query: 1 FLMPNTPG 8
FL P+ PG
Sbjct: 30 FLQPDNPG 37


>sp|RDRP_CMVIX|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain Ixora)

Query: 1 FLMPNTPGQ 9
L+PNTP +
Sbjct: 131 LLVPNTPNR 139




98|SequenceR|495|486|DRVLHFLMPN

>sp|SPIKE_BC512|SPIKE glycoprotein|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 DRVLHFLMPN 10
D+V HF +PN
Sbjct: 175 DKVYHFYVPN 184


>sp|B277_SSV1|UNCHARACTERIZED protein B-277|Sulfolobus spindle-shape virus 1 (SSV1)

Query: 4 LHFLMPN 10
+HF++PN
Sbjct: 161 VHFVLPN 167


>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain

Query: 2 RVLHFLMP 9
R HFLMP
Sbjct: 133 RYNHFLMP 140




99|SequenceR|500|491|NGQKVDRVLH

>sp|ETF2_RFVKA|EARLY transcription factor 82 kDa|Rabbit fibroma virus (strain Kasza)

Query: 2 GQKVDRVLH 10
GQK+ RVL+
Sbjct: 16 GQKIKRVLY 24


>sp|RDRP_RBDVR|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Raspberry bushy dwarf virus (isolate

Query: 2 GQKVDRVLH 10
G+K +R+LH
Sbjct: 755 GKKCERILH 763


>sp|AC83_NPVAC|CAPSID-ASSOCIATED protein AC83|Autographa californica nuclear polyhedrosis virus

Query: 3 QKVDRVLH 10
Q VDR++H
Sbjct: 102 QPVDRIVH 109


>sp|VP91_NPVBM|CAPSID-ASSOCIATED protein Vp91|Bombyx mori nuclear polyhedrosis virus

Query: 3 QKVDRVLH 10
Q VDR++H
Sbjct: 102 QPVDRIVH 109


>sp|TYSY_BPPHT|THYMIDYLATE synthase|Bacillus phage phi3T (Bacteriophage phi-3T)

Query: 1 NGQKVDRV 8
NG+KVD+V
Sbjct: 120 NGEKVDQV 127


>sp|REP_BPHC1|REPLICATION protein|Haemophilus phage HP1 (strain HP1c1)

Query: 1 NGQKVDRVL 9
NG K DR L
Sbjct: 33 NGHKFDRTL 41




100|SequenceR|505|496|YGPPLNGQKV

>sp|POL_SINV3|POLYPROTEIN invicta virus 3 (SINV-3)

Query: 1 YGPPLNGQKV 10
Y PPL+GQ+V
Sbjct: 434 YWPPLSGQRV 443


>sp|POLFS_SINV3|POLYPROTEIN-FSD invicta virus 3 (SINV-3)

Query: 1 YGPPLNGQKV 10
Y PPL+GQ+V
Sbjct: 434 YWPPLSGQRV 443


>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YGPPLNGQ 8
Y PP++GQ
Sbjct: 442 YAPPISGQ 449


>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YGPPLNGQ 8
Y PP++GQ
Sbjct: 432 YAPPISGQ 439


>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YGPPLNGQ 8
Y PP++GQ
Sbjct: 433 YAPPISGQ 440


>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YGPPLNGQ 8
Y PP++GQ
Sbjct: 435 YAPPISGQ 442


>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YGPPLNGQ 8
Y PP++GQ
Sbjct: 435 YAPPISGQ 442


>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YGPPLNGQ 8
Y PP++GQ
Sbjct: 435 YAPPISGQ 442


>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YGPPLNGQ 8
Y PP++GQ
Sbjct: 440 YAPPISGQ 447


>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YGPPLNGQ 8
Y PP++GQ
Sbjct: 430 YAPPISGQ 437


>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YGPPLNGQ 8
Y PP++GQ
Sbjct: 435 YAPPISGQ 442


>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YGPPLNGQ 8
Y PP+ GQ
Sbjct: 425 YAPPIQGQ 432


>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YGPPLNGQ 8
Y PP+ GQ
Sbjct: 431 YAPPITGQ 438


>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YGPPLNGQ 8
Y PP+ GQ
Sbjct: 429 YAPPIKGQ 436


>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YGPPLNGQ 8
Y PP+ GQ
Sbjct: 427 YAPPIKGQ 434


>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YGPPLNGQ 8
Y PP+ GQ
Sbjct: 434 YAPPIEGQ 441


>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YGPPLNGQ 8
Y PP+ GQ
Sbjct: 432 YAPPIEGQ 439


>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YGPPLNGQ 8
Y PP+ GQ
Sbjct: 429 YAPPIEGQ 436


>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YGPPLNGQ 8
Y PP+ GQ
Sbjct: 435 YAPPIEGQ 442


>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YGPPLNGQ 8
Y PP+ GQ
Sbjct: 447 YAPPIEGQ 454


>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YGPPLNGQ 8
Y PP+ GQ
Sbjct: 422 YAPPIRGQ 429


>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YGPPLNGQ 8
Y PP+ GQ
Sbjct: 434 YAPPIGGQ 441


>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YGPPLNGQ 8
Y PP+ GQ
Sbjct: 425 YAPPIRGQ 432


>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YGPPLNGQ 8
Y PP+ GQ
Sbjct: 436 YAPPIRGQ 443


>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YGPPLNGQ 8
Y PP+ GQ
Sbjct: 429 YAPPIRGQ 436


>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 YGPPLNGQ 8
Y PP+ GQ
Sbjct: 432 YAPPIGGQ 439


>sp|DPOL_WHV2|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 YGPPLNGQK 9
Y PPLN +K
Sbjct: 331 YSPPLNYEK 339


>sp|DPOL_WHV5|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 YGPPLNGQK 9
Y PPLN +K
Sbjct: 332 YSPPLNYEK 340


>sp|DPOL_WHV4|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 YGPPLNGQK 9
Y PPLN +K
Sbjct: 332 YSPPLNYEK 340


>sp|DPOL_WHV3|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 YGPPLNGQK 9
Y PPLN +K
Sbjct: 332 YSPPLNYEK 340


>sp|DPOL_WHV6|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 YGPPLNGQK 9
Y PPLN +K
Sbjct: 4 YSPPLNYEK 12


>sp|DPOL_WHV1|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 YGPPLNGQK 9
Y PPLN +K
Sbjct: 327 YSPPLNYEK 335


>sp|POLG_LMV0|GENOME polyprotein|Lettuce mosaic virus (strain 0

Query: 1 YGPPLNGQKV 10
+ PP+ G+K+
Sbjct: 2314 FRPPIKGEKI 2323


>sp|POLG_LMVE|GENOME polyprotein|Lettuce mosaic virus (strain E)

Query: 1 YGPPLNGQKV 10
+ PP+ G+K+
Sbjct: 2314 FRPPIKGEKI 2323


>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12

Query: 1 YGPPLN 6
+GPPLN
Sbjct: 564 WGPPLN 569


>sp|POL2_CNSV|RNA2 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 3 PPLNGQK 9
PPLNG +
Sbjct: 199 PPLNGDE 205


>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2

Query: 1 YGPPLN 6
+GPPLN
Sbjct: 700 WGPPLN 705


>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5

Query: 1 YGPPLN 6
+GPPLN
Sbjct: 700 WGPPLN 705


>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 3 PPLNGQKV 10
PP++G+K+
Sbjct: 471 PPVHGKKI 478


>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)

Query: 3 PPLNGQKV 10
PP++G+K+
Sbjct: 471 PPVHGKKI 478


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 3 PPLNGQKV 10
PP++G+K+
Sbjct: 471 PPVHGKKI 478


>sp|DPOL_WMHBV|PROTEIN P|Woolly monkey hepatitis B virus

Query: 2 GPPLNGQ 8
GPP+ GQ
Sbjct: 199 GPPVQGQ 205




101|SequenceR|510|501|ILTIKYGPPL

>sp|YL004_MIMIV|PUTATIVE KilA-N domain-containing protein L4|Acanthamoeba polyphaga

Query: 1 ILTIKYGP 8
ILTIKY P
Sbjct: 393 ILTIKYTP 400


>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41

Query: 2 LTIKYGPPL 10
+T+KY PPL
Sbjct: 202 VTLKYSPPL 210


>sp|L_LATVB|RNA-DIRECTED RNA polymerase L|Latino mammarenavirus (isolate Rat/Bolivia/MARU

Query: 2 LTIKYGPPL 10
L +KYGP L
Sbjct: 1224 LDLKYGPSL 1232


>sp|CAPSD_BYDVM|MAJOR capsid protein|Barley yellow dwarf virus (isolate

Query: 3 TIKYGPPL 10
TIK+GP L
Sbjct: 77 TIKFGPDL 84


>sp|RDRP_RGDV|RNA-DIRECTED RNA polymerase P1|Rice gall dwarf virus (RGDV)

Query: 3 TIKYGPPL 10
++KY PPL
Sbjct: 1000 SVKYYPPL 1007


>sp|CAPSD_TTVZ1|CAPSID protein|Torque teno douroucouli virus (isolate

Query: 2 LTIKYGPP 9
+TIK GPP
Sbjct: 208 VTIKIGPP 215


>sp|L_GOGV|RNA-DIRECTED RNA polymerase L|Alethinophid 1 reptarenavirus (isolate

Query: 1 ILTIKYGPP 9
++ IKYG P
Sbjct: 1042 LIAIKYGAP 1050


>sp|POL1_GFLV|RNA1 polyprotein|Grapevine fanleaf virus (GFLV)

Query: 2 LTIKYGPP 9
+ ++YGPP
Sbjct: 97 VVVQYGPP 104


>sp|NCAP_TPMV|NUCLEOPROTEIN paramyxovirus (TPMV)

Query: 1 ILTIKYG 7
ILT+KYG
Sbjct: 268 ILTLKYG 274


>sp|VIF_FIVT2|VIRION infectivity factor|Feline immunodeficiency virus (isolate TM2)

Query: 1 ILTIKYGPP 9
++ +KY PP
Sbjct: 190 LMCLKYSPP 198


>sp|NCAP_RINDR|NUCLEOPROTEIN virus (strain RBOK) (RDV)

Query: 1 ILTIKYG 7
ILTIK+G
Sbjct: 270 ILTIKFG 276


>sp|NCAP_PPRV|NUCLEOPROTEIN virus (PPRV)

Query: 1 ILTIKYG 7
ILTIK+G
Sbjct: 270 ILTIKFG 276


>sp|NCAP_PHODV|NUCLEOPROTEIN distemper virus (PDV)

Query: 1 ILTIKYG 7
ILTIK+G
Sbjct: 270 ILTIKFG 276


>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)

Query: 1 ILTIKYG 7
ILTIK+G
Sbjct: 270 ILTIKFG 276


>sp|NCAP_MEASC|NUCLEOPROTEIN virus (strain Ichinose-B95a) (MeV)

Query: 1 ILTIKYG 7
ILTIK+G
Sbjct: 270 ILTIKFG 276


>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)

Query: 1 ILTIKYG 7
ILTIK+G
Sbjct: 270 ILTIKFG 276


>sp|YL222_MIMIV|PUTATIVE SET domain-containing protein L222|Acanthamoeba polyphaga mimivirus

Query: 2 LTIKYGP 8
+TI YGP
Sbjct: 167 ITISYGP 173


>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)

Query: 1 ILTIKYG 7
ILTIK+G
Sbjct: 270 ILTIKFG 276


>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)

Query: 1 ILTIKYG 7
ILTIK+G
Sbjct: 270 ILTIKFG 276


>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)

Query: 1 ILTIKYG 7
ILTIK+G
Sbjct: 270 ILTIKFG 276


>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)

Query: 1 ILTIKYG 7
ILTIK+G
Sbjct: 270 ILTIKFG 276


>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)

Query: 1 ILTIKYG 7
ILTIK+G
Sbjct: 270 ILTIKFG 276


>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)

Query: 1 ILTIKYG 7
ILTIK+G
Sbjct: 270 ILTIKFG 276


>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)

Query: 1 ILTIKYG 7
ILTIK+G
Sbjct: 270 ILTIKFG 276


>sp|NCAP_RINDU|NUCLEOPROTEIN virus (strain Kuwait 82/1)

Query: 1 ILTIKYG 7
ILTIK+G
Sbjct: 270 ILTIKFG 276


>sp|NCAP_RINDL|NUCLEOPROTEIN virus (strain L) (RDV)

Query: 1 ILTIKYG 7
ILTIK+G
Sbjct: 270 ILTIKFG 276


>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)

Query: 1 ILTIKYG 7
ILTIK+G
Sbjct: 270 ILTIKFG 276


>sp|NCAP_CDVO|NUCLEOPROTEIN distemper virus (strain Onderstepoort)

Query: 1 ILTIKYG 7
ILTIK+G
Sbjct: 270 ILTIKFG 276


>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40

Query: 2 LTIKYGPPL 10
+ +KY PPL
Sbjct: 202 VALKYSPPL 210




102|SequenceR|515|506|VLGIDILTIK

>sp|L_MOKV|LARGE structural protein|Mokola virus (MOKV)

Query: 3 GIDILTIK 10
G+DI TIK
Sbjct: 82 GVDIATIK 89




103|SequenceR|520|511|MLYEIVLGID

>sp|TCB_FLV|VIRAL T-cell receptor beta chain-like|Feline leukemia virus

Query: 1 MLYEIVLG 8
+LYEI+LG
Sbjct: 291 ILYEILLG 298


>sp|YR818_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R818|Acanthamoeba polyphaga

Query: 1 MLYEIVLGI 9
MLY+ LGI
Sbjct: 1493 MLYQTALGI 1501


>sp|VF050_IIV6|UNCHARACTERIZED protein 050L|Invertebrate iridescent virus 6 (IIV-6)

Query: 3 YEIVLGID 10
Y+I++GID
Sbjct: 681 YKIMIGID 688




104|SequenceR|525|516|RYTGGMLYEI

>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 2 YTGGMLYEI 10
Y GG+LY+I
Sbjct: 1653 YCGGVLYKI 1661


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 2 YTGGMLYEI 10
Y GG+LY+I
Sbjct: 1660 YCGGVLYKI 1668


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 2 YTGGMLYEI 10
Y GG+LY+I
Sbjct: 1660 YCGGVLYKI 1668


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 2 YTGGMLYEI 10
Y GG+LY+I
Sbjct: 1656 YCGGVLYKI 1664


>sp|MVP_GRVMC|MOVEMENT protein|Groundnut rosette virus (strain MC1)

Query: 1 RYTGGMLY 8
R TGG+LY
Sbjct: 69 RNTGGLLY 76


>sp|CAPSD_PVSP|CAPSID protein|Potato virus S (strain Peruvian)

Query: 2 YTGGML 7
YTGGML
Sbjct: 274 YTGGML 279


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 2 YTGGMLYEI 10
Y GG+LY++
Sbjct: 1667 YCGGVLYKV 1675


>sp|TMP_BPHA1|PROBABLE tape measure protein|Halomonas phage phiHAP-1 (isolate -/Gulf

Query: 1 RYTGGMLYE 9
RY+G ML E
Sbjct: 476 RYSGSMLRE 484


>sp|YR502_MIMIV|UNCHARACTERIZED protein R502|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 YTGGMLYEI 10
YT G++YE+
Sbjct: 27 YTTGVVYEV 35


>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 1 RYTGGML 7
RYTGG++
Sbjct: 888 RYTGGLI 894


>sp|Y258_AFV2P|UNCHARACTERIZED protein ORF258|Acidianus filamentous virus 2 (isolate

Query: 2 YTGGMLYE 9
YTGG+ Y+
Sbjct: 62 YTGGLQYK 69




105|SequenceR|530|521|RTYTCRYTGG

>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN)

Query: 3 YTCRYTGG 10
Y C YTGG
Sbjct: 256 YGCDYTGG 263


>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT)

Query: 3 YTCRYTGG 10
Y C YTGG
Sbjct: 256 YGCDYTGG 263


>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)

Query: 3 YTCRYTGG 10
Y C YTGG
Sbjct: 256 YGCDYTGG 263


>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)

Query: 3 YTCRYTGG 10
Y C YTGG
Sbjct: 256 YGCDYTGG 263


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN)

Query: 3 YTCRYTGG 10
Y C YTGG
Sbjct: 256 YGCDYTGG 263


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT)

Query: 3 YTCRYTGG 10
Y C YTGG
Sbjct: 256 YGCDYTGG 263


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 3 YTCRYTGG 10
Y C YTGG
Sbjct: 256 YGCDYTGG 263


>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 1 RTYTCRYTGG 10
+++TC YTG
Sbjct: 118 QSWTCPYTGA 127


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 3 YTCRYTGG 10
Y C YTGG
Sbjct: 256 YGCDYTGG 263


>sp|POL_CERV|ENZYMATIC polyprotein|Carnation etched ring virus (CERV)

Query: 3 YTCRYTGG 10
Y CRY G
Sbjct: 554 YICRYASG 561


>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 1 RTYTCRYTGG 10
+++TC YTG
Sbjct: 118 QSWTCPYTGA 127


>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 1 RTYTCRYTGG 10
+++TC YTG
Sbjct: 118 QSWTCPYTGA 127


>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 1 RTYTCRYTGG 10
+++TC YTG
Sbjct: 118 QSWTCPYTGA 127


>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 1 RTYTCRYTGG 10
+++TC YTG
Sbjct: 118 QSWTCPYTGA 127


>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3

Query: 1 RTYTCRYTG 9
+++TC YTG
Sbjct: 116 QSWTCPYTG 124


>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3

Query: 1 RTYTCRYTG 9
+++TC YTG
Sbjct: 118 QSWTCPYTG 126


>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 1 RTYTCRYTGG 10
+++TC YTG
Sbjct: 118 QSWTCPYTGA 127


>sp|VG441_BPMD2|GENE 44.1 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 4 TCRYTGG 10
T RYTGG
Sbjct: 44 TVRYTGG 50


>sp|POL_CSVMV|PUTATIVE enzymatic polyprotein|Cassava vein mosaic virus (CsVMV)

Query: 3 YTCRYTGG 10
Y CRY G
Sbjct: 538 YLCRYNSG 545


>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)

Query: 3 YTCRYTGG 10
YTCR GG
Sbjct: 873 YTCRVFGG 880


>sp|B17_VARV|PROTEIN B17|Variola virus

Query: 3 YTCRYT 8
Y CRYT
Sbjct: 41 YMCRYT 46


>sp|B17_VAR67|PROTEIN B17|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3 YTCRYT 8
Y CRYT
Sbjct: 41 YMCRYT 46


>sp|YR476_MIMIV|PUTATIVE AAA family ATPase R476|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 RTYTC 5
RTYTC
Sbjct: 273 RTYTC 277


>sp|B17_VACCW|PROTEIN B17|Vaccinia virus (strain Western Reserve)

Query: 3 YTCRYT 8
Y CRYT
Sbjct: 41 YMCRYT 46


>sp|GAG_AVIER|GAG polyprotein|Avian erythroblastosis virus (strain ES4)

Query: 2 TYTCRYTG 9
TY+C Y G
Sbjct: 242 TYSCTYDG 249


>sp|B17_VACCC|PROTEIN B17|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 YTCRYT 8
Y CRYT
Sbjct: 41 YMCRYT 46


>sp|VL2_HPV41|MINOR capsid protein L2|Human papillomavirus type 41

Query: 4 TCRYTGG 10
TC+ TGG
Sbjct: 18 TCKATGG 24


>sp|DNBI_SUHV|MAJOR DNA-binding protein|Suid herpesvirus 1 (SuHV-1) (Pseudorabies

Query: 3 YTCRYTGG 10
+TC TGG
Sbjct: 1016 FTCSQTGG 1023


>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)

Query: 3 YTCRYTGG 10
Y RY+GG
Sbjct: 1961 YVSRYSGG 1968


>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 3 YTCRYTGG 10
Y RY+GG
Sbjct: 2013 YVSRYSGG 2020


>sp|P49_ASFK5|MINOR capsid protein p49|African swine fever virus (isolate

Query: 4 TCRYTG 9
TC YTG
Sbjct: 256 TCTYTG 261


>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 RTYTCRYTGG 10
+ YTCR T G
Sbjct: 281 QNYTCRVTHG 290


>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 RTYTCRYTGG 10
+ YTCR T G
Sbjct: 281 QNYTCRVTHG 290


>sp|FIBP_BPT4|LONG-TAIL fiber proximal subunit|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 RTYTCRYTGG 10
RT+T R TG
Sbjct: 937 RTFTIRNTGA 946


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 3 YTCRYTGG 10
Y RY+GG
Sbjct: 2013 YVSRYSGG 2020


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 3 YTCRYTGG 10
Y RY+GG
Sbjct: 1961 YVSRYSGG 1968


>sp|VLIP_GAHVM|VIRULENCE factor MDV010|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 RTYTC 5
RTYTC
Sbjct: 603 RTYTC 607


>sp|GLYDT_BPPAM|GLYCINYLTRANSFERASE phage PaMx11

Query: 3 YTCRYTGG 10
Y C Y GG
Sbjct: 47 YWCLYNGG 54


>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 TCRYTG 9
TCRY G
Sbjct: 213 TCRYRG 218


>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 TCRYTG 9
TCRY G
Sbjct: 213 TCRYRG 218




106|SequenceR|535|526|LRFRKRTYTC

>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 3 FRKRTYTC 10
F KRT TC
Sbjct: 1599 FLKRTLTC 1606


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 1 LRFRKRTYTC 10
L R+RT TC
Sbjct: 408 LGIRERTLTC 417




107|SequenceR|540|531|LSNYILRFRK

>sp|ICP27_MUHVS|MRNA export factor ICP27 homolog|Murid herpesvirus 1 (strain Smith)

Query: 2 SNYILRFRK 10
+NY+L FRK
Sbjct: 211 TNYLLLFRK 219


>sp|R1A_BCHK9|REPLICASE polyprotein 1a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 4 YILRFRK 10
Y+LRFR+
Sbjct: 2905 YLLRFRR 2911


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 4 YILRFRK 10
Y+LRFR+
Sbjct: 2905 YLLRFRR 2911


>sp|REN_PYMVV|REPLICATION enhancer protein|Potato yellow mosaic virus (isolate

Query: 2 SNYILRFRK 10
SNY+ RFR+
Sbjct: 80 SNYLARFRQ 88


>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote

Query: 1 LSNYILRFR 9
LSN+I R+R
Sbjct: 2244 LSNFIARYR 2252


>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)

Query: 3 NYILRFRK 10
NYIL +RK
Sbjct: 401 NYILCYRK 408


>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)

Query: 3 NYILRFRK 10
NYIL +RK
Sbjct: 401 NYILCYRK 408


>sp|Y057_HVAVE|UNCHARACTERIZED protein ORF57|Heliothis virescens ascovirus 3e (HvAV-3e)

Query: 1 LSNYILRFR 9
L+NY+LR +
Sbjct: 159 LTNYLLRLK 167


>sp|GLYC_EMARV|ENVELOPE glycoprotein|European mountain ash ringspot-associated virus

Query: 1 LSNYILRF 8
L NY+LRF
Sbjct: 109 LINYLLRF 116




108|SequenceR|545|536|RNNGGLSNYI

>sp|POLG_TMEVD|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 1 RNNGGLSNYI 10
+NNG LSN +
Sbjct: 123 QNNGQLSNIL 132


>sp|FIB11_BPE32|PROBABLE tail fiber protein|Escherichia phage Phieco32 (Escherichia coli

Query: 2 NNGGLSNYI 10
NN G +NYI
Sbjct: 608 NNSGTTNYI 616




109|SequenceR|550|541|NRGSRRNNGG

>sp|POLG_SMSV1|GENOME polyprotein|San Miguel sea lion virus

Query: 1 NRGSRRNNG 9
N+G R+N G
Sbjct: 1077 NKGPRKNTG 1085


>sp|POLG_VESVA|GENOME polyprotein|Vesicular exanthema of swine virus

Query: 1 NRGSRRNNG 9
N+G R+N G
Sbjct: 1077 NKGPRKNTG 1085


>sp|POLG_SMSV4|GENOME polyprotein|San Miguel sea lion virus

Query: 1 NRGSRRNNG 9
N+G+R+N G
Sbjct: 412 NKGARKNTG 420


>sp|POL1_ARMVN|RNA1 polyprotein|Arabis mosaic virus (isolate NW)

Query: 2 RGSRRNNGG 10
RG ++ NGG
Sbjct: 1891 RGFKKGNGG 1899


>sp|PORTL_BPBPP|PROBABLE portal protein|Bordetella phage BPP-1

Query: 1 NRGSRRNN 8
NRG +R+N
Sbjct: 48 NRGEKRHN 55


>sp|Y12K_BPPHH|UNCHARACTERIZED 12.3 kDa protein in|Halobacterium phage phiH (Bacteriophage

Query: 1 NRGSRRNNGG 10
NRGS R N G
Sbjct: 80 NRGSERTNQG 89




110|SequenceR|555|546|TSSSTNRGSR

>sp|CAPSD_HPBVH|CAPSID protein precursor|Human picobirnavirus (strain

Query: 2 SSSTNRGSR 10
SS TNRG++
Sbjct: 19 SSKTNRGTK 27




111|SequenceR|560|551|KRLQPTSSST

>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 1 KRLQPTS 7
KRLQPT+
Sbjct: 229 KRLQPTN 235




112|SequenceR|565|556|FSEHSKRLQP

>sp|YR541_MIMIV|PUTATIVE BTB/POZ domain-containing protein R541|Acanthamoeba polyphaga

Query: 1 FSEHSKRLQP 10
F+E++K L P
Sbjct: 104 FTEYNKHLDP 113


>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 4 HSKRLQP 10
HS RLQP
Sbjct: 1374 HSPRLQP 1380


>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 4 HSKRLQP 10
HS RLQP
Sbjct: 1374 HSPRLQP 1380


>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 4 HSKRLQP 10
HS RLQP
Sbjct: 1374 HSPRLQP 1380


>sp|YR380_MIMIV|PUTATIVE leucine-rich repeat protein R380|Acanthamoeba polyphaga mimivirus

Query: 1 FSEHSKRL 8
F EH+K+L
Sbjct: 349 FKEHTKKL 356


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)

Query: 1 FSEHSKRL 8
F EH+KR+
Sbjct: 1244 FPEHAKRI 1251


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 1 FSEHSKRL 8
F EH+KR+
Sbjct: 1244 FPEHAKRI 1251




113|SequenceR|570|561|DARNGFSEHS

>sp|POLG_FCVUR|GENOME polyprotein|Feline calicivirus (strain Cat/United

Query: 1 DARNGFSEH 9
+A NG SEH
Sbjct: 683 EAENGHSEH 691


>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1

Query: 4 NGFSEHS 10
NG+SEH+
Sbjct: 362 NGYSEHN 368


>sp|VF475_ASFM2|UNCHARACTERIZED protein B475L|African swine fever virus (isolate

Query: 2 ARNGFSEHS 10
A+NGFSE +
Sbjct: 349 AKNGFSEKA 357


>sp|VP7_WTV|NON-STRUCTURAL protein PNS7|Wound tumor virus (WTV)

Query: 1 DARNGFS 7
DARN FS
Sbjct: 498 DARNSFS 504




114|SequenceR|575|566|MKEKKDARNG

>sp|GP_HAZVJ|ENVELOPMENT polyprotein|Hazara virus (isolate JC280)

Query: 2 KEKKDAR 8
KEKKDAR
Sbjct: 1398 KEKKDAR 1404


>sp|ETF1_VAR67|EARLY transcription factor 70 kDa|Variola virus (isolate

Query: 1 MKEKKDARN 9
+K K+DARN
Sbjct: 572 IKNKEDARN 580


>sp|ETF1_VACCC|EARLY transcription factor 70 kDa|Vaccinia virus (strain Copenhagen)

Query: 1 MKEKKDARN 9
+K K+DARN
Sbjct: 572 IKNKEDARN 580


>sp|ETF1_VARV|EARLY transcription factor 70 kDa|Variola virus

Query: 1 MKEKKDARN 9
+K K+DARN
Sbjct: 572 IKNKEDARN 580


>sp|ETF1_VACCW|EARLY transcription factor 70 kDa|Vaccinia virus (strain Western Reserve)

Query: 1 MKEKKDARN 9
+K K+DARN
Sbjct: 572 IKNKEDARN 580


>sp|ETF1_VACCT|EARLY transcription factor 70 kDa|Vaccinia virus (strain Tian Tan)

Query: 1 MKEKKDARN 9
+K K+DARN
Sbjct: 572 IKNKEDARN 580


>sp|ETF1_VACCA|EARLY transcription factor 70 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1 MKEKKDARN 9
+K K+DARN
Sbjct: 572 IKNKEDARN 580


>sp|ETF1_MONPV|EARLY transcription factor 70 kDa|Monkeypox virus (MPXV)

Query: 1 MKEKKDARN 9
+K K+DARN
Sbjct: 572 IKNKEDARN 580


>sp|VP2_ROTS1|INNER capsid protein VP2|Rotavirus A (strain RVA/SA11-Both/G3P5B[2])

Query: 1 MKEKKDARN 9
M+EK+D++N
Sbjct: 20 MQEKEDSKN 28


>sp|VP2_ROTSR|INNER capsid protein VP2|Rotavirus A (strain RVA/SA11-Ramig/G3P[X])

Query: 1 MKEKKDARN 9
M+EK+D++N
Sbjct: 20 MQEKEDSKN 28


>sp|VP2_ROTSH|INNER capsid protein VP2|Rotavirus A (isolate RVA/Monkey/South

Query: 1 MKEKKDARN 9
M+EK+D++N
Sbjct: 20 MQEKEDSKN 28


>sp|YR403_MIMIV|UNCHARACTERIZED protein R403|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 KEKKDARN 9
K KKD+RN
Sbjct: 95 KPKKDSRN 102




115|SequenceR|580|571|FHNHRMKEKK

***** No hits found ******


116|SequenceR|585|576|QATKIFHNHR

>sp|L_TUPVT|RNA-DIRECTED RNA polymerase L|Tupaia virus (isolate Tupaia/Thailand/-/1986)

Query: 4 KIFHNHR 10
KIFH HR
Sbjct: 66 KIFHLHR 72


>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 TKIFHNHR 10
+KI H+HR
Sbjct: 433 SKILHHHR 440


>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)

Query: 3 TKIFHNHR 10
+KI H+HR
Sbjct: 432 SKILHHHR 439


>sp|PG074_VACCW|PROTEIN OPG074|Vaccinia virus (strain Western Reserve)

Query: 3 TKIFHNHR 10
+KI H+HR
Sbjct: 433 SKILHHHR 440


>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)

Query: 4 KIFHNHR 10
K+F NHR
Sbjct: 290 KLFKNHR 296


>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)

Query: 4 KIFHNHR 10
K+F NHR
Sbjct: 290 KLFKNHR 296


>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3 TKIFHNHR 10
+KI H+HR
Sbjct: 433 SKILHHHR 440


>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 QATKIFHNHR 10
+AT + H HR
Sbjct: 863 EATSLLHRHR 872


>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 QATKIFHNHR 10
+AT + H HR
Sbjct: 863 EATSLLHRHR 872


>sp|YR527_MIMIV|UNCHARACTERIZED protein R527|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 QATKIFHNH 9
+ TK+F+NH
Sbjct: 98 EITKLFNNH 106


>sp|EXO1_BPT5|PROBABLE exonuclease subunit 1|Escherichia phage T5 (Enterobacteria phage

Query: 5 IFHNH 9
IFHNH
Sbjct: 37 IFHNH 41




117|SequenceR|590|581|KPRYPQATKI

>sp|RDRP_P1AMV|RNA replication protein|Plantago asiatica mosaic potexvirus (P1AMV)

Query: 2 PRYPQATKI 10
PRYPQ T I
Sbjct: 126 PRYPQETII 134


>sp|CAPSD_AHV2H|CAPSID protein|Atkinsonella hypoxylon virus (isolate 2H)

Query: 2 PRYPQATKI 10
PRYPQ +++
Sbjct: 533 PRYPQISRL 541


>sp|VP4B_RRSVT|UNCHARACTERIZED protein VP4b|Rice ragged stunt virus (isolate

Query: 1 KPRYPQA 7
KPR+PQ+
Sbjct: 171 KPRHPQS 177


>sp|PRIM_BPT4|DNA primase|Enterobacteria phage T4 (Bacteriophage T4)

Query: 4 YPQATKI 10
YP+ATKI
Sbjct: 213 YPEATKI 219


>sp|RDRP_HASV|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Helicoverpa armigera stunt virus (HaSV)

Query: 3 RYPQATKI 10
RYPQ TK+
Sbjct: 1616 RYPQKTKL 1623


>sp|NER_BPD10|NEGATIVE regulator of transcription|Escherichia phage D108 (Bacteriophage

Query: 3 RYPQATKI 10
RYP+A KI
Sbjct: 49 RYPKAEKI 56


>sp|Y003_SIFVH|UNCHARACTERIZED protein 3|Sulfolobus islandicus filamentous virus (isolate

Query: 1 KPRYPQATKI 10
KPRYP+ +
Sbjct: 72 KPRYPEPNPV 81




118|SequenceR|595|586|MVTDIKPRYP

>sp|ENV_MLVCB|ENVELOPE glycoprotein|Cas-Br-E murine leukemia virus

Query: 2 VTDIKPRYP 10
VTD+ PR P
Sbjct: 259 VTDLGPRVP 267


>sp|Y003_SIFVH|UNCHARACTERIZED protein 3|Sulfolobus islandicus filamentous virus (isolate

Query: 5 IKPRYP 10
IKPRYP
Sbjct: 71 IKPRYP 76


>sp|FIBER_BPK1F|TAIL spike protein|Escherichia phage K1F (Bacteriophage K1F)

Query: 2 VTDIKPRYP 10
+TD+ P YP
Sbjct: 375 LTDLHPDYP 383


>sp|FIBER_BPK1E|TAIL spike protein|Escherichia phage K1E (Bacteriophage K1E)

Query: 2 VTDIKPRYP 10
+TD+ P YP
Sbjct: 165 LTDMHPDYP 173


>sp|CAP6_ADEG1|PRE-PROTEIN VI|Fowl adenovirus A serotype 1

Query: 1 MVTDIKP 7
MVT++KP
Sbjct: 160 MVTEVKP 166




119|SequenceR|600|591|KKGEEMVTDI

>sp|PORTL_BPSPP|PORTAL protein|Bacillus phage SPP1 (Bacteriophage SPP1)

Query: 1 KKGEEMVTDI 10
K EEMV+D+
Sbjct: 248 KNNEEMVSDL 257


>sp|DNBI_SHV21|MAJOR DNA-binding protein|Saimiriine herpesvirus 2 (strain 11)

Query: 3 GEEMVTDI 10
G E++TDI
Sbjct: 549 GSELITDI 556




120|SequenceR|605|596|DKTRKKKGEE

***** No hits found ******


121|SequenceR|610|601|IDVIEDKTRK

>sp|DTX_CORBE|DIPHTHERIA toxin|Corynephage beta

Query: 2 DVIEDKTR 9
DVI DKT+
Sbjct: 239 DVIRDKTK 246


>sp|DTX_COROM|DIPHTHERIA toxin|Corynephage omega

Query: 2 DVIEDKTR 9
DVI DKT+
Sbjct: 232 DVIRDKTK 239


>sp|DTXH_CORBE|DIPHTHERIA toxin homolog CRM228|Corynephage beta

Query: 2 DVIEDKTR 9
DVI DKT+
Sbjct: 232 DVIRDKTK 239




122|SequenceR|615|606|TEPDDIDVIE

>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 TEPDDID 7
TEPDD+D
Sbjct: 173 TEPDDVD 179


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 1 TEPDDID 7
+EPDDID
Sbjct: 179 SEPDDID 185


>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus

Query: 1 TEPDDIDVIE 10
+EP+D DV++
Sbjct: 561 SEPEDFDVVQ 570


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 TEPDDID 7
TEP+DID
Sbjct: 172 TEPEDID 178


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 TEPDDID 7
TEP+DID
Sbjct: 172 TEPEDID 178


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 TEPDDID 7
TEP+DID
Sbjct: 172 TEPEDID 178


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 TEPDDID 7
TEP+DID
Sbjct: 172 TEPEDID 178


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 TEPDDID 7
TEP+DID
Sbjct: 172 TEPEDID 178


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 2 EPDDID 7
EPDDID
Sbjct: 178 EPDDID 183


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 2 EPDDID 7
EPDDID
Sbjct: 178 EPDDID 183


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 2 EPDDID 7
EPDDID
Sbjct: 178 EPDDID 183


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 2 EPDDID 7
EPDDID
Sbjct: 178 EPDDID 183


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 2 EPDDID 7
EPDDID
Sbjct: 178 EPDDID 183


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 2 EPDDID 7
EPDDID
Sbjct: 178 EPDDID 183


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 2 EPDDID 7
EPDDID
Sbjct: 178 EPDDID 183


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 2 EPDDID 7
EPDDID
Sbjct: 178 EPDDID 183


>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)

Query: 2 EPDDID 7
EPDDID
Sbjct: 178 EPDDID 183


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 2 EPDDID 7
EPDDID
Sbjct: 178 EPDDID 183


>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)

Query: 2 EPDDID 7
EPDDID
Sbjct: 174 EPDDID 179


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 2 EPDDID 7
EPDD+D
Sbjct: 183 EPDDVD 188


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 2 EPDDID 7
EPDD+D
Sbjct: 183 EPDDVD 188


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 2 EPDDID 7
EPDD+D
Sbjct: 183 EPDDVD 188


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2 EPDDID 7
EPDD+D
Sbjct: 174 EPDDVD 179


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2 EPDDID 7
EPDD+D
Sbjct: 174 EPDDVD 179


>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2 EPDDID 7
EPDD+D
Sbjct: 174 EPDDVD 179


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 3 PDDIDVIE 10
PDDI+ IE
Sbjct: 3163 PDDIESIE 3170


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 2 EPDDID 7
EPDD+D
Sbjct: 174 EPDDLD 179


>sp|RPOL_BPT3|DNA-DIRECTED RNA polymerase|Enterobacteria phage T3 (Bacteriophage T3)

Query: 2 EPDDIDVIE 10
+PDDID E
Sbjct: 364 KPDDIDTNE 372


>sp|Y14F_BPT4|UNCHARACTERIZED 24.6 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 4 DDIDVIE 10
DD+DVIE
Sbjct: 71 DDLDVIE 77


>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 4 DDIDVIE 10
DD DVIE
Sbjct: 1468 DDFDVIE 1474


>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)

Query: 4 DDIDVIE 10
DD DVIE
Sbjct: 1469 DDFDVIE 1475


>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)

Query: 4 DDIDVIE 10
DD DVIE
Sbjct: 1416 DDFDVIE 1422


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 4 DDIDVIE 10
DD DVIE
Sbjct: 1468 DDFDVIE 1474


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 4 DDIDVIE 10
DD DVIE
Sbjct: 1469 DDFDVIE 1475


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 4 DDIDVIE 10
DD DVIE
Sbjct: 1416 DDFDVIE 1422


>sp|RPOL_BPK11|DNA-DIRECTED RNA polymerase|Enterobacteria phage K11 (Bacteriophage K11)

Query: 3 PDDIDVIE 10
PDDID E
Sbjct: 387 PDDIDTNE 394


>sp|UL32_SHV21|PACKAGING protein UL32|Saimiriine herpesvirus 2 (strain 11)

Query: 1 TEPDDIDVIE 10
T P+DID+ +
Sbjct: 236 TYPEDIDICQ 245


>sp|YR558_MIMIV|UNCHARACTERIZED protein R558|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 EPDDIDVIE 10
EPDDID I+
Sbjct: 281 EPDDIDSID 289


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 2 EPDDIDV 8
EP+D+D+
Sbjct: 1835 EPEDVDI 1841




123|SequenceR|620|611|YPFRKTEPDD

>sp|POL_SIVSP|GAG-POL polyprotein|Simian immunodeficiency virus (isolate PBj14/BCL-3)

Query: 2 PFRKTEPD 9
PFRK PD
Sbjct: 767 PFRKANPD 774


>sp|POL_SIVM1|GAG-POL polyprotein|Simian immunodeficiency virus (isolate Mm142-83)

Query: 2 PFRKTEPD 9
PFRK PD
Sbjct: 766 PFRKANPD 773


>sp|POL_SIVM2|GAG-POL polyprotein|Simian immunodeficiency virus (isolate Mm251)

Query: 2 PFRKTEPD 9
PFRK PD
Sbjct: 766 PFRKANPD 773


>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 PFRKTEPD 9
PFRK PD
Sbjct: 782 PFRKANPD 789


>sp|POL_SIVS4|GAG-POL polyprotein|Simian immunodeficiency virus (isolate F236/smH4)

Query: 2 PFRKTEPD 9
PFRK PD
Sbjct: 767 PFRKANPD 774


>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 PFRKTEPD 9
PFRK PD
Sbjct: 780 PFRKANPD 787


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 PFRKTEPD 9
PFRK PD
Sbjct: 780 PFRKANPD 787


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 PFRKTEPD 9
PFRK PD
Sbjct: 781 PFRKANPD 788


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 PFRKTEPD 9
PFRK PD
Sbjct: 781 PFRKANPD 788


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 PFRKTEPD 9
PFRK PD
Sbjct: 781 PFRKANPD 788


>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 PFRKTEPD 9
PFRK PD
Sbjct: 759 PFRKQNPD 766


>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 PFRKTEPD 9
PFRK PD
Sbjct: 757 PFRKQNPD 764


>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 PFRKTEPD 9
PFRK PD
Sbjct: 769 PFRKQNPD 776


>sp|POL_SIVTN|GAG-POL polyprotein|Simian immunodeficiency virus (isolate TAN1)

Query: 2 PFRKTEPD 9
PFRK PD
Sbjct: 784 PFRKEHPD 791


>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 PFRKTEPD 9
PFRK PD
Sbjct: 761 PFRKQNPD 768


>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 PFRKTEPD 9
PFRK PD
Sbjct: 757 PFRKQNPD 764


>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 PFRKTEPD 9
PFRK PD
Sbjct: 769 PFRKQNPD 776


>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 PFRKTEPD 9
PFRK PD
Sbjct: 757 PFRKQNPD 764


>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 PFRKTEPD 9
PFRK PD
Sbjct: 757 PFRKQNPD 764


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 PFRKTEPD 9
PFRK PD
Sbjct: 763 PFRKQNPD 770


>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 PFRKTEPD 9
PFRK PD
Sbjct: 757 PFRKQNPD 764


>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 PFRKTEPD 9
PFRK PD
Sbjct: 756 PFRKQNPD 763


>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 PFRKTEPD 9
PFR+ PD
Sbjct: 752 PFRRKNPD 759


>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 PFRKTEPD 9
PF+K PD
Sbjct: 769 PFKKQNPD 776


>sp|PG164_MONPV|PROTEIN OPG164|Monkeypox virus (MPXV)

Query: 2 PFRKTEPDD 10
PFR+ DD
Sbjct: 199 PFRRAHSDD 207


>sp|POL_SIVCZ|GAG-POL polyprotein|Simian immunodeficiency virus (isolate CPZ

Query: 2 PFRKTEPD 9
PFR+ PD
Sbjct: 706 PFREKNPD 713


>sp|PG164_VAR67|PROTEIN OPG164|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2 PFRKTEPDD 10
PFR+ DD
Sbjct: 190 PFRRAHSDD 198


>sp|PG164_VACCW|PROTEIN OPG164|Vaccinia virus (strain Western Reserve)

Query: 2 PFRKTEPDD 10
PFR+ DD
Sbjct: 191 PFRRAHSDD 199


>sp|PG164_VACCC|PROTEIN OPG164|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 PFRKTEPDD 10
PFR+ DD
Sbjct: 191 PFRRAHSDD 199


>sp|YR658_MIMIV|UNCHARACTERIZED protein R658|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 YPFRKTEPDD 10
YP RKT D+
Sbjct: 87 YPLRKTGYDN 96


>sp|RDRP_NCBVS|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Nudaurelia capensis beta virus (isolate

Query: 2 PFRKTEPD 9
PFR EP+
Sbjct: 958 PFRTAEPE 965




124|SequenceR|625|616|LENLPYPFRK

>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain

Query: 1 LENLPYPFR 9
+ENLP+ +R
Sbjct: 99 IENLPFQYR 107


>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)

Query: 1 LENLPYPFR 9
+ENLP+ +R
Sbjct: 99 IENLPFQYR 107


>sp|MCP_EHV2|MAJOR capsid protein|Equine herpesvirus 2 (strain 86/87)

Query: 1 LENLPYPF 8
+EN PYP+
Sbjct: 6 IENRPYPY 13


>sp|VE5_HPV42|PROBABLE protein E5|Human papillomavirus 42

Query: 1 LENLPYP 7
L+N PYP
Sbjct: 39 LQNYPYP 45


>sp|MCP_SHV21|MAJOR capsid protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 LENLPYPF 8
+EN PYP+
Sbjct: 3 VENRPYPY 10


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 3 NLPYPFR 9
N+P PFR
Sbjct: 1218 NMPTPFR 1224


>sp|CAPSD_TTVE1|CAPSID protein|Torque teno tamarin virus (isolate

Query: 2 ENLPYPFRK 10
+NLP+P +K
Sbjct: 104 DNLPWPIKK 112


>sp|TIPJ_BPSE4|TIP attachment protein J|Escherichia phage SECphi4

Query: 1 LENLPYP 7
L N+PYP
Sbjct: 782 LTNVPYP 788


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 1 LENLPYPF 8
LEN P+P+
Sbjct: 260 LENEPWPY 267


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 1 LENLPYPF 8
LEN P+P+
Sbjct: 261 LENEPWPY 268


>sp|SPIKE_ADE04|FIBER protein|Human adenovirus E serotype 4

Query: 1 LENLPYPF 8
+EN PY F
Sbjct: 110 MENYPYKF 117


>sp|PG142_VARV|CORE protein OPG142|Variola virus

Query: 2 ENLPYPFR 9
EN+P PFR
Sbjct: 82 ENIPPPFR 89


>sp|PG142_VAR67|CORE protein OPG142|Variola virus (isolate Human/India/Ind3/1967)

Query: 2 ENLPYPFR 9
EN+P PFR
Sbjct: 82 ENIPPPFR 89


>sp|PG142_VACCW|CORE protein OPG142|Vaccinia virus (strain Western Reserve)

Query: 2 ENLPYPFR 9
EN+P PFR
Sbjct: 82 ENIPPPFR 89


>sp|PG142_VACCC|CORE protein OPG142|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 ENLPYPFR 9
EN+P PFR
Sbjct: 82 ENIPPPFR 89


>sp|PG142_VACCA|CORE protein OPG142|Vaccinia virus (strain Ankara) (VACV)

Query: 2 ENLPYPFR 9
EN+P PFR
Sbjct: 82 ENIPPPFR 89


>sp|PG142_MONPV|CORE protein OPG142|Monkeypox virus (MPXV)

Query: 2 ENLPYPFR 9
EN+P PFR
Sbjct: 82 ENIPPPFR 89


>sp|ICP46_IIV6|IMMEDIATE-EARLY protein ICP-46 homolog|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 LENLPYPFR 9
++NL +PFR
Sbjct: 264 VQNLSFPFR 272


>sp|SPIKE_BEV|SPIKE glycoprotein|Berne virus (BEV)

Query: 2 ENLPYPF 8
E +PYPF
Sbjct: 32 EPVPYPF 38


>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)

Query: 1 LENLPYPFR 9
+EN+P+ +R
Sbjct: 98 IENIPFQYR 106


>sp|DNRE_BPT4|DNA replication protein|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 LENLPYPFRK 10
L+NL Y FRK
Sbjct: 380 LKNLIYLFRK 389


>sp|MATA_BPPP7|MATURATION protein A|Pseudomonas phage PP7 (Bacteriophage PP7)

Query: 1 LENLPYPF 8
LE PYPF
Sbjct: 62 LECTPYPF 69




125|SequenceR|630|621|CAWILLENLP

>sp|YL484_MIMIV|PUTATIVE ankyrin repeat protein L484|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 CAWILLENLP 10
C ILL NLP
Sbjct: 680 CISILLRNLP 689


>sp|VE5_HPV42|PROBABLE protein E5|Human papillomavirus 42

Query: 1 CAWILLENLP 10
C WI L+N P
Sbjct: 34 CVWISLQNYP 43


>sp|LTP_SHV21|LARGE tegument protein deneddylase|Saimiriine herpesvirus 2 (strain 11)

Query: 2 AWILLENLP 10
AWI E LP
Sbjct: 1583 AWIWTETLP 1591


>sp|126R_IIV6|UNCHARACTERIZED protein 126R|Invertebrate iridescent virus 6 (IIV-6)

Query: 4 ILLENLP 10
IL+ENLP
Sbjct: 267 ILIENLP 273


>sp|VNS2_AQRVG|NON-STRUCTURAL protein 2|Aquareovirus G (isolate American grass

Query: 1 CAWILLENLP 10
C+ LLEN P
Sbjct: 17 CSLRLLENFP 26


>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 CAWILLENLP 10
C W L ++LP
Sbjct: 270 CWWRLFDSLP 279


>sp|POLG_GSMV|GENOME polyprotein|Gloriosa stripe mosaic virus (GSMV)

Query: 3 WILLEN 8
W++LEN
Sbjct: 9 WVMLEN 14


>sp|B2_NODAM|PROTEIN B2|Nodamura virus (strain Mag115) (NoV)

Query: 1 CAWILLENLP 10
CA+ L+++LP
Sbjct: 6 CAYELIKSLP 15


>sp|VF467_IIV6|UNCHARACTERIZED protein 467R|Invertebrate iridescent virus 6 (IIV-6)

Query: 3 WILLENL 9
WIL EN+
Sbjct: 303 WILTENI 309


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 3 WILLENL 9
WI LEN+
Sbjct: 2109 WITLENI 2115




126|SequenceR|635|626|QRKMLCAWIL

>sp|TYSY_SHV21|THYMIDYLATE synthase|Saimiriine herpesvirus 2 (strain 11)

Query: 1 QRKMLCAW 8
+R ++CAW
Sbjct: 156 RRMLMCAW 163


>sp|TYSY_HSVAT|THYMIDYLATE synthase|Herpesvirus ateles

Query: 1 QRKMLCAW 8
+R ++CAW
Sbjct: 152 RRMLMCAW 159


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 1 QRKMLCAWIL 10
+ +M+C W+L
Sbjct: 1012 EDEMVCKWLL 1021


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 1 QRKMLCAWIL 10
+ +M+C W+L
Sbjct: 1012 EDEMVCKWLL 1021


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 1 QRKMLCAWIL 10
+ +M+C W+L
Sbjct: 1012 EDEMVCKWLL 1021


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 1 QRKMLCAWIL 10
+ +M+C W+L
Sbjct: 1012 EDEMVCKWLL 1021


>sp|YO35_BPHC1|UNCHARACTERIZED 58.7 kDa protein in|Haemophilus phage HP1 (strain HP1c1)

Query: 5 LCAWI 9
LCAWI
Sbjct: 102 LCAWI 106


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 2 RKMLCAWIL 10
R +LC W L
Sbjct: 2296 RSVLCQWCL 2304


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 2 RKMLCAWIL 10
R +LC W L
Sbjct: 2303 RSVLCQWCL 2311


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 2 RKMLCAWIL 10
R +LC W L
Sbjct: 2296 RSVLCQWCL 2304


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 2 RKMLCAWIL 10
R +LC W L
Sbjct: 2303 RSVLCQWCL 2311


>sp|VG43_ICHVA|UNCHARACTERIZED protein ORF43|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 QRKMLCAWI 9
+ KM+CA+I
Sbjct: 39 ENKMICAFI 47


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 2 RKMLCAWI 9
++ LCAW+
Sbjct: 1088 KEKLCAWL 1095


>sp|NS1_MUMIP|INITIATOR protein NS1|Murine minute virus (strain MVM

Query: 4 MLCAWIL 10
M+CAW++
Sbjct: 533 MICAWLV 539


>sp|NS1_MUMIM|INITIATOR protein NS1|Murine minute virus (strain MVMi)

Query: 4 MLCAWIL 10
M+CAW++
Sbjct: 533 MICAWLV 539


>sp|NS1A_ANV1|NON-STRUCTURAL polyprotein 1A|Avian nephritis virus 1 (ANV-1)

Query: 3 KMLCAWIL 10
K LC WI
Sbjct: 188 KTLCLWIF 195


>sp|NS1AB_ANV1|NON-STRUCTURAL polyprotein 1AB|Avian nephritis virus 1 (ANV-1)

Query: 3 KMLCAWIL 10
K LC WI
Sbjct: 188 KTLCLWIF 195


>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 1 QRKMLCAW 8
+ K+LC+W
Sbjct: 1461 KTKLLCSW 1468


>sp|MU2_REOVJ|MICROTUBULE-ASSOCIATED protein mu-2|Reovirus type 2 (strain D5/Jones)

Query: 2 RKMLCAWI 9
R M+C W+
Sbjct: 593 RLMICPWL 600


>sp|NS1_PAVL3|INITIATOR protein NS1|Parvovirus LuIII

Query: 4 MLCAWIL 10
M+CAW++
Sbjct: 533 MICAWLV 539


>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3 KMLCAWIL 10
K LC+WI+
Sbjct: 244 KALCSWII 251


>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3 KMLCAWIL 10
K LC+WI+
Sbjct: 244 KALCSWII 251


>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3 KMLCAWIL 10
K LC+WI+
Sbjct: 244 KALCSWII 251


>sp|GM_HHV2H|ENVELOPE glycoprotein M|Human herpesvirus 2 (strain HG52)

