1|SequenceR|10|1|CKLEEEMEEM
>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 KLEEEMEEM 10
K+E E+EEM
Sbjct: 629 KIEHELEEM 637
>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 KLEEEMEEM 10
K+E E+EEM
Sbjct: 629 KIEHELEEM 637
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 KLEEEMEEM 10
+LE+ MEEM
Sbjct: 6 ELEDPMEEM 14
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 KLEEEMEEM 10
+LE+ MEEM
Sbjct: 6 ELEDPMEEM 14
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 KLEEEMEEM 10
+LE+ MEEM
Sbjct: 6 ELEDPMEEM 14
>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)
Query: 2 KLEEEMEEM 10
K+E E+EEM
Sbjct: 628 KIEYELEEM 636
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 4 EEEMEEM 10
EEEM+EM
Sbjct: 705 EEEMQEM 711
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 CKLEEEM 7
CK+E+E+
Sbjct: 1449 CKIEKEL 1455
>sp|VE2_HPV53|REGULATORY protein E2|Human papillomavirus type 53
Query: 1 CKLEEEMEE 9
CK E MEE
Sbjct: 83 CKTEYNMEE 91
2|SequenceR|15|6|SGCVPCKLEE
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 GCVPCKLEE 10
GCVPC LE+
Sbjct: 225 GCVPCVLED 233
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 2 GCVPC 6
GCVPC
Sbjct: 160 GCVPC 164
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 2 GCVPC 6
GCVPC
Sbjct: 160 GCVPC 164
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 2 GCVPC 6
GCVPC
Sbjct: 160 GCVPC 164
>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)
Query: 2 GCVPCKLE 9
GCVPC E
Sbjct: 109 GCVPCVRE 116
>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)
Query: 2 GCVPCKLE 9
GCVPC E
Sbjct: 97 GCVPCVRE 104
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 2 GCVPCKLEE 10
GCVPC E+
Sbjct: 225 GCVPCVRED 233
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 GCVPCK 7
GCVPC+
Sbjct: 225 GCVPCE 230
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 2 GCVPC 6
GCVPC
Sbjct: 109 GCVPC 113
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 GCVPCK 7
GCVPC+
Sbjct: 225 GCVPCE 230
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 2 GCVPC 6
GC+PC
Sbjct: 160 GCIPC 164
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 2 GCVPC 6
GC+PC
Sbjct: 160 GCIPC 164
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 GCVPCK 7
GCVPC+
Sbjct: 225 GCVPCE 230
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 GCVPCK 7
GCVPC+
Sbjct: 225 GCVPCE 230
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 GCVPCKLE 9
GCVPC E
Sbjct: 225 GCVPCVRE 232
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 SGCVPC 6
+GCVPC
Sbjct: 224 AGCVPC 229
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 GCVPCK 7
GCVPC+
Sbjct: 225 GCVPCE 230
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 2 GCVPCKLE 9
GCVPC E
Sbjct: 225 GCVPCVRE 232
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 GCVPCK 7
GCVPC+
Sbjct: 225 GCVPCE 230
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 GCVPC 6
GCVPC
Sbjct: 225 GCVPC 229
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GCVPCKLE 9
GCVPC E
Sbjct: 225 GCVPCVRE 232
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 GCVPCKLE 9
GCVPC E
Sbjct: 225 GCVPCVRE 232
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 2 GCVPCK 7
GCVPC+
Sbjct: 225 GCVPCE 230
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 2 GCVPCK 7
GCVPC+
Sbjct: 225 GCVPCE 230
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GCVPCKLE 9
GCVPC E
Sbjct: 225 GCVPCVRE 232
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GCVPCKLE 9
GCVPC E
Sbjct: 225 GCVPCVRE 232
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GCVPCKLE 9
GCVPC E
Sbjct: 225 GCVPCVRE 232
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 2 GCVPCKLE 9
GCVPC E
Sbjct: 225 GCVPCVRE 232
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GCVPCKLE 9
GCVPC E
Sbjct: 225 GCVPCVRE 232
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GCVPCKLE 9
GCVPC E
Sbjct: 225 GCVPCVRE 232
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 GCVPC 6
GCVPC
Sbjct: 225 GCVPC 229
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 GCVPC 6
GCVPC
Sbjct: 225 GCVPC 229
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 GCVPC 6
GCVPC
Sbjct: 225 GCVPC 229
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 GCVPC 6
GCVPC
Sbjct: 225 GCVPC 229
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GCVPCKLE 9
GCVPC E
Sbjct: 225 GCVPCVRE 232
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 GCVPCKLE 9
GCVPC E
Sbjct: 225 GCVPCVRE 232
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GCVPCKLE 9
GCVPC E
Sbjct: 225 GCVPCVRE 232
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 GCVPCKLE 9
GCVPC E
Sbjct: 225 GCVPCVRE 232
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 GCVPC 6
GCVPC
Sbjct: 225 GCVPC 229
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 2 GCVPCKLE 9
GCVPC E
Sbjct: 225 GCVPCVRE 232
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 GCVPC 6
GCVPC
Sbjct: 225 GCVPC 229
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 GCVPC 6
GC+PC
Sbjct: 225 GCIPC 229
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 GCVPC 6
GC+PC
Sbjct: 225 GCIPC 229
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 2 GCVPC 6
GC PC
Sbjct: 169 GCTPC 173
>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49
Query: 2 GCVPC 6
GC PC
Sbjct: 162 GCTPC 166
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 2 GCVPC 6
GC PC
Sbjct: 160 GCTPC 164
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 2 GCVPC 6
GC PC
Sbjct: 160 GCTPC 164
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 2 GCVPC 6
GC PC
Sbjct: 160 GCTPC 164
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 2 GCVPC 6
GC PC
Sbjct: 160 GCTPC 164
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 2 GCVPC 6
GC PC
Sbjct: 160 GCTPC 164
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 2 GCVPC 6
GC PC
Sbjct: 160 GCTPC 164
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 2 GCVPC 6
GC PC
Sbjct: 160 GCTPC 164
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 2 GCVPC 6
GC PC
Sbjct: 160 GCAPC 164
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 2 GCVPC 6
GC PC
Sbjct: 162 GCAPC 166
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 2 GCVPC 6
GC PC
Sbjct: 162 GCAPC 166
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 2 GCVPC 6
GC PC
Sbjct: 160 GCAPC 164
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 2 GCVPC 6
GC PC
Sbjct: 189 GCAPC 193
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 2 GCVPC 6
GC PC
Sbjct: 162 GCAPC 166
>sp|VIF_HV2EH|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 4 VPCKLE 9
+PC+LE
Sbjct: 15 IPCRLE 20
>sp|POLG_HCVE1|GENOME polyprotein|Hepatitis C virus (isolate EC1)
Query: 2 GCVPC 6
GCVPC
Sbjct: 109 GCVPC 113
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 GCVPC 6
GC+PC
Sbjct: 225 GCLPC 229
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 GCVPC 6
GC+PC
Sbjct: 225 GCLPC 229
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 GCVPCK 7
GCV C+
Sbjct: 902 GCVECR 907
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 2 GCVPCK 7
GCV C+
Sbjct: 579 GCVECR 584
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 3 CVPCKLE 9
CVPC E
Sbjct: 290 CVPCCYE 296
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 3 CVPCKLE 9
CVPC E
Sbjct: 290 CVPCCYE 296
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 CVPCKLEE 10
C P KL+E
Sbjct: 1898 CYPPKLDE 1905
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 3 CVPCKLE 9
C P KLE
Sbjct: 884 CPPIKLE 890
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 3 CVPCKLE 9
C P KLE
Sbjct: 884 CPPIKLE 890
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 CVPCKLEE 10
C P KL+E
Sbjct: 1937 CYPPKLDE 1944
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 CVPCKLEE 10
C P KL+E
Sbjct: 1937 CYPPKLDE 1944
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 CVPCKLEE 10
C P KL+E
Sbjct: 1938 CYPPKLDE 1945
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 CVPCKLEE 10
C P KL+E
Sbjct: 1898 CYPPKLDE 1905
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 SGCVPCKLE 9
+GC C LE
Sbjct: 349 TGCTGCHLE 357
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 2 GCVPCKLE 9
CV C++E
Sbjct: 971 ACVGCRVE 978
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 GCVPCKLEE 10
GC+ LEE
Sbjct: 1774 GCIIYNLEE 1782
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 GCVPCKLEE 10
GC+ LEE
Sbjct: 1774 GCIIYNLEE 1782
3|SequenceR|20|11|PERYFSGCVP
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PERYFSGCVP 10
PER S C+P
Sbjct: 479 PERALSVCLP 488
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 ERYFSGC 8
+RYF GC
Sbjct: 2057 KRYFKGC 2063
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 ERYFSGC 8
+RYF GC
Sbjct: 2027 KRYFKGC 2033
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 ERYFSGC 8
+RYF GC
Sbjct: 2007 KRYFKGC 2013
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 ERYFSGC 8
+RYF GC
Sbjct: 2057 KRYFKGC 2063
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 ERYFSGC 8
+RYF GC
Sbjct: 2027 KRYFKGC 2033
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 ERYFSGC 8
+RYF GC
Sbjct: 2007 KRYFKGC 2013
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 4 YFSGCV 9
YF GCV
Sbjct: 465 YFGGCV 470
Query: 2 ERYFSGCV 9
+RY GC+
Sbjct: 1971 KRYERGCI 1978
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 YFSGCV 9
YF GCV
Sbjct: 465 YFGGCV 470
Query: 2 ERYFSGCV 9
+RY GC+
Sbjct: 1971 KRYERGCI 1978
>sp|PG128_VAR67|PROTEIN OPG128|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 PERYFSGC 8
P+R FS C
Sbjct: 14 PKRCFSSC 21
>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)
Query: 1 PERYF 5
PERYF
Sbjct: 34 PERYF 38
>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)
Query: 1 PERYF 5
PERYF
Sbjct: 34 PERYF 38
>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)
Query: 1 PERYF 5
PERYF
Sbjct: 31 PERYF 35
>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)
Query: 1 PERYF 5
PERYF
Sbjct: 31 PERYF 35
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 PERYFSGCVP 10
P RY S P
Sbjct: 570 PSRYLSSWTP 579
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PERYFSGCVP 10
P RY S P
Sbjct: 570 PSRYLSSWTP 579
>sp|X_HBVG3|PROTEIN X|Hepatitis B virus genotype G
Query: 2 ERYFSGCV 9
E+YF CV
Sbjct: 109 EKYFKDCV 116
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 ERYFSGCVP 10
ERY C+P
Sbjct: 186 ERYAMACLP 194
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 ERYFSGCVP 10
ERY C+P
Sbjct: 186 ERYAMACLP 194
>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate
Query: 1 PERYFS 6
P+R+FS
Sbjct: 593 PDRFFS 598
>sp|ORF23_HHV8P|PROTEIN ORF23|Human herpesvirus 8 type P
Query: 2 ERYFSGCVP 10
E+YF C P
Sbjct: 343 EKYFMMCSP 351
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 PERYFSGCV 9
P+R +GC
Sbjct: 344 PDRELTGCT 352
>sp|NS1_INCCA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/California/1978)
Query: 4 YFSGCVP 10
Y S C+P
Sbjct: 109 YLSPCIP 115
>sp|NS1_INCHY|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Hyogo/1/1983)
Query: 4 YFSGCVP 10
Y S C+P
Sbjct: 109 YLSPCIP 115
>sp|NS1_INCYA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/10/1981)
Query: 4 YFSGCVP 10
Y S C+P
Sbjct: 104 YLSPCIP 110
>sp|NS1_INCGL|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Great
Query: 4 YFSGCVP 10
Y S C+P
Sbjct: 104 YLSPCIP 110
>sp|NS1_INCY6|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/1964)
Query: 4 YFSGCVP 10
Y S C+P
Sbjct: 109 YLSPCIP 115
>sp|NS1_INCAA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Ann
Query: 4 YFSGCVP 10
Y S C+P
Sbjct: 109 YLSPCIP 115
>sp|NS1_INCMI|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Mississippi/1980)
Query: 4 YFSGCVP 10
Y S C+P
Sbjct: 104 YLSPCIP 110
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 ERYFSGCVP 10
E YF C P
Sbjct: 394 ESYFFNCRP 402
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 ERYFSGCVP 10
E YF C P
Sbjct: 394 ESYFFNCRP 402
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 ERYFSGCVP 10
E YF C P
Sbjct: 394 ESYFFNCRP 402
>sp|NS1_INCTA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Taylor/1233/1947)
Query: 4 YFSGCVP 10
Y S C+P
Sbjct: 104 YLSPCIP 110
>sp|NS1_INCJH|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 4 YFSGCVP 10
Y S C+P
Sbjct: 104 YLSPCIP 110
>sp|X_HBVA3|PROTEIN X|Hepatitis B virus genotype A2
Query: 2 ERYFSGCV 9
E YF CV
Sbjct: 109 EAYFKDCV 116
>sp|X_HBVA7|PROTEIN X|Hepatitis B virus genotype A2
Query: 2 ERYFSGCV 9
E YF CV
Sbjct: 109 EAYFKDCV 116
>sp|X_HBVA4|PROTEIN X|Hepatitis B virus genotype A2
Query: 2 ERYFSGCV 9
E YF CV
Sbjct: 109 EAYFKDCV 116
>sp|X_HBVB7|PROTEIN X|Hepatitis B virus genotype B1
Query: 2 ERYFSGCV 9
E YF CV
Sbjct: 109 EAYFKDCV 116
4|SequenceR|25|16|CPLIIPERYF
>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate
Query: 2 PLIIPERYF 10
PL P+R+F
Sbjct: 589 PLFYPDRFF 597
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 PLIIPERY 9
PLIIP+ Y
Sbjct: 84 PLIIPDGY 91
>sp|L_LYCVW|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain WE)
Query: 2 PLIIPERY 9
PLIIP+ Y
Sbjct: 84 PLIIPDGY 91
>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus
Query: 1 CPLIIP 6
CP IIP
Sbjct: 192 CPEIIP 197
>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 CPLIIP 6
CP IIP
Sbjct: 192 CPEIIP 197
>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)
Query: 1 CPLIIP 6
CP IIP
Sbjct: 192 CPEIIP 197
>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CPLIIP 6
CP IIP
Sbjct: 192 CPEIIP 197
>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)
Query: 1 CPLIIP 6
CP IIP
Sbjct: 192 CPEIIP 197
>sp|PG085_MONPV|METALLOENDOPEPTIDASE OPG085|Monkeypox virus (MPXV)
Query: 1 CPLIIP 6
CP IIP
Sbjct: 192 CPEIIP 197
>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)
Query: 1 CPLIIPERYF 10
CP PERYF
Sbjct: 28 CP--TPERYF 35
>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)
Query: 1 CPLIIPERYF 10
CP PERYF
Sbjct: 28 CP--TPERYF 35
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PLIIPERYF 10
P I P+ YF
Sbjct: 813 PFISPDDYF 821
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PLIIPER 8
P+++PE+
Sbjct: 830 PIVLPEK 836
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PLIIPER 8
P+++PE+
Sbjct: 831 PIVLPEK 837
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PLIIPER 8
P+++PE+
Sbjct: 830 PIVLPEK 836
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PLIIPER 8
P+++PE+
Sbjct: 836 PIVLPEK 842
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PLIIPER 8
P+++PE+
Sbjct: 830 PIVLPEK 836
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PLIIPER 8
P+++PE+
Sbjct: 834 PIVLPEK 840
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PLIIPER 8
P+++PE+
Sbjct: 830 PIVLPEK 836
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PLIIPER 8
P+++PE+
Sbjct: 842 PIVLPEK 848
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PLIIPER 8
P+++PE+
Sbjct: 830 PIVLPEK 836
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PLIIPER 8
P+++PE+
Sbjct: 842 PIVLPEK 848
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PLIIPER 8
P+++PE+
Sbjct: 842 PIVLPEK 848
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 3 LIIPERYF 10
LI+P R+F
Sbjct: 109 LIMPARFF 116
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 2 PLIIPERY 9
P I+P RY
Sbjct: 198 PNILPTRY 205
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 2 PLIIPERY 9
P I+P RY
Sbjct: 198 PNILPTRY 205
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 3 LIIPERYF 10
L++P R+F
Sbjct: 109 LVMPSRFF 116
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 3 LIIPERYF 10
L++P R+F
Sbjct: 109 LVMPSRFF 116
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 CPLIIPE 7
CP +PE
Sbjct: 1464 CPCQVPE 1470
>sp|EBNA2_EBVA8|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PLIIPERY 9
PLIIP R+
Sbjct: 191 PLIIPPRH 198
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 2 PLIIPE 7
P++IPE
Sbjct: 32 PMVIPE 37
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 CPLIIPERY 9
C L+I E Y
Sbjct: 1984 CNLVIQENY 1992
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 3 LIIPERYF 10
L++P R+F
Sbjct: 109 LVMPARFF 116
>sp|TRX1_HHV7J|TRIPLEX capsid protein 1|Human herpesvirus 7 (strain JI)
Query: 1 CPLIIPER 8
C L+ PER
Sbjct: 49 CELLGPER 56
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 2 PLIIPE 7
P++IPE
Sbjct: 32 PMVIPE 37
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 2 PLIIPERY 9
P ++P RY
Sbjct: 198 PNVLPTRY 205
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PLIIPERY 9
P ++P RY
Sbjct: 198 PNVLPTRY 205
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 2 PLIIPERY 9
P ++P RY
Sbjct: 198 PNVLPTRY 205
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 2 PLIIPERY 9
P ++P RY
Sbjct: 198 PNVLPTRY 205
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 2 PLIIPERY 9
P ++P RY
Sbjct: 198 PNVLPTRY 205
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 PLIIPERY 9
P ++P RY
Sbjct: 198 PNVLPTRY 205
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PLIIPERY 9
P ++P RY
Sbjct: 190 PNVLPTRY 197
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 3 LIIPERYF 10
L++P R+F
Sbjct: 109 LVMPARFF 116
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 3 LIIPERYF 10
L++P R+F
Sbjct: 109 LVMPARFF 116
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 3 LIIPERYF 10
L++P R+F
Sbjct: 109 LVMPARFF 116
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 3 LIIPERYF 10
L++P R+F
Sbjct: 109 LVMPARFF 116
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 3 LIIPERYF 10
L++P R+F
Sbjct: 109 LVMPARFF 116
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 3 LIIPERYF 10
L++P R+F
Sbjct: 109 LVMPARFF 116
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 3 LIIPERYF 10
L+ PE YF
Sbjct: 380 LLYPEMYF 387
5|SequenceR|30|21|CLNHSCPLII
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 4 HSCPLI 9
HSCPL+
Sbjct: 384 HSCPLL 389
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 CLNHSCPLII 10
CL+HS L+I
Sbjct: 1660 CLSHSTDLVI 1669
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 CLNHSCPLII 10
CL+HS L+I
Sbjct: 1660 CLSHSTDLVI 1669
>sp|TRX1_HHV8P|TRIPLEX capsid protein 1|Human herpesvirus 8 type P
Query: 2 LNHSCPLI 9
L+ SCP++
Sbjct: 207 LDESCPMV 214
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 LNHSCP 7
+ HSCP
Sbjct: 1176 IEHSCP 1181
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 CLNHSCPL 8
C++ CPL
Sbjct: 3363 CVDDCCPL 3370
>sp|RL13_HCMVM|MEMBRANE protein RL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CLNHSCP 7
C N +CP
Sbjct: 19 CYNQTCP 25
>sp|RP19_VAR67|DNA-DIRECTED RNA polymerase 19 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 5 SCPLII 10
SCP++I
Sbjct: 125 SCPIVI 130
>sp|RP19_VACCC|DNA-DIRECTED RNA polymerase 19 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 SCPLII 10
SCP++I
Sbjct: 125 SCPIVI 130
>sp|RP19_VACCA|DNA-DIRECTED RNA polymerase 19 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 5 SCPLII 10
SCP++I
Sbjct: 125 SCPIVI 130
>sp|RP19_MONPV|DNA-DIRECTED RNA polymerase 19 kDa|Monkeypox virus (MPXV)
Query: 5 SCPLII 10
SCP++I
Sbjct: 122 SCPIVI 127
>sp|PG096_VACCC|PROTEIN OPG096|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LNHSCPLII 10
L H CP I+
Sbjct: 29 LEHQCPAIL 37
>sp|PG096_VACCA|PROTEIN OPG096|Vaccinia virus (strain Ankara) (VACV)
Query: 2 LNHSCPLII 10
L H CP I+
Sbjct: 29 LEHQCPAIL 37
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 CLNHSCPLII 10
CL+H L+I
Sbjct: 1660 CLSHPTDLVI 1669
>sp|PG096_VARV|PROTEIN OPG096|Variola virus
Query: 2 LNHSCPLII 10
L H CP I+
Sbjct: 29 LEHQCPAIL 37
>sp|PG096_VAR67|PROTEIN OPG096|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 LNHSCPLII 10
L H CP I+
Sbjct: 29 LEHQCPAIL 37
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 CLNHSCPLI 9
C N+ CP +
Sbjct: 169 CSNYICPTV 177
>sp|HBZ_HTL1A|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 1 CLNHSCP 7
CL SCP
Sbjct: 12 CLPVSCP 18
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 4 HSCPLII 10
++CPL+I
Sbjct: 1011 NACPLLI 1017
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 4 HSCPLII 10
++CPL+I
Sbjct: 1011 NACPLLI 1017
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 4 HSCPLII 10
++CPL+I
Sbjct: 1011 NACPLLI 1017
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 4 HSCPLII 10
++CPL+I
Sbjct: 1011 NACPLLI 1017
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 4 HSCPLII 10
++CPL+I
Sbjct: 1011 NACPLLI 1017
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 2 LNHSCPLI 9
++H CPL+
Sbjct: 192 VSHKCPLV 199
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 2 LNHSCP 7
L H CP
Sbjct: 1260 LKHGCP 1265
>sp|UL126_HCMVA|UNCHARACTERIZED protein UL126|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CLNHSCPL 8
C N+S PL
Sbjct: 31 CRNNSAPL 38
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 1 CLNHSC 6
CL H C
Sbjct: 158 CLEHEC 163
>sp|PG096_MONPV|PROTEIN OPG096|Monkeypox virus (MPXV)
Query: 2 LNHSCPLII 10
L H CP I+
Sbjct: 29 LEHQCPAIL 37
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LNHSCPLII 10
+ + CPL++
Sbjct: 162 VTYECPLLV 170
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LNHSCPLII 10
+ + CPL++
Sbjct: 162 VTYKCPLLV 170
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LNHSCPLII 10
+ + CPL++
Sbjct: 162 VTYKCPLLV 170
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LNHSCPLII 10
+ + CPL++
Sbjct: 162 VTYKCPLLV 170
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LNHSCPLII 10
+ + CPL++
Sbjct: 162 VTYKCPLLV 170
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LNHSCPLI 9
+ + CPLI
Sbjct: 163 VTYKCPLI 170
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 HSCPLII 10
SCP+++
Sbjct: 2569 QSCPIVV 2575
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 HSCPLII 10
SCP+++
Sbjct: 2569 QSCPIVV 2575
>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996
Query: 1 CLNHSCPLII 10
C+N SC I+
Sbjct: 233 CMNGSCFTIM 242
>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 CLNHSCPLII 10
C+N SC I+
Sbjct: 233 CMNGSCFTIM 242
>sp|IORF_CVHN5|PROTEIN I|Human coronavirus HKU1 (isolate N5)
Query: 1 CLNHSCPLII 10
LNH P+I+
Sbjct: 195 VLNHVDPIIV 204
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 CLNHSCPLI 9
C N CP +
Sbjct: 169 CSNDICPTV 177
>sp|IORF_CVHN2|PROTEIN I|Human coronavirus HKU1 (isolate N2)
Query: 1 CLNHSCPLII 10
LNH P+I+
Sbjct: 195 VLNHVDPIIV 204
>sp|IORF_CVHN1|PROTEIN I|Human coronavirus HKU1 (isolate N1)
Query: 1 CLNHSCPLII 10
LNH P+I+
Sbjct: 195 VLNHVDPIIV 204
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 CLNHSCP 7
C+N CP
Sbjct: 568 CINGQCP 574
>sp|PG095_VARV|ENTRY-FUSION complex associated protein OPG095|Variola virus
Query: 3 NHSCPLII 10
NH C L +
Sbjct: 46 NHGCNLTV 53
>sp|PG095_VAR67|ENTRY-FUSION complex associated protein OPG095|Variola virus (isolate
Query: 3 NHSCPLII 10
NH C L +
Sbjct: 46 NHGCNLTV 53
>sp|PG095_VACCC|ENTRY-FUSION complex associated protein OPG095|Vaccinia virus (strain
Query: 3 NHSCPLII 10
NH C L +
Sbjct: 46 NHGCNLTV 53
>sp|PG095_VACCA|ENTRY-FUSION complex associated protein OPG095|Vaccinia virus (strain Ankara)
Query: 3 NHSCPLII 10
NH C L +
Sbjct: 46 NHGCNLTV 53
>sp|UL142_HCMVM|MEMBRANE glycoprotein UL142|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 NHSCPL 8
NH+C L
Sbjct: 125 NHTCDL 130
>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959
Query: 1 CLNHSCPLII 10
C+N SC I+
Sbjct: 233 CMNGSCFTIM 242
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 CLNHSCPLI 9
C N CP +
Sbjct: 169 CSNDICPTV 177
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 1 CLNHSCPLI 9
C N CP +
Sbjct: 169 CSNDICPTV 177
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 CLNHSCPLI 9
C N CP +
Sbjct: 169 CSNDICPTV 177
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 1 CLNHSCPLI 9
CL++S PL+
Sbjct: 678 CLSNSHPLL 686
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 1 CLNHSCPLI 9
CL++S PL+
Sbjct: 678 CLSNSHPLL 686
6|SequenceR|35|26|RACAQCLNHS
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 1 RACAQCL 7
R C QCL
Sbjct: 844 RQCKQCL 850
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 1 RACAQCL 7
R C QCL
Sbjct: 844 RQCKQCL 850
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 RACAQCLNH 9
R QCL H
Sbjct: 568 RCVTQCLGH 576
>sp|VEMP_MERS1|ENVELOPE small membrane protein|Middle East respiratory syndrome-related
Query: 1 RACAQCL 7
R C QC+
Sbjct: 38 RLCVQCM 44
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 ACAQC 6
+CAQC
Sbjct: 1210 SCAQC 1214
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 ACAQC 6
+CAQC
Sbjct: 1209 SCAQC 1213
>sp|VEMP_SARS|ENVELOPE small membrane protein|Severe acute respiratory syndrome
Query: 1 RACAQCLN 8
R CA C N
Sbjct: 38 RLCAYCCN 45
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 RACAQC 6
RACA C
Sbjct: 956 RACAGC 961
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 RACAQC 6
RACA C
Sbjct: 956 RACAGC 961
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 CAQCL 7
CAQC+
Sbjct: 2961 CAQCV 2965
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 CAQCL 7
CAQC+
Sbjct: 2961 CAQCV 2965
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 RACAQC 6
RACA C
Sbjct: 971 RACAGC 976
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 RACAQC 6
RACA C
Sbjct: 971 RACAGC 976
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 RACAQC 6
RACA C
Sbjct: 956 RACAGC 961
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 RACAQC 6
RACA C
Sbjct: 956 RACAGC 961
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 RACAQC 6
RACA C
Sbjct: 954 RACAGC 959
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 RACAQC 6
RACA C
Sbjct: 956 RACAGC 961
>sp|VEMP_SARS2|ENVELOPE small membrane protein|Severe acute respiratory syndrome
Query: 1 RACAQCLN 8
R CA C N
Sbjct: 38 RLCAYCCN 45
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 CAQC 6
CAQC
Sbjct: 1209 CAQC 1212
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 CAQC 6
CAQC
Sbjct: 1210 CAQC 1213
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 CAQC 6
CAQC
Sbjct: 1211 CAQC 1214
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 CAQC 6
CAQC
Sbjct: 1209 CAQC 1212
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 5 QCLNHS 10
QC++HS
Sbjct: 1230 QCVDHS 1235
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 5 QCLNHS 10
QC++HS
Sbjct: 1230 QCVDHS 1235
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 5 QCLNHS 10
QC++HS
Sbjct: 1229 QCVDHS 1234
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 5 QCLNH 9
QCL+H
Sbjct: 404 QCLSH 408
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 QCLNH 9
QCL+H
Sbjct: 404 QCLSH 408
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RACAQCLN 8
R C CLN
Sbjct: 375 RQCGHCLN 382
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RACAQCLN 8
R C CLN
Sbjct: 375 RQCGHCLN 382
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 CAQCLN 8
CA C N
Sbjct: 305 CATCFN 310
>sp|VE2_HPV26|REGULATORY protein E2|Human papillomavirus type 26
Query: 5 QCLNH 9
QC+NH
Sbjct: 52 QCINH 56
>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)
Query: 1 RACAQCLNH 9
R C CL H
Sbjct: 259 RVCLLCLLH 267
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 CAQCLN 8
CA C N
Sbjct: 305 CATCFN 310
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 CAQCLN 8
CA C N
Sbjct: 305 CATCFN 310
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 2 ACAQCLNHS 10
A A C+ HS
Sbjct: 334 AVADCIGHS 342
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 2 ACAQCLNHS 10
AC + L HS
Sbjct: 482 ACLRALGHS 490
>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)
Query: 1 RACAQC 6
R C QC
Sbjct: 274 RVCEQC 279
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 6 CLNH 9
CLNH
Sbjct: 603 CLNH 606
>sp|V_MEASI|NON-STRUCTURAL protein V|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 RACAQC 6
R C QC
Sbjct: 274 RVCEQC 279
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 QCLNHS 10
QC NH+
Sbjct: 979 QCFNHN 984
>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)
Query: 1 RACAQC 6
R C QC
Sbjct: 274 RVCEQC 279
>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 RACAQC 6
R C QC
Sbjct: 274 RVCEQC 279
7|SequenceR|40|31|QVLINRACAQ
>sp|VP35_EBORR|POLYMERASE cofactor VP35|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 INRACAQ 10
+NR+CA+
Sbjct: 120 LNRSCAE 126
>sp|VP35_EBORE|POLYMERASE cofactor VP35|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 INRACAQ 10
+NR+CA+
Sbjct: 120 LNRSCAE 126
>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 INRACAQ 10
+NR+CA+
Sbjct: 120 LNRSCAE 126
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QVLINRACA 9
+ L+N ACA
Sbjct: 729 EALLNAACA 737
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 3 LINRACAQ 10
+NR C Q
Sbjct: 146 FVNRQCGQ 153
>sp|ORF27_HHV8P|PROTEIN ORF27|Human herpesvirus 8 type P
Query: 2 VLINRACA 9
V++N +CA
Sbjct: 178 VMVNTSCA 185
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 LINRAC 8
LINR C
Sbjct: 1956 LINRLC 1961
>sp|VP35_EBOZ5|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 4 INRACAQ 10
+NR CA+
Sbjct: 131 LNRVCAE 137
>sp|VP35_EBOZM|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 4 INRACAQ 10
+NR CA+
Sbjct: 131 LNRVCAE 137
8|SequenceR|45|36|ESEPTQVLIN
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 1 ESEPTQVLIN 10
E PT ++N
Sbjct: 79 EDHPTSCMVN 88
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 2 SEPTQVLIN 10
S PT ++IN
Sbjct: 1662 SHPTDLVIN 1670
9|SequenceR|50|41|HSQPSESEPT
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 2 SQPSESEP 9
SQ SESEP
Sbjct: 727 SQESESEP 734
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 SQPSESE 8
SQP+ESE
Sbjct: 1119 SQPTESE 1125
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 HSQPSESE 8
HS P ESE
Sbjct: 539 HSAPYESE 546
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 1 HSQPSESE 8
HS P ESE
Sbjct: 673 HSAPYESE 680
10|SequenceR|55|46|SGAARHSQPS
>sp|UL63_HCMVA|UNCHARACTERIZED protein UL63|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SGAARHSQP 9
+GAAR S+P
Sbjct: 31 AGAARTSRP 39
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 5 RHSQPS 10
RH+QPS
Sbjct: 36 RHNQPS 41
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 SGAARHSQP 9
SG+ R SQP
Sbjct: 1498 SGSERGSQP 1506
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 5 RHSQP 9
RHSQP
Sbjct: 1587 RHSQP 1591
>sp|NEF_HV2RO|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 SGAARHSQP 9
SG+ +HS+P
Sbjct: 4 SGSKKHSRP 12
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate
Query: 5 RHSQPS 10
RH+QP+
Sbjct: 36 RHNQPN 41
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 5 RHSQP 9
RHSQP
Sbjct: 1587 RHSQP 1591
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 5 RHSQP 9
RHSQP
Sbjct: 1587 RHSQP 1591
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 5 RHSQP 9
RHSQP
Sbjct: 1587 RHSQP 1591
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 5 RHSQP 9
RHSQP
Sbjct: 1587 RHSQP 1591
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 2 GAARHSQPS 10
GA+R ++PS
Sbjct: 215 GASRPTKPS 223
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 GAARHSQ 8
GAARH +
Sbjct: 1425 GAARHQK 1431
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 GAARHSQ 8
GAARH +
Sbjct: 1426 GAARHQK 1432
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 GAARHSQ 8
GAARH +
Sbjct: 1425 GAARHQK 1431
11|SequenceR|60|51|YDSVGSGAAR
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 1 YDSVGSGAAR 10
YD VG+G R
Sbjct: 633 YDYVGTGIIR 642
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 1 YDSVGSGA 8
Y+SVGS A
Sbjct: 245 YNSVGSKA 252
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 YDSVGSGA 8
Y+SVGS A
Sbjct: 245 YNSVGSKA 252
>sp|US06_HCMVT|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 YDSVGSGAAR 10
Y+S G G R
Sbjct: 171 YESTGRGIRR 180
>sp|US06_HCMVM|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 1 YDSVGSGAAR 10
Y+S G G R
Sbjct: 170 YESTGRGIRR 179
>sp|US06_HCMVA|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YDSVGSGAAR 10
Y+S G G R
Sbjct: 171 YESTGRGIRR 180
12|SequenceR|65|56|LDLYDYDSVG
>sp|MATRX_VSNJO|MATRIX protein|Vesicular stomatitis New Jersey virus
Query: 1 LDLYDYDSV 9
+DLYD DS+
Sbjct: 51 MDLYDKDSL 59
>sp|VE7_HPV70|PROTEIN E7|Human papillomavirus type 70
Query: 1 LDLYDYDSV 9
LDLY Y+ +
Sbjct: 13 LDLYPYNEI 21
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
Query: 1 LDLYDYDS 8
+DL YDS
Sbjct: 388 IDLKQYDS 395
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 DLYDY 6
DLYDY
Sbjct: 101 DLYDY 105
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 DLYDY 6
DLYDY
Sbjct: 104 DLYDY 108
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 2 DLYDY 6
DLYDY
Sbjct: 101 DLYDY 105
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 DLYDY 6
DLYDY
Sbjct: 85 DLYDY 89
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I97A1|PROTEIN PA-X|Influenza A virus (strain A/Hong
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I97A0|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I96A3|PROTEIN PA-X|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I96A2|PROTEIN PA-X|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I96A0|PROTEIN PA-X|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I93A0|PROTEIN PA-X|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I85A3|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I83A8|PROTEIN PA-X|Influenza A virus (strain A/Hong
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I83A1|PROTEIN PA-X|Influenza A virus (strain A/Chile/1/1983
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I82A4|PROTEIN PA-X|Influenza A virus (strain A/Swine/Hong
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I80AA|PROTEIN PA-X|Influenza A virus (strain A/India/6263/1980
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I80A4|PROTEIN PA-X|Influenza A virus (strain A/Memphis/4/1980
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I80A2|PROTEIN PA-X|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I78A9|PROTEIN PA-X|Influenza A virus (strain A/Swine/Hong
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I78A8|PROTEIN PA-X|Influenza A virus (strain A/Memphis/18/1978
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I78A7|PROTEIN PA-X|Influenza A virus (strain A/Memphis/2/1978
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I78A3|PROTEIN PA-X|Influenza A virus (strain A/Mallard/New
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I77AD|PROTEIN PA-X|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I77AB|PROTEIN PA-X|Influenza A virus (strain A/USSR/90/1977
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I77AA|PROTEIN PA-X|Influenza A virus (strain A/Brazil/11/1978
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I77A4|PROTEIN PA-X|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I76A6|PROTEIN PA-X|Influenza A virus (strain A/Memphis/110/1976
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I75A0|PROTEIN PA-X|Influenza A virus (strain A/Beijing/39/1975
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I73A5|PROTEIN PA-X|Influenza A virus (strain A/Port
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I73A4|PROTEIN PA-X|Influenza A virus (strain A/Equine/London/1416/1973
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I72A4|PROTEIN PA-X|Influenza A virus (strain A/Memphis/101/1972
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I72A3|PROTEIN PA-X|Influenza A virus (strain A/Memphis/102/1972
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I72A2|PROTEIN PA-X|Influenza A virus (strain A/Udorn/307/1972
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I71A1|PROTEIN PA-X|Influenza A virus (strain A/Memphis/1/1971
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I70A0|PROTEIN PA-X|Influenza A virus (strain A/Qu/7/1970
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I69A0|PROTEIN PA-X|Influenza A virus (strain A/England/878/1969
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I68A6|PROTEIN PA-X|Influenza A virus (strain A/Northern
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I68A5|PROTEIN PA-X|Influenza A virus (strain A/Korea/426/1968
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I68A4|PROTEIN PA-X|Influenza A virus (strain A/Hong
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I67A2|PROTEIN PA-X|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I67A0|PROTEIN PA-X|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I61A1|PROTEIN PA-X|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I60A0|PROTEIN PA-X|Influenza A virus (strain A/Ann
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I59A0|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I57A5|PROTEIN PA-X|Influenza A virus (strain A/Singapore/1/1957
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I57A3|PROTEIN PA-X|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I57A2|PROTEIN PA-X|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I57A1|PROTEIN PA-X|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I57A0|PROTEIN PA-X|Influenza A virus (strain A/Japan/305/1957
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I54A2|PROTEIN PA-X|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I51A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I47A0|PROTEIN PA-X|Influenza A virus (strain A/Fort
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I45A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I43A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I40A0|PROTEIN PA-X|Influenza A virus (strain A/Hickox/1940
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I36A0|PROTEIN PA-X|Influenza A virus (strain A/Henry/1936
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I35A3|PROTEIN PA-X|Influenza A virus (strain A/USA:Phila/1935
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I34A1|PROTEIN PA-X|Influenza A virus (strain A/Puerto
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I33A0|PROTEIN PA-X|Influenza A virus (strain A/Wilson-Smith/1933
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I30A0|PROTEIN PA-X|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I18A0|PROTEIN PA-X|Influenza A virus (strain A/Brevig
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I09A0|PROTEIN PA-X|Influenza A virus (strain swl
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I07A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I06A0|PROTEIN PA-X|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I05A1|PROTEIN PA-X|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I04A1|PROTEIN PA-X|Influenza A virus (strain A/Vietnam/1203/2004
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I03A2|PROTEIN PA-X|Influenza A virus (strain A/wyoming/03/2003
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I02A6|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I02A5|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I02A4|PROTEIN PA-X|Influenza A virus (strain A/Silky
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I02A2|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I02A1|PROTEIN PA-X|Influenza A virus (strain A/Guinea
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I02A0|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I01A3|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I01A0|PROTEIN PA-X|Influenza A virus (strain A/Silky
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I00A1|PROTEIN PA-X|Influenza A virus (strain A/New
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I00A0|PROTEIN PA-X|Influenza A virus (strain A/Duck/Hong
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|PAX_I000X|PROTEIN PA-X|Influenza A virus (strain A/X-31
Query: 2 DLYDY 6
DLYDY
Sbjct: 108 DLYDY 112
>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)
Query: 1 LDLYDYD 7
+DL DYD
Sbjct: 1 MDLIDYD 7
>sp|VE2_HPV34|REGULATORY protein E2|Human papillomavirus type 34
Query: 1 LDLYDYDSV 9
L+LY+ DS+
Sbjct: 17 LELYERDSI 25
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 DLYDYDSVG 10
D +D+ SVG
Sbjct: 710 DAWDFGSVG 718
>sp|PG148_VARV|DNA polymerase processivity factor component|Variola virus
Query: 3 LYDYDSVG 10
LYDYD G
Sbjct: 275 LYDYDGNG 282
>sp|PG148_VAR67|DNA polymerase processivity factor component|Variola virus (isolate
Query: 3 LYDYDSVG 10
LYDYD G
Sbjct: 275 LYDYDGNG 282
>sp|PG148_MONPV|DNA polymerase processivity factor component|Monkeypox virus (MPXV)
