TRPM7_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|TSEIWSKQSM

>sp|NADE_HALSA|NH(3)-DEPENDENT NAD(+) synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 1 TSEIWSKQS 9
T+E+W+ Q+
Sbjct: 200 TAELWADQT 208


>sp|NADE_HALS3|NH(3)-DEPENDENT NAD(+) synthetase|Halobacterium salinarum (strain ATCC 29341

Query: 1 TSEIWSKQS 9
T+E+W+ Q+
Sbjct: 200 TAELWADQT 208


>sp|RL3_METVS|LARGE ribosomal subunit protein uL3|Methanococcus vannielii (strain ATCC

Query: 2 SEIWSKQ 8
+E+W+KQ
Sbjct: 99 TEVWAKQ 105


>sp|RL3_METVA|LARGE ribosomal subunit protein uL3|Methanococcus vannielii

Query: 2 SEIWSKQ 8
+E+W+KQ
Sbjct: 99 TEVWAKQ 105




2|SequenceR|15|6|ERKTLTSEIW

>sp|SAHH_PYRAB|ADENOSYLHOMOCYSTEINASE abyssi (strain GE5 /

Query: 1 ERKTLTSEIW 10
ERK L EIW
Sbjct: 140 ERKELLDEIW 149


>sp|GUAAB_SACI7|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 ERKTLTSEI 9
ER+T TSEI
Sbjct: 83 ERETFTSEI 91


>sp|GUAAB_SACI6|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 ERKTLTSEI 9
ER+T TSEI
Sbjct: 83 ERETFTSEI 91


>sp|GUAAB_SACI4|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 ERKTLTSEI 9
ER+T TSEI
Sbjct: 83 ERETFTSEI 91


>sp|GUAAB_SACI3|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 ERKTLTSEI 9
ER+T TSEI
Sbjct: 83 ERETFTSEI 91


>sp|GUAAB_SACI1|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 ERKTLTSEI 9
ER+T TSEI
Sbjct: 83 ERETFTSEI 91


>sp|GUAAB_SACI2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 ERKTLTSEI 9
ER+T TSEI
Sbjct: 83 ERETFTSEI 91


>sp|SAHH_THEKO|ADENOSYLHOMOCYSTEINASE kodakarensis (strain ATCC BAA-918

Query: 1 ERKTLTSEIW 10
ER+ L EIW
Sbjct: 139 ERQELIPEIW 148


>sp|SAHH_PYRHO|ADENOSYLHOMOCYSTEINASE horikoshii (strain ATCC 700860

Query: 1 ERKTLTSEIW 10
ER+ L EIW
Sbjct: 139 ERQELLDEIW 148


>sp|ENO2_METHJ|ENOLASE 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 ERKTLTSE 8
E+K LTSE
Sbjct: 259 EKKVLTSE 266


>sp|SAHH_PYRFU|ADENOSYLHOMOCYSTEINASE furiosus (strain ATCC 43587

Query: 1 ERKTLTSEIW 10
ER+ + EIW
Sbjct: 139 ERQEMLDEIW 148


>sp|NIFE_METTM|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 2 RKTLTSEIW 10
++TL S IW
Sbjct: 454 KRTLESPIW 462


>sp|MEND_HALWD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 5 LTSEIW 10
LTSE+W
Sbjct: 285 LTSELW 290




3|SequenceR|20|11|IIYVCERKTL

>sp|COBQ_METAR|PROBABLE cobyric acid synthase|Methanocella arvoryzae (strain DSM 22066

Query: 3 YVCERKTL 10
Y CERK L
Sbjct: 442 YACERKGL 449


>sp|RIFK_PYRCJ|RIBOFLAVIN kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 CERKTL 10
CERKTL
Sbjct: 6 CERKTL 11


>sp|SEPS_METAR|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocella arvoryzae (strain DSM 22066

Query: 4 VCERKTL 10
VC RKTL
Sbjct: 179 VCSRKTL 185


>sp|COBQ_METAC|PROBABLE cobyric acid synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 YVCERKTL 10
Y+CE+K L
Sbjct: 442 YLCEKKGL 449


>sp|DHQS_KORCO|3-DEHYDROQUINATE synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 IIYVCERK 8
++YV ERK
Sbjct: 312 LVYVSERK 319




4|SequenceR|25|16|DKSSPIIYVC

>sp|GCH3_METVS|GTP cyclohydrolase III|Methanococcus vannielii (strain ATCC 35089

Query: 2 KSSPIIYVC 10
KSSP Y+C
Sbjct: 256 KSSPYNYMC 264


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 5 PIIYVC 10
P+IY+C
Sbjct: 105 PVIYLC 110


>sp|FTSY_THEAC|SIGNAL recognition particle receptor FtsY|Thermoplasma acidophilum (strain

Query: 1 DKSSPIIYVC 10
D P+++VC
Sbjct: 250 DLKKPVLFVC 259


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DKSSPIIYV 9
D+S P IYV
Sbjct: 198 DESDPSIYV 206


>sp|NK_THEAC|NUCLEOSIDE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DKSSPIIYV 9
D+S PI Y+
Sbjct: 87 DESGPICYI 95


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DKSSPIIYV 9
DK P IYV
Sbjct: 200 DKEDPSIYV 208


>sp|BAT_HALSA|BACTERIOOPSIN transcriptional activator|Halobacterium salinarum (strain ATCC

Query: 1 DKSSPIIYV 9
D PIIY+
Sbjct: 178 DPEEPIIYI 186


>sp|Y1069_METJA|UNCHARACTERIZED glycosyltransferase MJ1069|Methanocaldococcus jannaschii (strain

Query: 1 DKSSPIIY 8
DK PIIY
Sbjct: 181 DKDIPIIY 188


>sp|HIS2_META3|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DKSSPIIYVC 10
DK +PI +C
Sbjct: 31 DKKTPINKIC 40


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM 14266

Query: 1 DKSSPIIY 8
DK++PII+
Sbjct: 122 DKNTPIIW 129


>sp|RS24_METM7|SMALL ribosomal subunit protein eS24|Methanococcus maripaludis (strain

Query: 1 DKSSPIIY 8
DK++P++Y
Sbjct: 8 DKNNPLLY 15


>sp|RS24_METM6|SMALL ribosomal subunit protein eS24|Methanococcus maripaludis (strain

Query: 1 DKSSPIIY 8
DK++P++Y
Sbjct: 8 DKNNPLLY 15




5|SequenceR|30|21|LCRHPDKSSP

>sp|HIS5_METKA|IMIDAZOLE glycerol phosphate synthase subunit|Methanopyrus kandleri (strain

Query: 4 HPDKSSP 10
HP+KS P
Sbjct: 179 HPEKSGP 185


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LCRHPD 6
LC HPD
Sbjct: 331 LCMHPD 336


>sp|PYRB_NATPD|ASPARTATE carbamoyltransferase catalytic subunit|Natronomonas pharaonis

Query: 3 RHPDKSSP 10
RHP + SP
Sbjct: 103 RHPSEGSP 110


>sp|RNP3_HALS3|RIBONUCLEASE P protein component 3|Halobacterium salinarum (strain ATCC 29341

Query: 1 LCRHPDKSS 9
+C HPD S
Sbjct: 5 VCAHPDGDS 13


>sp|TRUD_THEVO|PROBABLE tRNA pseudouridine synthase D|Thermoplasma volcanium (strain ATCC

Query: 4 HPDKSSP 10
+PDKS P
Sbjct: 284 NPDKSKP 290


>sp|Y1601_METJA|UNCHARACTERIZED protein MJ1601|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 HPDKSS 9
HPDK S
Sbjct: 119 HPDKES 124


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 2 CRHPDK 7
C HP+K
Sbjct: 19 CSHPEK 24


>sp|HIS5_SULTO|IMIDAZOLE glycerol phosphate synthase subunit|Sulfurisphaera tokodaii (strain

Query: 4 HPDKSS 9
HP+KSS
Sbjct: 175 HPEKSS 180


>sp|HIS5_SULAC|IMIDAZOLE glycerol phosphate synthase subunit|Sulfolobus acidocaldarius

Query: 4 HPDKSS 9
HP+KSS
Sbjct: 178 HPEKSS 183


>sp|HIS5_SACS2|IMIDAZOLE glycerol phosphate synthase subunit|Saccharolobus solfataricus

Query: 4 HPDKSS 9
HP+KSS
Sbjct: 178 HPEKSS 183


>sp|HIS5_PYRFU|IMIDAZOLE glycerol phosphate synthase subunit|Pyrococcus furiosus (strain

Query: 4 HPDKSS 9
HP+KSS
Sbjct: 176 HPEKSS 181


>sp|COFC_HALMA|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LCRHPD 6
+CRHP+
Sbjct: 126 VCRHPE 131




6|SequenceR|35|26|IQCGPLCRHP

>sp|EF2_METTP|ELONGATION factor 2|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 IQCGPLCRHP 10
I GP+CR P
Sbjct: 568 ITAGPICREP 577


>sp|Y989_METJA|UNCHARACTERIZED protein MJ0989|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CGPLCR 8
CGP C+
Sbjct: 75 CGPCCK 80


>sp|IF2P_METB6|PROBABLE translation initiation factor IF-2|Methanoregula boonei (strain DSM

Query: 2 QCGPLCRH 9
Q GP+ RH
Sbjct: 381 QVGPVSRH 388


>sp|EF2_METTE|ELONGATION factor 2|Methanosarcina thermophila

Query: 1 IQCGPLCRHP 10
++ GPL R P
Sbjct: 568 MRAGPLTREP 577


>sp|EF2_METMA|ELONGATION factor 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IQCGPLCRHP 10
++ GPL R P
Sbjct: 568 MRAGPLTREP 577


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 IQCGPLCRHP 10
++ GPL R P
Sbjct: 568 MRAGPLTREP 577


>sp|EF2_METAC|ELONGATION factor 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IQCGPLCRHP 10
++ GPL R P
Sbjct: 568 MRAGPLTREP 577


>sp|FLUC1_NATPD|FLUORIDE-SPECIFIC ion channel FluC 1|Natronomonas pharaonis (strain ATCC 35678

Query: 4 GPLCRH 9
G LCRH
Sbjct: 16 GALCRH 21


>sp|AROA_METHJ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 2 QCGPLC 7
+CGP+C
Sbjct: 7 RCGPVC 12


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 1 IQCGPLCR 8
++CGP R
Sbjct: 671 VECGPAVR 678


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 1 IQCGPLCR 8
++CGP R
Sbjct: 671 VECGPAVR 678


>sp|SEPS_METMJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 CGPLC 7
CGP C
Sbjct: 419 CGPAC 423


>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IQCGPLCRHP 10
+ CG HP
Sbjct: 615 VNCGKTVNHP 624


>sp|ABLA_METMA|L-LYSINE 2,3-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 QCGPLCRH 9
+CG CRH
Sbjct: 125 RCGMYCRH 132


>sp|SEPS_METB6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoregula boonei (strain DSM 21154

Query: 3 CGPLC 7
CGP C
Sbjct: 442 CGPAC 446


>sp|RNP4_PYRAB|RIBONUCLEASE P protein component 4|Pyrococcus abyssi (strain GE5 /

Query: 1 IQCGPLCRHP 10
++CG + R+P
Sbjct: 94 LECGHIMRYP 103


>sp|RNP4_THESM|RIBONUCLEASE P protein component 4|Thermococcus sibiricus (strain DSM 12597

Query: 1 IQCGPLCRHP 10
++CG + R+P
Sbjct: 97 LECGHIMRYP 106




7|SequenceR|40|31|VLQQCIQCGP

>sp|THRC_METJA|THREONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VLQQCIQCG 9
+LQ+CI+CG
Sbjct: 1 MLQRCIKCG 9


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 QQCIQCG 9
+QCI+CG
Sbjct: 21 KQCIKCG 27


>sp|HDRC1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit C|Methanosarcina acetivorans

Query: 2 LQQCIQCG 9
L +CIQCG
Sbjct: 38 LDRCIQCG 45


>sp|TYW1_METJA|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Methanocaldococcus jannaschii

Query: 3 QQCIQCGP 10
+CIQC P
Sbjct: 50 HRCIQCTP 57


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 QQCIQCG 9
Q+C+ CG
Sbjct: 21 QECVSCG 27


>sp|SYK_HALMA|LYSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 LQQCIQCG 9
L QC +CG
Sbjct: 195 LPQCAECG 202


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 2 LQQCIQCG 9
++ CIQCG
Sbjct: 293 MEHCIQCG 300


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 1 VLQQCIQCG 9
V + C+QCG
Sbjct: 645 VERTCMQCG 653


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 QCIQCG 9
QC QCG
Sbjct: 464 QCEQCG 469


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 1 VLQQCIQC 8
V ++C+QC
Sbjct: 577 VCKKCVQC 584


>sp|Y1401_METJA|PROBABLE ATP-dependent helicase MJ1401|Methanocaldococcus jannaschii (strain

Query: 2 LQQCIQCG 9
L+ CI CG
Sbjct: 122 LEICINCG 129


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VLQQCIQCG 9
V +QC +CG
Sbjct: 17 VRKQCQKCG 25


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VLQQCIQCG 9
V +QC +CG
Sbjct: 17 VRKQCQKCG 25


>sp|HDRC1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit C1|Methanococcus

Query: 2 LQQCIQCG 9
Q+C QCG
Sbjct: 31 FQKCYQCG 38


>sp|ILVC_UNCAG|KETOL-ACID reductoisomerase (NAD(+))|Uncultured archaeon GZfos26G2

Query: 3 QQCIQCG 9
+QC+ CG
Sbjct: 199 EQCVLCG 205


>sp|HDRC_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus

Query: 2 LQQCIQCG 9
+Q C QCG
Sbjct: 38 VQACYQCG 45


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 LQQCIQCG 9
+++C QCG
Sbjct: 648 IRKCPQCG 655


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 QCIQCG 9
+CI+CG
Sbjct: 1065 RCIKCG 1070


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 4 QCIQCG 9
+CI+CG
Sbjct: 1059 RCIKCG 1064


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 4 QCIQCG 9
+CI+CG
Sbjct: 1058 RCIKCG 1063


>sp|Y008_METKA|UNCHARACTERIZED protein MK0008|Methanopyrus kandleri (strain AV19 /

Query: 1 VLQQCIQ-------CGP 10
+L+QCI+ CGP
Sbjct: 68 LLEQCIEQGAEVKACGP 84


>sp|HDRC2_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit C2|Methanococcus

Query: 2 LQQCIQCG 9
L+ C QCG
Sbjct: 31 LKSCYQCG 38


>sp|IF2G_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 2 LQQCIQCG 9
+++C QCG
Sbjct: 58 IRKCPQCG 65


>sp|SCAF_METTH|DUF35 domain-containing scaffold protein|Methanothermobacter

Query: 4 QCIQCG 9
+C+QCG
Sbjct: 22 KCLQCG 27


>sp|THRC_METAC|THREONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 QCIQCG 9
+CI+CG
Sbjct: 5 KCIECG 10


>sp|SYK_NATPD|LYSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 QCIQCG 9
QC +CG
Sbjct: 196 QCAECG 201


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 4 QCIQCG 9
QC +CG
Sbjct: 729 QCAECG 734


>sp|Y661_METJA|UNCHARACTERIZED protein MJ0661|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 QCIQCG 9
CI+CG
Sbjct: 27 HCIKCG 32


>sp|RNP4_METST|RIBONUCLEASE P protein component 4|Methanosphaera stadtmanae (strain ATCC

Query: 1 VLQQCIQCG 9
+ ++C++CG
Sbjct: 85 ISRKCLECG 93


>sp|DMRX_METJA|DIHYDROMETHANOPTERIN reductase (acceptor)|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VLQQCIQCG 9
+L +C+ CG
Sbjct: 184 LLSKCLGCG 192


>sp|HDRC_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 2 LQQCIQCG 9
L+ C QCG
Sbjct: 32 LEYCFQCG 39


>sp|HDRC_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 2 LQQCIQCG 9
L+ C QCG
Sbjct: 32 LEYCFQCG 39


>sp|HDLC_ARCPA|HETERODISULFIDE reductase subunit C-like protein|Archaeoglobus profundus (strain

Query: 2 LQQCIQCG 9
L C+QCG
Sbjct: 41 LMYCMQCG 48


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 QQCIQCG 9
++C+ CG
Sbjct: 21 RECVSCG 27


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 QQCIQCG 9
++C+ CG
Sbjct: 21 RECVSCG 27


>sp|RGYRA_NANEQ|REVERSE gyrase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 LQQCIQCG 9
+++C+ CG
Sbjct: 117 IKKCLDCG 124


>sp|NOP10_STAMF|RIBOSOME biogenesis protein Nop10|Staphylothermus marinus (strain ATCC

Query: 1 VLQQCIQCG 9
++++CI+CG
Sbjct: 4 LMRKCIRCG 12


>sp|KITH_HALSA|THYMIDINE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 5 CIQCG 9
C+QCG
Sbjct: 148 CMQCG 152


>sp|KITH_HALS3|THYMIDINE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 5 CIQCG 9
C+QCG
Sbjct: 148 CMQCG 152


>sp|G1PDH_CALMQ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Caldivirga maquilingensis (strain ATCC

Query: 1 VLQQCIQC 8
V +QC+ C
Sbjct: 52 VSEQCVDC 59


>sp|FDHB_METJA|F420-DEPENDENT formate dehydrogenase subunit beta|Methanocaldococcus jannaschii

Query: 1 VLQQCIQCG 9
+ Q CI CG
Sbjct: 326 ISQSCINCG 334


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 LQQCIQCG 9
+++C+ CG
Sbjct: 702 IKRCLDCG 709


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 LQQCIQCG 9
+++C+ CG
Sbjct: 744 IKRCLDCG 751


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 3 QQCIQCG 9
+QC +CG
Sbjct: 406 KQCTECG 412


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 LQQCIQCG 9
+ +C++CG
Sbjct: 413 IDKCVKCG 420


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 LQQCIQCG 9
+ +C++CG
Sbjct: 413 IDKCVKCG 420


>sp|ASSTI_METJA|L-ASPARTATE semialdehyde sulfurtransferase iron-sulfur

Query: 2 LQQCIQCG 9
L++C+ CG
Sbjct: 79 LEKCVHCG 86


>sp|RNP4_THESM|RIBONUCLEASE P protein component 4|Thermococcus sibiricus (strain DSM 12597

Query: 1 VLQQCIQCG 9
V+ +C++CG
Sbjct: 92 VVIKCLECG 100


>sp|HDRC2_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 2 LQQCIQCG 9
++ C QCG
Sbjct: 33 IKACYQCG 40


>sp|PYRI_HYPBU|ASPARTATE carbamoyltransferase regulatory chain|Hyperthermus butylicus

Query: 4 QCIQCG 9
QC+ CG
Sbjct: 139 QCVYCG 144


>sp|ASSTI_METAC|L-ASPARTATE semialdehyde sulfurtransferase iron-sulfur subunit|Methanosarcina

Query: 3 QQCIQCG 9
++CIQCG
Sbjct: 109 KKCIQCG 115




8|SequenceR|45|36|GCFCRVLQQC

>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FCRVLQQC 10
F R+LQ+C
Sbjct: 192 FLRILQEC 199


>sp|RNH2_METMA|RIBONUCLEASE HII|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CFCRVLQQ 9
CF +VL+Q
Sbjct: 89 CFAKVLEQ 96


>sp|RNH2_METAC|RIBONUCLEASE HII|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 CFCRVLQQ 9
CF +VL+Q
Sbjct: 89 CFAKVLEQ 96


>sp|RNH2_METBF|RIBONUCLEASE HII|Methanosarcina barkeri (strain Fusaro /

Query: 2 CFCRVLQQ 9
CF +VL+Q
Sbjct: 89 CFSKVLEQ 96


>sp|Y685_METJA|UNCHARACTERIZED ATP-binding protein MJ0685|Methanocaldococcus jannaschii (strain

Query: 1 GCFCRV 6
GC+C V
Sbjct: 106 GCYCSV 111


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 3 FCRVLQQC 10
FC VL+ C
Sbjct: 311 FCDVLEDC 318




9|SequenceR|50|41|QKVLRGCFCR

>sp|Y810_METJA|PROTEIN MJ0810|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 RGCFC 9
RGCFC
Sbjct: 42 RGCFC 46


>sp|DIPPS_THEKO|BIFUNCTIONAL IPC transferase and DIPP|Thermococcus kodakarensis (strain ATCC

Query: 4 LRGCFCR 10
RG FCR
Sbjct: 359 FRGAFCR 365


>sp|QUEE_METAC|7-CARBOXY-7-DEAZAGUANINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 LRGCFCR 10
LR CFC+
Sbjct: 172 LRDCFCK 178




10|SequenceR|55|46|TFCAHQKVLR

>sp|GPMA_METAC|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosarcina acetivorans (strain ATCC

Query: 3 CAHQKVLR 10
CAHQ LR
Sbjct: 192 CAHQNSLR 199


>sp|GPMA_METMA|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 CAHQKVLR 10
CAHQ LR
Sbjct: 185 CAHQSSLR 192


>sp|Y732_METJA|UNCHARACTERIZED protein MJ0732|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TFCAHQKVL 9
T+C +K+L
Sbjct: 153 TYCKEEKIL 161




11|SequenceR|60|51|MALSATFCAH

***** No hits found ******


12|SequenceR|65|56|VDSYKMALSA

>sp|SYY_METMP|TYROSINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VDSYKMALSA 10
+D YK+ALS
Sbjct: 124 IDVYKLALST 133


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 VDSYKMAL 8
VD YK+AL
Sbjct: 414 VDDYKLAL 421


>sp|MFNA_METBU|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcoides burtonii

Query: 1 VDSYKMALS 9
+D +KMALS
Sbjct: 224 IDPHKMALS 232


>sp|SYY_METVS|TYROSINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VDSYKMALS 9
+D YK+AL+
Sbjct: 125 IDVYKLALA 133


>sp|AATC_DESSY|A-TYPE ATP synthase subunit C|Desulfurococcus sp. (strain SY)

Query: 1 VDSYKMALS 9
VDS+ MAL+
Sbjct: 267 VDSFDMALA 275




13|SequenceR|70|61|HDGLKVDSYK

>sp|FAU1_HALWD|PROBABLE ribonuclease FAU-1|Haloquadratum walsbyi (strain DSM 16790

Query: 1 HDGLKVDSY 9
H+G+ VD+Y
Sbjct: 201 HEGVTVDTY 209


>sp|MCRA_METFE|METHYL-COENZYME M reductase subunit alpha|Methanothermus fervidus

Query: 1 HDGLKVDSY 9
H GL DSY
Sbjct: 157 HPGLTADSY 165


>sp|PYRH_PICTO|URIDYLATE kinase|Picrophilus torridus (strain ATCC 700027

Query: 2 DGLKVDSY 9
+GLK+D Y
Sbjct: 203 NGLKIDEY 210


>sp|XDH1_HALVD|D-XYLOSE 1-dehydrogenase [NADP(+)] 1|Haloferax volcanii (strain ATCC 29605

Query: 1 HDGLKVDSY 9
H+G+ D+Y
Sbjct: 84 HEGVAADAY 92


>sp|GFO6_HALMA|D-XYLOSE 1-dehydrogenase [NADP(+)]|Haloarcula marismortui (strain ATCC

Query: 1 HDGLKVDSY 9
HDG D+Y
Sbjct: 83 HDGAASDAY 91




14|SequenceR|75|66|IAQNFHDGLK

>sp|RS4E_PYRAB|SMALL ribosomal subunit protein eS4|Pyrococcus abyssi (strain GE5 /

Query: 1 IAQNFHDG 8
I NFHDG
Sbjct: 138 IQLNFHDG 145


>sp|RS4E_PYRHO|SMALL ribosomal subunit protein eS4|Pyrococcus horikoshii (strain ATCC

Query: 4 NFHDG 8
NFHDG
Sbjct: 141 NFHDG 145


>sp|RS4E_PYRFU|SMALL ribosomal subunit protein eS4|Pyrococcus furiosus (strain ATCC

Query: 4 NFHDG 8
NFHDG
Sbjct: 141 NFHDG 145


>sp|Y2048_ARCFU|UNCHARACTERIZED protein AF_2048|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QNFHDGL 9
QNF DGL
Sbjct: 267 QNFGDGL 273


>sp|Y1488_ARCFU|UNCHARACTERIZED protein AF_1488|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IAQNFHDG 8
IAQ FHD
Sbjct: 109 IAQVFHDA 116


>sp|Y2246_METAC|UNCHARACTERIZED serpin-like protein MA_2246|Methanosarcina acetivorans (strain ATCC

Query: 2 AQNFHDGL 9
A+N++DG+
Sbjct: 157 AKNYYDGM 164


>sp|GCSPA_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 1 IAQNFHDGLK 10
+ +N H GLK
Sbjct: 408 LEKNIHGGLK 417


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IAQNFHDG 8
+ +NF+DG
Sbjct: 856 VEENFYDG 863


>sp|CCA_NANEQ|CCA-ADDING enzyme|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 QNFHDGLK 10
Q F++GLK
Sbjct: 97 QTFYEGLK 104




15|SequenceR|80|71|VSWEEIAQNF

>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VSWEEIA 7
VSW+EIA
Sbjct: 859 VSWDEIA 865


>sp|TSR3_METBF|16S rRNA aminocarboxypropyltransferase|Methanosarcina barkeri (strain

Query: 2 SWEEIAQNF 10
SWEE+ + F
Sbjct: 75 SWEEVERVF 83


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SWEEIAQN 9
SWEE+ +N
Sbjct: 731 SWEELNEN 738


>sp|TSR3_METAC|16S rRNA aminocarboxypropyltransferase|Methanosarcina acetivorans

Query: 2 SWEEIAQNF 10
SWEE+ + F
Sbjct: 76 SWEEVERVF 84


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VSWEEIA 7
VSWE+I
Sbjct: 209 VSWEDIG 215


>sp|TSR3_METMA|16S rRNA aminocarboxypropyltransferase|Methanosarcina mazei (strain

Query: 2 SWEEIAQNF 10
SWEE+ + F
Sbjct: 75 SWEEVERVF 83


>sp|CUTA_SULAC|GLYCERALDEHYDE dehydrogenase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 2 SWEEIA 7
SW+EIA
Sbjct: 577 SWDEIA 582


>sp|Y1004_METJA|UNCHARACTERIZED protein MJ1004|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VSWEEIAQ 8
+SWEE+ +
Sbjct: 143 ISWEELME 150


>sp|SYC_IGNH4|CYSTEINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VSWEEIAQNF 10
VSW+E+A +
Sbjct: 83 VSWKEVADTY 92


>sp|BSUHB_METJA|FRUCTOSE-1,6-BISPHOSPHATASE/INOSITOL-1-MONOPHOSPHATASE jannaschii (strain ATCC 43067

Query: 1 VSWEEIAQN 9
+ W+EI +N
Sbjct: 1 MKWDEIGKN 9


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 5 EIAQNF 10
EIAQNF
Sbjct: 102 EIAQNF 107


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 SWEEIAQNF 10
+WEE+A ++
Sbjct: 669 AWEELADDY 677


>sp|ENGB_PYRAB|PROBABLE GTP-binding protein EngB|Pyrococcus abyssi (strain GE5 /

Query: 1 VSWEEIAQNF 10
V W+EI + F
Sbjct: 172 VPWDEIDKTF 181




16|SequenceR|85|76|ETHKEVSWEE

>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 ETHKEVSW 8
E HK+V+W
Sbjct: 672 EPHKDVAW 679


>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 1 ETHKEVSW 8
E HK+V+W
Sbjct: 675 EPHKDVAW 682


>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ETHKEVSW 8
E HK+V+W
Sbjct: 672 EPHKDVAW 679


>sp|PSTB_METHJ|PHOSPHATE import ATP-binding protein PstB|Methanospirillum hungatei JF-1

Query: 3 HKEVSWEE 10
HK WEE
Sbjct: 131 HKAALWEE 138




17|SequenceR|90|81|DTPSQETHKE

>sp|PROA_METBU|GAMMA-GLUTAMYL phosphate reductase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DTPSQETHKE 10
DTP THKE
Sbjct: 429 DTPRPFTHKE 438


>sp|NK_THEAC|NUCLEOSIDE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PSQETHK 9
PSQE HK
Sbjct: 148 PSQEIHK 154


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 1 DTPSQETHKE 10
+TP+QE +E
Sbjct: 282 NTPAQEVEEE 291




18|SequenceR|95|86|IVGYADTPSQ

>sp|RS4_HALMA|SMALL ribosomal subunit protein uS4|Haloarcula marismortui (strain ATCC

Query: 3 GYADTPSQ 10
GYA+TP Q
Sbjct: 111 GYANTPEQ 118


>sp|IF2G_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 2 VGYADTP 8
+GYADTP
Sbjct: 51 LGYADTP 57


>sp|IF2G_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 VGYADTP 8
+GYADTP
Sbjct: 51 LGYADTP 57


>sp|Y175_METJA|UNCHARACTERIZED protein MJ0175|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VGYADTPSQ 10
VGY TP Q
Sbjct: 89 VGYLSTPQQ 97


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 3 GYADTPSQ 10
GY D PS+
Sbjct: 78 GYVDVPSK 85


>sp|IF2G_METAC|TRANSLATION initiation factor 2 subunit|Methanosarcina acetivorans (strain

Query: 2 VGYADTP 8
+GYAD+P
Sbjct: 80 LGYADSP 86


>sp|Y243_ARCFU|UNCHARACTERIZED protein AF_0243|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IVGYADTPS 9
I GY D PS
Sbjct: 6 IDGYVDEPS 14


>sp|ENO_SULAC|ENOLASE acidocaldarius (strain ATCC 33909

Query: 1 IVGYADTPS 9
IVG+ D P+
Sbjct: 34 IVGFGDAPA 42


>sp|IF2G_METMA|TRANSLATION initiation factor 2 subunit|Methanosarcina mazei (strain ATCC

Query: 2 VGYADTP 8
+GYAD+P
Sbjct: 68 LGYADSP 74


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GYADTP 8
G+ADTP
Sbjct: 197 GFADTP 202


>sp|GATE_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanobrevibacter smithii (strain ATCC

Query: 3 GYADTP 8
GY DTP
Sbjct: 140 GYLDTP 145


>sp|CCA_METB6|CCA-ADDING enzyme|Methanoregula boonei (strain DSM 21154

Query: 3 GYADTPSQ 10
GY D PS+
Sbjct: 252 GYRDAPSE 259


>sp|RRP42_SACS2|EXOSOME complex component Rrp42|Saccharolobus solfataricus (strain ATCC

Query: 4 YADTPSQ 10
Y DTP+Q
Sbjct: 75 YEDTPNQ 81


>sp|APBC_PYRAB|IRON-SULFUR cluster carrier protein|Pyrococcus abyssi (strain GE5 /

Query: 1 IVGYADTPS 9
IV Y DTP+
Sbjct: 262 IVLYGDTPA 270


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 IVGYADTPS 9
++GY D P+
Sbjct: 708 VIGYNDRPA 716


>sp|PYRB_METTH|ASPARTATE carbamoyltransferase catalytic subunit|Methanothermobacter

Query: 1 IVGYADT 7
+VG+ADT
Sbjct: 70 VVGFADT 76


>sp|APBC_PYRFU|IRON-SULFUR cluster carrier protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IVGYADTPS 9
IV Y DTP+
Sbjct: 262 IVLYGDTPA 270


>sp|RRP42_SACI4|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.14.25

Query: 4 YADTPSQ 10
Y DTP+Q
Sbjct: 75 YEDTPNQ 81


>sp|RRP42_SACI3|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.27)

Query: 4 YADTPSQ 10
Y DTP+Q
Sbjct: 75 YEDTPNQ 81


>sp|RRP42_SACI1|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain

Query: 4 YADTPSQ 10
Y DTP+Q
Sbjct: 75 YEDTPNQ 81


>sp|RRP42_SACI7|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain

Query: 4 YADTPSQ 10
Y DTP+Q
Sbjct: 75 YEDTPNQ 81


>sp|RRP42_SACI6|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.4 /

Query: 4 YADTPSQ 10
Y DTP+Q
Sbjct: 75 YEDTPNQ 81


>sp|RRP42_SACI2|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain L.S.2.15

Query: 4 YADTPSQ 10
Y DTP+Q
Sbjct: 75 YEDTPNQ 81


>sp|Y1170_METJA|UPF0145 protein MJ1170|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IVGYADTPSQ 10
++GY D P
Sbjct: 24 VIGYGDDPDD 33




19|SequenceR|100|91|GGQFNIVGYA

>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GGQFNIVGY 9
GGQ N VGY
Sbjct: 541 GGQDNDVGY 549


>sp|Y896_ARCFU|UNCHARACTERIZED protein AF_0896|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QFNIVGYA 10
+FN++GY
Sbjct: 199 EFNLIGYG 206


>sp|CETZ_THEKO|TUBULIN-LIKE protein CetZ|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GQFNIVGYA 10
G F VGYA
Sbjct: 216 GSFATVGYA 224


>sp|CETZ_PYRHO|TUBULIN-LIKE protein CetZ|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GQFNIVGYA 10
G F VGYA
Sbjct: 216 GSFATVGYA 224


>sp|CETZ_PYRFU|TUBULIN-LIKE protein CetZ|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GQFNIVGYA 10
G F VGYA
Sbjct: 216 GSFATVGYA 224


>sp|CETZ_PYRAB|TUBULIN-LIKE protein CetZ|Pyrococcus abyssi (strain GE5 /

Query: 2 GQFNIVGYA 10
G F VGYA
Sbjct: 216 GSFATVGYA 224


>sp|TRM1_ARCFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Archaeoglobus fulgidus

Query: 1 GGQFNIVG 8
GG+F+++G
Sbjct: 242 GGKFSLIG 249


>sp|Y1137_METTH|UNCHARACTERIZED protein MTH_1137|Methanothermobacter thermautotrophicus (strain

Query: 1 GGQFNIVG 8
GG FN+ G
Sbjct: 250 GGPFNLAG 257


>sp|OGT_PYRSN|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrococcus sp. (strain NA2)

Query: 2 GQFNIVG 8
G+FNI+G
Sbjct: 5 GRFNILG 11


>sp|EF1B_PYRFU|ELONGATION factor 1-beta|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GQFNIVG 8
G FN+VG
Sbjct: 2 GDFNLVG 8


>sp|LEUC_CALMQ|3-ISOPROPYLMALATE dehydratase large subunit|Caldivirga maquilingensis (strain ATCC

Query: 1 GGQFNIVG 8
GG F ++G
Sbjct: 360 GGHFGVIG 367


>sp|GLNA_THEKO|GLUTAMINE synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GGQFNIVG 8
GG F++VG
Sbjct: 146 GGYFDLVG 153




20|SequenceR|105|96|RYSHSGGQFN

>sp|THS1_HALVD|CHAPERONIN subunit CTT1|Haloferax volcanii (strain ATCC 29605

Query: 1 RYSHSGGQF 9
R H GG+F
Sbjct: 465 RSRHDGGEF 473


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YSHSGGQF 9
YS +GG+F
Sbjct: 639 YSENGGRF 646


>sp|ENO_HALWD|ENOLASE walsbyi (strain DSM 16790

Query: 2 YSHSGGQF 9
Y H GG F
Sbjct: 121 YQHLGGTF 128


>sp|ENO_HALMA|ENOLASE marismortui (strain ATCC 43049

Query: 2 YSHSGGQF 9
Y H GG F
Sbjct: 121 YQHLGGTF 128


>sp|ENO_HALLT|ENOLASE lacusprofundi (strain ATCC 49239

Query: 2 YSHSGGQF 9
Y H GG F
Sbjct: 120 YQHLGGAF 127


>sp|GLNA_METTH|GLUTAMINE synthetase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 RYSHSGGQFN 10
+Y+H G ++N
Sbjct: 120 KYAHLGYEYN 129


>sp|ENO_NATPD|ENOLASE pharaonis (strain ATCC 35678

Query: 2 YSHSGGQF 9
Y H GG F
Sbjct: 121 YQHLGGAF 128




21|SequenceR|110|101|RVYKARYSHS

>sp|MCM_SACS2|MINICHROMOSOME maintenance protein MCM|Saccharolobus solfataricus (strain ATCC

Query: 1 RVYKARYSH 9
R+YKA Y H
Sbjct: 136 RIYKATYKH 144


>sp|MCM_SACI5|MINICHROMOSOME maintenance protein MCM|Saccharolobus islandicus (strain REY15A)

Query: 1 RVYKARYSH 9
R+YKA Y H
Sbjct: 136 RIYKATYKH 144


>sp|RFCL_PYRCJ|REPLICATION factor C large subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 RVYKARY 7
RVYKAR+
Sbjct: 253 RVYKARW 259


>sp|CARA_METTH|CARBAMOYL phosphate synthase small chain|Methanothermobacter

Query: 1 RVYKARYSH 9
R+YK ++ H
Sbjct: 264 RIYKMKFGH 272


>sp|RFCL_PYRAE|REPLICATION factor C large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RVYKARY 7
RVYKAR+
Sbjct: 254 RVYKARW 260


>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VYKARYSHS 10
+YKA Y HS
Sbjct: 89 IYKAPYDHS 97


>sp|UVRB_METMP|UVRABC system protein B|Methanococcus maripaludis (strain DSM 14266

Query: 1 RVYKARYSHS 10
R KARY HS
Sbjct: 466 RNVKARYLHS 475


>sp|RL4_SACI7|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 1 RVYKARYSHS 10
RV+ A ++HS
Sbjct: 40 RVFLAEFTHS 49


>sp|RL4_SACI1|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 1 RVYKARYSHS 10
RV+ A ++HS
Sbjct: 40 RVFLAEFTHS 49


>sp|RL4_SACI2|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 1 RVYKARYSHS 10
RV+ A ++HS
Sbjct: 40 RVFLAEFTHS 49


>sp|CARA_PYRFU|CARBAMOYL phosphate synthase small chain|Pyrococcus furiosus (strain ATCC

Query: 2 VYKARYSH 9
+YK +Y H
Sbjct: 277 IYKLKYGH 284


>sp|RL4_SACI6|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 1 RVYKARYSHS 10
RV+ A ++HS
Sbjct: 40 RVFLAEFTHS 49


>sp|RL4_SACI4|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 1 RVYKARYSHS 10
RV+ A ++HS
Sbjct: 40 RVFLAEFTHS 49


>sp|RL4_SACI3|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 1 RVYKARYSHS 10
RV+ A ++HS
Sbjct: 40 RVFLAEFTHS 49


>sp|UVRB_METST|UVRABC system protein B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 KARYSHS 10
KARY HS
Sbjct: 469 KARYLHS 475


>sp|TRPE_SACS2|ANTHRANILATE synthase component 1|Saccharolobus solfataricus (strain ATCC

Query: 3 YKARYS 8
YKARYS
Sbjct: 37 YKARYS 42


>sp|UVRB_METMA|UVRABC system protein B|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 KARYSHS 10
KARY HS
Sbjct: 491 KARYLHS 497


>sp|UVRB_METAC|UVRABC system protein B|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 KARYSHS 10
KARY HS
Sbjct: 491 KARYLHS 497


>sp|RL3_METJA|LARGE ribosomal subunit protein uL3|Methanocaldococcus jannaschii

Query: 2 VYKARYSHS 10
VYKA SH+
Sbjct: 44 VYKAGMSHA 52


>sp|SPEH_THEKO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus kodakarensis (strain ATCC

Query: 3 YKARYSH 9
+KA+Y+H
Sbjct: 103 FKAKYAH 109


>sp|YE7B_METJA|UNCHARACTERIZED protein MJ1479.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RVYKARYSH 9
+VYK R+ H
Sbjct: 83 KVYKDRFKH 91


>sp|RGYRA_NANEQ|REVERSE gyrase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 RVYKARYSH 9
R YK +Y H
Sbjct: 684 REYKKKYEH 692




22|SequenceR|115|106|TDYSLRVYKA

>sp|LEU1_METKA|PROBABLE 2-isopropylmalate synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 DYSLRVYKA 10
DY L VYKA
Sbjct: 145 DYLLEVYKA 153


>sp|RLME_METHJ|RIBOSOMAL RNA large subunit methyltransferase|Methanospirillum hungatei JF-1

Query: 3 YSLRVYKA 10
YS+R YKA
Sbjct: 167 YSVRTYKA 174


>sp|OGT_PYRAB|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 TDYSLRVY 8
TD+ +RVY
Sbjct: 91 TDFEIRVY 98


>sp|GLNA_METTH|GLUTAMINE synthetase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 DYSLRVYK 9
DY +RV+K
Sbjct: 426 DYRVRVFK 433


>sp|SYY_METJA|TYROSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DYSLRVYK 9
DY+L VY+
Sbjct: 113 DYTLNVYR 120


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 DYSLRVYKA 10
+YS+R+Y+
Sbjct: 671 EYSMRIYQG 679


>sp|SYY_METS3|TYROSINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 DYSLRVYK 9
DY+ +VYK
Sbjct: 118 DYASKVYK 125


>sp|HPCAS_SULTO|3-HYDROXYPROPIONYL-COENZYME A synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DYSLRVYK 9
DY++R YK
Sbjct: 22 DYNMRYYK 29


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DYSLRVY 8
DYS+R+Y
Sbjct: 1401 DYSIRLY 1407




23|SequenceR|120|111|IVEPKTDYSL

>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 3 EPKTDYSL 10
EP+TDY++
Sbjct: 356 EPRTDYNI 363


>sp|COFH_METHJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanospirillum hungatei JF-1 (strain

Query: 1 IVEPKTDYS 9
+VE +TDYS
Sbjct: 355 LVERRTDYS 363


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 IVEPKTDYSL 10
+V P DYSL
Sbjct: 242 VVNPDMDYSL 251


>sp|FWDB_METMP|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanococcus

Query: 2 VEPKTDYSL 10
VEP DY L
Sbjct: 204 VEPHKDYEL 212


>sp|FWDB_METJA|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanocaldococcus

Query: 2 VEPKTDYSL 10
VEP DY L
Sbjct: 205 VEPHKDYEL 213


>sp|CCA_SULAC|CCA-ADDING enzyme|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IVEPKTDY 8
+VEPK D+
Sbjct: 201 LVEPKRDF 208


>sp|HMEB_ARCFU|HDR-LIKE menaquinol oxidoreductase integral membrane|Archaeoglobus fulgidus

Query: 1 IVEPKTDYSL 10
++ PKT Y L
Sbjct: 293 VLNPKTGYDL 302


>sp|NREA_ARCFU|DNA repair protein NreA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VEPKTDYS 9
+ PK DYS
Sbjct: 289 IRPKRDYS 296


>sp|PYRG_HALMA|CTP synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 EPKTDY 8
EP+TDY
Sbjct: 4 EPETDY 9


>sp|CORA_METJA|COBALT/MAGNESIUM transport protein CorA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IVEPKTD 7
IVEPK D
Sbjct: 13 IVEPKLD 19


>sp|SPSS1_ARCFU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PKTDY 8
PKTDY
Sbjct: 121 PKTDY 125


>sp|PYRG_HALHT|CTP synthase|Haloarcula hispanica (strain ATCC 33960

Query: 3 EPKTDY 8
EP+TDY
Sbjct: 4 EPETDY 9


>sp|MTHK_METTH|CALCIUM-GATED potassium channel MthK|Methanothermobacter thermautotrophicus

Query: 1 IVEPKTDYSL 10
I++P DYS
Sbjct: 303 IIDPPRDYSF 312




24|SequenceR|125|116|LLLQLIVEPK

>sp|ATGT_PYRAB|TRNA-GUANINE(15) transglycosylase|Pyrococcus abyssi (strain GE5 /

Query: 4 QLIVEPK 10
QLIVEPK
Sbjct: 44 QLIVEPK 50


>sp|ATGT_PYRFU|TRNA-GUANINE(15) transglycosylase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 QLIVEPK 10
QLIVEPK
Sbjct: 44 QLIVEPK 50


>sp|Y1662_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 LLLQLIVEPK 10
+ LQLI +PK
Sbjct: 457 MALQLITKPK 466




25|SequenceR|130|121|MQWEKLLLQL

>sp|Y154_ARCFU|UNCHARACTERIZED protein AF_0154|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MQWEKLLLQL 10
M+W +L+LQL
Sbjct: 245 MEWVRLILQL 254


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MQWEKLL 7
M WEK+L
Sbjct: 229 MHWEKML 235


>sp|SYE_METBF|GLUTAMATE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 MQWEKLL 7
M WEK+L
Sbjct: 229 MHWEKML 235


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 MQWEKLL 7
M WEK+L
Sbjct: 229 MHWEKML 235


>sp|GATE_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanobrevibacter smithii (strain

Query: 1 MQWEKLLLQL 10
M WEKL L++
Sbjct: 1 MDWEKLGLKM 10


>sp|G3PP_METKA|GLYCERALDEHYDE 3-phosphate phosphatase|Methanopyrus kandleri (strain AV19 /

Query: 2 QWEKLL 7
QWEKL+
Sbjct: 126 QWEKLI 131


>sp|G3PP_METTH|GLYCERALDEHYDE 3-phosphate phosphatase|Methanothermobacter thermautotrophicus

Query: 2 QWEKLL 7
QWEKL+
Sbjct: 124 QWEKLI 129


>sp|G3PP_METJA|GLYCERALDEHYDE 3-phosphate phosphatase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 QWEKLL 7
QWEKL+
Sbjct: 124 QWEKLI 129


>sp|G3PP_PYRAB|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 2 QWEKLL 7
QWEK+L
Sbjct: 124 QWEKIL 129


>sp|G3PP_PYRHO|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 QWEKLL 7
QWEK+L
Sbjct: 124 QWEKIL 129


>sp|G3PP_PYRFU|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 QWEKLL 7
QWEK+L
Sbjct: 126 QWEKIL 131


>sp|GATE_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanothermobacter thermautotrophicus

Query: 1 MQWEKLLLQL 10
M WEK+ L++
Sbjct: 1 MDWEKVGLKM 10


>sp|THIC_SULTO|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 MQWEKLLLQL 10
++WEK++ L
Sbjct: 378 LEWEKMISSL 387




26|SequenceR|135|126|LKPLEMQWEK

>sp|Y462_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 LKPLEMQW 8
LKPL++ W
Sbjct: 272 LKPLDLMW 279


>sp|MOAA_PYRAB|PROBABLE GTP 3',8-cyclase|Pyrococcus abyssi (strain GE5 /

Query: 1 LKPLEMQWEK 10
LKPLE ++EK
Sbjct: 202 LKPLEEEFEK 211


>sp|Y3551_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 LKPLEMQW 8
LKPL++ W
Sbjct: 272 LKPLDLMW 279


>sp|SYR_PYRIL|ARGININE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KPLEMQWE 9
KP+E +WE
Sbjct: 497 KPIEFKWE 504


>sp|MOAA_PYRFU|PROBABLE GTP 3',8-cyclase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LKPLEMQWEK 10
LKPLE ++EK
Sbjct: 202 LKPLEEKFEK 211


>sp|SYR_PYRAR|ARGININE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 KPLEMQWE 9
KP+E +WE
Sbjct: 497 KPIEFRWE 504


>sp|MOAA_PYRHO|PROBABLE GTP 3',8-cyclase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LKPLEMQWEK 10
LKPLE ++EK
Sbjct: 202 LKPLEEKFEK 211


>sp|RL5_CALMQ|LARGE ribosomal subunit protein uL5|Caldivirga maquilingensis (strain

Query: 1 LKPLEMQWEK 10
+KP ++ W K
Sbjct: 14 IKPSDLDWRK 23


>sp|GCH3_SACI2|GTP cyclohydrolase III|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 PLEMQW 8
PLE QW
Sbjct: 93 PLEAQW 98


>sp|GCH3_SACI1|GTP cyclohydrolase III|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 PLEMQW 8
PLE QW
Sbjct: 93 PLEAQW 98


>sp|SYR_PYRAE|ARGININE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 KPLEMQWE 9
KP+E +W+
Sbjct: 497 KPIEFKWD 504


>sp|GCH3_SACI7|GTP cyclohydrolase III|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 PLEMQW 8
PLE QW
Sbjct: 93 PLEAQW 98


>sp|GCH3_SACI6|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.16.4 /

Query: 3 PLEMQW 8
PLE QW
Sbjct: 93 PLEAQW 98


>sp|GCH3_SACI4|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.14.25 /

Query: 3 PLEMQW 8
PLE QW
Sbjct: 93 PLEAQW 98


>sp|SYR_METKA|ARGININE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 KPLEMQWEK 10
KP+E W++
Sbjct: 458 KPIEFDWDE 466


>sp|GCH3_SACI3|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.16.27)

Query: 3 PLEMQW 8
PLE QW
Sbjct: 93 PLEAQW 98


>sp|GCH3_SACS2|GTP cyclohydrolase III|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PLEMQW 8
PLE QW
Sbjct: 93 PLEAQW 98


>sp|SYR_THEAC|ARGININE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KPLEMQWEK 10
KP+ +WE+
Sbjct: 414 KPITFRWEE 422


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 4 LEMQWE 9
LEM WE
Sbjct: 564 LEMDWE 569


>sp|PANE_THEKO|2-DEHYDROPANTOATE 2-reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LKPLEMQWE 9
+ PLE+ W+
Sbjct: 231 IHPLELLWD 239


>sp|SYR_METST|ARGININE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 KPLEMQWEK 10
KP+ +WE+
Sbjct: 428 KPITFKWEE 436




27|SequenceR|140|131|HVSIVLKPLE

>sp|Y496_METJA|UNCHARACTERIZED protein MJ0496|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HVSIVLKP 8
H+S+V+KP
Sbjct: 113 HISVVVKP 120




28|SequenceR|145|136|KQMGGHVSIV

>sp|PUR2_METTH|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KQMGGHVSIV 10
K++GGH S+V
Sbjct: 176 KRIGGHPSVV 185


>sp|PURA_METTP|ADENYLOSUCCINATE synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 KQMGGHVSIV 10
K+MGG S+V
Sbjct: 168 KEMGGDPSVV 177


>sp|GLYA_CALMQ|SERINE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 1 KQMGGHVS 8
+Q GGH+S
Sbjct: 119 RQCGGHIS 126


>sp|END4_THEAC|PROBABLE endonuclease 4|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 MGGHVSI 9
+GGH+S+
Sbjct: 15 IGGHISV 21


>sp|APT_METMP|ADENINE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 1 KQMGGHVS 8
+++GGHVS
Sbjct: 135 EKLGGHVS 142


>sp|APT_METM5|ADENINE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 KQMGGHVS 8
+++GGHVS
Sbjct: 135 EKLGGHVS 142


>sp|PYRH_METM6|URIDYLATE kinase|Methanococcus maripaludis (strain C6 /

Query: 1 KQMGGHVSIV 10
K+MG VS+V
Sbjct: 34 KEMGHRVSVV 43


>sp|PYRH_METM5|URIDYLATE kinase|Methanococcus maripaludis (strain C5 /

Query: 1 KQMGGHVSIV 10
K+MG VS+V
Sbjct: 34 KEMGHRVSVV 43


>sp|LEUC_METTH|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanothermobacter

Query: 3 MGGHVSIV 10
+GGHV +V
Sbjct: 363 LGGHVGLV 370


>sp|PYRH_METMP|URIDYLATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KQMGGHVSIV 10
K+MG VS+V
Sbjct: 34 KEMGHRVSVV 43


>sp|END4_THEVO|PROBABLE endonuclease 4|Thermoplasma volcanium (strain ATCC 51530

Query: 3 MGGHVSI 9
+GGH+S+
Sbjct: 14 IGGHISV 20


>sp|APT_METM7|ADENINE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 KQMGGHVS 8
+++GGHVS
Sbjct: 135 EKIGGHVS 142


>sp|GUAAA_METM7|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus

Query: 1 KQMGGHVS 8
K GGHVS
Sbjct: 84 KAYGGHVS 91


>sp|GUAAA_METM6|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus

Query: 1 KQMGGHVS 8
K GGHVS
Sbjct: 84 KAYGGHVS 91


>sp|PYRH_METM7|URIDYLATE kinase|Methanococcus maripaludis (strain C7 /

Query: 1 KQMGGHVSIV 10
K+MG VS+V
Sbjct: 34 KEMGHRVSVV 43




29|SequenceR|150|141|PHLEFKQMGG

>sp|HELS_METMA|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PHLEFKQMGG 10
P LE+KQM G
Sbjct: 368 PVLEYKQMAG 377


>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 1 PHLEFKQMGG 10
P LE+KQM G
Sbjct: 368 PVLEYKQMAG 377


>sp|HELS_METBF|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina barkeri (strain Fusaro /

Query: 1 PHLEFKQMGG 10
P LE+KQM G
Sbjct: 368 PVLEYKQMAG 377


>sp|HELS_METAR|ATP-DEPENDENT DNA helicase Hel308|Methanocella arvoryzae (strain DSM 22066

Query: 1 PHLEFKQMGG 10
P LE+KQM G
Sbjct: 373 PVLEYKQMAG 382


>sp|HELS_METAC|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PHLEFKQMGG 10
P LE+KQM G
Sbjct: 368 PVLEYKQMAG 377


>sp|Y125_METJA|PUTATIVE RNase MJ0125|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PHLEFKQMGG 10
PH+ FK++ G
Sbjct: 65 PHIPFKELAG 74


>sp|Y1216_METJA|PUTATIVE RNase MJ1216|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PHLEFKQMGG 10
PH+ FK++ G
Sbjct: 65 PHIPFKELAG 74


>sp|HELS_CALMQ|ATP-DEPENDENT DNA helicase Hel308|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 PHLEFKQMGG 10
P +E+KQM G
Sbjct: 372 PVMEYKQMAG 381


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PHLEFKQMGG 10
P +E+KQM G
Sbjct: 372 PVMEYKQMSG 381


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 1 PHLEFKQMGG 10
P +E+KQM G
Sbjct: 379 PVMEYKQMSG 388


>sp|HELS_PYRCJ|ATP-DEPENDENT DNA helicase Hel308|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PHLEFKQMGG 10
P LE++QM G
Sbjct: 366 PVLEYRQMAG 375


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 1 PHLEFKQMGG 10
P +E+KQM G
Sbjct: 379 PIMEYKQMSG 388


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PHLEFKQMGG 10
P +++KQM G
Sbjct: 374 PVMDYKQMSG 383


>sp|MFNA_METVS|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus vannielii

Query: 1 PHLEFKQM 8
PH+EF+ +
Sbjct: 364 PHIEFEHI 371


>sp|Y015_METJA|UNCHARACTERIZED protein MJ0015|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LEFKQMG 9
+EFK+MG
Sbjct: 71 IEFKKMG 77


>sp|HMEA_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 PHLEFKQMGG 10
PH+ + ++GG
Sbjct: 259 PHVFYAKLGG 268




30|SequenceR|155|146|LQKIRPHLEF

>sp|NIFD_METMI|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 1 LQKIRPHLEF 10
++KI+P L+F
Sbjct: 322 MEKIQPELDF 331


>sp|Y1350_METJA|UNCHARACTERIZED protein MJ1350|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LQKIRPHLE 9
L+KI+P++E
Sbjct: 212 LEKIKPYIE 220


>sp|HIS7_HALWD|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Haloquadratum walsbyi (strain DSM 16790

Query: 5 RPHLEF 10
RPH EF
Sbjct: 127 RPHFEF 132


>sp|NIFD_METMP|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 1 LQKIRPHLEF 10
++KI+P L+F
Sbjct: 322 MEKIQPELDF 331


>sp|G3PP_METJA|GLYCERALDEHYDE 3-phosphate phosphatase|Methanocaldococcus jannaschii (strain ATCC

Query: 5 RPHLEF 10
+PHLEF
Sbjct: 150 KPHLEF 155


>sp|SAHH_PYRAE|ADENOSYLHOMOCYSTEINASE aerophilum (strain ATCC 51768

Query: 2 QKIRPHLE 9
++IRP+LE
Sbjct: 334 RRIRPYLE 341


>sp|MFNA_METVS|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus vannielii

Query: 4 IRPHLEF 10
I PH+EF
Sbjct: 362 IMPHIEF 368


>sp|AROB_SULAC|3-DEHYDROQUINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 IRPHLE 9
I+PHLE
Sbjct: 46 IKPHLE 51


>sp|NADE_SACS2|NH(3)-DEPENDENT NAD(+) synthetase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LQKIRPHLEF 10
+++IR +LEF
Sbjct: 21 VERIREYLEF 30


>sp|GLKA_PYRHO|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus horikoshii (strain ATCC

Query: 4 IRPHLEF 10
IR HLEF
Sbjct: 264 IRAHLEF 270


>sp|ALAXL_PYRHO|ALANYL-TRNA editing protein AlaX-L|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LQKIRPHLE 9
L+K+R HL+
Sbjct: 395 LEKLRSHLQ 403




31|SequenceR|160|151|LGKGLLQKIR

>sp|PCKG_THEVO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LGKGLLQKI 9
+GKG+++KI
Sbjct: 156 MGKGVIEKI 164


>sp|Y333_METJA|UNCHARACTERIZED protein MJ0333|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGKGLLQKIR 10
LGKG L KI+
Sbjct: 58 LGKGTLHKIK 67


>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 3 KGLLQKIR 10
KGLL+K R
Sbjct: 637 KGLLEKFR 644


>sp|TRPD_THEKO|ANTHRANILATE phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 LGKGLLQKI 9
LG+G+L+K+
Sbjct: 308 LGQGMLEKL 316


>sp|RIBA_PICTO|GTP cyclohydrolase-2|Picrophilus torridus (strain ATCC 700027

Query: 2 GKGLLQKIR 10
G GLL KIR
Sbjct: 93 GIGLLNKIR 101


>sp|RL18E_HALMA|LARGE ribosomal subunit protein eL18|Haloarcula marismortui (strain

Query: 1 LGKGLLQK 8
LG G+LQK
Sbjct: 66 LGSGVLQK 73


>sp|RRP4_SULTO|EXOSOME complex component Rrp4|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 KGLLQKIR 10
KGL +KIR
Sbjct: 218 KGLTEKIR 225


>sp|SYY_METTH|TYROSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GKGLLQKIR 10
GKG +++IR
Sbjct: 76 GKGSMERIR 84


>sp|DAPB_METVS|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LGKGLLQKI 9
+G G++QKI
Sbjct: 13 MGSGIIQKI 21


>sp|RSMA_META3|PROBABLE ribosomal RNA small subunit|Methanococcus aeolicus (strain ATCC

Query: 1 LGKGLLQK 8
LGKG+L K
Sbjct: 38 LGKGILTK 45


>sp|G1PDH_METS5|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Metallosphaera sedula (strain ATCC 51363

Query: 1 LGKGLLQKIR 10
+G G+L K+R
Sbjct: 16 VGNGILSKLR 25


>sp|RL30_THEAC|LARGE ribosomal subunit protein uL30|Thermoplasma acidophilum (strain

Query: 3 KGLLQKIR 10
KG+LQK++
Sbjct: 42 KGMLQKVK 49


>sp|RL30_THEVO|LARGE ribosomal subunit protein uL30|Thermoplasma volcanium (strain

Query: 3 KGLLQKIR 10
KG+LQK++
Sbjct: 42 KGMLQKVK 49


>sp|RL30_METJA|LARGE ribosomal subunit protein uL30|Methanocaldococcus jannaschii

Query: 3 KGLLQKIR 10
KG+LQK++
Sbjct: 43 KGMLQKVK 50


>sp|G1PDH_PYRHO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LGKGLLQKI 9
LGK L+Q+I
Sbjct: 12 LGKNLIQEI 20




32|SequenceR|165|156|VAAKILGKGL

>sp|HPPA_PYRAE|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Pyrobaculum aerophilum (strain

Query: 2 AAKILGKGL 10
A+KILGKG+
Sbjct: 506 ASKILGKGI 514


>sp|TRMY_PYRAB|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus abyssi

Query: 3 AKILGKGL 10
AKI+GK L
Sbjct: 86 AKIIGKAL 93




33|SequenceR|170|161|WAGTTVAAKI

>sp|IF2P_HYPBU|PROBABLE translation initiation factor IF-2|Hyperthermus butylicus (strain

Query: 3 GTTVAAK 9
GTTVAAK
Sbjct: 35 GTTVAAK 41


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 1 WAGTTV 6
W GTTV
Sbjct: 284 WPGTTV 289


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 1 WAGTTV 6
W GTTV
Sbjct: 284 WPGTTV 289




34|SequenceR|175|166|GGTLIWAGTT

>sp|AMPPA_METB6|AMP phosphorylase|Methanoregula boonei (strain DSM 21154

Query: 1 GGTLIWAGTT 10
GGT++W G T
Sbjct: 230 GGTIVWGGAT 239


>sp|AMPPA_METBU|AMP phosphorylase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GGTLIWAGTT 10
GG L+W G T
Sbjct: 228 GGVLVWGGAT 237


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GGTLIWAGTT 10
GG L+W G T
Sbjct: 227 GGALVWGGAT 236


>sp|AMPPA_METMA|AMP phosphorylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GGTLIWAGTT 10
GG L+W G T
Sbjct: 228 GGALVWGGAT 237


>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GGTLIWAGTT 10
GG L+W G T
Sbjct: 227 GGALVWGGAT 236


>sp|AMPPA_METAR|AMP phosphorylase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GGTLIWAGTT 10
GG L+W G T
Sbjct: 228 GGCLVWGGAT 237


>sp|HTPX_AERPE|PROTEASE HtpX homolog|Aeropyrum pernix (strain ATCC 700893

Query: 1 GGTLIWAG 8
G TL+WAG
Sbjct: 161 GRTLVWAG 168


>sp|AMPPA_METHJ|AMP phosphorylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GGTLIWAGTT 10
GG ++W G T
Sbjct: 229 GGVIVWGGAT 238


>sp|AMPPA_METMJ|AMP phosphorylase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GGTLIWAGTT 10
GG ++W G T
Sbjct: 229 GGAIVWGGAT 238


>sp|AMPPA_NATPD|AMP phosphorylase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GGTLIWAG 8
GG L+W G
Sbjct: 226 GGCLVWGG 233


>sp|AMPPA_METTP|AMP phosphorylase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GGTLIWAGTT 10
GG + W G T
Sbjct: 226 GGVIAWGGAT 235


>sp|EPDA_METMP|MINOR structural pilin EpdA|Methanococcus maripaludis (strain DSM 14266

Query: 2 GTLIWAGTT 10
GTLI+AG T
Sbjct: 69 GTLIYAGMT 77


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 1 GGTLIWAGT 9
GG++IW T
Sbjct: 652 GGSVIWIDT 660


>sp|AMPP1_ARCFU|AMP phosphorylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GGTLIWAGTT 10
GG + W G T
Sbjct: 229 GGVIAWGGAT 238


>sp|RIBB_METMA|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 LIWAGT 9
L+WAGT
Sbjct: 240 LLWAGT 245


>sp|AMPPA_METLZ|AMP phosphorylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GGTLIWAGTT 10
GG ++W G T
Sbjct: 229 GGVIVWGGAT 238


>sp|SYP_NANEQ|PROLINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GGTLIWAG 8
GG L W G
Sbjct: 329 GGALYWLG 336


>sp|PCKG_THEVO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GTLIWAG 8
GT IW G
Sbjct: 493 GTFIWPG 499


>sp|Y1154_METLZ|UPF0173 metal-dependent hydrolase Mlab_1154|Methanocorpusculum labreanum

Query: 1 GGTLIWAGTT 10
GG++ W G T
Sbjct: 80 GGSVEWEGIT 89


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 1 GGTLIWAG 8
GG +WAG
Sbjct: 418 GGVAMWAG 425


>sp|AMPPA_META3|AMP phosphorylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GGTLIWAG 8
GG L W G
Sbjct: 229 GGCLAWGG 236


>sp|GGGPS_METST|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GGTLIWAGTT 10
GGT+ W G +
Sbjct: 133 GGTVGWVGDS 142




35|SequenceR|180|171|VGTNVGGTLI

>sp|FDHB_METTF|F420-DEPENDENT formate dehydrogenase subunit beta|Methanothermobacter

Query: 1 VGTNVGGTL 9
VG N GGTL
Sbjct: 125 VGVNCGGTL 133


>sp|Y779_METS3|UPF0173 metal-dependent hydrolase Msm_0779|Methanobrevibacter smithii

Query: 1 VGTNVGGTLI 10
+G N+GG+ I
Sbjct: 87 IGVNIGGSFI 96


>sp|FDHB_METFO|F420-DEPENDENT formate dehydrogenase subunit beta|Methanobacterium formicicum

Query: 1 VGTNVGGTL 9
VG N GGT+
Sbjct: 125 VGLNCGGTM 133


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 VGTNVGGTL 9
VGTN GGTL
Sbjct: 2636 VGTNNGGTL 2644


>sp|Y1493_THEPD|UPF0173 metal-dependent hydrolase Tpen_1493|Thermofilum pendens (strain DSM

Query: 1 VGTNVGGTL 9
VG N+GG L
Sbjct: 94 VGANIGGPL 102


>sp|FDHB_METJA|F420-DEPENDENT formate dehydrogenase subunit beta|Methanocaldococcus jannaschii

Query: 1 VGTNVGGTL 9
+G N GGT+
Sbjct: 118 IGLNCGGTI 126


>sp|COFH_METJA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocaldococcus jannaschii (strain

Query: 2 GTNVGGTLI 10
+VGGTLI
Sbjct: 308 ANDVGGTLI 316


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 VGTNVGGTLI 10
+GTN+ GT++
Sbjct: 753 MGTNIIGTIV 762


>sp|Y1413_SULTO|PROTEIN STK_14130|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VGTNVGGTLI 10
+G +GGT+I
Sbjct: 252 IGVKLGGTII 261


>sp|FDHB2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 1 VGTNVGGTL 9
+G N GGT+
Sbjct: 118 IGLNCGGTV 126


>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 1 VGTNVGGTL 9
+G N GGT+
Sbjct: 120 IGLNCGGTV 128


>sp|Y1154_METLZ|UPF0173 metal-dependent hydrolase Mlab_1154|Methanocorpusculum labreanum

Query: 1 VGTNVGGTL 9
+G N+GG++
Sbjct: 75 IGMNIGGSV 83


>sp|Y3368_HALWD|UPF0173 metal-dependent hydrolase HQ_3368A|Haloquadratum walsbyi (strain

Query: 1 VGTNVGGTL 9
+G N+GGT+
Sbjct: 85 IGMNIGGTV 93


>sp|Y378_NANEQ|UPF0173 metal-dependent hydrolase NEQ378|Nanoarchaeum equitans (strain

Query: 1 VGTNVGGTL 9
+G N GGT+
Sbjct: 76 IGMNFGGTI 84


>sp|Y1117_AERPE|UPF0173 metal-dependent hydrolase APE_1117|Aeropyrum pernix (strain ATCC

Query: 1 VGTNVGGTLI 10
+G N+GG ++
Sbjct: 102 IGANIGGPVV 111




36|SequenceR|185|176|GVHKAVGTNV

>sp|Y609_METJA|UNCHARACTERIZED protein MJ0609|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VHKAVGTNV 10
+HKA+G N+
Sbjct: 76 IHKAIGDNI 84


>sp|NPD_HALMA|NAD-DEPENDENT protein deacetylase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GVHKAVGTN 9
G+H A GT+
Sbjct: 118 GLHDAAGTD 126


>sp|DCDA_THEAC|DIAMINOPIMELATE decarboxylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GVHKAVGTN 9
G+H +G+N
Sbjct: 188 GIHMMIGSN 196


>sp|GCH1L_PYRAB|GTP cyclohydrolase 1 type 2|Pyrococcus abyssi (strain GE5 /

Query: 2 VHKAVGTNV 10
VH VG NV
Sbjct: 101 VHPEVGNNV 109


>sp|SYT_STAMF|THREONINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 VHKAVGTNV 10
V+K +GTN+
Sbjct: 245 VYKVMGTNM 253




37|SequenceR|190|181|EKLADGVHKA

>sp|MSMJL_METJA|LARGE-CONDUCTANCE mechanosensitive channel MscMJLR|Methanocaldococcus jannaschii

Query: 1 EKLADGVHK 9
E+LAD +HK
Sbjct: 41 ERLADKLHK 49


>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 EKLADGVHK 9
EKLA+G+ K
Sbjct: 566 EKLAEGIEK 574


>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EKLADGVHK 9
EKLA+G+ K
Sbjct: 566 EKLAEGIEK 574


>sp|Y241_ARCFU|S-ADENOSYL-L-METHIONINE-BINDING protein AF_0241|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EKLADGVHK 9
++ ADG+HK
Sbjct: 36 DEYADGLHK 44


>sp|FRHA_METVO|COENZYME F420 hydrogenase subunit alpha|Methanococcus voltae

Query: 1 EKLADGVHKA 10
EKL GVH+A
Sbjct: 323 EKLGLGVHEA 332


>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 3 LADGVHK 9
L+DGVH+
Sbjct: 74 LSDGVHR 80


>sp|TREZ_SACSO|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (Sulfolobus

Query: 1 EKLADGVHK 9
E++AD VHK
Sbjct: 268 EEIADVVHK 276


>sp|HEM11_PYRAR|GLUTAMYL-TRNA reductase 1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 KLADGVHKA 10
K+A+GVH+
Sbjct: 24 KVANGVHRV 32


>sp|RS7_HALSA|SMALL ribosomal subunit protein uS7|Halobacterium salinarum (strain ATCC

Query: 3 LADGVHKA 10
LADG H A
Sbjct: 160 LADGAHSA 167


>sp|RS7_HALS3|SMALL ribosomal subunit protein uS7|Halobacterium salinarum (strain ATCC

Query: 3 LADGVHKA 10
LADG H A
Sbjct: 160 LADGAHSA 167


>sp|UVRB_METMA|UVRABC system protein B|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EKLADGVHKA 10
EKL DG+ K
Sbjct: 47 EKLVDGLKKG 56


>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 1 EKLADGVHK 9
E+LA+G+ K
Sbjct: 569 ERLAEGIEK 577


>sp|FPRA_METTH|COENZYME F420H(2) oxidase|Methanothermobacter thermautotrophicus (strain

Query: 1 EKLADGVH 8
EK+ADG++
Sbjct: 6 EKIADGLY 13


>sp|TREZ_SACS2|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EKLADGVHK 9
E +AD VHK
Sbjct: 270 EDIADVVHK 278




38|SequenceR|195|186|SRSAHEKLAD

>sp|TRPE_AERPE|ANTHRANILATE synthase component 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 SAHEKLAD 10
SA+E+LAD
Sbjct: 208 SAYERLAD 215


>sp|TRPF_METTH|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 SAHEKLAD 10
S+HE LAD
Sbjct: 3 SSHESLAD 10


>sp|TFE_HYPBU|TRANSCRIPTION factor E|Hyperthermus butylicus (strain DSM 5456

Query: 2 RSAHEKL 8
R+AHEKL
Sbjct: 96 RAAHEKL 102


>sp|THSB_AERPE|THERMOSOME subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 2 RSAHEK 7
RSAHEK
Sbjct: 474 RSAHEK 479


>sp|MTTB1_METMA|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 SAHEKLAD 10
+AHEK+ D
Sbjct: 456 AAHEKVVD 463




39|SequenceR|200|191|CIKRSSRSAH

***** No hits found ******


40|SequenceR|205|196|AIGITCIKRS

>sp|CSA1_SACS2|CRISPR-ASSOCIATED exonuclease Csa1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 AIGITCIKR 9
AIGI IKR
Sbjct: 84 AIGIEAIKR 92


>sp|IF6_THEPD|TRANSLATION initiation factor 6|Thermofilum pendens (strain DSM 2475

Query: 1 AIGITCIKRS 10
A+G+ CI+ S
Sbjct: 131 ALGVECIQMS 140


>sp|Y878_METJA|UNCHARACTERIZED lipoprotein MJ0878|Methanocaldococcus jannaschii (strain ATCC

Query: 1 AIGITCI 7
AIGI CI
Sbjct: 6 AIGILCI 12


>sp|RIFK_METAR|RIBOFLAVIN kinase|Methanocella arvoryzae (strain DSM 22066

Query: 3 GITCIK 8
GITC+K
Sbjct: 71 GITCLK 76




41|SequenceR|210|201|IVGWPAIGIT

>sp|DNLI_METTP|DNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 VGWPAIGIT 10
VGW A GIT
Sbjct: 458 VGWVATGIT 466


>sp|PSA_PYRAE|PROTEASOME subunit alpha|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GWPAIGI 9
GWP +G+
Sbjct: 35 GWPTVGV 41


>sp|PSA_SACS2|PROTEASOME subunit alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GWPAIGI 9
GW AIGI
Sbjct: 36 GWTAIGI 42


>sp|PSA_SACI7|PROTEASOME subunit alpha|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 GWPAIGI 9
GW AIGI
Sbjct: 36 GWTAIGI 42


>sp|PSA_SACI6|PROTEASOME subunit alpha|Saccharolobus islandicus (strain M.16.4 /

Query: 3 GWPAIGI 9
GW AIGI
Sbjct: 36 GWTAIGI 42


>sp|PSA_SACI4|PROTEASOME subunit alpha|Saccharolobus islandicus (strain M.14.25 /

Query: 3 GWPAIGI 9
GW AIGI
Sbjct: 36 GWTAIGI 42


>sp|PSA_SACI3|PROTEASOME subunit alpha|Saccharolobus islandicus (strain M.16.27)

Query: 3 GWPAIGI 9
GW AIGI
Sbjct: 36 GWTAIGI 42


>sp|PSA_SACI2|PROTEASOME subunit alpha|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 GWPAIGI 9
GW AIGI
Sbjct: 36 GWTAIGI 42


>sp|PSA_SACI1|PROTEASOME subunit alpha|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 GWPAIGI 9
GW AIGI
Sbjct: 36 GWTAIGI 42


>sp|RL22_METTP|LARGE ribosomal subunit protein uL22|Methanothrix thermoacetophila

Query: 1 IVGWPA 6
+VGWPA
Sbjct: 73 LVGWPA 78


>sp|MTNA_SULAC|PUTATIVE methylthioribose-1-phosphate isomerase|Sulfolobus acidocaldarius

Query: 1 IVGWPAIGIT 10
+ G PAIGIT
Sbjct: 64 VRGAPAIGIT 73


>sp|PRIS_THEAC|DNA primase small subunit PriS|Thermoplasma acidophilum (strain ATCC

Query: 3 GWPAI 7
GWPA+
Sbjct: 187 GWPAV 191


>sp|NEP1_METTP|RIBOSOMAL RNA small subunit methyltransferase|Methanothrix thermoacetophila

Query: 1 IVGWPAI 7
IVG+PA+
Sbjct: 18 IVGYPAV 24


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 4 WPAIGI 9
WP +GI
Sbjct: 802 WPKVGI 807


>sp|METK_THEON|S-ADENOSYLMETHIONINE synthase|Thermococcus onnurineus (strain NA1)

Query: 4 WPAIG 8
WPA+G
Sbjct: 195 WPAVG 199


>sp|MTNA_METTH|PUTATIVE methylthioribose-1-phosphate isomerase|Methanothermobacter

Query: 1 IVGWPAIGIT 10
+ G PAIG+T
Sbjct: 45 VRGAPAIGVT 54


>sp|CDC6_THEON|ORC1-TYPE DNA replication protein|Thermococcus onnurineus (strain NA1)

Query: 1 IVGWP 5
+VGWP
Sbjct: 127 LVGWP 131


>sp|CDC6_THEKO|ORC1-TYPE DNA replication protein|Thermococcus kodakarensis (strain ATCC

Query: 1 IVGWP 5
+VGWP
Sbjct: 127 LVGWP 131


>sp|CDC6_PYRHO|ORC1-TYPE DNA replication protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IVGWP 5
+VGWP
Sbjct: 130 LVGWP 134


>sp|CDC6_PYRAB|ORC1-TYPE DNA replication protein|Pyrococcus abyssi (strain GE5 /

Query: 1 IVGWP 5
+VGWP
Sbjct: 130 LVGWP 134


>sp|Y1111_HALSA|UNCHARACTERIZED GTP-binding protein VNG_1111G|Halobacterium salinarum (strain

Query: 1 IVGWPAIG 8
+VG+P++G
Sbjct: 66 LVGFPSVG 73


>sp|RL14_METST|LARGE ribosomal subunit protein uL14|Methanosphaera stadtmanae (strain

Query: 4 WPAIG 8
WPAIG
Sbjct: 121 WPAIG 125


>sp|GFCR_THEAC|TRANSCRIPTIONAL regulator GfcR|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VGWPAIGI 9
+GW ++G+
Sbjct: 54 IGWRSVGV 61




42|SequenceR|215|206|DNRNEIVGWP

>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DNRNEIVGW 9
D RN ++GW
Sbjct: 609 DERNPMIGW 617


>sp|RL11_PYRAE|LARGE ribosomal subunit protein uL11|Pyrobaculum aerophilum (strain

Query: 1 DNRNEIVG 8
D RNE++G
Sbjct: 89 DARNEVIG 96


>sp|SEPS_METTP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 RNEIVGWP 10
RNEI+G P
Sbjct: 441 RNEILGIP 448


>sp|SYC_PYRAE|CYSTEINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DNRNEIVGW 9
+N NE+V W
Sbjct: 122 ENVNEMVAW 130


>sp|RRP42_SACS2|EXOSOME complex component Rrp42|Saccharolobus solfataricus (strain ATCC

Query: 2 NRNEIVG 8
N+NE+VG
Sbjct: 183 NKNEVVG 189


>sp|RRP42_SACI7|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 NRNEIVG 8
N+NE+VG
Sbjct: 183 NKNEVVG 189


>sp|RRP42_SACI6|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.4 /

Query: 2 NRNEIVG 8
N+NE+VG
Sbjct: 183 NKNEVVG 189


>sp|RRP42_SACI4|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.14.25 /

Query: 2 NRNEIVG 8
N+NE+VG
Sbjct: 183 NKNEVVG 189


>sp|RRP42_SACI3|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.27)

Query: 2 NRNEIVG 8
N+NE+VG
Sbjct: 183 NKNEVVG 189


>sp|RRP42_SACI2|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 NRNEIVG 8
N+NE+VG
Sbjct: 183 NKNEVVG 189


>sp|RRP42_SACI1|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 NRNEIVG 8
N+NE+VG
Sbjct: 183 NKNEVVG 189


>sp|MTRA_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 1 DNRNEIVGWP 10
D R GWP
Sbjct: 3 DKREPAPGWP 12


>sp|TRPD_SACS2|ANTHRANILATE phosphoribosyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 DNRNEIVGW 9
+++NEIVG+
Sbjct: 50 ESKNEIVGF 58


>sp|TRPD_SACI7|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 1 DNRNEIVGW 9
+++NEIVG+
Sbjct: 50 ESKNEIVGF 58


>sp|TRPD_SACI6|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain M.16.4

Query: 1 DNRNEIVGW 9
+++NEIVG+
Sbjct: 50 ESKNEIVGF 58


>sp|TRPD_SACI4|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 1 DNRNEIVGW 9
+++NEIVG+
Sbjct: 50 ESKNEIVGF 58


>sp|TRPD_SACI3|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 1 DNRNEIVGW 9
+++NEIVG+
Sbjct: 50 ESKNEIVGF 58


>sp|TRPD_SACI2|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 1 DNRNEIVGW 9
+++NEIVG+
Sbjct: 50 ESKNEIVGF 58


>sp|TRPD_SACI1|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 1 DNRNEIVGW 9
+++NEIVG+
Sbjct: 50 ESKNEIVGF 58


>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 1 DNRNEIVGW 9
+ RN ++GW
Sbjct: 619 EERNPMIGW 627


>sp|SYDND_METMJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 EIVGW 9
EIVGW
Sbjct: 16 EIVGW 20


>sp|RL22_HALSA|LARGE ribosomal subunit protein uL22|Halobacterium salinarum (strain

Query: 2 NRNEIVGW 9
+RN+I GW
Sbjct: 69 HRNDIDGW 76


>sp|RS24_METPE|SMALL ribosomal subunit protein eS24|Methanosphaerula palustris (strain

Query: 1 DNRNEIVG 8
D RNE++G
Sbjct: 8 DTRNELLG 15


>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DNRNEIVGW 9
+ RN ++GW
Sbjct: 607 EERNPMLGW 615


>sp|RL22_NATPD|LARGE ribosomal subunit protein uL22|Natronomonas pharaonis (strain

Query: 2 NRNEIVGW 9
+RN+I GW
Sbjct: 69 HRNDIEGW 76


>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 1 DNRNEIVGW 9
+ RN ++GW
Sbjct: 610 EERNPMLGW 618


>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 DNRNEIVGW 9
+ RN ++GW
Sbjct: 607 EERNPMLGW 615


>sp|ENGB_META3|PROBABLE GTP-binding protein EngB|Methanococcus aeolicus (strain ATCC

Query: 1 DNRNEIVG 8
DN+++IVG
Sbjct: 108 DNKDQIVG 115


>sp|AATB_HALWD|A-TYPE ATP synthase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DNRNEIVG 8
D R EIVG
Sbjct: 104 DERREIVG 111




43|SequenceR|220|211|DRGVLDNRNE

>sp|GSA_METTP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DRGVLDNRNE 10
+RGVLD NE
Sbjct: 323 ERGVLDRINE 332


>sp|TMBL1_PYRFU|HTH-TYPE sugar sensing transcriptional regulator|Pyrococcus furiosus (strain

Query: 2 RGVLDNRNE 10
RGVL+ RN+
Sbjct: 150 RGVLEKRND 158


>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 1 DRGVLDNRN 9
+RG+LD +N
Sbjct: 33 ERGLLDGKN 41


>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DRGVLDNRNE 10
D+G+ DN NE
Sbjct: 388 DKGLPDNTNE 397




44|SequenceR|225|216|YPAVVDRGVL

>sp|CDC6_PYRFU|ORC1-TYPE DNA replication protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YPAVVDRGVL 10
YP V+D GV+
Sbjct: 239 YPGVLDEGVI 248


>sp|CDC6_PYRHO|ORC1-TYPE DNA replication protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YPAVVDRGVL 10
YP V+D GV+
Sbjct: 238 YPGVLDDGVI 247


>sp|M556_METJA|METHYLATED protein MJ0556|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PAVVDRGVL 10
P V DRGV+
Sbjct: 58 PVVDDRGVM 66


>sp|Y006_METJA|UNCHARACTERIZED oxidoreductase MJ0006|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PAVVDRGVL 10
PA+VD+ VL
Sbjct: 278 PALVDKDVL 286