Query: 5 LCAWIL 10
+CAW+L
Sbjct: 145 VCAWLL 150


>sp|GM_SUHV|ENVELOPE glycoprotein M|Suid herpesvirus 1 (SuHV-1) (Pseudorabies

Query: 5 LCAWIL 10
LCAW L
Sbjct: 138 LCAWTL 143


>sp|L_AMPV1|RNA-DIRECTED RNA polymerase L|Avian metapneumovirus (isolate Canada

Query: 1 QRKMLCAW 8
+ K+LC W
Sbjct: 1461 KTKLLCGW 1468




127|SequenceR|640|631|FRAMVQRKML

>sp|POLG_FMDV5|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 FRAMVQRKM 9
++AMVQRK+
Sbjct: 192 WKAMVQRKL 200




128|SequenceR|645|636|GHQWLFRAMV

>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3 QWLFRA 8
QW+FRA
Sbjct: 249 QWMFRA 254


>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3 QWLFRA 8
QW+FRA
Sbjct: 249 QWMFRA 254


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3 QWLFRA 8
QW+FRA
Sbjct: 249 QWMFRA 254


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3 QWLFRA 8
QW+FRA
Sbjct: 249 QWMFRA 254


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 GHQWLFR 7
GHQW ++
Sbjct: 945 GHQWTYK 951


>sp|POL_WDSV|GAG-POL polyprotein|Walleye dermal sarcoma virus (WDSV)

Query: 1 GHQWLFRAMV 10
GH W+ R V
Sbjct: 1302 GHLWMHRGFV 1311


>sp|Y167_ABVP|UNCHARACTERIZED protein ORF167|Acidianus bottle-shaped virus (isolate

Query: 3 QWLFRAMV 10
+WL+RA++
Sbjct: 22 KWLYRAII 29


>sp|HELIC_BPT3|DNA helicase/primase|Enterobacteria phage T3 (Bacteriophage T3)

Query: 1 GHQWLF 6
GH+W F
Sbjct: 30 GHEWCF 35


>sp|NCAP_THOGV|NUCLEOPROTEIN virus (isolate SiAr 126)

Query: 3 QWLFRAM 9
+W+F+AM
Sbjct: 274 EWVFKAM 280


>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate

Query: 3 QWLFRAM 9
+W+FRA+
Sbjct: 145 EWIFRAL 151


>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)

Query: 1 GHQWL 5
GHQWL
Sbjct: 221 GHQWL 225


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 1 GHQWL 5
GHQWL
Sbjct: 221 GHQWL 225


>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain

Query: 4 WLFRAMV 10
WL+R+M+
Sbjct: 499 WLYRSMI 505




129|SequenceR|650|641|AMSEEGHQWL

>sp|GL_HHV7J|ENVELOPE glycoprotein L|Human herpesvirus 7 (strain JI)

Query: 3 SEEGHQWL 10
SE GH WL
Sbjct: 109 SESGHNWL 116


>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)

Query: 2 MSEEGHQWL 10
++ GHQWL
Sbjct: 217 LTGRGHQWL 225


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 1 AMSEEGHQW 9
AM EE H+W
Sbjct: 2933 AMFEEQHKW 2941


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 2 MSEEGHQWL 10
++ GHQWL
Sbjct: 217 LTGRGHQWL 225


>sp|TEG5_BHV1C|TEGUMENT protein UL47|Bovine herpesvirus 1.1 (strain Cooper)

Query: 1 AMSEEGHQWL 10
A++E G +WL
Sbjct: 492 ALAERGLRWL 501


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5 EGHQW 9
+GHQW
Sbjct: 944 QGHQW 948




130|SequenceR|655|646|AVLAKAMSEE

***** No hits found ******


131|SequenceR|660|651|RYIKCAVLAK

>sp|L_RSVT|RNA-DIRECTED RNA polymerase L|Rice stripe virus (isolate T)

Query: 2 YIKCAVLAK 10
Y+KC V +K
Sbjct: 2553 YLKCVVFSK 2561




132|SequenceR|665|656|EYAMSRYIKC

>sp|VP03_EHV2|PROBABLE membrane antigen 3|Equine herpesvirus 2 (strain 86/87)

Query: 1 EYAMSRYIKC 10
EY S+YI C
Sbjct: 965 EYLRSKYILC 974


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 1 EYAMSRYIKC 10
+Y+M+ YI C
Sbjct: 514 KYSMAGYITC 523


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 1 EYAMSRYIKC 10
+Y+M+ YI C
Sbjct: 514 KYSMAGYITC 523


>sp|VF199_ASFK5|INNER membrane protein E199L|African swine fever virus (isolate

Query: 1 EYAMSRYIKC 10
EYA S+Y C
Sbjct: 68 EYAYSQYCAC 77


>sp|VF199_ASFB7|INNER membrane protein E199L|African swine fever virus (strain

Query: 1 EYAMSRYIKC 10
EYA S+Y C
Sbjct: 68 EYAYSQYCAC 77


>sp|VF199_ASFP4|INNER membrane protein E199L|African swine fever virus (isolate

Query: 1 EYAMSRYIKC 10
EYA S+Y C
Sbjct: 68 EYAYSQYCAC 77


>sp|VF199_ASFM2|INNER membrane protein E199L|African swine fever virus (isolate

Query: 1 EYAMSRYIKC 10
EYA S+Y C
Sbjct: 68 EYAYSQYCAC 77


>sp|VF199_ASFWA|INNER membrane protein E199L|African swine fever virus (isolate

Query: 1 EYAMSRYIKC 10
EYA S+Y C
Sbjct: 68 EYAYSQYCAC 77


>sp|VIF_SIVV1|VIRION infectivity factor|Simian immunodeficiency virus agm.vervet

Query: 2 YAMSRYI 8
Y MSRY+
Sbjct: 51 YTMSRYV 57


>sp|V238_FOWPN|UNCHARACTERIZED protein FPV238|Fowlpox virus (strain NVSL) (FPV)

Query: 1 EYAMSRYIKC 10
+Y +SR+IK
Sbjct: 21 KYTLSRFIKL 30


>sp|VIF_SIVVT|VIRION infectivity factor|Simian immunodeficiency virus agm.vervet

Query: 2 YAMSRYI 8
Y MSRY+
Sbjct: 51 YTMSRYV 57




133|SequenceR|670|661|DSQKAEYAMS

>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 DSQKAEYAM 9
D QK EYA+
Sbjct: 168 DKQKKEYAL 176




134|SequenceR|675|666|TDDVLDSQKA

>sp|NPH2_RFVKA|RNA helicase NPH-II|Rabbit fibroma virus (strain Kasza)

Query: 1 TDDVLDSQKA 10
TDD LD+ K+
Sbjct: 611 TDDALDAIKS 620


>sp|NPH2_MYXVL|RNA helicase NPH-II|Myxoma virus (strain Lausanne) (MYXV)

Query: 1 TDDVLDSQKA 10
TDD LD+ K+
Sbjct: 611 TDDALDAIKS 620


>sp|DTX_CORBE|DIPHTHERIA toxin|Corynephage beta

Query: 2 DDVLDSQKA 10
DDV+DS K+
Sbjct: 35 DDVVDSSKS 43


>sp|DTX_COROM|DIPHTHERIA toxin|Corynephage omega

Query: 2 DDVLDSQKA 10
DDV+DS K+
Sbjct: 28 DDVVDSSKS 36


>sp|DTXH_CORBE|DIPHTHERIA toxin homolog CRM228|Corynephage beta

Query: 2 DDVLDSQKA 10
DDV+DS K+
Sbjct: 28 DDVVDSSKS 36




135|SequenceR|680|671|KLEESTDDVL

>sp|IE63_ALHV1|IMMEDIATE-EARLY phosphoprotein 57|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 LEESTDDVL 10
LEES DD +
Sbjct: 39 LEESVDDCM 47




136|SequenceR|685|676|DNSYQKLEES

>sp|YL294_MIMIV|UNCHARACTERIZED protein L294|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 NSYQKLEE 9
N+YQKL E
Sbjct: 197 NTYQKLHE 204


>sp|IKBL_ASFM2|IKB-LIKE protein|African swine fever virus (isolate

Query: 1 DNSYQKLEE 9
DN Y+KL E
Sbjct: 215 DNVYEKLPE 223


>sp|IKBL_ASFK5|IKB-LIKE protein|African swine fever virus (isolate

Query: 1 DNSYQKLEE 9
DN Y+KL E
Sbjct: 215 DNVYEKLPE 223




137|SequenceR|690|681|ALQGFDNSYQ

>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1 ALQGFDNSY 9
A+Q FDNSY
Sbjct: 4066 AIQSFDNSY 4074


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1 ALQGFDNSY 9
A+Q FDNSY
Sbjct: 4066 AIQSFDNSY 4074


>sp|GP_SBVBH|ENVELOPMENT polyprotein|Bovine Schmallenberg virus (isolate

Query: 5 FDNSYQ 10
FDNSYQ
Sbjct: 1169 FDNSYQ 1174


>sp|Y417_SIRV1|UNCHARACTERIZED protein 417|Sulfolobus islandicus rod-shaped virus 1

Query: 1 ALQGFDNSY 9
A+ FDNSY
Sbjct: 284 AINAFDNSY 292


>sp|POL1_RRVC|RNA1 polyprotein|Raspberry ringspot virus (strain cherry)

Query: 2 LQGFDNSY 9
++GF NSY
Sbjct: 1171 MEGFQNSY 1178


>sp|POL1_GFLV|RNA1 polyprotein|Grapevine fanleaf virus (GFLV)

Query: 1 ALQGFDNSYQ 10
A QG DN+ Q
Sbjct: 607 ATQGLDNAIQ 616


>sp|P10_PBCV1|MINOR capsid protein P10|Paramecium bursaria Chlorella virus 1

Query: 1 ALQGFDNSY 9
+++G++NSY
Sbjct: 189 SVEGYENSY 197


>sp|MCES_FOWPN|MRNA-CAPPING enzyme small subunit|Fowlpox virus (strain NVSL) (FPV)

Query: 2 LQGFDNSYQ 10
LQ DN YQ
Sbjct: 272 LQSLDNEYQ 280


>sp|G3P_BPPF1|ATTACHMENT protein G3P|Pseudomonas phage Pf1 (Bacteriophage Pf1)

Query: 2 LQGFDNSY 9
+ G DNSY
Sbjct: 75 MNGLDNSY 82


>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40

Query: 3 QGFDNSYQ 10
QG NSYQ
Sbjct: 393 QGISNSYQ 400




138|SequenceR|695|686|ELLEVALQGF

>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 2 LLEVALQG 9
LLE+AL+G
Sbjct: 344 LLEIALEG 351


>sp|POLG_PVYHU|GENOME polyprotein|Potato virus Y (strain Hungarian)

Query: 1 ELLEVALQGF 10
E+L +A QGF
Sbjct: 616 EMLYIARQGF 625


>sp|MVP_PVYHU|P3N-PIPO polyprotein|Potato virus Y (strain Hungarian)

Query: 1 ELLEVALQGF 10
E+L +A QGF
Sbjct: 616 EMLYIARQGF 625




139|SequenceR|700|691|QRFSQELLEV

>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 1 QRFSQELLEV 10
QR+ +EL EV
Sbjct: 1016 QRYEEELAEV 1025


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 1 QRFSQELLEV 10
QR+ +EL EV
Sbjct: 1015 QRYEEELAEV 1024


>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 2 RFSQELLEV 10
RF++ELLE+
Sbjct: 133 RFTEELLEL 141


>sp|VF124_ASFK5|UNCHARACTERIZED protein H124R|African swine fever virus (isolate

Query: 1 QRFSQELLEV 10
Q+F+Q LLE+
Sbjct: 10 QKFNQVLLEL 19




140|SequenceR|705|696|AMTEDQRFSQ

>sp|RDRP_MNSV|RNA-DIRECTED RNA polymerase|Melon necrotic spot virus (MNSV)

Query: 1 AMTEDQRFS 9
A++ED RFS
Sbjct: 737 AISEDARFS 745


>sp|R1A_BCHK9|REPLICASE polyprotein 1a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 3 TEDQRFSQ 10
TE++RF+Q
Sbjct: 520 TEEERFAQ 527


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 3 TEDQRFSQ 10
TE++RF+Q
Sbjct: 520 TEEERFAQ 527


>sp|GP46_BPSP1|INHIBITOR of histone-like protein HU|Bacillus phage SP01 (Bacteriophage

Query: 2 MTEDQRF 8
MTEDQ+F
Sbjct: 2 MTEDQKF 8




141|SequenceR|710|701|TLLKMAMTED

***** No hits found ******


142|SequenceR|715|706|NKLEYTLLKM

>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate

Query: 1 NKLEYTLLKM 10
NKL +T+LK+
Sbjct: 15 NKLNHTVLKL 24


>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 1 NKLEYTLLKM 10
NKL +T+LK+
Sbjct: 15 NKLNHTVLKL 24




143|SequenceR|720|711|TSNSWNKLEY

>sp|CPM_GLRV3|MINOR capsid protein|Grapevine leafroll-associated virus 3 (isolate

Query: 1 TSNSWNKLEY 10
TSN+WN+ Y
Sbjct: 131 TSNNWNEASY 140


>sp|RDRP_FHV|RNA-DIRECTED RNA polymerase|Flock house virus (FHV)

Query: 1 TSNSWNKLEY 10
T WN+LEY
Sbjct: 306 TKPGWNRLEY 315


>sp|RDRP_BBV|RNA-DIRECTED RNA polymerase|Black beetle virus (BBV)

Query: 1 TSNSWNKLEY 10
T WN+LEY
Sbjct: 306 TKPGWNRLEY 315


>sp|SPLR_NPVOP|SPHEROIDIN-LIKE protein|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 4 SWNKLEY 10
+WN+LEY
Sbjct: 182 TWNELEY 188


>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)

Query: 1 TSNSWNKLEY 10
+SNSW + EY
Sbjct: 300 SSNSWTRTEY 309


>sp|DPOL_EHV2|DNA polymerase catalytic subunit|Equine herpesvirus 2 (strain 86/87)

Query: 3 NSWNKLEY 10
+SW +LEY
Sbjct: 263 DSWTELEY 270


>sp|POLN_TYMVC|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus (isolate

Query: 1 TSNSWNKLE 9
TSN+W+ L+
Sbjct: 346 TSNAWDNLQ 354


>sp|POLN_TYMV|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus

Query: 1 TSNSWNKLE 9
TSN+W+ L+
Sbjct: 346 TSNAWDNLQ 354


>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)

Query: 1 TSNSWNKLEY 10
+SNSW + +Y
Sbjct: 308 SSNSWTQTQY 317


>sp|POLN_TYMVA|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus (isolate

Query: 1 TSNSWNKLE 9
TSN+W+ L+
Sbjct: 346 TSNAWDNLQ 354


>sp|RDRP_BOOLV|RNA-DIRECTED RNA polymerase|Boolarra virus (BoV)

Query: 1 TSNSWNKLEY 10
T WN+LE+
Sbjct: 306 TKPGWNRLEH 315


>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote

Query: 1 TSNSWNKLE 9
TSN +NKL+
Sbjct: 759 TSNDFNKLD 767


>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)

Query: 2 SNSWNKLEY 10
S+ W KL Y
Sbjct: 386 SHDWTKLRY 394


>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 2 SNSWNKLEY 10
S+ W KL Y
Sbjct: 385 SHDWTKLRY 393


>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)

Query: 2 SNSWNKLEY 10
S+ W KL Y
Sbjct: 386 SHDWTKLRY 394


>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)

Query: 2 SNSWNKLEY 10
S+ W KL Y
Sbjct: 385 SHDWTKLRY 393


>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 2 SNSWNKLEY 10
S+ W KL Y
Sbjct: 385 SHDWTKLRY 393


>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)

Query: 2 SNSWNKLEY 10
S+ W KL Y
Sbjct: 386 SHDWTKLRY 394


>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African

Query: 2 SNSWNKLEY 10
S+ W KL Y
Sbjct: 386 SHDWTKLRY 394


>sp|CAPSH_BPT6|MAJOR capsid protein|Enterobacteria phage T6 (Bacteriophage T6)

Query: 1 TSNSWNKLEY 10
T N WN++ +
Sbjct: 243 TDNPWNEMGF 252


>sp|CAPSH_BPT4|MAJOR capsid protein|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 TSNSWNKLEY 10
T N WN++ +
Sbjct: 243 TDNPWNEMGF 252


>sp|CAPSH_BPAR1|MAJOR capsid protein|Escherichia phage AR1 (Bacteriophage AR1)

Query: 1 TSNSWNKLEY 10
T N WN++ +
Sbjct: 243 TDNPWNEMGF 252


>sp|SPLR_NPVAC|SPHEROIDIN-LIKE protein|Autographa californica nuclear polyhedrosis virus

Query: 4 SWNKLEY 10
+WN+LEY
Sbjct: 183 TWNELEY 189


>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 TSNSWNKLEY 10
+SNSW + +Y
Sbjct: 308 SSNSWTQTQY 317




144|SequenceR|725|716|ALKLCTSNSW

>sp|RIR1_SUHVK|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Suid herpesvirus 1 (strain Kaplan)

Query: 1 ALKLCTSNSW 10
AL LC S++W
Sbjct: 233 ALVLCGSDAW 242


>sp|L_RSVT|RNA-DIRECTED RNA polymerase L|Rice stripe virus (isolate T)

Query: 4 LCTSNSW 10
LC NSW
Sbjct: 1657 LCVVNSW 1663


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 1 ALKLCTSNS 9
A KLCT N+
Sbjct: 1377 AAKLCTENN 1385


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 1 ALKLCTSNS 9
A KLCT N+
Sbjct: 1377 AAKLCTENN 1385


>sp|YR430_MIMIV|PUTATIVE transcription factor R430|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 KLCTSNSW 10
K+C+ N+W
Sbjct: 240 KICSHNNW 247


>sp|VE2_BPV3|REGULATORY protein E2|Bovine papillomavirus type 3

Query: 4 LCTSNSW 10
LC S SW
Sbjct: 360 LCMSTSW 366


>sp|VE2_BPV6|REGULATORY protein E2|Bos taurus papillomavirus 6 (Bovine

Query: 4 LCTSNSW 10
LC S SW
Sbjct: 381 LCMSTSW 387


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 2 LKLCTSNSW 10
+K C N+W
Sbjct: 1449 IKYCQDNNW 1457


>sp|NRAM_I85A8|NEURAMINIDASE A virus (strain A/Ruddy

Query: 4 LCTSNSW 10
LCT NSW
Sbjct: 92 LCTINSW 98


>sp|VE8E2_BPV3|PROTEIN E8^E2C|Bovine papillomavirus type 3

Query: 4 LCTSNSW 10
LC S SW
Sbjct: 166 LCMSTSW 172


>sp|P7_TNVA|UNCHARACTERIZED protein p7|Tobacco necrosis virus (strain A)

Query: 4 LCTSNSW 10
LCT N W
Sbjct: 47 LCTKNPW 53


>sp|NRAM_I84A1|NEURAMINIDASE A virus (strain A/Whale/Maine/1/1984

Query: 4 LCTSNSW 10
LCT NSW
Sbjct: 92 LCTINSW 98


>sp|NRAM_I75A5|NEURAMINIDASE A virus (strain A/Tern/Australia/G70C/1975

Query: 4 LCTSNSW 10
LCT NSW
Sbjct: 92 LCTINSW 98


>sp|CEP1_GAHVM|CYTOPLASMIC envelopment protein 1|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 4 LCTSNSW 10
LC +N+W
Sbjct: 192 LCITNTW 198


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 2 LKLCTSNSW 10
+K C N W
Sbjct: 1438 IKYCQDNKW 1446


>sp|PG190_VACCT|PROTEIN OPG190|Vaccinia virus (strain Tian Tan)

Query: 5 CTSNSW 10
CT+NSW
Sbjct: 171 CTANSW 176


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 2 LKLCTSNSW 10
+K C N W
Sbjct: 1442 IKYCQDNKW 1450


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 2 LKLCTSNSW 10
+K C N W
Sbjct: 1442 IKYCQDNKW 1450


>sp|PG190_VACCL|PROTEIN OPG190|Vaccinia virus (strain Lister) (VACV)

Query: 5 CTSNSW 10
CT+NSW
Sbjct: 171 CTANSW 176


>sp|PG190_VACC0|PROTEIN OPG190|Vaccinia virus (strain LC16m0) (VACV)

Query: 5 CTSNSW 10
CT+NSW
Sbjct: 171 CTANSW 176


>sp|PG190_MONPV|PROTEIN OPG190|Monkeypox virus (MPXV)

Query: 5 CTSNSW 10
CT+NSW
Sbjct: 171 CTANSW 176


>sp|PG190_VACCW|PROTEIN OPG190|Vaccinia virus (strain Western Reserve)

Query: 5 CTSNSW 10
CT+NSW
Sbjct: 171 CTANSW 176


>sp|PG190_VACCC|PROTEIN OPG190|Vaccinia virus (strain Copenhagen) (VACV)

Query: 5 CTSNSW 10
CT+NSW
Sbjct: 171 CTANSW 176


>sp|PG190_VACCA|PROTEIN OPG190|Vaccinia virus (strain Ankara) (VACV)

Query: 5 CTSNSW 10
CT+NSW
Sbjct: 171 CTANSW 176




145|SequenceR|730|721|LRSSVALKLC

***** No hits found ******


146|SequenceR|735|726|AVFPRLRSSV

>sp|POLG_PEMVC|GENOME polyprotein|Pepper mottle virus (isolate California)

Query: 1 AVFPRLRSS 9
A FP LRSS
Sbjct: 1673 AAFPTLRSS 1681




147|SequenceR|740|731|QTCTHAVFPR

>sp|ENV_SIVTN|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate TAN1)

Query: 3 CTHAVFP 9
CTH ++P
Sbjct: 244 CTHGIYP 250


>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 TCTHAVFP 9
TCTH + P
Sbjct: 242 TCTHGIRP 249


>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 TCTHAVFP 9
TCTH + P
Sbjct: 246 TCTHGIKP 253


>sp|RDRP_TBRFV|REPLICASE large subunit|Tomato brown rugose fruit virus

Query: 1 QTCTH 5
QTCTH
Sbjct: 184 QTCTH 188


>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain

Query: 3 CTHAVFPR 10
C H V PR
Sbjct: 832 CVHPVVPR 839


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 3 CTHAVFPR 10
C H V PR
Sbjct: 832 CVHPVVPR 839


>sp|VIF_HV2UC|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 2 TCTHAVFP 9
TC+ +FP
Sbjct: 53 TCSRVIFP 60


>sp|VIF_HV2EH|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 2 TCTHAVFP 9
TC+ +FP
Sbjct: 53 TCSRVIFP 60


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1 QTCTHAVFP 9
TC HAV P
Sbjct: 236 STCWHAVSP 244


>sp|VIF_SIVS4|VIRION infectivity factor|Simian immunodeficiency virus (isolate

Query: 2 TCTHAVFP 9
TC+ +FP
Sbjct: 53 TCSRVIFP 60


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1 QTCTHAVFP 9
TC HAV P
Sbjct: 236 STCWHAVSP 244


>sp|VIF_SIVSP|VIRION infectivity factor|Simian immunodeficiency virus (isolate

Query: 2 TCTHAVFP 9
TC+ +FP
Sbjct: 53 TCSRVIFP 60


>sp|VIF_SIVM2|VIRION infectivity factor|Simian immunodeficiency virus (isolate Mm251)

Query: 2 TCTHAVFP 9
TC+ +FP
Sbjct: 53 TCSRVIFP 60




148|SequenceR|745|736|DSLLMQTCTH

>sp|L_HIRRV|RNA-DIRECTED RNA polymerase L|Hirame rhabdovirus (strain Korea/CA 9703/1997)

Query: 1 DSLLMQTCTH 10
D L+MQ C+H
Sbjct: 1195 DELIMQLCSH 1204


>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 DSLLMQTCTH 10
DS+L++ C H
Sbjct: 543 DSILIEICGH 552


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 DSLLMQTCTH 10
DS+L+ C H
Sbjct: 770 DSVLLNGCKH 779


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 DSLLMQTCTH 10
DS+L+ C H
Sbjct: 770 DSVLLNGCKH 779


>sp|POLN_EEVV|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (VEEV)

Query: 1 DSLLMQTCTH 10
DS+L+ C H
Sbjct: 770 DSVLLNGCKH 779


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 DSLLMQTCTH 10
DS+L+ C H
Sbjct: 770 DSVLLNGCKH 779


>sp|MCP_POV01|MAJOR capsid protein|Pyramimonas orientalis virus (PoV01)

Query: 1 DSLLMQTCT 9
D +M+TCT
Sbjct: 322 DEAVMETCT 330


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 2 SLLMQTCT 9
SLL+Q CT
Sbjct: 925 SLLVQKCT 932


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 2 SLLMQTCT 9
SLL+Q CT
Sbjct: 926 SLLVQKCT 933




149|SequenceR|750|741|RGMWMDSLLM

>sp|PAX_I77AD|PROTEIN PA-X|Influenza A virus (strain A/Swine/Tennessee/26/1977

Query: 3 MWMDSLLM 10
MWMDS M
Sbjct: 232 MWMDSSRM 239


>sp|PAX_I67A2|PROTEIN PA-X|Influenza A virus (strain A/Swine/Wisconsin/1/1967

Query: 3 MWMDSLLM 10
MWMDS M
Sbjct: 232 MWMDSSRM 239


>sp|PAX_I61A1|PROTEIN PA-X|Influenza A virus (strain A/Swine/Wisconsin/1/1961

Query: 3 MWMDSLLM 10
MWMDS M
Sbjct: 232 MWMDSSRM 239


>sp|PAX_I97A0|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I96A2|PROTEIN PA-X|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I96A0|PROTEIN PA-X|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I93A0|PROTEIN PA-X|Influenza A virus (strain A/Kitakyushu/159/1993

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I86A3|PROTEIN PA-X|Influenza A virus (strain A/Equine/Tennessee/5/1986

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I85A7|PROTEIN PA-X|Influenza A virus (strain A/Ruddy

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I85A3|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Victoria/1/1985

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I83A8|PROTEIN PA-X|Influenza A virus (strain A/Hong

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I83A5|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Pennsylvania/1/1983

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I83A4|PROTEIN PA-X|Influenza A virus (strain A/Turkey/Ireland/1378/1983

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I83A1|PROTEIN PA-X|Influenza A virus (strain A/Chile/1/1983

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I82A4|PROTEIN PA-X|Influenza A virus (strain A/Swine/Hong

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I80AD|PROTEIN PA-X|Influenza A virus (strain A/Gull/Minnesota/945/1980

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I80AA|PROTEIN PA-X|Influenza A virus (strain A/India/6263/1980

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I80A8|PROTEIN PA-X|Influenza A virus (strain A/Turkey/Minnesota/833/1980

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I80A6|PROTEIN PA-X|Influenza A virus (strain A/Duck/Hokkaido/8/1980

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I80A4|PROTEIN PA-X|Influenza A virus (strain A/Memphis/4/1980

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I80A2|PROTEIN PA-X|Influenza A virus (strain A/Seal/Massachusetts/1/1980

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I79A7|PROTEIN PA-X|Influenza A virus (strain A/Grey

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I79A1|PROTEIN PA-X|Influenza A virus (strain A/Pintail/Alberta/119/1979

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I78AC|PROTEIN PA-X|Influenza A virus (strain A/Turkey/Minnesota/501/1978

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I78A9|PROTEIN PA-X|Influenza A virus (strain A/Swine/Hong

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I78A8|PROTEIN PA-X|Influenza A virus (strain A/Memphis/18/1978

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I78A7|PROTEIN PA-X|Influenza A virus (strain A/Memphis/2/1978

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I78A3|PROTEIN PA-X|Influenza A virus (strain A/Mallard/New

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I77AF|PROTEIN PA-X|Influenza A virus (strain A/Gull/Maryland/704/1977

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I77AB|PROTEIN PA-X|Influenza A virus (strain A/USSR/90/1977

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I77AA|PROTEIN PA-X|Influenza A virus (strain A/Brazil/11/1978

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I77A4|PROTEIN PA-X|Influenza A virus (strain A/Swine/Colorado/1/1977

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I76A6|PROTEIN PA-X|Influenza A virus (strain A/Memphis/110/1976

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I75A0|PROTEIN PA-X|Influenza A virus (strain A/Beijing/39/1975

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I73A5|PROTEIN PA-X|Influenza A virus (strain A/Port

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I73A4|PROTEIN PA-X|Influenza A virus (strain A/Equine/London/1416/1973

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I72A2|PROTEIN PA-X|Influenza A virus (strain A/Udorn/307/1972

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I71A1|PROTEIN PA-X|Influenza A virus (strain A/Memphis/1/1971

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I70A0|PROTEIN PA-X|Influenza A virus (strain A/Qu/7/1970

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I69A0|PROTEIN PA-X|Influenza A virus (strain A/England/878/1969

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I68A6|PROTEIN PA-X|Influenza A virus (strain A/Northern

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I68A5|PROTEIN PA-X|Influenza A virus (strain A/Korea/426/1968

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I68A4|PROTEIN PA-X|Influenza A virus (strain A/Hong

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I68A3|PROTEIN PA-X|Influenza A virus (strain A/Turkey/Ontario/6118/1968

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I67A0|PROTEIN PA-X|Influenza A virus (strain A/Tokyo/3/1967

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I66A1|PROTEIN PA-X|Influenza A virus (strain A/Turkey/Wisconsin/1/1966

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I60A0|PROTEIN PA-X|Influenza A virus (strain A/Ann

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I59A0|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Scotland/1959

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I57A5|PROTEIN PA-X|Influenza A virus (strain A/Singapore/1/1957

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I57A3|PROTEIN PA-X|Influenza A virus (strain A/Leningrad/134/47/1957

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I57A2|PROTEIN PA-X|Influenza A virus (strain A/Leningrad/134/17/1957

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I57A1|PROTEIN PA-X|Influenza A virus (strain A/Leningrad/134/1957

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I57A0|PROTEIN PA-X|Influenza A virus (strain A/Japan/305/1957

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I56A2|PROTEIN PA-X|Influenza A virus (strain A/Duck/England/1/1956

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I56A1|PROTEIN PA-X|Influenza A virus (strain A/Duck/Czechoslovakia/1956

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I54A2|PROTEIN PA-X|Influenza A virus (strain A/Malaysia:Malaya/302/1954

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I51A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Albany/12/1951

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I49A1|PROTEIN PA-X|Influenza A virus (strain A/Duck/Germany/1949

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I47A0|PROTEIN PA-X|Influenza A virus (strain A/Fort

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I45A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I43A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Iowa/1943

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I40A0|PROTEIN PA-X|Influenza A virus (strain A/Hickox/1940

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I36A0|PROTEIN PA-X|Influenza A virus (strain A/Henry/1936

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I35A3|PROTEIN PA-X|Influenza A virus (strain A/USA:Phila/1935

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I34A1|PROTEIN PA-X|Influenza A virus (strain A/Puerto

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I34A0|PROTEIN PA-X|Influenza A virus (strain A/Fowl

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I33A0|PROTEIN PA-X|Influenza A virus (strain A/Wilson-Smith/1933

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I30A0|PROTEIN PA-X|Influenza A virus (strain A/Swine/Iowa/15/1930

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I18A0|PROTEIN PA-X|Influenza A virus (strain A/Brevig

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I07A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Texas/UR06-0195/2007

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I06A0|PROTEIN PA-X|Influenza A virus (strain A/Russia:St.Petersburg/8/2006

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I05A1|PROTEIN PA-X|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I04A1|PROTEIN PA-X|Influenza A virus (strain A/Vietnam/1203/2004

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I03A2|PROTEIN PA-X|Influenza A virus (strain A/wyoming/03/2003

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I02A6|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I02A5|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I02A4|PROTEIN PA-X|Influenza A virus (strain A/Silky

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I02A2|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I02A1|PROTEIN PA-X|Influenza A virus (strain A/Guinea

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I02A0|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Brescia/1902

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I01A3|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I01A0|PROTEIN PA-X|Influenza A virus (strain A/Silky

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I00A0|PROTEIN PA-X|Influenza A virus (strain A/Duck/Hong

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|PAX_I000X|PROTEIN PA-X|Influenza A virus (strain A/X-31

Query: 3 MWMDS 7
MWMDS
Sbjct: 232 MWMDS 236


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 1 RGMWMDS 7
+G WMDS
Sbjct: 231 KGAWMDS 237


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 1 RGMWMDS 7
+G WMDS
Sbjct: 231 KGAWMDS 237


>sp|POLS_IBDVU|STRUCTURAL polyprotein|Avian infectious bursal disease virus

Query: 2 GMWMDSLLM 10
G+W DS+++
Sbjct: 632 GVWDDSIML 640


>sp|Y63_BPT3|UNCHARACTERIZED gene 6.3 protein|Enterobacteria phage T3 (Bacteriophage T3)

Query: 1 RGMWMDSLLM 10
RG+WM +L++
Sbjct: 18 RGLWMFALIV 27




150|SequenceR|755|746|KRMNLRGMWM

>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United

Query: 1 KRMNLRGMW 9
KRMN++ +W
Sbjct: 831 KRMNIQDLW 839


>sp|POLG_LMVE|GENOME polyprotein|Lettuce mosaic virus (strain E)

Query: 1 KRMNLRGMW 9
KR+ L+G W
Sbjct: 1975 KRLGLKGRW 1983


>sp|POLG_LMV0|GENOME polyprotein|Lettuce mosaic virus (strain 0

Query: 1 KRMNLRGMW 9
KR+ L+G W
Sbjct: 1975 KRLGLKGRW 1983


>sp|POLG_BTMV|GENOME polyprotein|Beet mosaic virus (BtMV)

Query: 1 KRMNLRGMW 9
KR+ L+G W
Sbjct: 1810 KRLKLKGRW 1818


>sp|POLG_PEMVM|GENOME polyprotein|Peanut mottle virus (strain M)

Query: 1 KRMNLRGMW 9
KR+ L+G W
Sbjct: 1821 KRLGLKGRW 1829


>sp|L_SBVBH|RNA-DIRECTED RNA polymerase L|Bovine Schmallenberg virus (isolate

Query: 1 KRMNLRGMW 9
+R+N+ G+W
Sbjct: 773 QRLNIPGIW 781


>sp|RDRP_PVMR|RNA replication polyprotein|Potato virus M (strain Russian)

Query: 1 KRMNLRGMW 9
+RM +RG W
Sbjct: 505 RRMFMRGAW 513


>sp|DEPOL_BPK51|DEPOLYMERASE, capsule KL64-specific|Klebsiella phage P510 (Bacteriophage P510)

Query: 4 NLRGMW 9
N+RG+W
Sbjct: 168 NIRGLW 173


>sp|CAPSD_TOBSV|CAPSID protein|Tobacco streak virus (strain WC)

Query: 1 KRMNLRGMWM 10
KR+ L G W+
Sbjct: 209 KRVQLAGYWI 218


>sp|POL_SIVCZ|GAG-POL polyprotein|Simian immunodeficiency virus (isolate CPZ

Query: 1 KRMNLRGMW 9
+R+ L+G+W
Sbjct: 471 ERIQLQGLW 479


>sp|VE1_BPV5|REPLICATION protein E1|Bovine papillomavirus type 5

Query: 1 KRMNLRGMWM 10
+R+N+ G W+
Sbjct: 406 ERVNVTGSWL 415




151|SequenceR|760|751|KYWSNKRMNL

>sp|POLS_IBDVB|STRUCTURAL polyprotein|Avian infectious bursal disease virus

Query: 1 KYWSNKR 7
KYW NKR
Sbjct: 889 KYWQNKR 895


>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 1 KYWSNKRMNL 10
K W+NK+ N+
Sbjct: 693 KLWANKKSNI 702


>sp|P59_LIYV9|PROTEIN p59|Lettuce infectious yellows virus (isolate

Query: 1 KYWSNKRMNL 10
+ W NKR NL
Sbjct: 431 RLWCNKRSNL 440


>sp|NRAM_I76AK|NEURAMINIDASE A virus (strain A/Duck/New

Query: 2 YWSNK 6
YWSNK
Sbjct: 413 YWSNK 417


>sp|CAPSH_ASFB7|HEXON protein p72|African swine fever virus (strain

Query: 1 KYWSNKRMNL 10
++W N+ +NL
Sbjct: 334 RFWFNENVNL 343


>sp|CAPSH_ASFWA|MAJOR capsid protein|African swine fever virus (isolate

Query: 1 KYWSNKRMNL 10
++W N+ +NL
Sbjct: 334 RFWFNENVNL 343


>sp|CAPSH_ASFK5|MAJOR capsid protein|African swine fever virus (isolate

Query: 1 KYWSNKRMNL 10
++W N+ +NL
Sbjct: 334 RFWFNENVNL 343


>sp|CAPSH_ASFM2|HEXON protein p72|African swine fever virus (isolate

Query: 1 KYWSNKRMNL 10
++W N+ +NL
Sbjct: 334 RFWFNENVNL 343




152|SequenceR|765|756|ISLIVKYWSN

>sp|MCP_EHV1V|MAJOR capsid protein|Equine herpesvirus 1 (strain V592)

Query: 1 ISLIVKYWSN 10
I IV YW N
Sbjct: 648 IQCIVSYWRN 657


>sp|MCP_EHV1B|MAJOR capsid protein|Equine herpesvirus 1 (strain Ab4p)

Query: 1 ISLIVKYWSN 10
I IV YW N
Sbjct: 648 IQCIVSYWRN 657


>sp|POLS_IBDVB|STRUCTURAL polyprotein|Avian infectious bursal disease virus

Query: 5 VKYWSN 10
VKYW N
Sbjct: 888 VKYWQN 893


>sp|SHUT_GAHVM|VIRION host shutoff protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 3 LIVKYWSN 10
+++KYW N
Sbjct: 424 ILLKYWGN 431


>sp|3608L_ASFM2|PROTEIN MGF 360-8L|African swine fever virus (isolate

Query: 1 ISLIVKYW 8
I+++VKYW
Sbjct: 171 INVLVKYW 178




153|SequenceR|770|761|APPVLISLIV

***** No hits found ******


154|SequenceR|775|766|ELLLIAPPVL

>sp|MCEL_FOWPN|MRNA-CAPPING enzyme catalytic subunit|Fowlpox virus (strain NVSL) (FPV)

Query: 1 ELLLIAPPVL 10
EL+L PP++
Sbjct: 40 ELILFKPPII 49


>sp|Y023_NPVOP|UNCHARACTERIZED 73.1 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 ELLLIAPP 8
ELL +APP
Sbjct: 165 ELLAVAPP 172


>sp|GG_EHV1V|ENVELOPE glycoprotein G|Equine herpesvirus 1 (strain V592)

Query: 1 ELLLIAPPV 9
EL+L+ PP+
Sbjct: 64 ELILLDPPI 72


>sp|GG_EHV1B|ENVELOPE glycoprotein G|Equine herpesvirus 1 (strain Ab4p)

Query: 1 ELLLIAPPV 9
EL+L+ PP+
Sbjct: 64 ELILLDPPI 72


>sp|GG_EHV1K|ENVELOPE glycoprotein G|Equine herpesvirus 1 (strain Kentucky

Query: 1 ELLLIAPPV 9
EL+L+ PP+
Sbjct: 64 ELILLDPPI 72


>sp|MCP_ELHVK|MAJOR capsid protein|Elephantid herpesvirus 1 (isolate Asian

Query: 2 LLLIAPPVL 10
LL+APP++
Sbjct: 904 FLLVAPPLI 912


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 3 LLIAPPVL 10
+L+APP L
Sbjct: 265 MLVAPPTL 272




155|SequenceR|780|771|AKTKYELLLI

>sp|NCAP_INBAC|NUCLEOPROTEIN B virus (strain B/Ann

Query: 1 AKTKYELLLI 10
AKT YE +L+
Sbjct: 273 AKTAYEKILL 282


>sp|NCAP_INBAD|NUCLEOPROTEIN B virus (strain B/Ann

Query: 1 AKTKYELLLI 10
AKT YE +L+
Sbjct: 273 AKTAYEKILL 282


>sp|NCAP_INBP9|NUCLEOPROTEIN B virus (strain B/Panama/45/1990)

Query: 1 AKTKYELLLI 10
AKT YE +L+
Sbjct: 273 AKTAYEKILL 282


>sp|NCAP_INBLE|NUCLEOPROTEIN B virus (strain B/Lee/1940)

Query: 1 AKTKYELLLI 10
AKT YE +L+
Sbjct: 273 AKTAYEKILL 282




156|SequenceR|785|776|IHSMEAKTKY

***** No hits found ******


157|SequenceR|790|781|DQSQPIHSME

>sp|VU84_HHV7J|PROTEIN U84|Human herpesvirus 7 (strain JI)

Query: 1 DQSQPIHSME 10
+ S+PIHS E
Sbjct: 111 NDSKPIHSPE 120


>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 1 DQSQPIHSME 10
D +QP HS E
Sbjct: 640 DNTQPEHSFE 649


>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)

Query: 1 DQSQPIHSME 10
D +QP HS E
Sbjct: 640 DNTQPEHSFE 649


>sp|POLG_PPVEA|GENOME polyprotein|Plum pox potyvirus (strain El

Query: 3 SQPIHSME 10
S+PIH +E
Sbjct: 1093 SEPIHRLE 1100




158|SequenceR|795|786|TMQHADQSQP

>sp|RIR1_EHV4|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Equine herpesvirus 4 (strain 1942)

Query: 2 MQHADQSQ 9
+QHAD++Q
Sbjct: 441 IQHADETQ 448


>sp|RIR1_EHV1B|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Equine herpesvirus 1 (strain Ab4p)

Query: 2 MQHADQSQ 9
+QHAD++Q
Sbjct: 442 IQHADETQ 449


>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)

Query: 1 TMQHADQSQP 10
T+Q+ DQ+ P
Sbjct: 588 TLQYVDQAVP 597


>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)

Query: 1 TMQHADQSQP 10
T+Q+ DQ+ P
Sbjct: 588 TLQYVDQAVP 597


>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)

Query: 1 TMQHADQSQP 10
T+Q+ DQ+ P
Sbjct: 588 TLQYVDQAVP 597




159|SequenceR|800|791|ESDDMTMQHA

>sp|MVP_PEMVM|P3N-PIPO polyprotein|Peanut mottle virus (strain M)

Query: 3 DDMTMQHA 10
DDM QHA
Sbjct: 408 DDMRQQHA 415


>sp|POLG_PEMVM|GENOME polyprotein|Peanut mottle virus (strain M)

Query: 3 DDMTMQHA 10
DDM QHA
Sbjct: 408 DDMRQQHA 415


>sp|EA10_LAMBD|PROTEIN ea10|Escherichia phage lambda (Bacteriophage lambda)

Query: 1 ESDDMTMQHA 10
+SDDMT++ A
Sbjct: 113 DSDDMTIKAA 122




160|SequenceR|805|796|NQFNNESDDM

>sp|NCAP_CVPPU|NUCLEOPROTEIN transmissible gastroenteritis coronavirus (strain

Query: 2 QFNNESDD 9
QFNN+ DD
Sbjct: 181 QFNNKKDD 188


>sp|YR348_MIMIV|UNCHARACTERIZED protein R348|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 QFNNESDDM 10
QF ESDD+
Sbjct: 569 QFRKESDDV 577




161|SequenceR|810|801|IEETINQFNN

>sp|RDRP_BOTVX|RNA replication protein|Botrytis virus X (isolate Botrytis

Query: 2 EETINQFNN 10
E+T NQFN+
Sbjct: 1126 EKTSNQFND 1134


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1 IEETINQFN 9
++ET+ QFN
Sbjct: 2465 VKETVVQFN 2473


>sp|VE2_HPV66|REGULATORY protein E2|Human papillomavirus 66

Query: 3 ETINQFNN 10
ET+N++NN
Sbjct: 211 ETVNEYNN 218


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1 IEETINQFN 9
++ET+ QFN
Sbjct: 2465 VKETVVQFN 2473




162|SequenceR|815|806|FVEMPIEETI

>sp|NCAP_INBSI|NUCLEOPROTEIN B virus (strain B/Singapore/222/1979)

Query: 2 VEMPIEETI 10
VE+PI++TI
Sbjct: 534 VEIPIKQTI 542


>sp|NCAP_INBP9|NUCLEOPROTEIN B virus (strain B/Panama/45/1990)

Query: 2 VEMPIEETI 10
VE+PI++TI
Sbjct: 534 VEIPIKQTI 542


>sp|NCAP_INBAC|NUCLEOPROTEIN B virus (strain B/Ann

Query: 2 VEMPIEETI 10
+E+PI++TI
Sbjct: 534 IEIPIKQTI 542


>sp|NCAP_INBLE|NUCLEOPROTEIN B virus (strain B/Lee/1940)

Query: 2 VEMPIEETI 10
+E+PI++TI
Sbjct: 534 IEIPIKQTI 542




163|SequenceR|820|811|IRVEKFVEMP

***** No hits found ******


164|SequenceR|825|816|ENSDLIRVEK

>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 2 NSDLIRVE 9
N+DLIR+E
Sbjct: 1170 NNDLIRIE 1177


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 1 ENSDLIRVEK 10
ENSD+I V K
Sbjct: 4569 ENSDIINVYK 4578


>sp|PHOSP_PI1HD|PHOSPHOPROTEIN parainfluenza 1 virus (strain

Query: 1 ENSDLIRVEK 10
ENS L RVEK
Sbjct: 527 ENSPLSRVEK 536


>sp|PHOSP_PI1HB|PHOSPHOPROTEIN parainfluenza 1 virus (strain

Query: 1 ENSDLIRVEK 10
ENS L RVEK
Sbjct: 527 ENSPLSRVEK 536


>sp|PHOSP_PI1HE|PHOSPHOPROTEIN parainfluenza 1 virus (strain

Query: 1 ENSDLIRVEK 10
ENS L RVEK
Sbjct: 527 ENSPLSRVEK 536


>sp|PHOSP_PI1HC|PHOSPHOPROTEIN parainfluenza 1 virus (strain

Query: 1 ENSDLIRVEK 10
ENS L RVEK
Sbjct: 527 ENSPLSRVEK 536


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 ENSDLIRV 8
EN D+IRV
Sbjct: 4400 ENPDIIRV 4407


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 1 ENSDLIRVEK 10
E+ +L+RVEK
Sbjct: 653 ESYELVRVEK 662


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 1 ENSDLIRVEK 10
E+ +L+RVEK
Sbjct: 653 ESYELVRVEK 662


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 1 ENSDLIRVEK 10
E+ +L+RVEK
Sbjct: 653 ESYELVRVEK 662




165|SequenceR|830|821|MENKGENSDL

>sp|NEF_HV1H3|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 3 NKGENSDL 10
NKGEN+ L
Sbjct: 157 NKGENTSL 164


>sp|NEF_HV1H2|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 3 NKGENSDL 10
NKGEN+ L
Sbjct: 157 NKGENTSL 164


>sp|NEF_HV1B1|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 3 NKGENSDL 10
NKGEN+ L
Sbjct: 157 NKGENTSL 164


>sp|NEF_HV112|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 3 NKGENSDL 10
NKGEN+ L
Sbjct: 157 NKGENTSL 164


>sp|NEF_HV1BR|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 3 NKGENSDL 10
NKGEN+ L
Sbjct: 157 NKGENTSL 164


>sp|CAPSD_CARMV|CAPSID protein|Carnation mottle virus (CarMV)

Query: 1 MENKGE 6
MENKGE
Sbjct: 1 MENKGE 6


>sp|CAPSD_CARMS|CAPSID protein|Carnation mottle virus (isolate China/Shanghai)

Query: 1 MENKGE 6
MENKGE
Sbjct: 1 MENKGE 6


>sp|NEF_HV1LW|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 3 NKGENSDL 10
NKGEN+ L
Sbjct: 157 NKGENTSL 164


>sp|POLG_FCVUR|GENOME polyprotein|Feline calicivirus (strain Cat/United States/Urbana/1960)

Query: 4 KGENSD 9
KGENSD
Sbjct: 1666 KGENSD 1671


>sp|POLG_FCVF9|GENOME polyprotein|Feline calicivirus (strain F9) (FCV)

Query: 4 KGENSD 9
KGENSD
Sbjct: 1666 KGENSD 1671


>sp|POLG_FCVF4|GENOME polyprotein|Feline calicivirus (strain Japanese F4)

Query: 4 KGENSD 9
KGENSD
Sbjct: 1666 KGENSD 1671


>sp|POLG_FCV|GENOME polyprotein|Feline calicivirus (FCV)

Query: 4 KGENSD 9
KGENSD
Sbjct: 1666 KGENSD 1671


>sp|NEF_HV1B8|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 3 NKGENSDL 10
NKGEN+ L
Sbjct: 156 NKGENTSL 163


>sp|NEF_HV1LA|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 3 NKGENSDL 10
NKGEN+ L
Sbjct: 157 NKGENTRL 164


>sp|ENV_SIVCZ|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate CPZ

Query: 1 MENKGENSDL 10
+ENK +N+D+
Sbjct: 272 VENKSKNTDV 281


>sp|CEP1_HHV8P|CYTOPLASMIC envelopment protein 1|Human herpesvirus 8 type P

Query: 1 MENKGENSD 9
+E+ GEN D
Sbjct: 223 LESSGENED 231


>sp|NEF_HV1SE|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 3 NKGENSDL 10
NKGEN+ L
Sbjct: 158 NKGENNSL 165




166|SequenceR|835|826|KMQIEMENKG

>sp|RDRP_SCPMV|REPLICASE polyprotein P2AB|Southern cowpea mosaic virus (SCPMV)

Query: 2 MQIEMENKG 10
+++E+EN+G
Sbjct: 349 LEVEIENRG 357


>sp|P2A_SCPMV|POLYPROTEIN P2A|Southern cowpea mosaic virus (SCPMV)

Query: 2 MQIEMENKG 10
+++E+EN+G
Sbjct: 349 LEVEIENRG 357




167|SequenceR|840|831|PLKKSKMQIE

>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann

Query: 2 LKKSKMQIE 10
LKKSKM++E
Sbjct: 376 LKKSKMRME 384


>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)

Query: 2 LKKSKMQIE 10
LKKSKM++E
Sbjct: 376 LKKSKMRME 384


>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann

Query: 2 LKKSKMQIE 10
LKKSKM++E
Sbjct: 376 LKKSKMRME 384




168|SequenceR|845|836|FKRTIPLKKS

>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)

Query: 3 RTIPLKK 9
RTIPLK+
Sbjct: 1143 RTIPLKE 1149




169|SequenceR|850|841|HYFAYFKRTI

>sp|REP_ICMV|REPLICATION-ASSOCIATED protein|Indian cassava mosaic virus (ICMV)

Query: 1 HYFAYFKR 8
HY +FKR
Sbjct: 265 HYLKHFKR 272


>sp|V143_NPVOP|ATP-DEPENDENT DNA helicase P143|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 HYFAYFKRT 9
HYF Y K T
Sbjct: 457 HYFIYLKLT 465




170|SequenceR|855|846|KVIPAHYFAY

>sp|MVP_LIYV9|MOVEMENT protein Hsp70h|Lettuce infectious yellows virus (isolate

Query: 1 KVIPAHYFA 9
KVIPA Y A
Sbjct: 247 KVIPATYLA 255


>sp|POL1_BBWVS|RNA1 polyprotein|Broad bean wilt virus 1

Query: 1 KVIPAHYFAY 10
K PA +F Y
Sbjct: 1040 KTFPAQFFTY 1049


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 2 VIPAHYFAY 10
VIP H AY
Sbjct: 193 VIPEHQLAY 201


>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)

Query: 1 KVIPAHYFA 9
KV+P YFA
Sbjct: 639 KVLPFTYFA 647


>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 1 KVIPAHYFA 9
KV+P YFA
Sbjct: 639 KVLPFTYFA 647


>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)

Query: 1 KVIPAHYFA 9
KV+P YFA
Sbjct: 639 KVLPFTYFA 647


>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann

Query: 1 KVIPAHYFA 9
KV+P YFA
Sbjct: 639 KVLPFTYFA 647


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 2 VIPAHYFAY 10
+I +H+F Y
Sbjct: 824 IISSHFFVY 832


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 2 VIPAHYFAY 10
+I +H+F Y
Sbjct: 824 IISSHFFVY 832


>sp|DNBI_GAHVM|MAJOR DNA-binding protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 KVIPAHY 7
K++P HY
Sbjct: 81 KLVPTHY 87


>sp|L_CDVO|RNA-DIRECTED RNA polymerase L|Canine distemper virus (strain Onderstepoort)

Query: 2 VIPAHYFAY 10
+I +H+F Y
Sbjct: 824 IISSHFFVY 832


>sp|Y030_NPVOP|UNCHARACTERIZED 52.7 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 4 PAHYF 8
PAHYF
Sbjct: 253 PAHYF 257


>sp|YR365_MIMIV|UNCHARACTERIZED protein R365|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 KVIPAHYFA 9
K IP YFA
Sbjct: 11 KKIPVEYFA 19




171|SequenceR|860|851|TNFWFKVIPA

>sp|TUBE1_BPK34|TAIL tubular protein A|Klebsiella phage KP34 (Bacteriophage KP34)

Query: 1 TNFWFKVI 8
T FWF V+
Sbjct: 46 TGFWFNVV 53


>sp|RPB1_IIV3|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 3

Query: 1 TNFWFKV 7
TN WF++
Sbjct: 263 TNLWFRI 269


>sp|MVP_TMOB|MOVEMENT protein|Tobamovirus Ob

Query: 2 NFWFKVIP 9
NF FK+IP
Sbjct: 113 NFSFKLIP 120


>sp|MVP_TMGMV|MOVEMENT protein|Tobacco mild green mosaic virus

Query: 2 NFWFKVIP 9
NF FK+IP
Sbjct: 116 NFSFKLIP 123


>sp|ETF1_MYXVL|EARLY transcription factor 70 kDa|Myxoma virus (strain Lausanne) (MYXV)