Query: 3 LYDYDSVG 10
LYDYD G
Sbjct: 275 LYDYDGNG 282
>sp|PG148_VACCC|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 3 LYDYDSVG 10
LYDYD G
Sbjct: 275 LYDYDGNG 282
>sp|A20_VACCA|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 3 LYDYDSVG 10
LYDYD G
Sbjct: 275 LYDYDGNG 282
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LDLYDYDSVG 10
LDL D+D G
Sbjct: 409 LDLADFDDHG 418
>sp|VE7_HPV1|PROTEIN E7|Human papillomavirus type 1 (Human
Query: 1 LDLYDYDSVG 10
LDLY Y+ V
Sbjct: 22 LDLYCYEEVP 31
>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41
Query: 1 LDLYDYDSV 9
L LY+ DSV
Sbjct: 19 LTLYEKDSV 27
>sp|ORF10_HHV8P|PROTEIN ORF10|Human herpesvirus 8 type P
Query: 1 LDLYDYDSVG 10
LDL ++S+G
Sbjct: 192 LDLLTFESMG 201
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 LDLYDYDS 8
LDL DY S
Sbjct: 2079 LDLPDYSS 2086
>sp|TRX1_HCMVM|TRIPLEX capsid protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LYDYD 7
+YDYD
Sbjct: 190 VYDYD 194
>sp|TRX1_HCMVA|TRIPLEX capsid protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LYDYD 7
+YDYD
Sbjct: 190 VYDYD 194
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 LDLYDYDS 8
LDL DY S
Sbjct: 2079 LDLPDYPS 2086
13|SequenceR|70|61|LSMKDLDLYD
>sp|MATRX_VSNJO|MATRIX protein|Vesicular stomatitis New Jersey virus
Query: 1 LSMKDLDLYD 10
M+D+DLYD
Sbjct: 46 FGMEDMDLYD 55
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 MKDLDLYD 10
M D DLYD
Sbjct: 5900 MSDRDLYD 5907
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 MKDLDLYD 10
M D DLYD
Sbjct: 5877 MSDRDLYD 5884
>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)
Query: 2 SMKDLDLYD 10
S+ D+D YD
Sbjct: 157 SVADMDAYD 165
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 LSMKDLDL 8
+SMKD+DL
Sbjct: 340 MSMKDVDL 347
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 1 LSMKDLDLYD 10
+ D DLYD
Sbjct: 192 FGLPDADLYD 201
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 LSMKDLDL 8
LSMK +DL
Sbjct: 975 LSMKGVDL 982
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 LSMKDLDL 8
LSMK +DL
Sbjct: 975 LSMKGVDL 982
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 1 LSMKDLDLYD 10
+ D DLYD
Sbjct: 98 FGLPDADLYD 107
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 4 KDLDLYD 10
KDLDL++
Sbjct: 1446 KDLDLFN 1452
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 4 KDLDLYD 10
KDLDL++
Sbjct: 1446 KDLDLFN 1452
>sp|VE7_HPV32|PROTEIN E7|Human papillomavirus type 32
Query: 2 SMKDLDLYD 10
++KD+ LYD
Sbjct: 7 TLKDIILYD 15
14|SequenceR|75|66|DAESYLSMKD
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 3 ESYLSMKD 10
+SY+++KD
Sbjct: 1279 QSYINLKD 1286
>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 AESYLSMKD 10
AESYL D
Sbjct: 229 AESYLKASD 237
>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 AESYLSMKD 10
AESYL D
Sbjct: 229 AESYLKASD 237
>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 AESYLSMKD 10
AESYL D
Sbjct: 229 AESYLKASD 237
15|SequenceR|80|71|SGYGSDAESY
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 SGYGSDAESY 10
SG G+D E+Y
Sbjct: 388 SGPGADCEAY 397
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 GSDAESY 10
GSD ESY
Sbjct: 2379 GSDVESY 2385
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 GSDAESY 10
GS+AESY
Sbjct: 2389 GSEAESY 2395
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 GSDAESY 10
GSD ESY
Sbjct: 2379 GSDVESY 2385
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 GSDAESY 10
GSD ESY
Sbjct: 2379 GSDVESY 2385
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 GSDAESY 10
GSD ESY
Sbjct: 2379 GSDVESY 2385
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 GSDAESY 10
GSD ESY
Sbjct: 2379 GSDVESY 2385
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 5 SDAESY 10
SDAESY
Sbjct: 2380 SDAESY 2385
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 SDAESY 10
SDAESY
Sbjct: 2380 SDAESY 2385
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 SGYGSDAESY 10
+G G+D E+Y
Sbjct: 393 AGPGADCEAY 402
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 SGYGSDAESY 10
+G G+D E+Y
Sbjct: 393 AGPGADCEAY 402
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 1 SGYGSDAESY 10
+G G+D E+Y
Sbjct: 393 AGPGADCEAY 402
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 1 SGYGSDAESY 10
+G G+D E+Y
Sbjct: 393 AGPGADCEAY 402
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SGYGSDAE 8
+ YGSD E
Sbjct: 621 TSYGSDVE 628
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SGYGSDAE 8
+ YGSD E
Sbjct: 620 TSYGSDVE 627
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 YGSDAESY 10
YG D E Y
Sbjct: 39 YGDDPERY 46
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 YGSDAESY 10
YG D E Y
Sbjct: 39 YGDDPERY 46
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 SGYGSD 6
+GYGSD
Sbjct: 2362 TGYGSD 2367
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 YGSDAESY 10
YG D E+Y
Sbjct: 495 YGHDNEAY 502
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 YGSDAES 9
YG+DA S
Sbjct: 25 YGADAAS 31
>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 2 GYGSDAESY 10
G G+D E Y
Sbjct: 600 GNGADLEKY 608
>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 2 GYGSDAESY 10
G G+D E Y
Sbjct: 600 GNGADLEKY 608
>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 2 GYGSDAESY 10
G G+D E Y
Sbjct: 600 GNGADLEKY 608
>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GYGSDAESY 10
G G+D E Y
Sbjct: 600 GNGADLEKY 608
>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 2 GYGSDAESY 10
G G+D E Y
Sbjct: 600 GNGADLEKY 608
>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus
Query: 2 GYGSDAESY 10
G G+D E Y
Sbjct: 600 GNGADLEKY 608
>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)
Query: 2 GYGSDAESY 10
G G+D E Y
Sbjct: 601 GNGADLEKY 609
16|SequenceR|85|76|AFGGYSGYGS
>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)
Query: 1 AFGGYSGYG 9
+FGG GYG
Sbjct: 155 SFGGSGGYG 163
>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)
Query: 1 AFGGYSGYG 9
+FGG GYG
Sbjct: 155 SFGGSGGYG 163
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 5 YSGYG 9
YSGYG
Sbjct: 1449 YSGYG 1453
>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV
Query: 2 FGGYSGY 8
F GYSG+
Sbjct: 640 FEGYSGH 646
>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate
Query: 2 FGGYSGY 8
F GYSG+
Sbjct: 640 FEGYSGH 646
>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)
Query: 1 AFGGY 5
AFGGY
Sbjct: 6 AFGGY 10
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 FGGYSGYG 9
+ GYSG+G
Sbjct: 525 YDGYSGHG 532
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 FGGYSGYG 9
+ GYSG+G
Sbjct: 525 YDGYSGHG 532
>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)
Query: 1 AFGGY 5
AFGGY
Sbjct: 6 AFGGY 10
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 1 AFGGYSG 7
AFG Y+G
Sbjct: 653 AFGPYAG 659
>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)
Query: 1 AFGGY 5
AFGGY
Sbjct: 8 AFGGY 12
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 2 FGGYSGY 8
+G Y+GY
Sbjct: 474 YGHYAGY 480
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 GGYSGYG 9
GY G+G
Sbjct: 445 AGYGGFG 451
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 2 FGGYSGYG 9
F GY G+G
Sbjct: 135 FDGYVGWG 142
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 FGGYSGYG 9
+ GY G+G
Sbjct: 137 YNGYKGWG 144
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 GGYSGYG 9
GY G+G
Sbjct: 445 AGYGGFG 451
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 GGYSGYG 9
G YS YG
Sbjct: 150 GSYSQYG 156
>sp|US09_HCMVM|MEMBRANE glycoprotein US9|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AFGGYSGY 8
FG SGY
Sbjct: 65 GFGDVSGY 72
>sp|US09_HCMVA|UNIQUE short US9 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 AFGGYSGY 8
FG SGY
Sbjct: 65 GFGDVSGY 72
>sp|ORF1_HPBVH|UNCHARACTERIZED ORF1 protein|Human picobirnavirus (strain
Query: 1 AFGGYSGYGS 10
AFG GY +
Sbjct: 160 AFGSLLGYST 169
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 5 YSGYGS 10
+SGYG+
Sbjct: 443 FSGYGN 448
17|SequenceR|90|81|TTPASAFGGY
>sp|VP35_MABVP|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 TTPASAFGGY 10
T PA+AF Y
Sbjct: 142 TAPAAAFDAY 151
>sp|VP35_MABVR|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 TTPASAFGGY 10
T PA+AF Y
Sbjct: 142 TAPAAAFDAY 151
>sp|VP35_MABVO|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 TTPASAFGGY 10
T PA+AF Y
Sbjct: 142 TAPAAAFDAY 151
>sp|VP35_MABVM|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 TTPASAFGGY 10
T PA+AF Y
Sbjct: 142 TAPAAAFDAY 151
>sp|VP35_MABVA|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 TTPASAFGGY 10
T PA+AF Y
Sbjct: 142 TAPAAAFDAY 151
>sp|VE5_HPV18|PROBABLE protein E5|Human papillomavirus type 18
Query: 1 TTPASAFGGY 10
T+PA+AF Y
Sbjct: 44 TSPATAFTVY 53
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 3 PASAFGGY 10
PA+A+ GY
Sbjct: 2304 PATAWAGY 2311
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 TPASAFGG 9
TP + FGG
Sbjct: 65 TPITNFGG 72
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 TPASAFGG 9
TP + FGG
Sbjct: 65 TPITNFGG 72
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 2 TPASAFGGY 10
TPA+ +G Y
Sbjct: 323 TPATTWGSY 331
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 TTPASAFG 8
T P +AFG
Sbjct: 4358 TIPGTAFG 4365
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TTPASAF 7
TTPASA+
Sbjct: 186 TTPASAY 192
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 1 TTPASAF 7
TTPASA+
Sbjct: 186 TTPASAY 192
>sp|NS1_HRSV|NON-STRUCTURAL protein 1|Human respiratory syncytial virus
Query: 1 TTPASAFGGY 10
T PA GGY
Sbjct: 79 TMPALQNGGY 88
>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 3 PASAFGG 9
PA FGG
Sbjct: 51 PACMFGG 57
>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 3 PASAFGG 9
PA FGG
Sbjct: 53 PACMFGG 59
>sp|TEG3_HHV11|TEGUMENT protein UL14|Human herpesvirus 1 (strain 17)
Query: 1 TTPASAFG 8
T PASA G
Sbjct: 203 TDPASASG 210
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 TTPASAFGG 9
+TP +A GG
Sbjct: 661 STPPAALGG 669
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 TTPASAFGG 9
+TP +A GG
Sbjct: 661 STPPAALGG 669
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 2 TPASAFGGY 10
TP FG Y
Sbjct: 138 TPMLEFGSY 146
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 TTPASAF 7
TTPASA
Sbjct: 186 TTPASAL 192
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 TTPASAF 7
TTPASA
Sbjct: 186 TTPASAL 192
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 TTPASAF 7
TTPASA
Sbjct: 186 TTPASAL 192
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 TTPASAFG 8
T PASA G
Sbjct: 186 TVPASAVG 193
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 TTPASAFGGY 10
T P FGG+
Sbjct: 791 TPPIKDFGGF 800
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 TTPASAF 7
TTPASA
Sbjct: 186 TTPASAI 192
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 TTPASAFGG 9
TTP S GG
Sbjct: 2780 TTPFSLKGG 2788
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 TTPASAFGG 9
TTP S GG
Sbjct: 2800 TTPFSLKGG 2808
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 TTPASAFGG 9
TTP S GG
Sbjct: 2830 TTPFSLKGG 2838
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 TTPASAFGG 9
TTP S GG
Sbjct: 2780 TTPFSLKGG 2788
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 TTPASAFGG 9
TTP S GG
Sbjct: 2800 TTPFSLKGG 2808
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 TTPASAFGG 9
TTP S GG
Sbjct: 2830 TTPFSLKGG 2838
18|SequenceR|95|86|SKQCPTTPAS
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 SKQCPTT 7
SK+CPT+
Sbjct: 926 SKECPTS 932
>sp|VE6_HPV66|PROTEIN E6|Human papillomavirus 66
Query: 3 QCPTTP 8
QCP TP
Sbjct: 110 QCPLTP 115
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 2 KQCPTTP 8
++CPT P
Sbjct: 131 RRCPTRP 137
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 2 KQCPTTP 8
++CPT P
Sbjct: 131 RRCPTRP 137
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 SKQCPT 6
+K+CPT
Sbjct: 931 TKECPT 936
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 SKQCPT 6
+K+CPT
Sbjct: 929 TKECPT 934
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 2 KQCPTTP 8
++CPT P
Sbjct: 130 RRCPTRP 136
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 SKQCPT 6
+K+CPT
Sbjct: 931 TKECPT 936
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 4 CPTTP 8
CPT P
Sbjct: 84 CPTLP 88
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 4 CPTTP 8
CPT P
Sbjct: 80 CPTLP 84
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn
Query: 4 CPTTP 8
CPT P
Sbjct: 80 CPTLP 84
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 4 CPTTP 8
CPT P
Sbjct: 80 CPTLP 84
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 2 KQCPTTP 8
++CPT P
Sbjct: 131 RRCPTRP 137
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 SKQCPT 6
+K+CPT
Sbjct: 926 TKECPT 931
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 CPTTP 8
CPT P
Sbjct: 421 CPTLP 425
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CPTTPA 9
CPT+P+
Sbjct: 139 CPTSPS 144
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 4 CPTTP 8
CPT P
Sbjct: 421 CPTLP 425
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 4 CPTTP 8
CPT P
Sbjct: 421 CPTLP 425
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 CPTTPA 9
CPT+P+
Sbjct: 139 CPTSPS 144
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CPTTPA 9
CPT+P+
Sbjct: 139 CPTSPS 144
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 5 PTTPAS 10
PTTPAS
Sbjct: 63 PTTPAS 68
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 2 KQCPTTP 8
++CPT P
Sbjct: 126 RRCPTRP 132
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 2 KQCPTTP 8
++CPT P
Sbjct: 126 RRCPTRP 132
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 KQCPTTPAS 10
+QC PAS
Sbjct: 492 RQCGIVPAS 500
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 PTTPAS 10
P TPAS
Sbjct: 1922 PVTPAS 1927
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 PTTPAS 10
P TPAS
Sbjct: 1922 PVTPAS 1927
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 PTTPAS 10
P TPAS
Sbjct: 1922 PVTPAS 1927
>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)
Query: 2 KQCPTTPA 9
K+CPT A
Sbjct: 463 KRCPTQNA 470
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 CPTTPAS 10
C TTPAS
Sbjct: 184 CLTTPAS 190
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 PTTPAS 10
P TPAS
Sbjct: 1922 PVTPAS 1927
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 PTTPAS 10
P TPAS
Sbjct: 1922 PVTPAS 1927
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 4 CPTTPAS 10
C TTPAS
Sbjct: 184 CLTTPAS 190
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 4 CPTTPAS 10
C TTPAS
Sbjct: 184 CLTTPAS 190
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 CPTTPAS 10
C TTPAS
Sbjct: 184 CLTTPAS 190
>sp|PAX_I47A0|PROTEIN PA-X|Influenza A virus (strain A/Fort
Query: 2 KQCPTTP 8
+QC T+P
Sbjct: 209 EQCATSP 215
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 4 CPTTPAS 10
C TTPAS
Sbjct: 184 CLTTPAS 190
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 CPTTPAS 10
C TTPAS
Sbjct: 184 CLTTPAS 190
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 CPTTPAS 10
C TTPAS
Sbjct: 184 CLTTPAS 190
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 1 SKQCPTTPA 9
KQC TP
Sbjct: 168 GKQCTNTPV 176
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 1 SKQCPTTPA 9
KQC TP
Sbjct: 168 GKQCTNTPV 176
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 4 CPTTPAS 10
C TTPAS
Sbjct: 184 CLTTPAS 190
19|SequenceR|100|91|RVGNPSKQCP
>sp|PG062_VARV|PHOSPHOPROTEIN OPG062|Variola virus
Query: 1 RVGNPSKQCP 10
R+ NP KQ P
Sbjct: 68 RMNNPGKQVP 77
>sp|PG062_VAR67|PHOSPHOPROTEIN OPG062|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 RVGNPSKQCP 10
R+ NP KQ P
Sbjct: 68 RMNNPGKQVP 77
>sp|PG062_MONPV|PHOSPHOPROTEIN OPG062|Monkeypox virus (MPXV)
Query: 1 RVGNPSKQCP 10
R+ NP KQ P
Sbjct: 68 RMNNPGKQVP 77
>sp|PG062_VACCT|PHOSPHOPROTEIN OPG062|Vaccinia virus (strain Tian Tan)
Query: 1 RVGNPSKQCP 10
R+ NP KQ P
Sbjct: 68 RMNNPGKQVP 77
>sp|PG062_VACCC|PHOSPHOPROTEIN OPG062|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RVGNPSKQCP 10
R+ NP KQ P
Sbjct: 68 RMNNPGKQVP 77
>sp|NSP1B_ROTGI|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate RVB/Rat/United
Query: 1 RVGNPSKQCP 10
+ NP K+CP
Sbjct: 42 KYDNPLKECP 51
>sp|TEG7_HHV8P|TEGUMENT protein ORF55|Human herpesvirus 8 type P
Query: 1 RVGNPSKQCP 10
R+G+P + CP
Sbjct: 25 RLGDPLEGCP 34
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 1 RVGNPSKQ 8
RVGNP+ +
Sbjct: 297 RVGNPTDE 304
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 RVGNPSKQC 9
+VG+ +KQC
Sbjct: 395 KVGHTAKQC 403
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RVGNPSKQC 9
+VG+ +KQC
Sbjct: 395 KVGHTAKQC 403
>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 PSKQCP 10
P K CP
Sbjct: 269 PPKDCP 274
>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 PSKQCP 10
P K CP
Sbjct: 269 PPKDCP 274
>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 PSKQCP 10
P K CP
Sbjct: 269 PPKDCP 274
>sp|ST_POVJC|SMALL t antigen|JC polyomavirus (JCPyV) (JCV)
Query: 4 NPSKQCP 10
NPS CP
Sbjct: 104 NPSVHCP 110
>sp|GCVK_HHV7J|PROBABLE ganciclovir kinase|Human herpesvirus 7 (strain JI)
Query: 3 GNPSKQC 9
GNP + C
Sbjct: 382 GNPVRHC 388
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 4 NPSKQC 9
NP+ QC
Sbjct: 351 NPNSQC 356
>sp|PG128_VACCC|PROTEIN OPG128|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VGNPSKQC 9
V NP K+C
Sbjct: 10 VLNPPKRC 17
>sp|PG128_MONPV|PROTEIN OPG128|Monkeypox virus (MPXV)
Query: 2 VGNPSKQC 9
V NP K+C
Sbjct: 10 VLNPPKRC 17
>sp|PG128_VAR67|PROTEIN OPG128|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 VGNPSKQC 9
V NP K+C
Sbjct: 10 VLNPPKRC 17
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 RVGNPSKQCP 10
R GNP Q P
Sbjct: 1204 RGGNPQHQMP 1213
>sp|MATRX_PI3H4|MATRIX protein|Human parainfluenza 3 virus (strain
Query: 1 RVGNPSKQ 8
++GNP K
Sbjct: 43 KIGNPPKH 50
>sp|ORF32_VZVO|PHOSPHOPROTEIN 32|Varicella-zoster virus (strain Oka vaccine)
Query: 4 NPSKQC 9
+PSKQC
Sbjct: 18 HPSKQC 23
>sp|ORF32_VZVD|PHOSPHOPROTEIN 32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 NPSKQC 9
+PSKQC
Sbjct: 18 HPSKQC 23
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 3 GNPSKQC 9
G P K C
Sbjct: 424 GKPKKNC 430
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 3 GNPSKQC 9
G P K C
Sbjct: 429 GKPKKNC 435
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 2 VGNPSKQCP 10
VGN + CP
Sbjct: 574 VGNNTLHCP 582
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 GNPSKQC 9
GN KQC
Sbjct: 2148 GNVVKQC 2154
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 3 GNPSKQC 9
G P K C
Sbjct: 467 GTPKKNC 473
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 GNPSKQC 9
GN KQC
Sbjct: 2148 GNVVKQC 2154
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 3 GNPSKQC 9
G P K C
Sbjct: 467 GTPKKNC 473
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 3 GNPSKQC 9
G P K C
Sbjct: 435 GKPKKNC 441
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 3 GNPSKQC 9
G P K C
Sbjct: 467 GTPKKNC 473
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 3 GNPSKQC 9
G P K C
Sbjct: 426 GKPKKSC 432
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 3 GNPSKQC 9
G P K C
Sbjct: 459 GTPKKNC 465
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 3 GNPSKQC 9
G P K C
Sbjct: 464 GTPKKNC 470
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 3 GNPSKQC 9
G P K C
Sbjct: 463 GTPKKNC 469
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 3 GNPSKQC 9
G P K C
Sbjct: 473 GTPKKNC 479
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 1 RVGNPSKQ 8
+VG+P KQ
Sbjct: 561 QVGDPCKQ 568
20|SequenceR|105|96|APPFVRVGNP
>sp|VP7_ROTH9|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 2 PPFVRVGN 9
PPFV+ N
Sbjct: 45 PPFVKTQN 52
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 APPFVR 6
APP++R
Sbjct: 749 APPYIR 754
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 APPFVR 6
APPF++
Sbjct: 749 APPFIK 754
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 2 PPFVRV 7
PPF R+
Sbjct: 107 PPFARI 112
>sp|VP2_SVM93|MINOR capsid protein VP2|Sapporo virus (strain Human/United
Query: 1 APPFVRVGNP 10
APP + G P
Sbjct: 138 APPTTKFGKP 147
>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1
Query: 1 APPFVRVGNP 10
A FVR G+P
Sbjct: 383 AEVFVRYGDP 392
>sp|VP2_SVSAP|MINOR capsid protein VP2|Sapporo virus (isolate
Query: 1 APPFVRVGNP 10
APP + G P
Sbjct: 138 APPTAKSGRP 147
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 PFVRVGN 9
PF+ +GN
Sbjct: 753 PFISIGN 759
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 PFVRVGN 9
PF+ +GN
Sbjct: 753 PFISIGN 759
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 PFVRVGN 9
PF+ +GN
Sbjct: 752 PFISIGN 758
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 PFVRVGN 9
PF+ +GN
Sbjct: 753 PFISIGN 759
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 PFVRVGN 9
PF+ VGN
Sbjct: 752 PFMSVGN 758
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 PFVRVGN 9
PF+ +GN
Sbjct: 753 PFISIGN 759
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 PFVRVGN 9
PF+ +GN
Sbjct: 752 PFISIGN 758
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 PFVRVGN 9
PF+ +GN
Sbjct: 755 PFISIGN 761
>sp|VP35_MABVO|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 PPFVRVGN 9
PP +RV N
Sbjct: 281 PPVIRVKN 288
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 PFVRVGN 9
PF+ +GN
Sbjct: 751 PFISIGN 757
>sp|VP35_MABVP|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 PPFVRVGN 9
PP +RV N
Sbjct: 281 PPVIRVKN 288
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 PFVRVGN 9
PF+ +GN
Sbjct: 751 PFISIGN 757
>sp|VP35_MABVM|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 PPFVRVGN 9
PP +RV N
Sbjct: 281 PPVIRVKN 288
>sp|VP35_MABVA|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 PPFVRVGN 9
PP +RV N
Sbjct: 281 PPVIRVKN 288
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 PFVRVGN 9
PF ++GN
Sbjct: 1762 PFFKLGN 1768
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 PFVRVGN 9
PF ++GN
Sbjct: 1762 PFFKLGN 1768
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 2 PPFVRVGNP 10
P F+ +G P
Sbjct: 617 PAFLHLGEP 625
>sp|US35_HCMVA|UNCHARACTERIZED protein HHLF2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 APPFVRVGNP 10
+PPF+R +P
Sbjct: 64 SPPFMRYIHP 73
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PPFVRVGNP 10
P F+ +G P
Sbjct: 940 PAFLHLGEP 948
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 PFVRVGN 9
PF+ VGN
Sbjct: 753 PFMSVGN 759
>sp|YHL4_HCMVA|UNCHARACTERIZED protein HHLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PPFVRVGNP 10
P VR+ NP
Sbjct: 82 PAIVRIANP 90
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 4 FVRVGN 9
++RVGN
Sbjct: 93 YIRVGN 98
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 3 PFVRVGN 9
PF+ +GN
Sbjct: 494 PFLNLGN 500
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 3 PFVRVGN 9
PF+ +GN
Sbjct: 494 PFLNLGN 500
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 3 PFVRVGN 9
PF+ +GN
Sbjct: 494 PFLNLGN 500
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 PFVRVGN 9
PF+ +GN
Sbjct: 752 PFMSIGN 758
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 3 PFVRVGN 9
PF+ +GN
Sbjct: 755 PFISIGN 761
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 PFVRVGN 9
PF+ +GN
Sbjct: 752 PFMSIGN 758
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 PFVRVGN 9
PF+ +GN
Sbjct: 756 PFMSIGN 762
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 PFVRVGN 9
P VRVGN
Sbjct: 228 PCVRVGN 234
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 PFVRVGN 9
PF+ +GN
Sbjct: 751 PFLSIGN 757
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 PFVRVGN 9
PF+ +GN
Sbjct: 751 PFLSIGN 757
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 PFVRVGN 9
PF+ +GN
Sbjct: 750 PFMSIGN 756
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 PFVRVGN 9
P+VR GN
Sbjct: 228 PYVREGN 234
21|SequenceR|110|101|APPPMAPPFV
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 APPPMAPPFV 10
APP M+ PF+
Sbjct: 746 APPRMSIPFI 755
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 APPPMAPPFV 10
APP M+ PF+
Sbjct: 746 APPRMSIPFI 755
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 APPPMAPPFV 10
APP M+ PF+
Sbjct: 746 APPRMSIPFI 755
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 APPPMAPPFV 10
APP M+ PF+
Sbjct: 744 APPRMSIPFI 753
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 APPPMAPPFV 10
APP M+ PF+
Sbjct: 745 APPRMSIPFM 754
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 APPPMAPPFV 10
APP M+ PF+
Sbjct: 745 APPRMSIPFM 754
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 1 APPPMAPPF 9
+PPP+ PPF
Sbjct: 385 SPPPL-PPF 392
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 APPPMAPPFV 10
APP M+ PF+
Sbjct: 745 APPRMSIPFM 754
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 APPPMAPPFV 10
APP M+ PF+
Sbjct: 744 APPRMSVPFL 753
>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPPFV 10
P P APPF+
Sbjct: 453 PEPTAPPFL 461
Query: 2 PPPMAPP 8
P P APP
Sbjct: 465 PEPTAPP 471
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 APPPMAPPFV 10
APP M+ PF+
Sbjct: 743 APPRMSVPFM 752
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 APPPMAPPFV 10
APP M+ P+V
Sbjct: 766 APPRMSIPYV 775
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPMAPPFV 10
PP+ PP V
Sbjct: 465 PPLTPPHV 472
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 APPPMAPPFV 10
APP M+ PF+
Sbjct: 749 APPRMSIPFM 758
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 APPPMAPPFV 10
APP M+ PF+
Sbjct: 746 APPRMSIPFM 755
>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPPFV 10
P P APPF+
Sbjct: 453 PEPTAPPFL 461
Query: 2 PPPMAPP 8
P P APP
Sbjct: 465 PEPTAPP 471
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 APPPMAPPFV 10
APP M+ PF+
Sbjct: 744 APPRMSIPFL 753
>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPPFV 10
P P APPF+
Sbjct: 453 PEPTAPPFL 461
>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 3 PPMAPP 8
PP+ PP
Sbjct: 231 PPINPP 236
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 1 APPPMAPPFV 10
APP M+ PF+
Sbjct: 748 APPRMSIPFI 757
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 1 APPPMA 6
PPPM+
Sbjct: 26 GPPPMS 31
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 1 APPPMA 6
PPPM+
Sbjct: 26 GPPPMS 31
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 1 APPPMA 6
PPPM+
Sbjct: 26 GPPPMS 31
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 APPPMA 6
+PPPM
Sbjct: 1484 SPPPMG 1489
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 3 PPMAPP 8
PP+ PP
Sbjct: 465 PPLTPP 470
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 APPPMA 6
+PPPM
Sbjct: 1484 SPPPMG 1489
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 APPPMA 6
+PPPM
Sbjct: 1484 SPPPMG 1489
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 1 APPPMAPPF 9
AP P PP
Sbjct: 599 APVPTIPPL 607
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 APPPMAPPF 9
AP P PP
Sbjct: 593 APVPTIPPL 601
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 1 APPPMAPPF 9
AP P PP
Sbjct: 593 APVPTIPPL 601
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 1 APPPMAPPF 9
AP P PP
Sbjct: 599 APVPTIPPL 607
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 1 APPPMAPPF 9
AP P PP
Sbjct: 593 APVPTIPPL 601
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 1 APPPMAPPF 9
AP P PP
Sbjct: 605 APVPTIPPL 613
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 APPPMAPPFV 10
APP ++ PF+
Sbjct: 744 APPRISIPFI 753
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 1 APPPMAPPF 9
AP P PP
Sbjct: 593 APVPTIPPL 601
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 APPPMAPPF 9
AP P PP
Sbjct: 606 APVPTIPPL 614
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 1 APPPMAPPF 9
AP P PP
Sbjct: 593 APVPTIPPL 601
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 1 APPPMAPPF 9
AP P PP
Sbjct: 593 APVPTIPPL 601
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 1 APPPMAPPF 9
AP P PP
Sbjct: 593 APVPTIPPL 601
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 APPPMAPPFV 10
AP PM+PP V
Sbjct: 700 APTPMSPPEV 709
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 1 APPPMAPPF 9
AP P PP
Sbjct: 606 APVPTIPPL 614
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 APPPMAPPFV 10
AP PM+PP V
Sbjct: 700 APTPMSPPEV 709
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 3 PPMAP 7
PPMAP
Sbjct: 440 PPMAP 444
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PPMAPP 8
P MAPP
Sbjct: 578 PTMAPP 583
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 1 APPPMAPPF 9
AP P PP
Sbjct: 592 APVPTIPPL 600
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 1 APPPMAPPF 9
AP P PP
Sbjct: 592 APVPTIPPL 600
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 1 APPPMAPPF 9
AP P PP
Sbjct: 592 APVPTIPPL 600
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 1 APPPMAPPF 9
AP P PP
Sbjct: 592 APVPTIPPL 600
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 3 PPMAPP 8
PP APP
Sbjct: 66 PPTAPP 71
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPP 8
P P APP
Sbjct: 459 PEPTAPP 465
>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPP 8
P P APP
Sbjct: 453 PEPTAPP 459
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PPPMAPPF 9
PPP+A F
Sbjct: 953 PPPLALEF 960
>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPP 8
P P APP
Sbjct: 455 PEPTAPP 461
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 2 PPPMAPPF 9
PPP+A F
Sbjct: 953 PPPLALEF 960
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 APPPMAPPFV 10
APP ++ P+V
Sbjct: 772 APPRISIPYV 781
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PPPMAPPFV 10
PP + P F+
Sbjct: 397 PPGVRPDFI 405
>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPP 8
P P APP
Sbjct: 453 PEPTAPP 459
>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPP 8
P P APP
Sbjct: 448 PEPTAPP 454
>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPP 8
P P APP
Sbjct: 454 PEPTAPP 460
>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPP 8
P P APP
Sbjct: 452 PEPTAPP 458
>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPP 8
P P APP
Sbjct: 451 PEPTAPP 457
>sp|GAG_HV1N5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPP 8
P P APP
Sbjct: 453 PEPTAPP 459
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPP 8
P P APP
Sbjct: 453 PEPTAPP 459
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 APPPMAPP 8
APP PP
Sbjct: 475 APPGAQPP 482
>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPP 8
P P APP
Sbjct: 452 PEPTAPP 458
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPP 8
P P APP
Sbjct: 453 PEPTAPP 459
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPP 8
P P APP
Sbjct: 453 PEPTAPP 459
>sp|SPIK2_ADE40|FIBER protein 2|Human adenovirus F serotype 40
Query: 3 PPMAPPFV 10
P +APPFV
Sbjct: 25 PYVAPPFV 32
>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPP 8
P P APP
Sbjct: 455 PEPTAPP 461
>sp|GAG_HV1J3|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPP 8
P P APP
Sbjct: 453 PEPTAPP 459
>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPP 8
P P APP
Sbjct: 455 PEPTAPP 461
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 APPPMAPP 8
APP PP
Sbjct: 475 APPGAQPP 482
>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPP 8
P P APP
Sbjct: 448 PEPTAPP 454
>sp|GAG_HV1M2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPP 8
P P APP
Sbjct: 452 PEPTAPP 458
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 PPMAPP 8
PP PP
Sbjct: 529 PPQTPP 534
>sp|VL2_HPV32|MINOR capsid protein L2|Human papillomavirus type 32
Query: 3 PPMAPPFV 10
PP +PPF+
Sbjct: 424 PPESPPFI 431
>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPP 8
P P APP
Sbjct: 452 PEPTAPP 458
>sp|GAG_HV190|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPP 8
P P APP
Sbjct: 454 PEPTAPP 460
>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPP 8
P P APP
Sbjct: 447 PEPTAPP 453
>sp|SPIK2_ADE41|FIBER protein 2|Human adenovirus F serotype 41
Query: 3 PPMAPPFV 10
P +APPFV
Sbjct: 25 PYVAPPFV 32
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 APPPMAPP 8
APP PP
Sbjct: 476 APPGADPP 483
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 APPPMAPP 8
APP PP
Sbjct: 476 APPGADPP 483
>sp|GAG_HV1U4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPP 8
P P APP
Sbjct: 447 PEPTAPP 453
>sp|GAG_HV196|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PPPMAPP 8
P P APP
Sbjct: 448 PEPTAPP 454
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 APPPMAPPFV 10
AP P APP +
Sbjct: 281 APVPSAPPMI 290
>sp|MB43_HHV11|MEMBRANE protein UL43|Human herpesvirus 1 (strain 17)
Query: 1 APPPMAPP 8
APPP+A P
Sbjct: 79 APPPLARP 86
>sp|CAPSP_ADE12|PENTON protein|Human adenovirus A serotype 12
Query: 1 APPPMAPP 8
A PP PP
Sbjct: 26 AAPPYVPP 33
22|SequenceR|115|106|PSLHTAPPPM
>sp|UL05_HCMVA|PROTEIN UL5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PSLHTAPPP 9
PSL APPP
Sbjct: 75 PSLAIAPPP 83
>sp|UL05_HCMVM|PROTEIN UL5|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PSLHTAPPP 9
PSL APPP
Sbjct: 75 PSLAIAPPP 83
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 4 HTAPPPM 10
+T PPPM
Sbjct: 24 YTGPPPM 30
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 4 HTAPPPM 10
+T PPPM
Sbjct: 24 YTGPPPM 30
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 4 HTAPPPM 10
+T PPPM
Sbjct: 24 YTGPPPM 30
>sp|VL2_HPV42|MINOR capsid protein L2|Human papillomavirus 42
Query: 1 PSLHTAPPP 9
PS+HTAP P
Sbjct: 273 PSIHTAPDP 281
>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PSLHTAPPP 9
P L PPP
Sbjct: 265 PKLFNTPPP 273
>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)
Query: 1 PSLHTAPPP 9
P L PPP
Sbjct: 265 PKLFNTPPP 273
>sp|MATRX_RABVI|MATRIX protein|Rabies virus (strain India) (RABV)
Query: 1 PSLHTAPP 8
PSL +APP
Sbjct: 19 PSLVSAPP 26
>sp|VL2_HPV07|MINOR capsid protein L2|Human papillomavirus 7
Query: 1 PSLHTAPPP 9
PS+H AP P
Sbjct: 269 PSIHNAPDP 277
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 5 TAPPPM 10
T PPP+
Sbjct: 31 TGPPPI 36
>sp|VL2_HPV40|MINOR capsid protein L2|Human papillomavirus 40
Query: 1 PSLHTAPPP 9
PS+H AP P
Sbjct: 269 PSIHDAPDP 277
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 1 PSLHTAPPP 9
P+LH P P
Sbjct: 255 PNLHVLPQP 263
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 3 LHTAPP 8
LHT PP
Sbjct: 593 LHTGPP 598
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 LHTAPPPM 10
LH+A PP+
Sbjct: 539 LHSARPPL 546
>sp|VL2_HPV54|MINOR capsid protein L2|Human papillomavirus type 54
Query: 1 PSLHTAPPP 9
P++H AP P
Sbjct: 269 PTIHNAPDP 277
>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)
Query: 3 LHTAPPP 9
L +APPP
Sbjct: 301 LFSAPPP 307
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 4 HTAPPP 9
TAPPP
Sbjct: 34 QTAPPP 39
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 4 HTAPPP 9
TAPPP
Sbjct: 34 QTAPPP 39
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PSLHTAPPPM 10
P+L+ PP M
Sbjct: 68 PTLYLEPPEM 77
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PSLHTAPPPM 10
P+L+ PP M
Sbjct: 68 PTLYLEPPEM 77
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PSLHTAPPPM 10
P+L+ PP M
Sbjct: 68 PTLYLEPPEM 77
23|SequenceR|120|111|VPALAPSLHT
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 4 LAPSLHT 10
LAP++HT
Sbjct: 876 LAPNIHT 882
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 4 LAPSLHT 10
LAP++HT
Sbjct: 2207 LAPNIHT 2213
>sp|CORE5_ADE05|CORE-CAPSID bridging protein|Human adenovirus C serotype 5
Query: 1 VPALAPS 7
+PALAPS
Sbjct: 149 LPALAPS 155
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 1 VPALAPSLHT 10
+PA PS+ T
Sbjct: 816 IPAYVPSIVT 825
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 1 VPALAPSLHT 10
+PA PS+ T
Sbjct: 823 IPAYVPSVVT 832
24|SequenceR|125|116|CSNRPVPALA
>sp|VE2_HPV47|REGULATORY protein E2|Human papillomavirus 47
Query: 4 RPVPALA 10
+PVPALA
Sbjct: 57 QPVPALA 63
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 2 SNRPVPALA 10
S+RPVP A
Sbjct: 343 SSRPVPGAA 351
>sp|US18_HCMVT|TRANSMEMBRANE protein HWLF5|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 CSNRPVPALA 10
C+N VPAL+
Sbjct: 75 CANGIVPALS 84
>sp|US18_HCMVM|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CSNRPVPALA 10
C+N VPAL+
Sbjct: 75 CANGIVPALS 84
>sp|US18_HCMVA|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CSNRPVPALA 10
C+N VPAL+
Sbjct: 75 CANGIVPALS 84
>sp|VE2_HPV38|REGULATORY protein E2|Human papillomavirus 38
Query: 4 RPVPALA 10
+PVP+LA
Sbjct: 57 QPVPSLA 63
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 1 CSNRPVP 7
C N PVP
Sbjct: 174 CKNTPVP 180
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 1 CSNRPVP 7
C N PVP
Sbjct: 174 CKNVPVP 180
>sp|VE2_HPV22|REGULATORY protein E2|Human papillomavirus 22
Query: 4 RPVPALA 10
+PVP LA
Sbjct: 57 QPVPTLA 63
>sp|US14_HCMVA|UNCHARACTERIZED protein HVLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CSNRPVPAL 9
CS+ P P L
Sbjct: 97 CSDDPSPLL 105
>sp|VE2_HPV20|REGULATORY protein E2|Human papillomavirus 20
Query: 4 RPVPALA 10
+PVP LA
Sbjct: 57 QPVPVLA 63
>sp|VE2_HPV19|REGULATORY protein E2|Human papillomavirus 19
Query: 4 RPVPALA 10
+PVP LA
Sbjct: 57 QPVPTLA 63
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 SNRPVP 7
+NRP+P
Sbjct: 504 ANRPLP 509
>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25
Query: 4 RPVPAL 9
+PVPAL
Sbjct: 57 QPVPAL 62
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 SNRPVP 7
+NRP+P
Sbjct: 504 ANRPLP 509
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 SNRPVP 7
+NRP+P
Sbjct: 504 ANRPLP 509
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 2 SNRPVPA 8
+NRP+PA
Sbjct: 459 ANRPLPA 465
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 SNRPVPA 8
+NRP+PA
Sbjct: 459 ANRPLPA 465
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 2 SNRPVPA 8
+NRP+PA
Sbjct: 459 ANRPLPA 465
>sp|VE2_HPV12|REGULATORY protein E2|Human papillomavirus 12
Query: 4 RPVPALA 10
+PVP LA
Sbjct: 57 QPVPTLA 63
>sp|MC148_MCV1|CHEMOKINE-LIKE protein MC148|Molluscum contagiosum virus subtype 1
Query: 2 SNRPVP 7
+NRP+P
Sbjct: 35 TNRPIP 40
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 SNRPVPA 8
+ RPVPA
Sbjct: 1761 AERPVPA 1767
25|SequenceR|130|121|QPCTICSNRP
>sp|GLYC_HRSV5|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 2 PCTICSNRP 10
PC+ICSN P
Sbjct: 172 PCSICSNNP 180
>sp|GLYC_HRSV|MAJOR surface glycoprotein G|Human respiratory syncytial virus
Query: 2 PCTICSNRP 10
PC+ICSN P
Sbjct: 172 PCSICSNNP 180
>sp|GLYC_HRSV4|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 2 PCTICSNRP 10
PC+ICSN P
Sbjct: 172 PCSICSNNP 180
>sp|GLYC_HRSV6|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 2 PCTICSNRP 10
PC+ICSN P
Sbjct: 172 PCSICSNNP 180
>sp|GLYC_HRSV7|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 2 PCTICSNRP 10
PC+ICSN P
Sbjct: 172 PCSICSNNP 180
>sp|GLYC_HRSV3|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 2 PCTICSNRP 10
PC+ICSN P
Sbjct: 172 PCSICSNNP 180
>sp|GLYC_HRSVA|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 2 PCTICSNRP 10
PC+ICSN P
Sbjct: 172 PCSICSNNP 180
>sp|GLYC_HRSV2|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 2 PCTICSNRP 10
PC+ICSN P
Sbjct: 172 PCSICSNNP 180
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 PCTICSNRP 10
PC IC+ P
Sbjct: 1641 PCEICAQNP 1649
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 CTICSNR 9
C +CSNR
Sbjct: 6194 CNVCSNR 6200
Query: 2 PCTICSNRP 10
P ICSN P
Sbjct: 1884 PFLICSNTP 1892
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 CTICSNR 9
C +CSNR
Sbjct: 6144 CNVCSNR 6150
Query: 2 PCTICSNRP 10
P ICSN P
Sbjct: 1834 PFLICSNTP 1842
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 PCTICSNRP 10
P ICSN P
Sbjct: 1854 PFLICSNTP 1862
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 PCTICSNRP 10
P ICSN P
Sbjct: 1884 PFLICSNTP 1892
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 PCTICSNRP 10
P ICSN P
Sbjct: 1834 PFLICSNTP 1842
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 PCTICSNRP 10
P ICSN P
Sbjct: 1798 PFLICSNTP 1806
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 PCTICSNRP 10
P ICSN P
Sbjct: 1854 PFLICSNTP 1862
Query: 3 CTICSNR 9
C +C NR
Sbjct: 6164 CDVCPNR 6170
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 PCTICSNRP 10
P ICSN P
Sbjct: 1798 PFLICSNTP 1806
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 4 TICSNRP 10