>sp|BACH_HALSA|HALORHODOPSIN salinarum (strain ATCC 700922

Query: 2 PAVVDRGVL 10
P VVD GVL
Sbjct: 7 PGVVDAGVL 15


>sp|BACH_HALS3|HALORHODOPSIN salinarum (strain ATCC 29341

Query: 2 PAVVDRGVL 10
P VVD GVL
Sbjct: 7 PGVVDAGVL 15


>sp|PDXS_PYRAE|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum aerophilum (strain

Query: 1 YPAVVDRGVL 10
+PA++ RGV+
Sbjct: 53 FPAMLKRGVI 62


>sp|RRP42_ARCFU|EXOSOME complex component Rrp42|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YPAVVDRGVL 10
YP DRGV+
Sbjct: 70 YPDTPDRGVI 79


>sp|RL10_META3|LARGE ribosomal subunit protein uL10|Methanococcus aeolicus (strain ATCC

Query: 2 PAVVDRG 8
PAV+D+G
Sbjct: 150 PAVIDKG 156


>sp|CDC6_PYRAB|ORC1-TYPE DNA replication protein|Pyrococcus abyssi (strain GE5 /

Query: 1 YPAVVDRGVL 10
YP V++ GV+
Sbjct: 238 YPGVLEEGVI 247


>sp|CETZ_METTP|TUBULIN-LIKE protein CetZ|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 YPAVVDRG 8
YPA VD G
Sbjct: 261 YPANVDAG 268


>sp|Y433_ARCFU|PROBABLE S-adenosyl-L-methionine-binding protein AF_0433|Archaeoglobus

Query: 1 YPAVVDRGVL 10
Y AVV RG++
Sbjct: 347 YYAVVGRGIV 356


>sp|GLMS_PYRAE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrobaculum aerophilum (strain

Query: 3 AVVDRGVL 10
AVVDRG++
Sbjct: 39 AVVDRGLV 46


>sp|SYL_HALSA|LEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PAVVDRGV 9
PAVV RGV
Sbjct: 694 PAVVARGV 701


>sp|HIS6_HALSA|IMIDAZOLE glycerol phosphate synthase subunit|Halobacterium salinarum (strain

Query: 2 PAVVDRGV 9
P++VDRG
Sbjct: 116 PSLVDRGA 123


>sp|HIS6_HALS3|IMIDAZOLE glycerol phosphate synthase subunit|Halobacterium salinarum (strain

Query: 2 PAVVDRGV 9
P++VDRG
Sbjct: 116 PSLVDRGA 123


>sp|HMDX_METJA|H(2)-FORMING methylenetetrahydromethanopterin dehydrogenase-related protein

Query: 2 PAVVDRGVL 10
PAV D G L
Sbjct: 198 PAVADMGAL 206




45|SequenceR|230|221|NLLTQYPAVV

>sp|CAPPA_PYRAB|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 NLLTQYPAV 9
N+L++YP+V
Sbjct: 266 NVLSEYPSV 274


>sp|CAPPA_SULTO|PHOSPHOENOLPYRUVATE carboxylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LLTQYP 7
LLTQYP
Sbjct: 65 LLTQYP 70


>sp|FAEHP_ARCFU|BIFUNCTIONAL enzyme Fae/Hps|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NLLTQYPAVV 10
NL+T+ PAV+
Sbjct: 55 NLITKPPAVI 64


>sp|Y1521_ARCFU|ADP-RIBOSE glycohydrolase AF_1521|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LTQYPA 8
+TQYPA
Sbjct: 21 ITQYPA 26


>sp|UVRC_METTH|UVRABC system protein C|Methanothermobacter thermautotrophicus (strain

Query: 2 LLTQYP 7
+LTQYP
Sbjct: 302 ILTQYP 307




46|SequenceR|235|226|LKSLPNLLTQ

>sp|KDPQ_HALS3|PROBABLE Kdp system regulatory protein|Halobacterium salinarum (strain

Query: 2 KSLPNLLTQ 10
KS PN+LT+
Sbjct: 19 KSDPNMLTE 27


>sp|RFCS_METTH|REPLICATION factor C small subunit|Methanothermobacter thermautotrophicus

Query: 2 KSLPNLL 8
KS+PNL+
Sbjct: 37 KSMPNLM 43


>sp|SYS_SACI6|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LKSLPNLL 8
L SLPNL+
Sbjct: 101 LSSLPNLV 108


>sp|SYS_SACI4|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LKSLPNLL 8
L SLPNL+
Sbjct: 101 LSSLPNLV 108


>sp|SYS_SACI3|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 LKSLPNLL 8
L SLPNL+
Sbjct: 101 LSSLPNLV 108


>sp|SYS_SACI2|SERINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LKSLPNLL 8
L SLPNL+
Sbjct: 101 LSSLPNLV 108


>sp|SYS_SACI1|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LKSLPNLL 8
L SLPNL+
Sbjct: 101 LSSLPNLV 108


>sp|RFCS_METST|REPLICATION factor C small subunit|Methanosphaera stadtmanae (strain ATCC

Query: 2 KSLPNLL 8
KSLPN++
Sbjct: 34 KSLPNIM 40


>sp|SYS_SACS2|SERINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LKSLPNLL 8
L SLPNL+
Sbjct: 101 LSSLPNLV 108




47|SequenceR|240|231|NNLVNLKSLP

>sp|MCH_META3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 VNLKSLP 10
VNLKSLP
Sbjct: 4 VNLKSLP 10


>sp|TRMY_META3|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus aeolicus

Query: 1 NNLVNLKSLP 10
N +NLK LP
Sbjct: 14 NGEINLKDLP 23


>sp|TRMY_METM7|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 1 NNLVNLKSLP 10
N +NLK LP
Sbjct: 14 NGEINLKDLP 23


>sp|TRMY_METM6|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 1 NNLVNLKSLP 10
N +NLK LP
Sbjct: 14 NGEINLKDLP 23


>sp|TRMY_METMP|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 1 NNLVNLKSLP 10
N +NLK LP
Sbjct: 14 NGEINLKDLP 23


>sp|TRMY_METVS|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 1 NNLVNLKSLP 10
N +NLK LP
Sbjct: 14 NGEINLKDLP 23


>sp|TRMY_METM5|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 1 NNLVNLKSLP 10
N +NLK LP
Sbjct: 14 NGEINLKDLP 23




48|SequenceR|245|236|FHSHLNNLVN

>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 FHSHLNNLVN 10
F++HLN L+N
Sbjct: 379 FNTHLNYLIN 388


>sp|RL6_METMA|LARGE ribosomal subunit protein uL6|Methanosarcina mazei (strain ATCC

Query: 1 FHSHLNNLV 9
F SHL NL+
Sbjct: 69 FASHLKNLI 77


>sp|RL6_THEKO|LARGE ribosomal subunit protein uL6|Thermococcus kodakarensis (strain

Query: 1 FHSHLNNLV 9
F +H+NN++
Sbjct: 71 FKAHINNMI 79


>sp|RL6_THEGJ|LARGE ribosomal subunit protein uL6|Thermococcus gammatolerans (strain

Query: 1 FHSHLNNLV 9
F +H+NN++
Sbjct: 71 FKAHINNMI 79


>sp|RL6_PYRHO|LARGE ribosomal subunit protein uL6|Pyrococcus horikoshii (strain ATCC

Query: 1 FHSHLNNLV 9
F +H+NN++
Sbjct: 71 FKAHINNMI 79


>sp|RL6_PYRAB|LARGE ribosomal subunit protein uL6|Pyrococcus abyssi (strain GE5 /

Query: 1 FHSHLNNLV 9
F +H+NN++
Sbjct: 71 FKAHINNMI 79


>sp|COFH2_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina acetivorans (strain

Query: 1 FHSHLNNL 8
H+H+NN+
Sbjct: 284 LHTHVNNI 291


>sp|RL6_METAC|LARGE ribosomal subunit protein uL6|Methanosarcina acetivorans (strain

Query: 1 FHSHLNNLV 9
F SH+ NLV
Sbjct: 69 FASHIRNLV 77


>sp|RL6_HALWD|LARGE ribosomal subunit protein uL6|Haloquadratum walsbyi (strain DSM

Query: 1 FHSHLNNLVN 10
F SH++N+++
Sbjct: 70 FESHVSNMIH 79


>sp|CDC68_HALSA|ORC1-TYPE DNA replication protein 8|Halobacterium salinarum (strain ATCC

Query: 2 HSHLNNL 8
H HLN+L
Sbjct: 347 HDHLNDL 353


>sp|SYT_HALWD|THREONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 FHSHLNN 7
FHSHL +
Sbjct: 621 FHSHLKS 627


>sp|PELO_METMJ|PROTEIN pelota homolog|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FHSHLNNL 8
FH H N L
Sbjct: 74 FHQHTNRL 81


>sp|Y755_METJA|UNCHARACTERIZED protein MJ0755|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FHSHLNNLVN 10
+H ++NNL N
Sbjct: 306 YHQNINNLTN 315


>sp|ARGC_METLZ|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 HSHLNNLVN 10
H HL NL++
Sbjct: 45 HIHLKNLID 53


>sp|COBS_SULTO|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FHSHLNN 7
FH +LNN
Sbjct: 165 FHKNLNN 171


>sp|Y1188_METJA|UNCHARACTERIZED protein MJ1188|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HSHLNNLVN 10
H+H++ +VN
Sbjct: 198 HTHISGVVN 206




49|SequenceR|250|241|DDVLIFHSHL

>sp|CCA_AERPE|CCA-ADDING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 DDVLIFHSHL 10
DD+L+F S L
Sbjct: 165 DDILLFKSFL 174


>sp|JAMM1_PYRFU|DESAMPYLASE furiosus (strain ATCC 43587

Query: 3 VLIFHSHL 10
V IFHSH+
Sbjct: 84 VGIFHSHI 91


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 2 DVLIFHSHL 10
DVL F +HL
Sbjct: 732 DVLTFRNHL 740


>sp|SYT_HALWD|THREONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DVLIFHSHL 10
D+ FHSHL
Sbjct: 617 DLSTFHSHL 625


>sp|NUCS_METTH|ENDONUCLEASE NucS|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 DVLIFHSHL 10
D++I H HL
Sbjct: 138 DMIIMHPHL 146


>sp|Y2093_ARCFU|UNCHARACTERIZED protein AF_2093|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DVLIFHSHL 10
DVL +H H+
Sbjct: 75 DVLFYHPHV 83


>sp|Y1194_METTH|PROBABLE deacetylase MTH_1194|Methanothermobacter thermautotrophicus

Query: 1 DDVLIFHS 8
DD+L+ HS
Sbjct: 49 DDILMVHS 56


>sp|Y1671_PYRHO|UPF0173 metal-dependent hydrolase PH1671|Pyrococcus horikoshii (strain ATCC

Query: 1 DDVLIFHS 8
DDV I+H+
Sbjct: 130 DDVTIYHA 137


>sp|PSB2_NITMS|PROTEASOME subunit beta 2|Nitrosopumilus maritimus (strain SCM1)

Query: 2 DVLIFHSHL 10
D+L +HS+L
Sbjct: 69 DILRYHSNL 77




50|SequenceR|255|246|KGVTGDDVLI

>sp|RFCS_THEKO|REPLICATION factor C small subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 KGVTGDDVLI 10
+G++G+DVLI
Sbjct: 805 QGLSGEDVLI 814


>sp|RFCS_PYRHO|REPLICATION factor C small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KGVTGDDVLI 10
+G++G+DVLI
Sbjct: 792 QGLSGEDVLI 801


>sp|RFCS_PYRFU|REPLICATION factor C small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KGVTGDDVLI 10
+G++G+DVL+
Sbjct: 790 QGLSGEDVLV 799


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 KGVTGDDVLI 10
+G++G+DVL+
Sbjct: 1374 QGLSGEDVLV 1383


>sp|HIS1_ARCFU|ATP phosphoribosyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 2 GVTGDDVL 9
G+TG+D+L
Sbjct: 18 GITGEDIL 25


>sp|RFCS_METST|REPLICATION factor C small subunit|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KGVTGDDVL 9
+GV+GDD++
Sbjct: 254 EGVSGDDLI 262


>sp|RS3_AERPE|SMALL ribosomal subunit protein uS3|Aeropyrum pernix (strain ATCC 700893

Query: 1 KGVTGDDVLI 10
KGV G DV+I
Sbjct: 175 KGVIGVDVII 184


>sp|RFCS_METM7|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C7 /

Query: 2 GVTGDDVLI 10
G++G+D+LI
Sbjct: 256 GMSGEDILI 264


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 VTGDDVLI 10
VTGD+V+I
Sbjct: 300 VTGDEVII 307


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 VTGDDVLI 10
VTGD+V+I
Sbjct: 300 VTGDEVII 307


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VTGDDVLI 10
VTGD+V+I
Sbjct: 300 VTGDEVII 307


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 VTGDDVLI 10
VTGD+V+I
Sbjct: 300 VTGDEVII 307


>sp|RFCS_METMP|REPLICATION factor C small subunit|Methanococcus maripaludis (strain DSM 14266

Query: 2 GVTGDDVLI 10
G++G+D+LI
Sbjct: 256 GMSGEDILI 264


>sp|RFCS_METM5|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C5 /

Query: 2 GVTGDDVLI 10
G++G+D+LI
Sbjct: 256 GMSGEDILI 264


>sp|RFCS_METM6|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C6 /

Query: 2 GVTGDDVLI 10
G++G+D+LI
Sbjct: 256 GMSGEDILI 264


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GVTGDDVL 9
GV GDD++
Sbjct: 547 GVIGDDII 554


>sp|Y1357_HALVD|PUTATIVE transcriptional regulator HVO_1357|Haloferax volcanii (strain

Query: 3 VTGDDVL 9
VTGDDVL
Sbjct: 73 VTGDDVL 79


>sp|Y685_PYRNV|UPF0201 protein Tneu_0685|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 KGVTGDDVLI 10
KGV G+D ++
Sbjct: 74 KGVVGEDTVV 83


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 VTGDDVLI 10
VTGD+++I
Sbjct: 289 VTGDEIII 296


>sp|Y593_PYRCJ|UPF0201 protein Pcal_0593|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 KGVTGDDVLI 10
KGV G+D +I
Sbjct: 74 KGVVGEDTVI 83


>sp|GSA_METM6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C6 /

Query: 1 KGVTGDDVLI 10
+GVTG D +I
Sbjct: 130 RGVTGKDKII 139


>sp|AATA_IGNH4|A-TYPE ATP synthase subunit A|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 VTGDDVL 9
V+GDD+L
Sbjct: 133 VSGDDIL 139


>sp|PUS10_NITMS|TRNA pseudouridine synthase Pus10|Nitrosopumilus maritimus (strain SCM1)

Query: 3 VTGDDV 8
VTGDDV
Sbjct: 351 VTGDDV 356


>sp|ATGT_HALSA|TRNA-GUANINE(15) transglycosylase|Halobacterium salinarum (strain ATCC 700922

Query: 3 VTGDDVLI 10
V GDDVL+
Sbjct: 392 VDGDDVLL 399


>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 2 GVTGDDVL 9
GVT DD++
Sbjct: 240 GVTADDLI 247


>sp|RPO1C_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus shibatae (strain ATCC

Query: 1 KGVTGDDV 8
KGVT DDV
Sbjct: 174 KGVTVDDV 181


>sp|RPO1C_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 KGVTGDDV 8
KGVT DDV
Sbjct: 174 KGVTVDDV 181


>sp|RPO1C_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 KGVTGDDV 8
KGVT DDV
Sbjct: 174 KGVTVDDV 181


>sp|RPO1C_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 KGVTGDDV 8
KGVT DDV
Sbjct: 174 KGVTVDDV 181


>sp|RPO1C_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 KGVTGDDV 8
KGVT DDV
Sbjct: 174 KGVTVDDV 181


>sp|RPO1C_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 KGVTGDDV 8
KGVT DDV
Sbjct: 174 KGVTVDDV 181


>sp|RPO1C_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 1 KGVTGDDV 8
KGVT DDV
Sbjct: 174 KGVTVDDV 181


>sp|RPO1C_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus solfataricus (strain

Query: 1 KGVTGDDV 8
KGVT DDV
Sbjct: 174 KGVTVDDV 181


>sp|Y1676_METJA|UNCHARACTERIZED protein MJ1676|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VTGDDVLI 10
+TGDD++I
Sbjct: 47 ITGDDIVI 54


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 2 GVTGDDVLI 10
G TGD V+I
Sbjct: 638 GTTGDTVVI 646


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 2 GVTGDDVLI 10
G TGD V+I
Sbjct: 638 GTTGDTVVI 646


>sp|TRPD_METVS|ANTHRANILATE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 1 KGVTGDDV 8
KGVT D++
Sbjct: 41 KGVTADEI 48


>sp|GATE_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Aeropyrum pernix (strain ATCC 700893

Query: 2 GVTGDDV 8
G+TGD+V
Sbjct: 358 GITGDEV 364


>sp|TRPD_METM7|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 KGVTGDDV 8
KGVT D++
Sbjct: 41 KGVTADEI 48


>sp|TRPD_METM5|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 KGVTGDDV 8
KGVT D++
Sbjct: 41 KGVTADEI 48


>sp|Y1504_ARCFU|UNCHARACTERIZED protein AF_1504|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KGVTGDDVL 9
KG+ DDVL
Sbjct: 43 KGIIPDDVL 51




51|SequenceR|260|251|VEAGYKGVTG

>sp|PIMT_METMA|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EAGYKGVT 9
EAGYK VT
Sbjct: 150 EAGYKNVT 157


>sp|DAPAL_PYRAR|UNCHARACTERIZED DapA-like lyase Pars_0992|Pyrobaculum arsenaticum (strain DSM

Query: 1 VEAGYKGV 8
VEAGY GV
Sbjct: 32 VEAGYHGV 39


>sp|DAPAL_PYRAE|UNCHARACTERIZED DapA-like lyase PAE2915|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VEAGYKGV 8
VEAGY GV
Sbjct: 32 VEAGYHGV 39


>sp|RPO2C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 1 VEAGYKGVTG 10
VE+ Y G+TG
Sbjct: 452 VESLYNGITG 461


>sp|Y3226_SACS2|UNCHARACTERIZED aldolase SSO3226|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VEAGYKGVT 9
+EAG KGVT
Sbjct: 228 LEAGAKGVT 236


>sp|GATE_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfurisphaera tokodaii (strain DSM

Query: 3 AGYKGVTG 10
AG+KG+ G
Sbjct: 315 AGFKGIFG 322


>sp|RPO2C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 1 VEAGYKGVTG 10
VE Y G+TG
Sbjct: 453 VETLYNGITG 462


>sp|GATD_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Aeropyrum pernix (strain ATCC 700893

Query: 1 VEAGYKGV 8
+EAGY GV
Sbjct: 147 LEAGYDGV 154


>sp|HIS7_METS5|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VEAGYKGV 8
VEA +KGV
Sbjct: 164 VEAAFKGV 171


>sp|DCD_SULTO|DCTP deaminase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VEAGYKG 7
V+AG+KG
Sbjct: 112 VDAGFKG 118


>sp|DCD_SACS2|DCTP deaminase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VEAGYKG 7
V+AG+KG
Sbjct: 112 VDAGFKG 118


>sp|ASPG_PYRFU|L-ASPARAGINASE furiosus (strain ATCC 43587

Query: 1 VEAGYKGV 8
VE GY+G+
Sbjct: 220 VELGYRGI 227


>sp|GATD_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain C7 /

Query: 1 VEAGYKGV 8
V+ GYKG+
Sbjct: 309 VDKGYKGI 316


>sp|DAPAL_PYRNV|UNCHARACTERIZED DapA-like lyase Tneu_1812|Pyrobaculum neutrophilum (strain DSM

Query: 1 VEAGYKGV 8
VE GY+GV
Sbjct: 32 VEEGYQGV 39


>sp|AATA_CENSY|A-TYPE ATP synthase subunit A|Cenarchaeum symbiosum (strain A)

Query: 1 VEAGYKGVTG 10
++ YKG+TG
Sbjct: 578 MDEQYKGITG 587


>sp|RL30_IGNH4|LARGE ribosomal subunit protein uL30|Ignicoccus hospitalis (strain KIN4/I

Query: 2 EAGYKG 7
EAGY+G
Sbjct: 143 EAGYRG 148


>sp|SECY_PYRFU|PROTEIN translocase subunit SecY|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GYKGVT 9
GY+GVT
Sbjct: 267 GYRGVT 272


>sp|ILVC_METST|KETOL-ACID reductoisomerase (NADP(+))|Methanosphaera stadtmanae (strain ATCC

Query: 1 VEAGYK 6
VEAGYK
Sbjct: 214 VEAGYK 219


>sp|TRM1_PYRAR|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum arsenaticum

Query: 1 VEAGYKGVTG 10
+EAG + +TG
Sbjct: 184 IEAGLRNLTG 193


>sp|DCD_IGNH4|DCTP deaminase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VEAGYKG 7
V+AG+KG
Sbjct: 116 VDAGFKG 122


>sp|SECY_PYRHO|PROTEIN translocase subunit SecY|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GYKGVT 9
GY+GVT
Sbjct: 267 GYRGVT 272


>sp|SECY_PYRAB|PROTEIN translocase subunit SecY|Pyrococcus abyssi (strain GE5 /

Query: 4 GYKGVT 9
GY+GVT
Sbjct: 267 GYRGVT 272




52|SequenceR|265|256|ERRLRVEAGY

>sp|AROE_CALMQ|SHIKIMATE dehydrogenase (NADP(+))|Caldivirga maquilingensis (strain ATCC

Query: 2 RRLRVEAGY 10
+RLR++A Y
Sbjct: 25 KRLRIDAAY 33


>sp|Y182_AERPE|UPF0235 protein APE_0182.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 ERRLRVEAG 9
ERRLR+E G
Sbjct: 31 ERRLRLEEG 39


>sp|GCST_THEKO|PROBABLE aminomethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 4 LRVEAGY 10
LR+EAGY
Sbjct: 251 LRLEAGY 257


>sp|GCST_THEON|PROBABLE aminomethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 4 LRVEAGY 10
LR+EAGY
Sbjct: 251 LRLEAGY 257


>sp|GCST_PYRFU|PROBABLE aminomethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 LRVEAGY 10
LR+EAGY
Sbjct: 251 LRLEAGY 257


>sp|GCST_PYRHO|PROBABLE aminomethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 LRVEAGY 10
LR+EAGY
Sbjct: 251 LRLEAGY 257


>sp|GCST_PYRAB|PROBABLE aminomethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 4 LRVEAGY 10
LR+EAGY
Sbjct: 251 LRLEAGY 257


>sp|GCST_THEGJ|PROBABLE aminomethyltransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 4 LRVEAGY 10
LR+EAGY
Sbjct: 251 LRLEAGY 257


>sp|PSB1_THEPD|PROTEASOME subunit beta 1|Thermofilum pendens (strain DSM 2475

Query: 3 RLRVEAGY 10
RLRVEA Y
Sbjct: 70 RLRVEARY 77


>sp|Y1056_AERPE|PROTEIN APE_1056.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 RRLRVEAG 9
RRL VEAG
Sbjct: 44 RRLDVEAG 51


>sp|GCST_AERPE|PROBABLE aminomethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 4 LRVEAGY 10
LR+EAG+
Sbjct: 233 LRIEAGF 239




53|SequenceR|270|261|ITKELERRLR

>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 ITKELERRLR 10
+T+EL++RLR
Sbjct: 536 MTQELDKRLR 545


>sp|SRP54_THEVO|SIGNAL recognition particle 54 kDa|Thermoplasma volcanium (strain ATCC

Query: 1 ITKELERR 8
ITKE+ERR
Sbjct: 52 ITKEMERR 59


>sp|HIS2_PYRAE|PHOSPHORIBOSYL-ATP pyrophosphatase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ITKELERRLR 10
+ KELERR++
Sbjct: 85 VCKELERRMK 94


>sp|SRP54_THEAC|SIGNAL recognition particle 54 kDa|Thermoplasma acidophilum (strain ATCC

Query: 1 ITKELERR 8
+TKE+ERR
Sbjct: 52 VTKEMERR 59


>sp|RL10_SULTO|LARGE ribosomal subunit protein uL10|Sulfurisphaera tokodaii (strain

Query: 3 KELERRLR 10
KELE++LR
Sbjct: 19 KELEQKLR 26


>sp|HIS2_PYRCJ|PHOSPHORIBOSYL-ATP pyrophosphatase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ITKELERRLR 10
+ KELERR++
Sbjct: 85 VCKELERRMK 94


>sp|AROC_PYRNV|CHORISMATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 ITKELERRL 9
I +ELERR+
Sbjct: 39 IKRELERRM 47


>sp|AROC_PYRIL|CHORISMATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ITKELERRL 9
I +ELERR+
Sbjct: 39 IKRELERRM 47


>sp|HIS2_SULAC|PHOSPHORIBOSYL-ATP pyrophosphatase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ITKELERRLR 10
+ KELERR++
Sbjct: 85 VYKELERRMK 94


>sp|AROC_PYRAE|CHORISMATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ITKELERRL 9
I +ELERR+
Sbjct: 39 IKRELERRM 47


>sp|RBL_ARCFU|RIBULOSE bisphosphate carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KELERRLR 10
+E+ERRL+
Sbjct: 232 REMERRLK 239


>sp|KITH_HALWD|THYMIDINE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 TKELERRLR 10
T+EL RRLR
Sbjct: 22 TEELLRRLR 30


>sp|Y403_METJA|MEMO1 family protein MJ0403|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ITKELERRL 9
I KEL RR+
Sbjct: 184 IAKELNRRI 192


>sp|KCY_HALSA|CYTIDYLATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ITKELERRLR 10
I K+L+RRLR
Sbjct: 59 IDKDLDRRLR 68


>sp|KCY_HALS3|CYTIDYLATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 ITKELERRLR 10
I K+L+RRLR
Sbjct: 59 IDKDLDRRLR 68


>sp|AROC_PYRAR|CHORISMATE synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ITKELERRL 9
I KEL+RR+
Sbjct: 39 IRKELDRRM 47


>sp|COBQ_METKA|PROBABLE cobyric acid synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 KELERRL 9
KELERRL
Sbjct: 210 KELERRL 216


>sp|AROC_PYRCJ|CHORISMATE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ITKELERRL 9
+ +ELERR+
Sbjct: 39 VKRELERRM 47


>sp|HIS2_IGNH4|PHOSPHORIBOSYL-ATP pyrophosphatase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 ITKELERRLR 10
+ KELERR R
Sbjct: 84 VIKELERRSR 93


>sp|HIS2_PYRIL|PHOSPHORIBOSYL-ATP pyrophosphatase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ITKELERRLR 10
+ ELERR+R
Sbjct: 85 VCAELERRMR 94


>sp|KITH_HALSA|THYMIDINE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 TKELERRLR 10
T+EL RRLR
Sbjct: 22 TEELLRRLR 30


>sp|KITH_HALS3|THYMIDINE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 2 TKELERRLR 10
T+EL RRLR
Sbjct: 22 TEELLRRLR 30


>sp|AROC_PYRAB|CHORISMATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 ITKELERR 8
+ KELERR
Sbjct: 37 LVKELERR 44


>sp|TRET_THELN|TREHALOSE synthase|Thermococcus litoralis (strain ATCC 51850

Query: 1 ITKELERRL 9
ITK LER L
Sbjct: 398 ITKHLERYL 406


>sp|TRET_PYRFU|TREHALOSE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ITKELERRL 9
ITK LER L
Sbjct: 398 ITKHLERYL 406


>sp|RKD4_PYRCJ|ARCADIN-4 calidifontis (strain DSM 21063

Query: 2 TKELERRLR 10
KELE RLR
Sbjct: 554 VKELEERLR 562


>sp|CMR3_PYRFU|CRISPR system Cmr subunit Cmr3|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ITKELERRLR 10
I +ELE+RL
Sbjct: 241 IVQELEKRLN 250


>sp|AROC_AERPE|CHORISMATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ITKELERR 8
I +ELERR
Sbjct: 42 INRELERR 49




54|SequenceR|275|266|IRQQNITKEL

>sp|ASSY_METHJ|ARGININOSUCCINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 IRQQNITKE 9
IR++N+T+E
Sbjct: 143 IRERNMTRE 151


>sp|GGGPS_METAR|GERANYLGERANYLGLYCERYL phosphate synthase|Methanocella arvoryzae (strain DSM 22066

Query: 4 QNITKE 9
QNITKE
Sbjct: 43 QNITKE 48


>sp|IF2P_THEON|PROBABLE translation initiation factor IF-2|Thermococcus onnurineus (strain

Query: 2 RQQNITKEL 10
R QN T+EL
Sbjct: 185 RVQNFTREL 193




55|SequenceR|280|271|GIRAHIRQQN

>sp|TOP6B_HALMA|TYPE 2 DNA topoisomerase 6|Haloarcula marismortui (strain ATCC 43049

Query: 1 GIRAHIRQQN 10
G R H R+QN
Sbjct: 108 GSRFHAREQN 117


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 1 GIRAHIRQQ 9
G RAHI +Q
Sbjct: 464 GFRAHIVEQ 472


>sp|RAD50_HALSA|DNA double-strand break repair Rad50|Halobacterium salinarum (strain

Query: 2 IRAHIRQQN 10
+RA +RQQN
Sbjct: 727 LRAELRQQN 735


>sp|RAD50_HALVD|DNA double-strand break repair Rad50|Haloferax volcanii (strain ATCC

Query: 2 IRAHIRQQN 10
+RA +RQ+N
Sbjct: 728 LRAELRQRN 736




56|SequenceR|285|276|VPVGQGIRAH

>sp|SECE_METAC|PROTEIN translocase subunit SecE|Methanosarcina acetivorans (strain ATCC

Query: 3 VGQGIRAH 10
VGQ IRAH
Sbjct: 15 VGQAIRAH 22


>sp|SECE_METMA|PROTEIN translocase subunit SecE|Methanosarcina mazei (strain ATCC

Query: 3 VGQGIRAH 10
VGQ IRAH
Sbjct: 15 VGQAIRAH 22


>sp|Y807_METJA|PUTATIVE lyase MJ0807|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VPVGQGIRAH 10
+P+G+ IR H
Sbjct: 109 IPIGKIIRKH 118


>sp|PYRI_THEAC|ASPARTATE carbamoyltransferase regulatory chain|Thermoplasma acidophilum

Query: 1 VPVGQGIR 8
VP G+GIR
Sbjct: 19 VPSGKGIR 26


>sp|APGM_PICTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Picrophilus torridus (strain ATCC 700027

Query: 2 PVGQGIRA 9
PVG GIR+
Sbjct: 48 PVGPGIRS 55


>sp|SECE_METBF|PROTEIN translocase subunit SecE|Methanosarcina barkeri (strain Fusaro /

Query: 3 VGQGIRAH 10
VGQ IRAH
Sbjct: 15 VGQVIRAH 22


>sp|AROK_PYRAB|SHIKIMATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 VPVGQGIRA 9
+PVG+G+++
Sbjct: 85 IPVGKGLKS 93


>sp|AROK_PYRFU|SHIKIMATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VPVGQGIRA 9
+PVG+G+++
Sbjct: 84 IPVGKGLKS 92


>sp|COBS_PYRAB|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 PVGQGIRAH 10
P+GQG+ A+
Sbjct: 141 PLGQGLGAY 149


>sp|AMPPA_METM7|AMP phosphorylase|Methanococcus maripaludis (strain C7 /

Query: 1 VPVGQGIR 8
+PVG+G++
Sbjct: 283 IPVGKGVK 290


>sp|AMPPA_METM5|AMP phosphorylase|Methanococcus maripaludis (strain C5 /

Query: 1 VPVGQGIR 8
+PVG+G++
Sbjct: 283 IPVGKGVK 290


>sp|THIC_PYRFU|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VPVGQGIR 8
V VGQG+R
Sbjct: 53 VAVGQGVR 60


>sp|AMPPA_METMP|AMP phosphorylase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VPVGQGIR 8
+PVG+G++
Sbjct: 283 IPVGKGVK 290


>sp|AMPPA_METM6|AMP phosphorylase|Methanococcus maripaludis (strain C6 /

Query: 1 VPVGQGIR 8
+PVG+G++
Sbjct: 283 IPVGKGVK 290


>sp|AROK_THEGJ|SHIKIMATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VPVGQGIRA 9
+PVG+G+++
Sbjct: 84 IPVGKGLKS 92


>sp|AMPPA_METVS|AMP phosphorylase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VPVGQGIR 8
+PVG+G++
Sbjct: 283 IPVGKGVK 290


>sp|COBS_THEON|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermococcus onnurineus (strain NA1)

Query: 2 PVGQGIRAH 10
P+GQG+ A+
Sbjct: 141 PLGQGLGAY 149


>sp|COBS_THEGJ|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 PVGQGIRAH 10
P+GQG+ A+
Sbjct: 141 PLGQGLGAY 149


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 1 VPVGQGIR 8
VP GQG R
Sbjct: 111 VPAGQGRR 118


>sp|PFDA_THEAC|PREFOLDIN subunit alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VPVGQGI 7
VP+G GI
Sbjct: 73 VPIGSGI 79


>sp|RPO1C_THEON|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus onnurineus (strain NA1)

Query: 1 VPVGQGI 7
VPVG GI
Sbjct: 371 VPVGTGI 377


>sp|PFDA_PICTO|PREFOLDIN subunit alpha|Picrophilus torridus (strain ATCC 700027

Query: 1 VPVGQGI 7
VPVG G+
Sbjct: 78 VPVGSGV 84


>sp|RPO1C_THEGJ|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus gammatolerans (strain DSM

Query: 1 VPVGQGI 7
VPVG GI
Sbjct: 371 VPVGTGI 377


>sp|RPO1C_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus kodakarensis (strain ATCC

Query: 1 VPVGQGI 7
VPVG GI
Sbjct: 371 VPVGTGI 377


>sp|AMPPA_META3|AMP phosphorylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VPVGQGIR 8
+PVG G++
Sbjct: 282 IPVGYGVK 289


>sp|CBID_METBU|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VPVGQGIRAH 10
VP G+RAH
Sbjct: 75 VPTPVGLRAH 84


>sp|CBID_METMA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VPVGQGIRAH 10
VP G+RAH
Sbjct: 73 VPTPVGLRAH 82




57|SequenceR|290|281|FILAVVPVGQ

>sp|PRIL_THEKO|DNA primase large subunit PriL|Thermococcus kodakarensis (strain ATCC

Query: 2 ILAVVPVGQ 10
+L VVPVG+
Sbjct: 109 MLPVVPVGE 117


>sp|AMPPA_NATPD|AMP phosphorylase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ILAVVPVGQ 10
++AV P GQ
Sbjct: 74 VVAVTPAGQ 82




58|SequenceR|295|286|NPGGEFILAV

>sp|RLME_HALLT|RIBOSOMAL RNA large subunit methyltransferase|Halorubrum lacusprofundi

Query: 2 PGGEFILAV 10
PGG+F++ V
Sbjct: 144 PGGDFVVKV 152


>sp|SYL_PYRAR|LEUCINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 NPGGEFILA 9
NP GE+++A
Sbjct: 239 NPEGEYVVA 247


>sp|RLME_ARCFU|RIBOSOMAL RNA large subunit methyltransferase|Archaeoglobus fulgidus (strain

Query: 2 PGGEFILAV 10
PGG F++ V
Sbjct: 138 PGGNFVVKV 146


>sp|ILVD_SACI2|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 NPGGEFILA 9
PGG++++A
Sbjct: 308 KPGGDYVMA 316


>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 2 PGGEFILA 9
PG EFI A
Sbjct: 697 PGREFIFA 704


>sp|NADA_METB6|QUINOLINATE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 NPGGEFILA 9
+PG EFI+
Sbjct: 225 SPGSEFIIG 233


>sp|ILVD_SULAC|DIHYDROXY-ACID dehydratase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NPGGEFILA 9
PGG++++A
Sbjct: 309 KPGGDYVMA 317


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 1 NPGGEFILA 9
+PGG FI+
Sbjct: 185 DPGGYFIIG 193


>sp|RPO2N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 1 NPGGEFIL 8
+PGG FI+
Sbjct: 154 DPGGYFII 161


>sp|RPO2N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 1 NPGGEFIL 8
+PGG FI+
Sbjct: 154 DPGGYFII 161


>sp|RNP1_AERPE|RIBONUCLEASE P protein component 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 PGGEFI 7
PGGE+I
Sbjct: 71 PGGEYI 76


>sp|RLME_METTP|RIBOSOMAL RNA large subunit methyltransferase|Methanothrix thermoacetophila

Query: 2 PGGEFILAV 10
PGG F++ V
Sbjct: 141 PGGSFLVKV 149


>sp|HVO19_HALVD|PROBABLE S-adenosylmethionine-dependent methyltransferase HVO_0019|Haloferax

Query: 2 PGGEFILAV 10
PGG F AV
Sbjct: 132 PGGTFYCAV 140


>sp|ATGT_METMA|TRNA-GUANINE(15) transglycosylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NPGGEF 6
NPG EF
Sbjct: 454 NPGAEF 459


>sp|ATGT_METAC|TRNA-GUANINE(15) transglycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NPGGEF 6
NPG EF
Sbjct: 454 NPGAEF 459


>sp|ILVD_SACI6|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 PGGEFILA 9
PGG++++A
Sbjct: 309 PGGDYVMA 316


>sp|ILVD_SACI4|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PGGEFILA 9
PGG++++A
Sbjct: 309 PGGDYVMA 316


>sp|ILVD_SACI3|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 PGGEFILA 9
PGG++++A
Sbjct: 309 PGGDYVMA 316


>sp|ILVD_SACS2|DIHYDROXY-ACID dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PGGEFILA 9
PGG++++A
Sbjct: 309 PGGDYVMA 316


>sp|ILVD_SACI7|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 PGGEFILA 9
PGG++++A
Sbjct: 309 PGGDYVMA 316


>sp|ILVD_SACI1|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 PGGEFILA 9
PGG++++A
Sbjct: 309 PGGDYVMA 316


>sp|ILVD_METS5|DIHYDROXY-ACID dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 2 PGGEFILA 9
PGG++++A
Sbjct: 309 PGGDYVMA 316


>sp|TRPC_THEAC|INDOLE-3-GLYCEROL phosphate synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NPGGEFILAV 10
N GG+ +LA+
Sbjct: 117 NAGGDAVLAI 126


>sp|RLME_METB6|RIBOSOMAL RNA large subunit methyltransferase|Methanoregula boonei (strain

Query: 2 PGGEFIL 8
PGG F++
Sbjct: 141 PGGNFVI 147


>sp|DCD_HALMA|DCTP deaminase|Haloarcula marismortui (strain ATCC 43049

Query: 3 GGEFIL 8
GGEFIL
Sbjct: 73 GGEFIL 78


>sp|HMGCS_METJA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GGEFILAV 10
GGE ILAV
Sbjct: 285 GGERILAV 292


>sp|AROA_ARCFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NPGGEFILAV 10
P GE +LA+
Sbjct: 116 RPNGELVLAL 125




59|SequenceR|300|291|VTLIVNPGGE

>sp|SYE_SACS2|GLUTAMATE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 TLIVNPG 8
T+IVNPG
Sbjct: 452 TIIVNPG 458


>sp|FWDA_METJA|PROTEIN FwdA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 IVNPGG 9
IVNPGG
Sbjct: 179 IVNPGG 184


>sp|NUCS_AERPE|ENDONUCLEASE NucS|Aeropyrum pernix (strain ATCC 700893

Query: 3 LIVNPGG 9
LIV PGG
Sbjct: 61 LIVKPGG 67


>sp|ATGT_THEVO|TRNA-GUANINE(15) transglycosylase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 TLIVNPGGE 10
TL+VN GE
Sbjct: 590 TLVVNENGE 598


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 VTLIVNP 7
+TLIVNP
Sbjct: 1384 LTLIVNP 1390


>sp|SYP_HALWD|PROLINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VTLIVNPGGE 10
VTLI P GE
Sbjct: 366 VTLIHRPDGE 375


>sp|ARGC_METAR|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 1 VTLIVNPG 8
TLI NPG
Sbjct: 137 ATLIANPG 144


>sp|DNAJ_METTE|CHAPERONE protein DnaJ|Methanosarcina thermophila

Query: 6 NPGGE 10
NPGGE
Sbjct: 356 NPGGE 360


>sp|ARGC_METST|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VTLIVNPG 8
TLI NPG
Sbjct: 139 ATLIANPG 146


>sp|PYRF_HALMA|OROTIDINE 5'-phosphate decarboxylase|Haloarcula marismortui (strain ATCC

Query: 6 NPGGE 10
NPGGE
Sbjct: 149 NPGGE 153


>sp|UPPS_ARCFU|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Archaeoglobus

Query: 1 VTLIVNPGGE 10
V LI+ GGE
Sbjct: 195 VDLIIRTGGE 204


>sp|LIVG_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 1 VTLIVNPGG 9
VTLI+ P G
Sbjct: 35 VTLIIGPNG 43


>sp|GGGPS_METMA|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LIVNPGG 9
LIV PGG
Sbjct: 130 LIVEPGG 136


>sp|Y764_THEAC|UPF0173 metal-dependent hydrolase Ta0764|Thermoplasma acidophilum (strain

Query: 2 TLIVNPGG 9
T+ +NPGG
Sbjct: 87 TIDINPGG 94


>sp|RS5_METTH|SMALL ribosomal subunit protein uS5|Methanothermobacter

Query: 1 VTLIVNPGG 9
VTLI PGG
Sbjct: 144 VTLIPAPGG 152




60|SequenceR|305|296|QLYELVTLIV

***** No hits found ******


61|SequenceR|310|301|VPPSEQLYEL

>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 PPSEQLYEL 10
PP E LYEL
Sbjct: 274 PPDELLYEL 282


>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VPPSEQLY 8
+PP+E+LY
Sbjct: 500 LPPTEKLY 507


>sp|HPS_METBF|3-HEXULOSE-6-PHOSPHATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VPPSEQLYEL 10
V P+E+ YEL
Sbjct: 368 VIPAERAYEL 377


>sp|DPHB_METS5|DIPHTHINE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VPPSEQLYEL 10
+ PS LYE+
Sbjct: 236 IVPSRNLYEM 245




62|SequenceR|315|306|CVVVPVPPSE

>sp|ILVE_METJA|PUTATIVE branched-chain-amino-acid aminotransferase|Methanocaldococcus

Query: 1 CVVVPVPP 8
C+ +P+PP
Sbjct: 112 CIAIPMPP 119


>sp|TRM1_METBU|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcoides burtonii

Query: 4 VPVPPSE 10
VP PPSE
Sbjct: 22 VPFPPSE 28


Query: 2 VVVPVPP 8
V VPVPP
Sbjct: 13 VSVPVPP 19


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 2 VVVPVPPSE 10
V +PVPPS+
Sbjct: 137 VGLPVPPSD 145


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 2 VVVPVPPS 9
V +PVPPS
Sbjct: 137 VNLPVPPS 144


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 2 VVVPVPPS 9
V +PVPPS
Sbjct: 137 VGLPVPPS 144


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 4 VPVPPS 9
+PVPPS
Sbjct: 139 LPVPPS 144


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 4 VPVPPS 9
+PVPPS
Sbjct: 139 LPVPPS 144


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 4 VPVPPS 9
+PVPPS
Sbjct: 139 LPVPPS 144


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 4 VPVPPS 9
+PVPPS
Sbjct: 139 LPVPPS 144


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 4 VPVPPS 9
+PVPPS
Sbjct: 139 LPVPPS 144


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 4 VPVPPS 9
+PVPPS
Sbjct: 139 LPVPPS 144


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 4 VPVPPS 9
+PVPPS
Sbjct: 139 LPVPPS 144


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 3 VVPVPP 8
V+PVPP
Sbjct: 214 VLPVPP 219


>sp|T1MH_METJA|TYPE I restriction enzyme MjaIX|Methanocaldococcus jannaschii (strain

Query: 4 VPVPPS 9
VPVPP+
Sbjct: 354 VPVPPN 359


>sp|LEU1_PYRAE|PROBABLE 2-isopropylmalate synthase|Pyrobaculum aerophilum (strain ATCC

Query: 4 VPVPPSE 10
VPVPP++
Sbjct: 272 VPVPPNK 278


>sp|SYP_PYRAB|PROLINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 VVVPVPPSE 10
V+VP+P E
Sbjct: 290 VIVPIPKKE 298


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 3 VVPVPP 8
V+PVPP
Sbjct: 283 VLPVPP 288


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 3 VVPVPP 8
V+PVPP
Sbjct: 283 VLPVPP 288


>sp|RS3A_IGNH4|SMALL ribosomal subunit protein eS1|Ignicoccus hospitalis (strain KIN4/I

Query: 2 VVVPVPPS 9
V+VP PP+
Sbjct: 205 VIVPKPPA 212


>sp|PUR1_METTH|AMIDOPHOSPHORIBOSYLTRANSFERASE thermautotrophicus (strain ATCC 29096

Query: 2 VVVPVPPS 9
VVVPVP S
Sbjct: 290 VVVPVPDS 297


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 3 VVPVPP 8
V+PVPP
Sbjct: 214 VLPVPP 219


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 4 VPVPPS 9
+PVPPS
Sbjct: 137 IPVPPS 142


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 3 VVPVPP 8
V+PVPP
Sbjct: 217 VLPVPP 222


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain ATCC

Query: 3 VVPVPP 8
V+PVPP
Sbjct: 213 VLPVPP 218


>sp|AROE_ARCFU|SHIKIMATE dehydrogenase (NADP(+))|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 VPVPPS 9
+PVPPS
Sbjct: 195 IPVPPS 200


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 VVVPVPPSE 10
V+VP+P E
Sbjct: 289 VIVPIPQKE 297


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 3 VVPVPP 8
V+PVPP
Sbjct: 207 VLPVPP 212


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 3 VVPVPP 8
V+PVPP
Sbjct: 207 VLPVPP 212


>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 3 VVPVPP 8
V+PVPP
Sbjct: 211 VLPVPP 216


>sp|NADA_PYRAB|QUINOLINATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 VVPVPPS 9
V+PVPP+
Sbjct: 161 VIPVPPN 167


>sp|TRM1_METBF|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina barkeri

Query: 2 VVVPVPPSE 10
V VPVPP +
Sbjct: 13 VSVPVPPPD 21


>sp|NADA_THEKO|QUINOLINATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 VVPVPPS 9
V+PVPP+
Sbjct: 164 VIPVPPN 170


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 4 VPVPPS 9
+PVPPS
Sbjct: 141 LPVPPS 146


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 3 VVPVPP 8
V+PVPP
Sbjct: 211 VLPVPP 216


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 3 VVPVPP 8
V+PVPP
Sbjct: 211 VLPVPP 216


>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 4 VPVPPSE 10
+PVPP E
Sbjct: 222 MPVPPKE 228


>sp|TRM1_METMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina mazei

Query: 2 VVVPVPPSE 10
+ VPVPP +
Sbjct: 13 ISVPVPPPD 21


>sp|RS2_PYRIL|SMALL ribosomal subunit protein uS2|Pyrobaculum islandicum (strain DSM

Query: 4 VPVPPSE 10
+PVPP E
Sbjct: 194 LPVPPEE 200




63|SequenceR|320|311|RGTGECVVVP

>sp|RS8_AERPE|SMALL ribosomal subunit protein uS8|Aeropyrum pernix (strain ATCC

Query: 1 RGTGECVVVP 10
RG GE +++P
Sbjct: 20 RGKGEAIIMP 29


>sp|YIH50_HALSA|UNCHARACTERIZED protein in transposable element|Halobacterium salinarum (strain

Query: 1 RGTGECVVVP 10
RGTGE V+P
Sbjct: 171 RGTGERHVIP 180


>sp|RS8_NITMS|SMALL ribosomal subunit protein uS8|Nitrosopumilus maritimus (strain

Query: 1 RGTGECVVVP 10
R GEC ++P
Sbjct: 20 RRKGECTILP 29


>sp|DMSR_HALVD|DIMETHYL sulfoxide reductase transcriptional activator|Haloferax volcanii

Query: 1 RGTGECVVV 9
R GEC+VV
Sbjct: 97 RADGECIVV 105


>sp|CBID_METHJ|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 1 RGTGEC 6
RGTGEC
Sbjct: 88 RGTGEC 93


>sp|HCP_METTH|HYDROXYLAMINE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GTGECVVVP 10
GT CV++P
Sbjct: 193 GTSNCVLLP 201


>sp|THII_METMA|PROBABLE tRNA sulfurtransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RGTGECVVVP 10
R G C VP
Sbjct: 359 RSAGSCTAVP 368


>sp|RLME_METLZ|RIBOSOMAL RNA large subunit methyltransferase|Methanocorpusculum labreanum

Query: 1 RGTGECVVV 9
RG+ EC +V
Sbjct: 179 RGSTECYIV 187


>sp|CHED_METBF|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina barkeri

Query: 2 GTGECVVV 9
G G CVV+
Sbjct: 19 GLGSCVVI 26


>sp|RS4E_META3|SMALL ribosomal subunit protein eS4|Methanococcus aeolicus (strain ATCC

Query: 3 TGECVVV 9
TG+CV++
Sbjct: 163 TGDCVIL 169


>sp|Y1228_ARCFU|UNCHARACTERIZED protein AF_1228|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GTGECVV 8
GTG C+V
Sbjct: 10 GTGSCLV 16


>sp|ENO_ARCFU|ENOLASE fulgidus (strain ATCC 49558

Query: 2 GTGECVVV 9
G+GE VVV
Sbjct: 42 GSGEAVVV 49




64|SequenceR|325|316|LLDAARGTGE

>sp|TRPF_META3|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LLDAARGTGE 10
LLD +GTG+
Sbjct: 133 LLDTGKGTGK 142


>sp|HIS4_METJA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanocaldococcus jannaschii

Query: 2 LDAARGTG 9
LDAA GTG
Sbjct: 52 LDAAFGTG 59


>sp|Y433_METTH|UPF0201 protein MTH_433|Methanothermobacter thermautotrophicus (strain

Query: 3 DAARGTGE 10
DA RGTG+
Sbjct: 37 DAVRGTGD 44


>sp|RS19_NATPD|SMALL ribosomal subunit protein uS19|Natronomonas pharaonis (strain

Query: 1 LLDAARGTGE 10
LLD AR GE
Sbjct: 54 LLDEAREAGE 63


>sp|HIS4_SACS2|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Saccharolobus solfataricus

Query: 2 LDAARGTG 9
LDAA G G
Sbjct: 52 LDAAEGVG 59


>sp|EF2_METPE|ELONGATION factor 2|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 LDAARGT 8
LDAA+GT
Sbjct: 193 LDAAKGT 199


>sp|Y1751_AERPE|UPF0201 protein APE_1751|Aeropyrum pernix (strain ATCC 700893

Query: 1 LLDAARG 7
+LDAARG
Sbjct: 71 ILDAARG 77


>sp|HIS4_METKA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanopyrus kandleri (strain

Query: 2 LDAARGTGE 10
+DAARG G+
Sbjct: 53 VDAARGEGD 61


>sp|EF2_METMJ|ELONGATION factor 2|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LDAARGT 8
LDAA+GT
Sbjct: 193 LDAAKGT 199


>sp|CBID_METHJ|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 5 ARGTGE 10
ARGTGE
Sbjct: 87 ARGTGE 92




65|SequenceR|330|321|KHIYALLDAA

>sp|YPV7_METTF|UNCHARACTERIZED protein ORF7|Methanothermobacter thermautotrophicus

Query: 1 KHIYALLD 8
KH+ ALLD
Sbjct: 94 KHVKALLD 101


>sp|SYT_CALMQ|THREONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 KHIYALLDAA 10
+ I+ALLD A
Sbjct: 473 RFIFALLDTA 482


>sp|YPZ7_METTF|UNCHARACTERIZED protein ORF7'|Methanothermobacter thermautotrophicus

Query: 1 KHIYALLD 8
KHI +LLD
Sbjct: 30 KHIKSLLD 37


>sp|GCH3_PYRAR|GTP cyclohydrolase III|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 KHIYALLD 8
K IYALLD
Sbjct: 172 KAIYALLD 179


>sp|DTDA_METPE|D-AMINOACYL-TRNA deacylase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 HIYALLD 8
H+YALL+
Sbjct: 239 HLYALLE 245


>sp|Y1493_METJA|UNCHARACTERIZED protein MJ1493|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KHIYALLDA 9
KH YAL++A
Sbjct: 66 KHAYALIEA 74


>sp|DPHB_METS5|DIPHTHINE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 KHIYALLDAA 10
K IY LLD+
Sbjct: 68 KEIYKLLDSG 77


>sp|T1R1_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 KHIYALLDAA 10
KHI L+D A
Sbjct: 407 KHILILIDEA 416




66|SequenceR|335|326|GEETQKHIYA

>sp|RPO1C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanocaldococcus jannaschii (strain

Query: 2 EETQKHIYA 10
EET KH+YA
Sbjct: 805 EETVKHLYA 813


>sp|RPO1C_METM6|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C6 /

Query: 2 EETQKHIYA 10
EET KH+Y+
Sbjct: 334 EETVKHLYS 342


>sp|RPO1C_METM5|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C5 /

Query: 2 EETQKHIYA 10
EET KH+Y+
Sbjct: 334 EETVKHLYS 342


>sp|RPO1C_META3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus aeolicus (strain ATCC

Query: 2 EETQKHIYA 10
EET KH+Y+
Sbjct: 336 EETVKHLYS 344


>sp|SYH_PYRAB|HISTIDINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 GEETQKHIYA 10
GEE K +YA
Sbjct: 54 GEEVVKQLYA 63


>sp|RPO1C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus vannielii (strain ATCC

Query: 2 EETQKHIYA 10
EET KH+Y+
Sbjct: 334 EETVKHLYS 342


>sp|RPO1C_METMP|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain DSM

Query: 2 EETQKHIYA 10
EET KH+Y+
Sbjct: 334 EETVKHLYS 342


>sp|RPO1C_METM7|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C7 /

Query: 2 EETQKHIYA 10
EET KH+Y+
Sbjct: 334 EETVKHLYS 342


>sp|PRIS_PYRAR|DNA primase small subunit PriS|Pyrobaculum arsenaticum (strain DSM

Query: 2 EETQKHIY 9
E+T KHIY
Sbjct: 54 EKTPKHIY 61


>sp|SYH_PYRHO|HISTIDINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GEETQKHIYA 10
GEE K +YA
Sbjct: 54 GEEVVKQLYA 63


>sp|SYH_THEKO|HISTIDINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GEETQKHIYA 10
GEE K +YA
Sbjct: 56 GEEVVKQLYA 65


>sp|RLME_METMJ|RIBOSOMAL RNA large subunit methyltransferase|Methanoculleus marisnigri

Query: 3 ETQKHIYA 10
ET+KH Y+
Sbjct: 162 ETRKHFYS 169


>sp|SYH_PYRFU|HISTIDINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GEETQKHIYA 10
GEE K +YA
Sbjct: 54 GEEVVKQLYA 63




67|SequenceR|340|331|DPLNGGEETQ

>sp|NADC_METTH|PROBABLE nicotinate-nucleotide pyrophosphorylase

Query: 1 DPLNGGE 7
DPL+GGE
Sbjct: 67 DPLSGGE 73


>sp|GPMI2_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina barkeri (strain Fusaro /

Query: 3 LNGGEETQ 10
LNGGEE +
Sbjct: 355 LNGGEEKR 362


>sp|GPMI1_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina acetivorans (strain ATCC

Query: 3 LNGGEETQ 10
LNGGEE +
Sbjct: 345 LNGGEEKR 352


>sp|AROB_SACS2|3-DEHYDROQUINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PLNGGEETQ 10
P+N GE T+
Sbjct: 58 PINDGESTK 66


>sp|RAD50_THEAC|DNA double-strand break repair Rad50|Thermoplasma acidophilum (strain

Query: 1 DPLNGGEET 9
D L+GGE+T
Sbjct: 801 DSLSGGEKT 809


>sp|MCRG_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DPLNGGEE 8
+PLNG +E
Sbjct: 74 EPLNGAKE 81




68|SequenceR|345|336|DPEAADPLNG

>sp|CAS1A_PYRAE|CRISPR-ASSOCIATED endonuclease Cas1 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DPEAADPLN 9
+PEAADPLN
Sbjct: 180 NPEAADPLN 188


>sp|SECY_PYRHO|PROTEIN translocase subunit SecY|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DPEAADPLNG 10
DP DPL G
Sbjct: 199 DPNIIDPLTG 208


>sp|SECY_PYRFU|PROTEIN translocase subunit SecY|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DPEAADPLNG 10
DP DPL G
Sbjct: 199 DPNIIDPLTG 208


>sp|SECY_PYRAB|PROTEIN translocase subunit SecY|Pyrococcus abyssi (strain GE5 /

Query: 1 DPEAADPLNG 10
DP DPL G
Sbjct: 199 DPNIIDPLTG 208


>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC

Query: 2 PEAADPLNG 10
P A DP NG
Sbjct: 87 PSAIDPFNG 95


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PEAADPLNG 10
P A DP NG
Sbjct: 87 PSAIDPFNG 95


>sp|PURL_SACI7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 PEAADPLNG 10
P A DP NG
Sbjct: 87 PSAIDPFNG 95


>sp|PURL_SACI2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 PEAADPLNG 10
P A DP NG
Sbjct: 87 PSAIDPFNG 95


>sp|PURL_SACI1|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 PEAADPLNG 10
P A DP NG
Sbjct: 87 PSAIDPFNG 95


>sp|PURL_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus solfataricus (strain ATCC

Query: 2 PEAADPLNG 10
P A DP NG
Sbjct: 87 PSAIDPFNG 95


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 2 PEAADPLNG 10
P A DP NG
Sbjct: 87 PSAIDPFNG 95


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 2 PEAADPLNG 10
P A DP NG
Sbjct: 87 PSAIDPFNG 95


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PEAADPLNG 10
P A DP NG
Sbjct: 87 PSAIDPFNG 95


>sp|MPGP_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 1 DPEAADPL 8
DPE A+P+
Sbjct: 18 DPEPAEPV 25


>sp|PURL_METS5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Metallosphaera sedula (strain ATCC 51363

Query: 2 PEAADPLNG 10
P A DP NG
Sbjct: 87 PSAIDPFNG 95


>sp|RPO1C_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus celer

Query: 4 AADPLNG 10
A DPLNG
Sbjct: 356 AVDPLNG 362


>sp|Y439_PYRHO|PROTEIN PH0439|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PEAADPLN 9
PE ++PLN
Sbjct: 132 PEGSEPLN 139


>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PEAADPLNG 10
P A DP NG
Sbjct: 83 PSAVDPYNG 91


>sp|PURL_PYRAR|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PEAADPLNG 10
P A DP NG
Sbjct: 83 PSAVDPYNG 91


>sp|PURL_PYRNV|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PEAADPLNG 10
P A DP NG
Sbjct: 83 PSAVDPYNG 91


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PEAADPLNG 10
P A DP NG
Sbjct: 83 PSAVDPYNG 91


>sp|PURL_PYRCJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PEAADPLNG 10
P A DP NG
Sbjct: 83 PSAVDPYNG 91


>sp|PURL_IGNH4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 PEAADPLNG 10
P A DP NG
Sbjct: 80 PSAVDPYNG 88


>sp|IF2P_METVS|PROBABLE translation initiation factor IF-2|Methanococcus vannielii (strain

Query: 4 AADPLNG 10
++DPLNG
Sbjct: 402 SSDPLNG 408


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PEAADPLNG 10
PE DP++G
Sbjct: 457 PELKDPVSG 465


>sp|DHE3_AERPE|GLUTAMATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DPEAADP 7
DPE DP
Sbjct: 248 DPEGIDP 254


>sp|F16PA_NATPD|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Natronomonas pharaonis (strain ATCC 35678

Query: 4 AADPLNG 10
AADPL+G
Sbjct: 84 AADPLDG 90


>sp|GLYA_HALWD|SERINE hydroxymethyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DPEAADPLN 9
DP+AAD L+
Sbjct: 10 DPDAADALS 18




69|SequenceR|350|341|ITSIIDPEAA

>sp|THIC_SULTO|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ITSIIDPEAA 10
I+S+IDPE A
Sbjct: 384 ISSLIDPERA 393


>sp|REG6_PYRHO|HTH-TYPE transcriptional regulator FL11|Pyrococcus horikoshii (strain ATCC

Query: 2 TSIIDPEA 9
T+IIDPEA
Sbjct: 55 TAIIDPEA 62


>sp|FTSZ1_THEKO|CELL division protein FtsZ 1|Thermococcus kodakarensis (strain ATCC

Query: 1 ITSIIDPEA 9
+TS +DPEA
Sbjct: 310 VTSKLDPEA 318


>sp|ECFA_METAC|ENERGY-COUPLING factor transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 ITSIIDPEAA 10
+TS++DP++
Sbjct: 163 VTSMLDPDSG 172


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 2 TSIIDPEAA 10
TS++DP A+
Sbjct: 152 TSVVDPSAS 160


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 SIIDPEA 9
SIIDP+A
Sbjct: 392 SIIDPQA 398


>sp|Y1037_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 ITSIIDPEAA 10
+TS++DP++
Sbjct: 163 VTSMLDPDSG 172


>sp|THIC_SULAC|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ITSIIDPEAA 10
I +IDPE A
Sbjct: 384 IEKLIDPEQA 393


>sp|TDXH_METMA|PEROXIREDOXIN mazei (strain ATCC BAA-159

Query: 4 IIDPEA 9
IIDPEA
Sbjct: 131 IIDPEA 136


>sp|Y206_METKA|UPF0280 protein MK0206|Methanopyrus kandleri (strain AV19 /

Query: 1 ITSIIDPEAA 10
+TS DPEAA
Sbjct: 179 LTSGDDPEAA 188


>sp|RPO1C_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrobaculum aerophilum (strain ATCC

Query: 1 ITSIIDPEAA 10
+TS+IDP A
Sbjct: 47 VTSLIDPGEA 56




70|SequenceR|355|346|NFTKKITSII

>sp|RAD50_METMP|DNA double-strand break repair Rad50|Methanococcus maripaludis

Query: 1 NFTKKITSII 10
NF+K ITSII
Sbjct: 20 NFSKGITSII 29




71|SequenceR|360|351|ENQGFNFTKK

>sp|Y245_SULTO|UPF0210 protein STK_02450|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ENQGFNFT 8
EN G NFT
Sbjct: 256 ENMGINFT 263


>sp|METXA_METST|HOMOSERINE O-acetyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ENQGFNFTKK 10
E+QG FTKK
Sbjct: 265 EHQGSTFTKK 274




72|SequenceR|365|356|FLHLAENQGF

>sp|HEM1_AERPE|GLUTAMYL-TRNA reductase|Aeropyrum pernix (strain ATCC 700893

Query: 1 FLHLAENQGF 10
F +AEN GF
Sbjct: 401 FARIAENSGF 410


>sp|CYAS_METB6|CYSTEATE synthase|Methanoregula boonei (strain DSM 21154

Query: 2 LHLAENQGF 10
LHLA+N+ F
Sbjct: 260 LHLAQNKPF 268


>sp|RFRNP_PYRHO|RNA-FREE ribonuclease P|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FLHLAEN 7
FLH AEN
Sbjct: 31 FLHYAEN 37


>sp|MER_METTI|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanolobus tindarius

Query: 1 FLHLAENQGF 10
+ LAE QGF
Sbjct: 19 YAKLAEQQGF 28


>sp|RL22_META3|LARGE ribosomal subunit protein uL22|Methanococcus aeolicus (strain ATCC

Query: 3 HLAENQGF 10
H++ N+GF
Sbjct: 115 HISSNKGF 122


>sp|CYAS_METPS|CYSTEATE synthase|Methanocella paludicola (strain DSM 17711

Query: 2 LHLAENQGF 10
LHLA+N F
Sbjct: 262 LHLAQNLPF 270


>sp|CYAS_METPE|CYSTEATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 LHLAENQGF 10
LHLA+N F
Sbjct: 261 LHLAQNLPF 269


>sp|CYAS_METAR|CYSTEATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 2 LHLAENQGF 10
LHLA+N F
Sbjct: 260 LHLAQNLPF 268


>sp|RL22_METVS|LARGE ribosomal subunit protein uL22|Methanococcus vannielii (strain ATCC

Query: 3 HLAENQGF 10
H++ N+GF
Sbjct: 115 HISSNKGF 122


>sp|RL22_METMP|LARGE ribosomal subunit protein uL22|Methanococcus maripaludis (strain

Query: 3 HLAENQGF 10
H++ N+GF
Sbjct: 115 HISSNRGF 122


>sp|RL22_METM7|LARGE ribosomal subunit protein uL22|Methanococcus maripaludis (strain C7

Query: 3 HLAENQGF 10
H++ N+GF
Sbjct: 115 HISSNRGF 122


>sp|RL22_METM6|LARGE ribosomal subunit protein uL22|Methanococcus maripaludis (strain C6

Query: 3 HLAENQGF 10
H++ N+GF
Sbjct: 115 HISSNRGF 122


>sp|RL22_METM5|LARGE ribosomal subunit protein uL22|Methanococcus maripaludis (strain C5

Query: 3 HLAENQGF 10
H++ N+GF
Sbjct: 115 HISSNRGF 122




73|SequenceR|370|361|EMLTQFLHLA

>sp|MFNA_PYRFU|PROBABLE L-aspartate decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EMLTQFLHL 9
EML+ LHL
Sbjct: 74 EMLSDLLHL 82


>sp|MFNA_PYRAB|PROBABLE L-aspartate decarboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 EMLTQFLHL 9
EML+ LHL
Sbjct: 75 EMLSDLLHL 83


>sp|AATA_METB6|A-TYPE ATP synthase subunit A|Methanoregula boonei (strain DSM 21154

Query: 1 EMLTQFLHL 9
E+LT+F HL
Sbjct: 273 EVLTEFPHL 281


>sp|ARLY_PYRAE|ARGININOSUCCINATE lyase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EMLTQFLHL 9
E+L +FLH+
Sbjct: 168 ELLAEFLHI 176




74|SequenceR|375|366|KRKMCEMLTQ

>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 RKMCEMLT 9
RK+CE LT
Sbjct: 112 RKLCEELT 119


>sp|GPN_PYRAB|GPN-LOOP GTPase PAB0955|Pyrococcus abyssi (strain GE5 /

Query: 3 KMCEMLTQ 10
KMC M+T+
Sbjct: 205 KMCSMMTE 212


>sp|Y365_METJA|UNCHARACTERIZED protein MJ0365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KRKMCEMLTQ 10
KRK+CE L +
Sbjct: 147 KRKICEHLKR 156


>sp|HDRA_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanococcus

Query: 2 RKMCEML 8
RK CEM+
Sbjct: 116 RKACEMI 122




75|SequenceR|380|371|VTILEKRKMC

>sp|FEN_NANEQ|FLAP endonuclease 1|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 VTILEKRKM 9
+TI EKRK+
Sbjct: 189 ITISEKRKL 197


>sp|PGK_HALVA|PHOSPHOGLYCERATE kinase|Haloarcula vallismortis (Halobacterium vallismortis)

Query: 1 VTILEKRKMC 10
V +LE +MC
Sbjct: 109 VLVLENTRMC 118


>sp|PGK_HALMA|PHOSPHOGLYCERATE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VTILEKRKMC 10
V +LE +MC
Sbjct: 108 VLVLENTRMC 117


>sp|COOS_METJA|CARBON monoxide dehydrogenase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 TILEKRK 8
TI+EKRK
Sbjct: 614 TIMEKRK 620




76|SequenceR|385|376|SGIHFVTILE

>sp|AKSA_METAC|HOMOCITRATE synthase AksA|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SGIHFVTILE 10
SGIH ILE
Sbjct: 304 SGIHVAAILE 313


>sp|AKSA_METMA|HOMOCITRATE synthase AksA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SGIHFVTILE 10
SGIH ILE
Sbjct: 304 SGIHVAAILE 313


>sp|AKSA_METKA|HOMOCITRATE synthase AksA|Methanopyrus kandleri (strain AV19 /

Query: 1 SGIHFVTILE 10
SGIH +LE
Sbjct: 300 SGIHVAAVLE 309


>sp|DAPAL_THEPD|UNCHARACTERIZED DapA-like lyase Tpen_1666|Thermofilum pendens (strain DSM 2475

Query: 3 IHFVTILE 10
+HF TILE
Sbjct: 120 VHFSTILE 127


>sp|UPPS_PICTO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Picrophilus

Query: 2 GIHFVTI 8
GIH VT+
Sbjct: 69 GIHMVTV 75




77|SequenceR|390|381|DQHEDSGIHF

>sp|RADA_CENSY|DNA repair and recombination protein|Cenarchaeum symbiosum (strain A)

Query: 4 EDSGIH 9
EDSG+H
Sbjct: 23 EDSGVH 28


>sp|DHQS_HALMA|3-DEHYDROQUINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 QHEDSGIHF 10
HED+ HF
Sbjct: 369 HHEDTATHF 377


>sp|PURP_METBU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcoides burtonii (strain DSM

Query: 4 EDSGIH 9
ED+GIH
Sbjct: 241 EDAGIH 246


>sp|DHE4_HALSI|NADP-SPECIFIC glutamate dehydrogenase A1|Halobacterium salinarum (Halobacterium

Query: 1 DQHEDSG 7
D HED+G
Sbjct: 384 DAHEDAG 390


>sp|DHE4_HALSA|NADP-SPECIFIC glutamate dehydrogenase A1|Halobacterium salinarum (strain ATCC

Query: 1 DQHEDSG 7
D HED+G
Sbjct: 384 DAHEDAG 390


>sp|FBPAP_IGNH4|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 DQHEDSGIHF 10
D ED G+H
Sbjct: 173 DVFEDKGVHL 182




78|SequenceR|395|386|IAVDIDQHED

>sp|COFC_METPE|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosphaerula palustris (strain ATCC

Query: 3 VDIDQHED 10
VDID+ ED
Sbjct: 165 VDIDEEED 172


>sp|RL10_METKA|LARGE ribosomal subunit protein uL10|Methanopyrus kandleri (strain AV19 /

Query: 1 IAVDIDQHED 10
+A+D D++ED
Sbjct: 217 LAIDFDEYED 226


>sp|ENDA_SACS2|TRNA-SPLICING endonuclease|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IAVDIDQ 7
IAVDID+
Sbjct: 133 IAVDIDE 139


>sp|ENDA_SACI4|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IAVDIDQ 7
IAVDID+
Sbjct: 133 IAVDIDE 139


>sp|ENDA_SACI6|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IAVDIDQ 7
IAVDID+
Sbjct: 133 IAVDIDE 139


>sp|ENDA_SACI3|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 IAVDIDQ 7
IAVDID+
Sbjct: 133 IAVDIDE 139


>sp|ILVD_HALMA|DIHYDROXY-ACID dehydratase|Haloarcula marismortui (strain ATCC 43049

Query: 1 IAVDIDQHE 9
I +DID HE
Sbjct: 516 ITIDIDDHE 524


>sp|ENDA_SACI1|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 IAVDIDQ 7
IAVDID+
Sbjct: 133 IAVDIDE 139


>sp|ENDA_SACI7|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 IAVDIDQ 7
IAVDID+
Sbjct: 133 IAVDIDE 139


>sp|ENDA_SACI2|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 IAVDIDQ 7
IAVDID+
Sbjct: 133 IAVDIDE 139


>sp|PDXT_METM6|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 1 IAVDIDQHED 10
I DI++HED
Sbjct: 9 IQGDIEEHED 18


>sp|DPHB_METB6|DIPHTHINE synthase|Methanoregula boonei (strain DSM 21154

Query: 4 DIDQHED 10
D++QH D
Sbjct: 61 DVEQHPD 67


>sp|SYC_SULAC|CYSTEINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IAVDIDQH 8
+ V+IDQH
Sbjct: 105 LKVEIDQH 112


>sp|PDXT_METMP|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 1 IAVDIDQHED 10
I DI++HED
Sbjct: 9 IQGDIEEHED 18




79|SequenceR|400|391|LLATLIAVDI

>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 1 LLATLIAVDI 10
LLA LIA++I
Sbjct: 328 LLAALIALEI 337




80|SequenceR|405|396|ANTGKLLATL

>sp|PYRB_METKA|ASPARTATE carbamoyltransferase catalytic subunit|Methanopyrus kandleri

Query: 3 TGKLLATL 10
+GK+LATL
Sbjct: 43 SGKILATL 50


>sp|PYRG_NATPD|CTP synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ANTGKLLA 8
A+TG+LLA
Sbjct: 34 ASTGRLLA 41


>sp|PYRB_THEON|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus onnurineus

Query: 4 GKLLATL 10
GK+LATL
Sbjct: 44 GKILATL 50


>sp|PYRB_THEKO|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus kodakarensis

Query: 4 GKLLATL 10
GK+LATL
Sbjct: 44 GKILATL 50


>sp|PYRB_PYRHO|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus horikoshii

Query: 4 GKLLATL 10
GK+LATL
Sbjct: 44 GKILATL 50


>sp|PYRB_PYRFU|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus furiosus

Query: 4 GKLLATL 10
GK+LATL
Sbjct: 44 GKILATL 50


>sp|PYRB_PYRAB|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus abyssi (strain

Query: 4 GKLLATL 10
GK+LATL
Sbjct: 44 GKILATL 50


>sp|PYRB_META3|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus aeolicus

Query: 4 GKLLATL 10
GK+LATL
Sbjct: 40 GKILATL 46


>sp|PYRB_THEGJ|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus gammatolerans

Query: 4 GKLLATL 10
GK+LATL
Sbjct: 44 GKILATL 50


>sp|PYRB_METVS|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus vannielii

Query: 4 GKLLATL 10
GK+LATL
Sbjct: 40 GKILATL 46




81|SequenceR|410|401|QDFASANTGK

>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QDFASANTGK 10
+DF S+NTG+
Sbjct: 419 RDFISSNTGE 428


>sp|RL22_METMJ|LARGE ribosomal subunit protein uL22|Methanoculleus marisnigri (strain

Query: 2 DFASANTGK 10
D A+ANTG+
Sbjct: 114 DHAAANTGR 122




82|SequenceR|415|406|LTLILQDFAS

***** No hits found ******


83|SequenceR|420|411|VRDWALTLIL

>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 VRDWALTL 8
VRDW+ TL
Sbjct: 53 VRDWSFTL 60


>sp|THSA_ARCFU|THERMOSOME subunit alpha|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VRDWALTL 8
+RDWA TL
Sbjct: 422 IRDWAPTL 429


>sp|AATE_METS5|A-TYPE ATP synthase subunit E|Metallosphaera sedula (strain ATCC 51363

Query: 1 VRDWALTLIL 10
VRD++L LIL
Sbjct: 164 VRDYSLNLIL 173


>sp|TRM56_NATPD|TRNA (cytidine(56)-2'-O)-methyltransferase|Natronomonas pharaonis

Query: 1 VRDWALTLI 9
VRDWA T++
Sbjct: 74 VRDWAGTVV 82


>sp|ARSC_HALSA|PUTATIVE arsenate reductase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VRDWAL 6
VRDWAL
Sbjct: 104 VRDWAL 109


>sp|FENR_SACS2|FERREDOXIN--NADP reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 DWALTL 8
DWALTL
Sbjct: 164 DWALTL 169


>sp|FENR_METS5|FERREDOXIN--NADP reductase|Metallosphaera sedula (strain ATCC 51363

Query: 3 DWALTL 8
DWALTL
Sbjct: 165 DWALTL 170


>sp|FENR_SULTO|FERREDOXIN--NADP reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 DWALTL 8
DWALTL
Sbjct: 165 DWALTL 170


>sp|FENR1_SULAC|FERREDOXIN--NADP reductase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 DWALTL 8
DWALTL
Sbjct: 160 DWALTL 165


>sp|G1PDH_IGNH4|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VRDWALTLIL 10
VRDW L +L
Sbjct: 179 VRDWRLAHVL 188


>sp|Y1626_PYRHO|MEMO1 family protein PH1626|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VRDWALTLI 9
VRDW + +I
Sbjct: 212 VRDWDMRII 220


>sp|IDH_CALNO|ISOCITRATE dehydrogenase [NADP]|Caldococcus noboribetus

Query: 2 RDWALTLIL 10
R WA LIL
Sbjct: 242 RQWAYDLIL 250


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VRDWALT 7
+RDWA T
Sbjct: 494 LRDWAFT 500


>sp|PIP_THEVO|PROLINE iminopeptidase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VRDWALT 7
+RDW +T
Sbjct: 222 IRDWDIT 228


>sp|Y758_ARCFU|UNCHARACTERIZED protein AF_0758|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RDWALTL 8
+DW LTL
Sbjct: 150 KDWFLTL 156


>sp|SYM_ARCFU|METHIONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VRDWALT 7
+RDW +T
Sbjct: 220 LRDWCIT 226


>sp|AROA_CALMQ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 2 RDWALTLIL 10
+ WA+ LIL
Sbjct: 20 KSWAIRLIL 28




84|SequenceR|425|416|NKAIDVRDWA

>sp|ARSC_HALSA|PUTATIVE arsenate reductase|Halobacterium salinarum (strain ATCC 700922

Query: 2 KAIDVRDWA 10
+ +DVRDWA
Sbjct: 100 ETVDVRDWA 108


>sp|CCA_THEKO|CCA-ADDING enzyme|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 DVRDW 9
DVRDW
Sbjct: 125 DVRDW 129


>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 5 DVRDW 9
D+RDW
Sbjct: 355 DIRDW 359


>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 5 DVRDW 9
D+RDW
Sbjct: 355 DIRDW 359


>sp|Y946_ARCFU|UNCHARACTERIZED protein AF_0946|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NKAIDVRDWA 10
NK +D+RD A
Sbjct: 794 NKTVDLRDIA 803


>sp|GGR_METJA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NKAIDVRDWA 10
+KAI + DW+
Sbjct: 307 SKAIKLNDWS 316


>sp|DAPA_NATPD|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 NKAIDVRD 8
N+A+D+RD
Sbjct: 257 NEAMDMRD 264


>sp|SEPS_METVS|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 NKAIDVR 7
NK IDVR
Sbjct: 519 NKVIDVR 525


>sp|SEPS_METMP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NKAIDVR 7
NK IDVR
Sbjct: 519 NKVIDVR 525


>sp|SEPS_METM7|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C7 /

Query: 1 NKAIDVR 7
NK IDVR
Sbjct: 519 NKVIDVR 525


>sp|SEPS_METM6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C6 /

Query: 1 NKAIDVR 7
NK IDVR
Sbjct: 519 NKVIDVR 525


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 5 DVRDW 9
D+RDW
Sbjct: 251 DIRDW 255


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 5 DVRDW 9
D+RDW
Sbjct: 251 DIRDW 255


>sp|SEPS_METJA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NKAIDVR 7
NK IDVR
Sbjct: 521 NKVIDVR 527


>sp|SAHH_PYRAB|ADENOSYLHOMOCYSTEINASE abyssi (strain GE5 /

Query: 1 NKAIDVR 7
NKA+D+R
Sbjct: 116 NKALDIR 122


>sp|RFCL_METBU|REPLICATION factor C large subunit|Methanococcoides burtonii (strain DSM 6242

Query: 4 IDVRDWA 10
+D+R+WA
Sbjct: 27 VDMREWA 33


>sp|PDAD_HALSA|PYRUVOYL-DEPENDENT arginine decarboxylase|Halobacterium salinarum (strain ATCC 700922

Query: 3 AIDVRDW 9
+DVRDW
Sbjct: 117 GMDVRDW 123


>sp|PDAD_HALS3|PYRUVOYL-DEPENDENT arginine decarboxylase|Halobacterium salinarum (strain ATCC 29341

Query: 3 AIDVRDW 9
+DVRDW
Sbjct: 117 GMDVRDW 123




85|SequenceR|430|421|YVFVHNKAID

>sp|ASOR_PYRFU|ALIPHATIC sulfonate oxidoreductase, WOR-like subunit|Pyrococcus furiosus

Query: 1 YVFVHNKAID 10
Y+F+HN ++
Sbjct: 122 YLFIHNDTVE 131


>sp|FAEHP_METBU|BIFUNCTIONAL enzyme Fae/Hps|Methanococcoides burtonii (strain DSM 6242

Query: 2 VFVHNKAID 10
VF+H +A+D
Sbjct: 113 VFIHPQAVD 121


>sp|Y1033_SACS2|KELCH domain-containing protein SSO1033|Saccharolobus solfataricus

Query: 1 YVFVHNKAI 9
Y+FV+N AI
Sbjct: 139 YIFVYNNAI 147


>sp|Y718_ARCFU|UNCHARACTERIZED protein AF_0718|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YVFVHNKAID 10
YV V NK +D
Sbjct: 5 YVLVDNKVVD 14


>sp|PCP_THEON|PYRROLIDONE-CARBOXYLATE peptidase|Thermococcus onnurineus (strain NA1)

Query: 3 FVHNKAID 10
F+H +A+D
Sbjct: 168 FIHEQALD 175


>sp|TRUA_THEVO|TRNA pseudouridine synthase A|Thermoplasma volcanium (strain ATCC

Query: 1 YVFVHNKA 8
YVFVH+ A
Sbjct: 82 YVFVHSFA 89




86|SequenceR|435|426|LWQQGYVFVH

>sp|Y2292_ARCFU|UNCHARACTERIZED protein AF_2292|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LWQQGYVF 8
LW++G+V+
Sbjct: 171 LWKEGFVY 178


>sp|Y084_ARCFU|UNCHARACTERIZED protein AF_0084|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LWQQGYV 7
LW +GYV
Sbjct: 141 LWSEGYV 147


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 LWQQGYVF 8
L+Q GY+F
Sbjct: 111 LYQNGYIF 118


>sp|FLUC2_HALMA|FLUORIDE-SPECIFIC ion channel FluC 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 LWQQGYV 7
LW+ GYV
Sbjct: 85 LWENGYV 91


>sp|RPO3_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermococcus kodakarensis (strain ATCC

Query: 2 WQQGYVF 8
WQ G+V+
Sbjct: 146 WQPGFVY 152


>sp|RPO3_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WQQGYVF 8
WQ G+V+
Sbjct: 148 WQPGFVY 154


>sp|DAPF_METTP|DIAMINOPIMELATE epimerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 WQQGYV 7
W+ GYV
Sbjct: 89 WESGYV 94