Query: 2 NFWFKVIP 9
N WF IP
Sbjct: 434 NIWFMTIP 441


>sp|POLN_AHEV|NON-STRUCTURAL polyprotein pORF1|Avian hepatitis E virus (isolate

Query: 3 FWFKV 7
FWFKV
Sbjct: 404 FWFKV 408


>sp|ETF1_RFVKA|EARLY transcription factor 70 kDa|Rabbit fibroma virus (strain Kasza)

Query: 2 NFWFKVIP 9
N WF IP
Sbjct: 434 NIWFMTIP 441


>sp|ETF1_FOWPN|EARLY transcription factor 70 kDa|Fowlpox virus (strain NVSL) (FPV)

Query: 2 NFWFKVIP 9
N WF IP
Sbjct: 434 NIWFMTIP 441


>sp|ETF1_YMTV5|EARLY transcription factor 70 kDa|Yaba monkey tumor virus (strain

Query: 2 NFWFKVIP 9
N WF IP
Sbjct: 434 NIWFMTIP 441


>sp|RDRP_SCVLA|PROBABLE RNA-directed RNA polymerase|Saccharomyces cerevisiae virus L-A

Query: 1 TNFWFKVIPA 10
T+F F ++PA
Sbjct: 722 THFLFDIVPA 731


>sp|UL79_HHV6U|PROTEIN U52|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 NFWFKV 7
N+WF++
Sbjct: 81 NYWFRI 86


>sp|RING1_BPCA1|RING protein 1|Bacteroides phage crAss001 (Bacteroides phage

Query: 1 TNFWFKVIP 9
TN W ++IP
Sbjct: 207 TNMWNQLIP 215


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 TNFWF 5
TN+WF
Sbjct: 3478 TNYWF 3482


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 TNFWF 5
TN+WF
Sbjct: 3478 TNYWF 3482


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 3 FWFKVI 8
+WFKV+
Sbjct: 2021 YWFKVL 2026


>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain

Query: 3 FWFKVI 8
+WFKV+
Sbjct: 2021 YWFKVL 2026


>sp|GD_EHV1A|ENVELOPE glycoprotein D|Equine herpesvirus 1 (strain AB1)

Query: 4 WFKVIP 9
WFK++P
Sbjct: 119 WFKIMP 124




172|SequenceR|865|856|GLYALTNFWF

>sp|Y06P_BPT4|UNCHARACTERIZED 23.8 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 GLYALTNFWF 10
G+Y+L++ WF
Sbjct: 105 GVYSLSDAWF 114


>sp|YL127_MIMIV|PUTATIVE F-box protein L127|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 LYALTNFWF 10
LYA+TNF F
Sbjct: 238 LYAMTNFNF 246


>sp|VTP3_TTV1V|VIRAL protein TPX|Thermoproteus tenax virus 1 (strain

Query: 2 LYALTNFWF 10
LYA TN WF
Sbjct: 156 LYADTNDWF 164


>sp|RPB1_IIV3|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 3

Query: 5 LTNFWF 10
LTN WF
Sbjct: 262 LTNLWF 267


>sp|VTPX_TTV1K|VIRAL protein TPX|Thermoproteus tenax virus 1 (strain

Query: 2 LYALTNFWF 10
LYA TN WF
Sbjct: 156 LYADTNDWF 164


>sp|RPOA_LDVC|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 1 GLYALTNF 8
GLY L NF
Sbjct: 1294 GLYVLLNF 1301


>sp|209R_IIV6|UNCHARACTERIZED protein 209R|Invertebrate iridescent virus 6 (IIV-6)

Query: 3 YALTNFW 9
Y LTN W
Sbjct: 370 YTLTNIW 376


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 2 LYALTNFWF 10
+ TN+WF
Sbjct: 3474 MSGFTNYWF 3482


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 2 LYALTNFWF 10
+ TN+WF
Sbjct: 3474 MSGFTNYWF 3482


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 GLYALTN 7
GLY LTN
Sbjct: 199 GLYVLTN 205


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 GLYALTN 7
GLY LTN
Sbjct: 199 GLYVLTN 205


>sp|POLFS_SINV3|POLYPROTEIN-FSD invicta virus 3 (SINV-3)

Query: 1 GLYALTNFWF 10
G Y LT W
Sbjct: 2733 GTYELTTMWL 2742


>sp|NCAP_QRFVE|NUCLEOPROTEIN virus (isolate QrfV/Tick/Afghanistan/EG_T_377/1968) (QRFV)

Query: 1 GLYALTNFW 9
G+YA+ W
Sbjct: 74 GVYAMNQIW 82


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 1 GLYALTN 7
GLY LTN
Sbjct: 199 GLYLLTN 205




173|SequenceR|870|861|YLMLFGLYAL

>sp|YL701_MIMIV|UNCHARACTERIZED protein L701|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 YLMLFGL 7
YL+LFG+
Sbjct: 181 YLLLFGI 187


>sp|YL533_MIMIV|UNCHARACTERIZED protein L533|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 YLMLFGLYAL 10
Y++LFGL ++
Sbjct: 145 YILLFGLESI 154




174|SequenceR|875|866|LVVFTYLMLF

>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19

Query: 1 LVVFTYLMLF 10
+V+FTY+ F
Sbjct: 4 VVIFTYIPAF 13




175|SequenceR|880|871|QEMQVLVVFT

***** No hits found ******


176|SequenceR|885|876|QVSPLQEMQV

***** No hits found ******


177|SequenceR|890|881|IVIWEQVSPL

>sp|TRX1_EHV1B|TRIPLEX capsid protein 1|Equine herpesvirus 1 (strain Ab4p)

Query: 2 VIWEQVSP 9
V WEQ+SP
Sbjct: 27 VRWEQISP 34


>sp|TRX1_EHV1V|TRIPLEX capsid protein 1|Equine herpesvirus 1 (strain V592)

Query: 2 VIWEQVSP 9
V WEQ+SP
Sbjct: 27 VRWEQISP 34


>sp|REN_ABMVW|REPLICATION enhancer protein|Abutilon mosaic virus (isolate West

Query: 1 IVIWEQVSPL 10
+ IWE +PL
Sbjct: 18 VYIWEIANPL 27


>sp|REN_TGMVY|REPLICATION enhancer protein|Tomato golden mosaic virus (strain

Query: 1 IVIWEQVSPL 10
+ IWE +PL
Sbjct: 18 VYIWEITNPL 27


>sp|ICP27_SHV21|MRNA export factor ICP27 homolog|Saimiriine herpesvirus 2 (strain 11)

Query: 2 VIWEQVSPL 10
+ WE SPL
Sbjct: 69 ITWEHQSPL 77


>sp|IBMP_CYLCV|TRANSACTIVATOR/VIROPLASMIN protein|Cestrum yellow leaf curling virus

Query: 4 WEQVSPL 10
W Q++PL
Sbjct: 199 WSQIAPL 205




178|SequenceR|895|886|TFIYAIVIWE

>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1 TFIYAIVIWE 10
TF YA +WE
Sbjct: 4065 TFTYASALWE 4074


>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 1 TFIYAIVIWE 10
TF YA +WE
Sbjct: 4063 TFTYASALWE 4072


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 1 TFIYAIVIWE 10
TF YA +WE
Sbjct: 4063 TFTYASALWE 4072


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 TFIYAIVIWE 10
TF YA +WE
Sbjct: 4065 TFTYASALWE 4074


>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 1 TFIYAIVIWE 10
TF YA +WE
Sbjct: 4059 TFTYASALWE 4068


>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 1 TFIYAIVIWE 10
TF YA +WE
Sbjct: 4071 TFTYASALWE 4080


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 1 TFIYAIVIWE 10
TF YA +WE
Sbjct: 4059 TFTYASALWE 4068


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 1 TFIYAIVIWE 10
TF YA +WE
Sbjct: 4071 TFTYASALWE 4080


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1 TFIYAIVIWE 10
TF YA +WE
Sbjct: 4088 TFTYASALWE 4097


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 TFIYAIVIWE 10
TF YA +WE
Sbjct: 4088 TFTYASALWE 4097


>sp|VPU_HV190|PROTEIN Vpu|Human immunodeficiency virus type 1

Query: 1 TFIYAIVIW 9
TFI A+++W
Sbjct: 14 TFIIAVIVW 22


>sp|MCE_MIMIV|PROBABLE mRNA-capping enzyme|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 FIYAIVIWE 10
F+YA +IW+
Sbjct: 447 FMYADMIWK 455


>sp|YO12_ADEG1|UNCHARACTERIZED protein ORF12|Fowl adenovirus A serotype 1

Query: 3 IYAIVIW 9
IYAI +W
Sbjct: 13 IYAIYLW 19




179|SequenceR|900|891|KEIAYTFIYA

***** No hits found ******


180|SequenceR|905|896|FIERVKEIAY

>sp|VR2A_BPT4|PROTEIN rIIA|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 IERVKEIA 9
IERVKE++
Sbjct: 292 IERVKELS 299




181|SequenceR|910|901|GAESMFIERV

***** No hits found ******


182|SequenceR|915|906|KQNVKGAESM

***** No hits found ******


183|SequenceR|920|911|FWVKIKQNVK

>sp|CAP9_ADE12|HEXON-INTERLACING protein IX|Human adenovirus A serotype 12

Query: 1 FWVKIKQNV 9
+W ++QNV
Sbjct: 27 YWAGVRQNV 35


>sp|PG089_VARV|PUTATIVE nuclease OPG089|Variola virus

Query: 3 VKIKQNVK 10
+KIKQNV+
Sbjct: 78 IKIKQNVR 85


>sp|PG089_VAR67|PUTATIVE nuclease OPG089|Variola virus (isolate Human/India/Ind3/1967)

Query: 3 VKIKQNVK 10
+KIKQNV+
Sbjct: 78 IKIKQNVR 85


>sp|OE66_NPVAC|NON-SULFATED chondroitin lyase E66|Autographa californica nuclear polyhedrosis

Query: 2 WVKIKQNVK 10
WV +K+N K
Sbjct: 637 WVMVKENNK 645




184|SequenceR|925|916|NFYDSFWVKI

>sp|TRAP_ABMVW|TRANSCRIPTIONAL activator protein|Abutilon mosaic virus (isolate West

Query: 1 NFYDSFWVKI 10
+F DSFWV +
Sbjct: 118 DFDDSFWVNL 127


>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 FYDSFWVK 9
FY S WVK
Sbjct: 661 FYQSTWVK 668


>sp|TRAP_PYMVV|TRANSCRIPTIONAL activator protein|Potato yellow mosaic virus (isolate

Query: 4 DSFWVKI 10
DSFWV++
Sbjct: 121 DSFWVEL 127


>sp|GD_HHV1P|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Patton)

Query: 1 NFYDSF 6
N+YDSF
Sbjct: 161 NYYDSF 166


>sp|GD_HHV1K|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain KOS)

Query: 1 NFYDSF 6
N+YDSF
Sbjct: 161 NYYDSF 166


>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)

Query: 1 NFYDSF 6
N+YDSF
Sbjct: 160 NYYDSF 165


>sp|GD_HHV1F|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain F)

Query: 1 NFYDSF 6
N+YDSF
Sbjct: 161 NYYDSF 166


>sp|GD_HHV1A|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Angelotti)

Query: 1 NFYDSF 6
N+YDSF
Sbjct: 161 NYYDSF 166


>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)

Query: 1 NFYDSF 6
N+YDSF
Sbjct: 161 NYYDSF 166


>sp|POLG_PEV9U|GENOME polyprotein|Porcine enterovirus 9 (strain UKG/410/73)

Query: 4 DSFWVKI 10
D+FW KI
Sbjct: 1922 DTFWSKI 1928


>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P

Query: 2 FYDSFWVKI 10
YDS W+ I
Sbjct: 1153 LYDSHWLNI 1161


>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate

Query: 2 FYDSFWV 8
F+DS WV
Sbjct: 298 FFDSIWV 304


>sp|TRAP_TMOV|TRANSCRIPTIONAL activator protein|Tomato mottle virus (isolate Florida)

Query: 4 DSFWVKI 10
DSFW+ +
Sbjct: 121 DSFWINL 127


>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain

Query: 2 FYDSFWV 8
F+DS WV
Sbjct: 298 FFDSVWV 304


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 1 NFYDSF 6
NFYD F
Sbjct: 761 NFYDGF 766


>sp|VG430_BPPF1|UNCHARACTERIZED protein ORF430|Pseudomonas phage Pf1 (Bacteriophage Pf1)

Query: 3 YDSFW 7
YD+FW
Sbjct: 322 YDAFW 326


>sp|VG33_ICHVA|UNCHARACTERIZED protein ORF33|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 YDSFWVK 9
YD FW K
Sbjct: 269 YDEFWYK 275


>sp|MOBC_BPT4|PROBABLE mobile endonuclease C|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 YDSFWV 8
YD++W+
Sbjct: 70 YDAYWI 75


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 4 DSFWV 8
DSFWV
Sbjct: 1644 DSFWV 1648


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 4 DSFWV 8
DSFWV
Sbjct: 1644 DSFWV 1648


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 4 DSFWV 8
DSFWV
Sbjct: 1644 DSFWV 1648




185|SequenceR|930|921|ITDSINFYDS

>sp|LTP_GAHVM|LARGE tegument protein deneddylase|Gallid herpesvirus 2 (strain

Query: 1 ITDSINFYD 9
ITDS N YD
Sbjct: 2362 ITDSPNLYD 2370


>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)

Query: 2 TDSINFYDS 10
TD++ F+DS
Sbjct: 107 TDAVLFFDS 115


>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)

Query: 2 TDSINFYDS 10
TD++ F+DS
Sbjct: 107 TDAVLFFDS 115


>sp|POLG_RGMVD|GENOME polyprotein|Ryegrass mosaic virus (isolate Denmark/Danish)

Query: 1 ITDSINFYDS 10
ITD+I +DS
Sbjct: 2352 ITDAIPIFDS 2361


>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 ITDSINFYD 9
ITD IN Y+
Sbjct: 147 ITDWINMYE 155


>sp|Y023_NPVOP|UNCHARACTERIZED 73.1 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 ITDSINFY 8
+TD+ NFY
Sbjct: 347 VTDTRNFY 354




186|SequenceR|935|926|FSIIAITDSI

>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)

Query: 1 FSIIAITDS 9
+S+IA+TDS
Sbjct: 262 YSVIAVTDS 270




187|SequenceR|940|931|GFGIFFSIIA

>sp|GLYCO_ARV|GLYCOPROTEIN River virus (ARV)

Query: 1 GFGIFFSI 8
G G+FFSI
Sbjct: 562 GVGLFFSI 569


>sp|YL268_MIMIV|PUTATIVE serine/threonine-protein kinase L268|Acanthamoeba polyphaga

Query: 3 GIFFSIIA 10
GIFF+I++
Sbjct: 135 GIFFTIVS 142




188|SequenceR|945|936|AGFRLGFGIF

>sp|TGB2_LOLV|MOVEMENT protein TGB2|Lolium latent virus (isolate Lolium/USA/US1/-)

Query: 1 AGFRLGFGIF 10
AGF +G GIF
Sbjct: 26 AGFAVGLGIF 35


>sp|YL829_MIMIV|UNCHARACTERIZED protein L829|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 RLGFGIF 10
RLGFG F
Sbjct: 315 RLGFGTF 321


>sp|RDRP_QRFVE|RNA-DIRECTED RNA polymerase catalytic subunit|Quaranfil virus (isolate

Query: 1 AGFRLGFGI 9
A FRLG G+
Sbjct: 573 AQFRLGIGV 581


>sp|TMP_BPPCD|PROBABLE tape measure protein|Clostridium phage phiCD119 (strain Clostridium

Query: 2 GFRLGFGI 9
GF+ GFG+
Sbjct: 812 GFKNGFGV 819




189|SequenceR|950|941|AFNWKAGFRL

>sp|POLB_CHPVU|ORFB polyprotein|Cryphonectria hypovirus 1 (strain Euro7)

Query: 3 NWKAGFRL 10
NWK GFRL
Sbjct: 2328 NWKQGFRL 2335


>sp|YL381_MIMIV|UNCHARACTERIZED protein L381|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 FNWKAG 7
FNWK+G
Sbjct: 264 FNWKSG 269


>sp|VG54_BPML5|GENE 54 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 3 NWKAGFRL 10
NW++GF L
Sbjct: 219 NWQSGFAL 226


>sp|POL2_GFLVN|RNA2 polyprotein|Grapevine fanleaf virus (isolate NW)

Query: 2 FNWKAGF 8
F+WK GF
Sbjct: 60 FSWKVGF 66


>sp|GLYCO_KHUV|GLYCOPROTEIN virus (KHUV)

Query: 1 AFNWKAG 7
A+NWKA
Sbjct: 116 AYNWKAA 122


>sp|GLYCO_ARAV|GLYCOPROTEIN virus (ARAV)

Query: 1 AFNWKA 6
A+NWKA
Sbjct: 116 AYNWKA 121


>sp|MB43_GAHVM|MEMBRANE protein UL43 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 2 FNWKAGF 8
WKAGF
Sbjct: 181 LTWKAGF 187


>sp|VG29_BPML5|GENE 29 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 4 WKAGFR 9
WK GFR
Sbjct: 47 WKCGFR 52


>sp|L_GOGV|RNA-DIRECTED RNA polymerase L|Alethinophid 1 reptarenavirus (isolate

Query: 3 NWKAG 7
NWKAG
Sbjct: 834 NWKAG 838


>sp|GAG_FIVSD|GAG polyprotein|Feline immunodeficiency virus (strain San

Query: 3 NWKAG 7
NWKAG
Sbjct: 419 NWKAG 423


>sp|GAG_FIVPE|GAG polyprotein|Feline immunodeficiency virus (isolate Petaluma)

Query: 3 NWKAG 7
NWKAG
Sbjct: 419 NWKAG 423


>sp|GAG_FIVWO|GAG polyprotein|Feline immunodeficiency virus (isolate Wo)

Query: 3 NWKAG 7
NWKAG
Sbjct: 419 NWKAG 423


>sp|VG54_BPMD2|GENE 54 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 3 NWKAGFRL 10
NW++GF L
Sbjct: 219 NWQSGFGL 226


>sp|VG29_BPMD2|GENE 29 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 4 WKAGFR 9
WK GFR
Sbjct: 47 WKCGFR 52


>sp|POLB_CHPVE|ORFB polyprotein|Cryphonectria hypovirus 1 (strain EP713)

Query: 3 NWKAGFRL 10
NWK F+L
Sbjct: 2329 NWKRNFKL 2336




190|SequenceR|955|946|NDYANAFNWK

>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)

Query: 5 NAFNWK 10
NA+NWK
Sbjct: 115 NAYNWK 120


>sp|AKT_MLVAT|AKT kinase-transforming protein|AKT8 murine leukemia virus

Query: 1 NDYANAFNW 9
NDY A +W
Sbjct: 345 NDYGRAVDW 353


>sp|VP2_BRD|STRUCTURAL core protein VP2|Broadhaven virus (BRD)

Query: 1 NDYANAFNW 9
+DY NA W
Sbjct: 233 DDYRNAMQW 241


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 3 YANAFNW 9
Y +AFNW
Sbjct: 2301 YTSAFNW 2307


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 3 YANAFNW 9
Y +AFNW
Sbjct: 2301 YTSAFNW 2307


>sp|Y23K_BPP22|UNCHARACTERIZED 22.8 kDa protein in|Salmonella phage P22 (Bacteriophage P22)

Query: 3 YANAFNW 9
Y NAFNW
Sbjct: 127 YINAFNW 133


>sp|VG10_EHV2|UNCHARACTERIZED gene 10 protein|Equine herpesvirus 2 (strain 86/87)

Query: 1 NDYANAFNWK 10
N Y AF W+
Sbjct: 185 NTYTMAFKWE 194


>sp|P3_RDVF|OUTER capsid protein P3|Rice dwarf virus (isolate Fujian)

Query: 1 NDYANAFN 8
N YANA N
Sbjct: 608 NTYANAVN 615


>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 DYANAFNW 9
DYA F W
Sbjct: 361 DYARQFRW 368


>sp|P3_RDVA|OUTER capsid protein P3|Rice dwarf virus (isolate Akita)

Query: 1 NDYANAFN 8
N YANA N
Sbjct: 608 NTYANAVN 615


>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 DYANAFNW 9
DYA F W
Sbjct: 361 DYARQFRW 368


>sp|CAP8_ADE12|PRE-HEXON-LINKING protein VIII|Human adenovirus A serotype 12

Query: 2 DYANAFNW 9
DY++ NW
Sbjct: 26 DYSSKMNW 33


>sp|HEMA_I80A8|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/833/1980

Query: 1 NDYANAFNW 9
ND+ N NW
Sbjct: 157 NDFFNRLNW 165


>sp|ITP_SHV21|INNER tegument protein|Saimiriine herpesvirus 2 (strain 11)

Query: 3 YANAFNWK 10
+AN F+WK
Sbjct: 415 HANKFSWK 422


>sp|HEMA_I76AK|HEMAGGLUTININ A virus (strain A/Duck/New

Query: 1 NDYANAFNW 9
ND+ N NW
Sbjct: 157 NDFFNRLNW 165


>sp|HEMA_I76A1|HEMAGGLUTININ A virus (strain A/Duck/Alberta/28/1976

Query: 1 NDYANAFNW 9
ND+ N NW
Sbjct: 157 NDFFNRLNW 165


>sp|HEMA_I79A7|HEMAGGLUTININ A virus (strain A/Grey

Query: 1 NDYANAFNW 9
ND+ N NW
Sbjct: 157 NDFFNRLNW 165


>sp|HEMA_I77AG|HEMAGGLUTININ A virus (strain A/Budgerigar/Hokkaido/1/1977

Query: 1 NDYANAFNW 9
ND+ N NW
Sbjct: 157 NDFFNRLNW 165


>sp|RDRP_AQRVG|RNA-DIRECTED RNA polymerase VP2|Aquareovirus G (isolate American grass

Query: 2 DYANAFNW 9
DY +F W
Sbjct: 768 DYGTSFGW 775


>sp|CAP8_ADE41|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 41

Query: 2 DYANAFNW 9
DY++ NW
Sbjct: 26 DYSSRMNW 33


>sp|CAP8_ADE40|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 40

Query: 2 DYANAFNW 9
DY++ NW
Sbjct: 26 DYSSRMNW 33


>sp|VF111_ASFP4|UNCHARACTERIZED protein E111R|African swine fever virus (isolate

Query: 3 YANAFNW 9
Y NAF W
Sbjct: 57 YKNAFEW 63


>sp|VF111_ASFM2|UNCHARACTERIZED protein E111R|African swine fever virus (isolate

Query: 3 YANAFNW 9
Y NAF W
Sbjct: 57 YKNAFEW 63


>sp|PK1_NPVOP|SERINE/THREONINE-PROTEIN kinase 1|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 1 NDYANAFNW 9
++YA +F+W
Sbjct: 180 HNYARSFDW 188


>sp|VF111_ASFWA|UNCHARACTERIZED protein E111R|African swine fever virus (isolate

Query: 3 YANAFNW 9
Y NAF W
Sbjct: 57 YKNAFEW 63


>sp|DPOL_MIMIV|DNA polymerase|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 DYANAFNWK 10
DY+ + NWK
Sbjct: 198 DYSFSVNWK 206




191|SequenceR|960|951|AVFVHNDYAN

>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote

Query: 2 VFVHNDYA 9
VF+HND+A
Sbjct: 96 VFLHNDFA 103


>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)

Query: 1 AVFVHND 7
+FVHND
Sbjct: 812 GIFVHND 818


>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 1 AVFVHND 7
+FVHND
Sbjct: 812 GIFVHND 818


>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 1 AVFVHND 7
+FVHND
Sbjct: 812 GIFVHND 818


>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 1 AVFVHND 7
+FVHND
Sbjct: 812 GIFVHND 818


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 1 AVFVHND 7
VF+HND
Sbjct: 809 GVFIHND 815


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 1 AVFVHND 7
VF+HND
Sbjct: 805 GVFIHND 811


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 1 AVFVHND 7
VF+HND
Sbjct: 809 GVFIHND 815


>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)

Query: 1 AVFVHND 7
+FVHND
Sbjct: 740 GIFVHND 746


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 1 AVFVHND 7
+FVHND
Sbjct: 812 GIFVHND 818


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 1 AVFVHND 7
+FVHND
Sbjct: 812 GIFVHND 818


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 1 AVFVHND 7
+FVHND
Sbjct: 812 GIFVHND 818


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 1 AVFVHND 7
+FVHND
Sbjct: 812 GIFVHND 818


>sp|DUT_ALHV1|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Alcelaphine herpesvirus 1

Query: 2 VFVHNDY 8
VF+HND+
Sbjct: 224 VFMHNDH 230


>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVFVHN
Sbjct: 1327 AVFVHN 1332


>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVFVHN
Sbjct: 1325 AVFVHN 1330


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 5 HNDYAN 10
HND+AN
Sbjct: 887 HNDWAN 892


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 5 HNDYAN 10
HND+AN
Sbjct: 887 HNDWAN 892


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 5 HNDYAN 10
HND+AN
Sbjct: 887 HNDWAN 892


>sp|VE94_NPVAC|EARLY 94 kDa protein|Autographa californica nuclear polyhedrosis virus

Query: 4 VHNDYAN 10
VHN+YAN
Sbjct: 743 VHNEYAN 749


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 5 HNDYAN 10
HND+AN
Sbjct: 887 HNDWAN 892


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 1 AVFVHND 7
+F+HND
Sbjct: 811 GIFIHND 817


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 1 AVFVHND 7
+F+HND
Sbjct: 804 GIFIHND 810


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 1 AVFVHND 7
+F+HND
Sbjct: 811 GIFIHND 817


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 1 AVFVHND 7
+F+HND
Sbjct: 804 GIFIHND 810


>sp|VP5_AQRVG|MICROTUBULE-ASSOCIATED protein VP5|Aquareovirus G (isolate American grass

Query: 2 VFVHNDY 8
VF H+DY
Sbjct: 519 VFAHSDY 525


>sp|CAPSD_ASPVP|CAPSID protein|Apple stem pitting virus (isolate

Query: 5 HNDYAN 10
HNDYA+
Sbjct: 120 HNDYAS 125


>sp|PORTL_BPG20|PORTAL protein|Thermus phage G20c (Thermus thermophilus

Query: 2 VFVHND 7
VF+HND
Sbjct: 200 VFLHND 205


>sp|PORTL_BP234|PORTAL protein|Thermus virus P23-45 (Thermus thermophilus

Query: 2 VFVHND 7
VF+HND
Sbjct: 200 VFLHND 205


>sp|POL_SIVMB|GAG-POL polyprotein|Simian immunodeficiency virus (isolate MB66)

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1325 AVFIHN 1330


>sp|POL_SIVEK|GAG-POL polyprotein|Simian immunodeficiency virus (isolate EK505)

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1335 AVFIHN 1340


>sp|POL_SIVCZ|GAG-POL polyprotein|Simian immunodeficiency virus (isolate CPZ

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1275 AVFIHN 1280


>sp|POL_HV1Z6|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 39 AVFIHN 44


>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1327 AVFIHN 1332


>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1336 AVFIHN 1341


>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1336 AVFIHN 1341


>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1326 AVFIHN 1331


>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1321 AVFIHN 1326


>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1327 AVFIHN 1332


>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1319 AVFIHN 1324


>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1324 AVFIHN 1329


>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1323 AVFIHN 1328


>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1323 AVFIHN 1328


>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1327 AVFIHN 1332


>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1325 AVFIHN 1330


>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1323 AVFIHN 1328


>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1326 AVFIHN 1331


>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1321 AVFIHN 1326


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1332 AVFIHN 1337


>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1331 AVFIHN 1336


>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1325 AVFIHN 1330


>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1326 AVFIHN 1331


>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1330 AVFIHN 1335


>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1326 AVFIHN 1331


>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1330 AVFIHN 1335


>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1326 AVFIHN 1331


>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1338 AVFIHN 1343


>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1326 AVFIHN 1331


>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1338 AVFIHN 1343


>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1338 AVFIHN 1343


>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1328 AVFIHN 1333


>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1326 AVFIHN 1331


>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1321 AVFIHN 1326


>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1321 AVFIHN 1326


>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1321 AVFIHN 1326


>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1322 AVFIHN 1327


>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 AVFVHN 6
AVF+HN
Sbjct: 1326 AVFIHN 1331


>sp|007R_IIV3|UNCHARACTERIZED protein 007R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 AVFVHNDYA 9
+VFVHN A
Sbjct: 355 SVFVHNKVA 363


>sp|RDRP_ROTS1|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/SA11-Both/G3P5B[2]) (RV-A)

Query: 1 AVFVHNDY 8
+VF H+DY
Sbjct: 216 SVFSHDDY 223


>sp|RDRP_ROTSP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/SA11-Patton/G3P[X]) (RV-A)

Query: 1 AVFVHNDY 8
+VF H+DY
Sbjct: 216 SVFSHDDY 223


>sp|ENLYS_BP263|ENDOLYSIN 2638A|Staphylococcus phage 2638A

Query: 1 AVFVHNDYAN 10
V +HNDY +
Sbjct: 202 GVVIHNDYGS 211


>sp|RDRP_ROTSH|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Monkey/South

Query: 1 AVFVHNDY 8
+VF H+DY
Sbjct: 216 SVFSHDDY 223




192|SequenceR|965|956|YILRGAVFVH

>sp|DPOL_WMHBV|PROTEIN P|Woolly monkey hepatitis B virus

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 760 WILRGTCFVY 769


>sp|Y048_OSHVF|UNCHARACTERIZED protein ORF48|Ostreid herpesvirus 1 (isolate France)

Query: 1 YILRGAVFV 9
Y+LRGA+ V
Sbjct: 79 YLLRGAISV 87


>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 769 WILRGTSFVY 778


>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 769 WILRGTSFVY 778


>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 770 WILRGTSFVY 779


>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 770 WILRGTSFVY 779


>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 770 WILRGTSFVY 779


>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 769 WILRGTYFVY 778


>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 770 WILRGTSFVY 779


>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 770 WILRGTSFVY 779


>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 770 WILRGTSFVY 779


>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 770 WILRGTSFVY 779


>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 770 WILRGTSFVY 779


>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 772 WILRGTSFVY 781


>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 770 WILRGTSFVY 779


>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 770 WILRGTSFVY 779


>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 770 WILRGTSFVY 779


>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 770 WILRGTSFVY 779


>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 770 WILRGTSFVY 779


>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 770 WILRGTSFVY 779


>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 770 WILRGTSFVY 779


>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 770 WILRGTSFVY 779


>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 770 WILRGTSFVY 779


>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 765 WILRGTSFVY 774


>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 765 WILRGTSFVY 774


>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 770 WILRGTSFVY 779


>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 772 WILRGTSFVY 781


>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 772 WILRGTSFVY 781


>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 769 WILRGTSFVY 778


>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 770 WILRGTSFVY 779


>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 769 WILRGTSFVY 778


>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 770 WILRGTSFVY 779


>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 765 WILRGTSFVY 774


>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 759 WILRGTSFVY 768


>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 770 WILRGTSFVY 779


>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 772 WILRGTSFVY 781


>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 772 WILRGTSFVY 781


>sp|DPOL_HBVGO|PROTEIN P|Gorilla hepatitis B virus (isolate

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 759 WILRGTSFVY 768


>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 769 WILRGTSFVY 778


>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 759 WILRGTSFVY 768


>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 759 WILRGTSFVY 768


>sp|DPOL_HBVCP|PROTEIN P|Chimpanzee hepatitis B virus (isolate

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 759 WILRGTSFVY 768


>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 770 WILRGTSFVY 779


>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 770 WILRGTSFVY 779


>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 759 WILRGTSFVY 768


>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 759 WILRGTSFVY 768


>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 772 WILRGTSFVY 781


>sp|DPOL_HBVOR|PROTEIN P|Orangutan hepatitis B virus (isolate

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 759 WILRGTSFVY 768


>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 769 WILRGTSFVY 778


>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 759 WILRGTSFVY 768


>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C

Query: 1 YILRGAVFVH 10
+ILRG FV+
Sbjct: 770 WILRGTSFVY 779


>sp|Y1334_ATV|PUTATIVE transmembrane protein ORF1334|Acidianus two-tailed virus (ATV)

Query: 2 ILRGAVFVH 10
+L G+V+VH
Sbjct: 1144 VLNGSVYVH 1152




193|SequenceR|970|961|IINLCYILRG

>sp|MATRX_BEFVB|MATRIX protein|Bovine ephemeral fever virus (strain

Query: 2 INLCYILRG 10
INLCY L+G
Sbjct: 205 INLCYNLKG 213


>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 IINLCYILRG 10
+++ CYILRG
Sbjct: 266 LLSKCYILRG 275


>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 IINLCYILRG 10
+++ CYILRG
Sbjct: 266 LLSKCYILRG 275


>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 IINLCYILRG 10
+++ CYILRG
Sbjct: 266 LLSKCYILRG 275


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 2 INLCYILRG 10
I LC+I+RG
Sbjct: 2497 IGLCHIMRG 2505


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 2 INLCYILRG 10
I LC+I+RG
Sbjct: 2494 IGLCHIMRG 2502


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 2 INLCYILRG 10
I LC+I+RG
Sbjct: 2497 IGLCHIMRG 2505


>sp|POLG_AEVVR|GENOME polyprotein|Avian encephalomyelitis virus (strain Van

Query: 1 IINLCYIL 8
++N+CY+L
Sbjct: 1958 VVNICYVL 1965


>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 NLCYILRG 10
NLC +LRG
Sbjct: 864 NLCKLLRG 871


>sp|POLG_DWV|GENOME polyprotein|Deformed wing virus (DWV)

Query: 5 CYILRG 10
CY+LRG
Sbjct: 2525 CYLLRG 2530


>sp|POLG_FCV|GENOME polyprotein|Feline calicivirus (FCV)

Query: 1 IINLCYILRG 10
+++LC+ +RG
Sbjct: 781 LVHLCHFIRG 790


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3 NLCYILRG 10
NLC ++RG
Sbjct: 889 NLCRLIRG 896


>sp|POL_SIVVG|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 3 NLCYILRG 10
NLC ++RG
Sbjct: 893 NLCKLIRG 900


>sp|POL_SIVV1|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 3 NLCYILRG 10
N+C +LRG
Sbjct: 892 NICKLLRG 899


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 4 LCYILRG 10
LC+++RG
Sbjct: 2500 LCHVMRG 2506


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 4 LCYILRG 10
LC+++RG
Sbjct: 2498 LCHVMRG 2504


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 4 LCYILRG 10
LC+++RG
Sbjct: 2498 LCHVMRG 2504


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 4 LCYILRG 10
LC+++RG
Sbjct: 2498 LCHVMRG 2504


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 4 LCYILRG 10
LC+++RG
Sbjct: 2498 LCHVMRG 2504


>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 IINLCYILRG 10
+ +LC +LRG
Sbjct: 861 VTHLCKLLRG 870


>sp|VU25_HHV7J|PROTEIN U25|Human herpesvirus 7 (strain JI)

Query: 2 INLCYILR 9
IN+C+IL+
Sbjct: 161 INVCFILK 168


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 4 LCYILRG 10
LC+++RG
Sbjct: 2500 LCHVIRG 2506


>sp|PG176_VACCW|PROTEIN OPG176|Vaccinia virus (strain Western Reserve)

Query: 3 NLCYILRG 10
NLC LRG
Sbjct: 203 NLCKYLRG 210


>sp|POLG_AEVCA|GENOME polyprotein|Avian encephalomyelitis virus (strain Calnek

Query: 1 IINLCYIL 8
++N+C++L
Sbjct: 1958 VVNICHVL 1965


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 1 IINLCYILRG 10
++ +C +LRG
Sbjct: 918 LVKICSLLRG 927


>sp|PG176_MONPV|PROTEIN OPG176|Monkeypox virus (MPXV)

Query: 3 NLCYILRG 10
NLC LRG
Sbjct: 203 NLCKYLRG 210


>sp|PG176_VAR67|PROTEIN OPG176|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3 NLCYILRG 10
NLC LRG
Sbjct: 203 NLCKYLRG 210


>sp|MB43_VZVO|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 1 IINLCYI 7
IINLCY+
Sbjct: 394 IINLCYL 400


>sp|MB43_VZVD|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 IINLCYI 7
IINLCY+
Sbjct: 394 IINLCYL 400




194|SequenceR|975|966|RVYWFIINLC

>sp|YL167_MIMIV|UNCHARACTERIZED protein L167|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 RVYWFI 6
R+YWFI
Sbjct: 33 RLYWFI 38


>sp|RPB2_IIV6|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 6

Query: 5 FIINLC 10
FIINLC
Sbjct: 1132 FIINLC 1137


>sp|VG64_ICHVA|UNCHARACTERIZED protein ORF64|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 VYWFIINLC 10
++W I N+C
Sbjct: 434 LFWVIANIC 442


>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 YWFIIN 8
YW++IN
Sbjct: 80 YWYLIN 85


>sp|NPH2_MSEPV|RNA helicase NPH-II|Melanoplus sanguinipes entomopoxvirus (MsEPV)

Query: 1 RVYWFIINLC 10
++YW IN+C
Sbjct: 66 KLYWHNINIC 75


>sp|YORF3_NORAV|UNCHARACTERIZED ORF3 protein|Nora virus

Query: 1 RVYWFIIN 8
R+Y F+IN
Sbjct: 197 RIYKFVIN 204


>sp|DPOL_BPNF|DNA polymerase|Bacillus phage Nf (Bacteriophage Nf)

Query: 4 WFIINLC 10
W++I++C
Sbjct: 97 WYMIDIC 103


>sp|DPOL_BPM2|DNA polymerase|Bacillus phage M2 (Bacteriophage M2)

Query: 4 WFIINLC 10
W++I++C
Sbjct: 97 WYMIDIC 103


>sp|DPOL_BPB03|DNA polymerase|Bacillus phage B103 (Bacteriophage B103)

Query: 4 WFIINLC 10
W++I++C
Sbjct: 97 WYMIDIC 103


>sp|VP4_ROTBK|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 YWFIIN 8
YW+++N
Sbjct: 80 YWYLVN 85


>sp|GC_PSHV1|ENVELOPE glycoprotein C|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 VYWFIIN 8
V WF+IN
Sbjct: 273 VKWFLIN 279


>sp|POLG_TRMVU|GENOME polyprotein|Triticum mosaic virus (isolate Triticum

Query: 2 VYWFIIN 8
+YW I+N
Sbjct: 2943 IYWCIVN 2949


>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 YWFIIN 8
YWF+I+
Sbjct: 80 YWFLIS 85


>sp|DPOL_BPPZA|DNA polymerase|Bacillus phage PZA (Bacteriophage PZA)

Query: 4 WFIINLC 10
W++I++C
Sbjct: 97 WYMIDIC 103


>sp|DPOL_BPPH2|DNA polymerase|Bacillus phage phi29 (Bacteriophage phi-29)

Query: 4 WFIINLC 10
W++I++C
Sbjct: 100 WYMIDIC 106


>sp|RDRP_BNYVS|REPLICASE necrotic yellow vein virus

Query: 2 VYWFIINL 9
VY++++NL
Sbjct: 673 VYFYVVNL 680


>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)

Query: 4 WFIINL 9
WF+IN+
Sbjct: 1332 WFLINI 1337


>sp|KITH_EHV4|THYMIDINE kinase|Equine herpesvirus 4 (strain 1942)

Query: 2 VYWFIINLC 10
VY+ ++N C
Sbjct: 214 VYFMLVNTC 222


>sp|VG65_ICHVA|UNCHARACTERIZED protein ORF65|Ictalurid herpesvirus 1 (strain Auburn)

Query: 5 FIINLC 10
FI+N+C
Sbjct: 524 FIVNIC 529


>sp|CAPSD_APRVF|INNER capsid protein VP3|Aedes pseudoscutellaris reovirus (isolate

Query: 2 VYWFIINLC 10
+ WF+ +C
Sbjct: 465 INWFLFRIC 473




195|SequenceR|980|971|LFDLLRVYWF

>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)

Query: 1 LFDLLRVYW 9
LFD LR+Y+
Sbjct: 31 LFDNLRIYF 39


>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 LFDLLRVYW 9
LFD LR+Y+
Sbjct: 31 LFDNLRIYF 39


>sp|VP3_ROTCC|PROTEIN VP3|Rotavirus A (strain RVA/Chicken/Ireland/Ch2/1979/G7P[X]) (RV-A)

Query: 1 LFDLLRVYWF 10
L+DLL+VY F
Sbjct: 290 LYDLLQVYNF 299


>sp|YL361_MIMIV|UNCHARACTERIZED protein L361|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 FDLLRVYWF 10
FD+ R YW
Sbjct: 159 FDISRTYWL 167


>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 LFDLLRVY 8
L DLLRVY
Sbjct: 50 LVDLLRVY 57


>sp|VU3_HHV6Z|PROTEIN U3|Human herpesvirus 6B (strain Z29)

Query: 1 LFDLLRVY 8
L DLLRVY
Sbjct: 63 LVDLLRVY 70




196|SequenceR|985|976|QQNVALFDLL

>sp|Y011_NPVOP|UNCHARACTERIZED 37.2 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 QQNVALFDLL 10
+Q ALFDLL
Sbjct: 292 RQKNALFDLL 301


>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus

Query: 1 QQNVALFDLL 10
++NV +FDL+
Sbjct: 99 EENVKIFDLV 108


>sp|CAP9_ADE12|HEXON-INTERLACING protein IX|Human adenovirus A serotype 12

Query: 1 QQNVALFD 8
Q N ALFD
Sbjct: 6 QNNAALFD 13


>sp|V234_FOWPN|PUTATIVE ankyrin repeat protein FPV234|Fowlpox virus (strain NVSL) (FPV)

Query: 2 QNVALFDLL 10
Q+++LFDLL
Sbjct: 318 QDLSLFDLL 326




197|SequenceR|990|981|VYPGAQQNVA

>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 3 PGAQQNV 9
PGA+QNV
Sbjct: 405 PGAKQNV 411


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 3 PGAQQNV 9
PG+QQN+
Sbjct: 405 PGSQQNI 411


>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)

Query: 3 PGAQQNV 9
PGA+QNV
Sbjct: 405 PGAKQNV 411


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3 PGAQQNV 9
PGA+QN+
Sbjct: 405 PGAKQNI 411


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 3 PGAQQNV 9
PGA+QN+
Sbjct: 405 PGAKQNI 411


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 3 PGAQQNV 9
PGA+QN+
Sbjct: 404 PGAKQNI 410




198|SequenceR|995|986|KGIMMVYPGA

>sp|VG43_ICHVA|UNCHARACTERIZED protein ORF43|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 KGIMMVYP 8
KGI+ VYP
Sbjct: 52 KGILKVYP 59


>sp|CP_CSVMV|PUTATIVE Polyprotein CP|Cassava vein mosaic virus (CsVMV)

Query: 1 KGIMMVYP 8
KGI VYP
Sbjct: 282 KGIQTVYP 289


>sp|POLS_IPNVN|STRUCTURAL polyprotein|Infectious pancreatic necrosis virus (strain

Query: 2 GIMMVYPGA 10
GI++ +PGA
Sbjct: 51 GILVCFPGA 59


>sp|POLS_IPNVS|STRUCTURAL polyprotein|Infectious pancreatic necrosis virus (strain

Query: 2 GIMMVYPGA 10
G+++ +PGA
Sbjct: 51 GVLVCFPGA 59


>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3

Query: 1 KGIMMVYPG 9
KGI YPG
Sbjct: 129 KGIKPYYPG 137




199|SequenceR|1000|991|MNAVMKGIMM

>sp|L_TIBVC|RNA-DIRECTED RNA polymerase L|Tibrogargan virus (strain CS132) (TIBV)

Query: 1 MNAVMKG 7
MNAVMKG
Sbjct: 762 MNAVMKG 768


>sp|VP4_FDVS|UNCHARACTERIZED protein VP4|Fiji disease virus (isolate Sugarcane)

Query: 2 NAVMKGIMM 10
N V+KG+M+
Sbjct: 1033 NLVLKGVML 1041


>sp|Y112_OSHVF|UNCHARACTERIZED protein ORF112|Ostreid herpesvirus 1 (isolate France)

Query: 2 NAVMKGIM 9
NAV+ GIM
Sbjct: 163 NAVLSGIM 170


>sp|P8_RDVS|OUTER capsid protein P8|Rice dwarf virus (isolate S)

Query: 2 NAVMKGI 8
NA+MKG+
Sbjct: 137 NAIMKGL 143


>sp|P8_RDVO|OUTER capsid protein P8|Rice dwarf virus (isolate O)

Query: 2 NAVMKGI 8
NA+MKG+
Sbjct: 137 NAIMKGL 143


>sp|P8_RDVF|OUTER capsid protein P8|Rice dwarf virus (isolate Fujian)

Query: 2 NAVMKGI 8
NA+MKG+
Sbjct: 137 NAIMKGL 143


>sp|P8_RDVA|OUTER capsid protein P8|Rice dwarf virus (isolate Akita)

Query: 2 NAVMKGI 8
NA+MKG+
Sbjct: 137 NAIMKGL 143




200|SequenceR|1005|996|VVIYFMNAVM

***** No hits found ******


201|SequenceR|1010|1001|VLAMIVVIYF

***** No hits found ******


202|SequenceR|1015|1006|GFSLLVLAMI

***** No hits found ******


203|SequenceR|1020|1011|AKRPVGFSLL

>sp|VIE1_MUHVS|IMMEDIATE-EARLY protein 1|Murid herpesvirus 1 (strain Smith)

Query: 4 PVGFSLL 10
PVGFSL+
Sbjct: 537 PVGFSLM 543


>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)

Query: 1 AKRPVGFSLL 10
A+RP G SLL
Sbjct: 170 AERPFGVSLL 179


>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 AKRPVGFSLL 10
A+RP G SLL
Sbjct: 170 AERPFGVSLL 179


>sp|VG10_EHV2|UNCHARACTERIZED gene 10 protein|Equine herpesvirus 2 (strain 86/87)

Query: 2 KRPVGFSLL 10
K+P+ FSL+
Sbjct: 110 KKPISFSLV 118


>sp|SPIKE_BCRP3|SPIKE glycoprotein|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 4 PVGFSLL 10
P+GFS+L
Sbjct: 214 PIGFSVL 220


>sp|POL_SMRVH|GAG-PRO-POL polyprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 1 AKRPVGFSL 9
A+ P+GFS+
Sbjct: 1761 ARSPLGFSM 1769




204|SequenceR|1025|1016|HPYLIAKRPV

>sp|L_CPXVB|RNA-DIRECTED RNA polymerase L|Cupixi mammarenavirus (isolate Rat/Brasil/BeAn

Query: 1 HPYLIAKRPV 10
HP + K+P+
Sbjct: 2016 HPLMTGKKPI 2025


>sp|YVFD_VACCC|UNCHARACTERIZED 9.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 HPYLIAKRPV 10
HP+++ K P+
Sbjct: 6 HPFIVQKAPI 15


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 PYLIAKRP 9
PYLI ++P
Sbjct: 552 PYLILRKP 559


>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 2 PYLIAKRP 9
PYLI ++P
Sbjct: 552 PYLILRKP 559


>sp|PK1_ASFWA|SERINE/THREONINE-PROTEIN kinase 1|African swine fever virus (isolate

Query: 1 HPYLIAKRPV 10
H Y IA RP+
Sbjct: 35 HMYFIATRPM 44


>sp|PK1_ASFP4|SERINE/THREONINE-PROTEIN kinase 1|African swine fever virus (isolate

Query: 1 HPYLIAKRPV 10
H Y IA RP+
Sbjct: 35 HMYFIATRPM 44


>sp|PK1_ASFB7|SERINE/THREONINE-PROTEIN kinase 1|African swine fever virus (strain

Query: 1 HPYLIAKRPV 10
H Y IA RP+
Sbjct: 35 HMYFIATRPM 44


>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16

Query: 1 HPYLIAKRP 9
HPY K+P
Sbjct: 47 HPYFPIKKP 55


>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7

Query: 1 HPYLIAKRP 9
HPY K+P
Sbjct: 46 HPYFELKKP 54


>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40

Query: 1 HPYLIAKRP 9
HPY K+P
Sbjct: 46 HPYFELKKP 54




205|SequenceR|1030|1021|WSPAEHPYLI

>sp|MCE_PBCV1|MRNA-CAPPING enzyme|Paramecium bursaria Chlorella virus 1

Query: 1 WSPAEHPYLI 10
W P EHP +I
Sbjct: 190 WIPLEHPTII 199


>sp|VP7_BTV1A|CORE protein VP7|Bluetongue virus 1 (isolate Australia)

Query: 1 WSPAEHPY 8
W PA PY
Sbjct: 119 WGPARQPY 126


>sp|VP7_BTV11|CORE protein VP7|Bluetongue virus 11 (isolate USA)

Query: 1 WSPAEHPY 8
W PA PY
Sbjct: 119 WGPARQPY 126


>sp|VP7_BTV10|CORE protein VP7|Bluetongue virus 10 (isolate USA)

Query: 1 WSPAEHPY 8
W PA PY
Sbjct: 119 WGPARQPY 126


>sp|VP7_BTV17|CORE protein VP7|Bluetongue virus 17 (isolate USA)

Query: 1 WSPAEHPY 8
W PA PY
Sbjct: 119 WGPARQPY 126


>sp|VP7_BTV2A|CORE protein VP7|Bluetongue virus 2 (isolate USA)

Query: 1 WSPAEHPY 8
W PA PY
Sbjct: 119 WGPARQPY 126


>sp|VP7_BTV1S|CORE protein VP7|Bluetongue virus 1 (isolate South

Query: 1 WSPAEHPY 8
W PA PY
Sbjct: 119 WGPARQPY 126


>sp|VP7_BTV13|CORE protein VP7|Bluetongue virus 13 (isolate USA)

Query: 1 WSPAEHPY 8
W PA PY
Sbjct: 119 WGPARQPY 126


>sp|HEPA_GAHVM|DNA helicase/primase complex-associated protein|Gallid herpesvirus 2

Query: 1 WSPAEHPY 8
WSP HP+
Sbjct: 377 WSPENHPF 384


>sp|ALC_BPT4|PROTEIN alc|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 SPAEHPYLI 10
SPAEH LI
Sbjct: 142 SPAEHHILI 150


>sp|POL2_BBWV2|RNA2 polyprotein|Broad bean wilt virus 2

Query: 1 WSPAEHPYL 9
W+PA PY+
Sbjct: 583 WNPAIEPYV 591


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 3 PAEHPY 8
P EHPY
Sbjct: 1274 PGEHPY 1279


>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 WSPAEHPY 8
WSP+ PY
Sbjct: 34 WSPSNTPY 41


>sp|POLN_CRPVC|REPLICASE polyprotein|Cricket paralysis virus (isolate

Query: 4 AEHPYL 9
+EHPYL
Sbjct: 830 SEHPYL 835


>sp|UL13_SUHVN|SERINE/THREONINE-PROTEIN kinase UL13|Suid herpesvirus 1 (strain NIA-3)

Query: 3 PAEHPYLI 10
P E PYLI
Sbjct: 52 PREAPYLI 59


>sp|GH_GPCMV|ENVELOPE glycoprotein H|Guinea pig cytomegalovirus (strain 22122)

Query: 2 SPAEHP 7
SPA+HP
Sbjct: 598 SPAQHP 603


>sp|YL612_MIMIV|UNCHARACTERIZED protein L612|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 WSPAEHP 7
+SPA+HP
Sbjct: 110 YSPADHP 116


>sp|VE6_HPV39|PROTEIN E6|Human papillomavirus 39

Query: 2 SPAEHPY 8
+PAE PY
Sbjct: 6 NPAERPY 12


>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)

Query: 1 WSPAEHPY 8
W P + PY
Sbjct: 307 WDPVDTPY 314


>sp|NSP4_ROTH3|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain

Query: 1 WSPAEHPY 8
W+ E+PY
Sbjct: 159 WAEGENPY 166


>sp|NSP4_ROTF6|NON-STRUCTURAL glycoprotein 4|Rotavirus A (isolate

Query: 1 WSPAEHPY 8
W+ E+PY
Sbjct: 159 WAEGENPY 166


>sp|NSP4_ROTCU|NON-STRUCTURAL glycoprotein 4|Rotavirus A (isolate RVA/Dog/United

Query: 1 WSPAEHPY 8
W+ E+PY
Sbjct: 159 WAEGENPY 166


>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote

Query: 2 SPAEHP 7
SPA+HP
Sbjct: 3220 SPADHP 3225


>sp|VP40_EBORE|MATRIX protein VP40|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 2 SPAEHPY 8
SPA HPY
Sbjct: 316 SPASHPY 322


>sp|VP3_ROTEL|PROTEIN VP3|Rotavirus A (isolate RVA/Equine/United

Query: 1 WSPAEHPY 8
W P + PY
Sbjct: 307 WDPLDTPY 314


>sp|VP40_EBORR|MATRIX protein VP40|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 2 SPAEHPY 8
SPA HPY
Sbjct: 316 SPASHPY 322


>sp|VP3_ROTRF|PROTEIN VP3|Rotavirus A (strain RVA/Cow/France/RF/1975/G6P6[1]) (RV-A)

Query: 1 WSPAEHPY 8
W P + PY
Sbjct: 307 WDPLDTPY 314


>sp|VP3_ROTBU|PROTEIN VP3|Rotavirus A (strain RVA/Cow/United Kingdom/UK/1975/G6P7[5])