T+C NRP
Sbjct: 508 TMCYNRP 514
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 TICSNRP 10
T+C NRP
Sbjct: 508 TMCYNRP 514
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 4 TICSNRP 10
T+C NRP
Sbjct: 508 TMCYNRP 514
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 2 PCTICSNRP 10
PC +C P
Sbjct: 244 PCIVCVGSP 252
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 2 PCTICSNRP 10
PC +C P
Sbjct: 244 PCIVCVGSP 252
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PCTICSNRP 10
PC +C P
Sbjct: 244 PCIVCVGSP 252
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PCTICSNRP 10
PC IC P
Sbjct: 296 PCIICVGSP 304
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PCTICSNRP 10
PC IC P
Sbjct: 296 PCIICVGSP 304
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 2 PCTICSNRP 10
PC +C P
Sbjct: 236 PCIVCVGSP 244
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 QPCTICSNRP 10
Q CTIC P
Sbjct: 734 QTCTICETTP 743
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PCTICSNR 9
PC +C R
Sbjct: 281 PCALCKKR 288
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 2 PCTICSNR 9
PC +C R
Sbjct: 281 PCALCKKR 288
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 2 PCTICSNR 9
PC +C R
Sbjct: 281 PCALCKKR 288
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 PCTICSNR 9
PC +C R
Sbjct: 281 PCALCKKR 288
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PCTICSNRP 10
PC +C P
Sbjct: 237 PCIVCVGSP 245
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 PCTIC 6
PC+IC
Sbjct: 2264 PCSIC 2268
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 PCTIC 6
PC+IC
Sbjct: 2264 PCSIC 2268
>sp|GLRX2_VARV|GLUTAREDOXIN-2 virus
Query: 3 CTICSN 8
C+IC N
Sbjct: 13 CSICEN 18
>sp|GLRX2_VAR67|GLUTAREDOXIN-2 virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 CTICSN 8
C+IC N
Sbjct: 13 CSICEN 18
>sp|GLRX2_VACCT|GLUTAREDOXIN-2 virus (strain Tian Tan)
Query: 3 CTICSN 8
C+IC N
Sbjct: 13 CSICEN 18
>sp|GLRX2_VACCC|GLUTAREDOXIN-2 virus (strain Copenhagen) (VACV)
Query: 3 CTICSN 8
C+IC N
Sbjct: 13 CSICEN 18
>sp|GLRX2_VACCA|GLUTAREDOXIN-2 virus (strain Ankara) (VACV)
Query: 3 CTICSN 8
C+IC N
Sbjct: 13 CSICEN 18
>sp|GLRX2_MONPV|GLUTAREDOXIN-2 virus (MPXV)
Query: 3 CTICSN 8
C+IC N
Sbjct: 13 CSICEN 18
>sp|GLRX2_CWPXG|GLUTAREDOXIN-2 virus (strain GRI-90 /
Query: 3 CTICSN 8
C+IC N
Sbjct: 13 CSICEN 18
>sp|GLRX2_CWPXB|GLUTAREDOXIN-2 virus (strain Brighton Red)
Query: 3 CTICSN 8
C+IC N
Sbjct: 13 CSICEN 18
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 4 TICSNRP 10
T+C N+P
Sbjct: 132 TVCRNQP 138
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 4 TICSNRP 10
T+C N+P
Sbjct: 132 TVCRNQP 138
>sp|GLYC_HRSVB|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 2 PCTICSN 8
PC+IC N
Sbjct: 172 PCSICGN 178
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 4 TICSNRP 10
T+C N+P
Sbjct: 132 TVCRNQP 138
>sp|GLYC_HRSV1|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 2 PCTICSN 8
PC+IC N
Sbjct: 172 PCSICGN 178
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 4 TICSNRP 10
T+C N+P
Sbjct: 132 TVCRNQP 138
>sp|GLYC_HRSV8|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 2 PCTICSN 8
PC+IC N
Sbjct: 172 PCSICGN 178
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 QPCTIC 6
PC IC
Sbjct: 197 HPCAIC 202
>sp|TAT_HV1U4|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 1 QPCTICSN 8
QP T CSN
Sbjct: 17 QPTTACSN 24
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 PCTIC 6
PC++C
Sbjct: 2287 PCSVC 2291
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 PCTIC 6
PC++C
Sbjct: 2287 PCSVC 2291
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 2 PCTICS 7
PC +C+
Sbjct: 498 PCNLCT 503
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 QPCTICSN 8
+PC +C++
Sbjct: 1118 RPCQLCNS 1125
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 PCTICS 7
PC +C+
Sbjct: 498 PCNLCT 503
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 2 PCTICS 7
PC +C+
Sbjct: 498 PCNLCT 503
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 PCTICS 7
PC +C+
Sbjct: 498 PCNLCT 503
>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)
Query: 3 CTICS 7
CT+CS
Sbjct: 170 CTVCS 174
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 2 PCTICS 7
PC +C+
Sbjct: 498 PCNLCT 503
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 PCTICSNRP 10
P TI SN P
Sbjct: 886 PTTIHSNTP 894
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 PCTICSNRP 10
P TI SN P
Sbjct: 886 PTTIHSNTP 894
>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain
Query: 3 CTICSNR 9
TIC+NR
Sbjct: 116 ATICTNR 122
>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)
Query: 3 CTICSNR 9
TIC+NR
Sbjct: 116 ATICTNR 122
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 1 QPCTIC 6
PC +C
Sbjct: 195 HPCAVC 200
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 1 QPCTIC 6
PC +C
Sbjct: 195 HPCAVC 200
>sp|US02_HHV2H|PROTEIN US2|Human herpesvirus 2 (strain HG52)
Query: 1 QPCTICSNRP 10
+PC C RP
Sbjct: 241 RPCFTCMGRP 250
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 QPCTICSNR 9
Q C +C+ R
Sbjct: 6113 QKCCMCNRR 6121
Query: 2 PCTIC 6
PC +C
Sbjct: 4353 PCNVC 4357
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 PCTICSN 8
PC +C++
Sbjct: 1119 PCQLCNS 1125
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 1 QPCTIC 6
PC +C
Sbjct: 199 HPCAVC 204
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 PCTIC 6
PC +C
Sbjct: 4353 PCNVC 4357
>sp|VE7_HPV16|PROTEIN E7|Human papillomavirus type 16
Query: 3 CTICSNRP 10
C ICS +P
Sbjct: 91 CPICSQKP 98
>sp|VU84_HHV7J|PROTEIN U84|Human herpesvirus 7 (strain JI)
Query: 1 QPCTICSNR 9
PC +CS +
Sbjct: 133 HPCGLCSPK 141
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 2 PCTIC 6
PC++C
Sbjct: 496 PCSLC 500
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PCTIC 6
PC++C
Sbjct: 496 PCSLC 500
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 QPCTICSNRP 10
+PC S RP
Sbjct: 604 RPCNTWSGRP 613
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 QPCTICSNRP 10
+PC S RP
Sbjct: 604 RPCNTWSGRP 613
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 QPCTICSNRP 10
+PC S RP
Sbjct: 604 RPCNTWSGRP 613
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 1 QPCTIC 6
PC +C
Sbjct: 194 HPCAVC 199
>sp|VE6_HPV25|PROTEIN E6|Human papillomavirus 25
Query: 2 PCTICSN 8
PC C N
Sbjct: 44 PCNFCGN 50
26|SequenceR|135|126|LSRHCQPCTI
>sp|UL38_HCMVA|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LSRHCQP 7
L RHC P
Sbjct: 83 LERHCPP 89
>sp|UL38_HCMVM|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LSRHCQP 7
L RHC P
Sbjct: 83 LERHCPP 89
>sp|Y126_ADE07|UNCHARACTERIZED 12.6 kDa early protein|Human adenovirus B serotype 7
Query: 4 HCQPC 8
HCQPC
Sbjct: 28 HCQPC 32
>sp|NSP1_ROT41|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 1 LSRHCQP 7
L RHC+P
Sbjct: 299 LGRHCKP 305
>sp|NS12_CVHN5|NON-STRUCTURAL protein 4|Human coronavirus HKU1 (isolate N5)
Query: 4 HCQPC 8
+CQPC
Sbjct: 31 YCQPC 35
>sp|NS12_CVHN2|NON-STRUCTURAL protein 4|Human coronavirus HKU1 (isolate N2)
Query: 4 HCQPC 8
+CQPC
Sbjct: 31 YCQPC 35
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 LSRHC 5
LSRHC
Sbjct: 1416 LSRHC 1420
>sp|UL121_HCMVA|MEMBRANE protein UL121|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SRHCQPCT 9
+RHC CT
Sbjct: 83 TRHCTSCT 90
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LSRHCQPCTI 10
L+RH + C I
Sbjct: 1174 LTRHTEKCVI 1183
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LSRHCQPCTI 10
L+RH + C I
Sbjct: 1174 LTRHTEKCVI 1183
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LSRHCQPCTI 10
L+RH + C I
Sbjct: 1174 LTRHTEKCVI 1183
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 LSRHCQPCTI 10
L+RH + C I
Sbjct: 1189 LTRHTEKCVI 1198
Query: 1 LSRHCQPCTI 10
+ R C CTI
Sbjct: 969 VGRACAGCTI 978
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 LSRHCQPCTI 10
L+RH + C I
Sbjct: 1189 LTRHTEKCVI 1198
Query: 1 LSRHCQPCTI 10
+ R C CTI
Sbjct: 969 VGRACAGCTI 978
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 LSRHCQP 7
L RH QP
Sbjct: 1585 LPRHSQP 1591
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 LSRHCQP 7
L RH QP
Sbjct: 1585 LPRHSQP 1591
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 LSRHCQP 7
L RH QP
Sbjct: 1585 LPRHSQP 1591
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 LSRHCQP 7
L RH QP
Sbjct: 1585 LPRHSQP 1591
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 LSRHCQP 7
L RH QP
Sbjct: 1585 LPRHSQP 1591
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 LSRHCQPCTI 10
L+RH + C I
Sbjct: 1172 LTRHTEKCVI 1181
>sp|VP35_MABVR|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ravn-87)
Query: 4 HCQPCTI 10
C PC I
Sbjct: 46 QCSPCLI 52
>sp|SPI2_VARV|SERINE proteinase inhibitor 2|Variola virus
Query: 1 LSRHCQPCT 9
+ R+C P T
Sbjct: 335 VGRYCSPTT 343
>sp|SPI2_VAR67|SERINE proteinase inhibitor 2|Variola virus (isolate
Query: 1 LSRHCQPCT 9
+ R+C P T
Sbjct: 335 VGRYCSPTT 343
>sp|SPI2_MONPV|SERINE proteinase inhibitor 2|Monkeypox virus (MPXV)
Query: 1 LSRHCQPCT 9
+ R+C P T
Sbjct: 335 VGRYCSPTT 343
>sp|SPI2_CWPXB|SERINE proteinase inhibitor 2|Cowpox virus (strain Brighton Red)
Query: 1 LSRHCQPCT 9
+ R+C P T
Sbjct: 332 VGRYCSPTT 340
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 1 LSRHC 5
+SRHC
Sbjct: 618 ISRHC 622
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 LSRHC 5
+SRHC
Sbjct: 618 ISRHC 622
>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LSRHC 5
+SRHC
Sbjct: 618 ISRHC 622
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 1 LSRHC 5
+SRHC
Sbjct: 618 ISRHC 622
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 1 LSRHCQPC 8
+ ++C PC
Sbjct: 437 MRKYCIPC 444
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 1 LSRHCQPC 8
+ ++C PC
Sbjct: 437 MRKYCIPC 444
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 LSRHCQPC 8
+ ++C PC
Sbjct: 437 MRKYCIPC 444
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 1 LSRHCQPC 8
+ ++C PC
Sbjct: 437 MRKYCIPC 444
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 1 LSRHCQPC 8
+ ++C PC
Sbjct: 437 MRKYCIPC 444
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 LSRHCQPCTI 10
L+RH + C +
Sbjct: 1188 LTRHTEKCVV 1197
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 SRHCQPCTI 10
+RH PC I
Sbjct: 851 TRHILPCRI 859
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 SRHCQPCTI 10
+RH PC I
Sbjct: 851 TRHILPCRI 859
>sp|SPI2B_VACCC|PUTATIVE serine proteinase inhibitor 2|Vaccinia virus (strain Copenhagen)
Query: 1 LSRHCQPCT 9
+ R+C P T
Sbjct: 212 VGRYCSPTT 220
>sp|E1B55_ADE12|E1B 55 kDa protein|Human adenovirus A serotype 12
Query: 2 SRHCQP 7
SRHC P
Sbjct: 363 SRHCWP 368
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 SRHCQPCTI 10
+RH PC I
Sbjct: 851 TRHIFPCRI 859
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 SRHCQPCTI 10
+RH PC I
Sbjct: 851 TRHIFPCRI 859
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LSRHCQ 6
+++HCQ
Sbjct: 831 ITKHCQ 836
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 1 LSRHCQ 6
+++HCQ
Sbjct: 968 IAKHCQ 973
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 LSRHCQPCT 9
+S QPCT
Sbjct: 810 VSAPSQPCT 818
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 SRHCQPCTI 10
SR CQ C +
Sbjct: 1031 SRGCQGCEL 1039
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 5 CQPCTI 10
C PC +
Sbjct: 260 CNPCIV 265
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 SRHCQPCTI 10
+RH PC +
Sbjct: 852 TRHILPCRV 860
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 4 HCQPCTI 10
+CQ CT+
Sbjct: 53 YCQGCTM 59
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 LSRHCQPC 8
LS H PC
Sbjct: 232 LSAHGNPC 239
27|SequenceR|140|131|RDDLILSRHC
>sp|NCAP_PTPV|NUCLEOPROTEIN toro phlebovirus
Query: 1 RDDLILSR 8
RDDL LSR
Sbjct: 98 RDDLTLSR 105
>sp|NCAP_RVFVZ|NUCLEOPROTEIN valley fever virus (strain
Query: 1 RDDLILSR 8
RD+L LSR
Sbjct: 99 RDELTLSR 106
>sp|NCAP_RVFV|NUCLEOPROTEIN valley fever virus (RVFV)
Query: 1 RDDLILSR 8
RD+L LSR
Sbjct: 99 RDELTLSR 106
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 RDDLILSRH 9
R+D+I S+H
Sbjct: 1660 REDIITSKH 1668
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 RDDLILSRH 9
R+D+I S+H
Sbjct: 1660 REDIITSKH 1668
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 RDDLIL 6
RDDLIL
Sbjct: 632 RDDLIL 637
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 3 DLILSRH 9
DL+++RH
Sbjct: 28 DLLMARH 34
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 3 DLILSRH 9
DL+++RH
Sbjct: 28 DLLMARH 34
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 RDDLILS 7
+DDLIL+
Sbjct: 884 KDDLILT 890
>sp|PG068_VACCC|PROTEIN OPG068|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 DLILSRH 9
D++L+RH
Sbjct: 245 DIVLNRH 251
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 RDDLILSRHC 10
+DDL +R C
Sbjct: 1624 QDDLAATRIC 1633
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 2 DDLILS 7
DDLILS
Sbjct: 100 DDLILS 105
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 2 DDLILS 7
DDLILS
Sbjct: 100 DDLILS 105
28|SequenceR|145|136|FGRLGRDDLI
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 FGRLGRDDL 9
FG L R+DL
Sbjct: 1767 FGTLSREDL 1775
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 FGRLGRDDL 9
FG L R+DL
Sbjct: 1767 FGTLSREDL 1775
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 2 GRLGRDDLI 10
G LGRD+L+
Sbjct: 92 GDLGRDELM 100
>sp|VC02_VACCT|KELCH repeat protein C2|Vaccinia virus (strain Tian Tan)
Query: 1 FGRLGRDDL 9
FG+L +D+L
Sbjct: 138 FGKLSKDEL 146
>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FGRLGRDDL 9
FG+L +D+L
Sbjct: 138 FGKLSKDEL 146
>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /
Query: 1 FGRLGRDDL 9
FG+L +D+L
Sbjct: 138 FGKLSKDEL 146
>sp|NCAP_HRSVB|NUCLEOPROTEIN respiratory syncytial virus B
Query: 3 RLGRDDLI 10
RLGR+D I
Sbjct: 73 RLGREDTI 80
>sp|NCAP_HRSVA|NUCLEOPROTEIN respiratory syncytial virus A
Query: 3 RLGRDDLI 10
RLGR+D I
Sbjct: 73 RLGREDTI 80
>sp|NCAP_HRSV1|NUCLEOPROTEIN respiratory syncytial virus B
Query: 3 RLGRDDLI 10
RLGR+D I
Sbjct: 73 RLGREDTI 80
>sp|NCAP_HRSV|NUCLEOPROTEIN respiratory syncytial virus
Query: 3 RLGRDDLI 10
RLGR+D I
Sbjct: 73 RLGREDTI 80
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 GRLGRD 7
GR+GRD
Sbjct: 1942 GRIGRD 1947
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 GRLGRD 7
GR+GRD
Sbjct: 1956 GRIGRD 1961
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 GRLGRD 7
GR+GRD
Sbjct: 1958 GRVGRD 1963
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 GRLGRD 7
GR+GRD
Sbjct: 1957 GRVGRD 1962
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 GRLGRDD 8
GR+GR D
Sbjct: 1951 GRVGRQD 1957
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 GRLGRDD 8
GR+GR D
Sbjct: 1951 GRVGRQD 1957
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 GRLGRDD 8
GR+GR D
Sbjct: 1951 GRVGRQD 1957
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GRLGRD 7
G+LGRD
Sbjct: 408 GKLGRD 413
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GRLGRD 7
G+LGRD
Sbjct: 414 GKLGRD 419
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 FGRLGRDDLI 10
+G+LG D+ I
Sbjct: 592 YGQLGEDNEI 601
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FGRLGRDDLI 10
+G+LG D+ I
Sbjct: 592 YGQLGEDNEI 601
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FGRLGRDDLI 10
+G+LG D+ I
Sbjct: 591 YGQLGEDNEI 600
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 2 GRLGRDDL 9
GR+ +DD
Sbjct: 732 GRMSKDDF 739
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 2 GRLGRDDL 9
GR+ +DD
Sbjct: 732 GRMSKDDF 739
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 2 GRLGRDDL 9
GR+ +DD
Sbjct: 732 GRMSKDDF 739
>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)
Query: 2 GRLGRDDLI 10
G LG+D+L+
Sbjct: 92 GDLGKDELM 100
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 GRLGRDDLI 10
G +G DD++
Sbjct: 927 GPIGHDDMV 935
>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 LGRDDLI 10
LG+DD I
Sbjct: 126 LGQDDFI 132
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 4 LGRDDLI 10
L RDDL+
Sbjct: 743 LSRDDLL 749
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 GRLGRD 7
GRLG D
Sbjct: 530 GRLGND 535
>sp|IR01_HCMVM|PROTEIN RL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FGRLGRDDLI 10
FG +GR ++
Sbjct: 142 FGTMGRQPVV 151
>sp|IR01_HCMVA|UNCHARACTERIZED protein HKLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FGRLGRDDLI 10
FG +GR ++
Sbjct: 142 FGTMGRQPVV 151
29|SequenceR|150|141|VRNKPFGRLG
>sp|PG148_VARV|DNA polymerase processivity factor component|Variola virus
Query: 1 VRNKPF 6
V+NKPF
Sbjct: 64 VKNKPF 69
>sp|PG148_VAR67|DNA polymerase processivity factor component|Variola virus (isolate
Query: 1 VRNKPF 6
V+NKPF
Sbjct: 64 VKNKPF 69
>sp|PG148_VACCC|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 1 VRNKPF 6
V+NKPF
Sbjct: 64 VKNKPF 69
>sp|PG148_MONPV|DNA polymerase processivity factor component|Monkeypox virus (MPXV)
Query: 1 VRNKPF 6
V+NKPF
Sbjct: 64 VKNKPF 69
>sp|A20_VACCA|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 1 VRNKPF 6
V+NKPF
Sbjct: 64 VKNKPF 69
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 VRNKPFGR 8
V+N+PF +
Sbjct: 736 VKNRPFNK 743
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 5 PFGRL 9
PFGRL
Sbjct: 2750 PFGRL 2754
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 5 PFGRL 9
PFGRL
Sbjct: 2662 PFGRL 2666
>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain
Query: 1 VRNKPFGR 8
+RN FGR
Sbjct: 347 IRNYQFGR 354
>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain
Query: 1 VRNKPFGR 8
+RN FGR
Sbjct: 347 IRNYQFGR 354
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 VRNKPFGRL 9
V+N PF L
Sbjct: 1673 VKNTPFSHL 1681
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 VRNKPFGRL 9
V+N PF L
Sbjct: 1673 VKNTPFSHL 1681
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 VRNKPFGRL 9
V+N PF L
Sbjct: 1673 VKNTPFSHL 1681
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 VRNKPFGRL 9
V+N PF L
Sbjct: 1673 VKNTPFSHL 1681
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 1 VRNKPFGR 8
++N+PF +
Sbjct: 736 IKNRPFNK 743
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VRNKPFGR 8
++N+PF +
Sbjct: 736 IKNRPFNK 743
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 VRNKPFGRL 9
V+N P+G L
Sbjct: 1134 VQNAPYGLL 1142
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 VRNKPFGRL 9
V+N P+G L
Sbjct: 1134 VQNAPYGLL 1142
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 1 VRNKPFGRL 9
V+N P+G L
Sbjct: 1138 VQNAPYGLL 1146
>sp|GL_HHV6U|ENVELOPE glycoprotein L|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RNKPFGRL 9
+ KPF R+
Sbjct: 74 KKKPFSRI 81
>sp|GL_HHV6Z|ENVELOPE glycoprotein L|Human herpesvirus 6B (strain Z29)
Query: 2 RNKPFGRL 9
+ KPF R+
Sbjct: 74 KKKPFSRI 81
>sp|NEF_HV2D2|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 VRNKPFGRL 9
V +P+GRL
Sbjct: 23 VPERPYGRL 31
30|SequenceR|155|146|IVGELVRNKP
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 3 GELVRN 8
GELVRN
Sbjct: 219 GELVRN 224
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 1 IVGELVRN 8
IVG+ VRN
Sbjct: 639 IVGKTVRN 646
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 1 IVGELVRN 8
IVG+ VRN
Sbjct: 639 IVGKTVRN 646
>sp|PG200_VARV|PROTEIN OPG200|Variola virus
Query: 2 VGELVRNKP 10
V ELV+N P
Sbjct: 68 VRELVKNMP 76
>sp|PG200_VAR67|PROTEIN OPG200|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 VGELVRNKP 10
V ELV+N P
Sbjct: 68 VRELVKNMP 76
>sp|PG200_MONPV|PROTEIN OPG200|Monkeypox virus (MPXV)
Query: 2 VGELVRNKP 10
V ELV+N P
Sbjct: 68 VRELVKNMP 76
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 1 IVGELVRN 8
I+G+ VRN
Sbjct: 639 IIGKTVRN 646
>sp|PG200_VACCC|PROTEIN OPG200|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VGELVRNKP 10
+ ELV+N P
Sbjct: 68 IRELVKNMP 76
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 VGELVRNKP 10
+G+L NKP
Sbjct: 886 LGQLAINKP 894
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 VGELVRNKP 10
+G+L NKP
Sbjct: 886 LGQLAINKP 894
>sp|TEG7_EBVG|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 VGELVRNK 9
VG+L+RN+
Sbjct: 53 VGDLLRNE 60
>sp|TEG7_EBVB9|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 VGELVRNK 9
VG+L+RN+
Sbjct: 53 VGDLLRNE 60
>sp|TEG7_EBVA8|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 VGELVRNK 9
VG+L+RN+
Sbjct: 53 VGDLLRNE 60
>sp|ETF1_VACCC|EARLY transcription factor 70 kDa|Vaccinia virus (strain Copenhagen)
Query: 1 IVGELVR 7
++GELVR
Sbjct: 542 LLGELVR 548
>sp|ETF1_VACCT|EARLY transcription factor 70 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 IVGELVR 7
++GELVR
Sbjct: 542 LLGELVR 548
>sp|ETF1_VACCA|EARLY transcription factor 70 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 IVGELVR 7
++GELVR
Sbjct: 542 LLGELVR 548
>sp|ETF1_VAR67|EARLY transcription factor 70 kDa|Variola virus (isolate
Query: 1 IVGELVR 7
++GELVR
Sbjct: 542 LLGELVR 548
>sp|ETF1_VARV|EARLY transcription factor 70 kDa|Variola virus
Query: 1 IVGELVR 7
++GELVR
Sbjct: 542 LLGELVR 548
>sp|ETF1_MONPV|EARLY transcription factor 70 kDa|Monkeypox virus (MPXV)
Query: 1 IVGELVR 7
++GELVR
Sbjct: 542 LLGELVR 548
>sp|F13_MCV2|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 2
Query: 2 VGELVRNKP 10
VGEL KP
Sbjct: 109 VGELPGGKP 117
>sp|F13_MCV1|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 1
Query: 2 VGELVRNKP 10
VGEL KP
Sbjct: 109 VGELPGGKP 117
31|SequenceR|160|151|QQYRDIVGEL
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 2 QYRDIVGEL 10
YR I+GEL
Sbjct: 676 HYRKILGEL 684
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 2 QYRDIVGEL 10
QYRD G+L
Sbjct: 189 QYRDRRGDL 197
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 2 QYRDIVGEL 10
QYRD G+L
Sbjct: 189 QYRDRRGDL 197
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 QQYRDIVGEL 10
Q +DIVGE+
Sbjct: 221 QLLKDIVGEV 230
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 YRDIVGEL 10
YR I GEL
Sbjct: 683 YRKIYGEL 690
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 YRDIVGEL 10
YR I GEL
Sbjct: 683 YRKIYGEL 690
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 YRDIVGEL 10
YR I GEL
Sbjct: 683 YRKIYGEL 690
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 QQYRDIV 7
Q YRDI+
Sbjct: 265 QYYRDII 271
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 QYRDIV 7
QYRDI+
Sbjct: 1030 QYRDIL 1035
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 QYRDIV 7
QYRDI+
Sbjct: 1030 QYRDIL 1035
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 1 QQYRDIVGE 9
+QY+D+ E
Sbjct: 428 KQYKDVTAE 436
>sp|NEP_I73A4|NUCLEAR export protein|Influenza A virus (strain
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 38 YRDSLGE 44
>sp|PG001_MONPV|CHEMOKINE-BINDING protein|Monkeypox virus (MPXV)
Query: 3 YRDIVG 8
Y+DI+G
Sbjct: 180 YKDIIG 185
>sp|NEP_I80A2|NUCLEAR export protein|Influenza A virus (strain
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I78A3|NUCLEAR export protein|Influenza A virus (strain A/Mallard/New
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I59A0|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I18A0|NUCLEAR export protein|Influenza A virus (strain A/Brevig
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I70A0|NUCLEAR export protein|Influenza A virus (strain A/Qu/7/1970
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I68A4|NUCLEAR export protein|Influenza A virus (strain A/Hong
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I24A0|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Japan/1924
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 38 YRDSLGE 44
>sp|NEP_I01A3|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I97A1|NUCLEAR export protein|Influenza A virus (strain A/Hong
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I85A3|NUCLEAR export protein|Influenza A virus (strain
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I78A4|NUCLEAR export protein|Influenza A virus (strain A/Mallard/New
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I02A4|NUCLEAR export protein|Influenza A virus (strain A/Silky
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I02A3|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I02A2|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I02A1|NUCLEAR export protein|Influenza A virus (strain A/Guinea
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I02A0|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I83A8|NUCLEAR export protein|Influenza A virus (strain A/Hong
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I80A4|NUCLEAR export protein|Influenza A virus (strain A/Memphis/4/1980
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I78A8|NUCLEAR export protein|Influenza A virus (strain A/Memphis/18/1978
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I78A7|NUCLEAR export protein|Influenza A virus (strain A/Memphis/2/1978
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I77A4|NUCLEAR export protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I77A0|NUCLEAR export protein|Influenza A virus (strain A/Alaska/6/1977
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I76A6|NUCLEAR export protein|Influenza A virus (strain A/Memphis/110/1976
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I75A0|NUCLEAR export protein|Influenza A virus (strain A/Beijing/39/1975
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I73A5|NUCLEAR export protein|Influenza A virus (strain A/Port
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I72A4|NUCLEAR export protein|Influenza A virus (strain A/Memphis/101/1972
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I72A3|NUCLEAR export protein|Influenza A virus (strain A/Memphis/102/1972
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I72A2|NUCLEAR export protein|Influenza A virus (strain A/Udorn/307/1972
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I68A0|NUCLEAR export protein|Influenza A virus (strain A/Aichi/2/1968
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I67A2|NUCLEAR export protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I01A2|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I01A0|NUCLEAR export protein|Influenza A virus (strain A/Silky
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I68A5|NUCLEAR export protein|Influenza A virus (strain A/Korea/426/1968
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I00A0|NUCLEAR export protein|Influenza A virus (strain A/Duck/Hong
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I97A0|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I45A0|NUCLEAR export protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I43A0|NUCLEAR export protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I02A7|NUCLEAR export protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 31 YRDSLGE 37
>sp|NEP_I61A1|NUCLEAR export protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I56A3|NUCLEAR export protein|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I01A1|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I33A0|NUCLEAR export protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I05A1|NUCLEAR export protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 37 YRDSLGE 43
>sp|NEP_I69A0|NUCLEAR export protein|Influenza A virus (strain A/England/878/1969
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
>sp|NEP_I47A0|NUCLEAR export protein|Influenza A virus (strain A/Fort
Query: 3 YRDIVGE 9
YRD +GE
Sbjct: 41 YRDSLGE 47
32|SequenceR|165|156|AAAKSQQYRD
>sp|VE6_HPV57|PROTEIN E6|Human papillomavirus 57
Query: 1 AAAKSQQYR 9
AAAK +QYR
Sbjct: 68 AAAKLRQYR 76
33|SequenceR|170|161|LQCKLAAAKS
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 QCKLAAA 8
+CK+AAA
Sbjct: 1151 RCKVAAA 1157
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 QCKLAAA 8
+CK+AAA
Sbjct: 1151 RCKVAAA 1157
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 LQCKLAAA 8
L C++AAA
Sbjct: 856 LPCRVAAA 863
34|SequenceR|175|166|PAKECLQCKL
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 ECLQC 8
ECLQC
Sbjct: 134 ECLQC 138
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 ECLQC 8
ECLQC
Sbjct: 134 ECLQC 138
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 ECLQC 8
ECLQC
Sbjct: 134 ECLQC 138
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 3 KECLQC 8
KECL C
Sbjct: 722 KECLYC 727
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 KECLQC 8
KECL C
Sbjct: 722 KECLYC 727
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 PAKECLQC 8
P ++C++C
Sbjct: 1147 PYEQCVEC 1154
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 PAKECLQC 8
P ++C++C
Sbjct: 1147 PYEQCVEC 1154
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 PAKECLQC 8
P ++C QC
Sbjct: 1146 PYEQCPQC 1153
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 PAKECLQC 8
P ++C QC
Sbjct: 1146 PYEQCPQC 1153
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 2 AKECLQ 7
AKECL+
Sbjct: 306 AKECLE 311
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 2 AKECLQ 7
AKECL+
Sbjct: 306 AKECLE 311
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 2 AKECLQ 7
AKECL+
Sbjct: 306 AKECLE 311
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 2 AKECLQ 7
AKECL+
Sbjct: 306 AKECLE 311
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 2 AKECLQ 7
AKECL+
Sbjct: 306 AKECLE 311
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 3 KECLQCKL 10
K C CKL
Sbjct: 110 KHCTACKL 117
>sp|F13_MCV2|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 2
Query: 2 AKECLQC 8
A+ CL+C
Sbjct: 175 ARRCLRC 181
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 AKECLQC 8
A +CLQC
Sbjct: 945 ALKCLQC 951
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 4 ECLQCK 9
+CL CK
Sbjct: 272 QCLDCK 277
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 4 ECLQCK 9
+CL CK
Sbjct: 258 QCLDCK 263
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PAKECL 6
PAK CL
Sbjct: 819 PAKGCL 824
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PAKECL 6
PAK CL
Sbjct: 819 PAKGCL 824
>sp|CEP2_HHV6Z|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 PAKECLQCKL 10
P K C+ C++
Sbjct: 52 PKKYCMHCEM 61
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 3 KECLQCKL 10
K C +CKL
Sbjct: 246 KSCKKCKL 253
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 3 KECLQCKL 10
K C +CKL
Sbjct: 246 KSCKKCKL 253
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 3 KECLQCKL 10
K C +CKL
Sbjct: 246 KSCKKCKL 253
>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PAKECLQCKL 10
P K C+ C++
Sbjct: 52 PKKFCMHCEI 61
35|SequenceR|180|171|VTAEKPAKEC
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 1 VTAEKPAKEC 10
V E+P++EC
Sbjct: 12 VYGEEPSEEC 21
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 1 VTAEKPAKEC 10
V + KP+++C
Sbjct: 334 VASVKPSRKC 343
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 1 VTAEKPAKEC 10
V + KP+++C
Sbjct: 337 VASVKPSRKC 346
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VTAEKPAKEC 10
V E+P++EC
Sbjct: 12 VYGEEPSEEC 21
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 1 VTAEKPA 7
+T+EKPA
Sbjct: 334 LTSEKPA 340
36|SequenceR|185|176|CQECMVTAEK
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 CQECMVT 7
CQ+C++T
Sbjct: 847 CQQCLIT 853
>sp|HBSAG_HBVD4|LARGE envelope protein|Hepatitis B virus genotype D
Query: 1 CQECMVTAE 9
C+ CM TA+
Sbjct: 284 CRTCMTTAQ 292
>sp|HBSAG_HBVD3|LARGE envelope protein|Hepatitis B virus genotype D
Query: 1 CQECMVTAE 9
C+ CM TA+
Sbjct: 284 CRTCMTTAQ 292
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 1 CQECMVT 7
C++C+VT
Sbjct: 846 CKQCLVT 852
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 1 CQECMVT 7
C++C+VT
Sbjct: 846 CKQCLVT 852
>sp|HBSAG_HBVC9|LARGE envelope protein|Hepatitis B virus genotype C
Query: 1 CQECMVTAE 9
C+ C +TA+
Sbjct: 295 CRTCTITAQ 303
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 3 ECMVTAEK 10
ECM +AEK
Sbjct: 500 ECMNSAEK 507
Query: 3 ECMVTAEK 10
+C VTAEK
Sbjct: 782 DCPVTAEK 789
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 3 ECMVTAEK 10
EC +TAE+
Sbjct: 523 ECQMTAEQ 530
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 1 CQECMVTAEK 10
C +CM E+
Sbjct: 121 CHQCMTVVEE 130
37|SequenceR|190|181|CYFVDCQECM
>sp|US11_HCMVT|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain Towne)
Query: 2 YFVDCQEC 9
YF C +C
Sbjct: 128 YFSPCHQC 135
>sp|US11_HCMVM|MEMBRANE glycoprotein US11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 YFVDCQEC 9
YF C +C
Sbjct: 128 YFSPCHQC 135
>sp|US11_HCMVA|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 YFVDCQEC 9
YF C +C
Sbjct: 128 YFSPCHQC 135
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 5 DCQEC 9
DC EC
Sbjct: 919 DCTEC 923
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 YFVDCQECM 10
Y + C+ C+
Sbjct: 1295 YHITCKSCL 1303
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 YFVDCQECM 10
Y + C+ C+
Sbjct: 1295 YHITCKSCL 1303
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 YFVDCQEC 9
YF D Q C
Sbjct: 241 YFTDEQYC 248
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 YFVDCQEC 9
YF D Q C
Sbjct: 241 YFTDEQYC 248
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 6 CQECM 10
CQ+C+
Sbjct: 847 CQQCL 851
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 CYFVDCQ 7
CY D Q
Sbjct: 1116 CYLADAQ 1122
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 1 CYFVDCQ 7
CY D Q
Sbjct: 1111 CYLADAQ 1117
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 CYFVDCQ 7
CY D Q
Sbjct: 1116 CYLADAQ 1122
>sp|VE6_HPV65|PROTEIN E6|Human papillomavirus 65
Query: 1 CYFVDCQECM 10
CY+ C EC+
Sbjct: 55 CYYACCSECL 64
>sp|VE6_HPV04|PROTEIN E6|Human papillomavirus 4
Query: 1 CYFVDCQECM 10
CY+ C EC+
Sbjct: 55 CYYACCSECL 64
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 CYFVDCQEC 9
YF+ QEC
Sbjct: 6784 SYFITDQEC 6792
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 CYFVDCQEC 9
YF+ QEC
Sbjct: 6814 SYFITDQEC 6822
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 CYFVDCQEC 9
YF+ QEC
Sbjct: 6764 SYFITDQEC 6772
38|SequenceR|195|186|LRCPDCYFVD
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 LRCPDC 6
LRCP C
Sbjct: 1316 LRCPKC 1321
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 LRCPDCY 7
+ CP+CY
Sbjct: 451 IMCPNCY 457
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 LRCPDC 6
LRCP C
Sbjct: 1076 LRCPSC 1081
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 4 PDCYFVD 10
PDC F D
Sbjct: 1421 PDCKFYD 1427
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 4 PDCYFVD 10
PDC F D
Sbjct: 1418 PDCKFYD 1424
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 3 CPDCY 7
CPDC+
Sbjct: 1264 CPDCF 1268
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 3 CPDCY 7
CP+C+
Sbjct: 69 CPNCF 73
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 3 CPDCY 7
CP+C+
Sbjct: 62 CPNCF 66
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 3 CPDCYFV 9
CP+C+ V
Sbjct: 665 CPECHSV 671
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 1 LRCPDCYFV 9
LR P+ YF
Sbjct: 21 LRAPEGYFT 29
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 1 LRCPDCYFV 9
LR P+ YF
Sbjct: 21 LRAPEGYFT 29
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 1 LRCPDCYFV 9
LR P+ YF
Sbjct: 21 LRAPEGYFT 29
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 3 CPDC 6
CPDC
Sbjct: 344 CPDC 347
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 3 CPDC 6
CPDC
Sbjct: 344 CPDC 347
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 CPDC 6
CPDC
Sbjct: 344 CPDC 347
>sp|VNB_INBLE|GLYCOPROTEIN NB|Influenza B virus (strain B/Lee/1940)
Query: 1 LRCPDC 6
++CPDC
Sbjct: 60 IKCPDC 65
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 CPDC 6
CPDC
Sbjct: 343 CPDC 346
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 CPDC 6
CPDC
Sbjct: 343 CPDC 346
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 CPDC 6
CPDC
Sbjct: 343 CPDC 346
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 LRCPDC 6
LRC DC
Sbjct: 5009 LRCGDC 5014
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 3 CPDC 6
CPDC
Sbjct: 344 CPDC 347
Query: 2 RCPDC 6
RCP C
Sbjct: 803 RCPHC 807
>sp|VE2_HPV48|REGULATORY protein E2|Human papillomavirus type 48
Query: 6 CYFVD 10
CY+VD
Sbjct: 163 CYYVD 167
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 RCPDC 6
RC DC
Sbjct: 231 RCSDC 235
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 LRCPDC 6
LRC DC
Sbjct: 4984 LRCGDC 4989
Query: 3 CPDCY 7
C DCY
Sbjct: 4336 CSDCY 4340
>sp|ORF2_ZIKVK|UORF2 protein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 RCPDCYF 8
R PDC +
Sbjct: 19 RIPDCQY 25
>sp|ORF2_ZIKVF|UORF2 protein|Zika virus (isolate ZIKV/Human/French
Query: 2 RCPDCYF 8
R PDC +
Sbjct: 19 RIPDCQY 25
>sp|UL09_HCMVA|UNCHARACTERIZED protein UL9|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LRCPDCYFV 9
LR P CY V
Sbjct: 121 LRTPLCYNV 129
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 4 PDCYFVD 10
P C FVD
Sbjct: 288 PACAFVD 294
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LRCPDCYFVD 10
L+ PD FVD
Sbjct: 341 LKVPDREFVD 350
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LRCPDCYFVD 10
L+ PD FVD
Sbjct: 341 LKVPDREFVD 350
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 LRCPDC 6
L+CP C
Sbjct: 949 LQCPHC 954
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 4 PDCYFVD 10
P C FVD
Sbjct: 289 PACAFVD 295
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 4 PDCYFVD 10
P C FVD
Sbjct: 289 PACAFVD 295
>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)
Query: 4 PDCYFVD 10
P C FVD
Sbjct: 288 PACAFVD 294
>sp|UL24_HHV7J|PROTEIN UL24 homolog|Human herpesvirus 7 (strain JI)
Query: 2 RCPDCYFV 9
R PDC V
Sbjct: 63 RIPDCIIV 70
>sp|VE7_HPV05|PROTEIN E7|Human papillomavirus 5
Query: 1 LRCPDC 6
L CPDC
Sbjct: 89 LLCPDC 94
>sp|VE7_HPV5B|PROTEIN E7|Human papillomavirus type 5b
Query: 1 LRCPDC 6
L CPDC
Sbjct: 89 LLCPDC 94
>sp|VE7_HPV24|PROTEIN E7|Human papillomavirus 24
Query: 3 CPDC 6
CPDC
Sbjct: 83 CPDC 86
>sp|DUT_HHV8P|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 8 type P
Query: 2 RCPDCYFV 9
R P C F+
Sbjct: 57 RTPSCAFI 64
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 5 DCYF 8
DCYF
Sbjct: 311 DCYF 314
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 DCYF 8
DCYF
Sbjct: 311 DCYF 314
>sp|UL76_HCMVM|PROTEIN UL76|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RCPDCYFV 9
R PDC V
Sbjct: 76 RIPDCVLV 83
>sp|UL76_HCMVA|PROTEIN UL76|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RCPDCYFV 9
R PDC V
Sbjct: 76 RIPDCVLV 83
>sp|VE7_HPV20|PROTEIN E7|Human papillomavirus 20
Query: 1 LRCPDC 6
L CPDC
Sbjct: 88 LLCPDC 93
>sp|UL24_EBVB9|PROTEIN UL24 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 PDCYFVD 10
P CY V+
Sbjct: 88 PRCYIVE 94
>sp|NSS_SFSV|NON-STRUCTURAL protein NS-S|Sandfly fever sicilian virus (SFS)
Query: 4 PDCYF 8
P CYF
Sbjct: 82 PACYF 86
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 1 LRCPDCYFV 9
+R P CY V
Sbjct: 635 VRLPHCYKV 643
39|SequenceR|200|191|PPHCRLRCPD
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 PPHCRLRCP 9
P H R+ CP
Sbjct: 840 PKHVRVWCP 848
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 PPHCRLRCP 9
P H R+ CP
Sbjct: 840 PKHVRVWCP 848
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 PPHCRLRCP 9
P H R+ CP
Sbjct: 841 PKHVRVWCP 849
>sp|SPIKE_ADE31|FIBER protein|Human adenovirus A serotype 31
Query: 1 PPHCRLR 7
PP+C LR
Sbjct: 386 PPNCTLR 392
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 PPHCRLRCP 9
P H R+ CP
Sbjct: 841 PKHVRVWCP 849
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 PPHCRLRCP 9
P H R+ CP
Sbjct: 842 PKHIRVWCP 850
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 PPHCRLRCP 9
P H R+ CP
Sbjct: 842 PKHIRVWCP 850
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 PPHCRLRCP 9
P HC++R P
Sbjct: 490 PVHCKMREP 498
>sp|MC160_MCV1|PROTEIN MC160|Molluscum contagiosum virus subtype 1
Query: 1 PPHCRLRC 8
PP C RC
Sbjct: 122 PPSCTPRC 129
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 2 PHCRLRCP 9
PH +LR P
Sbjct: 854 PHLKLRLP 861
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 PPHCRLRCP 9
P H R CP
Sbjct: 845 PKHVRCWCP 853
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 2 PHCRLRCP 9
PH +LR P
Sbjct: 861 PHLKLRLP 868
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 2 PHCRLRCPD 10
P C+ CP+
Sbjct: 192 PWCKTGCPE 200
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 2 PHCRLRCPD 10