>sp|GPMA_METB6|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanoregula boonei (strain DSM 21154

Query: 1 LWQQGY 6
LW++GY
Sbjct: 112 LWRRGY 117


>sp|HIS4_SULTO|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Sulfurisphaera tokodaii (strain

Query: 1 LWQQGYVFVH 10
++++GY ++H
Sbjct: 39 IYEEGYDYLH 48




87|SequenceR|440|431|ELSGVLWQQG

>sp|RPO1C_META3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus aeolicus (strain ATCC

Query: 1 ELSGVLWQQG 10
E+SGVL QQG
Sbjct: 284 EISGVLNQQG 293


>sp|Y593_PYRCJ|UPF0201 protein Pcal_0593|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ELSGVLWQQG 10
+L G +W+QG
Sbjct: 54 KLRGAIWRQG 63


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 ELSGVLWQQG 10
+LSG W +G
Sbjct: 4144 QLSGAYWDKG 4153


>sp|Y1614_METAC|MACRO domain-containing protein MA_1614|Methanosarcina acetivorans

Query: 4 GVLWQQG 10
G +WQ+G
Sbjct: 103 GPIWQEG 109




88|SequenceR|445|436|DLMAQELSGV

>sp|DNAG_METST|DNA primase DnaG|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DLMAQELSG 9
+LM +ELSG
Sbjct: 358 ELMLKELSG 366


>sp|GGR_METBF|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina barkeri (strain Fusaro /

Query: 3 MAQELSG 9
MA+ELSG
Sbjct: 84 MAEELSG 90




89|SequenceR|450|441|DMVLADLMAQ

>sp|HISX_THEKO|HISTIDINOL dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DMVLADLMAQ 10
D VLADL++Q
Sbjct: 218 DYVLADLLSQ 227


>sp|DADD_METB6|5'-DEOXYADENOSINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 1 DMVLADLMAQ 10
DM+L D +AQ
Sbjct: 86 DMILQDWLAQ 95


>sp|RLME_THEAC|RIBOSOMAL RNA large subunit methyltransferase|Thermoplasma acidophilum

Query: 1 DMVLADLMAQ 10
D+VL+D MA+
Sbjct: 106 DVVLSDAMAK 115




90|SequenceR|455|446|VFAVRDMVLA

>sp|EF1A_THEVO|ELONGATION factor 1-alpha|Thermoplasma volcanium (strain ATCC 51530

Query: 2 FAVRDM 7
FAVRDM
Sbjct: 404 FAVRDM 409


>sp|EF1A_THEAC|ELONGATION factor 1-alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 FAVRDM 7
FAVRDM
Sbjct: 404 FAVRDM 409


>sp|EF1A_METMJ|ELONGATION factor 1-alpha|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 FAVRDM 7
FAVRDM
Sbjct: 402 FAVRDM 407


>sp|EF1A_METLZ|ELONGATION factor 1-alpha|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 FAVRDM 7
FAVRDM
Sbjct: 402 FAVRDM 407


>sp|EF1A_METB6|ELONGATION factor 1-alpha|Methanoregula boonei (strain DSM 21154

Query: 2 FAVRDM 7
FAVRDM
Sbjct: 402 FAVRDM 407


>sp|EF1A_HALWD|ELONGATION factor 1-alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 2 FAVRDM 7
FAVRDM
Sbjct: 401 FAVRDM 406


>sp|EF1A_HALSA|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 700922

Query: 2 FAVRDM 7
FAVRDM
Sbjct: 401 FAVRDM 406


>sp|EF1A_HALS3|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 29341

Query: 2 FAVRDM 7
FAVRDM
Sbjct: 401 FAVRDM 406




91|SequenceR|460|451|EILLKVFAVR

>sp|Y1189_METJA|UNCHARACTERIZED protein MJ1189|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ILLKVFAVR 10
ILLK+FA+
Sbjct: 225 ILLKIFAIS 233




92|SequenceR|465|456|MSVGNEILLK

>sp|Y2251_ARCFU|PROTEIN AF_2251|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MSVGNEIL 8
+SVGNEIL
Sbjct: 6 ISVGNEIL 13


>sp|Y875_PYRAE|PROTEIN PAE0875|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 MSVGNEILL 9
+SVGNE+L+
Sbjct: 8 LSVGNELLI 16


>sp|Y096_PYRAR|PROTEIN Pars_0096|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 MSVGNEILL 9
+SVGNE+L+
Sbjct: 9 ISVGNELLI 17


>sp|Y1980_AERPE|PROTEIN APE_1980.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 MSVGNEILL 9
+SVGNE+L+
Sbjct: 10 ISVGNELLI 18


>sp|Y487_THEAC|PROTEIN Ta0487|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MSVGNEIL 8
++VGNEIL
Sbjct: 7 ITVGNEIL 14


>sp|Y062_PYRCJ|PROTEIN Pcal_0062|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 MSVGNEILL 9
++VGNE+L+
Sbjct: 7 ITVGNELLI 15


>sp|RECJ1_METJA|EXONUCLEASE RecJ1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VGNEILLK 10
+GNE+L+K
Sbjct: 260 IGNELLIK 267


>sp|Y1209_CALMQ|PROTEIN Cmaq_1209|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 MSVGNEIL 8
+++GNEIL
Sbjct: 6 ITIGNEIL 13


>sp|Y1508_SULAC|PROTEIN Saci_1508|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 MSVGNEIL 8
+++GNEIL
Sbjct: 9 ITIGNEIL 16


>sp|ENO_META3|ENOLASE aeolicus (strain ATCC BAA-1280

Query: 1 MSVGNEILLK 10
M GN +LLK
Sbjct: 328 MGAGNALLLK 337


>sp|Y584_THEVO|PROTEIN TV0584|Thermoplasma volcanium (strain ATCC 51530

Query: 1 MSVGNEIL 8
++VGNE+L
Sbjct: 7 ITVGNEVL 14




93|SequenceR|470|461|TLFKHMSVGN

>sp|MFNB_METM7|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain C7 /

Query: 1 TLFKHMSV 8
TLF HMS+
Sbjct: 159 TLFDHMSI 166


>sp|MFNB_METM6|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain C6 /

Query: 1 TLFKHMSV 8
TLF HMS+
Sbjct: 159 TLFDHMSI 166


>sp|MFNB_METM5|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain C5 /

Query: 1 TLFKHMSV 8
TLF HMS+
Sbjct: 159 TLFDHMSI 166


>sp|MFNB_ARCFU|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TLFKHMSVGN 10
+LF HM +G+
Sbjct: 160 SLFDHMKIGD 169


>sp|Y1225_METJA|UNCHARACTERIZED protein MJ1225|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FKHMSVGN 10
F HM GN
Sbjct: 209 FNHMQTGN 216


>sp|MFNB_METVS|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 TLFKHMSV 8
TLF H+S+
Sbjct: 159 TLFDHLSI 166


>sp|Y887_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 TLFKHMS 7
TLFKH++
Sbjct: 89 TLFKHLN 95


>sp|Y4020_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 TLFKHMS 7
TLFKH++
Sbjct: 88 TLFKHLN 94


>sp|CHED1_METMA|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina mazei (strain

Query: 2 LFKHMSV 8
+FKHMS+
Sbjct: 156 VFKHMSL 162


>sp|CHED2_METAC|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina acetivorans

Query: 2 LFKHMSV 8
+FKHMS+
Sbjct: 156 VFKHMSL 162


>sp|PGK2_THEKO|2-PHOSPHOGLYCERATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 TLFKHMSVG 9
T KH+SVG
Sbjct: 167 TQVKHVSVG 175




94|SequenceR|475|466|ELRPITLFKH

>sp|VORB_METTM|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter marburgensis

Query: 2 LRPITLF 8
LRPITLF
Sbjct: 277 LRPITLF 283


>sp|VORB_METTH|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter thermautotrophicus

Query: 2 LRPITLF 8
LRPITLF
Sbjct: 277 LRPITLF 283


>sp|RTCA_METTH|RNA 3'-terminal phosphate cyclase|Methanothermobacter

Query: 1 ELRPITL 7
ELRPITL
Sbjct: 172 ELRPITL 178


>sp|RADB_ARCFU|DNA repair and recombination protein|Archaeoglobus fulgidus (strain

Query: 1 ELRPITLFKH 10
ELR TL KH
Sbjct: 192 ELRKATLIKH 201


>sp|CBID_METST|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ELRPITLFKH 10
++R ITLF H
Sbjct: 260 KIRSITLFGH 269


>sp|DPOL3_SACSH|DNA polymerase 3|Saccharolobus shibatae (strain ATCC 51178

Query: 1 ELRPITLFK 9
+LRP T FK
Sbjct: 125 DLRPFTWFK 133


>sp|IPYR_PYRHO|INORGANIC pyrophosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ELRPITLFK 9
E RPI LFK
Sbjct: 87 EARPIGLFK 95


>sp|IPYR_PYRAB|INORGANIC pyrophosphatase|Pyrococcus abyssi (strain GE5 /

Query: 1 ELRPITLFK 9
E RPI LFK
Sbjct: 87 EARPIGLFK 95


>sp|IPYR_THELN|INORGANIC pyrophosphatase|Thermococcus litoralis (strain ATCC 51850

Query: 1 ELRPITLFK 9
E RPI LFK
Sbjct: 87 EARPIGLFK 95


>sp|IPYR_PYRFU|INORGANIC pyrophosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ELRPITLFK 9
E RPI LFK
Sbjct: 87 EARPIGLFK 95


>sp|Y485_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LRPITLFKH 10
+RP+T FK+
Sbjct: 229 MRPLTRFKY 237




95|SequenceR|480|471|TNYLEELRPI

>sp|CBIM_METV3|PUTATIVE cobalt transport protein CbiM|Methanococcus voltae (strain ATCC

Query: 2 NYLEELRP 9
+YL ELRP
Sbjct: 199 DYLSELRP 206


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 NYLEELRPI 10
NYLE ++PI
Sbjct: 642 NYLEMIKPI 650


>sp|Y1305_METJA|PUTATIVE protein adenylyltransferase MJ1305|Methanocaldococcus jannaschii

Query: 2 NYLEELRPI 10
NYLE ++PI
Sbjct: 118 NYLERIKPI 126


>sp|DHQS_METKA|3-DEHYDROQUINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 TNYLEELRP 9
T YL ELRP
Sbjct: 298 TKYLAELRP 306


>sp|MRE11_THEVO|DNA double-strand break repair protein|Thermoplasma volcanium (strain

Query: 2 NYLEELRPI 10
NYLEE++ I
Sbjct: 262 NYLEEIKSI 270


>sp|PYRE_PYRAE|OROTATE phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 LEELRP 9
LEELRP
Sbjct: 169 LEELRP 174


>sp|GSA_METPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 NYLEELRPI 10
NYL E+R I
Sbjct: 215 NYLREVRSI 223


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 1 TNYLEELRP 9
NY EE++P
Sbjct: 324 VNYAEEMKP 332


>sp|SYN_THEVO|ASPARAGINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 TNYLEELRPI 10
TNY +EL+P
Sbjct: 318 TNYPKELKPF 327


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 YLEELRPI 10
Y+EEL+P+
Sbjct: 384 YVEELKPL 391


>sp|IDI2_META3|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 NYLEELR 8
NY+EEL+
Sbjct: 321 NYIEELK 327


>sp|DGGGP_METTH|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 3 YLEELRPI 10
Y+E LRP+
Sbjct: 4 YIEILRPV 11


>sp|AROC_METS5|CHORISMATE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 3 YLEELRP 9
Y+EE RP
Sbjct: 378 YMEECRP 384


>sp|HISX_ARCFU|HISTIDINOL dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NYLEELRPI 10
+Y+E+++PI
Sbjct: 15 DYIEKVKPI 23


>sp|GSA_METMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 YLEELRPI 10
YLEELR +
Sbjct: 222 YLEELRKL 229


>sp|GSA_METBF|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina barkeri (strain Fusaro /

Query: 3 YLEELRPI 10
YLEELR +
Sbjct: 222 YLEELRKL 229


>sp|HEM1_METMP|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain DSM 14266

Query: 2 NYLEELR 8
NY+EE+R
Sbjct: 319 NYIEEIR 325


>sp|DHQS_METAC|3-DEHYDROQUINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TNYLEELR 8
T YL ELR
Sbjct: 279 TRYLSELR 286


>sp|HEM1_METM5|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C5 /

Query: 2 NYLEELR 8
NY+EE+R
Sbjct: 319 NYIEEIR 325


>sp|DHQS_METBF|3-DEHYDROQUINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 TNYLEELR 8
T YL ELR
Sbjct: 279 TRYLSELR 286


>sp|Y1674_METJA|CRISPR-ASSOCIATED protein MJ1674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TNYLEELR 8
NYL+ELR
Sbjct: 263 ANYLKELR 270


>sp|PCP_THELN|PYRROLIDONE-CARBOXYLATE peptidase|Thermococcus litoralis (strain ATCC 51850

Query: 3 YLEELRP 9
YLEE++P
Sbjct: 56 YLEEIKP 62


>sp|RRP41_SULAC|EXOSOME complex component Rrp41|Sulfolobus acidocaldarius (strain ATCC

Query: 4 LEELRPI 10
L+ELRPI
Sbjct: 22 LDELRPI 28


>sp|AATA_METAR|A-TYPE ATP synthase subunit A|Methanocella arvoryzae (strain DSM 22066

Query: 3 YLEELRP 9
Y+E+LRP
Sbjct: 196 YVEKLRP 202


>sp|MVP5K_THEAC|MEVALONATE-3-PHOSPHATE 5-kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 YLEELRPI 10
YL++ RPI
Sbjct: 75 YLDQARPI 82


>sp|SYN_THEAC|ASPARAGINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TNYLEELRPI 10
TNY ++L+P
Sbjct: 318 TNYPKDLKPF 327


>sp|Y2122_SACI6|UPF0282 protein M164_2122|Saccharolobus islandicus (strain M.16.4 /

Query: 2 NYLEELRPI 10
NY E L+P+
Sbjct: 245 NYAEVLKPV 253


>sp|SYFB_METJA|PHENYLALANINE--TRNA ligase beta subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 NYLEELRP 9
NY+E L+P
Sbjct: 404 NYIEVLKP 411


>sp|Y2198_SACI3|UPF0282 protein M1627_2198|Saccharolobus islandicus (strain M.16.27)

Query: 2 NYLEELRPI 10
NY E L+P+
Sbjct: 245 NYAEVLKPV 253


>sp|Y2116_SACI4|UPF0282 protein M1425_2116|Saccharolobus islandicus (strain M.14.25 /

Query: 2 NYLEELRPI 10
NY E L+P+
Sbjct: 245 NYAEVLKPV 253


>sp|THYX_THEON|FLAVIN-DEPENDENT thymidylate synthase|Thermococcus onnurineus (strain NA1)

Query: 5 EELRPI 10
EELRPI
Sbjct: 200 EELRPI 205


>sp|THYX_PYRAB|FLAVIN-DEPENDENT thymidylate synthase|Pyrococcus abyssi (strain GE5 /

Query: 5 EELRPI 10
EELRPI
Sbjct: 197 EELRPI 202


>sp|Y671_SACI1|UPF0282 protein YN1551_0671|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 NYLEELRPI 10
NY E L+P+
Sbjct: 245 NYAEVLKPV 253


>sp|Y2281_SACI2|UPF0282 protein LS215_2281|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 NYLEELRPI 10
NY E L+P+
Sbjct: 245 NYAEVLKPV 253


>sp|Y2245_SACI7|UPF0282 protein YG5714_2245|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 NYLEELRPI 10
NY E L+P+
Sbjct: 245 NYAEVLKPV 253


>sp|NARH_HALMT|RESPIRATORY nitrate reductase subunit beta|Haloferax mediterranei (strain ATCC

Query: 2 NYLEEL 7
NYLEEL
Sbjct: 299 NYLEEL 304




96|SequenceR|485|476|TPGQKTNYLE

>sp|DHQS_METJA|3-DEHYDROQUINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PGQKTNYL 9
PG KT YL
Sbjct: 256 PGNKTKYL 263


>sp|DHQS_METS3|3-DEHYDROQUINATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 PGQKTNYL 9
PG KT YL
Sbjct: 263 PGNKTRYL 270


>sp|SECD_METP4|PROTEIN-EXPORT membrane protein SecD|Methanolacinia petrolearia (strain DSM 11571

Query: 1 TPGQKTNY 8
TP Q+ NY
Sbjct: 213 TPSQRNNY 220


>sp|SFSA_SULAC|SUGAR fermentation stimulation protein homolog|Sulfolobus

Query: 3 GQKTNYL 9
G+KTNY+
Sbjct: 62 GRKTNYM 68


>sp|AMPPA_THEKO|AMP phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PGQKTNYL 9
PG KTN L
Sbjct: 170 PGNKTNIL 177


>sp|VORB_PYRAB|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus abyssi (strain GE5 /

Query: 1 TPGQKTNYLE 10
TPG K ++LE
Sbjct: 162 TPGGKRHFLE 171


>sp|DHQS_METKA|3-DEHYDROQUINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 PGQKTNYL 9
PG KT YL
Sbjct: 294 PGGKTKYL 301


>sp|AMPPA_THEGJ|AMP phosphorylase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 PGQKTNYL 9
PG KTN L
Sbjct: 170 PGNKTNIL 177


>sp|AMPPA_THEON|AMP phosphorylase|Thermococcus onnurineus (strain NA1)

Query: 2 PGQKTNYL 9
PG KTN L
Sbjct: 170 PGNKTNIL 177


>sp|AMPPA_THESM|AMP phosphorylase|Thermococcus sibiricus (strain DSM 12597

Query: 2 PGQKTNYL 9
PG KTN L
Sbjct: 170 PGNKTNIL 177


>sp|AMPPA_PYRHO|AMP phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PGQKTNYL 9
PG KTN L
Sbjct: 170 PGNKTNIL 177


>sp|PSA_SULAC|PROTEASOME subunit alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PGQKTNY 8
PG+K NY
Sbjct: 206 PGEKLNY 212


>sp|SYFB_METJA|PHENYLALANINE--TRNA ligase beta subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 TPGQKTNYL 9
TPG NYL
Sbjct: 296 TPGTIINYL 304


>sp|Y1067_METMP|UNCHARACTERIZED iron-sulfur protein MMP1067|Methanococcus maripaludis (strain DSM

Query: 2 PGQKTNYLE 10
P +KT++LE
Sbjct: 242 PKEKTSFLE 250


>sp|AMPPA_PYRFU|AMP phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PGQKTNYL 9
PG KTN +
Sbjct: 170 PGNKTNVI 177


>sp|AMPPA_PYRAB|AMP phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 2 PGQKTNYL 9
PG KTN +
Sbjct: 170 PGNKTNII 177


>sp|Y946_ARCFU|UNCHARACTERIZED protein AF_0946|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GQKTNYLE 10
G KT+YL+
Sbjct: 123 GNKTDYLQ 130




97|SequenceR|490|481|FLMPNTPGQK

>sp|HEM3_CALMQ|PROBABLE porphobilinogen deaminase|Caldivirga maquilingensis (strain ATCC

Query: 2 LMPNTPGQ 9
LMP PGQ
Sbjct: 187 LMPPAPGQ 194


>sp|IF2P_CALMQ|PROBABLE translation initiation factor IF-2|Caldivirga maquilingensis

Query: 1 FLMPNTPGQ 9
FLM +TPG
Sbjct: 76 FLMVDTPGH 84


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 2 LMPNTPG 8
MPNTP
Sbjct: 253 FMPNTPA 259


>sp|Y1472_METJA|UNCHARACTERIZED protein MJ1472|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FLMPNTPGQK 10
+L PN PG K
Sbjct: 529 WLYPNMPGYK 538


>sp|DHQS_METKA|3-DEHYDROQUINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 LMPNTPG 8
LMP +PG
Sbjct: 56 LMPESPG 62


>sp|PYRD_NATPD|DIHYDROOROTATE dehydrogenase (quinone)|Natronomonas pharaonis (strain ATCC 35678

Query: 4 PNTPG 8
PNTPG
Sbjct: 181 PNTPG 185


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 2 LMPNTPGQK 10
L+ NTPG K
Sbjct: 993 LLINTPGDK 1001


>sp|MTM7_METJA|PUTATIVE type II methyltransferase M.MjaORF1200P|Methanocaldococcus

Query: 1 FLMPNTPGQK 10
F+M N PG K
Sbjct: 175 FVMENVPGIK 184


>sp|HEM4_METJA|PUTATIVE uroporphyrinogen-III synthase|Methanocaldococcus jannaschii (strain

Query: 1 FLMPNTPGQK 10
FL+P TP +
Sbjct: 123 FLIPTTPSTR 132


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LMPNTPGQK 10
L PNTP K
Sbjct: 773 LPPNTPNDK 781


>sp|TRPB_THEAC|TRYPTOPHAN synthase beta chain|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 MPNTPG 8
MP+TPG
Sbjct: 195 MPDTPG 200


>sp|TRPF_METAR|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanocella arvoryzae (strain DSM 22066

Query: 2 LMPNTPGQ 9
+ P+TPG+
Sbjct: 61 MQPSTPGE 68


>sp|AROA_METB6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanoregula boonei (strain DSM 21154

Query: 4 PNTPG 8
PNTPG
Sbjct: 80 PNTPG 84


>sp|TRPB2_SULTO|TRYPTOPHAN synthase beta chain 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PNTPG 8
PNTPG
Sbjct: 199 PNTPG 203


>sp|RNJL_SACS2|RNASE aCSPSF2|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 NTPGQK 10
NTPG+K
Sbjct: 406 NTPGRK 411


>sp|HMDX_METJA|H(2)-FORMING methylenetetrahydromethanopterin dehydrogenase-related protein

Query: 3 MPNTPGQK 10
+P TP QK
Sbjct: 148 VPGTPSQK 155


>sp|PYRD_HALSA|DIHYDROOROTATE dehydrogenase (quinone)|Halobacterium salinarum (strain ATCC 700922

Query: 4 PNTPG 8
PNTPG
Sbjct: 180 PNTPG 184


>sp|PYRD_HALS3|DIHYDROOROTATE dehydrogenase (quinone)|Halobacterium salinarum (strain ATCC 29341

Query: 4 PNTPG 8
PNTPG
Sbjct: 180 PNTPG 184




98|SequenceR|495|486|DRVLHFLMPN

>sp|ABLA_METMP|L-LYSINE 2,3-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DRVLHFLMPN 10
DRVL ++ PN
Sbjct: 126 DRVLFYINPN 135


>sp|NADE_METTH|NH(3)-DEPENDENT NAD(+) synthetase|Methanothermobacter thermautotrophicus (strain

Query: 1 DRVLHFLMPN 10
DRVL +MP+
Sbjct: 55 DRVLGLIMPS 64


>sp|FLAK_METM6|PREFLAGELLIN peptidase|Methanococcus maripaludis (strain C6 /

Query: 1 DRVLHFLMP 9
DR+L FL+P
Sbjct: 221 DRILDFLIP 229


>sp|HERA_SACS2|DNA double-strand break repair helicase|Saccharolobus solfataricus

Query: 5 HFLMPN 10
HFLMP+
Sbjct: 89 HFLMPD 94


>sp|Y142_AERPE|UNCHARACTERIZED HTH-type transcriptional regulator APE_0142|Aeropyrum pernix

Query: 2 RVLHFLM 8
R+LH+LM
Sbjct: 20 RILHYLM 26


>sp|GLYA_PYRHO|SERINE hydroxymethyltransferase|Pyrococcus horikoshii (strain ATCC

Query: 1 DRVLHFL 7
D+VLHF+
Sbjct: 8 DKVLHFI 14


>sp|GLYA_PYRAB|SERINE hydroxymethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 DRVLHFL 7
D+VLHF+
Sbjct: 8 DKVLHFI 14


>sp|RL10E_METJA|LARGE ribosomal subunit protein uL16|Methanocaldococcus jannaschii

Query: 2 RVLHFLMPN 10
+V+HF+M N
Sbjct: 31 KVVHFIMGN 39


>sp|LMRAC_THEKO|LEUCINE/METHIONINE racemase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DRVLHF 6
DR+LHF
Sbjct: 71 DRLLHF 76


>sp|ARLY_ARCFU|ARGININOSUCCINATE lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 HFLMP 9
HFLMP
Sbjct: 140 HFLMP 144


>sp|VHTC_METMA|F420 non-reducing hydrogenase II cytochrome|Methanosarcina mazei (strain

Query: 2 RVLHFLM 8
RVLH LM
Sbjct: 194 RVLHLLM 200




99|SequenceR|500|491|NGQKVDRVLH

>sp|UVRC_HALWD|UVRABC system protein C|Haloquadratum walsbyi (strain DSM 16790

Query: 1 NGQKVDRVLH 10
NGQ VDR H
Sbjct: 279 NGQLVDRSQH 288


>sp|RTCA_KORCO|RNA 3'-terminal phosphate cyclase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GQKVDRVL 9
G+K DRVL
Sbjct: 183 GEKFDRVL 190


>sp|NADA_METKA|QUINOLINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 GQKVDRVL 9
G+KV+RVL
Sbjct: 252 GEKVERVL 259


>sp|IPYR_SACS2|INORGANIC pyrophosphatase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 KVDRVLH 10
KVDRVL+
Sbjct: 37 KVDRVLY 43


>sp|ENO_METAR|ENOLASE arvoryzae (strain DSM 22066

Query: 3 QKVDRVLH 10
+++DR+LH
Sbjct: 76 EEIDRLLH 83


>sp|AROA_NITMS|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 NGQKVDRVL 9
NG KV+ VL
Sbjct: 35 NGSKVENVL 43


>sp|IPYR_SULAC|INORGANIC pyrophosphatase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 KVDRVLH 10
KVDRVL+
Sbjct: 37 KVDRVLY 43


>sp|PHAE_HALHT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaE|Haloarcula hispanica (strain ATCC 33960

Query: 3 QKVDRVL 9
QK+DRVL
Sbjct: 170 QKLDRVL 176


>sp|PHAE_HALMA|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaE|Haloarcula marismortui (strain ATCC 43049

Query: 3 QKVDRVL 9
QK+DRVL
Sbjct: 170 QKLDRVL 176


>sp|IPYR_HALVD|INORGANIC pyrophosphatase|Haloferax volcanii (strain ATCC 29605

Query: 2 GQKVDRVLH 10
G +DRVLH
Sbjct: 40 GVVLDRVLH 48


>sp|IPYR_HALSA|INORGANIC pyrophosphatase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GQKVDRVLH 10
G +DRVLH
Sbjct: 40 GVVLDRVLH 48




100|SequenceR|505|496|YGPPLNGQKV

>sp|SPSS1_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanococcoides burtonii (strain DSM 6242

Query: 4 PLNGQKV 10
P+NGQK+
Sbjct: 266 PVNGQKI 272


>sp|Y611_METJA|PUTATIVE zinc metalloprotease MJ0611|Methanocaldococcus jannaschii (strain

Query: 3 PPLNGQKV 10
PP +G+KV
Sbjct: 159 PPFDGEKV 166


>sp|ENDA_METBU|TRNA-SPLICING endonuclease|Methanococcoides burtonii (strain DSM 6242

Query: 1 YGPPLNGQKV 10
YG PL+ Q++
Sbjct: 206 YGKPLDSQRL 215


>sp|PNCB_METBU|NICOTINATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 1 YGPPLN 6
Y PPLN
Sbjct: 354 YNPPLN 359


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 PPLNGQ 8
PPLNG+
Sbjct: 1318 PPLNGK 1323


>sp|SYP_HALMA|PROLINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PPLNGQK 9
PPL G+K
Sbjct: 197 PPLKGRK 203


>sp|Y1105_THEAC|UNCHARACTERIZED protein Ta1105|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GPPLNGQKV 10
GP LNG+ V
Sbjct: 49 GPELNGELV 57


>sp|IDH_ARCFU|ISOCITRATE dehydrogenase [NADP]|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PPLNGQKV 10
PP NG+K+
Sbjct: 8 PPENGEKI 15


>sp|ENDA_HALSA|TRNA-SPLICING endonuclease|Halobacterium salinarum (strain ATCC 700922

Query: 1 YGPPLNGQ 8
YG PL G+
Sbjct: 195 YGQPLGGR 202


>sp|ENDA_HALS3|TRNA-SPLICING endonuclease|Halobacterium salinarum (strain ATCC 29341

Query: 1 YGPPLNGQ 8
YG PL G+
Sbjct: 195 YGQPLGGR 202


>sp|SYD_THEKO|ASPARTATE--TRNA(ASP) ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 LNGQKV 10
LNGQKV
Sbjct: 14 LNGQKV 19




101|SequenceR|510|501|ILTIKYGPPL

>sp|RADB_METJA|DNA repair and recombination protein|Methanocaldococcus jannaschii

Query: 1 ILTIKYGPP 9
I+T YGPP
Sbjct: 14 IITQIYGPP 22


>sp|IF6_HALLT|TRANSLATION initiation factor 6|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 TIKYGPPL 10
TI YG PL
Sbjct: 180 TINYGAPL 187


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILTIKYGP 8
I+T+ YGP
Sbjct: 682 IITLSYGP 689


>sp|IF6_NATPD|TRANSLATION initiation factor 6|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ILTIKYGPPL 10
I TI YG PL
Sbjct: 178 IGTINYGGPL 187


>sp|KAE1_CALMQ|TRNA N6-adenosine threonylcarbamoyltransferase|Caldivirga maquilingensis

Query: 2 LTIKYGPPL 10
+ IKYG PL
Sbjct: 95 IAIKYGKPL 103


>sp|CCA_METTH|CCA-ADDING enzyme|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 KYGPPL 10
+YGPP+
Sbjct: 355 RYGPPV 360


>sp|RISB_AERPE|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LTIKYGPPL 10
L+I+YG P+
Sbjct: 96 LSIEYGKPV 104


>sp|RL35A_AERPE|LARGE ribosomal subunit protein eL33|Aeropyrum pernix (strain ATCC

Query: 1 ILTIKYGPPL 10
++ +K+ PPL
Sbjct: 67 VVVVKFNPPL 76


>sp|KAE1_AERPE|TRNA N6-adenosine threonylcarbamoyltransferase|Aeropyrum pernix (strain

Query: 2 LTIKYGPPL 10
L+ KYG PL
Sbjct: 104 LSAKYGKPL 112


>sp|MTRE_METFE|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanothermus fervidus

Query: 2 LTIKYGPPL 10
T+KYG P+
Sbjct: 229 FTVKYGSPI 237


>sp|HIS7_CENSY|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Cenarchaeum symbiosum (strain A)

Query: 2 LTIKYG 7
LT+KYG
Sbjct: 150 LTVKYG 155


>sp|TBP_PYROC|TATA-BOX-BINDING protein|Pyrodictium occultum

Query: 1 ILTIKYGP 8
ILT++Y P
Sbjct: 45 ILTVEYNP 52




102|SequenceR|515|506|VLGIDILTIK

>sp|PSB1_SULTO|PROTEASOME subunit beta 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GIDILTIK 10
GIDILTIK
Sbjct: 177 GIDILTIK 184


>sp|PRIS_METHJ|DNA primase small subunit PriS|Methanospirillum hungatei JF-1 (strain

Query: 2 LGIDILTIK 10
LGID+ TIK
Sbjct: 133 LGIDMRTIK 141


>sp|RS3_AERPE|SMALL ribosomal subunit protein uS3|Aeropyrum pernix (strain ATCC 700893

Query: 1 VLGIDILTIK 10
V+G+D++ +K
Sbjct: 177 VIGVDVIIVK 186


>sp|PDXS_PYRAE|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum aerophilum (strain

Query: 1 VLGIDILTIK 10
++GIDI T+K
Sbjct: 317 MMGIDIRTLK 326


>sp|RLME_METM7|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 1 VLGIDILTIK 10
++GID+ T+K
Sbjct: 74 IVGIDLQTVK 83


>sp|RLME_METM5|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 1 VLGIDILTIK 10
++GID+ T+K
Sbjct: 74 IVGIDLQTVK 83


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 1 VLGIDILTIK 10
VLG DI TIK
Sbjct: 113 VLGSDIQTIK 122


>sp|RLME_METM6|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 1 VLGIDILTIK 10
++GID+ T+K
Sbjct: 74 IVGIDLQTVK 83


>sp|PDXS_PYRAR|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum arsenaticum (strain

Query: 1 VLGIDILTIK 10
++GIDI T+K
Sbjct: 318 MVGIDIKTLK 327


>sp|PSB2_METS5|PROTEASOME subunit beta 2|Metallosphaera sedula (strain ATCC 51363

Query: 3 GIDILTIK 10
GIDILTI
Sbjct: 177 GIDILTIS 184


>sp|RLME_METMP|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus maripaludis

Query: 1 VLGIDILTIK 10
++GID+ T+K
Sbjct: 74 IVGIDLQTVK 83


>sp|PDXS_METS5|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Metallosphaera sedula (strain

Query: 1 VLGIDILTIK 10
++GIDI T+K
Sbjct: 318 MMGIDIKTLK 327


>sp|COFF_METJA|COENZYME gamma-F420-2:alpha-L-glutamate ligase|Methanocaldococcus jannaschii

Query: 1 VLGIDILTIK 10
+LG+DIL K
Sbjct: 241 ILGVDILPTK 250


>sp|PDXS_SULAC|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Sulfolobus acidocaldarius

Query: 1 VLGIDILTIK 10
++GIDI T+K
Sbjct: 317 MMGIDIKTLK 326


>sp|PCNA_METPE|DNA polymerase sliding clamp|Methanosphaerula palustris (strain ATCC

Query: 2 LGIDILTIK 10
+GIDI+ IK
Sbjct: 66 MGIDIVKIK 74




103|SequenceR|520|511|MLYEIVLGID

>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 2 LYEIVLGID 10
+E+VLG+D
Sbjct: 646 FFEVVLGMD 654


>sp|SYP_HALSA|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 LYEIVLGI 9
LYE VLGI
Sbjct: 190 LYEDVLGI 197


>sp|SYP_HALS3|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 LYEIVLGI 9
LYE VLGI
Sbjct: 190 LYEDVLGI 197


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 2 LYEIVLG 8
+YEIVLG
Sbjct: 537 VYEIVLG 543




104|SequenceR|525|516|RYTGGMLYEI

>sp|PSLS_METTH|PHOSPHOSULFOLACTATE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 YTGGMLYEI 10
Y GG L+EI
Sbjct: 77 YPGGTLFEI 85


>sp|CDC61_THEAC|PUTATIVE ORC1-type DNA replication protein|Thermoplasma acidophilum (strain

Query: 1 RYTGGMLYEI 10
RYT G +Y+I
Sbjct: 166 RYTKGEIYQI 175


>sp|TFE_METM7|TRANSCRIPTION factor E|Methanococcus maripaludis (strain C7 /

Query: 4 GGMLYE 9
GGM+YE
Sbjct: 140 GGMMYE 145


>sp|TFE_METM5|TRANSCRIPTION factor E|Methanococcus maripaludis (strain C5 /

Query: 4 GGMLYE 9
GGM+YE
Sbjct: 140 GGMMYE 145


>sp|FTHS_HALMA|FORMATE--TETRAHYDROFOLATE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 RYTGGMLYEI 10
+YTGG L +I
Sbjct: 459 KYTGGALDDI 468


>sp|IPK_METJA|ISOPENTENYL phosphate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TGGMLYEI 10
TGGM Y+I
Sbjct: 215 TGGMKYKI 222


>sp|RS11_KORCO|SMALL ribosomal subunit protein uS11|Korarchaeum cryptofilum (strain

Query: 1 RYTGGMLYE 9
RY+GGM +
Sbjct: 36 RYSGGMFVD 44


>sp|FLPA_METTP|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanothrix thermoacetophila

Query: 3 TGGMLYEI 10
TGGM+Y +
Sbjct: 83 TGGMIYAV 90


>sp|SPSS1_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocella arvoryzae (strain DSM 22066

Query: 2 YTGGMLYEI 10
Y GGML +I
Sbjct: 52 YCGGMLDQI 60


>sp|ENO_PICTO|ENOLASE torridus (strain ATCC 700027

Query: 1 RYTGGMLYEI 10
RY GG+ Y +
Sbjct: 124 RYVGGINYSM 133


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 RYTGGMLYEI 10
RY GG++ ++
Sbjct: 2061 RYVGGLIGDV 2070




105|SequenceR|530|521|RTYTCRYTGG

>sp|MCRG_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 1 RTYTCRYTGG 10
R Y CRY G
Sbjct: 103 RAYLCRYRGA 112


>sp|MCRG_METTH|METHYL-COENZYME M reductase I subunit|Methanothermobacter thermautotrophicus

Query: 1 RTYTCRYTGG 10
R Y CRY G
Sbjct: 103 RAYLCRYRGA 112


>sp|LEU3_HALVD|3-ISOPROPYLMALATE dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 3 YTCRYTGG 10
Y C Y GG
Sbjct: 148 YACDYVGG 155


>sp|PURP_METMP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain DSM

Query: 3 YTCRYTG 9
Y+C YTG
Sbjct: 328 YSCLYTG 334


>sp|PURP_METM7|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C7 /

Query: 3 YTCRYTG 9
Y+C YTG
Sbjct: 328 YSCLYTG 334


>sp|PURP_METM6|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C6 /

Query: 3 YTCRYTG 9
Y+C YTG
Sbjct: 328 YSCLYTG 334


>sp|PURP_METM5|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C5 /

Query: 3 YTCRYTG 9
Y+C YTG
Sbjct: 328 YSCLYTG 334


>sp|MCRZ_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 RTYTCRYTG 9
RTY RY G
Sbjct: 106 RTYMWRYRG 114


>sp|MCRZ_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 RTYTCRYTG 9
RTY RY G
Sbjct: 106 RTYMWRYRG 114


>sp|Y405_HALVD|PROBABLE cell surface fusion protein|Haloferax volcanii (strain ATCC 29605

Query: 1 RTYTCRYTGG 10
R YT Y GG
Sbjct: 347 RLYTSWYRGG 356


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 2 TYTCRYTGG 10
TY +TGG
Sbjct: 631 TYVATFTGG 639


>sp|DNAJ_HALMT|CHAPERONE protein DnaJ|Haloferax mediterranei (strain ATCC 33500

Query: 1 RTYTCRYTGG 10
+T TCR GG
Sbjct: 199 QTTTCRACGG 208


>sp|Y2120_ARCFU|UNCHARACTERIZED protein AF_2120|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RTYTCRYTGG 10
++Y C TGG
Sbjct: 105 KSYECIQTGG 114


>sp|Y1653_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 5 CRYTGG 10
C YTGG
Sbjct: 220 CCYTGG 225


>sp|Y1649_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 5 CRYTGG 10
C YTGG
Sbjct: 221 CCYTGG 226




106|SequenceR|535|526|LRFRKRTYTC

>sp|Y1154_METJA|UNCHARACTERIZED protein MJ1154|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RFRKRTY 8
RF +RTY
Sbjct: 435 RFNRRTY 441




107|SequenceR|540|531|LSNYILRFRK

>sp|RL1_SACS2|LARGE ribosomal subunit protein uL1|Saccharolobus solfataricus (strain

Query: 1 LSNYILRFRK 10
+S YILRF++
Sbjct: 145 ISEYILRFKR 154


>sp|RL1_SULTO|LARGE ribosomal subunit protein uL1|Sulfurisphaera tokodaii (strain DSM

Query: 1 LSNYILRFRK 10
++ YILRF++
Sbjct: 144 ITEYILRFKR 153


>sp|RL1_METS5|LARGE ribosomal subunit protein uL1|Metallosphaera sedula (strain ATCC

Query: 1 LSNYILRFRK 10
+S YILR+++
Sbjct: 144 VSEYILRYKR 153


>sp|Y482_METM7|UPF0280 protein MmarC7_0482|Methanococcus maripaludis (strain C7 /

Query: 1 LSNYILR 7
L NYILR
Sbjct: 39 LENYILR 45


>sp|Y355_METM5|UPF0280 protein MmarC5_0355|Methanococcus maripaludis (strain C5 /

Query: 1 LSNYILR 7
L NYILR
Sbjct: 39 LENYILR 45


>sp|Y1236_METMP|UPF0280 protein MMP1236|Methanococcus maripaludis (strain DSM 14266

Query: 1 LSNYILR 7
L NYILR
Sbjct: 39 LENYILR 45


>sp|GGR2_METTH|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LSNYILRFRK 10
LS Y +R+RK
Sbjct: 314 LSRYEMRWRK 323


>sp|Y1455_METJA|UNCHARACTERIZED protein MJ1455|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LSNYILRFR 9
+S+YI+ FR
Sbjct: 195 ISDYIMHFR 203




108|SequenceR|545|536|RNNGGLSNYI

>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 NGGLSNYI 10
N GLSNY+
Sbjct: 252 NEGLSNYL 259


>sp|LEUD_PYRIL|3-ISOPROPYLMALATE dehydratase small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 4 GGLSNYI 10
GGL+NY+
Sbjct: 151 GGLTNYL 157


>sp|TRUD_THEON|PROBABLE tRNA pseudouridine synthase D|Thermococcus onnurineus (strain NA1)

Query: 1 RNNGGLSNY 9
R+ GG NY
Sbjct: 154 RSKGGFPNY 162


>sp|GGGPS_CALMQ|GERANYLGERANYLGLYCERYL phosphate synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 NNGGLSNYI 10
N G L NYI
Sbjct: 56 NEGTLDNYI 64


>sp|GCH1_SULTO|GTP cyclohydrolase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RNNGGLSNYI 10
+NN L NY+
Sbjct: 185 KNNVSLRNYV 194


>sp|PYRDB_THEVO|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Thermoplasma volcanium (strain

Query: 4 GGLSNY 9
GG+SNY
Sbjct: 239 GGISNY 244


>sp|ARADH_SACS2|D-ARABINOSE 1-dehydrogenase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 3 NGGLSNYI 10
NGG S Y+
Sbjct: 124 NGGFSEYM 131




109|SequenceR|550|541|NRGSRRNNGG

>sp|MUTS1_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 2 RGSRRNNGG 10
RGS +N+GG
Sbjct: 816 RGSEQNDGG 824


>sp|RS15_NITMS|SMALL ribosomal subunit protein uS15|Nitrosopumilus maritimus (strain

Query: 1 NRGSRRN 7
N+G RRN
Sbjct: 105 NKGDRRN 111


>sp|RL15_METS3|LARGE ribosomal subunit protein uL15|Methanobrevibacter smithii (strain

Query: 2 RGSRRNNGG 10
RGSR N GG
Sbjct: 12 RGSRSNGGG 20


>sp|NADK_HALMA|NAD kinase|Haloarcula marismortui (strain ATCC 43049

Query: 2 RGSRRNNGG 10
+G RR +GG
Sbjct: 151 QGERRGHGG 159




110|SequenceR|555|546|TSSSTNRGSR

>sp|KTHY_METS5|PROBABLE thymidylate kinase|Metallosphaera sedula (strain ATCC 51363

Query: 2 SSSTNRGSR 10
SSST+RGS+
Sbjct: 186 SSSTSRGSQ 194




111|SequenceR|560|551|KRLQPTSSST

>sp|COFG_METB6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoregula boonei (strain DSM 21154

Query: 1 KRLQPTSSS 9
KRL+PT++S
Sbjct: 116 KRLRPTNAS 124




112|SequenceR|565|556|FSEHSKRLQP

>sp|GATE_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Archaeoglobus fulgidus (strain ATCC

Query: 1 FSEHSKRLQP 10
F E+S++LQP
Sbjct: 473 FEEYSEKLQP 482


>sp|IPYR_AERPE|INORGANIC pyrophosphatase|Aeropyrum pernix (strain ATCC 700893

Query: 1 FSEHSKRLQP 10
F EH K L+P
Sbjct: 138 FFEHYKELEP 147


>sp|IPYR_SULAC|INORGANIC pyrophosphatase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FSEHSKRLQP 10
F EH K L+P
Sbjct: 134 FFEHYKELEP 143


>sp|IPYR_SULTO|INORGANIC pyrophosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FSEHSKRLQP 10
F EH K L+P
Sbjct: 134 FFEHYKELEP 143


>sp|IPYR_SACS2|INORGANIC pyrophosphatase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FSEHSKRLQP 10
F EH K L+P
Sbjct: 134 FFEHYKELEP 143


>sp|AATE_SULAC|A-TYPE ATP synthase subunit E|Sulfolobus acidocaldarius (strain ATCC

Query: 1 FSEHSKRLQ 9
SE+SKR+Q
Sbjct: 42 LSEYSKRIQ 50


>sp|TRUA_PYRIL|TRNA pseudouridine synthase A|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FSEHSKRLQP 10
F+ HS+ L+P
Sbjct: 17 FTGHSRSLEP 26


>sp|Y1582_METJA|UNCHARACTERIZED metal-dependent hydrolase MJ1582|Methanocaldococcus jannaschii

Query: 1 FSEHSKRL 8
FSEH K+L
Sbjct: 177 FSEHHKKL 184


>sp|RLMH_METB6|PUTATIVE ribosomal RNA large subunit|Methanoregula boonei (strain DSM

Query: 2 SEHSKRLQP 10
+E++KRL P
Sbjct: 21 AEYTKRLSP 29


>sp|Y3501_METJA|UNCHARACTERIZED protein MJECL01|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FSEHSKRLQP 10
++EH K L P
Sbjct: 178 YNEHIKSLHP 187




113|SequenceR|570|561|DARNGFSEHS

>sp|FAU1_SULAC|PROBABLE ribonuclease FAU-1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DARNGFSEH 9
D R FSEH
Sbjct: 136 DGRTFFSEH 144


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 DARNGF 6
D+RNGF
Sbjct: 5408 DSRNGF 5413




114|SequenceR|575|566|MKEKKDARNG

>sp|THIC_IGNH4|PHOSPHOMETHYLPYRIMIDINE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 MKEKKDARNG 10
M KDARNG
Sbjct: 1 MTIYKDARNG 10


>sp|DNAG_THEON|DNA primase DnaG|Thermococcus onnurineus (strain NA1)

Query: 1 MKEKKDARNG 10
+KEK+ A+NG
Sbjct: 314 IKEKERAKNG 323


>sp|AROC_HALWD|CHORISMATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 EKKDARNG 10
E KDAR+G
Sbjct: 86 ENKDARSG 93




115|SequenceR|580|571|FHNHRMKEKK

>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 FHNHRMKE 8
F NHR+K+
Sbjct: 1127 FENHRVKQ 1134


>sp|HDRD_METBF|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina barkeri (strain

Query: 1 FHNHRMKEKK 10
+HN MK++K
Sbjct: 138 YHNPYMKDQK 147


>sp|HDRD_METMA|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina mazei (strain

Query: 1 FHNHRMKEKK 10
+HN MK++K
Sbjct: 138 YHNPYMKDQK 147


>sp|RS9_METTP|SMALL ribosomal subunit protein uS9|Methanothrix thermoacetophila (strain

Query: 3 NHRMKEKK 10
+HR KEKK
Sbjct: 109 DHRQKEKK 116


>sp|RRP4_METMA|EXOSOME complex component Rrp4|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 NHRMKEKK 10
N RMKEK+
Sbjct: 216 NERMKEKE 223


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 FHNHRMKE 8
F NH++K+
Sbjct: 1126 FENHKVKQ 1133


>sp|Y555_METJA|PUTATIVE aminopeptidase MJ0555|Methanocaldococcus jannaschii (strain ATCC

Query: 4 HRMKEKK 10
HRMKE++
Sbjct: 116 HRMKEEE 122


>sp|RL30_AERPE|LARGE ribosomal subunit protein uL30|Aeropyrum pernix (strain ATCC 700893

Query: 1 FHNHRMKEK 9
H HR++EK
Sbjct: 107 LHYHRLEEK 115


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FHNHRMKE 8
F NH++K+
Sbjct: 1133 FENHKVKQ 1140




116|SequenceR|585|576|QATKIFHNHR

>sp|Y695_THEPD|UPF0201 protein Tpen_0695|Thermofilum pendens (strain DSM 2475

Query: 5 IFHNHR 10
+FHNH+
Sbjct: 47 VFHNHK 52


>sp|BIOF_METVS|PUTATIVE 8-amino-7-oxononanoate synthase|Methanococcus vannielii (strain

Query: 2 ATKIFHNH 9
A K+F NH
Sbjct: 289 ANKLFKNH 296




117|SequenceR|590|581|KPRYPQATKI

>sp|RS8_THEPD|SMALL ribosomal subunit protein uS8|Thermofilum pendens (strain DSM

Query: 1 KPRYP 5
KPRYP
Sbjct: 75 KPRYP 79


>sp|HIS82_ARCFU|HISTIDINOL-PHOSPHATE aminotransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PRYPQA 7
PRYP+A
Sbjct: 53 PRYPKA 58


>sp|RS8_PYRNV|SMALL ribosomal subunit protein uS8|Pyrobaculum neutrophilum (strain

Query: 1 KPRYP 5
KPRYP
Sbjct: 76 KPRYP 80


>sp|NFI_HALMA|ENDONUCLEASE V|Haloarcula marismortui (strain ATCC 43049

Query: 3 RYPQATKI 10
RYP+ T+I
Sbjct: 183 RYPEGTRI 190


>sp|RS8_DESA1|SMALL ribosomal subunit protein uS8|Desulfurococcus amylolyticus

Query: 1 KPRYP 5
KPRYP
Sbjct: 76 KPRYP 80




118|SequenceR|595|586|MVTDIKPRYP

>sp|RLME_NATPD|RIBOSOMAL RNA large subunit methyltransferase|Natronomonas pharaonis (strain

Query: 2 VTDIKPRY 9
VTD+KPR+
Sbjct: 238 VTDVKPRF 245


>sp|RLME_HALSA|RIBOSOMAL RNA large subunit methyltransferase|Halobacterium salinarum (strain

Query: 2 VTDIKPRY 9
VTD+KP Y
Sbjct: 243 VTDLKPNY 250


>sp|RLME_HALS3|RIBOSOMAL RNA large subunit methyltransferase|Halobacterium salinarum (strain

Query: 2 VTDIKPRY 9
VTD+KP Y
Sbjct: 243 VTDLKPNY 250


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 3 TDIKPRYP 10
T+I P+YP
Sbjct: 736 TEISPKYP 743


>sp|RS8_PYRNV|SMALL ribosomal subunit protein uS8|Pyrobaculum neutrophilum (strain

Query: 5 IKPRYP 10
IKPRYP
Sbjct: 75 IKPRYP 80


>sp|RS8_DESA1|SMALL ribosomal subunit protein uS8|Desulfurococcus amylolyticus

Query: 5 IKPRYP 10
IKPRYP
Sbjct: 75 IKPRYP 80


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 3 TDIKPRYP 10
T+I P+YP
Sbjct: 736 TEISPKYP 743


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 3 TDIKPRYP 10
T+I P+YP
Sbjct: 736 TEISPKYP 743


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 3 TDIKPRYP 10
T+I P+YP
Sbjct: 736 TEISPKYP 743


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 3 TDIKPRYP 10
T+I P+YP
Sbjct: 736 TEISPKYP 743


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 3 TDIKPRYP 10
T+I P+YP
Sbjct: 736 TEISPKYP 743


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 3 TDIKPRYP 10
T+I P+YP
Sbjct: 736 TEISPKYP 743


>sp|RLME_HALMA|RIBOSOMAL RNA large subunit methyltransferase|Haloarcula marismortui (strain

Query: 2 VTDIKPRY 9
+ D+KPRY
Sbjct: 249 IDDVKPRY 256


>sp|RS8_THEPD|SMALL ribosomal subunit protein uS8|Thermofilum pendens (strain DSM

Query: 5 IKPRYP 10
IKPRYP
Sbjct: 74 IKPRYP 79


>sp|THIC_METPE|PHOSPHOMETHYLPYRIMIDINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 MVTDIKPRY 9
+VTDI P Y
Sbjct: 296 LVTDIAPGY 304


>sp|THIC_METLZ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 MVTDIKPRY 9
+VTDI P Y
Sbjct: 296 LVTDIAPGY 304


>sp|THIC2_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 MVTDIKPRY 9
+VTDI P Y
Sbjct: 296 LVTDIAPGY 304


>sp|RS8_THEON|SMALL ribosomal subunit protein uS8|Thermococcus onnurineus (strain

Query: 5 IKPRYP 10
IKPR+P
Sbjct: 75 IKPRFP 80


>sp|RS8_PYRFU|SMALL ribosomal subunit protein uS8|Pyrococcus furiosus (strain ATCC

Query: 5 IKPRYP 10
IKPR+P
Sbjct: 75 IKPRFP 80


>sp|RS8_METJA|SMALL ribosomal subunit protein uS8|Methanocaldococcus jannaschii

Query: 5 IKPRYP 10
IKPR+P
Sbjct: 75 IKPRFP 80


>sp|RS8_THEKO|SMALL ribosomal subunit protein uS8|Thermococcus kodakarensis (strain

Query: 5 IKPRYP 10
IKPR+P
Sbjct: 75 IKPRFP 80


>sp|RS8_THEGJ|SMALL ribosomal subunit protein uS8|Thermococcus gammatolerans (strain

Query: 5 IKPRYP 10
IKPR+P
Sbjct: 75 IKPRFP 80


>sp|THIC1_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 MVTDIKPRY 9
+VTDI P Y
Sbjct: 296 LVTDIAPGY 304


>sp|CDC6K_HALMA|ORC1-TYPE DNA replication protein 11|Haloarcula marismortui (strain ATCC

Query: 4 DIKPRY 9
DI+PRY
Sbjct: 320 DIRPRY 325


>sp|THIC_METMJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 MVTDIKPRY 9
+VTDI P Y
Sbjct: 296 LVTDIAPGY 304


>sp|RS8_THEAC|SMALL ribosomal subunit protein uS8|Thermoplasma acidophilum (strain

Query: 5 IKPRYP 10
IKPR+P
Sbjct: 74 IKPRFP 79


>sp|THIC_METHJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 MVTDIKPRY 9
+VTDI P Y
Sbjct: 296 IVTDIAPGY 304


>sp|RS8_THEVO|SMALL ribosomal subunit protein uS8|Thermoplasma volcanium (strain ATCC

Query: 5 IKPRYP 10
IKPR+P
Sbjct: 74 IKPRFP 79


>sp|RS8_PYRHO|SMALL ribosomal subunit protein uS8|Pyrococcus horikoshii (strain ATCC

Query: 5 IKPRYP 10
IKPR+P
Sbjct: 75 IKPRFP 80


>sp|RS8_PYRAB|SMALL ribosomal subunit protein uS8|Pyrococcus abyssi (strain GE5 /

Query: 5 IKPRYP 10
IKPR+P
Sbjct: 75 IKPRFP 80


>sp|THIC2_METST|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 MVTDIKPRY 9
+VTDI P Y
Sbjct: 296 IVTDIAPAY 304


>sp|RS8_NANEQ|SMALL ribosomal subunit protein uS8|Nanoarchaeum equitans (strain

Query: 5 IKPRYP 10
IKPR+P
Sbjct: 74 IKPRFP 79


>sp|THIC_METB6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 MVTDIKPRY 9
+VTDI P Y
Sbjct: 296 IVTDIAPGY 304


>sp|RLME_METAR|RIBOSOMAL RNA large subunit methyltransferase|Methanocella arvoryzae (strain

Query: 2 VTDIKPRY 9
+TD+KP +
Sbjct: 239 ITDVKPSF 246


>sp|RLME_METBF|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina barkeri (strain

Query: 2 VTDIKPRY 9
+TD+KP +
Sbjct: 240 ITDVKPNF 247


>sp|TRF3_THEVO|TRICORN protease-interacting factor F3|Thermoplasma volcanium (strain ATCC

Query: 2 VTDIKPRYP 10
+ DIK +YP
Sbjct: 188 LKDIKSKYP 196


>sp|THIC_METJA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MVTDIKPRY 9
+VTDI P Y
Sbjct: 296 IVTDIAPGY 304


>sp|METK_METBF|S-ADENOSYLMETHIONINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 MVTDIKPRYP 10
++TD+K R P
Sbjct: 180 LLTDLKSRMP 189


>sp|TRPC_METJA|INDOLE-3-GLYCEROL phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 MVTDIKPRYP 10
++T+IKP P
Sbjct: 60 IITEIKPSSP 69


>sp|METK_METMA|S-ADENOSYLMETHIONINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MVTDIKPRYP 10
++TD+K R P
Sbjct: 180 LLTDLKSRMP 189


>sp|METK_METAC|S-ADENOSYLMETHIONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 MVTDIKPRYP 10
++TD+K R P
Sbjct: 180 LLTDLKSRMP 189


>sp|Y1684_METTH|UNCHARACTERIZED protein MTH_1684|Methanothermobacter thermautotrophicus (strain

Query: 4 DIKPRY 9
D+KPRY
Sbjct: 266 DMKPRY 271


>sp|RS8_STAMF|SMALL ribosomal subunit protein uS8|Staphylothermus marinus (strain

Query: 5 IKPRYP 10
IKPR+P
Sbjct: 75 IKPRFP 80


>sp|TRF2_THEVO|TRICORN protease-interacting factor F2|Thermoplasma volcanium (strain ATCC

Query: 2 VTDIKPRYP 10
+ DIK +YP
Sbjct: 193 LKDIKSKYP 201


>sp|METK_METHJ|S-ADENOSYLMETHIONINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 TDIKPRYP 10
T ++P+YP
Sbjct: 184 TTLRPKYP 191


>sp|SYW_PYRCJ|TRYPTOPHAN--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 DIKPRYP 10
DIKP YP
Sbjct: 157 DIKPLYP 163


>sp|SYW_PYRAE|TRYPTOPHAN--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 DIKPRYP 10
DIKP YP
Sbjct: 157 DIKPLYP 163


>sp|THIC_HALSA|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 MVTDIKPRY 9
+VTDI P Y
Sbjct: 292 LVTDIAPGY 300


>sp|THIC_HALS3|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 MVTDIKPRY 9
+VTDI P Y
Sbjct: 292 LVTDIAPGY 300


>sp|RS8_PYRIL|SMALL ribosomal subunit protein uS8|Pyrobaculum islandicum (strain DSM

Query: 5 IKPRYP 10
I+PRYP
Sbjct: 75 IRPRYP 80


>sp|RS8_PYRAR|SMALL ribosomal subunit protein uS8|Pyrobaculum arsenaticum (strain DSM

Query: 5 IKPRYP 10
I+PRYP
Sbjct: 75 IRPRYP 80


>sp|MRE11_PYRFU|DNA double-strand break repair protein|Pyrococcus furiosus (strain ATCC

Query: 1 MVTDIKPRY 9
+V D KPR+
Sbjct: 257 IVEDFKPRF 265


>sp|SYE_SACS2|GLUTAMATE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VTDIKPRYP 10
+T+IK +YP
Sbjct: 69 LTEIKAKYP 77


>sp|RS8_PYRAE|SMALL ribosomal subunit protein uS8|Pyrobaculum aerophilum (strain ATCC

Query: 5 IKPRYP 10
I+PRYP
Sbjct: 75 IRPRYP 80


>sp|RS8_KORCO|SMALL ribosomal subunit protein uS8|Korarchaeum cryptofilum (strain

Query: 5 IKPRYP 10
IKPR+P
Sbjct: 75 IKPRFP 80


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 2 VTDIKPRYP 10
+ DIK +YP
Sbjct: 193 LKDIKSKYP 201


>sp|THIC1_METST|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 MVTDIKPRY 9
+VTD+ P Y
Sbjct: 296 LVTDVAPGY 304


>sp|IF2P_IGNH4|PROBABLE translation initiation factor IF-2|Ignicoccus hospitalis (strain

Query: 5 IKPRYP 10
IKP+YP
Sbjct: 502 IKPKYP 507


>sp|THIC_NATPD|PHOSPHOMETHYLPYRIMIDINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 MVTDIKPRY 9
+VTD+ P Y
Sbjct: 292 LVTDVAPGY 300


>sp|THIC_HALMA|PHOSPHOMETHYLPYRIMIDINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 MVTDIKPRY 9
+VTD+ P Y
Sbjct: 291 LVTDVAPGY 299


>sp|MRE11_PYRAB|DNA double-strand break repair protein|Pyrococcus abyssi (strain GE5 /

Query: 1 MVTDIKPRY 9
+V D KPR+
Sbjct: 259 IVEDFKPRF 267


>sp|AROD_PYRAB|3-DEHYDROQUINATE dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 4 DIKPRY 9
+IKPRY
Sbjct: 78 EIKPRY 83


>sp|SYS_ARCFU|SERINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VTDIKP 7
VTD+KP
Sbjct: 151 VTDVKP 156




119|SequenceR|600|591|KKGEEMVTDI

>sp|RL10E_METKA|LARGE ribosomal subunit protein uL16|Methanopyrus kandleri (strain AV19 /

Query: 2 KGEEMVTD 9
KGEE+V D
Sbjct: 166 KGEELVQD 173


>sp|GUAAA_METBF|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosarcina barkeri

Query: 1 KKGEEMVTD 9
+KGEE++T+
Sbjct: 173 EKGEELLTN 181


>sp|RS4_METTP|SMALL ribosomal subunit protein uS4|Methanothrix thermoacetophila (strain

Query: 1 KKGEEMVTD 9
K+G+EM D
Sbjct: 148 KRGDEMTID 156




120|SequenceR|605|596|DKTRKKKGEE

>sp|Y692_ARCFU|UNCHARACTERIZED protein AF_0692|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KTRKKKGE 9
KT +KKGE
Sbjct: 254 KTSEKKGE 261


>sp|PUR7_ARCFU|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 1 DKTRKKKGEE 10
DK R+ KG+E
Sbjct: 268 DKVRQLKGQE 277


>sp|Y482_METJA|UNCHARACTERIZED protein MJ0482|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DKTRKKKGE 9
+K RK+KGE
Sbjct: 61 EKARKRKGE 69




121|SequenceR|610|601|IDVIEDKTRK

>sp|GLYA_PICTO|SERINE hydroxymethyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 IDVIEDKT 8
+DVIEDKT
Sbjct: 71 VDVIEDKT 78


>sp|GLYA_THEVO|SERINE hydroxymethyltransferase|Thermoplasma volcanium (strain ATCC

Query: 1 IDVIEDKTRK 10
+D+IEDKT +
Sbjct: 65 VDLIEDKTNE 74


>sp|GLYA_THEAC|SERINE hydroxymethyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 IDVIEDKTRK 10
+D+IED+T +
Sbjct: 65 VDLIEDRTNE 74


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IDVIEDKTRK 10
+D+ E+KTR+
Sbjct: 636 VDIGEEKTRQ 645


>sp|IMDH_METJA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IDVIEDKTRK 10
+ IEDKT+K
Sbjct: 142 VKAIEDKTKK 151


>sp|DNLI_NANEQ|DNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 IDVIEDKTRK 10
++ I DKTRK
Sbjct: 13 LETISDKTRK 22


>sp|SYFA_METM7|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C7 /

Query: 1 IDVIEDKTR 9
+++IE+KTR
Sbjct: 49 LEIIENKTR 57


>sp|LYSX_SACS2|ALPHA-AMINOADIPATE--LYSW ligase LysX|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IDVIEDKTR 9
ID+ EDK R
Sbjct: 229 IDIFEDKDR 237


>sp|MTNA_METST|PUTATIVE methylthioribose-1-phosphate isomerase|Methanosphaera stadtmanae

Query: 1 IDVIEDKTR 9
IDVI D+TR
Sbjct: 165 IDVICDETR 173


>sp|RS24_METS3|SMALL ribosomal subunit protein eS24|Methanobrevibacter smithii (strain

Query: 1 IDVIEDKTRK 10
ID+ EDK K
Sbjct: 3 IDIFEDKENK 12


>sp|CCA_PYRAB|CCA-ADDING enzyme|Pyrococcus abyssi (strain GE5 /

Query: 1 IDVIEDKTRK 10
+DV+ED RK
Sbjct: 396 VDVLEDILRK 405




122|SequenceR|615|606|TEPDDIDVIE

>sp|Y798_METJA|TPR repeat-containing protein MJ0798|Methanocaldococcus jannaschii

Query: 2 EPDDIDVI 9
+PDDID+I
Sbjct: 232 KPDDIDLI 239


>sp|THIOL_METJA|ACETYL-COA acetyltransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EPDDIDVIE 10
EP D+DV E
Sbjct: 274 EPKDVDVAE 282


>sp|RS3_THEON|SMALL ribosomal subunit protein uS3|Thermococcus onnurineus (strain NA1)

Query: 3 PDDIDVIE 10
PD+I+VIE
Sbjct: 190 PDEIEVIE 197


>sp|RS3_PYRFU|SMALL ribosomal subunit protein uS3|Pyrococcus furiosus (strain ATCC

Query: 3 PDDIDVIE 10
PD+I++IE
Sbjct: 190 PDEIEIIE 197


>sp|RS3_PYRAB|SMALL ribosomal subunit protein uS3|Pyrococcus abyssi (strain GE5 /

Query: 3 PDDIDVIE 10
PD+I++IE
Sbjct: 190 PDEIEIIE 197


>sp|RS3_PYRHO|SMALL ribosomal subunit protein uS3|Pyrococcus horikoshii (strain ATCC

Query: 3 PDDIDVIE 10
PD+I+++E
Sbjct: 190 PDEIEIVE 197


>sp|CARB2_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 1 TEPDDIDVIE 10
T+PDD+D +E
Sbjct: 107 TDPDDVDRLE 116


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 1 TEPDDIDVIE 10
T+PDD+D+ E
Sbjct: 658 TDPDDMDLAE 667


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 1 TEPDDIDVIE 10
T PD++DV E
Sbjct: 646 TSPDNMDVAE 655


>sp|KAE1_PYRHO|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus horikoshii

Query: 4 DDIDVI 9
DDIDVI
Sbjct: 67 DDIDVI 72


>sp|RS3_THESM|SMALL ribosomal subunit protein uS3|Thermococcus sibiricus (strain DSM

Query: 3 PDDIDVIE 10
PD+I+++E
Sbjct: 190 PDEIEIVE 197


>sp|SURE_PICTO|5'-NUCLEOTIDASE SurE|Picrophilus torridus (strain ATCC 700027

Query: 3 PDDIDVI 9
PDD+D++
Sbjct: 153 PDDVDIL 159


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 1 TEPDDIDVIE 10
T PD ID+ E
Sbjct: 659 TSPDSIDIAE 668


>sp|RS5_SULTO|SMALL ribosomal subunit protein uS5|Sulfurisphaera tokodaii (strain DSM

Query: 1 TEPDDIDVI 9
TEP+ +DV+
Sbjct: 42 TEPEIVDVL 50


>sp|KAE1_PYRAB|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus abyssi

Query: 4 DDIDVI 9
DDIDVI
Sbjct: 67 DDIDVI 72


>sp|KAE1_METKA|TRNA N6-adenosine threonylcarbamoyltransferase|Methanopyrus kandleri

Query: 2 EPDDIDVI 9
EP+DID++
Sbjct: 67 EPEDIDLV 74


>sp|RS5_SACI1|SMALL ribosomal subunit protein uS5|Saccharolobus islandicus (strain

Query: 1 TEPDDIDVI 9
TEP+ +DV+
Sbjct: 42 TEPEIVDVL 50


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DDIDVIE 10
DD+DVIE
Sbjct: 165 DDMDVIE 171


>sp|PURP_THEKO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Thermococcus kodakarensis (strain ATCC

Query: 2 EPDDID 7
+PDDID
Sbjct: 119 DPDDID 124


>sp|RS5_SACS2|SMALL ribosomal subunit protein uS5|Saccharolobus solfataricus (strain

Query: 1 TEPDDIDVI 9
TEP+ +DV+
Sbjct: 42 TEPEIVDVL 50


>sp|THIOL_METTH|ACETYL-COA acetyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 3 PDDIDVIE 10
P DID++E
Sbjct: 273 PGDIDLVE 280


>sp|VHCG_METVO|F420-NON-REDUCING hydrogenase vhc subunit G|Methanococcus voltae

Query: 3 PDDIDV 8
PDDIDV
Sbjct: 48 PDDIDV 53


>sp|HMGCS_PICTO|HYDROXYMETHYLGLUTARYL-COA synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 TEPDDIDVI 9
T+PDD D +
Sbjct: 223 TKPDDYDYV 231


>sp|METE_THEAC|METHIONINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TEPDDIDVI 9
T PD++D++
Sbjct: 185 THPDEMDIV 193


>sp|METE_THEVO|METHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 TEPDDIDVI 9
T PD++D++
Sbjct: 185 THPDEMDIV 193


>sp|ILVC_UNCAG|KETOL-ACID reductoisomerase (NAD(+))|Uncultured archaeon GZfos26G2

Query: 3 PDDIDVI 9
P+D+DVI
Sbjct: 124 PEDVDVI 130


>sp|IMDH_HALSA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 2 EPDDIDV 8
EPDD DV
Sbjct: 36 EPDDADV 42


>sp|Y296_METJA|PROBABLE metallo-hydrolase MJ0296|Methanocaldococcus jannaschii (strain

Query: 3 PDDIDVI 9
P+DIDV+
Sbjct: 76 PNDIDVV 82




123|SequenceR|620|611|YPFRKTEPDD

>sp|MTRH_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanosarcina mazei (strain ATCC

Query: 3 FRKTEPD 9
F+KT+PD
Sbjct: 241 FKKTQPD 247


>sp|MTRH_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanosarcina acetivorans (strain

Query: 3 FRKTEPD 9
F+KT+PD
Sbjct: 241 FKKTQPD 247


>sp|MTRH_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanosarcina barkeri (strain Fusaro

Query: 3 FRKTEPD 9
F+KT+PD
Sbjct: 241 FKKTQPD 247


>sp|IF2P_METLZ|PROBABLE translation initiation factor IF-2|Methanocorpusculum labreanum

Query: 3 FRKTEP 8
FRKT+P
Sbjct: 580 FRKTQP 585


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 YPFRKTEPD 9
Y F K EPD
Sbjct: 212 YNFPKAEPD 220


>sp|PSA_METTE|PROTEASOME subunit alpha|Methanosarcina thermophila

Query: 3 FRKTEPDD 10
FRK EP++
Sbjct: 221 FRKLEPEE 228


>sp|PIWI_ARCFU|PIWI protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YPFRKTEPD 9
Y F+K+ PD
Sbjct: 235 YGFKKSNPD 243


>sp|OGG1_METTH|PROBABLE N-glycosylase/DNA lyase|Methanothermobacter thermautotrophicus

Query: 1 YPFRKTEP 8
Y FRKTE
Sbjct: 243 YGFRKTEA 250


>sp|RS3A_IGNH4|SMALL ribosomal subunit protein eS1|Ignicoccus hospitalis (strain KIN4/I

Query: 1 YPFRKTE 7
YP R+TE
Sbjct: 180 YPIRRTE 186


>sp|PYLS_METBA|PYRROLYSINE--TRNA ligase|Methanosarcina barkeri

Query: 2 PFRKTEPD 9
PFR+ EP+
Sbjct: 180 PFRELEPE 187


>sp|TPIS_SACS2|TRIOSEPHOSPHATE isomerase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YPFRKTEPD 9
YPF +PD
Sbjct: 128 YPFSLLKPD 136


>sp|RL10_HALSA|LARGE ribosomal subunit protein uL10|Halobacterium salinarum (strain ATCC

Query: 1 YPFRKTEPD 9
YP +T PD
Sbjct: 235 YPTERTAPD 243


>sp|RL10_HALS3|LARGE ribosomal subunit protein uL10|Halobacterium salinarum (strain ATCC

Query: 1 YPFRKTEPD 9
YP +T PD
Sbjct: 235 YPTERTAPD 243


>sp|Y855_SACI1|PROTEIN YN1551_0855|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 FRKTEPD 9
FR+T PD
Sbjct: 198 FRETRPD 204


>sp|Y2104_SACI2|PROTEIN LS215_2104|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 FRKTEPD 9
FR+T PD
Sbjct: 198 FRETRPD 204


>sp|Y2063_SACI7|PROTEIN YG5714_2063|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 FRKTEPD 9
FR+T PD
Sbjct: 198 FRETRPD 204


>sp|Y2019_SACI3|PROTEIN M1627_2019|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 FRKTEPD 9
FR+T PD
Sbjct: 198 FRETRPD 204


>sp|Y1949_SACI6|PROTEIN M164_1949|Saccharolobus islandicus (strain M.16.4 /

Query: 3 FRKTEPD 9
FR+T PD
Sbjct: 198 FRETRPD 204


>sp|Y1941_SACI4|PROTEIN M1425_1941|Saccharolobus islandicus (strain M.14.25 /

Query: 3 FRKTEPD 9
FR+T PD
Sbjct: 198 FRETRPD 204


>sp|ILVD_NATPD|DIHYDROXY-ACID dehydratase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 RKTEPDD 10
++TEPDD
Sbjct: 3 QQTEPDD 9




124|SequenceR|625|616|LENLPYPFRK

>sp|DNLI_PICTO|DNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 LENLPYPFRK 10
L NLPYP R+
Sbjct: 351 LVNLPYPERR 360


>sp|GPN_PYRAB|GPN-LOOP GTPase PAB0955|Pyrococcus abyssi (strain GE5 /

Query: 1 LENLPYPF 8
+ENLPYP
Sbjct: 119 MENLPYPL 126


>sp|Y1286_METJA|UNCHARACTERIZED protein MJ1286|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ENLPYPF 8
ENLPY F
Sbjct: 121 ENLPYAF 127


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 ENLPYP 7
EN PYP
Sbjct: 406 ENTPYP 411


>sp|Y103_METJA|UNCHARACTERIZED protein MJ0103|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LPYPFR 9
LPYPF+
Sbjct: 367 LPYPFK 372


>sp|SYFB_METTH|PHENYLALANINE--TRNA ligase beta subunit|Methanothermobacter thermautotrophicus (strain

Query: 1 LENLPYPFR 9
+ENL Y FR
Sbjct: 486 VENLGYEFR 494


>sp|KHSE_PYRAB|HOMOSERINE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 ENLPYPFRK 10
+NL P+RK
Sbjct: 217 DNLALPYRK 225


>sp|KHSE_PYRHO|HOMOSERINE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ENLPYPFRK 10
+NL P+RK
Sbjct: 217 DNLALPYRK 225


>sp|GLCS_SACS2|GLUCOSE-BINDING protein GlcS|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 NLPYPF 8
NLP+P+
Sbjct: 210 NLPFPY 215


>sp|RSMA_METST|PROBABLE ribosomal RNA small subunit|Methanosphaera stadtmanae (strain ATCC

Query: 4 LPYPFRK 10
L YPF+K
Sbjct: 126 LEYPFKK 132


>sp|Y434_METJA|GAMMA-GLUTAMYLCYCLOTRANSFERASE and putative RNase MJ0434|Methanocaldococcus jannaschii (strain

Query: 1 LENLPYPFRK 10
++NLP FR+
Sbjct: 52 IKNLPMEFRE 61




125|SequenceR|630|621|CAWILLENLP

>sp|SAT_THEON|SULFATE adenylyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 AWILLENLP 10
AW + EN P
Sbjct: 297 AWDMFENFP 305


>sp|AATB_NATPD|A-TYPE ATP synthase subunit B|Natronomonas pharaonis (strain ATCC 35678

Query: 2 AWILLENLP 10
AW LL +LP
Sbjct: 436 AWELLSDLP 444


>sp|PHS_SACS2|PUTATIVE pterin-4-alpha-carbinolamine dehydratase|Saccharolobus

Query: 2 AWILLEN 8
WI+LEN
Sbjct: 16 GWIVLEN 22


>sp|KCY_METJA|CYTIDYLATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AWILLEN 8
AW+LL+N
Sbjct: 84 AWMLLKN 90


>sp|DNAG_PYRIL|DNA primase DnaG|Pyrobaculum islandicum (strain DSM 4184

Query: 3 WILLENLP 10
W LL+ LP
Sbjct: 331 WTLLKRLP 338


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 3 WILLENLP 10
W+ +E+LP
Sbjct: 115 WVKVEDLP 122


>sp|Y162_ARCFU|UNCHARACTERIZED protein AF_0162|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WILLEN 8
WILL+N
Sbjct: 13 WILLKN 18


>sp|KDPA_HALSA|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 1 CAWILL 6
C W+LL
Sbjct: 90 CIWVLL 95


>sp|KDPA_HALS3|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 1 CAWILL 6
C W+LL
Sbjct: 90 CIWVLL 95




126|SequenceR|635|626|QRKMLCAWIL

***** No hits found ******


127|SequenceR|640|631|FRAMVQRKML

***** No hits found ******


128|SequenceR|645|636|GHQWLFRAMV

>sp|HYPA_IGNH4|HYDROGENASE maturation factor HypA|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GHQWLFR 7
GH+W F+
Sbjct: 79 GHEWTFK 85


>sp|AMPPA_METTP|AMP phosphorylase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 QWLFRAMV 10
+WL RAM+
Sbjct: 138 EWLTRAMI 145


>sp|AMPPA_METMA|AMP phosphorylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 QWLFRAMV 10
+WL RAM+
Sbjct: 140 EWLTRAMI 147


>sp|AMPPA_METBU|AMP phosphorylase|Methanococcoides burtonii (strain DSM 6242

Query: 3 QWLFRAMV 10
+WL RAM+
Sbjct: 140 EWLTRAMI 147


>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 3 QWLFRAMV 10
+WL RAM+
Sbjct: 139 EWLTRAMI 146


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 QWLFRAMV 10
+WL RAM+
Sbjct: 139 EWLTRAMI 146


>sp|SPEE2_HYPBU|POLYAMINE aminopropyltransferase 2|Hyperthermus butylicus (strain DSM 5456

Query: 2 HQWLFR 7
H+W+FR
Sbjct: 274 HEWMFR 279


>sp|IF2P_PYRCJ|PROBABLE translation initiation factor IF-2|Pyrobaculum calidifontis (strain

Query: 3 QWLFR 7
QWLFR
Sbjct: 564 QWLFR 568


>sp|AMPPA_METAR|AMP phosphorylase|Methanocella arvoryzae (strain DSM 22066

Query: 3 QWLFRAMV 10
+W+ RAMV
Sbjct: 140 EWMTRAMV 147


>sp|FEN_NATPD|FLAP endonuclease 1|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GHQWLFRAM 9
H WL+R +
Sbjct: 29 AHNWLYRYL 37


>sp|FEN_HALWD|FLAP endonuclease 1|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GHQWLFRAM 9
H WL+R +
Sbjct: 29 AHNWLYRYL 37


>sp|FEN_HALMA|FLAP endonuclease 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 GHQWLFRAM 9
H WL+R +
Sbjct: 29 AHNWLYRYL 37


>sp|AMPP2_ARCFU|AMP phosphorylase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QWLFRAMV 10
QW+ AMV
Sbjct: 141 QWMIEAMV 148


>sp|Y912_ARCFU|UNCHARACTERIZED protein AF_0912|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GHQWLFR 7
G +W+FR
Sbjct: 77 GEEWVFR 83


>sp|RIFK_METBU|RIBOFLAVIN kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GHQWL 5
GH+WL
Sbjct: 68 GHKWL 72


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 1 GHQWLFR 7
G++WL+R
Sbjct: 781 GNRWLYR 787




129|SequenceR|650|641|AMSEEGHQWL

>sp|RIFK_METBU|RIBOFLAVIN kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 AMSEEGHQWL 10
+++E+GH+WL
Sbjct: 63 SITEKGHKWL 72


>sp|K6PF_PYRFU|ADP-SPECIFIC phosphofructokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 MSEEGHQWL 10
++EE HQW
Sbjct: 77 VNEELHQWF 85


>sp|ASNH2_METJA|PUTATIVE asparagine synthetase [glutamine-hydrolyzing]

Query: 2 MSEEGHQ 8
+SE+GHQ
Sbjct: 58 LSEKGHQ 64


>sp|AROD_PYRAE|3-DEHYDROQUINATE dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 EEGHQW 9
EEG QW
Sbjct: 66 EEGGQW 71


>sp|CBIMQ_METLZ|PUTATIVE fused cobalt transport protein|Methanocorpusculum labreanum (strain

Query: 2 MSEEGHQWL 10
+SE+ H WL
Sbjct: 296 VSEDMHGWL 304


>sp|PUR7_NITMS|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 MSEEGHQWL 10
+SEE + WL
Sbjct: 145 VSEEQYNWL 153


>sp|TYSY_HALVO|THYMIDYLATE synthase|Haloferax volcanii (Halobacterium volcanii)

Query: 1 AMSEEGHQWL 10
A ++GH+W+
Sbjct: 124 AWPDDGHRWM 133




130|SequenceR|655|646|AVLAKAMSEE

>sp|LEU1_METMA|PROBABLE 2-isopropylmalate synthase|Methanosarcina mazei (strain ATCC

Query: 1 AVLAKAMSEE 10
AVL KA SEE
Sbjct: 386 AVLGKASSEE 395


>sp|LEU1_METAC|PROBABLE 2-isopropylmalate synthase|Methanosarcina acetivorans (strain ATCC

Query: 1 AVLAKAMSEE 10
AVL KA SEE
Sbjct: 386 AVLGKASSEE 395


>sp|VHUA_METVO|F420-NON-REDUCING hydrogenase vhu subunit A|Methanococcus voltae

Query: 3 LAKAMSEE 10
L+K+MSEE
Sbjct: 172 LSKSMSEE 179




131|SequenceR|660|651|RYIKCAVLAK

>sp|PYRK_METTH|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanothermobacter

Query: 1 RYIKCAV 7
RY+KCAV
Sbjct: 213 RYMKCAV 219


>sp|PYRK_METBU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanococcoides burtonii

Query: 1 RYIKCAV 7
RY KCA+
Sbjct: 207 RYFKCAI 213


>sp|PYRK_METAR|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanocella arvoryzae

Query: 1 RYIKCAV 7
RYIKC +
Sbjct: 206 RYIKCGI 212


>sp|Y3535_METJA|UNCHARACTERIZED protein MJECL35|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RYIKCAVLAK 10
RY+KC + K
Sbjct: 597 RYLKCKIAEK 606


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 IKCAVLAK 10
++C+VLAK
Sbjct: 394 VECSVLAK 401


>sp|PYRK_THEKO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermococcus kodakarensis

Query: 1 RYIKCAV 7
RY+KC +
Sbjct: 198 RYMKCGI 204


>sp|PYRK_PYRHO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Pyrococcus horikoshii