Query: 1 WSPAEHPY 8
W P + PY
Sbjct: 307 WDPLDTPY 314


>sp|VP3_ROTBN|PROTEIN VP3|Rotavirus A (strain RVA/Cow/United

Query: 1 WSPAEHPY 8
W P + PY
Sbjct: 307 WDPLDTPY 314


>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])

Query: 1 WSPAEHPY 8
W P + PY
Sbjct: 307 WDPLDTPY 314


>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])

Query: 1 WSPAEHPY 8
W P + PY
Sbjct: 307 WDPLDTPY 314


>sp|VP3_ROTW3|PROTEIN VP3|Rotavirus A (strain RVA/Cow/United States/WC3/1981/G6P7[5])

Query: 1 WSPAEHPY 8
W P + PY
Sbjct: 307 WDPLDTPY 314


>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])

Query: 1 WSPAEHPY 8
W P + PY
Sbjct: 307 WDPLDTPY 314


>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United

Query: 1 WSPAEHPY 8
W P + PY
Sbjct: 307 WDPLDTPY 314


>sp|VP3_ROTSH|PROTEIN VP3|Rotavirus A (isolate RVA/Monkey/South

Query: 1 WSPAEHPY 8
W P + PY
Sbjct: 307 WDPLDTPY 314


>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)

Query: 1 WSPAEHPY 8
W P + PY
Sbjct: 307 WDPLDTPY 314


>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])

Query: 1 WSPAEHPY 8
W P + PY
Sbjct: 307 WDPLDTPY 314


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1 WSPAEHPY 8
+SP E+PY
Sbjct: 138 FSPKENPY 145


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1 WSPAEHPY 8
+SP E+PY
Sbjct: 138 FSPKENPY 145


>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])

Query: 1 WSPAEHPY 8
W P + PY
Sbjct: 307 WDPLDTPY 314


>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])

Query: 1 WSPAEHPY 8
W P + PY
Sbjct: 307 WDPLDTPY 314


>sp|VP3_ROTS1|PROTEIN VP3|Rotavirus A (strain RVA/SA11-Both/G3P5B[2]) (RV-A)

Query: 1 WSPAEHPY 8
W P + PY
Sbjct: 307 WDPLDTPY 314


>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)

Query: 1 WSPAEHPY 8
W P + PY
Sbjct: 307 WDPLDTPY 314


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 1 WSPAEHPY 8
+SP E+PY
Sbjct: 138 FSPKENPY 145


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1 WSPAEHPY 8
+SP E+PY
Sbjct: 138 FSPKENPY 145


>sp|CAPSD_BPPHK|CAPSID protein F|Enterobacteria phage phiK (Bacteriophage phi-K)

Query: 2 SPAEHPYLI 10
SP EH YL+
Sbjct: 296 SPLEHHYLV 304


>sp|VP3_ROTTU|PROTEIN VP3|Rotavirus A (isolate RVA/Monkey/United

Query: 1 WSPAEHPY 8
W P + PY
Sbjct: 307 WDPLDTPY 314


>sp|VE6_HPV70|PROTEIN E6|Human papillomavirus type 70

Query: 2 SPAEHPY 8
+PAE PY
Sbjct: 6 NPAERPY 12


>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)

Query: 1 WSPAEHPY 8
W P + PY
Sbjct: 307 WDPLDTPY 314


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 1 WSPAEHPY 8
+SP E+PY
Sbjct: 138 FSPKENPY 145


>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United

Query: 1 WSPAEHPY 8
W P + PY
Sbjct: 307 WDPLDTPY 314


>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])

Query: 1 WSPAEHPY 8
W P + PY
Sbjct: 307 WDPLDTPY 314


>sp|VP3_ROTP5|PROTEIN VP3|Rotavirus A (strain RVA/Pig/United States/OSU/1977/G5P9[7])

Query: 1 WSPAEHPY 8
W P + PY
Sbjct: 307 WDPLDTPY 314


>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])

Query: 1 WSPAEHPY 8
W P + PY
Sbjct: 307 WDPLDTPY 314


>sp|ENLYS_BPPHV|ENDOLYSIN phage phivML3 (Lactococcus bacteriophage

Query: 1 WSPAEHPY 8
W+P H Y
Sbjct: 99 WAPFSHAY 106


>sp|ENLYS_BPLC2|ENDOLYSIN phage c2

Query: 1 WSPAEHPY 8
W+P H Y
Sbjct: 99 WAPFSHAY 106


>sp|FGR_FSVGR|TYROSINE-PROTEIN kinase transforming protein Fgr|Feline sarcoma virus (strain

Query: 2 SPAEHPYLI 10
+P EHP L+
Sbjct: 119 APEEHPVLL 127




206|SequenceR|1035|1026|DKALTWSPAE

>sp|UBC_ASFK5|UBIQUITIN-CONJUGATING enzyme E2|African swine fever virus (isolate

Query: 1 DKALTWSPAE 10
++ +TWSPA+
Sbjct: 96 ERGMTWSPAQ 105


>sp|UBC_ASFM2|UBIQUITIN-CONJUGATING enzyme E2|African swine fever virus (isolate

Query: 1 DKALTWSPAE 10
++ +TWSPA+
Sbjct: 96 EQGMTWSPAQ 105


>sp|UBC_ASFWA|UBIQUITIN-CONJUGATING enzyme E2|African swine fever virus (isolate

Query: 1 DKALTWSPAE 10
++ +TWSPA+
Sbjct: 96 EQGMTWSPAQ 105


>sp|UBC_ASFB7|UBIQUITIN-CONJUGATING enzyme E2|African swine fever virus (strain

Query: 1 DKALTWSPAE 10
++ +TWSPA+
Sbjct: 96 EQGMTWSPAQ 105


>sp|RDRP_BPMS2|RNA-DIRECTED RNA polymerase beta chain|Escherichia phage MS2 (Bacteriophage MS2)

Query: 1 DKALTWSP 8
DK+L+W P
Sbjct: 94 DKSLSWDP 101


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 1 DKALTWSPAE 10
+ AL W+PAE
Sbjct: 1979 NAALKWTPAE 1988


>sp|GLYCO_NCMV|GLYCOPROTEIN cereal mosaic virus (NCMV)

Query: 2 KALTWSPA 9
K +TW PA
Sbjct: 92 KEITWEPA 99


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 3 ALTWSPAE 10
AL W+PAE
Sbjct: 1981 ALKWTPAE 1988


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 3 ALTWSPAE 10
AL W+PAE
Sbjct: 1981 ALKWTPAE 1988


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 3 ALTWSPAE 10
AL W+PAE
Sbjct: 1981 ALKWTPAE 1988


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 3 ALTWSPAE 10
AL W+PAE
Sbjct: 1981 ALKWTPAE 1988


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 3 ALTWSPAE 10
AL W+PAE
Sbjct: 1981 ALKWTPAE 1988


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 3 ALTWSPAE 10
AL W+PAE
Sbjct: 1981 ALKWTPAE 1988


>sp|UBC_ASFP4|UBIQUITIN-CONJUGATING enzyme E2|African swine fever virus (isolate

Query: 1 DKALTWSPAE 10
++ +TWSP +
Sbjct: 96 EQGMTWSPVQ 105


>sp|VP17_BPPRD|PROTEIN P17|Enterobacteria phage PRD1 (Bacteriophage PRD1)

Query: 1 DKALTWSPAE 10
+KAL SPAE
Sbjct: 57 EKALDISPAE 66




207|SequenceR|1040|1031|PHFVIDKALT

>sp|YR470_MIMIV|PUTATIVE DNA directed RNA polymerase|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PHFVIDKAL 9
PH +IDK L
Sbjct: 311 PHLLIDKIL 319


>sp|DNMT_FRG3G|PROBABLE DNA (cytosine-5)-methyltransferase|Frog virus 3 (isolate Goorha)

Query: 1 PHFVID 6
PH+V+D
Sbjct: 128 PHYVVD 133


>sp|IBMP_CERV|TRANSACTIVATOR/VIROPLASMIN protein|Carnation etched ring virus (CERV)

Query: 2 HFVIDKALT 10
HF+ D+A T
Sbjct: 255 HFLTDRAFT 263


>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P

Query: 1 PHFVIDKAL 9
PHF +D+ L
Sbjct: 137 PHFSVDRDL 145


>sp|YL152_MIMIV|UNCHARACTERIZED protein L152|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PHFVIDKALT 10
P+ +ID ALT
Sbjct: 273 PNLIIDIALT 282


>sp|MVP_RGDV|MOVEMENT protein|Rice gall dwarf virus (RGDV)

Query: 1 PHFVIDKALT 10
PHF +KAL+
Sbjct: 60 PHFRDEKALS 69


>sp|YR654_MIMIV|PUTATIVE fucosyltransferase R654|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 HFVIDKALT 10
+F+ID+A+T
Sbjct: 84 YFIIDEAVT 92




208|SequenceR|1045|1036|FIMWYPHFVI

>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain

Query: 1 FIMWYPHF 8
F+ W+PH+
Sbjct: 625 FVTWFPHY 632


>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)

Query: 1 FIMWYPHF 8
F+ WYP+F
Sbjct: 528 FVRWYPNF 535


>sp|VG57_BPMD2|GENE 57 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 3 MWYPHF 8
MW PHF
Sbjct: 86 MWKPHF 91


>sp|PTPH4_MDBVW|PROBABLE tyrosine phosphatase protein H4|Microplitis demolitor bracovirus

Query: 4 WYPHF 8
WYPH+
Sbjct: 97 WYPHW 101


>sp|Y146_HVAVE|PUTATIVE structural protein ORF146|Heliothis virescens ascovirus 3e

Query: 2 IMWYPHFV 9
++W+P FV
Sbjct: 38 MVWFPEFV 45


>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 4 WYPH 7
WYPH
Sbjct: 398 WYPH 401


>sp|YO23_BPHC1|PUTATIVE tail sheath protein|Haemophilus phage HP1 (strain HP1c1)

Query: 3 MWYPHF 8
MWYP +
Sbjct: 242 MWYPDY 247


>sp|VP2_AHSV4|OUTER capsid protein VP2|African horse sickness virus 4

Query: 1 FIMWYPHFVI 10
F M YPH+ +
Sbjct: 214 FGMMYPHYYV 223


>sp|PTASE_MBVLF|PUTATIVE serine protease|Mushroom bacilliform virus (isolate Australia/AUS

Query: 2 IMWYPHFVI 10
++WYP ++
Sbjct: 118 VLWYPRILV 126


>sp|PTPH3_MDBVW|TYROSINE phosphatase H3|Microplitis demolitor bracovirus (isolate Webb)

Query: 4 WYPHF 8
WYPH+
Sbjct: 205 WYPHW 209


>sp|NRDEB_BPSPB|RIBONUCLEOSIDE-DIPHOSPHATE reductase nrdEB subunit alpha|Bacillus phage SPbeta (Bacillus phage

Query: 1 FIMWYPHFV 9
+ M+YPH V
Sbjct: 297 YYMFYPHSV 305


>sp|CAPSD_TTVV8|CAPSID protein|Torque teno virus (isolate Chimpanzee/Japan/Pt-TTV6/2000)

Query: 4 WYPHF 8
WYP+F
Sbjct: 527 WYPYF 531


>sp|VG36_ALHV1|PUTATIVE tyrosine kinase 36|Alcelaphine herpesvirus 1 (strain C500)

Query: 3 MWYPHF 8
+WYP F
Sbjct: 145 IWYPRF 150


>sp|POLG_GBVB|GENOME polyprotein|Hepatitis GB virus B (GBV-B)

Query: 4 WYPHFVI 10
WY H+V+
Sbjct: 847 WYSHYVL 853


Query: 2 IMWYPHFV 9
I WYP+ +
Sbjct: 403 ISWYPYTI 410


>sp|LEF9_NPVAC|DNA-DIRECTED RNA polymerase subunit LEF-9|Autographa californica nuclear

Query: 1 FIMWYPHFVI 10
FI+W +FVI
Sbjct: 142 FILWDHNFVI 151


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 3 MWYPHFVI 10
MW PH I
Sbjct: 4387 MWKPHLTI 4394


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 3 MWYPHFVI 10
MW PH I
Sbjct: 4387 MWKPHLTI 4394


>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)

Query: 4 WYPHFV 9
WYPH +
Sbjct: 537 WYPHIL 542


>sp|LEF9_NPVOP|LATE expression factor 9|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 FIMWYPHFVI 10
FI+W +FV+
Sbjct: 115 FILWDYNFVV 124


>sp|PG085_YLDV|PROBABLE metalloendopeptidase G1-type|Yaba-like disease virus (YLDV)

Query: 1 FIMWYPHF 8
+I+ YPHF
Sbjct: 336 YIVVYPHF 343


>sp|RL12_HCMVM|UNCHARACTERIZED protein RL12|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 IMWYPHF 8
++WY H+
Sbjct: 218 VVWYRHY 224


>sp|POLG_PVCV2|GENOME polyprotein|Petunia vein clearing virus (isolate

Query: 4 WYPHF 8
W PHF
Sbjct: 1245 WIPHF 1249


>sp|POLG_PVCV1|GENOME polyprotein|Petunia vein clearing virus (isolate

Query: 4 WYPHF 8
W PHF
Sbjct: 1244 WIPHF 1248


>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 IMWYPHFV 9
+ WY H++
Sbjct: 177 VAWYRHYI 184


>sp|NSP1_ROTH6|NON-STRUCTURAL protein 1|Rotavirus A (strain

Query: 4 WYPHFVI 10
WY HF++
Sbjct: 133 WYNHFLM 139




209|SequenceR|1050|1041|AYVEGFIMWY

>sp|VE4_CRPVK|PROBABLE protein E4|Cottontail rabbit papillomavirus (strain Kansas)

Query: 3 VEGFIMW 9
+EGFIMW
Sbjct: 67 IEGFIMW 73


>sp|HEMA_I82A5|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/7/1982

Query: 1 AYVEGFIMW 9
A + GFIMW
Sbjct: 529 AVLLGFIMW 537


>sp|HEMA_I85A2|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/10/1985

Query: 5 GFIMW 9
GFIMW
Sbjct: 533 GFIMW 537


>sp|HEMA_I85A1|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/9/1985

Query: 5 GFIMW 9
GFIMW
Sbjct: 533 GFIMW 537


>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984

Query: 5 GFIMW 9
GFIMW
Sbjct: 549 GFIMW 553


>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong

Query: 5 GFIMW 9
GFIMW
Sbjct: 533 GFIMW 537


>sp|HEMA_I80A7|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/33/1980

Query: 5 GFIMW 9
GFIMW
Sbjct: 533 GFIMW 537


>sp|HEMA_I80A6|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/8/1980

Query: 5 GFIMW 9
GFIMW
Sbjct: 549 GFIMW 553


>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong

Query: 5 GFIMW 9
GFIMW
Sbjct: 533 GFIMW 537


>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978

Query: 5 GFIMW 9
GFIMW
Sbjct: 549 GFIMW 553


>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New

Query: 5 GFIMW 9
GFIMW
Sbjct: 549 GFIMW 553


>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977

Query: 5 GFIMW 9
GFIMW
Sbjct: 549 GFIMW 553


>sp|HEMA_I77A7|HEMAGGLUTININ A virus (strain A/Duck/Hong

Query: 5 GFIMW 9
GFIMW
Sbjct: 533 GFIMW 537


>sp|HEMA_I77A6|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/5/1977

Query: 5 GFIMW 9
GFIMW
Sbjct: 533 GFIMW 537


>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977

Query: 5 GFIMW 9
GFIMW
Sbjct: 549 GFIMW 553


>sp|HEMA_I76AD|HEMAGGLUTININ A virus (strain A/Duck/Hong

Query: 5 GFIMW 9
GFIMW
Sbjct: 533 GFIMW 537


>sp|HEMA_I76AC|HEMAGGLUTININ A virus (strain A/Goose/Hong

Query: 5 GFIMW 9
GFIMW
Sbjct: 533 GFIMW 537


>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976

Query: 5 GFIMW 9
GFIMW
Sbjct: 549 GFIMW 553


>sp|HEMA_I76A3|HEMAGGLUTININ A virus (strain A/Duck/Alberta/78/1976

Query: 5 GFIMW 9
GFIMW
Sbjct: 549 GFIMW 553


>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975

Query: 5 GFIMW 9
GFIMW
Sbjct: 550 GFIMW 554


>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong

Query: 5 GFIMW 9
GFIMW
Sbjct: 533 GFIMW 537


>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975

Query: 5 GFIMW 9
GFIMW
Sbjct: 549 GFIMW 553


>sp|HEMA_I74A2|HEMAGGLUTININ A virus (strain A/Duck/Memphis/928/1974

Query: 5 GFIMW 9
GFIMW
Sbjct: 549 GFIMW 553


>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972

Query: 5 GFIMW 9
GFIMW
Sbjct: 549 GFIMW 553


>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972

Query: 5 GFIMW 9
GFIMW
Sbjct: 549 GFIMW 553


>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971

Query: 5 GFIMW 9
GFIMW
Sbjct: 549 GFIMW 553


>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern

Query: 5 GFIMW 9
GFIMW
Sbjct: 549 GFIMW 553


>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong

Query: 5 GFIMW 9
GFIMW
Sbjct: 549 GFIMW 553


>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968

Query: 5 GFIMW 9
GFIMW
Sbjct: 549 GFIMW 553


>sp|HEMA_I63A3|HEMAGGLUTININ A virus (strain A/Duck/Ukraine/1/1963

Query: 5 GFIMW 9
GFIMW
Sbjct: 549 GFIMW 553


>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31

Query: 5 GFIMW 9
GFIMW
Sbjct: 549 GFIMW 553


>sp|HEMA_I82A6|HEMAGGLUTININ A virus (strain A/Duck/Hokkaido/21/1982

Query: 5 GFIMW 9
GFIMW
Sbjct: 533 GFIMW 537


>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980

Query: 5 GFIMW 9
GFIMW
Sbjct: 549 GFIMW 553


>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978

Query: 5 GFIMW 9
GFIMW
Sbjct: 549 GFIMW 553


>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port

Query: 5 GFIMW 9
GFIMW
Sbjct: 549 GFIMW 553


>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972

Query: 5 GFIMW 9
GFIMW
Sbjct: 549 GFIMW 553


>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986

Query: 5 GFIMW 9
GFIMW
Sbjct: 533 GFIMW 537


>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989

Query: 5 GFIMW 9
GFIMW
Sbjct: 549 GFIMW 553


>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong

Query: 5 GFIMW 9
GFIMW
Sbjct: 549 GFIMW 553


>sp|RPC1_BPPH8|REPRESSOR protein CI|Enterobacteria phage phi80 (Bacteriophage phi-80)

Query: 5 GFIMWY 10
GF+ WY
Sbjct: 224 GFVFWY 229


>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971

Query: 5 GFIMW 9
GFIMW
Sbjct: 548 GFIMW 552


>sp|HEMA_I72A0|HEMAGGLUTININ A virus (strain A/Equine/Algiers/1972

Query: 5 GFIMW 9
GFIMW
Sbjct: 548 GFIMW 552


>sp|HEMA_I63A4|HEMAGGLUTININ A virus (strain A/Equine/Uruguay/1/1963

Query: 5 GFIMW 9
GFIMW
Sbjct: 548 GFIMW 552


>sp|HEMA_I89A7|HEMAGGLUTININ A virus (strain A/Equine/Jillin/1/1989

Query: 5 GFIMW 9
GFIMW
Sbjct: 554 GFIMW 558


>sp|HEMA_I76A8|HEMAGGLUTININ A virus (strain A/Equine/Fontainebleau/1976

Query: 5 GFIMW 9
GFIMW
Sbjct: 548 GFIMW 552


>sp|HEMA_I63A2|HEMAGGLUTININ A virus (strain A/Equine/Miami/1/1963

Query: 5 GFIMW 9
GFIMW
Sbjct: 548 GFIMW 552


>sp|HEMA_I86A2|HEMAGGLUTININ A virus (strain A/Equine/Kentucky/2/1986

Query: 5 GFIMW 9
GFIMW
Sbjct: 548 GFIMW 552


>sp|HEMA_I85A5|HEMAGGLUTININ A virus (strain A/Equine/Santiago/1/1985

Query: 5 GFIMW 9
GFIMW
Sbjct: 548 GFIMW 552


>sp|HEMA_I87A3|HEMAGGLUTININ A virus (strain A/Equine/Kentucky/1/1987

Query: 5 GFIMW 9
GFIMW
Sbjct: 548 GFIMW 552


>sp|HEMA_I86A3|HEMAGGLUTININ A virus (strain A/Equine/Tennessee/5/1986

Query: 5 GFIMW 9
GFIMW
Sbjct: 548 GFIMW 552


>sp|HEMA_I89A8|HEMAGGLUTININ A virus (strain A/Equine/Suffolk/1989

Query: 5 GFIMW 9
GFIMW
Sbjct: 548 GFIMW 552


>sp|HEMA_I81A2|HEMAGGLUTININ A virus (strain A/Equine/Kentucky/1/1981)

Query: 5 GFIMW 9
GFIMW
Sbjct: 548 GFIMW 552


>sp|HEMA_I76AJ|HEMAGGLUTININ A virus (strain A/Equine/New

Query: 5 GFIMW 9
GFIMW
Sbjct: 548 GFIMW 552


>sp|HEMA_I80AB|HEMAGGLUTININ A virus (strain A/Equine/Romania/1980

Query: 5 GFIMW 9
GFIMW
Sbjct: 548 GFIMW 552


>sp|NS1A_TASV2|NON-STRUCTURAL polyprotein 1A|Turkey astrovirus 2 (TAstV-2)

Query: 2 YVEGFIMW 9
Y GF++W
Sbjct: 482 YTIGFVLW 489


>sp|NS1AB_TASV2|NON-STRUCTURAL polyprotein 1AB|Turkey astrovirus 2 (TAstV-2)

Query: 2 YVEGFIMW 9
Y GF++W
Sbjct: 482 YTIGFVLW 489


>sp|HEMA_I82A1|HEMAGGLUTININ A virus (strain A/Mallard/Astrakhan/263/1982

Query: 1 AYVEGFIMW 9
A + GF++W
Sbjct: 547 ALILGFVLW 555


>sp|HEMA_I82A0|HEMAGGLUTININ A virus (strain A/Mallard/Astrakhan/244/1982

Query: 1 AYVEGFIMW 9
A + GF++W
Sbjct: 542 ALILGFVLW 550


>sp|Y1070_SIRV1|UNCHARACTERIZED protein 1070|Sulfolobus islandicus rod-shaped virus 1

Query: 3 VEGFIMWY 10
++GF+ W+
Sbjct: 95 IQGFVSWF 102


>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)

Query: 4 EGFIMWY 10
+GF +WY
Sbjct: 311 DGFSVWY 317


>sp|YL764_MIMIV|PUTATIVE ankyrin repeat protein L764|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 YVEGFIMW 9
Y++G ++W
Sbjct: 94 YIDGLLVW 101




210|SequenceR|1055|1046|VDIEYAYVEG

>sp|VG72_ICHVA|UNCHARACTERIZED protein ORF72|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 DIEYAYVEG 10
D+E+AY++G
Sbjct: 123 DVEFAYIDG 131


>sp|FIBC_BPT5|STRAIGHT fiber protein pb4|Escherichia phage T5 (Enterobacteria phage

Query: 1 VDIEYAYVEG 10
+++ YAY++G
Sbjct: 333 IEVNYAYIKG 342


>sp|TRM1_EHV1V|TRIPARTITE terminase subunit 1|Equine herpesvirus 1 (strain V592)

Query: 3 IEYAYVEG 10
+EYA VEG
Sbjct: 79 LEYAEVEG 86


>sp|TRM1_EHV1B|TRIPARTITE terminase subunit 1|Equine herpesvirus 1 (strain Ab4p)

Query: 3 IEYAYVEG 10
+EYA VEG
Sbjct: 79 LEYAEVEG 86


>sp|TRM1_EHV1|TRIPARTITE terminase subunit 1|Equine herpesvirus 1 (strain HVS25A)

Query: 3 IEYAYVEG 10
+EYA VEG
Sbjct: 79 LEYAEVEG 86


>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4 EYAYVEG 10
+YAYV+G
Sbjct: 37 KYAYVQG 43


>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4 EYAYVEG 10
+YAYV+G
Sbjct: 37 KYAYVQG 43


>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4 EYAYVEG 10
+YAYV+G
Sbjct: 37 KYAYVQG 43


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2 DIEYAYV 8
DIEY Y+
Sbjct: 6201 DIEYPYI 6207




211|SequenceR|1060|1051|SDNACVDIEY

>sp|VG60_ICHVA|UNCHARACTERIZED protein ORF60|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 SDNACVDIE 9
+DN CV IE
Sbjct: 215 TDNTCVLIE 223


>sp|VAPL_BP186|PROTEIN apl|Escherichia phage 186 (Bacteriophage 186)

Query: 2 DNACVDIE 9
DN CV IE
Sbjct: 38 DNPCVPIE 45


>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69

Query: 2 DNACVD 7
DN CVD
Sbjct: 143 DNVCVD 148


>sp|VP4_ROTB5|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 2 DNACVDIEY 10
+N+CV I+Y
Sbjct: 347 ENSCVYIDY 355




212|SequenceR|1065|1056|IQPIVSDNAC

>sp|PORTL_BPMU|PORTAL protein|Escherichia phage Mu (Bacteriophage Mu)

Query: 1 IQPIVSDNA 9
IQP+V DN
Sbjct: 414 IQPVVPDNG 422


>sp|TRM3_ALHV1|TRIPARTITE terminase subunit 3|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 QPIVSDNAC 10
QP++SD C
Sbjct: 93 QPVLSDQLC 101


>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 4 IVSDNAC 10
IVSDN C
Sbjct: 2978 IVSDNEC 2984


>sp|YL533_MIMIV|UNCHARACTERIZED protein L533|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 IVSDNAC 10
IVSDN C
Sbjct: 265 IVSDNRC 271


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 4 IVSDNAC 10
IVSDN C
Sbjct: 2978 IVSDNEC 2984


>sp|L_NDVB1|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Chicken/United

Query: 2 QPIVSDNAC 10
P+VS N C
Sbjct: 1104 HPLVSSNMC 1112


>sp|L_NDVB|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Beaudette

Query: 2 QPIVSDNAC 10
P+VS N C
Sbjct: 1104 HPLVSSNMC 1112


>sp|VG52_SHV21|UNCHARACTERIZED gene 52 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 IQPIVSDNAC 10
+ P+VS N C
Sbjct: 74 VLPLVSKNQC 83




213|SequenceR|1070|1061|TGPGCIQPIV

>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 2 GPGCIQPIV 10
PGC PIV
Sbjct: 4601 APGCGVPIV 4609


>sp|POLG_BVY3|GENOME polyprotein|Blackberry virus Y (isolate Blackberry

Query: 1 TGPGCIQPIV 10
T P CI+ IV
Sbjct: 130 TAPQCIEDIV 139


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 GPGCIQPIV 10
PGC PIV
Sbjct: 4595 APGCGVPIV 4603


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 2 GPGCIQPIV 10
PGC PIV
Sbjct: 4593 APGCGVPIV 4601


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 2 GPGCIQPIV 10
PGC PIV
Sbjct: 4589 APGCGVPIV 4597


>sp|CAPSD_OASV1|CAPSID polyprotein VP86|Ovine astrovirus 1 (OAstV-1)

Query: 1 TGPGCIQP 8
TGPG QP
Sbjct: 400 TGPGASQP 407


>sp|VG04_BPMD2|GENE 4 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 2 GPGCIQ 7
GPGC++
Sbjct: 36 GPGCVR 41


>sp|Y122_OSHVF|UNCHARACTERIZED protein ORF122|Ostreid herpesvirus 1 (isolate France)

Query: 2 GPGCIQP 8
G GC++P
Sbjct: 260 GEGCVKP 266


>sp|VG75_EHV2|PROBABLE membrane antigen 75|Equine herpesvirus 2 (strain 86/87)

Query: 3 PGCIQPI 9
PGC +P+
Sbjct: 1067 PGCTEPL 1073


>sp|VG04_BPML5|GENE 4 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 2 GPGCIQ 7
GPGC++
Sbjct: 36 GPGCVR 41




214|SequenceR|1075|1066|FPTLWTGPGC

>sp|SPIKE_ADECT|FIBER protein|Canine adenovirus serotype 2 (strain

Query: 3 TLWTGPG 9
TLWTGPG
Sbjct: 364 TLWTGPG 370


>sp|SPIKE_ADE03|FIBER protein|Human adenovirus B serotype 3

Query: 3 TLWTGP 8
TLWTGP
Sbjct: 132 TLWTGP 137


>sp|RDRP_AQRVC|RNA-DIRECTED RNA polymerase VP2|Aquareovirus C (isolate Golden

Query: 2 PTLWTGP 8
P+ WTGP
Sbjct: 407 PSAWTGP 413


>sp|YR311_MIMIV|PUTATIVE RING finger protein R311|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 FPTLWT 6
FP LWT
Sbjct: 212 FPKLWT 217


>sp|ABL_FSVHY|TYROSINE-PROTEIN kinase transforming protein Abl|Feline sarcoma virus (strain

Query: 1 FPTLWTGP 8
FP WT P
Sbjct: 350 FPIKWTAP 357


>sp|SPIKE_ADEB3|FIBER protein|Bovine adenovirus B serotype 3

Query: 3 TLWTGPG 9
TLWTG G
Sbjct: 802 TLWTGTG 808


>sp|FGR_FSVGR|TYROSINE-PROTEIN kinase transforming protein Fgr|Feline sarcoma virus (strain

Query: 1 FPTLWTGP 8
FP WT P
Sbjct: 443 FPIKWTAP 450


>sp|POL_SIVGB|GAG-POL polyprotein|Simian immunodeficiency virus (isolate GB1)

Query: 4 LWTGPG 9
LW GPG
Sbjct: 1390 LWKGPG 1395


>sp|ABL_MLVAB|TYROSINE-PROTEIN kinase transforming protein Abl|Abelson murine leukemia virus

Query: 1 FPTLWTGP 8
FP WT P
Sbjct: 287 FPIKWTAP 294


>sp|DEPOL_BPK51|DEPOLYMERASE, capsule KL64-specific|Klebsiella phage P510 (Bacteriophage P510)

Query: 2 PTLWTGPG 9
P LW+G G
Sbjct: 919 PLLWSGAG 926


>sp|SRC_RSVPA|TYROSINE-PROTEIN kinase transforming protein Src|Rous sarcoma virus (strain PA101T)

Query: 1 FPTLWTGP 8
FP WT P
Sbjct: 421 FPVKWTAP 428


>sp|AC124_NPVAC|PROTEIN AC124|Autographa californica nuclear polyhedrosis virus

Query: 2 PTLWT 6
PTLWT
Sbjct: 73 PTLWT 77


>sp|H962R_ASFK5|PUTATIVE primase C962R|African swine fever virus (isolate

Query: 4 LWTGPGC 10
LW G GC
Sbjct: 633 LWLGGGC 639


>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 LWTGPG 9
LW GPG
Sbjct: 1403 LWQGPG 1408


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 LWTGPG 9
LW GPG
Sbjct: 1404 LWKGPG 1409


>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 LWTGPG 9
LW GPG
Sbjct: 1405 LWKGPG 1410


>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 LWTGPG 9
LW GPG
Sbjct: 1405 LWKGPG 1410


>sp|HELI_EHV2|DNA replication helicase|Equine herpesvirus 2 (strain 86/87)

Query: 2 PTLWT 6
PTLWT
Sbjct: 181 PTLWT 185


>sp|POL_SIVM1|GAG-POL polyprotein|Simian immunodeficiency virus (isolate Mm142-83)

Query: 4 LWTGPG 9
LW GPG
Sbjct: 1389 LWKGPG 1394


>sp|H962R_ASFWA|PUTATIVE primase C962R|African swine fever virus (isolate

Query: 4 LWTGPGC 10
LW G GC
Sbjct: 633 LWLGGGC 639


>sp|H962R_ASFM2|PUTATIVE primase C962R|African swine fever virus (isolate

Query: 4 LWTGPGC 10
LW G GC
Sbjct: 633 LWLGGGC 639


>sp|POL_SIVSP|GAG-POL polyprotein|Simian immunodeficiency virus (isolate PBj14/BCL-3)

Query: 4 LWTGPG 9
LW GPG
Sbjct: 1390 LWKGPG 1395


>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 LWTGPG 9
LW GPG
Sbjct: 1402 LWKGPG 1407


>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 TLWTGPG 9
TLWTGP
Sbjct: 152 TLWTGPN 158


>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 TLWTGPG 9
TLWTGP
Sbjct: 152 TLWTGPN 158


>sp|POL_SIVM2|GAG-POL polyprotein|Simian immunodeficiency virus (isolate Mm251)

Query: 4 LWTGPG 9
LW GPG
Sbjct: 1389 LWKGPG 1394


>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 LWTGPG 9
LW GPG
Sbjct: 1403 LWKGPG 1408


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 LWTGPG 9
LW GPG
Sbjct: 1403 LWKGPG 1408


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 LWTGPG 9
LW GPG
Sbjct: 1403 LWKGPG 1408


>sp|H962R_ASFP4|PUTATIVE primase C962R|African swine fever virus (isolate

Query: 4 LWTGPGC 10
LW G GC
Sbjct: 633 LWLGGGC 639


>sp|H962R_ASFB7|PUTATIVE primase C962R|African swine fever virus (strain

Query: 4 LWTGPGC 10
LW G GC
Sbjct: 633 LWLGGGC 639


>sp|SPIKE_ADECG|FIBER protein|Canine adenovirus serotype 1 (strain

Query: 3 TLWTGP 8
TLWTGP
Sbjct: 365 TLWTGP 370


>sp|SPIKE_ADECC|FIBER protein|Canine adenovirus serotype 1 (strain

Query: 3 TLWTGP 8
TLWTGP
Sbjct: 365 TLWTGP 370


>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 LWTGPG 9
LW GPG
Sbjct: 1404 LWKGPG 1409


>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 LWTGPG 9
LW GPG
Sbjct: 1402 LWKGPG 1407


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 LWTGPG 9
LW GPG
Sbjct: 1404 LWKGPG 1409


>sp|POL_SIVS4|GAG-POL polyprotein|Simian immunodeficiency virus (isolate F236/smH4)

Query: 4 LWTGPG 9
LW GPG
Sbjct: 1390 LWKGPG 1395


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 LWTGPG 9
LW GPG
Sbjct: 1404 LWKGPG 1409


>sp|SPIKE_ADECR|FIBER protein|Canine adenovirus serotype 1 (strain

Query: 3 TLWTGP 8
TLWTGP
Sbjct: 365 TLWTGP 370


>sp|YES_AVISY|TYROSINE-PROTEIN kinase transforming protein Yes|Y73 avian sarcoma virus (Y73SV)

Query: 1 FPTLWTGP 8
FP WT P
Sbjct: 424 FPIKWTAP 431


>sp|LTP_PSHV1|LARGE tegument protein deneddylase|Psittacid herpesvirus 1 (isolate

Query: 1 FPTLWTGPG 9
P LW G G
Sbjct: 90 LPRLWRGSG 98


>sp|SRC_AVISS|TYROSINE-PROTEIN kinase transforming protein Src|Avian sarcoma virus (strain S1)

Query: 1 FPTLWTGP 8
FP WT P
Sbjct: 424 FPIKWTAP 431


>sp|LYS_BPMV1|LYSOZYME phage mv1 (Lactococcus delbrueckii

Query: 2 PTLWTGPG 9
P+ WT PG
Sbjct: 44 PSRWTAPG 51


>sp|SRC_RSVSE|TYROSINE-PROTEIN kinase transforming protein Src|Rous sarcoma virus subgroup E

Query: 1 FPTLWTGP 8
FP WT P
Sbjct: 424 FPIKWTAP 431


>sp|SRC_AVIST|TYROSINE-PROTEIN kinase transforming protein Src|Avian sarcoma virus (strain S2)

Query: 1 FPTLWTGP 8
FP WT P
Sbjct: 424 FPIKWTAP 431


>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 2 PTLWTG 7
PTLWT
Sbjct: 1590 PTLWTA 1595


>sp|SRC_RSVP|TYROSINE-PROTEIN kinase transforming protein Src|Rous sarcoma virus subgroup C

Query: 1 FPTLWTGP 8
FP WT P
Sbjct: 424 FPIKWTAP 431


>sp|SRC_RSVH1|TYROSINE-PROTEIN kinase transforming protein Src|Rous sarcoma virus (strain H-19)

Query: 1 FPTLWTGP 8
FP WT P
Sbjct: 424 FPIKWTAP 431


>sp|R1A_WBV24|REPLICASE polyprotein 1a|White bream virus (isolate Blicca

Query: 2 PTLWTG 7
PTLWT
Sbjct: 1590 PTLWTA 1595


>sp|Y167_ABVP|UNCHARACTERIZED protein ORF167|Acidianus bottle-shaped virus (isolate

Query: 1 FPTLWTG 7
FP+ WTG
Sbjct: 15 FPSNWTG 21


>sp|GLNA_MIMIV|PUTATIVE glutamine synthetase|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 WTGPGC 10
W G GC
Sbjct: 241 WNGSGC 246


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 3 TLWTGPG 9
T+W PG
Sbjct: 3298 TIWVNPG 3304


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3 TLWTGPG 9
T+W PG
Sbjct: 3298 TIWVNPG 3304


>sp|VG85_GAHVM|UNCHARACTERIZED gene 85 protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 4 LWTGPG 9
LW+GPG
Sbjct: 116 LWSGPG 121




215|SequenceR|1080|1071|YVAQLFPTLW

>sp|L_IPPYV|RNA-DIRECTED RNA polymerase L|Ippy mammarenavirus (isolate Rat/Central African

Query: 1 YVAQLFPTL 9
YV +LFPTL
Sbjct: 359 YVRELFPTL 367


>sp|POL_WMSV|GAG-POL polyprotein|Woolly monkey sarcoma virus (WMSV)

Query: 4 QLFPTLW 10
QLFPT+W
Sbjct: 666 QLFPTVW 672


>sp|POL_GALV|GAG-POL polyprotein|Gibbon ape leukemia virus (GALV)

Query: 4 QLFPTLW 10
QLFPT+W
Sbjct: 665 QLFPTVW 671


>sp|NCAP_MSTV|NUCLEOPROTEIN stripe virus (MStV)

Query: 2 VAQLFPTL 9
VAQLFP +
Sbjct: 123 VAQLFPNV 130


>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain

Query: 5 LFPTLW 10
LFPT W
Sbjct: 787 LFPTAW 792


>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka

Query: 5 LFPTLW 10
LFPT W
Sbjct: 787 LFPTAW 792


>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United

Query: 3 AQLFPTLW 10
AQL PT W
Sbjct: 43 AQLPPTTW 50


>sp|VP4_ROTBS|OUTER capsid protein VP4|Rotavirus C (isolate

Query: 3 AQLFPTLW 10
AQL PT W
Sbjct: 43 AQLPPTTW 50


>sp|VU55_HHV6U|UNCHARACTERIZED protein U55|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 YVAQLFPTLW 10
+V +L+P LW
Sbjct: 313 HVFKLYPFLW 322


>sp|VU55_HHV6Z|UNCHARACTERIZED protein U55|Human herpesvirus 6B (strain Z29)

Query: 1 YVAQLFPTLW 10
+V +L+P LW
Sbjct: 373 HVFKLYPFLW 382


>sp|POL_KORV|GAG-POL polyprotein|Koala retrovirus (KoRV)

Query: 4 QLFPTLW 10
QLFP +W
Sbjct: 666 QLFPMVW 672




216|SequenceR|1085|1076|YQVFLYVAQL

***** No hits found ******


217|SequenceR|1090|1081|NVMIIYQVFL

>sp|POLG_PSBMV|GENOME polyprotein|Pea seed-borne mosaic virus (strain

Query: 2 VMIIYQVFL 10
V+++YQ+F+
Sbjct: 1937 VVLMYQIFM 1945




218|SequenceR|1095|1086|FAILLNVMII

***** No hits found ******


219|SequenceR|1100|1091|YVNNFFAILL

>sp|POLG_PSBMV|GENOME polyprotein|Pea seed-borne mosaic virus (strain

Query: 1 YVNNFFAILL 10
Y+N FFA+L+
Sbjct: 743 YINIFFAMLV 752


>sp|MVP_PSBMV|P3N-PIPO polyprotein|Pea seed-borne mosaic virus (strain

Query: 1 YVNNFFAILL 10
Y+N FFA+L+
Sbjct: 743 YINIFFAMLV 752


>sp|MCP_EHV1V|MAJOR capsid protein|Equine herpesvirus 1 (strain V592)

Query: 1 YVNNFFAIL 9
+VNNF+ I+
Sbjct: 663 FVNNFYMIM 671


>sp|MCP_EHV1B|MAJOR capsid protein|Equine herpesvirus 1 (strain Ab4p)

Query: 1 YVNNFFAIL 9
+VNNF+ I+
Sbjct: 663 FVNNFYMIM 671


>sp|POLG_TEV|GENOME polyprotein|Tobacco etch virus (TEV)

Query: 1 YVNNFFAILL 10
Y+N FFA+L+
Sbjct: 650 YMNIFFALLV 659


>sp|MVP_TEV|P3N-PIPO polyprotein|Tobacco etch virus (TEV)

Query: 1 YVNNFFAILL 10
Y+N FFA+L+
Sbjct: 650 YMNIFFALLV 659


>sp|MCP_SUHVS|MAJOR capsid protein|Suid herpesvirus 1 (strain Indiana

Query: 1 YVNNFFAIL 9
+VNNF+ ++
Sbjct: 639 FVNNFYMVM 647


>sp|GL_HHV6U|ENVELOPE glycoprotein L|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 YVNNFF 6
YVNNFF
Sbjct: 151 YVNNFF 156


>sp|GL_HHV6Z|ENVELOPE glycoprotein L|Human herpesvirus 6B (strain Z29)

Query: 1 YVNNFF 6
YVNNFF
Sbjct: 151 YVNNFF 156




220|SequenceR|1105|1096|AKVQLYVNNF

>sp|GAG_FFV|GAG polyprotein|Feline foamy virus (FFV) (Feline

Query: 4 QLYVNN 9
QLY+NN
Sbjct: 12 QLYINN 17


>sp|MVP_RGDV|MOVEMENT protein|Rice gall dwarf virus (RGDV)

Query: 2 KVQLYVNNF 10
KVQL +N F
Sbjct: 379 KVQLMINKF 387


>sp|ORF2_GVAIS|UNCHARACTERIZED ORF2 protein|Grapevine virus A (isolate Is

Query: 3 VQLYVNN 9
V LYVNN
Sbjct: 137 VDLYVNN 143


>sp|P7_PBCV1|MINOR capsid protein P7|Paramecium bursaria Chlorella virus 1

Query: 1 AKVQLYVNNF 10
A LY+NN+
Sbjct: 27 ASTWLYINNY 36




221|SequenceR|1110|1101|VINSIAKVQL

>sp|GH_ELHVK|ENVELOPE glycoprotein H|Elephantid herpesvirus 1 (isolate Asian

Query: 1 VINSIAKVQ 9
VINSIA +Q
Sbjct: 654 VINSIADIQ 662




222|SequenceR|1115|1106|RQYKWVINSI

>sp|DPOL_PBCVN|DNA polymerase|Paramecium bursaria Chlorella virus NY2A

Query: 1 RQYKWVINSI 10
R YK V+NS+
Sbjct: 582 RSYKIVMNSV 591


>sp|MVP_ZYMVC|P3N-PIPO polyprotein|Zucchini yellow mosaic virus (strain

Query: 2 QYKWVINSI 10
Q+KW++ +I
Sbjct: 237 QFKWLLKAI 245


>sp|POLG_ZYMVC|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 2 QYKWVINSI 10
Q+KW++ +I
Sbjct: 237 QFKWLLKAI 245


>sp|MU2_REOVD|MICROTUBULE-ASSOCIATED protein mu-2|Reovirus type 3 (strain Dearing)

Query: 4 KWVINS 9
KWV+NS
Sbjct: 478 KWVLNS 483


>sp|MU2_REOVL|MICROTUBULE-ASSOCIATED protein mu-2|Reovirus type 1 (strain Lang)

Query: 4 KWVINS 9
KWV+NS
Sbjct: 478 KWVLNS 483


>sp|422L_IIV6|UNCHARACTERIZED protein 422L|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 QYKWVINS 9
+Y W++N+
Sbjct: 102 KYSWILNT 109


>sp|Y084_SFAVA|PUTATIVE structural protein ORF84|Spodoptera frugiperda ascovirus 1a

Query: 2 QYKWVINSI 10
QY W +N +
Sbjct: 962 QYAWYLNKL 970




223|SequenceR|1120|1111|MIFHYRQYKW

>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)

Query: 1 MIFHYRQYKW 10
+ F++ QY+W
Sbjct: 749 LAFYFSQYRW 758


>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)

Query: 1 MIFHYRQYKW 10
+ F++ QY+W
Sbjct: 746 LAFYFSQYRW 755


>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 3 FHYRQYKW 10
HY++YK+
Sbjct: 1212 LHYKRYKY 1219


>sp|RIR2_OSHVF|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Ostreid herpesvirus 1 (isolate France)

Query: 2 IFHYRQ 7
I+HYRQ
Sbjct: 561 IYHYRQ 566


>sp|DNB2_ADES1|DNA-BINDING protein|Snake adenovirus serotype 1 (SnAdV-1)

Query: 1 MIFHYRQYKW 10
M H+ ++KW
Sbjct: 317 MPIHFPRFKW 326


>sp|YR328_MIMIV|UNCHARACTERIZED protein R328|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 IFHYRQYKW 10
I HY +YK+
Sbjct: 296 INHYEKYKY 304


>sp|MVP_ZYMVC|P3N-PIPO polyprotein|Zucchini yellow mosaic virus (strain

Query: 5 YRQYKW 10
Y Q+KW
Sbjct: 235 YEQFKW 240


>sp|POLG_ZYMVC|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 5 YRQYKW 10
Y Q+KW
Sbjct: 235 YEQFKW 240


>sp|FIBER_BPK1F|TAIL spike protein|Escherichia phage K1F (Bacteriophage K1F)

Query: 4 HYRQYKW 10
HY Y+W
Sbjct: 934 HYIMYQW 940




224|SequenceR|1125|1116|KEHYAMIFHY

>sp|POL1_GCMV|RNA1 polyprotein|Grapevine chrome mosaic virus (GCMV)

Query: 1 KEHYAMIFHY 10
KE AMI HY
Sbjct: 636 KEFAAMIMHY 645


>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain

Query: 1 KEHYAMIFH 9
KE Y M FH
Sbjct: 119 KEDYIMYFH 127


>sp|RDRP_GLVWB|PROBABLE RNA-directed RNA polymerase|Giardia lamblia virus (isolate Wang)

Query: 2 EHYAMIFHY 10
+HY+ IF Y
Sbjct: 1704 KHYSNIFRY 1712


>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain

Query: 1 KEHYAMIFH 9
KE Y M FH
Sbjct: 119 KEDYIMYFH 127


>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P

Query: 1 KEHYAMIFHY 10
K+ YA+++H+
Sbjct: 675 KDLYALLYHH 684


>sp|UB222_WSSVS|RING finger containing E3 ubiquitin-protein|White spot syndrome virus

Query: 2 EHYAMIFH 9
EH+ +IFH
Sbjct: 86 EHFPVIFH 93


>sp|ETFS_ASFM2|EARLY transcription factor large subunit|African swine fever virus

Query: 3 HYAMIFHY 10
HY FHY
Sbjct: 887 HYPASFHY 894


>sp|VF113_ASFP4|EARLY transcription factor large subunit|African swine fever virus

Query: 3 HYAMIFHY 10
HY FHY
Sbjct: 922 HYPASFHY 929


>sp|ETFS_ASFB7|EARLY transcription factor large subunit|African swine fever virus

Query: 3 HYAMIFHY 10
HY FHY
Sbjct: 922 HYPASFHY 929


>sp|ETFS_ASFK5|EARLY transcription factor large subunit|African swine fever virus

Query: 3 HYAMIFHY 10
HY FHY
Sbjct: 923 HYPASFHY 930


>sp|ETFS_ASFWA|EARLY transcription factor large subunit|African swine fever virus

Query: 3 HYAMIFHY 10
HY FHY
Sbjct: 922 HYPASFHY 929




225|SequenceR|1130|1121|PPLVPKEHYA

>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 1 PPLVPKEHY 9
P LVP+EHY
Sbjct: 5545 PTLVPQEHY 5553


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 PPLVPKEHY 9
P LVP+EHY
Sbjct: 5539 PTLVPQEHY 5547


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 PPLVPKEHY 9
P LVP+EHY
Sbjct: 5562 PTLVPQEHY 5570


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 1 PPLVPKEHY 9
P LVP+EHY
Sbjct: 5537 PTLVPQEHY 5545


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 1 PPLVPKEHY 9
P LVP+EHY
Sbjct: 5533 PTLVPQEHY 5541


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1 PPLVPKEHYA 10
P LVP+E+YA
Sbjct: 5573 PTLVPQENYA 5582


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1 PPLVPKEHYA 10
P LVP+E+YA
Sbjct: 5593 PTLVPQENYA 5602


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1 PPLVPKEHYA 10
P LVP+E+YA
Sbjct: 5623 PTLVPQENYA 5632


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 PPLVPKEHYA 10
P LVP+E+Y+
Sbjct: 5535 PTLVPQENYS 5544


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 PPLVPKEHYA 10
P LVP+E+Y+
Sbjct: 5535 PTLVPQENYS 5544


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 PPLVPKEHYA 10
P LVP+E+Y+
Sbjct: 5535 PTLVPQENYS 5544


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 PPLVPKEHYA 10
P LVP+E+Y+
Sbjct: 5535 PTLVPQENYS 5544


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 PPLVPKEHYA 10
P LVP+E+Y+
Sbjct: 5535 PTLVPQENYS 5544


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 1 PPLVPKEHY 9
P LVP+E+Y
Sbjct: 5626 PTLVPQENY 5634


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 PPLVPKEHY 9
P LVP+E+Y
Sbjct: 5620 PTLVPQENY 5628


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 1 PPLVPKEHY 9
P LVP+E+Y
Sbjct: 5568 PTLVPQENY 5576


>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PPLVPKE 7
PP+VPKE
Sbjct: 1180 PPVVPKE 1186


>sp|NS1_I89A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Beijing/352/1989

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I83A8|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I83A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chile/1/1983

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I80AA|NON-STRUCTURAL protein 1|Influenza A virus (strain A/India/6263/1980

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I80A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/4/1980

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I78A8|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/18/1978

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I78A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/2/1978

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I77AB|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USSR/90/1977

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I77AA|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Brazil/11/1978

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I77A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Colorado/1/1977

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I77A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Alaska/6/1977

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I76A6|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/110/1976

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I75A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Beijing/39/1975

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I73A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Port

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I72A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/101/1972

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I72A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/102/1972

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I72A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Udorn/307/1972

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I71A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/1/1971

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I70A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Qu/7/1970

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I68A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Korea/426/1968

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I68A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I68A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Aichi/2/1968

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I57A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Japan/305/1957

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I54A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Malaysia:Malaya/302/1954

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I54A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/1/1954

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I51A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Albany/12/1951

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I50A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Fort

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I45A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I40A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hickox/1940

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I36A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Henry/1936

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I35A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Phila/1935

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I34A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Puerto

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I06A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Russia:St.Petersburg/8/2006

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I000W|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Wa-182)

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 1 PPLVPKEH 8
PP +PK H
Sbjct: 682 PPEIPKPH 689


>sp|NS1_I000X|NON-STRUCTURAL protein 1|Influenza A virus (strain A/X-31

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|DPOL_BPMD2|DNA polymerase|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 2 PLVPKEH 8
PLVP EH
Sbjct: 217 PLVPYEH 223


>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 1 PPLVPKEH 8
PP +PK H
Sbjct: 682 PPEIPKPH 689


>sp|NS1_I33A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Wilson-Smith/1933

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|CAPSD_SFAVA|MAJOR capsid protein|Spodoptera frugiperda ascovirus 1a (SfAV-1a)

Query: 2 PLVPKEHY 9
PL+P EH+
Sbjct: 361 PLLPSEHF 368


>sp|NS1_I57A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/47/1957

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I57A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/17/1957

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I57A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/1957

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 212 PPLTPKQ 218


>sp|NS1_I43A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Iowa/1943

Query: 1 PPLVPKE 7
PPL PK+
Sbjct: 206 PPLTPKQ 212


>sp|X_HBVB3|PROTEIN X|Hepatitis B virus genotype B2

Query: 1 PPLVPKEHYA 10
PP+VP +H A
Sbjct: 42 PPIVPSDHGA 51


>sp|NS1_I76AM|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mynah/Haneda-Thai/1976

Query: 1 PPLVPKEHY 9
PPL PK+ +
Sbjct: 209 PPLPPKQKW 217


>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 1 PPLVPK 6
PPL+PK
Sbjct: 677 PPLLPK 682


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 PPLVPKEHY 9
P L+P+E Y
Sbjct: 5403 PTLLPQERY 5411


>sp|CAPSD_HVAVE|MAJOR capsid protein|Heliothis virescens ascovirus 3e (HvAV-3e)

Query: 2 PLVPKEHY 9
P++P EH+
Sbjct: 356 PMLPAEHF 363


>sp|CAPSD_BPPHK|CAPSID protein F|Enterobacteria phage phiK (Bacteriophage phi-K)

Query: 1 PPLVPKEHY 9
PP+ P EH+
Sbjct: 293 PPISPLEHH 301


>sp|CAPSD_BPAL3|CAPSID protein F|Escherichia phage alpha3 (Bacteriophage alpha-3)