P C+ CP+
Sbjct: 192 PWCKTGCPE 200
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 CRLRCP 9
CRLR P
Sbjct: 200 CRLRVP 205
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 CRLRCP 9
CRLR P
Sbjct: 200 CRLRVP 205
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 CRLRCP 9
CRLR P
Sbjct: 200 CRLRVP 205
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 PPHCRLRCP 9
P HC +R P
Sbjct: 1821 PVHCEMREP 1829
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 PPHCRLRCP 9
P H R CP
Sbjct: 839 PKHIRCWCP 847
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PPHCRLRCPD 10
P H CPD
Sbjct: 418 PGHIMTNCPD 427
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PPHCRLRCPD 10
P H CPD
Sbjct: 418 PGHIMTNCPD 427
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 PPHCRLRCPD 10
P C LRC D
Sbjct: 222 PGLCLLRCND 231
>sp|HEMA_CVHN5|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N5)
Query: 2 PHCRLRC 8
PH R +C
Sbjct: 101 PHHRFKC 107
>sp|HEMA_CVHN2|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N2)
Query: 2 PHCRLRC 8
PH R +C
Sbjct: 101 PHHRFKC 107
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 HCRLR 7
HCRLR
Sbjct: 361 HCRLR 365
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 3 HCRLR 7
HCRLR
Sbjct: 361 HCRLR 365
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 3 HCRLRCPD 10
H R R PD
Sbjct: 284 HIRFRLPD 291
>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 HCRLR 7
HCRLR
Sbjct: 361 HCRLR 365
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 2 PHCRLRCP 9
PH RCP
Sbjct: 155 PHDFWRCP 162
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 CRLRCP 9
CR+R P
Sbjct: 200 CRIRVP 205
>sp|SPIKE_ADE12|FIBER protein|Human adenovirus A serotype 12
Query: 1 PPHCRL 6
PP+C L
Sbjct: 417 PPNCSL 422
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 PPHCRL 6
PP C L
Sbjct: 3163 PPECEL 3168
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 CRLRCP 9
CR+R P
Sbjct: 200 CRIRVP 205
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 PPHCRLRC 8
PP RL C
Sbjct: 533 PPTARLLC 540
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 3 HCRLRC 8
+CRL C
Sbjct: 215 NCRLNC 220
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 3 HCRLRCP 9
HC +CP
Sbjct: 1032 HCTGQCP 1038
>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)
Query: 2 PHCRL 6
PHC L
Sbjct: 521 PHCAL 525
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 2 PHCRL 6
PHC L
Sbjct: 523 PHCAL 527
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 2 PHCRL 6
PHC L
Sbjct: 516 PHCAL 520
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 2 PHCRL 6
PHC L
Sbjct: 516 PHCAL 520
>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 2 PHCRL 6
PHC L
Sbjct: 527 PHCAL 531
>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)
Query: 2 PHCRL 6
PHC L
Sbjct: 528 PHCAL 532
>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 2 PHCRL 6
PHC L
Sbjct: 523 PHCAL 527
>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)
Query: 2 PHCRL 6
PHC L
Sbjct: 519 PHCAL 523
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 2 PHCRL 6
PHC L
Sbjct: 521 PHCAL 525
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 1 PPHCRLRCP 9
PP RLR P
Sbjct: 673 PPDDRLRTP 681
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 1 PPHCRLRCP 9
PP RLR P
Sbjct: 673 PPDDRLRTP 681
>sp|L2MU_ADE12|LATE L2 mu core protein|Human adenovirus A serotype 12
Query: 4 CRLRCP 9
CR+R P
Sbjct: 5 CRMRIP 10
>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)
Query: 2 PHCRL 6
PHC L
Sbjct: 519 PHCAL 523
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 5 RLRCP 9
+LRCP
Sbjct: 621 KLRCP 625
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 PHCRLRCPD 10
P R+R PD
Sbjct: 306 PSARVRLPD 314
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 PHCRLRCPD 10
P R+R PD
Sbjct: 306 PSARVRLPD 314
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 PHCRLRCPD 10
P R+R PD
Sbjct: 306 PSARVRLPD 314
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 PHCRLRCPD 10
P R+R PD
Sbjct: 306 PSARVRLPD 314
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 PHCRLRCPD 10
P R+R PD
Sbjct: 306 PSARVRLPD 314
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 PHCRLRCPD 10
P R+R PD
Sbjct: 306 PSARVRLPD 314
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 PHCRLRCPD 10
P R+R PD
Sbjct: 306 PSARVRLPD 314
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 PHCRLRCPD 10
P R+R PD
Sbjct: 306 PSARVRLPD 314
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 PHCRLRCPD 10
P R+R PD
Sbjct: 306 PSARVRLPD 314
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 4 CRLRCPD 10
C+L CP+
Sbjct: 2118 CQLPCPE 2124
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 PPHCRLR 7
PP CR R
Sbjct: 25 PPRCRWR 31
>sp|HBSAG_HBVC7|LARGE envelope protein|Hepatitis B virus genotype C
Query: 1 PPHCRL 6
PPHC L
Sbjct: 69 PPHCSL 74
40|SequenceR|205|196|ALPGRPPHCR
>sp|SPIKE_ADE04|FIBER protein|Human adenovirus E serotype 4
Query: 3 PGRPPHCR 10
PGRP H +
Sbjct: 51 PGRPCHTK 58
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 6 PPHC 9
PPHC
Sbjct: 685 PPHC 688
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 6 PPHC 9
PPHC
Sbjct: 685 PPHC 688
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 6 PPHC 9
PPHC
Sbjct: 685 PPHC 688
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 6 PPHC 9
PPHC
Sbjct: 685 PPHC 688
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LPGRPPH 8
LPGRP H
Sbjct: 67 LPGRPSH 73
>sp|UL17_HCMVT|PROTEIN UL17|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 GRPPHCR 10
GRP HCR
Sbjct: 11 GRPRHCR 17
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 6 PPHC 9
PPHC
Sbjct: 685 PPHC 688
>sp|UL17_HCMVM|PROTEIN UL17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 GRPPHCR 10
GRP HCR
Sbjct: 11 GRPRHCR 17
>sp|UL17_HCMVA|UNCHARACTERIZED protein UL17|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 GRPPHCR 10
GRP HCR
Sbjct: 11 GRPRHCR 17
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 6 PPHC 9
PPHC
Sbjct: 1204 PPHC 1207
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 LPGRPP 7
LPG PP
Sbjct: 270 LPGGPP 275
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 6 PPHC 9
PPHC
Sbjct: 1204 PPHC 1207
>sp|AN_VZVD|ALKALINE nuclease|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PGRPPHC 9
P PPHC
Sbjct: 476 PTIPPHC 482
>sp|AN_VZVO|ALKALINE nuclease|Varicella-zoster virus (strain Oka vaccine)
Query: 3 PGRPPHC 9
P PPHC
Sbjct: 476 PTIPPHC 482
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 5 RPPHC 9
RPP C
Sbjct: 3162 RPPEC 3166
>sp|RPMS1_EBVB9|UNCHARACTERIZED protein RPMS1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 GRPPHCR 10
GRPPH R
Sbjct: 73 GRPPHSR 79
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 1 ALPGRPPHCR 10
A PG P H R
Sbjct: 200 AAPGTPAHVR 209
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 ALPGRPPHCR 10
A PG P H R
Sbjct: 200 AAPGTPAHVR 209
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 1 ALPGRPPH 8
A PG PPH
Sbjct: 754 ADPGSPPH 761
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 ALPGRPPHCR 10
A PG P H R
Sbjct: 200 AAPGTPAHVR 209
>sp|RPMS1_EBVG|UNCHARACTERIZED protein RPMS1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 GRPPHCR 10
GRPPH R
Sbjct: 73 GRPPHSR 79
>sp|YHR1_HCMVA|UNCHARACTERIZED protein HHRF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ALPGRPPHCR 10
ALP PP R
Sbjct: 106 ALPASPPRAR 115
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 3 PGRPPH 8
PG P H
Sbjct: 575 PGEPEH 580
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 LPGRPPH 8
+PG P H
Sbjct: 1770 IPGPPSH 1776
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 4 GRPPH 8
G PPH
Sbjct: 1519 GNPPH 1523
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PGRPPH 8
PG PP+
Sbjct: 3 PGLPPY 8
>sp|SPIK2_ADE40|FIBER protein 2|Human adenovirus F serotype 40
Query: 1 ALPGRPPH 8
A PG+P H
Sbjct: 368 AEPGKPFH 375
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 5 RPPHCR 10
RPP CR
Sbjct: 1313 RPPGCR 1318
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 5 RPPHCR 10
RPP CR
Sbjct: 1313 RPPGCR 1318
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 ALPGRPPHCR 10
ALPG CR
Sbjct: 1258 ALPGMYSPCR 1267
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 3 PGRPP 7
PG+PP
Sbjct: 749 PGQPP 753
>sp|SPIK2_ADE41|FIBER protein 2|Human adenovirus F serotype 41
Query: 1 ALPGRPPH 8
A PG+P H
Sbjct: 368 AEPGKPFH 375
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LPGRPPH 8
+PGR PH
Sbjct: 347 VPGRCPH 353
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LPGRPPH 8
+PGR PH
Sbjct: 347 VPGRCPH 353
41|SequenceR|210|201|VLRHKALPGR
>sp|VE2_HPV54|REGULATORY protein E2|Human papillomavirus type 54
Query: 1 VLRHKALPG 9
VL+H+ALP
Sbjct: 53 VLQHQALPA 61
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 3 RHKALPGR 10
RH+A PGR
Sbjct: 145 RHRAPPGR 152
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 3 RHKALPGR 10
RH+A PGR
Sbjct: 145 RHRAPPGR 152
>sp|UL26_HCMVA|TEGUMENT protein UL26|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VLRHKALPGR 10
+LRH+ PG+
Sbjct: 194 LLRHRVTPGK 203
>sp|UL26_HCMVM|TEGUMENT protein UL26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VLRHKALPGR 10
+LRH+ PG+
Sbjct: 194 LLRHRVTPGK 203
>sp|VE2_HPV60|REGULATORY protein E2|Human papillomavirus type 60
Query: 3 RHKALP 8
RH++LP
Sbjct: 301 RHRSLP 306
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 VLRHKALPG 9
VL H A PG
Sbjct: 1584 VLPHHAKPG 1592
>sp|B17_VARV|PROTEIN B17|Variola virus
Query: 4 HKALPG 9
HK +PG
Sbjct: 196 HKRIPG 201
>sp|B17_VAR67|PROTEIN B17|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 HKALPG 9
HK +PG
Sbjct: 196 HKRIPG 201
42|SequenceR|215|206|GQAPPVLRHK
>sp|VE2_HPV11|REGULATORY protein E2|Human papillomavirus 11
Query: 4 PPVLRHK 10
PP +RHK
Sbjct: 352 PPTIRHK 358
>sp|VE2_HPV6A|REGULATORY protein E2|Human papillomavirus type 6a
Query: 4 PPVLRHK 10
PP +RHK
Sbjct: 353 PPTIRHK 359
>sp|VE8E2_HPV11|PROTEIN E8^E2C|Human papillomavirus 11
Query: 4 PPVLRHK 10
PP +RHK
Sbjct: 162 PPTIRHK 168
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 QAPPVLR 8
Q PPV+R
Sbjct: 1437 QGPPVIR 1443
>sp|RP30_VAR67|DNA-DIRECTED RNA polymerase 30 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 PPVLRH 9
PP++RH
Sbjct: 180 PPLVRH 185
>sp|RP30_VACCC|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 PPVLRH 9
PP++RH
Sbjct: 180 PPLVRH 185
>sp|RP30_VACCA|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 4 PPVLRH 9
PP++RH
Sbjct: 180 PPLVRH 185
>sp|RP30_MONPV|DNA-DIRECTED RNA polymerase 30 kDa|Monkeypox virus (MPXV)
Query: 4 PPVLRH 9
PP++RH
Sbjct: 180 PPLVRH 185
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 4 PPVLRH 9
PP LRH
Sbjct: 262 PPKLRH 267
>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)
Query: 4 PPVLRH 9
PP+LRH
Sbjct: 240 PPLLRH 245
>sp|GL_HCMV2|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 1042) (HHV-5)
Query: 4 PPVLRH 9
PP+LRH
Sbjct: 240 PPLLRH 245
>sp|GL_HCMV7|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5160) (HHV-5)
Query: 4 PPVLRH 9
PP+LRH
Sbjct: 240 PPLLRH 245
>sp|GL_HCMVP|ENVELOPE glycoprotein L|Human cytomegalovirus (strain PT) (HHV-5)
Query: 4 PPVLRH 9
PP+LRH
Sbjct: 240 PPLLRH 245
>sp|GL_HCMVM|ENVELOPE glycoprotein L|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PPVLRH 9
PP+LRH
Sbjct: 240 PPLLRH 245
>sp|GL_HCMV8|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5508) (HHV-5)
Query: 4 PPVLRH 9
PP+LRH
Sbjct: 240 PPLLRH 245
>sp|GL_HCMV5|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5035) (HHV-5)
Query: 4 PPVLRH 9
PP+LRH
Sbjct: 240 PPLLRH 245
>sp|GL_HCMV4|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 4654) (HHV-5)
Query: 4 PPVLRH 9
PP+LRH
Sbjct: 240 PPLLRH 245
>sp|GL_HCMVA|ENVELOPE glycoprotein L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PPVLRH 9
PP+LRH
Sbjct: 240 PPLLRH 245
>sp|GL_HCMV6|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5040) (HHV-5)
Query: 4 PPVLRH 9
PP+LRH
Sbjct: 240 PPLLRH 245
>sp|GL_HCMV3|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 2387) (HHV-5)
Query: 4 PPVLRH 9
PP+LRH
Sbjct: 240 PPLLRH 245
>sp|ORF58_HHV8P|PROTEIN ORF58|Human herpesvirus 8 type P
Query: 2 QAPPVL 7
QAPP++
Sbjct: 128 QAPPIV 133
>sp|VP35_MABVA|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 GQAPPVLRHK 10
G PPV+R K
Sbjct: 278 GVVPPVIRVK 287
>sp|VP35_MABVM|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 GQAPPVLRHK 10
G PPV+R K
Sbjct: 278 GVVPPVIRVK 287
>sp|VP35_MABVP|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 GQAPPVLRHK 10
G PPV+R K
Sbjct: 278 GVVPPVIRVK 287
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 3 APPVLR 8
APP+LR
Sbjct: 859 APPILR 864
>sp|VP35_MABVO|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 GQAPPVLRHK 10
G PPV+R K
Sbjct: 278 GVVPPVIRVK 287
>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 APPVLR 8
APPV+R
Sbjct: 27 APPVVR 32
>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 APPVLR 8
APPV+R
Sbjct: 27 APPVVR 32
>sp|DNLI_VACCC|DNA ligase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 PVLRHK 10
PVL HK
Sbjct: 255 PVLSHK 260
>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)
Query: 5 PVLRHK 10
PVL HK
Sbjct: 255 PVLSHK 260
>sp|DNLI_MONPV|DNA ligase|Monkeypox virus (MPXV)
Query: 5 PVLRHK 10
PVL HK
Sbjct: 257 PVLSHK 262
>sp|VE2_HPV13|REGULATORY protein E2|Human papillomavirus 13
Query: 4 PPVLRHK 10
PP + HK
Sbjct: 362 PPTITHK 368
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 3 APPVLRH 9
APP+L H
Sbjct: 187 APPLLSH 193
>sp|VE2_HPV6B|REGULATORY protein E2|Human papillomavirus type 6b
Query: 4 PPVLRHK 10
PP + HK
Sbjct: 353 PPTISHK 359
>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 GQAPP 5
GQAPP
Sbjct: 156 GQAPP 160
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GQAPPV 6
GQ PPV
Sbjct: 298 GQTPPV 303
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 GQAPPV 6
GQ PPV
Sbjct: 299 GQTPPV 304
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GQAPPV 6
GQ PPV
Sbjct: 299 GQTPPV 304
>sp|TEG6_HHV11|TEGUMENT protein UL55|Human herpesvirus 1 (strain 17)
Query: 4 PPVLR 8
PPVLR
Sbjct: 93 PPVLR 97
>sp|TEG6_HHV1E|TEGUMENT protein UL55|Human herpesvirus 1 (strain HFEM)
Query: 4 PPVLR 8
PPVLR
Sbjct: 93 PPVLR 97
43|SequenceR|220|211|RRSVRGQAPP
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 RSVRGQA 8
RSVRG+A
Sbjct: 1824 RSVRGRA 1830
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 RSVRGQA 8
RSVRG+A
Sbjct: 1824 RSVRGRA 1830
>sp|UNG_HHV7J|URACIL-DNA glycosylase|Human herpesvirus 7 (strain JI)
Query: 3 SVRGQAPP 10
+VRG +PP
Sbjct: 105 TVRGCSPP 112
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 4 VRGQAP 9
VRGQAP
Sbjct: 143 VRGQAP 148
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 RSVRGQAPP 10
RSV G PP
Sbjct: 503 RSVLGYNPP 511
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 RSVRGQAPP 10
RSV G PP
Sbjct: 503 RSVLGYNPP 511
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 RSVRGQAPP 10
RSV G PP
Sbjct: 503 RSVLGYNPP 511
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 RSVRGQAPP 10
RSV G PP
Sbjct: 503 RSVLGYNPP 511
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 RSVRGQAPP 10
RSV G PP
Sbjct: 503 RSVLGYNPP 511
>sp|NCAP_CVHOC|NUCLEOPROTEIN coronavirus OC43 (HCoV-OC43)
Query: 4 VRGQAPP 10
V GQ PP
Sbjct: 81 VEGQGPP 87
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 1 RRSVRGQAP 9
RRS +GQ P
Sbjct: 507 RRSSQGQQP 515
44|SequenceR|225|216|KRPSLRRSVR
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 KRPSLRRS 8
KRP LR++
Sbjct: 1500 KRPELRKA 1507
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 2 RPSLRRSVR 10
RPS+RR+V+
Sbjct: 973 RPSVRRNVK 981
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 1 KRPSLRRSVR 10
KRP +R+S +
Sbjct: 493 KRPLVRKSSK 502
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 KRPSLRR 7
KRP +RR
Sbjct: 1651 KRPCIRR 1657
>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)
Query: 1 KRPSLRRS 8
+RP LRRS
Sbjct: 102 RRPPLRRS 109
45|SequenceR|230|221|TCTSVKRPSL
>sp|NEF_HV192|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 CTSVKRPSL 10
C++V RP++
Sbjct: 8 CSTVGRPAI 16
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 CTSVKRPS 9
CT KRP+
Sbjct: 60 CTQGKRPT 67
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 TSVKRP 8
TS+KRP
Sbjct: 224 TSIKRP 229
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 TSVKRP 8
TS+KRP
Sbjct: 224 TSIKRP 229
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 CTSVKR 7
C SVKR
Sbjct: 1800 CASVKR 1805
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 CTSVKR 7
C SVKR
Sbjct: 1800 CASVKR 1805
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 2 CTSVKR 7
CTSV+R
Sbjct: 644 CTSVRR 649
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 CTSVKR 7
CTSV+R
Sbjct: 648 CTSVRR 653
46|SequenceR|235|226|ELEHDTCTSV
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 2 LEHDTCTSV 10
LEH CT V
Sbjct: 590 LEHTLCTYV 598
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 HDTCTSV 10
HD+C S+
Sbjct: 505 HDSCPSI 511
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 2 LEHDTCTSV 10
LEH CT V
Sbjct: 588 LEHTLCTYV 596
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 EHDTCTSV 10
HD+C S+
Sbjct: 435 RHDSCPSI 442
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 LEHDTCTSV 10
HD CT V
Sbjct: 828 FNHDICTEV 836
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 LEHDTCTSV 10
HD CT V
Sbjct: 829 FNHDICTQV 837
>sp|VE2_HPV33|REGULATORY protein E2|Human papillomavirus 33
Query: 2 LEHDTCTSV 10
+E DTCT V
Sbjct: 140 IEEDTCTMV 148
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 1 ELEHDTCTSV 10
E+ D CTS+
Sbjct: 219 EVPLDICTSI 228
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LEHDTCTS 9
HDTC +
Sbjct: 388 FNHDTCAA 395
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LEHDTCTS 9
HDTC +
Sbjct: 388 FNHDTCAA 395
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 1 ELEHDTCT 8
EL+H T T
Sbjct: 178 ELQHQTST 185
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LEHDTCTS 9
L DTC S
Sbjct: 698 LSRDTCVS 705
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ELEHDTCTS 9
+LEHD S
Sbjct: 806 DLEHDRVVS 814
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ELEHDTCTS 9
+LEHD S
Sbjct: 804 DLEHDRVVS 812
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ELEHDTCTS 9
+LEHD S
Sbjct: 805 DLEHDRVVS 813
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 EHDTCTS 9
+H+TC S
Sbjct: 5006 KHETCCS 5012
47|SequenceR|240|231|YMSHNELEHD
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 SHNELEH 9
SHN EH
Sbjct: 198 SHNATEH 204
>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 YMSHN 5
YMSHN
Sbjct: 460 YMSHN 464
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 4 HNELEH 9
HNELE
Sbjct: 72 HNELEQ 77
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 4 HNELEH 9
HNELE
Sbjct: 72 HNELEQ 77
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 4 HNELEH 9
HNELE
Sbjct: 72 HNELEQ 77
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 4 HNELEH 9
HNELE
Sbjct: 72 HNELEQ 77
>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)
Query: 1 YMSHN 5
YMSHN
Sbjct: 460 YMSHN 464
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 YMSHNELEH 9
++SHNE+++
Sbjct: 355 FLSHNEVKN 363
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 YMSHNELEHD 10
Y+S NEL+ +
Sbjct: 2084 YLSFNELQSE 2093
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 1 YMSHNELEH 9
++SHNE+++
Sbjct: 355 FLSHNEVKN 363
>sp|CEP3_HCMVM|CYTOPLASMIC envelopment protein 3|Human cytomegalovirus (strain Merlin)
Query: 3 SHNELEHD 10
SH E HD
Sbjct: 80 SHREATHD 87
>sp|CEP3_HCMVA|CYTOPLASMIC envelopment protein 3|Human cytomegalovirus (strain AD169)
Query: 3 SHNELEHD 10
SH E HD
Sbjct: 80 SHREATHD 87
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 HNELE 8
HNELE
Sbjct: 72 HNELE 76
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 HNELE 8
HNELE
Sbjct: 72 HNELE 76
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 HNELE 8
HNELE
Sbjct: 72 HNELE 76
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 HNELE 8
HNELE
Sbjct: 72 HNELE 76
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 HNELE 8
HNELE
Sbjct: 72 HNELE 76
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 MSHNELEH 9
+SH+ L+H
Sbjct: 191 LSHSNLDH 198
>sp|US33_HCMVA|UNCHARACTERIZED protein HHLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 HNELEHD 10
H+EL HD
Sbjct: 76 HHELPHD 82
>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|GO_HHV6Z|130 kDa Glycoprotein O|Human herpesvirus 6B (strain Z29)
Query: 1 YMSHN 5
YMSHN
Sbjct: 436 YMSHN 440
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 4 HNELEHD 10
HN L HD
Sbjct: 541 HNILPHD 547
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 4 HNELEHD 10
HN L HD
Sbjct: 541 HNILPHD 547
>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I01A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 3 SHNELEH 9
+ NELEH
Sbjct: 272 NENELEH 278
>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Puerto
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Brevig
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Guinea
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEIE 638
>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEVE 638
>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 SHNELEH 9
SH+ +EH
Sbjct: 287 SHSRVEH 293
>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEVE 638
>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 YMSHNELE 8
++SH E+E
Sbjct: 631 FVSHKEVE 638
48|SequenceR|245|236|KCQVCYMSHN
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 CQVCYMS 8
C++CY S
Sbjct: 1177 CKICYSS 1183
>sp|TAT_HV1MN|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 CQVCY 6
CQVC+
Sbjct: 34 CQVCF 38
>sp|GO_HHV6Z|130 kDa Glycoprotein O|Human herpesvirus 6B (strain Z29)
Query: 6 YMSHN 10
YMSHN
Sbjct: 436 YMSHN 440
>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)
Query: 6 YMSHN 10
YMSHN
Sbjct: 460 YMSHN 464
>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)
Query: 6 YMSHN 10
YMSHN
Sbjct: 460 YMSHN 464
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 KCQVCYMSH 9
K + CYM+H
Sbjct: 190 KEKTCYMNH 198
>sp|TAT_HV1B5|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 CQVCYMS 8
CQVC+++
Sbjct: 34 CQVCFIT 40
>sp|TAT_HV1Y2|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 CQVCY 6
CQVC+
Sbjct: 34 CQVCF 38
>sp|KITH_YMTV5|THYMIDINE kinase|Yaba monkey tumor virus (strain
Query: 2 CQVCYMSHN 10
C+VCY N
Sbjct: 172 CRVCYFKIN 180
>sp|TAT_HV1BR|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 CQVCYMS 8
CQVC+ +
Sbjct: 34 CQVCFTT 40
>sp|UL131_HCMVA|UNCHARACTERIZED protein UL131|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 VCYMSHN 10
+C MSHN
Sbjct: 1 MCMMSHN 7
>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus
Query: 1 KCQVCYMSHN 10
K Q+C HN
Sbjct: 170 KGQICETVHN 179
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 KCQVCYMSH 9
K + CYM+H
Sbjct: 190 KEKTCYMNH 198
>sp|TAT_HV1SE|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 CQVCYMS 8
CQVC+++
Sbjct: 34 CQVCFLN 40
>sp|TAT_HV1S1|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 CQVCYMS 8
CQVC+++
Sbjct: 34 CQVCFIT 40
>sp|TAT_HV19N|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 CQVCYMS 8
CQVC+++
Sbjct: 34 CQVCFLN 40
>sp|TAT_HV1S3|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 CQVCYMS 8
CQVC+++
Sbjct: 34 CQVCFIT 40
>sp|KBZIP_HHV8P|E3 SUMO-protein ligase K-bZIP|Human herpesvirus 8 type P
Query: 1 KCQVCYMSHN 10
K +VC SH+
Sbjct: 207 KAEVCDQSHS 216
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 CYMSH 9
CYM+H
Sbjct: 190 CYMNH 194
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 CYMSH 9
CYM+H
Sbjct: 192 CYMNH 196
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 5 CYMSHN 10
CY HN
Sbjct: 255 CYARHN 260
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 CYMSH 9
CYM+H
Sbjct: 191 CYMNH 195
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 CYMSH 9
CYM+H
Sbjct: 199 CYMNH 203
>sp|TAT_HV1H2|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 CQVCYMS 8
CQVC+++
Sbjct: 34 CQVCFIT 40
>sp|TAT_HV112|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 CQVCYMS 8
CQVC+++
Sbjct: 34 CQVCFIT 40
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CQVC 5
CQVC
Sbjct: 285 CQVC 288
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CQVC 5
CQVC
Sbjct: 285 CQVC 288
>sp|TAT_HV1H3|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 CQVCYMS 8
CQVC+++
Sbjct: 34 CQVCFIT 40
>sp|TAT_HV1B1|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 CQVCYMS 8
CQVC+++
Sbjct: 34 CQVCFIT 40
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 5 CYMSH 9
CYMS+
Sbjct: 553 CYMSY 557
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 CYMSH 9
CYM+H
Sbjct: 200 CYMNH 204
>sp|PG083_VARV|CORE protease OPG082|Variola virus
Query: 5 CYMSH 9
CY+SH
Sbjct: 237 CYLSH 241
>sp|PG083_VAR67|CORE protease OPG082|Variola virus (isolate Human/India/Ind3/1967)
Query: 5 CYMSH 9
CY+SH
Sbjct: 237 CYLSH 241
>sp|PG083_VACCC|CORE protease OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 CYMSH 9
CY+SH
Sbjct: 237 CYLSH 241
>sp|AP3A_SARS|ORF3A protein|Severe acute respiratory syndrome coronavirus
Query: 4 VCYMSHN 10
VC+ +HN
Sbjct: 147 VCWHTHN 153
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 CYMSH 9
CYM H
Sbjct: 200 CYMRH 204
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 CYMSH 9
CYM H
Sbjct: 189 CYMRH 193
>sp|TAT_HV1JR|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 CQVCYMS 8
CQVC+ +
Sbjct: 34 CQVCFTT 40
>sp|M21_HMPVC|PROTEIN M2-1|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 KCQVCYMSHN 10
K CY HN
Sbjct: 91 KAAACYSLHN 100
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 CYMSH 9
CYM H
Sbjct: 3423 CYMHH 3427
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 KCQVCYMSH 9
K +C+ SH
Sbjct: 745 KVAICFGSH 753
>sp|M21_HRSV|PROTEIN M2-1|Human respiratory syncytial virus
Query: 5 CYMSHN 10
C+ SHN
Sbjct: 21 CHFSHN 26
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 VCYMSH 9
VC+ SH
Sbjct: 500 VCHQSH 505
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 VCYMSH 9
VC+ SH
Sbjct: 500 VCHQSH 505
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 VCYMSH 9
VC+ SH
Sbjct: 500 VCHQSH 505
>sp|M21_HRSVA|PROTEIN M2-1|Human respiratory syncytial virus A
Query: 5 CYMSHN 10
C+ SHN
Sbjct: 21 CHFSHN 26
>sp|TAT_HV1OY|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 CQVCYM 7
CQVC+
Sbjct: 34 CQVCFT 39
>sp|TAT_HV196|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 CQVCYM 7
CQ+C++
Sbjct: 34 CQICFL 39
49|SequenceR|250|241|YCVPMKCQVC
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 CVPMKCQV 9
CV MKC +
Sbjct: 109 CVAMKCNI 116
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 YCVPMKCQVC 10
YC+ C VC
Sbjct: 1677 YCLATGCVVC 1686
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 5 MKCQVC 10
M+CQ+C
Sbjct: 1234 MECQLC 1239
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 YCVPMKCQVC 10
+CVP +VC
Sbjct: 790 WCVPGGLEVC 799
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 YCVPMKCQVC 10
+CVP +VC
Sbjct: 790 WCVPGGLEVC 799
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 YCVPMKCQVC 10
+CVP +VC
Sbjct: 790 WCVPGGLEVC 799
>sp|U91_HHV6U|UNCHARACTERIZED protein U91|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CVPMKCQVC 10
C+ M C +C
Sbjct: 109 CIIMACIIC 117
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 CVPMKC 7
CV MKC
Sbjct: 108 CVTMKC 113
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 CVPMKC 7
CV MKC
Sbjct: 105 CVAMKC 110
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 5 MKCQVC 10
++CQ+C
Sbjct: 1234 LECQIC 1239
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 PMKCQV 9
P KCQV
Sbjct: 1848 PRKCQV 1853
>sp|US08_HCMVM|MEMBRANE glycoprotein US8|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CVPMKCQ 8
CVP KC+
Sbjct: 217 CVPQKCE 223
>sp|US08_HCMVA|UNIQUE short US8 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CVPMKCQ 8
CVP KC+
Sbjct: 217 CVPQKCE 223
>sp|PG089_VARV|PUTATIVE nuclease OPG089|Variola virus
Query: 3 VPMKCQV 9
VP+ CQ+
Sbjct: 339 VPLPCQL 345
>sp|PG089_VAR67|PUTATIVE nuclease OPG089|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 VPMKCQV 9
VP+ CQ+
Sbjct: 339 VPLPCQL 345
>sp|PG089_VACCC|PUTATIVE nuclease OPG089|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 VPMKCQV 9
VP+ CQ+
Sbjct: 339 VPLPCQL 345
>sp|PG089_MONPV|PUTATIVE nuclease OPG089|Monkeypox virus (MPXV)
Query: 3 VPMKCQV 9
VP+ CQ+
Sbjct: 339 VPLPCQL 345
>sp|LANA1_HHV8P|PROTEIN LANA1|Human herpesvirus 8 type P
Query: 1 YCVPMKCQ 8
YCV + CQ
Sbjct: 1067 YCVYVYCQ 1074
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVPMKC 7
CV +KC
Sbjct: 126 CVSLKC 131
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVPMKC 7
CV +KC
Sbjct: 126 CVSLKC 131
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVPMKC 7
CV +KC
Sbjct: 126 CVSLKC 131
>sp|PG055_VACCC|PROTEIN OPG055|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YCVPMKCQV 9
+C+P++ ++
Sbjct: 3 FCIPLRSKM 11
>sp|PG055_MONPV|PROTEIN OPG055|Monkeypox virus (MPXV)
Query: 1 YCVPMKCQV 9
+C+P++ ++
Sbjct: 3 FCIPLRSKM 11
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 CVPMKCQVC 10
CV K ++C
Sbjct: 613 CVSQKMKIC 621
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 2 CVPMKCQVC 10
CV K ++C
Sbjct: 613 CVSQKMKIC 621
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 5 MKCQVC 10
M+C +C
Sbjct: 554 MRCTIC 559
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 5 MKCQVC 10
M+C +C
Sbjct: 564 MRCTIC 569
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 5 MKCQVC 10
M+C +C
Sbjct: 564 MRCTIC 569
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 5 MKCQVC 10
M+C +C
Sbjct: 564 MRCTIC 569
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 5 MKCQVC 10
M+C +C
Sbjct: 564 MRCTIC 569
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 5 MKCQVC 10
M+C +C
Sbjct: 564 MRCTIC 569
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 5 MKCQVC 10
M+C +C
Sbjct: 564 MRCTIC 569
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 5 MKCQVC 10
M+C +C
Sbjct: 564 MRCTIC 569
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 5 MKCQVC 10
M+C +C
Sbjct: 564 MRCTIC 569
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 5 MKCQVC 10
M+C +C
Sbjct: 564 MRCTIC 569
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 5 MKCQVC 10
M+C +C
Sbjct: 564 MRCTIC 569
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 5 MKCQVC 10
M+C +C
Sbjct: 557 MRCTIC 562
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVPMKC 7
CV +KC
Sbjct: 126 CVSLKC 131
>sp|PAP1_VARV|POLY(A) polymerase catalytic subunit|Variola virus
Query: 3 VPMKC 7
+PMKC
Sbjct: 331 MPMKC 335
>sp|PAP1_VAR67|POLY(A) polymerase catalytic subunit|Variola virus (isolate
Query: 3 VPMKC 7
+PMKC
Sbjct: 331 MPMKC 335
>sp|PAP1_VACCT|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 3 VPMKC 7
+PMKC
Sbjct: 331 MPMKC 335
>sp|PAP1_VACCC|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Copenhagen)
Query: 3 VPMKC 7
+PMKC
Sbjct: 331 MPMKC 335
>sp|PAP1_VACCA|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 3 VPMKC 7
+PMKC
Sbjct: 331 MPMKC 335
>sp|PAP1_MONPV|POLY(A) polymerase catalytic subunit|Monkeypox virus (MPXV)
Query: 3 VPMKC 7
+PMKC
Sbjct: 331 MPMKC 335
>sp|PAP1_HSPV|POLY(A) polymerase catalytic subunit|Horsepox virus (HSPV)
Query: 3 VPMKC 7
+PMKC
Sbjct: 331 MPMKC 335
>sp|PAP1_CWPXG|POLY(A) polymerase catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 3 VPMKC 7
+PMKC
Sbjct: 331 MPMKC 335
>sp|PAP1_CWPXB|POLY(A) polymerase catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 3 VPMKC 7
+PMKC
Sbjct: 331 MPMKC 335
>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985
Query: 5 MKCQVC 10
M+C +C
Sbjct: 557 MRCTIC 562
>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985
Query: 5 MKCQVC 10
M+C +C
Sbjct: 557 MRCTIC 562
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVPMKC 7
CV +KC
Sbjct: 126 CVSLKC 131
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVPMKC 7
CV +KC
Sbjct: 126 CVSLKC 131
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 CVPMKCQ 8
CV KC+
Sbjct: 408 CVKFKCE 414
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 CVPMKC 7
CV M+C
Sbjct: 110 CVAMRC 115
>sp|PG055_VARV|PROTEIN OPG055|Variola virus
Query: 1 YCVPMKCQV 9
+C+P++ ++
Sbjct: 3 FCIPLRLKM 11
>sp|PG055_VAR67|PROTEIN OPG055|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 YCVPMKCQV 9
+C+P++ ++
Sbjct: 3 FCIPLRLKM 11
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 3 VPMKCQVC 10
VP++ +VC
Sbjct: 1876 VPLRYRVC 1883
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 3 VPMKCQVC 10
VP++ +VC
Sbjct: 1876 VPLRYRVC 1883
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 CVPMKCQV 9
CV M C +
Sbjct: 108 CVAMNCNI 115
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 CVPMKC 7
CV M+C
Sbjct: 107 CVAMRC 112
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 VPMKCQVC 10
VP+K VC
Sbjct: 6371 VPLKSAVC 6378
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 2 CVPMK 6
CVP+K
Sbjct: 399 CVPLK 403
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVPMKC 7
CV +KC
Sbjct: 126 CVNLKC 131
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 CVPMKCQVC 10
CV K ++C
Sbjct: 613 CVSQKMKLC 621
50|SequenceR|255|246|EELCQYCVPM
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 1 EELCQYCVPM 10
+EL YC P+
Sbjct: 384 DELPNYCFPL 393
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 1 EELCQYCVPM 10
+EL YC P+
Sbjct: 381 DELPNYCFPL 390
>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31
Query: 1 EELCQYCVPM 10
+EL YC P+
Sbjct: 280 DELPNYCFPL 289
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 1 EELCQYCVPM 10
+EL YC P+
Sbjct: 391 DELPNYCFPL 400
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 1 EELCQYCVPM 10
+EL YC P+
Sbjct: 376 DELPNYCFPL 385
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 1 EELCQYCVPM 10
+EL YC P+
Sbjct: 396 DELPNYCFPL 405
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 1 EELCQYCVPM 10
+EL YC P+
Sbjct: 325 DELPNYCFPL 334
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 1 EELCQYCVPM 10
+EL YC P+
Sbjct: 397 DELPNYCFPL 406
>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6
Query: 1 EELCQYCVPM 10
+EL YC P+
Sbjct: 297 DELPNYCFPL 306
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 1 EELCQYCVPM 10
+EL YC P+
Sbjct: 408 DELPNYCFPL 417
>sp|CAPSH_ADE04|HEXON protein|Human adenovirus E serotype 4
Query: 1 EELCQYCVPM 10
+EL YC P+
Sbjct: 290 DELPNYCFPL 299
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 1 EELCQYCVPM 10
+EL YC P+
Sbjct: 401 DELPNYCFPL 410
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 1 EELCQYCVPM 10
+EL YC P+
Sbjct: 420 DELPNYCFPL 429
>sp|CAPSH_ADE01|HEXON protein|Human adenovirus C serotype 1
Query: 1 EELCQYCVPM 10
+EL YC P+
Sbjct: 301 DELPNYCFPL 310
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 ELCQYC 7
ELC YC
Sbjct: 67 ELCFYC 72
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 ELCQYC 7
ELC YC
Sbjct: 67 ELCFYC 72
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 ELCQY------CVP 9
+LCQY CVP
Sbjct: 6477 QLCQYLNSTTMCVP 6490
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 4 CQYC 7
CQYC
Sbjct: 228 CQYC 231
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 4 CQYC 7
CQYC
Sbjct: 228 CQYC 231
>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus
Query: 1 EELCQYCVP 9
+ELCQ P
Sbjct: 256 DELCQMMYP 264
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 EELCQYC 7
EE+ QYC
Sbjct: 1471 EEVRQYC 1477
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 EELCQYC 7
EE+ QYC
Sbjct: 1471 EEVRQYC 1477
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 EELCQYC 7
EE+ QYC
Sbjct: 1471 EEVRQYC 1477
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 EELCQYC 7
EE+ QYC
Sbjct: 1471 EEVRQYC 1477
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 EELCQYC 7
EE+ QYC
Sbjct: 1471 EEVRQYC 1477
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 EELCQ 5
EELCQ
Sbjct: 620 EELCQ 624
>sp|VU8_HHV6Z|PROTEIN U8|Human herpesvirus 6B (strain Z29)
Query: 2 ELCQYC 7
ELC++C
Sbjct: 75 ELCRFC 80
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 2 ELCQYCVPM 10
ELC+ VP+
Sbjct: 886 ELCERSVPV 894
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 EELCQYCVP 9
+ C +C P
Sbjct: 1258 DNFCAFCTP 1266
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 EELCQYCVP 9
+ C +C P
Sbjct: 1288 DNFCAFCTP 1296
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 EELCQYCVP 9
+ C +C P
Sbjct: 1238 DNFCAFCTP 1246
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 EELCQYCVP 9
+ C +C P
Sbjct: 1288 DNFCAFCTP 1296
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 EELCQYCVP 9
+ C +C P
Sbjct: 1258 DNFCAFCTP 1266
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 EELCQYCVP 9
+ C +C P
Sbjct: 1238 DNFCAFCTP 1246
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ELCQY 6
E+CQY
Sbjct: 765 EICQY 769
>sp|PG107_VAR67|LATE protein H2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 EELCQYCV 8
++ CQY +
Sbjct: 145 QQFCQYLI 152
>sp|PG107_VACCC|PROTEIN H2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 EELCQYCV 8
++ CQY +
Sbjct: 145 QQFCQYLI 152
>sp|PG107_MONPV|MPXVGP092 virus (MPXV)
Query: 1 EELCQYCV 8
++ CQY +
Sbjct: 145 QQFCQYLI 152
>sp|H2_VARV|LATE protein H2|Variola virus
Query: 1 EELCQYCV 8
++ CQY +
Sbjct: 145 QQFCQYLI 152
>sp|H2_VACCA|LATE protein H2|Vaccinia virus (strain Ankara) (VACV)
Query: 1 EELCQYCV 8
++ CQY +
Sbjct: 145 QQFCQYLI 152
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 ELCQYCVP 9
++C C+P
Sbjct: 1535 DVCAVCLP 1542
>sp|NCAP_EBOZM|NUCLEOPROTEIN ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 EELCQYCV 8
EE+CQ +
Sbjct: 50 EEICQLII 57
>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 EELCQYCV 8
EE+CQ +
Sbjct: 50 EEICQLII 57
>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 EELCQYCV 8
EE+CQ +
Sbjct: 50 EEICQLII 57
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster
Query: 1 EELCQY 6
E+LC+Y
Sbjct: 62 EDLCRY 67
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster
Query: 1 EELCQY 6
E+LC+Y
Sbjct: 62 EDLCRY 67
>sp|UL05_HCMVA|PROTEIN UL5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 EELCQYCV 8
+ +C++C+
Sbjct: 138 QSICRFCI 145
>sp|NSP1_ROT41|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 3 LCQYCV 8
+CQ+C+
Sbjct: 62 VCQWCI 67
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 EELCQYC 7
EE+ +YC
Sbjct: 1459 EEIREYC 1465
>sp|PG060_MONPV|PROTEIN OPG060|Monkeypox virus (MPXV)
Query: 4 CQYCV 8
C+YC+
Sbjct: 113 CKYCI 117
>sp|UL05_HCMVM|PROTEIN UL5|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 EELCQYCV 8
+ +C++C+
Sbjct: 138 QSICRFCI 145
>sp|PG060_VACCC|PROTEIN OPG060|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 CQYCV 8
C+YC+
Sbjct: 113 CKYCI 117
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 ELCQY 6
+LCQY
Sbjct: 6847 QLCQY 6851
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 ELCQY 6
+LCQY
Sbjct: 6824 QLCQY 6828
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 ELCQY 6
+LCQY
Sbjct: 6824 QLCQY 6828
51|SequenceR|260|251|SSHKGEELCQ
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 SHKGEELCQ 10
SH G LC+
Sbjct: 519 SHGGHSLCE 527
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 HKGEELCQ 10
H G+ LCQ
Sbjct: 489 HLGQALCQ 496
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 3 HKGEELCQ 10
H G+ LCQ
Sbjct: 489 HLGQALCQ 496
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 2 SHKGEE 7
SH+GEE
Sbjct: 537 SHRGEE 542
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 SSHKGEEL 8
SSH G E+
Sbjct: 1753 SSHSGNEI 1760
>sp|BARF1_EBVG|SECRETED protein BARF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 SHKGEELCQ 10
SH G LC+
Sbjct: 97 SHDGNYLCR 105
>sp|BARF1_EBVB9|SECRETED protein BARF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 SHKGEELCQ 10
SH G LC+
Sbjct: 97 SHDGNYLCR 105
>sp|BARF1_EBVA8|SECRETED protein BARF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 SHKGEELCQ 10
SH G LC+
Sbjct: 97 SHDGNYLCR 105
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 1 SSHKGEEL 8
S+H G+EL
Sbjct: 657 SNHMGDEL 664
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SSHKGEEL 8
S+H G+EL
Sbjct: 657 SNHMGDEL 664
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 SSHKGEELCQ 10