Query: 1 RYIKCAV 7
RY+KC +
Sbjct: 196 RYMKCGI 202


>sp|PYRK_PYRFU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Pyrococcus furiosus

Query: 1 RYIKCAV 7
RY+KC +
Sbjct: 197 RYMKCGI 203


>sp|PYRK_PYRAB|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Pyrococcus abyssi (strain

Query: 1 RYIKCAV 7
RY+KC +
Sbjct: 196 RYMKCGI 202


>sp|PYRK_METJA|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanocaldococcus

Query: 1 RYIKCAV 7
RY+KC +
Sbjct: 204 RYMKCGI 210




132|SequenceR|665|656|EYAMSRYIKC

>sp|PYRK_METBU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanococcoides burtonii

Query: 1 EYAMSRYIKC 10
E++M RY KC
Sbjct: 202 EFSMHRYFKC 211


>sp|PYRK_METAR|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanocella arvoryzae

Query: 1 EYAMSRYIKC 10
++++ RYIKC
Sbjct: 201 QFSLQRYIKC 210


>sp|PYRK_METBF|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanosarcina barkeri

Query: 1 EYAMSRYIKC 10
E+++ RY KC
Sbjct: 202 EFSLQRYFKC 211


>sp|PYRK_METMA|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanosarcina mazei

Query: 1 EYAMSRYIKC 10
E+++ RY KC
Sbjct: 202 EFSLHRYFKC 211


>sp|PYRK_METAC|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanosarcina acetivorans

Query: 1 EYAMSRYIKC 10
E+++ RY KC
Sbjct: 202 EFSLHRYFKC 211


>sp|Y1214_PYRHO|UNCHARACTERIZED ABC transporter extracellular-binding protein|Pyrococcus horikoshii

Query: 2 YAMSRYIK 9
Y M+RYIK
Sbjct: 111 YEMARYIK 118


>sp|HELS_PYRCJ|ATP-DEPENDENT DNA helicase Hel308|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EYAMSRYIK 9
EY M RY++
Sbjct: 399 EYLMERYVR 407


>sp|PYRK_METJA|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanocaldococcus

Query: 1 EYAMSRYIKC 10
+ +M RY+KC
Sbjct: 199 QVSMERYMKC 208


>sp|MALQ_THEKO|4-ALPHA-GLUCANOTRANSFERASE kodakarensis (strain ATCC BAA-918

Query: 1 EYAMSRYIK 9
EY +SRYI+
Sbjct: 500 EYRLSRYIE 508


>sp|PYRK_ARCFU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Archaeoglobus fulgidus

Query: 1 EYAMSRYIKC 10
E+++ RY++C
Sbjct: 193 EFSLERYMRC 202


>sp|PYRK_METTH|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanothermobacter

Query: 1 EYAMSRYIKC 10
+ ++ RY+KC
Sbjct: 208 QLSLERYMKC 217


>sp|Y3535_METJA|UNCHARACTERIZED protein MJECL35|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 AMSRYIKC 10
++ RY+KC
Sbjct: 594 SIERYLKC 601


>sp|TRPB2_SACS2|TRYPTOPHAN synthase beta chain 2|Saccharolobus solfataricus (strain ATCC

Query: 1 EYAMSRYIK 9
E+A RY+K
Sbjct: 55 EFAKERYVK 63




133|SequenceR|670|661|DSQKAEYAMS

>sp|ENDA_THEAC|TRNA-SPLICING endonuclease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DSQKAEYAMS 10
DSQ AEY +S
Sbjct: 233 DSQHAEYLVS 242


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DSQKAEYAM 9
DSQKAE+ +
Sbjct: 244 DSQKAEFPI 252




134|SequenceR|675|666|TDDVLDSQKA

>sp|OTC_METKA|ORNITHINE carbamoyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 TDDVLDSQKA 10
TDDV DS+++
Sbjct: 281 TDDVADSERS 290


>sp|OTC_METHJ|ORNITHINE carbamoyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 TDDVLDSQKA 10
TD+VLDS+ +
Sbjct: 271 TDEVLDSKAS 280


>sp|OTC_THEKO|ORNITHINE carbamoyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 TDDVLDS 7
TDDV+DS
Sbjct: 280 TDDVIDS 286


>sp|OTC_PYRHO|ORNITHINE carbamoyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TDDVLDS 7
TDDV+DS
Sbjct: 280 TDDVIDS 286


>sp|OTCA_PYRFU|ORNITHINE carbamoyltransferase, anabolic|Pyrococcus furiosus (strain ATCC

Query: 1 TDDVLDS 7
TDDV+DS
Sbjct: 280 TDDVIDS 286


>sp|OTC_PYRAB|ORNITHINE carbamoyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 TDDVLDS 7
TDDV+DS
Sbjct: 280 TDDVIDS 286


>sp|OTC_PYRIL|ORNITHINE carbamoyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 TDDVLDSQKA 10
TDDV+D ++
Sbjct: 274 TDDVIDGPQS 283


>sp|MCRX_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 TDDVLD 6
TDD+LD
Sbjct: 341 TDDILD 346


>sp|OTC_PYRAE|ORNITHINE carbamoyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 TDDVLDSQKA 10
TDDV+D ++
Sbjct: 274 TDDVIDGPQS 283


>sp|MCRX_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 1 TDDVLD 6
TDD+LD
Sbjct: 342 TDDILD 347


>sp|RFCL_IGNH4|REPLICATION factor C large subunit|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 DDVLDSQKA 10
+DV+D +KA
Sbjct: 16 EDVIDQEKA 24


>sp|MCRA_METVO|METHYL-COENZYME M reductase subunit alpha|Methanococcus voltae

Query: 1 TDDVLD 6
TDD+LD
Sbjct: 343 TDDILD 348


>sp|MCRA_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 TDDVLD 6
TDD+LD
Sbjct: 341 TDDILD 346


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC

Query: 1 TDDVLDSQ 8
TDD LD++
Sbjct: 84 TDDALDTE 91




135|SequenceR|680|671|KLEESTDDVL

>sp|G1PDH_THEVO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KLEESTDDV 9
K+EE T+DV
Sbjct: 80 KIEEETNDV 88


>sp|LMRAC_THEKO|LEUCINE/METHIONINE racemase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KLEESTDDV 9
KLEE+ +DV
Sbjct: 419 KLEEAIEDV 427


>sp|MTM2_METJA|TYPE II methyltransferase M.MjaII|Methanocaldococcus jannaschii (strain

Query: 2 LEESTDDVL 10
LEE T+DV+
Sbjct: 352 LEEYTNDVI 360


>sp|RL10_METTL|LARGE ribosomal subunit protein uL10|Methanothermococcus

Query: 3 EESTDDVL 10
E++TDD+L
Sbjct: 267 EKTTDDIL 274




136|SequenceR|685|676|DNSYQKLEES

>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NSYQKLEES 10
+S+QKLEE+
Sbjct: 128 SSWQKLEET 136


>sp|GLME_HALMA|GLUTAMATE mutase epsilon subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 DNSYQKLEE 9
DN Y+K EE
Sbjct: 97 DNEYEKAEE 105


>sp|GLME_HALSA|GLUTAMATE mutase epsilon subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 DNSYQKLEE 9
DN+Y+K E
Sbjct: 97 DNAYEKAAE 105


>sp|Y2204_ARCFU|UNCHARACTERIZED protein AF_2204|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SYQKLEE 9
SY+KLEE
Sbjct: 85 SYEKLEE 91




137|SequenceR|690|681|ALQGFDNSYQ

>sp|PYRG_AERPE|CTP synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 QGFDNSY 9
+GFDN++
Sbjct: 167 EGFDNTF 173


>sp|MTRE_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanosarcina barkeri (strain Fusaro

Query: 4 GFDNSY 9
GFDNS+
Sbjct: 220 GFDNSW 225


>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 1 ALQGFDNS 8
A QGFD+S
Sbjct: 206 AKQGFDHS 213


>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ALQGFDNS 8
A QGFD+S
Sbjct: 203 AKQGFDHS 210


>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 ALQGFDNS 8
A QGFD+S
Sbjct: 203 AKQGFDHS 210


>sp|MTRE_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanosarcina mazei (strain ATCC

Query: 4 GFDNSY 9
GFDNS+
Sbjct: 220 GFDNSW 225




138|SequenceR|695|686|ELLEVALQGF

>sp|PGP_NATPD|PHOSPHOGLYCOLATE phosphatase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ELLEVALQGF 10
ELLE+A GF
Sbjct: 181 ELLELAGTGF 190


>sp|MTAD_PYRHO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LEVALQGF 10
LEV L+GF
Sbjct: 131 LEVGLRGF 138




139|SequenceR|700|691|QRFSQELLEV

>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 1 QRFSQELLEV 10
QRF ++L+EV
Sbjct: 368 QRFVKDLMEV 377


>sp|RIBL_METMA|FAD synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QRFSQELLE 9
QRF E+LE
Sbjct: 105 QRFDTEILE 113


>sp|GSA_METKA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanopyrus kandleri (strain AV19 /

Query: 1 QRFSQELLE 9
+RF +ELLE
Sbjct: 382 KRFHRELLE 390




140|SequenceR|705|696|AMTEDQRFSQ

>sp|Y801_METJA|UNCHARACTERIZED ATP-binding protein MJ0801|Methanocaldococcus jannaschii (strain

Query: 3 TEDQRFS 9
TE+QRFS
Sbjct: 158 TENQRFS 164


>sp|PGK_HALMA|PHOSPHOGLYCERATE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 AMTEDQRFS 9
M ED+RFS
Sbjct: 327 GMFEDERFS 335


>sp|PGK_HALVA|PHOSPHOGLYCERATE kinase|Haloarcula vallismortis (Halobacterium vallismortis)

Query: 1 AMTEDQRFS 9
M ED+RFS
Sbjct: 328 GMFEDERFS 336


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 EDQRFSQ 10
ED+R+SQ
Sbjct: 227 EDERYSQ 233


>sp|PRIL_METAR|DNA primase large subunit PriL|Methanocella arvoryzae (strain DSM

Query: 1 AMTEDQ 6
AMTEDQ
Sbjct: 78 AMTEDQ 83




141|SequenceR|710|701|TLLKMAMTED

>sp|DAPF_ARCFU|DIAMINOPIMELATE epimerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LLKMAMTED 10
LLK+ +TED
Sbjct: 247 LLKIELTED 255


>sp|THSA_THEK8|CHAPERONIN subunit alpha|Thermococcus sp. (strain KS-8)

Query: 1 TLLKMAMT 8
TLL++AMT
Sbjct: 153 TLLRIAMT 160


>sp|THSB_METTH|CHAPERONIN subunit beta|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 TLLKMAMT 8
TL+K+AMT
Sbjct: 150 TLMKVAMT 157




142|SequenceR|715|706|NKLEYTLLKM

>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 EYTLLKM 10
EYTLLK+
Sbjct: 1068 EYTLLKL 1074




143|SequenceR|720|711|TSNSWNKLEY

>sp|Y2344_ARCFU|UNCHARACTERIZED protein AF_2344|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TSNSWNKLE 9
T NSW +LE
Sbjct: 23 TENSWEELE 31


>sp|SYFA_METTH|PHENYLALANINE--TRNA ligase alpha subunit|Methanothermobacter thermautotrophicus (strain

Query: 2 SNSWNKLEY 10
S +W KL Y
Sbjct: 222 SGAWRKLHY 230


>sp|ILVD_IGNH4|DIHYDROXY-ACID dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 SNSWNKL 8
+NSWN++
Sbjct: 37 ANSWNEI 43


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 TSNSWNK 7
T+NSW K
Sbjct: 269 TNNSWQK 275


>sp|Y3538_METJA|UNCHARACTERIZED protein MJECL38|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SNSWNKLEY 10
SN+W+K+ Y
Sbjct: 158 SNNWSKIAY 166


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 3 NSWNKLE 9
NSW+K+E
Sbjct: 718 NSWDKVE 724




144|SequenceR|725|716|ALKLCTSNSW

>sp|AMPPA_METTP|AMP phosphorylase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LKLCTSNSW 10
L +C+S W
Sbjct: 465 LTICSSTDW 473


>sp|Y761_ARCFU|UNCHARACTERIZED protein AF_0761|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LCTSNSW 10
LC N W
Sbjct: 75 LCAKNGW 81




145|SequenceR|730|721|LRSSVALKLC

>sp|SYP_PICTO|PROLINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 SSVALKLC 10
SS+A KLC
Sbjct: 179 SSIAEKLC 186




146|SequenceR|735|726|AVFPRLRSSV

>sp|GLYA_CALMQ|SERINE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 1 AVFPRLRSS 9
AVFP+L S+
Sbjct: 253 AVFPQLTSN 261




147|SequenceR|740|731|QTCTHAVFPR

>sp|KPRS1_ARCFU|RIBOSE-PHOSPHATE pyrophosphokinase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CTHAVFPR 10
CTHA+ R
Sbjct: 239 CTHAILAR 246


>sp|LEUC_METJA|ISOPROPYLMALATE/CITRAMALATE isomerase large subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 QTCTHAVF 8
TCTH F
Sbjct: 124 HTCTHGAF 131


>sp|HACA_METJA|METHANOGEN homoaconitase large subunit|Methanocaldococcus jannaschii (strain

Query: 1 QTCTHAVF 8
TCTH F
Sbjct: 119 HTCTHGAF 126


>sp|KPRS_METKA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanopyrus kandleri (strain AV19 /

Query: 3 CTHAVFPR 10
CTHA+ R
Sbjct: 242 CTHALLTR 249


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 3 CTHAVF 8
C HAVF
Sbjct: 583 CVHAVF 588


>sp|MSRA_SULAC|PEPTIDE methionine sulfoxide reductase MsrA|Sulfolobus acidocaldarius

Query: 3 CTHAVFPR 10
CT AVF R
Sbjct: 13 CTEAVFKR 20


>sp|Y783_METJA|UNCHARACTERIZED protein MJ0783|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CTHAVFPR 10
CTH +P+
Sbjct: 43 CTHIDYPK 50


>sp|Y433_ARCFU|PROBABLE S-adenosyl-L-methionine-binding protein AF_0433|Archaeoglobus

Query: 1 QTCTHAV 7
+TCTH +
Sbjct: 49 ETCTHLI 55




148|SequenceR|745|736|DSLLMQTCTH

>sp|DPOL3_SACS2|DNA polymerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DSLLMQTCT 9
D+LL+QT T
Sbjct: 81 DALLIQTST 89


>sp|HEM1_METB6|GLUTAMYL-TRNA reductase|Methanoregula boonei (strain DSM 21154

Query: 2 SLLMQTC 8
+LL+QTC
Sbjct: 45 ALLLQTC 51


>sp|HELS_METAR|ATP-DEPENDENT DNA helicase Hel308|Methanocella arvoryzae (strain DSM 22066

Query: 4 LMQTCT 9
LM+TCT
Sbjct: 617 LMETCT 622




149|SequenceR|750|741|RGMWMDSLLM

>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 RGMWMDSLL 9
RG+WMD L
Sbjct: 338 RGIWMDEAL 346


>sp|THI4_META3|THIAMINE thiazole synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 MWMDSL 8
MWMD+L
Sbjct: 26 MWMDNL 31


>sp|COBQ_THEKO|PROBABLE cobyric acid synthase|Thermococcus kodakarensis (strain ATCC

Query: 1 RGMWMD 6
RGMW++
Sbjct: 377 RGMWVE 382


>sp|MTAD_THEON|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus onnurineus (strain NA1)

Query: 2 GMWMDS 7
G+W+DS
Sbjct: 246 GVWLDS 251


>sp|MTAD_THEKO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GMWMDS 7
G+W+DS
Sbjct: 246 GVWLDS 251


>sp|Y4269_METAC|UPF0215 protein MA_4269|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GMWMDSLL 9
G WMD +L
Sbjct: 36 GDWMDGVL 43




150|SequenceR|755|746|KRMNLRGMWM

>sp|URED_CENSY|UREASE accessory protein UreD|Cenarchaeum symbiosum (strain A)

Query: 1 KRMNLRG 7
+RMNLRG
Sbjct: 189 RRMNLRG 195


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 1 KRMNLRGM 8
KRMNL+G+
Sbjct: 324 KRMNLKGV 331


>sp|SYE_THEPD|GLUTAMATE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 RMNLRGM 8
RMNL GM
Sbjct: 335 RMNLEGM 341


>sp|T2MT_METTF|TYPE II restriction enzyme MthTI|Methanothermobacter thermautotrophicus

Query: 3 MNLRGMWM 10
+ +RGMW+
Sbjct: 197 LRVRGMWI 204


>sp|RAD50_PYRHO|DNA double-strand break repair Rad50|Pyrococcus horikoshii (strain

Query: 1 KRMNLRGM 8
KRM LRG+
Sbjct: 51 KRMRLRGL 58




151|SequenceR|760|751|KYWSNKRMNL

>sp|DTDA_SACI7|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 YWSNKRM 8
YW+N+R+
Sbjct: 128 YWTNERI 134


>sp|DTDA_SACI6|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 YWSNKRM 8
YW+N+R+
Sbjct: 128 YWTNERI 134


>sp|DTDA_SACI4|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 YWSNKRM 8
YW+N+R+
Sbjct: 128 YWTNERI 134


>sp|DTDA_SACI3|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 YWSNKRM 8
YW+N+R+
Sbjct: 128 YWTNERI 134


>sp|DTDA_SACI2|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 YWSNKRM 8
YW+N+R+
Sbjct: 128 YWTNERI 134


>sp|DTDA_SACI1|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 YWSNKRM 8
YW+N+R+
Sbjct: 128 YWTNERI 134


>sp|NADK_THEGJ|NAD kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 YWSNKRMNL 10
YW ++RM L
Sbjct: 114 YWIDERMKL 122


>sp|MTNA_METST|PUTATIVE methylthioribose-1-phosphate isomerase|Methanosphaera stadtmanae

Query: 2 YWSNKRMNL 10
YW N R+ L
Sbjct: 6 YWENNRLFL 14


>sp|DTDA_SULTO|D-AMINOACYL-TRNA deacylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KYWSNKRM 8
+YW NK +
Sbjct: 127 EYWENKEL 134




152|SequenceR|765|756|ISLIVKYWSN

>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 4 IVKYWSN 10
IVKYW N
Sbjct: 209 IVKYWYN 215


>sp|COBS_HALWD|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ISLIVKYWSN 10
++L++K W++
Sbjct: 213 VALVIKQWAD 222


>sp|PDXT_CALMQ|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Caldivirga maquilingensis

Query: 4 IVKYWSN 10
IVKYW +
Sbjct: 148 IVKYWGS 154


>sp|HERA_PYRFU|DNA double-strand break repair helicase|Pyrococcus furiosus (strain

Query: 5 VKYWS 9
+KYWS
Sbjct: 275 IKYWS 279


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 SLIVKYWSN 10
S I+KYW +
Sbjct: 20 SEILKYWKD 28




153|SequenceR|770|761|APPVLISLIV

>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 2 PPVLISLIV 10
PP+L LIV
Sbjct: 874 PPILRELIV 882




154|SequenceR|775|766|ELLLIAPPVL

***** No hits found ******


155|SequenceR|780|771|AKTKYELLLI

>sp|AGLE_HALVD|GLYCOSYLTRANSFERASE AglE|Haloferax volcanii (strain ATCC 29605

Query: 2 KTKYELLLI 10
K+KYE+L++
Sbjct: 35 KSKYEVLVV 43


>sp|GGR_METPE|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 KTKYELLLI 10
KT+Y++L+I
Sbjct: 2 KTEYDILII 10




156|SequenceR|785|776|IHSMEAKTKY

>sp|PYRB_CALMQ|ASPARTATE carbamoyltransferase catalytic subunit|Caldivirga maquilingensis

Query: 2 HSMEAKTKY 10
HS+E KY
Sbjct: 106 HSLEGAAKY 114


>sp|NRPR_METMP|GLOBAL nitrogen regulator NrpR|Methanococcus maripaludis (strain DSM 14266

Query: 1 IHSMEAKTK 9
I SME KTK
Sbjct: 294 ISSMEKKTK 302


>sp|NADA_PYRHO|QUINOLINATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HSMEAKTKY 10
H +EAK KY
Sbjct: 93 HILEAKRKY 101


>sp|NADA_PYRFU|QUINOLINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HSMEAKTKY 10
H +EAK KY
Sbjct: 97 HILEAKKKY 105


>sp|Y3997_METAC|UPF0288 protein MA_3997|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 HSMEAKTK 9
HS+E KTK
Sbjct: 405 HSLELKTK 412


>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 1 IHSMEAKTKY 10
IHS++AK Y
Sbjct: 237 IHSVDAKLYY 246


>sp|NADA_PYRAB|QUINOLINATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 HSMEAKTKY 10
H +EAK KY
Sbjct: 93 HIIEAKRKY 101


>sp|NADA_THEKO|QUINOLINATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 HSMEAKTKY 10
H +EAK KY
Sbjct: 96 HIIEAKKKY 104




157|SequenceR|790|781|DQSQPIHSME

>sp|Y1607_METJA|UNCHARACTERIZED glycosyltransferase MJ1607|Methanocaldococcus jannaschii (strain

Query: 1 DQSQPIHSME 10
D S+ IH+ME
Sbjct: 133 DDSKAIHAME 142


>sp|CHEB1_METAC|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina

Query: 2 QSQPIHSM 9
+SQP+H++
Sbjct: 250 KSQPVHAV 257


>sp|CHEB1_METMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina mazei

Query: 2 QSQPIHSM 9
+SQP+H++
Sbjct: 258 KSQPVHAV 265


>sp|TRPG_METTH|ANTHRANILATE synthase component 2|Methanothermobacter thermautotrophicus (strain

Query: 1 DQSQPIHS 8
DQ +P+H
Sbjct: 104 DQGEPVHG 111




158|SequenceR|795|786|TMQHADQSQP

>sp|RNH2_CALMQ|RIBONUCLEASE HII|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 MQHADQSQP 10
+ HAD+S P
Sbjct: 131 LNHADESIP 139


>sp|RL1_METLZ|LARGE ribosomal subunit protein uL1|Methanocorpusculum labreanum

Query: 2 MQHADQSQP 10
++H D +QP
Sbjct: 33 LKHVDMAQP 41




159|SequenceR|800|791|ESDDMTMQHA

>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ESDDMTMQHA 10
+SD+MT Q A
Sbjct: 202 DSDEMTRQMA 211


>sp|RS10_META3|SMALL ribosomal subunit protein uS10|Methanococcus aeolicus (strain

Query: 1 ESDDMTMQH 9
E+D+ TM+H
Sbjct: 76 EADERTMKH 84


>sp|FAU1_NATPD|PROBABLE ribonuclease FAU-1|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ESDDMTMQHA 10
E DD+T+ H
Sbjct: 310 EGDDVTISHG 319


>sp|RS10_METVS|SMALL ribosomal subunit protein uS10|Methanococcus vannielii (strain

Query: 1 ESDDMTMQH 9
E+D+ TM+H
Sbjct: 76 EADERTMKH 84


>sp|RS10_METM5|SMALL ribosomal subunit protein uS10|Methanococcus maripaludis (strain

Query: 1 ESDDMTMQH 9
E+D+ TM+H
Sbjct: 76 EADERTMKH 84


>sp|RS10_METM6|SMALL ribosomal subunit protein uS10|Methanococcus maripaludis (strain

Query: 1 ESDDMTMQH 9
E+D+ TM+H
Sbjct: 76 EADERTMKH 84


>sp|RS10_METM7|SMALL ribosomal subunit protein uS10|Methanococcus maripaludis (strain

Query: 1 ESDDMTMQH 9
E+D+ TM+H
Sbjct: 76 EADERTMKH 84


>sp|RS10_METMP|SMALL ribosomal subunit protein uS10|Methanococcus maripaludis (strain

Query: 1 ESDDMTMQH 9
E+D+ TM+H
Sbjct: 76 EADERTMKH 84


>sp|Y1671_PYRHO|UPF0173 metal-dependent hydrolase PH1671|Pyrococcus horikoshii (strain ATCC

Query: 3 DDMTMQHA 10
DD+T+ HA
Sbjct: 130 DDVTIYHA 137




160|SequenceR|805|796|NQFNNESDDM

>sp|RL3_METS3|LARGE ribosomal subunit protein uL3|Methanobrevibacter smithii (strain

Query: 4 NNESDDM 10
NN+S+DM
Sbjct: 316 NNKSEDM 322


>sp|KAE1B_METM5|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 NQFNNES 7
N+FNNE+
Sbjct: 333 NEFNNEN 339




161|SequenceR|810|801|IEETINQFNN

>sp|SRP54_HALVD|SIGNAL recognition particle 54 kDa|Haloferax volcanii (strain ATCC 29605

Query: 1 IEETINQFNN 10
+E+TI QF N
Sbjct: 423 MEQTIKQFQN 432


>sp|DNLI_THEAC|DNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 EETINQF 8
EET NQF
Sbjct: 273 EETTNQF 279


>sp|HEM1_METM5|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C5 /

Query: 1 IEETINQFNN 10
+EE + +FNN
Sbjct: 310 VEEVLKEFNN 319


>sp|AROE_METVS|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus vannielii (strain ATCC 35089

Query: 1 IEETINQFNN 10
+EE I +FNN
Sbjct: 114 LEEEIGKFNN 123


>sp|UPPS_THEAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Thermoplasma

Query: 1 IEETINQFNN 10
+EET FNN
Sbjct: 140 VEETTKNFNN 149


>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EETINQFN 9
EET QFN
Sbjct: 85 EETFPQFN 92


>sp|Y264_METJA|UNCHARACTERIZED protein MJ0264|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IEETINQFN 9
I+ T+N+FN
Sbjct: 135 IQNTVNKFN 143


>sp|RPIA_METM5|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus maripaludis (strain C5 /

Query: 2 EETINQFNN 10
EET N NN
Sbjct: 202 EETENMLNN 210


>sp|HEM1_METMP|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IEETINQFNN 10
+EE + FNN
Sbjct: 310 VEEVLKDFNN 319


>sp|PFDA_METTH|PREFOLDIN subunit alpha|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 IEETINQFN 9
+EE +NQ N
Sbjct: 7 LEEIVNQLN 15




162|SequenceR|815|806|FVEMPIEETI

>sp|Y511_METAC|UPF0228 protein MA_0511|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FVEMPIEET 9
FV++P+EET
Sbjct: 24 FVKVPVEET 32


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FVEMPIEETI 10
F E+PI ET+
Sbjct: 334 FREVPISETL 343


>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 FVEMPIEETI 10
FVE P+E T+
Sbjct: 406 FVENPVEITV 415


>sp|HPCAL_NITMS|3-HYDROXYPROPIONATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 1 FVEMPIEETI 10
F + P+EETI
Sbjct: 634 FQDDPLEETI 643


>sp|END4_CENSY|PROBABLE endonuclease 4|Cenarchaeum symbiosum (strain A)

Query: 2 VEMPIEET 9
VE P++ET
Sbjct: 258 VETPVDET 265


>sp|MDH_METJA|L-MALATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FVEMPIEETI 10
F E+PI+E I
Sbjct: 202 FKELPIDEII 211


>sp|Y1589_METAC|UPF0228 protein MA_1589|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FVEMPIEET 9
FV+ P+E+T
Sbjct: 27 FVKTPVEDT 35


>sp|WTPA_ARCFU|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FVEMPIE 7
FVE+P+E
Sbjct: 247 FVELPVE 253


>sp|KPYK_THELN|PYRUVATE kinase|Thermococcus litoralis (strain ATCC 51850

Query: 2 VEMPIEE 8
VEMPIE+
Sbjct: 250 VEMPIEK 256


>sp|PRIS_HALSA|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 2 VEMPIEETI 10
VE+P E T+
Sbjct: 348 VELPTEHTV 356


>sp|PRIS_HALS3|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 2 VEMPIEETI 10
VE+P E T+
Sbjct: 348 VELPTEHTV 356


>sp|PFDA_METLZ|PREFOLDIN subunit alpha|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 VEMPIEETI 10
VE P+EE I
Sbjct: 94 VEKPVEEAI 102




163|SequenceR|820|811|IRVEKFVEMP

>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 IRVEKFVEMP 10
++VE F EMP
Sbjct: 417 VKVEGFSEMP 426


>sp|KAE1_THESM|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus sibiricus

Query: 2 RVEKFVEMP 10
R EK++E+P
Sbjct: 181 RGEKYIELP 189


>sp|ATGT_METST|TRNA-GUANINE(15) transglycosylase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 IRVEKFVEMP 10
+R+E +EMP
Sbjct: 265 LRLEDLIEMP 274


>sp|KAE1_THEKO|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus kodakarensis

Query: 1 IRVEKFVEMP 10
++ EK++E+P
Sbjct: 180 LKGEKYIELP 189


>sp|KAE1_PYRFU|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus furiosus

Query: 1 IRVEKFVEMP 10
++ EK++E+P
Sbjct: 180 LKGEKYIELP 189


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 RVEKFVEMP 10
RVEK VE P
Sbjct: 1177 RVEKGVEKP 1185


>sp|CAPPA_METKA|PHOSPHOENOLPYRUVATE carboxylase|Methanopyrus kandleri (strain AV19 /

Query: 1 IRVEKFVEMP 10
+RVEK E+P
Sbjct: 384 MRVEKLPELP 393


>sp|RS3_METLZ|SMALL ribosomal subunit protein uS3|Methanocorpusculum labreanum (strain

Query: 2 RVEKFVE 8
RV+KFVE
Sbjct: 142 RVQKFVE 148


>sp|EF1A_AERPE|ELONGATION factor 1-alpha|Aeropyrum pernix (strain ATCC 700893

Query: 3 VEKFVEMP 10
VEKF E+P
Sbjct: 398 VEKFSEIP 405


>sp|RS3_METAC|SMALL ribosomal subunit protein uS3|Methanosarcina acetivorans (strain

Query: 2 RVEKFVE 8
RVEKFV+
Sbjct: 142 RVEKFVD 148


>sp|Y1979_METAC|UPF0758 protein MA_1979|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RVEKFVEMP 10
R+E FVE P
Sbjct: 95 RLETFVEEP 103


>sp|KAE1_THEON|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus onnurineus

Query: 4 EKFVEMP 10
EK++E+P
Sbjct: 183 EKYIELP 189


>sp|PRIS_METM6|DNA primase small subunit PriS|Methanococcus maripaludis (strain C6 /

Query: 1 IRVEKFVEMP 10
I+V K++E+P
Sbjct: 26 IKVRKWLEIP 35


>sp|KAE1_PYRAB|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus abyssi (strain

Query: 4 EKFVEMP 10
EK++E+P
Sbjct: 183 EKYIELP 189


>sp|Y2791_METMA|UPF0758 protein MM_2791|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RVEKFVEMP 10
R+E FVE P
Sbjct: 95 RLETFVEEP 103


>sp|RS3_METBF|SMALL ribosomal subunit protein uS3|Methanosarcina barkeri (strain Fusaro

Query: 2 RVEKFVE 8
RVEKFV+
Sbjct: 142 RVEKFVD 148


>sp|PRIS_METM5|DNA primase small subunit PriS|Methanococcus maripaludis (strain C5 /

Query: 1 IRVEKFVEMP 10
I+V K++E+P
Sbjct: 26 IKVRKWLEIP 35


>sp|Y2303_METBF|UPF0758 protein Mbar_A2303|Methanosarcina barkeri (strain Fusaro /

Query: 2 RVEKFVEMP 10
R+E FVE P
Sbjct: 95 RLETFVEEP 103


>sp|RS3_METMA|SMALL ribosomal subunit protein uS3|Methanosarcina mazei (strain ATCC

Query: 2 RVEKFVE 8
RVEKFV+
Sbjct: 142 RVEKFVD 148


>sp|AROD_IGNH4|3-DEHYDROQUINATE dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 IRVEKFVEMP 10
+ V+KF E+P
Sbjct: 93 VEVKKFKELP 102


>sp|PCCA_HALMT|PROPIONYL-COA carboxylase, biotin carboxylase and|Haloferax mediterranei (strain

Query: 1 IRVEKFVEMP 10
+ VEK++E P
Sbjct: 197 VYVEKYLEAP 206




164|SequenceR|825|816|ENSDLIRVEK

>sp|LIPB2_PICTO|PROBABLE octanoyltransferase 2|Picrophilus torridus (strain ATCC 700027

Query: 2 NSDLIRVEK 10
N D+IRVE+
Sbjct: 81 NDDIIRVER 89


>sp|RAD50_HALVD|DNA double-strand break repair Rad50|Haloferax volcanii (strain ATCC

Query: 4 DLIRVEK 10
DL+RVEK
Sbjct: 863 DLVRVEK 869


>sp|KHSE_METAR|HOMOSERINE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 4 DLIRVEK 10
D+IRVEK
Sbjct: 31 DIIRVEK 37


>sp|THS_METJA|THERMOSOME subunit|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NSDLIRVEK 10
+ DLI+VEK
Sbjct: 193 DKDLIKVEK 201


>sp|THSB_ARCFU|THERMOSOME subunit beta|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NSDLIRVEK 10
N+D I++EK
Sbjct: 196 NTDYIKIEK 204


>sp|LONB_ARCFU|ARCHAEAL Lon protease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ENSDLIRVE 9
E SD++R+E
Sbjct: 381 EGSDIVRLE 389


>sp|TF2B_PYRAB|TRANSCRIPTION initiation factor IIB|Pyrococcus abyssi (strain GE5 /

Query: 1 ENSDLIRVEK 10
E SD+ RVEK
Sbjct: 174 EISDIARVEK 183


>sp|TF2B_PYRHO|TRANSCRIPTION initiation factor IIB|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ENSDLIRVEK 10
E SD+ RVEK
Sbjct: 174 EISDIARVEK 183


>sp|PRIS_PYRAR|DNA primase small subunit PriS|Pyrobaculum arsenaticum (strain DSM

Query: 1 ENSDLIRVE 9
EN D +RVE
Sbjct: 205 ENPDTLRVE 213


>sp|ADEC_METMA|ADENINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ENSDLIRVEK 10
EN +IRVE+
Sbjct: 24 ENGKIIRVEE 33


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 2 NSDLIRVE 9
N D+IR+E
Sbjct: 373 NGDVIRIE 380


>sp|THS_METTL|CHAPERONIN subunit|Methanothermococcus thermolithotrophicus

Query: 2 NSDLIRVEK 10
+ DLI++EK
Sbjct: 191 DKDLIKIEK 199


>sp|THS_METMP|CHAPERONIN subunit|Methanococcus maripaludis (strain DSM 14266

Query: 2 NSDLIRVEK 10
+ DLI++EK
Sbjct: 189 DKDLIKIEK 197




165|SequenceR|830|821|MENKGENSDL

>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 MENKGENSDL 10
+ NKG N+D
Sbjct: 52 LSNKGANADF 61


>sp|Y3401_METJA|UNCHARACTERIZED protein MJECS01|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MENKGENSDL 10
+EN GE+ DL
Sbjct: 230 LENYGEHDDL 239


>sp|GATD_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina barkeri (strain Fusaro

Query: 1 MENKGENSD 9
+EN GEN++
Sbjct: 52 LENNGENTN 60


>sp|IF2G_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 4 KGENSDL 10
KGEN DL
Sbjct: 74 KGENCDL 80




166|SequenceR|835|826|KMQIEMENKG

>sp|AROE_METAR|SHIKIMATE dehydrogenase (NADP(+))|Methanocella arvoryzae (strain DSM 22066

Query: 4 IEMENKG 10
+E+ENKG
Sbjct: 112 VELENKG 118


>sp|FENR1_SULAC|FERREDOXIN--NADP reductase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KMQIEMENKG 10
K +IE ENKG
Sbjct: 124 KGEIEYENKG 133


>sp|GFCR_PICTO|TRANSCRIPTIONAL regulator GfcR|Picrophilus torridus (strain ATCC 700027

Query: 4 IEMENKG 10
IEM+NKG
Sbjct: 12 IEMKNKG 18




167|SequenceR|840|831|PLKKSKMQIE

>sp|AROE_NITMS|SHIKIMATE dehydrogenase (NADP(+))|Nitrosopumilus maritimus (strain SCM1)

Query: 1 PLKKSKMQIE 10
PLKK ++IE
Sbjct: 109 PLKKRNIEIE 118


>sp|HFLX_SACS2|GTPASE HflX|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 KKSKMQIE 10
K++KMQIE
Sbjct: 101 KEAKMQIE 108


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 PLKKSKMQIE 10
PL++S +QI+
Sbjct: 151 PLRESALQIQ 160




168|SequenceR|845|836|FKRTIPLKKS

>sp|PSB2_DESA1|PROTEASOME subunit beta 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 KRTIPLKKS 10
+ TIPLKK+
Sbjct: 194 EETIPLKKT 202


>sp|DNAK_METBU|CHAPERONE protein DnaK|Methanococcoides burtonii (strain DSM 6242

Query: 4 TIPLKKS 10
TIP+KKS
Sbjct: 391 TIPVKKS 397




169|SequenceR|850|841|HYFAYFKRTI

>sp|HCP_METJA|HYDROXYLAMINE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HYFAYFKR 8
HY+ +FK+
Sbjct: 264 HYYPFFKK 271


>sp|GCST_PYRHO|PROBABLE aminomethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YFAYFKRTI 10
+F Y KRTI
Sbjct: 123 WFTYLKRTI 131


>sp|AROA_THEVO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 YFAYFKRTI 10
YFA +RTI
Sbjct: 199 YFANIERTI 207


>sp|GCST_PYRFU|PROBABLE aminomethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YFAYFKRTI 10
+F Y K+TI
Sbjct: 123 WFTYLKKTI 131


>sp|GCST_PYRAB|PROBABLE aminomethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 YFAYFKRTI 10
+F Y K+TI
Sbjct: 123 WFTYLKKTI 131




170|SequenceR|855|846|KVIPAHYFAY

>sp|RNZ_IGNH4|RIBONUCLEASE Z|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 KVIPAHYFAY 10
+ +PAHYF Y
Sbjct: 20 RALPAHYFEY 29


>sp|AROD_METS5|3-DEHYDROQUINATE dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 KVIPAHYF 8
KV+ AHYF
Sbjct: 103 KVVSAHYF 110


>sp|HCP_METJA|HYDROXYLAMINE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KVIPAHYFAY 10
+++PAHY+ +
Sbjct: 259 EMLPAHYYPF 268


>sp|HCP_METVS|HYDROXYLAMINE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 KVIPAHYF 8
+++PAHY+
Sbjct: 263 EMLPAHYY 270


>sp|CYAS_METBU|CYSTEATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 KVIPAHYF 8
K +P HYF
Sbjct: 221 KSLPQHYF 228


>sp|Y055_KORCO|UPF0173 metal-dependent hydrolase Kcr_0055|Korarchaeum cryptofilum (strain

Query: 1 KVIPAHY 7
KVIP HY
Sbjct: 179 KVIPMHY 185


>sp|Y1902_METTH|UPF0173 metal-dependent hydrolase MTH_1902|Methanothermobacter

Query: 1 KVIPAHY 7
KV+P HY
Sbjct: 187 KVLPMHY 193


>sp|TOP6B_METAC|TYPE 2 DNA topoisomerase 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 IPAHYF 8
+PAHY+
Sbjct: 142 VPAHYY 147


>sp|CYAS_METB6|CYSTEATE synthase|Methanoregula boonei (strain DSM 21154

Query: 3 IPAHYF 8
IP HYF
Sbjct: 223 IPDHYF 228


>sp|ARLY_SULAC|ARGININOSUCCINATE lyase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 AHYFAY 10
AHYF Y
Sbjct: 155 AHYFMY 160


>sp|FTTA_CENSY|TRANSCRIPTION termination factor FttA|Cenarchaeum symbiosum (strain A)

Query: 3 IPAHY 7
IPAHY
Sbjct: 631 IPAHY 635


>sp|Y803_PYRIL|UPF0173 metal-dependent hydrolase Pisl_0803|Pyrobaculum islandicum (strain

Query: 1 KVIPAHY 7
KV+P HY
Sbjct: 183 KVVPMHY 189


>sp|LEUD_SACS2|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 VIPAHYFAY 10
+IPA Y Y
Sbjct: 19 IIPARYLKY 27


>sp|LEUD_SACI7|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 2 VIPAHYFAY 10
+IPA Y Y
Sbjct: 19 IIPARYLKY 27


>sp|LEUD_SACI2|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 2 VIPAHYFAY 10
+IPA Y Y
Sbjct: 19 IIPARYLKY 27


>sp|PRIS_PYRAR|DNA primase small subunit PriS|Pyrobaculum arsenaticum (strain DSM

Query: 1 KVIPAHYFAY 10
K++PAH Y
Sbjct: 292 KILPAHVAIY 301


>sp|ARLY_SULTO|ARGININOSUCCINATE lyase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 AHYFAY 10
AHYF Y
Sbjct: 155 AHYFLY 160


>sp|LEUD_SULTO|3-ISOPROPYLMALATE dehydratase small subunit|Sulfurisphaera tokodaii (strain DSM

Query: 2 VIPAHYFAY 10
+IPA Y Y
Sbjct: 19 IIPARYLKY 27


>sp|LEUD_SACI6|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain M.16.4

Query: 2 VIPAHYFAY 10
+IPA Y Y
Sbjct: 19 IIPARYLKY 27


>sp|LEUD_SACI4|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 2 VIPAHYFAY 10
+IPA Y Y
Sbjct: 19 IIPARYLKY 27


>sp|LEUD_SACI1|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 2 VIPAHYFAY 10
+IPA Y Y
Sbjct: 19 IIPARYLKY 27


>sp|LEUD_SACI3|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 2 VIPAHYFAY 10
+IPA Y Y
Sbjct: 19 IIPARYLKY 27


>sp|Y942_METJA|PROBABLE ATP-dependent helicase MJ0942|Methanocaldococcus jannaschii

Query: 2 VIPAHYFA 9
+IPA YFA
Sbjct: 52 LIPALYFA 59


>sp|Y3716_METBF|UPF0173 metal-dependent hydrolase Mbar_A3716|Methanosarcina barkeri (strain

Query: 2 VIPAHYFAY 10
VIP HY +
Sbjct: 189 VIPMHYSTF 197


>sp|LEUD_METJA|ISOPROPYLMALATE/CITRAMALATE isomerase small subunit|Methanocaldococcus jannaschii (strain

Query: 2 VIPAHYFAY 10
++PA Y Y
Sbjct: 21 ILPARYLVY 29


>sp|CSX1_SACS2|CRISPR system endoribonuclease Csx1|Saccharolobus solfataricus (strain

Query: 4 PAHYFAY 10
P HYF Y
Sbjct: 99 PDHYFTY 105


>sp|Y1314_THEON|UPF0173 metal-dependent hydrolase TON_1314|Thermococcus onnurineus (strain

Query: 1 KVIPAHYFAY 10
KV+P HY +
Sbjct: 184 KVVPMHYNTW 193


>sp|Y141_THEKO|UPF0173 metal-dependent hydrolase TK0141|Thermococcus kodakarensis (strain

Query: 1 KVIPAHYFAY 10
KV+P HY +
Sbjct: 184 KVVPMHYNTW 193


>sp|Y1671_PYRHO|UPF0173 metal-dependent hydrolase PH1671|Pyrococcus horikoshii (strain ATCC

Query: 1 KVIPAHYFAY 10
KV+P HY +
Sbjct: 185 KVVPMHYNTW 194


>sp|CAS1A_METRM|CRISPR-ASSOCIATED protein Cas1 1|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 3 IPAHYFAY 10
IP H+F Y
Sbjct: 61 IPIHFFNY 68


>sp|METAA_METAX|HOMOSERINE O-acetyltransferase|Methanomethylophilus alvi (strain Mx1201)

Query: 3 IPAHYF 8
IP HYF
Sbjct: 259 IPYHYF 264


>sp|AROD_SACS2|3-DEHYDROQUINATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KVIPAHYFAY 10
+++ HYF Y
Sbjct: 109 RIVSVHYFNY 118


>sp|Y120_PYRHO|UPF0173 protein PH0120|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VIPAHYFAY 10
V+P HY Y
Sbjct: 170 VVPMHYGTY 178


>sp|CAS1_THEKO|CRISPR-ASSOCIATED endonuclease Cas1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KVIPAHYFAY 10
K IP H+F +
Sbjct: 59 KGIPVHFFNH 68




171|SequenceR|860|851|TNFWFKVIPA

>sp|MANB_METJA|PHOSPHOMANNOMUTASE jannaschii (strain ATCC 43067

Query: 2 NFWFKVIPA 10
NFWF + P+
Sbjct: 405 NFWFNLRPS 413


>sp|RL10E_THEVO|LARGE ribosomal subunit protein uL16|Thermoplasma volcanium (strain

Query: 2 NFWFKVIP 9
NF+ KV+P
Sbjct: 81 NFYLKVVP 88


>sp|ABLB_METMP|BETA-LYSINE N(6)-acetyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 2 NFWFKV 7
NFW+K+
Sbjct: 267 NFWYKL 272


>sp|TYW3_AERPE|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 TNFWFKV 7
TN W KV
Sbjct: 82 TNLWLKV 88


>sp|TRPB_DESA1|TRYPTOPHAN synthase beta chain|Desulfurococcus amylolyticus (strain DSM

Query: 2 NFWFKVIP 9
++W+ ++P
Sbjct: 14 SYWYNIVP 21


>sp|ARTA_HALVD|ARCHAEOSORTASE A|Haloferax volcanii (strain ATCC 29605

Query: 3 FWFKVIP 9
FW ++IP
Sbjct: 45 FWLQLIP 51


>sp|EPPA_METMP|PREPILIN peptidase EppA|Methanococcus maripaludis (strain DSM 14266

Query: 2 NFWFKVIPA 10
N+W +IP+
Sbjct: 123 NYWKDIIPS 131




172|SequenceR|865|856|GLYALTNFWF

>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 2 LYALTNFW 9
LYA+T +W
Sbjct: 820 LYAMTTYW 827


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 2 LYALTNFWF 10
LYAL FW
Sbjct: 397 LYALLGFWL 405


>sp|SPCS_METJA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GLYALTNFWF 10
G YA+ NF++
Sbjct: 247 GAYAIQNFYY 256


>sp|GLMU_METVS|BIFUNCTIONAL protein GlmU|Methanococcus vannielii (strain ATCC 35089

Query: 1 GLYALTNFWF 10
G+Y L NF F
Sbjct: 164 GIYKLENFVF 173


>sp|ACDE_METSH|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanothrix

Query: 1 GLYALTNF 8
GL+ LTNF
Sbjct: 98 GLHPLTNF 105


>sp|Y1216_PYRHO|PROBABLE ABC transporter permease protein|Pyrococcus horikoshii (strain ATCC

Query: 1 GLYALTNFW 9
G+Y TN W
Sbjct: 198 GIYQFTNIW 206


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 LYALTNFW 9
LY TN W
Sbjct: 224 LYGATNVW 231


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 LYALTNFWF 10
+Y +TN W
Sbjct: 235 VYGVTNMWL 243


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LYALTNFWF 10
+Y +TN W
Sbjct: 235 VYGVTNMWL 243


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LYALTNFWF 10
+Y +TN W
Sbjct: 235 VYGVTNMWL 243


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 LYALTNFW 9
+Y +TN W
Sbjct: 235 VYGVTNMW 242


>sp|Y1305_PYRAB|UPF0056 membrane protein PYRAB13050|Pyrococcus abyssi (strain GE5 /

Query: 1 GLYALTN 7
GL+A+TN
Sbjct: 14 GLFAITN 20


>sp|SYL_THEVO|LEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LYALTNFW 9
L+ +TN W
Sbjct: 243 LFGVTNIW 250


>sp|HYD1G_PYRFU|SULFHYDROGENASE 1 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LYALTNFW 9
LYA+ N W
Sbjct: 140 LYAMDNRW 147


>sp|WTPB_METJA|MOLYBDATE/TUNGSTATE transport system permease protein|Methanocaldococcus jannaschii

Query: 1 GLYALTNFW 9
G Y + NFW
Sbjct: 114 GRYVVDNFW 122


>sp|RL3_METB6|LARGE ribosomal subunit protein uL3|Methanoregula boonei (strain DSM

Query: 1 GLYALTNFW 9
G +ALT W
Sbjct: 94 GKHALTEIW 102




173|SequenceR|870|861|YLMLFGLYAL

>sp|IORB_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorB|Archaeoglobus fulgidus (strain ATCC

Query: 3 MLFGLYAL 10
MLFG Y++
Sbjct: 152 MLFGYYSM 159


>sp|EF1B_METJA|ELONGATION factor 1-beta|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 MLFGLYAL 10
+ FGLYA+
Sbjct: 45 LAFGLYAI 52




174|SequenceR|875|866|LVVFTYLMLF

***** No hits found ******


175|SequenceR|880|871|QEMQVLVVFT

>sp|AATB_PYRAB|A-TYPE ATP synthase subunit B|Pyrococcus abyssi (strain GE5 /

Query: 2 EMQVLVVFT 10
+MQVLV+ T
Sbjct: 240 DMQVLVILT 248


>sp|AATB_THEGJ|A-TYPE ATP synthase subunit B|Thermococcus gammatolerans (strain DSM 15229

Query: 2 EMQVLVVFT 10
+MQVLV+ T
Sbjct: 241 DMQVLVILT 249


>sp|AATB_DESSY|A-TYPE ATP synthase subunit B|Desulfurococcus sp. (strain SY)

Query: 2 EMQVLVVFT 10
+MQVLV+ T
Sbjct: 241 DMQVLVILT 249


>sp|AATB_THESI|A-TYPE ATP synthase subunit B|Thermococcus sp. (strain KI)

Query: 2 EMQVLVVFT 10
+MQVLV+ T
Sbjct: 241 DMQVLVILT 249


>sp|AATB_THEKO|A-TYPE ATP synthase subunit B|Thermococcus kodakarensis (strain ATCC

Query: 2 EMQVLVVFT 10
+MQVLV+ T
Sbjct: 243 DMQVLVILT 251


>sp|AATB_THEVO|A-TYPE ATP synthase subunit B|Thermoplasma volcanium (strain ATCC 51530

Query: 1 QEMQVLVVFT 10
+EM +LV+ T
Sbjct: 240 KEMHILVILT 249


>sp|AATB_THEON|A-TYPE ATP synthase subunit B|Thermococcus onnurineus (strain NA1)

Query: 2 EMQVLVVFT 10
+MQVLV+ T
Sbjct: 243 DMQVLVILT 251


>sp|AATB_METTP|A-TYPE ATP synthase subunit B|Methanothrix thermoacetophila (strain DSM

Query: 2 EMQVLVVFT 10
+M VLV++T
Sbjct: 239 DMHVLVIYT 247


>sp|AATB_METAR|A-TYPE ATP synthase subunit B|Methanocella arvoryzae (strain DSM 22066

Query: 1 QEMQVLVVFT 10
+M VLV++T
Sbjct: 237 HDMHVLVIYT 246


>sp|AATB_METS3|A-TYPE ATP synthase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 3 MQVLVVFT 10
MQVLV+ T
Sbjct: 246 MQVLVILT 253




176|SequenceR|885|876|QVSPLQEMQV

>sp|NTPPA_METBU|DTTP/UTP pyrophosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 3 SPLQEMQV 10
+PLQEM V
Sbjct: 35 TPLQEMNV 42




177|SequenceR|890|881|IVIWEQVSPL

>sp|ASOR_PYRFU|ALIPHATIC sulfonate oxidoreductase, WOR-like subunit|Pyrococcus furiosus

Query: 4 WEQVSPL 10
WE+V PL
Sbjct: 50 WEKVDPL 56


>sp|PPM_THEKO|PHOSPHOPENTOMUTASE kodakarensis (strain ATCC BAA-918

Query: 3 IWEQVSP 9
+WE+V+P
Sbjct: 13 LWEKVTP 19


>sp|Y706_METBF|UPF0288 protein Mbar_A0706|Methanosarcina barkeri (strain Fusaro /

Query: 1 IVIWEQVS 8
I+ WEQ+S
Sbjct: 184 IIEWEQIS 191


>sp|ALF1_PYRAB|FRUCTOSE-BISPHOSPHATE aldolase class 1|Pyrococcus abyssi (strain GE5 /

Query: 3 IWEQVSP 9
+WE V+P
Sbjct: 42 VWEHVNP 48


>sp|ALF1_THEKO|FRUCTOSE-BISPHOSPHATE aldolase class 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 IWEQVSP 9
+WE V+P
Sbjct: 42 VWEHVNP 48


>sp|ALF1_PYRHO|FRUCTOSE-BISPHOSPHATE aldolase class 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 IWEQVSP 9
+WE V+P
Sbjct: 42 VWEHVNP 48


>sp|KAD_THEGJ|ADENYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 IWEQVSPL 10
+W+++ PL
Sbjct: 202 VWKRIKPL 209


>sp|KAD_THEKO|ADENYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 IWEQVSPL 10
+W+++ PL
Sbjct: 202 VWKRIQPL 209


>sp|ALF1_PYRFU|FRUCTOSE-BISPHOSPHATE aldolase class 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 IWEQVSP 9
+WE V+P
Sbjct: 42 VWEHVNP 48


>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IVIWEQVS 8
+ +WEQ++
Sbjct: 517 LTVWEQIN 524


>sp|PIWI_ARCFU|PIWI protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VIWEQVSPL 10
++W ++SP+
Sbjct: 208 MLWNEISPI 216


>sp|Y2151_THEKO|PUTATIVE transcriptional regulatory protein TK2151|Thermococcus

Query: 1 IVIWEQVS 8
+++WEQ++
Sbjct: 54 LLLWEQIN 61




178|SequenceR|895|886|TFIYAIVIWE

>sp|MCH_HALMA|MESACONYL-COA hydratase|Haloarcula marismortui (strain ATCC 43049

Query: 4 YAIVIWE 10
Y IV WE
Sbjct: 146 YGIVTWE 152


>sp|MCH_HALHT|MESACONYL-COA hydratase|Haloarcula hispanica (strain ATCC 33960

Query: 4 YAIVIWE 10
Y IV WE
Sbjct: 146 YGIVTWE 152


>sp|Y2239_ARCFU|UNCHARACTERIZED protein AF_2239|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FIYAIVIWE 10
F Y++ IWE
Sbjct: 273 FYYSMKIWE 281


>sp|CSA1_SACS2|CRISPR-ASSOCIATED exonuclease Csa1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 IYAIVIWE 10
IYA V+W+
Sbjct: 126 IYAKVLWD 133




179|SequenceR|900|891|KEIAYTFIYA

>sp|SYY_METS3|TYROSINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 EIAYTFIY 9
EIA TF+Y
Sbjct: 252 EIAETFVY 259


>sp|GAPN_THETE|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Thermoproteus tenax

Query: 2 EIAYTFIYA 10
+I Y+FIY
Sbjct: 177 KITYSFIYG 185


>sp|RS24_NANEQ|SMALL ribosomal subunit protein eS24|Nanoarchaeum equitans (strain

Query: 3 IAYTFIYA 10
+ Y+FIYA
Sbjct: 63 LPYSFIYA 70


>sp|Y420_ARCFU|UPF0248 protein AF_0420|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KEIAYTFIY 9
KEI + FIY
Sbjct: 35 KEIGHMFIY 43




180|SequenceR|905|896|FIERVKEIAY

>sp|AATB2_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain

Query: 1 FIERVKEIAY 10
F+ER KEI++
Sbjct: 23 FVERPKEISF 32


>sp|SYC_PYRHO|CYSTEINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FIERVKEIAY 10
FIER+KE Y
Sbjct: 125 FIERLKEKGY 134


>sp|Y047_METJA|PROBABLE RNase MJ4|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FIERVKEIAY 10
FIE++KEI +
Sbjct: 210 FIEKIKEILF 219


>sp|END4_HALMA|PROBABLE endonuclease 4|Haloarcula marismortui (strain ATCC 43049

Query: 2 IERVKEI 8
IERVKE+
Sbjct: 268 IERVKEL 274


>sp|MTBC3_METMA|DIMETHYLAMINE corrinoid protein 3|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FIERVKEI 8
FIE+ KE+
Sbjct: 88 FIEKAKEV 95


>sp|RADB_METJA|DNA repair and recombination protein|Methanocaldococcus jannaschii

Query: 2 IERVKEIA 9
IER+K+IA
Sbjct: 54 IERIKQIA 61


>sp|AATB_PICTO|A-TYPE ATP synthase subunit B|Picrophilus torridus (strain ATCC 700027

Query: 1 FIERVKEIAY 10
F+E VK+ +Y
Sbjct: 18 FVEDVKDTSY 27


>sp|OGG1_PICTO|8-OXOGUANINE DNA glycosylase/AP lyase|Picrophilus torridus (strain ATCC 700027

Query: 1 FIERVKEIAY 10
IERVK I Y
Sbjct: 122 LIERVKGIGY 131


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 FIERVKEI 8
F+ERVK I
Sbjct: 236 FVERVKSI 243


>sp|PUR2_METM5|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C5 /

Query: 2 IERVKEIA 9
IERVK++A
Sbjct: 436 IERVKQLA 443


>sp|Y1629_METJA|UPF0282 protein MJ1629|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FIERVKEIA 9
F+E VK+IA
Sbjct: 123 FLESVKDIA 131


>sp|MTBC_METBA|DIMETHYLAMINE corrinoid protein|Methanosarcina barkeri

Query: 1 FIERVKEI 8
FIE+ KE+
Sbjct: 134 FIEKAKEV 141


>sp|PGP_METMA|PHOSPHOGLYCOLATE phosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 ERVKEIA 9
ERVKE+A
Sbjct: 195 ERVKEVA 201


>sp|MTTC_METBA|TRIMETHYLAMINE corrinoid protein|Methanosarcina barkeri

Query: 1 FIERVKEI 8
F+E+VKE+
Sbjct: 137 FVEKVKEL 144


>sp|MTTC2_METMA|TRIMETHYLAMINE corrinoid protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FIERVKEI 8
F+E+VKE+
Sbjct: 137 FVEKVKEL 144


>sp|GSA_SULAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FIERVKEIA 9
F+ER++EI
Sbjct: 213 FLERLREIT 221


>sp|SYM_AERPE|METHIONINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 FIERVKEIAY 10
F+ERV+ A+
Sbjct: 421 FVERVRRAAW 430


>sp|GYRB_ARCFU|DNA gyrase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ERVKEIAY 10
+R+KE+AY
Sbjct: 195 QRLKELAY 202


>sp|Y1311_METJA|UNCHARACTERIZED protein MJ1311|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IERVKEIAY 10
+E++KEI Y
Sbjct: 245 LEKLKEIGY 253


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 IERVKEIAY 10
IE++KE+ Y
Sbjct: 862 IEKLKELGY 870


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 3 ERVKEIAY 10
+RVK IAY
Sbjct: 384 DRVKSIAY 391


>sp|TRUB_AERPE|PROBABLE tRNA pseudouridine synthase B|Aeropyrum pernix (strain ATCC

Query: 1 FIERVKEI 8
FIE+VK I
Sbjct: 15 FIEKVKSI 22


>sp|Y960_SACI1|UPF0215 protein YN1551_0960|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 ERVKEIAY 10
ERV+EI Y
Sbjct: 108 ERVREILY 115


>sp|Y1993_SACI2|UPF0215 protein LS215_1993|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 ERVKEIAY 10
ERV+EI Y
Sbjct: 108 ERVREILY 115


>sp|Y1960_SACI7|UPF0215 protein YG5714_1960|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 ERVKEIAY 10
ERV+EI Y
Sbjct: 108 ERVREILY 115


>sp|SYM_METMP|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 ERVKEIAY 10
ER+KE+ Y
Sbjct: 462 ERLKEVMY 469


>sp|Y2097_ARCFU|PUTATIVE nickel insertion protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 RVKEIAY 10
RVKE++Y
Sbjct: 210 RVKEVSY 216


>sp|Y1961_SACI3|UPF0215 protein M1627_1961|Saccharolobus islandicus (strain M.16.27)

Query: 3 ERVKEIAY 10
ERV+EI Y
Sbjct: 108 ERVREILY 115


>sp|Y1891_SACI6|UPF0215 protein M164_1891|Saccharolobus islandicus (strain M.16.4 /

Query: 3 ERVKEIAY 10
ERV+EI Y
Sbjct: 108 ERVREILY 115


>sp|Y1884_SACI4|UPF0215 protein M1425_1884|Saccharolobus islandicus (strain M.14.25 /

Query: 3 ERVKEIAY 10
ERV+EI Y
Sbjct: 108 ERVREILY 115


>sp|SYM_METM5|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 ERVKEIAY 10
ER+KE+ Y
Sbjct: 462 ERLKEVMY 469




181|SequenceR|910|901|GAESMFIERV

>sp|Y074_METJA|UNCHARACTERIZED ATP-binding protein MJ0074|Methanocaldococcus jannaschii (strain

Query: 2 AESMFIERV 10
++S+FIERV
Sbjct: 182 SDSLFIERV 190


>sp|Y1010_METJA|UNCHARACTERIZED ATP-binding protein MJ1010|Methanocaldococcus jannaschii (strain

Query: 2 AESMFIERV 10
++S+FIERV
Sbjct: 200 SDSLFIERV 208


>sp|Y632_METJA|UNCHARACTERIZED ATP-binding protein MJ0632|Methanocaldococcus jannaschii (strain

Query: 2 AESMFIERV 10
++S+FIERV
Sbjct: 197 SDSLFIERV 205


>sp|Y1659_METJA|UNCHARACTERIZED ATP-binding protein MJ1659|Methanocaldococcus jannaschii (strain

Query: 2 AESMFIERV 10
++S+FIERV
Sbjct: 196 SDSLFIERV 204


>sp|Y1301_METJA|UNCHARACTERIZED ATP-binding protein MJ1301|Methanocaldococcus jannaschii (strain

Query: 2 AESMFIERV 10
++S+FIERV
Sbjct: 189 SDSLFIERV 197


>sp|Y1731_ARCFU|UNCHARACTERIZED protein AF_1731|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GAESMFIERV 10
GA+ F+ERV
Sbjct: 22 GADEKFLERV 31


>sp|Y948_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB09480|Pyrococcus abyssi (strain GE5 /

Query: 2 AESMFIERV 10
++S+FIERV
Sbjct: 181 SDSLFIERV 189


>sp|HIS8_METMA|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GAESMFIER 9
GAE +FI R
Sbjct: 137 GAEPVFIRR 145


>sp|DPDH_PYRIL|D-PROLINE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 AESMFIE 8
A+SMFIE
Sbjct: 245 AQSMFIE 251


>sp|Y1078_METJA|UPF0104 membrane protein MJ1078|Methanocaldococcus jannaschii (strain

Query: 1 GAESMFIERV 10
G ++FIERV
Sbjct: 31 GVGTVFIERV 40


>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 1 GAESMFIERV 10
G ES+FI+++
Sbjct: 570 GKESLFIDKL 579


>sp|Y1200_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB12000|Pyrococcus abyssi (strain GE5 /

Query: 2 AESMFIERV 10
++S+F+ERV
Sbjct: 164 SDSLFLERV 172


>sp|TRM56_CENSY|TRNA (cytidine(56)-2'-O)-methyltransferase|Cenarchaeum symbiosum

Query: 1 GAESMFIERV 10
GAE +F+E V
Sbjct: 30 GAERIFMEEV 39




182|SequenceR|915|906|KQNVKGAESM

>sp|CCA_NANEQ|CCA-ADDING enzyme|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 KQNVKGAES 9
K+N+KG E+
Sbjct: 134 KKNIKGLEN 142




183|SequenceR|920|911|FWVKIKQNVK

>sp|DNLI_AERPE|DNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 FWVKIKQNVK 10
WVK+K++ K
Sbjct: 434 LWVKLKRDYK 443


>sp|DNLI_METPE|DNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 WVKIKQNVK 10
WVKIK V+
Sbjct: 412 WVKIKPEVE 420


>sp|PURQ_METMP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanococcus maripaludis (strain DSM 14266

Query: 2 WVKIKQN 8
WV IK+N
Sbjct: 136 WVHIKEN 142


>sp|PURQ_METM7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanococcus maripaludis (strain C7 /

Query: 2 WVKIKQN 8
WV IK+N
Sbjct: 136 WVHIKEN 142


>sp|DNLI_METMJ|DNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FWVKIKQNVK 10
WVK+K V+
Sbjct: 408 LWVKVKPGVE 417


>sp|Y1515_METJA|UNCHARACTERIZED protein MJ1515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WVKIKQNV 9
W KIK N+
Sbjct: 63 WTKIKSNI 70


>sp|DNLI_METLZ|DNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 FWVKIKQNV 9
W+KIK V
Sbjct: 408 LWIKIKPEV 416


>sp|G1PDH_HALWD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Haloquadratum walsbyi (strain DSM 16790

Query: 2 WVKIKQNV 9
W+K+ +NV
Sbjct: 7 WIKLPRNV 14


>sp|G1PDH_HALLT|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Halorubrum lacusprofundi (strain ATCC

Query: 2 WVKIKQNV 9
W+K+ +NV
Sbjct: 7 WIKLPRNV 14


>sp|DNLI_METB6|DNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 WVKIKQNV 9
W+KIK V
Sbjct: 409 WIKIKPEV 416


>sp|PURQ_METM5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanococcus maripaludis (strain C5 /

Query: 2 WVKIKQN 8
WV +K+N
Sbjct: 133 WVHVKEN 139


>sp|G1PDH_PYRAB|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus abyssi (strain GE5 /

Query: 2 WVKIKQNVK 10
W KIK+ +K
Sbjct: 282 WRKIKETLK 290


>sp|DNLI1_KORCO|DNA ligase 1|Korarchaeum cryptofilum (strain OPF8)

Query: 1 FWVKIKQ 7
+W+K+K+
Sbjct: 401 YWLKVKE 407


>sp|Y1318_METJA|UNCHARACTERIZED protein MJ1318|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FWVKIKQN 8
+WV +K+N
Sbjct: 395 WWVSLKEN 402




184|SequenceR|925|916|NFYDSFWVKI

>sp|Y1266_METJA|UNCHARACTERIZED protein MJ1266|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NFYDSFWV 8
N YD+FWV
Sbjct: 325 NVYDAFWV 332


>sp|SYP_SULTO|PROLINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FYDSFWVK 9
F +SFWVK
Sbjct: 118 FMESFWVK 125


>sp|AROC_PYRAR|CHORISMATE synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 NFYDSFWVK 9
++YD W+K
Sbjct: 91 SYYDELWMK 99


>sp|AROC_PYRAE|CHORISMATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 NFYDSFWVK 9
++YD W+K
Sbjct: 91 SYYDELWMK 99


>sp|GATD_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus solfataricus (strain ATCC

Query: 1 NFYDSFWVKI 10
N FWVKI
Sbjct: 148 NMKPEFWVKI 157


>sp|GATD_METS5|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Metallosphaera sedula (strain ATCC 51363

Query: 1 NFYDSFWVKI 10
N FWVKI
Sbjct: 144 NMKPEFWVKI 153


>sp|SYC_METAC|CYSTEINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 FYDSFWVKI 10
+YDS W KI
Sbjct: 197 YYDSPWGKI 205


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 FYDSFWVK 9
+Y+ +WV+
Sbjct: 813 YYEDYWVR 820


>sp|COFC_METST|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 NFYDSFWVKI 10
N YDSF++ +
Sbjct: 172 NIYDSFYLSL 181


>sp|SYFA_AERPE|PHENYLALANINE--TRNA ligase alpha subunit|Aeropyrum pernix (strain ATCC 700893

Query: 3 YDSFWVK 9
+DS W+K
Sbjct: 282 HDSLWIK 288


>sp|MCRX_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 FYDSFWV 8
FYD W+
Sbjct: 316 FYDQVWL 322


>sp|COFC_METIM|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocaldococcus infernus (strain DSM 11812

Query: 3 YDSFWVKI 10
YDSF++ I
Sbjct: 163 YDSFYLSI 170


>sp|UGNO_METMP|UDP-N-ACETYLGLUCOSAMINE 3-dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 2 FYDSFWVK 9
YD WVK
Sbjct: 253 LYDEEWVK 260


>sp|GATD_SACI7|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 1 NFYDSFWVKI 10
N +WVKI
Sbjct: 149 NMKPEYWVKI 158


>sp|GATD_SACI6|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain M.16.4

Query: 1 NFYDSFWVKI 10
N +WVKI
Sbjct: 149 NMKPEYWVKI 158


>sp|GATD_SACI4|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain M.14.25

Query: 1 NFYDSFWVKI 10
N +WVKI
Sbjct: 149 NMKPEYWVKI 158


>sp|GATD_SACI3|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 1 NFYDSFWVKI 10
N +WVKI
Sbjct: 149 NMKPEYWVKI 158


>sp|GATD_SACI2|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 1 NFYDSFWVKI 10
N +WVKI
Sbjct: 149 NMKPEYWVKI 158


>sp|GATD_SACI1|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 1 NFYDSFWVKI 10
N +WVKI
Sbjct: 149 NMKPEYWVKI 158


>sp|AROC_PYRCJ|CHORISMATE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 NFYDSFWVK 9
++Y+ W+K
Sbjct: 91 SYYEELWLK 99


>sp|AROC_PYRNV|CHORISMATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 NFYDSFWVK 9
++Y+ W+K
Sbjct: 91 SYYEELWMK 99


>sp|AROC_PYRIL|CHORISMATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 NFYDSFWVK 9
++Y+ W+K
Sbjct: 91 SYYEELWMK 99


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 5 SFWVKI 10
S+WVKI
Sbjct: 501 SYWVKI 506


>sp|AROC_CALMQ|CHORISMATE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 NFYDSFWVK 9
N+Y W+K
Sbjct: 91 NYYMDIWMK 99




185|SequenceR|930|921|ITDSINFYDS

>sp|IF2B_THEGJ|TRANSLATION initiation factor 2 subunit|Thermococcus gammatolerans (strain

Query: 1 ITDSINFYD 9
+++SI+FYD
Sbjct: 1 MSESIDFYD 9


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 INFYDS 10
INFYDS
Sbjct: 432 INFYDS 437


>sp|MCRB_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 3 DSINFYD 9
D+IN YD
Sbjct: 9 DTINLYD 15


>sp|SYW_PYRAE|TRYPTOPHAN--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ITDSINFYD 9
ITD FYD
Sbjct: 111 ITDDEKFYD 119


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 INFYDS 10
+NFYDS
Sbjct: 534 VNFYDS 539


>sp|HFLX_THEPD|GTPASE HflX|Thermofilum pendens (strain DSM 2475

Query: 1 ITDSINFYD 9
+TD+I F D
Sbjct: 244 VTDTIGFID 252


>sp|HICDH_PYRHO|ISOCITRATE/HOMOISOCITRATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ITDSINFYD 9
+TD I FY+
Sbjct: 27 VTDKIKFYE 35


>sp|ENO_METS5|ENOLASE sedula (strain ATCC 51363

Query: 3 DSINFYDS 10
DSIN+Y S
Sbjct: 66 DSINYYIS 73




186|SequenceR|935|926|FSIIAITDSI

>sp|SAHH_PYRHO|ADENOSYLHOMOCYSTEINASE horikoshii (strain ATCC 700860

Query: 1 FSIIAITDS 9
FS+IA+ DS
Sbjct: 172 FSVIAVNDS 180


>sp|DHOM_METJA|HOMOSERINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FSIIAITDS 9
F ++AITDS
Sbjct: 33 FKVVAITDS 41


>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 3 IIAITDS 9
IIA+TDS
Sbjct: 582 IIAVTDS 588




187|SequenceR|940|931|GFGIFFSIIA

>sp|ACDD_METJA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanocaldococcus

Query: 1 GFGIFFSIIA 10
G+GI FSI A
Sbjct: 293 GYGIEFSINA 302


>sp|AOR_PYRAB|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus abyssi (strain GE5

Query: 1 GFGIFF 6
GFGI+F
Sbjct: 36 GFGIYF 41


>sp|AOR_PYRHO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus horikoshii (strain

Query: 1 GFGIFF 6
GFGI+F
Sbjct: 36 GFGIYF 41


>sp|ACDD_METTH|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanothermobacter

Query: 1 GFGIFFSI 8
G+GI FSI
Sbjct: 273 GYGIEFSI 280


>sp|OGT_PYRFU|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FGIFFSI 8
FGI FSI
Sbjct: 26 FGIIFSI 32


>sp|FDHC_METFO|PROBABLE formate transporter|Methanobacterium formicicum

Query: 2 FGIFFSIIA 10
FGI+F I+A
Sbjct: 205 FGIWFPIMA 213




188|SequenceR|945|936|AGFRLGFGIF

>sp|HIS8_METAC|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 AGFRLGFGIF 10
AG RLG+GI
Sbjct: 232 AGLRLGYGIL 241


>sp|HIS8_METMA|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AGFRLGFGI 9
AG RLG+GI
Sbjct: 233 AGLRLGYGI 241


>sp|HIS8_METBF|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 AGFRLGFGI 9
AG RLG+GI
Sbjct: 231 AGLRLGYGI 239


>sp|HIS8_METBU|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 AGFRLGFGI 9
AG R+G+GI
Sbjct: 229 AGMRMGYGI 237


>sp|BGAL_PYRWO|BETA-GALACTOSIDASE woesei

Query: 2 GFRLGFGIF 10
GFR+ FG++
Sbjct: 463 GFRMRFGLY 471


>sp|NTPTH_STAMF|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Staphylothermus marinus (strain ATCC 43588

Query: 2 GFRLGFGI 9
GFR+GF I
Sbjct: 45 GFRIGFKI 52


>sp|HIS8_METS3|HISTIDINOL-PHOSPHATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 AGFRLGFGI 9
AG R+G+G+
Sbjct: 227 AGMRMGYGL 235


>sp|HIS8_METST|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 AGFRLGFGI 9
AG R+G+G+
Sbjct: 227 AGLRIGYGL 235


>sp|HIS8_METJA|HISTIDINOL-PHOSPHATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AGFRLGFGI 9
AG R+G+G+
Sbjct: 236 AGMRVGYGV 244


>sp|HIS8_METM5|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C5 /

Query: 1 AGFRLGFGI 9
AG R+GFG+
Sbjct: 233 AGQRVGFGV 241


>sp|HIS8_METTH|HISTIDINOL-PHOSPHATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 AGFRLGFGI 9
AG R+G+G+
Sbjct: 234 AGMRIGYGL 242


>sp|HIS8_METKA|HISTIDINOL-PHOSPHATE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 AGFRLGFGI 9
AG R+G+GI
Sbjct: 251 AGARVGYGI 259


>sp|GSA_SULAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GFRLGFG 8
GFRLG G
Sbjct: 236 GFRLGLG 242


>sp|HIS8_META3|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 AGFRLGFGI 9
AG R+G+GI
Sbjct: 233 AGQRIGYGI 241


>sp|AAT_THEKO|ASPARTATE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GFRLGFGI 9
GFRLG+ I
Sbjct: 206 GFRLGYAI 213


>sp|G1PDH_NATPD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Natronomonas pharaonis (strain ATCC 35678

Query: 1 AGFRLGFG 8
AGF +GFG
Sbjct: 89 AGFLVGFG 96


>sp|GSA_PYRAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GFRLGFG 8
GFRLG G
Sbjct: 235 GFRLGLG 241


>sp|HIS8_METAR|HISTIDINOL-PHOSPHATE aminotransferase|Methanocella arvoryzae (strain DSM 22066

Query: 1 AGFRLGFG 8
AG R+G+G
Sbjct: 226 AGMRIGYG 233


>sp|CCA_METTH|CCA-ADDING enzyme|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 AGFRLGFG 8
+G RLG+G
Sbjct: 82 SGLRLGYG 89


>sp|GSA_METS5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Metallosphaera sedula (strain ATCC 51363

Query: 2 GFRLGFG 8
GFRLG G
Sbjct: 236 GFRLGLG 242


>sp|HIS8_METVS|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 AGFRLGFGI 9
AG R+G+G+
Sbjct: 233 AGQRIGYGV 241


>sp|HIS8_HALSA|HISTIDINOL-PHOSPHATE aminotransferase|Halobacterium salinarum (strain ATCC 700922

Query: 1 AGFRLGFGI 9
AG RLG+ +
Sbjct: 236 AGIRLGYAV 244


>sp|HIS8_HALS3|HISTIDINOL-PHOSPHATE aminotransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 AGFRLGFGI 9
AG RLG+ +
Sbjct: 236 AGIRLGYAV 244


>sp|HIS8_HALMA|HISTIDINOL-PHOSPHATE aminotransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 AGFRLGFGI 9
AG RLG+ +
Sbjct: 227 AGIRLGYAV 235


>sp|PRIS_THESM|DNA primase small subunit PriS|Thermococcus sibiricus (strain DSM 12597

Query: 3 FRLGFGIF 10
FRL FG F
Sbjct: 202 FRLRFGYF 209


>sp|PRIS_PYRHO|DNA primase small subunit PriS|Pyrococcus horikoshii (strain ATCC

Query: 2 GFRLGFGIF 10
FRL FG F
Sbjct: 205 AFRLRFGYF 213


>sp|HIS8_METMP|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 AGFRLGFGI 9
AG R+G+G+
Sbjct: 233 AGQRVGYGV 241


>sp|HIS8_METM7|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C7 /

Query: 1 AGFRLGFGI 9
AG R+G+G+
Sbjct: 233 AGQRVGYGV 241


>sp|HIS8_METM6|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C6 /

Query: 1 AGFRLGFGI 9
AG R+G+G+
Sbjct: 233 AGQRVGYGV 241


>sp|RL10E_CALMQ|LARGE ribosomal subunit protein uL16|Caldivirga maquilingensis (strain

Query: 2 GFRLGFGI 9
G RL FG+
Sbjct: 114 GMRLAFGV 121


>sp|PRIS_THEKO|DNA primase small subunit PriS|Thermococcus kodakarensis (strain ATCC

Query: 3 FRLGFGIF 10
FRL FG F
Sbjct: 204 FRLRFGYF 211


>sp|SYD_PYRAE|ASPARTATE--TRNA(ASP) ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AGFRLGF 7
AGF LGF
Sbjct: 394 AGFGLGF 400


>sp|PRIS_PYRAB|DNA primase small subunit PriS|Pyrococcus abyssi (strain GE5 /

Query: 3 FRLGFGIF 10
FRL FG F
Sbjct: 206 FRLRFGYF 213


>sp|GSA_IGNH4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GFRLGFG 8
G+RLG G
Sbjct: 240 GYRLGLG 246


>sp|GSA_PYRAE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GFRLGFG 8
GFR+G G
Sbjct: 235 GFRVGLG 241


>sp|LEU3_ARCFU|3-ISOPROPYLMALATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GFRLGFG 8
GF GFG
Sbjct: 121 GFEFGFG 127


>sp|PRIS_THEON|DNA primase small subunit PriS|Thermococcus onnurineus (strain NA1)

Query: 3 FRLGFGIF 10
FRL FG F
Sbjct: 204 FRLRFGYF 211


>sp|GSA_METPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 GFRLGFG 8
G+RLG G
Sbjct: 239 GYRLGIG 245


>sp|NTPTH_HYPBU|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Hyperthermus butylicus (strain DSM 5456

Query: 2 GFRLGFGI 9
G+R+GF I
Sbjct: 46 GYRIGFKI 53




189|SequenceR|950|941|AFNWKAGFRL

>sp|COBD_METTH|PROBABLE cobalamin biosynthesis protein CobD|Methanothermobacter

Query: 1 AFNWKAGFRL 10
NW+ FR+
Sbjct: 214 GMNWRGSFRI 223


>sp|THIC_NATPD|PHOSPHOMETHYLPYRIMIDINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 AFNWKAGFRL 10
AF+W+ F L
Sbjct: 373 AFDWRRQFEL 382


>sp|BGAL_PYRWO|BETA-GALACTOSIDASE woesei

Query: 2 FNWKAGFRL 10
F W GFR+
Sbjct: 458 FEWALGFRM 466


>sp|RFCL_METS3|REPLICATION factor C large subunit|Methanobrevibacter smithii (strain ATCC

Query: 3 NWKAG 7
NWKAG
Sbjct: 31 NWKAG 35


>sp|RNZ_PYRNV|RIBONUCLEASE Z|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 FNWKAGFRL 10
F W G++L
Sbjct: 133 FQWDVGYKL 141


>sp|RNZ_PYRIL|RIBONUCLEASE Z|Pyrobaculum islandicum (strain DSM 4184

Query: 2 FNWKAGFRL 10
F W G++L
Sbjct: 133 FQWDVGYKL 141


>sp|RNZ_PYRCJ|RIBONUCLEASE Z|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 FNWKAGFRL 10
F W G++L
Sbjct: 133 FEWDVGYKL 141


>sp|PGK_THEAC|PHOSPHOGLYCERATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 AFNWKAGF 8
AF W +GF
Sbjct: 232 AFLWASGF 239


>sp|AGCS_METMP|SODIUM/ALANINE symporter AgcS|Methanococcus maripaludis (strain DSM 14266

Query: 1 AFNWKAGF 8
AFN+ AGF
Sbjct: 249 AFNFSAGF 256


>sp|AATA_SACS2|A-TYPE ATP synthase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 1 AFNWKAGF 8
A NW GF
Sbjct: 428 AINWLQGF 435


>sp|AATA_SACI7|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 AFNWKAGF 8
A NW GF
Sbjct: 428 AINWLQGF 435


>sp|AATA_SACI6|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.4 /

Query: 1 AFNWKAGF 8
A NW GF
Sbjct: 428 AINWLQGF 435


>sp|AATA_SACI4|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.14.25 /

Query: 1 AFNWKAGF 8
A NW GF
Sbjct: 428 AINWLQGF 435


>sp|AATA_SACI3|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.27)

Query: 1 AFNWKAGF 8
A NW GF
Sbjct: 428 AINWLQGF 435


>sp|AATA_SACI2|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 AFNWKAGF 8
A NW GF
Sbjct: 428 AINWLQGF 435


>sp|AATA_SACI1|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 AFNWKAGF 8
A NW GF
Sbjct: 428 AINWLQGF 435


>sp|AATA_METS5|A-TYPE ATP synthase subunit A|Metallosphaera sedula (strain ATCC 51363

Query: 1 AFNWKAGF 8
A NW GF
Sbjct: 428 AINWLQGF 435




190|SequenceR|955|946|NDYANAFNWK

>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YANAFNWK 10
Y N NWK
Sbjct: 652 YCNYLNWK 659


