1|SequenceR|10|1|TALNTRSPMM
>sp|POLG_LIVSB|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/SB
Query: 2 ALNTRSPMM 10
LNTR+P M
Sbjct: 468 GLNTRNPTM 476
>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)
Query: 2 ALNTRSPMM 10
LNTR+P M
Sbjct: 468 GLNTRNPTM 476
>sp|POLG_LIVN1|GENOME polyprotein|Louping ill virus (strain Negishi
Query: 2 ALNTRSPMM 10
LNTR+P M
Sbjct: 468 GLNTRNPTM 476
>sp|POLG_LIVNO|GENOME polyprotein|Louping ill virus (isolate Sheep
Query: 2 ALNTRSPMM 10
LNTR+P M
Sbjct: 468 GLNTRNPTM 476
>sp|HE65_NPVAC|PROTEIN Early 65 kDa|Autographa californica nuclear polyhedrosis virus
Query: 2 ALNTRSPMM 10
ALN R P+M
Sbjct: 259 ALNERGPVM 267
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 ALNTRSPMM 10
LNTR+P M
Sbjct: 748 GLNTRNPTM 756
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 ALNTRSPMM 10
LNTR+P M
Sbjct: 748 GLNTRNPTM 756
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 TALNTRSP 8
TALNT++P
Sbjct: 1064 TALNTKAP 1071
2|SequenceR|15|6|SSPIGTALNT
>sp|RBP_BPLP2|RECEPTOR binding protein|Lactococcus phage p2 (Lactococcus lactis
Query: 1 SSPIGTALN 9
SSP+ TALN
Sbjct: 44 SSPLNTALN 52
>sp|RBP_BPLSK|RECEPTOR binding protein|Lactococcus phage SK1 (Lactococcus lactis
Query: 1 SSPIGTALN 9
SSP+ TALN
Sbjct: 44 SSPLNTALN 52
3|SequenceR|20|11|SYKVKSSPIG
>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)
Query: 2 YKVKSSPIG 10
YK+ S PIG
Sbjct: 6654 YKLHSEPIG 6662
>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)
Query: 2 YKVKSSPIG 10
YK+ S PIG
Sbjct: 6778 YKLYSEPIG 6786
>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus
Query: 2 YKVKSSPI 9
YK+KS+P+
Sbjct: 46 YKIKSNPL 53
>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 YKVKSSPI 9
YK+KS+P+
Sbjct: 46 YKIKSNPL 53
>sp|IBMP_FMVD|TRANSACTIVATOR/VIROPLASMIN protein|Figwort mosaic virus (strain DxS)
Query: 3 KVKSSPIG 10
KVKSSP+
Sbjct: 101 KVKSSPVA 108
>sp|PAP1_YMTV5|POLY(A) polymerase catalytic subunit|Yaba monkey tumor virus (strain
Query: 2 YKVKSSP 8
Y++KSSP
Sbjct: 56 YEIKSSP 62
4|SequenceR|25|16|TSSLRSYKVK
>sp|L_EBLV2|RNA-DIRECTED RNA polymerase L|European bat lyssavirus 2 (strain
Query: 2 SSLRSYKV 9
+SLRSYKV
Sbjct: 68 NSLRSYKV 75
5|SequenceR|30|21|IYGDDTSSLR
>sp|POL2_SQMVM|RNA2 polyprotein|Squash mosaic virus (strain melon)
Query: 4 DDTSSLR 10
DDTSSLR
Sbjct: 462 DDTSSLR 468
>sp|CEP2_PSHV1|CYTOPLASMIC envelopment protein 2|Psittacid herpesvirus 1 (isolate Amazon
Query: 3 GDDTSSLR 10
G DTSSLR
Sbjct: 60 GADTSSLR 67
>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)
Query: 1 IYGDDT 6
+YGDDT
Sbjct: 2804 VYGDDT 2809
>sp|POL1_RRVC|RNA1 polyprotein|Raspberry ringspot virus (strain cherry)
Query: 1 IYGDDTSSL 9
+YG DTS L
Sbjct: 2268 VYGTDTSIL 2276
>sp|VE2_BPV3|REGULATORY protein E2|Bovine papillomavirus type 3
Query: 1 IYGDDTSSL 9
IY DTSSL
Sbjct: 18 IYEQDTSSL 26
>sp|DPOL_RCMVM|DNA polymerase catalytic subunit|Rat cytomegalovirus (strain Maastricht)
Query: 1 IYGDDTSSLR 10
+YG+DT R
Sbjct: 1111 VYGEDTCGSR 1120
>sp|L_LBVAV|RNA-DIRECTED RNA polymerase L|Lettuce big-vein associated virus (isolate
Query: 1 IYGDDTSSL 9
+YG+DT ++
Sbjct: 1936 VYGEDTETI 1944
6|SequenceR|35|26|KFQLDIYGDD
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 2 FQLDIYGDD 10
F+LD+ GDD
Sbjct: 840 FELDVPGDD 848