S +KG CQ
Sbjct: 1764 SKYKGNPACQ 1773
>sp|ORF2_TTVB1|UNCHARACTERIZED ORF2 protein|Torque teno mini virus 1
Query: 4 KGEELC 9
KGE+LC
Sbjct: 47 KGEQLC 52
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 3 HKGEELCQ 10
H G+ LC+
Sbjct: 481 HLGQALCE 488
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 1 SSHKGEELC 9
S+ +GE++C
Sbjct: 661 SNLQGEDIC 669
>sp|UL92_HHV6Z|PROTEIN U63|Human herpesvirus 6B (strain Z29)
Query: 2 SHKGEELC 9
+HK ++C
Sbjct: 18 THKNNQMC 25
>sp|VLTF1_VAR67|LATE transcription factor 1|Variola virus (isolate
Query: 3 HKGEELC 9
HK EE C
Sbjct: 138 HKYEEKC 144
>sp|VLTF1_VACCC|LATE transcription factor 1|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 HKGEELC 9
HK EE C
Sbjct: 138 HKYEEKC 144
>sp|VLTF1_VACCA|LATE transcription factor 1|Vaccinia virus (strain Ankara) (VACV)
Query: 3 HKGEELC 9
HK EE C
Sbjct: 138 HKYEEKC 144
>sp|UL92_HHV6U|PROTEIN U63|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SHKGEELC 9
+HK ++C
Sbjct: 16 THKNNQMC 23
52|SequenceR|265|256|AKVEHSSHKG
>sp|KRB2_VACCC|PSEUDOKINASE OPG198|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 KVEHSSHK 9
K++H SHK
Sbjct: 45 KIDHKSHK 52
>sp|KRB2_VACCA|PSEUDOKINASE OPG198|Vaccinia virus (strain Ankara) (VACV)
Query: 2 KVEHSSHK 9
K++H SHK
Sbjct: 45 KIDHKSHK 52
>sp|KRB2_MONPV|PSEUDOKINASE OPG198|Monkeypox virus (MPXV)
Query: 2 KVEHSSHK 9
K++H SHK
Sbjct: 45 KIDHKSHK 52
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 AKVEHSSHK 9
AK+ H +HK
Sbjct: 765 AKIVHKAHK 773
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 AKVEHSSHK 9
AK+ H +HK
Sbjct: 837 AKIVHKAHK 845
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 AKVEHSSHK 9
AK+ H +HK
Sbjct: 837 AKIVHKAHK 845
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 AKVEHSSHK 9
AK+ H +HK
Sbjct: 837 AKIVHKAHK 845
>sp|VP40_EBORR|MATRIX protein VP40|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 VEHSSH 8
++HSSH
Sbjct: 59 IDHSSH 64
>sp|VP40_EBORE|MATRIX protein VP40|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 VEHSSH 8
++HSSH
Sbjct: 59 IDHSSH 64
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 HSSHKG 10
H+SH+G
Sbjct: 1610 HNSHEG 1615
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 HSSHKG 10
H+SH+G
Sbjct: 1610 HNSHEG 1615
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 1 AKVEHSSHK 9
AK+E SH+
Sbjct: 179 AKIEFISHR 187
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 2 KVEHSSH 8
KVEHS +
Sbjct: 223 KVEHSHY 229
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 2 KVEHSSH 8
+++HS+H
Sbjct: 1304 RIKHSTH 1310
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 3 VEHSSHK 9
+EH+ HK
Sbjct: 259 LEHAPHK 265
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 3 VEHSSHK 9
+EH+ HK
Sbjct: 259 LEHAPHK 265
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 AKVEHS 6
AK+EHS
Sbjct: 296 AKLEHS 301
53|SequenceR|270|261|WMAGLAKVEH
>sp|ORF10_HHV8P|PROTEIN ORF10|Human herpesvirus 8 type P
Query: 1 WMAGLAKVEH 10
W GL +++H
Sbjct: 384 WHVGLFQIKH 393
>sp|ORF3_TTVG1|UNCHARACTERIZED ORF3 protein|Torque teno midi virus 1
Query: 1 WMAGLA 6
WM+G+A
Sbjct: 24 WMSGIA 29
>sp|SHDAG_HDVWO|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 1 WMAGLAKVE 9
W+AG K+E
Sbjct: 20 WVAGRKKLE 28
>sp|SHDAG_HDVIT|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 1 WMAGLAKVE 9
W+AG K+E
Sbjct: 20 WVAGRKKLE 28
>sp|LHDAG_HDVWO|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 1 WMAGLAKVE 9
W+AG K+E
Sbjct: 20 WVAGRKKLE 28
>sp|LHDAG_HDVIT|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 1 WMAGLAKVE 9
W+AG K+E
Sbjct: 20 WVAGRKKLE 28
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 1 WMAGLAKVEH 10
W++ L VEH
Sbjct: 283 WVSRLTIVEH 292
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 1 WMAGLAKVEH 10
W+A L ++H
Sbjct: 297 WLAKLTMLDH 306
>sp|TEG6_HHV1E|TEGUMENT protein UL55|Human herpesvirus 1 (strain HFEM)
Query: 1 WMAGLAKVEH 10
WM A ++H
Sbjct: 152 WMGASAALQH 161
>sp|TEG6_HHV11|TEGUMENT protein UL55|Human herpesvirus 1 (strain 17)
Query: 1 WMAGLAKVEH 10
WM A ++H
Sbjct: 152 WMGASAALQH 161
>sp|SHDAG_HDVD3|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 1 WMAGLAKVE 9
W++G K+E
Sbjct: 20 WVSGRKKLE 28
>sp|SHDAG_HDVAM|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 1 WMAGLAKVE 9
W++G K+E
Sbjct: 20 WVSGRKKLE 28
>sp|LHDAG_HDVD3|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 1 WMAGLAKVE 9
W++G K+E
Sbjct: 20 WVSGRKKLE 28
>sp|LHDAG_HDVAM|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 1 WMAGLAKVE 9
W++G K+E
Sbjct: 20 WVSGRKKLE 28
>sp|HBSAG_HBVD4|LARGE envelope protein|Hepatitis B virus genotype D
Query: 1 WMAGLAKV 8
W AGL+ +
Sbjct: 345 WFAGLSPI 352
54|SequenceR|275|266|SKHLKWMAGL
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 1 SKHLKWMAG 9
+ HLKW G
Sbjct: 363 TSHLKWALG 371
>sp|VLTF1_VAR67|LATE transcription factor 1|Variola virus (isolate
Query: 3 HLKWMAGL 10
HL+W+ G
Sbjct: 151 HLEWLLGF 158
>sp|VLTF1_VACCC|LATE transcription factor 1|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 HLKWMAGL 10
HL+W+ G
Sbjct: 151 HLEWLLGF 158
>sp|VLTF1_VACCA|LATE transcription factor 1|Vaccinia virus (strain Ankara) (VACV)
Query: 3 HLKWMAGL 10
HL+W+ G
Sbjct: 151 HLEWLLGF 158
>sp|RL11_HCMVM|MEMBRANE glycoprotein RL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SKHLKWMAGL 10
S H W++GL
Sbjct: 182 SLHCAWVSGL 191
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 SKHLKWMAG 9
++ KWMAG
Sbjct: 224 TRQEKWMAG 232
>sp|UL33_HCMVA|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain AD169)
Query: 4 LKWMAGL 10
L W+AGL
Sbjct: 152 LTWLAGL 158
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 KHLKWMAGL 10
+H+ WM L
Sbjct: 2189 QHIMWMKNL 2197
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 KHLKWM 7
+HL WM
Sbjct: 2124 QHLMWM 2129
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 KHLKWM 7
+HL WM
Sbjct: 2115 QHLMWM 2120
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 KHLKWM 7
+HL WM
Sbjct: 2116 QHLMWM 2121
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 HLKWMA 8
HL+W A
Sbjct: 3102 HLQWFA 3107
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 HLKWMA 8
HL+W A
Sbjct: 3102 HLQWFA 3107
>sp|UL33_HCMVM|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain Merlin)
Query: 4 LKWMAGL 10
L W AGL
Sbjct: 153 LTWFAGL 159
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 6 WMAGL 10
WM+GL
Sbjct: 368 WMSGL 372
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 WMAGL 10
WM+GL
Sbjct: 368 WMSGL 372
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 WMAGL 10
WM+GL
Sbjct: 368 WMSGL 372
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 HLKWM 7
H++WM
Sbjct: 3125 HIQWM 3129
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 HLKWM 7
H++WM
Sbjct: 3125 HIQWM 3129
>sp|US25_HCMVA|UNCHARACTERIZED protein US25|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 KWMAG 9
KWM G
Sbjct: 124 KWMTG 128
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 2 KHLKWMAGL 10
K LK+ AGL
Sbjct: 124 KRLKYEAGL 132
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 HLKW 6
HLKW
Sbjct: 2067 HLKW 2070
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 HLKW 6
HLKW
Sbjct: 2067 HLKW 2070
>sp|DUT_HCMVM|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 1 SKHLKWMA 8
+KH+ W++
Sbjct: 123 NKHIIWLS 130
>sp|DUT_HCMVA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 1 SKHLKWMA 8
+KH+ W++
Sbjct: 123 NKHIIWLS 130
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 KHLKWMAGL 10
K LK+ AGL
Sbjct: 124 KKLKYEAGL 132
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 HLKW 6
HLKW
Sbjct: 2067 HLKW 2070
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 HLKW 6
HLKW
Sbjct: 2067 HLKW 2070
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 6 WMAGL 10
W+AGL
Sbjct: 437 WLAGL 441
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 6 WMAGL 10
W+AGL
Sbjct: 437 WLAGL 441
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 6 WMAGL 10
W+AGL
Sbjct: 437 WLAGL 441
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 SKHLKWMAG 9
++ KWM G
Sbjct: 224 TRQEKWMTG 232
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 SKHLKWMAG 9
++ KWM G
Sbjct: 224 TRQEKWMTG 232
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 SKHLKWMAG 9
++ KWM G
Sbjct: 224 TRQEKWMTG 232
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 SKHLKWMAG 9
++ KWM G
Sbjct: 224 TRQEKWMTG 232
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 6 WMAGL 10
W+AGL
Sbjct: 437 WLAGL 441
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 SKHLKWMAG 9
++ KWM G
Sbjct: 224 TRQEKWMTG 232
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 SKHLKWMAG 9
++ KWM G
Sbjct: 224 TRQEKWMTG 232
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 SKHLKWMAG 9
++ KWM G
Sbjct: 224 TRQEKWMTG 232
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 SKHLKWMAG 9
++ KWM G
Sbjct: 224 TRQEKWMTG 232
55|SequenceR|280|271|AQSLQSKHLK
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 1 AQSLQSKHLK 10
SLQSKH K
Sbjct: 200 GSSLQSKHCK 209
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 SLQSKHLK 10
+LQS HLK
Sbjct: 568 TLQSGHLK 575
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 1 AQSLQSKHLK 10
SLQSKH K
Sbjct: 200 GSSLQSKHRK 209
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 1 AQSLQSKHLK 10
SLQSKH K
Sbjct: 200 GSSLQSKHSK 209
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 1 AQSLQSKHLK 10
SLQSKH K
Sbjct: 200 GSSLQSKHRK 209
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 1 AQSLQSKHLK 10
SLQSKH K
Sbjct: 200 GSSLQSKHQK 209
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 1 AQSLQSKHLK 10
S+QSKH K
Sbjct: 210 GSSIQSKHQK 219
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 1 AQSLQSKHLK 10
S+QSKH K
Sbjct: 210 GSSIQSKHQK 219
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 1 AQSLQSKHLK 10
S+QSKH K
Sbjct: 210 GSSIQSKHQK 219
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 1 AQSLQSKHLK 10
S+QSKH K
Sbjct: 210 GSSIQSKHQK 219
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 1 AQSLQSKH 8
SLQSKH
Sbjct: 200 GSSLQSKH 207
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 1 AQSLQSKH 8
SLQSKH
Sbjct: 200 GSSLQSKH 207
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 AQSLQSKHL 9
AQ +QS HL
Sbjct: 662 AQPIQSSHL 670
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 1 AQSLQSKHLK 10
AQ+ Q+KH++
Sbjct: 352 AQNSQAKHVR 361
56|SequenceR|285|276|SLGNLAQSLQ
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SLGNLAQS 8
+LGNLA+S
Sbjct: 429 ALGNLAES 436
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 1 SLGNLAQS 8
+LGNLA+S
Sbjct: 429 ALGNLAES 436
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 1 SLGNLAQS 8
+LGNLA+S
Sbjct: 429 ALGNLAES 436
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 LGNLAQSLQ 10
+GNL QSL
Sbjct: 80 IGNLMQSLH 88
57|SequenceR|290|281|EKARDSLGNL
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EKARDSLGNL 10
+KARD+L NL
Sbjct: 2112 QKARDALDNL 2121
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EKARDSLGNL 10
+KARD+L NL
Sbjct: 2109 QKARDALDNL 2118
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EKARDSLGNL 10
+KARD+L NL
Sbjct: 2112 QKARDALDNL 2121
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EKARDSLGNL 10
+KARD+L NL
Sbjct: 2112 QKARDALDNL 2121
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EKARDSLGNL 10
+KARD+L NL
Sbjct: 2112 QKARDALDNL 2121
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 KARDSLG 8
KA+DSLG
Sbjct: 143 KAQDSLG 149
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 KARDSLG 8
KA+DSLG
Sbjct: 143 KAQDSLG 149
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 KARDSLG 8
KA+DSLG
Sbjct: 144 KAQDSLG 150
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 4 RDSLGNL 10
+D+LGNL
Sbjct: 1435 QDALGNL 1441
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 5 DSLGNL 10
D+LGNL
Sbjct: 428 DALGNL 433
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 DSLGNL 10
D+LGNL
Sbjct: 428 DALGNL 433
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 5 DSLGNL 10
D+LGNL
Sbjct: 428 DALGNL 433
58|SequenceR|295|286|LFEKAEKARD
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 1 LFEKAEKAR 9
+FE A KAR
Sbjct: 525 IFESASKAR 533
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 1 LFEKAEKAR 9
+FE A KAR
Sbjct: 525 IFESASKAR 533
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 FEKAEKAR 9
FEKAE+ +
Sbjct: 119 FEKAERLK 126
59|SequenceR|300|291|NRLQVLFEKA
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 NRLQVLFEK 9
+R+QV++EK
Sbjct: 168 SRIQVIYEK 176
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 1 NRLQVLFEK 9
+R+QV++EK
Sbjct: 168 SRIQVIYEK 176
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 NRLQVLFEK 9
+R+QV++EK
Sbjct: 168 SRIQVIYEK 176
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 1 NRLQVLFEK 9
+R+QV++EK
Sbjct: 171 SRIQVVYEK 179
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 RLQVLFEK 9
R+QV++EK
Sbjct: 168 RIQVVYEK 175
>sp|ORF10_HHV8P|PROTEIN ORF10|Human herpesvirus 8 type P
Query: 2 RLQVLFEK 9
R+Q+LFE+
Sbjct: 294 RIQLLFEQ 301
>sp|DUT_HHV6Z|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6B (strain
Query: 1 NRLQVL 6
NRLQVL
Sbjct: 355 NRLQVL 360
>sp|DUT_HHV6G|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 1 NRLQVL 6
NRLQVL
Sbjct: 355 NRLQVL 360
>sp|DUT_HHV6U|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 1 NRLQVL 6
NRLQVL
Sbjct: 355 NRLQVL 360
>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 NRLQVLFEKA 10
NR+Q+L + A
Sbjct: 3 NRVQILMKTA 12
>sp|PG056_VACCC|PROTEIN OPG056|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NRLQVLFEKA 10
NR+Q+L + A
Sbjct: 3 NRVQILMKTA 12
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 RLQVLFEKA 10
RL+V FE+A
Sbjct: 1780 RLEVDFEQA 1788
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 RLQVLFEKA 10
RL+V FE+A
Sbjct: 1780 RLEVDFEQA 1788
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 RLQVLFEKA 10
RL+V FE+A
Sbjct: 1780 RLEVDFEQA 1788
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 RLQVLFEKA 10
RL+V FE+A
Sbjct: 1780 RLEVDFEQA 1788
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 RLQVLFEKA 10
RL+V FE+A
Sbjct: 1780 RLEVDFEQA 1788
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 NRLQVLF 7
NR++VLF
Sbjct: 1866 NRVKVLF 1872
>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 1 NRLQVLFEK 9
N+L+ L+EK
Sbjct: 464 NKLKQLYEK 472
>sp|NSP1_ROTH6|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 1 NRLQVLFEK 9
N+L+ L+EK
Sbjct: 464 NKLKQLYEK 472
>sp|NSP1_ROTHD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 1 NRLQVLFEK 9
N+L+ L+EK
Sbjct: 464 NKLKQLYEK 472
60|SequenceR|305|296|IQQVMNRLQV
>sp|DUT_HHV6U|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 2 QQVMNRLQV 10
++ +NRLQV
Sbjct: 351 ERAINRLQV 359
>sp|DUT_HHV6G|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 2 QQVMNRLQV 10
++ +NRLQV
Sbjct: 351 ERAINRLQV 359
>sp|DUT_HHV6Z|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6B (strain
Query: 2 QQVMNRLQV 10
++ +NRLQV
Sbjct: 351 ERAINRLQV 359
>sp|US03_HCMVT|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 QQVMNRLQV 10
Q M+RLQV
Sbjct: 74 QSYMDRLQV 82
>sp|US03_HCMVM|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 QQVMNRLQV 10
Q M+RLQV
Sbjct: 74 QSYMDRLQV 82
>sp|US03_HCMVA|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 QQVMNRLQV 10
Q M+RLQV
Sbjct: 74 QSYMDRLQV 82
61|SequenceR|310|301|VSNEQIQQVM
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 VSNEQIQQ 8
+ N QIQQ
Sbjct: 653 IENSQIQQ 660
>sp|PG050_MONPV|PROTEIN OPG050|Monkeypox virus (MPXV)
Query: 1 VSNEQIQQ 8
+SNE I+Q
Sbjct: 58 ISNENIEQ 65
>sp|PG050_VACCP|PROTEIN OPG050|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 VSNEQIQQ 8
+SNE I+Q
Sbjct: 57 ISNENIEQ 64
>sp|PG050_VACCC|PROTEIN OPG050|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VSNEQIQQ 8
+SNE I+Q
Sbjct: 57 ISNENIEQ 64
>sp|PG050_VACCA|PROTEIN OPG050|Vaccinia virus (strain Ankara) (VACV)
Query: 1 VSNEQIQQ 8
+SNE I+Q
Sbjct: 57 ISNENIEQ 64
62|SequenceR|315|306|CAEFEVSNEQ
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 CAEFEV 6
C+EFEV
Sbjct: 848 CSEFEV 853
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 CAEFEV 6
C+EFEV
Sbjct: 848 CSEFEV 853
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 CAEFEV 6
C+EFEV
Sbjct: 848 CSEFEV 853
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 CAEFEV 6
C+EFEV
Sbjct: 848 CSEFEV 853
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 CAEFEV 6
C+EFEV
Sbjct: 848 CSEFEV 853
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 CAEFEV 6
C+EFEV
Sbjct: 848 CSEFEV 853
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 CAEFEVSNEQ 10
C +F + N+Q
Sbjct: 240 CIQFLIDNKQ 249
>sp|GM_HHV6Z|ENVELOPE glycoprotein M|Human herpesvirus 6B (strain Z29)
Query: 1 CAEFEVSN 8
CA FE+++
Sbjct: 44 CAYFEIND 51
>sp|GM_HHV6U|ENVELOPE glycoprotein M|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 CAEFEVSN 8
CA FE+++
Sbjct: 44 CAYFEIND 51
63|SequenceR|320|311|CQAVLCAEFE
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 CQAVLCAEF 9
CQ V CA++
Sbjct: 1194 CQMVSCAQY 1202
>sp|VU84_HHV7J|PROTEIN U84|Human herpesvirus 7 (strain JI)
Query: 1 CQAVLCAEF 9
C A LC +F
Sbjct: 256 CAAHLCVQF 264
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 4 VLCAEFE 10
V CA+FE
Sbjct: 392 VACAKFE 398
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 1 CQAVLCAEF 9
CQ +CA F
Sbjct: 234 CQDWVCAVF 242
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 1 CQAVLCAEF 9
CQ +CA F
Sbjct: 231 CQDWVCAVF 239
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 CQAVLC 6
C AVLC
Sbjct: 744 CLAVLC 749
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 CQAVLC 6
C AVLC
Sbjct: 744 CLAVLC 749
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 CQAVLC 6
C AVLC
Sbjct: 745 CLAVLC 750
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 CQAVLC 6
C AVLC
Sbjct: 745 CLAVLC 750
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 CQAVLC 6
C AVLC
Sbjct: 745 CLAVLC 750
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 CQAVLC 6
C AVLC
Sbjct: 745 CLAVLC 750
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 1 CQAVLC 6
CQ V+C
Sbjct: 1117 CQVVVC 1122
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 5 LCAEFE 10
+C+EFE
Sbjct: 847 VCSEFE 852
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 5 LCAEFE 10
+C+EFE
Sbjct: 847 VCSEFE 852
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 5 LCAEFE 10
+C+EFE
Sbjct: 847 VCSEFE 852
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 5 LCAEFE 10
+C+EFE
Sbjct: 847 VCSEFE 852
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 5 LCAEFE 10
+C+EFE
Sbjct: 847 VCSEFE 852
64|SequenceR|325|316|DILADCQAVL
>sp|E1BS_ADE12|E1B protein, small T-antigen|Human adenovirus A serotype 12
Query: 1 DILADCQAVL 10
+ILADC +L
Sbjct: 53 NILADCPGLL 62
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 DILADCQAV 9
D+L DC AV
Sbjct: 4467 DLLRDCDAV 4475
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 DILADC 6
DIL DC
Sbjct: 864 DILGDC 869
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 DILADC 6
DIL DC
Sbjct: 864 DILGDC 869
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 1 DILADCQAVL 10
D++ADC++ +
Sbjct: 110 DLVADCESYI 119
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 DILADCQA 8
DIL DC
Sbjct: 645 DILVDCSG 652
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 DILADCQ 7
DI+A CQ
Sbjct: 902 DIIARCQ 908
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 DILADCQ 7
DI+A CQ
Sbjct: 899 DIIARCQ 905
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 DILADCQAVL 10
D++ADC++ +
Sbjct: 110 DLVADCESYI 119
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 DILADCQA 8
D+L CQA
Sbjct: 76 DMLKGCQA 83
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 DILADCQAVL 10
DIL +C +L
Sbjct: 1142 DILKECMKLL 1151
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 DILADCQ 7
D++A CQ
Sbjct: 901 DVIARCQ 907
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 DILADCQ 7
D++A CQ
Sbjct: 918 DVIARCQ 924
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 DILADCQA 8
D+L CQA
Sbjct: 76 DMLRGCQA 83
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 DILADCQ 7
DI+ DC+
Sbjct: 1079 DIIDDCE 1085
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 DILADCQA 8
DI+ DC
Sbjct: 501 DIMVDCSG 508
65|SequenceR|330|321|RRNLADILAD
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 3 NLADILAD 10
NL+++LAD
Sbjct: 2015 NLSELLAD 2022
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 2 RNLADILAD 10
+N+A ILAD
Sbjct: 17 QNVAVILAD 25
66|SequenceR|335|326|LLQAKRRNLA
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 1 LLQAKRRNL 9
L +AKRRN+
Sbjct: 527 LTEAKRRNM 535
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 1 LLQAKRRNL 9
L +AKRRN+
Sbjct: 527 LTEAKRRNM 535
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 2 LQAKRR 7
LQAKRR
Sbjct: 114 LQAKRR 119
67|SequenceR|340|331|KNVRALLQAK
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 KNVRALLQ 8
KNV+ALL+
Sbjct: 668 KNVKALLE 675
>sp|UL33_HHV7J|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 7 (strain JI)
Query: 1 KNVRALLQAK 10
K +RAL Q+K
Sbjct: 234 KTLRALTQSK 243
>sp|VE7_HPV70|PROTEIN E7|Human papillomavirus type 70
Query: 1 KNVRALLQ 8
+N+R+LLQ
Sbjct: 84 ENLRSLLQ 91
68|SequenceR|345|336|KHEHEKNVRA
>sp|BVLF1_EBVB9|LATE gene expression regulator BVLF1|Epstein-Barr virus (strain B95-8)
Query: 3 EHEKNVRA 10
EHE VRA
Sbjct: 176 EHETRVRA 183
>sp|DUT_HHV8P|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 8 type P
Query: 1 KHEHEKN 7
KH HE N
Sbjct: 264 KHTHEDN 270
>sp|A18_YMTV5|TRANSCRIPT termination protein A18|Yaba monkey tumor virus (strain
Query: 3 EHEKNV 8
EH KNV
Sbjct: 70 EHSKNV 75
69|SequenceR|350|341|RVVKLKHEHE
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RVVKLKHEHE 10
R+ K+K EHE
Sbjct: 2771 RIEKIKQEHE 2780
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RVVKLKHEHE 10
R+ K+K EHE
Sbjct: 2768 RIEKIKQEHE 2777
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 RVVKLKHEHE 10
R+ K+K EHE
Sbjct: 2771 RIEKIKQEHE 2780
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RVVKLKHEHE 10
R+ K+K EHE
Sbjct: 2771 RIEKIKQEHE 2780
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RVVKLKHEHE 10
R+ K+K EHE
Sbjct: 2771 RIEKIKQEHE 2780
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RVVKLKHEHE 10
R+ K+K EHE
Sbjct: 2771 RIEKIKQEHE 2780
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RVVKLKHEHE 10
R+ K+K EHE
Sbjct: 2771 RIEKIKQEHE 2780
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 RVVKLKHEHE 10
R+ +KHEH+
Sbjct: 2771 RIENIKHEHK 2780
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 RVVKLKHEH 9
RV +LK EH
Sbjct: 2804 RVKRLKEEH 2812
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 RVVKLKHEHE 10
RV+K EHE
Sbjct: 244 RVIKRSPEHE 253
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 1 RVVKLKHEHE 10
RV+K EHE
Sbjct: 244 RVIKRSPEHE 253
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 RVVKLKHEH 9
RV +LK EH
Sbjct: 2789 RVERLKAEH 2797
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 RVVKLKHEHE 10
R+V KH H+
Sbjct: 786 RIVTEKHIHK 795
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 6 KHEHE 10
KH+HE
Sbjct: 100 KHQHE 104
>sp|PG055_VARV|PROTEIN OPG055|Variola virus
Query: 2 VVKLKH 7
+VKLKH
Sbjct: 122 LVKLKH 127
>sp|PG055_VAR67|PROTEIN OPG055|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 VVKLKH 7
+VKLKH
Sbjct: 122 LVKLKH 127
>sp|PG055_MONPV|PROTEIN OPG055|Monkeypox virus (MPXV)
Query: 2 VVKLKH 7
+VKLKH
Sbjct: 122 LVKLKH 127
>sp|PG055_VACCC|PROTEIN OPG055|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VVKLKH 7
+VKLKH
Sbjct: 122 LVKLKH 127
>sp|PG030_VARV|PROTEIN OPG030|Variola virus
Query: 4 KLKHEH 9
KLKHE+
Sbjct: 12 KLKHEN 17
>sp|PG030_VAR67|PROTEIN OPG030|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 KLKHEH 9
KLKHE+
Sbjct: 12 KLKHEN 17
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 4 KLKHEHE 10
K KH HE
Sbjct: 1197 KYKHVHE 1203
70|SequenceR|355|346|HSIQDRVVKL
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 HSIQDRVVKL 10
H +QD VKL
Sbjct: 2184 HRMQDSEVKL 2193
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 HSIQDRVVKL 10
H +QD VKL
Sbjct: 2184 HRMQDSEVKL 2193
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 HSIQDR 6
HS QDR
Sbjct: 2054 HSYQDR 2059
>sp|REV_HV1ND|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 1 HSIQDRVV 8
HSI +R++
Sbjct: 53 HSIGERII 60
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 HSIQDRVVKL 10
H +Q+R+ L
Sbjct: 2787 HDVQERIKAL 2796
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 1 HSIQDRVVKL 10
HS+QD +L
Sbjct: 329 HSLQDNQFEL 338
71|SequenceR|360|351|LKVTCHSIQD
>sp|MATRX_PI2HT|MATRIX protein|Human parainfluenza 2 virus (strain
Query: 3 VTCHSIQD 10
+ CH +QD
Sbjct: 298 IACHPLQD 305
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 3 VTCHSIQD 10
V CHS+++
Sbjct: 281 VACHSLRE 288
>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)
Query: 1 LKVTCHS 7
L+VTC S
Sbjct: 204 LRVTCQS 210
>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)
Query: 1 LKVTCHS 7
L+VTC S
Sbjct: 204 LRVTCQS 210
>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)
Query: 1 LKVTCHS 7
L+VTC S
Sbjct: 207 LRVTCQS 213
>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)
Query: 1 LKVTCHS 7
L+VTC S
Sbjct: 207 LRVTCQS 213
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LKVTCH 6
LKV CH
Sbjct: 456 LKVLCH 461
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LKVTCH 6
LKV CH
Sbjct: 456 LKVLCH 461
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LKVTCH 6
LKV CH
Sbjct: 456 LKVLCH 461
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 LKVTCHS 7
LKVTC++
Sbjct: 810 LKVTCNA 816
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 LKVTCHS 7
LKVTC++
Sbjct: 810 LKVTCNA 816
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 1 LKVTCHSI 8
+KVTC+++
Sbjct: 680 IKVTCNAV 687
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 3 VTCHSIQD 10
V+C SI+D
Sbjct: 171 VSCTSIED 178
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 LKVTCHSIQD 10
+KVT ++QD
Sbjct: 400 IKVTAGNVQD 409
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 LKVTCHSIQD 10
+KVT ++QD
Sbjct: 400 IKVTAGNVQD 409
>sp|NS1_HRSVB|NON-STRUCTURAL protein 1|Human respiratory syncytial virus B
Query: 1 LKVTCHS 7
LK+TC++
Sbjct: 25 LKITCYT 31
>sp|NS1_HRSV1|NON-STRUCTURAL protein 1|Human respiratory syncytial virus B
Query: 1 LKVTCHS 7
LK+TC++
Sbjct: 25 LKITCYT 31
>sp|NS1_HRSV|NON-STRUCTURAL protein 1|Human respiratory syncytial virus
Query: 1 LKVTCHS 7
LK+TC++
Sbjct: 25 LKITCYT 31
>sp|NS1_HRSVA|NON-STRUCTURAL protein 1|Human respiratory syncytial virus A
Query: 1 LKVTCHS 7
LK+TC++
Sbjct: 25 LKITCYT 31
>sp|NS1_HRSS2|NON-STRUCTURAL protein 1|Human respiratory syncytial virus A
Query: 1 LKVTCHS 7
LK+TC++
Sbjct: 25 LKITCYT 31
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 LKVTCHSI 8
+KV C+S+
Sbjct: 774 IKVVCNSV 781
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 1 LKVTCHSI 8
+KV C+S+
Sbjct: 774 IKVVCNSV 781
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 LKVTCHSI 8
+KV C+S+
Sbjct: 815 IKVVCNSV 822
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 LKVTCHSI 8
+KV C+S+
Sbjct: 815 IKVVCNSV 822
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 LKVTCHSI 8
+KV C+S+
Sbjct: 810 IKVVCNSV 817
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 LKVTCHSI 8
+KV C+S+
Sbjct: 810 IKVVCNSV 817
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 1 LKVTCHSI 8
+KV C+S+
Sbjct: 810 IKVVCNSV 817
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 LKVTCHSI 8
+KV C+S+
Sbjct: 810 IKVVCNSV 817
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 3 VTCHSIQD 10
V CH++++
Sbjct: 281 VACHALRE 288
72|SequenceR|365|356|GTTQRLKVTC
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 GTTQRLKVTC 10
GTTQ+ VTC
Sbjct: 410 GTTQKNYVTC 419
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 GTTQRLKV 8
GT+QRL V
Sbjct: 1442 GTSQRLDV 1449
73|SequenceR|370|361|CYEMLGTTQR
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 CYEMLGTTQR 10
C ++GTTQR
Sbjct: 3350 CNSLVGTTQR 3359
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 CYEMLGT 7
CY +LGT
Sbjct: 1300 CYTVLGT 1306
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 YEMLGTTQR 10
+EMLG+ +R
Sbjct: 1483 FEMLGSGRR 1491
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 CYEMLGTT 8
CY++ G T
Sbjct: 2612 CYDIFGVT 2619
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 CYEMLGTT 8
CY++ G T
Sbjct: 2612 CYDIFGVT 2619
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 YEMLGTTQR 10
Y M G+T+R
Sbjct: 386 YAMSGSTER 394
>sp|VP1_POVK6|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 60)
Query: 1 CYEMLGT 7
C +MLGT
Sbjct: 274 CADMLGT 280
>sp|VP1_POVK3|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 380)
Query: 1 CYEMLGT 7
C +MLGT
Sbjct: 274 CADMLGT 280
>sp|VP1_POVKI|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 350)
Query: 1 CYEMLGT 7
C +MLGT
Sbjct: 274 CADMLGT 280
>sp|VE6_HPV16|PROTEIN E6|Human papillomavirus type 16
Query: 1 CYEMLGTT 8
CY + GTT
Sbjct: 87 CYSLYGTT 94
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 2 YEMLGTTQR 10
YE+LG R
Sbjct: 454 YELLGLNAR 462
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 4 MLGTTQ 9
+LGTTQ
Sbjct: 272 LLGTTQ 277
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 CYEMLGTT 8
CYE G T
Sbjct: 328 CYETGGNT 335
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 CYEMLGTT 8
CYE G T
Sbjct: 328 CYETGGNT 335
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 3 EMLGTT 8
E+LGTT
Sbjct: 488 ELLGTT 493
74|SequenceR|375|366|KIVELCYEML
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 4 ELCYEML 10
++CYEML
Sbjct: 635 QMCYEML 641
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 KIVELCYEM 9
KI++LCY++
Sbjct: 290 KILDLCYQL 298
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IVELCYEM 9
+VE+C EM
Sbjct: 621 LVEICTEM 628
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IVELCYEM 9
+VE+C EM
Sbjct: 622 LVEICTEM 629
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IVELCYEM 9
+VE+C EM
Sbjct: 621 LVEICTEM 628
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IVELCYEM 9
+VE+C EM
Sbjct: 621 LVEICTEM 628
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IVELCYEM 9
+VE+C EM
Sbjct: 625 LVEICTEM 632
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IVELCYEM 9
+VE+C EM
Sbjct: 621 LVEICTEM 628
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IVELCYEM 9
+VE+C EM
Sbjct: 633 LVEICTEM 640
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IVELCYEM 9
+VE+C EM
Sbjct: 621 LVEICTEM 628
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IVELCYEM 9
+VE+C EM
Sbjct: 633 LVEICTEM 640
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IVELCYEM 9
+VE+C EM
Sbjct: 633 LVEICTEM 640
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IVELCYEM 9
+VE+C EM
Sbjct: 623 LVEICTEM 630
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IVELCYEM 9
+VE+C EM
Sbjct: 616 LVEICTEM 623
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 KIVELCY 7
KIV LCY
Sbjct: 3754 KIVLLCY 3760
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 KIVELCY 7
KIV LCY
Sbjct: 3754 KIVLLCY 3760
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 KIVELCYEML 10
KIV C++++
Sbjct: 2741 KIVSTCFKLM 2750
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 KIVELCYEML 10
KIV C++++
Sbjct: 2741 KIVSTCFKLM 2750
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 IVELCYEML 10
I +LCY+++
Sbjct: 903 IRQLCYDLV 911
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 IVELCYEML 10
I +LCY+++
Sbjct: 903 IRQLCYDLV 911
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 IVELCYEML 10
I +LCY+++
Sbjct: 903 IRQLCYDLV 911
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 IVELCYEML 10
I +LC EML
Sbjct: 3927 INKLCEEML 3935
>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus
Query: 1 KIVELCYEM 9
K+VEL YE+
Sbjct: 221 KLVELQYEV 229
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 IVELCYEML 10
I +LC EML
Sbjct: 3927 INKLCEEML 3935
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 2 IVELCY 7
++ELC+
Sbjct: 509 VIELCF 514
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 KIVELCYE 8
K++E C E
Sbjct: 1435 KVIEYCAE 1442
>sp|VE2_HPV51|REGULATORY protein E2|Human papillomavirus 51
Query: 4 ELCYEM 9
E CYE+
Sbjct: 96 ETCYEL 101
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 2 IVELCYEML 10
IV +C EM+
Sbjct: 587 IVSMCNEMV 595
75|SequenceR|380|371|SPDNEKIVEL
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 SPDNEKI 7
SPDNEKI
Sbjct: 530 SPDNEKI 536
>sp|VE7_HPV05|PROTEIN E7|Human papillomavirus 5
Query: 2 PDNEKI 7
PDNE+I
Sbjct: 43 PDNERI 48
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 1 SPDNEKIVEL 10
SPD EK++ +
Sbjct: 1011 SPDLEKLIRI 1020
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8])
Query: 1 SPDNEKIVEL 10
SPD EK++ +
Sbjct: 1011 SPDLEKLIRI 1020
>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 1 SPDNEKIVEL 10
SPD EK++ +
Sbjct: 1011 SPDLEKLIRI 1020
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 1 SPDNEKIVEL 10
SPD EK++ +
Sbjct: 1011 SPDLEKLIRI 1020
>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 SPDNEKIVEL 10
SPD EK++ +
Sbjct: 1011 SPDLEKLIRI 1020
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 SPDNEKIVEL 10
SPD EK++ +
Sbjct: 1011 SPDLEKLIRI 1020
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 SPDNEKIVEL 10
SPD EK++ +
Sbjct: 1011 SPDLEKLIRI 1020
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 1 SPDNEKIVEL 10
SPD EK++ +
Sbjct: 1011 SPDLEKLIRI 1020
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 SPDNEKIVEL 10
SPD EK++ +
Sbjct: 1011 SPDLEKLIRI 1020
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 SPDNEKIVEL 10
SPD EK++ +
Sbjct: 1011 SPDLEKLIRI 1020
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 SPDNEKIVEL 10
SPD EK++ +
Sbjct: 1011 SPDLEKLIRI 1020
>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 1 SPDNEKIVEL 10
SPD EK++ +
Sbjct: 1011 SPDLEKLIRI 1020
>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 SPDNEKIVEL 10
SPD EK++ +
Sbjct: 1011 SPDLEKLIRI 1020
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4])
Query: 1 SPDNEKIVEL 10
SPD EK++ +
Sbjct: 1011 SPDLEKLIRI 1020
>sp|E311_ADE06|EARLY E3A 11.6 kDa glycoprotein|Human adenovirus C serotype 6
Query: 1 SPDNEKIVEL 10
+P NEKI L
Sbjct: 79 NPHNEKIHRL 88
>sp|ADP_ADE02|ADENOVIRUS death protein|Human adenovirus C serotype 2
Query: 1 SPDNEKIVEL 10
+P NEKI L
Sbjct: 79 NPHNEKIHRL 88
>sp|UNG_HHV6U|URACIL-DNA glycosylase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PDNEKIVEL 10
PDN K+V L
Sbjct: 82 PDNVKVVIL 90
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SPDNEK 6
SPDNE+
Sbjct: 13 SPDNER 18
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SPDNEK 6
SPDNE+
Sbjct: 13 SPDNER 18
76|SequenceR|385|376|IQLFGSPDNE
>sp|NSS_HTRV|NON-STRUCTURAL protein NS-S|Heartland virus (HTRV)
Query: 1 IQLFGSPDN 9
+ LFG+P+N
Sbjct: 60 VWLFGNPNN 68
>sp|NSS_SFTSV|NON-STRUCTURAL protein NS-S|SFTS phlebovirus (isolate
Query: 1 IQLFGSPDN 9
+ LFG+P N
Sbjct: 60 VWLFGNPKN 68
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 4 FGSPDN 9
F SPDN
Sbjct: 239 FASPDN 244
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 4 FGSPDN 9
F SPDN
Sbjct: 239 FASPDN 244
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 1 IQLFGSPD 8
+ LFG+PD
Sbjct: 462 VLLFGAPD 469
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 FGSPDN 9
FG+PD+
Sbjct: 1641 FGAPDD 1646
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 FGSPDN 9
FG+PD+
Sbjct: 1641 FGAPDD 1646
>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 QLFGSPDNE 10
Q+FG DN+
Sbjct: 278 QIFGFNDND 286
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 3 LFGSPDN 9
LFG PD+
Sbjct: 222 LFGLPDS 228
>sp|LF2_EBVG|PROTEIN LF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 LFGSPDNE 10
FG+ DNE
Sbjct: 103 FFGAEDNE 110
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 1 IQLFGSPDNE 10
+ LFG PD E
Sbjct: 452 VLLFGVPDLE 461
>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 LFGSPDNE 10
FG+ DNE
Sbjct: 103 FFGAEDNE 110
>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 LFGSPDNE 10
FG+ DNE
Sbjct: 103 FFGAEDNE 110
>sp|ORF23_HHV8P|PROTEIN ORF23|Human herpesvirus 8 type P
Query: 4 FGSPDN 9
FG+PD+
Sbjct: 53 FGTPDS 58
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 IQLFGSPDN 9
+ L+G+ DN
Sbjct: 1612 VSLYGTKDN 1620
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 1 IQLFGSPD 8
I L+G PD
Sbjct: 456 ILLYGPPD 463
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 1 IQLFGSPD 8
I L+G PD
Sbjct: 474 IVLYGPPD 481
77|SequenceR|390|381|ILADSIQLFG
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 4 DSIQLFG 10
DS+ LFG
Sbjct: 2005 DSLNLFG 2011
>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain
Query: 1 ILADSIQL 8
++ADS+Q+
Sbjct: 302 VVADSLQM 309
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 1 ILADSIQL 8
++ADS+Q+
Sbjct: 302 VVADSLQM 309
>sp|GCVK_HHV7J|PROBABLE ganciclovir kinase|Human herpesvirus 7 (strain JI)
Query: 1 ILADSIQLFG 10
+LA+ + LFG
Sbjct: 449 VLAEHLVLFG 458
78|SequenceR|395|386|LHVRRILADS
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 LHVRRILADS 10
+H R+ LAD+
Sbjct: 1653 IHPRKYLADA 1662
>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LHVRRILA 8
+H RR+LA
Sbjct: 25 VHERRVLA 32
>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LHVRRILA 8
+H RR+LA
Sbjct: 25 VHERRVLA 32
>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LHVRRILA 8
+H RR+LA
Sbjct: 25 VHERRVLA 32
>sp|NS1_I96A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 HVRRILAD 9
HVR+ +AD
Sbjct: 17 HVRKQVAD 24
>sp|NS1_I07A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 HVRRILAD 9
HVR+ +AD
Sbjct: 17 HVRKQVAD 24
>sp|NS1_I96A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 HVRRILAD 9
HVR+ +AD
Sbjct: 17 HVRKQVAD 24
>sp|NS1_I00A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/New
Query: 2 HVRRILAD 9
HVR+ +AD
Sbjct: 17 HVRKQVAD 24
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 1 LHVRRILADS 10
LHV++ AD+
Sbjct: 71 LHVQQTCADA 80
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LHVRRI 6
LH+RRI
Sbjct: 448 LHLRRI 453
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LHVRRI 6
LH+RRI
Sbjct: 448 LHLRRI 453
>sp|NS1_I80AA|NON-STRUCTURAL protein 1|Influenza A virus (strain A/India/6263/1980
Query: 2 HVRRILAD 9
HVR+ +AD
Sbjct: 17 HVRKQVAD 24
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 LHVRRILAD 9
LHV +LAD
Sbjct: 589 LHVPFLLAD 597
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 LHVRRILAD 9
LHV +LAD
Sbjct: 589 LHVPFLLAD 597
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 LHVRRILAD 9
LHV +LAD
Sbjct: 588 LHVPFLLAD 596
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 LHVRRILAD 9
LHV +LAD
Sbjct: 589 LHVPFLLAD 597
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 LHVRRILAD 9
LHV +LAD
Sbjct: 589 LHVPFLLAD 597
>sp|NS1_I60A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Ann
Query: 2 HVRRILAD 9
HVR+ +AD
Sbjct: 17 HVRKQVAD 24
>sp|YVEC_VACCC|UNCHARACTERIZED 8.0 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LHVRRIL 7
HVRR+L
Sbjct: 5 FHVRRLL 11
>sp|NS1_I57A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Singapore/1/1957
Query: 2 HVRRILAD 9
HVR+ +AD
Sbjct: 17 HVRKQVAD 24
>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12
Query: 2 HVRRILAD 9
H+ R+L D
Sbjct: 429 HIHRVLND 436
>sp|NS1_I83A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chile/1/1983
Query: 2 HVRRILAD 9
HVR+ +AD
Sbjct: 17 HVRKQVAD 24
>sp|NS1_I77AB|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USSR/90/1977
Query: 2 HVRRILAD 9
HVR+ +AD
Sbjct: 17 HVRKQVAD 24
>sp|NS1_I77AA|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Brazil/11/1978
Query: 2 HVRRILAD 9
HVR+ +AD
Sbjct: 17 HVRKQVAD 24
>sp|NS1_I47A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Fort
Query: 2 HVRRILAD 9
HVR+ +AD
Sbjct: 17 HVRKRVAD 24
79|SequenceR|400|391|WQDETLHVRR
>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)
Query: 1 WQDETL 6
W+D+TL
Sbjct: 369 WEDQTL 374
>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)
Query: 1 WQDETL 6
W+D+TL
Sbjct: 374 WEDQTL 379
>sp|UL88_HHV7J|PROTEIN U59|Human herpesvirus 7 (strain JI)
Query: 1 WQDETLHV 8
W+D TL+V
Sbjct: 10 WKDCTLYV 17