>sp|GYRB_HALL2|DNA gyrase subunit B|Haloferax lucentense (strain DSM 14919

Query: 1 NDYANAFN 8
NDYAN+ +
Sbjct: 298 NDYANSHD 305


>sp|BRIX_METMP|PROBABLE Brix domain-containing ribosomal biogenesis|Methanococcus

Query: 1 NDYANAFNWK 10
ND A FN+K
Sbjct: 18 NDLARVFNFK 27


>sp|URK_HALSA|URIDINE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 DYANAFNWK 10
D+ +AF W+
Sbjct: 59 DHPSAFEWE 67


>sp|Y875_METJA|UNCHARACTERIZED protein MJ0875|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NDYANAFNW 9
++YAN++ W
Sbjct: 249 DEYANSYKW 257


>sp|Y133_THEAC|PUTATIVE quercetin 2,3-dioxygenase Ta0133|Thermoplasma acidophilum (strain

Query: 2 DYANAFNW 9
DY N F W
Sbjct: 9 DYDNGFPW 16




191|SequenceR|960|951|AVFVHNDYAN

>sp|DUT_ARCFU|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Archaeoglobus

Query: 1 AVFVHNDYA 9
++ VHNDY
Sbjct: 125 SIVVHNDYG 133


>sp|RL24E_HALSA|LARGE ribosomal subunit protein eL24|Halobacterium salinarum (strain

Query: 2 VFVHND 7
+FVHND
Sbjct: 21 MFVHND 26


>sp|RL24E_HALS3|LARGE ribosomal subunit protein eL24|Halobacterium salinarum (strain

Query: 2 VFVHND 7
+FVHND
Sbjct: 21 MFVHND 26


>sp|SYW_ARCFU|TRYPTOPHAN--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AVFVHNDY 8
A+F H DY
Sbjct: 44 AIFGHRDY 51


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AVFVHND 7
AVFVH D
Sbjct: 221 AVFVHPD 227


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AVFVHND 7
AVFVH D
Sbjct: 221 AVFVHPD 227


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 AVFVHND 7
AVFVH D
Sbjct: 221 AVFVHPD 227


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 AVFVHND 7
AVFVH D
Sbjct: 259 AVFVHPD 265


>sp|RISC_METJA|RIBOFLAVIN synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VFVHNDYA 9
VFVH D A
Sbjct: 98 VFVHEDEA 105


>sp|SYH_METVS|HISTIDINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 VFVHNDYAN 10
+FV ND+ N
Sbjct: 61 LFVFNDHGN 69


>sp|SYT_METS3|THREONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 VFVHNDYAN 10
+ +H+DY N
Sbjct: 4 LLIHSDYLN 12


>sp|FSX1_HALSH|FUSEXIN 1|Haloplanus natans (strain DSM 17983

Query: 1 AVFVHND 7
AVFV+ND
Sbjct: 505 AVFVNND 511


>sp|SYC_ARCFU|CYSTEINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VFVHNDY 8
++VHND+
Sbjct: 255 IWVHNDF 261


>sp|TRUA_METS3|TRNA pseudouridine synthase A|Methanobrevibacter smithii (strain ATCC

Query: 3 FVHNDYA 9
FV++DYA
Sbjct: 248 FVYDDYA 254




192|SequenceR|965|956|YILRGAVFVH

>sp|FAEHP_ARCFU|BIFUNCTIONAL enzyme Fae/Hps|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YILRGAVFVH 10
Y++ +VF+H
Sbjct: 108 YVVVASVFIH 117




193|SequenceR|970|961|IINLCYILRG

>sp|AMTAB_METTH|PROBABLE threonylcarbamoyladenosine tRNA

Query: 1 IINLCYI 7
IIN CY+
Sbjct: 44 IINTCYV 50


>sp|LIPA_SACS2|LIPOYL synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 LCYILRG 10
CY+L+G
Sbjct: 63 FCYVLKG 69


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 NLCYILR 9
+LCY++R
Sbjct: 466 DLCYVVR 472


>sp|Y988_METJA|UNCHARACTERIZED protein MJ0988|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IINLCY 6
++NLCY
Sbjct: 311 VLNLCY 316


>sp|CS12F_MICX1|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f2|Micrarchaeota archaeon (strain

Query: 3 NLCYILR 9
N CY++R
Sbjct: 300 NYCYLIR 306


>sp|Y1505_METJA|PUTATIVE ATP-dependent RNA helicase MJ1505|Methanocaldococcus jannaschii

Query: 3 NLCYIL 8
N+CY+L
Sbjct: 487 NMCYLL 492




194|SequenceR|975|966|RVYWFIINLC

>sp|SLAA_SACS2|S-LAYER protein A|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VYWFII 7
+YWF+I
Sbjct: 275 IYWFVI 280


>sp|PYRE_STAMF|OROTATE phosphoribosyltransferase|Staphylothermus marinus (strain ATCC

Query: 4 WFIINL 9
WFIIN+
Sbjct: 173 WFIINV 178


>sp|ARLY_SACS2|ARGININOSUCCINATE lyase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RVYWFIIN 8
+ YW +IN
Sbjct: 312 KYYWLVIN 319


>sp|Y629_METJA|UPF0111 protein MJ0629|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RVYWFIINL 9
R+Y ++INL
Sbjct: 166 RIYKYLINL 174


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 RVYWFI 6
R+YW I
Sbjct: 242 RIYWLI 247


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RVYWFI 6
R+YW I
Sbjct: 237 RIYWLI 242


>sp|HIS8_METS3|HISTIDINOL-PHOSPHATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 YWFIINLC 10
YW I++C
Sbjct: 342 YWIRISIC 349


>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RVYWFIINL 9
+VYW +NL
Sbjct: 174 QVYWGYLNL 182


>sp|COBD_PYRFU|PROBABLE cobalamin biosynthesis protein CobD|Pyrococcus furiosus (strain

Query: 1 RVYWFII 7
+VYW I+
Sbjct: 265 KVYWIIV 271




195|SequenceR|980|971|LFDLLRVYWF

>sp|FOR_THELN|TUNGSTEN-CONTAINING formaldehyde ferredoxin oxidoreductase|Thermococcus litoralis

Query: 1 LFDLLRVYW 9
++ L+R YW
Sbjct: 531 VYALMRAYW 539


>sp|MSRA_METTH|PEPTIDE methionine sulfoxide reductase MsrA|Methanothermobacter

Query: 3 DLLRVYW 9
DLL V+W
Sbjct: 74 DLLDVFW 80


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 1 LFDLLRVYW 9
++D L+ YW
Sbjct: 495 IYDALKSYW 503


>sp|BGAL_SACSH|BETA-GALACTOSIDASE shibatae (strain ATCC 51178

Query: 1 LFDLLRVYW 9
L+D+L YW
Sbjct: 368 LYDVLTKYW 376


>sp|BGAL_SACS2|BETA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 1 LFDLLRVYW 9
L+D+L YW
Sbjct: 368 LYDVLTKYW 376




196|SequenceR|985|976|QQNVALFDLL

***** No hits found ******


197|SequenceR|990|981|VYPGAQQNVA

>sp|SYH_THEAC|HISTIDINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VYPGAQQNVA 10
+Y G+Q+NV
Sbjct: 404 MYTGSQENVG 413




198|SequenceR|995|986|KGIMMVYPGA

>sp|K6PF_METAC|ADP-SPECIFIC phosphofructokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GIMMVYPGA 10
GIM +Y GA
Sbjct: 336 GIMSLYQGA 344


>sp|RL4_META3|LARGE ribosomal subunit protein uL4|Methanococcus aeolicus (strain ATCC

Query: 2 GIMMVYPGA 10
G+M + PGA
Sbjct: 224 GVMHIAPGA 232


>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KGIMMVYPG 9
KG++++Y G
Sbjct: 394 KGVLLLYNG 402


>sp|IF6_METMJ|TRANSLATION initiation factor 6|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 IMMVYPGA 10
I +VYPGA
Sbjct: 23 IAIVYPGA 30


>sp|RNZ_THESM|RIBONUCLEASE Z|Thermococcus sibiricus (strain DSM 12597

Query: 1 KGIMMVYPG 9
KG+ +VY G
Sbjct: 198 KGVKIVYTG 206


>sp|UPP_METTH|URACIL phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 1 KGIMMVYPGA 10
+G+M V+P A
Sbjct: 91 EGVMKVFPEA 100




199|SequenceR|1000|991|MNAVMKGIMM

>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 1 MNAVMKG 7
+NA+MKG
Sbjct: 56 LNAIMKG 62




200|SequenceR|1005|996|VVIYFMNAVM

>sp|MTRD_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanococcus maripaludis (strain DSM

Query: 4 YFMNAVM 10
+FMNAV+
Sbjct: 184 FFMNAVL 190




201|SequenceR|1010|1001|VLAMIVVIYF

>sp|CYDE_METM7|L-CYSTEINE desulfidase|Methanococcus maripaludis (strain C7 /

Query: 1 VLAMIVVIY 9
+LAM+V IY
Sbjct: 268 LLAMLVTIY 276


>sp|BACR1_HALSS|ARCHAERHODOPSIN-1 sp. (strain SG1)

Query: 4 MIVVIYF 10
MIVV+YF
Sbjct: 157 MIVVLYF 163


>sp|BACR1_HALEZ|ARCHAERHODOPSIN-1 ezzemoulense (Halorubrum chaoviator)

Query: 4 MIVVIYF 10
MIVV+YF
Sbjct: 157 MIVVLYF 163


>sp|BACR3_HALSD|ARCHAERHODOPSIN-3 sodomense

Query: 4 MIVVIYF 10
MIVV+YF
Sbjct: 155 MIVVLYF 161




202|SequenceR|1015|1006|GFSLLVLAMI

>sp|EPDD_METMP|MINOR structural pilin EpdD|Methanococcus maripaludis (strain DSM 14266

Query: 2 FSLLVLAMI 10
FS+LVLA+I
Sbjct: 19 FSVLVLAVI 27




203|SequenceR|1020|1011|AKRPVGFSLL

***** No hits found ******


204|SequenceR|1025|1016|HPYLIAKRPV

>sp|SYP_METJA|PROLINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PYLIAKRP 9
PYLI+KRP
Sbjct: 184 PYLISKRP 191


>sp|SYP_METM6|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 PYLIAKRP 9
PY+I+KRP
Sbjct: 184 PYIISKRP 191


>sp|SYP_METM5|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 PYLIAKRP 9
PY+I+KRP
Sbjct: 184 PYIISKRP 191


>sp|SYP_METM7|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 PYLIAKRP 9
PY+I+KRP
Sbjct: 184 PYIISKRP 191


>sp|SYP_SULTO|PROLINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PYLIAKRP 9
PY+I+KRP
Sbjct: 194 PYMISKRP 201


>sp|SYP_METS5|PROLINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 PYLIAKRP 9
PYLI++RP
Sbjct: 194 PYLISRRP 201


>sp|SYP_METMP|PROLINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 PYLIAKRP 9
PY+I+KRP
Sbjct: 184 PYVISKRP 191


>sp|SYP_CALMQ|PROLINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 PYLIAKRP 9
PYLI++RP
Sbjct: 195 PYLISRRP 202


>sp|SYP_METTH|PROLINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PYLIAKRP 9
PYLI +RP
Sbjct: 200 PYLITRRP 207


>sp|SYP_AERPE|PROLINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PYLIAKRP 9
PY+I+KRP
Sbjct: 196 PYVISKRP 203


>sp|SYP_THEKO|PROLINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PYLIAKRP 9
PY+I+KRP
Sbjct: 193 PYIISKRP 200


>sp|SYP_METST|PROLINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 PYLIAKRP 9
PY I+KRP
Sbjct: 184 PYSISKRP 191


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 PYLIAKRP 9
PY+I++RP
Sbjct: 191 PYMISQRP 198


>sp|RPO11_THEON|DNA-DIRECTED RNA polymerase subunit Rpo11|Thermococcus onnurineus (strain NA1)

Query: 1 HPYLIAKRP 9
HP L+A++P
Sbjct: 47 HPVLMARKP 55


>sp|RPO11_THEGJ|DNA-DIRECTED RNA polymerase subunit Rpo11|Thermococcus gammatolerans (strain

Query: 1 HPYLIAKRP 9
HP L+A++P
Sbjct: 47 HPILMARKP 55


>sp|PORA_PYRAB|PYRUVATE synthase subunit PorA|Pyrococcus abyssi (strain GE5 /

Query: 1 HPYLIAKRPV 10
H YL KRP+
Sbjct: 198 HAYLDPKRPI 207


>sp|PORA_PYRHO|PYRUVATE synthase subunit PorA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HPYLIAKRPV 10
H YL KRP+
Sbjct: 198 HAYLDPKRPI 207


>sp|RPO11_THESM|DNA-DIRECTED RNA polymerase subunit Rpo11|Thermococcus sibiricus (strain DSM

Query: 1 HPYLIAKRP 9
HP L+A++P
Sbjct: 47 HPVLMARKP 55


>sp|NADK_METB6|NAD kinase|Methanoregula boonei (strain DSM 21154

Query: 2 PYLIAKRP 9
PYL++ RP
Sbjct: 197 PYLLSSRP 204


>sp|TSR3_METS3|16S rRNA aminocarboxypropyltransferase|Methanobrevibacter smithii

Query: 2 PYLIAKRPV 10
P+LIA PV
Sbjct: 91 PFLIATNPV 99


>sp|KAD6_THEON|PUTATIVE adenylate kinase|Thermococcus onnurineus (strain NA1)

Query: 1 HPYLIAKR 8
HP LIA+R
Sbjct: 89 HPRLIAER 96


>sp|SYR_KORCO|ARGININE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 HPYLIAKRP 9
HP L A RP
Sbjct: 592 HPVLSAARP 600


>sp|TSR3_METKA|16S rRNA aminocarboxypropyltransferase|Methanopyrus kandleri (strain

Query: 2 PYLIAKRPV 10
PYLIA PV
Sbjct: 89 PYLIAANPV 97


>sp|SYP_METS3|PROLINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 PYLIAKRP 9
PY + KRP
Sbjct: 185 PYTLTKRP 192


>sp|NADK_METLZ|NAD kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 PYLIAKRP 9
PY+++ RP
Sbjct: 198 PYMLSSRP 205


>sp|TSR3_HALSA|16S rRNA aminocarboxypropyltransferase|Halobacterium salinarum

Query: 2 PYLIAKRPV 10
P+L+A PV
Sbjct: 84 PFLVAANPV 92


>sp|TSR3_HALS3|16S rRNA aminocarboxypropyltransferase|Halobacterium salinarum

Query: 2 PYLIAKRPV 10
P+L+A PV
Sbjct: 84 PFLVAANPV 92


>sp|TSR3_METBU|16S rRNA aminocarboxypropyltransferase|Methanococcoides burtonii

Query: 2 PYLIAKRPV 10
PYL+A PV
Sbjct: 97 PYLVATNPV 105


>sp|RPO11_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo11|Pyrococcus abyssi (strain GE5 /

Query: 1 HPYLIAKRP 9
HP L+A++P
Sbjct: 47 HPILMARKP 55


>sp|TSR3_METST|16S rRNA aminocarboxypropyltransferase|Methanosphaera stadtmanae

Query: 2 PYLIAKRPV 10
P+L+A PV
Sbjct: 92 PFLVAANPV 100


>sp|SYP_SULAC|PROLINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PYLIAKRP 9
PY++++RP
Sbjct: 194 PYIMSQRP 201


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PYLIAKRP 9
PY++++RP
Sbjct: 194 PYVLSERP 201


>sp|NADK_METPE|NAD kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 PYLIAKRP 9
PY+++ RP
Sbjct: 197 PYMLSSRP 204


>sp|NADK_METMJ|NAD kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PYLIAKRP 9
PY+++ RP
Sbjct: 197 PYMLSSRP 204


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 PYLIAKRP 9
PY++++RP
Sbjct: 194 PYVLSERP 201


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PYLIAKRP 9
PY++++RP
Sbjct: 194 PYVLSERP 201


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 PYLIAKRP 9
PY++++RP
Sbjct: 194 PYVLSERP 201


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 PYLIAKRP 9
PY++++RP
Sbjct: 194 PYVLSERP 201


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 PYLIAKRP 9
PY++++RP
Sbjct: 194 PYVLSERP 201


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 PYLIAKRP 9
PY++++RP
Sbjct: 194 PYVLSERP 201


>sp|TSR3_METBF|16S rRNA aminocarboxypropyltransferase|Methanosarcina barkeri (strain

Query: 2 PYLIAKRPV 10
PYL+A PV
Sbjct: 97 PYLLAGNPV 105


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 1 HPYLIAKRP 9
HP ++AK P
Sbjct: 119 HPEILAKSP 127


>sp|SYP_METAR|PROLINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 PYLIAKRP 9
P+++ KRP
Sbjct: 194 PFIVHKRP 201


>sp|SYT_METST|THREONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 PYLIAKR 8
PY+++KR
Sbjct: 604 PYMVSKR 610


>sp|SYP_PYRHO|PROLINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 YLIAKRP 9
Y+I+KRP
Sbjct: 193 YIISKRP 199


>sp|DCDA_METTH|DIAMINOPIMELATE decarboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 HPYLIAKRPV 10
H L+A+RP+
Sbjct: 327 HHILVAERPL 336


>sp|SYP_ARCFU|PROLINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PYLIAKRP 9
PY++ +RP
Sbjct: 189 PYMVIRRP 196


>sp|SYP_PYRAB|PROLINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 YLIAKRP 9
Y+I+KRP
Sbjct: 193 YIISKRP 199


>sp|SYP_PYRAE|PROLINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 YLIAKRP 9
YLI KRP
Sbjct: 199 YLINKRP 205


>sp|TSR3_METAC|16S rRNA aminocarboxypropyltransferase|Methanosarcina acetivorans

Query: 2 PYLIAKRPV 10
PY++A PV
Sbjct: 98 PYMLAGNPV 106


>sp|TSR3_METMA|16S rRNA aminocarboxypropyltransferase|Methanosarcina mazei (strain

Query: 2 PYLIAKRPV 10
PY++A PV
Sbjct: 97 PYMLAGNPV 105


>sp|SYP_PYRFU|PROLINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 YLIAKRP 9
Y+I+KRP
Sbjct: 193 YVISKRP 199




205|SequenceR|1030|1021|WSPAEHPYLI

>sp|CCA_SULAC|CCA-ADDING enzyme|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 AEHPYLI 10
AEHPYLI
Sbjct: 92 AEHPYLI 98


>sp|DCD_SULTO|DCTP deaminase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SPAEHPY 8
SP EHPY
Sbjct: 149 SPVEHPY 155


>sp|CCA_SULTO|CCA-ADDING enzyme|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 AEHPYLI 10
AEHPYLI
Sbjct: 92 AEHPYLI 98


>sp|PYRG_HALHT|CTP synthase|Haloarcula hispanica (strain ATCC 33960

Query: 2 SPAEHPYLI 10
+P +HPY I
Sbjct: 504 APEDHPYFI 512


>sp|CCA_SACS2|CCA-ADDING enzyme|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 AEHPYLI 10
AEHPY+I
Sbjct: 91 AEHPYVI 97


>sp|CCA_SACSH|CCA-ADDING enzyme|Saccharolobus shibatae (strain ATCC 51178

Query: 4 AEHPYLI 10
AEHPY+I
Sbjct: 91 AEHPYVI 97


>sp|CCA_SACI7|CCA-ADDING enzyme|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 AEHPYLI 10
AEHPY+I
Sbjct: 91 AEHPYVI 97


>sp|CCA_SACI6|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.16.4 /

Query: 4 AEHPYLI 10
AEHPY+I
Sbjct: 91 AEHPYVI 97


>sp|CCA_SACI4|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.14.25 /

Query: 4 AEHPYLI 10
AEHPY+I
Sbjct: 91 AEHPYVI 97


>sp|CCA_SACI3|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 AEHPYLI 10
AEHPY+I
Sbjct: 91 AEHPYVI 97


>sp|CCA_SACI2|CCA-ADDING enzyme|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 AEHPYLI 10
AEHPY+I
Sbjct: 91 AEHPYVI 97


>sp|CCA_SACI1|CCA-ADDING enzyme|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 AEHPYLI 10
AEHPY+I
Sbjct: 91 AEHPYVI 97


>sp|PYRG_HALMA|CTP synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PAEHPYLI 10
P +HPY I
Sbjct: 505 PEDHPYFI 512


>sp|CCA_METMA|CCA-ADDING enzyme|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 AEHPYL 9
AEHPYL
Sbjct: 110 AEHPYL 115


>sp|DCD_NATPD|DCTP deaminase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 SPAEHPY 8
SPAE PY
Sbjct: 160 SPAERPY 166


>sp|CCA_METAC|CCA-ADDING enzyme|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 AEHPYL 9
AEHPYL
Sbjct: 110 AEHPYL 115


>sp|CCA_HALMA|CCA-ADDING enzyme|Haloarcula marismortui (strain ATCC 43049

Query: 4 AEHPYLI 10
AEHPY++
Sbjct: 103 AEHPYVV 109


>sp|CCA_PYRAB|CCA-ADDING enzyme|Pyrococcus abyssi (strain GE5 /

Query: 2 SPAEHPYL 9
S AEHPY+
Sbjct: 101 SYAEHPYV 108


>sp|CCA_METBF|CCA-ADDING enzyme|Methanosarcina barkeri (strain Fusaro /

Query: 4 AEHPYL 9
AEHPYL
Sbjct: 110 AEHPYL 115


>sp|CCA_THEVO|CCA-ADDING enzyme|Thermoplasma volcanium (strain ATCC 51530

Query: 4 AEHPYL 9
AEHPY+
Sbjct: 97 AEHPYV 102


>sp|CCA_THEAI|CCA-ADDING enzyme|Thermoplasma acidophilum

Query: 4 AEHPYL 9
AEHPY+
Sbjct: 97 AEHPYV 102


>sp|CCA_THEAC|CCA-ADDING enzyme|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 AEHPYL 9
AEHPY+
Sbjct: 97 AEHPYV 102


>sp|CCA_PYRHO|CCA-ADDING enzyme|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 AEHPYL 9
AEHPY+
Sbjct: 104 AEHPYV 109


>sp|CCA_PYRFU|CCA-ADDING enzyme|Pyrococcus furiosus (strain ATCC 43587

Query: 4 AEHPYL 9
AEHPY+
Sbjct: 104 AEHPYV 109


>sp|CCA_PICTO|CCA-ADDING enzyme|Picrophilus torridus (strain ATCC 700027

Query: 4 AEHPYL 9
AEHPY+
Sbjct: 97 AEHPYV 102


>sp|CCA_METMP|CCA-ADDING enzyme|Methanococcus maripaludis (strain DSM 14266

Query: 4 AEHPYL 9
AEHPY+
Sbjct: 109 AEHPYV 114


>sp|CCA_METM7|CCA-ADDING enzyme|Methanococcus maripaludis (strain C7 /

Query: 4 AEHPYL 9
AEHPY+
Sbjct: 109 AEHPYV 114


>sp|CCA_METM5|CCA-ADDING enzyme|Methanococcus maripaludis (strain C5 /

Query: 4 AEHPYL 9
AEHPY+
Sbjct: 109 AEHPYV 114


>sp|ADEC_METJA|ADENINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WSPAEHPYL 9
WS E+P+L
Sbjct: 517 WSSFENPFL 525


>sp|DCDB_METTH|DCTP deaminase, dUMP-forming|Methanothermobacter thermautotrophicus

Query: 2 SPAEHPY 8
SPAE PY
Sbjct: 160 SPAERPY 166


>sp|CCA_THEGJ|CCA-ADDING enzyme|Thermococcus gammatolerans (strain DSM 15229

Query: 4 AEHPYL 9
AEHPY+
Sbjct: 104 AEHPYV 109


>sp|DCDB_METST|DCTP deaminase, dUMP-forming|Methanosphaera stadtmanae (strain ATCC

Query: 2 SPAEHPY 8
SP+E PY
Sbjct: 160 SPSEKPY 166


>sp|DCDB_HALSA|DCTP deaminase, dUMP-forming|Halobacterium salinarum (strain ATCC 700922

Query: 2 SPAEHPY 8
SPA+ PY
Sbjct: 160 SPADRPY 166


>sp|DCDB_HALS3|DCTP deaminase, dUMP-forming|Halobacterium salinarum (strain ATCC 29341

Query: 2 SPAEHPY 8
SPA+ PY
Sbjct: 160 SPADRPY 166


>sp|CCA_THEKO|CCA-ADDING enzyme|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 AEHPYL 9
AEHPY+
Sbjct: 104 AEHPYV 109


>sp|Y085_METJA|UNCHARACTERIZED lipoprotein MJ0085|Methanocaldococcus jannaschii (strain ATCC

Query: 1 WSPAEHPYLI 10
W+P PY I
Sbjct: 89 WTPWTRPYRI 98


>sp|CCA_ARCFU|CCA-ADDING enzyme|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 AEHPYL 9
AEHPY+
Sbjct: 95 AEHPYV 100


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 1 WSPAEHPYL 9
W+P HP +
Sbjct: 153 WTPGMHPMI 161


>sp|SYE_HALSA|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 WSPAEH 6
W PAEH
Sbjct: 525 WVPAEH 530


>sp|SYE_HALS3|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 WSPAEH 6
W PAEH
Sbjct: 525 WVPAEH 530


>sp|PYRG_METLZ|CTP synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 AEHPYLI 10
A+HPY +
Sbjct: 488 ADHPYFV 494


>sp|CCA_PYRIL|CCA-ADDING enzyme|Pyrobaculum islandicum (strain DSM 4184

Query: 4 AEHPYL 9
A+HPYL
Sbjct: 103 AQHPYL 108


>sp|CCA_HALSA|CCA-ADDING enzyme|Halobacterium salinarum (strain ATCC 700922

Query: 4 AEHPYL 9
AEHPY+
Sbjct: 102 AEHPYV 107


>sp|CCA_HALS3|CCA-ADDING enzyme|Halobacterium salinarum (strain ATCC 29341

Query: 4 AEHPYL 9
AEHPY+
Sbjct: 102 AEHPYV 107


>sp|CCA_HALLT|CCA-ADDING enzyme|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 AEHPYL 9
AEHPY+
Sbjct: 102 AEHPYV 107


>sp|DCD_HALLT|DCTP deaminase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 SPAEHPY 8
SPA+ PY
Sbjct: 160 SPAKRPY 166


>sp|LYSY_IGNH4|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 WSPAEHPY 8
W EHPY
Sbjct: 120 WYGYEHPY 127


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 WSPAEHPYLI 10
W E PY++
Sbjct: 311 WDEKEKPYIV 320


>sp|CCA_METB6|CCA-ADDING enzyme|Methanoregula boonei (strain DSM 21154

Query: 4 AEHPYL 9
AEHPY+
Sbjct: 102 AEHPYI 107


>sp|TRUA_METMA|TRNA pseudouridine synthase A|Methanosarcina mazei (strain ATCC

Query: 1 WSPAEHPY 8
W+ AE PY
Sbjct: 91 WAHAEVPY 98


>sp|Y857_METTH|PROTEIN MTH_857|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 SPAEHPYLI 10
SPA++P LI
Sbjct: 117 SPADYPSLI 125


>sp|CCA_PYRNV|CCA-ADDING enzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 AEHPYL 9
A+HPYL
Sbjct: 101 AQHPYL 106




206|SequenceR|1035|1026|DKALTWSPAE

>sp|ISF_METTE|IRON-SULFUR flavoprotein|Methanosarcina thermophila

Query: 3 ALTWSPAE 10
+TW+PAE
Sbjct: 155 GITWNPAE 162


>sp|HPCAL_NITMS|3-HYDROXYPROPIONATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 2 KALTWSPA 9
KAL W PA
Sbjct: 537 KALAWQPA 544


>sp|GGR_METPE|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 DKALTWSPAE 10
D+AL W AE
Sbjct: 103 DRALVWQAAE 112


>sp|PYRDB_SULAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Sulfolobus acidocaldarius

Query: 2 KALTWSPAE 10
K LT+SP E
Sbjct: 42 KTLTYSPLE 50


>sp|KATG2_HALMA|CATALASE-PEROXIDASE 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 DKALTWSPAE 10
DKA+ W P +
Sbjct: 182 DKAVNWGPED 191


>sp|Y1657_METJA|UNCHARACTERIZED protease MJ1657|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DKALTWSPAE 10
DKAL W E
Sbjct: 141 DKALFWDEKE 150


>sp|TYSY_METJA|PUTATIVE thymidylate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 ALTWSP 8
A+TW+P
Sbjct: 118 AITWNP 123




207|SequenceR|1040|1031|PHFVIDKALT

>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 1 PHFVIDKALT 10
PHF + KAL+
Sbjct: 412 PHFGVIKALS 421


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PHFVID 6
PH++ID
Sbjct: 34 PHYIID 39


>sp|HEM1_META3|GLUTAMYL-TRNA reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PHFVIDK 7
PH +IDK
Sbjct: 225 PHAIIDK 231


>sp|CDPAS_PICTO|CDP-ARCHAEOL synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 HFVIDKALT 10
HF++D+ T
Sbjct: 30 HFILDRGKT 38




208|SequenceR|1045|1036|FIMWYPHFVI

>sp|RL10E_SACS2|LARGE ribosomal subunit protein uL16|Saccharolobus solfataricus (strain

Query: 1 FIMW---YPHFVI 10
F MW YPH V+
Sbjct: 83 FFMWILKYPHHVL 95


>sp|RL10E_SACI7|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 1 FIMW---YPHFVI 10
F MW YPH V+
Sbjct: 83 FFMWILKYPHHVL 95


>sp|RL10E_SACI6|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 1 FIMW---YPHFVI 10
F MW YPH V+
Sbjct: 83 FFMWILKYPHHVL 95


>sp|RL10E_SACI4|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 1 FIMW---YPHFVI 10
F MW YPH V+
Sbjct: 83 FFMWILKYPHHVL 95


>sp|RL10E_SACI3|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 1 FIMW---YPHFVI 10
F MW YPH V+
Sbjct: 83 FFMWILKYPHHVL 95


>sp|RL10E_SACI2|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 1 FIMW---YPHFVI 10
F MW YPH V+
Sbjct: 83 FFMWILKYPHHVL 95


>sp|RL10E_SACI1|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 1 FIMW---YPHFVI 10
F MW YPH V+
Sbjct: 83 FFMWILKYPHHVL 95


>sp|PSB_ARCPA|PROTEASOME subunit beta|Archaeoglobus profundus (strain DSM 5631

Query: 2 IMWYPHFV 9
+ W+P+FV
Sbjct: 102 VRWFPYFV 109


>sp|GLMS_METJA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanocaldococcus jannaschii

Query: 3 MWYPHFVI 10
M YPHF++
Sbjct: 755 MGYPHFML 762


>sp|SYP_METMJ|PROLINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 MWYPH 7
+WYPH
Sbjct: 39 VWYPH 43


>sp|GLMS_SULTO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Sulfurisphaera tokodaii (strain DSM

Query: 5 YPHFVI 10
YPHF+I
Sbjct: 254 YPHFMI 259


>sp|GLMS_SULAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Sulfolobus acidocaldarius (strain

Query: 5 YPHFVI 10
YPHF+I
Sbjct: 254 YPHFMI 259


>sp|SPEE_THEKO|POLYAMINE aminopropyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 FIMWYP 6
FI WYP
Sbjct: 10 FIEWYP 15


>sp|PURT_METAR|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocella arvoryzae

Query: 4 WYPHFVI 10
WYP F +
Sbjct: 353 WYPQFKV 359


>sp|TSR3_METST|16S rRNA aminocarboxypropyltransferase|Methanosphaera stadtmanae

Query: 4 WYPHFV 9
W PHF+
Sbjct: 136 WGPHFI 141


>sp|EF2_ARCFU|ELONGATION factor 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IMWYPHFV 9
+MW P F+
Sbjct: 13 LMWKPKFI 20


>sp|SPEE_PYRAB|POLYAMINE aminopropyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 FIMWYP 6
FI WYP
Sbjct: 3 FIEWYP 8


>sp|TSR3_METTH|16S rRNA aminocarboxypropyltransferase|Methanothermobacter

Query: 1 FIMWYPHFV 9
+ W PHF+
Sbjct: 132 YFKWGPHFL 140


>sp|SPEE_THEON|POLYAMINE aminopropyltransferase|Thermococcus onnurineus (strain NA1)

Query: 1 FIMWYP 6
FI WYP
Sbjct: 10 FIEWYP 15


>sp|RL10E_CALMQ|LARGE ribosomal subunit protein uL16|Caldivirga maquilingensis (strain

Query: 2 IMWYPHFVI 10
I+ YPH VI
Sbjct: 89 IIKYPHHVI 97


>sp|EF1A_STAMF|ELONGATION factor 1-alpha|Staphylothermus marinus (strain ATCC 43588

Query: 1 FIMWYP 6
FI+W+P
Sbjct: 332 FIIWHP 337


>sp|SPEE_PYRFU|POLYAMINE aminopropyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FIMWYP 6
FI WYP
Sbjct: 5 FIEWYP 10


>sp|RL10E_METS5|LARGE ribosomal subunit protein uL16|Metallosphaera sedula (strain ATCC

Query: 1 FIMWYPHFVI 10
++ YPH VI
Sbjct: 86 YVTKYPHHVI 95


>sp|RL6_METHJ|LARGE ribosomal subunit protein uL6|Methanospirillum hungatei JF-1

Query: 3 MWYP 6
MWYP
Sbjct: 35 MWYP 38


>sp|GLMS_THEKO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Thermococcus kodakarensis (strain

Query: 5 YPHFVI 10
YPHF++
Sbjct: 251 YPHFML 256


>sp|GLMS_PYRAE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrobaculum aerophilum (strain ATCC

Query: 5 YPHFVI 10
YPHF++
Sbjct: 254 YPHFML 259


>sp|GLMS_METKA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanopyrus kandleri (strain AV19 /

Query: 5 YPHFVI 10
YPHF++
Sbjct: 257 YPHFML 262


>sp|GLMS_AERPE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Aeropyrum pernix (strain ATCC 700893

Query: 5 YPHFVI 10
YPHF++
Sbjct: 262 YPHFML 267


>sp|RL3_METMJ|LARGE ribosomal subunit protein uL3|Methanoculleus marisnigri (strain

Query: 4 WYPHFV 9
W+PH V
Sbjct: 241 WHPHHV 246


>sp|RL10E_SULTO|LARGE ribosomal subunit protein uL16|Sulfurisphaera tokodaii (strain

Query: 2 IMWYPHFVI 10
++ YPH VI
Sbjct: 87 VLKYPHHVI 95


>sp|SPEE_PYRHO|POLYAMINE aminopropyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FIMWYP 6
FI WYP
Sbjct: 6 FIEWYP 11


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 FIMWYP 6
F+ WYP
Sbjct: 585 FLYWYP 590


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 4 WYPHFVI 10
W+P FV+
Sbjct: 399 WHPFFVL 405


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 IMWYPHFV 9
I WYP ++
Sbjct: 369 IKWYPEYM 376


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FIMWYP 6
F+ WYP
Sbjct: 564 FLYWYP 569


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 2 IMWYPHFVI 10
++W PH V+
Sbjct: 133 VVWDPHEVV 141


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FIMWYP 6
F+ WYP
Sbjct: 571 FLYWYP 576


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IMWYPHFV 9
I WYP ++
Sbjct: 369 IKWYPEYM 376


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IMWYPHFV 9
+ W PH+V
Sbjct: 438 VQWIPHWV 445


>sp|Y686_METJA|UNCHARACTERIZED protein MJ0686|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FIMWYPHF 8
+ +WY HF
Sbjct: 179 YKIWYKHF 186


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IMWYPHFV 9
+ WYP +V
Sbjct: 438 VTWYPEWV 445


>sp|PURP_KORCO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 IMWYPHF 8
+ +YPHF
Sbjct: 205 VRFYPHF 211


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IMWYPHFV 9
+ WYP +V
Sbjct: 438 VTWYPEWV 445


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FIMWYP 6
F+ WYP
Sbjct: 569 FLYWYP 574


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IMWYPHFV 9
I WYP ++
Sbjct: 369 INWYPEYM 376


>sp|SYW_SULTO|TRYPTOPHAN--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IMWYPHFVI 10
I+WYP I
Sbjct: 192 IIWYPALQI 200


>sp|Y686_ARCFU|UNCHARACTERIZED protein AF_0686|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IMWYPH 7
I+W PH
Sbjct: 133 ILWCPH 138


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 IMWYPHFV 9
+ WYP +V
Sbjct: 438 VTWYPDWV 445


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IMWYPHFV 9
+ WYP +V
Sbjct: 438 VTWYPDWV 445




209|SequenceR|1050|1041|AYVEGFIMWY

>sp|Y1337_METJA|UNCHARACTERIZED protein MJ1337|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AYVEGFI 7
AYV GFI
Sbjct: 108 AYVRGFI 114


>sp|ARLY_PYRCJ|ARGININOSUCCINATE lyase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 YVEGFIMW 9
YV+ FI W
Sbjct: 246 YVDDFIRW 253


>sp|Y100_ARCFU|UPF0175 protein AF_0100|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AYVEGFI 7
AYVEG I
Sbjct: 42 AYVEGLI 48


>sp|Y1442_METJA|UNCHARACTERIZED protein MJ1442|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EGFIMWY 10
EG ++WY
Sbjct: 163 EGMVLWY 169


>sp|Y1350_METJA|UNCHARACTERIZED protein MJ1350|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YVEGFIMWY 10
Y+E F W+
Sbjct: 218 YIEEFCKWF 226


>sp|PYRG_AERPE|CTP synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 VEGFIMW 9
VEG I+W
Sbjct: 445 VEGTILW 451


>sp|Y1433_ARCFU|UPF0215 protein AF_1433|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AYVEGFI 7
YVEGF+
Sbjct: 28 GYVEGFL 34


>sp|TRUA_METKA|TRNA pseudouridine synthase A|Methanopyrus kandleri (strain AV19 /

Query: 4 EGFIMWY 10
EG I+W+
Sbjct: 212 EGLILWH 218


>sp|HELS_PYRHO|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YVEGFIMW 9
+ +GF+ W
Sbjct: 208 FYQGFVFW 215


>sp|HELS_PYRAB|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus abyssi (strain GE5 /

Query: 2 YVEGFIMW 9
+ +GF+ W
Sbjct: 208 FYQGFVFW 215


>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 1 AYVEGFIMWY 10
AY E F+ W+
Sbjct: 470 AYAEIFVRWF 479




210|SequenceR|1055|1046|VDIEYAYVEG

>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina barkeri

Query: 2 DIEYAYVEG 10
D+EYAY+ G
Sbjct: 330 DLEYAYMSG 338


>sp|Y453_METS3|PUTATIVE HTH-type transcriptional regulatory protein|Methanobrevibacter

Query: 2 DIEYAYVEG 10
DIEY+ VEG
Sbjct: 196 DIEYSNVEG 204


>sp|Y133_METTH|PUTATIVE ABC transporter ATP-binding protein|Methanothermobacter

Query: 1 VDIEYAYVEG 10
VDI Y Y +G
Sbjct: 9 VDIRYTYPDG 18


>sp|ISCS1_ARCFU|CYSTEINE desulfurase IscS 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VDIEYAYVEG 10
V++ ++Y+EG
Sbjct: 292 VNVRFSYIEG 301


>sp|ISCS2_ARCFU|CYSTEINE desulfurase IscS 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VDIEYAYVEG 10
V++ ++Y+EG
Sbjct: 292 VNVRFSYIEG 301


>sp|ECFA2_METHJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanospirillum hungatei

Query: 2 DIEYAY 7
D+EYAY
Sbjct: 9 DLEYAY 14


>sp|Y250_ARCFU|UNCHARACTERIZED protein AF_0250|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VDIEYAYVEG 10
++ EYAYV+G
Sbjct: 1 MEAEYAYVDG 10


>sp|ARCSA_METAC|ARCHAEOSINE synthase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 2 DIEYAYVE 9
D EY+Y+E
Sbjct: 284 DFEYSYIE 291


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 1 VDIEYAYVEG 10
+D+E+AY +G
Sbjct: 309 MDVEWAYEKG 318


>sp|RFCS_NANEQ|REPLICATION factor C small subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 DIEYAYVEG 10
DIE+ VEG
Sbjct: 290 DIEFRIVEG 298


>sp|RLMN_NITMS|RIBOSOMAL RNA large subunit methyltransferase|Nitrosopumilus maritimus

Query: 1 VDIEYAYVEG 10
V EYA +EG
Sbjct: 263 VTFEYALMEG 272




211|SequenceR|1060|1051|SDNACVDIEY

>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 DNACVDIEY 10
D CVD+E+
Sbjct: 879 DEECVDVEW 887


>sp|TBP_PYROC|TATA-BOX-BINDING protein|Pyrodictium occultum

Query: 3 NACVDIE 9
N CVD+E
Sbjct: 124 NVCVDLE 130


>sp|RL14_METAR|LARGE ribosomal subunit protein uL14|Methanocella arvoryzae (strain DSM

Query: 2 DNACVDIE 9
DNACV ++
Sbjct: 92 DNACVLVD 99




212|SequenceR|1065|1056|IQPIVSDNAC

>sp|CIMA_ARCFU|PUTATIVE (R)-citramalate synthase CimA|Archaeoglobus fulgidus (strain ATCC

Query: 2 QPIVSDNA 9
+PIV DNA
Sbjct: 273 KPIVGDNA 280


>sp|GATE_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma acidophilum (strain ATCC

Query: 2 QPIVSDNAC 10
Q +V+DN+C
Sbjct: 63 QYVVTDNSC 71


>sp|GATB_METVS|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus vannielii (strain ATCC

Query: 1 IQPIVSDNA 9
+QPIV DN+
Sbjct: 264 LQPIVLDNS 272


>sp|PGP_AERPE|PHOSPHOGLYCOLATE phosphatase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PIVSDNAC 10
P+V++N C
Sbjct: 69 PVVAENGC 76


>sp|METXA_METBU|HOMOSERINE O-acetyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PIVSDNAC 10
P+V++N C
Sbjct: 405 PVVNENGC 412


>sp|APGM_SACI1|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain Y.N.15.51

Query: 3 PIVSDNA 9
PI++DNA
Sbjct: 372 PIINDNA 378


>sp|ILVC_METMJ|KETOL-ACID reductoisomerase (NADP(+))|Methanoculleus marisnigri (strain ATCC

Query: 1 IQPIVSDNAC 10
I P + +NAC
Sbjct: 93 ISPNIRENAC 102


>sp|GATE_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma volcanium (strain ATCC

Query: 4 IVSDNAC 10
+V+DN+C
Sbjct: 68 VVTDNSC 74


>sp|GUOP_HALLT|GUANOSINE phosphorylase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 IQPIVSDNA 9
+ PIVSD+A
Sbjct: 149 VGPIVSDDA 157


>sp|PROB_METBF|GLUTAMATE 5-kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IQPIVSDNAC 10
+ PI+++N C
Sbjct: 143 VVPIINENDC 152


>sp|AROD_METM7|3-DEHYDROQUINATE dehydratase|Methanococcus maripaludis (strain C7 /

Query: 3 PIVSDNAC 10
P++ +N C
Sbjct: 5 PVIDENVC 12


>sp|PROB_METMA|GLUTAMATE 5-kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IQPIVSDNAC 10
+ PI+++N C
Sbjct: 143 VVPIINENDC 152


>sp|PROB_METAC|GLUTAMATE 5-kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IQPIVSDNAC 10
+ PI+++N C
Sbjct: 143 VVPIINENDC 152


>sp|FLAH_METVO|ARCHAEAL flagellar ATP-binding protein FlaH|Methanococcus voltae

Query: 1 IQPIVSDN 8
+ P++SDN
Sbjct: 92 VYPLISDN 99




213|SequenceR|1070|1061|TGPGCIQPIV

>sp|RBL_THEKO|RIBULOSE bisphosphate carboxylase|Thermococcus kodakarensis (strain ATCC

Query: 3 PGCIQPIV 10
PG IQP++
Sbjct: 372 PGNIQPVI 379


>sp|Y085_METJA|UNCHARACTERIZED lipoprotein MJ0085|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GPGCIQPIV 10
GPGC++ IV
Sbjct: 63 GPGCLRLIV 71


>sp|ACD2_ARCFU|ACETATE--COA ligase [ADP-forming] II|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TGPGCIQ 7
TG GC+Q
Sbjct: 522 TGSGCVQ 528


>sp|PYRE_NATPD|OROTATE phosphoribosyltransferase|Natronomonas pharaonis (strain ATCC

Query: 1 TGPGCIQPI 9
T PGC++ I
Sbjct: 40 TDPGCLRQI 48


>sp|THYX_SACS2|FLAVIN-DEPENDENT thymidylate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TGPGCI 6
TGP CI
Sbjct: 200 TGPNCI 205


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii (strain

Query: 3 PGCIQPIV 10
P C+ PIV
Sbjct: 409 PSCLIPIV 416


>sp|PURP_METS3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanobrevibacter smithii (strain ATCC

Query: 2 GPGCIQPIV 10
GP C+Q +V
Sbjct: 294 GPFCMQTLV 302


>sp|PURP_METS5|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Metallosphaera sedula (strain ATCC

Query: 2 GPGCIQPIV 10
GP C++ IV
Sbjct: 263 GPFCLESIV 271


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TGPGCIQP 8
TG G +QP
Sbjct: 271 TGKGIVQP 278


>sp|EF1A_METBU|ELONGATION factor 1-alpha|Methanococcoides burtonii (strain DSM 6242

Query: 1 TGPGCIQPI 9
T P CI+P+
Sbjct: 384 TRPMCIEPV 392


>sp|Y4618_METAC|UPF0313 protein MA_4618|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TGPGCIQP 8
TG G +QP
Sbjct: 389 TGKGIVQP 396




214|SequenceR|1075|1066|FPTLWTGPGC

>sp|RS9_HALMA|SMALL ribosomal subunit protein uS9|Haloarcula marismortui (strain ATCC

Query: 2 PTLWTGPG 9
P W GPG
Sbjct: 115 PKKWGGPG 122


>sp|THYX_AERPE|FLAVIN-DEPENDENT thymidylate synthase|Aeropyrum pernix (strain ATCC 700893

Query: 5 WTGPGC 10
W GP C
Sbjct: 263 WAGPSC 268


>sp|Y1056_PYRAR|UPF0282 protein Pars_1056|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PTLWTGPG 9
P LW GP
Sbjct: 153 PPLWHGPA 160


>sp|DCDA_ARCFU|DIAMINOPIMELATE decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PTLWTGPG 9
P LW PG
Sbjct: 269 PQLWLEPG 276


>sp|Y1289_ARCFU|PUTATIVE GTPase AF_1289|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LWTGPG 9
LWT PG
Sbjct: 109 LWTDPG 114


>sp|Y021_PYRIL|UPF0282 protein Pisl_0021|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PTLWTGPG 9
P LW GP
Sbjct: 153 PPLWHGPA 160


>sp|APBC_PYRHO|IRON-SULFUR cluster carrier protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PTLWTGP 8
P +W GP
Sbjct: 125 PVIWRGP 131


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PTLWTGP 8
P +W GP
Sbjct: 125 PVIWRGP 131


>sp|RL4_PYRAE|LARGE ribosomal subunit protein uL4|Pyrobaculum aerophilum (strain ATCC

Query: 3 TLWTGPG 9
TLWT P
Sbjct: 268 TLWTAPA 274


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM 14266

Query: 2 PTLWTGP 8
P +W GP
Sbjct: 126 PIIWRGP 132


>sp|FRHA_METBF|COENZYME F420 hydrogenase subunit alpha|Methanosarcina barkeri (strain

Query: 2 PTLWTGPGC 10
PT W P C
Sbjct: 402 PTTWNFPTC 410


>sp|Y934_PYRNV|UPF0282 protein Tneu_0934|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PTLWTGPG 9
P LW GP
Sbjct: 153 PPLWHGPA 160


>sp|GLMM_METVS|PHOSPHOGLUCOSAMINE mutase|Methanococcus vannielii (strain ATCC 35089

Query: 2 PTLWTGPGC 10
P L+T GC
Sbjct: 175 PNLFTNAGC 183


>sp|NUCS_PYRAE|ENDONUCLEASE NucS|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PTLWTGPG 9
P +W PG
Sbjct: 73 PKIWNPPG 80


>sp|Y2111_ARCFU|UPF0056 membrane protein AF_2111|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LWTGPG 9
L+TGPG
Sbjct: 125 LYTGPG 130


>sp|FLAK_HALMA|PREFLAGELLIN peptidase|Haloarcula marismortui (strain ATCC 43049

Query: 3 TLWTGP 8
T+WTGP
Sbjct: 52 TVWTGP 57


>sp|Y1393_METJA|UNCHARACTERIZED protein MJ1393|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TLWTGP 8
TLW GP
Sbjct: 219 TLWDGP 224


>sp|DPCKG_AERPE|GTP-DEPENDENT dephospho-CoA kinase|Aeropyrum pernix (strain ATCC 700893

Query: 3 TLWTGP 8
T WTGP
Sbjct: 62 TAWTGP 67




215|SequenceR|1080|1071|YVAQLFPTLW

>sp|MTRC_METM7|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain

Query: 1 YVAQLFPTL 9
YVAQLFP++
Sbjct: 31 YVAQLFPSV 39


>sp|SYDND_SACS2|ASPARTATE--TRNA(ASP/ASN) ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 AQLFPTLW 10
AQLFP L+
Sbjct: 170 AQLFPVLY 177


>sp|Y021_METJA|PUTATIVE glycyl-radical enzyme activating enzyme|Methanocaldococcus

Query: 1 YVAQLFPT 8
Y+++L+PT
Sbjct: 346 YISELYPT 353


>sp|MTRC_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain

Query: 1 YVAQLFPTL 9
YVAQ P+L
Sbjct: 31 YVAQFVPSL 39


>sp|SYDND_SULTO|ASPARTATE--TRNA(ASP/ASN) ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 AQLFPTLW 10
AQLFP ++
Sbjct: 170 AQLFPVIY 177


>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 YVAQLFP 7
Y+AQL P
Sbjct: 346 YIAQLLP 352


>sp|MTRC_METM5|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain

Query: 1 YVAQLFPT 8
Y+A FP+
Sbjct: 31 YIAHFFPS 38


>sp|KATG_NATPD|CATALASE-PEROXIDASE pharaonis (strain ATCC 35678

Query: 2 VAQLFPTLW 10
VAQL T W
Sbjct: 442 VAQLVKTAW 450




216|SequenceR|1085|1076|YQVFLYVAQL

>sp|LEU1_SULAC|2-ISOPROPYLMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 YQVFLYVAQL 10
Y+V YVA+L
Sbjct: 265 YEVSRYVAEL 274




217|SequenceR|1090|1081|NVMIIYQVFL

***** No hits found ******


218|SequenceR|1095|1086|FAILLNVMII

***** No hits found ******


219|SequenceR|1100|1091|YVNNFFAILL

>sp|Y2141_ARCFU|UNCHARACTERIZED protein AF_2141|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VNNFFAILL 10
+N FFA+LL
Sbjct: 216 INRFFAMLL 224


>sp|RUBY_METJA|PUTATIVE rubrerythrin|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VNNFFAI 8
+NNFF I
Sbjct: 2 INNFFVI 8


>sp|HEM1_SULTO|GLUTAMYL-TRNA reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YVNNFFAIL 9
Y+NN F IL
Sbjct: 388 YINNIFEIL 396




220|SequenceR|1105|1096|AKVQLYVNNF

>sp|HTPX1_SULAC|PROTEASE HtpX homolog 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 AKVQLYVNN 9
AK+Q+Y N
Sbjct: 235 AKIQIYAQN 243


>sp|OGT_SULAC|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 VQLYVNNF 10
V L+VNNF
Sbjct: 64 VDLFVNNF 71


>sp|GUAAA_SULAC|GMP synthase [glutamine-hydrolyzing] subunit A|Sulfolobus

Query: 1 AKVQLYVNN 9
AKVQ VNN
Sbjct: 148 AKVQAMVNN 156


>sp|GATE_PYRFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AKVQLYVNNF 10
AKV+ YV F
Sbjct: 457 AKVEKYVKEF 466


>sp|IF2B_METMP|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain DSM

Query: 2 KVQLYVNNF 10
K+Q YVN +
Sbjct: 94 KIQNYVNEY 102


>sp|IF2B_METVS|TRANSLATION initiation factor 2 subunit|Methanococcus vannielii (strain ATCC

Query: 2 KVQLYVNNF 10
K+Q YVN +
Sbjct: 94 KIQNYVNEY 102


>sp|IF2B_METM7|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C7 /

Query: 2 KVQLYVNNF 10
K+Q YVN +
Sbjct: 94 KIQNYVNEY 102


>sp|IF2B_METM6|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C6 /

Query: 2 KVQLYVNNF 10
K+Q YVN +
Sbjct: 94 KIQNYVNEY 102




221|SequenceR|1110|1101|VINSIAKVQL

>sp|T2M2_METJA|TYPE II restriction enzyme MjaII|Methanocaldococcus jannaschii (strain

Query: 1 VINSIAK 7
+INSIAK
Sbjct: 261 IINSIAK 267


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 INSIAKVQL 10
INS+AK+ +
Sbjct: 691 INSVAKIAI 699


>sp|PSA_THEAC|PROTEASOME subunit alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 NSIAKVQL 10
NSI K+QL
Sbjct: 62 NSIEKIQL 69




222|SequenceR|1115|1106|RQYKWVINSI

>sp|RS4E_SULAC|SMALL ribosomal subunit protein eS4|Sulfolobus acidocaldarius (strain

Query: 1 RQYKWVINS 9
++YKW+I S
Sbjct: 18 KEYKWIIRS 26


>sp|PDXT_PYRAE|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrobaculum aerophilum (strain

Query: 3 YKWVIN 8
+KWVIN
Sbjct: 193 HKWVIN 198


>sp|GUAAB_METJA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanocaldococcus

Query: 1 RQYKWVI 7
R+Y W++
Sbjct: 249 REYNWIV 255


>sp|SYT_THEPD|THREONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 QYKWVIN 8
+Y WVIN
Sbjct: 406 KYYWVIN 412


>sp|SAHH_AERPE|ADENOSYLHOMOCYSTEINASE pernix (strain ATCC 700893

Query: 2 QYKWVINSI 10
+YKW ++++
Sbjct: 107 EYKWALSTV 115


>sp|RS4E_DESA1|SMALL ribosomal subunit protein eS4|Desulfurococcus amylolyticus

Query: 1 RQYKWVINS 9
++Y+WV+ S
Sbjct: 24 KEYRWVVKS 32


>sp|GUAAB_METM7|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcus

Query: 1 RQYKWVI 7
R Y WV+
Sbjct: 249 RDYNWVV 255


>sp|GUAAB_METMP|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcus

Query: 1 RQYKWVI 7
R Y WV+
Sbjct: 249 RDYNWVV 255


>sp|Y1194_METTH|PROBABLE deacetylase MTH_1194|Methanothermobacter thermautotrophicus (strain

Query: 1 RQYKWVINSI 10
R+Y W++ I
Sbjct: 215 REYLWILGMI 224


>sp|RS4E_METTH|SMALL ribosomal subunit protein eS4|Methanothermobacter

Query: 1 RQYKWVI 7
++YKW +
Sbjct: 24 KEYKWTV 30


>sp|GUAAB_METVS|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcus vannielii

Query: 1 RQYKWVI 7
R Y WV+
Sbjct: 249 RDYNWVV 255


>sp|SYT_PYRAR|THREONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 RQYKWVIN 8
++Y WV+N
Sbjct: 406 QKYYWVLN 413


>sp|RS4E_SACI7|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 1 RQYKWVI 7
+QYKW +
Sbjct: 18 KQYKWTV 24


>sp|RS4E_SACI6|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 1 RQYKWVI 7
+QYKW +
Sbjct: 18 KQYKWTV 24


>sp|RS4E_SACI4|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 1 RQYKWVI 7
+QYKW +
Sbjct: 18 KQYKWTV 24


>sp|RS4E_SACI3|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 1 RQYKWVI 7
+QYKW +
Sbjct: 18 KQYKWTV 24


>sp|RS4E_SACI2|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 1 RQYKWVI 7
+QYKW +
Sbjct: 18 KQYKWTV 24


>sp|RS4E_SACI1|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 1 RQYKWVI 7
+QYKW +
Sbjct: 18 KQYKWTV 24


>sp|RS4E_METS5|SMALL ribosomal subunit protein eS4|Metallosphaera sedula (strain ATCC

Query: 1 RQYKWVINS 9
++YKW + +
Sbjct: 18 KEYKWTVRA 26


>sp|SYT_PYRCJ|THREONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 RQYKWVIN 8
++Y WV+N
Sbjct: 405 QKYYWVLN 412


>sp|RS4E_SACS2|SMALL ribosomal subunit protein eS4|Saccharolobus solfataricus (strain

Query: 1 RQYKWVI 7
+QYKW +
Sbjct: 18 KQYKWTV 24


>sp|SYT_PYRNV|THREONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 RQYKWVIN 8
++Y WV+N
Sbjct: 407 QKYYWVLN 414


>sp|RS4E_AERPE|SMALL ribosomal subunit protein eS4|Aeropyrum pernix (strain ATCC

Query: 1 RQYKWVI 7
++YKW +
Sbjct: 24 KEYKWAV 30


>sp|SYT_PYRAE|THREONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RQYKWVIN 8
++Y WV+N
Sbjct: 406 QKYYWVLN 413


>sp|Y34A_METJA|UNCHARACTERIZED protein MJ0347.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RQYKWVINS 9
+QY++ INS
Sbjct: 66 QQYEYTINS 74


>sp|SYT_PYRIL|THREONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 RQYKWVIN 8
++Y WV+N
Sbjct: 407 QKYYWVLN 414




223|SequenceR|1120|1111|MIFHYRQYKW

>sp|AATA_METS5|A-TYPE ATP synthase subunit A|Metallosphaera sedula (strain ATCC 51363

Query: 1 MIFHYRQY 8
+I+HY QY
Sbjct: 525 LIYHYNQY 532


>sp|HIS6_METBF|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina barkeri (strain

Query: 2 IFHYRQY 8
IFH+R+Y
Sbjct: 249 IFHFREY 255


>sp|HIS6_METJA|IMIDAZOLE glycerol phosphate synthase subunit|Methanocaldococcus jannaschii

Query: 2 IFHYRQY 8
I HYR+Y
Sbjct: 247 ILHYREY 253


>sp|HIS6_META3|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus aeolicus (strain

Query: 2 IFHYRQY 8
I HYR+Y
Sbjct: 251 ILHYREY 257


>sp|RS11_HYPBU|SMALL ribosomal subunit protein uS11|Hyperthermus butylicus (strain DSM

Query: 1 MIFHYRQYKW 10
M+F R+ KW
Sbjct: 1 MVFSAREIKW 10


>sp|IF2P_PYRIL|PROBABLE translation initiation factor IF-2|Pyrobaculum islandicum (strain

Query: 2 IFHYRQY 8
+F YRQY
Sbjct: 564 LFQYRQY 570


>sp|IF2P_PYRAE|PROBABLE translation initiation factor IF-2|Pyrobaculum aerophilum (strain

Query: 2 IFHYRQY 8
+F YRQY
Sbjct: 565 LFQYRQY 571


>sp|HIS6_METS3|IMIDAZOLE glycerol phosphate synthase subunit|Methanobrevibacter smithii

Query: 2 IFHYRQY 8
IFH+ QY
Sbjct: 250 IFHFNQY 256


>sp|HIS6_ARCFU|IMIDAZOLE glycerol phosphate synthase subunit|Archaeoglobus fulgidus (strain

Query: 2 IFHYRQ 7
IFHYR+
Sbjct: 247 IFHYRE 252


>sp|SECD_THEGJ|PROTEIN-EXPORT membrane protein SecD|Thermococcus gammatolerans (strain DSM 15229

Query: 3 FHYRQYK 9
FHYR+++
Sbjct: 386 FHYRRWR 392


>sp|GCSPB_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 5 YRQYKW 10
YRQ KW
Sbjct: 2 YRQAKW 7


>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 3 FHYRQYKW 10
F Y+Q KW
Sbjct: 453 FAYQQDKW 460


>sp|THIM_PYRHO|HYDROXYETHYLTHIAZOLE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 FHYRQYKW 10
FH + Y W
Sbjct: 238 FHVKLYDW 245


>sp|THIM_PYRAB|HYDROXYETHYLTHIAZOLE kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 FHYRQYKW 10
FH + Y W
Sbjct: 238 FHVKLYDW 245


>sp|GLPK2_SULAC|GLYCEROL kinase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 MIFHYRQYKW 10
M+F+ R+ +W
Sbjct: 189 MLFNIRKLEW 198


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 HYRQYKW 10
HY QY W
Sbjct: 157 HYLQYAW 163




224|SequenceR|1125|1116|KEHYAMIFHY

>sp|SYT_METS3|THREONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KEHYAMIFH 9
KEHY I H
Sbjct: 451 KEHYPTILH 459


>sp|METK_THEVO|S-ADENOSYLMETHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 EHYAMIFHY 10
EHY I H+
Sbjct: 52 EHYGRILHH 60


>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 KEHYAMIFH 9
KEHY +I H
Sbjct: 455 KEHYPVIIH 463


>sp|Y672_PYRHO|UPF0252 protein PH0672|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 YAMIFHY 10
Y MIFH+
Sbjct: 122 YLMIFHF 128


>sp|METK_THEAC|S-ADENOSYLMETHIONINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 EHYAMIFHY 10
EHY I H+
Sbjct: 52 EHYGRILHH 60


>sp|METK_PYRCJ|S-ADENOSYLMETHIONINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 EHYAMIFHY 10
EH+ +I H+
Sbjct: 49 EHFGVILHH 57


>sp|METK_PYRIL|S-ADENOSYLMETHIONINE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 EHYAMIFHY 10
EH+ +I H+
Sbjct: 49 EHFGIILHH 57


>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 3 HYAMIFHY 10
HY M +H+
Sbjct: 334 HYIMAYHW 341


>sp|Y3100_HALMA|PUTATIVE heme-binding protein rrnAC3100|Haloarcula marismortui (strain ATCC

Query: 4 YAMIFH 9
YA++FH
Sbjct: 380 YALVFH 385




225|SequenceR|1130|1121|PPLVPKEHYA

>sp|Y3508_METJA|PROBABLE helicase MJECL08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PPLVPKEHYA 10
P LVP+EH A
Sbjct: 219 PILVPEEHLA 228


>sp|G3P_METBR|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium bryantii

Query: 1 PPLVPKEH 8
PP VP H
Sbjct: 188 PPTVPSHH 195


>sp|G3P_META3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PPLVPKEH 8
PP VP H
Sbjct: 188 PPTVPSHH 195


>sp|Y539_THEKO|PUTATIVE HTH-type transcriptional regulatory protein|Thermococcus

Query: 2 PLVPKE 7
PL+PKE
Sbjct: 285 PLIPKE 290


>sp|G3P_METFO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium formicicum

Query: 1 PPLVPKEH 8
PP VP H
Sbjct: 188 PPTVPSHH 195


>sp|COFG_METM5|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C5 /

Query: 2 PLVPKEHY 9
PL+P E+Y
Sbjct: 239 PLIPMENY 246


>sp|LEUC_THEKO|3-ISOPROPYLMALATE dehydratase large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 PPLVPKEHY 9
PP+V K H+
Sbjct: 231 PPMVAKPHH 239


>sp|DAPA_METVS|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PPLVPKEH 8
P L PKEH
Sbjct: 47 PTLTPKEH 54


>sp|Y1316_THEGJ|PUTATIVE HTH-type transcriptional regulatory protein|Thermococcus

Query: 2 PLVPKE 7
PL+PKE
Sbjct: 286 PLIPKE 291


>sp|G3P_METTH|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PPLVPKEH 8
PP VP H
Sbjct: 187 PPTVPSHH 194


>sp|RIBL_NATPD|FAD synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PPLVPKEH 8
PP+VP E
Sbjct: 46 PPIVPDEQ 53


>sp|G3P_METS3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PPLVPKEH 8
PP VP H
Sbjct: 188 PPKVPSHH 195


>sp|RS2_METB6|SMALL ribosomal subunit protein uS2|Methanoregula boonei (strain DSM

Query: 2 PLVPKEHY 9
PL+P E Y
Sbjct: 14 PLIPVEEY 21


>sp|IF2P_METVS|PROBABLE translation initiation factor IF-2|Methanococcus vannielii (strain

Query: 3 LVPKEH 8
+VPKEH
Sbjct: 328 IVPKEH 333


>sp|Y966_METJA|UNCHARACTERIZED protein MJ0966|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PLVPKEH 8
P++PK H
Sbjct: 346 PMIPKPH 352


>sp|AATB_STAMF|A-TYPE ATP synthase subunit B|Staphylothermus marinus (strain ATCC 43588

Query: 1 PPLVPKEH 8
PP+VP+++
Sbjct: 107 PPIVPEDY 114


>sp|ISCS_METTE|CYSTEINE desulfurase IscS|Methanosarcina thermophila

Query: 2 PLVPKEH 8
PL PKE+
Sbjct: 395 PLTPKEY 401


>sp|MRE11_PYRFU|DNA double-strand break repair protein|Pyrococcus furiosus (strain ATCC

Query: 2 PLVPKEHY 9
PL+PK Y
Sbjct: 294 PLIPKNAY 301


>sp|NIFK_METTH|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter

Query: 4 VPKEHY 9
+PKEH+
Sbjct: 264 IPKEHH 269


>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 2 PLVPKEH 8
PLVP EH
Sbjct: 2 PLVPLEH 8


>sp|NPD_CALMQ|NAD-DEPENDENT protein deacetylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 PLVPKEH 8
PLV KEH
Sbjct: 206 PLVVKEH 212


>sp|Y866_METJA|UNCHARACTERIZED HIT-like protein MJ0866|Methanocaldococcus jannaschii (strain

Query: 3 LVPKEHY 9
+VPK+HY
Sbjct: 39 VVPKKHY 45




226|SequenceR|1135|1126|LIILPPPLVP

>sp|SYP_HALMA|PROLINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 IILPPPLVP 10
++LPP L P
Sbjct: 283 LVLPPALAP 291


>sp|ATGT_METS3|TRNA-GUANINE(15) transglycosylase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LIILPPPLVP 10
L+ILPP P
Sbjct: 391 LVILPPSRKP 400


>sp|SYP_NATPD|PROLINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 IILPPPLVP 10
+++PP L P
Sbjct: 282 LVIPPALAP 290


>sp|SYP_PYRAR|PROLINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 ILPPPLVP 10
+LPP L P
Sbjct: 285 VLPPRLAP 292


>sp|SYFA_PYRCJ|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LIILPPPL 8
+++LPPPL
Sbjct: 1 MLVLPPPL 8


>sp|NURA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 2 IILPPPLV 9
+ILP PL+
Sbjct: 11 VILPNPLI 18


>sp|MPGP_PYRHO|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 LPPPLVP 10
+PP LVP
Sbjct: 129 MPPELVP 135


>sp|ACD1_ARCFU|ACETATE--COA ligase [ADP-forming] I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LIILPPPLVP 10
+I++P LVP
Sbjct: 67 IIVVPAKLVP 76




227|SequenceR|1140|1131|SVIHSLIILP

>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IHSLIILP 10
+H LI+LP
Sbjct: 72 VHHLILLP 79


>sp|Y521_ARCFU|UNCHARACTERIZED N-acetyltransferase AF_0521|Archaeoglobus fulgidus (strain ATCC

Query: 3 IHSLIILP 10
IH L +LP
Sbjct: 82 IHELFVLP 89


>sp|FRHA_METBF|COENZYME F420 hydrogenase subunit alpha|Methanosarcina barkeri (strain

Query: 3 IHSLIILP 10
+H+++ILP
Sbjct: 108 LHNILILP 115


>sp|Y349_METJA|UNCHARACTERIZED protein MJ0349|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VIHSLIIL 9
+IH+LIIL
Sbjct: 77 IIHTLIIL 84




228|SequenceR|1145|1136|ICCFLSVIHS

>sp|GSA_METTH|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 CCFLSVIH 9
CCF+S H
Sbjct: 392 CCFISAAH 399


>sp|ARLY_PYRFU|ARGININOSUCCINATE lyase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 CFLSVIHS 10
CFLSV+ S
Sbjct: 232 CFLSVLIS 239


>sp|Y1155_METJA|UPF0313 protein MJ1155|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CCFLSVIH 9
C F S++H
Sbjct: 303 CSFCSILH 310




229|SequenceR|1150|1141|KRRKCICCFL

>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 RRKCICC 8
RR+C+ C
Sbjct: 20 RRECVSC 26


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 RRKCICC 8
RR+C+ C
Sbjct: 20 RRECVSC 26


>sp|PNPH_KORCO|PROBABLE 6-oxopurine nucleoside phosphorylase|Korarchaeum cryptofilum

Query: 1 KRRKCIC 7
KRR+C C
Sbjct: 255 KRRECPC 261


>sp|KHSE_AERPE|HOMOSERINE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 5 CICC 8
CICC
Sbjct: 292 CICC 295


>sp|ACD1_ARCFU|ACETATE--COA ligase [ADP-forming] I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RKCICCFL 10
+ +CCF+
Sbjct: 392 KNAVCCFM 399


>sp|IF2G_METVS|TRANSLATION initiation factor 2 subunit|Methanococcus vannielii (strain ATCC

Query: 3 RKCICC 8
+KC CC
Sbjct: 71 KKCDCC 76


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RRKCIC 7
R KCIC
Sbjct: 420 RPKCIC 425


>sp|SYT_METJA|THREONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KRRKCICCFL 10
K +C+ CF+
Sbjct: 31 KLDECLACFI 40


>sp|CAS4_AERPE|CRISPR-ASSOCIATED exonuclease Cas4|Aeropyrum pernix (strain ATCC 700893

Query: 3 RKCICC 8
RKC+ C
Sbjct: 177 RKCVAC 182


>sp|MSRB_METTH|PEPTIDE methionine sulfoxide reductase MsrB|Methanothermobacter

Query: 4 KCICC 8
+CICC
Sbjct: 63 RCICC 67




230|SequenceR|1155|1146|STKDKKRRKC

>sp|DEOC_HALLT|DEOXYRIBOSE-PHOSPHATE aldolase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 TKDKKRRKC 10
+ D+KRR C
Sbjct: 131 SDDEKRRAC 139


>sp|DEOC_HALWD|DEOXYRIBOSE-PHOSPHATE aldolase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 DKKRRKC 10
D+KRR C
Sbjct: 136 DEKRRAC 142


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 TKDKKRRKC 10
T+D RR C
Sbjct: 31 TRDASRRTC 39


>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 TKDKKRRKC 10
TKDK+R C
Sbjct: 33 TKDKERNVC 41


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 TKDKKRRKC 10
T+DK+R C
Sbjct: 32 TQDKERNTC 40




231|SequenceR|1160|1151|LKPGDSTKDK

>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KPGDSTKDK 10
+PGD TKD+
Sbjct: 753 RPGDLTKDE 761


>sp|SYT_PYRNV|THREONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LKPGDSTKDK 10
KPGDS +K
Sbjct: 135 FKPGDSRAEK 144


>sp|DFX_ARCFU|DESULFOFERRODOXIN homolog|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LKPGDSTK 8
LKPGD K
Sbjct: 93 LKPGDEPK 100


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KPGDSTKDK 10
+PGD TKD+
Sbjct: 380 RPGDLTKDE 388


>sp|Y534_METFV|UNCHARACTERIZED protein Mfer_0534|Methanothermus fervidus (strain ATCC 43054

Query: 3 PGDSTKD 9
PGD+TK+
Sbjct: 162 PGDATKE 168




232|SequenceR|1165|1156|EETLFLKPGD

>sp|GATE_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma acidophilum (strain ATCC

Query: 1 EETLFLKP 8
EET+FL+P
Sbjct: 399 EETVFLRP 406


>sp|CHEB2_METMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 2|Methanosarcina mazei

Query: 1 EETLFLKPGD 10
E T+F+ PGD
Sbjct: 243 EGTVFIAPGD 252


>sp|KHK_HALVD|KETOHEXOKINASE volcanii (strain ATCC 29605

Query: 2 ETLFLKPGD 10
ETL L PGD
Sbjct: 212 ETLLLDPGD 220


>sp|EF1A_IGNH4|ELONGATION factor 1-alpha|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EETLFLKPGD 10
E FLKPGD
Sbjct: 379 ENPSFLKPGD 388


>sp|RL21_STAMF|LARGE ribosomal subunit protein eL21|Staphylothermus marinus (strain

Query: 1 EETLFLKP 8
E+TLF++P
Sbjct: 84 EKTLFIRP 91


>sp|RL10_AERPE|LARGE ribosomal subunit protein uL10|Aeropyrum pernix (strain ATCC 700893

Query: 1 EETLFLKPGD 10
+ET+ KPGD
Sbjct: 164 KETVVAKPGD 173


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EETLFLKPGD 10
EET LKPG+
Sbjct: 54 EETAGLKPGE 63


>sp|AROA_THEVO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 ETLFLKPG 9
+ LF+KPG
Sbjct: 344 QDLFIKPG 351


>sp|SYE_METS5|GLUTAMATE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 4 LFLKPGD 10
+F+KPGD
Sbjct: 445 IFVKPGD 451


>sp|AROE_META3|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus aeolicus (strain ATCC

Query: 1 EETLFLK 7
+ETLFLK
Sbjct: 227 KETLFLK 233


>sp|AATA_METM7|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C7 /

Query: 1 EETLFLKPGD 10
EET +KPG+
Sbjct: 53 EETAGIKPGE 62


>sp|AATA_METM6|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C6 /

Query: 1 EETLFLKPGD 10
EET +KPG+
Sbjct: 53 EETAGIKPGE 62


>sp|AATA_METM5|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C5 /

Query: 1 EETLFLKPGD 10
EET +KPG+
Sbjct: 53 EETAGIKPGE 62


>sp|Y996_METJA|METALLOPROTEASE MJ0996|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 FLKPGD 10
F+KPGD
Sbjct: 343 FIKPGD 348


>sp|AATA_METST|A-TYPE ATP synthase subunit A|Methanosphaera stadtmanae (strain ATCC

Query: 1 EETLFLKPGD 10
EET +KPG+
Sbjct: 53 EETAGIKPGE 62


>sp|AATA_METMP|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain DSM

Query: 1 EETLFLKPGD 10
EET +KPG+
Sbjct: 53 EETAGIKPGE 62


>sp|AATA_METVS|A-TYPE ATP synthase subunit A|Methanococcus vannielii (strain ATCC 35089

Query: 1 EETLFLKPGD 10
EET +KPG+
Sbjct: 53 EETAGIKPGE 62


>sp|HJC_METTH|CROSSOVER junction endodeoxyribonuclease Hjc|Methanothermobacter

Query: 4 LFLKPGD 10
+FL PGD
Sbjct: 94 IFLSPGD 100


>sp|AATA_METBA|A-TYPE ATP synthase subunit A|Methanosarcina barkeri

Query: 1 EETLFLKPGD 10
EET +KPG+
Sbjct: 53 EETAGIKPGE 62


>sp|Y856_METTH|METALLOPROTEASE MTH_856|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 FLKPGD 10
+LKPGD
Sbjct: 343 YLKPGD 348


>sp|AATA_THESM|A-TYPE ATP synthase subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 1 EETLFLKPGD 10
EET +KPG+
Sbjct: 51 EETAGIKPGE 60


>sp|AATA_METBF|A-TYPE ATP synthase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 1 EETLFLKPGD 10
EET +KPG+
Sbjct: 53 EETAGIKPGE 62


>sp|AATA3_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain

Query: 1 EETLFLKPGD 10
EET+ L PG+
Sbjct: 55 EETIGLTPGE 64


>sp|AATA_THEGJ|A-TYPE ATP synthase subunit A|Thermococcus gammatolerans (strain DSM

Query: 1 EETLFLKPGD 10
EET +KPG+
Sbjct: 51 EETAGIKPGE 60


>sp|TFE_IGNH4|TRANSCRIPTION factor E|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 ETLFLKPGD 10
ETL +KP D
Sbjct: 42 ETLGMKPND 50


>sp|RL10_THEAC|LARGE ribosomal subunit protein uL10|Thermoplasma acidophilum (strain

Query: 1 EETLFLKPGD 10
+ET+F+K G+
Sbjct: 153 KETVFVKKGE 162


>sp|PCNA_THEFM|DNA polymerase sliding clamp|Thermococcus fumicolans

Query: 1 EETLFLKPGD 10
++TL LK GD
Sbjct: 86 KDTLILKKGD 95


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EETLFLKPGD 10
+E +F+K GD
Sbjct: 342 DELIFIKEGD 351


>sp|AATA_METTH|A-TYPE ATP synthase subunit A|Methanothermobacter thermautotrophicus

Query: 1 EETLFLKPGD 10
EET +KPG+
Sbjct: 54 EETAGIKPGE 63


>sp|AATA_PYRIL|A-TYPE ATP synthase subunit A|Pyrobaculum islandicum (strain DSM 4184

Query: 1 EETLFLKPGD 10
E+T LKPG+
Sbjct: 51 EDTTGLKPGE 60




233|SequenceR|1170|1161|LKKQDEETLF

>sp|AGLB1_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KQDEETLF 10
K D ETLF
Sbjct: 396 KSDNETLF 403


>sp|RL18_PYRFU|LARGE ribosomal subunit protein uL18|Pyrococcus furiosus (strain ATCC

Query: 1 LKKQDEE 7
LK+QDEE
Sbjct: 156 LKEQDEE 162


>sp|RL18_PYRAB|LARGE ribosomal subunit protein uL18|Pyrococcus abyssi (strain GE5 /

Query: 1 LKKQDEE 7
LK+QDEE
Sbjct: 156 LKEQDEE 162




234|SequenceR|1175|1166|EEFDHLKKQD

>sp|IF6_NITMS|TRANSLATION initiation factor 6|Nitrosopumilus maritimus (strain SCM1)

Query: 2 EFDHLKKQ 9
EFD LKK+
Sbjct: 79 EFDFLKKE 86


>sp|KPRS_METKA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanopyrus kandleri (strain AV19 /

Query: 2 EFDHLKKQ 9
E+DHL+K+
Sbjct: 182 EYDHLEKK 189


>sp|HEM1_NATPD|GLUTAMYL-TRNA reductase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EEFDHLKKQ 9
EEF+HL Q
Sbjct: 317 EEFEHLMTQ 325


>sp|LYSJ_SACS2|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Saccharolobus

Query: 3 FDHLKKQ 9
DHLKKQ
Sbjct: 51 IDHLKKQ 57


>sp|GSA_METAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 FDHLKKQD 10
D+LKK+D
Sbjct: 315 LDYLKKED 322


>sp|NADK_PYRAB|NAD kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 EEFDHLKKQD 10
E F H K++D
Sbjct: 40 EHFPHFKEED 49


>sp|ARGJ_METMP|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EEFDH 5
EEFDH
Sbjct: 249 EEFDH 253


>sp|RAD50_THEAC|DNA double-strand break repair Rad50|Thermoplasma acidophilum (strain

Query: 1 EEFDHLKKQ 9
EE DHL+++
Sbjct: 483 EEIDHLERE 491


>sp|HDRA_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanococcus

Query: 1 EEFDHLKKQD 10
+EFD KK++
Sbjct: 331 DEFDATKKEE 340


>sp|Y1289_ARCFU|PUTATIVE GTPase AF_1289|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EEFDHLKK 8
E FD++KK
Sbjct: 273 EHFDYMKK 280


>sp|MPTA_HALSA|GTP cyclohydrolase MptA|Halobacterium salinarum (strain ATCC 700922

Query: 1 EEFDHL 6
EEFDHL
Sbjct: 266 EEFDHL 271


>sp|MPTA_HALS3|GTP cyclohydrolase MptA|Halobacterium salinarum (strain ATCC 29341

Query: 1 EEFDHL 6
EEFDHL
Sbjct: 266 EEFDHL 271




235|SequenceR|1180|1171|MEVCQEEFDH

>sp|ARGJ_METMP|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 4 CQEEFDH 10
C+EEFDH
Sbjct: 247 CKEEFDH 253


>sp|ATGT_METBF|TRNA-GUANINE(15) transglycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 3 VCQEEFDH 10
+C+EEF H
Sbjct: 462 ICEEEFKH 469


>sp|ATGT_METAC|TRNA-GUANINE(15) transglycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 VCQEEFDH 10
+C++EF+H
Sbjct: 462 ICEKEFEH 469


>sp|ATGT_METMA|TRNA-GUANINE(15) transglycosylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VCQEEFDH 10
+C++EF H
Sbjct: 462 ICEKEFQH 469


>sp|Y620_METKA|UPF0425 pyridoxal phosphate-dependent protein MK0620|Methanopyrus

Query: 2 EVCQEEFD 9
E+C+E FD
Sbjct: 69 ELCREHFD 76


>sp|MTBB3_METMA|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MEVCQE 6
MEVCQ+
Sbjct: 134 MEVCQQ 139


>sp|MTBB3_METBA|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina barkeri

Query: 1 MEVCQE 6
MEVCQ+
Sbjct: 86 MEVCQQ 91


>sp|MTBB3_METAC|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina acetivorans (strain ATCC

Query: 1 MEVCQE 6
MEVCQ+
Sbjct: 134 MEVCQQ 139


>sp|MTBB2_METMA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MEVCQE 6
MEVCQ+
Sbjct: 134 MEVCQQ 139


>sp|MTBB2_METBF|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri (strain Fusaro /

Query: 1 MEVCQE 6
MEVCQ+
Sbjct: 134 MEVCQQ 139


>sp|MTBB2_METBA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri

Query: 1 MEVCQE 6
MEVCQ+
Sbjct: 86 MEVCQQ 91


>sp|MTBB2_METAC|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina acetivorans (strain ATCC

Query: 1 MEVCQE 6
MEVCQ+
Sbjct: 134 MEVCQQ 139


>sp|MTBB1_METMA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MEVCQE 6
MEVCQ+
Sbjct: 134 MEVCQQ 139


>sp|MTBB1_METBA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri

Query: 1 MEVCQE 6
MEVCQ+
Sbjct: 134 MEVCQQ 139


>sp|MTBB1_METBF|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri (strain Fusaro /