Query: 1 PPLVPKEHY 9
PP+ P EH+
Sbjct: 293 PPISPLEHH 301


>sp|POL1_CRLVP|RNA1 polyprotein|Cherry rasp leaf virus (isolate

Query: 2 PLVPKEHYA 10
PL P+E Y+
Sbjct: 1041 PLTPQEFYS 1049


>sp|POLS_DXV96|STRUCTURAL polyprotein|Drosophila x virus (isolate Chung/1996)

Query: 1 PPLVPKEHY 9
PP V + HY
Sbjct: 923 PPRVQRRHY 931


>sp|YR525_MIMIV|UNCHARACTERIZED protein R525|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 PLVPKE 7
PL+PKE
Sbjct: 392 PLIPKE 397


>sp|YL404_MIMIV|PUTATIVE alpha/beta hydrolase L404|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PPLVPKEHY 9
PP +P+ +Y
Sbjct: 25 PPYIPRFYY 33


>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)

Query: 1 PPLVPKEHYA 10
PP++P+ +Y
Sbjct: 205 PPVIPEYYYG 214




226|SequenceR|1135|1126|LIILPPPLVP

>sp|MCP_SHV21|MAJOR capsid protein|Saimiriine herpesvirus 2 (strain 11)

Query: 4 LPPPLVP 10
LPPPL P
Sbjct: 561 LPPPLAP 567


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 5 PPPLVP 10
PPP+VP
Sbjct: 1190 PPPIVP 1195


>sp|SIGM2_REOVJ|INNER capsid protein sigma-2|Reovirus type 2 (strain D5/Jones)

Query: 1 LIILPPPLV 9
L+I PPP++
Sbjct: 104 LVIAPPPIL 112


>sp|R1A_BCHK9|REPLICASE polyprotein 1a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 5 PPPLVP 10
PPP+VP
Sbjct: 1190 PPPIVP 1195


>sp|AC34_NPVAC|PROTEIN Ac34|Autographa californica nuclear polyhedrosis virus

Query: 4 LPPPLV 9
LPPPLV
Sbjct: 10 LPPPLV 15


>sp|Y057_OSHVF|PUTATIVE transmembrane protein ORF57|Ostreid herpesvirus 1 (isolate France)

Query: 2 IILPPPLVP 10
++ PPP+VP
Sbjct: 275 LVEPPPMVP 283


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 1 LIILPPPLVP 10
++ PPLVP
Sbjct: 3108 FVVCLPPLVP 3117


>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 1 LIILPPPLVP 10
++ PPLVP
Sbjct: 3108 FVVCLPPLVP 3117


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 1 LIILPPPLVP 10
++ PPLVP
Sbjct: 2988 FVVCLPPLVP 2997


>sp|HEPA_EHV1V|DNA helicase/primase complex-associated protein|Equine herpesvirus 1

Query: 3 ILPPPLV 9
+ PPPLV
Sbjct: 661 LFPPPLV 667


>sp|HEPA_EHV1B|DNA helicase/primase complex-associated protein|Equine herpesvirus 1

Query: 3 ILPPPLV 9
+ PPPLV
Sbjct: 661 LFPPPLV 667


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 1 LIILPPPLVP 10
++ PPLVP
Sbjct: 2988 FVVCLPPLVP 2997


>sp|CAPSD_MUMIP|CAPSID protein VP1|Murine minute virus (strain MVM

Query: 2 IILPPPL 8
+++PPPL
Sbjct: 561 LVVPPPL 567


>sp|CAPSD_MUMIM|CAPSID protein VP1|Murine minute virus (strain MVMi)

Query: 2 IILPPPL 8
+++PPPL
Sbjct: 561 LVVPPPL 567


>sp|VF213_IIV6|TRANSMEMBRANE protein 213R|Invertebrate iridescent virus 6 (IIV-6)

Query: 3 ILPPPLVP 10
++PPP+ P
Sbjct: 165 LMPPPIAP 172


>sp|G1P_BPPF1|PUTATIVE Gene 1 protein|Pseudomonas phage Pf1 (Bacteriophage Pf1)

Query: 4 LPPPLVP 10
LPP LVP
Sbjct: 289 LPPGLVP 295




227|SequenceR|1140|1131|SVIHSLIILP

>sp|SPIKE_BCHK5|SPIKE glycoprotein|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 4 HSLIILP 10
H+L+ILP
Sbjct: 175 HTLVILP 181




228|SequenceR|1145|1136|ICCFLSVIHS

>sp|V022_FOWPN|PUTATIVE ankyrin repeat protein FPV022|Fowlpox virus (strain NVSL) (FPV)

Query: 1 ICCFLS 6
ICCFLS
Sbjct: 566 ICCFLS 571


>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)

Query: 2 CCFLSVI 8
CCFLS++
Sbjct: 467 CCFLSLL 473


>sp|RDRP_FDVS|RNA-DIRECTED RNA polymerase VP1|Fiji disease virus (isolate Sugarcane)

Query: 2 CCFLSVIH 9
CC SV+H
Sbjct: 342 CCLPSVMH 349


>sp|POL1_BRSV|RNA1 polyprotein|Beet ringspot virus (BRSV) (Tomato

Query: 1 ICCFLS 6
+CC+LS
Sbjct: 1244 VCCYLS 1249


>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 2 CCFLSVIHS 10
CCFL++ +S
Sbjct: 400 CCFLNITNS 408


>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 2 CCFLSVIHS 10
CCFL++ +S
Sbjct: 400 CCFLNITNS 408


>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 2 CCFLSVIHS 10
CCFL++ +S
Sbjct: 400 CCFLNITNS 408


>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 2 CCFLSVIHS 10
CCFL++ +S
Sbjct: 400 CCFLNITNS 408


>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 2 CCFLSVIHS 10
CCFL++ +S
Sbjct: 400 CCFLNITNS 408


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 1 ICCFLSVI 8
I CF+SV+
Sbjct: 2438 ILCFMSVV 2445


>sp|POLG_FMDVI|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 3 CFLSVIHS 10
CF++++H+
Sbjct: 6 CFIALVHA 13


>sp|POLG_FMDVC|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 3 CFLSVIHS 10
CF++++H+
Sbjct: 6 CFIALVHA 13


>sp|POLG_FMDVA|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 3 CFLSVIHS 10
CF++++H+
Sbjct: 6 CFIALVHA 13


>sp|POLG_FMDV5|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 3 CFLSVIHS 10
CF++++H+
Sbjct: 6 CFIALVHA 13


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 ICCFLSVIHS 10
+CCF+ +H+
Sbjct: 3427 LCCFVMGLHT 3436


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 ICCFLSVIHS 10
+CCF+ +H+
Sbjct: 3427 LCCFVMGLHT 3436


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1 ICCFLSVIHS 10
IC F++++H+
Sbjct: 3380 ICLFVALLHT 3389




229|SequenceR|1150|1141|KRRKCICCFL

>sp|HELI_EHV2|DNA replication helicase|Equine herpesvirus 2 (strain 86/87)

Query: 1 KRRKCICCFL 10
K +KCIC F+
Sbjct: 451 KTKKCICGFM 460


>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P

Query: 1 KRRKCICCF 9
K +KCIC F
Sbjct: 456 KTKKCICGF 464


>sp|POLN_AHEV|NON-STRUCTURAL polyprotein pORF1|Avian hepatitis E virus (isolate

Query: 1 KRRKCICC 8
KR KC CC
Sbjct: 448 KRVKCGCC 455


>sp|V022_FOWPN|PUTATIVE ankyrin repeat protein FPV022|Fowlpox virus (strain NVSL) (FPV)

Query: 3 RKCICCFL 10
R ICCFL
Sbjct: 563 RSIICCFL 570


>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P

Query: 1 KRRKCIC 7
+RR+C+C
Sbjct: 612 ERRECVC 618


>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 4 KCICC 8
KC+CC
Sbjct: 793 KCVCC 797


>sp|TGB2_FXMV|MOVEMENT protein TGB2|Foxtail mosaic virus

Query: 1 KRRKCICCFL 10
+R +C+ CF+
Sbjct: 109 RRSRCVRCFV 118


>sp|KITH_SUHVN|THYMIDINE kinase|Suid herpesvirus 1 (strain NIA-3)

Query: 3 RKCICCF 9
R+C+C F
Sbjct: 308 RQCVCAF 314


>sp|PTPH5_MDBVW|TYROSINE phosphatase-like protein H5|Microplitis demolitor bracovirus

Query: 1 KRRKCICC 8
++RK ICC
Sbjct: 109 EKRKFICC 116


>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 4 KCICC 8
KC+CC
Sbjct: 794 KCVCC 798


>sp|YR713_MIMIV|UNCHARACTERIZED protein R713|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 KCICC 8
+CICC
Sbjct: 325 QCICC 329


>sp|GP_BUNGE|ENVELOPMENT polyprotein|Bunyavirus germiston

Query: 3 RKCICCFL 10
+KCICC L
Sbjct: 256 KKCICCGL 263


>sp|VNS1_EHDV2|NON-STRUCTURAL protein NS1|Epizootic hemorrhagic disease virus 2

Query: 2 RRKCICCFL 10
R KC CFL
Sbjct: 333 RHKCQLCFL 341


>sp|VP4_FDVS|UNCHARACTERIZED protein VP4|Fiji disease virus (isolate Sugarcane)

Query: 3 RKCICCF 9
+KCI CF
Sbjct: 713 KKCIECF 719


>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 4 KCICC 8
KC+CC
Sbjct: 793 KCMCC 797


>sp|3602L_ASFP4|PROTEIN MGF 360-2L|African swine fever virus (isolate

Query: 6 ICCFL 10
ICCFL
Sbjct: 157 ICCFL 161


>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)

Query: 4 KCICCFL 10
KCI CF+
Sbjct: 163 KCITCFV 169


>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)

Query: 4 KCICCFL 10
KCI CF+
Sbjct: 163 KCITCFV 169


>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)

Query: 4 KCICCFL 10
KCI CF+
Sbjct: 163 KCITCFV 169


>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 4 KCICC 8
+C+CC
Sbjct: 794 RCVCC 798


>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 4 KCICC 8
+C+CC
Sbjct: 794 RCVCC 798


>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 4 KCICC 8
+C+CC
Sbjct: 794 RCVCC 798


>sp|Y12K_CMVSI|UNCHARACTERIZED 12.4 kDa protein|Cymbidium mosaic virus (strain Singapore)

Query: 2 RRKCICC 8
RR C CC
Sbjct: 100 RRICPCC 106


>sp|3602L_ASFB7|PROTEIN MGF 360-2L|African swine fever virus (strain

Query: 6 ICCFL 10
ICCFL
Sbjct: 157 ICCFL 161


>sp|YL381_MIMIV|UNCHARACTERIZED protein L381|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 KCICC 8
KC CC
Sbjct: 160 KCYCC 164


>sp|TGB2_ASPVP|MOVEMENT protein TGB2|Apple stem pitting virus (isolate

Query: 3 RKCICC 8
R+C CC
Sbjct: 102 RRCSCC 107




230|SequenceR|1155|1146|STKDKKRRKC

***** No hits found ******


231|SequenceR|1160|1151|LKPGDSTKDK

>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)

Query: 1 LKPGDSTK 8
LKPG+ST+
Sbjct: 416 LKPGESTR 423


>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 LKPGDSTK 8
LKPG+ST+
Sbjct: 416 LKPGESTR 423


>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 1 LKPGDS 6
LKPGDS
Sbjct: 1196 LKPGDS 1201


>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 1 LKPGDS 6
LKPGDS
Sbjct: 1194 LKPGDS 1199


>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 1 LKPGDS 6
LKPGDS
Sbjct: 1194 LKPGDS 1199


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 1 LKPGDS 6
LKPGDS
Sbjct: 3044 LKPGDS 3049


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 LKPGDS 6
LKPGDS
Sbjct: 3117 LKPGDS 3122


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 LKPGDS 6
LKPGDS
Sbjct: 1196 LKPGDS 1201


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 LKPGDS 6
LKPGDS
Sbjct: 1194 LKPGDS 1199


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 LKPGDS 6
LKPGDS
Sbjct: 1194 LKPGDS 1199


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1 LKPGDS 6
LKPGDS
Sbjct: 3044 LKPGDS 3049


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 LKPGDS 6
LKPGDS
Sbjct: 3117 LKPGDS 3122


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 1 LKPGDSTKDK 10
L P D KDK
Sbjct: 1016 LGPADDVKDK 1025




232|SequenceR|1165|1156|EETLFLKPGD

>sp|GB_EHV2|ENVELOPE glycoprotein B|Equine herpesvirus 2 (strain 86/87)

Query: 2 ETLFLKPGD 10
ET FLKP D
Sbjct: 172 ETAFLKPAD 180


>sp|Y046_SIFVH|UNCHARACTERIZED protein 46|Sulfolobus islandicus filamentous virus (isolate

Query: 1 EETLFLKPGD 10
E+T+FL P D
Sbjct: 50 EDTIFLNPSD 59


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 EETLFLKPGD 10
+ TLF+K GD
Sbjct: 5284 QHTLFIKDGD 5293


>sp|RDRP_AQRVG|RNA-DIRECTED RNA polymerase VP2|Aquareovirus G (isolate American grass

Query: 3 TLFLKPGD 10
+LF+ PGD
Sbjct: 896 SLFMPPGD 903


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 1 EETLFLKPGD 10
+ET+F++P D
Sbjct: 852 KETVFVEPKD 861


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1 EETLFLKPGD 10
+ET+F++P D
Sbjct: 852 KETVFVEPKD 861


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1 EETLFLKPGD 10
+ TL++K GD
Sbjct: 5193 QHTLYIKDGD 5202


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 EETLFLKPGD 10
+ TL++K GD
Sbjct: 5237 QHTLYIKDGD 5246


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 EETLFLKPGD 10
+ TL++K GD
Sbjct: 5244 QHTLYIKDGD 5253




233|SequenceR|1170|1161|LKKQDEETLF

>sp|LTP_EHV2|LARGE tegument protein deneddylase|Equine herpesvirus 2 (strain 86/87)

Query: 2 KKQDEETLF 10
KKQD +TLF
Sbjct: 1255 KKQDNDTLF 1263


>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 1 LKKQDEETLF 10
LKK+D ETL
Sbjct: 742 LKKKDLETLL 751


>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)

Query: 1 LKKQDEETLF 10
LKK+D ETL
Sbjct: 742 LKKKDLETLL 751


>sp|AKT_MLVAT|AKT kinase-transforming protein|AKT8 murine leukemia virus

Query: 1 LKKQDEETL 9
LK+Q+EET+
Sbjct: 131 LKRQEEETM 139


>sp|Y162_AFV2P|UNCHARACTERIZED protein ORF162|Acidianus filamentous virus 2 (isolate

Query: 1 LKKQDEETL 9
L+K D+ETL
Sbjct: 28 LRKVDDETL 36


>sp|RMIL_AVII1|SERINE/THREONINE-PROTEIN kinase-transforming protein Rmil|Avian retrovirus IC10

Query: 2 KKQDEETLF 10
KK+DE LF
Sbjct: 309 KKRDERPLF 317


>sp|RMIL_AVEVR|SERINE/THREONINE-PROTEIN kinase-transforming protein Rmil|Avian rous-associated virus type 1

Query: 2 KKQDEETLF 10
KK+DE LF
Sbjct: 325 KKRDERPLF 333




234|SequenceR|1175|1166|EEFDHLKKQD

>sp|SUNT_BPSPB|SUBLANCIN-168-PROCESSING and transport ATP-binding protein|Bacillus phage SPbeta (Bacillus

Query: 3 FDHLKKQD 10
FDHLKK++
Sbjct: 326 FDHLKKKN 333


>sp|POL_GALV|GAG-POL polyprotein|Gibbon ape leukemia virus (GALV)

Query: 1 EEFDHLKK 8
+ FDH+KK
Sbjct: 980 QAFDHIKK 987


>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988

Query: 1 EEFDHLKKQ 9
+EF+HL+K+
Sbjct: 412 KEFNHLEKR 420


>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New

Query: 1 EEFDHLKKQ 9
+EF+HL+K+
Sbjct: 412 KEFNHLEKR 420


>sp|HELI_ALHV1|DNA replication helicase|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 EFDHLKKQ 9
+FDH K+Q
Sbjct: 246 QFDHSKQQ 253


>sp|Y041_OSHVF|UNCHARACTERIZED protein ORF41|Ostreid herpesvirus 1 (isolate France)

Query: 1 EEFDHLKKQ 9
E+FD +KK+
Sbjct: 916 EDFDRVKKE 924


>sp|YL233_MIMIV|PUTATIVE zinc protease L233|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 EEFDHLKKQD 10
+ DHL K+D
Sbjct: 394 DNLDHLSKED 403




235|SequenceR|1180|1171|MEVCQEEFDH

>sp|POLG_PPVSK|GENOME polyprotein|Plum pox potyvirus (strain SK

Query: 2 EVCQEEFDH 10
EV QEE DH
Sbjct: 2040 EVGQEEVDH 2048


>sp|NRAM_I79A7|NEURAMINIDASE A virus (strain A/Grey

Query: 3 VCQEEF 8
VCQ+EF
Sbjct: 231 VCQDEF 236


>sp|NRAM_I68A3|NEURAMINIDASE A virus (strain A/Turkey/Ontario/6118/1968

Query: 3 VCQEEF 8
VCQ+EF
Sbjct: 231 VCQDEF 236


>sp|ORFA_PSHV1|UNCHARACTERIZED protein ORFA|Psittacid herpesvirus 1 (isolate Amazon

Query: 3 VCQEEFD 9
VC+E FD
Sbjct: 184 VCRESFD 190


>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)

Query: 1 MEVCQEEFDH 10
ME+ +E +DH
Sbjct: 122 MEMVEEVYDH 131


>sp|MAT_INCCA|POLYPROTEIN p42|Influenza C virus (strain C/California/1978)

Query: 1 MEVCQEEFDH 10
ME+ +E +DH
Sbjct: 122 MEMVEEVYDH 131


>sp|MAT_INCHY|POLYPROTEIN p42|Influenza C virus (strain C/Hyogo/1/1983)

Query: 1 MEVCQEEFDH 10
ME+ +E +DH
Sbjct: 122 MEMVEEVYDH 131


>sp|MAT_INCJJ|POLYPROTEIN p42|Influenza C virus (strain C/JJ/1950)

Query: 1 MEVCQEEFDH 10
ME+ +E +DH
Sbjct: 122 MEMVEEVYDH 131


>sp|MAT_INCAA|POLYPROTEIN p42|Influenza C virus (strain C/Ann

Query: 1 MEVCQEEFDH 10
ME+ +E +DH
Sbjct: 122 MEMVEEVYDH 131


>sp|US03_PSHV1|PROTEIN kinase US3 homolog|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 MEVCQEEF 8
+ VC EEF
Sbjct: 376 LSVCDEEF 383


>sp|148R_IIV6|PUTATIVE MSV199 domain-containing protein 148R|Invertebrate iridescent

Query: 1 MEVCQEEFDH 10
ME+ ++EF+H
Sbjct: 31 MEIIKKEFEH 40


>sp|VSR_POPMV|RNA silencing suppressor|Poplar mosaic virus (isolate ATCC

Query: 1 MEVCQEEFDH 10
M+V +E +DH
Sbjct: 11 MQVFRERYDH 20




236|SequenceR|1185|1176|KENFYMEVCQ

>sp|L_IPPYV|RNA-DIRECTED RNA polymerase L|Ippy mammarenavirus (isolate Rat/Central African

Query: 2 ENFYMEVCQ 10
ENFY EVC+
Sbjct: 964 ENFYKEVCE 972


>sp|PRIM_ALHV1|DNA primase|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 ENFYMEVC 9
ENFY+ VC
Sbjct: 221 ENFYLYVC 228


>sp|GC_MEHVH|ENVELOPE glycoprotein C homolog|Meleagrid herpesvirus 1 (strain H2)

Query: 1 KENFYMEVCQ 10
+++ YM VCQ
Sbjct: 239 EKHIYMRVCQ 248


>sp|GC_MEHVF|ENVELOPE glycoprotein C homolog|Meleagrid herpesvirus 1 (strain FC126)

Query: 1 KENFYMEVCQ 10
+++ YM VCQ
Sbjct: 238 EKHIYMRVCQ 247


>sp|DPOL_CBEPV|DNA polymerase|Choristoneura biennis entomopoxvirus (CbEPV)

Query: 3 NFYMEVC 9
NFY+E+C
Sbjct: 915 NFYIELC 921


>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 ENFYMEV 8
ENFY E+
Sbjct: 30 ENFYAEI 36


>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 ENFYMEV 8
ENFY E+
Sbjct: 30 ENFYAEI 36


>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 ENFYMEV 8
ENFY E+
Sbjct: 30 ENFYAEI 36


>sp|POLG_PEMVM|GENOME polyprotein|Peanut mottle virus (strain M)

Query: 1 KENFYMEVCQ 10
KE F+ VC+
Sbjct: 1097 KEEFFQYVCK 1106




237|SequenceR|1190|1181|HFKDDKENFY

>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 1 HFKDDKENFY 10
H KDD+E Y
Sbjct: 1637 HLKDDEETGY 1646


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 1 HFKDDKENFY 10
HF +DK FY
Sbjct: 2195 HFTNDKTIFY 2204


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 1 HFKDDKENFY 10
HF +DK FY
Sbjct: 2215 HFTNDKTIFY 2224


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 1 HFKDDKENFY 10
HF +DK FY
Sbjct: 2245 HFTNDKTIFY 2254


>sp|R1A_CVPPU|REPLICASE polyprotein 1a|Porcine transmissible gastroenteritis coronavirus

Query: 2 FKDDKENFY 10
+KD+ E+FY
Sbjct: 854 YKDEDEHFY 862


Query: 2 FKDDKENF 9
FKDDK F
Sbjct: 639 FKDDKSIF 646


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1 HFKDDKENFY 10
HF +DK FY
Sbjct: 2215 HFTNDKTIFY 2224


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1 HFKDDKENFY 10
HF +DK FY
Sbjct: 2195 HFTNDKTIFY 2204


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1 HFKDDKENFY 10
HF +DK FY
Sbjct: 2245 HFTNDKTIFY 2254


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 2 FKDDKENFY 10
+KD+ E+FY
Sbjct: 854 YKDEDEHFY 862


>sp|ENV_SIVVT|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.vervet

Query: 1 HFKDDKENFY 10
+ +D K+N+Y
Sbjct: 173 YVRDQKKNYY 182


>sp|SPIKE_BC133|SPIKE glycoprotein|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 2 FKDDKENFY 10
FKD+ E F+
Sbjct: 1230 FKDELEEFF 1238


>sp|SPIKE_BCHK4|SPIKE glycoprotein|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 2 FKDDKENFY 10
FKD+ E F+
Sbjct: 1232 FKDELEEFF 1240


>sp|CAPSD_AAV2S|CAPSID protein VP1|Adeno-associated virus 2 (isolate Srivastava/1982)

Query: 3 KDDKENFY 10
KDD+E F+
Sbjct: 527 KDDEEKFF 534




238|SequenceR|1195|1186|EESGSHFKDD

>sp|VG67_ICHVA|UNCHARACTERIZED protein ORF67|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 ESGSHFK 8
ESGSHF+
Sbjct: 457 ESGSHFR 463


>sp|RPOA_EAVBU|REPLICASE polyprotein 1ab|Equine arteritis virus (strain Bucyrus)

Query: 5 SHFKDD 10
+HFKDD
Sbjct: 1545 AHFKDD 1550


>sp|POL_MMTVB|GAG-PRO-POL polyprotein|Mouse mammary tumor virus (strain

Query: 1 EESGSHFKDD 10
EE +H+ DD
Sbjct: 214 EEQAAHYHDD 223


>sp|POL_MMTVC|GAG-PRO-POL polyprotein|Mouse mammary tumor virus (strain

Query: 1 EESGSHFKDD 10
EE +H+ DD
Sbjct: 214 EEQAAHYHDD 223


>sp|POL_SIVS4|GAG-POL polyprotein|Simian immunodeficiency virus (isolate F236/smH4)

Query: 2 ESGSHFKD 9
+SGSH +D
Sbjct: 1434 DSGSHLED 1441


>sp|CAPSD_ADVG|CAPSID protein VP1|Aleutian mink disease parvovirus (strain

Query: 3 SGSHFKDD 10
SG+HF+D+
Sbjct: 511 SGTHFEDE 518


>sp|POL_SIVSP|GAG-POL polyprotein|Simian immunodeficiency virus (isolate PBj14/BCL-3)

Query: 2 ESGSHFKD 9
+SGSH +D
Sbjct: 1434 DSGSHLED 1441




239|SequenceR|1200|1191|TVRIREESGS

>sp|L_TIBVC|RNA-DIRECTED RNA polymerase L|Tibrogargan virus (strain CS132) (TIBV)

Query: 1 TVRIREE 7
TVRIREE
Sbjct: 1003 TVRIREE 1009


>sp|P32K_ADES1|STRUCTURAL protein p32K|Snake adenovirus serotype 1 (SnAdV-1)

Query: 2 VRIREESGS 10
VRIREE G+
Sbjct: 148 VRIREEEGN 156




240|SequenceR|1205|1196|EVREFTVRIR

>sp|YL364_MIMIV|PUTATIVE ATP-dependent RNA helicase L364|Acanthamoeba polyphaga mimivirus

Query: 1 EVREFTVRIR 10
E++E+T RIR
Sbjct: 260 EIKEYTSRIR 269


>sp|PTPD1_MDBVW|TRUNCATED tyrosine phosphatase D1|Microplitis demolitor bracovirus (isolate

Query: 1 EVREFTVRIR 10
E REF +R+R
Sbjct: 120 ECREFRIRLR 129


>sp|POLG_PRSVH|GENOME polyprotein|Papaya ringspot virus (strain P

Query: 1 EVREFTVRIR 10
E ++FT R+R
Sbjct: 906 EAKDFTKRVR 915




241|SequenceR|1210|1201|QICMQEVREF

>sp|POL_FLV|GAG-POL polyprotein|Feline leukemia virus

Query: 1 QICMQEV 7
QIC+QEV
Sbjct: 886 QICLQEV 892


>sp|Y003_HIS1I|UNCHARACTERIZED protein ORF3|His1 virus (isolate Australia/Victoria) (His1V)

Query: 1 QICMQEVREF 10
Q+C+QEV+ F
Sbjct: 57 QLCIQEVKRF 66


>sp|VG63_ICHVA|UNCHARACTERIZED protein ORF63|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 QICMQEVRE 9
++C Q +RE
Sbjct: 426 ELCFQNIRE 434


>sp|DPOL_ADEG1|DNA polymerase|Fowl adenovirus A serotype 1

Query: 1 QICMQEVR 8
+ CMQ+VR
Sbjct: 379 EYCMQDVR 386




242|SequenceR|1215|1206|GVEKIQICMQ

>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)

Query: 3 EKIQICMQ 10
EKI+IC+Q
Sbjct: 2 EKIKICLQ 9


>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)

Query: 3 EKIQICMQ 10
EKI+IC+Q
Sbjct: 1 EKIKICLQ 8


>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)

Query: 3 EKIQICMQ 10
EKI+IC+Q
Sbjct: 1 EKIKICLQ 8


>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)

Query: 3 EKIQICMQ 10
EKI+IC+Q
Sbjct: 1 EKIKICLQ 8


>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)

Query: 3 EKIQICMQ 10
EKI+IC+Q
Sbjct: 2 EKIKICLQ 9


>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann

Query: 3 EKIQICMQ 10
EKI+IC+Q
Sbjct: 15 EKIKICLQ 22


>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great

Query: 3 EKIQICMQ 10
EKI+IC+Q
Sbjct: 2 EKIKICLQ 9


>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)

Query: 3 EKIQICMQ 10
EKI+IC+Q
Sbjct: 2 EKIKICLQ 9


>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 3 EKIQICMQ 10
EKI+IC+Q
Sbjct: 15 EKIKICLQ 22


>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)

Query: 3 EKIQICMQ 10
EKI+IC+Q
Sbjct: 15 EKIKICLQ 22


>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)

Query: 3 EKIQICMQ 10
EKI+IC+Q
Sbjct: 8 EKIKICLQ 15


>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)

Query: 3 EKIQICMQ 10
EKI+IC+Q
Sbjct: 2 EKIKICLQ 9


>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)

Query: 3 EKIQICMQ 10
EKI+IC+Q
Sbjct: 8 EKIKICLQ 15


>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)

Query: 3 EKIQICMQ 10
EKI+IC+Q
Sbjct: 2 EKIKICLQ 9


>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)

Query: 3 EKIQICMQ 10
EKI+IC+Q
Sbjct: 2 EKIKICLQ 9


>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)

Query: 3 EKIQICMQ 10
EKI+IC+Q
Sbjct: 2 EKIKICLQ 9


>sp|VNS1_EHDV2|NON-STRUCTURAL protein NS1|Epizootic hemorrhagic disease virus 2

Query: 3 EKIQIC 8
EKIQIC
Sbjct: 99 EKIQIC 104


>sp|POL_SOCMV|ENZYMATIC polyprotein|Soybean chlorotic mottle virus

Query: 3 EKIQICMQ 10
EKI IC++
Sbjct: 153 EKIHICLE 160




243|SequenceR|1220|1211|YNVRDGVEKI

>sp|VG77_ICHVA|UNCHARACTERIZED protein ORF77|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 VRDGVEKI 10
VRD +EKI
Sbjct: 139 VRDAIEKI 146


>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58

Query: 1 YNVRDGVEKI 10
+NV++GV+ I
Sbjct: 70 FNVQEGVDDI 79




244|SequenceR|1225|1216|LSRKIYNVRD

>sp|VP6_ROTJ1|INTERMEDIATE capsid protein VP6|Rotavirus X (strain

Query: 4 KIYNVRD 10
K+YN+RD
Sbjct: 47 KVYNLRD 53


>sp|VP6_ROTB2|INTERMEDIATE capsid protein VP6|Rotavirus X (isolate

Query: 4 KIYNVRD 10
K+YN+RD
Sbjct: 47 KVYNLRD 53




245|SequenceR|1230|1221|SDLSQLSRKI

>sp|YR793_MIMIV|UNCHARACTERIZED protein R793|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 SDLSQLSRKI 10
+DL QLS KI
Sbjct: 39 TDLKQLSSKI 48


>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)

Query: 1 SDLSQLSRKI 10
SDL +L RK+
Sbjct: 104 SDLEKLKRKV 113




246|SequenceR|1235|1226|LHGIQSDLSQ

>sp|Y1070_SIRV1|UNCHARACTERIZED protein 1070|Sulfolobus islandicus rod-shaped virus 1

Query: 2 HGIQSDLSQ 10
HGI SD+S+
Sbjct: 734 HGILSDISK 742


>sp|RPC1_BPHK0|26 kDa repressor protein|Escherichia phage HK022 (Bacteriophage

Query: 1 LHGIQSDLS 9
LHG Q+DL+
Sbjct: 25 LHGRQADLA 33




247|SequenceR|1240|1231|ASLDQLHGIQ

>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B

Query: 3 LDQLHGIQ 10
LD+LHG+Q
Sbjct: 720 LDELHGVQ 727


>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A

Query: 3 LDQLHGIQ 10
LD+LHG+Q
Sbjct: 720 LDELHGVQ 727


>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus

Query: 3 LDQLHGIQ 10
LD+LHG+Q
Sbjct: 720 LDELHGVQ 727


>sp|L_BRSVA|RNA-DIRECTED RNA polymerase L|Bovine respiratory syncytial virus (strain

Query: 3 LDQLHGIQ 10
LD+LHG+Q
Sbjct: 717 LDELHGVQ 724


>sp|L_MPV15|RNA-DIRECTED RNA polymerase L|Murine pneumonia virus (strain 15)

Query: 3 LDQLHGIQ 10
LD+LHG Q
Sbjct: 667 LDELHGTQ 674


>sp|L_AMPV1|RNA-DIRECTED RNA polymerase L|Avian metapneumovirus (isolate Canada

Query: 3 LDQLHGIQ 10
+D+LHG Q
Sbjct: 655 VDELHGTQ 662


>sp|MVP_TAV|MOVEMENT protein|Tomato aspermy virus (TAV)

Query: 1 ASLDQLHGI 9
AS D+LH I
Sbjct: 17 ASTDELHNI 25




248|SequenceR|1245|1236|TDVTLASLDQ

>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5

Query: 2 DVTLASLDQ 10
D+TLA LD+
Sbjct: 1166 DMTLARLDE 1174


>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2

Query: 2 DVTLASLDQ 10
D+TLA LD+
Sbjct: 1166 DMTLARLDE 1174


>sp|ORF1_HAPV1|UNCHARACTERIZED protein 1|Halorubrum pleomorphic virus 1 (HRPV-1)

Query: 1 TDVTLASLDQ 10
+DV LAS+D+
Sbjct: 434 SDVRLASVDE 443




249|SequenceR|1250|1241|TLTKLTDVTL

>sp|L_CPSVP|RNA-DIRECTED RNA polymerase L|Citrus psorosis virus (isolate Spain/P-121)

Query: 1 TLTKLTDVTL 10
+L KLTD+T+
Sbjct: 1322 SLRKLTDITI 1331




250|SequenceR|1255|1246|SAKQATLTKL

***** No hits found ******


251|SequenceR|1260|1251|VKSAESAKQA

***** No hits found ******


252|SequenceR|1265|1256|TIENHVKSAE

>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)

Query: 2 IENHVKS 8
IENHVK+
Sbjct: 292 IENHVKN 298




253|SequenceR|1270|1261|ISLERTIENH

>sp|UNG_HHV7J|URACIL-DNA glycosylase|Human herpesvirus 7 (strain JI)

Query: 3 LERTIEN 9
LERTIEN
Sbjct: 122 LERTIEN 128




254|SequenceR|1275|1266|ALHKSISLER

***** No hits found ******


255|SequenceR|1280|1271|DILNQALHKS

>sp|PP220_ASFK5|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 DILNQALHK 9
D +NQALH+
Sbjct: 2156 DYINQALHE 2164


>sp|P12_BPPH6|MORPHOGENETIC protein|Pseudomonas phage phi6 (Bacteriophage phi-6)

Query: 1 DILNQALHK 9
D+L Q LHK
Sbjct: 107 DVLVQLLHK 115


>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus

Query: 2 ILNQALHK 9
+LN ALHK
Sbjct: 1220 LLNAALHK 1227


>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate Human/India/Ind3/1967)

Query: 2 ILNQALHK 9
+LN ALHK
Sbjct: 1220 LLNAALHK 1227


>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 2 ILNQALHK 9
+LN ALHK
Sbjct: 1220 LLNAALHK 1227


>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)

Query: 2 ILNQALHK 9
+LN ALHK
Sbjct: 1220 LLNAALHK 1227


>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 ILNQALHK 9
+LN ALHK
Sbjct: 1220 LLNAALHK 1227


>sp|RP147_VACCW|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Western Reserve)

Query: 2 ILNQALHK 9
+LN ALHK
Sbjct: 1221 LLNAALHK 1228




256|SequenceR|1285|1276|RVPGDDILNQ

>sp|NCAP_CHAV|NUCLEOPROTEIN virus (strain I653514) (CHPV)

Query: 1 RVPGDDI 7
R+PGDD+
Sbjct: 127 RLPGDDL 133


>sp|VG10_ICHVA|PUTATIVE membrane protein ORF10|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 RVPGDDIL 8
R PGDD++
Sbjct: 33 RAPGDDLV 40


>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 2 VPGDDI 7
VPGDDI
Sbjct: 844 VPGDDI 849


>sp|L_NDVB1|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Chicken/United

Query: 1 RVPGDDI 7
RVP DDI
Sbjct: 702 RVPNDDI 708


>sp|L_NDVB|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Beaudette

Query: 1 RVPGDDI 7
RVP DDI
Sbjct: 702 RVPNDDI 708


>sp|TAT_HV2ST|PROTEIN Tat|Human immunodeficiency virus type 2

Query: 3 PGDDILNQ 10
PGD+IL Q
Sbjct: 35 PGDEILYQ 42


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 3 PGDDIL 8
PGDD+L
Sbjct: 1580 PGDDVL 1585


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 RVPGDDILNQ 10
R+ DD+LN+
Sbjct: 3028 RITEDDLLNE 3037


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 RVPGDDILNQ 10
R+ DD+LN+
Sbjct: 3028 RITEDDLLNE 3037


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 RVPGDDILNQ 10
R+ DD+LN+
Sbjct: 3028 RITEDDLLNE 3037


>sp|SCAF_ELHVK|CAPSID scaffolding protein|Elephantid herpesvirus 1 (isolate Asian

Query: 3 PGDDILNQ 10
P DDILN
Sbjct: 543 PRDDILNH 550


>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)

Query: 1 RVPGDDILN 9
R G+D+LN
Sbjct: 331 RAAGEDVLN 339




257|SequenceR|1290|1281|KWVSPRVPGD

>sp|O1_FOWPN|PROTEIN O1 homolog|Fowlpox virus (strain NVSL) (FPV)

Query: 1 KWVSPRVPGD 10
KW+S ++P D
Sbjct: 249 KWISTQLPPD 258


>sp|POL1_BAMMN|GENOME polyprotein 1|Barley mild mosaic virus (strain

Query: 2 WVSPRVPGD 10
WVSPR D
Sbjct: 1069 WVSPRKQDD 1077


>sp|YR528_MIMIV|PUTATIVE 5'-3' exonuclease R528|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 WVSPRVPG 9
+VSP +PG
Sbjct: 518 YVSPMIPG 525


>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human

Query: 2 WVSPRVPGD 10
W S R PG+
Sbjct: 174 WTSSRCPGE 182


>sp|GLYCO_PIRYV|GLYCOPROTEIN virus (PIRYV)

Query: 2 WVSPRVPG 9
++SPR PG
Sbjct: 324 YLSPRAPG 331


>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka

Query: 1 KWVSPRVPG 9
+ ++PRVPG
Sbjct: 305 RGITPRVPG 313


>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain

Query: 1 KWVSPRVPG 9
+ ++PRVPG
Sbjct: 305 RGITPRVPG 313


>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 2 WVSPRVPGD 10
W+ P++ GD
Sbjct: 1919 WMHPQLEGD 1927


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 1 KWVSPRVPGD 10
KW+ PR D
Sbjct: 2770 KWIGPRYEKD 2779


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 3 VSPRVPG 9
++PR+PG
Sbjct: 2004 ITPRIPG 2010




258|SequenceR|1295|1286|VVGHKKWVSP

>sp|CAPS4_NORAV|ORF4 polyprotein|Nora virus

Query: 1 VVGHKKWVSP 10
VV H W+ P
Sbjct: 48 VVNHPAWIDP 57


>sp|NSP6_ROT41|NON-STRUCTURAL protein 6|Rotavirus A (isolate

Query: 1 VVGHKKWVSP 10
++G KW+SP
Sbjct: 83 MLGAIKWISP 92


>sp|DPOLA_BPPM6|DNA-DIRECTED DNA polymerase|Pseudomonas phage M6

Query: 1 VVGHKKWVS 9
++GH+ W+S
Sbjct: 425 LIGHQAWLS 433


>sp|NSP6_ROTH7|NON-STRUCTURAL protein 6|Rotavirus A (isolate RVA/Human/United

Query: 1 VVGHKKWVSP 10
++G KW+SP
Sbjct: 83 MLGAIKWISP 92


>sp|NSP6_ROTPY|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Pig/Mexico/YM/1983/G11P9[7])

Query: 2 VGHKKWVSP 10
+G KW+SP
Sbjct: 84 LGAIKWISP 92


>sp|NSP6_ROTHW|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/United

Query: 2 VGHKKWVSP 10
+G KW+SP
Sbjct: 84 LGAIKWISP 92


>sp|NSP6_ROTHK|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])

Query: 2 VGHKKWVSP 10
+G KW+SP
Sbjct: 84 LGAIKWISP 92


>sp|L_HIRRV|RNA-DIRECTED RNA polymerase L|Hirame rhabdovirus (strain Korea/CA 9703/1997)

Query: 2 VGHKKWVSP 10
V ++KWV+P
Sbjct: 1252 VFNRKWVTP 1260


>sp|DPOL_CEV01|DNA polymerase|Chrysochromulina ericina virus (CeV01)

Query: 4 HKKWVSP 10
H+KW P
Sbjct: 1589 HEKWTEP 1595


>sp|NSP6_ROTW3|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Cow/United

Query: 1 VVGHKKWVSP 10
++G KW+SP
Sbjct: 83 MLGAIKWISP 92


>sp|NSP6_ROTBU|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Cow/United

Query: 2 VGHKKWVSP 10
+G KW+SP
Sbjct: 84 LGAIKWISP 92


>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1 VVGHKKWV 8
++G+KKWV
Sbjct: 550 LIGNKKWV 557


>sp|NSP6_ROTRF|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Cow/France/RF/1975/G6P6[1])

Query: 1 VVGHKKWVSP 10
++G KW+SP
Sbjct: 83 MLGAIKWISP 92


>sp|VP2_BTV17|OUTER capsid protein VP2|Bluetongue virus 17 (isolate USA)

Query: 1 VVGHKKWV 8
VVG KW+
Sbjct: 208 VVGQPKWI 215


>sp|NSP6_ROTRA|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Rabbit/United

Query: 1 VVGHKKWVSP 10
++G KW+SP
Sbjct: 66 MLGAIKWISP 75


>sp|UVSW_BPT4|ATP-DEPENDENT DNA helicase uvsW|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 GHKKWVSP 10
G+K W+ P
Sbjct: 76 GYKAWIDP 83


>sp|RNH_BPT4|RIBONUCLEASE H|Enterobacteria phage T4 (Bacteriophage T4)

Query: 4 HKKWV 8
HKKWV
Sbjct: 174 HKKWV 178


>sp|YL613_MIMIV|UNCHARACTERIZED protein L613|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 VGHKKWVS 9
+GH WVS
Sbjct: 138 IGHSIWVS 145


>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 1 VVGHKKW 7
V HKKW
Sbjct: 553 VTNHKKW 559


>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)

Query: 1 VVGHKKW 7
V HKKW
Sbjct: 553 VTNHKKW 559


>sp|POL1_BBWVS|RNA1 polyprotein|Broad bean wilt virus 1

Query: 1 VVGHKKWVSP 10
V+ KWV P
Sbjct: 1647 VISKLKWVEP 1656


>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 1 VVGHKKW 7
V HKKW
Sbjct: 553 VTNHKKW 559


>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)

Query: 1 VVGHKKW 7
V HKKW
Sbjct: 554 VTNHKKW 560


>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)

Query: 1 VVGHKKW 7
V HKKW
Sbjct: 554 VTNHKKW 560


>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African

Query: 1 VVGHKKW 7
V HKKW
Sbjct: 554 VTNHKKW 560




259|SequenceR|1300|1291|SSLTNVVGHK

***** No hits found ******


260|SequenceR|1305|1296|GQPLSSSLTN

>sp|SPIKE_CVCBG|SPIKE glycoprotein|Canine coronavirus (strain BGF10) (CCoV)

Query: 1 GQPLSSSLTN 10
GQP++SSL+N
Sbjct: 549 GQPVASSLSN 558


>sp|SPIKE_FIPV|SPIKE glycoprotein|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 1 GQPLSSSLTN 10
GQP++S+L+N
Sbjct: 548 GQPIASTLSN 557


>sp|SPIKE_CVCAK|SPIKE glycoprotein|Canine coronavirus (strain K378) (CCoV)

Query: 1 GQPLSSSLTN 10
GQP++S+L+N
Sbjct: 549 GQPIASTLSN 558


>sp|SPIKE_CVPRM|SPIKE glycoprotein|Porcine respiratory coronavirus (strain RM4)

Query: 1 GQPLSSSLTN 10
GQP++S+L+N
Sbjct: 321 GQPIASTLSN 330


>sp|SPIKE_CVPR8|SPIKE glycoprotein|Porcine respiratory coronavirus (strain 86/137004

Query: 1 GQPLSSSLTN 10
GQP++S+L+N
Sbjct: 321 GQPIASTLSN 330


>sp|SPIKE_CVPRT|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 GQPLSSSLTN 10
GQP++S+L+N
Sbjct: 543 GQPIASTLSN 552


>sp|SPIKE_CVPFS|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 GQPLSSSLTN 10
GQP++S+L+N
Sbjct: 545 GQPIASTLSN 554


>sp|SPIKE_CVPPU|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 GQPLSSSLTN 10
GQP++S+L+N
Sbjct: 543 GQPIASTLSN 552


>sp|SPIKE_CVPMI|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 GQPLSSSLTN 10
GQP++S+L+N
Sbjct: 545 GQPIASTLSN 554




261|SequenceR|1310|1301|NSELDGQPLS

>sp|NDD_BPR69|NUCLEOID disruption protein|Escherichia phage RB69 (Bacteriophage RB69)

Query: 2 SELDGQPLS 10
S+LDG+P S
Sbjct: 45 SKLDGRPFS 53


>sp|NDD_BPT2|NUCLEOID disruption protein|Enterobacteria phage T2 (Bacteriophage T2)

Query: 2 SELDGQPLS 10
S+LDG+P S
Sbjct: 45 SKLDGRPFS 53


>sp|NDD_BPR32|NUCLEOID disruption protein|Enterobacteria phage RB32 (Bacteriophage RB32)

Query: 2 SELDGQPLS 10
S+LDG+P S
Sbjct: 45 SKLDGRPFS 53


>sp|NDD_BPK3|NUCLEOID disruption protein|Enterobacteria phage K3 (Bacteriophage K3)

Query: 2 SELDGQPLS 10
S+LDG+P S
Sbjct: 45 SKLDGRPFS 53


>sp|FUS_NDVU|FUSION glycoprotein F0|Newcastle disease virus (strain Chicken/Northern

Query: 1 NSELDGQPLS 10
S LDG+PL+
Sbjct: 29 TSSLDGRPLA 38


>sp|FUS_NDVH3|FUSION glycoprotein F0|Newcastle disease virus (strain Her/33)

Query: 2 SELDGQPLS 10
S LDG+PL+
Sbjct: 30 SSLDGRPLA 38


>sp|FUS_NDVT|FUSION glycoprotein F0|Newcastle disease virus (strain Texas)

Query: 2 SELDGQPLS 10
S LDG+PL+
Sbjct: 30 SSLDGRPLA 38


>sp|FUS_NDVM|FUSION glycoprotein F0|Newcastle disease virus (strain Miyadera/51)

Query: 2 SELDGQPLS 10
S LDG+PL+
Sbjct: 30 SSLDGRPLA 38


>sp|FUS_NDVA|FUSION glycoprotein F0|Newcastle disease virus (strain

Query: 2 SELDGQPLS 10
S LDG+PL+
Sbjct: 30 SSLDGRPLA 38


>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)

Query: 4 LDGQPLS 10
LDG+PLS
Sbjct: 389 LDGRPLS 395


>sp|FUS_NDVI|FUSION glycoprotein F0|Newcastle disease virus (strain Italien/45)

Query: 2 SELDGQPLS 10
S LDG+PL+
Sbjct: 30 SSLDGRPLA 38


>sp|FUS_NDVD|FUSION glycoprotein F0|Newcastle disease virus (strain D26/76)

Query: 2 SELDGQPLS 10
S LDG+PL+
Sbjct: 30 SSLDGRPLA 38


>sp|22K_ADES1|PUTATIVE protein 22K|Snake adenovirus serotype 1 (SnAdV-1)

Query: 2 SELDGQPL 9
S LDG+PL
Sbjct: 54 SSLDGEPL 61


>sp|FUS_NDVQ|FUSION glycoprotein F0|Newcastle disease virus (strain Queensland/66)

Query: 2 SELDGQPLS 10
S LDG+PL+
Sbjct: 30 SALDGRPLA 38




262|SequenceR|1315|1306|CHFPNNSELD

>sp|TERL_LAMBD|TERMINASE, large subunit|Escherichia phage lambda (Bacteriophage lambda)

Query: 2 HFPNNSEL 9
HFPNN ++
Sbjct: 544 HFPNNPDI 551


>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 HFPNNSEL 9
HFPNN+ +
Sbjct: 342 HFPNNTAI 349


>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)

Query: 3 FPNNSELD 10
+PN+S+LD
Sbjct: 213 YPNSSDLD 220


>sp|SPIKE_PEDV7|SPIKE glycoprotein|Porcine epidemic diarrhea virus (strain

Query: 1 CHFPNNSEL 9
C FP+N L
Sbjct: 122 CQFPDNKTL 130


>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 3 FPNNSELD 10
+PN S+LD
Sbjct: 213 YPNTSDLD 220


>sp|GLYC_EMARV|ENVELOPE glycoprotein|European mountain ash ringspot-associated virus

Query: 1 CHFPNNSELD 10
C +P+NS+L+
Sbjct: 423 CDYPSNSDLE 432


>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)

Query: 1 CHFPNNSELD 10
C FPN++ +
Sbjct: 113 CRFPNSTRTE 122


>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)

Query: 1 CHFPNNSELD 10
C FPN++ +
Sbjct: 112 CRFPNSTRTE 121


>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)

Query: 1 CHFPNNSELD 10
C FPN++ +
Sbjct: 113 CRFPNSTRTE 122


>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)

Query: 3 FPNNSELD 10
FP N++LD
Sbjct: 27 FPENTKLD 34


>sp|VGLN_ARV|NON-STRUCTURAL glycoprotein|Adelaide River virus (ARV)

Query: 1 CHFPNN 6
CH+P+N
Sbjct: 394 CHYPDN 399


>sp|YL520_MIMIV|PUTATIVE BTB/POZ domain-containing protein L520|Acanthamoeba polyphaga

Query: 1 CHFPNN 6
C++PNN
Sbjct: 443 CYYPNN 448


>sp|RDRP_WCCVB|RNA-DIRECTED RNA polymerase|White clover cryptic virus 1

Query: 2 HFPNNSEL 9
HFP SE+
Sbjct: 579 HFPTKSEI 586


>sp|CVC1_HHV6U|CAPSID vertex component 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 CHFPNNSELD 10
C+FP+N D
Sbjct: 299 CNFPDNFSFD 308


>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 4 PNNSELD 10
PNN E+D
Sbjct: 62 PNNEEID 68


>sp|CD2H_ASFB7|CD2 homolog|African swine fever virus (strain

Query: 3 FPNNSEL 9
FPNN+E+
Sbjct: 87 FPNNTEI 93


>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)

Query: 4 PNNSELD 10
PNN E+D
Sbjct: 62 PNNEEID 68


>sp|3004L_ASFM2|PROTEIN MGF 300-4L|African swine fever virus (isolate

Query: 2 HFPNNSEL 9
HF N+SEL
Sbjct: 124 HFHNDSEL 131


>sp|YR401_MIMIV|UNCHARACTERIZED protein R401|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 HFPNNSEL 9
H PNNS +
Sbjct: 164 HIPNNSNV 171




263|SequenceR|1320|1311|KMLINCHFPN

>sp|1A_BBMV|REPLICATION protein 1a|Broad bean mottle virus

Query: 3 LINCHFPN 10
++N HFPN
Sbjct: 621 MVNVHFPN 628


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 3 LINCHFP 9
LINC FP
Sbjct: 1681 LINCSFP 1687


>sp|1A_PSVJ|REPLICATION protein 1a|Peanut stunt virus (strain J)

Query: 3 LINCHFPN 10
L+N HFP+
Sbjct: 651 LVNVHFPS 658


>sp|1A_TAV|REPLICATION protein 1a|Tomato aspermy virus (TAV)

Query: 3 LINCHFP 9
L+N HFP
Sbjct: 643 LVNVHFP 649


>sp|1A_CMVQ|REPLICATION protein 1a|Cucumber mosaic virus (strain Q)

Query: 3 LINCHFP 9
L+N HFP
Sbjct: 642 LVNVHFP 648


>sp|RUSA_BP82|CROSSOVER junction endodeoxyribonuclease rusA|Enterobacteria phage 82

Query: 1 KMLINCHFPN 10
K+ I CH P+
Sbjct: 56 KIRIECHMPD 65


>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)

Query: 1 KMLINCHFPN 10
++ I C FPN
Sbjct: 108 RVQIRCRFPN 117


>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)

Query: 1 KMLINCHFPN 10
++ I C FPN
Sbjct: 107 RVQIRCRFPN 116


>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)

Query: 1 KMLINCHFPN 10
++ I C FPN
Sbjct: 108 RVQIRCRFPN 117


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 2 MLINCHFPN 10
ML N H PN
Sbjct: 1998 MLDNIHLPN 2006


>sp|P56_BPGA1|PROTEIN p56|Bacillus phage GA-1 (Bacteriophage GA-1)

Query: 1 KMLINCHF 8
KML+N HF
Sbjct: 107 KMLMNMHF 114


>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain

Query: 2 MLINCHFPN 10
M+++C FP+
Sbjct: 576 MILSCFFPD 584


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 2 MLINCHFPN 10
ML N H PN
Sbjct: 1999 MLDNIHMPN 2007


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 2 MLINCHFPN 10
ML N H PN
Sbjct: 1999 MLDNIHMPN 2007


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 2 MLINCHFPN 10
ML N H PN
Sbjct: 1999 MLDNIHMPN 2007


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 2 MLINCHFPN 10
ML N H PN
Sbjct: 1999 MLDNIHMPN 2007


>sp|YL137_MIMIV|UNCHARACTERIZED protein L137|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 KMLINCHFP 9
KMLIN H+
Sbjct: 638 KMLINIHYA 646


>sp|NCAP_AINOV|NUCLEOPROTEIN virus

Query: 3 LINCHFP 9
L+N HFP
Sbjct: 73 LVNNHFP 79


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 1 KMLINCHFP 9
+M NCH P
Sbjct: 1392 EMCKNCHHP 1400


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 5 NCHFP 9
NCH+P
Sbjct: 997 NCHWP 1001


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5 NCHFP 9
NCH+P
Sbjct: 997 NCHWP 1001