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 QDETLHVRR 10
++ LHVRR
Sbjct: 1000 KNAALHVRR 1008
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 QDETLHVRR 10
++ LHVRR
Sbjct: 1022 KNAALHVRR 1030
>sp|GLYC_HRSV5|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 2 QDETLH 7
Q+ETLH
Sbjct: 261 QEETLH 266
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 QDETLHVRR 10
++ LHVRR
Sbjct: 995 KNAALHVRR 1003
>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 QDETLHVR 9
+DE LH R
Sbjct: 186 RDELLHTR 193
>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 QDETLHVR 9
+DE LH R
Sbjct: 186 RDELLHTR 193
>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 QDETLHVR 9
+DE LH R
Sbjct: 186 RDELLHTR 193
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 WQDETLHVRR 10
W DET+ R
Sbjct: 199 WADETVLTAR 208
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 WQDETLHVRR 10
W DET+ R
Sbjct: 199 WADETVLTAR 208
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 WQDETLHVRR 10
W DET+ R
Sbjct: 199 WADETVLTAR 208
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 WQDETLHVRR 10
W DET+ R
Sbjct: 199 WADETVLTAR 208
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 1 WQDETL 6
W D+TL
Sbjct: 317 WNDDTL 322
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 WQDETL 6
W D+TL
Sbjct: 640 WSDDTL 645
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 ETLHVRR 10
E LHVRR
Sbjct: 591 ERLHVRR 597
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 ETLHVRR 10
E LHVRR
Sbjct: 591 ERLHVRR 597
80|SequenceR|405|396|LTGKGWQDET
>sp|UL142_HCMVM|MEMBRANE glycoprotein UL142|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LTGKGWQD 8
LT GWQD
Sbjct: 151 LTSSGWQD 158
>sp|PKG3_ADE12|PACKAGING protein 3|Human adenovirus A serotype 12
Query: 1 LTGKGWQDET 10
LTG G +DE+
Sbjct: 325 LTGAGTEDES 334
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 TGKGWQD 8
+G+GW+D
Sbjct: 1557 SGEGWED 1563
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 TGKGWQD 8
+G+GW+D
Sbjct: 1557 SGEGWED 1563
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 TGKGWQD 8
+G+GW+D
Sbjct: 1557 SGEGWED 1563
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 TGKGWQD 8
+G+GW+D
Sbjct: 1557 SGEGWED 1563
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 TGKGWQD 8
+G+GW+D
Sbjct: 1557 SGEGWED 1563
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 1 LTGKGW 6
L+G+GW
Sbjct: 308 LSGEGW 313
>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)
Query: 1 LTGKGW 6
L+G+GW
Sbjct: 307 LSGEGW 312
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 1 LTGKGW 6
L+G+GW
Sbjct: 308 LSGEGW 313
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 3 GKGWQD 8
G GW D
Sbjct: 178 GAGWTD 183
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 3 GKGWQD 8
G GW D
Sbjct: 179 GAGWTD 184
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 1 LTGKGWQDE 9
L GW DE
Sbjct: 394 LLSGGWNDE 402
>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 LTGKGWQD 8
+TG+ W++
Sbjct: 326 ITGRAWEN 333
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 TGKGWQD 8
TG+ WQ+
Sbjct: 2090 TGEYWQE 2096
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 TGKGWQD 8
TG+ WQ+
Sbjct: 2090 TGEYWQE 2096
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 KGWQD 8
KGW D
Sbjct: 4197 KGWYD 4201
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 LTGKGWQ 7
LTG+ W+
Sbjct: 1197 LTGEKWE 1203
81|SequenceR|410|401|TMRPTLTGKG
>sp|BDLF3_EBVB9|GLYCOPROTEIN BDLF3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 TMRPTLTGKG 10
T+ PTL+ KG
Sbjct: 147 TLAPTLSSKG 156
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 MRPTLTG 8
MRP LTG
Sbjct: 1164 MRPDLTG 1170
>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12
Query: 1 TMRPTLTGK 9
T RP LTG+
Sbjct: 471 TTRPRLTGE 479
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 4 PTLTGK 9
P+LTGK
Sbjct: 1893 PSLTGK 1898
>sp|MCES_VARV|MRNA-CAPPING enzyme regulatory subunit|Variola virus
Query: 4 PTLTGKG 10
PTL G+G
Sbjct: 158 PTLFGRG 164
>sp|MCES_VAR67|MRNA-CAPPING enzyme regulatory subunit OPG124|Variola virus (isolate
Query: 4 PTLTGKG 10
PTL G+G
Sbjct: 158 PTLFGRG 164
>sp|MCES_VACCC|MRNA-CAPPING enzyme regulatory subunit OPG124|Vaccinia virus (strain Copenhagen)
Query: 4 PTLTGKG 10
PTL G+G
Sbjct: 158 PTLFGRG 164
>sp|MCES_VACCA|MRNA-CAPPING enzyme regulatory subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 4 PTLTGKG 10
PTL G+G
Sbjct: 158 PTLFGRG 164
>sp|MCES_MONPV|MRNA-CAPPING enzyme regulatory subunit OPG124|Monkeypox virus (MPXV)
Query: 4 PTLTGKG 10
PTL G+G
Sbjct: 158 PTLFGRG 164
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 MRPTLTG 8
++PTLTG
Sbjct: 1614 LKPTLTG 1620
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 MRPTLTG 8
++PTLTG
Sbjct: 1618 LKPTLTG 1624
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 MRPTLTG 8
++PTLTG
Sbjct: 1618 LKPTLTG 1624
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 MRPTLTG 8
++PTLTG
Sbjct: 1614 LKPTLTG 1620
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 MRPTLTG 8
++PTLTG
Sbjct: 1618 LKPTLTG 1624
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 MRPTLTG 8
++PTLTG
Sbjct: 1618 LKPTLTG 1624
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 MRPTLTG 8
++PTLTG
Sbjct: 1615 LKPTLTG 1621
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 MRPTLTG 8
++PTLTG
Sbjct: 1619 LKPTLTG 1625
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 MRPTLTG 8
++PTLTG
Sbjct: 1618 LKPTLTG 1624
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 MRPTLTG 8
++PTLTG
Sbjct: 1619 LKPTLTG 1625
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 MRPTLTG 8
++PTLTG
Sbjct: 1615 LKPTLTG 1621
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 MRPTLTG 8
+RP LTG
Sbjct: 1163 IRPDLTG 1169
82|SequenceR|415|406|LDFDTTMRPT
>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)
Query: 1 LDFDTTMRPT 10
L FD +RP+
Sbjct: 459 LTFDAALRPS 468
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 FDTTMR 8
F+TTMR
Sbjct: 451 FETTMR 456
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 FDTTMR 8
F+TTMR
Sbjct: 402 FETTMR 407
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 FDTTMR 8
F+TTMR
Sbjct: 682 FETTMR 687
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 FDTTMR 8
F+TTMR
Sbjct: 682 FETTMR 687
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 FDTTMR 8
F+TTMR
Sbjct: 582 FETTMR 587
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 FDTTMR 8
F+TTMR
Sbjct: 682 FETTMR 687
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 FDTTMR 8
F+TTMR
Sbjct: 682 FETTMR 687
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 FDTTMR 8
F+TTMR
Sbjct: 402 FETTMR 407
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 FDTTMR 8
F+TTMR
Sbjct: 682 FETTMR 687
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 FDTTMR 8
F+TTMR
Sbjct: 682 FETTMR 687
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 FDTTMR 8
F+TTMR
Sbjct: 682 FETTMR 687
>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)
Query: 1 LDFDTTMRPT 10
L FD +RP+
Sbjct: 459 LTFDGALRPS 468
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 DFDTTMR 8
+ DTTMR
Sbjct: 1205 NMDTTMR 1211
83|SequenceR|420|411|SNDLSLDFDT
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 3 DLSLDFD 9
D+SLD D
Sbjct: 1710 DISLDMD 1716
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 3 DLSLDFD 9
D+SLD D
Sbjct: 1710 DISLDMD 1716
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 DLSLDFD 9
D +LDFD
Sbjct: 2864 DRALDFD 2870
84|SequenceR|425|416|SQLLPSNDLS
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 3 LLPSNDLS 10
L P+NDL+
Sbjct: 1005 LRPTNDLT 1012
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 3 LLPSND 8
L+PSND
Sbjct: 390 LIPSND 395
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 LLPSND 8
L+PSND
Sbjct: 473 LVPSND 478
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 LLPSND 8
L+PSND
Sbjct: 472 LVPSND 477
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 LLPSND 8
L+PSND
Sbjct: 473 LVPSND 478
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 LLPSND 8
L+PSND
Sbjct: 472 LVPSND 477
>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 LLPSND 8
L+PSND
Sbjct: 473 LVPSND 478
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 LLPSND 8
L+PSND
Sbjct: 472 LVPSND 477
85|SequenceR|430|421|DLQHISQLLP
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 DLQHISQLL 9
D QH++Q L
Sbjct: 831 DFQHVAQTL 839
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 DLQHISQLL 9
D QH++Q L
Sbjct: 831 DFQHVAQTL 839
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 DLQHISQLL 9
D QH++Q L
Sbjct: 831 DFQHVAQTL 839
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 3 QHISQL 8
QHISQ+
Sbjct: 289 QHISQM 294
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 HISQLLP 10
H+S LLP
Sbjct: 400 HLSSLLP 406
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 HISQLLP 10
H+S LLP
Sbjct: 400 HLSSLLP 406
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 HISQLLP 10
H+S LLP
Sbjct: 400 HLSSLLP 406
86|SequenceR|435|426|KVQVFDLQHI
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 KVQVFDLQHI 10
KVQVF+ HI
Sbjct: 417 KVQVFEHPHI 426
>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VQVFDLQHI 10
+Q FD+QH+
Sbjct: 217 LQDFDVQHL 225
>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VQVFDLQHI 10
+Q FD+QH+
Sbjct: 217 LQDFDVQHL 225
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 KVQVFDLQH 9
+VQVFD QH
Sbjct: 2483 RVQVFD-QH 2490
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 KVQVFDLQHI 10
K QVF+ HI
Sbjct: 417 KAQVFEHPHI 426
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 KVQVFDLQHI 10
K QVF+ HI
Sbjct: 417 KAQVFEHPHI 426
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 1 KVQVFDLQHI 10
K QVF+ HI
Sbjct: 417 KAQVFEHPHI 426
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 KVQVFDLQHI 10
K QVF+ HI
Sbjct: 417 KAQVFEHPHI 426
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 KVQVFDLQHI 10
K QVF+ HI
Sbjct: 417 KAQVFEHPHI 426
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 KVQVFDLQHI 10
K QVF+ HI
Sbjct: 417 KAQVFEHPHI 426
>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United
Query: 1 KVQVFDLQH 9
+ Q FD+QH
Sbjct: 833 RSQQFDIQH 841
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 QVFDLQH 9
Q+F++QH
Sbjct: 961 QMFEVQH 967
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 QVFDLQH 9
Q+F++QH
Sbjct: 961 QMFEVQH 967
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 QVFDLQH 9
Q+F++QH
Sbjct: 961 QMFEVQH 967
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 KVQVFDLQHI 10
KV+V ++H+
Sbjct: 122 KVEVLKIEHV 131
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KVQVFDLQHI 10
+V VFD +H+
Sbjct: 374 EVIVFDAKHL 383
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KVQVFDLQHI 10
+V VFD +H+
Sbjct: 374 EVIVFDAKHL 383
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 5 FDLQHI 10
+DL+HI
Sbjct: 2789 YDLEHI 2794
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 QVFDLQH 9
+V+D+QH
Sbjct: 316 EVWDVQH 322
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 QVFDLQH 9
+V+D+QH
Sbjct: 316 EVWDVQH 322
>sp|VIF_HV2G1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 KVQVFDLQHI 10
KVQV LQ++
Sbjct: 142 KVQVPSLQYL 151
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 4 VFDLQH 9
+FDL+H
Sbjct: 58 LFDLEH 63
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 VFDLQH 9
+FDL+H
Sbjct: 58 LFDLEH 63
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 5 FDLQHI 10
FDL H+
Sbjct: 1290 FDLMHV 1295
87|SequenceR|440|431|VPSSAKVQVF
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 VPSSAKVQ 8
+PSSAK Q
Sbjct: 647 IPSSAKSQ 654
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 VPSSAK 6
VPSSAK
Sbjct: 1857 VPSSAK 1862
>sp|ORF4B_MERS1|NON-STRUCTURAL protein ORF4b|Middle East respiratory syndrome-related
Query: 1 VPSSAKVQVF 10
VPS++ QV+
Sbjct: 8 VPSTSGTQVY 17
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 PSSAKVQVF 10
P+SA VQ F
Sbjct: 735 PASALVQAF 743
>sp|VL2_HPVME|MINOR capsid protein L2|Human papillomavirus type ME180
Query: 1 VPSSAKVQV 9
PSS VQV
Sbjct: 144 TPSSGSVQV 152
88|SequenceR|445|436|IPTAPVPSSA
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 IPTAPVPSSA 10
+PT P+P+++
Sbjct: 1892 VPTQPLPNAS 1901
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 IPTAPVPSSA 10
+PT P+P+++
Sbjct: 1892 VPTQPLPNAS 1901
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 IPTAPV--PSS 9
+PTAPV PS+
Sbjct: 773 VPTAPVAKPST 783
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 IPTAPV--PSS 9
+PTAPV PS+
Sbjct: 773 VPTAPVAKPST 783
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin)
Query: 2 PTAPVPSSA 10
PT+P PS++
Sbjct: 26 PTSPAPSTS 34
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PTAPVPSSA 10
PT+P PS++
Sbjct: 26 PTSPAPSTS 34
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 IPTAPVPS 8
+PTA VPS
Sbjct: 3294 VPTAWVPS 3301
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 IPTAPVPS 8
+PTA VPS
Sbjct: 3294 VPTAWVPS 3301
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 PTAPVPS 8
P AP+PS
Sbjct: 720 PGAPIPS 726
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 IPTAPVP 7
+PT P P
Sbjct: 75 VPTDPTP 81
>sp|GL_HHV7J|ENVELOPE glycoprotein L|Human herpesvirus 7 (strain JI)
Query: 1 IPTAPVPSS 9
I AP+P S
Sbjct: 52 IDQAPIPKS 60
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 PTAPVP 7
PT PVP
Sbjct: 2097 PTPPVP 2102
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 PTAPVP 7
PT PVP
Sbjct: 2096 PTPPVP 2101
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 PTAPVP 7
PT PVP
Sbjct: 2096 PTPPVP 2101
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 PTAPVPSS 9
P PVP+S
Sbjct: 717 PGGPVPTS 724
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 PTAPVPSS 9
P PVP+S
Sbjct: 717 PGGPVPTS 724
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 PTAPVPSS 9
P APVP+S
Sbjct: 715 PGAPVPNS 722
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 IPTAPV 6
IPTAPV
Sbjct: 513 IPTAPV 518
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 3 TAPVPS 8
TAPVP+
Sbjct: 604 TAPVPT 609
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 3 TAPVPS 8
TAPVP+
Sbjct: 605 TAPVPT 610
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 IPTAPVPSS 9
IP P P+S
Sbjct: 19 IPVHPTPAS 27
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 IPTAPVPSS 9
IP P P+S
Sbjct: 19 IPVHPTPAS 27
>sp|GAG_HV1ET|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PTAPVPSS 9
PTAP P S
Sbjct: 463 PTAPPPES 470
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 3 TAPVPS 8
TAPVP+
Sbjct: 592 TAPVPT 597
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 3 TAPVPS 8
TAPVP+
Sbjct: 592 TAPVPT 597
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 3 TAPVPS 8
TAPVP+
Sbjct: 592 TAPVPT 597
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 3 TAPVPS 8
TAPVP+
Sbjct: 598 TAPVPT 603
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 3 TAPVPS 8
TAPVP+
Sbjct: 592 TAPVPT 597
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 3 TAPVPS 8
TAPVP+
Sbjct: 605 TAPVPT 610
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 3 TAPVPS 8
TAPVP+
Sbjct: 592 TAPVPT 597
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 3 TAPVPS 8
TAPVP+
Sbjct: 592 TAPVPT 597
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 3 TAPVPS 8
TAPVP+
Sbjct: 592 TAPVPT 597
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 3 TAPVPS 8
TAPVP+
Sbjct: 598 TAPVPT 603
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 3 TAPVPS 8
TAPVP+
Sbjct: 591 TAPVPT 596
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 3 TAPVPS 8
TAPVP+
Sbjct: 591 TAPVPT 596
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 3 TAPVPS 8
TAPVP+
Sbjct: 591 TAPVPT 596
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 3 TAPVPS 8
TAPVP+
Sbjct: 591 TAPVPT 596
>sp|HBSAG_HBVB2|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 1 IPTAPVPSS 9
+PTAP P+S
Sbjct: 77 VPTAPPPAS 85
89|SequenceR|450|441|EELQLIPTAP
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 EELQLIPTAP 10
EE+QLI AP
Sbjct: 1579 EEVQLIAAAP 1588
Query: 1 EELQLIPT 8
EELQ IPT
Sbjct: 1663 EELQEIPT 1670
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 EELQLIPT 8
EELQ IPT
Sbjct: 1663 EELQEIPT 1670
Query: 1 EELQLIPTAP 10
EE+QLI P
Sbjct: 1579 EEVQLIAAVP 1588
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 EELQLIPT 8
EELQ IPT
Sbjct: 1663 EELQEIPT 1670
Query: 1 EELQLIPTAP 10
EE+QLI P
Sbjct: 1579 EEVQLIAAVP 1588
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 EELQLIPT 8
EELQ IPT
Sbjct: 1663 EELQEIPT 1670
Query: 1 EELQLIPTAP 10
EE+QLI P
Sbjct: 1579 EEVQLIAAVP 1588
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 EELQLIPT 8
EELQ IPT
Sbjct: 1663 EELQEIPT 1670
Query: 1 EELQLIPTAP 10
EE+QLI P
Sbjct: 1579 EEVQLIAAVP 1588
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 EELQLIPT 8
EELQ IPT
Sbjct: 1663 EELQEIPT 1670
Query: 1 EELQLIPTAP 10
EE+QLI P
Sbjct: 1579 EEVQLIAAVP 1588
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 EELQLIPT 8
EELQ IPT
Sbjct: 1663 EELQEIPT 1670
Query: 1 EELQLIPTAP 10
EE+QLI P
Sbjct: 1579 EEVQLIAAVP 1588
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 EELQLIPT 8
EELQ IPT
Sbjct: 1663 EELQEIPT 1670
Query: 1 EELQLIPTAP 10
EE+QLI P
Sbjct: 1579 EEVQLIAAVP 1588
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 EELQLIPTAP 10
EE+Q+I AP
Sbjct: 1592 EEVQMIAVAP 1601
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 EELQLIPTAP 10
EE+QLI +P
Sbjct: 1573 EEVQLIAVSP 1582
Query: 1 EELQLIPT 8
E+LQ IPT
Sbjct: 1658 EQLQDIPT 1665
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 EELQLIPTAP 10
EE+QLI P
Sbjct: 1579 EEVQLIAAVP 1588
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 EELQLIPTAP 10
EE+QLI P
Sbjct: 1590 EEVQLIAAEP 1599
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 ELQLIPTAP 10
E ++IPT+P
Sbjct: 75 EKKVIPTSP 83
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 EELQLIPTAP 10
EE+QLI P
Sbjct: 1585 EEVQLIALEP 1594
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 5 LIPTAP 10
LIPTAP
Sbjct: 512 LIPTAP 517
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 5 LIPTAP 10
LIPTAP
Sbjct: 454 LIPTAP 459
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 5 LIPTAP 10
LIPTAP
Sbjct: 455 LIPTAP 460
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 EELQLIPTAP 10
+ + L+PT P
Sbjct: 1887 QPIDLVPTQP 1896
>sp|VL2_HPV41|MINOR capsid protein L2|Human papillomavirus type 41
Query: 1 EELQLIPTAP 10
EE+ L+P AP
Sbjct: 102 EEIPLLPMAP 111
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 EELQLIPTAP 10
EE+Q+I P
Sbjct: 1590 EEVQMIAVEP 1599
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 EELQLIPTAP 10
+ + L+PT P
Sbjct: 1887 QPIDLVPTQP 1896
>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 EELQLIPTAP 10
+EL +IP AP
Sbjct: 327 QELAIIPPAP 336
>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 EELQLIPTAP 10
+EL +IP AP
Sbjct: 327 QELAVIPPAP 336
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 1 EELQLIP 7
EEL L+P
Sbjct: 194 EELSLVP 200
90|SequenceR|455|446|NHTCCEELQL
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 HTCCEELQL 10
H CCE + L
Sbjct: 75 HNCCEYIPL 83
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 2 HTCCE 6
H CCE
Sbjct: 67 HDCCE 71
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 2 HTCCE 6
H CCE
Sbjct: 67 HDCCE 71
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 2 HTCCEE 7
H CC+E
Sbjct: 1331 HNCCDE 1336
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 2 HTCCEE 7
H CC+E
Sbjct: 1331 HNCCDE 1336
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 2 HTCCEE 7
H CC+E
Sbjct: 1336 HNCCDE 1341
>sp|NSP6_ROTH7|NON-STRUCTURAL protein 6|Rotavirus A (isolate RVA/Human/United
Query: 3 TCCEELQ 9
TCC+ LQ
Sbjct: 32 TCCQSLQ 38
>sp|NSP6_ROTH3|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 3 TCCEELQ 9
TCC+ LQ
Sbjct: 32 TCCQSLQ 38
>sp|NSP6_ROTHD|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/United
Query: 3 TCCEELQ 9
TCC+ LQ
Sbjct: 32 TCCQNLQ 38
>sp|NSP6_ROTHB|NON-STRUCTURAL protein 6|Rotavirus A (strain
Query: 3 TCCEELQ 9
TCC+ LQ
Sbjct: 32 TCCQNLQ 38
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 TCCE 6
TCCE
Sbjct: 1111 TCCE 1114
>sp|NSP6_ROT41|NON-STRUCTURAL protein 6|Rotavirus A (isolate
Query: 3 TCCEELQ 9
TCC+ LQ
Sbjct: 32 TCCQNLQ 38
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 NHTCCEEL 8
NH C E+
Sbjct: 834 NHNICTEV 841
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 NHTCCEEL 8
NH C E+
Sbjct: 833 NHNICTEV 840
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 1 NHTCCEELQL 10
NH E+L L
Sbjct: 34 NHRVAEDLNL 43
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 1 NHTCCEELQL 10
NH E+L L
Sbjct: 34 NHRVAEDLNL 43
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 NHTCCEELQL 10
NH E+L L
Sbjct: 34 NHRVAEDLNL 43
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 NHTCCEELQL 10
NH E+L L
Sbjct: 34 NHRVAEDLNL 43
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 1 NHTCCEELQL 10
NH E+L L
Sbjct: 34 NHRVAEDLNL 43
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 1 NHTCCEELQL 10
NH E+L L
Sbjct: 34 NHRVAEDLNL 43
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 1 NHTCCEELQL 10
NH+ CE+ L
Sbjct: 357 NHSICEKKTL 366
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 NHTCCEELQL 10
NH+ CE+ L
Sbjct: 357 NHSICEKKTL 366
91|SequenceR|460|451|LTASNNHTCC
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 5 NNHTCC 10
NN TCC
Sbjct: 196 NNKTCC 201
>sp|NEF_HV1ND|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 TASNNHTC 9
TAS N TC
Sbjct: 48 TASTNDTC 55
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 5 NNHTCC 10
NN+ CC
Sbjct: 1437 NNYDCC 1442
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 LTASNNHTC 9
L ASN TC
Sbjct: 679 LDASNGPTC 687
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 LTASNNHTC 9
L ASN TC
Sbjct: 679 LDASNGPTC 687
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 LTASNNHTC 9
L ASN TC
Sbjct: 679 LDASNGPTC 687
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 5 NNHTCC 10
NN+ CC
Sbjct: 1417 NNYDCC 1422
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 5 NNHTCC 10
NN+ CC
Sbjct: 1467 NNYDCC 1472
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 5 NNHTCC 10
NN+ CC
Sbjct: 1437 NNYDCC 1442
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 1 LTASNNHTC 9
L N HTC
Sbjct: 316 LAEENVHTC 324
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 5 NNHTCC 10
NN+ CC
Sbjct: 1417 NNYDCC 1422
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 5 NNHTCC 10
NN+ CC
Sbjct: 1467 NNYDCC 1472
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 3 ASNNHT 8
++NNHT
Sbjct: 453 STNNHT 458
>sp|ORF27_HHV8P|PROTEIN ORF27|Human herpesvirus 8 type P
Query: 2 TASNNHT 8
TAS NHT
Sbjct: 196 TASRNHT 202
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 2 TASNNH 7
TASN H
Sbjct: 229 TASNQH 234
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LTASNNHTC 9
A+N H C
Sbjct: 227 FAANNQHVC 235
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LTASNNHTC 9
A+N H C
Sbjct: 227 FAANNQHVC 235
92|SequenceR|465|456|PQKWSLTASN
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 PQKWSLT 7
PQKWS T
Sbjct: 1290 PQKWSFT 1296
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 1 PQKWSL 6
PQ+WSL
Sbjct: 399 PQQWSL 404
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 KWSLTA 8
KW LTA
Sbjct: 2315 KWDLTA 2320
>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)
Query: 1 PQKWSLTAS 9
PQ W + +S
Sbjct: 504 PQTWKIISS 512
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 4 WSLTAS 9
W++TAS
Sbjct: 521 WTITAS 526
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 KWSLTA 8
KW LTA
Sbjct: 2315 KWDLTA 2320
93|SequenceR|470|461|VTSLPPQKWS
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 5 PPQKWS 10
PPQKWS
Sbjct: 1289 PPQKWS 1294
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 VTSLPPQKWS 10
VTS+ ++WS
Sbjct: 1958 VTSMSSKQWS 1967
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 5 PPQKWS 10
PPQ+W+
Sbjct: 1138 PPQRWA 1143
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 VTSLPPQKWS 10
VTS+ ++WS
Sbjct: 1958 VTSMSSKQWS 1967
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 VTSLPPQKWS 10
VTS+ ++WS
Sbjct: 1958 VTSISSRQWS 1967
>sp|NS1_I61A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 SLPP-QKW 9
SLPP QKW
Sbjct: 213 SLPPEQKW 220
>sp|VEMP_MERS1|ENVELOPE small membrane protein|Middle East respiratory syndrome-related
Query: 4 LPPQKW 9
LPP +W
Sbjct: 76 LPPDEW 81
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 TSLPPQKW 9
+S PP +W
Sbjct: 866 SSTPPDRW 873
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VTSLPPQ 7
+ S+PPQ
Sbjct: 358 IPSIPPQ 364
>sp|VP6_ROTHL|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 VTSLPPQKWS 10
+ +LP + WS
Sbjct: 51 IGNLPTRNWS 60
>sp|VP6_ROTHS|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 VTSLPPQKWS 10
+ +LP + WS
Sbjct: 51 IGNLPTRNWS 60
>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus
Query: 5 PPQKWS 10
PP WS
Sbjct: 362 PPYHWS 367
94|SequenceR|475|466|YGDAPVTSLP
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 PVTSLP 10
PVTSLP
Sbjct: 350 PVTSLP 355
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 PVTSLP 10
PVTSLP
Sbjct: 350 PVTSLP 355
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 5 PVTSLP 10
PVTSLP
Sbjct: 350 PVTSLP 355
>sp|PG037_VACCC|INHIBITOR of Apoptosis OPG037|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YGDAPVTSL 9
+GD+P+T L
Sbjct: 267 FGDSPLTLL 275
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 DAPVTSLP 10
D PV +LP
Sbjct: 65 DTPVATLP 72
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96)
Query: 3 DAPVTSLP 10
D PV +LP
Sbjct: 65 DTPVATLP 72
>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)
Query: 1 YGDAPVTSL 9
+GD+P+T L
Sbjct: 237 FGDSPLTLL 245
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 DAPVTSLP 10
D PV +LP
Sbjct: 65 DVPVATLP 72
>sp|PG037_VAR67|INHIBITOR of Apoptosis OPG037|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 YGDAPVTSL 9
+GD+P+T L
Sbjct: 241 FGDSPLTLL 249
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 DAPVTSLP 10
D PV +LP
Sbjct: 65 DVPVATLP 72
>sp|UL92_HCMVM|UNCHARACTERIZED protein UL92|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YGDAPV 6
YG+APV
Sbjct: 191 YGNAPV 196
>sp|UL92_HCMVA|PROTEIN UL92|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YGDAPV 6
YG+APV
Sbjct: 191 YGNAPV 196
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 YGDAPVTSLP 10
Y DA V LP
Sbjct: 3431 YKDAQVVQLP 3440
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 YGDAPVTSLP 10
Y DA V LP
Sbjct: 3431 YKDAQVVQLP 3440
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 YGDAPVTSLP 10
Y DA V LP
Sbjct: 3469 YRDAQVVQLP 3478
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 YGDAPVTSLP 10
Y DA V LP
Sbjct: 3489 YRDAQVVQLP 3498
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 YGDAPVTSLP 10
Y DA V LP
Sbjct: 3519 YRDAQVVQLP 3528
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 YGDAPVTSLP 10
Y DA V LP
Sbjct: 3469 YRDAQVVQLP 3478
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 YGDAPVTSLP 10
Y DA V LP
Sbjct: 3519 YRDAQVVQLP 3528
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 YGDAPVTSLP 10
Y DA V LP
Sbjct: 3489 YRDAQVVQLP 3498
>sp|NS1_I78A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New
Query: 2 GDAPV 6
GDAPV
Sbjct: 28 GDAPV 32
>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)
Query: 5 PVTSLP 10
P+T+LP
Sbjct: 424 PITALP 429
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 YGDAPVTSLP 10
Y AP+ +LP
Sbjct: 939 YSFAPLENLP 948
>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)
Query: 3 DAPVTSLP 10
D+P+T+LP
Sbjct: 492 DSPLTALP 499
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 1 YGDAPVT 7
+GD PVT
Sbjct: 314 WGDLPVT 320
95|SequenceR|480|471|DLELIYGDAP
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 3 ELIYGDAP 10
ELI GD+P
Sbjct: 2079 ELILGDSP 2086
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 1 DLELIYGD 8
++E+IYGD
Sbjct: 733 EVEVIYGD 740
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 2 LELIYGD 8
+E+IYGD
Sbjct: 733 IEVIYGD 739
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 2 LELIYGD 8
+E+IYGD
Sbjct: 734 VEVIYGD 740
>sp|PG172_MONPV|PROTEIN OPG172|Monkeypox virus (MPXV)
Query: 1 DLELIYGD 8
D+EL YG+
Sbjct: 31 DIELCYGN 38
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 5 IYGDAP 10
+YGD P
Sbjct: 332 VYGDTP 337
>sp|PG172_VARV|PROTEIN A43|Variola virus
Query: 1 DLELIYGD 8
D+EL YG+
Sbjct: 31 DVELCYGN 38
>sp|PG172_VAR67|PROTEIN A43|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 DLELIYGD 8
D+EL YG+
Sbjct: 31 DVELCYGN 38
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 DLELIYGD 8
DLE +YG+
Sbjct: 317 DLERLYGE 324
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 DLELIYGD 8
DLE +YG+
Sbjct: 317 DLERLYGE 324
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 DLELIYGD 8
DLE +YG+
Sbjct: 317 DLERLYGE 324
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LELIYGDAP 10
L + YGD P
Sbjct: 35 LRIYYGDDP 43
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LELIYGDAP 10
L + YGD P
Sbjct: 35 LRIYYGDDP 43
>sp|GI_VZVO|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Oka vaccine)
Query: 2 LELIYGD 8
LEL+Y D
Sbjct: 72 LELLYAD 78
>sp|GI_VZVD|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LELIYGD 8
LEL+Y D
Sbjct: 72 LELLYAD 78
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 DLELIYGDAP 10
D+EL GD P
Sbjct: 555 DVELPGGDVP 564
>sp|PG172_VACCC|PROTEIN A43|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DLELIYG 7
D+EL YG
Sbjct: 32 DVELCYG 38
>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DLELIYG 7
D ELIYG
Sbjct: 257 DGELIYG 263
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 2 LELIYGD 8
L +IYGD
Sbjct: 749 LRVIYGD 755
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 2 LELIYGD 8
L +IYGD
Sbjct: 749 LRVIYGD 755
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 2 LELIYGD 8
L +IYGD
Sbjct: 749 LRVIYGD 755
>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DLELIYG 7
D ELIYG
Sbjct: 257 DGELIYG 263
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 DLELIYG 7
D ELIYG
Sbjct: 257 DGELIYG 263
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 1 DLELIYGDAP 10
DL+ Y D P
Sbjct: 389 DLKQYYSDEP 398
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 DLELIYGD 8
++++IYGD
Sbjct: 844 EVKVIYGD 851
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 1 DLELIYGD 8
++++IYGD
Sbjct: 844 EVKVIYGD 851
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 1 DLELIYGDAP 10
DL+ Y D P
Sbjct: 389 DLKQYYSDEP 398
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 DLELIY 6
D+EL+Y
Sbjct: 822 DIELVY 827
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 4 LIYGDAP 10
L+Y +AP
Sbjct: 614 LVYAEAP 620
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 DLELIYGD 8
+ +IYGD
Sbjct: 884 SMRIIYGD 891
96|SequenceR|485|476|GGNGDDLELI
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 3 NGDDLELI 10
NG DLEL+
Sbjct: 1586 NGGDLELV 1593
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 3 NGDDLELI 10
NG DLEL+
Sbjct: 1586 NGGDLELV 1593
>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus
Query: 2 GNGDDLE 8
GNG DLE
Sbjct: 600 GNGADLE 606
>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 2 GNGDDLE 8
GNG DLE
Sbjct: 600 GNGADLE 606
>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GNGDDLE 8
GNG DLE
Sbjct: 600 GNGADLE 606
>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 2 GNGDDLE 8
GNG DLE
Sbjct: 600 GNGADLE 606
>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)
Query: 2 GNGDDLE 8
GNG DLE
Sbjct: 601 GNGADLE 607
>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 2 GNGDDLE 8
GNG DLE
Sbjct: 600 GNGADLE 606
>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 2 GNGDDLE 8
GNG DLE
Sbjct: 600 GNGADLE 606
>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a
Query: 1 GGNGDDLELI 10
GGNGD +
Sbjct: 348 GGNGDKTAFV 357
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 1 GGNGDDL 7
GNGD+L
Sbjct: 274 AGNGDNL 280
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 1 GGNGDD 6
GG+GDD
Sbjct: 392 GGSGDD 397
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 4 GDDLELI 10
G DLELI
Sbjct: 32 GTDLELI 38
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 4 GDDLELI 10
G DLELI
Sbjct: 32 GTDLELI 38
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 GGNGDD 6
GGNG D
Sbjct: 741 GGNGGD 746
>sp|VL2_HPV40|MINOR capsid protein L2|Human papillomavirus 40
Query: 2 GNGDDLEL 9
G DD+EL
Sbjct: 330 GAADDIEL 337
>sp|REV_HV2KR|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 GGNGDD 6
GGNG D
Sbjct: 143 GGNGTD 148
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 3 NGDDLELI 10
NG DLE++
Sbjct: 1590 NGIDLEIL 1597
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 NGDDLEL 9
NG DLE+
Sbjct: 350 NGGDLEV 356
97|SequenceR|490|481|VERFQGGNGD
>sp|REV_HV2KR|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 VERFQGGNG 9
VER GGNG
Sbjct: 138 VERLVGGNG 146
>sp|VL2_HPV26|MINOR capsid protein L2|Human papillomavirus type 26
Query: 1 VERFQGGNG 9
+ F GGNG
Sbjct: 120 IPTFSGGNG 128
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 4 FQGGNGD 10
F GG+GD
Sbjct: 476 FTGGHGD 482
>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a
Query: 4 FQGGNGD 10
+ GGNGD
Sbjct: 346 WAGGNGD 352
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 FQGGNGD 10
F GG+GD
Sbjct: 476 FTGGHGD 482
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 5 QGGNGD 10
QGGN D
Sbjct: 1599 QGGNAD 1604
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 5 QGGNGD 10
QGGN D
Sbjct: 1596 QGGNAD 1601
>sp|PG144_VARV|VIRION membrane protein OPG144 precursor|Variola virus
Query: 2 ERFQGGNGD 10
+ ++GGNG+
Sbjct: 105 QMYRGGNGN 113
>sp|PG144_VAR67|VIRION membrane protein OPG144 precursor|Variola virus (isolate
Query: 2 ERFQGGNGD 10
+ ++GGNG+
Sbjct: 105 QMYRGGNGN 113
>sp|PG144_VACCC|VIRION membrane protein OPG144 precursor|Vaccinia virus (strain
Query: 2 ERFQGGNGD 10
+ ++GGNG+
Sbjct: 105 QMYRGGNGN 113
>sp|PG144_MONPV|VIRION membrane protein OPG144 precursor|Monkeypox virus (MPXV)
Query: 2 ERFQGGNGD 10
+ ++GGNG+
Sbjct: 106 QMYRGGNGN 114
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VERFQGGN 8
V+RF GN
Sbjct: 658 VKRFNSGN 665
>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate
Query: 2 ERFQGGNG 9
E F+ GNG
Sbjct: 18 EEFKKGNG 25
>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain
Query: 2 ERFQGGNG 9
E F+ GNG
Sbjct: 18 EEFKKGNG 25
>sp|REP_HCYV5|REPLICATION-ASSOCIATED protein|Human associated cyclovirus 1 (isolate
Query: 1 VERFQGGNG 9
V+ Q GNG
Sbjct: 114 VDTIQAGNG 122
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 ERFQGGNG 9
E QGG+G
Sbjct: 483 ETIQGGDG 490
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 5 QGGNGD 10
+GG+GD
Sbjct: 144 EGGSGD 149
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 5 QGGNGD 10
+GG+GD
Sbjct: 142 EGGSGD 147
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 5 QGGNGD 10
+GG+GD
Sbjct: 144 EGGSGD 149
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 5 QGGNGD 10
+GG+GD
Sbjct: 143 EGGSGD 148
98|SequenceR|495|486|EKGVYVERFQ
>sp|UL60_HCMVA|UNCHARACTERIZED protein UL60|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 KGVYVERF 9
+ V+VERF
Sbjct: 123 QSVFVERF 130
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 EKGVYVERFQ 10
E G Y +R+Q
Sbjct: 943 ESGYYPKRYQ 952
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 KGVYVERFQ 10
KGVY R++
Sbjct: 920 KGVYAVRYK 928
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 KGVYVERFQ 10
KGVY R++
Sbjct: 922 KGVYAVRYK 930
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 KGVYVERFQ 10
KGVY R++
Sbjct: 922 KGVYAVRYK 930
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 KGVYVERFQ 10
KGVY R++
Sbjct: 920 KGVYAVRYK 928
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 KGVYVERFQ 10
KGVY R++
Sbjct: 920 KGVYAVRYK 928
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 KGVYVERFQ 10
KGVY R++
Sbjct: 920 KGVYAVRYK 928
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 KGVYVERFQ 10
KGVY R++
Sbjct: 922 KGVYAVRYK 930
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 3 GVYVER 8
G+YVER
Sbjct: 141 GLYVER 146
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 KGVYVERF 9
KG+ +E+F
Sbjct: 1164 KGIIIEKF 1171
99|SequenceR|500|491|VTCMTEKGVY
>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)
Query: 1 VTCMTEKG 8
+ CMTE+G
Sbjct: 180 IACMTEQG 187
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 1 VTCMTEKG 8
+ CM EKG
Sbjct: 297 IECMGEKG 304
>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18
Query: 1 VTCMTEKGVY 10
TC++ +G+Y
Sbjct: 154 ATCVSHRGLY 163
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 5 TEKGVY 10
T+KGVY
Sbjct: 774 TQKGVY 779
>sp|M1_I68A0|MATRIX protein 1|Influenza A virus (strain A/Aichi/2/1968
Query: 1 VTCMTEKGV 9
+TC +E+G+
Sbjct: 66 LTCPSERGL 74
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 1 VTCMTEKGV 9
V +TEKG+
Sbjct: 34 VDTLTEKGI 42
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 1 VTCMTEKGV 9
V +TEKG+
Sbjct: 34 VDTLTEKGI 42
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 1 VTCMTEKGV 9
V +TEKG+
Sbjct: 34 VDTLTEKGI 42
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 1 VTCMTEKGV 9
V +TEKG+
Sbjct: 34 VDTLTEKGI 42
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 1 VTCMTEKGV 9
V +TEKG+
Sbjct: 34 VDTLTEKGI 42
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 1 VTCMTEKGV 9
V +TEKG+
Sbjct: 34 VDTLTEKGI 42
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 1 VTCMTEKGV 9
V +TEKG+
Sbjct: 34 VDTLTEKGI 42
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 1 VTCMTEKGV 9
V +TEKG+
Sbjct: 34 VDTLTEKGI 42
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 1 VTCMTEKGV 9
V +TEKG+
Sbjct: 34 VDTLTEKGI 42
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 1 VTCMTEKGV 9
V +TEKG+
Sbjct: 34 VDTLTEKGI 42
>sp|M1_I61A1|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 VTCMTEKGV 9
+TC +E+G+
Sbjct: 66 LTCPSERGL 74
>sp|M1_I54A1|MATRIX protein 1|Influenza A virus (strain A/Swine/May/1954
Query: 1 VTCMTEKGV 9
+TC +E+G+
Sbjct: 66 LTCPSERGL 74
>sp|E1B55_ADE12|E1B 55 kDa protein|Human adenovirus A serotype 12
Query: 2 TCMTEKGVY 10
TC+ GVY
Sbjct: 240 TCLVLHGVY 248
>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988
Query: 2 TCMTEKG 8
TC T KG
Sbjct: 295 TCQTPKG 301
>sp|NS1_HRSV|NON-STRUCTURAL protein 1|Human respiratory syncytial virus
Query: 1 VTCMTEKGVY 10
+TC T+K ++
Sbjct: 27 ITCYTDKLIH 36
>sp|NS1_HRSVA|NON-STRUCTURAL protein 1|Human respiratory syncytial virus A
Query: 1 VTCMTEKGVY 10
+TC T+K ++
Sbjct: 27 ITCYTDKLIH 36
>sp|NS1_HRSS2|NON-STRUCTURAL protein 1|Human respiratory syncytial virus A
Query: 1 VTCMTEKGVY 10
+TC T+K ++
Sbjct: 27 ITCYTDKLIH 36
>sp|TAT_HV1YB|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 3 CMTEKGV 9
C T+KG+
Sbjct: 37 CFTKKGL 43
>sp|TAT_HV1Y2|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 3 CMTEKGV 9
C T+KG+
Sbjct: 37 CFTKKGL 43
100|SequenceR|505|496|FHLGDVTCMT
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 FHLGDVTC 8
+ +GDV C
Sbjct: 1910 YRMGDVVC 1917
>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka
Query: 3 LGDVTCMT 10
D+TC+T
Sbjct: 358 FSDITCIT 365
>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)
Query: 3 LGDVTCMT 10
D+TC+T
Sbjct: 358 FSDITCIT 365
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 FHLGDVTCMT 10
FH DVTC T
Sbjct: 137 FH-NDVTCNT 145
>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)
Query: 3 LGDVTCMT 10
+GD++C T
Sbjct: 1 MGDLSCWT 8
>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 LGDVTCMT 10
+GD++C T
Sbjct: 1 MGDLSCWT 8
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 HLGDVT 7
H+GD+T
Sbjct: 391 HVGDIT 396
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 GDVTCM 9
GD+TC+
Sbjct: 1270 GDITCV 1275
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 GDVTCM 9
GD+TC+
Sbjct: 1270 GDITCV 1275
>sp|PG187_VAR67|B1 kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 HLGDVTC 8
H+G +TC
Sbjct: 77 HVGVITC 83
>sp|PG187_VACCC|B1 kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 HLGDVTC 8
H+G +TC
Sbjct: 77 HVGLITC 83
>sp|PG187_VACCA|B1 kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 HLGDVTC 8
H+G +TC