Query: 1 MEVCQE 6
MEVCQ+
Sbjct: 134 MEVCQQ 139


>sp|MTBB1_METAC|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina acetivorans (strain ATCC

Query: 1 MEVCQE 6
MEVCQ+
Sbjct: 134 MEVCQQ 139


>sp|Y1127_METTP|PUTATIVE nickel insertion protein|Methanothrix thermoacetophila (strain

Query: 1 MEVCQEEFDH 10
+EV + FDH
Sbjct: 42 LEVNERRFDH 51


>sp|SYH_METMJ|HISTIDINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 EVCQEEFDH 10
EVC +F+H
Sbjct: 37 EVCTPDFEH 45


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 1 MEVCQEEFDH 10
+EV + FDH
Sbjct: 904 LEVYERSFDH 913


>sp|Y202_METJA|UNCHARACTERIZED protein MJ0202|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MEVCQEEF 8
+E C EEF
Sbjct: 238 LEECSEEF 245




236|SequenceR|1185|1176|KENFYMEVCQ

>sp|MFNA_METM7|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 1 KENFYMEVCQ 10
+EN+Y+ VC+
Sbjct: 344 EENWYVSVCR 353


>sp|MFNA_METM5|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 1 KENFYMEVCQ 10
+EN+Y+ VC+
Sbjct: 344 EENWYVSVCR 353


>sp|MFNA_METMP|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 2 ENFYMEVCQ 10
EN+Y+ VC+
Sbjct: 345 ENWYVSVCR 353


>sp|CUTA_SULAC|GLYCERALDEHYDE dehydrogenase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 4 FYMEVC 9
FY+E+C
Sbjct: 449 FYLEIC 454


>sp|Y1661_ARCFU|UNCHARACTERIZED protein AF_1661|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 YMEVCQ 10
YME CQ
Sbjct: 202 YMEACQ 207


>sp|THTR_METTH|PUTATIVE thiosulfate sulfurtransferase|Methanothermobacter

Query: 1 KENFYME 7
KE+FY+E
Sbjct: 152 KEDFYIE 158


>sp|CBID_METS3|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 KENFYMEVC 9
+EN +++VC
Sbjct: 313 EENLHLDVC 321


>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 2 ENFYMEVCQ 10
EN Y+ CQ
Sbjct: 475 ENSYIAACQ 483


>sp|RF1_HALWD|PEPTIDE chain release factor subunit|Haloquadratum walsbyi (strain DSM

Query: 2 ENFYMEV 8
+NFY EV
Sbjct: 201 DNFYQEV 207


>sp|RF1_HALMA|PEPTIDE chain release factor subunit|Haloarcula marismortui (strain ATCC

Query: 2 ENFYMEV 8
+NFY EV
Sbjct: 201 DNFYQEV 207


>sp|COABC_METJA|COENZYME A biosynthesis bifunctional protein|Methanocaldococcus jannaschii

Query: 1 KENFYMEV 8
KE FY+EV
Sbjct: 233 KEGFYVEV 240


>sp|RF1_HALVD|PEPTIDE chain release factor subunit|Haloferax volcanii (strain ATCC 29605

Query: 2 ENFYMEV 8
+NFY EV
Sbjct: 201 DNFYQEV 207


>sp|RF1_HALSA|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 2 ENFYMEV 8
+NFY EV
Sbjct: 201 DNFYQEV 207


>sp|RF1_HALS3|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 2 ENFYMEV 8
+NFY EV
Sbjct: 201 DNFYQEV 207


>sp|RF1_HALLT|PEPTIDE chain release factor subunit|Halorubrum lacusprofundi (strain ATCC

Query: 2 ENFYMEV 8
+NFY EV
Sbjct: 201 DNFYQEV 207


>sp|Y3936_METAC|UPF0060 membrane protein MA_3936|Methanosarcina acetivorans (strain ATCC

Query: 1 KENFYMEVC 9
K NFY+ C
Sbjct: 138 KHNFYLFFC 146




237|SequenceR|1190|1181|HFKDDKENFY

>sp|Y818_PYRAE|MEMO1 family protein PAE0818|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 HFKDDKENFY 10
HFK+ +++FY
Sbjct: 121 HFKEVEDDFY 130


>sp|MVHA_METTH|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter thermautotrophicus

Query: 1 HFKDDKENF 9
HFK+ +ENF
Sbjct: 311 HFKEFRENF 319


>sp|CSG_METJA|S-LAYER protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FKDDKENF 9
+KDD+ENF
Sbjct: 217 YKDDEENF 224


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 3 KDDKENF 9
KDDKE F
Sbjct: 138 KDDKEKF 144


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 1 HFKDDKENFY 10
+F D+E+FY
Sbjct: 283 NFDGDQEDFY 292


>sp|CORA_METJA|COBALT/MAGNESIUM transport protein CorA|Methanocaldococcus jannaschii (strain ATCC

Query: 3 KDDKENF 9
K+D+ENF
Sbjct: 211 KEDRENF 217


>sp|Y662_METJA|UNCHARACTERIZED protein MJ0662|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HFKDDK 6
HFKD+K
Sbjct: 157 HFKDEK 162


>sp|RL11_METMJ|LARGE ribosomal subunit protein uL11|Methanoculleus marisnigri (strain

Query: 4 DDKENF 9
DDK+NF
Sbjct: 57 DDKKNF 62


>sp|Y138_METJA|PUTATIVE glutamine amidotransferase-like protein MJ0138|Methanocaldococcus

Query: 1 HFKDDKENF 9
H KD+++NF
Sbjct: 460 HIKDEEDNF 468


>sp|PCNA_ARCFU|DNA polymerase sliding clamp|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FKDDKENF 9
F+ DKE F
Sbjct: 154 FRSDKEGF 161


>sp|TOP6B_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 1 HFKDDKENF 9
HFK ENF
Sbjct: 366 HFKKIPENF 374




238|SequenceR|1195|1186|EESGSHFKDD

>sp|HPRT_METOI|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothermococcus okinawensis (strain

Query: 1 EESGSHFKD 9
E++G+H KD
Sbjct: 137 EKAGAHIKD 145


>sp|YPZ6_METTF|UNCHARACTERIZED protein ORF6'|Methanothermobacter thermautotrophicus

Query: 1 EESGSHFKDD 10
EE+G HF+ D
Sbjct: 88 EEAGEHFELD 97


>sp|DEOC_PYRNV|DEOXYRIBOSE-PHOSPHATE aldolase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 ESGSHF 7
ESG+HF
Sbjct: 139 ESGAHF 144


>sp|DEOC_PYRIL|DEOXYRIBOSE-PHOSPHATE aldolase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 ESGSHF 7
ESG+HF
Sbjct: 139 ESGAHF 144


>sp|DEOC_PYRAR|DEOXYRIBOSE-PHOSPHATE aldolase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 ESGSHF 7
ESG+HF
Sbjct: 139 ESGAHF 144


>sp|ATGT_METBF|TRNA-GUANINE(15) transglycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EESGSHFKD 9
E++ SH KD
Sbjct: 175 EKAASHLKD 183


>sp|Y1544_METJA|UNCHARACTERIZED protein MJ1544|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 HFKDD 10
HFKDD
Sbjct: 74 HFKDD 78


>sp|ATGT_METMA|TRNA-GUANINE(15) transglycosylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EESGSHFKD 9
E++ SH KD
Sbjct: 175 EKAASHLKD 183


>sp|YPV6_METTF|UNCHARACTERIZED protein ORF6|Methanothermobacter thermautotrophicus

Query: 1 EESGSHFKDD 10
EE G HF+ D
Sbjct: 88 EEGGEHFELD 97


>sp|LEU1_ARCFU|PROBABLE 2-isopropylmalate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 1 EESGSHFKDD 10
EE+G H D+
Sbjct: 335 EEAGYHLDDE 344




239|SequenceR|1200|1191|TVRIREESGS

>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 3 RIREESG 9
RIREESG
Sbjct: 96 RIREESG 102


>sp|NSR_THEKO|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Thermococcus kodakarensis

Query: 2 VRIREESG 9
VR+REE G
Sbjct: 90 VRVREEDG 97


>sp|AROD_PYRAE|3-DEHYDROQUINATE dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 TVRIREESG 9
TVR REE G
Sbjct: 61 TVRRREEGG 69


>sp|ATRMA_PYRFU|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus furiosus (strain

Query: 1 TVRIREESG 9
T +IRE+SG
Sbjct: 163 TWKIREDSG 171


>sp|Y1147_METJA|UNCHARACTERIZED protein MJ1147|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VRIREESGS 10
+RI+E+SG+
Sbjct: 281 LRIKEDSGN 289


>sp|COAD_METBF|PHOSPHOPANTETHEINE adenylyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 3 RIREESG 9
RIREE G
Sbjct: 108 RIREEKG 114


>sp|SYT_METMA|THREONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VRIREESG 9
V IREESG
Sbjct: 584 VTIREESG 591


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 2 VRIREESG 9
VRI EE+G
Sbjct: 427 VRINEETG 434


>sp|GPDA_METTH|GLYCEROL-3-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothermobacter thermautotrophicus

Query: 4 IREESGS 10
IREE+GS
Sbjct: 118 IREETGS 124




240|SequenceR|1205|1196|EVREFTVRIR

>sp|TRPD_HALLT|ANTHRANILATE phosphoribosyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 1 EVREFTV 7
EVREFT+
Sbjct: 241 EVREFTI 247


>sp|SAHH_THEVO|ADENOSYLHOMOCYSTEINASE volcanium (strain ATCC 51530

Query: 1 EVREFTVRIR 10
EVREF R R
Sbjct: 306 EVREFVKRYR 315


>sp|DNLJ_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 EVREFTVRIR 10
+VREF R+R
Sbjct: 116 DVREFDSRVR 125


>sp|SAHH_THEAC|ADENOSYLHOMOCYSTEINASE acidophilum (strain ATCC 25905

Query: 1 EVREFTVRIR 10
EVREF R R
Sbjct: 306 EVREFVKRYR 315


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 2 VREFTVRIR 10
VR++TV +R
Sbjct: 676 VRQYTVNVR 684


>sp|YR18_THEPE|UNCHARACTERIZED 18.7 kDa protein in|Thermofilum pendens

Query: 2 VREFTVRIR 10
+ EFT RIR
Sbjct: 129 LEEFTARIR 137


>sp|SYH_PYRFU|HISTIDINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VREFTVRI 9
+REFTV I
Sbjct: 151 LREFTVNI 158




241|SequenceR|1210|1201|QICMQEVREF

>sp|Y476_PYRFU|PROTEIN PF0476|Pyrococcus furiosus (strain ATCC 43587

Query: 3 CMQEVREF 10
C++E++EF
Sbjct: 96 CLEEIKEF 103


>sp|PURQ_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Pyrococcus abyssi (strain GE5 /

Query: 1 QICMQEVREF 10
Q M+EVREF
Sbjct: 65 QRIMEEVREF 74


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 CMQEVREF 10
C++E REF
Sbjct: 34 CLEEDREF 41


>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 3 CMQEVRE 9
C++EVRE
Sbjct: 446 CVEEVRE 452




242|SequenceR|1215|1206|GVEKIQICMQ

>sp|HDLC_ARCPA|HETERODISULFIDE reductase subunit C-like protein|Archaeoglobus profundus (strain

Query: 1 GVEKIQICMQ 10
G E++ CMQ
Sbjct: 37 GAERLMYCMQ 46


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VEKIQICM 9
+EKI +CM
Sbjct: 570 LEKIALCM 577




243|SequenceR|1220|1211|YNVRDGVEKI

>sp|TRPB2_ARCFU|TRYPTOPHAN synthase beta chain 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YNVRDGVEKI 10
YN ++GVE++
Sbjct: 125 YNAKEGVERL 134


>sp|CHEB_METBF|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Methanosarcina

Query: 1 YNVRDGVEKI 10
+N +DG+EKI
Sbjct: 38 FNGKDGLEKI 47


>sp|HUTH_HALSA|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 1 YNVRDGVEK 9
YN R+ VEK
Sbjct: 439 YNFREAVEK 447


>sp|HUTH_HALS3|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 29341

Query: 1 YNVRDGVEK 9
YN R+ VEK
Sbjct: 439 YNFREAVEK 447


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 3 VRDGVEKI 10
VR+GVEKI
Sbjct: 421 VRNGVEKI 428


>sp|SYE_NATPD|GLUTAMATE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 VRDGVEK 9
VRDGVEK
Sbjct: 425 VRDGVEK 431


>sp|TRPB2_METMA|TRYPTOPHAN synthase beta chain 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YNVRDGVEKI 10
YN+++G E++
Sbjct: 132 YNMKEGTERL 141


>sp|TRPB2_METAC|TRYPTOPHAN synthase beta chain 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YNVRDGVEKI 10
YN+++G E++
Sbjct: 132 YNMKEGTERL 141


>sp|TRPF_METKA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanopyrus kandleri (strain AV19 /

Query: 2 NVRDGVEKI 10
NVR+ VEK+
Sbjct: 175 NVREAVEKV 183


>sp|RAD50_METJA|DNA double-strand break repair Rad50|Methanocaldococcus jannaschii

Query: 2 NVRDGVEKI 10
N++DG+E+I
Sbjct: 719 NIKDGLEEI 727


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 VRDGVEKI 10
V+DGVE+I
Sbjct: 725 VQDGVERI 732


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 NVRDGVEKI 10
+++DGVE+I
Sbjct: 732 HIQDGVERI 740


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 VRDGVEKI 10
V+DGVE+I
Sbjct: 717 VQDGVERI 724


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 VRDGVEKI 10
V+DGVE+I
Sbjct: 739 VQDGVERI 746


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 NVRDGVEKI 10
+++DG+E+I
Sbjct: 732 HIQDGIERI 740


>sp|END4_THEAC|PROBABLE endonuclease 4|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YNVRDGVEK 9
Y++RD +EK
Sbjct: 190 YDLRDSLEK 198


>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 VRDGVEKI 10
V+DGVE+I
Sbjct: 741 VQDGVERI 748


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 NVRDGVEKI 10
+V+DGVE++
Sbjct: 735 HVQDGVERL 743


>sp|Y247_METM6|UPF0285 protein MmarC6_0247|Methanococcus maripaludis (strain C6 /

Query: 1 YNVRDGVEKI 10
Y++ DG++KI
Sbjct: 59 YSMGDGIDKI 68


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 VRDGVEKI 10
++DGVE+I
Sbjct: 715 IQDGVERI 722


>sp|SEPS_METBF|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 5 DGVEKI 10
DGVEKI
Sbjct: 125 DGVEKI 130


>sp|Y2077_ARCFU|UNCHARACTERIZED protein AF_2077|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YNVRDGVE 8
YN+ DG E
Sbjct: 246 YNLNDGAE 253


>sp|Y1666_METM7|UPF0285 protein MmarC7_1666|Methanococcus maripaludis (strain C7 /

Query: 1 YNVRDGVEKI 10
Y++ DG++KI
Sbjct: 59 YSMGDGIDKI 68


>sp|Y642_METMP|UPF0285 protein MMP0642|Methanococcus maripaludis (strain DSM 14266

Query: 1 YNVRDGVEKI 10
Y++ DG++KI
Sbjct: 59 YSMGDGIDKI 68


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VRDGVEKI 10
++DGVE+I
Sbjct: 736 IQDGVERI 743


>sp|Y1401_METJA|PROBABLE ATP-dependent helicase MJ1401|Methanocaldococcus jannaschii (strain

Query: 3 VRDGVEKI 10
+R+G+EKI
Sbjct: 702 IREGMEKI 709


>sp|CHEB2_METAC|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 2|Methanosarcina

Query: 2 NVRDGVEKI 10
N +DG+EK+
Sbjct: 36 NGKDGLEKV 44


>sp|MFNC_METJA|(5-FORMYLFURAN-3-YL)METHYL phosphate transaminase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 NVRDGVEKI 10
N+++G+E+I
Sbjct: 356 NIKEGLERI 364


>sp|DNLI_THEON|DNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 YNVRDGVEKI 10
YN+ + +EKI
Sbjct: 326 YNIEEMIEKI 335


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 VRDGVEKI 10
++DGVE++
Sbjct: 736 IQDGVERV 743


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 VRDGVEKI 10
++DGVE+I
Sbjct: 741 IQDGVERI 748


>sp|MFNA_THEGJ|PROBABLE L-aspartate decarboxylase|Thermococcus gammatolerans (strain DSM

Query: 2 NVRDGVEKI 10
NVRD EKI
Sbjct: 147 NVRDVEEKI 155


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NVRDGVEKI 10
++DGVE+I
Sbjct: 738 RIQDGVERI 746


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VRDGVEKI 10
++DGVE+I
Sbjct: 739 IQDGVERI 746


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 VRDGVEKI 10
++DGVE+I
Sbjct: 739 IQDGVERI 746


>sp|SAHH_HALWD|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16790

Query: 1 YNVRDGVE 8
Y RDGV+
Sbjct: 325 YEARDGVQ 332


>sp|SAHH_HALWC|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16854

Query: 1 YNVRDGVE 8
Y RDGV+
Sbjct: 325 YEARDGVQ 332


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 RDGVEKI 10
+DGVEK+
Sbjct: 262 KDGVEKV 268


>sp|GRPE_METST|PROTEIN GrpE|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 NVRDGVEKI 10
N+R+GVE I
Sbjct: 96 NLREGVELI 104


>sp|TRPB2_AERPE|TRYPTOPHAN synthase beta chain 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 YNVRDGVEKI 10
YN +GVE++
Sbjct: 126 YNKLEGVERL 135




244|SequenceR|1225|1216|LSRKIYNVRD

>sp|SDX_THEAC|PROBABLE sulredoxin|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LSRKIYNVRD 10
L K+YNVRD
Sbjct: 92 LGLKVYNVRD 101


>sp|RBL_PYRHO|RIBULOSE bisphosphate carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RKIYNVRD 10
RK+Y VRD
Sbjct: 204 RKLYRVRD 211


>sp|RBL_PYRAB|RIBULOSE bisphosphate carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 3 RKIYNVRD 10
+K+Y VRD
Sbjct: 203 KKLYRVRD 210


>sp|TRUA_PYRIL|TRNA pseudouridine synthase A|Pyrobaculum islandicum (strain DSM 4184

Query: 3 RKIYNVRD 10
R I+N+RD
Sbjct: 176 RGIFNIRD 183


>sp|RBL_PYRFU|RIBULOSE bisphosphate carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RKIYNVRD 10
+K+Y +RD
Sbjct: 199 KKLYRIRD 206


>sp|RL32_METMA|LARGE ribosomal subunit protein eL32|Methanosarcina mazei (strain ATCC

Query: 2 SRKIYNVR 9
SR+++NVR
Sbjct: 5 SRRLFNVR 12


>sp|CISY_HALVD|CITRATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 4 KIYNVRD 10
++YNV+D
Sbjct: 266 RVYNVKD 272


>sp|RL32_METAC|LARGE ribosomal subunit protein eL32|Methanosarcina acetivorans (strain

Query: 2 SRKIYNVR 9
SR+++NVR
Sbjct: 5 SRRLFNVR 12


>sp|GLYA_METS3|SERINE hydroxymethyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 LSRKIYNV 8
LS+K++NV
Sbjct: 77 LSKKLFNV 84


>sp|CAS4_AERPE|CRISPR-ASSOCIATED exonuclease Cas4|Aeropyrum pernix (strain ATCC 700893

Query: 1 LSRKIYNV 8
LSR+IY+V
Sbjct: 35 LSREIYSV 42


>sp|BIOB_METJA|BIOTIN synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KIYNVRD 10
+IYN+RD
Sbjct: 314 RIYNLRD 320


>sp|TTDB_METJA|PUTATIVE L(+)-tartrate dehydratase subunit beta|Methanocaldococcus

Query: 1 LSRKIYNVRD 10
L+ KIY RD
Sbjct: 24 LNGKIYTARD 33




245|SequenceR|1230|1221|SDLSQLSRKI

***** No hits found ******


246|SequenceR|1235|1226|LHGIQSDLSQ

***** No hits found ******


247|SequenceR|1240|1231|ASLDQLHGIQ

>sp|ARLY_METPE|ARGININOSUCCINATE lyase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 ASLDQLHGIQ 10
A+LD +HGI+
Sbjct: 428 AALDPVHGIE 437


>sp|Y1170_METST|PUTATIVE nickel insertion protein|Methanosphaera stadtmanae (strain ATCC

Query: 2 SLDQLH 7
SLDQLH
Sbjct: 120 SLDQLH 125


>sp|HEM1_SULTO|GLUTAMYL-TRNA reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 LDQLHGIQ 10
LD++HG Q
Sbjct: 75 LDEIHGKQ 82


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter thermautotrophicus

Query: 2 SLDQLHGI 9
SLD+ HG+
Sbjct: 1053 SLDEYHGM 1060


>sp|FBPAP_CENSY|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Cenarchaeum symbiosum (strain A)

Query: 1 ASLDQLHGI 9
AS D+LH I
Sbjct: 212 ASTDRLHNI 220


>sp|CHEA_HALS3|CHEMOTAXIS protein CheA|Halobacterium salinarum (strain ATCC 29341

Query: 3 LDQLHGI 9
LD+LHG+
Sbjct: 304 LDELHGL 310




248|SequenceR|1245|1236|TDVTLASLDQ

>sp|MCRA_METFE|METHYL-COENZYME M reductase subunit alpha|Methanothermus fervidus

Query: 1 TDVTLASLDQ 10
T+VTL SLDQ
Sbjct: 379 TEVTLYSLDQ 388


>sp|MCRX_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 TDVTLASLDQ 10
T+VTL SL+Q
Sbjct: 377 TEVTLYSLEQ 386


>sp|MCRX_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 TDVTLASLDQ 10
T+VTL SL+Q
Sbjct: 377 TEVTLYSLEQ 386


>sp|HYPA_METMP|HYDROGENASE maturation factor HypA|Methanococcus maripaludis (strain DSM

Query: 2 DVTLASLDQ 10
D+TL SLDQ
Sbjct: 40 DLTLISLDQ 48




249|SequenceR|1250|1241|TLTKLTDVTL

***** No hits found ******


250|SequenceR|1255|1246|SAKQATLTKL

>sp|ASPG_THEKO|L-ASPARAGINASE kodakarensis (strain ATCC BAA-918

Query: 3 KQATLTKL 10
K+ATLTKL
Sbjct: 293 KEATLTKL 300


>sp|ASPG_PYRFU|L-ASPARAGINASE furiosus (strain ATCC 43587

Query: 3 KQATLTKL 10
K+AT+TKL
Sbjct: 292 KEATVTKL 299




251|SequenceR|1260|1251|VKSAESAKQA

***** No hits found ******


252|SequenceR|1265|1256|TIENHVKSAE

>sp|GSA_PICTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Picrophilus torridus (strain ATCC 700027

Query: 2 IENHVKSAE 10
I+NHVKS E
Sbjct: 95 IKNHVKSIE 103


>sp|Y3270_HALS3|UNCHARACTERIZED solute-binding protein OE_3270R|Halobacterium salinarum (strain

Query: 1 TIENHVKSA 9
TIE+H++ A
Sbjct: 45 TIEDHIRPA 53


>sp|Y1595_HALSA|UNCHARACTERIZED solute-binding protein VNG_1595C|Halobacterium salinarum (strain

Query: 1 TIENHVKSA 9
TIE+H++ A
Sbjct: 45 TIEDHIRPA 53


>sp|Y105_METJA|UNCHARACTERIZED protein MJ0105|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IENHVKS 8
IENH+K+
Sbjct: 56 IENHIKT 62


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 IENHVKSAE 10
+ENH+K E
Sbjct: 274 LENHIKEYE 282


>sp|GATE_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfolobus acidocaldarius (strain ATCC

Query: 1 TIENHVKSAE 10
T+EN++K A+
Sbjct: 508 TLENYIKYAK 517


>sp|Y092_METJA|UNCHARACTERIZED iron-sulfur protein MJ0092|Methanocaldococcus jannaschii (strain

Query: 2 IENHVKSAE 10
IENH+K E
Sbjct: 221 IENHLKVRE 229




253|SequenceR|1270|1261|ISLERTIENH

>sp|GGR_THEVO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 LERTIENH 10
L+R IENH
Sbjct: 241 LDRFIENH 248


>sp|GGR_THEAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 LERTIENH 10
L+R IENH
Sbjct: 241 LDRFIENH 248


>sp|RL18E_HALMA|LARGE ribosomal subunit protein eL18|Haloarcula marismortui (strain ATCC

Query: 1 ISLERTIENH 10
+SLE+ IEN+
Sbjct: 97 VSLEQAIENN 106


>sp|Y22A_METJA|UNCHARACTERIZED protein MJ0226.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SLERTIENH 10
++E+TI NH
Sbjct: 180 NVEKTIRNH 188


>sp|BPSA_THEKO|N(4)-BIS(AMINOPROPYL)SPERMIDINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 ERTIEN 9
ERTIEN
Sbjct: 18 ERTIEN 23


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 SLERTIE 8
SLERT+E
Sbjct: 1078 SLERTVE 1084




254|SequenceR|1275|1266|ALHKSISLER

>sp|RL22_SACS2|LARGE ribosomal subunit protein uL22|Saccharolobus solfataricus (strain

Query: 1 ALHKSISLER 10
A HK I+L+R
Sbjct: 121 AAHKGITLQR 130




255|SequenceR|1280|1271|DILNQALHKS

>sp|PYRE_SACS2|OROTATE phosphoribosyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 DILNQALHKS 10
DI+NQA+ K+
Sbjct: 43 DIVNQAIKKA 52


>sp|HDRB2_METJA|COB--COM heterodisulfide reductase subunit B|Methanocaldococcus jannaschii

Query: 1 DILNQALH 8
D+LN A+H
Sbjct: 144 DVLNVAIH 151


>sp|RUXX_METAR|PUTATIVE snRNP Sm-like protein|Methanocella arvoryzae (strain DSM 22066

Query: 1 DILNQALH 8
D+LN+AL+
Sbjct: 7 DVLNEALN 14




256|SequenceR|1285|1276|RVPGDDILNQ

>sp|HTPX2_METMA|PROTEASE HtpX homolog 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RVPGDDI 7
RVPGDD+
Sbjct: 243 RVPGDDL 249


>sp|AATB_PICTO|A-TYPE ATP synthase subunit B|Picrophilus torridus (strain ATCC 700027

Query: 2 VPGDDILN 9
+PGDDI N
Sbjct: 307 MPGDDITN 314


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 4 GDDILNQ 10
G+DILNQ
Sbjct: 1790 GEDILNQ 1796


>sp|TATCO_HALVD|SEC-INDEPENDENT protein translocase protein TatCo|Haloferax volcanii (strain ATCC

Query: 3 PGDDILN 9
PG DILN
Sbjct: 216 PGADILN 222


>sp|AATA_IGNH4|A-TYPE ATP synthase subunit A|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 RVPGDDIL 8
+V GDDIL
Sbjct: 132 KVSGDDIL 139


>sp|FDHD_SACS2|SULFUR carrier protein FdhD|Saccharolobus solfataricus (strain ATCC

Query: 1 RVPGDD 6
R PGDD
Sbjct: 48 RTPGDD 53


>sp|Y1653_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 2 VPGDDILNQ 10
+P D+ILN+
Sbjct: 22 IPRDNILNK 30


>sp|AATB_ARCFU|A-TYPE ATP synthase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VPGDDI 7
+PGDDI
Sbjct: 304 MPGDDI 309


>sp|AATB_METTP|A-TYPE ATP synthase subunit B|Methanothrix thermoacetophila (strain DSM

Query: 2 VPGDDI 7
+PGDDI
Sbjct: 305 MPGDDI 310


>sp|AATB_THEVO|A-TYPE ATP synthase subunit B|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VPGDDI 7
+PGDDI
Sbjct: 307 MPGDDI 312


>sp|AATB_METAR|A-TYPE ATP synthase subunit B|Methanocella arvoryzae (strain DSM 22066

Query: 2 VPGDDI 7
+PGDDI
Sbjct: 304 MPGDDI 309


>sp|AATB_METLZ|A-TYPE ATP synthase subunit B|Methanocorpusculum labreanum (strain ATCC

Query: 2 VPGDDI 7
+PGDDI
Sbjct: 304 MPGDDI 309


>sp|AATB_THEAC|A-TYPE ATP synthase subunit B|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VPGDDI 7
+PGDDI
Sbjct: 307 MPGDDI 312


>sp|AATB_METBA|A-TYPE ATP synthase subunit B|Methanosarcina barkeri

Query: 2 VPGDDI 7
+PGDDI
Sbjct: 305 MPGDDI 310


>sp|AATB_METMJ|A-TYPE ATP synthase subunit B|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 VPGDDI 7
+PGDDI
Sbjct: 304 MPGDDI 309


>sp|AATB_METMA|A-TYPE ATP synthase subunit B|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VPGDDI 7
+PGDDI
Sbjct: 305 MPGDDI 310


>sp|RPO2C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 2 VPGDDI 7
+PGDD+
Sbjct: 262 IPGDDV 267


>sp|RPO2C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 2 VPGDDI 7
+PGDD+
Sbjct: 262 IPGDDV 267


>sp|AATB_METPE|A-TYPE ATP synthase subunit B|Methanosphaerula palustris (strain ATCC

Query: 2 VPGDDI 7
+PGDDI
Sbjct: 304 MPGDDI 309


>sp|AATB_METBF|A-TYPE ATP synthase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 2 VPGDDI 7
+PGDDI
Sbjct: 305 MPGDDI 310




257|SequenceR|1290|1281|KWVSPRVPGD

>sp|DEGLY_PYRAB|DEGLYCASE PYRAB04690|Pyrococcus abyssi (strain GE5 /

Query: 1 KWVSPRVPGD 10
WVS RVPGD
Sbjct: 144 NWVSSRVPGD 153


>sp|DEGLY_PYRHO|DEGLYCASE PH1704|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 WVSPRVPGD 10
WVS RVP D
Sbjct: 145 WVSSRVPAD 153


>sp|DEGLY_PYRFU|DEGLYCASE PfpI|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WVSPRVPGD 10
WVS R PGD
Sbjct: 145 WVSSRHPGD 153


>sp|DEGLY_THEKO|DEGLYCASE TK1284|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 WVSPRVPGD 10
WVS R PGD
Sbjct: 145 WVSSRHPGD 153


>sp|FLAK_METMP|PREFLAGELLIN peptidase|Methanococcus maripaludis (strain DSM 14266

Query: 2 WVSPRVP 8
WV+P++P
Sbjct: 198 WVTPQIP 204


>sp|FLAK_METM6|PREFLAGELLIN peptidase|Methanococcus maripaludis (strain C6 /

Query: 2 WVSPRVP 8
WV+P++P
Sbjct: 198 WVTPQIP 204


>sp|MTM2_METJA|TYPE II methyltransferase M.MjaII|Methanocaldococcus jannaschii (strain

Query: 1 KWVSPRV 7
KW SPR+
Sbjct: 274 KWYSPRI 280


>sp|CHEB1_METAC|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina

Query: 3 VSPRVPGD 10
V PR+PGD
Sbjct: 173 VIPRLPGD 180


>sp|CHEB1_METMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina mazei

Query: 3 VSPRVPGD 10
V PR+PGD
Sbjct: 181 VIPRLPGD 188


>sp|CHEB_METBU|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Methanococcoides

Query: 3 VSPRVPGD 10
+ PR+PGD
Sbjct: 175 IIPRLPGD 182


>sp|Y1509_METJA|UNCHARACTERIZED protein MJ1509|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KWVSPRVPGD 10
K+V ++PGD
Sbjct: 92 KYVMKKIPGD 101


>sp|Y1304_METJA|PUTATIVE toxin MJ1304|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WVSPRVP 8
WV PR P
Sbjct: 100 WVMPRYP 106


>sp|NASD_HALMT|ASSIMILATORY ferredoxin-dependent nitrite reductase|Haloferax mediterranei

Query: 1 KWVSPRVPGD 10
+W+ RVP D
Sbjct: 500 EWIHQRVPAD 509


>sp|DPOL_THES9|DNA polymerase|Thermococcus sp. (strain 9oN-7)

Query: 1 KWVSPRVPG 9
K+++P++PG
Sbjct: 565 KYINPKLPG 573


>sp|RS4E_METBF|SMALL ribosomal subunit protein eS4|Methanosarcina barkeri (strain

Query: 1 KWVSPRVPG 9
KWVS PG
Sbjct: 21 KWVSTTRPG 29


>sp|Y973_PYRAB|UPF0201 protein PYRAB09730|Pyrococcus abyssi (strain GE5 /

Query: 1 KWVSPR 6
KW++PR
Sbjct: 125 KWLAPR 130


>sp|RFCL_HALWD|REPLICATION factor C large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 KWVSPRVP 8
KWV +VP
Sbjct: 264 KWVEDKVP 271


>sp|Y1297_PYRFU|UPF0201 protein PF1297|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KWVSPR 6
KW++PR
Sbjct: 127 KWLAPR 132


>sp|DPOL_DESST|DNA polymerase|Desulfurococcus sp. (strain Tok)

Query: 2 WVSPRVPG 9
+++PR+PG
Sbjct: 566 YINPRLPG 573


>sp|Y1335_THEKO|UPF0201 protein TK1335|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KWVSPR 6
KW++PR
Sbjct: 125 KWLAPR 130


>sp|Y1010_PYRHO|UPF0201 protein PH1010|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KWVSPR 6
KW++PR
Sbjct: 125 KWLAPR 130


>sp|Y1346_THEON|UPF0201 protein TON_1346|Thermococcus onnurineus (strain NA1)

Query: 1 KWVSPR 6
KW++PR
Sbjct: 122 KWLAPR 127


>sp|ILVC_METTP|KETOL-ACID reductoisomerase (NADP(+))|Methanothrix thermoacetophila (strain

Query: 3 VSPRVPGD 10
V+P+ PGD
Sbjct: 128 VAPKGPGD 135


>sp|RSMA_METHJ|PROBABLE ribosomal RNA small subunit|Methanospirillum hungatei JF-1 (strain

Query: 2 WVSPRVP 8
W+ PR P
Sbjct: 176 WIEPREP 182


>sp|TRPG_HALSA|ANTHRANILATE synthase component 2|Halobacterium salinarum (strain ATCC 700922

Query: 3 VSPRVP 8
VSPRVP
Sbjct: 77 VSPRVP 82


>sp|RS4E_METAC|SMALL ribosomal subunit protein eS4|Methanosarcina acetivorans (strain

Query: 1 KWVSPRVPG 9
KW+S PG
Sbjct: 21 KWISTTRPG 29


>sp|CYAS_METPS|CYSTEATE synthase|Methanocella paludicola (strain DSM 17711

Query: 2 WVSPRVPGD 10
W+ R PGD
Sbjct: 159 WIPGREPGD 167


>sp|ILVD_PYRIL|DIHYDROXY-ACID dehydratase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 KWVSPRVPGD 10
+W P VP D
Sbjct: 356 RWQPPSVPED 365


>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 KWVSPRVPGD 10
+W P VP D
Sbjct: 356 RWQPPAVPED 365


>sp|FEN_METBF|FLAP endonuclease 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 KWVSPRVPGD 10
KW + +V GD
Sbjct: 104 KWENAKVEGD 113


>sp|ANTRB_HALVD|PUTATIVE ABC transporter anion-binding protein|Haloferax volcanii (strain

Query: 2 WVSPRVPGD 10
WV+ VP D
Sbjct: 333 WVAQHVPED 341


>sp|RS4_STAMF|SMALL ribosomal subunit protein uS4|Staphylothermus marinus (strain

Query: 1 KWVSPRVP 8
KW PR P
Sbjct: 10 KWEGPRHP 17


>sp|RFCL_HALSA|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 700922

Query: 2 WVSPRVPGD 10
WV+ VP D
Sbjct: 261 WVADNVPKD 269


>sp|RFCL_HALS3|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 29341

Query: 2 WVSPRVPGD 10
WV+ VP D
Sbjct: 261 WVADNVPKD 269


>sp|GLPK1_SULAC|GLYCEROL kinase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KWVSPRVPG 9
KW+ VPG
Sbjct: 140 KWILDNVPG 148


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 4 SPRVPGD 10
SP+ PGD
Sbjct: 432 SPKYPGD 438




258|SequenceR|1295|1286|VVGHKKWVSP

>sp|SYG_ARCFU|GLYCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 KKWVSP 10
K+WVSP
Sbjct: 455 KRWVSP 460


>sp|Y1185_METJA|UNCHARACTERIZED protein MJ1185|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 HKKWVSP 10
H+KW+ P
Sbjct: 524 HRKWLKP 530


>sp|HEMH_THEVO|FERROCHELATASE volcanium (strain ATCC 51530

Query: 3 GHKKWVSP 10
GH+ W+ P
Sbjct: 207 GHEGWLGP 214


>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 6 KWVSP 10
KWVSP
Sbjct: 313 KWVSP 317


>sp|FBPAP_METJA|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VVGHKK 6
VVGHKK
Sbjct: 177 VVGHKK 182


>sp|SYFB_METTP|PHENYLALANINE--TRNA ligase beta subunit|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 KKWVSP 10
K+W+SP
Sbjct: 264 KEWISP 269


>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 6 KWVSP 10
KWVSP
Sbjct: 314 KWVSP 318


>sp|GLMS_METMP|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanococcus maripaludis (strain

Query: 2 VGHKKWVS 9
+GH +W +
Sbjct: 68 IGHSRWAT 75


>sp|FAU1_STAMF|PROBABLE ribonuclease FAU-1|Staphylothermus marinus (strain ATCC 43588

Query: 6 KWVSP 10
KWVSP
Sbjct: 83 KWVSP 87


>sp|GLMS_THEKO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Thermococcus kodakarensis (strain

Query: 2 VGHKKWVS 9
+GH +W +
Sbjct: 69 IGHTRWAT 76


>sp|GLMS_PYRHO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus horikoshii (strain ATCC

Query: 2 VGHKKWVS 9
+GH +W +
Sbjct: 69 IGHTRWAT 76


>sp|GLMS_PYRAB|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus abyssi (strain GE5 /

Query: 2 VGHKKWVS 9
+GH +W +
Sbjct: 69 IGHTRWAT 76


>sp|GLMS_METMA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina mazei (strain ATCC

Query: 2 VGHKKWVS 9
+GH +W +
Sbjct: 67 IGHTRWAT 74


>sp|GLMS_METKA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanopyrus kandleri (strain AV19

Query: 2 VGHKKWVS 9
+GH +W +
Sbjct: 73 IGHTRWAT 80


>sp|GLMS_METAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina acetivorans (strain

Query: 2 VGHKKWVS 9
+GH +W +
Sbjct: 67 IGHTRWAT 74


>sp|GLMS_PYRFU|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus furiosus (strain ATCC

Query: 2 VGHKKWVS 9
+GH +W +
Sbjct: 69 IGHTRWAT 76


>sp|RL3_SACS2|LARGE ribosomal subunit protein uL3|Saccharolobus solfataricus (strain

Query: 2 VGHKKWVSP 10
+GH+K SP
Sbjct: 1 MGHRKLASP 9


>sp|RL3_SACI7|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 2 VGHKKWVSP 10
+GH+K SP
Sbjct: 1 MGHRKLASP 9


>sp|RL3_SACI3|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 2 VGHKKWVSP 10
+GH+K SP
Sbjct: 1 MGHRKLASP 9


>sp|RL3_SACI2|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 2 VGHKKWVSP 10
+GH+K SP
Sbjct: 1 MGHRKLASP 9


>sp|RL3_SACI1|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 2 VGHKKWVSP 10
+GH+K SP
Sbjct: 1 MGHRKLASP 9


>sp|RL3_SACI6|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 2 VGHKKWVSP 10
+GH+K SP
Sbjct: 1 MGHRKLASP 9


>sp|RL3_SACI4|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 2 VGHKKWVSP 10
+GH+K SP
Sbjct: 1 MGHRKLASP 9


>sp|RL3_SULTO|LARGE ribosomal subunit protein uL3|Sulfurisphaera tokodaii (strain DSM

Query: 2 VGHKKWVSP 10
+GH+K SP
Sbjct: 1 MGHRKLASP 9


>sp|RFHPS_METJA|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VGHKKW 7
VGHK W
Sbjct: 323 VGHKIW 328


>sp|GLMS_AERPE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Aeropyrum pernix (strain ATCC

Query: 2 VGHKKWVS 9
+GH +W +
Sbjct: 72 IGHTRWAT 79


>sp|SPSS2_ARCFU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GHKKWVS 9
GHK W +
Sbjct: 211 GHKSWAA 217


>sp|DCD_PYRFU|DCTP deaminase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VVGHKKWVSP 10
V+G WV P
Sbjct: 87 VIGSFAWVDP 96


>sp|FTRL_ARCFU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Archaeoglobus fulgidus (strain

Query: 3 GHKKWVSP 10
G +KW+SP
Sbjct: 55 GVEKWLSP 62


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 3 GHKKW 7
GH KW
Sbjct: 1234 GHSKW 1238


>sp|RS25_AERPE|SMALL ribosomal subunit protein eS25|Aeropyrum pernix (strain ATCC

Query: 2 VGHKKWVSP 10
V ++WV+P
Sbjct: 42 VARERWVTP 50


>sp|SYT_METHJ|THREONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 VGHKKWV 8
VGH +W+
Sbjct: 213 VGHLRWL 219




259|SequenceR|1300|1291|SSLTNVVGHK

>sp|RFCL_METBU|REPLICATION factor C large subunit|Methanococcoides burtonii (strain DSM 6242

Query: 2 SLTNVVGHK 10
SLT++VG+K
Sbjct: 15 SLTDIVGNK 23


>sp|GLMS_METKA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanopyrus kandleri (strain AV19 /

Query: 2 SLTNVVG 8
+LTNVVG
Sbjct: 375 ALTNVVG 381


>sp|RS6E_SULTO|SMALL ribosomal subunit protein eS6|Sulfurisphaera tokodaii (strain DSM

Query: 1 SSLTNVVGHK 10
S L+N++G K
Sbjct: 124 SKLSNIIGAK 133


>sp|CDPAS_METKA|CDP-ARCHAEOL synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 LTNVVGH 9
LTNV+G+
Sbjct: 158 LTNVIGY 164


>sp|CETZ_METTP|TUBULIN-LIKE protein CetZ|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 SLTNVVGH 9
SLT +GH
Sbjct: 295 SLTETIGH 302




260|SequenceR|1305|1296|GQPLSSSLTN

>sp|SYK_HALMA|LYSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GQPLSSSLTN 10
G+PLSSS N
Sbjct: 305 GEPLSSSSGN 314


>sp|LYSJ_PYRFU|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 GQPLSSSLTN 10
G P+S +LTN
Sbjct: 235 GVPVSLTLTN 244


>sp|LYSJ_PYRAB|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 GQPLSSSLTN 10
G P+S +LTN
Sbjct: 235 GVPVSLTLTN 244


>sp|FOLD_METB6|BIFUNCTIONAL protein FolD|Methanoregula boonei (strain DSM 21154

Query: 1 GQPLSSSLTN 10
G+P+++ LTN
Sbjct: 167 GRPMAALLTN 176




261|SequenceR|1310|1301|NSELDGQPLS

>sp|RNFC_METAC|ION-TRANSLOCATING oxidoreductase complex subunit C|Methanosarcina acetivorans (strain

Query: 1 NSELDGQPLS 10
N+++DG+PL+
Sbjct: 197 NAKVDGKPLT 206


>sp|SYDND_META3|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 NSELDGQPL 9
NSE+DGQ +
Sbjct: 17 NSEMDGQEI 25


>sp|SYK_HALMA|LYSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 LDGQPLS 10
LDG+PLS
Sbjct: 303 LDGEPLS 309


>sp|Y1574_ARCFU|UNCHARACTERIZED protein AF_1574|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NSELDGQPL 9
NS L+G+PL
Sbjct: 33 NSWLEGKPL 41


>sp|Y1002_PYRHO|UPF0282 protein PH1002|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SELDGQPLS 10
SELD +PL+
Sbjct: 257 SELDERPLT 265


>sp|NASA_HALMT|ASSIMILATORY nitrate reductase|Haloferax mediterranei (strain ATCC 33500

Query: 2 SELDGQPL 9
S LDG+PL
Sbjct: 566 STLDGEPL 573


>sp|SYFB_HALSA|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 700922

Query: 3 ELDGQP 8
E+DGQP
Sbjct: 530 EIDGQP 535


>sp|SYFB_HALS3|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 29341

Query: 3 ELDGQP 8
E+DGQP
Sbjct: 530 EIDGQP 535


>sp|GNTDO_HALSB|GENTISATE 1,2-dioxygenase|Haloferax sp

Query: 1 NSELDGQPLS 10
N ELD QP++
Sbjct: 183 NHELDRQPVT 192




262|SequenceR|1315|1306|CHFPNNSELD

>sp|Y1466_METJA|UNCHARACTERIZED protein MJ1466|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FPNNSELD 10
FPNNS+ D
Sbjct: 187 FPNNSKFD 194


>sp|Y017_METJA|UNCHARACTERIZED protein MJ0017|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FPNNSELD 10
FPNNS+ D
Sbjct: 187 FPNNSKFD 194


>sp|FPRA_METTH|COENZYME F420H(2) oxidase|Methanothermobacter thermautotrophicus (strain

Query: 2 HFPNNSELD 10
+ PNN ELD
Sbjct: 381 YVPNNEELD 389


>sp|MRE11_HALVD|DNA double-strand break repair protein|Haloferax volcanii (strain ATCC

Query: 2 HFPNNSELD 10
H P+ +ELD
Sbjct: 183 HVPDTAELD 191


>sp|Y13A_METJA|UNCHARACTERIZED protein MJ0139.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FPNNSELD 10
FP+NS+ D
Sbjct: 73 FPSNSKFD 80


>sp|CCA_METKA|CCA-ADDING enzyme|Methanopyrus kandleri (strain AV19 /

Query: 1 CHFPNNSELD 10
C FP + +LD
Sbjct: 70 CVFPKDRDLD 79


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 4 PNNSELD 10
PN SELD
Sbjct: 279 PNTSELD 285


>sp|BAX1_SULTO|ENDONUCLEASE Bax1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 HFPNNSELD 10
HF N +LD
Sbjct: 19 HFATNEDLD 27


>sp|GLYA_ARCFU|SERINE hydroxymethyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HFPNNSE 8
H+P NSE
Sbjct: 152 HYPFNSE 158


>sp|ADEC_CENSY|ADENINE deaminase|Cenarchaeum symbiosum (strain A)

Query: 1 CHFPNNSE 8
CH P N+E
Sbjct: 228 CHEPVNAE 235


>sp|Y995_METJA|UNCHARACTERIZED protein MJ0995|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PNNSELD 10
PNN E+D
Sbjct: 176 PNNQEID 182


>sp|COMB_METJA|2-PHOSPHOSULFOLACTATE phosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CHFPNNSELD 10
CH NN +D
Sbjct: 136 CHRENNFAID 145




263|SequenceR|1320|1311|KMLINCHFPN

>sp|RFRNP_METTH|RNA-FREE ribonuclease P|Methanothermobacter thermautotrophicus (strain

Query: 1 KMLINCHFP 9
K+ I+CH P
Sbjct: 45 KLNISCHMP 53


>sp|RFRNP_METJA|RNA-FREE ribonuclease P|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KMLINCHFP 9
K+ I+CH P
Sbjct: 48 KLNISCHIP 56


>sp|RFRNP_METVS|RNA-FREE ribonuclease P|Methanococcus vannielii (strain ATCC 35089

Query: 1 KMLINCHFP 9
K+ I+CH P
Sbjct: 44 KLDISCHIP 52


>sp|RL6_METMP|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 1 KMLINCHFP 9
K++I C FP
Sbjct: 52 KVVIECAFP 60


>sp|RL6_METM7|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 1 KMLINCHFP 9
K++I C FP
Sbjct: 52 KVVIECTFP 60


>sp|RL6_METM6|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 1 KMLINCHFP 9
K++I C FP
Sbjct: 52 KVVIECTFP 60


>sp|RL6_METM5|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 1 KMLINCHFP 9
K++I C FP
Sbjct: 52 KVVIECTFP 60


>sp|ARFB_METM5|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus maripaludis (strain C5 /

Query: 2 MLINCHFPN 10
++INCH N
Sbjct: 103 LIINCHGGN 111


>sp|ARFB_METMP|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus maripaludis (strain DSM

Query: 2 MLINCHFPN 10
++INCH N
Sbjct: 103 LIINCHGGN 111


>sp|ARFB_METV3|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus voltae (strain ATCC

Query: 2 MLINCHFPN 10
++INCH N
Sbjct: 107 LIINCHGGN 115


>sp|ARFB_METM7|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus maripaludis (strain C7 /

Query: 2 MLINCHFPN 10
++INCH N
Sbjct: 103 LIINCHGGN 111


>sp|GLMS_METJA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanocaldococcus jannaschii

Query: 2 MLINCHFPN 10
++IN +FPN
Sbjct: 665 VIINKNFPN 673


>sp|Y2239_ARCFU|UNCHARACTERIZED protein AF_2239|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KMLINCHF 8
K+L++C+F
Sbjct: 91 KLLLDCNF 98


>sp|ARFB_META3|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus aeolicus (strain ATCC

Query: 2 MLINCHFPN 10
++INCH N
Sbjct: 120 LIINCHGGN 128


>sp|ARFB_METVS|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus vannielii (strain ATCC

Query: 2 MLINCHFPN 10
++INCH N
Sbjct: 105 LIINCHGGN 113


>sp|ARFB_METSF|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanocaldococcus sp. (strain

Query: 2 MLINCHFPN 10
+++NCH N
Sbjct: 102 LIVNCHGGN 110


>sp|ARFB_METM6|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus maripaludis (strain C6 /

Query: 2 MLINCHFPN 10
+++NCH N
Sbjct: 103 LIVNCHGGN 111


>sp|ARFB_METJA|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanocaldococcus jannaschii (strain

Query: 2 MLINCHFPN 10
+++NCH N
Sbjct: 102 LIVNCHGGN 110


>sp|ARFB_METFA|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanocaldococcus fervens (strain DSM

Query: 2 MLINCHFPN 10
+++NCH N
Sbjct: 102 LIVNCHGGN 110


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 3 LINCHFPN 10
++N +FPN
Sbjct: 166 MVNSYFPN 173


>sp|ARFB_METVM|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanocaldococcus vulcanius (strain

Query: 2 MLINCHFPN 10
+++NCH N
Sbjct: 103 IIVNCHGGN 111


>sp|ARFB_METIM|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanocaldococcus infernus (strain

Query: 2 MLINCHFPN 10
+++NCH N
Sbjct: 103 IIVNCHGGN 111




264|SequenceR|1325|1316|PDKDDKMLIN

>sp|TRPB_METJA|TRYPTOPHAN synthase beta chain|Methanocaldococcus jannaschii (strain ATCC

Query: 2 DKDDKMLIN 10
DKDD M+IN
Sbjct: 376 DKDDIMVIN 384


>sp|TRPB_METVO|TRYPTOPHAN synthase beta chain|Methanococcus voltae

Query: 2 DKDDKMLIN 10
DKDD M+IN
Sbjct: 380 DKDDIMVIN 388


>sp|GLCD1_HALTV|GLUCOSE 1-dehydrogenase 1|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 PDKDDKMLI 9
PD DD++++
Sbjct: 53 PDGDDRLVL 61


>sp|Y357_METJA|UNCHARACTERIZED protein MJ0357|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PDKDDKMLIN 10
P+KD+K+ +N
Sbjct: 27 PEKDEKIRLN 36


>sp|CSA3_SACS2|CRISPR locus-related putative DNA-binding protein|Saccharolobus

Query: 2 DKDDKMLIN 10
DK +K LIN
Sbjct: 170 DKSEKTLIN 178




265|SequenceR|1330|1321|FINCQPDKDD

>sp|SYS_METLZ|SERINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 FINCQPDK 8
FI C P+K
Sbjct: 288 FIYCMPEK 295




266|SequenceR|1335|1326|PLDQGFINCQ

>sp|CDC6Q_HALMA|ORC1-TYPE DNA replication protein 17|Haloarcula marismortui (strain ATCC

Query: 2 LDQGFINCQ 10
L G++NCQ
Sbjct: 100 LATGYVNCQ 108


>sp|CDC6_PYRHO|ORC1-TYPE DNA replication protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PLDQGFINCQ 10
P+D +INC+
Sbjct: 95 PVDVIYINCE 104


>sp|CDC6_PYRFU|ORC1-TYPE DNA replication protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PLDQGFINCQ 10
P+D +INC+
Sbjct: 96 PVDVIYINCE 105


>sp|UPPS_SULAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (GGDP specific)|Sulfolobus acidocaldarius (strain ATCC

Query: 1 PLDQGF 6
PLDQG+
Sbjct: 52 PLDQGY 57


>sp|IPYR_METKA|INORGANIC pyrophosphatase|Methanopyrus kandleri (strain AV19 /

Query: 1 PLDQGFI 7
PLD GFI
Sbjct: 54 PLDYGFI 60


>sp|KTHY2_SACS2|PROBABLE thymidylate kinase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PLDQGFINCQ 10
PL++GF+ Q
Sbjct: 159 PLEEGFLKYQ 168


>sp|RIBL_METFV|FAD synthase|Methanothermus fervidus (strain ATCC 43054

Query: 1 PLDQGFINCQ 10
P+D+ ++ C+
Sbjct: 63 PVDEAYLGCE 72


>sp|CDC6_THEON|ORC1-TYPE DNA replication protein|Thermococcus onnurineus (strain NA1)

Query: 1 PLDQGFINCQ 10
P+D ++NC+
Sbjct: 92 PVDVIYVNCE 101


>sp|UREG_CENSY|UREASE accessory protein UreG|Cenarchaeum symbiosum (strain A)

Query: 5 GFINC 9
GF+NC
Sbjct: 183 GFVNC 187




267|SequenceR|1340|1331|RQPVAPLDQG

>sp|Y524_METJA|UNCHARACTERIZED protein MJ0524|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RQPVAPLDQG 10
+ P+AP D+G
Sbjct: 61 KTPLAPYDRG 70


>sp|PHS_HALLT|PUTATIVE pterin-4-alpha-carbinolamine dehydratase|Halorubrum lacusprofundi

Query: 2 QPVAPLDQG 10
+PV P D+G
Sbjct: 8 EPVEPADEG 16


>sp|HANA_THEZI|ARCHAEAL histone HAN1 subunit A|Thermococcus zilligii

Query: 3 PVAPLDQ 9
P+AP+D+
Sbjct: 5 PIAPIDR 11




268|SequenceR|1345|1336|FNFEKRQPVA

>sp|RL5_METS3|LARGE ribosomal subunit protein uL5|Methanobrevibacter smithii (strain

Query: 1 FNFEKRQPVA 10
F KRQP+A
Sbjct: 52 FGIRKRQPIA 61


>sp|Y169_METJA|UNCHARACTERIZED ATP-binding protein MJ0169|Methanocaldococcus jannaschii (strain

Query: 1 FNFEKRQP 8
FN EK++P
Sbjct: 51 FNMEKKKP 58


>sp|AMZA_PYRAB|ARCHAEMETZINCIN abyssi (strain GE5 /

Query: 1 FNFEKRQPVA 10
F+FE+RQ +A
Sbjct: 51 FDFERRQFLA 60


>sp|AMYA_METJA|PUTATIVE alpha-amylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FNFEKRQP 8
FNFE QP
Sbjct: 5 FNFEVHQP 12


>sp|RL5_METST|LARGE ribosomal subunit protein uL5|Methanosphaera stadtmanae (strain

Query: 1 FNFEKRQPVA 10
F K+QP+A
Sbjct: 52 FGIRKKQPIA 61


>sp|RL5_METTH|LARGE ribosomal subunit protein uL5|Methanothermobacter

Query: 1 FNFEKRQPVA 10
F K+QP+A
Sbjct: 52 FGIRKKQPIA 61


>sp|PYRC_SACS2|DIHYDROOROTASE solfataricus (strain ATCC 35092

Query: 2 NFEKRQP 8
+FEK+QP
Sbjct: 265 SFEKQQP 271


>sp|TRET_THELN|TREHALOSE synthase|Thermococcus litoralis (strain ATCC 51850

Query: 3 FEKRQP 8
+EKRQP
Sbjct: 142 YEKRQP 147


>sp|TRET_PYRFU|TREHALOSE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FEKRQP 8
+EKRQP
Sbjct: 142 YEKRQP 147




269|SequenceR|1350|1341|SGAEPFNFEK

>sp|HOSA_PYRAB|HOMOCITRATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 SGAEPFNFEK 10
S EPF +EK
Sbjct: 342 SSREPFTWEK 351


>sp|GSA_METBF|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GAEPFNFEK 10
GAEP N+++
Sbjct: 363 GAEPHNYQE 371


>sp|GSA_METAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GAEPFNFEK 10
GAEP N+++
Sbjct: 363 GAEPHNYQE 371


>sp|GATE_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma volcanium (strain ATCC

Query: 1 SGAEPFNFEK 10
SG E + FE+
Sbjct: 30 SGTEKYRFER 39


>sp|SYDND_HALSA|ASPARTATE--TRNA(ASP/ASN) ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GAEPFNFE 9
G EP NFE
Sbjct: 381 GVEPENFE 388


>sp|MOBA_PYRFU|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus furiosus

Query: 3 AEPFNFEK 10
A PFN++K
Sbjct: 50 ASPFNWQK 57


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SGAEPFNFE 9
SG+ PF F+
Sbjct: 285 SGSVPFTFQ 293




270|SequenceR|1355|1346|LAGSSSGAEP

>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 LAGSSSGAEP 10
+A +SSG EP
Sbjct: 1478 IADTSSGIEP 1487


>sp|NDRZ_THEAC|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Thermoplasma

Query: 1 LAGSSSGAEP 10
+AG SS EP
Sbjct: 586 IAGCSSSIEP 595


>sp|SYDND_AERPE|ASPARTATE--TRNA(ASP/ASN) ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 AGSSSGAE 9
AG+ SGAE
Sbjct: 169 AGTESGAE 176


>sp|YPV5A_METTF|UNCHARACTERIZED protein ORF5A|Methanothermobacter thermautotrophicus

Query: 1 LAGSSSGAE 9
LAGSSS A+
Sbjct: 17 LAGSSSAAD 25




271|SequenceR|1360|1351|VASPFLAGSS

>sp|Y1051_ARCFU|UNCHARACTERIZED protein AF_1051|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VASPFLAGSS 10
VA FLAGS+
Sbjct: 23 VAYTFLAGST 32


>sp|UBIX_ARCFU|FLAVIN prenyltransferase UbiX|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VASPFLAGS 9
+A+PF +GS
Sbjct: 66 IAAPFASGS 74




272|SequenceR|1365|1356|LEPPSVASPF

>sp|SDX_THEAC|PROBABLE sulredoxin|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LEPPSVA 7
+EPPSVA
Sbjct: 78 IEPPSVA 84


>sp|LEUC2_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 3 PPSVASPF 10
PP VA PF
Sbjct: 231 PPMVAKPF 238


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LEPPSVASPF 10
L PPSV F
Sbjct: 476 LSPPSVVKAF 485


>sp|AROC_THEVO|CHORISMATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PPSVASPF 10
PP V PF
Sbjct: 214 PPGVGEPF 221


>sp|MCRAM_METAC|[METHYL coenzyme M reductase]-L-arginine

Query: 1 LEPPSVASPF 10
LE P + SPF
Sbjct: 259 LEDPLIGSPF 268


>sp|EF1A_HALSA|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 700922

Query: 2 EPPSVASPF 10
+PPSVA F
Sbjct: 309 DPPSVADTF 317


>sp|EF1A_HALS3|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 29341

Query: 2 EPPSVASPF 10
+PPSVA F
Sbjct: 309 DPPSVADTF 317


>sp|EF1A_HALMA|ELONGATION factor 1-alpha|Haloarcula marismortui (strain ATCC 43049

Query: 2 EPPSVASPF 10
+PPSVA F
Sbjct: 309 DPPSVAETF 317


>sp|EF1A_METST|ELONGATION factor 1-alpha|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 PPSVASPF 10
PPSVA F
Sbjct: 301 PPSVAKEF 308


>sp|EF1A_METBU|ELONGATION factor 1-alpha|Methanococcoides burtonii (strain DSM 6242

Query: 2 EPPSVASPF 10
+PPSVA F
Sbjct: 309 KPPSVADEF 317


>sp|EF1A_NATPD|ELONGATION factor 1-alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EPPSVASPF 10
+PPSVA F
Sbjct: 310 DPPSVAETF 318




273|SequenceR|1370|1361|HLRQRLEPPS

>sp|PYRI_STAMF|ASPARTATE carbamoyltransferase regulatory chain|Staphylothermus marinus

Query: 3 RQRLEPPS 10
+QR+EPPS
Sbjct: 101 KQRVEPPS 108


>sp|Y694_METJA|UNCHARACTERIZED NOP5 family protein MJ0694|Methanocaldococcus jannaschii (strain

Query: 1 HLRQRLEPP 9
HLR +EPP
Sbjct: 292 HLRMGVEPP 300


>sp|GGR2_METBU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanococcoides burtonii (strain DSM 6242

Query: 1 HLRQRLEP 8
HL+Q +EP
Sbjct: 53 HLKQHIEP 60


>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 HLRQRLEPP 9
HL Q+L PP
Sbjct: 83 HLSQKLAPP 91


>sp|Y692_METTH|UNCHARACTERIZED protein MTH_692|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 QRLEPP 9
QR+EPP
Sbjct: 158 QRIEPP 163


>sp|RL18_PICTO|LARGE ribosomal subunit protein uL18|Picrophilus torridus (strain ATCC

Query: 1 HLRQRLE 7
HL+QRL+
Sbjct: 142 HLKQRLD 148


>sp|SURE_METTH|5'-NUCLEOTIDASE SurE|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 HLRQRLEPPS 10
HLR + PPS
Sbjct: 230 HLRLKTPPPS 239


Query: 1 HLRQRLEP 8
H+++RL+P
Sbjct: 199 HIKKRLDP 206


>sp|RS8_NATPD|SMALL ribosomal subunit protein uS8|Natronomonas pharaonis (strain ATCC

Query: 1 HLRQRLEPPS 10
HL Q ++P S
Sbjct: 22 HLEQTIQPAS 31


>sp|TNAA_HALSA|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 700922

Query: 2 LRQRLEPP 9
LR+ +EPP
Sbjct: 303 LREAVEPP 310


>sp|TNAA_HALS3|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 29341

Query: 2 LRQRLEPP 9
LR+ +EPP
Sbjct: 303 LREAVEPP 310


>sp|RTCA_METKA|RNA 3'-terminal phosphate cyclase|Methanopyrus kandleri (strain AV19 /

Query: 2 LRQRLEPP 9
+R R+EPP
Sbjct: 166 VRARMEPP 173


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 1 HLRQRLE 7
HLR RLE
Sbjct: 1009 HLRDRLE 1015


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 HLRQRLE 7
H+R+RLE
Sbjct: 405 HMRKRLE 411




274|SequenceR|1375|1366|LLEVGHLRQR

>sp|HTPX2_SULAC|PROTEASE HtpX homolog 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 EVGHLRQR 10
E+GHLR R
Sbjct: 136 EIGHLRHR 143


>sp|Y2387_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 LLEVGHLRQR 10
L E+GHL++R
Sbjct: 129 LCEIGHLKER 138


>sp|HTPX2_SULTO|PROTEASE HtpX homolog 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 EVGHLRQR 10
E+GHLR +
Sbjct: 147 EIGHLRHK 154


>sp|HTPX_THEAC|PROTEASE HtpX homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 EVGHLRQR 10
E+GHLR R
Sbjct: 147 EMGHLRHR 154


>sp|HTPX_AERPE|PROTEASE HtpX homolog|Aeropyrum pernix (strain ATCC 700893

Query: 3 EVGHLRQR 10
EVGHL+ R
Sbjct: 135 EVGHLKHR 142


>sp|HTPX1_SACS2|PROTEASE HtpX homolog 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 EVGHLRQR 10
EVGH++ R
Sbjct: 138 EVGHIKHR 145


>sp|HTPX_SACI1|PROTEASE HtpX homolog|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 EVGHLRQR 10
E+GHL+ R
Sbjct: 148 ELGHLKHR 155


>sp|HTPX2_SACS2|PROTEASE HtpX homolog 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 EVGHLRQR 10
E+GHL+ R
Sbjct: 148 ELGHLKHR 155


>sp|PELO_META3|PROTEIN pelota homolog|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 EVGHLRQR 10
E+GH++ R
Sbjct: 156 EIGHIKSR 163


>sp|MOAC_THEON|PROBABLE cyclic pyranopterin monophosphate synthase|Thermococcus

Query: 1 LLEVGHLRQ 9
++EVGH R+
Sbjct: 14 MVEVGHKRE 22




275|SequenceR|1380|1371|KNFIKLLEVG

>sp|GATE_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanothermobacter thermautotrophicus

Query: 1 KNFIKLLEVG 10
++ IKLLEVG
Sbjct: 517 RDAIKLLEVG 526


>sp|ARFB_METST|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanosphaera stadtmanae (strain ATCC

Query: 1 KNFIKLLEVG 10
+NFIK EVG
Sbjct: 172 ENFIKHPEVG 181


>sp|OTC_METMJ|ORNITHINE carbamoyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KNFIKLLEVG 10
K+F+ +L++G
Sbjct: 3 KDFLSILDIG 12


>sp|GATD_NANEQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 KNFIKLLEV 9
KN++KLL V
Sbjct: 366 KNYVKLLYV 374


>sp|PUR5_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 FIKLLEVG 10
FI+L+E+G
Sbjct: 267 FIRLMEMG 274




276|SequenceR|1385|1376|GLKQNKNFIK

>sp|PGK_METMP|PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GLKQNKNFIK 10
G+ +NKNF+K
Sbjct: 335 GVFENKNFLK 344


>sp|AMPD_ARCFU|ANHYDROMEVALONATE phosphate decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GLKQNKNFI 9
G+K KNFI
Sbjct: 2 GIKTQKNFI 10


>sp|ARCSA_METAC|ARCHAEOSINE synthase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 3 KQNKNFIK 10
K+ KNFIK
Sbjct: 484 KEKKNFIK 491


>sp|ARFB_METST|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanosphaera stadtmanae (strain ATCC

Query: 2 LKQNKNFIK 10
LK+++NFIK
Sbjct: 168 LKEHENFIK 176


>sp|DAPA_META3|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GLKQNKNFI 9
GL+QN NF+
Sbjct: 21 GLEQNINFL 29


>sp|AMTAB_ARCFU|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Archaeoglobus

Query: 1 GLKQNKNFI 9
GL+ NK F+
Sbjct: 357 GLENNKRFV 365


>sp|Y1322_METST|UPF0280 protein Msp_1322|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 LKQNKNFIK 10
+K+N NF+K
Sbjct: 43 IKENPNFLK 51


>sp|RPO11_METMP|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanococcus maripaludis (strain

Query: 2 LKQNKNFIK 10
+++NKNFI+
Sbjct: 7 IEKNKNFIE 15


>sp|DAPA_METJA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLKQNKNFI 9
GL++N NF+
Sbjct: 22 GLEENINFL 30




277|SequenceR|1390|1381|STSSSGLKQN

***** No hits found ******


278|SequenceR|1395|1386|SLHPISTSSS

>sp|APE1_AERPE|HOMING endonuclease I-ApeI|Aeropyrum pernix (strain ATCC 700893

Query: 3 HPISTSS 9
HP+STSS
Sbjct: 82 HPLSTSS 88


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LHPIST 7
+HPIST
Sbjct: 90 IHPIST 95




279|SequenceR|1400|1391|KTPPSSLHPI

>sp|COBD_ARCFU|PROBABLE cobalamin biosynthesis protein CobD|Archaeoglobus fulgidus

Query: 3 PPSSLHPI 10
PP+ LHP+
Sbjct: 21 PPALLHPV 28


>sp|RSMA_METJA|PROBABLE ribosomal RNA small subunit|Methanocaldococcus jannaschii (strain

Query: 1 KTPPSSLHP 9
K PPS+ +P
Sbjct: 161 KVPPSAFYP 169


>sp|COBD_THEKO|PROBABLE cobalamin biosynthesis protein CobD|Thermococcus kodakarensis

Query: 3 PPSSLHPI 10
PP+ LHP+
Sbjct: 20 PPAKLHPV 27


>sp|COBD_PYRAB|PROBABLE cobalamin biosynthesis protein CobD|Pyrococcus abyssi (strain GE5

Query: 3 PPSSLHPI 10
PP+ +HP+
Sbjct: 20 PPAKIHPV 27


>sp|COBD_METTP|PROBABLE cobalamin biosynthesis protein CobD|Methanothrix thermoacetophila

Query: 3 PPSSLHPI 10
PP++LHP+
Sbjct: 24 PPAALHPV 31


>sp|COBD_METM7|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 3 PPSSLHPI 10
PP +HP+
Sbjct: 20 PPEKIHPV 27


>sp|COBD_METM5|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 3 PPSSLHPI 10
PP +HP+
Sbjct: 20 PPEKVHPV 27


>sp|COBD_METMP|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 3 PPSSLHPI 10
PP +HP+
Sbjct: 20 PPEKVHPV 27


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PSSLHPI 10
PS+LHPI
Sbjct: 618 PSNLHPI 624


>sp|UREND_METTH|DNA uridine endonuclease|Methanothermobacter thermautotrophicus

Query: 1 KTPPSSL 7
K PPSSL
Sbjct: 76 KVPPSSL 82


>sp|RSMA_METM5|PROBABLE ribosomal RNA small subunit|Methanococcus maripaludis (strain C5 /

Query: 1 KTPPSSLHP 9
K PPS+ P
Sbjct: 160 KVPPSAFSP 168


>sp|SYY_HALLT|TYROSINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 KTPPSSLH 8
+ PP+SLH
Sbjct: 192 REPPTSLH 199


>sp|RSMA_METMP|PROBABLE ribosomal RNA small subunit|Methanococcus maripaludis (strain DSM

Query: 1 KTPPSSLHP 9
K PPS+ P
Sbjct: 160 KVPPSAFSP 168


>sp|MTRH_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus vannielii (strain ATCC

Query: 2 TPPSSLHPI 10
T P+++HP+
Sbjct: 307 TTPAAVHPL 315


>sp|COBD_METTH|PROBABLE cobalamin biosynthesis protein CobD|Methanothermobacter

Query: 3 PPSSLHPI 10
PP LHP+
Sbjct: 20 PPHRLHPV 27


>sp|RSMA_METM7|PROBABLE ribosomal RNA small subunit|Methanococcus maripaludis (strain C7 /

Query: 1 KTPPSSLHP 9
K PPS+ P
Sbjct: 160 KVPPSAFSP 168


>sp|SYS_HYPBU|SERINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 KTPPSSLHPI 10
K P ++HP+
Sbjct: 446 KAPKDAIHPV 455


>sp|RSMA_METM6|PROBABLE ribosomal RNA small subunit|Methanococcus maripaludis (strain C6 /

Query: 1 KTPPSSLHP 9
K PPS+ P
Sbjct: 160 KVPPSAFSP 168


>sp|METXA_METFP|HOMOSERINE O-acetyltransferase|Methanobacterium formicicum (strain DSM 3637

Query: 2 TPPSSLHP 9
T PSSL+P
Sbjct: 104 TGPSSLNP 111


>sp|COBD_PYRHO|PROBABLE cobalamin biosynthesis protein CobD|Pyrococcus horikoshii (strain

Query: 3 PPSSLHPI 10
PP+ +HP+
Sbjct: 17 PPAVVHPV 24


>sp|COBD_PYRFU|PROBABLE cobalamin biosynthesis protein CobD|Pyrococcus furiosus (strain

Query: 3 PPSSLHPI 10
PP+ +HP+
Sbjct: 18 PPAIIHPV 25


>sp|TRPE3_HALMA|ANTHRANILATE synthase component 1 3|Haloarcula marismortui (strain ATCC 43049

Query: 2 TPPSSLHPI 10
T P+++HP+
Sbjct: 248 TAPAAVHPV 256


>sp|COBD_METVS|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus vannielii

Query: 3 PPSSLHPI 10
PP LHP+
Sbjct: 20 PPEKLHPV 27


>sp|DPHB_HALMA|DIPHTHINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 4 PSSLHPI 10
P SLHP+
Sbjct: 239 PGSLHPL 245




280|SequenceR|1405|1396|TSVFFKTPPS

>sp|FEN_THEAC|FLAP endonuclease 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 FFKTPP 9
FFK PP
Sbjct: 277 FFKNPP 282


>sp|FEN_THEVO|FLAP endonuclease 1|Thermoplasma volcanium (strain ATCC 51530

Query: 4 FFKTPP 9
FFK PP
Sbjct: 277 FFKNPP 282


>sp|AROD_METMA|3-DEHYDROQUINATE dehydratase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 FFKTPP 9
F KTPP
Sbjct: 137 FLKTPP 142


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 3 VFFKTPP 9
V F+TPP
Sbjct: 158 VIFQTPP 164


>sp|RF1_THEAC|PEPTIDE chain release factor subunit|Thermoplasma acidophilum (strain

Query: 4 FFKTPP 9
++KTPP
Sbjct: 82 YYKTPP 87


>sp|CDC6_METLZ|ORC1-TYPE DNA replication protein|Methanocorpusculum labreanum (strain ATCC

Query: 1 TSVFFKTP 8
T ++FK+P
Sbjct: 387 TEIYFKSP 394


>sp|RSMA_METMP|PROBABLE ribosomal RNA small subunit|Methanococcus maripaludis (strain DSM

Query: 1 TSVFFKTPP 9
T FKTPP
Sbjct: 241 TQRVFKTPP 249


>sp|DPCKG_PYRAB|GTP-DEPENDENT dephospho-CoA kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 VFFKTPPS 10
V FK PPS
Sbjct: 3 VLFKLPPS 10


>sp|RSMA_METM7|PROBABLE ribosomal RNA small subunit|Methanococcus maripaludis (strain C7 /

Query: 1 TSVFFKTPP 9
T FKTPP
Sbjct: 241 TERVFKTPP 249


>sp|RSMA_METM6|PROBABLE ribosomal RNA small subunit|Methanococcus maripaludis (strain C6 /

Query: 1 TSVFFKTPP 9
T FKTPP
Sbjct: 241 TERVFKTPP 249




281|SequenceR|1410|1401|SPQSPTSVFF

>sp|KDGK_SULTO|2-DEHYDRO-3-DEOXYGLUCONOKINASE tokodaii (strain DSM 16993

Query: 2 PQSPTSVFF 10
P +PT +FF
Sbjct: 83 PSAPTGIFF 91


>sp|RL4_HALSA|LARGE ribosomal subunit protein uL4|Halobacterium salinarum (strain ATCC

Query: 3 QSPTSVFF 10
Q PTS+ F
Sbjct: 189 QEPTSILF 196


>sp|RL4_HALS3|LARGE ribosomal subunit protein uL4|Halobacterium salinarum (strain ATCC

Query: 3 QSPTSVFF 10
Q PTS+ F
Sbjct: 189 QEPTSILF 196


>sp|ADEC_METAC|ADENINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SPQSPTSVFF 10
S +SP VFF
Sbjct: 98 SKRSPLKVFF 107


>sp|KDGK_THETE|2-DEHYDRO-3-DEOXYGLUCONOKINASE tenax

Query: 2 PQSPTSVFF 10
P +PT ++F
Sbjct: 98 PGAPTGIYF 106


>sp|METXA_HALLT|HOMOSERINE O-acetyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 PQSPTSVFF 10
P PT+ FF
Sbjct: 274 PPEPTAAFF 282


>sp|Y1472_METJA|UNCHARACTERIZED protein MJ1472|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SPQSPTSV 8
+PQSPT +
Sbjct: 214 NPQSPTEL 221




282|SequenceR|1415|1406|LHSKCSPQSP

>sp|PYRC_ARCFU|DIHYDROOROTASE fulgidus (strain ATCC 49558

Query: 1 LHSKC 5
LHSKC
Sbjct: 361 LHSKC 365




283|SequenceR|1420|1411|KTGTELHSKC

>sp|PYRC_HALSA|DIHYDROOROTASE salinarum (strain ATCC 700922

Query: 3 GTELHSKC 10
G +LHS C
Sbjct: 376 GDDLHSNC 383


>sp|TRPF2_METMA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TGTELHSKC 10
T +LHS C
Sbjct: 79 TSVQLHSDC 87


>sp|PYRC_ARCFU|DIHYDROOROTASE fulgidus (strain ATCC 49558

Query: 6 LHSKC 10
LHSKC
Sbjct: 361 LHSKC 365


>sp|ASPD_METBU|L-ASPARTATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 4 TELHSKC 10
T LH+KC
Sbjct: 82 TTLHAKC 88


>sp|GATE_PYRNV|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum neutrophilum (strain DSM

Query: 1 KTGTELH 7
KTG E+H
Sbjct: 9 KTGLEIH 15


>sp|GATE_PYRAR|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum arsenaticum (strain DSM

Query: 1 KTGTELH 7
KTG E+H
Sbjct: 9 KTGLEIH 15


>sp|GATE_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum aerophilum (strain ATCC

Query: 1 KTGTELH 7
KTG E+H
Sbjct: 9 KTGLEIH 15




284|SequenceR|1425|1416|VTEQDKTGTE

***** No hits found ******


285|SequenceR|1430|1421|TAKSCVTEQD

>sp|Y1428_METMA|UPF0228 protein MM_1428|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 AKSCVTEQD 10
K+C+TE+D
Sbjct: 159 GKNCITEKD 167


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 SCVTEQD 10
+CVT+QD
Sbjct: 324 TCVTDQD 330


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 SCVTEQD 10
+CVT+QD
Sbjct: 324 TCVTDQD 330


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 SCVTEQD 10
+CVT+QD
Sbjct: 324 TCVTDQD 330


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 SCVTEQD 10
+CVT+QD
Sbjct: 324 TCVTDQD 330


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 SCVTEQD 10
+CVT+QD
Sbjct: 324 TCVTDQD 330


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 SCVTEQD 10
+CVT+QD
Sbjct: 324 TCVTDQD 330


>sp|SIHH_METJA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KSCVTEQD 10
++CVTE D
Sbjct: 314 RNCVTEYD 321


>sp|Y401_METMA|UPF0228 protein MM_0401|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 AKSCVTEQD 10
K+CV E+D
Sbjct: 146 GKNCVLEKD 154




286|SequenceR|1435|1426|TNDGETAKSC

>sp|GGGPS_METBU|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 DGETAKSC 10
DG+TAK C
Sbjct: 207 DGKTAKIC 214


>sp|AROB_THEVO|3-DEHYDROQUINATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 NDGETAKS 9
NDGE+ KS
Sbjct: 69 NDGESLKS 76


>sp|AROB_PICTO|3-DEHYDROQUINATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 NDGETAKS 9
+DGE AKS
Sbjct: 57 DDGERAKS 64


>sp|RRP4_PYRHO|EXOSOME complex component Rrp4|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NDGETAKS 9
NDGET ++
Sbjct: 258 NDGETRRT 265


>sp|THIC1_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DGETAKSC 10
D ET +SC
Sbjct: 26 DAETVRSC 33




287|SequenceR|1440|1431|FAGFETNDGE

>sp|COFH1_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina barkeri (strain

Query: 1 FAGFETNDGE 10
F F TNDG+
Sbjct: 70 FCAFRTNDGK 79


>sp|SYFB_PYRHO|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FAGFETNDGE 10
+G E NDGE
Sbjct: 293 LSGLELNDGE 302


>sp|RL11_HALMA|LARGE ribosomal subunit protein uL11|Haloarcula marismortui (strain

Query: 2 AGFETNDGE 10
AGFET GE
Sbjct: 79 AGFETGSGE 87


>sp|RL11_HALLT|LARGE ribosomal subunit protein uL11|Halorubrum lacusprofundi (strain

Query: 2 AGFETNDGE 10
AGFET GE
Sbjct: 79 AGFETGSGE 87


>sp|Y658_METJA|UNCHARACTERIZED protein MJ0658|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FAGFETNDG 9
F GFE DG
Sbjct: 252 FTGFEMRDG 260


>sp|COFH1_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina acetivorans (strain

Query: 1 FAGFETNDGE 10
F F TN+G+
Sbjct: 70 FCAFRTNNGK 79


>sp|SYR_METMA|ARGININE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 AGFETNDGE 10
AGFE D E
Sbjct: 20 AGFEVEDSE 28


>sp|TRPB_DESA1|TRYPTOPHAN synthase beta chain|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 FAGFETNDGE 10
F G+ N+GE
Sbjct: 277 FIGYNYNNGE 286


>sp|SYFB_THEKO|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FAGFETNDGE 10
AG E +DGE
Sbjct: 293 LAGLELSDGE 302


>sp|PGMUT_SULTO|PHOSPHOGLUCOSAMINE/PHOSPHOGALACTOSAMINE mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FAGFETNDG 9
AGFE N G
Sbjct: 322 LAGFEENGG 330


>sp|RTCB_ARCFU|TRNA-SPLICING ligase RtcB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AGFETNDG 9
AGF+ N+G
Sbjct: 80 AGFDVNEG 87


>sp|COFH1_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina mazei (strain ATCC

Query: 1 FAGFETNDGE 10
F F T+DG+
Sbjct: 70 FCAFRTDDGK 79


>sp|SYP_METMP|PROLINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 4 FETNDGE 10
FET DGE
Sbjct: 235 FETPDGE 241


>sp|SYP_METM6|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 4 FETNDGE 10
FET DGE
Sbjct: 235 FETPDGE 241


>sp|DGGGP_METS3|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 FAGFETNDG 9
FAG+ N+G
Sbjct: 145 FAGYTFNEG 153


>sp|SYP_METM7|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 4 FETNDGE 10
FET DGE
Sbjct: 235 FETPDGE 241


>sp|SYP_METM5|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 4 FETNDGE 10
FET DGE
Sbjct: 235 FETPDGE 241


>sp|IF6_METMJ|TRANSLATION initiation factor 6|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FAGFETNDG 9
AGF TN G
Sbjct: 144 MAGFATNKG 152


>sp|PYRG_NATPD|CTP synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 AGFETN 7
AGFETN
Sbjct: 326 AGFETN 331


>sp|PCNA_METAR|DNA polymerase sliding clamp|Methanocella arvoryzae (strain DSM 22066