>sp|POLG_LMVE|GENOME polyprotein|Lettuce mosaic virus (strain E)
Query: 1 KFQLDIYGDD 10
K +++YGDD
Sbjct: 2040 KMGIEVYGDD 2049
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 KFQLDIYGD 9
K Q D+YGD
Sbjct: 238 KMQNDVYGD 246
>sp|Y9K0_BPP22|UNCHARACTERIZED 9.0 kDa protein in|Salmonella phage P22 (Bacteriophage P22)
Query: 1 KFQLDIY 7
KFQL+IY
Sbjct: 12 KFQLEIY 18
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 1 KFQLDIYGD 9
K Q D+YGD
Sbjct: 238 KMQNDVYGD 246
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 FQLDIYGDD 10
F++D++GD+
Sbjct: 24 FRVDLFGDE 32
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 FQLDIYGDD 10
F++D++GD+
Sbjct: 24 FRVDLFGDE 32
>sp|POLG_LMV0|GENOME polyprotein|Lettuce mosaic virus (strain 0
Query: 1 KFQLDIYGDD 10
K +++YGDD
Sbjct: 2040 KVGIEVYGDD 2049
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 1 KFQLDIYGD 9
K Q D+YGD
Sbjct: 238 KMQNDVYGD 246
>sp|YHYA_BPH44|UNCHARACTERIZED 65 kDa protein in|Streptococcus pyogenes phage H4489A
Query: 3 QLDIYGDD 10
Q +IYGDD
Sbjct: 517 QAEIYGDD 524
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 1 KFQLDIYGD 9
K Q D+YGD
Sbjct: 236 KMQNDVYGD 244
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 1 KFQLDIYGD 9
K Q D+YGD
Sbjct: 265 KMQNDVYGD 273
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 1 KFQLDIYGD 9
K Q D+YGD
Sbjct: 236 KMQNDVYGD 244
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 3 QLDIYGD 9
QLD YGD
Sbjct: 410 QLDRYGD 416
>sp|VPHE_NPVOP|POLYHEDRAL envelope protein|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 1 KFQLDIYG 8
K+ +DIYG
Sbjct: 71 KYMVDIYG 78
>sp|VPHE_NPVAC|POLYHEDRAL envelope-associated phosphoprotein|Autographa californica nuclear
Query: 1 KFQLDIYG 8
K+ +DIYG
Sbjct: 60 KYMVDIYG 67
>sp|POLG_TUMVQ|GENOME polyprotein|Turnip mosaic virus (strain Quebec)
Query: 1 KFQLDIYGDD 10
K ++YGDD
Sbjct: 1942 KMGREVYGDD 1951
>sp|POLG_TUMVJ|GENOME polyprotein|Turnip mosaic virus (strain Japanese)
Query: 1 KFQLDIYGDD 10
K ++YGDD
Sbjct: 1943 KMGREVYGDD 1952
>sp|POLG_PRSVH|GENOME polyprotein|Papaya ringspot virus (strain P
Query: 1 KFQLDIYGDD 10
K ++YGDD
Sbjct: 2112 KLGREVYGDD 2121
>sp|Y01H_BPT4|UNCHARACTERIZED 8.1 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)
Query: 1 KFQLDIYGD 9
K DIYGD
Sbjct: 57 KLMRDIYGD 65
7|SequenceR|40|31|KPPTKKFQLD
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 KPPTKKFQLD 10
K PTKK+ LD
Sbjct: 2184 KTPTKKYLLD 2193
>sp|LTP_MHV68|LARGE tegument protein deneddylase|Murid herpesvirus 4 (MuHV-4) (Murine
Query: 1 KPPTKKFQL 9
+PPTKKF L
Sbjct: 1572 QPPTKKFGL 1580
>sp|NSP2_ROTHC|NON-STRUCTURAL protein 2|Rotavirus C (isolate RVC/Human/United
Query: 3 PTKKFQLD 10
PT+KFQ D
Sbjct: 93 PTEKFQFD 100
>sp|NS2A_CVMA5|NON-STRUCTURAL protein 2a|Murine coronavirus (strain A59) (MHV-A59)
Query: 1 KPPTKKF 7
KPPT KF
Sbjct: 191 KPPTPKF 197
>sp|NSP2_ROTPC|NON-STRUCTURAL protein 2|Rotavirus C (strain RVC/Pig/United States/Cowden/1980)
Query: 3 PTKKFQLD 10
PT+KFQ D
Sbjct: 93 PTEKFQFD 100
>sp|NS2A_CVRSD|NON-STRUCTURAL protein 2a|Rat coronavirus (strain 681) (RCV-SDAV)
Query: 1 KPPTKKF 7
KPPT KF
Sbjct: 195 KPPTPKF 201
>sp|NS2A_CVMJH|NON-STRUCTURAL protein 2a|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 1 KPPTKKF 7