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 5 NCHFP 9
NCH+P
Sbjct: 997 NCHWP 1001


>sp|CVC1_HHV6U|CAPSID vertex component 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 KMLINCHFPN 10
K NC+FP+
Sbjct: 294 KQKFNCNFPD 303


>sp|POLG_SPMMV|GENOME polyprotein|Sweet potato mild mottle virus

Query: 1 KMLINCHF 8
K+ NCHF
Sbjct: 80 KVQYNCHF 87


>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P

Query: 4 INCHFPN 10
I+CH PN
Sbjct: 434 ISCHVPN 440


>sp|RDRP_RBDVR|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Raspberry bushy dwarf virus (isolate

Query: 3 LINCHF 8
L++CHF
Sbjct: 148 LVSCHF 153


>sp|CVC1_HHV6Z|CAPSID vertex component 1|Human herpesvirus 6B (strain Z29)

Query: 1 KMLINCHFP 9
K NC+FP
Sbjct: 294 KQKFNCNFP 302


>sp|POL_WDSV|GAG-POL polyprotein|Walleye dermal sarcoma virus (WDSV)

Query: 2 MLINCHFP 9
+LI CH P
Sbjct: 797 ILIKCHSP 804




264|SequenceR|1325|1316|PDKDDKMLIN

>sp|YR667_MIMIV|UNCHARACTERIZED protein R667|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PDKDDKMLIN 10
PDK K LIN
Sbjct: 79 PDKPKKYLIN 88


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 1 PDKDDKMLIN 10
P KD+++LIN
Sbjct: 1235 PTKDEEVLIN 1244


>sp|AKT_MLVAT|AKT kinase-transforming protein|AKT8 murine leukemia virus

Query: 1 PDKDDKM 7
PD+DD M
Sbjct: 473 PDQDDSM 479


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1 PDKDDKMLIN 10
P KD+++L+N
Sbjct: 1320 PTKDEEILLN 1329


>sp|RDRP_APRVF|RNA-DIRECTED RNA polymerase VP2|Aedes pseudoscutellaris reovirus (isolate France)

Query: 2 DKDDKMLIN 10
DK D+++IN
Sbjct: 1051 DKSDRLVIN 1059




265|SequenceR|1330|1321|FINCQPDKDD

>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 INCQPDKDD 10
I C+PD DD
Sbjct: 54 IQCKPDNDD 62


>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 1 FINCQPDKDD 10
F NC DKDD
Sbjct: 68 FCNCLEDKDD 77


>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)

Query: 1 FINCQPDKDD 10
F++ QP++DD
Sbjct: 241 FVSTQPERDD 250


>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)

Query: 1 FINCQPDKDD 10
F++ QP++DD
Sbjct: 241 FVSTQPERDD 250


>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)

Query: 1 FINCQPDKDD 10
F++ QP++DD
Sbjct: 241 FVSTQPERDD 250


>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)

Query: 1 FINCQPDKDD 10
F++ QP++DD
Sbjct: 241 FVSTQPERDD 250


>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 INCQPDKDD 10
I C PD DD
Sbjct: 54 IQCLPDNDD 62


>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 INCQPDKDD 10
I C PD DD
Sbjct: 52 IQCLPDNDD 60


>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 INCQPDKDD 10
I C PD DD
Sbjct: 55 IQCLPDNDD 63


>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 INCQPDKDD 10
I C PD DD
Sbjct: 55 IQCLPDNDD 63


>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 INCQPDKDD 10
I C PD DD
Sbjct: 55 IQCLPDNDD 63


>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 INCQPDKDD 10
I C PD DD
Sbjct: 54 IQCLPDNDD 62


>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 INCQPDKDD 10
I C PD DD
Sbjct: 56 IQCLPDNDD 64


>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 INCQPDKDD 10
I C PD DD
Sbjct: 54 IQCLPDNDD 62


>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 INCQPDKDD 10
I C PD DD
Sbjct: 54 IQCLPDNDD 62


>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 INCQPDKDD 10
+ C PD DD
Sbjct: 55 VQCLPDNDD 63


>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann

Query: 1 FINCQPDKDD 10
F NC DKD+
Sbjct: 68 FCNCLEDKDE 77


>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 1 FINCQPDKDD 10
F NC DKD+
Sbjct: 68 FCNCLEDKDE 77


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 3 NCQPDKD 9
NC+P KD
Sbjct: 1748 NCRPSKD 1754


>sp|CAPSF_BPB03|CAPSID fiber protein|Bacillus phage B103 (Bacteriophage B103)

Query: 1 FINCQPDKD 9
F+N PD D
Sbjct: 212 FLNANPDTD 220


>sp|ENV_SIVS4|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate

Query: 4 CQPDKDD 10
C PD DD
Sbjct: 57 CLPDNDD 63


>sp|ENV_SIVM1|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate

Query: 4 CQPDKDD 10
C PD DD
Sbjct: 57 CLPDNDD 63


>sp|YR331_MIMIV|PUTATIVE zinc finger MYND domain-containing|Acanthamoeba polyphaga

Query: 1 FINCQPD 7
FINCQ D
Sbjct: 55 FINCQSD 61


>sp|NRAM_I96A1|NEURAMINIDASE A virus (strain A/Niigata/137/1996

Query: 1 FINCQPDK 8
+++C PDK
Sbjct: 121 YVSCDPDK 128


>sp|DPOL_EHV1V|DNA polymerase catalytic subunit|Equine herpesvirus 1 (strain V592)

Query: 2 INCQPD 7
INC PD
Sbjct: 338 INCTPD 343


>sp|DPOL_EHV1B|DNA polymerase catalytic subunit|Equine herpesvirus 1 (strain Ab4p)

Query: 2 INCQPD 7
INC PD
Sbjct: 338 INCTPD 343


>sp|VF205_IIV3|PUTATIVE DNA ligase 052L|Invertebrate iridescent virus 3 (IIV-3)

Query: 3 NCQPDKDD 10
+C+P++DD
Sbjct: 575 SCEPEEDD 582


>sp|REP3_MVDC3|PARA-REP C3|Milk vetch dwarf C3 alphasatellite

Query: 1 FINCQPD 7
F NC PD
Sbjct: 264 FANCMPD 270


>sp|NS1A_TASV1|NON-STRUCTURAL polyprotein 1A|Turkey astrovirus 1 (TAstV-1)

Query: 2 INCQPDKDD 10
+ CQP++++
Sbjct: 933 VECQPEREE 941


>sp|VG85_BPNF|HEAD fiber protein|Bacillus phage Nf (Bacteriophage Nf)

Query: 1 FINCQPDKD 9
F+N PD D
Sbjct: 186 FLNANPDTD 194


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 2 INCQPDKD 9
+ CQ DKD
Sbjct: 3687 LQCQSDKD 3694


>sp|NS1AB_TASV1|NON-STRUCTURAL polyprotein 1AB|Turkey astrovirus 1 (TAstV-1)

Query: 2 INCQPDKDD 10
+ CQP++++
Sbjct: 933 VECQPEREE 941


>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P

Query: 2 INCQPDKDD 10
+NCQ DD
Sbjct: 155 VNCQRQDDD 163


>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32

Query: 3 NCQPDKDD 10
NC PD D
Sbjct: 238 NCDPDGTD 245


>sp|POLG_DWV|GENOME polyprotein|Deformed wing virus (DWV)

Query: 2 INCQPDKD 9
+ C PD+D
Sbjct: 530 VGCAPDED 537


>sp|KP6T_UMV6|KP6 killer toxin|Ustilago maydis P6 virus (UmV6)

Query: 3 NCQPD 7
NCQPD
Sbjct: 211 NCQPD 215


>sp|YO23_BPHC1|PUTATIVE tail sheath protein|Haemophilus phage HP1 (strain HP1c1)

Query: 4 CQPDKDD 10
C P KDD
Sbjct: 330 CMPPKDD 336


>sp|TAT_SIVSP|PROTEIN Tat|Simian immunodeficiency virus (isolate PBj14/BCL-3)

Query: 3 NCQPDKD 9
NCQP K+
Sbjct: 105 NCQPKKE 111




266|SequenceR|1335|1326|PLDQGFINCQ

>sp|OBP_BPT5|PUTATIVE replication origin binding protein|Escherichia phage T5

Query: 1 PLDQGFI 7
PLD GFI
Sbjct: 145 PLDAGFI 151


>sp|Y252_SIRV1|UNCHARACTERIZED protein 252|Sulfolobus islandicus rod-shaped virus 1

Query: 2 LDQGFINC 9
LD+ +INC
Sbjct: 29 LDKNYINC 36


>sp|SPLR_NPVAC|SPHEROIDIN-LIKE protein|Autographa californica nuclear polyhedrosis virus

Query: 1 PLDQGFINC 9
P+ +GF NC
Sbjct: 236 PVGEGFYNC 244


>sp|SPLR_NPVOP|SPHEROIDIN-LIKE protein|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 1 PLDQGFINC 9
P+ +GF NC
Sbjct: 235 PVGEGFYNC 243


>sp|TSP_BPBMU|TAIL sheath protein|Burkholderia phage BcepMu (isolate -/United

Query: 1 PLDQGFIN 8
P+DQG I+
Sbjct: 396 PIDQGLID 403


>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)

Query: 1 PLDQGFINC 9
P++Q INC
Sbjct: 2023 PIEQVLINC 2031


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 1 PLDQGFINC 9
P++Q INC
Sbjct: 2023 PIEQVLINC 2031


>sp|SPIN_CBEPV|SPINDOLIN biennis entomopoxvirus (CbEPV)

Query: 1 PLDQGFINC 9
P+ +GF NC
Sbjct: 241 PVGEGFYNC 249


>sp|FIBC_BPT5|STRAIGHT fiber protein pb4|Escherichia phage T5 (Enterobacteria phage

Query: 1 PLDQGFIN 8
PLD F+N
Sbjct: 322 PLDNSFVN 329


>sp|RDRP_BYDVR|PUTATIVE RNA-directed RNA polymerase|Barley yellow dwarf virus (isolate

Query: 4 QGFINC 9
+GFINC
Sbjct: 156 RGFINC 161


>sp|RDRP_BYDVP|PUTATIVE RNA-directed RNA polymerase|Barley yellow dwarf virus (isolate

Query: 4 QGFINC 9
+GFINC
Sbjct: 156 RGFINC 161


>sp|RDRP_BYDVM|PUTATIVE RNA-directed RNA polymerase|Barley yellow dwarf virus (isolate

Query: 4 QGFINC 9
+GFINC
Sbjct: 156 RGFINC 161


>sp|POLG_PVYHU|GENOME polyprotein|Potato virus Y (strain Hungarian)

Query: 1 PLDQGFINC 9
P+D G ++C
Sbjct: 2354 PIDVGIVDC 2362


>sp|SPIN_HAEPV|SPINDOLIN armigera entomopoxvirus (HaEPV)

Query: 1 PLDQGFINC 9
P+ +GF NC
Sbjct: 240 PVGEGFYNC 248


>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PLDQGF 6
PLD+GF
Sbjct: 702 PLDEGF 707


>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PLDQGF 6
PLD+GF
Sbjct: 710 PLDEGF 715


>sp|Y181_AFV2P|UNCHARACTERIZED protein ORF181|Acidianus filamentous virus 2 (isolate

Query: 3 DQGFINC 9
D+GF NC
Sbjct: 153 DKGFENC 159


>sp|GP_INSV|ENVELOPMENT polyprotein|Impatiens necrotic spot virus (INSV)

Query: 1 PLDQGFI 7
PLD GF+
Sbjct: 531 PLDNGFL 537


>sp|VF177_ASFWA|PROTEIN I177L|African swine fever virus (isolate

Query: 3 DQGFIN 8
DQGF+N
Sbjct: 6 DQGFLN 11


>sp|VF177_ASFB7|PROTEIN I177L|African swine fever virus (strain

Query: 3 DQGFIN 8
DQGF+N
Sbjct: 6 DQGFLN 11


>sp|VF177_ASFP4|PROTEIN I177L|African swine fever virus (isolate

Query: 3 DQGFIN 8
DQGF+N
Sbjct: 6 DQGFLN 11


>sp|VF177_ASFK5|PROTEIN I177L|African swine fever virus (isolate

Query: 3 DQGFINCQ 10
DQGF+N
Sbjct: 6 DQGFLNIT 13




267|SequenceR|1340|1331|RQPVAPLDQG

>sp|GLYCO_COCAV|GLYCOPROTEIN virus (COCV)

Query: 1 RQPVAPLD 8
+QPV+P+D
Sbjct: 311 KQPVSPVD 318


>sp|KITH_AHV1W|THYMIDINE kinase|Alcelaphine herpesvirus 1 (strain WC11)

Query: 2 QPVAPLDQ 9
QPV PLD+
Sbjct: 333 QPVGPLDK 340


>sp|NS2_BANNV|NON-STRUCTURAL protein 2|Banna virus (BAV)

Query: 5 APLDQG 10
APLDQG
Sbjct: 394 APLDQG 399


>sp|KITH_ALHV1|THYMIDINE kinase|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 QPVAPLDQ 9
QPV PLD+
Sbjct: 335 QPVGPLDK 342


>sp|GH_SUHVR|ENVELOPE glycoprotein H|Suid herpesvirus 1 (strain Rice)

Query: 1 RQPVAPLDQ 9
R PVAP DQ
Sbjct: 329 RVPVAPADQ 337


>sp|GH_SUHVN|ENVELOPE glycoprotein H|Suid herpesvirus 1 (strain NIA-3)

Query: 1 RQPVAPLDQ 9
R PVAP DQ
Sbjct: 329 RVPVAPADQ 337


>sp|GH_SUHVK|ENVELOPE glycoprotein H|Suid herpesvirus 1 (strain Kaplan)

Query: 1 RQPVAPLDQ 9
R PVAP DQ
Sbjct: 329 RVPVAPADQ 337


>sp|LMBD2_REOVL|OUTER capsid protein lambda-2|Reovirus type 1 (strain Lang)

Query: 2 QPVAPLDQ 9
QPVA LDQ
Sbjct: 274 QPVARLDQ 281


>sp|P78_NPVAC|PROTEIN P78/83|Autographa californica nuclear polyhedrosis virus

Query: 2 QPVAPLD 8
QP APLD
Sbjct: 219 QPAAPLD 225




268|SequenceR|1345|1336|FNFEKRQPVA

>sp|VP39_BPAPS|PUTATIVE protein p39|Acyrthosiphon pisum secondary endosymbiont phage

Query: 3 FEKRQPVA 10
FE+R PVA
Sbjct: 3 FERRNPVA 10


>sp|MOVP_CLBVS|PUTATIVE movement protein|Citrus leaf blotch virus (isolate

Query: 1 FNFEKRQPVA 10
F F K+QP A
Sbjct: 127 FKFTKKQPFA 136


>sp|PRO_BPMU|PROTEASE I|Escherichia phage Mu (Bacteriophage Mu)

Query: 3 FEKRQPVA 10
EK+QP+A
Sbjct: 304 LEKKQPIA 311




269|SequenceR|1350|1341|SGAEPFNFEK

>sp|VP1_RRSVT|STRUCTURAL protein VP1|Rice ragged stunt virus (isolate

Query: 1 SGAEPFNFE 9
+G +P+NFE
Sbjct: 126 TGIQPYNFE 134


>sp|MCP_PPV01|MAJOR capsid protein|Phaeocystis pouchetii virus (PpV01)

Query: 2 GAEPFNF 8
GA+PFN+
Sbjct: 327 GAQPFNY 333


>sp|MCP_CEV01|MAJOR capsid protein|Chrysochromulina ericina virus (CeV01)

Query: 2 GAEPFNF 8
GA+PFN+
Sbjct: 358 GAQPFNY 364


>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)

Query: 1 SGAEPFNFE 9
SGA PF FE
Sbjct: 496 SGAHPFFFE 504


>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)

Query: 1 SGAEPFNFEK 10
SG PF+F K
Sbjct: 547 SGTCPFSFSK 556


>sp|NCAP_INCCA|NUCLEOPROTEIN C virus (strain C/California/1978)

Query: 1 SGAEPFNFE 9
SGA PF FE
Sbjct: 496 SGAHPFFFE 504


>sp|NCAP_INCAA|NUCLEOPROTEIN C virus (strain C/Ann

Query: 1 SGAEPFNFE 9
SGA PF FE
Sbjct: 496 SGAHPFFFE 504




270|SequenceR|1355|1346|LAGSSSGAEP

>sp|MCAPS_TYYVF|READTHROUGH protein P3-RTD|Turnip yellows virus (isolate FL-1)

Query: 1 LAGSSSGA 8
LAGSSSGA
Sbjct: 74 LAGSSSGA 81


>sp|CAPSD_TYYVF|MAJOR capsid protein|Turnip yellows virus (isolate FL-1)

Query: 1 LAGSSSGA 8
LAGSSSGA
Sbjct: 74 LAGSSSGA 81




271|SequenceR|1360|1351|VASPFLAGSS

>sp|YR839_MIMIV|UNCHARACTERIZED protein R839|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 SPFLAGSS 10
SPF+ GSS
Sbjct: 423 SPFINGSS 430


>sp|DNBI_SUHV|MAJOR DNA-binding protein|Suid herpesvirus 1 (SuHV-1) (Pseudorabies

Query: 1 VASPFLAGS 9
VA+P+LAG+
Sbjct: 409 VAAPYLAGN 417


>sp|POL_RSVSB|GAG-POL polyprotein|Rous sarcoma virus subgroup B

Query: 2 ASPFLAGSS 10
ASP AGSS
Sbjct: 1561 ASPLFAGSS 1569


>sp|Y554_AFV2P|UNCHARACTERIZED protein ORF554|Acidianus filamentous virus 2 (isolate

Query: 1 VASPFLAG 8
+ SPF+AG
Sbjct: 296 IGSPFIAG 303




272|SequenceR|1365|1356|LEPPSVASPF

>sp|VP3_EHDVA|CORE protein VP3|Epizootic hemorrhagic disease virus 2

Query: 2 EPPSVASP 9
EPP A+P
Sbjct: 3 EPPDAATP 10


>sp|CVC1_ELHVK|CAPSID vertex component 1|Elephantid herpesvirus 1 (isolate Asian

Query: 1 LEPPSV 6
LEPPSV
Sbjct: 192 LEPPSV 197




273|SequenceR|1370|1361|HLRQRLEPPS

>sp|GH_EHV4|ENVELOPE glycoprotein H|Equine herpesvirus 4 (strain 1942)

Query: 3 RQRLEPP 9
R+RLEPP
Sbjct: 292 RRRLEPP 298


>sp|RDRP_ISAV8|RNA-DIRECTED RNA polymerase catalytic subunit|Infectious salmon anemia virus

Query: 1 HLRQRLE 7
H RQRLE
Sbjct: 442 HARQRLE 448


>sp|GH_EHV1B|ENVELOPE glycoprotein H|Equine herpesvirus 1 (strain Ab4p)

Query: 3 RQRLEPP 9
R RLEPP
Sbjct: 285 RLRLEPP 291


>sp|GH_EHV1|ENVELOPE glycoprotein H|Equine herpesvirus 1 (strain HVS25A)

Query: 3 RQRLEPP 9
R RLEPP
Sbjct: 285 RLRLEPP 291


>sp|RL8A_HCMVM|PROTEIN RL8A|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 HLRQRLEPPS 10
HLRQ L P S
Sbjct: 5 HLRQALSPTS 14


>sp|POLG_BVY3|GENOME polyprotein|Blackberry virus Y (isolate Blackberry

Query: 1 HLRQRLEP 8
H+R+R++P
Sbjct: 2216 HMRERIQP 2223


>sp|BRLF1_BHV4D|PUTATIVE transcription activator BRLF1 homolog|Bovine herpesvirus 4 (strain

Query: 3 RQRLEPP 9
+QR+EPP
Sbjct: 457 KQRMEPP 463


>sp|GP3_PRRSL|GLYCOPROTEIN 3|Porcine reproductive and respiratory syndrome

Query: 3 RQRLEP 8
RQRLEP
Sbjct: 64 RQRLEP 69


>sp|GP3_PRRSS|GLYCOPROTEIN 3|Porcine reproductive and respiratory syndrome

Query: 3 RQRLEP 8
RQRLEP
Sbjct: 64 RQRLEP 69




274|SequenceR|1375|1366|LLEVGHLRQR

>sp|TERL_BPSPP|TERMINASE, large subunit|Bacillus phage SPP1 (Bacteriophage SPP1)

Query: 1 LLEVGHL 7
+LEVGHL
Sbjct: 82 MLEVGHL 88


>sp|034R_FRG3G|UNCHARACTERIZED protein 034R|Frog virus 3 (isolate Goorha)

Query: 2 LEVGHLRQR 10
+ GHLR+R
Sbjct: 1 MSAGHLRKR 9




275|SequenceR|1380|1371|KNFIKLLEVG

>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 NFIKLLEVG 10
NF++ LE+G
Sbjct: 78 NFVRFLELG 86


>sp|YR257_MIMIV|UNCHARACTERIZED protein R257|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 KNFIKLLEVG 10
KN IK+L++G
Sbjct: 118 KNVIKILDIG 127


>sp|Y243_ABVP|UNCHARACTERIZED protein ORF243|Acidianus bottle-shaped virus (isolate

Query: 1 KNFIKLLEV 9
KNF+ LLE+
Sbjct: 27 KNFLTLLEI 35


>sp|AGNO_POVBO|BOVINE agnoprotein|Bovine polyomavirus (BPyV) (Bos taurus

Query: 2 NFIKLLEVG 10
+F+K+LE G
Sbjct: 63 DFLKMLEAG 71


>sp|Y167_ABVP|UNCHARACTERIZED protein ORF167|Acidianus bottle-shaped virus (isolate

Query: 2 NFIKLLEVG 10
NFI+ +EVG
Sbjct: 70 NFIRSVEVG 78




276|SequenceR|1385|1376|GLKQNKNFIK

>sp|RPOB_NPVOP|PROBABLE DNA-directed RNA polymerase subunit|Orgyia pseudotsugata

Query: 2 LKQNKNFIK 10
LKQ K+F+K
Sbjct: 349 LKQKKDFVK 357


>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 LKQNKNFI 9
LKQNK +I
Sbjct: 164 LKQNKTYI 171


>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 LKQNKNFI 9
LKQNK +I
Sbjct: 164 LKQNKTYI 171


>sp|VP39_NPVOP|MAJOR capsid protein|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 2 LKQNKNFI 9
LK N+NFI
Sbjct: 134 LKNNENFI 141




277|SequenceR|1390|1381|STSSSGLKQN

***** No hits found ******


278|SequenceR|1395|1386|SLHPISTSSS

>sp|VCYCL_HHV8P|VIRAL cyclin homolog|Human herpesvirus 8 type P

Query: 1 SLHPISTSS 9
SL PISTSS
Sbjct: 109 SLTPISTSS 117


>sp|L_SENDO|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Ohita) (SeV)

Query: 1 SLHPISTSSS 10
SLHP+S S
Sbjct: 1996 SLHPLSKEDS 2005


>sp|L_SENDA|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Hamamatsu) (SeV)

Query: 1 SLHPISTSSS 10
SLHP+S S
Sbjct: 1996 SLHPLSKEDS 2005




279|SequenceR|1400|1391|KTPPSSLHPI

>sp|CAPSP_BPKVM|CAPSID vertex protein|Vibrio phage KVP40 (isolate Vibrio

Query: 2 TPPSSLHPI 10
T P S HP+
Sbjct: 244 TDPKSFHPV 252


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 5 SSLHPI 10
SSLHPI
Sbjct: 1447 SSLHPI 1452


>sp|NPH2_MYXVL|RNA helicase NPH-II|Myxoma virus (strain Lausanne) (MYXV)

Query: 1 KTPPSSLHP 9
K P SLHP
Sbjct: 160 KVPLKSLHP 168


>sp|POLG_FCVUR|GENOME polyprotein|Feline calicivirus (strain Cat/United States/Urbana/1960)

Query: 1 KTPPSSLHP 9
KTPP S+ P
Sbjct: 1674 KTPPKSIDP 1682


>sp|VL96_IRV1|PUTATIVE ubiquitin thioesterase L96|Tipula iridescent virus (TIV) (Insect

Query: 1 KTPPSSLHP 9
+TPPSS+ P
Sbjct: 470 ETPPSSVRP 478


>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain

Query: 3 PPSSLHPI 10
PP+SL P+
Sbjct: 213 PPASLRPL 220


>sp|MT_POVMC|MIDDLE T antigen|Murine polyomavirus (strain Crawford small-plaque)

Query: 1 KTPPSSLHP 9
+TPP L+P
Sbjct: 290 RTPPELLYP 298


>sp|MT_POVMA|MIDDLE T antigen|Murine polyomavirus (strain A2) (MPyV)

Query: 1 KTPPSSLHP 9
+TPP L+P
Sbjct: 290 RTPPELLYP 298


>sp|MT_POVM3|MIDDLE T antigen|Murine polyomavirus (strain A3) (MPyV)

Query: 1 KTPPSSLHP 9
+TPP L+P
Sbjct: 290 RTPPELLYP 298


>sp|MT_POVM1|MIDDLE T antigen|Mus musculus polyomavirus 1 (MPyV)

Query: 1 KTPPSSLHP 9
+TPP L+P
Sbjct: 290 RTPPELLYP 298


>sp|MT_POVBG|MIDDLE T antigen|Murine polyomavirus (strain BG) (MPyV)

Query: 1 KTPPSSLHP 9
+TPP L+P
Sbjct: 290 RTPPELLYP 298




280|SequenceR|1405|1396|TSVFFKTPPS

>sp|FIBER_BPSFV|TAIL spike protein|Shigella phage Sf6 (Shigella flexneri

Query: 1 TSVFFKTPPS 10
T ++F+TP S
Sbjct: 434 TGIYFRTPTS 443


>sp|POLG_TMEVD|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 2 SVFFKTPP 9
S FF+TPP
Sbjct: 1172 SSFFRTPP 1179


>sp|POLG_TMEVG|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 2 SVFFKTPP 9
S FF+TPP
Sbjct: 1174 SSFFRTPP 1181


>sp|POLG_TMEVB|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 2 SVFFKTPP 9
S FF+TPP
Sbjct: 1174 SSFFRTPP 1181


>sp|VF075_IIV3|UNCHARACTERIZED protein 088R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 TSVFFKTP 8
TSVF KTP
Sbjct: 126 TSVFNKTP 133




281|SequenceR|1410|1401|SPQSPTSVFF

>sp|TERL_LAMBD|TERMINASE, large subunit|Escherichia phage lambda (Bacteriophage lambda)

Query: 1 SPQSPTSVFF 10
+P P+SVF+
Sbjct: 263 TPDDPSSVFY 272


>sp|PP71_HCMVA|PROTEIN pp71|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 SPQSPTSVFF 10
SP PTSVF
Sbjct: 245 SPHPPTSVFL 254


>sp|PP71_HCMVM|PROTEIN pp71|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 SPQSPTSVFF 10
SP PTSVF
Sbjct: 245 SPHPPTSVFL 254


>sp|CEP2_SHV21|CYTOPLASMIC envelopment protein 2|Saimiriine herpesvirus 2 (strain 11)

Query: 1 SPQSPTSV 8
SPQ+PT+V
Sbjct: 274 SPQTPTTV 281


>sp|VP9_MPRVN|PUTATIVE outer capsid protein VP9|Micromonas pusilla reovirus (isolate

Query: 1 SPQSPTSV 8
SPQ+PT V
Sbjct: 235 SPQTPTVV 242


>sp|POLG_SVV1|GENOME polyprotein|Seneca Valley virus (isolate -/United

Query: 2 PQSPTSVFF 10
PQSP +FF
Sbjct: 643 PQSPCILFF 651




282|SequenceR|1415|1406|LHSKCSPQSP

>sp|Y026_NPVAC|UNCHARACTERIZED 14.6 kDa protein in|Autographa californica nuclear polyhedrosis

Query: 2 HSKCSP 7
HSKC+P
Sbjct: 29 HSKCAP 34


>sp|POL2_CNSV|RNA2 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 5 CSPQSP 10
CSP SP
Sbjct: 991 CSPMSP 996


>sp|Y057_HVAVE|UNCHARACTERIZED protein ORF57|Heliothis virescens ascovirus 3e (HvAV-3e)

Query: 1 LHSKCSPQ 8
LH CSPQ
Sbjct: 60 LHRFCSPQ 67


>sp|VE4_HPV42|PROTEIN E4|Human papillomavirus 42

Query: 2 HSKCSPQSP 10
HS CS Q+P
Sbjct: 72 HSTCSTQTP 80




283|SequenceR|1420|1411|KTGTELHSKC

>sp|RDRP_ROTTU|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Monkey/United

Query: 1 KTGTELHSKC 10
K E HSKC
Sbjct: 36 KRCIEFHSKC 45


>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 KTGTELHSKC 10
K E HSKC
Sbjct: 36 KRCIEFHSKC 45


>sp|RDRP_ROTW3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United

Query: 5 ELHSKC 10
E HSKC
Sbjct: 40 EFHSKC 45


>sp|RDRP_ROTSP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/SA11-Patton/G3P[X]) (RV-A)

Query: 5 ELHSKC 10
E HSKC
Sbjct: 40 EFHSKC 45


>sp|RDRP_ROTSH|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Monkey/South

Query: 5 ELHSKC 10
E HSKC
Sbjct: 40 EFHSKC 45


>sp|RDRP_ROTS1|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/SA11-Both/G3P5B[2]) (RV-A)

Query: 5 ELHSKC 10
E HSKC
Sbjct: 40 EFHSKC 45


>sp|RDRP_ROTRF|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 5 ELHSKC 10
E HSKC
Sbjct: 40 EFHSKC 45


>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 5 ELHSKC 10
E HSKC
Sbjct: 40 EFHSKC 45


>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 5 ELHSKC 10
E HSKC
Sbjct: 40 EFHSKC 45


>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United

Query: 5 ELHSKC 10
E HSKC
Sbjct: 40 EFHSKC 45


>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 5 ELHSKC 10
E HSKC
Sbjct: 40 EFHSKC 45


>sp|RDRP_ROTBU|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United

Query: 5 ELHSKC 10
E HSKC
Sbjct: 40 EFHSKC 45


>sp|RDRP_ROTBN|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United

Query: 5 ELHSKC 10
E HSKC
Sbjct: 40 EFHSKC 45


>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate

Query: 5 ELHSKC 10
E HSKC
Sbjct: 40 EFHSKC 45


>sp|UNG_EHV2|URACIL-DNA glycosylase|Equine herpesvirus 2 (strain 86/87)

Query: 5 ELHSKC 10
ELH KC
Sbjct: 243 ELHGKC 248


>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)

Query: 4 TELHSK 9
TELHSK
Sbjct: 438 TELHSK 443


>sp|TOP2_IIV6|DNA topoisomerase 2|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 KTGTELHSKC 10
K GT L KC
Sbjct: 433 KAGTTLSEKC 442


>sp|CAPS3_MIMIV|PROBABLE capsid protein 3|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 TGTELHSK 9
TGT +H K
Sbjct: 639 TGTSIHDK 646




284|SequenceR|1425|1416|VTEQDKTGTE

***** No hits found ******


285|SequenceR|1430|1421|TAKSCVTEQD

>sp|CAPSD_CCMV|CAPSID protein|Cowpea chlorotic mottle virus (CCMV)

Query: 1 TAKSCVTE 8
T KSCVTE
Sbjct: 104 TVKSCVTE 111


>sp|VL1_PAPVE|MAJOR capsid protein L1|European elk papillomavirus (EEPV)

Query: 1 TAKSCVTEQ 9
TA+ CVT++
Sbjct: 169 TARPCVTDR 177


>sp|VL1_BPV2|MAJOR capsid protein L1|Bos taurus papillomavirus 2 (Bovine

Query: 1 TAKSCVTEQ 9
TA+ CVT++
Sbjct: 167 TARPCVTDR 175


>sp|VL1_BPV1|MAJOR capsid protein L1|Bovine papillomavirus type 1

Query: 1 TAKSCVTEQ 9
TA+ CVT++
Sbjct: 167 TARPCVTDR 175




286|SequenceR|1435|1426|TNDGETAKSC

>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain

Query: 2 NDGETAKSC 10
NDG KSC
Sbjct: 231 NDGRNRKSC 239


>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 DGETAKSC 10
+G TAK+C
Sbjct: 396 EGHTAKNC 403


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 3 DGETAKSC 10
DG+T K C
Sbjct: 926 DGDTLKEC 933


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 3 DGETAKSC 10
DG+T K C
Sbjct: 930 DGDTLKEC 937


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 3 DGETAKSC 10
DG+T K C
Sbjct: 930 DGDTLKEC 937




287|SequenceR|1440|1431|FAGFETNDGE

>sp|POLG_RGMVD|GENOME polyprotein|Ryegrass mosaic virus (isolate Denmark/Danish)

Query: 2 AGFETNDGE 10
AGF T+DGE
Sbjct: 1965 AGFPTHDGE 1973


>sp|NTP1_RFVKA|NUCLEOSIDE triphosphatase I|Rabbit fibroma virus (strain Kasza)

Query: 1 FAGFETNDG 9
+ GF+T+DG
Sbjct: 593 YKGFKTDDG 601


>sp|NTP1_MYXVL|NUCLEOSIDE triphosphatase I|Myxoma virus (strain Lausanne) (MYXV)

Query: 1 FAGFETNDG 9
+ GF+T+DG
Sbjct: 593 YKGFKTDDG 601


>sp|ENV_SIVVG|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.vervet

Query: 1 FAGFETN 7
+AGF+TN
Sbjct: 252 YAGFKTN 258


>sp|NTP1_YMTV5|NUCLEOSIDE triphosphatase I|Yaba monkey tumor virus (strain

Query: 3 GFETNDGE 10
GF+T+DG+
Sbjct: 595 GFKTSDGK 602




288|SequenceR|1445|1436|DRHGVFAGFE

>sp|ENV_RSVSB|ENVELOPE glycoprotein gp95|Rous sarcoma virus subgroup B

Query: 1 DRHGVFAGFE 10
DRH +F G E
Sbjct: 241 DRHNLFMGSE 250


>sp|ENV_RSVP|ENVELOPE glycoprotein gp95|Rous sarcoma virus subgroup C

Query: 1 DRHGVFAGFE 10
DRH +F G E
Sbjct: 237 DRHNLFMGSE 246


>sp|ENV_ALVA|ENVELOPE glycoprotein gp95|Avian leukosis virus subgroup A

Query: 1 DRHGVFAGFE 10
DRH +F G E
Sbjct: 234 DRHNLFMGSE 243


>sp|RDRP_AQRVG|RNA-DIRECTED RNA polymerase VP2|Aquareovirus G (isolate American grass

Query: 1 DRHGVFAGF 9
D +GV+AG+
Sbjct: 945 DSYGVYAGY 953


>sp|DPOL_GPCMV|DNA polymerase|Guinea pig cytomegalovirus (strain 22122)

Query: 2 RHGVFAGF 9
RHGV +GF
Sbjct: 928 RHGVPSGF 935


>sp|Y061_OSHVF|UNCHARACTERIZED protein ORF61|Ostreid herpesvirus 1 (isolate France)

Query: 1 DRHGVFA 7
DRHG F+
Sbjct: 476 DRHGFFS 482


>sp|YL145_MIMIV|UNCHARACTERIZED protein L145|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 RHGVFAGF 9
RH +F GF
Sbjct: 159 RHDIFEGF 166


>sp|VA203_VACCW|ANKYRIN repeat protein VACWR203|Vaccinia virus (strain Western Reserve)

Query: 2 RHGVFAGF 9
+H VF GF
Sbjct: 11 KHSVFKGF 18


>sp|VG17_ICHVA|UNCHARACTERIZED protein ORF17|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 HGVFAGFE 10
HGV GFE
Sbjct: 257 HGVRPGFE 264


>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)

Query: 3 HGVFAG 8
HGVFAG
Sbjct: 690 HGVFAG 695


>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)

Query: 3 HGVFAG 8
HGVFAG
Sbjct: 690 HGVFAG 695


>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)

Query: 3 HGVFAG 8
HGVFAG
Sbjct: 690 HGVFAG 695


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 3 HGVFAG 8
HGVFAG
Sbjct: 690 HGVFAG 695


>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 3 HGVFAG 8
HGVFAG
Sbjct: 690 HGVFAG 695


>sp|VG67_BPML5|GENE 67 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 1 DRHGVFAGFE 10
DRH GFE
Sbjct: 14 DRHDSCCGFE 23




289|SequenceR|1450|1441|QLDMSDRHGV

>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1

Query: 2 LDMSDRHGV 10
++ SDRHG+
Sbjct: 508 MNASDRHGI 516


>sp|POLG_FMDVO|GENOME polyprotein|Foot-and-mouth disease virus serotype O

Query: 1 QLDMSDRHG 9
Q DMS +HG
Sbjct: 975 QEDMSTKHG 983


>sp|POLG_FMDVA|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 QLDMSDRHG 9
Q DMS +HG
Sbjct: 976 QEDMSTKHG 984


>sp|POLG_FMDVP|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 QLDMSDRHG 9
Q DMS +HG
Sbjct: 975 QEDMSTKHG 983


>sp|POLG_FMDA1|GENOME polyprotein|Foot-and-mouth disease virus serotype Asia-1

Query: 1 QLDMSDRHG 9
Q DMS +HG
Sbjct: 972 QEDMSTKHG 980


>sp|POLG_FMDVI|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 QLDMSDRHG 9
Q DMS +HG
Sbjct: 971 QEDMSTKHG 979


>sp|POLG_FMDV1|GENOME polyprotein|Foot-and-mouth disease virus (strain A10/Holland/1961

Query: 1 QLDMSDRHG 9
Q DMS +HG
Sbjct: 975 QEDMSTKHG 983


>sp|POLG_FMDVZ|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 QLDMSDRHG 9
Q DMS +HG
Sbjct: 976 QEDMSTKHG 984


>sp|POLG_FMDVT|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 QLDMSDRHG 9
Q DMS +HG
Sbjct: 970 QEDMSTKHG 978


>sp|POLG_FMDVS|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 QLDMSDRHG 9
Q DMS +HG
Sbjct: 970 QEDMSTKHG 978


>sp|POLG_FMDVC|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 QLDMSDRHG 9
Q DMS +HG
Sbjct: 976 QEDMSTKHG 984


>sp|POLG_FMDV5|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 QLDMSDRHG 9
Q DMS +HG
Sbjct: 975 QEDMSTKHG 983


>sp|POLG_FMDS2|GENOME polyprotein|Foot-and-mouth disease virus serotype SAT-2

Query: 1 QLDMSDRHG 9
Q DMS +HG
Sbjct: 979 QNDMSTKHG 987


>sp|FIBER_BPK1E|TAIL spike protein|Escherichia phage K1E (Bacteriophage K1E)

Query: 5 SDRHGV 10
SDRHGV
Sbjct: 137 SDRHGV 142


>sp|FIBER_BPK1F|TAIL spike protein|Escherichia phage K1F (Bacteriophage K1F)

Query: 5 SDRHGV 10
SDRHGV
Sbjct: 347 SDRHGV 352


>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain

Query: 2 LDMSDRH 8
LD++DRH
Sbjct: 1018 LDVTDRH 1024


>sp|YL782_MIMIV|UNCHARACTERIZED protein L782|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 LDMSDRHG 9
LD+ +RHG
Sbjct: 37 LDLQNRHG 44




290|SequenceR|1455|1446|TEKFRQLDMS

>sp|RDRP_FXMV|RNA replication protein|Foxtail mosaic virus

Query: 1 TEKFRQLDMS 10
T KFR DM
Sbjct: 260 TPKFRSFDMP 269


>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)

Query: 1 TEKFRQLDM 9
TEK R+LD+
Sbjct: 1668 TEKTRELDV 1676


>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)

Query: 1 TEKFRQLDM 9
TEK R+LD+
Sbjct: 1698 TEKARELDV 1706


>sp|RPOLV_BPN4|VIRION DNA-directed RNA polymerase|Enterobacteria phage N4 (Bacteriophage

Query: 2 EKFRQLDMS 10
E+FR LD+S
Sbjct: 2264 EQFRSLDIS 2272




291|SequenceR|1460|1451|KIKNSTEKFR

>sp|SPIKE_IBVM|SPIKE glycoprotein|Avian infectious bronchitis virus (strain

Query: 1 KIKNSTEKFR 10
KI N T +FR
Sbjct: 527 KITNGTRRFR 536


>sp|SPIKE_IBVK|SPIKE glycoprotein|Avian infectious bronchitis virus (strain

Query: 1 KIKNSTEKFR 10
KI N T +FR
Sbjct: 527 KITNGTRRFR 536


>sp|SPIKE_IBVB|SPIKE glycoprotein|Avian infectious bronchitis virus (strain

Query: 1 KIKNSTEKFR 10
KI N T +FR
Sbjct: 527 KITNGTRRFR 536


>sp|YR892_MIMIV|UNCHARACTERIZED protein R892|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 KNSTEKF 9
KNSTEKF
Sbjct: 137 KNSTEKF 143


>sp|VPK2_SWPVK|SERINE/THREONINE-PROTEIN kinase 2|Swinepox virus (strain Kasza) (SWPV)

Query: 3 KNSTEKFR 10
KN+ EKFR
Sbjct: 403 KNTCEKFR 410




292|SequenceR|1465|1456|NNSLIKIKNS

>sp|MCP_IRV22|MAJOR capsid protein|Simulium iridescent virus (IIV-22) (Insect

Query: 1 NNSLIKIKNS 10
NN++++I+NS
Sbjct: 445 NNNIVRIENS 454




293|SequenceR|1470|1461|NESTNNNSLI

***** No hits found ******


294|SequenceR|1475|1466|VRKLTNESTN

***** No hits found ******


295|SequenceR|1480|1471|GALSSVRKLT

***** No hits found ******


296|SequenceR|1485|1476|HCDTFGALSS

>sp|RDRP_SBWMN|REPLICASE large subunit|Soil-borne wheat mosaic virus (strain

Query: 1 HCDTFGA 7
+CDT+G+
Sbjct: 1648 NCDTYGS 1654


>sp|RDRP_PMTVS|REPLICASE large subunit|Potato mop-top virus (isolate Potato/Sweden/Sw)

Query: 1 HCDTFGA 7
+CDT+G+
Sbjct: 1632 NCDTYGS 1638


>sp|RDRP_PCV87|REPLICASE large subunit|Peanut clump virus (isolate 87/TGTA2)

Query: 1 HCDTFGA 7
+CDT+G+
Sbjct: 1473 NCDTYGS 1479


>sp|RDRP_BSMV|RNA-DIRECTED RNA polymerase|Barley stripe mosaic virus (BSMV)

Query: 1 HCDTFGA 7
+CDT+G+
Sbjct: 591 NCDTYGS 597


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 1 HCDTFGAL 8
HCD GA+
Sbjct: 1903 HCDMEGAI 1910


>sp|SPIKE_BC133|SPIKE glycoprotein|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 3 DTFGALSS 10
+TFGA+SS
Sbjct: 1039 NTFGAISS 1046


>sp|SPIKE_BCHK5|SPIKE glycoprotein|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 3 DTFGALSS 10
+TFGA+SS
Sbjct: 1039 NTFGAISS 1046


>sp|SPIKE_BCHK4|SPIKE glycoprotein|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 3 DTFGALSS 10
+TFGA+SS
Sbjct: 1041 NTFGAISS 1048




297|SequenceR|1490|1481|PISTRHCDTF

>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 2 ISTRHCDT 9
+ RHCDT
Sbjct: 1447 VKVRHCDT 1454


>sp|DPOL_BPSP1|DNA polymerase|Bacillus phage SP01 (Bacteriophage SP01)

Query: 5 RHCDTF 10
R+CDTF
Sbjct: 185 RYCDTF 190


>sp|RDRP_IBDVA|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus

Query: 2 ISTRHCDT 9
+ TRHC T
Sbjct: 123 VPTRHCTT 130


>sp|YL613_MIMIV|UNCHARACTERIZED protein L613|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 ISTRHCDTF 10
I HC+TF
Sbjct: 168 IPRHHCETF 176


>sp|POL2_BRAV|RNA2 polyprotein|Blackcurrant reversion association virus (BRAV)

Query: 1 PISTRHCD 8
P+ST +CD
Sbjct: 675 PLSTVYCD 682


>sp|POL_JSRV|GAG-PRO-POL polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 3 STRHC 7
STRHC
Sbjct: 1544 STRHC 1548




298|SequenceR|1495|1486|QKSHVPISTR

>sp|RDRP_SCV20|RNA-DIRECTED RNA polymerase|Saccharomyces 20S RNA narnavirus (ScNV-20S)

Query: 2 KSHVPISTR 10
+SH+P+ TR
Sbjct: 532 RSHIPVVTR 540


>sp|VG32_BPML5|GENE 32 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 4 HVPISTR 10
H+P+ST+
Sbjct: 101 HIPLSTK 107


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3 SHVPISTR 10
SHVP+S R
Sbjct: 145 SHVPLSPR 152


>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3 SHVPISTR 10
SHVP+S R
Sbjct: 145 SHVPLSPR 152


>sp|VL2_PAPVE|MINOR capsid protein L2|European elk papillomavirus (EEPV)

Query: 1 QKSHVPISTR 10
++SH+PI R
Sbjct: 401 RRSHIPIVAR 410


>sp|VL2_HPV10|MINOR capsid protein L2|Human papillomavirus type 10

Query: 4 HVPISTR 10
+VPISTR
Sbjct: 71 YVPISTR 77


>sp|YR419_MIMIV|UNCHARACTERIZED short-chain type dehydrogenase/reductase R419|Acanthamoeba

Query: 1 QKSHVPIS 8
QKS++P+S
Sbjct: 195 QKSNIPVS 202


>sp|POL_SIVGB|GAG-POL polyprotein|Simian immunodeficiency virus (isolate GB1)

Query: 2 KSHVPIS 8
KSH PIS
Sbjct: 265 KSHCPIS 271




299|SequenceR|1500|1491|SIKEAQKSHV

>sp|CEP2_SHV21|CYTOPLASMIC envelopment protein 2|Saimiriine herpesvirus 2 (strain 11)

Query: 1 SIKEAQKSHV 10
SIK ++KSH+
Sbjct: 120 SIKASKKSHL 129




300|SequenceR|1505|1496|TSPRRSIKEA

>sp|RDRP_ASPVP|RNA replication polyprotein|Apple stem pitting virus (isolate

Query: 2 SPRRSIKEA 10
SPRRS+ E+
Sbjct: 1400 SPRRSLAES 1408


>sp|ENLYS_BPHC1|SAR-ENDOLYSIN phage HP1 (strain HP1c1)

Query: 1 TSPRRSIKEA 10
T RR+IKEA
Sbjct: 84 TDLRRNIKEA 93


>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)

Query: 1 TSPRRSIK 8
T+PR+SIK
Sbjct: 11 TNPRQSIK 18




301|SequenceR|1510|1501|EHTDETSPRR

>sp|ENV_OMVVS|ENVELOPE glycoprotein gp160|Ovine maedi visna related virus

Query: 1 EHTDETSPR 9
EH TSPR
Sbjct: 905 EHEKRTSPR 913


>sp|POL2_TOTV|RNA2 polyprotein|Tomato torrado virus (isolate Solanum

Query: 2 HTDETSPRR 10
H DE PRR
Sbjct: 1105 HDDEFFPRR 1113




302|SequenceR|1515|1506|AKSDVEHTDE

***** No hits found ******


303|SequenceR|1520|1511|DPILAAKSDV

***** No hits found ******


304|SequenceR|1525|1516|RDQLWDPILA

>sp|Y098_OSHVF|UNCHARACTERIZED protein ORF98|Ostreid herpesvirus 1 (isolate France)

Query: 1 RDQLWDPI 8
RD+LW+ I
Sbjct: 323 RDELWNEI 330


>sp|YR528_MIMIV|PUTATIVE 5'-3' exonuclease R528|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 DQLWD 6
DQLWD
Sbjct: 559 DQLWD 563


>sp|RDRP_QRFVE|RNA-DIRECTED RNA polymerase catalytic subunit|Quaranfil virus (isolate

Query: 3 QLWDPI 8
Q WDPI
Sbjct: 148 QTWDPI 153


>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus

Query: 2 DQLWDP 7
D+LW+P
Sbjct: 233 DKLWEP 238


>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2 DQLWDP 7
D+LW+P
Sbjct: 233 DKLWEP 238


>sp|PG117_VACCW|UNCOATING factor OPG117|Vaccinia virus (strain Western Reserve)

Query: 2 DQLWDP 7
D+LW+P
Sbjct: 233 DKLWEP 238


>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 DQLWDP 7
D+LW+P
Sbjct: 233 DKLWEP 238


>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)

Query: 2 DQLWDP 7
D+LW+P
Sbjct: 233 DKLWEP 238


>sp|AV2_ICMV|PROTEIN AV2|Indian cassava mosaic virus (ICMV)

Query: 4 LWDPIL 9
+WDP+L
Sbjct: 1 MWDPLL 6


>sp|RDRP_REOVJ|RNA-DIRECTED RNA polymerase lambda-3|Reovirus type 2 (strain D5/Jones)

Query: 2 DQLWDPIL 9
D L+DPIL
Sbjct: 165 DALYDPIL 172


>sp|L_EBLV2|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 2 (strain

Query: 1 RDQLWDPIL 9
RDQ+W +L
Sbjct: 215 RDQIWGSLL 223


>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 QLWDPI 8
QLW+P+
Sbjct: 1204 QLWEPV 1209


>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 QLWDPI 8
QLW+P+
Sbjct: 1221 QLWEPV 1226


>sp|AV2_TYLCC|PROTEIN V2|Tomato yellow leaf curl China

Query: 4 LWDPIL 9
+WDP+L
Sbjct: 1 MWDPLL 6


>sp|POL_SIVGB|GAG-POL polyprotein|Simian immunodeficiency virus (isolate GB1)

Query: 1 RDQLW 5
RDQLW
Sbjct: 1387 RDQLW 1391


>sp|AV2_TYLCI|PROTEIN V2|Tomato yellow leaf curl virus

Query: 4 LWDPIL 9
+WDP+L
Sbjct: 1 MWDPLL 6


>sp|PHOSP_DMSVA|PHOSPHOPROTEIN melanogaster sigma virus (isolate

Query: 3 QLWDPIL 9
QL+DP+L
Sbjct: 304 QLYDPVL 310


>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 RDQLW 5
RDQLW
Sbjct: 1399 RDQLW 1403


>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 RDQLW 5
RDQLW
Sbjct: 1400 RDQLW 1404


>sp|POL_SIVSP|GAG-POL polyprotein|Simian immunodeficiency virus (isolate PBj14/BCL-3)

Query: 1 RDQLW 5
RDQLW
Sbjct: 1387 RDQLW 1391


>sp|POL_SIVM2|GAG-POL polyprotein|Simian immunodeficiency virus (isolate Mm251)

Query: 1 RDQLW 5
RDQLW
Sbjct: 1386 RDQLW 1390


>sp|POL_SIVM1|GAG-POL polyprotein|Simian immunodeficiency virus (isolate Mm142-83)

Query: 1 RDQLW 5
RDQLW
Sbjct: 1386 RDQLW 1390


>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 RDQLW 5
RDQLW
Sbjct: 1401 RDQLW 1405


>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 RDQLW 5
RDQLW
Sbjct: 1402 RDQLW 1406


>sp|POL_SIVS4|GAG-POL polyprotein|Simian immunodeficiency virus (isolate F236/smH4)

Query: 1 RDQLW 5
RDQLW
Sbjct: 1387 RDQLW 1391


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 RDQLW 5
RDQLW
Sbjct: 1401 RDQLW 1405


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 RDQLW 5
RDQLW
Sbjct: 1400 RDQLW 1404


>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 RDQLW 5
RDQLW
Sbjct: 1399 RDQLW 1403


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 RDQLW 5
RDQLW
Sbjct: 1401 RDQLW 1405


>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 RDQLW 5
RDQLW
Sbjct: 1402 RDQLW 1406


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 RDQLW 5
RDQLW
Sbjct: 1400 RDQLW 1404


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 RDQLW 5
RDQLW
Sbjct: 1401 RDQLW 1405


>sp|VP1_AQRVA|OUTER capsid protein VP1|Aquareovirus A (isolate Chum

Query: 4 LWDPILA 10
+WDP+L+
Sbjct: 1087 VWDPVLS 1093




305|SequenceR|1530|1521|ERNSPRDQLW

>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)

Query: 3 NSPRDQLW 10
N+P D LW
Sbjct: 942 NNPLDNLW 949


>sp|VPB_BEFVB|PROTEIN beta|Bovine ephemeral fever virus (strain

Query: 2 RNSPRDQLW 10
RN D+LW
Sbjct: 64 RNDKSDKLW 72


>sp|POLN_DCVEB|REPLICASE polyprotein|Drosophila C virus (strain EB)

Query: 1 ERNSPRDQLW 10
+RN+P Q W
Sbjct: 1360 KRNAPGKQQW 1369


>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United

Query: 2 RNSPRDQLW 10
RN+P + LW
Sbjct: 69 RNAPGEILW 77




306|SequenceR|1535|1526|EESPMERNSP

>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 2 ESPMER 7
ESPMER
Sbjct: 6900 ESPMER 6905


>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 5 MERNSP 10
MERNSP
Sbjct: 38 MERNSP 43


>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)

Query: 5 MERNSP 10
MERNSP
Sbjct: 38 MERNSP 43


>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)