Query: 1 FAGFETNDGE 10
F FE DGE
Sbjct: 56 FDTFEATDGE 65


>sp|ARGC_METPE|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 GFETNDG 9
GF+ NDG
Sbjct: 314 GFKENDG 320




288|SequenceR|1445|1436|DRHGVFAGFE

>sp|NCSA_HALVD|TRNA 2-thiolation protein NcsA|Haloferax volcanii (strain ATCC 29605

Query: 2 RHGVFAGFE 10
RH + AG+E
Sbjct: 268 RHSIMAGYE 276


>sp|COBQ_METST|PROBABLE cobyric acid synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 HGVFAGFE 10
HG+F FE
Sbjct: 440 HGIFHNFE 447


>sp|TRPG1_HALMA|ANTHRANILATE synthase component II|Haloarcula marismortui (strain ATCC 43049

Query: 1 DRHGVFAGFE 10
D GVFAG E
Sbjct: 127 DGKGVFAGLE 136


>sp|HMC1_METTE|CHROMOSOMAL protein MC1|Methanosarcina thermophila

Query: 1 DRHGVFAG 8
+ HGVF G
Sbjct: 14 NEHGVFTG 21


>sp|Y663_PYRAB|PROBABLE S-adenosyl-L-methionine-binding protein PYRAB06630|Pyrococcus

Query: 1 DRHGVFA 7
++HGVFA
Sbjct: 81 EKHGVFA 87


>sp|HMC1_METBA|CHROMOSOMAL protein MC1|Methanosarcina barkeri

Query: 1 DRHGVFAG 8
+ HGVF G
Sbjct: 14 NEHGVFTG 21


>sp|COBQ_PYRFU|PROBABLE cobyric acid synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 HGVFAGFE 10
HG+F FE
Sbjct: 425 HGIFHNFE 432


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 4 GVFAGFE 10
G+++GFE
Sbjct: 480 GIYSGFE 486


>sp|TRPG_HALVD|ANTHRANILATE synthase component 2|Haloferax volcanii (strain ATCC 29605

Query: 1 DRHGVFAGFE 10
D GVFAG E
Sbjct: 119 DGAGVFAGLE 128


>sp|Y1856_ARCFU|UNCHARACTERIZED protein AF_1856|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 VFAGFE 10
+FAGFE
Sbjct: 318 IFAGFE 323


>sp|AMYA_PYRHO|ALPHA-AMYLASE horikoshii (strain ATCC 700860

Query: 3 HGVFAG 8
HGVF G
Sbjct: 358 HGVFGG 363


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 3 HGVFAG 8
HGVF G
Sbjct: 358 HGVFGG 363


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 3 HGVFAG 8
HGVF G
Sbjct: 358 HGVFGG 363




289|SequenceR|1450|1441|QLDMSDRHGV

>sp|TIAS_THEPD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermofilum pendens (strain

Query: 3 DMSDRHG 9
D+S+RHG
Sbjct: 86 DLSERHG 92


>sp|FAU1_THEKO|PROBABLE ribonuclease FAU-1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 DMSDRHGV 10
D DRHGV
Sbjct: 56 DKKDRHGV 63


>sp|VHTC_METMA|F420 non-reducing hydrogenase II cytochrome|Methanosarcina mazei (strain

Query: 3 DMSDRHGV 10
D+SDRH V
Sbjct: 235 DLSDRHFV 242


>sp|DPO4_HALSA|DNA polymerase IV|Halobacterium salinarum (strain ATCC 700922

Query: 2 LDMSDRHGV 10
LD++D HGV
Sbjct: 202 LDVADLHGV 210


>sp|DPO4_HALS3|DNA polymerase IV|Halobacterium salinarum (strain ATCC 29341

Query: 2 LDMSDRHGV 10
LD++D HGV
Sbjct: 202 LDVADLHGV 210


>sp|SAND_THEX5|S-ADENOSYLMETHIONINE-DEPENDENT nucleotide dehydratase|Thermoplasmatales archaeon (strain ISO4-H5)

Query: 3 DMSDRHGV 10
DM+ RHG+
Sbjct: 141 DMAHRHGI 148


>sp|NUCS_PYRAB|ENDONUCLEASE NucS|Pyrococcus abyssi (strain GE5 /

Query: 2 LDMSDRHG 9
LD++++HG
Sbjct: 19 LDLAEKHG 26


>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LDMSDRHGV 10
+DM D HG+
Sbjct: 450 IDMYDSHGI 458


>sp|NUCS_PYRHO|ENDONUCLEASE NucS|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LDMSDRHG 9
LD++++HG
Sbjct: 19 LDIAEKHG 26


>sp|ADEC_METBU|ADENINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 5 SDRHGV 10
SDRHG+
Sbjct: 417 SDRHGI 422


>sp|G6PI_NATPD|PROBABLE glucose-6-phosphate isomerase|Natronomonas pharaonis (strain ATCC

Query: 1 QLDMSDRHGV 10
+LD D HGV
Sbjct: 360 ELDSLDAHGV 369


>sp|TRMBR_HALSA|HTH-TYPE sugar sensing transcriptional regulator|Halobacterium salinarum

Query: 3 DMSDRHGV 10
D SDR+GV
Sbjct: 216 DDSDRYGV 223




290|SequenceR|1455|1446|TEKFRQLDMS

>sp|RL4_PYRAE|LARGE ribosomal subunit protein uL4|Pyrobaculum aerophilum (strain ATCC

Query: 3 KFRQLDMS 10
KF+QLD+S
Sbjct: 8 KFKQLDLS 15


>sp|Y1416_METJA|UNCHARACTERIZED protein MJ1416|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TEKFRQLD 8
TEKFR++D
Sbjct: 55 TEKFREID 62


>sp|HIS5_METKA|IMIDAZOLE glycerol phosphate synthase subunit|Methanopyrus kandleri (strain

Query: 1 TEKFRQLD 8
TE+FR+ D
Sbjct: 126 TEEFREFD 133


>sp|FENR_PICTO|FERREDOXIN--NADP reductase|Picrophilus torridus (strain ATCC 700027

Query: 1 TEKFRQLDMS 10
TEKFR L ++
Sbjct: 145 TEKFRDLTVA 154




291|SequenceR|1460|1451|KIKNSTEKFR

>sp|Y696_METJA|UNCHARACTERIZED protein MJ0696|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IKNSTEKFR 10
IKN EKFR
Sbjct: 171 IKNQIEKFR 179


>sp|NUSA_METVS|PROBABLE transcription termination protein NusA|Methanococcus vannielii

Query: 2 IKNSTEKF 9
+KN+T+KF
Sbjct: 54 VKNATDKF 61


>sp|SPEE_THEAC|POLYAMINE aminopropyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IKNSTEKF 9
+KN++EKF
Sbjct: 145 VKNTSEKF 152


>sp|Y1085_PICTO|PUTATIVE adenine deaminase PTO1085|Picrophilus torridus (strain ATCC 700027

Query: 2 IKNSTEKFR 10
++N TE+FR
Sbjct: 513 VRNITEEFR 521


>sp|Y2262_ARCFU|UNCHARACTERIZED protein AF_2262|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KIKNSTEKFR 10
K+K + EK+R
Sbjct: 39 KLKEAAEKYR 48




292|SequenceR|1465|1456|NNSLIKIKNS

>sp|RS8_PYRIL|SMALL ribosomal subunit protein uS8|Pyrobaculum islandicum (strain DSM

Query: 1 NNSLIKIKNS 10
+N+LI+IKN+
Sbjct: 8 SNALIQIKNA 17


>sp|RS8_PYRAR|SMALL ribosomal subunit protein uS8|Pyrobaculum arsenaticum (strain DSM

Query: 1 NNSLIKIKNS 10
+N+LI+IKN+
Sbjct: 8 SNALIQIKNA 17


>sp|RS8_PYRNV|SMALL ribosomal subunit protein uS8|Pyrobaculum neutrophilum (strain

Query: 1 NNSLIKIKNS 10
+N+LI+IKN+
Sbjct: 8 SNALIQIKNA 17


>sp|RS8_PYRAE|SMALL ribosomal subunit protein uS8|Pyrobaculum aerophilum (strain ATCC

Query: 1 NNSLIKIKNS 10
+N+LI+IKN+
Sbjct: 8 SNALIQIKNA 17


>sp|SRP54_META3|SIGNAL recognition particle 54 kDa|Methanococcus aeolicus (strain ATCC

Query: 1 NNSLIKIKNS 10
NN+L KIKN+
Sbjct: 10 NNALSKIKNA 19


>sp|HPPA2_METMA|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Methanosarcina mazei (strain

Query: 2 NSLIKIKN 9
NSLIK+ N
Sbjct: 648 NSLIKVVN 655




293|SequenceR|1470|1461|NESTNNNSLI

***** No hits found ******


294|SequenceR|1475|1466|VRKLTNESTN

>sp|CARA_PYRFU|CARBAMOYL phosphate synthase small chain|Pyrococcus furiosus (strain ATCC

Query: 1 VRKLTNESTN 10
+RK++ ESTN
Sbjct: 156 IRKISYESTN 165


>sp|RL7A_METS5|LARGE ribosomal subunit protein eL8|Metallosphaera sedula (strain ATCC

Query: 1 VRKLTNEST 9
+RK TNE+T
Sbjct: 32 IRKGTNEAT 40


>sp|THIE_PYRHO|THIAMINE-PHOSPHATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VRKLTNE 7
+RKLTNE
Sbjct: 54 IRKLTNE 60


>sp|RL7A_THEON|LARGE ribosomal subunit protein eL8|Thermococcus onnurineus (strain

Query: 1 VRKLTNEST 9
+RK TNE+T
Sbjct: 32 IRKGTNETT 40


>sp|RL7A_THEKO|LARGE ribosomal subunit protein eL8|Thermococcus kodakarensis (strain

Query: 1 VRKLTNEST 9
+RK TNE+T
Sbjct: 32 IRKGTNETT 40


>sp|RL7A_METKA|LARGE ribosomal subunit protein eL8|Methanopyrus kandleri (strain AV19

Query: 1 VRKLTNEST 9
+RK TNE+T
Sbjct: 32 IRKGTNETT 40


>sp|Y800_METJA|UNCHARACTERIZED protein MJ0800|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VRKLTNESTN 10
VRKL ++TN
Sbjct: 98 VRKLIQQNTN 107


>sp|RL7A_THEGJ|LARGE ribosomal subunit protein eL8|Thermococcus gammatolerans (strain

Query: 1 VRKLTNEST 9
+RK TNE+T
Sbjct: 32 IRKGTNETT 40


>sp|RL7A_PYRFU|LARGE ribosomal subunit protein eL8|Pyrococcus furiosus (strain ATCC

Query: 1 VRKLTNEST 9
+RK TNE+T
Sbjct: 32 IRKGTNETT 40


>sp|RL7A_PYRHO|LARGE ribosomal subunit protein eL8|Pyrococcus horikoshii (strain ATCC

Query: 1 VRKLTNEST 9
+RK TNE+T
Sbjct: 32 IRKGTNETT 40


>sp|RL7A_PYRAB|LARGE ribosomal subunit protein eL8|Pyrococcus abyssi (strain GE5 /

Query: 1 VRKLTNEST 9
+RK TNE+T
Sbjct: 32 IRKGTNETT 40


>sp|AGOG_PYRHO|N-GLYCOSYLASE/DNA lyase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RKLTNE 7
RKLTNE
Sbjct: 182 RKLTNE 187




295|SequenceR|1480|1471|GALSSVRKLT

>sp|IF2B_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 GALSSVRKL 9
GA SSVR+L
Sbjct: 129 GAWSSVRRL 137


>sp|RFCS2_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GALSSVRKL 9
GAL+ +RKL
Sbjct: 307 GALAKIRKL 315


>sp|Y280_METAC|UNCHARACTERIZED solute-binding protein MA_0280|Methanosarcina acetivorans (strain

Query: 1 GALSSVRKLT 10
G+ SVRK+T
Sbjct: 77 GSAQSVRKIT 86


>sp|RFCS2_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GALSSVRKL 9
GAL+ VR+L
Sbjct: 307 GALAKVRRL 315




296|SequenceR|1485|1476|HCDTFGALSS

>sp|LEUC_PICTO|3-ISOPROPYLMALATE dehydratase large subunit|Picrophilus torridus (strain ATCC 700027

Query: 1 HCDTFGALS 9
H +T+GALS
Sbjct: 120 HTNTYGALS 128


>sp|MCRAM_METAC|[METHYL coenzyme M reductase]-L-arginine

Query: 1 HCDTFGAL 8
HC+ +GA+
Sbjct: 172 HCEVYGAI 179


>sp|THIL_METHJ|THIAMINE-MONOPHOSPHATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 CDTFGAL 8
CDT+GA+
Sbjct: 100 CDTYGAV 106


>sp|BIOA_METJA|ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HCDTFGALS 9
H DT GA+S
Sbjct: 151 HGDTVGAMS 159


>sp|ECFA2_METHJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanospirillum hungatei

Query: 2 CDTFGALSS 10
CDT G + S
Sbjct: 313 CDTIGVMGS 321


>sp|IF2P_PYRNV|PROBABLE translation initiation factor IF-2|Pyrobaculum neutrophilum (strain

Query: 3 DTFGALSS 10
DTFG L S
Sbjct: 363 DTFGTLES 370


>sp|IF2P_PYRIL|PROBABLE translation initiation factor IF-2|Pyrobaculum islandicum (strain

Query: 3 DTFGALSS 10
DTFG L S
Sbjct: 363 DTFGTLES 370


>sp|IF2P_PYRCJ|PROBABLE translation initiation factor IF-2|Pyrobaculum calidifontis (strain

Query: 3 DTFGALSS 10
DTFG L S
Sbjct: 365 DTFGTLES 372


>sp|IF2P_PYRAR|PROBABLE translation initiation factor IF-2|Pyrobaculum arsenaticum (strain

Query: 3 DTFGALSS 10
DTFG L S
Sbjct: 364 DTFGTLES 371


>sp|IF2P_PYRAE|PROBABLE translation initiation factor IF-2|Pyrobaculum aerophilum (strain

Query: 3 DTFGALSS 10
DTFG L S
Sbjct: 364 DTFGTLES 371


>sp|Y2966_METMA|UPF0282 protein MM_2966|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CDTFGALS 9
C++FGA S
Sbjct: 8 CESFGARS 15


>sp|AROA_METTP|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanothrix thermoacetophila (strain

Query: 2 CDTFGA 7
CD FGA
Sbjct: 54 CDAFGA 59


>sp|Y138_METJA|PUTATIVE glutamine amidotransferase-like protein MJ0138|Methanocaldococcus

Query: 1 HCDTFG 6
HC T+G
Sbjct: 131 HCHTYG 136


>sp|AMZA_SACI7|ARCHAEMETZINCIN islandicus (strain Y.G.57.14 /

Query: 1 HCDTFGAL 8
HC+T G +
Sbjct: 141 HCNTIGCV 148


>sp|AMZA_SACI6|ARCHAEMETZINCIN islandicus (strain M.16.4 /

Query: 1 HCDTFGAL 8
HC+T G +
Sbjct: 141 HCNTIGCV 148


>sp|AMZA_SACI4|ARCHAEMETZINCIN islandicus (strain M.14.25 /

Query: 1 HCDTFGAL 8
HC+T G +
Sbjct: 141 HCNTIGCV 148


>sp|AMZA_SACI3|ARCHAEMETZINCIN islandicus (strain M.16.27) (Sulfolobus

Query: 1 HCDTFGAL 8
HC+T G +
Sbjct: 141 HCNTIGCV 148


>sp|AMZA_SACI2|ARCHAEMETZINCIN islandicus (strain L.S.2.15 /

Query: 1 HCDTFGAL 8
HC+T G +
Sbjct: 141 HCNTIGCV 148


>sp|AMZA_SACI1|ARCHAEMETZINCIN islandicus (strain Y.N.15.51 /

Query: 1 HCDTFGAL 8
HC+T G +
Sbjct: 141 HCNTIGCV 148




297|SequenceR|1490|1481|PISTRHCDTF

>sp|NPD2_ARCFU|NAD-DEPENDENT protein deacylase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 RHCDTF 10
+HCD F
Sbjct: 182 KHCDAF 187


>sp|RL22_NANEQ|LARGE ribosomal subunit protein uL22|Nanoarchaeum equitans (strain

Query: 1 PISTRH 6
PIST+H
Sbjct: 19 PISTKH 24


>sp|BIOW_METSF|6-CARBOXYHEXANOATE--COA ligase|Methanocaldococcus sp. (strain FS406-22)

Query: 1 PISTRHC 7
PI T HC
Sbjct: 67 PIKTIHC 73


>sp|BIOW_METJA|6-CARBOXYHEXANOATE--COA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PISTRHC 7
PI T HC
Sbjct: 71 PIKTIHC 77


>sp|NFI_THEAC|BIFUNCTIONAL methyltransferase/endonuclease|Thermoplasma acidophilum (strain

Query: 2 ISTRHCDT 9
+STRH +T
Sbjct: 300 LSTRHAET 307


>sp|Y2274_HALSA|UPF0213 protein VNG_2274C|Halobacterium salinarum (strain ATCC 700922

Query: 1 PISTRHCDTF 10
P++ RH ++F
Sbjct: 43 PVTLRHTESF 52


>sp|Y264_METJA|UNCHARACTERIZED protein MJ0264|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PISTRHCD 8
PI HCD
Sbjct: 46 PIKCMHCD 53




298|SequenceR|1495|1486|QKSHVPISTR

>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 QKSHVPISTR 10
+K HVP+ R
Sbjct: 70 EKGHVPVEPR 79




299|SequenceR|1500|1491|SIKEAQKSHV

>sp|RS8E_STAMF|SMALL ribosomal subunit protein eS8|Staphylothermus marinus (strain

Query: 1 SIKEAQK 7
S+KEAQK
Sbjct: 38 SVKEAQK 44


>sp|AGLC_METVO|DOLICHYL N-acetyl-alpha-D-glucosaminyl phosphate

Query: 2 IKEAQKSH 9
IKE QK H
Sbjct: 51 IKELQKKH 58


>sp|COFC_METPS|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocella paludicola (strain DSM 17711

Query: 2 IKEAQKSHV 10
IKE QK HV
Sbjct: 123 IKEPQKYHV 131




300|SequenceR|1505|1496|TSPRRSIKEA

>sp|CBIA_METAC|COBYRINATE a,c-diamide synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 SPRRSIKEA 10
S RRSIKEA
Sbjct: 336 SMRRSIKEA 344


>sp|MCRX_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 TSPRRSI 7
TSPR+SI
Sbjct: 525 TSPRKSI 531


>sp|MCRX_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 TSPRRSI 7
TSPR+SI
Sbjct: 525 TSPRKSI 531


>sp|GFCR_ARCFU|TRANSCRIPTIONAL regulator GfcR|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TSPRRSIKEA 10
TS RSIKEA
Sbjct: 146 TSTGRSIKEA 155


>sp|M556_METJA|METHYLATED protein MJ0556|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TSPRRSIKE 9
T+P ++IKE
Sbjct: 36 TTPEKTIKE 44




301|SequenceR|1510|1501|EHTDETSPRR

>sp|Y1506_METJA|UNCHARACTERIZED protein MJ1506|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HTDETSPRR 10
H DE +P R
Sbjct: 139 HVDENAPSR 147


>sp|Y1561_METJA|UNCHARACTERIZED protein MJ1561|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HTDETSPRR 10
H DE +P R
Sbjct: 98 HVDENAPSR 106


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EHTDETSP 8
EH DE++P
Sbjct: 587 EHIDESTP 594


>sp|SUFS_HALVD|CYSTEINE desulfurase|Haloferax volcanii (strain ATCC 29605

Query: 1 EHTDETSP 8
EH D+T+P
Sbjct: 34 EHDDDTTP 41




302|SequenceR|1515|1506|AKSDVEHTDE

>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KSDVEHTD 9
K+D+EH D
Sbjct: 249 KTDIEHKD 256


>sp|RTCA_HALSA|RNA 3'-terminal phosphate cyclase|Halobacterium salinarum (strain ATCC

Query: 4 DVEHTDE 10
D+EHTD+
Sbjct: 326 DIEHTDD 332


>sp|RTCA_HALS3|RNA 3'-terminal phosphate cyclase|Halobacterium salinarum (strain ATCC

Query: 4 DVEHTDE 10
D+EHTD+
Sbjct: 326 DIEHTDD 332


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KSDVEHTD 9
K+D+EH D
Sbjct: 249 KTDIEHKD 256


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 KSDVEHTDE 10
++ +EHTDE
Sbjct: 284 QAGIEHTDE 292


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 KSDVEHTDE 10
++ +EHTDE
Sbjct: 284 QAGIEHTDE 292


>sp|SYE_METBU|GLUTAMATE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 KSDVEHTD 9
K+D+EH D
Sbjct: 249 KTDIEHKD 256


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 VEHTDE 10
VEHTDE
Sbjct: 114 VEHTDE 119


>sp|FSR_METJA|COENZYME F420-dependent sulfite reductase|Methanocaldococcus jannaschii

Query: 1 AKSDVEHTD 9
AKSD+E D
Sbjct: 77 AKSDIEGQD 85




303|SequenceR|1520|1511|DPILAAKSDV

>sp|GATD_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanobrevibacter smithii (strain ATCC

Query: 1 DPILAAKSDV 10
D ++AAKSD+
Sbjct: 219 DSVVAAKSDI 228


>sp|RL3_METBF|LARGE ribosomal subunit protein uL3|Methanosarcina barkeri (strain Fusaro

Query: 1 DPILAAKSDV 10
DPI A K+D+
Sbjct: 313 DPIRAKKADL 322


>sp|RL3_METMA|LARGE ribosomal subunit protein uL3|Methanosarcina mazei (strain ATCC

Query: 1 DPILAAKSDV 10
DPI A K+D+
Sbjct: 313 DPIRAKKADL 322


>sp|RL3_METAC|LARGE ribosomal subunit protein uL3|Methanosarcina acetivorans (strain

Query: 1 DPILAAKSDV 10
DPI A K+D+
Sbjct: 313 DPIRAKKADL 322


>sp|RPO11_METBF|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanosarcina barkeri (strain

Query: 1 DPILAAKSD 9
DPIL K+D
Sbjct: 52 DPILYIKTD 60


>sp|RPO11_METAC|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanosarcina acetivorans (strain

Query: 1 DPILAAKSD 9
DPIL K+D
Sbjct: 52 DPILYIKTD 60




304|SequenceR|1525|1516|RDQLWDPILA

>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 RDQLWDP 7
+D+LW+P
Sbjct: 991 KDELWEP 997


>sp|GYRB_HALVD|DNA gyrase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 2 DQLWDPIL 9
DQLWD +
Sbjct: 583 DQLWDTTM 590


>sp|GYRB_HALL2|DNA gyrase subunit B|Haloferax lucentense (strain DSM 14919

Query: 2 DQLWDPIL 9
DQLWD +
Sbjct: 583 DQLWDTTM 590


>sp|Y1056_AERPE|PROTEIN APE_1056.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 DQLWDPIL 9
D+ WDPIL
Sbjct: 165 DEGWDPIL 172


>sp|OFOB_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Saccharolobus solfataricus (Sulfolobus

Query: 2 DQLWDPIL 9
D WDPI+
Sbjct: 219 DPSWDPIV 226


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 2 DQLWDPIL 9
DQ WD +L
Sbjct: 534 DQFWDFVL 541


>sp|OFOB1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 2 DQLWDPIL 9
D WDPI+
Sbjct: 223 DPSWDPIV 230


>sp|Y1395_METJA|UNCHARACTERIZED protein MJ1395|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QLWDPI 8
Q+W+PI
Sbjct: 17 QVWEPI 22


>sp|SYH_METHJ|HISTIDINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 RDQLWDPIL 9
RD L DP++
Sbjct: 199 RDDLCDPLI 207


>sp|HIS3_HALSA|PHOSPHORIBOSYL-AMP cyclohydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 1 RDQLWD 6
RD+LW+
Sbjct: 62 RDELWE 67


>sp|HIS3_HALS3|PHOSPHORIBOSYL-AMP cyclohydrolase|Halobacterium salinarum (strain ATCC 29341

Query: 1 RDQLWD 6
RD+LW+
Sbjct: 62 RDELWE 67


>sp|Y424_METJA|UNCHARACTERIZED protein MJ0424|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QLWDPILA 10
++WD ILA
Sbjct: 73 KIWDGILA 80




305|SequenceR|1530|1521|ERNSPRDQLW

>sp|Y4021_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 5 PRDQLW 10
PR QLW
Sbjct: 180 PRTQLW 185


>sp|SECY_HALVD|PROTEIN translocase subunit SecY|Haloferax volcanii (strain ATCC 29605

Query: 3 NSPRDQL 9
N+PRDQ+
Sbjct: 104 NNPRDQV 110


>sp|CBIA_METS3|COBYRINATE a,c-diamide synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 SPRDQLW 10
SPR+ +W
Sbjct: 231 SPREDIW 237


>sp|RS6E_SULTO|SMALL ribosomal subunit protein eS6|Sulfurisphaera tokodaii (strain DSM

Query: 1 ERNSPRDQLW 10
+ N P D++W
Sbjct: 84 DNNVPSDEVW 93


>sp|END4_METPE|PROBABLE endonuclease 4|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 SPRDQLW 10
SP++++W
Sbjct: 76 SPKEEIW 82


>sp|Y2167_ARCFU|UNCHARACTERIZED protein AF_2167|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ERNSPRDQLW 10
E+N P+D W
Sbjct: 141 EKNRPKDYPW 150




306|SequenceR|1535|1526|EESPMERNSP

>sp|Y2167_ARCFU|UNCHARACTERIZED protein AF_2167|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ESPMERNSP 10
ES ME+N P
Sbjct: 137 ESSMEKNRP 145


>sp|DNLJ_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ESPMERNSP 10
ESP+ER+ P
Sbjct: 433 ESPLERDGP 441


>sp|Y1639_METJA|UNCHARACTERIZED protein MJ1639|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PMERNSP 10
P+++NSP
Sbjct: 35 PLDKNSP 41




307|SequenceR|1540|1531|GNLTGEESPM

>sp|FSR_METJA|COENZYME F420-dependent sulfite reductase|Methanocaldococcus jannaschii

Query: 1 GNLTGEESPM 10
G LTG E P+
Sbjct: 412 GLLTGSEGPL 421


>sp|RL6_METAC|LARGE ribosomal subunit protein uL6|Methanosarcina acetivorans (strain

Query: 1 GNLTGEESP 9
GN GE+ P
Sbjct: 109 GNFLGEKKP 117


>sp|COBS_HALLT|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 LTGEESP 9
LTGE SP
Sbjct: 175 LTGESSP 181


>sp|RL6_METMA|LARGE ribosomal subunit protein uL6|Methanosarcina mazei (strain ATCC

Query: 1 GNLTGEESP 9
GN GE+ P
Sbjct: 109 GNFLGEKKP 117


>sp|RL6_METBF|LARGE ribosomal subunit protein uL6|Methanosarcina barkeri (strain Fusaro

Query: 1 GNLTGEESP 9
GN GE+ P
Sbjct: 110 GNFLGEKKP 118




308|SequenceR|1545|1536|FPSTLGNLTG

>sp|ENO_HALWD|ENOLASE walsbyi (strain DSM 16790

Query: 1 FPSTLGNLTG 10
FP+ LGN+ G
Sbjct: 133 FPTPLGNVVG 142


>sp|ENO_HALMA|ENOLASE marismortui (strain ATCC 43049

Query: 1 FPSTLGNLTG 10
+P+ LGN+ G
Sbjct: 133 YPTPLGNIIG 142


>sp|ENO_NATPD|ENOLASE pharaonis (strain ATCC 35678

Query: 1 FPSTLGNLTG 10
FP LGN+ G
Sbjct: 133 FPVPLGNVIG 142


>sp|ENO_HALLT|ENOLASE lacusprofundi (strain ATCC 49239

Query: 1 FPSTLGNLTG 10
FP LGN+ G
Sbjct: 132 FPIPLGNVVG 141


>sp|ENO_HALSA|ENOLASE salinarum (strain ATCC 700922

Query: 1 FPSTLGNLTG 10
FP LGN+ G
Sbjct: 133 FPVPLGNVLG 142


>sp|ENO_HALS3|ENOLASE salinarum (strain ATCC 29341

Query: 1 FPSTLGNLTG 10
FP LGN+ G
Sbjct: 133 FPVPLGNVLG 142


>sp|FDHC_METFO|PROBABLE formate transporter|Methanobacterium formicicum

Query: 2 PSTLGNLTG 10
P+TLGN+ G
Sbjct: 250 PATLGNIVG 258


>sp|COOS1_METAC|CARBON monoxide dehydrogenase 1|Methanosarcina acetivorans (strain ATCC

Query: 4 TLGNLTG 10
+LGNLTG
Sbjct: 344 SLGNLTG 350


>sp|ISF3_ARCFU|IRON-SULFUR flavoprotein AF_1896|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PSTLGNLTG 10
P+ GN+TG
Sbjct: 81 PTYFGNVTG 89


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FPSTLG 6
FPST+G
Sbjct: 84 FPSTMG 89


>sp|SYH_HALMA|HISTIDINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 TLGNLTG 10
TLG+LTG
Sbjct: 227 TLGDLTG 233


>sp|CSA3_METJA|CRISPR locus-related putative DNA-binding protein|Methanocaldococcus

Query: 2 PSTLGNLTG 10
P T+ NLTG
Sbjct: 95 PKTIINLTG 103


>sp|RS3A_HALLT|SMALL ribosomal subunit protein eS1|Halorubrum lacusprofundi (strain

Query: 3 STLGNLTG 10
+TLG LTG
Sbjct: 47 TTLGELTG 54


>sp|DPOL_PYRAY|DNA polymerase 1|Pyrococcus abyssi

Query: 2 PSTLGNL 8
PS LGNL
Sbjct: 451 PSLLGNL 457


>sp|DPOL_PYRAB|DNA polymerase 1|Pyrococcus abyssi (strain GE5 /

Query: 2 PSTLGNL 8
PS LGNL
Sbjct: 451 PSLLGNL 457


>sp|COOS1_METMA|CARBON monoxide dehydrogenase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 LGNLTG 10
LGNLTG
Sbjct: 345 LGNLTG 350


>sp|AQPM_ARCFU|PROBABLE aquaporin AqpM|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 STLGNLTG 10
+T+GN+TG
Sbjct: 189 TTIGNITG 196


>sp|AQPM_METTH|AQUAPORIN AqpM|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 STLGNLTG 10
+T+GN+TG
Sbjct: 188 TTIGNITG 195




309|SequenceR|1550|1541|DMAPKFPSTL

>sp|RPO3_METKA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanopyrus kandleri (strain AV19 /

Query: 1 DMAPKFPSTL 10
D+ P FP TL
Sbjct: 122 DVEPAFPDTL 131


>sp|GUAAB_METBU|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcoides

Query: 1 DMAPKFPSTL 10
D++PK P+T+
Sbjct: 292 DLSPKPPATI 301


>sp|GUAAB_ARCFU|GMP synthase [glutamine-hydrolyzing] subunit B|Archaeoglobus fulgidus

Query: 1 DMAPKFPSTL 10
D+ PK P+T+
Sbjct: 291 DITPKPPATI 300


>sp|GUAAB_METB6|GMP synthase [glutamine-hydrolyzing] subunit B|Methanoregula boonei

Query: 1 DMAPKFPSTL 10
D+ PK P+T+
Sbjct: 293 DITPKPPATI 302


>sp|GUAAB_METAC|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina

Query: 1 DMAPKFPSTL 10
D+ PK P+T+
Sbjct: 293 DITPKPPATI 302


>sp|GUAAB_METPE|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosphaerula

Query: 1 DMAPKFPSTL 10
D+ PK P+T+
Sbjct: 293 DVTPKPPATI 302


>sp|GUAAB_METMA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina mazei

Query: 1 DMAPKFPSTL 10
D+ PK P+T+
Sbjct: 293 DITPKPPATI 302


>sp|GUAAB_METBF|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina barkeri

Query: 1 DMAPKFPSTL 10
D+ PK P+T+
Sbjct: 293 DITPKPPATI 302


>sp|GUAAB_METAR|GMP synthase [glutamine-hydrolyzing] subunit B|Methanocella arvoryzae

Query: 1 DMAPKFPSTL 10
D+ PK P+T+
Sbjct: 293 DITPKPPATI 302


>sp|GUAAB_METMJ|GMP synthase [glutamine-hydrolyzing] subunit B|Methanoculleus

Query: 1 DMAPKFPSTL 10
D+ PK P+T+
Sbjct: 293 DVTPKPPATI 302


>sp|GUAAB_METKA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanopyrus kandleri

Query: 1 DMAPKFPSTL 10
D+ PK P+T+
Sbjct: 302 DITPKPPATI 311




310|SequenceR|1555|1546|YYYNTDMAPK

>sp|RAD50_SULTO|DNA double-strand break repair Rad50|Sulfurisphaera tokodaii (strain

Query: 2 YYNTDMAPK 10
YYNTD+ K
Sbjct: 591 YYNTDLTQK 599


>sp|TRM56_SULTO|TRNA (cytidine(56)-2'-O)-methyltransferase|Sulfurisphaera tokodaii

Query: 1 YYYNTD 6
YYYN+D
Sbjct: 111 YYYNSD 116


>sp|IDI2_THEAC|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 YYNTDMAP 9
YY +D+AP
Sbjct: 256 YYCSDLAP 263


>sp|HAC8_HALAS|PRE-PROTEIN-C8 sp. (strain AS7092)

Query: 1 YYYNTD 6
YYY TD
Sbjct: 139 YYYETD 144


>sp|PUR1_METJA|AMIDOPHOSPHORIBOSYLTRANSFERASE jannaschii (strain ATCC 43067

Query: 2 YYNTDMAPK 10
YY DMA K
Sbjct: 402 YYGIDMATK 410


>sp|SURE_PYRAR|5'-NUCLEOTIDASE SurE|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 YYYNTDMAPK 10
+ Y TD+AP+
Sbjct: 209 WLYGTDLAPE 218


>sp|Y900_METJA|UNCHARACTERIZED protein MJ0900|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YNTDMAPK 10
Y+TD++PK
Sbjct: 251 YSTDVSPK 258


>sp|NEP1_SULTO|RIBOSOMAL RNA small subunit methyltransferase|Sulfurisphaera tokodaii (strain

Query: 2 YYNTDMAP 9
Y N+DM P
Sbjct: 94 YVNSDMRP 101


>sp|RS7_SULAC|SMALL ribosomal subunit protein uS7|Sulfolobus acidocaldarius (strain

Query: 1 YYYNTDMAPK 10
YY D+AP+
Sbjct: 126 YYVAVDVAPQ 135


>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YYYNTDMAP 9
+YY+ DM P
Sbjct: 90 FYYDFDMKP 98


>sp|RS7_SULTO|SMALL ribosomal subunit protein uS7|Sulfurisphaera tokodaii (strain DSM

Query: 1 YYYNTDMAPK 10
YY D+AP+
Sbjct: 125 YYVAVDVAPQ 134


>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YYYNTDMAP 9
+YY+ DM P
Sbjct: 90 FYYDFDMKP 98


>sp|CAS1_THEKO|CRISPR-ASSOCIATED endonuclease Cas1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 YNTDMAP 9
YNT +AP
Sbjct: 206 YNTQLAP 212


>sp|TRM56_SULAC|TRNA (cytidine(56)-2'-O)-methyltransferase|Sulfolobus acidocaldarius

Query: 1 YYYNTD 6
YYYN+D
Sbjct: 73 YYYNSD 78


>sp|Y485_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YYYNTDMAP 9
YY + DM P
Sbjct: 277 YYKDKDMCP 285


>sp|DMSB_HALSA|PUTATIVE dimethyl sulfoxide reductase iron-sulfur|Halobacterium salinarum

Query: 1 YYYNTDMAP 9
YY N +M+P
Sbjct: 206 YYINGEMSP 214


>sp|YPZ5_METTF|UNCHARACTERIZED protein ORF5'|Methanothermobacter thermautotrophicus

Query: 1 YYYNTDMAPK 10
Y YNT+ P+
Sbjct: 443 YTYNTNYRPR 452


>sp|RL22_IGNH4|LARGE ribosomal subunit protein uL22|Ignicoccus hospitalis (strain

Query: 1 YYYNTDMAPK 10
++Y+TD+A K
Sbjct: 4 WHYSTDIAEK 13




311|SequenceR|1560|1551|REVASYYYNT

>sp|DHYS_PYRHO|PROBABLE deoxyhypusine synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EVASYYY 8
EV SYYY
Sbjct: 32 EVVSYYY 38


>sp|MOAA_METJA|PROBABLE GTP 3',8-cyclase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EVASYYYN 9
E+ YYYN
Sbjct: 190 ELKGYYYN 197


>sp|RS15_METS3|SMALL ribosomal subunit protein uS15|Methanobrevibacter smithii (strain

Query: 1 REVASYYYN 9
R +ASYY N
Sbjct: 104 RRLASYYVN 112


>sp|UBIX_ARCFU|FLAVIN prenyltransferase UbiX|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 REVASYYYN 9
RE+A+ YY+
Sbjct: 54 REIATKYYD 62


>sp|RPO3_PYRCJ|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum calidifontis (strain DSM

Query: 3 VASYYY 8
+ASYYY
Sbjct: 158 LASYYY 163




312|SequenceR|1565|1556|RMLNNREVAS

>sp|PURL_IGNH4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 MLNNREVAS 10
+LN +EVAS
Sbjct: 688 LLNGKEVAS 696


>sp|PYRH_STAMF|URIDYLATE kinase|Staphylothermus marinus (strain ATCC 43588

Query: 1 RMLNNREVA 9
R++NN E+A
Sbjct: 101 RIMNNYEIA 109




313|SequenceR|1570|1561|ISQSLRMLNN

>sp|PYRB_SACS2|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus solfataricus

Query: 1 ISQSLRMLNN 10
++ ++RMLNN
Sbjct: 84 LADTIRMLNN 93


>sp|HUTU_HALSA|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 4 SLRMLNN 10
+LRMLNN
Sbjct: 39 ALRMLNN 45


>sp|HUTU_HALS3|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 29341

Query: 4 SLRMLNN 10
+LRMLNN
Sbjct: 39 ALRMLNN 45


>sp|PYRB_SULTO|ASPARTATE carbamoyltransferase catalytic subunit|Sulfurisphaera tokodaii

Query: 1 ISQSLRMLNN 10
++ ++RMLNN
Sbjct: 83 LADTIRMLNN 92


>sp|PYRB_SACI7|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 1 ISQSLRMLNN 10
++ ++RMLNN
Sbjct: 84 LADTIRMLNN 93


>sp|PYRB_SACI2|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 1 ISQSLRMLNN 10
++ ++RMLNN
Sbjct: 84 LADTIRMLNN 93


>sp|PYRB_SACI1|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 1 ISQSLRMLNN 10
++ ++RMLNN
Sbjct: 84 LADTIRMLNN 93


>sp|PYRB_SACI3|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 1 ISQSLRMLNN 10
++ ++RMLNN
Sbjct: 84 LADTIRMLNN 93


>sp|PYRB_SACI6|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 1 ISQSLRMLNN 10
++ ++RMLNN
Sbjct: 84 LADTIRMLNN 93


>sp|PYRB_SACI4|ASPARTATE carbamoyltransferase catalytic subunit|Saccharolobus islandicus

Query: 1 ISQSLRMLNN 10
++ ++RMLNN
Sbjct: 84 LADTIRMLNN 93


>sp|Y875_METJA|UNCHARACTERIZED protein MJ0875|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SQSLRMLNN 10
+QSLR+L N
Sbjct: 608 AQSLRLLKN 616


>sp|PYRB_SULAC|ASPARTATE carbamoyltransferase catalytic subunit|Sulfolobus acidocaldarius

Query: 1 ISQSLRMLNN 10
++ ++RMLNN
Sbjct: 84 LADTIRMLNN 93




314|SequenceR|1575|1566|VPTFPISQSL

>sp|MAP2_PYRAB|METHIONINE aminopeptidase|Pyrococcus abyssi (strain GE5 /

Query: 2 PTFPISQSL 10
P FP++ SL
Sbjct: 48 PAFPVNLSL 56


>sp|FLAK_METM6|PREFLAGELLIN peptidase|Methanococcus maripaludis (strain C6 /

Query: 1 VPTFPI 6
VPTFPI
Sbjct: 110 VPTFPI 115




315|SequenceR|1580|1571|EGRPPVPTFP

>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 2 GRPPVPTFP 10
G+PPVP P
Sbjct: 166 GKPPVPKSP 174


>sp|MTMB2_METAC|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina acetivorans (strain ATCC

Query: 2 GRPPVPTFP 10
G+PPVP P
Sbjct: 166 GKPPVPKSP 174


>sp|Y1243_METJA|UPF0251 protein MJ1243|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GRPPVPTF 9
GRP +P F
Sbjct: 5 GRPKIPRF 12


>sp|APGM_THEVO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EGRPPVPTFP 10
EG+PP P P
Sbjct: 169 EGKPPEPIRP 178


>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 1 EGRPPVP 7
EGR PVP
Sbjct: 442 EGRWPVP 448


>sp|UBIX_METJA|FLAVIN prenyltransferase UbiX|Methanocaldococcus jannaschii (strain ATCC

Query: 4 PPVPTF 9
PP+P F
Sbjct: 144 PPIPAF 149


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GRPPVP 7
G PPVP
Sbjct: 52 GNPPVP 57


>sp|CBIF_METJA|COBALT-PRECORRIN-4 C(11)-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EGRPPVP 7
EGR P+P
Sbjct: 143 EGRTPMP 149


>sp|AAT_SULTO|ASPARTATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GRPPVPTF 9
G+P +PTF
Sbjct: 42 GQPDLPTF 49


>sp|AAT_SACS2|ASPARTATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GRPPVPTF 9
G+P +PTF
Sbjct: 43 GQPDLPTF 50


>sp|SYS_METLZ|SERINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 EGRPPVPTF 9
EG+ P P F
Sbjct: 67 EGKDPAPLF 75


>sp|NADE_STAMF|NH(3)-DEPENDENT NAD(+) synthetase|Staphylothermus marinus (strain ATCC 43588

Query: 4 PPVPTFP 10
PP+P+ P
Sbjct: 260 PPIPSLP 266


>sp|AAT_SULAC|ASPARTATE aminotransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GRPPVPTF 9
G+P PTF
Sbjct: 42 GQPDFPTF 49


>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GRPPVP 7
GRPP P
Sbjct: 36 GRPPSP 41


>sp|PYCB_METTH|PYRUVATE carboxylase subunit B|Methanothermobacter thermautotrophicus

Query: 2 GRPPVP 7
GRPP P
Sbjct: 375 GRPPAP 380


>sp|SPEE_METJA|POLYAMINE aminopropyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 5 PVPTFP 10
P+PT+P
Sbjct: 228 PMPTYP 233


>sp|PYCB_METJA|PYRUVATE carboxylase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GRPPVPTFP 10
G+PP P P
Sbjct: 373 GKPPAPINP 381


>sp|RRP41_PYRIL|EXOSOME complex component Rrp41|Pyrobaculum islandicum (strain DSM 4184

Query: 3 RPPVPTF 9
+PPVP F
Sbjct: 3 KPPVPLF 9


>sp|RS19_METTH|SMALL ribosomal subunit protein uS19|Methanothermobacter

Query: 1 EGRPPV 6
EGRPPV
Sbjct: 61 EGRPPV 66


>sp|HIS81_ARCFU|HISTIDINOL-PHOSPHATE aminotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 PVPTFP 10
P+PTFP
Sbjct: 80 PIPTFP 85




316|SequenceR|1585|1576|YVTVPEGRPP

>sp|APGM_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina acetivorans (strain ATCC

Query: 3 TVPEGRPP 10
TVPEG PP
Sbjct: 47 TVPEGFPP 54


>sp|CBIF_METJA|COBALT-PRECORRIN-4 C(11)-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VTVPEGRPP 10
+T PEGR P
Sbjct: 139 ITRPEGRTP 147


>sp|Y1450_METJA|UNCHARACTERIZED protein MJ1450|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YVTVPEGRPP 10
Y T+P G P
Sbjct: 313 YTTIPRGSHP 322


>sp|CBID_METS3|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 2 VTVPEGR 8
+++PEGR
Sbjct: 146 ISIPEGR 152


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 YVTVPEGR 8
YVT P+GR
Sbjct: 449 YVTRPDGR 456


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 YVTVPEGR 8
YVT P+GR
Sbjct: 449 YVTRPDGR 456


>sp|SYR_NATPD|ARGININE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 YVTVPEGR 8
YV +PEG+
Sbjct: 371 YVNLPEGK 378


>sp|SYE_PYRAB|GLUTAMATE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 VPEGRP 9
VPEGRP
Sbjct: 511 VPEGRP 516


>sp|EF2_THEON|ELONGATION factor 2|Thermococcus onnurineus (strain NA1)

Query: 4 VPEGRP 9
+PEGRP
Sbjct: 507 IPEGRP 512


>sp|EF2_THEKO|ELONGATION factor 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 VPEGRP 9
+PEGRP
Sbjct: 507 IPEGRP 512


>sp|EF2_THESM|ELONGATION factor 2|Thermococcus sibiricus (strain DSM 12597

Query: 4 VPEGRP 9
+PEGRP
Sbjct: 507 IPEGRP 512


>sp|EF2_THEGJ|ELONGATION factor 2|Thermococcus gammatolerans (strain DSM 15229

Query: 4 VPEGRP 9
+PEGRP
Sbjct: 507 IPEGRP 512


>sp|CAH_METTT|CARBONIC anhydrase|Methanosarcina thermophila (strain ATCC 43570

Query: 2 VTVPEGR 8
VT+P+GR
Sbjct: 193 VTIPDGR 199


>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 YVTVPEGRPP 10
Y VP+ PP
Sbjct: 619 YDKVPDSNPP 628


>sp|UPP_HALLT|URACIL phosphoribosyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 1 YVTVPEGRP 9
YV +PE RP
Sbjct: 129 YVKLPEIRP 137


>sp|VORA_METTH|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter thermautotrophicus

Query: 2 VTVPEGRPP 10
VT P GR P
Sbjct: 154 VTCPTGRDP 162


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 YVTVPEG 7
++T+PEG
Sbjct: 361 FITLPEG 367




317|SequenceR|1590|1581|SEELRYVTVP

>sp|GGGPS_SACS2|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SEELRYVT 8
S+EL+Y+T
Sbjct: 41 SDELKYIT 48


>sp|MCRC_METVA|METHYL-COENZYME M reductase operon protein|Methanococcus vannielii

Query: 4 LRYVTVP 10
L+YVT+P
Sbjct: 127 LKYVTIP 133


>sp|KAE1B_METMJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 SEELRYVTVP 10
E L+YVT P
Sbjct: 413 GEVLKYVTAP 422


>sp|GGGPS_SACI7|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 SEELRYV 7
SEEL+Y+
Sbjct: 41 SEELKYI 47


>sp|GGGPS_SACI3|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.16.27)

Query: 1 SEELRYV 7
SEEL+Y+
Sbjct: 41 SEELKYI 47


>sp|GGGPS_SACI2|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 SEELRYV 7
SEEL+Y+
Sbjct: 41 SEELKYI 47


>sp|GGGPS_SACI1|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 SEELRYV 7
SEEL+Y+
Sbjct: 41 SEELKYI 47


>sp|GGGPS_SACI6|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 SEELRYV 7
SEEL+Y+
Sbjct: 41 SEELKYI 47


>sp|GGGPS_SACI4|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 SEELRYV 7
SEEL+Y+
Sbjct: 41 SEELKYI 47


>sp|Y525_METKA|UNCHARACTERIZED protein MK0525|Methanopyrus kandleri (strain AV19 /

Query: 1 SEELRYV 7
SEELR+V
Sbjct: 165 SEELRFV 171


>sp|FBPAP_THEKO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 EELRYVTVP 10
EE+ Y T+P
Sbjct: 353 EEMEYTTLP 361




318|SequenceR|1595|1586|LINPSSEELR

>sp|GGR_METVS|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus vannielii (strain ATCC 35089

Query: 2 INPSSEELR 10
INPSSE +R
Sbjct: 60 INPSSEFIR 68


>sp|Y1233_METJA|UNCHARACTERIZED protein MJ1233|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 INPSSEEL 9
INP SEEL
Sbjct: 174 INPYSEEL 181


>sp|CUTC_SULAC|GLYCERALDEHYDE dehydrogenase small chain|Sulfolobus acidocaldarius (strain ATCC

Query: 3 NPSSEELR 10
NP+ EE+R
Sbjct: 127 NPTEEEVR 134


>sp|MTRC_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanosarcina barkeri (strain Fusaro

Query: 4 PSSEELR 10
PSSEEL+
Sbjct: 261 PSSEELQ 267


>sp|PRIS_METB6|DNA primase small subunit PriS|Methanoregula boonei (strain DSM 21154

Query: 1 LINPSSEELR 10
L NP + ELR
Sbjct: 37 LFNPGAAELR 46


>sp|ARGC_METAC|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 NPSSEELR 10
NP SEE+R
Sbjct: 58 NPVSEEIR 65


>sp|ARGC_METBF|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina barkeri (strain Fusaro /

Query: 3 NPSSEELR 10
NP SE++R
Sbjct: 59 NPDSEDIR 66


>sp|SYT_METJA|THREONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LINPSSEEL 9
L+NP +EE+
Sbjct: 153 LLNPETEEI 161


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LINPSSEELR 10
L+NP +E+L+
Sbjct: 659 LVNPIAEQLK 668


>sp|CDC45_SULAC|CELL division control protein 45|Sulfolobus acidocaldarius (strain

Query: 4 PSSEELR 10
PS EELR
Sbjct: 8 PSKEELR 14


>sp|PRIL_METTH|DNA primase large subunit PriL|Methanothermobacter thermautotrophicus

Query: 1 LINPSSEELR 10
INP SE+ R
Sbjct: 6 FINPFSEDAR 15


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 1 LINPSSEEL 9
L+NP EE+
Sbjct: 672 LVNPRDEEV 680


>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 INPSSEE 8
+NPSSE+
Sbjct: 507 VNPSSEQ 513


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LINPSSEE 8
+INP++EE
Sbjct: 341 VINPATEE 348


>sp|NUCS_PYRAB|ENDONUCLEASE NucS|Pyrococcus abyssi (strain GE5 /

Query: 3 NPSSEELR 10
NPS EE++
Sbjct: 9 NPSEEEIK 16




319|SequenceR|1600|1591|SMSNNLINPS

>sp|Y1039_PYRHO|UNCHARACTERIZED ABC transporter extracellular-binding protein|Pyrococcus horikoshii

Query: 4 NNLINP 9
NN+INP
Sbjct: 127 NNIINP 132


>sp|AMPPA_METLZ|AMP phosphorylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 MSNNLINPS 10
MS+N+++PS
Sbjct: 113 MSSNVLSPS 121




320|SequenceR|1605|1596|LQSWSSMSNN

>sp|SYK_HALMA|LYSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 QSWSSMSNN 10
Q W+S++NN
Sbjct: 442 QEWASLTNN 450




321|SequenceR|1610|1601|KACLGLQSWS

>sp|Y064_ARCFU|UNCHARACTERIZED protein AF_0064|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CLGLQSWS 10
C+G SWS
Sbjct: 59 CVGTDSWS 66


>sp|Y2433_ARCFU|PUTATIVE RNase AF_2433|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KACLGLQSW 9
K C GL++W
Sbjct: 84 KKCNGLRNW 92


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 1 KACLGLQSWS 10
K CLGL+ S
Sbjct: 340 KMCLGLEDVS 349


>sp|HYD1D_PYRFU|SULFHYDROGENASE 1 subunit delta|Pyrococcus furiosus (strain ATCC 43587

Query: 5 GLQSWS 10
G+QSWS
Sbjct: 91 GVQSWS 96




322|SequenceR|1615|1606|SLFEIKACLG

>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FEIKAC 8
FE+KAC
Sbjct: 660 FEVKAC 665


>sp|Y011_PYRAR|PROTEIN Pars_0011|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 FEIKACLG 10
FE++ C+G
Sbjct: 59 FELRGCIG 66


>sp|UVRC_METTH|UVRABC system protein C|Methanothermobacter thermautotrophicus (strain

Query: 1 SLFEIKAC 8
SLF I++C
Sbjct: 142 SLFRIRSC 149




323|SequenceR|1620|1611|GMEEKSLFEI

>sp|AATA_SULTO|A-TYPE ATP synthase subunit A|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GMEEKSLFEI 10
GM E +FE+
Sbjct: 19 GMREAQMFEV 28


>sp|KUP_METHJ|PROBABLE potassium transport system protein|Methanospirillum hungatei JF-1

Query: 1 GMEEKSLF 8
G+EEK++F
Sbjct: 558 GIEEKTIF 565


>sp|NEP1_THEON|RIBOSOMAL RNA small subunit methyltransferase|Thermococcus onnurineus (strain

Query: 2 MEEKSLFEI 10
MEEKSL E+
Sbjct: 131 MEEKSLAEL 139


>sp|HCP_METAR|HYDROXYLAMINE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GMEEKSLFE 9
G E+K +FE
Sbjct: 168 GQEDKKVFE 176


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 1 GMEEKSLFEI 10
G+EEKS+ +I
Sbjct: 973 GIEEKSINDI 982




324|SequenceR|1625|1616|RRLGGGMEEK

>sp|AATA_SULAC|A-TYPE ATP synthase subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RRLGGGMEE 9
R LGG MEE
Sbjct: 341 RELGGRMEE 349


>sp|AATA_SULTO|A-TYPE ATP synthase subunit A|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RRLGGGMEE 9
R LGG MEE
Sbjct: 341 RDLGGRMEE 349


>sp|AATA_SACS2|A-TYPE ATP synthase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 1 RRLGGGMEE 9
R LGG MEE
Sbjct: 340 RDLGGRMEE 348


>sp|AATA_SACI6|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.4 /

Query: 1 RRLGGGMEE 9
R LGG MEE
Sbjct: 340 RDLGGRMEE 348


>sp|AATA_SACI4|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.14.25 /

Query: 1 RRLGGGMEE 9
R LGG MEE
Sbjct: 340 RDLGGRMEE 348


>sp|AATA_SACI3|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.27)

Query: 1 RRLGGGMEE 9
R LGG MEE
Sbjct: 340 RDLGGRMEE 348


>sp|AATA_SACI2|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 RRLGGGMEE 9
R LGG MEE
Sbjct: 340 RDLGGRMEE 348


>sp|AATA_SACI1|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 RRLGGGMEE 9
R LGG MEE
Sbjct: 340 RDLGGRMEE 348


>sp|AATA_SACI7|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 RRLGGGMEE 9
R LGG MEE
Sbjct: 340 RDLGGRMEE 348


>sp|LHRC_METJA|ATP-DEPENDENT helicase Lhr-Core|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LGGGMEEK 10
L GG+EEK
Sbjct: 461 LAGGIEEK 468


>sp|FDHD_METTH|SULFUR carrier protein FdhD|Methanothermobacter thermautotrophicus

Query: 2 RLGGGMEEK 10
R+ GGME++
Sbjct: 32 RINGGMEQR 40


>sp|AATA_METS5|A-TYPE ATP synthase subunit A|Metallosphaera sedula (strain ATCC 51363

Query: 1 RRLGGGMEE 9
R LGG MEE
Sbjct: 340 RDLGGRMEE 348


>sp|RADA_IGNH4|DNA repair and recombination protein|Ignicoccus hospitalis (strain

Query: 3 LGGGMEEK 10
LGGG+E K
Sbjct: 99 LGGGIETK 106


>sp|RADA_AERPX|DNA repair and recombination protein|Aeropyrum pernix

Query: 3 LGGGMEEK 10
LGGG+E K
Sbjct: 97 LGGGIETK 104


>sp|RADA_AERPE|DNA repair and recombination protein|Aeropyrum pernix (strain ATCC

Query: 3 LGGGMEEK 10
LGGG+E K
Sbjct: 97 LGGGIETK 104


>sp|RADA_METJA|DNA repair and recombination protein|Methanocaldococcus jannaschii

Query: 3 LGGGMEEK 10
LGGG+E +
Sbjct: 122 LGGGLESQ 129




325|SequenceR|1630|1621|QVKVARRLGG

>sp|ASSY_PYRAE|ARGININOSUCCINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VKVARRLGG 10
V+VARRLG
Sbjct: 103 VEVARRLGA 111


>sp|HMGCS_AERPE|HYDROXYMETHYLGLUTARYL-COA synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 VKVARRLG 9
VKVA++LG
Sbjct: 255 VKVAKKLG 262


>sp|HMGCS_METST|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 VKVARRLG 9
++VAR+LG
Sbjct: 242 IRVARKLG 249


>sp|Y863_METTH|UNCHARACTERIZED protein MTH_863|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 KVARRLGG 10
+VAR++GG
Sbjct: 197 RVARKVGG 204




326|SequenceR|1635|1626|ESWTCQVKVA

>sp|SPH2_HALSA|SMC-LIKE protein Sph2|Halobacterium salinarum (strain ATCC 700922

Query: 1 ESWTCQVKV 9
E WTC +V
Sbjct: 340 ECWTCGTEV 348


>sp|SPH2_HALS3|SMC-LIKE protein Sph2|Halobacterium salinarum (strain ATCC 29341

Query: 1 ESWTCQVKV 9
E WTC +V
Sbjct: 340 ECWTCGTEV 348


>sp|Y1463_THESM|UPF0127 protein TSIB_1463|Thermococcus sibiricus (strain DSM 12597

Query: 3 WTCQVKVA 10
WT +VK+A
Sbjct: 11 WTGRVKIA 18


>sp|KTHY_METTH|PROBABLE thymidylate kinase|Methanothermobacter thermautotrophicus (strain

Query: 1 ESWTCQV 7
E W C++
Sbjct: 104 EEWVCEI 110


>sp|ENO_PICTO|ENOLASE torridus (strain ATCC 700027

Query: 1 ESWTCQV 7
++WTC +
Sbjct: 198 KAWTCDI 204




327|SequenceR|1640|1631|KLIDHESWTC

>sp|SYR_THEKO|ARGININE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 DHESWT 9
DHE+WT
Sbjct: 369 DHETWT 374


>sp|SYR_THESM|ARGININE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 KLIDHESWT 9
K+ DH++WT
Sbjct: 368 KINDHKTWT 376


>sp|GCH3_SACI6|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KLIDHESWT 9
KL+D+ WT
Sbjct: 7 KLVDYREWT 15


>sp|GCH3_SACI4|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KLIDHESWT 9
KL+D+ WT
Sbjct: 7 KLVDYREWT 15


>sp|GCH3_SACI3|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.16.27)

Query: 1 KLIDHESWT 9
KL+D+ WT
Sbjct: 7 KLVDYREWT 15


>sp|GCH3_SACI2|GTP cyclohydrolase III|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 KLIDHESWT 9
KL+D+ WT
Sbjct: 7 KLVDYREWT 15


>sp|GCH3_SACI1|GTP cyclohydrolase III|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 KLIDHESWT 9
KL+D+ WT
Sbjct: 7 KLVDYREWT 15


>sp|GCH3_SACI7|GTP cyclohydrolase III|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 KLIDHESWT 9
KL+D+ WT
Sbjct: 7 KLVDYREWT 15


>sp|NADM_HALMA|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 KLIDHESW 8
++ID ESW
Sbjct: 132 RMIDDESW 139


>sp|GCH3_SACS2|GTP cyclohydrolase III|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KLIDHESWT 9
KL+D+ WT
Sbjct: 7 KLLDYREWT 15


>sp|Y1182_METJA|UNCHARACTERIZED protein MJ1182|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DHESWT 9
DHE WT
Sbjct: 225 DHELWT 230


>sp|CCA_THEGJ|CCA-ADDING enzyme|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KLIDHESW 8
K+ID E+W
Sbjct: 208 KIIDPENW 215


>sp|CCA_PYRAB|CCA-ADDING enzyme|Pyrococcus abyssi (strain GE5 /

Query: 1 KLIDHESW 8
K+ID E+W
Sbjct: 207 KIIDPENW 214


>sp|GCH3_SULTO|GTP cyclohydrolase III|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LIDHESWT 9
L+D++ WT
Sbjct: 8 LVDYKEWT 15


>sp|DPS_PYRFU|DNA protection during starvation protein|Pyrococcus furiosus (strain

Query: 3 IDHESW 8
I+HE+W
Sbjct: 149 IEHEAW 154


>sp|GLYA_THEKO|SERINE hydroxymethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 4 DHESW 8
DHE+W
Sbjct: 18 DHENW 22


>sp|IF2P_METMP|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 4 DHESWT 9
+HE WT
Sbjct: 444 EHEEWT 449


>sp|CCA_PYRHO|CCA-ADDING enzyme|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KLIDHESW 8
K+ID E W
Sbjct: 208 KIIDPEDW 215


>sp|RRP4_AERPE|EXOSOME complex component Rrp4|Aeropyrum pernix (strain ATCC 700893

Query: 1 KLIDHESWT 9
K+ID E++T
Sbjct: 207 KIIDEEAYT 215


>sp|DPS_SACS2|DNA protection during starvation protein|Saccharolobus solfataricus

Query: 3 IDHESW 8
I+HE+W
Sbjct: 157 IEHEAW 162




328|SequenceR|1645|1636|YLHGSKLIDH

>sp|G1PDH_IGNH4|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 YLHGSKL 7
YLHGSKL
Sbjct: 280 YLHGSKL 286


>sp|SYG_THESM|GLYCINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 LHGSKLIDH 10
+HG KL+ H
Sbjct: 428 VHGEKLVPH 436


>sp|COFC_HALVD|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloferax volcanii (strain ATCC 29605

Query: 3 HGSKLIDH 10
HG+ ++DH
Sbjct: 134 HGASILDH 141


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 HGSKLIDH 10
HG L+DH
Sbjct: 119 HGRHLLDH 126


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 HGSKLIDH 10
HG L+DH
Sbjct: 119 HGRHLLDH 126


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 3 HGSKLIDH 10
HG L+DH
Sbjct: 120 HGRHLLDH 127


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 HGSKLIDH 10
HG L+DH
Sbjct: 119 HGRHLLDH 126


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 HGSKLIDH 10
HG L+DH
Sbjct: 120 HGRHLLDH 127


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 3 HGSKLIDH 10
HG L+DH
Sbjct: 120 HGRHLLDH 127


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 3 HGSKLIDH 10
HG L+DH
Sbjct: 120 HGRHLLDH 127


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 HGSKLIDH 10
HG L+DH
Sbjct: 120 HGRHLLDH 127


>sp|MUTL_METLZ|DNA mismatch repair protein MutL|Methanocorpusculum labreanum (strain

Query: 2 LHGSKLIDH 10
+HG +LI H
Sbjct: 130 IHGGELISH 138


>sp|DNLI2_METBF|DNA ligase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 YLHGSKLID 9
YL+G LID
Sbjct: 350 YLNGKTLID 358


>sp|PCNA_METST|DNA polymerase sliding clamp|Methanosphaera stadtmanae (strain ATCC

Query: 1 YLHGSKL 7
YLHG K+
Sbjct: 177 YLHGEKI 183


>sp|DNLI2_METAC|DNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YLHGSKLID 9
YL+G LID
Sbjct: 350 YLNGRTLID 358


>sp|NIFH1_METBA|NITROGENASE iron protein 1|Methanosarcina barkeri

Query: 1 YLHGSKLIDH 10
Y HG K+ H
Sbjct: 28 YYHGKKIFIH 37


>sp|ATGT_METVS|TRNA-GUANINE(15) transglycosylase|Methanococcus vannielii (strain ATCC 35089

Query: 1 YLHGSKLIDH 10
Y +G+K+ID+
Sbjct: 509 YQYGAKIIDN 518


>sp|PYRH_METS3|URIDYLATE kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 YLHGSKLID 9
Y+H KLI+
Sbjct: 129 YIHADKLIN 137


>sp|Y365_METJA|UNCHARACTERIZED protein MJ0365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YLHGSKLIDH 10
Y G+KL+D+
Sbjct: 104 YRKGTKLVDY 113


>sp|COFC_NATMM|2-PHOSPHO-L-LACTATE guanylyltransferase|Natrialba magadii (strain ATCC 43099

Query: 3 HGSKLIDH 10
HG+ +DH
Sbjct: 156 HGASYLDH 163


>sp|COFC_HALTV|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloterrigena turkmenica (strain ATCC 51198

Query: 3 HGSKLIDH 10
HG+ +DH
Sbjct: 153 HGASYLDH 160


>sp|COFC_HALLT|2-PHOSPHO-L-LACTATE guanylyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 HGSKLIDH 10
HG+ +DH
Sbjct: 142 HGASYLDH 149


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 YLHGSK 6
YLHG K
Sbjct: 16 YLHGGK 21




329|SequenceR|1650|1641|FSKIIYLHGS

>sp|LYSZ_SULAC|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 SKIIYLHG 9
+KIIY+HG
Sbjct: 27 NKIIYVHG 34


>sp|VHOG_METMA|F420 non-reducing hydrogenase I small|Methanosarcina mazei (strain

Query: 2 SKIIYLHGS 10
+K+I++HGS
Sbjct: 57 TKVIWIHGS 65


>sp|VHTG_METMA|F420 non-reducing hydrogenase II small|Methanosarcina mazei (strain

Query: 2 SKIIYLHGS 10
+K+I++HGS
Sbjct: 57 TKLIWIHGS 65


>sp|TIAS_HYPBU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Hyperthermus butylicus (strain

Query: 2 SKIIYLHGS 10
+K+I LHGS
Sbjct: 156 TKLIALHGS 164


>sp|Y662_METJA|UNCHARACTERIZED protein MJ0662|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FSKIIYLHG 9
F KIIYL+G
Sbjct: 62 FFKIIYLYG 70


>sp|G1PDH_IGNH4|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 IIYLHGS 10
++YLHGS
Sbjct: 278 MLYLHGS 284


>sp|Y179_ARCFU|UNCHARACTERIZED protein AF_0179|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FSKIIYLHGS 10
F+K +Y+H S
Sbjct: 135 FNKALYVHSS 144


>sp|TRPD_SACI6|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 FSKIIYLHG 9
F+K+I +HG
Sbjct: 210 FNKVILVHG 218


>sp|TRPD_SACI4|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain M.14.25

Query: 1 FSKIIYLHG 9
F+K+I +HG
Sbjct: 210 FNKVILVHG 218


>sp|TRPD_SACI7|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 1 FSKIIYLHG 9
F+K+I +HG
Sbjct: 210 FNKVILVHG 218


>sp|TRPD_SACI2|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 FSKIIYLHG 9
F+K+I +HG
Sbjct: 210 FNKVILVHG 218


>sp|TRPD_SACI3|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 FSKIIYLHG 9
F+K+I +HG
Sbjct: 210 FNKVILVHG 218


>sp|TRPD_SACI1|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 1 FSKIIYLHG 9
F+K+I +HG
Sbjct: 210 FNKVILVHG 218


>sp|METX_METTH|PROBABLE acyltransferase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 SKIIYLHG 9
S ++YLHG
Sbjct: 198 SMLMYLHG 205


Query: 4 IIYLHG 9
+IY+HG
Sbjct: 48 VIYIHG 53




330|SequenceR|1655|1646|VVEPLFSKII

>sp|PYRH_METM7|URIDYLATE kinase|Methanococcus maripaludis (strain C7 /

Query: 1 VVEPLFSKII 10
VV+PL SKII
Sbjct: 184 VVDPLASKII 193


>sp|T1SH_METJA|TYPE I restriction enzyme MjaIX|Methanocaldococcus jannaschii (strain

Query: 1 VVEPLFSKII 10
+V+PLF KII
Sbjct: 393 LVQPLFEKII 402


>sp|PYRH_METMP|URIDYLATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VVEPLFSKII 10
VV+PL SKII
Sbjct: 184 VVDPLASKII 193


>sp|PYRH_METM6|URIDYLATE kinase|Methanococcus maripaludis (strain C6 /

Query: 1 VVEPLFSKII 10
VV+PL SKII
Sbjct: 184 VVDPLASKII 193


>sp|PYRH_METM5|URIDYLATE kinase|Methanococcus maripaludis (strain C5 /

Query: 1 VVEPLFSKII 10
VV+PL SKII
Sbjct: 184 VVDPLASKII 193


>sp|SYM_AERPE|METHIONINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 VEPLFSKI 9
VEPLF K+
Sbjct: 536 VEPLFQKL 543


>sp|SYM_METTH|METHIONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 EPLFSKI 9
+PLFSKI
Sbjct: 522 KPLFSKI 528


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 EPLFSKI 9
+PLFSKI
Sbjct: 540 KPLFSKI 546


>sp|RGYRA_METKA|REVERSE gyrase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 1 VVEPLFSKII 10
+VEP F+K++
Sbjct: 204 IVEPGFTKVL 213


>sp|PYRH_META3|URIDYLATE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VVEPLFSKII 10
+++PL SKII
Sbjct: 184 IIDPLASKII 193


>sp|RNP3_METM7|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C7 /

Query: 1 VVEPLFSKII 10
V +PL+SK I
Sbjct: 194 VTDPLYSKKI 203


>sp|RNP3_METMP|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain DSM 14266

Query: 1 VVEPLFSKII 10
V +PL+SK I
Sbjct: 194 VADPLYSKKI 203


>sp|PYRH_PYRHO|URIDYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VVEPLFSKII 10
V++PL +KII
Sbjct: 183 VIDPLAAKII 192


>sp|PYRH_PYRFU|URIDYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VVEPLFSKII 10
V++PL +KII
Sbjct: 183 VIDPLAAKII 192


>sp|SECF_THEGJ|PROTEIN-EXPORT membrane protein SecF|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VVEPLFSKI 9
VV+P F KI
Sbjct: 140 VVDPTFGKI 148


>sp|PYRH_METBU|URIDYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 2 VEPLFSKII 10
V+PL SKII
Sbjct: 183 VDPLASKII 191


>sp|NADM_PYRFU|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VVEPLFSKII 10
VV+P+F K I
Sbjct: 119 VVQPMFKKDI 128


>sp|IF2G_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain ATCC

Query: 3 EPLFSKI 9
EP+F+KI
Sbjct: 270 EPIFTKI 276


>sp|EF2_ARCFU|ELONGATION factor 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VVEPLFSKII 10
VVEPL K+I
Sbjct: 489 VVEPLPEKVI 498


>sp|NADM_PYRHO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VVEPLFSKII 10
VV+P+F K I
Sbjct: 117 VVQPMFKKDI 126




331|SequenceR|1660|1651|SSWTNVVEPL

>sp|BSUHB_METJA|FRUCTOSE-1,6-BISPHOSPHATASE/INOSITOL-1-MONOPHOSPHATASE jannaschii (strain ATCC 43067

Query: 1 SSWTNVVEPL 10
S WT V++P+
Sbjct: 74 SEWTVVIDPI 83


>sp|Y535_METJA|UNCHARACTERIZED protein MJ0535|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SWTNVVEPL 10
+W +VEP+
Sbjct: 228 AWNEIVEPI 236


>sp|CDC62_ARCFU|ORC1-TYPE DNA replication protein 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WTNVVEPL 10
W+N+ EPL
Sbjct: 136 WSNLDEPL 143


>sp|RL4_PYRAB|LARGE ribosomal subunit protein uL4|Pyrococcus abyssi (strain GE5 /

Query: 1 SSWTNVVEP 9
+SWT+ ++P
Sbjct: 37 ASWTHRIQP 45


>sp|DNLI1_HALWD|DNA ligase 1|Haloquadratum walsbyi (strain DSM 16790

Query: 2 SWTNVVEPL 10
++TN VEPL
Sbjct: 535 TFTNRVEPL 543


>sp|RL4_THESM|LARGE ribosomal subunit protein uL4|Thermococcus sibiricus (strain DSM

Query: 1 SSWTNVVEP 9
+SWT+ ++P
Sbjct: 37 ASWTHRIQP 45


>sp|RL4_PYRHO|LARGE ribosomal subunit protein uL4|Pyrococcus horikoshii (strain ATCC

Query: 1 SSWTNVVEP 9
+SWT+ ++P
Sbjct: 37 ASWTHRIQP 45


>sp|RL4_PYRFU|LARGE ribosomal subunit protein uL4|Pyrococcus furiosus (strain ATCC

Query: 1 SSWTNVVEP 9
+SWT+ ++P
Sbjct: 37 ASWTHRIQP 45


>sp|RL4_THEKO|LARGE ribosomal subunit protein uL4|Thermococcus kodakarensis (strain

Query: 1 SSWTNVVEP 9
+SWT+ ++P
Sbjct: 37 ASWTHRIQP 45


>sp|SYK_METJA|LYSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WTNVVEP 9
WTN+ P
Sbjct: 292 WTNIAHP 298


>sp|RL4_THEGJ|LARGE ribosomal subunit protein uL4|Thermococcus gammatolerans (strain

Query: 1 SSWTNVVEP 9
+SWT+ ++P
Sbjct: 37 ASWTHRIQP 45


>sp|RL4_THEON|LARGE ribosomal subunit protein uL4|Thermococcus onnurineus (strain

Query: 1 SSWTNVVEP 9
+SWT+ ++P
Sbjct: 37 ASWTHRIQP 45


>sp|SECY_HALMA|PROTEIN translocase subunit SecY|Haloarcula marismortui (strain ATCC

Query: 2 SWTNVVEPL 10
SW + EPL
Sbjct: 2 SWKDTAEPL 10


>sp|RL19E_METVA|LARGE ribosomal subunit protein eL19|Methanococcus vannielii

Query: 3 WTNVVEPL 10
W N + PL
Sbjct: 94 WMNTIRPL 101


>sp|Y1153_METTH|UNCHARACTERIZED protein MTH_1153|Methanothermobacter thermautotrophicus (strain

Query: 1 SSWTNV 6
S WTNV
Sbjct: 265 SKWTNV 270


>sp|PYRG_METTH|CTP synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 SSWTNVVEPL 10
S W +VE L
Sbjct: 279 SEWAGIVESL 288


>sp|Y401_METMA|UPF0228 protein MM_0401|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SWTNVVE 8
+WT+VVE
Sbjct: 88 NWTSVVE 94


>sp|Y4223_METAC|UPF0228 protein MA_4223|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 SWTNVVE 8
+WT+VVE
Sbjct: 88 NWTSVVE 94


>sp|Y393_METMA|UPF0228 protein MM_0393|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SWTNVVE 8
+WT+VVE
Sbjct: 88 NWTSVVE 94




332|SequenceR|1665|1656|DEKYISSWTN

>sp|SAHH_PYRAE|ADENOSYLHOMOCYSTEINASE aerophilum (strain ATCC 51768

Query: 3 KYISSW 8
+YISSW
Sbjct: 428 RYISSW 433


>sp|PELO_THEAC|PROTEIN pelota homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DEKYISSWT 9
DEKY++ +T
Sbjct: 126 DEKYVTVYT 134


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DEKYISSWTN 10
DE+ IS++TN
Sbjct: 94 DEEIISTFTN 103


>sp|HUTU_THEVO|PROBABLE urocanate hydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 EKYISSWTN 10
+KY+ +WT+
Sbjct: 206 DKYLDTWTD 214


>sp|CSG_METJA|S-LAYER protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DEKYISSW 8
DE+Y++ W
Sbjct: 358 DEEYVTDW 365


>sp|RL10E_THEON|LARGE ribosomal subunit protein uL16|Thermococcus onnurineus (strain NA1)

Query: 1 DEKYISSWTN 10
D+K ++ W N
Sbjct: 129 DQKILTVWVN 138


>sp|RL10E_THEKO|LARGE ribosomal subunit protein uL16|Thermococcus kodakarensis (strain

Query: 1 DEKYISSWTN 10
D+K ++ W N
Sbjct: 129 DQKILTVWVN 138


>sp|RL10E_THEGJ|LARGE ribosomal subunit protein uL16|Thermococcus gammatolerans (strain

Query: 1 DEKYISSWTN 10
D+K ++ W N
Sbjct: 129 DQKILTVWVN 138


>sp|SQRD_ACIAM|SULFIDE-QUINONE reductase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 EKYISSW 8
EK+++SW
Sbjct: 403 EKFLASW 409


>sp|HUTU_THEAC|PROBABLE urocanate hydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 EKYISSWT 9
+KY+ +WT
Sbjct: 206 DKYLDTWT 213


>sp|SAHH_THEVO|ADENOSYLHOMOCYSTEINASE volcanium (strain ATCC 51530

Query: 3 KYISSW 8
KY++SW
Sbjct: 401 KYLNSW 406


>sp|SAHH_THEAC|ADENOSYLHOMOCYSTEINASE acidophilum (strain ATCC 25905

Query: 3 KYISSW 8
KY++SW
Sbjct: 401 KYLNSW 406


>sp|OFOA1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 3 KYISSWT 9
KYI WT
Sbjct: 603 KYILKWT 609


>sp|SAHH_THEKO|ADENOSYLHOMOCYSTEINASE kodakarensis (strain ATCC BAA-918

Query: 2 EKYISSW 8
+KY+ SW
Sbjct: 411 KKYLESW 417


>sp|PNPH_SACS2|PURINE nucleoside phosphorylase|Saccharolobus solfataricus (strain ATCC

Query: 1 DEKYISSWTN 10
DE+++ W++
Sbjct: 164 DEEFVKKWSS 173


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 EKYISSWT 9
EKY+ WT
Sbjct: 318 EKYVLPWT 325


>sp|SAHH_PYRAB|ADENOSYLHOMOCYSTEINASE abyssi (strain GE5 /

Query: 2 EKYISSW 8
+KY+ SW
Sbjct: 412 KKYLESW 418


>sp|SAHH_PYRHO|ADENOSYLHOMOCYSTEINASE horikoshii (strain ATCC 700860

Query: 2 EKYISSW 8
+KY+ SW
Sbjct: 411 KKYLESW 417


>sp|SAHH_PYRFU|ADENOSYLHOMOCYSTEINASE furiosus (strain ATCC 43587

Query: 2 EKYISSW 8
+KY+ SW
Sbjct: 411 KKYLESW 417




333|SequenceR|1670|1661|LHLVTDEKYI

>sp|TF2B2_HALVD|TRANSCRIPTION initiation factor IIB 2|Haloferax volcanii (strain ATCC 29605

Query: 2 HLVTDEKY 9
HLVTDE++
Sbjct: 43 HLVTDEEH 50


>sp|CS3HE_THETK|CRISPR-ASSOCIATED helicase Cas3|Thermoproteus tenax (strain ATCC 35583

Query: 2 HLVTDEKYI 10
HL+ DE Y+
Sbjct: 182 HLIQDEAYL 190


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 1 LHLVTDEKYI 10
HL DE+Y+
Sbjct: 542 FHLSADERYL 551


>sp|MBD_THEVO|MEVALONATE 3,5-bisphosphate decarboxylase|Thermoplasma volcanium (strain ATCC

Query: 4 VTDEKYI 10
VTDEKY+
Sbjct: 100 VTDEKYL 106


>sp|PCKG_THEVO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma volcanium (strain ATCC 51530

Query: 4 VTDEKYI 10
VTD KY+
Sbjct: 140 VTDSKYV 146


>sp|PELO_THEAC|PROTEIN pelota homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LHLVTDEKYI 10
L TDEKY+
Sbjct: 121 LKEATDEKYV 130


>sp|ALAXM_METAC|ALANYL-TRNA editing protein AlaX-M|Methanosarcina acetivorans (strain ATCC

Query: 4 VTDEKYI 10
VTD+KY+
Sbjct: 22 VTDDKYV 28


>sp|DHA_METMP|ALANINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 4 VTDEKYI 10
+TDE+Y+
Sbjct: 45 ITDEEYV 51




334|SequenceR|1675|1666|IERLCLHLVT

>sp|Y541_ARCFU|UNCHARACTERIZED protein AF_0541|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IERLCLHLVT 10
+E LC HL+T
Sbjct: 42 LEELCSHLMT 51


>sp|CBID_METVS|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 IERLCLHL 8
+ERLCL
Sbjct: 335 VERLCLRF 342




335|SequenceR|1680|1671|ARQQQIERLC

>sp|RIFK_METLZ|RIBOFLAVIN kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 QQQIERLC 10
Q+Q E+LC
Sbjct: 118 QEQFEKLC 125




336|SequenceR|1685|1676|TLKQAARQQQ

***** No hits found ******


337|SequenceR|1690|1681|QNFAFTLKQA

***** No hits found ******


338|SequenceR|1695|1686|SKPKMQNFAF

>sp|RRP4_METS3|EXOSOME complex component Rrp4|Methanobrevibacter smithii (strain ATCC

Query: 2 KPKMQNF 8
KPK+QNF
Sbjct: 240 KPKLQNF 246


>sp|RL3_METAR|LARGE ribosomal subunit protein uL3|Methanocella arvoryzae (strain DSM

Query: 2 KPKMQNFA 9
KPKM+N+A
Sbjct: 24 KPKMRNWA 31


>sp|RL3_METBU|LARGE ribosomal subunit protein uL3|Methanococcoides burtonii (strain

Query: 1 SKPKMQNFA 9
++PK+Q FA
Sbjct: 35 AEPKLQGFA 43


>sp|RL3_METAC|LARGE ribosomal subunit protein uL3|Methanosarcina acetivorans (strain

Query: 2 KPKMQNFA 9
+PK+Q+FA
Sbjct: 36 EPKLQSFA 43


>sp|RL3_METMA|LARGE ribosomal subunit protein uL3|Methanosarcina mazei (strain ATCC

Query: 2 KPKMQNFA 9
+PK+Q+FA
Sbjct: 36 EPKLQSFA 43


>sp|PNCB_METBU|NICOTINATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 1 SKPKMQNFA 9
SKP QNF+
Sbjct: 265 SKPFFQNFS 273




339|SequenceR|1700|1691|PSYPISKPKM

>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 YPISKPKM 10
YP+SKP++
Sbjct: 810 YPVSKPEL 817


>sp|GLMD_THEKO|GLUCOSAMINE-6-PHOSPHATE deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 YPISKPKM 10
YP+ KP++
Sbjct: 78 YPVGKPEL 85


>sp|RL10_THESM|LARGE ribosomal subunit protein uL10|Thermococcus sibiricus (strain DSM

Query: 1 PSYPISK 7
P+YP+SK
Sbjct: 34 PAYPLSK 40


>sp|RL10_THEKO|LARGE ribosomal subunit protein uL10|Thermococcus kodakarensis (strain