KPPT KF
Sbjct: 195 KPPTPKF 201
>sp|REP_BCTVC|REPLICATION-ASSOCIATED protein|Beet curly top virus (strain
Query: 2 PPTKKFQL 9
PPTK+F++
Sbjct: 2 PPTKRFRI 9
>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain
Query: 1 KPPTKKFQLD 10
K P KK +LD
Sbjct: 1929 KDPVKKAELD 1938
>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain
Query: 1 KPPTKKFQLD 10
K P KK +LD
Sbjct: 1929 KDPVKKAELD 1938
>sp|CAPSD_CACV4|CAPSID protein VP1|Canine calicivirus (strain 48) (CaCV)
Query: 1 KPPTKK 6
KPPT+K
Sbjct: 361 KPPTRK 366
8|SequenceR|45|36|AKYPIKPPTK
>sp|Y091_OSHVF|UNCHARACTERIZED protein ORF91|Ostreid herpesvirus 1 (isolate France)
Query: 1 AKYPIKPP 8
A YP+ PP
Sbjct: 221 ASYPVIPP 228
>sp|TRM3_PSHV1|TRIPARTITE terminase subunit 3|Psittacid herpesvirus 1 (isolate Amazon
Query: 2 KYPIKPPTK 10
KY + PPT+
Sbjct: 11 KYGLSPPTR 19
>sp|POLG_PPVNA|GENOME polyprotein|Plum pox potyvirus (isolate NAT)
Query: 2 KYPIKP 7
+YPIKP
Sbjct: 3000 EYPIKP 3005
>sp|POLG_PPVSK|GENOME polyprotein|Plum pox potyvirus (strain SK
Query: 2 KYPIKP 7
+YPIKP
Sbjct: 3015 EYPIKP 3020
>sp|TATR_NPVBM|TRANS-ACTIVATING transcriptional regulatory protein|Bombyx mori nuclear polyhedrosis
Query: 2 KYPIKPPTK 10
K+P PP K
Sbjct: 405 KFPDNPPNK 413
>sp|POLG_PPVRA|GENOME polyprotein|Plum pox potyvirus (strain Rankovic)
Query: 2 KYPIKP 7
+YPIKP
Sbjct: 3015 EYPIKP 3020
>sp|POLG_PPVD|GENOME polyprotein|Plum pox potyvirus (strain D)
Query: 2 KYPIKP 7
+YPIKP
Sbjct: 3016 EYPIKP 3021
>sp|POLG_PPVEA|GENOME polyprotein|Plum pox potyvirus (strain El
Query: 2 KYPIKP 7
+YPIKP
Sbjct: 1393 EYPIKP 1398
>sp|CAPSD_CACV4|CAPSID protein VP1|Canine calicivirus (strain 48) (CaCV)
Query: 3 YPIKPPTK 10
YPI PP K
Sbjct: 107 YPILPPFK 114
9|SequenceR|50|41|TALAIAKYPI
>sp|LTP_PSHV1|LARGE tegument protein deneddylase|Psittacid herpesvirus 1 (isolate Amazon
Query: 2 ALAIAKYPI 10
+ AIAKYP+
Sbjct: 1719 SYAIAKYPV 1727
>sp|ENLYS_BPPZA|ENDOLYSIN phage PZA (Bacteriophage PZA)
Query: 1 TALAIAKYP 9
TALA A++P
Sbjct: 110 TALAAAEFP 118
>sp|ENLYS_BPPH2|ENDOLYSIN phage phi29 (Bacteriophage phi-29)
Query: 1 TALAIAKYP 9
TALA A++P
Sbjct: 110 TALAAAEFP 118
10|SequenceR|55|46|ILFLVTALAI
***** No hits found ******
11|SequenceR|60|51|ILFAGILFLV
>sp|RDRP_HASV|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Helicoverpa armigera stunt virus (HaSV)
Query: 1 ILFAGILFLV 10
I+F G+L++V
Sbjct: 1453 IVFIGLLYIV 1462
>sp|US27_HCMVA|G-PROTEIN coupled receptor homolog US27|Human cytomegalovirus (strain AD169)
Query: 2 LFAGILFLV 10
LFAG+ FL+
Sbjct: 114 LFAGVCFLI 122
>sp|US27_HCMVM|ENVELOPE glycoprotein US27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LFAGILFLV 10
LFAG+ FL+
Sbjct: 116 LFAGVCFLI 124
12|SequenceR|65|56|LSGIIILFAG
>sp|LONH_MIMIV|LON protease homolog|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 LSGIIILFA 9
LSG++I+F+
Sbjct: 625 LSGVLIVFS 633
>sp|YG35_BPLLH|UNCHARACTERIZED protein ORF5|Lactococcus phage LL-H (Lactococcus delbrueckii
Query: 2 SGIIILFAG 10
+G+I+++AG
Sbjct: 62 NGLIVMYAG 70
13|SequenceR|70|61|YGSLLLSGII
>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)
Query: 1 YGSLLLSGI 9
YGSL L+GI
Sbjct: 2310 YGSLSLTGI 2318
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 YGSLLLSGI 9
YG+L LSGI
Sbjct: 2319 YGNLSLSGI 2327