Sbjct: 77 HVGLITC 83
>sp|PG187_MONPV|B1 kinase|Monkeypox virus (MPXV)
Query: 2 HLGDVTC 8
H+G +TC
Sbjct: 77 HVGLITC 83
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 5 DVTCMT 10
DVTC T
Sbjct: 139 DVTCRT 144
>sp|US30_HCMVM|UNCHARACTERIZED protein US30|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FHLGDVTCMT 10
FHL + C T
Sbjct: 123 FHLSGLGCPT 132
>sp|US30_HCMVA|UNCHARACTERIZED protein HHRF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FHLGDVTCMT 10
FHL + C T
Sbjct: 123 FHLSGLGCPT 132
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 FHLGDVT 7
F+LGD++
Sbjct: 1268 FYLGDIS 1274
>sp|RP18_MONPV|DNA-DIRECTED RNA polymerase 18 kDa|Monkeypox virus (MPXV)
Query: 1 FHLGDV 6
+H+GD+
Sbjct: 79 YHVGDI 84
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 FHLGDVT 7
F+LGD++
Sbjct: 1268 FYLGDIS 1274
>sp|RP18_VACCA|DNA-DIRECTED RNA polymerase 18 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 FHLGDV 6
+H+GD+
Sbjct: 79 YHVGDI 84
101|SequenceR|510|501|NYTSNFHLGD
>sp|NCAP_SEOUS|NUCLEOPROTEIN virus (strain SR-11) (Sapporo
Query: 5 NFHLGD 10
NFHLGD
Sbjct: 395 NFHLGD 400
>sp|NCAP_HANTV|NUCLEOPROTEIN virus (strain 76-118) (Korean
Query: 5 NFHLGD 10
NFHLGD
Sbjct: 395 NFHLGD 400
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 NYTSNFHL 8
+YT NFH
Sbjct: 1390 DYTKNFHF 1397
>sp|PG193_MONPV|SOLUBLE interferon gamma receptor OPG193|Monkeypox virus (MPXV)
Query: 2 YTSNFHLGD 10
YT+NF GD
Sbjct: 147 YTANFTFGD 155
>sp|PG193_VACCC|SOLUBLE interferon gamma receptor OPG193|Vaccinia virus (strain Copenhagen)
Query: 2 YTSNFHLGD 10
YT+NF GD
Sbjct: 147 YTANFTFGD 155
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 4 SNFHLGD 10
++FHLGD
Sbjct: 394 NHFHLGD 400
>sp|NCAP_SINV|NUCLEOPROTEIN Nombre orthohantavirus (SNV) (Sin
Query: 4 SNFHLGD 10
++FHLGD
Sbjct: 393 NHFHLGD 399
>sp|NCAP_BCCV|NUCLEOPROTEIN Creek Canal orthohantavirus (BCCV)
Query: 4 SNFHLGD 10
++FHLGD
Sbjct: 393 NHFHLGD 399
>sp|NCAP_ANDV|NUCLEOPROTEIN orthohantavirus (ANDV) (Andes virus)
Query: 4 SNFHLGD 10
++FHLGD
Sbjct: 393 NHFHLGD 399
>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)
Query: 5 NFHLGD 10
+FHLGD
Sbjct: 395 SFHLGD 400
>sp|NCAP_PUUMU|NUCLEOPROTEIN virus (strain Udmurtia/894CG/91)
Query: 5 NFHLGD 10
+FHLGD
Sbjct: 399 HFHLGD 404
>sp|NCAP_PUUMS|NUCLEOPROTEIN virus (strain Sotkamo/V-2969/81)
Query: 5 NFHLGD 10
+FHLGD
Sbjct: 399 HFHLGD 404
>sp|NCAP_PUUMP|NUCLEOPROTEIN virus (strain P360)
Query: 5 NFHLGD 10
+FHLGD
Sbjct: 399 HFHLGD 404
>sp|NCAP_PUUMK|NUCLEOPROTEIN virus (strain K27)
Query: 5 NFHLGD 10
+FHLGD
Sbjct: 399 HFHLGD 404
>sp|NCAP_PUUMG|NUCLEOPROTEIN virus (strain Bank vole/Russia/CG1820/1984)
Query: 5 NFHLGD 10
+FHLGD
Sbjct: 399 HFHLGD 404
>sp|NCAP_PUUME|NUCLEOPROTEIN virus (strain Evo/12CG/93)
Query: 5 NFHLGD 10
+FHLGD
Sbjct: 399 HFHLGD 404
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 TSNFH 7
TSNFH
Sbjct: 1544 TSNFH 1548
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 1 NYTSNFHL 8
NY SNF L
Sbjct: 463 NYKSNFWL 470
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 YTSNFHLGD 10
+TS FH G+
Sbjct: 675 FTSVFHCGE 683
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 4 SNFHLGD 10
S+FH GD
Sbjct: 2177 SHFHPGD 2183
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 2 YTSNFHLGD 10
YT N LGD
Sbjct: 181 YTHNVMLGD 189
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 NYTSNFHLG 9
N NF+LG
Sbjct: 1124 NLPQNFYLG 1132
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 NYTSNFHLG 9
N NF+LG
Sbjct: 1124 NLPQNFYLG 1132
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 2 YTSNFHLGD 10
YT N LGD
Sbjct: 181 YTHNVILGD 189
102|SequenceR|515|506|AKVRANYTSN
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 AKVRANYTSN 10
A V+A+YTSN
Sbjct: 1471 AVVQADYTSN 1480
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 AKVRANYTSN 10
A V+A+YTSN
Sbjct: 1471 AVVQADYTSN 1480
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 AKVRANYTSN 10
A V+A+YTSN
Sbjct: 1471 AVVQADYTSN 1480
>sp|KRB2_MONPV|PSEUDOKINASE OPG198|Monkeypox virus (MPXV)
Query: 2 KVRANYTSN 10
KVR N+TS+
Sbjct: 30 KVRKNFTSS 38
>sp|KRB2_VACCC|PSEUDOKINASE OPG198|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 KVRANYTSN 10
KVR N+TS+
Sbjct: 30 KVRKNFTSS 38
>sp|KRB2_VACCA|PSEUDOKINASE OPG198|Vaccinia virus (strain Ankara) (VACV)
Query: 2 KVRANYTSN 10
KVR N+TS+
Sbjct: 30 KVRKNFTSS 38
>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus
Query: 5 ANYTSN 10
ANYTSN
Sbjct: 119 ANYTSN 124
>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate
Query: 5 ANYTSN 10
ANYTSN
Sbjct: 119 ANYTSN 124
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 2 KVRANYTSN 10
+V A YTSN
Sbjct: 389 QVTATYTSN 397
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 5 ANYTSN 10
ANY+SN
Sbjct: 707 ANYSSN 712
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 5 ANYTSN 10
ANYT N
Sbjct: 203 ANYTEN 208
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 5 ANYTSN 10
ANYT N
Sbjct: 203 ANYTEN 208
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 KVRANYTSN 10
++ NYTSN
Sbjct: 387 EMHTNYTSN 395
103|SequenceR|520|511|GTKNFAKVRA
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 2 TKNFAKV 8
TK+FAKV
Sbjct: 232 TKDFAKV 238
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 3 KNFAKV 8
KNFAK+
Sbjct: 826 KNFAKI 831
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 3 KNFAKVRA 10
KNF K+R
Sbjct: 2463 KNFKKLRG 2470
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 3 KNFAKVRA 10
KNF K+R
Sbjct: 1132 KNFKKLRG 1139
>sp|CEP2_HHV11|CYTOPLASMIC envelopment protein 2|Human herpesvirus 1 (strain 17)
Query: 2 TKNFAKVRA 10
T FA++RA
Sbjct: 143 TLTFARIRA 151
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 2 TKNFAK 7
TKNFA+
Sbjct: 648 TKNFAE 653
104|SequenceR|525|516|SYPSVGTKNF
>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus
Query: 2 YPSVGTKN 9
YPS GT+N
Sbjct: 412 YPSAGTEN 419
>sp|VU3_HHV7J|PROTEIN U3|Human herpesvirus 7 (strain JI)
Query: 1 SYPSVGTKNF 10
++P VGT+ F
Sbjct: 373 AFPDVGTQIF 382
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 4 SVGTKNF 10
SVGTK+F
Sbjct: 498 SVGTKHF 504
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 SYPSVG 6
SYPSVG
Sbjct: 318 SYPSVG 323
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SYPSVGTK 8
S+P+VG+K
Sbjct: 620 SHPTVGSK 627
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SYPSVGTK 8
S+P+VG+K
Sbjct: 620 SHPTVGSK 627
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SYPSVGTK 8
S+P+VG+K
Sbjct: 620 SHPTVGSK 627
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 YPSVGTKNF 10
YP + T+N
Sbjct: 882 YPGIKTRNL 890
>sp|US14_HCMVA|UNCHARACTERIZED protein HVLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 YPSVGTK 8
YPS+G K
Sbjct: 90 YPSLGYK 96
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 2 YPSVGT 7
YPSVG+
Sbjct: 321 YPSVGS 326
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 4 SVGTKNF 10
+VGTK F
Sbjct: 495 TVGTKTF 501
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 4 SVGTKNF 10
+VGTK F
Sbjct: 495 TVGTKTF 501
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 PSVGTK 8
P VGTK
Sbjct: 2880 PQVGTK 2885
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 PSVGTK 8
P VGTK
Sbjct: 2880 PQVGTK 2885
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 YPSVGT 7
+PS+GT
Sbjct: 1703 WPSIGT 1708
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 YPSVGT 7
+PS+GT
Sbjct: 1703 WPSIGT 1708
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 YPSVG 6
YPSVG
Sbjct: 319 YPSVG 323
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 YPSVG 6
YPSVG
Sbjct: 319 YPSVG 323
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 4 SVGTKNF 10
++GTK+F
Sbjct: 497 TIGTKHF 503
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 YPSVG 6
YPSVG
Sbjct: 319 YPSVG 323
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 YPSVG 6
YPSVG
Sbjct: 319 YPSVG 323
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 YPSVG 6
YPSVG
Sbjct: 319 YPSVG 323
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 YPSVG 6
YPSVG
Sbjct: 319 YPSVG 323
105|SequenceR|530|521|LVLTKSYPSV
>sp|UNG_EBVB9|URACIL-DNA glycosylase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LVLTKSYPS 9
LVLT +PS
Sbjct: 207 LVLTSQHPS 215
>sp|UNG_HHV8P|URACIL-DNA glycosylase|Human herpesvirus 8 type P
Query: 1 LVLTKSYPS 9
LVLT +PS
Sbjct: 204 LVLTAQHPS 212
>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LVLTKSYPS 9
LVLT ++PS
Sbjct: 264 LVLTHAHPS 272
>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LVLTKSYPS 9
LVLT ++PS
Sbjct: 264 LVLTHAHPS 272
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 LVLTKSYPSV 10
LVL +++P+V
Sbjct: 1993 LVLQENFPTV 2002
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 LVLTKSYPSV 10
LVL +++P+V
Sbjct: 2013 LVLQENFPTV 2022
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 VLTKSYPS 9
+L KS+PS
Sbjct: 1662 LLIKSFPS 1669
106|SequenceR|535|526|VESTQLVLTK
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 ESTQLVLT 9
EST+LVLT
Sbjct: 176 ESTELVLT 183
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 ESTQLVLT 9
EST+LVLT
Sbjct: 245 ESTELVLT 252
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 2 ESTQLVLT 9
E T+LVLT
Sbjct: 245 ERTELVLT 252
107|SequenceR|540|531|FAFWAVESTQ
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 FAFWAVESTQ 10
FA+W + + Q
Sbjct: 657 FAYWVINTRQ 666
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 FAFWAVEST 9
FAFW V T
Sbjct: 7070 FAFWTVFCT 7078
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 FAFWAVEST 9
FAFW V T
Sbjct: 7020 FAFWTVFCT 7028
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 FAFWAVEST 9
FAFW V T
Sbjct: 7040 FAFWTVFCT 7048
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 FAFWAVEST 9
FAFW V T
Sbjct: 6983 FAFWTVFCT 6991
>sp|FUS_MUMPS|FUSION glycoprotein F0|Mumps virus (strain SBL) (MuV)
Query: 1 FAFWAVESTQ 10
F FWA +T+
Sbjct: 504 FCFWAYIATK 513
>sp|FUS_MUMP1|FUSION glycoprotein F0|Mumps virus (strain SBL-1) (MuV)
Query: 1 FAFWAVESTQ 10
F FWA +T+
Sbjct: 504 FCFWAYIATK 513
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 FAFWA 5
F+FWA
Sbjct: 616 FSFWA 620
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 FAFWA 5
F+FWA
Sbjct: 617 FSFWA 621
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 FAFWAVEST 9
FAFW + T
Sbjct: 6615 FAFWTLFCT 6623
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 1 FAFWAVEST 9
FA W +E+T
Sbjct: 620 FAPWDLEAT 628
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 1 FAFWAVEST 9
FA W +E+T
Sbjct: 620 FAPWDLEAT 628
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 1 FAFWAVEST 9
FA W +E+T
Sbjct: 620 FAPWDLEAT 628
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 1 FAFWAVEST 9
FA W +E+T
Sbjct: 620 FAPWDLEAT 628
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 1 FAFWAVEST 9
FA W +E+T
Sbjct: 620 FAPWDLEAT 628
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 FAFWAVEST 9
FA W +E+T
Sbjct: 620 FAPWDLEAT 628
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 1 FAFWAVEST 9
FA W +E+T
Sbjct: 620 FAPWDLEAT 628
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 1 FAFWAVEST 9
FA W +E+T
Sbjct: 620 FAPWDLEAT 628
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 1 FAFWAVEST 9
FA W +E+T
Sbjct: 620 FAPWDLEAT 628
108|SequenceR|545|536|ASGPDFAFWA
>sp|VP1_POVWU|MAJOR capsid protein VP1|WU polyomavirus (WUPyV)
Query: 2 SGPDFAFWA 10
+GP FWA
Sbjct: 146 AGPQLYFWA 154
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 4 PDFAFW 9
PDFAF+
Sbjct: 694 PDFAFY 699
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 PDFAFW 9
PDFAF+
Sbjct: 694 PDFAFY 699
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 PDFAFW 9
PDFAF+
Sbjct: 694 PDFAFY 699
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 4 PDFAFW 9
PDFAF+
Sbjct: 694 PDFAFY 699
>sp|YVIA_VACCC|UNCHARACTERIZED 9.3 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 DFAFW 9
DF+FW
Sbjct: 6 DFSFW 10
>sp|DR7_HHV6U|TRANSACTIVATOR protein DR7|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SGPDFAFW 9
+GP AFW
Sbjct: 287 AGPLLAFW 294
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 5 DFAFW 9
DFA+W
Sbjct: 1169 DFAYW 1173
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 5 DFAFW 9
DFA+W
Sbjct: 1219 DFAYW 1223
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 5 DFAFW 9
DFA+W
Sbjct: 1189 DFAYW 1193
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 5 DFAFW 9
DFA+W
Sbjct: 1132 DFAYW 1136
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 GPDFAFW 9
GPD+A++
Sbjct: 6582 GPDYAYF 6588
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 5 DFAFW 9
DFA+W
Sbjct: 1132 DFAYW 1136
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 5 DFAFW 9
DFA+W
Sbjct: 1169 DFAYW 1173
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 5 DFAFW 9
DFA+W
Sbjct: 1189 DFAYW 1193
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 5 DFAFW 9
DFA+W
Sbjct: 1219 DFAYW 1223
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 3 GPDFAFWA 10
GPD A WA
Sbjct: 974 GPDTAAWA 981
>sp|DR6_HHV6U|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SGPDFAFW 9
+GP AFW
Sbjct: 319 AGPLLAFW 326
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 GPDFAFW 9
G +FA+W
Sbjct: 654 GDNFAYW 660
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 SGPDFAF 8
+GPDF+
Sbjct: 1221 TGPDFSL 1227
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 ASGPDF 6
A GPDF
Sbjct: 1415 AVGPDF 1420
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 ASGPDF 6
A GPDF
Sbjct: 1415 AVGPDF 1420
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 DFAFWA 10
DF +W+
Sbjct: 296 DFTYWS 301
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 DFAFWA 10
DF +W+
Sbjct: 296 DFTYWS 301
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 ASGPDFAFWA 10
AS P A WA
Sbjct: 370 ASNPHLADWA 379
>sp|NCAP_CHAV|NUCLEOPROTEIN virus (strain I653514) (CHPV)
Query: 4 PDFAFWA 10
P F FW
Sbjct: 296 PSFHFWG 302
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 ASGPDFAFWA 10
AS P A WA
Sbjct: 370 ASNPHLADWA 379
>sp|DR6_HHV6Z|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6B (strain Z29)
Query: 2 SGPDFAFW 9
+GP +FW
Sbjct: 322 AGPLLSFW 329
109|SequenceR|550|541|IIDSHASGPD
>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)
Query: 2 IDSHASG 8
+D+HASG
Sbjct: 13 LDTHASG 19
>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)
Query: 2 IDSHASG 8
+D+HASG
Sbjct: 13 LDTHASG 19
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 IIDSHAS 7
IIDSH +
Sbjct: 1044 IIDSHTT 1050
>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12
Query: 1 IIDSHASGP 9
++DS AS P
Sbjct: 447 LLDSRASSP 455
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 IDSHASGP 9
+DS +SGP
Sbjct: 1737 MDSWSSGP 1744
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 3 DSHASGP 9
D H SGP
Sbjct: 357 DVHYSGP 363
>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 IDSHASGP 9
+DSH S P
Sbjct: 507 LDSHISFP 514
>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 IIDSHASGP 9
++ SH+S P
Sbjct: 324 VVVSHSSNP 332
>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 IIDSHASGP 9
++ SH+S P
Sbjct: 324 VVVSHSSNP 332
110|SequenceR|555|546|NDNSLIIDSH
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 DNSLIIDSH 10
DN ++DSH
Sbjct: 1009 DNDGVLDSH 1017
>sp|FUS_MUMPK|FUSION glycoprotein F0|Mumps virus (strain Kilham) (MuV)
Query: 1 NDNSLIIDSH 10
N+L+ID H
Sbjct: 281 QSNALVIDFH 290
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 NSLIID 8
NSL+ID
Sbjct: 283 NSLVID 288
>sp|E1A_ADE40|EARLY E1A protein|Human adenovirus F serotype 40
Query: 1 NDNSLIID 8
N+N L++D
Sbjct: 129 NENELVLD 136
>sp|PG142_VACCC|CORE protein OPG142|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NDNSLIIDS 9
+DNSLII S
Sbjct: 4 DDNSLIIYS 12
>sp|PG142_VACCA|CORE protein OPG142|Vaccinia virus (strain Ankara) (VACV)
Query: 1 NDNSLIIDS 9
+DNSLII S
Sbjct: 4 DDNSLIIYS 12
>sp|PG142_MONPV|CORE protein OPG142|Monkeypox virus (MPXV)
Query: 1 NDNSLIIDS 9
+DNSLII S
Sbjct: 4 DDNSLIIYS 12
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 NDNSLIIDS 9
DN LI DS
Sbjct: 1373 RDNELIYDS 1381
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 NDNSLIIDS 9
DN LI DS
Sbjct: 1373 RDNELIYDS 1381
111|SequenceR|560|551|CTVTLNDNSL
>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CTVTLNDNS 9
CT T N N+
Sbjct: 91 CTFTFNSNN 99
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CTVTLNDNS 9
CT T N N+
Sbjct: 581 CTFTFNSNN 589
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CTVTLNDNS 9
CT T N N+
Sbjct: 587 CTFTFNSNN 595
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CTVTLNDNS 9
CT T N N+
Sbjct: 587 CTFTFNSNN 595
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CTVTLNDNSL 10
C + L+DNS+
Sbjct: 197 CDLRLHDNSI 206
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CTVTLNDNSL 10
C + L+DNS+
Sbjct: 197 CDLRLHDNSI 206
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CTVTLNDNS 9
CT T N N+
Sbjct: 588 CTFTFNSNN 596
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CTVTLNDNS 9
CT T N N+
Sbjct: 587 CTFTFNSNN 595
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CTVTLNDNS 9
CT T N N+
Sbjct: 587 CTFTFNSNN 595
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CTVTLNDNS 9
CT T N N+
Sbjct: 587 CTFTFNSNN 595
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CTVTLNDNS 9
CT T N N+
Sbjct: 587 CTFTFNSNN 595
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CTVTLNDNS 9
CT T N N+
Sbjct: 587 CTFTFNSNN 595
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CTVTLNDNS 9
CT T N N+
Sbjct: 587 CTFTFNSNN 595
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CTVTLNDNS 9
CT T N N+
Sbjct: 566 CTFTFNSNN 574
>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)
Query: 3 VTLNDNS 9
VTLN NS
Sbjct: 305 VTLNSNS 311
>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)
Query: 3 VTLNDNS 9
VTLN NS
Sbjct: 305 VTLNSNS 311
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 1 CTVTLNDNS 9
CT T+N S
Sbjct: 128 CTYTINTGS 136
>sp|PAP1_YMTV5|POLY(A) polymerase catalytic subunit|Yaba monkey tumor virus (strain
Query: 1 CTVTLNDNSL 10
C V L++NSL
Sbjct: 348 CFVYLDENSL 357
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 1 CTVTLND 7
C V LND
Sbjct: 693 CEVLLND 699
>sp|PAP1_YLDV|POLY(A) polymerase catalytic subunit|Yaba-like disease virus (YLDV)
Query: 1 CTVTLNDNSL 10
C V L++NSL
Sbjct: 348 CFVYLDENSL 357
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 1 CTVTLN 6
C +TLN
Sbjct: 378 CVITLN 383
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 1 CTVTLN 6
C +TLN
Sbjct: 378 CVITLN 383
>sp|AN_HHV7J|ALKALINE nuclease|Human herpesvirus 7 (strain JI)
Query: 3 VTLNDNSL 10
++ NDN+L
Sbjct: 210 ISFNDNNL 217
112|SequenceR|565|556|DDYSSCTVTL
>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)
Query: 2 DYSSCTVTL 10
D+ SCT+TL
Sbjct: 408 DWKSCTLTL 416
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 3 YSSCTVTL 10
YS CT TL
Sbjct: 759 YSGCTYTL 766
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 DDYSSCTVTL 10
+D+S+C V L
Sbjct: 282 NDFSNCMVAL 291
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 DDYSSCTV 8
DDY+ C V
Sbjct: 2517 DDYAKCIV 2524
>sp|UL33_HCMVA|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain AD169)
Query: 3 YSSCTV 8
YSSCTV
Sbjct: 112 YSSCTV 117
>sp|UL33_HCMVM|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain Merlin)
Query: 3 YSSCTV 8
YSSCTV
Sbjct: 113 YSSCTV 118
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 DDYSSCTV 8
DDY+ C +
Sbjct: 2605 DDYAKCII 2612
>sp|VE2_HPV5B|REGULATORY protein E2|Human papillomavirus type 5b
Query: 3 YSSCT 7
YSSCT
Sbjct: 338 YSSCT 342
>sp|VME1_CVHOC|MEMBRANE protein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 DDYSSCTVTL 10
+DY + TVT+
Sbjct: 140 EDYHTLTVTI 149
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 2 DYSSCTVTL 10
DY SCT L
Sbjct: 892 DYKSCTKGL 900
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 DYSSCTVTL 10
DY + T+TL
Sbjct: 895 DYGTITLTL 903
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 DYSSCTVTL 10
DY + T+TL
Sbjct: 895 DYGTITLTL 903
113|SequenceR|570|561|GLVVRDDYSS
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 LVVRDDYS 9
L VR+DYS
Sbjct: 963 LKVREDYS 970
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 LVVRDDYS 9
L VR+DYS
Sbjct: 963 LKVREDYS 970
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 LVVRDDYS 9
L VR+DYS
Sbjct: 959 LKVREDYS 966
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 3 VVRDDY 8
V+RDDY
Sbjct: 878 VLRDDY 883
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GLVVRDDYSS 10
G+V+R+D S
Sbjct: 262 GIVIRNDSHS 271
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 VVRDDY 8
V+RDDY
Sbjct: 1201 VLRDDY 1206
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 3 VVRDDYS 9
VVRD+Y+
Sbjct: 380 VVRDEYA 386
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 VVRDDYS 9
VVRD+Y+
Sbjct: 380 VVRDEYA 386
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 LVVRDDY 8
+VVR DY
Sbjct: 1067 IVVRSDY 1073
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 VVRDDYSS 10
+++DD+SS
Sbjct: 1182 LIKDDHSS 1189
>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)
Query: 2 LVVRDDYSS 10
++ R+DYS+
Sbjct: 305 IIERNDYST 313
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LVVRDDYSS 10
++ R+DYS+
Sbjct: 589 IIERNDYST 597
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 GLVVRDD 7
GL++ DD
Sbjct: 759 GLIINDD 765
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 GLVVRDD 7
GL++ DD
Sbjct: 759 GLIINDD 765
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 LVVRDDY 8
+V+R DY
Sbjct: 1067 IVIRSDY 1073
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 LVVRDDY 8
+V+R DY
Sbjct: 1067 IVIRSDY 1073
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 LVVRDDY 8
+V+R DY
Sbjct: 1067 IVIRSDY 1073
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 LVVRDDY 8
+V+R DY
Sbjct: 1067 IVIRSDY 1073
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 1 GLVVRDDYS 9
G+VV DY+
Sbjct: 305 GVVVTPDYA 313
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 GLVVRDD 7
GL+V DD
Sbjct: 759 GLLVNDD 765
114|SequenceR|575|566|SFGTKGLVVR
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 SFGTKGL 7
SFG KG+
Sbjct: 516 SFGKKGV 522
>sp|UL38_HHV6H|APOPTOSIS inhibitor U19|Human herpesvirus 6B (HHV-6 variant
Query: 1 SFGTKG 6
SFG KG
Sbjct: 203 SFGAKG 208
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GTKGLV 8
GT+GLV
Sbjct: 761 GTRGLV 766
115|SequenceR|580|571|YHIGKSFGTK
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 1 YHIGKSF 7
YH+GK+F
Sbjct: 142 YHLGKNF 148
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 YHIGKSF 7
YH+GK+F
Sbjct: 142 YHLGKNF 148
>sp|VU3_HHV6Z|PROTEIN U3|Human herpesvirus 6B (strain Z29)
Query: 2 HIGKSFGTK 10
HIG+SF +
Sbjct: 226 HIGRSFALR 234
>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 HIGKSFGTK 10
HIG+SF +
Sbjct: 213 HIGRSFALR 221
>sp|GM_HCMVA|ENVELOPE glycoprotein M|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YHIGKSFG 8
YH+G FG
Sbjct: 269 YHLGAFFG 276
>sp|GM_HCMVM|ENVELOPE glycoprotein M|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YHIGKSFG 8
YH+G FG
Sbjct: 269 YHLGAFFG 276
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 IGKSFGT 9
IGK+F T
Sbjct: 696 IGKAFST 702
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 HIGKSFG 8
H+G+ FG
Sbjct: 1016 HLGQVFG 1022
116|SequenceR|585|576|VTLEWYHIGK
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 3 LEWYH 7
L+WYH
Sbjct: 889 LKWYH 893
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 3 LEWYH 7
L+WYH
Sbjct: 889 LKWYH 893
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 2 TLEWYHIGK 10
T +W+ IG+
Sbjct: 116 TADWFSIGQ 124
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 LEWYHIGK 10
L WYH K
Sbjct: 355 LPWYHPTK 362
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 LEWYHIGK 10
L WYH K
Sbjct: 357 LPWYHPTK 364
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 2 TLEWY 6
T+EWY
Sbjct: 488 TVEWY 492
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 LEWYHIGK 10
L WYH K
Sbjct: 355 LPWYHPTK 362
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 LEWYHIGK 10
L WYH K
Sbjct: 357 LPWYHPTK 364
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 3 LEWYHIGK 10
L W+HI +
Sbjct: 1813 LPWHHINR 1820
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 3 LEWYHIGK 10
L W+HI +
Sbjct: 1813 LPWHHINR 1820
>sp|YVBI_VACCC|UNCHARACTERIZED 7.6 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VTLEWYHIGK 10
+TL W H G+
Sbjct: 47 LTLSWGHAGQ 56
>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 3 LEWYHIG 9
LE+ HIG
Sbjct: 40 LEYVHIG 46
>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 3 LEWYHIG 9
LE+ HIG
Sbjct: 40 LEYVHIG 46
>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)
Query: 3 LEWYHIG 9
LE+ HIG
Sbjct: 40 LEYVHIG 46
>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 LEWYHIG 9
LE+ HIG
Sbjct: 40 LEYVHIG 46
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 3 LEWYHIG 9
LE+ HIG
Sbjct: 40 LEYVHIG 46
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 3 LEWYHIG 9
LE+ HIG
Sbjct: 40 LEYVHIG 46
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 6 YHIGK 10
YH+GK
Sbjct: 506 YHVGK 510
>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 YHIGK 10
YH+GK
Sbjct: 512 YHVGK 516
>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 YHIGK 10
YH+GK
Sbjct: 510 YHVGK 514
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 WYHIGK 10
W H+GK
Sbjct: 10 WQHLGK 15
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 WYHIGK 10
W H+GK
Sbjct: 10 WQHLGK 15
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 EWYH 7
+WYH
Sbjct: 2819 QWYH 2822
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 EWYH 7
+WYH
Sbjct: 2819 QWYH 2822
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 WYHIGK 10
W H+GK
Sbjct: 10 WQHLGK 15
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 VTLEWYH 7
V +WYH
Sbjct: 504 VNRDWYH 510
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 WYHIGK 10
W H+GK
Sbjct: 10 WQHLGK 15
>sp|XCORE_HBVC4|PUTATIVE X-Core fused protein|Hepatitis B virus genotype C
Query: 3 LEWYHI 8
L W+HI
Sbjct: 276 LLWFHI 281
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 3 LEWYHIGK 10
L W+H+ +
Sbjct: 1813 LPWHHVNR 1820
>sp|CAPSD_HBVH3|CAPSID protein|Hepatitis B virus genotype H
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 6 YHIGK 10
YH+GK
Sbjct: 142 YHLGK 146
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 6 YHIGK 10
YH+GK
Sbjct: 142 YHLGK 146
>sp|CAPSD_HBVF1|CAPSID protein|Hepatitis B virus genotype F2
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
>sp|CAPSD_HBVF6|CAPSID protein|Hepatitis B virus genotype F2
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
>sp|CAPSD_HBVC7|CAPSID protein|Hepatitis B virus genotype C
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
>sp|CAPSD_HBVC2|CAPSID protein|Hepatitis B virus genotype C
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
>sp|CAPSD_HBVG1|CAPSID protein|Hepatitis B virus genotype G
Query: 3 LEWYHI 8
L W+HI
Sbjct: 112 LLWFHI 117
>sp|CAPSD_HBVD4|CAPSID protein|Hepatitis B virus genotype D
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
>sp|CAPSD_HBVB8|CAPSID protein|Hepatitis B virus genotype B1
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
>sp|UL20_HCMVA|UNCHARACTERIZED protein UL20|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TLEWYH 7
T+EWY+
Sbjct: 175 TVEWYN 180
>sp|CAPSD_HBVG3|CAPSID protein|Hepatitis B virus genotype G
Query: 3 LEWYHI 8
L W+HI
Sbjct: 112 LLWFHI 117
>sp|CAPSD_HBVA8|CAPSID protein|Hepatitis B virus genotype A3
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
>sp|CAPSD_HBVG2|CAPSID protein|Hepatitis B virus genotype G
Query: 3 LEWYHI 8
L W+HI
Sbjct: 112 LLWFHI 117
>sp|CAPSD_HBVD2|CAPSID protein|Hepatitis B virus genotype D
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
>sp|CAPSD_HBVD1|CAPSID protein|Hepatitis B virus genotype D
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
>sp|CAPSD_HBVB3|CAPSID protein|Hepatitis B virus genotype B2
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
>sp|CAPSD_HBVCJ|CAPSID protein|Hepatitis B virus genotype C
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
>sp|CAPSD_HBVC5|CAPSID protein|Hepatitis B virus genotype C
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
>sp|CAPSD_HBVC4|CAPSID protein|Hepatitis B virus genotype C
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
>sp|CAPSD_HBVC3|CAPSID protein|Hepatitis B virus genotype C
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
>sp|CAPSD_HBVB4|CAPSID protein|Hepatitis B virus genotype B/C
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
>sp|CAPSD_HBVB2|CAPSID protein|Hepatitis B virus genotype B2
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
>sp|CAPSD_HBVA7|CAPSID protein|Hepatitis B virus genotype A2
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
>sp|CAPSD_HBVA5|CAPSID protein|Hepatitis B virus genotype A1
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
>sp|CAPSD_HBVA3|CAPSID protein|Hepatitis B virus genotype A2
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
>sp|CAPSD_HBVA2|CAPSID protein|Hepatitis B virus genotype A2
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
>sp|HBEAG_HBVH3|EXTERNAL core antigen|Hepatitis B virus genotype H
Query: 3 LEWYHI 8
L W+HI
Sbjct: 129 LLWFHI 134
>sp|CAPSD_HBVD5|CAPSID protein|Hepatitis B virus genotype D
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
>sp|HBEAG_HBVF6|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 3 LEWYHI 8
L W+HI
Sbjct: 129 LLWFHI 134
>sp|HBEAG_HBVF1|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 3 LEWYHI 8
L W+HI
Sbjct: 129 LLWFHI 134
>sp|CAPSD_HBVD6|CAPSID protein|Hepatitis B virus genotype D
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
>sp|CAPSD_HBVD3|CAPSID protein|Hepatitis B virus genotype D
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
>sp|CAPSD_HBVC8|CAPSID protein|Hepatitis B virus genotype C
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
>sp|CAPSD_HBVC9|CAPSID protein|Hepatitis B virus genotype C
Query: 3 LEWYHI 8
L W+HI
Sbjct: 100 LLWFHI 105
117|SequenceR|590|581|NDYRDVTLEW
>sp|VE6_HPV49|PROTEIN E6|Human papillomavirus type 49
Query: 2 DYRDVTLEW 10
DY+D L W
Sbjct: 41 DYKDFNLLW 49
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 DYRDVTLEW 10
DY D+ ++W
Sbjct: 441 DYSDIRIKW 449
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 DYRDVTLEW 10
DY D+ ++W
Sbjct: 441 DYSDIRIKW 449
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 DYRDVTLEW 10
DY D+ ++W
Sbjct: 441 DYSDIRIKW 449
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 DYRDVTLEW 10
DY D+ ++W
Sbjct: 441 DYSDIRIKW 449
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 DYRDVTLEW 10
DY D+ ++W
Sbjct: 441 DYSDIRIKW 449
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 DYRDVTLEW 10
DY D+ ++W
Sbjct: 441 DYSDIRIKW 449
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 DYRDVTLEW 10
DY D+ ++W
Sbjct: 441 DYSDIRIKW 449
>sp|TRX2_HHV7M|TRIPLEX capsid protein 2|Human herpesvirus 7 (strain MUK)
Query: 3 YRDVTLE 9
YRDVT++
Sbjct: 170 YRDVTIK 176
>sp|TRX2_HHV7J|TRIPLEX capsid protein 2|Human herpesvirus 7 (strain JI)
Query: 3 YRDVTLE 9
YRDVT++
Sbjct: 170 YRDVTIK 176
>sp|VE6_HPV47|PROTEIN E6|Human papillomavirus 47
Query: 2 DYRDVTLEW 10
DY+ +TL W
Sbjct: 56 DYKKLTLIW 64
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 3 YRDVTLEW 10
YRD+ +W
Sbjct: 83 YRDLEADW 90
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NDYRDVTLEW 10
+DYR EW
Sbjct: 769 DDYRATDDEW 778
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NDYRDVTLEW 10
+DYR EW
Sbjct: 769 DDYRATDDEW 778
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 NDYRDVT 7
N+Y+DVT
Sbjct: 207 NNYKDVT 213
>sp|VE6_HPV38|PROTEIN E6|Human papillomavirus 38
Query: 2 DYRDVTLEW 10
DY+++ L W
Sbjct: 43 DYKNLQLIW 51
>sp|VE6_HPV22|PROTEIN E6|Human papillomavirus 22
Query: 2 DYRDVTLEW 10
DY+++ L W
Sbjct: 67 DYKNLQLIW 75
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 NDYRDVTLEW 10
+++RD+ +W
Sbjct: 967 DEWRDLVRDW 976
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 DYRDVTLE 9
DY D+T E
Sbjct: 246 DYSDITPE 253
>sp|VE6_HPV5B|PROTEIN E6|Human papillomavirus type 5b
Query: 2 DYRDVTLEW 10
DY+ ++L W
Sbjct: 57 DYKKLSLIW 65
>sp|VU55_HHV6Z|UNCHARACTERIZED protein U55|Human herpesvirus 6B (strain Z29)
Query: 1 NDYRDVTLE 9
N Y+++TL+
Sbjct: 82 NSYQEITLK 90
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 2 DYRDVTLEW 10
DY+ VTL +
Sbjct: 798 DYKAVTLPY 806
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 NDYRDVTL 8
+DY+DV++
Sbjct: 1805 DDYKDVSV 1812
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 NDYRDVTLEW 10
+++RD+ +W
Sbjct: 966 DEWRDLMRDW 975
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 NDYRDVTLEW 10
+++RD+ +W
Sbjct: 966 DEWRDLMRDW 975
>sp|VE6_HPV05|PROTEIN E6|Human papillomavirus 5
Query: 2 DYRDVTLEW 10
DY+ ++L W
Sbjct: 57 DYKRLSLIW 65
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 NDYRDV 6
N YRD+
Sbjct: 1029 NQYRDI 1034
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 NDYRDV 6
N YRD+
Sbjct: 1029 NQYRDI 1034
>sp|RP18_VACCC|DNA-DIRECTED RNA polymerase 18 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NDYRDVTLE 9
N Y VTLE
Sbjct: 7 NGYLSVTLE 15
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 1 NDYRDVTL 8
+DYR +TL
Sbjct: 723 SDYRLITL 730
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DYRDVTL 8
DY+DV++
Sbjct: 1806 DYKDVSV 1812
118|SequenceR|595|586|APDPHNDYRD
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 5 HNDYRD 10
HN+YRD
Sbjct: 504 HNEYRD 509
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 DPHNDYR 9
DP NDY+
Sbjct: 1737 DPFNDYQ 1743
>sp|PG049_VAR67|PROTEIN OPG049|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 PDPHNDYR 9
P P +DYR
Sbjct: 164 PFPTDDYR 171
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 DPHNDYR 9
DP DYR
Sbjct: 113 DPEQDYR 119
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 DPHNDYR 9
DP DYR
Sbjct: 113 DPEQDYR 119
>sp|C_PI3H4|PROTEIN C|Human parainfluenza 3 virus (strain
Query: 1 APDPHNDYR 9
AP P YR
Sbjct: 34 APTPKKTYR 42
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 3 DPHNDYR 9
+PHN Y+
Sbjct: 686 NPHNHYK 692
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 PDPHNDY 8
PDP DY
Sbjct: 1409 PDPLADY 1415
>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)
Query: 1 APDPHNDY 8
A DPH DY
Sbjct: 94 ASDPHYDY 101
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 2 PDPHNDYRD 10
PD D+RD
Sbjct: 127 PDREYDFRD 135
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 PDPHNDYRD 10
PD D+RD
Sbjct: 127 PDREYDFRD 135
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 APDPHND 7
+ +PHND
Sbjct: 1359 SKNPHND 1365
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 DPHND 7
+PHND
Sbjct: 1197 NPHND 1201
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 DPHND 7
+PHND
Sbjct: 1361 NPHND 1365
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 DPHND 7
+PHND
Sbjct: 1361 NPHND 1365
>sp|PG049_VACCP|PROTEIN OPG049|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 PDPHNDYR 9
P P +DYR
Sbjct: 164 PFPTDDYR 171
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 PDPHNDYRD 10
PD D+RD
Sbjct: 127 PDREYDFRD 135
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 2 PDPHNDYRD 10
PD D+RD
Sbjct: 127 PDREYDFRD 135
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 DPHND 7
+PHND
Sbjct: 1361 NPHND 1365
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 DPHND 7
+PHND
Sbjct: 1361 NPHND 1365
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 PDPHNDYRD 10
PD ++YRD
Sbjct: 2035 PDVWDEYRD 2043
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 DPHND 7
+PHND
Sbjct: 1361 NPHND 1365
>sp|PG049_VACCC|PROTEIN OPG049|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PDPHNDYR 9
P P +DYR
Sbjct: 164 PFPTDDYR 171
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 PDPHNDYRD 10
PD D+RD
Sbjct: 127 PDREYDFRD 135
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 APDPHNDY 8
+PD H D+
Sbjct: 1804 SPDVHEDF 1811
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 2 PDPHNDYRD 10
PD D+RD
Sbjct: 127 PDREYDFRD 135
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 DPHND 7
+PHND
Sbjct: 1361 NPHND 1365
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 APDPHNDYR 9
PDP YR
Sbjct: 298 GPDPGPSYR 306
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 4 PHNDYR 9
PH YR
Sbjct: 401 PHEQYR 406
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 1 APDPHNDYR 9
PDP YR
Sbjct: 298 GPDPGPSYR 306
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 DPHND 7
+PHND
Sbjct: 1361 NPHND 1365
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 DPHND 7
+PHND
Sbjct: 1361 NPHND 1365
>sp|PG049_MONPV|PROTEIN OPG049|Monkeypox virus (MPXV)
Query: 2 PDPHNDYR 9
P P +DYR
Sbjct: 163 PFPTDDYR 170
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 3 DPHND 7
DPHN+
Sbjct: 1180 DPHNE 1184
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 APDPHNDYR 9
AP+P YR
Sbjct: 590 APEPQVTYR 598
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 DPHND 7
DPHN+
Sbjct: 1180 DPHNE 1184
>sp|GO_HHV6Z|130 kDa Glycoprotein O|Human herpesvirus 6B (strain Z29)
Query: 4 PHNDYR 9
P NDYR
Sbjct: 693 PGNDYR 698
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 3 DPHND 7
DPHN+
Sbjct: 1180 DPHNE 1184
>sp|VP6_ROTHG|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate RVC/Human/United
Query: 2 PDPHN 6
PDP+N
Sbjct: 239 PDPNN 243
>sp|VP6_ROTHF|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate
Query: 2 PDPHN 6
PDP+N
Sbjct: 239 PDPNN 243
>sp|VP6_ROTHC|INTERMEDIATE capsid protein VP6|Rotavirus C (isolate RVC/Human/United
Query: 2 PDPHN 6
PDP+N
Sbjct: 239 PDPNN 243
>sp|TEGU_HCMV|TEGUMENT protein|Human cytomegalovirus (HHV-5) (Human herpesvirus
Query: 1 APDPHNDYR 9
+P P ND R
Sbjct: 532 SPRPRNDTR 540
>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 DPHNDYR 9
D H+DY+
Sbjct: 69 DRHSDYQ 75
>sp|LMP2_EBVB9|LATENT membrane protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 DPHNDYR 9
D H+DY+
Sbjct: 69 DRHSDYQ 75
>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 DPHNDYR 9
D H+DY+
Sbjct: 69 DRHSDYQ 75
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 3 DPHNDY 8
D HND+
Sbjct: 746 DAHNDF 751
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 3 DPHNDY 8
D HND+
Sbjct: 746 DAHNDF 751
119|SequenceR|600|591|RAVGFAPDPH
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 1 RAVGFAPD 8
R+VGF PD
Sbjct: 442 RSVGFYPD 449
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 1 RAVGFAPD 8
R+VGF PD
Sbjct: 442 RSVGFYPD 449
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 RAVGFAPD 8
R+VGF PD
Sbjct: 442 RSVGFYPD 449
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RAVGFAPD 8
R+VGF PD
Sbjct: 442 RSVGFYPD 449
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 RAVGFAPD 8
R+VGF PD
Sbjct: 434 RSVGFYPD 441
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 1 RAVGFAPD 8
R+VGF PD
Sbjct: 442 RSVGFYPD 449
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 1 RAVGFAPD 8
R+VGF PD
Sbjct: 442 RSVGFYPD 449
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 1 RAVGFAPD 8
R+VGF PD
Sbjct: 442 RSVGFYPD 449
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 1 RAVGFAPD 8
R+VGF PD
Sbjct: 442 RSVGFYPD 449
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 VGFAPDP 9
+GFAP P
Sbjct: 486 IGFAPTP 492
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 3 VGFAPDPH 10
V F+P+PH
Sbjct: 1452 VKFSPEPH 1459
>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 2 AVGFAPD 8
AVGF PD
Sbjct: 449 AVGFVPD 455
>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 2 AVGFAPD 8
AVGF PD
Sbjct: 449 AVGFVPD 455
>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 2 AVGFAPD 8
AVGF PD
Sbjct: 449 AVGFVPD 455
>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)
Query: 2 AVGFAPD 8
AVGF PD
Sbjct: 449 AVGFVPD 455
>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 2 AVGFAPD 8
AVGF PD
Sbjct: 449 AVGFVPD 455
>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 2 AVGFAPD 8
AVGF PD
Sbjct: 449 AVGFVPD 455
>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)
Query: 2 AVGFAPD 8
AVGF PD
Sbjct: 449 AVGFVPD 455
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 RAVGFAPDPH 10