Query: 1 PSYPISK 7
P+YP+SK
Sbjct: 34 PAYPLSK 40


>sp|RASEA_THEKO|ARCHAEOSINE synthase subunit beta|Thermococcus kodakarensis (strain ATCC

Query: 2 SYPISKPKM 10
SYP + PK+
Sbjct: 40 SYPTAAPKV 48


>sp|COXX2_CENSY|PROTOHEME IX farnesyltransferase 2|Cenarchaeum symbiosum (strain A)

Query: 3 YPISKPKM 10
Y +SKPK+
Sbjct: 14 YELSKPKI 21


>sp|RL10_THEGJ|LARGE ribosomal subunit protein uL10|Thermococcus gammatolerans (strain

Query: 1 PSYPISK 7
P+YP+SK
Sbjct: 34 PAYPLSK 40


>sp|RL10_THEON|LARGE ribosomal subunit protein uL10|Thermococcus onnurineus (strain

Query: 1 PSYPISK 7
P+YP+SK
Sbjct: 34 PAYPLSK 40




340|SequenceR|1705|1696|VELFRPSYPI

>sp|Y1127_METJA|UNCHARACTERIZED protein MJ1127|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ELFRPSYPI 10
E+ RP YP+
Sbjct: 122 EVGRPHYPV 130


>sp|SYFB_METS5|PHENYLALANINE--TRNA ligase beta subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 ELFRPSYPI 10
EL PSYP+
Sbjct: 69 ELGEPSYPV 77


>sp|RS5_SULTO|SMALL ribosomal subunit protein uS5|Sulfurisphaera tokodaii (strain DSM

Query: 2 ELFRPSYPI 10
E+F +YPI
Sbjct: 33 EIFEKNYPI 41


>sp|IF2P_AERPE|PROBABLE translation initiation factor IF-2|Aeropyrum pernix (strain ATCC

Query: 3 LFRPSYPI 10
+ RP YP+
Sbjct: 503 VIRPGYPV 510


>sp|IF2P_SACS2|PROBABLE translation initiation factor IF-2|Saccharolobus solfataricus

Query: 3 LFRPSYPI 10
+ RP YP+
Sbjct: 495 IIRPKYPL 502




341|SequenceR|1710|1701|CYLLFVELFR

>sp|AATB_SACS2|A-TYPE ATP synthase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 2 YLLFVELF 9
YLLF ELF
Sbjct: 403 YLLFGELF 410


>sp|AATB_SACI7|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 YLLFVELF 9
YLLF ELF
Sbjct: 403 YLLFGELF 410


>sp|AATB_SACI6|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.4 /

Query: 2 YLLFVELF 9
YLLF ELF
Sbjct: 403 YLLFGELF 410


>sp|AATB_SACI4|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.14.25 /

Query: 2 YLLFVELF 9
YLLF ELF
Sbjct: 403 YLLFGELF 410


>sp|AATB_SACI3|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.27)

Query: 2 YLLFVELF 9
YLLF ELF
Sbjct: 403 YLLFGELF 410


>sp|AATB_SACI2|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 YLLFVELF 9
YLLF ELF
Sbjct: 403 YLLFGELF 410


>sp|AATB_SACI1|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 YLLFVELF 9
YLLF ELF
Sbjct: 403 YLLFGELF 410


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YLLFVELFR 10
Y +FVELF+
Sbjct: 70 YDIFVELFK 78


>sp|AATB_SULTO|A-TYPE ATP synthase subunit B|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YLLFVELF 9
YLLF E F
Sbjct: 405 YLLFAEAF 412


>sp|AATB_SULAC|A-TYPE ATP synthase subunit B|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YLLFVELF 9
YLLF E F
Sbjct: 406 YLLFAEQF 413


>sp|SECY_ARCFU|PROTEIN translocase subunit SecY|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YLLFVELF 9
+L+F++LF
Sbjct: 155 FLIFIQLF 162




342|SequenceR|1715|1706|QGASHCYLLF

>sp|CCA_ARCFU|CCA-ADDING enzyme|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 CYLLF 10
CYLLF
Sbjct: 327 CYLLF 331


>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain ATCC

Query: 3 ASHCYLLF 10
A+H Y+LF
Sbjct: 107 ATHIYVLF 114


>sp|DPHB_SACS2|DIPHTHINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 HCYLL 9
HCYL+
Sbjct: 119 HCYLI 123


>sp|DPHB_SACI7|DIPHTHINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 5 HCYLL 9
HCYL+
Sbjct: 119 HCYLI 123


>sp|DPHB_SACI6|DIPHTHINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 5 HCYLL 9
HCYL+
Sbjct: 119 HCYLI 123


>sp|DPHB_SACI4|DIPHTHINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 5 HCYLL 9
HCYL+
Sbjct: 119 HCYLI 123


>sp|DPHB_SACI3|DIPHTHINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 5 HCYLL 9
HCYL+
Sbjct: 119 HCYLI 123


>sp|DPHB_SACI2|DIPHTHINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 HCYLL 9
HCYL+
Sbjct: 119 HCYLI 123


>sp|DPHB_SACI1|DIPHTHINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 5 HCYLL 9
HCYL+
Sbjct: 119 HCYLI 123


>sp|SYT_METPE|THREONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 QGASHCY 7
+GA HC+
Sbjct: 345 EGALHCF 351




343|SequenceR|1720|1711|EVAFWQGASH

>sp|RS8E_METMP|SMALL ribosomal subunit protein eS8|Methanococcus maripaludis (strain

Query: 2 VAFWQGAS 9
+A WQGAS
Sbjct: 1 MAIWQGAS 8


>sp|RS8E_METM7|SMALL ribosomal subunit protein eS8|Methanococcus maripaludis (strain

Query: 2 VAFWQGAS 9
+A WQGAS
Sbjct: 1 MAIWQGAS 8


>sp|RS8E_METM6|SMALL ribosomal subunit protein eS8|Methanococcus maripaludis (strain

Query: 2 VAFWQGAS 9
+A WQGAS
Sbjct: 1 MAIWQGAS 8


>sp|RS8E_METM5|SMALL ribosomal subunit protein eS8|Methanococcus maripaludis (strain

Query: 2 VAFWQGAS 9
+A WQGAS
Sbjct: 1 MAIWQGAS 8


>sp|RS4_THEPD|SMALL ribosomal subunit protein uS4|Thermofilum pendens (strain DSM

Query: 5 WQGASH 10
WQG SH
Sbjct: 11 WQGPSH 16


>sp|RS8E_METST|SMALL ribosomal subunit protein eS8|Methanosphaera stadtmanae (strain

Query: 2 VAFWQGAS 9
+A WQG+S
Sbjct: 1 MAIWQGSS 8


>sp|G3P_THEVO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EVAFWQGA 8
E+A W+G+
Sbjct: 276 EIAIWEGS 283


>sp|RS8E_METVS|SMALL ribosomal subunit protein eS8|Methanococcus vannielii (strain

Query: 2 VAFWQGAS 9
+A WQG S
Sbjct: 1 MAIWQGTS 8


>sp|SYR_AERPE|ARGININE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 5 WQGASH 10
W+GA H
Sbjct: 611 WEGARH 616


>sp|HELS_PYRCJ|ATP-DEPENDENT DNA helicase Hel308|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EVAFWQGA 8
EVA W GA
Sbjct: 185 EVAAWLGA 192




344|SequenceR|1725|1716|GTMCEEVAFW

>sp|ARLY_METMJ|ARGININOSUCCINATE lyase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 MCEEVAFW 10
+CEE+ W
Sbjct: 254 LCEELVLW 261


>sp|MPTA_METHJ|GTP cyclohydrolase MptA|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GTMCEEV 7
GT+C+EV
Sbjct: 133 GTLCQEV 139


>sp|PUR7_THEVO|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 TMCEEVAFW 10
++C AFW
Sbjct: 44 SLCRTSAFW 52


>sp|PIMT_METVS|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GTMCEEV 7
G MCEE+
Sbjct: 66 GIMCEEL 72


>sp|PIMT_METMP|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GTMCEEV 7
G MCEE+
Sbjct: 66 GIMCEEL 72


>sp|PIMT_METM7|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 GTMCEEV 7
G MCEE+
Sbjct: 66 GIMCEEL 72


>sp|PIMT_METM6|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 GTMCEEV 7
G MCEE+
Sbjct: 66 GIMCEEL 72


>sp|PIMT_METM5|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 GTMCEEV 7
G MCEE+
Sbjct: 66 GIMCEEL 72


>sp|TRPD_METM5|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 3 MCEEVAF 9
+CE VAF
Sbjct: 190 LCENVAF 196




345|SequenceR|1730|1721|YKRFEGTMCE

>sp|RL14_PICTO|LARGE ribosomal subunit protein uL14|Picrophilus torridus (strain ATCC

Query: 1 YKRFEGTMCE 10
Y+R +GTM E
Sbjct: 80 YRRADGTMIE 89


>sp|PYRC_ARCFU|DIHYDROOROTASE fulgidus (strain ATCC 49558

Query: 1 YKRFEGTM 8
YKRFEG +
Sbjct: 161 YKRFEGVV 168


>sp|RL14_THEVO|LARGE ribosomal subunit protein uL14|Thermoplasma volcanium (strain

Query: 1 YKRFEGTMCE 10
Y+R +GTM E
Sbjct: 80 YRRPDGTMVE 89


>sp|PURQ_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Saccharolobus solfataricus (strain ATCC

Query: 3 RFEGTMCE 10
+F GT CE
Sbjct: 6 KFPGTTCE 13


>sp|F16PA_METHJ|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 RFEGTMCE 10
RFE + CE
Sbjct: 97 RFENSRCE 104


>sp|PURQ_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanosphaera stadtmanae (strain ATCC

Query: 3 RFEGTMCE 10
RF GT C+
Sbjct: 13 RFPGTNCD 20


>sp|RADB_METBU|DNA repair and recombination protein|Methanococcoides burtonii (strain

Query: 3 RFEGTMCE 10
R EGT CE
Sbjct: 209 RPEGTTCE 216


>sp|PURQ_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RFEGTMCE 10
R EGT CE
Sbjct: 12 RMEGTNCE 19


>sp|Y3997_METAC|UPF0288 protein MA_3997|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YKRFEGT 7
YK +EGT
Sbjct: 87 YKEYEGT 93


>sp|PURQ_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanopyrus kandleri (strain AV19 /

Query: 3 RFEGTMCE 10
RF GT C+
Sbjct: 8 RFPGTNCD 15


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 YKRFEGTMCE 10
Y+R G CE
Sbjct: 148 YERARGDQCE 157


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 YKRFEGTMCE 10
Y+R G CE
Sbjct: 148 YERARGDQCE 157


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 YKRFEGTMCE 10
Y+R G CE
Sbjct: 148 YERARGDQCE 157


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YKRFEGTMCE 10
Y+R G CE
Sbjct: 148 YERARGDQCE 157


>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 YKRFEGTMCE 10
Y+R G CE
Sbjct: 148 YERARGDQCE 157




346|SequenceR|1735|1726|GNNNNYKRFE

>sp|Y187_THEON|UPF0292 protein TON_0187|Thermococcus onnurineus (strain NA1)

Query: 5 NYKRFE 10
NYKRFE
Sbjct: 5 NYKRFE 10


>sp|Y1700_PYRHO|UPF0292 protein PH1700|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 NYKRFE 10
NYKRFE
Sbjct: 5 NYKRFE 10


>sp|RIBL_METST|FAD synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 NNYKRFE 10
N+YK+FE
Sbjct: 117 NDYKKFE 123


>sp|RL18_STAMF|LARGE ribosomal subunit protein uL18|Staphylothermus marinus (strain

Query: 1 GNNNNYKRFE 10
G N YKR++
Sbjct: 17 GKTNYYKRYK 26


>sp|RS19_THEVO|SMALL ribosomal subunit protein uS19|Thermoplasma volcanium (strain ATCC

Query: 2 NNNNYKRFE 10
N N+Y +FE
Sbjct: 104 NGNSYSKFE 112


>sp|SYR_ARCFU|ARGININE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 NNNYKRF 9
N NY+RF
Sbjct: 307 NENYERF 313


>sp|HMDH_PYRAB|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus abyssi (strain GE5 /

Query: 3 NNNYKRFE 10
NN Y RFE
Sbjct: 182 NNLYLRFE 189


>sp|RL18_HYPBU|LARGE ribosomal subunit protein uL18|Hyperthermus butylicus (strain DSM

Query: 1 GNNNNYKRF 9
G N YKR+
Sbjct: 17 GKTNYYKRY 25


>sp|HMDH_PYRHO|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 NNNYKRFE 10
NN Y RFE
Sbjct: 187 NNLYLRFE 194


>sp|RL18_AERPE|LARGE ribosomal subunit protein uL18|Aeropyrum pernix (strain ATCC

Query: 1 GNNNNYKRF 9
G N Y+RF
Sbjct: 17 GKTNYYRRF 25


>sp|DADD_METM7|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C7 /

Query: 1 GNNNNYKRFE 10
G+NNN FE
Sbjct: 297 GSNNNMNLFE 306




347|SequenceR|1740|1731|PIIEDGNNNN

>sp|SYFB_METHJ|PHENYLALANINE--TRNA ligase beta subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PIIEDGNNN 9
P+IED N N
Sbjct: 193 PLIEDANGN 201


>sp|SYFB_METAC|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PIIEDGNNN 9
PII D N+N
Sbjct: 193 PIILDANDN 201


>sp|GPMA_METAC|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosarcina acetivorans (strain ATCC

Query: 1 PIIEDGNN 8
PI++DG N
Sbjct: 181 PILQDGKN 188


>sp|FLPA_THEAC|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermoplasma acidophilum (strain

Query: 1 PIIEDGN 7
PI+ED N
Sbjct: 128 PILEDAN 134


>sp|AATE_METM7|A-TYPE ATP synthase subunit E|Methanococcus maripaludis (strain C7 /

Query: 2 IIEDGNNN 9
I+ED N N
Sbjct: 10 IVEDANKN 17


>sp|AATE_METMP|A-TYPE ATP synthase subunit E|Methanococcus maripaludis (strain DSM

Query: 2 IIEDGNNN 9
I+ED N N
Sbjct: 10 IVEDANKN 17


>sp|AATE_METM6|A-TYPE ATP synthase subunit E|Methanococcus maripaludis (strain C6 /

Query: 2 IIEDGNNN 9
I+ED N N
Sbjct: 10 IVEDANKN 17


>sp|SYE_CENSY|GLUTAMATE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 PIIEDG 6
P+IEDG
Sbjct: 336 PLIEDG 341


>sp|AATE_METM5|A-TYPE ATP synthase subunit E|Methanococcus maripaludis (strain C5 /

Query: 2 IIEDGNNN 9
I+ED N N
Sbjct: 10 IVEDANKN 17


>sp|TRPA_METAC|TRYPTOPHAN synthase alpha chain|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IIEDGNNNN 10
IIE+GN N
Sbjct: 246 IIEEGNGVN 254


>sp|HPPA2_METAC|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Methanosarcina acetivorans

Query: 2 IIEDGNN 8
+IEDGN+
Sbjct: 612 LIEDGNH 618


>sp|Y729_METJA|CBS domain-containing protein MJ0729|Methanocaldococcus jannaschii

Query: 1 PIIEDGN 7
P+IEDG
Sbjct: 39 PVIEDGK 45


>sp|FLPA_THEVO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermoplasma volcanium (strain

Query: 1 PIIEDGNN 8
PI+ED N+
Sbjct: 125 PILEDANS 132


>sp|ARCC_HALSA|CARBAMATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PIIEDGNN 8
P++EDG++
Sbjct: 188 PVVEDGDS 195


>sp|SYFB_METST|PHENYLALANINE--TRNA ligase beta subunit|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PIIEDGNNN 9
P+I DGN N
Sbjct: 196 PLIVDGNGN 204


>sp|MPTA_META3|GTP cyclohydrolase MptA|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 EDGNNN 9
+DGNNN
Sbjct: 137 KDGNNN 142




348|SequenceR|1745|1736|ELTNTPIIED

>sp|Y688_THEON|UPF0284 protein TON_0688|Thermococcus onnurineus (strain NA1)

Query: 1 ELTNTPIIE 9
EL+NTPI E
Sbjct: 125 ELSNTPIEE 133


>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ELTNTPII 8
ELT+TP+I
Sbjct: 107 ELTHTPLI 114


>sp|TFE_CALMQ|TRANSCRIPTION factor E|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 ELTNTPI 7
+LTNTPI
Sbjct: 117 QLTNTPI 123


>sp|DHYS_METS5|PROBABLE deoxyhypusine synthase|Metallosphaera sedula (strain ATCC 51363

Query: 3 TNTPII 8
TNTPII
Sbjct: 182 TNTPII 187


>sp|COBQ_METMP|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ELTNTPII 8
ELTN P+I
Sbjct: 214 ELTNIPVI 221


>sp|GCS2_HALVD|GLUTAMATE--CYSTEINE ligase|Haloferax volcanii (strain ATCC 29605

Query: 3 TNTPIIED 10
T TP+IED
Sbjct: 62 TQTPLIED 69


>sp|COBQ_METM7|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C7 /

Query: 1 ELTNTPII 8
ELTN P+I
Sbjct: 214 ELTNIPVI 221


>sp|COBQ_METM6|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C6 /

Query: 1 ELTNTPII 8
ELTN P+I
Sbjct: 214 ELTNIPVI 221


>sp|COBQ_METVS|PROBABLE cobyric acid synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ELTNTPII 8
ELTN P+I
Sbjct: 214 ELTNIPVI 221


>sp|COBQ_METST|PROBABLE cobyric acid synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ELTNTPII 8
ELTN P+I
Sbjct: 214 ELTNIPVI 221


>sp|CBIA_SULTO|COBYRINATE a,c-diamide synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ELTNTPII 8
E+T TPII
Sbjct: 107 EVTKTPII 114


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 3 TNTPIIED 10
TNTP++ D
Sbjct: 992 TNTPLVLD 999


>sp|GCS2_HALWD|GLUTAMATE--CYSTEINE ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 TNTPIIED 10
T TP++ED
Sbjct: 64 TQTPLLED 71


>sp|PURL_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ELTNTPIIE 9
E+TN P+I+
Sbjct: 327 EITNEPVIK 335


>sp|COBQ_META3|PROBABLE cobyric acid synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 ELTNTPII 8
ELTN P++
Sbjct: 214 ELTNIPVL 221


>sp|GPMI_HALWD|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 NTPIIED 10
NTP +ED
Sbjct: 237 NTPAVED 243


>sp|SYH_SULAC|HISTIDINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 TPIIED 10
TPI+ED
Sbjct: 42 TPIVED 47


>sp|SYH_SULTO|HISTIDINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 TPIIED 10
TPI+ED
Sbjct: 42 TPIVED 47




349|SequenceR|1750|1741|ALMIEELTNT

>sp|PANE_PYRHO|2-DEHYDROPANTOATE 2-reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ALMIEELTN 9
LMIE LTN
Sbjct: 42 GLMIEGLTN 50


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 ALMIEELTN 9
L IEELTN
Sbjct: 439 GLKIEELTN 447


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 ALMIEELTN 9
L IEELTN
Sbjct: 439 GLKIEELTN 447


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 ALMIEELTN 9
L IEELTN
Sbjct: 439 GLKIEELTN 447


>sp|ATGT_KORCO|TRNA-GUANINE(15) transglycosylase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 ALMIEELTNT 10
A M EEL+NT
Sbjct: 152 ASMREELSNT 161


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ALMIEELTN 9
L IEELTN
Sbjct: 439 GLKIEELTN 447


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 ALMIEELTN 9
L IEELTN
Sbjct: 439 GLKIEELTN 447


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 ALMIEELTN 9
L IEELTN
Sbjct: 439 GLKIEELTN 447


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 ALMIEELTN 9
L IEELTN
Sbjct: 439 GLKIEELTN 447


>sp|RS17E_THEGJ|SMALL ribosomal subunit protein eS17|Thermococcus gammatolerans (strain

Query: 3 MIEELTN 9
M++ELTN
Sbjct: 34 MVQELTN 40


>sp|GCH1_CALMQ|GTP cyclohydrolase 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 ALMIEELTN 9
A M+EELTN
Sbjct: 36 ANMLEELTN 44




350|SequenceR|1755|1746|TWHSFALMIE

>sp|PGMUT_SULTO|PHOSPHOGLUCOSAMINE/PHOSPHOGALACTOSAMINE mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 SFALMIE 10
SFALM+E
Sbjct: 345 SFALMLE 351




351|SequenceR|1760|1751|RTYEYTWHSF

>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YEYTWHSF 10
Y++ WH F
Sbjct: 640 YKFVWHEF 647


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 YEYTWH 8
Y+Y WH
Sbjct: 457 YDYYWH 462


>sp|TRUA_HALSA|TRNA pseudouridine synthase A|Halobacterium salinarum (strain ATCC

Query: 1 RTYEYTWHS 9
RTY Y W++
Sbjct: 108 RTYVYYWYA 116


>sp|TRUA_HALS3|TRNA pseudouridine synthase A|Halobacterium salinarum (strain ATCC 29341

Query: 1 RTYEYTWHS 9
RTY Y W++
Sbjct: 108 RTYVYYWYA 116


>sp|Y38K_THETE|UNCHARACTERIZED 38 kDa protein in|Thermoproteus tenax

Query: 3 YEYTWH 8
Y+YTW+
Sbjct: 21 YQYTWN 26


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 3 YEYTWH 8
Y+Y WH
Sbjct: 457 YDYFWH 462


>sp|PSB2_THEON|PROTEASOME subunit beta 2|Thermococcus onnurineus (strain NA1)

Query: 1 RTYEYTW 7
R Y++TW
Sbjct: 71 RYYQFTW 77


>sp|PSB2_THEKO|PROTEASOME subunit beta 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RTYEYTW 7
R Y++TW
Sbjct: 70 RYYQFTW 76


>sp|PSB2_THEGJ|PROTEASOME subunit beta 2|Thermococcus gammatolerans (strain DSM 15229

Query: 1 RTYEYTW 7
R Y++TW
Sbjct: 71 RYYQFTW 77


>sp|PSB1_PYRAB|PROTEASOME subunit beta 1|Pyrococcus abyssi (strain GE5 /

Query: 1 RTYEYTW 7
R Y++TW
Sbjct: 70 RYYQFTW 76


>sp|BIOA_METJA|ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EYTWHSF 10
EY WH +
Sbjct: 14 EYIWHPY 20


>sp|RS19_METLZ|SMALL ribosomal subunit protein uS19|Methanocorpusculum labreanum

Query: 1 RTYEYTWHSF 10
R EYT+H +
Sbjct: 12 RREEYTYHGY 21


>sp|SYY_AERPE|TYROSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 EYTWHSF 10
E TWH++
Sbjct: 73 EATWHAY 79


>sp|QUEC_METLZ|7-CYANO-7-DEAZAGUANINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 YEYTWHSF 10
YE+TW +
Sbjct: 182 YEHTWSCY 189


>sp|RL30_PYRAE|LARGE ribosomal subunit protein uL30|Pyrobaculum aerophilum (strain ATCC

Query: 4 EYTWHSF 10
++ WHSF
Sbjct: 96 KWGWHSF 102


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 3 YEYTWHSF 10
Y Y WH
Sbjct: 511 YTYLWHDL 518


>sp|QUEC_METPE|7-CYANO-7-DEAZAGUANINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 YEYTWHSF 10
YE+TW +
Sbjct: 181 YEHTWSCY 188


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 3 YEYTWH 8
Y Y WH
Sbjct: 500 YTYLWH 505


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 3 YEYTWH 8
Y Y WH
Sbjct: 503 YTYLWH 508


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 3 YEYTWH 8
Y Y WH
Sbjct: 481 YTYLWH 486


>sp|GCH1_HYPBU|GTP cyclohydrolase 1|Hyperthermus butylicus (strain DSM 5456

Query: 2 TYEYTWHS 9
T EYTW +
Sbjct: 49 TEEYTWFT 56


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 3 YEYTWH 8
Y Y WH
Sbjct: 514 YTYLWH 519


>sp|Y3040_METAR|UPF0145 protein UNCMA_30400|Methanocella arvoryzae (strain DSM 22066

Query: 1 RTYEYTW 7
+TY +TW
Sbjct: 20 KTYGFTW 26


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 3 YEYTWH 8
Y Y WH
Sbjct: 491 YTYHWH 496


>sp|PYRG_PICTO|CTP synthase|Picrophilus torridus (strain ATCC 700027

Query: 4 EYTWHSF 10
+YTW +F
Sbjct: 265 DYTWSNF 271


>sp|RFCL_STAMF|REPLICATION factor C large subunit|Staphylothermus marinus (strain ATCC 43588

Query: 1 RTYEYTWHSF 10
+ Y Y W +F
Sbjct: 324 KIYRYKWKAF 333


>sp|DHYS1_ARCFU|PROBABLE deoxyhypusine synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TYEYTW 7
TYE+ W
Sbjct: 146 TYEFLW 151


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 4 EYTWH 8
EY WH
Sbjct: 446 EYLWH 450


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 3 YEYTWH 8
Y Y WH
Sbjct: 491 YTYFWH 496


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 3 YEYTWH 8
Y Y WH
Sbjct: 491 YTYFWH 496


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 3 YEYTWH 8
Y Y WH
Sbjct: 491 YTYFWH 496


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 3 YEYTWH 8
Y Y WH
Sbjct: 491 YTYFWH 496


>sp|TFE_META3|TRANSCRIPTION factor E|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 YEYTWHS 9
Y YTW +
Sbjct: 76 YSYTWRA 82


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 YEYTWHSF 10
Y + WH F
Sbjct: 641 YNFIWHEF 648


>sp|TIAS_PYRNV|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrobaculum neutrophilum

Query: 2 TYEYTWHS 9
TY YT+H+
Sbjct: 179 TYPYTFHN 186


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 YTWHSF 10
YTW+ F
Sbjct: 123 YTWNKF 128


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 RTYEYTWHSF 10
R + WH F
Sbjct: 634 RVQTFIWHDF 643




352|SequenceR|1765|1756|VLLEGRTYEY

>sp|MCH_METS3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VLLEGRTYEY 10
VL GRTY Y
Sbjct: 233 VLFGGRTYYY 242


>sp|MCH_METTM|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanothermobacter marburgensis (strain ATCC

Query: 1 VLLEGRTYEY 10
VL GRTY Y
Sbjct: 232 VLFGGRTYYY 241


>sp|MCH_METTH|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 VLLEGRTYEY 10
VL GRTY Y
Sbjct: 232 VLFGGRTYYY 241


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LLEGRTYEY 10
+L GRTYE+
Sbjct: 539 VLSGRTYEF 547


>sp|MCH_METM5|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C5 /

Query: 1 VLLEGRTYEY 10
VL GRTY Y
Sbjct: 232 VLYGGRTYYY 241


>sp|MCH_META3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VLLEGRTYEY 10
VL GRTY Y
Sbjct: 232 VLYGGRTYYY 241


>sp|LHRC2_THEBM|ATP-DEPENDENT helicase Lhr-Core protein 2|Thermococcus barophilus (strain DSM

Query: 2 LLEGRTYEY 10
+L GRTYE+
Sbjct: 546 VLAGRTYEF 554


>sp|Y35K_HALSI|UNCHARACTERIZED 36 kDa protein|Halobacterium salinarum (Halobacterium halobium)

Query: 2 LLEGRTYEY 10
+LEGR +EY
Sbjct: 132 VLEGREWEY 140


>sp|MCH_METM7|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C7 /

Query: 1 VLLEGRTYEY 10
VL GRTY Y
Sbjct: 232 VLYGGRTYYY 241


>sp|PURK_SACS2|N5-CARBOXYAMINOIMIDAZOLE ribonucleotide synthase|Saccharolobus solfataricus (strain ATCC

Query: 1 VLLEGRTYEY 10
++LEGR Y +
Sbjct: 23 IVLEGRKYPF 32


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LLEGRTYEY 10
+L G+TYE+
Sbjct: 539 VLAGKTYEF 547


>sp|Y579_METJA|UNCHARACTERIZED protein MJ0579|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EGRTYEY 10
EG+TY Y
Sbjct: 71 EGKTYNY 77


>sp|DTDA_METB6|D-AMINOACYL-TRNA deacylase|Methanoregula boonei (strain DSM 21154

Query: 5 GRTYEY 10
GRTYE+
Sbjct: 34 GRTYEF 39


>sp|IF2B_METTP|TRANSLATION initiation factor 2 subunit|Methanothrix thermoacetophila (strain

Query: 1 VLLEGRTYE 9
V+ EG TYE
Sbjct: 145 VIEEGETYE 153


>sp|PSTB_AERPE|PHOSPHATE import ATP-binding protein PstB|Aeropyrum pernix (strain ATCC

Query: 2 LLEGRTYEY 10
L EGR EY
Sbjct: 222 LYEGRVIEY 230


>sp|ATGT_SULAC|TRNA-GUANINE(15) transglycosylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LLEGRTYEY 10
L EGR +EY
Sbjct: 319 LKEGRLFEY 327


>sp|TF2B3_HALSA|TRANSCRIPTION initiation factor IIB 3|Halobacterium salinarum (strain ATCC 700922

Query: 5 GRTYEY 10
GRTY Y
Sbjct: 209 GRTYRY 214


>sp|RNZ_SACI6|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LLEGRTYEY 10
L EG+T EY
Sbjct: 169 LKEGKTVEY 177


>sp|RNZ_SACI4|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LLEGRTYEY 10
L EG+T EY
Sbjct: 169 LKEGKTVEY 177


>sp|RNZ_SACI3|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 LLEGRTYEY 10
L EG+T EY
Sbjct: 169 LKEGKTVEY 177


>sp|RNZ_SACI2|RIBONUCLEASE Z|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 LLEGRTYEY 10
L EG+T EY
Sbjct: 169 LKEGKTVEY 177


>sp|RNZ_SACI7|RIBONUCLEASE Z|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 LLEGRTYEY 10
L EG+T EY
Sbjct: 169 LKEGKTVEY 177


>sp|RNZ_SACI1|RIBONUCLEASE Z|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 LLEGRTYEY 10
L EG+T EY
Sbjct: 169 LKEGKTVEY 177




353|SequenceR|1770|1761|GQLDLVLLEG

>sp|MVHG_METTH|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter thermautotrophicus

Query: 2 QLDLVLLEG 10
+LD+V++EG
Sbjct: 54 ELDVVIIEG 62


>sp|MVHG_METTM|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter marburgensis (strain

Query: 2 QLDLVLLEG 10
+LD+V++EG
Sbjct: 54 ELDVVVIEG 62


>sp|SYFB_KORCO|PHENYLALANINE--TRNA ligase beta subunit|Korarchaeum cryptofilum (strain OPF8)

Query: 2 QLDLVLLEG 10
++DLV LEG
Sbjct: 49 RMDLVTLEG 57


>sp|Y3507_METJA|UNCHARACTERIZED protein MJECL07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LDLVLLEG 10
+DL+LL+G
Sbjct: 117 VDLILLDG 124


>sp|FRHG_METTH|COENZYME F420 hydrogenase subunit gamma|Methanothermobacter

Query: 2 QLDLVLLEG 10
++DL L+EG
Sbjct: 56 EMDLALVEG 64




354|SequenceR|1775|1766|LNEGVGQLDL

>sp|QUED_METJA|PUTATIVE 6-carboxy-5,6,7,8-tetrahydropterin synthase|Methanocaldococcus

Query: 1 LNEGVGQ 7
+NEG+GQ
Sbjct: 146 INEGIGQ 152


>sp|QUED_METTH|PUTATIVE 6-carboxy-5,6,7,8-tetrahydropterin synthase|Methanothermobacter

Query: 1 LNEGVGQ 7
+NEG+GQ
Sbjct: 147 VNEGIGQ 153


>sp|Y818_METJA|UNCHARACTERIZED protein MJ0818|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LNEGVGQLDL 10
+N+G G LD+
Sbjct: 72 INDGTGNLDV 81


>sp|APGM_SULTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LNEGVGQLD 9
LNE +G++D
Sbjct: 129 LNEKIGEID 137


>sp|DFX_METTH|DESULFOFERRODOXIN homolog|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LNEGVGQL 8
LN G GQL
Sbjct: 20 LNPGAGQL 27




355|SequenceR|1780|1771|VSPDTLNEGV

>sp|DPOL_THES9|DNA polymerase|Thermococcus sp. (strain 9oN-7)

Query: 1 VSPDTLN 7
VSPDTLN
Sbjct: 418 VSPDTLN 424


>sp|DPOL_THEGO|DNA polymerase|Thermococcus gorgonarius

Query: 1 VSPDTLN 7
VSPDTLN
Sbjct: 418 VSPDTLN 424


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 VSPDTLN 7
VSPDTLN
Sbjct: 418 VSPDTLN 424


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 1 VSPDTLN 7
VSPDTLN
Sbjct: 778 VSPDTLN 784


>sp|DPOL_PYRWO|DNA polymerase|Pyrococcus woesei

Query: 1 VSPDTLN 7
VSPDTLN
Sbjct: 419 VSPDTLN 425


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 1 VSPDTLN 7
VSPDTLN
Sbjct: 419 VSPDTLN 425


>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VSPDTLN 7
VSPDTLN
Sbjct: 419 VSPDTLN 425


>sp|DPOL_PYRGL|DNA polymerase|Pyrococcus glycovorans

Query: 1 VSPDTLN 7
VSPDTLN
Sbjct: 419 VSPDTLN 425


>sp|DPOL_PYRFU|DNA polymerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VSPDTLN 7
VSPDTLN
Sbjct: 419 VSPDTLN 425


>sp|DPOL_PYRAY|DNA polymerase 1|Pyrococcus abyssi

Query: 1 VSPDTLN 7
VSPDTLN
Sbjct: 419 VSPDTLN 425


>sp|DPOL_PYRAB|DNA polymerase 1|Pyrococcus abyssi (strain GE5 /

Query: 1 VSPDTLN 7
VSPDTLN
Sbjct: 419 VSPDTLN 425


>sp|DPOL_DESST|DNA polymerase|Desulfurococcus sp. (strain Tok)

Query: 1 VSPDTLN 7
VSPDTLN
Sbjct: 418 VSPDTLN 424


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VSPDTLN 7
VSPDTLN
Sbjct: 778 VSPDTLN 784


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 1 VSPDTLN 7
VSPDT N
Sbjct: 385 VSPDTFN 391


>sp|RNH2_THEVO|RIBONUCLEASE HII|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VSPDTLNE 8
VSP+TLN+
Sbjct: 67 VSPETLNK 74


>sp|DPOL3_SACSH|DNA polymerase 3|Saccharolobus shibatae (strain ATCC 51178

Query: 1 VSPDTLNEG 9
+SPDTL +G
Sbjct: 437 ISPDTLVKG 445


>sp|CSG_HALGI|CELL surface glycoprotein|Haloferax gibbonsii

Query: 1 VSPDTLNEG 9
VSPDT+++G
Sbjct: 40 VSPDTVDKG 48


>sp|MCRX_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VSPDTLNE 8
V+P+T+NE
Sbjct: 127 VTPETINE 134


>sp|MCRA_METKA|METHYL-COENZYME M reductase I subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 VSPDTLNE 8
V+P+T+NE
Sbjct: 127 VTPETINE 134


>sp|MCRA_METVA|METHYL-COENZYME M reductase subunit alpha|Methanococcus vannielii

Query: 1 VSPDTLNE 8
V+P+T+NE
Sbjct: 128 VTPETINE 135


>sp|MCRA_METVO|METHYL-COENZYME M reductase subunit alpha|Methanococcus voltae

Query: 1 VSPDTLNE 8
V+P+T+NE
Sbjct: 128 VTPETINE 135


>sp|MCRA_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VSPDTLNE 8
V+P+T+NE
Sbjct: 127 VTPETINE 134


>sp|HIS6_METLZ|IMIDAZOLE glycerol phosphate synthase subunit|Methanocorpusculum labreanum

Query: 2 SPDTLNEG 9
+PD +NEG
Sbjct: 110 TPDVINEG 117


>sp|MCRX_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 1 VSPDTLNE 8
V+P+T+NE
Sbjct: 128 VTPETINE 135


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 1 VSPDTLNE 8
VSPDTL +
Sbjct: 421 VSPDTLEK 428


>sp|MCRX_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 VSPDTLNE 8
V+P+T+NE
Sbjct: 127 VTPETINE 134


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VSPDTLN 7
+SPDTL+
Sbjct: 806 ISPDTLD 812


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 1 VSPDTL 6
VSPDTL
Sbjct: 781 VSPDTL 786


>sp|MCRX_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 VSPDTLNE 8
V+P+T+NE
Sbjct: 127 VTPETINE 134


>sp|GLYA_CALMQ|SERINE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 3 PDTLNEG 9
P++LNEG
Sbjct: 213 PNSLNEG 219


>sp|HDLA_ARCPA|HETERODISULFIDE reductase subunit A-like protein|Archaeoglobus profundus (strain

Query: 3 PDTLNEGV 10
PD NEG+
Sbjct: 265 PDEFNEGL 272


>sp|CHEA_HALS3|CHEMOTAXIS protein CheA|Halobacterium salinarum (strain ATCC 29341

Query: 2 SPDTLNEG 9
SPD +N+G
Sbjct: 203 SPDAINDG 210


>sp|DPOL1_METTH|DNA polymerase PolB subunit 1|Methanothermobacter thermautotrophicus

Query: 1 VSPDTLNE 8
+SPDTL +
Sbjct: 455 ISPDTLTD 462


>sp|NADK_THEON|NAD kinase|Thermococcus onnurineus (strain NA1)

Query: 1 VSPDTLNE 8
V PD LNE
Sbjct: 131 VVPDALNE 138


>sp|UVRB_NATPD|UVRABC system protein B|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VSPDTLNEG 9
V+PDT++E
Sbjct: 621 VAPDTVDEA 629


>sp|HELS_METAR|ATP-DEPENDENT DNA helicase Hel308|Methanocella arvoryzae (strain DSM 22066

Query: 3 PDTLNEGV 10
P TL EGV
Sbjct: 207 PTTLKEGV 214


>sp|DNAJ_HALLT|CHAPERONE protein DnaJ|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 VSPDTLNE 8
V PD+LNE
Sbjct: 348 VIPDSLNE 355


>sp|GLCD2_VULM7|GLUCOSE 1-dehydrogenase 2|Vulcanisaeta moutnovskia (strain 768-28)

Query: 2 SPDTLNEGV 10
SP +NEG+
Sbjct: 240 SPQVINEGL 248


>sp|HIS6_HALMA|IMIDAZOLE glycerol phosphate synthase subunit|Haloarcula marismortui (strain

Query: 3 PDTLNEGV 10
PD +NEG
Sbjct: 116 PDLINEGA 123


>sp|DNAJ_NATPD|CHAPERONE protein DnaJ|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VSPDTLNE 8
V+P++LNE
Sbjct: 342 VTPESLNE 349


>sp|DNLI_METTH|DNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VSPDTLNEGV 10
V PD LN+ +
Sbjct: 380 VGPDNLNDAL 389




356|SequenceR|1785|1776|EEAKIVSPDT

>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii

Query: 3 AKIVSPDT 10
AKIV+PDT
Sbjct: 29 AKIVTPDT 36


>sp|FENR2_SULAC|FERREDOXIN--NADP reductase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EEAKIVSPD 9
E+AK+ SPD
Sbjct: 71 EQAKMFSPD 79


>sp|FENR_SULTO|FERREDOXIN--NADP reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EEAKIVSPD 9
E+AK+ SPD
Sbjct: 71 EQAKMFSPD 79


>sp|FENR1_SULAC|FERREDOXIN--NADP reductase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EEAKIVSPD 9
E+AK+ SPD
Sbjct: 66 EQAKMFSPD 74


>sp|VORD_PYRAB|KETOISOVALERATE oxidoreductase subunit VorD|Pyrococcus abyssi (strain GE5 /

Query: 1 EEAKIVSPDT 10
EEA+++SP +
Sbjct: 10 EEARVISPKS 19


>sp|RRP42_THEVO|EXOSOME complex component Rrp42|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EEAKIVSPD 9
E+K++SPD
Sbjct: 117 RESKMISPD 125


>sp|NADA_PYRAB|QUINOLINATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 EEAKIVSPD 9
E AKI++PD
Sbjct: 63 ETAKILNPD 71


>sp|NADA_PYRHO|QUINOLINATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EEAKIVSPD 9
E AKI++PD
Sbjct: 63 ETAKILNPD 71


>sp|NADA_PYRFU|QUINOLINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EEAKIVSPD 9
E AKI++PD
Sbjct: 67 ETAKILNPD 75


>sp|TRM1_SULTO|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfurisphaera tokodaii

Query: 1 EEAKIVSP 8
EE+K VSP
Sbjct: 313 EESKYVSP 320


>sp|GCSH2_SACS2|PROBABLE glycine cleavage system H|Saccharolobus solfataricus (strain ATCC

Query: 3 AKIVSPDT 10
AK+ SPDT
Sbjct: 25 AKLESPDT 32




357|SequenceR|1790|1781|DCSRKEEAKI

>sp|ADEC_METTP|ADENINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DCSRKEEA 8
+C+R EEA
Sbjct: 219 ECTRAEEA 226




358|SequenceR|1795|1786|PGFVMDCSRK

>sp|MPTA_METVS|GTP cyclohydrolase MptA|Methanococcus vannielii (strain ATCC 35089

Query: 1 PGFVMDCSRK 10
P FV DC+R+
Sbjct: 253 PKFVEDCARE 262


>sp|MPTA_METMP|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain DSM 14266

Query: 1 PGFVMDCSRK 10
P FV DC+R+
Sbjct: 253 PKFVEDCARE 262


>sp|MPTA_METM7|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain C7 /

Query: 1 PGFVMDCSRK 10
P FV DC+R+
Sbjct: 253 PKFVEDCARE 262


>sp|MPTA_METM6|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain C6 /

Query: 1 PGFVMDCSRK 10
P FV DC+R+
Sbjct: 253 PKFVEDCARE 262


>sp|MPTA_METM5|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain C5 /

Query: 1 PGFVMDCSRK 10
P FV DC+R+
Sbjct: 253 PKFVEDCARE 262


>sp|MPTA_META3|GTP cyclohydrolase MptA|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PGFVMDCSRK 10
P FV DC+R+
Sbjct: 251 PKFVEDCARE 260


>sp|MPTA_METJA|GTP cyclohydrolase MptA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PGFVMDCSRK 10
P FV DC R+
Sbjct: 252 PKFVEDCVRE 261


>sp|MPTA_METMJ|GTP cyclohydrolase MptA|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PGFVMDCSRK 10
P FV DC R+
Sbjct: 251 PRFVEDCVRE 260


>sp|MPTA_METBU|GTP cyclohydrolase MptA|Methanococcoides burtonii (strain DSM 6242

Query: 1 PGFVMDCSR 9
P FV DC R
Sbjct: 257 PKFVEDCVR 265


>sp|MPTA_METBF|GTP cyclohydrolase MptA|Methanosarcina barkeri (strain Fusaro /

Query: 1 PGFVMDCSR 9
P FV DC R
Sbjct: 259 PKFVEDCVR 267


>sp|MPTA_METAC|GTP cyclohydrolase MptA|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PGFVMDCSR 9
P FV DC R
Sbjct: 259 PKFVEDCVR 267


>sp|MPTA2_METAR|GTP cyclohydrolase MptA 2|Methanocella arvoryzae (strain DSM 22066

Query: 1 PGFVMDCSR 9
P FV DC R
Sbjct: 250 PKFVEDCVR 258


>sp|MPTA1_METAR|GTP cyclohydrolase MptA 1|Methanocella arvoryzae (strain DSM 22066

Query: 1 PGFVMDCSR 9
P FV DC R
Sbjct: 251 PKFVEDCVR 259


>sp|MPTA_METMA|GTP cyclohydrolase MptA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PGFVMDCSR 9
P FV DC R
Sbjct: 259 PKFVEDCVR 267


>sp|MPTA_METHJ|GTP cyclohydrolase MptA|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PGFVMDCSRK 10
P FV DC R+
Sbjct: 263 PRFVEDCVRE 272


>sp|MPTA_METB6|GTP cyclohydrolase MptA|Methanoregula boonei (strain DSM 21154

Query: 1 PGFVMDCSRK 10
P FV DC R+
Sbjct: 261 PRFVEDCVRE 270


>sp|MPTA_METKA|GTP cyclohydrolase MptA|Methanopyrus kandleri (strain AV19 /

Query: 1 PGFVMDCSRK 10
P FV DC R+
Sbjct: 266 PKFVEDCVRE 275


>sp|MCRX_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PGFVMDCSRK 10
PG V DC K
Sbjct: 158 PGLVWDCYAK 167


>sp|MCRX_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 PGFVMDCSRK 10
PG V DC K
Sbjct: 158 PGLVEDCYAK 167


>sp|MCRX_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 PGFVMDCSRK 10
PG V DC K
Sbjct: 158 PGLVEDCYAK 167


>sp|Y1020_METJA|UNCHARACTERIZED protein MJ1020|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PGFVMDC 7
P FV DC
Sbjct: 76 PSFVKDC 82


>sp|MCRX_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 1 PGFVMDCSRK 10
PG V DC K
Sbjct: 159 PGLVDDCYAK 168


>sp|CCA_METKA|CCA-ADDING enzyme|Methanopyrus kandleri (strain AV19 /

Query: 1 PGFVMD 6
PGFV+D
Sbjct: 210 PGFVID 215


>sp|TRM1_METLZ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocorpusculum labreanum

Query: 2 GFVMDCSR 9
GFVM C +
Sbjct: 232 GFVMQCPK 239


>sp|Y426_ARCFU|UNCHARACTERIZED protein AF_0426|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FVMDCSRK 10
F+M+C+ K
Sbjct: 179 FIMECAEK 186


>sp|PGP_PYRNV|PHOSPHOGLYCOLATE phosphatase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PGFVMDCS 8
PG+V+D S
Sbjct: 131 PGYVVDSS 138


>sp|Y2403_ARCFU|UNCHARACTERIZED protein AF_2403|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 VMDCSRK 10
V+DCSR+
Sbjct: 34 VVDCSRR 40




359|SequenceR|1800|1791|EGLNAPGFVM

>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 1 EGLNAPGFVM 10
E LNAPG V+
Sbjct: 37 EHLNAPGLVI 46


>sp|PRIS_SACI4|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.14.25

Query: 2 GLNAPGFV 9
G NAPG+V
Sbjct: 215 GENAPGWV 222


>sp|PRIS_SACI3|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 2 GLNAPGFV 9
G NAPG+V
Sbjct: 215 GENAPGWV 222


>sp|PRIS_SACI6|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.16.4

Query: 2 GLNAPGFV 9
G NAPG+V
Sbjct: 215 GENAPGWV 222


>sp|NIFD_METTM|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 2 GLNAPGF 8
+NAPGF
Sbjct: 173 AINAPGF 179


>sp|NIFD_METTH|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 2 GLNAPGF 8
+NAPGF
Sbjct: 173 AINAPGF 179


>sp|ARGC_METB6|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoregula boonei (strain DSM 21154

Query: 1 EGLNAPGFV 9
+GL+APG +
Sbjct: 319 DGLDAPGLL 327


>sp|FPOH_METBF|F(420)H(2) dehydrogenase subunit H|Methanosarcina barkeri (strain Fusaro /

Query: 2 GLNAPGFV 9
G N PGF+
Sbjct: 270 GWNVPGFI 277


>sp|XPD_THEAC|ATP-DEPENDENT DNA helicase XPD|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EGLNAPG 7
EG+N PG
Sbjct: 490 EGINFPG 496


>sp|CARA_METVS|CARBAMOYL phosphate synthase small chain|Methanococcus vannielii (strain

Query: 1 EGLNAPGFVM 10
EG+ A GF++
Sbjct: 71 EGIKAEGFIV 80


>sp|Y1571_PYRHO|PUTATIVE transport protein PH1571|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LNAPGFV 9
LN PGF+
Sbjct: 103 LNVPGFL 109


>sp|UPP_THESM|URACIL phosphoribosyltransferase|Thermococcus sibiricus (strain DSM 12597

Query: 2 GLNAPGFVM 10
GLN+ G+++
Sbjct: 197 GLNSKGYIL 205




360|SequenceR|1805|1796|NKIADEGLNA

>sp|AKSA_METTH|HOMOCITRATE synthase AksA|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 IADEGLNA 10
IA+EGLNA
Sbjct: 76 IANEGLNA 83


>sp|HPR_METMA|PUTATIVE hypoxanthine phosphoribosyltransferase|Methanosarcina mazei (strain

Query: 1 NKIADEGLNA 10
NK+ D+GL+A
Sbjct: 95 NKLVDKGLDA 104


>sp|AKSA_METJA|HOMOCITRATE synthase AksA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IADEGLNA 10
IA+EGLNA
Sbjct: 88 IANEGLNA 95


>sp|HPRL_HALMD|HGPRTASE-LIKE protein|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 NKIADEGLNA 10
NK+AD+G +A
Sbjct: 158 NKLADDGYHA 167


>sp|MVK_THEON|MEVALONATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 NKIADEGLN 9
KI+DEGL
Sbjct: 320 TKISDEGLR 328


>sp|DEOC_HALLT|DEOXYRIBOSE-PHOSPHATE aldolase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 NKIADEGLNA 10
N+ AD G+NA
Sbjct: 29 NEAADHGMNA 38


>sp|KHSE_SACI6|HOMOSERINE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 NKIADEG 7
NKIA+EG
Sbjct: 277 NKIAEEG 283


>sp|KHSE_SACI4|HOMOSERINE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 NKIADEG 7
NKIA+EG
Sbjct: 277 NKIAEEG 283


>sp|KHSE_SACI3|HOMOSERINE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 NKIADEG 7
NKIA+EG
Sbjct: 277 NKIAEEG 283


>sp|KHSE_SACI2|HOMOSERINE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 NKIADEG 7
NKIA+EG
Sbjct: 277 NKIAEEG 283


>sp|KHSE_SACI7|HOMOSERINE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 NKIADEG 7
NKIA+EG
Sbjct: 277 NKIAEEG 283


>sp|KHSE_SACI1|HOMOSERINE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 NKIADEG 7
NKIA+EG
Sbjct: 277 NKIAEEG 283


>sp|SYH_NANEQ|HISTIDINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 NKIADEGLN 9
NK+ D GLN
Sbjct: 332 NKLRDLGLN 340


>sp|Y779_METS3|UPF0173 metal-dependent hydrolase Msm_0779|Methanobrevibacter smithii

Query: 3 IADEGLN 9
I DEGLN
Sbjct: 14 ITDEGLN 20


>sp|GGR_METM6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C6 /

Query: 1 NKIADEGLNA 10
K++DE LNA
Sbjct: 345 QKLSDEELNA 354


>sp|GGR_METM5|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C5 /

Query: 1 NKIADEGLNA 10
K++DE LNA
Sbjct: 345 QKLSDEELNA 354




361|SequenceR|1810|1801|HKARFNKIAD

>sp|RADA_METM5|DNA repair and recombination protein|Methanococcus maripaludis (strain

Query: 1 HKARFNKIAD 10
H A NK+AD
Sbjct: 237 HMATLNKLAD 246


>sp|RADA_METMI|DNA repair and recombination protein|Methanococcus maripaludis

Query: 1 HKARFNKIAD 10
H A NK+AD
Sbjct: 237 HMATLNKLAD 246


>sp|RADA_METM6|DNA repair and recombination protein|Methanococcus maripaludis (strain

Query: 1 HKARFNKIAD 10
H A NK+AD
Sbjct: 237 HMATLNKLAD 246


>sp|RADA_METM7|DNA repair and recombination protein|Methanococcus maripaludis (strain

Query: 1 HKARFNKIAD 10
H A NK+AD
Sbjct: 237 HMATLNKLAD 246


>sp|RADA_METMP|DNA repair and recombination protein|Methanococcus maripaludis (strain

Query: 1 HKARFNKIAD 10
H A NK+AD
Sbjct: 237 HMATLNKLAD 246


>sp|RADA_METJA|DNA repair and recombination protein|Methanocaldococcus jannaschii

Query: 1 HKARFNKIAD 10
H A NK+AD
Sbjct: 267 HMATLNKLAD 276


>sp|HIS4_METKA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanopyrus kandleri (strain

Query: 4 RFNKIAD 10
RFN++AD
Sbjct: 158 RFNEVAD 164


>sp|RADA_METVO|DNA repair and recombination protein|Methanococcus voltae

Query: 1 HKARFNKIAD 10
H A NK+AD
Sbjct: 237 HMATLNKLAD 246


>sp|ILVD_METB6|DIHYDROXY-ACID dehydratase|Methanoregula boonei (strain DSM 21154

Query: 3 ARFNKIAD 10
A FN+IAD
Sbjct: 291 ADFNRIAD 298


>sp|FPRA_METTH|COENZYME F420H(2) oxidase|Methanothermobacter thermautotrophicus (strain

Query: 2 KARFNKIAD 10
KAR KIAD
Sbjct: 2 KARAEKIAD 10


>sp|Y663_METJA|UNCHARACTERIZED protein MJ0663|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 FNKIAD 10
FNKIAD
Sbjct: 444 FNKIAD 449


>sp|PGMMM_THEKO|PHOSPHOGLUCOMUTASE/PHOSPHOMANNOMUTASE kodakarensis (strain ATCC BAA-918

Query: 1 HKARFNKIAD 10
H+A++N+I +
Sbjct: 138 HRAKWNEIGE 147




362|SequenceR|1815|1806|CSNCHHKARF

>sp|QUEC_METMJ|7-CYANO-7-DEAZAGUANINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 CSNCHHK 7
CS+CH++
Sbjct: 199 CSSCHYR 205


>sp|SPSS2_METLZ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 CSNCHHKARF 10
C NCH R
Sbjct: 46 CDNCHKPFRL 55


>sp|AMZA_SACS2|ARCHAEMETZINCIN solfataricus (strain ATCC 35092

Query: 1 CSNCHHK 7
C NC HK
Sbjct: 166 CKNCAHK 172


>sp|RPO2C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo2C|Archaeoglobus fulgidus (strain ATCC

Query: 1 CSNCHHKARF 10
C NC H A +
Sbjct: 546 CGNCGHVATY 555


>sp|MOAA_HALWD|PROBABLE GTP 3',8-cyclase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 CSNCH 5
C+NCH
Sbjct: 248 CANCH 252


>sp|MOAA_HALSA|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 700922

Query: 1 CSNCH 5
C+NCH
Sbjct: 272 CANCH 276


>sp|MOAA_HALS3|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 29341

Query: 1 CSNCH 5
C+NCH
Sbjct: 272 CANCH 276


>sp|IF2B_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 5 HHKARF 10
HHK+RF
Sbjct: 25 HHKSRF 30


>sp|IF2B_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 5 HHKARF 10
HHK+RF
Sbjct: 25 HHKSRF 30


>sp|IF2B_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC

Query: 5 HHKARF 10
HHK+RF
Sbjct: 25 HHKSRF 30


>sp|TFE_PYRAE|TRANSCRIPTION factor E|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 CSNCHHK 7
C NCH +
Sbjct: 122 CPNCHMR 128


>sp|KITH_HALSA|THYMIDINE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 CSNCH 5
C NCH
Sbjct: 186 CRNCH 190


>sp|KITH_HALS3|THYMIDINE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 CSNCH 5
C NCH
Sbjct: 186 CRNCH 190


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 1 CSNCHHKA 8
C NC H A
Sbjct: 1064 CENCGHIA 1071


>sp|DNAJ_METAC|CHAPERONE protein DnaJ|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 CSNCHHKAR 9
CS CH + +
Sbjct: 187 CSTCHGRGQ 195


>sp|CDC68_HALSA|ORC1-TYPE DNA replication protein 8|Halobacterium salinarum (strain ATCC

Query: 3 NCHH 6
NCHH
Sbjct: 93 NCHH 96


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CSNCHHKARF 10
CS CH + +
Sbjct: 631 CSKCHTRFKL 640


>sp|KITH_HALWD|THYMIDINE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 CSNCH 5
C NCH
Sbjct: 216 CRNCH 220


>sp|GATA_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcoides burtonii (strain DSM

Query: 5 HHKAR 9
HHKAR
Sbjct: 466 HHKAR 470


>sp|KPTA_AERPE|PROBABLE RNA 2'-phosphotransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 SNCHHKAR 9
SNC KAR
Sbjct: 21 SNCRCKAR 28


>sp|MVHG_METTM|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter marburgensis (strain

Query: 1 CSNCH 5
CS CH
Sbjct: 15 CSGCH 19


>sp|MVHG_METTH|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter thermautotrophicus

Query: 1 CSNCH 5
CS CH
Sbjct: 15 CSGCH 19


>sp|HIS7_ARCFU|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SNCHHK 7
SN HHK
Sbjct: 142 SNSHHK 147


>sp|DTDA_HALSA|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 700922

Query: 1 CSNCHH 6
C N HH
Sbjct: 103 CPNAHH 108


>sp|DTDA_HALS3|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 29341

Query: 1 CSNCHH 6
C N HH
Sbjct: 103 CPNAHH 108


>sp|VHUG_METVO|F420-NON-REDUCING hydrogenase vhu subunit G|Methanococcus voltae

Query: 1 CSNCH 5
CS CH
Sbjct: 15 CSGCH 19


>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 1 CSNCHHK 7
C NC H+
Sbjct: 245 CPNCLHR 251


>sp|VHCG_METVO|F420-NON-REDUCING hydrogenase vhc subunit G|Methanococcus voltae

Query: 1 CSNCH 5
CS CH
Sbjct: 12 CSGCH 16


>sp|VHUG_METJA|F420-NON-REDUCING hydrogenase vhu subunit G|Methanocaldococcus jannaschii (strain

Query: 1 CSNCH 5
CS CH
Sbjct: 16 CSGCH 20


>sp|RNP4_METMJ|RIBONUCLEASE P protein component 4|Methanoculleus marisnigri (strain ATCC

Query: 1 CSNCHHKARF 10
C C H++RF
Sbjct: 89 CLACGHRSRF 98




363|SequenceR|1820|1811|KLKRCCSNCH

>sp|VHCG_METVO|F420-NON-REDUCING hydrogenase vhc subunit G|Methanococcus voltae

Query: 5 CCSNCH 10
CCS CH
Sbjct: 11 CCSGCH 16


>sp|COOS1_METAC|CARBON monoxide dehydrogenase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 KLKRCCSNCH 10
+L CC NC+
Sbjct: 48 QLGICCRNCN 57


>sp|COOS1_METMA|CARBON monoxide dehydrogenase 1|Methanosarcina mazei (strain ATCC

Query: 1 KLKRCCSNCH 10
+L CC NC+
Sbjct: 48 QLGICCRNCN 57


>sp|NARB_HALMT|PUTATIVE respiratory nitrate reductase subunit|Haloferax mediterranei

Query: 5 CCSNC 9
CCS+C
Sbjct: 16 CCSDC 20


>sp|SYS_PYRAB|SERINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 KLKRCCSN 8
K +RCCS+
Sbjct: 448 KKERCCSS 455


>sp|RF1_METJA|PEPTIDE chain release factor subunit|Methanocaldococcus jannaschii (strain

Query: 1 KLKRCCSNC 9
K+K C+NC
Sbjct: 328 KVKIACNNC 336


>sp|CSL4_ARCFU|EXOSOME complex component Csl4|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LKRCCSNC 9
L+ CSNC
Sbjct: 139 LRALCSNC 146


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 5 CCSNCH 10
C SNCH
Sbjct: 578 CLSNCH 583


>sp|QUEC_METMJ|7-CYANO-7-DEAZAGUANINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 6 CSNCH 10
CS+CH
Sbjct: 199 CSSCH 203


>sp|IF2G_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC

Query: 4 RCCSNC 9
R CSNC
Sbjct: 59 RRCSNC 64


>sp|PRIL_METKA|DNA primase large subunit PriL|Methanopyrus kandleri (strain AV19 /

Query: 4 RCCSNC 9
R CSNC
Sbjct: 212 RRCSNC 217


>sp|DNAJ_METAC|CHAPERONE protein DnaJ|Methanosarcina acetivorans (strain ATCC 35395

Query: 6 CSNCH 10
CS CH
Sbjct: 187 CSTCH 191


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 CSNCH 10
CS CH
Sbjct: 631 CSKCH 635


>sp|UVRC_METBU|UVRABC system protein C|Methanococcoides burtonii (strain DSM 6242

Query: 1 KLKRCCSNCH 10
K KR C N H
Sbjct: 157 KGKRACLNYH 166


>sp|NPD_THESM|NAD-DEPENDENT protein deacylase|Thermococcus sibiricus (strain DSM 12597

Query: 1 KLKRCCSN 8
K+KRC N
Sbjct: 245 KVKRCLEN 252




364|SequenceR|1825|1816|KLDPLKLKRC

>sp|SUCC1_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit beta|Archaeoglobus fulgidus (strain

Query: 3 DPLKLKRC 10
DP+K+K C
Sbjct: 286 DPVKMKNC 293


>sp|THIC_PYRFU|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KLDPLKLKR 9
K+DP KL+R
Sbjct: 24 KIDPEKLRR 32


>sp|SEPS_METBF|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KLDPLKLKR 9
K DP K+KR
Sbjct: 2 KFDPEKIKR 10


>sp|ASSY_METS5|ARGININOSUCCINATE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 KLDPLKL 7
KLDP+KL
Sbjct: 227 KLDPVKL 233


>sp|COFH_METKA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanopyrus kandleri (strain AV19 /

Query: 1 KLDPLKLKR 9
KLDP K+ R
Sbjct: 34 KLDPYKVMR 42


>sp|GLPK_HALVD|GLYCEROL kinase|Haloferax volcanii (strain ATCC 29605

Query: 3 DPLKLKR 9
DP+KL+R
Sbjct: 150 DPIKLQR 156


>sp|Y399_ARCFU|UNCHARACTERIZED protein AF_0399|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LDPLKLKRC 10
+D LKLK C
Sbjct: 213 IDSLKLKLC 221


>sp|Y797_METJA|UNCHARACTERIZED ABC transporter permease MJ0797|Methanocaldococcus jannaschii

Query: 1 KLDPLKLKR 9
KLDP+K R
Sbjct: 357 KLDPIKSLR 365


>sp|Y1398_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1398|Methanocaldococcus

Query: 3 DPLKLKR 9
DPLKLK+
Sbjct: 131 DPLKLKQ 137


>sp|FEN_PYRNV|FLAP endonuclease 1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 LDPLKLKR 9
+DPL++KR
Sbjct: 278 VDPLEIKR 285


>sp|RNZ_PYRHO|RIBONUCLEASE Z|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KLDPLKLKR 9
++ P+K+KR
Sbjct: 48 RISPMKIKR 56


>sp|TIAS_THEGJ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus gammatolerans

Query: 1 KLDPLKLKRC 10
K D LK KRC
Sbjct: 366 KGDYLKCKRC 375




365|SequenceR|1830|1821|TYDNRKLDPL

>sp|COFC_HALMA|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 TYDNRKLDPL 10
T D+R LDPL
Sbjct: 62 TVDDRGLDPL 71


>sp|KADA_THEKO|ADENYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 RKLDPL 10
RKLDPL
Sbjct: 56 RKLDPL 61


>sp|EF1A_METMA|ELONGATION factor 1-alpha|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 NRKLDP 9
N+KLDP
Sbjct: 354 NKKLDP 359


>sp|EF1A_METLZ|ELONGATION factor 1-alpha|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 NRKLDP 9
N+KLDP
Sbjct: 354 NKKLDP 359


>sp|EF1A_METBF|ELONGATION factor 1-alpha|Methanosarcina barkeri (strain Fusaro /

Query: 4 NRKLDP 9
N+KLDP
Sbjct: 354 NKKLDP 359


>sp|EF1A_METBU|ELONGATION factor 1-alpha|Methanococcoides burtonii (strain DSM 6242

Query: 4 NRKLDP 9
N+KLDP
Sbjct: 353 NKKLDP 358


>sp|Y891_STAMF|UPF0173 metal-dependent hydrolase Smar_0891|Staphylothermus marinus

Query: 2 YDNRKLD 8
Y NRK+D
Sbjct: 44 YKNRKID 50


>sp|RPO2C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanococcus vannielii (strain ATCC

Query: 3 DNRKLDPL 10
DNRK+ P+
Sbjct: 576 DNRKIPPV 583


>sp|PYRI_METAR|ASPARTATE carbamoyltransferase regulatory chain|Methanocella arvoryzae

Query: 3 DNRKLDP 9
+NR+LDP
Sbjct: 63 ENRELDP 69


>sp|TF2B_METJA|TRANSCRIPTION initiation factor IIB|Methanocaldococcus jannaschii (strain ATCC

Query: 2 YDNRKLDPL 10
Y NRKL+ L
Sbjct: 381 YTNRKLEKL 389


>sp|Y643_PYRHO|UNCHARACTERIZED protein PH0643|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DNRKLDP 9
D+R+LDP
Sbjct: 140 DSRELDP 146


>sp|RPO5_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus shibatae (strain ATCC

Query: 4 NRKLDP 9
NRK+DP
Sbjct: 6 NRKIDP 11


>sp|RPO5_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus islandicus (strain

Query: 4 NRKLDP 9
NRK+DP
Sbjct: 6 NRKIDP 11


>sp|RPO5_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus islandicus (strain

Query: 4 NRKLDP 9
NRK+DP
Sbjct: 6 NRKIDP 11


>sp|RPO5_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus islandicus (strain

Query: 4 NRKLDP 9
NRK+DP
Sbjct: 6 NRKIDP 11


>sp|RPO5_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus islandicus (strain

Query: 4 NRKLDP 9
NRK+DP
Sbjct: 6 NRKIDP 11


>sp|RPO5_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus islandicus (strain

Query: 4 NRKLDP 9
NRK+DP
Sbjct: 6 NRKIDP 11


>sp|RPO5_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo5|Saccharolobus islandicus (strain

Query: 4 NRKLDP 9
NRK+DP
Sbjct: 6 NRKIDP 11


>sp|GYRA_HALL2|DNA gyrase subunit A|Haloferax lucentense (strain DSM 14919

Query: 2 YDNRKLDP 9
YD+RK +P
Sbjct: 160 YDDRKQEP 167


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 2 YDNRKLDPL 10
Y+N +L+PL
Sbjct: 667 YENGELEPL 675


>sp|SYT_HALWD|THREONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 YDNRKLDP 9
Y+N++L+P
Sbjct: 629 YENKRLEP 636


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 2 YDNRKLDPL 10
Y+N +L+PL
Sbjct: 666 YENGELEPL 674




366|SequenceR|1835|1826|IIKDPTYDNR

>sp|HMD_METTW|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermobacter thermautotrophicus (strain

Query: 1 IIKDPTYDNR 10
++ DP +DN+
Sbjct: 60 VVADPVFDNQ 69


>sp|HMD_METTF|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermobacter thermautotrophicus

Query: 1 IIKDPTYDNR 10
++ DP +DN+
Sbjct: 60 VVADPVFDNQ 69


>sp|HMD_METTH|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 IIKDPTYDNR 10
++ DP +DN+
Sbjct: 60 VVADPVFDNQ 69


>sp|HMD_METTM|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 IIKDPTYDNR 10
++ DP +DN+
Sbjct: 60 VVADPVFDNQ 69


>sp|DNLI1_THEPD|DNA ligase 1|Thermofilum pendens (strain DSM 2475

Query: 5 PTYDNR 10
P YDNR
Sbjct: 52 PEYDNR 57


>sp|MSRA_METBU|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcoides burtonii

Query: 2 IKDPTYDN 9
+KDPTY +
Sbjct: 36 LKDPTYKD 43


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IIKDPTYDN 9
I++DP++D+
Sbjct: 105 IVRDPSFDH 113


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 IKDPTY 7
+KDPTY
Sbjct: 538 LKDPTY 543


>sp|HMGCS_METMA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IIKDPTY 7
+IKDP Y
Sbjct: 327 LIKDPVY 333


>sp|HMGCS_METAC|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IIKDPTY 7
+IKDP Y
Sbjct: 327 LIKDPVY 333


>sp|KCY_METB6|CYTIDYLATE kinase|Methanoregula boonei (strain DSM 21154

Query: 3 KDPTYD 8
KDP YD
Sbjct: 55 KDPAYD 60


>sp|ENO_THEAC|ENOLASE acidophilum (strain ATCC 25905

Query: 2 IKDPTYD 8
I+DP YD
Sbjct: 273 IEDPMYD 279


>sp|FENR_IGNH4|FERREDOXIN--NADP reductase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 IIKDPT 6
I+KDPT
Sbjct: 133 IVKDPT 138


>sp|G1PDH_METLZ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanocorpusculum labreanum (strain ATCC

Query: 1 IIKDPTYD 8
I+KD T+D
Sbjct: 8 ILKDKTFD 15


>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IIKDPTYDN 9
+++DP++D+
Sbjct: 104 VVRDPSFDH 112


>sp|HMGCS_METBF|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IIKDPTY 7
+IKDP Y
Sbjct: 327 LIKDPIY 333


>sp|DPOL1_SULOH|DNA polymerase 1|Sulfurisphaera ohwakuensis

Query: 1 IIKDPTYDN 9
+++DP++D+
Sbjct: 105 VVRDPSFDH 113


>sp|EF2_PYRAR|ELONGATION factor 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 IIKDPTYD 8
+I+DPT D
Sbjct: 421 VIEDPTLD 428


>sp|EF2_PYRNV|ELONGATION factor 2|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 IIKDPTYD 8
+I+DPT D
Sbjct: 421 VIEDPTLD 428


>sp|EF2_PYRCJ|ELONGATION factor 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 IIKDPTYD 8
+I+DPT D
Sbjct: 421 VIEDPTLD 428


>sp|EF2_PYRIL|ELONGATION factor 2|Pyrobaculum islandicum (strain DSM 4184

Query: 1 IIKDPTYD 8
+I+DPT D
Sbjct: 421 VIEDPTLD 428




367|SequenceR|1840|1831|EDQPFIIKDP

>sp|CCA_METJA|CCA-ADDING enzyme|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DQPFIIKDP 10
D+PFI+ DP
Sbjct: 237 DEPFIVYDP 245


>sp|CCA_PYRFU|CCA-ADDING enzyme|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EDQPFIIKDP 10
ED+P I+ DP
Sbjct: 233 EDKPLIVIDP 242


>sp|CCA_THEGJ|CCA-ADDING enzyme|Thermococcus gammatolerans (strain DSM 15229

Query: 1 EDQPFIIKDP 10
ED+P I+ DP
Sbjct: 233 EDRPLIVIDP 242


>sp|BIOW_METJA|6-CARBOXYHEXANOATE--COA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDQPFIIK 8
E++PFIIK
Sbjct: 230 ENKPFIIK 237


>sp|IXTPA_PYRFU|DITP/XTP pyrophosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DQPFIIKD 9
D+PFII+D
Sbjct: 58 DKPFIIED 65


>sp|CCA_PYRHO|CCA-ADDING enzyme|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EDQPFIIKDP 10
ED+P I+ DP
Sbjct: 233 EDKPLIVIDP 242


>sp|BIOW_METSF|6-CARBOXYHEXANOATE--COA ligase|Methanocaldococcus sp. (strain FS406-22)

Query: 1 EDQPFIIK 8
E++PFIIK
Sbjct: 226 ENKPFIIK 233


>sp|CCA_PYRAB|CCA-ADDING enzyme|Pyrococcus abyssi (strain GE5 /

Query: 1 EDQPFIIKDP 10
ED+P I+ DP
Sbjct: 232 EDKPIIVIDP 241


>sp|NAC_PYRHO|NASCENT polypeptide-associated complex protein|Pyrococcus horikoshii

Query: 1 EDQPFIIKDP 10
ED+ IIK+P
Sbjct: 35 EDREIIIKEP 44


>sp|Y1608_METJA|UNCHARACTERIZED protein MJ1608|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDQPFIIKD 9
ED+ F++KD
Sbjct: 53 EDKIFVLKD 61


>sp|NAC_PYRFU|NASCENT polypeptide-associated complex protein|Pyrococcus furiosus

Query: 1 EDQPFIIKDP 10
ED+ IIK+P
Sbjct: 32 EDREIIIKNP 41


>sp|DCDB_METST|DCTP deaminase, dUMP-forming|Methanosphaera stadtmanae (strain ATCC

Query: 1 EDQPFII 7
ED+PFII
Sbjct: 72 EDKPFII 78


>sp|MTXH_METMA|PUTATIVE methyltransferase mtx subunit H|Methanosarcina mazei (strain ATCC

Query: 2 DQPFIIKDP 10
D PF+I P
Sbjct: 96 DSPFLIDSP 104


>sp|SYY1_PYRAE|TYROSINE--TRNA ligase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PFIIKDP 10
PFIIK P
Sbjct: 300 PFIIKRP 306


>sp|CCA_AERPE|CCA-ADDING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 2 DQPFIIKDP 10
D P I+ DP
Sbjct: 238 DSPIIVPDP 246


>sp|GCK_PICTO|GLYCERATE 2-kinase|Picrophilus torridus (strain ATCC 700027

Query: 3 QPFIIKD 9
+PFI+KD
Sbjct: 67 RPFILKD 73


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QPFIIKDP 10
+PF +KDP
Sbjct: 162 EPFELKDP 169


>sp|BIOW_META3|6-CARBOXYHEXANOATE--COA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EDQPFIIK 8
E++P+IIK
Sbjct: 229 ENKPYIIK 236


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 1 EDQPFIIKD 9
+D PF++KD
Sbjct: 741 KDIPFMMKD 749


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DQPFIIK 8
DQPF +K
Sbjct: 276 DQPFFLK 282


>sp|GLYA_HYPBU|SERINE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 DQPFIIKDP 10
D P IKDP
Sbjct: 358 DPPDAIKDP 366


>sp|AROC_THEKO|CHORISMATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DQPFIIKD 9
+ PF++KD
Sbjct: 255 NDPFVLKD 262


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 1 EDQPFII 7
ED+PF++
Sbjct: 690 EDEPFLV 696


>sp|IF2P_IGNH4|PROBABLE translation initiation factor IF-2|Ignicoccus hospitalis (strain

Query: 2 DQPFII 7
DQPF+I
Sbjct: 153 DQPFLI 158


>sp|DCDB_METTH|DCTP deaminase, dUMP-forming|Methanothermobacter thermautotrophicus

Query: 1 EDQPFII 7
ED PFII
Sbjct: 72 EDGPFII 78




368|SequenceR|1845|1836|NLDSPEDQPF

>sp|RS2_IGNH4|SMALL ribosomal subunit protein uS2|Ignicoccus hospitalis (strain KIN4/I

Query: 3 DSPEDQP 9
D+PEDQP
Sbjct: 193 DAPEDQP 199


>sp|Y828_METBU|UPF0210 protein Mbur_0828|Methanococcoides burtonii (strain DSM 6242

Query: 3 DSPEDQPF 10
++PED PF
Sbjct: 193 NAPEDNPF 200


>sp|Y738_METVS|UPF0210 protein Mevan_0738|Methanococcus vannielii (strain ATCC 35089

Query: 3 DSPEDQPF 10
++PED PF
Sbjct: 198 NAPEDNPF 205


>sp|Y672_METM7|UPF0210 protein MmarC7_0672|Methanococcus maripaludis (strain C7 /

Query: 3 DSPEDQPF 10
++PED PF
Sbjct: 198 NAPEDNPF 205


>sp|Y3181_METBF|UPF0210 protein Mbar_A3181|Methanosarcina barkeri (strain Fusaro /

Query: 3 DSPEDQPF 10
++PED PF
Sbjct: 193 NAPEDNPF 200


>sp|Y1691_METAC|UPF0210 protein MA_1691|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DSPEDQPF 10
++PED PF
Sbjct: 204 NAPEDNPF 211


>sp|Y1665_METJA|UPF0210 protein MJ1665|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DSPEDQPF 10
++PED PF
Sbjct: 198 NAPEDNPF 205


>sp|Y151_METM5|UPF0210 protein MmarC5_0151|Methanococcus maripaludis (strain C5 /

Query: 3 DSPEDQPF 10
++PED PF
Sbjct: 198 NAPEDNPF 205


>sp|Y1427_METMP|UPF0210 protein MMP1427|Methanococcus maripaludis (strain DSM 14266

Query: 3 DSPEDQPF 10
++PED PF
Sbjct: 198 NAPEDNPF 205


>sp|Y1412_META3|UPF0210 protein Maeo_1412|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 DSPEDQPF 10
++PED PF
Sbjct: 198 NAPEDNPF 205


>sp|Y1246_METM6|UPF0210 protein MmarC6_1246|Methanococcus maripaludis (strain C6 /

Query: 3 DSPEDQPF 10
++PED PF
Sbjct: 198 NAPEDNPF 205


>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NLDSPEDQP 9
N D+P DQP
Sbjct: 273 NNDAPADQP 281


>sp|PELO_AERPE|PROTEIN pelota homolog|Aeropyrum pernix (strain ATCC 700893

Query: 2 LDSPEDQPF 10
LDS E QPF
Sbjct: 62 LDSIEFQPF 70


>sp|CBIA_THEAC|COBYRINATE a,c-diamide synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LDSPEDQPF 10
D P D PF
Sbjct: 395 FDGPYDHPF 403


>sp|DTDA_IGNH4|D-AMINOACYL-TRNA deacylase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 LDSPEDQPF 10
L+ PED PF
Sbjct: 30 LELPEDPPF 38


>sp|Y2657_METHJ|UPF0210 protein Mhun_2657|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 DSPEDQPF 10
++P+D PF
Sbjct: 194 NAPDDNPF 201


>sp|Y2269_METMJ|UPF0210 protein Memar_2269|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 DSPEDQPF 10
++P+D PF
Sbjct: 194 NAPDDNPF 201


>sp|Y1030_METLZ|UPF0210 protein Mlab_1030|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 DSPEDQPF 10
++P+D PF
Sbjct: 194 NAPDDNPF 201


>sp|Y081_METMA|UPF0210 protein MM_0081|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DSPEDQPF 10
++P+D PF
Sbjct: 193 NAPDDNPF 200


>sp|GVPN_HALMT|GAS vesicle ATPase GvpN|Haloferax mediterranei (strain ATCC 33500

Query: 5 PEDQPF 10
PE+QPF
Sbjct: 59 PEEQPF 64


>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 DSPEDQPF 10
D P D+PF
Sbjct: 218 DKPTDKPF 225


>sp|APBC_PYRFU|IRON-SULFUR cluster carrier protein|Pyrococcus furiosus (strain ATCC 43587

Query: 5 PEDQP 9
PEDQP
Sbjct: 121 PEDQP 125


>sp|APBC_PYRAB|IRON-SULFUR cluster carrier protein|Pyrococcus abyssi (strain GE5 /

Query: 5 PEDQP 9
PEDQP
Sbjct: 121 PEDQP 125


>sp|Y1782_THEKO|UNCHARACTERIZED serpin-like protein TK1782|Thermococcus kodakarensis (strain ATCC

Query: 1 NLDSPEDQPF 10
+L SPE PF
Sbjct: 130 SLKSPEGSPF 139


>sp|APBC_PYRHO|IRON-SULFUR cluster carrier protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 PEDQP 9
PEDQP
Sbjct: 121 PEDQP 125


>sp|PCKG_PYRHO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DSPEDQPF 10
DSPED+ +
Sbjct: 45 DSPEDEEY 52


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 3 DSPEDQPF 10
DSPED+ +
Sbjct: 45 DSPEDEEY 52


>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC

Query: 3 DSPEDQPF 10
DSPED+ +
Sbjct: 48 DSPEDEGY 55


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NLDSPEDQ 8
+L+SPED+
Sbjct: 310 DLESPEDR 317




369|SequenceR|1850|1841|NGPQLNLDSP

>sp|CAS3_METJA|PUTATIVE CRISPR-associated nuclease/helicase Cas3|Methanocaldococcus

Query: 3 PQLNLDSP 10
P LN+D+P
Sbjct: 190 PTLNIDNP 197


>sp|HPPA2_METAC|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Methanosarcina acetivorans

Query: 2 GPQLNLDSP 10
G LNLD P
Sbjct: 481 GQSLNLDDP 489


>sp|Y1062_METJA|UNCHARACTERIZED protein MJ1062|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NGPQLNLDSP 10
N QLN D+P
Sbjct: 402 NVSQLNTDNP 411


>sp|NPPNK_METMP|BIFUNCTIONAL NADP phosphatase/NAD kinase|Methanococcus maripaludis (strain DSM

Query: 1 NGPQLNLD 8
NG ++NLD
Sbjct: 248 NGQEVNLD 255




370|SequenceR|1855|1846|SEKTSNGPQL

>sp|RIFK_CALMQ|RIBOFLAVIN kinase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 EKTSNGPQL 10
E+TS+GP++
Sbjct: 195 ERTSHGPEV 203


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 KTSNGPQL 10
++SNGPQ
Sbjct: 98 RSSNGPQF 105


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 KTSNGPQL 10
++SNGPQ
Sbjct: 98 RSSNGPQF 105


>sp|EF1A_METST|ELONGATION factor 1-alpha|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 SEKTSNGP 8
SEK+SN P
Sbjct: 183 SEKSSNTP 190




371|SequenceR|1865|1851|LMLRVSNTSESEKTS

>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LMLRVSNTSESEKTS 15
L +++ NT E EK+S
Sbjct: 124 LHIKIYNTEEGEKSS 138


>sp|MPTN_METAC|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LMLRVSNTSESEKTS 15
L LR++ S S KTS
Sbjct: 33 LDLRIAEVSISSKTS 47


>sp|RRP4_METST|EXOSOME complex component Rrp4|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LMLRVSNTSE 10
L+LRV+N E
Sbjct: 113 LLLRVANVDE 122


>sp|SYC_HALMA|CYSTEINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LMLRVSNTSESEK 13
+ LRV+NT EK
Sbjct: 1 MTLRVTNTLTGEK 13


>sp|KPRS_METAC|RIBOSE-PHOSPHATE pyrophosphokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LMLRVSNTSESEKTS 15
L LR+++ E+EK +
Sbjct: 37 LYLRIADEIENEKVT 51




372|SequenceR|1865|1856|LMLRVSNTSE

>sp|RRP4_METST|EXOSOME complex component Rrp4|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LMLRVSNTSE 10
L+LRV+N E
Sbjct: 113 LLLRVANVDE 122




THE END