Query: 1 EESPMERNSP 10
+E P E+N+P
Sbjct: 469 DEGPREQNNP 478


>sp|L_ALLVP|RNA-DIRECTED RNA polymerase L|Allpahuayo mammarenavirus (isolate

Query: 1 EESPMERNS 9
+ESP ER S
Sbjct: 1083 DESPTERTS 1091


>sp|PRO_ADE40|PROTEASE adenovirus F serotype 40

Query: 3 SPMERN 8
SPMERN
Sbjct: 139 SPMERN 144




307|SequenceR|1540|1531|GNLTGEESPM

>sp|F11_FOWPN|PROTEIN F11 homolog|Fowlpox virus (strain NVSL) (FPV)

Query: 4 TGEESP 9
TGEESP
Sbjct: 14 TGEESP 19




308|SequenceR|1545|1536|FPSTLGNLTG

>sp|ETF1_FOWPN|EARLY transcription factor 70 kDa|Fowlpox virus (strain NVSL) (FPV)

Query: 1 FPSTLGNLTG 10
F T+GNLTG
Sbjct: 330 FIDTIGNLTG 339


>sp|ENV_WDSV|ENVELOPE glycoprotein|Walleye dermal sarcoma virus (WDSV)

Query: 1 FPSTLGNLT 9
FP+ LGN++
Sbjct: 89 FPTELGNMS 97


>sp|YL057_MIMIV|UNCHARACTERIZED protein L57|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 FPSTLGNLT 9
FP +GN+T
Sbjct: 142 FPVKIGNIT 150


>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5

Query: 1 FPSTLGNLT 9
FPS +G+LT
Sbjct: 467 FPSLIGSLT 475


>sp|RDRP_RRSVT|RNA-DIRECTED RNA polymerase|Rice ragged stunt virus (isolate

Query: 2 PSTLGNLT 9
PSTL NLT
Sbjct: 692 PSTLLNLT 699


>sp|SPIKE_BRV1|SPIKE glycoprotein|Breda virus 1 (BRV-1)

Query: 1 FPSTLGNLT 9
PSTL N T
Sbjct: 930 LPSTLANFT 938


>sp|SPIKE_BEV|SPIKE glycoprotein|Berne virus (BEV)

Query: 2 PSTLGNLTG 10
PSTL N T
Sbjct: 930 PSTLANFTS 938


>sp|YO01_BPL2|UNCHARACTERIZED 66.6 kDa protein|Acholeplasma phage L2 (Bacteriophage L2)

Query: 1 FPSTLG 6
FPSTLG
Sbjct: 472 FPSTLG 477




309|SequenceR|1550|1541|DMAPKFPSTL

>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1

Query: 4 PKFPSTL 10
P+FPST+
Sbjct: 190 PRFPSTI 196


>sp|VU26_HHV6G|PROTEIN U26|Human herpesvirus 6A (strain GS)

Query: 2 MAPKFPSTL 10
MAPK PS L
Sbjct: 72 MAPKLPSLL 80


>sp|VU26_HHV6U|PROTEIN U26|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 MAPKFPSTL 10
MAPK PS L
Sbjct: 72 MAPKLPSLL 80


>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5

Query: 1 DMAPKFPSTL 10
D+AP P+TL
Sbjct: 62 DLAPGAPATL 71


>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2

Query: 1 DMAPKFPSTL 10
D+AP P+TL
Sbjct: 62 DLAPGAPATL 71


>sp|VG56_ICHVA|UNCHARACTERIZED protein ORF56|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 DMAPKFPSTL 10
DMAP+F T
Sbjct: 445 DMAPRFMDTF 454


>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40

Query: 1 DMAPKFPSTL 10
D+AP P+TL
Sbjct: 62 DLAPGTPATL 71


>sp|SHUT_EHV1V|VIRION host shutoff protein|Equine herpesvirus 1 (strain V592)

Query: 1 DMAPKFPSTL 10
D+ P FP TL
Sbjct: 233 DIMPLFPPTL 242


>sp|SHUT_EHV1B|VIRION host shutoff protein|Equine herpesvirus 1 (strain Ab4p)

Query: 1 DMAPKFPSTL 10
D+ P FP TL
Sbjct: 233 DIMPLFPPTL 242




310|SequenceR|1555|1546|YYYNTDMAPK

>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P

Query: 1 YYYNTDMAPK 10
Y+Y +DM PK
Sbjct: 479 YWYGSDMRPK 488


>sp|023R_FRG3G|UNCHARACTERIZED protein 023R|Frog virus 3 (isolate Goorha)

Query: 1 YYYNTDMA 8
++Y+TDMA
Sbjct: 21 FFYSTDMA 28


>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate

Query: 3 YNTDMAP 9
YNTD+ P
Sbjct: 147 YNTDLLP 153


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 YYYNTDM 7
YYY+TD+
Sbjct: 3460 YYYSTDV 3466


>sp|GH_FHV1|ENVELOPE glycoprotein H|Feline herpesvirus 1 (FeHV-1) (Feline

Query: 1 YYYNTDMA 8
YYYN+D+
Sbjct: 417 YYYNSDVG 424


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 YYYNTDM 7
YYY+TD+
Sbjct: 3460 YYYSTDV 3466




311|SequenceR|1560|1551|REVASYYYNT

>sp|POLG_FCVUR|GENOME polyprotein|Feline calicivirus (strain Cat/United

Query: 1 REVASYYYNT 10
RE+ SY +NT
Sbjct: 218 REIKSYEHNT 227


>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 2 EVASYYYN 9
EV YYYN
Sbjct: 674 EVVVYYYN 681


>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 2 EVASYYYN 9
EV YYYN
Sbjct: 675 EVVVYYYN 682


>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 2 EVASYYYN 9
EV YYYN
Sbjct: 675 EVVIYYYN 682


>sp|GD_SUHVR|ENVELOPE glycoprotein D|Suid herpesvirus 1 (strain Rice)

Query: 1 REVASYYY 8
REV +Y+Y
Sbjct: 231 REVVNYWY 238


>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 2 EVASYYYN 9
E+ YYYN
Sbjct: 675 EIVIYYYN 682


>sp|VP2_BTV1A|OUTER capsid protein VP2|Bluetongue virus 1 (isolate Australia)

Query: 1 REVASYYYNT 10
RE+ YY NT
Sbjct: 815 REMLKYYINT 824




312|SequenceR|1565|1556|RMLNNREVAS

>sp|RDRP_PCV87|REPLICASE large subunit|Peanut clump virus (isolate 87/TGTA2)

Query: 1 RMLNNREV 8
RMLN REV
Sbjct: 942 RMLNAREV 949




313|SequenceR|1570|1561|ISQSLRMLNN

***** No hits found ******


314|SequenceR|1575|1566|VPTFPISQSL

>sp|YR472_MIMIV|UNCHARACTERIZED protein R472|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 VPTFPISQSL 10
+PT+PI+ +
Sbjct: 1102 IPTYPIANPI 1111


>sp|GH_PSHV1|ENVELOPE glycoprotein H|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 PTFPISQSL 10
P+FP+S SL
Sbjct: 151 PSFPLSGSL 159




315|SequenceR|1580|1571|EGRPPVPTFP

>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 EGRPPVPTFP 10
E RP VP FP
Sbjct: 303 ESRPLVPQFP 312


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 EGRPPVPTFP 10
E RP VP FP
Sbjct: 303 ESRPLVPQFP 312


>sp|GLYCO_IHNVW|GLYCOPROTEIN hematopoietic necrosis virus (strain

Query: 2 GRPPVPTFP 10
GRPP P+ P
Sbjct: 488 GRPPTPSVP 496


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 3 RPPVPTF 9
RPP+P+F
Sbjct: 29 RPPIPSF 35


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 EGRPPVPTFP 10
E RP VP FP
Sbjct: 303 ESRPLVPQFP 312


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 EGRPPVPTFP 10
E RP VP FP
Sbjct: 303 ESRPLVPQFP 312


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 EGRPPVPTFP 10
E RP VP FP
Sbjct: 303 ESRPLVPQFP 312


>sp|VF170_IIV3|UNCHARACTERIZED protein 97L|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 GRPPVPTFP 10
G PP+PT P
Sbjct: 153 GAPPLPTKP 161


>sp|NS1_I78AA|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Pintail/Alberta/268/1978

Query: 1 EGRPPVPT 8
+GRPP+P+
Sbjct: 209 DGRPPLPS 216


>sp|GLYCO_IHNVR|GLYCOPROTEIN hematopoietic necrosis virus (strain

Query: 2 GRPPVPTFP 10
GRPP P+ P
Sbjct: 488 GRPPTPSAP 496


>sp|PG108_VAR67|ENVELOPE protein H3|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3 RPPVPTFP 10
RPP TFP
Sbjct: 17 RPPSETFP 24


>sp|PG108_MONPV|ENVELOPE protein OPG108|Monkeypox virus (MPXV)

Query: 3 RPPVPTFP 10
RPP TFP
Sbjct: 16 RPPSETFP 23


>sp|PG108_VACCC|ENVELOPE protein H3|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 RPPVPTFP 10
RPP TFP
Sbjct: 16 RPPSETFP 23


>sp|VF233_ASFP4|UNCHARACTERIZED protein H233R|African swine fever virus (isolate

Query: 3 RPPVPTFP 10
RPPV T+P
Sbjct: 99 RPPVSTWP 106


>sp|VF233_ASFWA|UNCHARACTERIZED protein H233R|African swine fever virus (isolate

Query: 3 RPPVPTFP 10
RPPV T+P
Sbjct: 99 RPPVSTWP 106


>sp|L_BEFVB|RNA-DIRECTED RNA polymerase L|Bovine ephemeral fever virus (strain

Query: 1 EGRPPVPTFP 10
+ RP +P FP
Sbjct: 328 KSRPKIPEFP 337


>sp|ENLYS_BPTWO|ENDOLYSIN PlyTW|Staphylococcus phage Twort (strain DSM

Query: 1 EGRPPVPT 8
EG+ PVPT
Sbjct: 348 EGKTPVPT 355


>sp|NS1_I83A6|NON-STRUCTURAL protein 1|Influenza A virus (strain

Query: 2 GRPPVPT 8
GRPP+P+
Sbjct: 210 GRPPLPS 216


>sp|NS1_I83A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Pennsylvania/1/1983

Query: 2 GRPPVPT 8
GRPP+P+
Sbjct: 210 GRPPLPS 216


>sp|NS1_I77AG|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Budgerigar/Hokkaido/1/1977

Query: 1 EGRPPVP 7
+GRPP+P
Sbjct: 209 DGRPPLP 215


>sp|NS1_I05A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 2 GRPPVPT 8
GRPP+P+
Sbjct: 201 GRPPLPS 207


>sp|NS1_I66A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Turkey/Wisconsin/1/1966

Query: 1 EGRPPVP 7
+GRPP+P
Sbjct: 209 DGRPPLP 215


>sp|CAPSD_BPSPP|MAJOR capsid protein|Bacillus phage SPP1 (Bacteriophage SPP1)

Query: 1 EGRPPVPT 8
EG+P VPT
Sbjct: 248 EGQPEVPT 255


>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 3 RPPVPTFP 10
RP +P FP
Sbjct: 305 RPKIPKFP 312


>sp|NS1_I87A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/Ohio/556/1987

Query: 1 EGRPPVP 7
+GRPP+P
Sbjct: 209 DGRPPLP 215


>sp|NS1_I85A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Ruddy

Query: 1 EGRPPVP 7
+GRPP+P
Sbjct: 209 DGRPPLP 215


>sp|NS1_I80AE|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Blue-winged

Query: 1 EGRPPVP 7
+GRPP+P
Sbjct: 209 DGRPPLP 215


>sp|NS1_I80A8|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Turkey/Minnesota/833/1980

Query: 1 EGRPPVP 7
+GRPP+P
Sbjct: 209 DGRPPLP 215


>sp|NS1_I80A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980

Query: 1 EGRPPVP 7
+GRPP+P
Sbjct: 209 DGRPPLP 215


>sp|NS1_I78A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New

Query: 1 EGRPPVP 7
+GRPP+P
Sbjct: 209 DGRPPLP 215


>sp|NS1_I76A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Anas

Query: 1 EGRPPVP 7
+GRPP+P
Sbjct: 209 DGRPPLP 215


>sp|NS1_I68A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Turkey/Ontario/6118/1968

Query: 1 EGRPPVP 7
+GRPP+P
Sbjct: 209 DGRPPLP 215


>sp|NS1_I59A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Scotland/1959

Query: 1 EGRPPVP 7
+GRPP+P
Sbjct: 209 DGRPPLP 215


>sp|NS1_I00A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Duck/Hong

Query: 1 EGRPPVP 7
+GRPP+P
Sbjct: 204 DGRPPLP 210


>sp|NS1_I82A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Seal/Massachusetts/133/1982

Query: 1 EGRPPVP 7
+GRPP+P
Sbjct: 209 DGRPPLP 215


>sp|NS1_I79A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Grey

Query: 1 EGRPPVP 7
+GRPP+P
Sbjct: 209 DGRPPLP 215


>sp|NS1_I85A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985

Query: 1 EGRPPVP 7
+GRPP+P
Sbjct: 209 DGRPPLP 215


>sp|NS1_I78AC|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Turkey/Minnesota/501/1978

Query: 1 EGRPPVP 7
+GRPP+P
Sbjct: 209 DGRPPLP 215


>sp|NS1_I01A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 1 EGRPPVP 7
+GRPP+P
Sbjct: 204 DGRPPLP 210


>sp|NS1_I01A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky

Query: 1 EGRPPVP 7
+GRPP+P
Sbjct: 204 DGRPPLP 210


>sp|RDRP_BPMS2|RNA-DIRECTED RNA polymerase beta chain|Escherichia phage MS2 (Bacteriophage MS2)

Query: 5 PVPTFP 10
PVPTFP
Sbjct: 530 PVPTFP 535


>sp|NS1_I66A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Turkey/Ontario/7732/1966

Query: 1 EGRPPVP 7
+GRPP+P
Sbjct: 209 DGRPPLP 215


>sp|NS1_I63A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Duck/Ukraine/1/1963

Query: 1 EGRPPVP 7
+GRPP+P
Sbjct: 206 DGRPPLP 212


>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 3 RPPVPTFP 10
RP +P FP
Sbjct: 305 RPKIPKFP 312


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 2 GRPPVPTF 9
RPP+P F
Sbjct: 3265 ARPPMPMF 3272


>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 2 GRPPVPTF 9
RPP+P F
Sbjct: 3265 ARPPMPMF 3272


>sp|NS1_I76AM|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mynah/Haneda-Thai/1976

Query: 1 EGRPPVP 7
+GRPP+P
Sbjct: 206 DGRPPLP 212


>sp|NS1_I01A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 1 EGRPPVP 7
+GRPP+P
Sbjct: 204 DGRPPLP 210


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 2 GRPPVPTF 9
RPP+P F
Sbjct: 3145 ARPPMPMF 3152


>sp|NS1_I56A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Duck/England/1/1956

Query: 1 EGRPPVP 7
+GRPP+P
Sbjct: 209 DGRPPLP 215


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 2 GRPPVPTF 9
RPP+P F
Sbjct: 3145 ARPPMPMF 3152


>sp|NS1_I01A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 1 EGRPPVP 7
+GRPP+P
Sbjct: 204 DGRPPLP 210


>sp|NS1_I82A8|NON-STRUCTURAL protein 1|Influenza A virus (strain

Query: 2 GRPPVP 7
GRPP+P
Sbjct: 210 GRPPLP 215


>sp|NS1_I18A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Brevig

Query: 2 GRPPVP 7
GRPP+P
Sbjct: 210 GRPPLP 215


>sp|NS1_I78A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New

Query: 2 GRPPVP 7
GRPP+P
Sbjct: 210 GRPPLP 215


>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)

Query: 1 EGRPPVPTFP 10
+GRP V FP
Sbjct: 77 KGRPSVSYFP 86


>sp|NS1_I72A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Shearwater/Australia/1972

Query: 1 EGRPPVP 7
+GRPP P
Sbjct: 209 DGRPPFP 215


>sp|NS1_I02A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Brescia/1902

Query: 3 RPPVPT 8
RPP+PT
Sbjct: 211 RPPLPT 216


>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate

Query: 1 EGRPPVPT 8
E RPP PT
Sbjct: 722 EVRPPTPT 729


>sp|GLYCO_IHNVO|GLYCOPROTEIN hematopoietic necrosis virus (strain

Query: 2 GRPPVPT 8
GRPP P+
Sbjct: 488 GRPPTPS 494


>sp|RDRP_YOMV|REPLICASE large subunit|Youcai mosaic virus (YoMV)

Query: 1 EGRPPVPT 8
+G PP PT
Sbjct: 808 DGEPPEPT 815


>sp|NS1_I24A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Japan/1924

Query: 2 GRPPVP 7
GRPP+P
Sbjct: 207 GRPPLP 212


>sp|NS1_I02A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002

Query: 2 GRPPVP 7
GRPP+P
Sbjct: 188 GRPPLP 193


>sp|M1249_ASFWA|MINOR capsid protein M1249L|African swine fever virus (isolate

Query: 1 EGRPPVPT 8
+G PP PT
Sbjct: 1052 QGAPPPPT 1059


>sp|M1249_ASFP4|MINOR capsid protein M1249L|African swine fever virus (isolate

Query: 1 EGRPPVPT 8
+G PP PT
Sbjct: 1052 QGAPPPPT 1059


>sp|M1249_ASFM2|MINOR capsid protein M1249L|African swine fever virus (isolate

Query: 1 EGRPPVPT 8
+G PP PT
Sbjct: 1052 QGAPPPPT 1059


>sp|M1249_ASFK5|MINOR capsid protein M1249L|African swine fever virus (isolate

Query: 1 EGRPPVPT 8
+G PP PT
Sbjct: 1053 QGAPPPPT 1060


>sp|M1249_ASFB7|MINOR capsid protein M1249L|African swine fever virus (strain

Query: 1 EGRPPVPT 8
+G PP PT
Sbjct: 1052 QGAPPPPT 1059


>sp|NS1_I83A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Turkey/Ireland/1378/1983

Query: 2 GRPPVP 7
GRPP+P
Sbjct: 210 GRPPLP 215


>sp|RDRP_BPFR|RNA-DIRECTED RNA polymerase beta chain|Enterobacteria phage fr (Bacteriophage

Query: 5 PVPTFP 10
PVP FP
Sbjct: 530 PVPVFP 535


>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 GRPPVPTF 9
GRPP P+
Sbjct: 108 GRPPPPSL 115


>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 GRPPVPTF 9
GRPP P+
Sbjct: 108 GRPPPPSL 115


>sp|GAG_EIAVY|GAG polyprotein|Equine infectious anemia virus (strain

Query: 1 EGRPPVPTFP 10
+GRP TFP
Sbjct: 427 QGRPQKQTFP 436


>sp|GAG_EIAVC|GAG polyprotein|Equine infectious anemia virus (isolate

Query: 1 EGRPPVPTFP 10
+GRP TFP
Sbjct: 427 QGRPQKQTFP 436


>sp|GAG_EIAV9|GAG polyprotein|Equine infectious anemia virus (isolate

Query: 1 EGRPPVPTFP 10
+GRP TFP
Sbjct: 427 QGRPQKQTFP 436




316|SequenceR|1585|1576|YVTVPEGRPP

>sp|VG42_BPMD2|GENE 42 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 4 VPEGRPP 10
VPEGRPP
Sbjct: 45 VPEGRPP 51


>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /

Query: 1 YVTVPEGRP 9
YVT P RP
Sbjct: 161 YVTTPNPRP 169


>sp|VC17_VACCC|ANKYRIN repeat protein C17/B23|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 YVTVPEGRP 9
YVT P RP
Sbjct: 175 YVTTPNPRP 183


>sp|P4_RTBVP|PROTEIN P4|Rice tungro bacilliform virus (isolate

Query: 4 VPEGRPP 10
VPEG PP
Sbjct: 253 VPEGLPP 259


>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2

Query: 2 VTVPEGRPP 10
V++P G PP
Sbjct: 331 VSLPHGSPP 339


>sp|RDRP_TNVA|RNA-DIRECTED RNA polymerase|Tobacco necrosis virus (strain A)

Query: 2 VTVPEGRP 9
V +P GRP
Sbjct: 225 VVIPSGRP 232


>sp|VE2_HPV35|REGULATORY protein E2|Human papillomavirus 35

Query: 1 YVTVPEG 7
Y TVP+G
Sbjct: 103 YTTVPQG 109


>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5

Query: 2 VTVPEGRPP 10
V++P G PP
Sbjct: 331 VSLPHGSPP 339


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 2 VTVPEGRPP 10
V P G+PP
Sbjct: 825 VIFPNGKPP 833


>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)

Query: 1 YVTVPEGRPP 10
Y+ P G PP
Sbjct: 716 YLAAPTGIPP 725


>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 2 VTVPEGRPP 10
V P G+PP
Sbjct: 825 VIFPNGKPP 833


>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United

Query: 3 TVPEGRPP 10
T P G+PP
Sbjct: 1260 TEPRGKPP 1267


>sp|BP06_BPT4|BASEPLATE wedge protein gp6|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 YVTVPEG 7
Y+T+P G
Sbjct: 122 YITIPRG 128




317|SequenceR|1590|1581|SEELRYVTVP

>sp|RDRP_PMV|RNA replication protein|Papaya mosaic potexvirus (PMV)

Query: 1 SEELRYVTVP 10
S E +YVT+P
Sbjct: 274 STETKYVTMP 283


>sp|POL1_RCMV|RNA1 polyprotein|Red clover mottle virus (RCMV)

Query: 3 ELRYVTVP 10
+LRY TVP
Sbjct: 1729 DLRYHTVP 1736




318|SequenceR|1595|1586|LINPSSEELR

>sp|VP6_MPRVN|UNCHARACTERIZED protein VP6|Micromonas pusilla reovirus (isolate Netherlands/2005)

Query: 2 INPSSEELR 10
+NP EE+R
Sbjct: 223 MNPDDEEMR 231


>sp|YL768_MIMIV|PUTATIVE ankyrin repeat protein L768|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 LINPSSEEL 9
++NPS E L
Sbjct: 133 MVNPSKESL 141




319|SequenceR|1600|1591|SMSNNLINPS

>sp|POLG_EBHSG|GENOME polyprotein|European brown hare syndrome virus

Query: 1 SMSNNLINP 9
S+ NNLINP
Sbjct: 1947 SVYNNLINP 1955


>sp|POLG_RHDVS|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 SMSNNLINP 9
S+ NNLINP
Sbjct: 1958 SVYNNLINP 1966


>sp|POLG_RHDVB|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 SMSNNLINP 9
S+ NNLINP
Sbjct: 1958 SVYNNLINP 1966


>sp|POLG_RHDVA|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 SMSNNLINP 9
S+ NNLINP
Sbjct: 1958 SVYNNLINP 1966


>sp|POLG_RHDVF|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 SMSNNLINP 9
S+ NNLINP
Sbjct: 1958 SVYNNLINP 1966


>sp|POLG_RHDV3|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 SMSNNLINP 9
S+ NNLINP
Sbjct: 1958 SVYNNLINP 1966


>sp|POLG_PEMVC|GENOME polyprotein|Pepper mottle virus (isolate California)

Query: 1 SMSNNLINPS 10
SMS N++ PS
Sbjct: 31 SMSTNIVRPS 40


>sp|MVP_PEMVC|P3N-PIPO polyprotein|Pepper mottle virus (isolate California)

Query: 1 SMSNNLINPS 10
SMS N++ PS
Sbjct: 31 SMSTNIVRPS 40


>sp|NS1AB_OASV1|NON-STRUCTURAL polyprotein 1AB|Ovine astrovirus 1 (OAstV-1)

Query: 1 SMSNNLIN 8
+M NNL+N
Sbjct: 1162 TMDNNLVN 1169


>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 3 SNNLINP 9
SNN+INP
Sbjct: 120 SNNMINP 126


>sp|NSP1B_ROTGA|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate

Query: 2 MSNNLINPS 10
MSN L NP+
Sbjct: 21 MSNQLCNPA 29


>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 SNNLINP 9
SNN+INP
Sbjct: 120 SNNMINP 126


>sp|P4H_MIMIV|PUTATIVE prolyl 4-hydroxylase|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 NNLINPS 10
NNLINP+
Sbjct: 64 NNLINPT 70




320|SequenceR|1605|1596|LQSWSSMSNN

>sp|UBC2_MIMIV|PROBABLE ubiquitin-conjugating enzyme E2 L709|Acanthamoeba polyphaga

Query: 2 QSWSSMSN 9
+SW+SM+N
Sbjct: 104 ESWTSMNN 111


>sp|VSP1_BPLLH|STRUCTURAL protein|Lactococcus phage LL-H (Lactococcus delbrueckii

Query: 2 QSWSSMSNN 10
Q+W S+ NN
Sbjct: 114 QTWKSLDNN 122


>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)

Query: 3 SWSSMSN 9
SW+ MSN
Sbjct: 346 SWTEMSN 352




321|SequenceR|1610|1601|KACLGLQSWS

>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)

Query: 3 CLGLQSWS 10
CL L +WS
Sbjct: 1685 CLDLNTWS 1692


>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P

Query: 4 LGLQSWS 10
LGLQ W+
Sbjct: 121 LGLQEWA 127


>sp|US21_HCMVM|MEMBRANE protein US21|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 CLGLQSWS 10
CLGL W+
Sbjct: 64 CLGLLRWA 71


>sp|US21_HCMVA|UNCHARACTERIZED protein HWLF2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 CLGLQSWS 10
CLGL W+
Sbjct: 64 CLGLLRWA 71




322|SequenceR|1615|1606|SLFEIKACLG

>sp|POL2_SQMVM|RNA2 polyprotein|Squash mosaic virus (strain melon)

Query: 1 SLFEIKACL 9
+LFE+ ACL
Sbjct: 983 TLFELNACL 991


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 SLFEIKACL 9
SL E+K CL
Sbjct: 990 SLIEVKTCL 998


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 SLFEIKACL 9
SL E+K CL
Sbjct: 990 SLIEVKTCL 998


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 SLFEIKACL 9
SL E+K CL
Sbjct: 990 SLIEVKTCL 998


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 SLFEIKACL 9
SL E+K CL
Sbjct: 990 SLIEVKTCL 998


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 SLFEIKACL 9
SL E+K CL
Sbjct: 990 SLIEVKTCL 998


>sp|UL20_PSHV1|PROTEIN UL20|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 LFEIKACLG 10
LF+I AC+G
Sbjct: 150 LFQIAACIG 158


>sp|UL24_ALHV1|PROTEIN UL24 homolog|Alcelaphine herpesvirus 1 (strain C500)

Query: 4 EIKACLG 10
E+K CLG
Sbjct: 91 ELKTCLG 97




323|SequenceR|1620|1611|GMEEKSLFEI

>sp|V012_FOWPN|PUTATIVE ankyrin repeat protein FPV012|Fowlpox virus (strain NVSL) (FPV)

Query: 1 GMEEKSLFEI 10
G+ +KSLFEI
Sbjct: 219 GIGDKSLFEI 228


>sp|VP5_EHDV1|OUTER capsid protein VP5|Epizootic hemorrhagic disease virus 1

Query: 1 GMEEKSLFEI 10
G+EEK FEI
Sbjct: 141 GVEEKDQFEI 150




324|SequenceR|1625|1616|RRLGGGMEEK

>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40

Query: 2 RLGGGMEEK 10
RLGGG + K
Sbjct: 117 RLGGGQKAK 125


>sp|DNBI_BHV2B|MAJOR DNA-binding protein|Bovine herpesvirus 2 (strain BMV)

Query: 1 RRLGGGMEEK 10
R GGG E++
Sbjct: 300 RECGGGFEQR 309




325|SequenceR|1630|1621|QVKVARRLGG

***** No hits found ******


326|SequenceR|1635|1626|ESWTCQVKVA

>sp|YL202_MIMIV|UNCHARACTERIZED protein L202|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 SWTCQVK 8
SWT QVK
Sbjct: 89 SWTVQVK 95


>sp|NCAP_BCNVU|NUCLEOPROTEIN Canyon mammarenavirus (isolate Mouse/United

Query: 2 SWTCQVK 8
+WTC VK
Sbjct: 21 NWTCPVK 27


>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA

Query: 1 ESWTCQ 6
ESW CQ
Sbjct: 1030 ESWCCQ 1035


>sp|NCAP_RVFVZ|NUCLEOPROTEIN valley fever virus (strain

Query: 3 WTCQVKV 9
WTCQ V
Sbjct: 114 WTCQALV 120


>sp|L_CPSVP|RNA-DIRECTED RNA polymerase L|Citrus psorosis virus (isolate Spain/P-121)

Query: 1 ESWTC 5
E+WTC
Sbjct: 2133 EAWTC 2137


>sp|TIPL_BPN15|TAIL tip protein L|Escherichia phage N15 (Bacteriophage N15)

Query: 1 ESWTCQVK 8
++W CQV+
Sbjct: 69 KAWPCQVE 76




327|SequenceR|1640|1631|KLIDHESWTC

>sp|MVP_PVYHU|P3N-PIPO polyprotein|Potato virus Y (strain Hungarian)

Query: 2 LIDHESWTC 10
L+DHE+ TC
Sbjct: 690 LVDHETQTC 698


>sp|POLG_PVYHU|GENOME polyprotein|Potato virus Y (strain Hungarian)

Query: 2 LIDHESWTC 10
L+DHE+ TC
Sbjct: 690 LVDHETQTC 698


>sp|VINT_BPMFR|INTEGRASE phage FRAT1 (Mycobacteriophage FRAT1)

Query: 1 KLIDHESWT 9
+LID+E WT
Sbjct: 12 RLIDNEEWT 20


>sp|VINT_BPMD2|INTEGRASE phage D29 (Mycobacteriophage D29)

Query: 1 KLIDHESWT 9
+LID+E WT
Sbjct: 53 RLIDNEEWT 61


>sp|POLG_PVYO|GENOME polyprotein|Potato virus Y (strain O)

Query: 2 LIDHESWTC 10
L+DH++ TC
Sbjct: 690 LVDHDTQTC 698


>sp|MVP_PVYN|P3N-PIPO polyprotein|Potato virus Y (strain N)

Query: 2 LIDHESWTC 10
L+DH++ TC
Sbjct: 690 LVDHDTQTC 698


>sp|POLG_PVYN|GENOME polyprotein|Potato virus Y (strain N)

Query: 2 LIDHESWTC 10
L+DH++ TC
Sbjct: 690 LVDHDTQTC 698


>sp|POLG_PVYC|GENOME polyprotein|Potato virus Y (strain C)

Query: 2 LIDHESWTC 10
L+DH++ TC
Sbjct: 690 LVDHDTQTC 698


>sp|SRC_RSVP|TYROSINE-PROTEIN kinase transforming protein Src|Rous sarcoma virus subgroup C

Query: 2 LIDHESWT 9
L D+ESWT
Sbjct: 89 LYDYESWT 96


>sp|SRC_RSVH1|TYROSINE-PROTEIN kinase transforming protein Src|Rous sarcoma virus (strain H-19)

Query: 2 LIDHESWT 9
L D+ESWT
Sbjct: 89 LYDYESWT 96


>sp|MVP_PEMVC|P3N-PIPO polyprotein|Pepper mottle virus (isolate California)

Query: 2 LIDHESWTC 10
L+DH + TC
Sbjct: 693 LVDHNTQTC 701


>sp|POLG_PEMVC|GENOME polyprotein|Pepper mottle virus (isolate California)

Query: 2 LIDHESWTC 10
L+DH + TC
Sbjct: 693 LVDHNTQTC 701


>sp|RDRP_PCVC|RNA-DIRECTED RNA polymerase|Penicillium chrysogenum virus (isolate Caston/2003)

Query: 1 KLIDHESW 8
K +DHE W
Sbjct: 972 KSVDHERW 979


>sp|DUT_GAHVM|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Gallid herpesvirus 2 (strain

Query: 2 LIDHESWT 9
L+DHES T
Sbjct: 374 LVDHESAT 381


>sp|BPD_BPP2|PROBABLE baseplate hub protein|Escherichia phage P2 (Bacteriophage P2)

Query: 1 KLIDHESWT 9
++ID + WT
Sbjct: 345 RVIDEQDWT 353


>sp|SRC_RSVSE|TYROSINE-PROTEIN kinase transforming protein Src|Rous sarcoma virus subgroup E

Query: 2 LIDHESW 8
L D+ESW
Sbjct: 89 LYDYESW 95


>sp|SRC_RSVSA|TYROSINE-PROTEIN kinase transforming protein Src|Rous sarcoma virus subgroup A

Query: 2 LIDHESW 8
L D+ESW
Sbjct: 89 LYDYESW 95


>sp|001R_FRG3G|PUTATIVE transcription factor 001R|Frog virus 3 (isolate Goorha)

Query: 1 KLIDHESWT 9
KL+D++ W+
Sbjct: 32 KLLDYKEWS 40


>sp|Y071_OSHVF|UNCHARACTERIZED protein ORF71|Ostreid herpesvirus 1 (isolate France)

Query: 1 KLIDHESW 8
+LI H++W
Sbjct: 414 RLISHKAW 421


>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain

Query: 1 KLIDHESW 8
K +D+E+W
Sbjct: 72 KSVDYENW 79




328|SequenceR|1645|1636|YLHGSKLIDH

>sp|Y021_OSHVF|UNCHARACTERIZED protein ORF21|Ostreid herpesvirus 1 (isolate France)

Query: 1 YLHGSKL 7
YLHGSK+
Sbjct: 59 YLHGSKI 65


>sp|LTP_MHV68|LARGE tegument protein deneddylase|Murid herpesvirus 4 (MuHV-4) (Murine

Query: 2 LHGSKLI 8
LHGSK+I
Sbjct: 227 LHGSKII 233


>sp|EV45_MEHVH|ENVELOPE protein UL45 homolog|Meleagrid herpesvirus 1 (strain H2)

Query: 3 HGSKLID 9
H SKLID
Sbjct: 110 HNSKLID 116


>sp|EV45_GAHVB|ENVELOPE protein UL45 homolog|Gallid herpesvirus 2 (strain bc-1)

Query: 3 HGSKLID 9
H SKLID
Sbjct: 109 HNSKLID 115


>sp|PTPH3_MDBVW|TYROSINE phosphatase H3|Microplitis demolitor bracovirus (isolate Webb)

Query: 3 HGSKLIDH 10
HGSK+ D+
Sbjct: 73 HGSKMYDY 80


>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 1 YLHGSK 6
YLHG+K
Sbjct: 2002 YLHGNK 2007




329|SequenceR|1650|1641|FSKIIYLHGS

>sp|UL21_HCMVA|UNCHARACTERIZED protein UL21|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 FSKIIYLHGS 10
FSKIIY+ S
Sbjct: 106 FSKIIYIQNS 115


>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974

Query: 1 FSKIIYLH 8
F+K+IY H
Sbjct: 249 FTKVIYFH 256


>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956

Query: 1 FSKIIYLH 8
F+K+IY H
Sbjct: 249 FTKVIYFH 256


>sp|POLG_ASGVK|GENOME polyprotein|Apple stem grooving virus (strain

Query: 1 FSKIIYLH 8
F KII++H
Sbjct: 165 FPKIIFMH 172


>sp|VP16_GAHVM|TEGUMENT protein VP16 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 FSKIIYLH 8
F+K++Y+H
Sbjct: 244 FAKLLYVH 251


>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 3 KIIYLH 8
K+IYLH
Sbjct: 1132 KVIYLH 1137




330|SequenceR|1655|1646|VVEPLFSKII

>sp|TERS_BPLSK|TERMINASE small subunit|Lactococcus phage SK1 (Lactococcus lactis

Query: 3 EPLFSKII 10
EPLFS+II
Sbjct: 18 EPLFSQII 25


>sp|TERS_BPLP2|TERMINASE small subunit|Lactococcus phage p2 (Lactococcus lactis

Query: 3 EPLFSKII 10
EPLFS+II
Sbjct: 18 EPLFSQII 25


>sp|CP_CSVMV|PUTATIVE Polyprotein CP|Cassava vein mosaic virus (CsVMV)

Query: 1 VVEPLFSKII 10
++EP+F +I
Sbjct: 1118 IIEPIFQDVI 1127


>sp|055L_FRG3G|PUTATIVE helicase 055L|Frog virus 3 (isolate Goorha)

Query: 2 VEPLFSKI 9
+EP FSKI
Sbjct: 244 IEPEFSKI 251




331|SequenceR|1660|1651|SSWTNVVEPL

>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1

Query: 2 SWTNVVEPL 10
S+TN+ EP+
Sbjct: 459 SYTNIAEPV 467


>sp|NS1_AADNV|INITIATOR protein NS1|Aedes albopictus densovirus (isolate Boublik/1994)

Query: 3 WTNVVEP 9
W N++EP
Sbjct: 471 WENIIEP 477


>sp|VG28_BPMD2|MINOR tail protein Gp28|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 SSWTNVVEPL 10
S W N+V+P
Sbjct: 198 SKWRNIVKPF 207


>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 WTNVVEP 9
W+NVV P
Sbjct: 208 WSNVVTP 214


>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 WTNVVEP 9
W+NVV P
Sbjct: 208 WSNVVTP 214


>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain

Query: 1 SSWTNVVEPL 10
S+W+ ++ PL
Sbjct: 895 SAWSELISPL 904


>sp|POL1_TOTV|RNA1 polyprotein|Tomato torrado virus (isolate Solanum

Query: 3 WTNVVEPL 10
W +++EP+
Sbjct: 1568 WVSIIEPM 1575


>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain

Query: 1 SSWTNVVE 8
SSWTN+ +
Sbjct: 1513 SSWTNIFD 1520


>sp|VG28_BPML5|MINOR tail protein Gp28|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 1 SSWTNVVEPL 10
++W N+V+P
Sbjct: 198 ANWRNIVKPF 207


>sp|POLG_DWV|GENOME polyprotein|Deformed wing virus (DWV)

Query: 4 TNVVEPL 10
TN+VEPL
Sbjct: 509 TNLVEPL 515


>sp|VGA7_ALHV1|PUTATIVE C-type lectin protein A7|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 SWTNVVEPL 10
SW N + PL
Sbjct: 88 SWLNTLSPL 96




332|SequenceR|1665|1656|DEKYISSWTN

>sp|1A_CCMV|REPLICATION protein 1a|Cowpea chlorotic mottle virus (CCMV)

Query: 4 YISSWTN 10
YI SWTN
Sbjct: 249 YIHSWTN 255


>sp|L_MILVL|RNA-DIRECTED RNA polymerase L|Mirafiori lettuce virus (isolate

Query: 1 DEKYISSWTN 10
DE+Y+SS N
Sbjct: 881 DERYLSSKNN 890


>sp|PG064_VACCW|PROTEIN OPG064|Vaccinia virus (strain Western Reserve)

Query: 3 KYISSWT 9
+Y+SSWT
Sbjct: 572 RYLSSWT 578


>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 KYISSWT 9
+Y+SSWT
Sbjct: 572 RYLSSWT 578


>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3 KYISSWT 9
+Y+SSWT
Sbjct: 572 RYLSSWT 578


>sp|RDRP_MCMVK|RNA-DIRECTED RNA polymerase|Maize chlorotic mottle virus (isolate

Query: 2 EKYISSWT 9
E+Y SWT
Sbjct: 930 EEYFKSWT 937


>sp|404L_IIV6|UNCHARACTERIZED protein 404L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 DEKYISSWTN 10
DEK+I W++
Sbjct: 122 DEKFIFKWSH 131


>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain

Query: 5 ISSWTN 10
ISSWTN
Sbjct: 1512 ISSWTN 1517


>sp|CAPSD_REOVJ|INNER capsid protein lambda-1|Reovirus type 2 (strain D5/Jones)

Query: 3 KYISSWTN 10
++ISSW N
Sbjct: 222 EFISSWQN 229


>sp|CAPSD_REOVL|INNER capsid protein lambda-1|Reovirus type 1 (strain Lang)

Query: 3 KYISSWTN 10
++ISSW N
Sbjct: 222 EFISSWQN 229


>sp|CAPSD_REOVD|INNER capsid protein lambda-1|Reovirus type 3 (strain Dearing)

Query: 3 KYISSWTN 10
++ISSW N
Sbjct: 222 EFISSWQN 229


>sp|NSP4_WTV|NON-STRUCTURAL protein 4|Wound tumor virus (WTV)

Query: 3 KYISSW 8
KY++SW
Sbjct: 225 KYVTSW 230


>sp|GAG_JEMBR|GAG polyprotein|Jembrana disease virus (JDV)

Query: 2 EKYISSWT 9
EKY +WT
Sbjct: 100 EKYWEAWT 107


>sp|TOP2_IIV6|DNA topoisomerase 2|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 EKYISSWTN 10
+K++ WTN
Sbjct: 177 KKFVQEWTN 185


>sp|PORTL_BPHK7|PORTAL protein|Enterobacteria phage HK97 (Bacteriophage HK97)

Query: 2 EKYISSWTN 10
+ YIS W N
Sbjct: 328 QPYISRWEN 336


>sp|MVP_PRSVH|P3N-PIPO polyprotein|Papaya ringspot virus (strain P

Query: 1 DEKYISSWTN 10
DEK S WT+
Sbjct: 670 DEKKESPWTH 679




333|SequenceR|1670|1661|LHLVTDEKYI

>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 1 LHLVTDEKYI 10
+HL D KYI
Sbjct: 2005 VHLYKDRKYI 2014


>sp|YL128_MIMIV|PUTATIVE GMC-type oxidoreductase L128|Acanthamoeba polyphaga mimivirus

Query: 3 LVTDEKYI 10
LVTD KY+
Sbjct: 185 LVTDPKYV 192


>sp|POLG_HED68|GENOME polyprotein|Human enterovirus D68 (EV68) (EV-68)

Query: 1 LHLVTDEKYI 10
+HL D KY+
Sbjct: 1999 VHLYKDRKYV 2008


>sp|YR379_MIMIV|UNCHARACTERIZED protein R379|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 HLVTDEKYI 10
HLV D+K++
Sbjct: 12 HLVNDDKFL 20


>sp|POL_FIVT2|POL polyprotein|Feline immunodeficiency virus (isolate TM2)

Query: 1 LHLVTDEKYI 10
++++TD +YI
Sbjct: 648 MNIITDSQYI 657


>sp|UL33_HHV6U|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 6A (strain

Query: 1 LHLVTDEKY 9
LH VT++KY
Sbjct: 219 LHDVTEKKY 227




334|SequenceR|1675|1666|IERLCLHLVT

>sp|DPOL_EHV2|DNA polymerase catalytic subunit|Equine herpesvirus 2 (strain 86/87)

Query: 2 ERLCLH 7
+RLCLH
Sbjct: 605 DRLCLH 610


>sp|POLG_PYFV1|GENOME polyprotein|Parsnip yellow fleck virus (isolate

Query: 1 IERLCLHLV 9
+ERL HLV
Sbjct: 1856 LERLIFHLV 1864




335|SequenceR|1680|1671|ARQQQIERLC

>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 RQQQIERLC 10
RQQ ++R C
Sbjct: 494 RQQHLDRQC 502


>sp|LTP_GAHVM|LARGE tegument protein deneddylase|Gallid herpesvirus 2 (strain

Query: 1 ARQQQIERLC 10
A Q+Q+E LC
Sbjct: 1888 ATQKQMEGLC 1897




336|SequenceR|1685|1676|TLKQAARQQQ

***** No hits found ******


337|SequenceR|1690|1681|QNFAFTLKQA

>sp|Y067_SIFVH|UNCHARACTERIZED protein 67|Sulfolobus islandicus filamentous virus (isolate

Query: 1 QNFAFTLKQ 9
QN FTL+Q
Sbjct: 48 QNLGFTLEQ 56


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 1 QNFAFTLKQ 9
+NF+F+LK+
Sbjct: 547 RNFSFSLKE 555


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1 QNFAFTLKQ 9
+NF+F+LK+
Sbjct: 547 RNFSFSLKE 555


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 1 QNFAFTLKQ 9
+NF+F+LK+
Sbjct: 546 RNFSFSLKE 554


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 1 QNFAFTLKQ 9
+NF+F+LK+
Sbjct: 546 RNFSFSLKE 554


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 1 QNFAFTLKQ 9
+NF+F+LK+
Sbjct: 549 RNFSFSLKE 557


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 1 QNFAFTLKQ 9
+NF+F+LK+
Sbjct: 549 RNFSFSLKE 557


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1 QNFAFTLKQ 9
+NF+F+LK+
Sbjct: 549 RNFSFSLKE 557


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1 QNFAFTLKQ 9
+NF+F+LK+
Sbjct: 549 RNFSFSLKE 557


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1 QNFAFTLKQ 9
+NF+F+LK+
Sbjct: 549 RNFSFSLKE 557


>sp|RIR1_EHV2|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Equine herpesvirus 2 (strain 86/87)

Query: 1 QNFAFTLKQA 10
Q+F+F LK+A
Sbjct: 709 QSFSFFLKEA 718


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 1 QNFAFTLKQ 9
+NF+F+LK+
Sbjct: 546 RNFSFSLKE 554


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 1 QNFAFTLKQ 9
+NF+F+LK+
Sbjct: 546 RNFSFSLKE 554


>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 QNFAFTLK 8
QN+ FTLK
Sbjct: 587 QNYDFTLK 594




338|SequenceR|1695|1686|SKPKMQNFAF

>sp|RDRP_PMV|RNA replication protein|Papaya mosaic potexvirus (PMV)

Query: 3 PKMQNFAF 10
PK+QN F
Sbjct: 714 PKLQNLGF 721


>sp|VF453_IIV3|PUTATIVE thioredoxin-like protein 041R|Invertebrate iridescent virus 3

Query: 1 SKPKMQNFA 9
+KP QNFA
Sbjct: 54 AKPAFQNFA 62


>sp|PORTL_BPP2|PROBABLE portal protein|Escherichia phage P2 (Bacteriophage P2)

Query: 1 SKPKMQNFAF 10
S PKM+ F F
Sbjct: 19 SGPKMEAFTF 28




339|SequenceR|1700|1691|PSYPISKPKM

>sp|YR472_MIMIV|UNCHARACTERIZED protein R472|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PSYPISKP 8
P+YPI+ P
Sbjct: 1103 PTYPIANP 1110


>sp|L_TUPVT|RNA-DIRECTED RNA polymerase L|Tupaia virus (isolate Tupaia/Thailand/-/1986) (TUPV)

Query: 1 PSYPISK 7
PSYP+SK
Sbjct: 1466 PSYPLSK 1472


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 1 PSYPISKPK 9
P+ PI+KPK
Sbjct: 1504 PTLPITKPK 1512


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 1 PSYPISKPKM 10
P YPI K K+
Sbjct: 911 PHYPIGKCKL 920


>sp|CVC1_HHV7J|CAPSID vertex component 1|Human herpesvirus 7 (strain JI)

Query: 2 SYPISKPK 9
S+PIS+P+
Sbjct: 191 SHPISRPE 198


>sp|VF196_IIV3|UNCHARACTERIZED protein 020R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 PSYPISKPK 9
PSY + KPK
Sbjct: 144 PSYTLGKPK 152


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 1 PSYPISKPK 9
P+ P++KPK
Sbjct: 1496 PTLPVAKPK 1504


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 1 PSYPISKPK 9
P+ P++KPK
Sbjct: 1495 PTLPVAKPK 1503


>sp|ADPRM_MIMIV|PUTATIVE ADP-ribosyl glycohydrolase L543|Acanthamoeba polyphaga mimivirus

Query: 2 SYPISKPKM 10
+YPI+ PK+
Sbjct: 316 NYPIANPKI 324




340|SequenceR|1705|1696|VELFRPSYPI

>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 VELFRPSYP 9
VELF P++P
Sbjct: 190 VELFDPAHP 198


>sp|L_RSVT|RNA-DIRECTED RNA polymerase L|Rice stripe virus (isolate T)

Query: 2 ELFRPSYP 9
E+FR S+P
Sbjct: 686 EMFRESFP 693


>sp|DPOL_IIV3|DNA polymerase 120R|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 ELFRPSYPI 10
ELFRP++ I
Sbjct: 1037 ELFRPNFII 1045


>sp|GLYCO_VHSV0|SPIKE glycoprotein|Viral hemorrhagic septicemia virus (strain

Query: 4 FRPSYP 9
FRPS+P
Sbjct: 336 FRPSHP 341


>sp|POL1_TRSV|RNA1 polyprotein|Tobacco ringspot virus (TobRV) (TRSV)

Query: 4 FRPSYPI 10
FRP++PI
Sbjct: 1014 FRPAHPI 1020


>sp|POL_FENV1|POL polyprotein|Feline endogenous virus ECE1

Query: 2 ELFRPSYP 9
EL+RP +P
Sbjct: 954 ELYRPGHP 961


>sp|HBEAG_DHBV1|EXTERNAL core antigen|Duck hepatitis B virus (strain

Query: 4 FRPSYPI 10
F+P YPI
Sbjct: 158 FQPDYPI 164


>sp|CAPSD_DHBV1|CAPSID protein|Duck hepatitis B virus (strain

Query: 4 FRPSYPI 10
F+P YPI
Sbjct: 115 FQPDYPI 121


>sp|HBEAG_DHBV3|EXTERNAL core antigen|Duck hepatitis B virus (strain

Query: 4 FRPSYPI 10
F+P YPI
Sbjct: 158 FQPDYPI 164


>sp|YR722_MIMIV|UNCHARACTERIZED protein R722|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 ELFRPSYPI 10
E+FRP+ P+
Sbjct: 565 EMFRPNDPL 573


>sp|HBEAG_DHBVQ|EXTERNAL core antigen|Duck hepatitis B virus (isolate

Query: 4 FRPSYPI 10
F+P YPI
Sbjct: 158 FQPDYPI 164


>sp|HBEAG_HPBDB|EXTERNAL core antigen|Duck hepatitis B virus (isolate

Query: 4 FRPSYPI 10
F+P YPI
Sbjct: 158 FQPDYPI 164


>sp|HBEAG_HPBDW|EXTERNAL core antigen|Duck hepatitis B virus (isolate

Query: 4 FRPSYPI 10
F+P YPI
Sbjct: 158 FQPDYPI 164


>sp|CAPSD_HHBV|CAPSID protein|Heron hepatitis B virus (HHBV)

Query: 4 FRPSYPI 10
F+P YPI
Sbjct: 115 FQPDYPI 121


>sp|CAPSD_DHBVQ|CAPSID protein|Duck hepatitis B virus (isolate

Query: 4 FRPSYPI 10
F+P YPI
Sbjct: 115 FQPDYPI 121


>sp|HBEAG_HPBDC|EXTERNAL core antigen|Duck hepatitis B virus (strain

Query: 4 FRPSYPI 10
F+P YPI
Sbjct: 158 FQPDYPI 164


>sp|CAPSD_DHBV3|CAPSID protein|Duck hepatitis B virus (strain

Query: 4 FRPSYPI 10
F+P YPI
Sbjct: 115 FQPDYPI 121


>sp|CAPSD_HPBDC|CAPSID protein|Duck hepatitis B virus (strain

Query: 4 FRPSYPI 10
F+P YPI
Sbjct: 115 FQPDYPI 121


>sp|CAPSD_HPBDB|CAPSID protein|Duck hepatitis B virus (isolate

Query: 4 FRPSYPI 10
F+P YPI
Sbjct: 115 FQPDYPI 121


>sp|HBEAG_HHBV|EXTERNAL core antigen|Heron hepatitis B virus (HHBV)

Query: 4 FRPSYPI 10
F+P YPI
Sbjct: 158 FQPDYPI 164


>sp|CAPSD_HPBDW|CAPSID protein|Duck hepatitis B virus (isolate

Query: 4 FRPSYPI 10
F+P YPI
Sbjct: 115 FQPDYPI 121




341|SequenceR|1710|1701|CYLLFVELFR

>sp|YL204_MIMIV|UNCHARACTERIZED protein L204|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 YLLFVELFR 10
Y+LF ELF+
Sbjct: 295 YVLFNELFK 303


>sp|Y021_OSHVF|UNCHARACTERIZED protein ORF21|Ostreid herpesvirus 1 (isolate France)

Query: 3 LLFVELFR 10
LL+VE FR
Sbjct: 188 LLYVEFFR 195


>sp|L_NDVB1|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Chicken/United

Query: 1 CYLLFV 6
CYL+FV
Sbjct: 1955 CYLVFV 1960


>sp|L_NDVB|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Beaudette

Query: 1 CYLLFV 6
CYL+FV
Sbjct: 1955 CYLVFV 1960




342|SequenceR|1715|1706|QGASHCYLLF

>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41

Query: 4 SHCYLL 9
SHCYLL
Sbjct: 505 SHCYLL 510


>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40

Query: 4 SHCYLL 9
SHCYLL
Sbjct: 503 SHCYLL 508


>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12

Query: 4 SHCYLL 9
SHCYLL
Sbjct: 520 SHCYLL 525


>sp|SHUT_ADEP3|SHUTOFF protein|Porcine adenovirus A serotype 3

Query: 4 SHCYLL 9
+HCYLL
Sbjct: 544 AHCYLL 549


>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5

Query: 5 HCYLL 9
HCYLL
Sbjct: 537 HCYLL 541


>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2

Query: 5 HCYLL 9
HCYLL
Sbjct: 537 HCYLL 541


>sp|POLS_SAV3|STRUCTURAL polyprotein|Alphavirus salmon subtype 3 (SAV3)

Query: 2 GASHCY 7
GA+HC+
Sbjct: 959 GAAHCF 964


>sp|POLS_SAV2|STRUCTURAL polyprotein|Alphavirus salmon subtype 2 (SAV2)

Query: 2 GASHCY 7
GA+HC+
Sbjct: 961 GAAHCF 966


>sp|POLS_SAV1|STRUCTURAL polyprotein|Alphavirus salmon subtype 1 (SAV1)