RA+G +P P
Sbjct: 1234 RALGLSPTPQ 1243
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 RAVGFAPDPH 10
RA+G +P P
Sbjct: 1231 RALGLSPTPQ 1240
>sp|SPIKE_ADE08|FIBER protein|Human adenovirus D serotype 8
Query: 1 RAVGFAPD 8
+A+GF P+
Sbjct: 278 KAIGFMPN 285
>sp|SPIKE_ADE1H|FIBER protein|Human adenovirus D serotype 15/H9
Query: 1 RAVGFAPD 8
+A+GF P+
Sbjct: 278 KAIGFMPN 285
>sp|SPIKE_ADE09|FIBER protein|Human adenovirus D serotype 9
Query: 1 RAVGFAPD 8
+A+GF P+
Sbjct: 278 KAIGFMPN 285
>sp|SPIKE_ADE15|FIBER protein|Human adenovirus D serotype 15
Query: 1 RAVGFAP 7
+AVGF P
Sbjct: 280 KAVGFMP 286
>sp|BZLF1_EBVA8|LYTIC switch protein BZLF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 VGFAPDPH 10
V F PDP+
Sbjct: 11 VKFTPDPY 18
>sp|SPIKE_ADE02|FIBER protein|Human adenovirus C serotype 2
Query: 2 AVGFAPD 8
AVGF P+
Sbjct: 494 AVGFMPN 500
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 RAVGFAPDPH 10
RA+G PD H
Sbjct: 622 RAMGRIPDYH 631
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 RAVGFAPDPH 10
RA+G PD H
Sbjct: 622 RAMGRIPDYH 631
>sp|SPIKE_ADE04|FIBER protein|Human adenovirus E serotype 4
Query: 2 AVGFAPD 8
AVGF P+
Sbjct: 343 AVGFMPN 349
>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5
Query: 2 AVGFAPD 8
AVGF P+
Sbjct: 494 AVGFMPN 500
120|SequenceR|605|596|KMVDMRAVGF
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 4 DMRAVGF 10
D+RAVG+
Sbjct: 826 DVRAVGY 832
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 4 DMRAVGF 10
D+RA+G+
Sbjct: 865 DVRAIGY 871
>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)
Query: 1 KMVDMRAVG 9
K+VD+R G
Sbjct: 471 KLVDVRLTG 479
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 KMVDMRAVGF 10
K+V++ +GF
Sbjct: 488 KLVEITPIGF 497
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 KMVDMRAVGF 10
K+V++ +GF
Sbjct: 485 KLVEITPIGF 494
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 KMVDMRAVGF 10
K+V++ +GF
Sbjct: 476 KLVEITPIGF 485
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 KMVDMRAVGF 10
K+V++ +GF
Sbjct: 477 KLVEITPIGF 486
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 KMVDMRAVGF 10
K+V++ +GF
Sbjct: 483 KLVEITPIGF 492
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 KMVDMRAVGF 10
K+V++ +GF
Sbjct: 487 KLVEITPIGF 496
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 KMVDMRAVGF 10
K+V++ +GF
Sbjct: 486 KLVEITPIGF 495
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 KMVDMRAVGF 10
K+V++ +GF
Sbjct: 477 KLVEVTPIGF 486
121|SequenceR|610|601|GLMVDKMVDM
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GLMVDKMV 8
G+MV KMV
Sbjct: 1257 GMMVLKMV 1264
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GLMVDKMV 8
G+MV KMV
Sbjct: 1257 GMMVLKMV 1264
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 GLMVDKMV 8
G+MV KMV
Sbjct: 1257 GMMVLKMV 1264
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GLMVDKMV 8
G+MV KMV
Sbjct: 1257 GMMVLKMV 1264
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GLMVDKMV 8
G+MV KMV
Sbjct: 1257 GMMVLKMV 1264
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GLMVDKMV 8
G+MV KMV
Sbjct: 1257 GMMVLKMV 1264
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GLMVDKMV 8
G+MV KMV
Sbjct: 977 GMMVLKMV 984
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 4 VDKMVDM 10
VDK VD+
Sbjct: 704 VDKFVDL 710
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 VDKMVDM 10
VDK VD+
Sbjct: 705 VDKFVDL 711
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 4 VDKMVDM 10
VDK VD+
Sbjct: 704 VDKFVDL 710
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 VDKMVDM 10
VDK VD+
Sbjct: 704 VDKFVDL 710
122|SequenceR|615|606|AKDDKGLMVD
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 AKDDKGLMV 9
+ DD G+M+
Sbjct: 1136 SSDDSGMMI 1144
>sp|CRMB_VARV|CYTOKINE response-modifying protein B|Variola virus
Query: 1 AKDDKGLM 8
AK+D G+M
Sbjct: 274 AKNDDGMM 281
>sp|CRMB_VAR67|CYTOKINE response-modifying protein B|Variola virus (isolate
Query: 1 AKDDKGLM 8
AK+D G+M
Sbjct: 274 AKNDDGMM 281
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 AKDDKG 6
A+DDKG
Sbjct: 2803 ARDDKG 2808
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 AKDDKG 6
A+DDKG
Sbjct: 2803 ARDDKG 2808
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 1 AKDDKG 6
A+DDKG
Sbjct: 2 AQDDKG 7
123|SequenceR|620|611|VYMAWAKDDK
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 VYMAWAKD 8
V+M WA D
Sbjct: 2117 VWMPWATD 2124
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 4 AWAKDDK 10
+WAKD K
Sbjct: 139 SWAKDSK 145
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 4 AWAKDDK 10
+WAKD K
Sbjct: 139 SWAKDSK 145
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 3 MAWAKD 8
+AWA+D
Sbjct: 653 LAWARD 658
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 3 MAWAKD 8
+AWA+D
Sbjct: 653 LAWARD 658
>sp|GC_HHV1K|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain KOS)
Query: 2 YMAWAKDD 9
Y+AW + D
Sbjct: 243 YLAWGRMD 250
>sp|GC_HHV11|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain 17)
Query: 2 YMAWAKDD 9
Y+AW + D
Sbjct: 243 YLAWGRMD 250
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 VYMAWAKDD 9
V +W++DD
Sbjct: 2936 VKASWSRDD 2944
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 YMAWAKDD 9
+M W KD+
Sbjct: 6412 WMLWCKDN 6419
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 YMAWAKDDK 10
+M W D+K
Sbjct: 6779 FMLWCNDEK 6787
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 YMAWAKDDK 10
+M W D+K
Sbjct: 6816 FMLWCNDNK 6824
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 YMAWAKDDK 10
+M W D+K
Sbjct: 6836 FMLWCNDNK 6844
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 YMAWAKDDK 10
+M W D+K
Sbjct: 6866 FMLWCNDNK 6874
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 YMAWAKD 8
+M W KD
Sbjct: 6758 FMLWCKD 6764
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 YMAWAKD 8
+M W KD
Sbjct: 6781 FMLWCKD 6787
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 YMAWAKDD 9
+M W KD+
Sbjct: 6441 WMLWCKDN 6448
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 4 AWAKDD 9
AW +DD
Sbjct: 414 AWLRDD 419
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 4 AWAKDD 9
AW +DD
Sbjct: 414 AWLRDD 419
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 YMAWAKD 8
+M W KD
Sbjct: 6758 FMLWCKD 6764
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 5 WAKDDK 10
WA DD+
Sbjct: 1084 WADDDR 1089
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 VYMAWAKDD 9
+Y++W+ D
Sbjct: 2048 IYLSWSWSD 2056
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 VYMAWAKDD 9
+Y++W+ D
Sbjct: 2047 IYLSWSWSD 2055
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 5 WAKDDK 10
WA DD+
Sbjct: 992 WADDDR 997
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 VYMAWAKDD 9
+Y++W+ D
Sbjct: 2047 IYLSWSWSD 2055
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 VYMAWAKDD 9
+Y++W+ D
Sbjct: 2047 IYLSWSWSD 2055
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 VYMAWAKDD 9
+Y++W+ D
Sbjct: 2047 IYLSWSWSD 2055
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 VYMAWAKDD 9
+Y++W+ D
Sbjct: 2048 IYLSWSWSD 2056
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 VYMAWAKDD 9
+Y++W+ D
Sbjct: 2047 IYLSWSWSD 2055
>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)
Query: 1 VYMAWAKDD 9
+ +AW KD+
Sbjct: 129 IALAWNKDE 137
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VYMAWAKDDK 10
VY+AW K
Sbjct: 1124 VYLAWVPAHK 1133
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VYMAWAKDDK 10
VY+AW K
Sbjct: 1130 VYLAWVPAHK 1139
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VYMAWAKDDK 10
VY+AW K
Sbjct: 1119 VYLAWVPAHK 1128
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VYMAWAKDDK 10
VY+AW K
Sbjct: 1130 VYLAWVPAHK 1139
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VYMAWAKDDK 10
VY+AW K
Sbjct: 1118 VYLAWVPAHK 1127
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VYMAWAKDDK 10
VY+AW K
Sbjct: 1122 VYLAWVPAHK 1131
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VYMAWAKDDK 10
VY+AW K
Sbjct: 1118 VYLAWVPAHK 1127
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VYMAWAKDDK 10
VY+AW K
Sbjct: 1130 VYLAWVPAHK 1139
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VYMAWAKDDK 10
VY+AW K
Sbjct: 1120 VYLAWVPAHK 1129
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VYMAWAKDDK 10
VY+AW K
Sbjct: 1118 VYLAWVPAHK 1127
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VYMAWAKDDK 10
VY+AW K
Sbjct: 1115 VYLAWVPAHK 1124
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VYMAWAKDDK 10
VY+AW K
Sbjct: 1118 VYLAWVPAHK 1127
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VYMAWAKDDK 10
VY+AW K
Sbjct: 1118 VYLAWVPAHK 1127
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VYMAWAKDDK 10
VY+AW K
Sbjct: 1141 VYVAWVPAHK 1150
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VYMAWAKDDK 10
VY+AW K
Sbjct: 1117 VYLAWVPAHK 1126
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VYMAWAKDDK 10
VY+AW K
Sbjct: 1119 VYLAWVPAHK 1128
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VYMAWAKDDK 10
VY+AW K
Sbjct: 1142 VYVAWVPAHK 1151
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VYMAWAKDDK 10
VY+AW K
Sbjct: 1140 VYVAWVPAHK 1149
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VYMAWAKDDK 10
VY+AW K
Sbjct: 1118 VYLAWVPAHK 1127
124|SequenceR|625|616|SRNNDVYMAW
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SRNNDVY 7
+R NDVY
Sbjct: 682 NRKNDVY 688
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SRNNDVY 7
+R NDVY
Sbjct: 681 NRKNDVY 687
>sp|GK_HHV1R|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R15)
Query: 3 NNDVYMAW 10
NND + W
Sbjct: 47 NNDTALVW 54
>sp|GK_HHV1M|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain MP)
Query: 3 NNDVYMAW 10
NND + W
Sbjct: 47 NNDTALVW 54
>sp|GK_HHV1K|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain KOS)
Query: 3 NNDVYMAW 10
NND + W
Sbjct: 47 NNDTALVW 54
>sp|GK_HHV19|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R19)
Query: 3 NNDVYMAW 10
NND + W
Sbjct: 47 NNDTALVW 54
>sp|GK_HHV11|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain 17)
Query: 3 NNDVYMAW 10
NND + W
Sbjct: 47 NNDTALVW 54
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 SRNNDVYM 8
+RNND ++
Sbjct: 1679 NRNNDTFI 1686
>sp|VU84_HHV6U|PROTEIN U84|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RNNDVY 7
RNN++Y
Sbjct: 85 RNNEIY 90
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 2 RNNDVYM 8
RNN +Y+
Sbjct: 1794 RNNTIYI 1800
>sp|NCAP_CHAV|NUCLEOPROTEIN virus (strain I653514) (CHPV)
Query: 2 RNNDVYMAW 10
RN V++AW
Sbjct: 374 RNVVVWLAW 382
>sp|TRX1_HCMVM|TRIPLEX capsid protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 DVYMAW 10
D+Y+ W
Sbjct: 170 DMYLTW 175
>sp|TRX1_HCMVA|TRIPLEX capsid protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 DVYMAW 10
D+Y+ W
Sbjct: 170 DMYLTW 175
>sp|ORF23_TTVV2|PROBABLE protein VP2|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 2 RNNDVYMAW 10
RN+ Y+ W
Sbjct: 6 RNDQQYLNW 14
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 RNNDVYMAW 10
RNN +AW
Sbjct: 2074 RNNTGMIAW 2082
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 RNNDVYMA 9
++NDVY++
Sbjct: 1647 KSNDVYIS 1654
>sp|ORF23_TTVV1|PROBABLE protein VP2|Torque teno virus (strain VT416)
Query: 2 RNNDVYMAW 10
RN+ Y+ W
Sbjct: 6 RNDQHYLNW 14
125|SequenceR|630|621|NHMFWSRNND
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 1 NHMFWSRNN 9
+H +W+R+N
Sbjct: 138 HHNYWTRSN 146
>sp|PG049_VAR67|PROTEIN OPG049|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 NHMFWSRNN 9
NH FW NN
Sbjct: 41 NHTFWYYNN 49
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 NHMFW 5
NH FW
Sbjct: 3137 NHAFW 3141
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 NHMFW 5
NH FW
Sbjct: 3137 NHAFW 3141
>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 4 FWSRNND 10
WS+ ND
Sbjct: 77 LWSKTND 83
>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New
Query: 4 FWSRNND 10
WS+ ND
Sbjct: 77 LWSKTND 83
>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 4 FWSRNND 10
WS+ ND
Sbjct: 77 LWSKTND 83
>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 4 FWSRNND 10
WS+ ND
Sbjct: 77 LWSKTND 83
>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 4 FWSRNND 10
WS+ ND
Sbjct: 77 LWSKTND 83
>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 4 FWSRNND 10
WS+ ND
Sbjct: 77 LWSKTND 83
>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 4 FWSRNND 10
WS+ ND
Sbjct: 77 LWSKTND 83
>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 4 FWSRNND 10
WS+ ND
Sbjct: 77 LWSKTND 83
>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 4 FWSRNND 10
WS+ ND
Sbjct: 76 LWSKTND 82
>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 4 FWSRNND 10
WS+ ND
Sbjct: 77 LWSKTND 83
>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 4 FWSRNND 10
WS+ ND
Sbjct: 71 LWSKTND 77
>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 4 FWSRNND 10
WS+ ND
Sbjct: 77 LWSKTND 83
>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 4 FWSRNND 10
WS+ ND
Sbjct: 70 LWSKTND 76
>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong
Query: 4 FWSRNND 10
WS+ ND
Sbjct: 77 LWSKTND 83
>sp|PB2S1_I96A0|PB2-S1 A virus (strain A/Goose/Guangdong/1/1996
Query: 4 FWSRNND 10
WS+ ND
Sbjct: 77 LWSKTND 83
>sp|PB2S1_I18A0|PB2-S1 A virus (strain A/Brevig
Query: 4 FWSRNND 10
WS+ ND
Sbjct: 77 LWSKTND 83
>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 4 FWSRNND 10
WS+ ND
Sbjct: 77 LWSKTND 83
>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 4 FWSRNND 10
WS+ ND
Sbjct: 77 LWSKTND 83
>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 4 FWSRNND 10
WS+ ND
Sbjct: 77 LWSKTND 83
>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 4 FWSRNND 10
WS+ ND
Sbjct: 77 LWSKTND 83
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 4 FWSRNND 10
WS+ ND
Sbjct: 77 LWSKTND 83
>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 4 FWSRNND 10
WS+ ND
Sbjct: 77 LWSKTND 83
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 4 FWSRNND 10
WS+ ND
Sbjct: 77 LWSKTND 83
>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea
Query: 4 FWSRNND 10
WS+ ND
Sbjct: 69 LWSKTND 75
>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 4 FWSRNND 10
WS+ ND
Sbjct: 77 LWSKTND 83
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 HMFWSR 7
MFWS+
Sbjct: 772 QMFWSQ 777
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 3 MFWSRN 8
+FW+RN
Sbjct: 470 LFWARN 475
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 MFWSRN 8
+FW+RN
Sbjct: 470 LFWARN 475
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 3 MFWSRN 8
+FW+RN
Sbjct: 470 LFWARN 475
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 5 WSRNND 10
W++NND
Sbjct: 220 WNQNND 225
>sp|FUS_PI2HT|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 1 NHMFWSRNN 9
N F+S+NN
Sbjct: 535 NPAFFSKNN 543
>sp|FUS_PI2HG|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 1 NHMFWSRNN 9
N F+S+NN
Sbjct: 535 NPAFFSKNN 543
>sp|FUS_PI2H|FUSION glycoprotein F0|Human parainfluenza 2 virus (HPIV-2)
Query: 1 NHMFWSRNN 9
N F+S+NN
Sbjct: 535 NPAFFSKNN 543
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 HMFWSRNND 10
H F+++N D
Sbjct: 4477 HFFFAQNGD 4485
>sp|CEP1_HHV6Z|CYTOPLASMIC envelopment protein 1|Human herpesvirus 6B (strain Z29)
Query: 2 HMFWSRNND 10
+F+S+N D
Sbjct: 238 QIFYSKNED 246
>sp|CAHH_MONPV|CELL surface-binding protein OPG105|Monkeypox virus (MPXV)
Query: 2 HMFWSRNND 10
H++W + +D
Sbjct: 67 HIYWGKEDD 75
>sp|CAHH_MONPZ|CELL surface-binding protein OPG105|Monkeypox virus (strain
Query: 2 HMFWSRNND 10
H++W + +D
Sbjct: 67 HIYWGKEDD 75
>sp|CAHH_VACCC|CELL surface-binding protein OPG105|Vaccinia virus (strain Copenhagen)
Query: 2 HMFWSRNND 10
H++W + +D
Sbjct: 67 HIYWGKEDD 75
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 4 FWSRNN 9
FW+R+N
Sbjct: 138 FWTRSN 143
>sp|CAHH_VACCT|CELL surface-binding protein OPG105|Vaccinia virus (strain Tian Tan)
Query: 2 HMFWSRNND 10
H++W + +D
Sbjct: 67 HIYWGKEDD 75
>sp|CAHH_VARV|CELL surface-binding protein OPG105|Variola virus
Query: 2 HMFWSRNND 10
H++W + +D
Sbjct: 67 HIYWGKEDD 75
>sp|CAHH_VAR67|CELL surface-binding protein OPG105|Variola virus (isolate
Query: 2 HMFWSRNND 10
H++W + +D
Sbjct: 67 HIYWGKEDD 75
>sp|E321_ADE1A|EARLY E3 20.2 kDa glycoprotein|Human adenovirus B serotype 11
Query: 2 HMFWSRNND 10
H+FW R D
Sbjct: 40 HVFWWRIYD 48
>sp|E321_ADE1P|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 11
Query: 2 HMFWSRNND 10
H+FW R D
Sbjct: 40 HVFWWRIYD 48
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 5 WSRNN 9
WSR+N
Sbjct: 142 WSRSN 146
>sp|CVC1_HHV6U|CAPSID vertex component 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 FWSRNN 9
FW R N
Sbjct: 263 FWDRTN 268
>sp|E321_ADE35|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 35
Query: 2 HMFWSRNND 10
H+FW R D
Sbjct: 40 HVFWWRIYD 48
126|SequenceR|635|626|NTHSNNHMFW
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 5 NNHMFW 10
+NH FW
Sbjct: 3136 SNHAFW 3141
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 5 NNHMFW 10
+NH FW
Sbjct: 3136 SNHAFW 3141
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 HSNNHMFW 10
+SN+ M+W
Sbjct: 2743 NSNHEMYW 2750
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 HSNNHMFW 10
+SN+ M+W
Sbjct: 2741 NSNHEMYW 2748
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 HSNNHMFW 10
+SN+ M+W
Sbjct: 2741 NSNHEMYW 2748
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 THSNNHM 8
TH+N H+
Sbjct: 2967 THTNTHL 2973
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 3 HSNNHMFW 10
+SN+ M+W
Sbjct: 2743 NSNHEMYW 2750
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 HSNNHMFW 10
+SN+ M+W
Sbjct: 2741 NSNHEMYW 2748
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 HSNNHMFW 10
+SN+ M+W
Sbjct: 2741 NSNHEMYW 2748
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 3 HSNNHMFW 10
+SN+ M+W
Sbjct: 2734 NSNHEMYW 2741
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 4 SNNHMFW 10
S+N++FW
Sbjct: 1991 SHNYLFW 1997
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 3 HSNNHMF 9
H N H+F
Sbjct: 635 HGNEHVF 641
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 THSNNHMFW 10
T +NN M W
Sbjct: 2165 TGTNNIMLW 2173
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 5 NNHMF 9
NNH+F
Sbjct: 2002 NNHLF 2006
>sp|PG091_MONPV|PROTEIN OPG091|Monkeypox virus (MPXV)
Query: 4 SNNHMFW 10
SNN FW
Sbjct: 152 SNNLTFW 158
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 NTHSNNHMF 9
N H+ H+F
Sbjct: 3033 NVHTPKHVF 3041
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 NTHSNNHMF 9
N H+ H+F
Sbjct: 3033 NVHTPKHVF 3041
>sp|PG091_VACCC|PROTEIN OPG091|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 SNNHMFW 10
SNN FW
Sbjct: 152 SNNLTFW 158
>sp|VP7_ROTGI|OUTER capsid glycoprotein VP7|Rotavirus B (isolate RVB/Rat/United
Query: 3 HSNNHMF 9
HSN+H +
Sbjct: 177 HSNDHFY 183
>sp|UL92_HHV6U|PROTEIN U63|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 THSNNHM 8
TH NN M
Sbjct: 16 THKNNQM 22
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 THSNNHMF 9
TH +NH +
Sbjct: 2793 THDSNHPY 2800
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 NTHSNNHM 8
N H N H+
Sbjct: 5853 NVHRNEHV 5860
>sp|UL92_HHV6Z|PROTEIN U63|Human herpesvirus 6B (strain Z29)
Query: 2 THSNNHM 8
TH NN M
Sbjct: 18 THKNNQM 24
127|SequenceR|640|631|GGETRNTHSN
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 GGETRNTHSN 10
GG+ N HSN
Sbjct: 882 GGDAGNLHSN 891
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 GGETRNTHSN 10
GG+ N HSN
Sbjct: 879 GGDPGNLHSN 888
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GETRNTHSN 10
G+TR H N
Sbjct: 324 GDTRKAHCN 332
>sp|W_NIPAV|PROTEIN W|Nipah virus
Query: 1 GGETRNTH 8
G +TRN H
Sbjct: 407 GAQTRNIH 414
>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)
Query: 2 GETRNTHSN 10
G T+N +SN
Sbjct: 255 GSTKNINSN 263
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GETRNTHSN 10
+ +NTH+N
Sbjct: 964 AKVKNTHTN 972
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GETRNTHSN 10
+ +NTH+N
Sbjct: 965 AKVKNTHTN 973
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GETRNTHSN 10
+ +NTH+N
Sbjct: 963 AKVKNTHTN 971
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GETRNTHSN 10
+ +NTH+N
Sbjct: 965 AKVKNTHTN 973
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GETRNTHSN 10
+ +NTH+N
Sbjct: 966 AKVKNTHTN 974
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GETRNTHSN 10
+ +NTH+N
Sbjct: 965 AKIKNTHTN 973
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GETRNTHSN 10
+ +NTH+N
Sbjct: 964 AKIKNTHTN 972
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GETRNTHSN 10
+ +NTH+N
Sbjct: 966 AKIKNTHTN 974
>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GETRNTHSN 10
+ +NTH+N
Sbjct: 964 AKIKNTHTN 972
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GETRNTHSN 10
+ +NTH+N
Sbjct: 965 AKIKNTHTN 973
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 1 GGETRNTH 8
GG R TH
Sbjct: 350 GGSGRGTH 357
>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 1 GGETRN 6
GGE RN
Sbjct: 246 GGEVRN 251
>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 1 GGETRN 6
GGE RN
Sbjct: 240 GGEVRN 245
>sp|PB2S1_I96A0|PB2-S1 A virus (strain A/Goose/Guangdong/1/1996
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2S1_I34A1|PB2-S1 A virus (strain A/Puerto
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2S1_I18A0|PB2-S1 A virus (strain A/Brevig
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 GGETRN 6
GGE RN
Sbjct: 241 GGEVRN 246
>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea
Query: 1 GGETRN 6
GGE RN
Sbjct: 239 GGEVRN 244
>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 GETRNTHS 9
GET THS
Sbjct: 706 GETFVTHS 713
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 GETRNTHS 9
GET THS
Sbjct: 706 GETFVTHS 713
>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEVRN 252
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEARN 252
>sp|PB2S1_I33A0|PB2-S1 A virus (strain A/Wilson-Smith/1933
Query: 1 GGETRN 6
GGE RN
Sbjct: 247 GGEARN 252
128|SequenceR|645|636|AGKTIGGETR
>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21
Query: 1 AGKTIGGET 9
G+TIGG T
Sbjct: 213 GGQTIGGST 221
>sp|VL2_HPV14|MINOR capsid protein L2|Human papillomavirus 14
Query: 1 AGKTIGGET 9
G+TIGG T
Sbjct: 213 GGQTIGGAT 221
>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40
Query: 2 GKTIGGE 8
GK++GGE
Sbjct: 256 GKSLGGE 262
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 2 GKTIGGE 8
G+T+GG+
Sbjct: 1119 GRTVGGQ 1125
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 GKTIGGETR 10
GK +GG +R
Sbjct: 197 GKPVGGRSR 205
>sp|PRO_ADE03|PROTEASE adenovirus B serotype 3
Query: 1 AGKTIGGE 8
AG+ GGE
Sbjct: 52 AGRETGGE 59
>sp|NRAM_I78A7|NEURAMINIDASE A virus (strain A/Memphis/2/1978
Query: 2 GKTIGGETR 10
G+TI E+R
Sbjct: 363 GRTISDESR 371
>sp|NRAM_I78A8|NEURAMINIDASE A virus (strain A/Memphis/18/1978
Query: 2 GKTIGGETR 10
G+TI E+R
Sbjct: 363 GRTISDESR 371
>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1
Query: 3 KTIGGETR 10
KTIGG +
Sbjct: 376 KTIGGRLK 383
>sp|PRO_ADE04|PROTEASE adenovirus E serotype 4
Query: 1 AGKTIGGE 8
AG+ GGE
Sbjct: 48 AGRETGGE 55
>sp|VL2_HPV25|MINOR capsid protein L2|Human papillomavirus 25
Query: 1 AGKTIGG 7
G+TIGG
Sbjct: 212 GGQTIGG 218
>sp|VL2_HPV34|MINOR capsid protein L2|Human papillomavirus type 34
Query: 1 AGKTIGG 7
+GK IGG
Sbjct: 318 SGKRIGG 324
>sp|VL2_HPV45|MINOR capsid protein L2|Human papillomavirus 45
Query: 1 AGKTIGG 7
+GK IGG
Sbjct: 309 SGKQIGG 315
129|SequenceR|650|641|LVGITAGKTI
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 LVGITAGK 8
L GITAG+
Sbjct: 867 LKGITAGQ 874
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 LVGITAGK 8
L GITAG+
Sbjct: 867 LKGITAGQ 874
>sp|ICP27_HHV2H|MRNA export factor|Human herpesvirus 2 (strain HG52)
Query: 2 VGITAGKTI 10
VG+ AG+T+
Sbjct: 452 VGVGAGETM 460
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 3 GITAGKTI 10
G+T G+TI
Sbjct: 367 GLTNGETI 374
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 GITAGKTI 10
G+T G+TI
Sbjct: 367 GLTNGETI 374
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 GITAGKTI 10
G+T G+TI
Sbjct: 367 GLTNGETI 374
130|SequenceR|655|646|RNLDLLVGIT
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RNLDLLVG 8
R++DLLVG
Sbjct: 260 RHIDLLVG 267
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 1 RNLDLLVG 8
R++DLLVG
Sbjct: 260 RHIDLLVG 267
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 RNLDLLVG 8
R++DLLVG
Sbjct: 260 RHIDLLVG 267
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 RNLDLLVG 8
R++DLLVG
Sbjct: 260 RHIDLLVG 267
>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)
Query: 1 RNLDLLVG 8
R++DLLVG
Sbjct: 132 RHIDLLVG 139
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 RNLDLLVG 8
R++DLLVG
Sbjct: 260 RHVDLLVG 267
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RNLDLLVG 8
R++DLLVG
Sbjct: 260 RHVDLLVG 267
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RNLDLLVG 8
R++DLLVG
Sbjct: 260 RHVDLLVG 267
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RNLDLLVG 8
R++DLLVG
Sbjct: 260 RHVDLLVG 267
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RNLDLLVG 8
R++DLLVG
Sbjct: 260 RHVDLLVG 267
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RNLDLLVG 8
R++DLLVG
Sbjct: 260 RHVDLLVG 267
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 1 RNLDLLVG 8
R++DLLVG
Sbjct: 260 RHVDLLVG 267
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 1 RNLDLLVG 8
R++DLLVG
Sbjct: 260 RHVDLLVG 267
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 1 RNLDLLVG 8
R++DLLVG
Sbjct: 260 RHVDLLVG 267
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RNLDLLVG 8
R++DLLVG
Sbjct: 260 RHVDLLVG 267
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RNLDLLVG 8
R++DLLVG
Sbjct: 260 RHVDLLVG 267
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 1 RNLDLLVG 8
R++DLLVG
Sbjct: 144 RHIDLLVG 151
>sp|POLG_HCVE1|GENOME polyprotein|Hepatitis C virus (isolate EC1)
Query: 1 RNLDLLVG 8
R++DLLVG
Sbjct: 144 RHIDLLVG 151
>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)
Query: 1 RNLDLLVG 8
R++DLLVG
Sbjct: 144 RHIDLLVG 151
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 RNLDLLVG 8
R++DL+VG
Sbjct: 260 RHVDLMVG 267
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 RNLDLLVG 8
R++DL+VG
Sbjct: 260 RHVDLIVG 267
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 2 NLDLLVG 8
NLD LVG
Sbjct: 113 NLDRLVG 119
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 3 LDLLVGIT 10
L+LL+GI+
Sbjct: 20 LNLLIGIS 27
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 3 LDLLVGIT 10
L+LL+GI+
Sbjct: 20 LNLLIGIS 27
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 2 NLDLLVG 8
NLD LVG
Sbjct: 113 NLDRLVG 119
>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)
Query: 5 LLVGIT 10
LLVGIT
Sbjct: 274 LLVGIT 279
>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)
Query: 5 LLVGIT 10
LLVGIT
Sbjct: 274 LLVGIT 279
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 RNLDLLVGIT 10
RNL+ L+G T
Sbjct: 572 RNLNSLMGRT 581
131|SequenceR|660|651|FTLNKRNLDL
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 FTLNKRNL 8
F+L KRN+
Sbjct: 4591 FSLTKRNI 4598
Query: 2 TLNKRNLDL 10
++N+R LD+
Sbjct: 5483 SINRRQLDV 5491
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 1 FTLNKRNLDL 10
F+L+K N++L
Sbjct: 842 FSLSKENMEL 851
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 1 FTLNKRNLDL 10
F+L+K N++L
Sbjct: 842 FSLSKENMEL 851
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 4 NKRNLDL 10
N+R LDL
Sbjct: 515 NRRGLDL 521
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 4 NKRNLDL 10
N+R LDL
Sbjct: 515 NRRGLDL 521
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 4 NKRNLDL 10
N+R LDL
Sbjct: 515 NRRGLDL 521
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 4 NKRNLDL 10
N+R LDL
Sbjct: 374 NRRGLDL 380
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 4 NKRNLDL 10
N+R LDL
Sbjct: 381 NRRGLDL 387
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 4 NKRNLDL 10
N+R LDL
Sbjct: 379 NRRGLDL 385
>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 4 NKRNLDL 10
N+R LDL
Sbjct: 378 NRRGLDL 384
>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 4 NKRNLDL 10
N+R LDL
Sbjct: 378 NRRGLDL 384
>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 4 NKRNLDL 10
N+R LDL
Sbjct: 378 NRRGLDL 384
>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 4 NKRNLDL 10
N+R LDL
Sbjct: 378 NRRGLDL 384
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 4 NKRNLDL 10
N+R LDL
Sbjct: 378 NRRGLDL 384
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 4 NKRNLDL 10
N+R LDL
Sbjct: 378 NRRGLDL 384
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 2 TLNKRN 7
TLNKRN
Sbjct: 472 TLNKRN 477
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 2 TLNKRNL 8
TLNKR++
Sbjct: 218 TLNKRSI 224
132|SequenceR|665|656|EDNIFFTLNK
>sp|UL92_HCMVM|UNCHARACTERIZED protein UL92|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 EDNIFFTLNK 10
ED+I+FT NK
Sbjct: 124 EDSIYFTFNK 133
>sp|UL92_HCMVA|PROTEIN UL92|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 EDNIFFTLNK 10
ED+I+FT NK
Sbjct: 124 EDSIYFTFNK 133
>sp|UL92_HHV6Z|PROTEIN U63|Human herpesvirus 6B (strain Z29)
Query: 1 EDNIFFTLN 9
ED +F+T N
Sbjct: 146 EDAVFYTFN 154
>sp|UL92_HHV6U|PROTEIN U63|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 EDNIFFTLN 9
ED +F+T N
Sbjct: 144 EDAVFYTFN 152
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 1 EDNIFFTL 8
EDNI FT+
Sbjct: 1063 EDNIRFTI 1070
>sp|PG172_VACCC|PROTEIN A43|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 EDNIFFT 7
+DN+FFT
Sbjct: 74 DDNVFFT 80
>sp|PG172_MONPV|PROTEIN OPG172|Monkeypox virus (MPXV)
Query: 1 EDNIFFT 7
+DN+FFT
Sbjct: 75 DDNVFFT 81
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 1 EDNIFFTL 8
EDNI FT+
Sbjct: 1063 EDNIRFTV 1070
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 EDNIFFTL 8
EDNI FT+
Sbjct: 1063 EDNIRFTV 1070
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 EDNIFFTL 8
EDNI FT+
Sbjct: 1063 EDNIRFTV 1070
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 EDNIFFTL 8
EDNI FT+
Sbjct: 1063 EDNIRFTV 1070
>sp|U17_HHV6U|PROTEIN U17|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 IFFTLNK 10
+FF LNK
Sbjct: 99 LFFLLNK 105
133|SequenceR|670|661|IPGQQEDNIF
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 IPGQQEDNIF 10
IPGQ+E +F
Sbjct: 1873 IPGQRELKLF 1882
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 IPGQQEDNIF 10
IPGQ+E +F
Sbjct: 1873 IPGQRELRLF 1882
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 3 GQQEDN 8
GQ EDN
Sbjct: 144 GQDEDN 149
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 3 GQQEDN 8
GQ EDN
Sbjct: 144 GQDEDN 149
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 PGQQEDNIF 10
PG + NI+
Sbjct: 2126 PGASDSNIY 2134
134|SequenceR|675|666|VNDFAIPGQQ
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 VNDFAIPGQQ 10
V+DF +PG +
Sbjct: 704 VDDFTLPGPE 713
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 DFAIPGQ 9
+FA+PG+
Sbjct: 214 EFAVPGR 220
>sp|F13_MCV2|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 2
Query: 1 VNDFAIPGQQ 10
V FAIPG +
Sbjct: 300 VRVFAIPGAK 309
>sp|F13_MCV1|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 1
Query: 1 VNDFAIPGQQ 10
V FAIPG +
Sbjct: 300 VRVFAIPGAK 309
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 3 DFAIP 7
DFAIP
Sbjct: 682 DFAIP 686
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 VNDFAIPG 8
VND PG
Sbjct: 91 VNDLCYPG 98
>sp|CVC1_HHV6Z|CAPSID vertex component 1|Human herpesvirus 6B (strain Z29)
Query: 3 DFAIPG 8
DF +PG
Sbjct: 412 DFVLPG 417
>sp|E1BS_ADE07|E1B protein, small T-antigen|Human adenovirus B serotype 7
Query: 1 VNDFAIPGQ 9
V DF+ PG+
Sbjct: 80 VLDFSTPGR 88
>sp|CVC1_HHV6U|CAPSID vertex component 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 DFAIPG 8
DF +PG
Sbjct: 412 DFVLPG 417
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 2 NDFAIPG 8
NDF IP
Sbjct: 285 NDFYIPA 291
135|SequenceR|680|671|FFLGEVNDFA
>sp|UL12_HCMVA|UNCHARACTERIZED protein UL12|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 FLGEVNDF 9
FLG VN F
Sbjct: 5 FLGPVNSF 12
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 1 FFLGEVNDF 9
F G+VN+F
Sbjct: 371 FSFGKVNNF 379
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 3 LGEVNDF 9
LGE+ DF
Sbjct: 1876 LGELTDF 1882
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 3 LGEVNDF 9
LGE+ DF
Sbjct: 1872 LGELTDF 1878
>sp|VP24_EBOSU|MEMBRANE-ASSOCIATED protein VP24|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 5 EVNDFA 10
+VNDFA
Sbjct: 61 KVNDFA 66
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 EVNDFA 10
EVN+FA
Sbjct: 867 EVNEFA 872
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 EVNDFA 10
EVN+FA
Sbjct: 867 EVNEFA 872
>sp|UL84_HCMVA|PROTEIN UL84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LGEVND 8
LGE ND
Sbjct: 135 LGEAND 140
136|SequenceR|685|676|LSVAPFFLGE
>sp|US19_HCMVM|TRANSMEMBRANE protein US19|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 SVAPFFLG 9
+ APFFLG
Sbjct: 175 AAAPFFLG 182
>sp|US19_HCMVT|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 SVAPFFLG 9
+ APFFLG
Sbjct: 175 AAAPFFLG 182
>sp|US19_HCMVA|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SVAPFFLG 9
+ APFFLG
Sbjct: 175 AAAPFFLG 182
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 APFFLG 9
PFFLG
Sbjct: 70 GPFFLG 75
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 LSVAPFFLG 9
LSVA FLG
Sbjct: 2367 LSVALVFLG 2375
137|SequenceR|690|681|QVNRNLSVAP
***** No hits found ******
138|SequenceR|695|686|THLTVQVNRN
>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 HLTVQVNR 9
HL +QV+R
Sbjct: 284 HLDIQVDR 291
>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 HLTVQVNR 9
HL +QV+R
Sbjct: 284 HLDIQVDR 291
>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 HLTVQVNR 9
HL +QV+R
Sbjct: 284 HLDIQVDR 291
>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 LTVQVNRN 10
LTV+ +RN
Sbjct: 16 LTVETHRN 23
>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 LTVQVNRN 10
LTV+ +RN
Sbjct: 16 LTVETHRN 23
>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 LTVQVNRN 10
LTV+ +RN
Sbjct: 16 LTVETHRN 23
139|SequenceR|700|691|PVPLGTHLTV
>sp|SPI1_VARV|SERINE proteinase inhibitor 1|Variola virus
Query: 1 PVPLGTHLTV 10
P+P+ T +TV
Sbjct: 149 PLPINTRMTV 158
>sp|SPI1_VAR67|SERINE proteinase inhibitor 1|Variola virus (isolate
Query: 1 PVPLGTHLTV 10
P+P+ T +TV
Sbjct: 149 PLPINTRMTV 158
>sp|SPI1_CWPXB|SERINE proteinase inhibitor 1|Cowpox virus (strain Brighton Red)
Query: 1 PVPLGTHLTV 10
P+P+ T +TV
Sbjct: 132 PLPINTRMTV 141
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 PVPLGTHLTV 10
P+P G H+ +
Sbjct: 6810 PMPRGVHMNI 6819
>sp|UL32_HHV7J|PACKAGING protein UL32|Human herpesvirus 7 (strain JI)
Query: 2 VPLGTHLT 9
+PL TH T
Sbjct: 216 LPLNTHFT 223
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 VPLGTHLT 9
VP+ THLT
Sbjct: 268 VPIVTHLT 275
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 VPLGTHLT 9
VP+ THLT
Sbjct: 268 VPIVTHLT 275
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 3 PLGTHL 8
PL THL
Sbjct: 370 PLATHL 375
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PLGTHL 8
PL THL
Sbjct: 370 PLATHL 375
>sp|VP6_ROTHL|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 PLGTHLTV 10
P G H TV
Sbjct: 313 PFGHHATV 320
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 VPLGTH 7
VPL TH
Sbjct: 850 VPLSTH 855
140|SequenceR|710|696|AISARSSYFDPVPLG
>sp|PG089_MONPV|PUTATIVE nuclease OPG089|Monkeypox virus (MPXV)
Query: 5 RSSYFDPVPL 14
+SSY + VPL
Sbjct: 332 KSSYLESVPL 341
>sp|PG089_VARV|PUTATIVE nuclease OPG089|Variola virus
Query: 5 RSSYFDPVPL 14
+SSY + VPL
Sbjct: 332 KSSYLETVPL 341
>sp|PG089_VAR67|PUTATIVE nuclease OPG089|Variola virus (isolate Human/India/Ind3/1967)
Query: 5 RSSYFDPVPL 14
+SSY + VPL
Sbjct: 332 KSSYLETVPL 341
>sp|PG089_VACCC|PUTATIVE nuclease OPG089|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 RSSYFDPVPL 14
+SSY + VPL
Sbjct: 332 KSSYLETVPL 341
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 8 YFDPVPLG 15
Y PVPLG
Sbjct: 183 YLQPVPLG 190
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 8 YFDPVPLG 15
Y PVPLG
Sbjct: 183 YLQPVPLG 190
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 7 SYFDPVP 13
+YF+PVP
Sbjct: 190 TYFNPVP 196
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 9 FDPVPL 14
FDP+P+
Sbjct: 210 FDPIPI 215
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 9 FDPVPL 14
FDP+P+
Sbjct: 215 FDPIPI 220
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 9 FDPVPL 14
FDP+P+
Sbjct: 211 FDPIPI 216
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 9 FDPVPL 14
FDP+P+
Sbjct: 208 FDPIPI 213
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 9 FDPVPL 14
FDP+P+
Sbjct: 208 FDPIPI 213
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 2 ISARSSYFDPVPL 14
I+ YF P+P
Sbjct: 904 INVLKRYFKPIPF 916
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 5 RSSYFDP 11
RSSY DP
Sbjct: 1980 RSSYSDP 1986
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 5 RSSYFDP 11
RSSY DP
Sbjct: 1980 RSSYSDP 1986
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 5 RSSYFDP 11
RSSY DP
Sbjct: 1980 RSSYSDP 1986
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 5 RSSYFDP 11
RSSY DP
Sbjct: 1979 RSSYSDP 1985
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 10 DPVPLG 15
DPVP+G
Sbjct: 635 DPVPVG 640
>sp|NEC2_HHV11|NUCLEAR egress protein 2|Human herpesvirus 1 (strain 17)
Query: 4 ARSSYFDPVPL 14
AR F P+PL
Sbjct: 217 ARGDGFGPLPL 227
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 4 ARSSYFDPV 12
A S YF PV
Sbjct: 89 APSPYFSPV 97
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 AISARSSYFDPVP 13
AI S Y P+P
Sbjct: 1749 AIPCTSEYATPIP 1761
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 4 ARSSYFDPV 12
A S YF PV
Sbjct: 92 APSPYFSPV 100
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 1 AISARSSYFDPVPLG 15
A+ S PVPLG
Sbjct: 197 ALGEMSLKMSPVPLG 211
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 4 ARSSYFDPV 12
A S YF PV
Sbjct: 92 APSPYFSPV 100
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 4 ARSSYFDPV 12
A S YF PV
Sbjct: 91 APSPYFSPV 99
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 AISARSSYFDPVP 13
AI S Y P+P
Sbjct: 418 AIPCTSEYAKPIP 430
>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)
Query: 7 SYFDP 11
SYFDP
Sbjct: 355 SYFDP 359
>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)
Query: 7 SYFDP 11
SYFDP
Sbjct: 355 SYFDP 359
>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 7 SYFDP 11
SYFDP
Sbjct: 355 SYFDP 359
>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)
Query: 7 SYFDP 11
SYFDP
Sbjct: 355 SYFDP 359
>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 7 SYFDP 11
SYFDP
Sbjct: 355 SYFDP 359
>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)
Query: 7 SYFDP 11
SYFDP
Sbjct: 355 SYFDP 359
>sp|NCAP_MEASC|NUCLEOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 7 SYFDP 11
SYFDP
Sbjct: 355 SYFDP 359
>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)
Query: 7 SYFDP 11
SYFDP
Sbjct: 355 SYFDP 359
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 7 SYFDP 11
SYFDP
Sbjct: 355 SYFDP 359
>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 7 SYFDP 11
SYFDP
Sbjct: 355 SYFDP 359
>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)
Query: 7 SYFDP 11
SYFDP
Sbjct: 355 SYFDP 359
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 7 SYFDPVPL 14
+Y DP PL
Sbjct: 482 TYSDPFPL 489
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 7 SYFDPVPL 14
+Y DP PL
Sbjct: 482 TYSDPFPL 489
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 6 SSYFDPVPL 14
SSY+ P P+
Sbjct: 1193 SSYYYPEPI 1201
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 6 SSYFDPVPL 14
SSY+ P P+
Sbjct: 1189 SSYYYPEPI 1197
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 6 SSYFDPVPL 14
SSY+ P P+
Sbjct: 1189 SSYYYPEPI 1197
>sp|HEMA_CVHN5|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N5)
Query: 8 YFDPVPL 14
++DP+P+
Sbjct: 355 FYDPLPI 361
>sp|HEMA_CVHN2|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N2)
Query: 8 YFDPVPL 14
++DP+P+
Sbjct: 355 FYDPLPI 361
141|SequenceR|710|701|AISARSSYFD
***** No hits found ******
THE END