Query: 2 GASHCY 7
GA+HC+
Sbjct: 960 GAAHCF 965


>sp|VP10_WTV|NON-STRUCTURAL protein Pns10|Wound tumor virus (WTV)

Query: 2 GASHCYLLF 10
G C+LLF
Sbjct: 180 GTDSCFLLF 188


>sp|ENV_SFVCP|ENVELOPE glycoprotein gp130|Simian foamy virus (isolate chimpanzee)

Query: 1 QGASHCYLL 9
Q +HCYL+
Sbjct: 230 QEFAHCYLV 238


>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3

Query: 1 QGASHCYLL 9
Q +HCYL+
Sbjct: 230 QEFAHCYLV 238


>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1

Query: 1 QGASHCYLL 9
Q +HCYL+
Sbjct: 230 QEFAHCYLV 238


>sp|L_NDVB1|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Chicken/United

Query: 1 QGASHCYLLF 10
+G CYL+F
Sbjct: 1950 RGDMECYLVF 1959


>sp|L_NDVB|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Beaudette

Query: 1 QGASHCYLLF 10
+G CYL+F
Sbjct: 1950 RGDMECYLVF 1959


>sp|PG195_MONPV|PROTEIN OPG195|Monkeypox virus (MPXV)

Query: 2 GASHCYLLF 10
G+SH Y+ F
Sbjct: 93 GSSHTYIKF 101




343|SequenceR|1720|1711|EVAFWQGASH

>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)

Query: 2 VAFWQGASH 10
V+FW G SH
Sbjct: 1819 VSFWNGKSH 1827


>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)

Query: 2 VAFWQGASH 10
V+FW G H
Sbjct: 1816 VSFWNGKPH 1824


>sp|RDRP_BNYVS|REPLICASE necrotic yellow vein virus

Query: 4 FWQGASH 10
FW G+SH
Sbjct: 143 FWVGSSH 149


>sp|UL49_EHV2|UNCHARACTERIZED gene 66 protein|Equine herpesvirus 2 (strain 86/87)

Query: 2 VAFWQGA 8
VA+WQG
Sbjct: 55 VAYWQGG 61


>sp|VR2B_BPT4|PROTEIN rIIB|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 EVAFWQGAS 9
E+A WQG S
Sbjct: 28 ELADWQGVS 36


>sp|OBP_EHV1V|REPLICATION origin-binding protein|Equine herpesvirus 1 (strain V592)

Query: 1 EVAFWQG 7
+VAFW G
Sbjct: 371 DVAFWGG 377


>sp|OBP_EHV1B|REPLICATION origin-binding protein|Equine herpesvirus 1 (strain Ab4p)

Query: 1 EVAFWQG 7
+VAFW G
Sbjct: 371 DVAFWGG 377


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 2 VAFWQGASH 10
+AFW+ A+H
Sbjct: 1346 LAFWELAAH 1354


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 2 VAFWQGASH 10
+AFW+ A+H
Sbjct: 1346 LAFWELAAH 1354


>sp|FIB37_BPT2|LONG tail fiber protein Gp37|Enterobacteria phage T2 (Bacteriophage T2)

Query: 2 VAFWQGAS 9
VA W+GAS
Sbjct: 1073 VARWRGAS 1080


>sp|VP22_SUHVK|TEGUMENT protein VP22|Suid herpesvirus 1 (strain Kaplan)

Query: 5 WQGASH 10
W+GA+H
Sbjct: 166 WRGATH 171




344|SequenceR|1725|1716|GTMCEEVAFW

>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)

Query: 3 MCEEVAFW 10
MCEE+ W
Sbjct: 591 MCEEMTSW 598


>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 3 MCEEVAFW 10
MCEE+ W
Sbjct: 590 MCEEMTSW 597


>sp|YR154_MIMIV|PUTATIVE BTB/POZ domain and WD-repeat|Acanthamoeba polyphaga mimivirus

Query: 1 GTMCEEVAF 9
GT+C+E +F
Sbjct: 357 GTLCKEYSF 365


>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 2 TMCEEVAFW 10
+MCEE+ W
Sbjct: 593 SMCEEMINW 601


>sp|RPB2_ASFWA|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (isolate

Query: 2 TMCEEVAFW 10
+M +EV FW
Sbjct: 655 SMVDEVEFW 663


>sp|RPB2_ASFP4|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (isolate

Query: 2 TMCEEVAFW 10
+M +EV FW
Sbjct: 655 SMVDEVEFW 663


>sp|RPB2_ASFM2|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (isolate

Query: 2 TMCEEVAFW 10
+M +EV FW
Sbjct: 655 SMVDEVEFW 663


>sp|RPB2_ASFK5|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (isolate

Query: 2 TMCEEVAFW 10
+M +EV FW
Sbjct: 655 SMVDEVEFW 663


>sp|RPB2_ASFB7|DNA-DIRECTED RNA polymerase RPB2 homolog|African swine fever virus (strain

Query: 2 TMCEEVAFW 10
+M +EV FW
Sbjct: 655 SMVDEVEFW 663


>sp|YL567_MIMIV|UNCHARACTERIZED protein L567|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 EEVAFW 10
+EVAFW
Sbjct: 62 DEVAFW 67


>sp|OBP_EHV1V|REPLICATION origin-binding protein|Equine herpesvirus 1 (strain V592)

Query: 5 EEVAFW 10
E+VAFW
Sbjct: 370 EDVAFW 375


>sp|OBP_EHV1B|REPLICATION origin-binding protein|Equine herpesvirus 1 (strain Ab4p)

Query: 5 EEVAFW 10
E+VAFW
Sbjct: 370 EDVAFW 375


>sp|POL1_SDVS5|RNA1 polyprotein|Satsuma dwarf virus (isolate Satsuma

Query: 1 GTMCEEVAFW 10
T+CE ++ W
Sbjct: 614 ATVCESLSVW 623


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 3 MCEEVAFW 10
+C+ VA+W
Sbjct: 3566 ICDFVAYW 3573


>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 3 MCEEVAFW 10
+C+ VA+W
Sbjct: 3566 ICDFVAYW 3573


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 3 MCEEVAFW 10
+C+ VA+W
Sbjct: 3441 VCDFVAYW 3448


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 3 MCEEVAFW 10
+C+ VA+W
Sbjct: 3441 VCDFVAYW 3448




345|SequenceR|1730|1721|YKRFEGTMCE

>sp|GRAN_GVAO|GRANULIN orana granulovirus (AoGV)

Query: 1 YKRFEGTMC 9
Y R EGT C
Sbjct: 9 YSRHEGTTC 17


>sp|RDRP_PAV|RNA-DIRECTED RNA polymerase|Pariacoto virus (PaV)

Query: 1 YKRFEGTMCE 10
Y RF+G++ E
Sbjct: 565 YSRFDGSISE 574


>sp|RDRP_TOBSV|RNA-DIRECTED RNA polymerase 2a|Tobacco streak virus (strain WC)

Query: 1 YKRFEGT 7
Y+RF+GT
Sbjct: 664 YRRFKGT 670


>sp|YR826_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R826|Acanthamoeba

Query: 4 FEGTMC 9
FEGT+C
Sbjct: 701 FEGTIC 706


>sp|GRAN_GVHB|GRANULIN brillians granulovirus (HbGV)

Query: 1 YKRFEGTMC 9
Y R EGT C
Sbjct: 9 YSRHEGTTC 17


>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 5 EGTMCE 10
EG+MCE
Sbjct: 108 EGSMCE 113


>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)

Query: 1 YKRFEGTMCE 10
YK++ T CE
Sbjct: 691 YKQYHPTACE 700


>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)

Query: 1 YKRFEGTMCE 10
YK++ T CE
Sbjct: 691 YKQYHPTACE 700


>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)

Query: 1 YKRFEGTMCE 10
YK++ T CE
Sbjct: 691 YKQYHPTACE 700


>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)

Query: 1 YKRFEGTMCE 10
YK++ T CE
Sbjct: 691 YKQYHPTACE 700


>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)

Query: 1 YKRFEGTMCE 10
YK++ T CE
Sbjct: 691 YKQYHPTACE 700


>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)

Query: 1 YKRFEGTMCE 10
YK++ T CE
Sbjct: 691 YKQYHPTACE 700


>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)

Query: 1 YKRFEGTMCE 10
YK++ T CE
Sbjct: 691 YKQYHPTACE 700


>sp|GLYC_EMARV|ENVELOPE glycoprotein|European mountain ash ringspot-associated virus

Query: 2 KRFEGTMCE 10
K ++GT CE
Sbjct: 375 KVYQGTFCE 383


>sp|GRAN_GVCL|GRANULIN leucotreta granulosis virus (ClGV)

Query: 1 YKRFEGTMC 9
Y R +GT C
Sbjct: 9 YSRHDGTTC 17


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 5 EGTMCE 10
EG+MCE
Sbjct: 108 EGSMCE 113


>sp|GRAN_GVCPM|GRANULIN pomonella granulosis virus (isolate

Query: 1 YKRFEGTMC 9
Y R +GT C
Sbjct: 9 YSRHDGTSC 17




346|SequenceR|1735|1726|GNNNNYKRFE

>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 1 GNNNNYKRFE 10
G+ NY +FE
Sbjct: 3485 GDGKNYHKFE 3494


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 1 GNNNNYKRFE 10
G+ NY +FE
Sbjct: 3485 GDGKNYHKFE 3494


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2 NNNNYK 7
N+NNYK
Sbjct: 1426 NDNNYK 1431


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2 NNNNYK 7
N+NNYK
Sbjct: 1426 NDNNYK 1431


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2 NNNNYK 7
N+NNYK
Sbjct: 1426 NDNNYK 1431


>sp|DNBI_ALHV1|MAJOR DNA-binding protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 3 NNNYKRFE 10
NNN K+FE
Sbjct: 815 NNNSKQFE 822


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3 NNNYKRFE 10
N+N+K+F+
Sbjct: 1386 NSNFKKFQ 1393


>sp|VE2_CRPVK|REGULATORY protein E2|Cottontail rabbit papillomavirus (strain Kansas)

Query: 1 GNNNNY 6
GNNN Y
Sbjct: 126 GNNNEY 131




347|SequenceR|1740|1731|PIIEDGNNNN

>sp|POL_BLVAU|GAG-PRO-POL polyprotein|Bovine leukemia virus (isolate Australian)

Query: 1 PIIEDGNNN 9
PII +GN N
Sbjct: 110 PIISEGNRN 118


>sp|POL_BLVJ|GAG-PRO-POL polyprotein|Bovine leukemia virus (isolate Japanese

Query: 1 PIIEDGNNN 9
PII +GN N
Sbjct: 110 PIISEGNRN 118


>sp|ENV_SIVTN|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate TAN1)

Query: 4 EDGNNNN 10
EDGNNN+
Sbjct: 181 EDGNNNS 187


>sp|GAG_BLVJ|GAG polyprotein|Bovine leukemia virus (isolate Japanese

Query: 1 PIIEDGNNN 9
PII +GN N
Sbjct: 110 PIISEGNRN 118


>sp|PRO_BLVAU|GAG-PRO polyprotein|Bovine leukemia virus (isolate Australian)

Query: 1 PIIEDGNNN 9
PII +GN N
Sbjct: 110 PIISEGNRN 118


>sp|PRO_BLVJ|GAG-PRO polyprotein|Bovine leukemia virus (isolate Japanese

Query: 1 PIIEDGNNN 9
PII +GN N
Sbjct: 110 PIISEGNRN 118


>sp|VSR_RGDV|SUPPRESSOR of RNA-mediated gene silencing|Rice gall dwarf virus (RGDV)

Query: 5 DGNNNN 10
DGN+NN
Sbjct: 39 DGNSNN 44


>sp|GAG_BLVAU|GAG polyprotein|Bovine leukemia virus (isolate Australian)

Query: 1 PIIEDGNNN 9
PII +GN N
Sbjct: 110 PIISEGNRN 118




348|SequenceR|1745|1736|ELTNTPIIED

>sp|L_RYSV|RNA-DIRECTED RNA polymerase L|Rice yellow stunt virus (RYSV)

Query: 3 TNTPIIED 10
TNTP+IE+
Sbjct: 103 TNTPLIEN 110


>sp|VF179_IIV3|UNCHARACTERIZED protein 035R|Invertebrate iridescent virus 3 (IIV-3)

Query: 3 TNTPIIED 10
+N P+IED
Sbjct: 849 SNAPVIED 856


>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)

Query: 1 ELTNTPIIED 10
++T+TPI+ D
Sbjct: 779 QITSTPIVVD 788


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 4 NTPIIED 10
N+P+IED
Sbjct: 39 NSPLIED 45


>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)

Query: 1 ELTNTPIIED 10
++T+TPI+ D
Sbjct: 598 QITSTPIVVD 607


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 4 NTPIIED 10
N+P+IED
Sbjct: 39 NSPLIED 45


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 4 NTPIIED 10
N+P+IED
Sbjct: 39 NSPLIED 45


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 4 NTPIIED 10
N+P+IED
Sbjct: 39 NSPLIED 45


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 4 NTPIIED 10
N+P+IED
Sbjct: 39 NSPLIED 45


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 4 NTPIIED 10
N+P+IED
Sbjct: 39 NSPLIED 45


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 4 NTPIIED 10
N+P+IED
Sbjct: 39 NSPLIED 45


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired

Query: 4 NTPIIED 10
N+P+IED
Sbjct: 40 NSPLIED 46


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate

Query: 4 NTPIIED 10
N+P+IED
Sbjct: 39 NSPLIED 45


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 4 NTPIIED 10
N+P+IED
Sbjct: 39 NSPLIED 45


>sp|DPOL_SFAVA|DNA polymerase|Spodoptera frugiperda ascovirus 1a (SfAV-1a)

Query: 2 LTNTPII 8
+TNTPI+
Sbjct: 480 ITNTPIV 486


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 4 NTPIIED 10
N+P+IED
Sbjct: 39 NSPLIED 45


>sp|L_EBLV2|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 2 (strain

Query: 4 NTPIIED 10
N+P+IED
Sbjct: 39 NSPLIED 45


>sp|VP1_RRSVT|STRUCTURAL protein VP1|Rice ragged stunt virus (isolate

Query: 1 ELTNTPIIED 10
ELT+TP +D
Sbjct: 14 ELTDTPQTQD 23


>sp|POLG_SPMMV|GENOME polyprotein|Sweet potato mild mottle virus

Query: 1 ELTNTPII 8
E+ NTPI+
Sbjct: 2937 EIVNTPIL 2944


>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)

Query: 1 ELTNTPIIED 10
EL+N PI+++
Sbjct: 305 ELSNFPIVKE 314




349|SequenceR|1750|1741|ALMIEELTNT

>sp|VG72_ICHVA|UNCHARACTERIZED protein ORF72|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 MIEELTNT 10
MI+EL+NT
Sbjct: 774 MIQELSNT 781




350|SequenceR|1755|1746|TWHSFALMIE

>sp|RDRP_PVMR|RNA replication polyprotein|Potato virus M (strain Russian)

Query: 2 WHSFALMI 9
WHSFA ++
Sbjct: 896 WHSFAYLV 903


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1 TWHSFALMIE 10
TW SFA +E
Sbjct: 2821 TWFSFAAFLE 2830


>sp|HEMA_I77AB|HEMAGGLUTININ A virus (strain A/USSR/90/1977

Query: 2 WHSFAL 7
WH+FAL
Sbjct: 269 WHAFAL 274


>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954

Query: 2 WHSFAL 7
WH+FAL
Sbjct: 269 WHAFAL 274


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 1 TWHSFALMIE 10
TW SFA +E
Sbjct: 2821 TWFSFAAFLE 2830


>sp|RDRP_IBDVA|RNA-DIRECTED RNA polymerase|Avian infectious bursal disease virus

Query: 1 TWHSFALMI 9
TW SFA+ I
Sbjct: 451 TWASFAMNI 459


>sp|CAPSH_ADES1|HEXON protein|Snake adenovirus serotype 1 (SnAdV-1)

Query: 2 WHSFAL 7
WH FAL
Sbjct: 328 WHYFAL 333


>sp|VG74_SHV21|G-PROTEIN coupled receptor homolog ECRF3|Saimiriine herpesvirus 2 (strain 11)

Query: 1 TWHSFA 6
TW+SFA
Sbjct: 202 TWYSFA 207


>sp|3605L_ASFP4|PROTEIN MGF 360-5L|African swine fever virus (isolate

Query: 1 TWHSFALM 8
T+HSF+L+
Sbjct: 363 TFHSFSLL 370


>sp|3604L_ASFP4|PROTEIN MGF 360-4L|African swine fever virus (isolate

Query: 1 TWHSFALM 8
T+HSF+L+
Sbjct: 363 TFHSFSLL 370




351|SequenceR|1760|1751|RTYEYTWHSF

>sp|RDRP_MPRVN|RNA-DIRECTED RNA polymerase VP2|Micromonas pusilla reovirus (isolate

Query: 1 RTYEYTWHSF 10
+ Y+Y WH F
Sbjct: 1188 KEYKYRWHPF 1197


>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)

Query: 3 YEYTWHS 9
YEY WH+
Sbjct: 742 YEYPWHT 748


>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean

Query: 3 YEYTWHS 9
YEY WH+
Sbjct: 742 YEYPWHT 748


>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo

Query: 3 YEYTWHS 9
YEY WH+
Sbjct: 741 YEYPWHT 747


>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee

Query: 3 YEYTWHS 9
YEY WH+
Sbjct: 742 YEYPWHT 748


>sp|YR405_MIMIV|PUTATIVE RNA methyltransferase R405|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 RTYEYTWHS 9
RT+E +W+S
Sbjct: 108 RTHEQSWYS 116


>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo

Query: 3 YEYTWHS 9
Y+Y WH+
Sbjct: 740 YQYPWHT 746


>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)

Query: 3 YEYTWHS 9
Y+Y WH+
Sbjct: 740 YQYPWHT 746


>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean

Query: 3 YEYTWHS 9
Y+Y WH+
Sbjct: 740 YQYPWHT 746


>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)

Query: 3 YEYTWHS 9
Y+Y WH+
Sbjct: 741 YQYPWHT 747


>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 5 YTWHSF 10
Y WH+F
Sbjct: 776 YLWHNF 781


>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 5 YTWHSF 10
Y WH+F
Sbjct: 776 YLWHNF 781


>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 5 YTWHSF 10
Y WH+F
Sbjct: 776 YLWHNF 781


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 1 RTYEYTWH 8
R Y TWH
Sbjct: 2816 REYSSTWH 2823


>sp|LTP_EHV1B|LARGE tegument protein deneddylase|Equine herpesvirus 1 (strain Ab4p)

Query: 1 RTYEYTWH 8
R Y TWH
Sbjct: 1960 REYGATWH 1967


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 1 RTYEYTWH 8
R Y TWH
Sbjct: 2816 REYSSTWH 2823


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 RTYEYTWH 8
R Y + WH
Sbjct: 2539 RLYSFFWH 2546


>sp|POLG_SPMMV|GENOME polyprotein|Sweet potato mild mottle virus

Query: 1 RTYEYTWHS 9
RT E+TW +
Sbjct: 3309 RTNEHTWRA 3317


>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)

Query: 4 EYTWHSF 10
E TWH+F
Sbjct: 970 EPTWHAF 976


>sp|DPOL_IIV3|DNA polymerase 120R|Invertebrate iridescent virus 3 (IIV-3)

Query: 3 YEYTWH 8
Y Y+WH
Sbjct: 16 YAYSWH 21


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 1 RTYEYTWH 8
RTY + W+
Sbjct: 2466 RTYNFLWY 2473


>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 4 EYTWHSF 10
E TWH+F
Sbjct: 968 EPTWHAF 974


>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)

Query: 4 EYTWHSF 10
E TWH+F
Sbjct: 989 EPTWHAF 995


>sp|YL111_MIMIV|UNCHARACTERIZED protein L111|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 EYTWHSF 10
EY WHS+
Sbjct: 293 EYQWHSY 299


>sp|DNBI_SHV21|MAJOR DNA-binding protein|Saimiriine herpesvirus 2 (strain 11)

Query: 5 YTWHSF 10
Y WH+F
Sbjct: 778 YLWHTF 783


>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)

Query: 4 EYTWHSF 10
E TWH+F
Sbjct: 969 EPTWHAF 975


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1 RTYEYTWH 8
RTY + W+
Sbjct: 2466 RTYNFLWY 2473


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 RTYEYTWH 8
R Y + WH
Sbjct: 2539 RLYSFFWH 2546


>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 3 YEYTW 7
+EYTW
Sbjct: 647 FEYTW 651


>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 3 YEYTW 7
+EYTW
Sbjct: 647 FEYTW 651




352|SequenceR|1765|1756|VLLEGRTYEY

>sp|VPN7_BPPHE|TAIL fiber protein|Enterococcus phage phiEF24C (Enterococcus bacteriophage

Query: 3 LEGRTYEY 10
+EG+TY Y
Sbjct: 1203 VEGKTYMY 1210




353|SequenceR|1770|1761|GQLDLVLLEG

***** No hits found ******


354|SequenceR|1775|1766|LNEGVGQLDL

>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain

Query: 3 EGVGQLDL 10
+GVG+LDL
Sbjct: 1235 KGVGELDL 1242


>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain

Query: 3 EGVGQLDL 10
+G+G+LDL
Sbjct: 1235 KGIGELDL 1242


>sp|VF423_ASFWA|UNCHARACTERIZED protein E423R|African swine fever virus (isolate

Query: 1 LNEGVGQLDL 10
LN+G +LDL
Sbjct: 133 LNQGKSKLDL 142


>sp|VF423_ASFP4|UNCHARACTERIZED protein E423R|African swine fever virus (isolate

Query: 1 LNEGVGQLDL 10
LN+G +LDL
Sbjct: 133 LNQGKSKLDL 142


>sp|VF423_ASFB7|UNCHARACTERIZED protein E423R|African swine fever virus (strain

Query: 1 LNEGVGQLDL 10
LN+G +LDL
Sbjct: 133 LNQGKSKLDL 142


>sp|VG75_EHV2|PROBABLE membrane antigen 75|Equine herpesvirus 2 (strain 86/87)

Query: 3 EGVGQLDL 10
+GVG LDL
Sbjct: 645 QGVGALDL 652


>sp|VF423_ASFK5|UNCHARACTERIZED protein E423R|African swine fever virus (isolate

Query: 1 LNEGVGQLDL 10
LN+G +LDL
Sbjct: 133 LNQGKSRLDL 142




355|SequenceR|1780|1771|VSPDTLNEGV

>sp|IE63_ALHV1|IMMEDIATE-EARLY phosphoprotein 57|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 VSPDTLNEGV 10
VSP+T N+G+
Sbjct: 420 VSPETSNKGL 429


>sp|YL268_MIMIV|PUTATIVE serine/threonine-protein kinase L268|Acanthamoeba polyphaga

Query: 1 VSPDTLNEGV 10
+SPD +NE V
Sbjct: 296 ISPDMVNEIV 305


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 3 PDTLNEG 9
P+T+NEG
Sbjct: 1420 PETVNEG 1426


>sp|VL2_HPV52|MINOR capsid protein L2|Human papillomavirus 52

Query: 1 VSPDTLNEGV 10
VSP T+N+G+
Sbjct: 350 VSPYTINDGL 359


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 2 SPDTLNEG 9
+PD +NEG
Sbjct: 1421 NPDLVNEG 1428


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 2 SPDTLNEG 9
+PD +NEG
Sbjct: 1421 NPDLVNEG 1428




356|SequenceR|1785|1776|EEAKIVSPDT

>sp|CAPSH_ADEB3|HEXON protein|Bovine adenovirus B serotype 3

Query: 1 EEAKIVSPDT 10
EEA +++PDT
Sbjct: 256 EEADVLTPDT 265


>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)

Query: 1 EEAKIVSPD 9
EEAK SPD
Sbjct: 266 EEAKWCSPD 274




357|SequenceR|1790|1781|DCSRKEEAKI

>sp|GLYCO_TUPVT|GLYCOPROTEIN virus (isolate Tupaia/Thailand/-/1986) (TUPV)

Query: 1 DCSRKEEAKI 10
DC+ +EAK+
Sbjct: 286 DCAETQEAKV 295


>sp|RPOA_LDVC|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 1 DCSRKE 6
DC+RKE
Sbjct: 2838 DCARKE 2843


>sp|DPOL_GPCMV|DNA polymerase|Guinea pig cytomegalovirus (strain 22122)

Query: 1 DCSRKEE 7
DC+RKE+
Sbjct: 1058 DCARKEK 1064


>sp|POL_EIAVY|POL polyprotein|Equine infectious anemia virus (strain

Query: 2 CSRKEEAK 9
CS+K EA+
Sbjct: 12 CSKKREAR 19


>sp|POL_EIAVC|POL polyprotein|Equine infectious anemia virus (isolate

Query: 2 CSRKEEAK 9
CS+K EA+
Sbjct: 12 CSKKREAR 19


>sp|POL_EIAV9|POL polyprotein|Equine infectious anemia virus (isolate

Query: 2 CSRKEEAK 9
CS+K EA+
Sbjct: 12 CSKKREAR 19




358|SequenceR|1795|1786|PGFVMDCSRK

>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 1 PGFVMDCS 8
PGF++D S
Sbjct: 1607 PGFILDSS 1614


>sp|VG43_ICHVA|UNCHARACTERIZED protein ORF43|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 FVMDCSRK 10
F DCSRK
Sbjct: 858 FEKDCSRK 865


>sp|L_PARVP|RNA-DIRECTED RNA polymerase L|Parana mammarenavirus (isolate

Query: 3 FVMDCSR 9
F+MDC +
Sbjct: 1864 FIMDCKK 1870


>sp|028R_IIV3|UNCHARACTERIZED protein 028R|Invertebrate iridescent virus 3 (IIV-3)

Query: 3 FVMDCSR 9
FV+DCS+
Sbjct: 194 FVVDCSQ 200


>sp|IBMP_SOCMV|TRANSACTIVATOR/VIROPLASMIN protein|Soybean chlorotic mottle virus

Query: 2 GFVMDCSRK 10
GF DCS++
Sbjct: 211 GFYPDCSKQ 219




359|SequenceR|1800|1791|EGLNAPGFVM

>sp|VG37_ICHVA|UNCHARACTERIZED protein ORF37|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 EGLNAPGFVM 10
+ LNAPG +M
Sbjct: 583 DSLNAPGVLM 592


>sp|NS1_PAVCN|INITIATOR protein NS1|Canine parvovirus type 2 (isolate

Query: 1 EGLNAPG 7
EG+N+PG
Sbjct: 572 EGINSPG 578


>sp|NS1_MEVA|INITIATOR protein NS1|Mink enteritis virus (strain Abashiri)

Query: 1 EGLNAPG 7
EG+N+PG
Sbjct: 572 EGVNSPG 578


>sp|NS1_FPV|INITIATOR protein NS1|Feline panleukopenia virus (FPV)

Query: 1 EGLNAPG 7
EG+N+PG
Sbjct: 296 EGVNSPG 302


>sp|NCAP_BC512|NUCLEOPROTEIN coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 EGLNAPGF 8
+G+NAPG+
Sbjct: 272 KGVNAPGY 279


>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 EGLNAPG 7
EG+N PG
Sbjct: 522 EGINLPG 528


>sp|CAPSD_EPMV|CAPSID protein|Eggplant mosaic virus

Query: 3 LNAPGF 8
+NAPGF
Sbjct: 14 INAPGF 19




360|SequenceR|1805|1796|NKIADEGLNA

>sp|DPOL_HBVOR|PROTEIN P|Orangutan hepatitis B virus (isolate

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVGO|PROTEIN P|Gorilla hepatitis B virus (isolate

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVGB|PROTEIN P|Gibbon hepatitis B virus subtype

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVCP|PROTEIN P|Chimpanzee hepatitis B virus (isolate

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1

Query: 2 KIADEGLN 9
++ADEGLN
Sbjct: 27 RLADEGLN 34


>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)

Query: 1 NKIADEGL 8
N+IA EGL
Sbjct: 460 NRIASEGL 467


>sp|VG12_ICHVA|PUTATIVE zinc-binding protein ORF12|Ictalurid herpesvirus 1 (strain

Query: 1 NKIADEGLNA 10
+K+A EGL+A
Sbjct: 53 SKVAPEGLDA 62


>sp|YR588_MIMIV|UNCHARACTERIZED protein R588|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 NKIADEGLN 9
NK+A+ GLN
Sbjct: 30 NKLANYGLN 38


>sp|TRM1_ELHVK|TRIPARTITE terminase subunit 1|Elephantid herpesvirus 1 (isolate Asian

Query: 1 NKIADEG 7
NK+AD+G
Sbjct: 449 NKVADKG 455




361|SequenceR|1810|1801|HKARFNKIAD

>sp|POLG_PYFV1|GENOME polyprotein|Parsnip yellow fleck virus (isolate

Query: 1 HKARFNKIA 9
H+A+FN +A
Sbjct: 133 HRAKFNYMA 141




362|SequenceR|1815|1806|CSNCHHKARF

>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 1 CSNCHHKARF 10
C NCHH A F
Sbjct: 1394 CKNCHHPANF 1403


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 1 CSNCHHKARF 10
C NCH A F
Sbjct: 1393 CKNCHQPANF 1402


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 1 CSNCHHKARF 10
C NCH A F
Sbjct: 1394 CKNCHQPANF 1403


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 1 CSNCHHKARF 10
C NCH A F
Sbjct: 1396 CKNCHQPANF 1405


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 1 CSNCHHKARF 10
C NCH A F
Sbjct: 1396 CKNCHQPANF 1405


>sp|VF050_IIV3|UNCHARACTERIZED protein 094L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 CSNCHHK 7
C+ CHHK
Sbjct: 402 CTQCHHK 408


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 4 CHHKARF 10
CHHK R+
Sbjct: 927 CHHKDRY 933


>sp|MTBP_BPPHT|ORPHAN methyltransferase M.Phi3TI|Bacillus phage phi3T (Bacteriophage

Query: 1 CSNCHHK 7
CSNC H+
Sbjct: 94 CSNCSHE 100


>sp|MTBB_BPSPB|ORPHAN methyltransferase M.SPBetaI|Bacillus phage SPbeta (Bacillus phage

Query: 1 CSNCHHK 7
CSNC H+
Sbjct: 94 CSNCSHE 100


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 1 CSNCH 5
CSNCH
Sbjct: 1062 CSNCH 1066


>sp|STXA_BPH30|SHIGA-LIKE toxin 1 subunit A|Bacteriophage H30

Query: 3 NCHHKA 8
NCHH A
Sbjct: 263 NCHHHA 268


>sp|STXA_BPH19|SHIGA-LIKE toxin 1 subunit A|Enterobacteria phage H19B (Bacteriophage H19B)

Query: 3 NCHHKA 8
NCHH A
Sbjct: 263 NCHHHA 268


>sp|STXA_BP788|SHIGA toxin subunit A|Shigella phage 7888 (Shigella sonnei

Query: 3 NCHHKA 8
NCHH A
Sbjct: 263 NCHHHA 268


>sp|HELI1_HVAVE|PUTATIVE ATP-dependent RNA helicase|Heliothis virescens ascovirus 3e

Query: 3 NCHHKARF 10
NC++++RF
Sbjct: 126 NCYYRSRF 133


>sp|POLB_CHPVU|ORFB polyprotein|Cryphonectria hypovirus 1 (strain Euro7)

Query: 2 SNCHHKAR 9
SN HHK R
Sbjct: 2092 SNVHHKNR 2099


>sp|POLB_CHPVE|ORFB polyprotein|Cryphonectria hypovirus 1 (strain EP713)

Query: 2 SNCHHKAR 9
SN HHK R
Sbjct: 2093 SNVHHKNR 2100


>sp|POLG_FMDS2|GENOME polyprotein|Foot-and-mouth disease virus serotype SAT-2

Query: 5 HHKARF 10
HHKA+F
Sbjct: 618 HHKAKF 623


>sp|Y102_AFV1Y|UNCHARACTERIZED protein ORF102|Acidianus filamentous virus 1 (isolate

Query: 1 CSNCHH 6
CS+C+H
Sbjct: 56 CSDCYH 61


>sp|LTP_ALHV1|LARGE tegument protein deneddylase|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 CSNCHHKAR 9
CSN KAR
Sbjct: 1962 CSNSQEKAR 1970


>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 1 CSNCHH 6
CS CHH
Sbjct: 344 CSYCHH 349


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 1 CSNCHH 6
CS CHH
Sbjct: 344 CSYCHH 349


>sp|NRDEB_BPSPB|RIBONUCLEOSIDE-DIPHOSPHATE reductase nrdEB subunit alpha|Bacillus phage SPbeta (Bacillus phage

Query: 1 CSNCHHKAR 9
C N +HKA+
Sbjct: 620 CVNANHKAK 628


>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)

Query: 2 SNCHHKARF 10
SN HHK F
Sbjct: 315 SNLHHKELF 323


>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])

Query: 2 SNCHHKARF 10
SN HHK F
Sbjct: 315 SNLHHKELF 323


>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])

Query: 2 SNCHHKARF 10
SN HHK F
Sbjct: 315 SNLHHKELF 323


>sp|YL615_MIMIV|PUTATIVE phosphatidylinositol kinase L615|Acanthamoeba polyphaga mimivirus

Query: 1 CSNCHHKAR 9
C NC++K +
Sbjct: 107 CDNCYYKVK 115


>sp|STXA_BP933|SHIGA-LIKE toxin 2 subunit A|Escherichia phage 933W (Bacteriophage 933W)

Query: 3 NCHHKA 8
NCHH+
Sbjct: 262 NCHHQG 267


>sp|VP3_ROTEL|PROTEIN VP3|Rotavirus A (isolate RVA/Equine/United

Query: 2 SNCHHKARF 10
SN HHK F
Sbjct: 315 SNMHHKELF 323


>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)

Query: 1 CSNCHH 6
CS CHH
Sbjct: 344 CSYCHH 349


>sp|YL862_MIMIV|UNCHARACTERIZED protein L862|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 NCHHKARF 10
NC HK F
Sbjct: 82 NCTHKEEF 89


>sp|Y004_NPVOP|UNCHARACTERIZED 16.2 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 CSNCHHKA 8
C NCH A
Sbjct: 86 CQNCHAMA 93


>sp|POL_COYMV|POLYPROTEIN P3|Commelina yellow mottle virus (CoYMV)

Query: 3 NCHH 6
NCHH
Sbjct: 1004 NCHH 1007


>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1 CSNCHH 6
CSNC H
Sbjct: 343 CSNCGH 348


>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1 CSNCHH 6
CSNC H
Sbjct: 343 CSNCGH 348


>sp|LEF11_NPVST|LATE expression factor 11|Spodoptera litura multicapsid

Query: 4 CHHKARF 10
CHH+AR
Sbjct: 71 CHHRARI 77


>sp|TOP2_ASFK5|DNA topoisomerase 2|African swine fever virus (isolate

Query: 3 NCHHKAR 9
NCH+K +
Sbjct: 517 NCHYKTQ 523


>sp|ENV_FIVPE|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (isolate Petaluma)

Query: 2 SNCHHKARF 10
SN H +ARF
Sbjct: 450 SNLHTEARF 458


>sp|TOP2_ASFM2|DNA topoisomerase 2|African swine fever virus (isolate

Query: 3 NCHHKAR 9
NCH+K +
Sbjct: 516 NCHYKTQ 522


>sp|TOP2_ASFB7|DNA topoisomerase 2|African swine fever virus (strain

Query: 3 NCHHKAR 9
NCH+K +
Sbjct: 517 NCHYKTQ 523


>sp|1A_OLV2I|REPLICATION protein 1a|Olive latent virus 2 (isolate

Query: 4 CHHKA 8
CHH+A
Sbjct: 160 CHHRA 164


>sp|TOP2_ASFWA|DNA topoisomerase 2|African swine fever virus (isolate

Query: 3 NCHHKAR 9
NCH+K +
Sbjct: 517 NCHYKTQ 523


>sp|TOP2_ASFP4|DNA topoisomerase 2|African swine fever virus (isolate

Query: 3 NCHHKAR 9
NCH+K +
Sbjct: 517 NCHYKTQ 523


>sp|REGQ_BPPS3|ANTITERMINATION protein Q|Bacteriophage PS34

Query: 1 CSNCHHKAR 9
C NCH R
Sbjct: 118 CRNCHGTGR 126


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3 NCHHKA 8
NC HKA
Sbjct: 6710 NCKHKA 6715




363|SequenceR|1820|1811|KLKRCCSNCH

>sp|Y004_NPVOP|UNCHARACTERIZED 16.2 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 4 RCCSNCH 10
R C NCH
Sbjct: 84 RVCQNCH 90


>sp|RPB1_FRG3G|PUTATIVE DNA-directed RNA polymerase 008R|Frog virus 3 (isolate Goorha)

Query: 2 LKRCCSNC 9
LKRCC C
Sbjct: 95 LKRCCHVC 102


>sp|TEG7_HHV6Z|TEGUMENT protein UL51 homolog|Human herpesvirus 6B (strain Z29)

Query: 2 LKRCCSNC 9
++RC SNC
Sbjct: 89 MERCLSNC 96


>sp|DNBI_TUHV2|MAJOR DNA-binding protein|Tupaiid herpesvirus (strain 2) (TuHV-2)

Query: 4 RCCSNCH 10
RCC +C+
Sbjct: 480 RCCQSCY 486


>sp|DNBI_MUHVS|MAJOR DNA-binding protein|Murid herpesvirus 1 (strain Smith)

Query: 4 RCCSNCH 10
RCC C+
Sbjct: 479 RCCHTCY 485


>sp|VF050_IIV3|UNCHARACTERIZED protein 094L|Invertebrate iridescent virus 3 (IIV-3)

Query: 5 CCSNCH 10
CC+ CH
Sbjct: 401 CCTQCH 406


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 5 CCSNC 9
CC NC
Sbjct: 1099 CCKNC 1103


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 5 CCSNC 9
CC NC
Sbjct: 1099 CCKNC 1103


>sp|TEG7_HHV6U|TEGUMENT protein UL51 homolog|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 LKRCCSNC 9
++RC SNC
Sbjct: 81 MERCLSNC 88


>sp|YR703_MIMIV|UNCHARACTERIZED protein R703|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 KLKRCCSNCH 10
K+K+ CSN H
Sbjct: 126 KIKKMCSNNH 135


>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)

Query: 3 KRCCSNC 9
K+C SNC
Sbjct: 21 KQCMSNC 27


>sp|TGB2_CVB|MOVEMENT protein TGB2|Chrysanthemum virus B (CVB)

Query: 3 KRCCSNCH 10
+R C CH
Sbjct: 99 RRVCGQCH 106


>sp|POLG_PESV|GENOME polyprotein|Porcine enteric sapovirus (isolate Swine/United

Query: 1 KLKRCC 6
KLK CC
Sbjct: 402 KLKECC 407


>sp|L_LNYV3|RNA-DIRECTED RNA polymerase L|Lettuce necrotic yellows virus (isolate

Query: 2 LKRCCSN 8
L++CCS+
Sbjct: 1591 LRKCCSS 1597


>sp|UL133_HCMVM|PROTEIN UL133|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 RCCSNCH 10
RCCS C+
Sbjct: 104 RCCSACY 110


>sp|UL78_HCMVM|PROTEIN UL78|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 LKRCCSNCH 10
++RC +CH
Sbjct: 315 VERCQQSCH 323


>sp|UL78_HCMVA|UNCHARACTERIZED protein UL78|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 LKRCCSNCH 10
++RC +CH
Sbjct: 315 VERCQQSCH 323


>sp|VINT_BPHC1|INTEGRASE phage HP1 (strain HP1c1)

Query: 1 KLKRCCSN 8
KLK CSN
Sbjct: 86 KLKNLCSN 93


>sp|VE1_BPV3|REPLICATION protein E1|Bovine papillomavirus type 3

Query: 3 KRCCSN 8
K CCSN
Sbjct: 194 KTCCSN 199


>sp|SYY_MIMIV|TYROSINE--TRNA ligase|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 KLKRCC 6
++KRCC
Sbjct: 146 RVKRCC 151


>sp|MYC_AVIMD|VIRAL myc transforming protein|Avian myelocytomatosis virus HBI

Query: 2 LKRCCSNCH 10
LKRC N H
Sbjct: 274 LKRCQVNIH 282


>sp|YL615_MIMIV|PUTATIVE phosphatidylinositol kinase L615|Acanthamoeba polyphaga mimivirus

Query: 3 KRCCSNCH 10
+R C NC+
Sbjct: 104 ERVCDNCY 111


>sp|MYC_AVIMC|VIRAL myc transforming protein|Avian myelocytomatosis virus 29 (Avian

Query: 2 LKRCCSNCH 10
LKRC N H
Sbjct: 274 LKRCHVNIH 282


>sp|MYC_AVIOK|VIRAL myc transforming protein|Avian retrovirus OK10

Query: 2 LKRCCSNCH 10
LKRC N H
Sbjct: 274 LKRCHVNIH 282


>sp|MYC_AVIM2|VIRAL myc transforming protein|Avian myelocytomatosis virus CMII

Query: 2 LKRCCSNCH 10
LKRC N H
Sbjct: 274 LKRCHVNIH 282


>sp|GLYCO_TUPVT|GLYCOPROTEIN virus (isolate Tupaia/Thailand/-/1986) (TUPV)

Query: 1 KLKRCCSNCH 10
KLK CC +
Sbjct: 172 KLKTCCKTIY 181


>sp|TEG7_HHV7J|TEGUMENT protein UL51 homolog|Human herpesvirus 7 (strain JI)

Query: 2 LKRCCSNC 9
++RC +NC
Sbjct: 79 IERCLNNC 86




364|SequenceR|1825|1816|KLDPLKLKRC

>sp|NEEDL_BPT4|PRE-BASEPLATE central spike protein Gp5|Enterobacteria phage T4 (Bacteriophage

Query: 1 KLDPLKLKR 9
++DPLKL R
Sbjct: 18 RMDPLKLGR 26


>sp|RDRP_FXMV|RNA replication protein|Foxtail mosaic virus

Query: 3 DPLKLKRC 10
DP+KL+ C
Sbjct: 1248 DPMKLQHC 1255


>sp|CAP6_ADEM1|PRE-PROTEIN VI|Murine adenovirus A serotype 1

Query: 2 LDPLKLKRC 10
L P+K +RC
Sbjct: 228 LQPIKRRRC 236


>sp|YL279_MIMIV|PUTATIVE ankyrin repeat protein L279|Acanthamoeba polyphaga mimivirus

Query: 2 LDPLKLKRC 10
LDP K RC
Sbjct: 48 LDPSKSARC 56


>sp|REP1_MVDC1|PARA-REP C1|Milk vetch dwarf C1 alphasatellite

Query: 3 DPLKLKRC 10
DP K +RC
Sbjct: 122 DPAKARRC 129




365|SequenceR|1830|1821|TYDNRKLDPL

>sp|RDRP_OUMVV|RNA-DEPENDENT RNA polymerase|Ourmia melon virus (isolate Melon/Iran/VE9)

Query: 3 DNRKLDPL 10
DNR LDP+
Sbjct: 435 DNRPLDPV 442


>sp|CAPSD_BPPRD|MAJOR capsid protein P3|Enterobacteria phage PRD1 (Bacteriophage PRD1)

Query: 3 DNRKLDP 9
D RKLDP
Sbjct: 315 DTRKLDP 321


>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)

Query: 1 TYDNRKLDP 9
T+DNR+L P
Sbjct: 2 THDNRQLLP 10


>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 TYDNRKLDP 9
T+DNR+L P
Sbjct: 2 THDNRQLLP 10


>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)

Query: 1 TYDNRKLDPL 10
TY +R+L+PL
Sbjct: 268 TYLSRRLNPL 277


>sp|CARG2_BPCA1|CARGO protein 2|Bacteroides phage crAss001 (Bacteroides phage

Query: 3 DNRKLDPL 10
DNRK DP+
Sbjct: 428 DNRKGDPI 435


>sp|VL2_HPV61|MINOR capsid protein L2|Human papillomavirus type 61

Query: 1 TYDNRKLDP 9
TYDN DP
Sbjct: 247 TYDNPIFDP 255


>sp|VP1_AQRVG|OUTER capsid protein VP1|Aquareovirus G (isolate American grass

Query: 1 TYDNRKLDPL 10
TY NR ++PL
Sbjct: 107 TYANRFVNPL 116




366|SequenceR|1835|1826|IIKDPTYDNR

>sp|REL_AVIRE|TRANSFORMING protein rel polyprotein|Avian reticuloendotheliosis virus

Query: 1 IIKDPTYDNR 10
+I +P YDNR
Sbjct: 178 LISNPIYDNR 187


>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 5 PTYDNR 10
PTYD+R
Sbjct: 479 PTYDSR 484


>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 5 PTYDNR 10
PTYD+R
Sbjct: 479 PTYDSR 484


>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 5 PTYDNR 10
PTYD+R
Sbjct: 479 PTYDSR 484


>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 KDPTYD 8
+DPTYD
Sbjct: 729 EDPTYD 734


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 3 KDPTYD 8
KDPTY+
Sbjct: 2310 KDPTYE 2315


>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 KDPTYD 8
+DPTYD
Sbjct: 728 EDPTYD 733


>sp|PORTL_BPSP1|PROBABLE portal protein|Bacillus phage SP01 (Bacteriophage SP01)

Query: 1 IIKDPTYDN 9
I+ DPTY N
Sbjct: 459 IVLDPTYTN 467


>sp|SPIKE_BCHK9|SPIKE glycoprotein|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 4 DPTYDN 9
DP YDN
Sbjct: 683 DPLYDN 688


>sp|RDRP_ESRV9|RNA-DIRECTED RNA polymerase|Eriocheir sinensis reovirus (isolate China/905)

Query: 1 IIKDPTY 7
++KDPTY
Sbjct: 292 LMKDPTY 298




367|SequenceR|1840|1831|EDQPFIIKDP

>sp|SIGM2_REOVL|INNER capsid protein sigma-2|Reovirus type 1 (strain Lang)

Query: 1 EDQPFIIKDP 10
+D PF+ +DP
Sbjct: 128 DDYPFLARDP 137


>sp|SIGM2_REOVJ|INNER capsid protein sigma-2|Reovirus type 2 (strain D5/Jones)

Query: 1 EDQPFIIKDP 10
+D PF+ +DP
Sbjct: 128 DDYPFLARDP 137


>sp|SIGM2_REOVD|INNER capsid protein sigma-2|Reovirus type 3 (strain Dearing)

Query: 1 EDQPFIIKDP 10
+D PF+ +DP
Sbjct: 128 DDYPFLARDP 137


>sp|NS8_BCHK3|NON-STRUCTURAL protein 8|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 1 EDQPFIIKDP 10
E+QP+ I+DP
Sbjct: 27 ENQPYQIEDP 36


>sp|L_SENDO|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Ohita) (SeV)

Query: 2 DQPFIIKD 9
+QP+I+KD
Sbjct: 39 NQPYILKD 46


>sp|L_SENDA|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Hamamatsu) (SeV)

Query: 2 DQPFIIKD 9
+QP+I+KD
Sbjct: 39 NQPYILKD 46


>sp|NS8_BCRP3|NON-STRUCTURAL protein 8|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 1 EDQPFIIKDP 10
E+QP+ I+DP
Sbjct: 27 ENQPYQIEDP 36


>sp|NS8_BC279|NON-STRUCTURAL protein 8|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 1 EDQPFIIKDP 10
E+QP+ I+DP
Sbjct: 27 ENQPYQIEDP 36


>sp|RDRP_BSMV|RNA-DIRECTED RNA polymerase|Barley stripe mosaic virus (BSMV)

Query: 2 DQPFIIKDP 10
DQ +II DP
Sbjct: 630 DQGYIISDP 638


>sp|SCP_HHV2H|SMALL capsomere-interacting protein|Human herpesvirus 2 (strain HG52)

Query: 4 PFIIKDP 10
PF+++DP
Sbjct: 100 PFVVRDP 106


>sp|DPOL_HIS1I|DNA polymerase|His1 virus (isolate Australia/Victoria) (His1V)

Query: 1 EDQPFIIKD 9
E QPF +KD
Sbjct: 380 EIQPFAVKD 388


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 2 DQPFIIKD 9
D+PF +KD
Sbjct: 1504 DRPFEVKD 1511


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 2 DQPFIIKD 9
D+PF +KD
Sbjct: 1504 DRPFEVKD 1511


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 2 DQPFIIKD 9
D+PF +KD
Sbjct: 1504 DRPFEVKD 1511


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 2 DQPFIIKD 9
D+PF +KD
Sbjct: 1504 DRPFEVKD 1511


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 2 DQPFIIKD 9
D+PF +KD
Sbjct: 1504 DRPFEVKD 1511


>sp|NS8_SARS2|ORF8 protein|Severe acute respiratory syndrome coronavirus

Query: 1 EDQPFIIKDP 10
+ QP+++ DP
Sbjct: 27 QHQPYVVDDP 36


>sp|Y095_OSHVF|UNCHARACTERIZED protein ORF95|Ostreid herpesvirus 1 (isolate France)

Query: 4 PFIIKDP 10
PFI+ DP
Sbjct: 136 PFILDDP 142


>sp|VS48_TBRVS|SATELLITE RNA 48 kDa protein|Tomato black ring virus satellite

Query: 3 QPFIIKDP 10
QPF+ DP
Sbjct: 182 QPFVANDP 189


>sp|YL167_MIMIV|UNCHARACTERIZED protein L167|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 QPFIIKDP 10
+PFI+ DP
Sbjct: 154 RPFILSDP 161




368|SequenceR|1845|1836|NLDSPEDQPF

>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 1 NLDSPEDQPF 10
+LD EDQPF
Sbjct: 655 HLDDVEDQPF 664


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 1 NLDSPEDQPF 10
+LD EDQPF
Sbjct: 655 HLDDVEDQPF 664


>sp|REP_BPHC1|REPLICATION protein|Haemophilus phage HP1 (strain HP1c1)

Query: 1 NLDSPEDQ 8
N+D+PE+Q
Sbjct: 348 NIDNPEEQ 355


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 1 NLDSPEDQP 9
N+D+PE P
Sbjct: 408 NVDTPESSP 416


>sp|CAPSD_BPE32|MAJOR capsid protein|Escherichia phage Phieco32 (Escherichia coli

Query: 4 SPEDQPF 10
SP+D PF
Sbjct: 27 SPQDTPF 33


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 1 NLDSPEDQP 9
N+D+PE P
Sbjct: 408 NVDTPESSP 416


>sp|VG48_ICHVA|UNCHARACTERIZED protein ORF48|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 LDSPEDQP 9
LD+P +QP
Sbjct: 40 LDTPAEQP 47


>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57

Query: 1 NLDSPEDQ 8
+L+SPEDQ
Sbjct: 615 DLNSPEDQ 622


>sp|CPM_LIYV9|MINOR capsid protein|Lettuce infectious yellows virus (isolate

Query: 2 LDSPEDQP 9
+D PED+P
Sbjct: 219 VDKPEDKP 226


>sp|P4H_MIMIV|PUTATIVE prolyl 4-hydroxylase|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 NLDSPEDQPF 10
N+D P ++PF
Sbjct: 52 NIDDPYNKPF 61


>sp|VP2_ROTPC|INNER capsid protein VP2|Rotavirus C (strain RVC/Pig/United

Query: 1 NLDSPED 7
N+DSP+D
Sbjct: 47 NVDSPKD 53




369|SequenceR|1850|1841|NGPQLNLDSP

>sp|VF407_ASFB7|UNCHARACTERIZED protein B407L|African swine fever virus (strain

Query: 1 NGPQLNLDSP 10
N P+ +LDSP
Sbjct: 65 NDPEFSLDSP 74


>sp|VP7_ROTB9|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 1 NGPQLNLD 8
N PQLN D
Sbjct: 132 NNPQLNCD 139


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 2 GPQLNLDSP 10
GP+LN D P
Sbjct: 701 GPKLNQDMP 709


>sp|VP7_ROTA1|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 1 NGPQLNLD 8
N PQLN D
Sbjct: 132 NDPQLNCD 139


>sp|YL574_MIMIV|UNCHARACTERIZED protein L574|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 PQLNLDSP 10
PQ+N D+P
Sbjct: 100 PQINSDNP 107


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 1 NGPQLNLDSP 10
+GP L LD P
Sbjct: 573 HGPWLTLDEP 582


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 1 NGPQLNLDSP 10
+GP L LD P
Sbjct: 573 HGPWLTLDEP 582


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 1 NGPQLNLDSP 10
+GP L LD P
Sbjct: 573 HGPWLTLDEP 582


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 1 NGPQLNLDSP 10
+GP L LD P
Sbjct: 573 HGPWLTLDEP 582


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 1 NGPQLNLDSP 10
+GP L LD P
Sbjct: 573 HGPWLTLDEP 582


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 1 NGPQLNLDSP 10
+GP L LD P
Sbjct: 573 HGPWLTLDEP 582


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 1 NGPQLNLDSP 10
+GP L LD P
Sbjct: 573 HGPWLTLDEP 582


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 1 NGPQLNLDSP 10
+GP L LD P
Sbjct: 573 HGPWLTLDEP 582


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 2 GPQLNLDSP 10
GP L LD P
Sbjct: 574 GPWLTLDEP 582




370|SequenceR|1855|1846|SEKTSNGPQL

***** No hits found ******


371|SequenceR|1865|1851|LMLRVSNTSESEKTS

>sp|TRM3_SHV21|TRIPARTITE terminase subunit 3|Saimiriine herpesvirus 2 (strain 11)

Query: 5 VSNTSESEKTS 15
++NTS+SE+T+
Sbjct: 34 ITNTSKSERTA 44




372|SequenceR|1865|1856|LMLRVSNTSE

***** No hits found ******


THE END