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 YGSLLLSGI 9
YG+L LSGI
Sbjct: 2318 YGNLSLSGI 2326
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 YGSLLLSGI 9
YG+L LSGI
Sbjct: 2319 YGNLSLSGI 2327
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 YGSLLLSGI 9
YG+L LSGI
Sbjct: 2318 YGNLSLSGI 2326
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 YGSLLLSGI 9
YG+L LSGI
Sbjct: 2318 YGNLSLSGI 2326
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 YGSLLLSGI 9
YG+L LSGI
Sbjct: 2319 YGNLSLSGI 2327
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 YGSLLLSGI 9
YG+L LSGI
Sbjct: 2318 YGNLSLSGI 2326
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 YGSLLLSGI 9
YG+L LSGI
Sbjct: 2318 YGNLSLSGI 2326
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 YGSLLLSGI 9
YG+L LSGI
Sbjct: 2318 YGNLSLSGI 2326
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 YGSLLLSG 8
YG++LLSG
Sbjct: 1643 YGNILLSG 1650
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 YGSLLLSG 8
YG++LLSG
Sbjct: 1629 YGNILLSG 1636
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 YGSLLLSG 8
YG++LLSG
Sbjct: 1636 YGNILLSG 1643
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 YGSLLLSG 8
YG++LLSG
Sbjct: 1636 YGNILLSG 1643
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 YGSLLLSG 8
YG++LLSG
Sbjct: 1632 YGNILLSG 1639
>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)
Query: 1 YGSLLLSGI 9
YGS+ L+GI
Sbjct: 3125 YGSMTLNGI 3133
>sp|POL1_BAYMY|GENOME polyprotein 1|Barley yellow mosaic virus (isolate
Query: 2 GSLLLSG 8
GSLLLSG
Sbjct: 163 GSLLLSG 169
>sp|POL1_BAYMJ|GENOME polyprotein 1|Barley yellow mosaic virus (strain
Query: 2 GSLLLSG 8
GSLLLSG
Sbjct: 163 GSLLLSG 169
>sp|POL1_BAYMG|GENOME polyprotein 1|Barley yellow mosaic virus (isolate
Query: 2 GSLLLSG 8
GSLLLSG
Sbjct: 163 GSLLLSG 169
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 YGSLLLSGII 10
YG LLL G++
Sbjct: 3664 YGMLLLVGMV 3673
>sp|R1A_BCHK9|REPLICASE polyprotein 1a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)
Query: 1 YGSLLLSGI 9
YGS+ L+GI
Sbjct: 3125 YGSMTLNGI 3133
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 YGSLLLSGII 10
YG LLL G++
Sbjct: 3664 YGMLLLVGMV 3673
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 YGSLLLSGI 9
YG++ LSGI
Sbjct: 2311 YGNISLSGI 2319
>sp|VF335_IIV6|UNCHARACTERIZED protein 335L|Invertebrate iridescent virus 6 (IIV-6)
Query: 2 GSLLLSGI 9
GS++LSGI
Sbjct: 300 GSVILSGI 307
>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)
Query: 1 YGSLLLSGII 10
YG LLL G++
Sbjct: 3664 YGMLLLIGMV 3673
>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)
Query: 1 YGSLLLSGII 10
YG LLL G++
Sbjct: 3664 YGMLLLIGMV 3673
>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)
Query: 1 YGSLLLSGII 10
YG LLL G++
Sbjct: 3664 YGMLLLIGMV 3673
>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)
Query: 1 YGSLLLSGII 10
YG LLL G++
Sbjct: 3664 YGMLLLIGMV 3673
>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)
Query: 1 YGSLLLSGII 10
YG LLL G++
Sbjct: 3664 YGMLLLIGMV 3673
>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)
Query: 1 YGSLLLSGII 10
YG LLL G++
Sbjct: 3664 YGMLLLIGMV 3673
>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)
Query: 1 YGSLLLSGII 10
YG LLL G++
Sbjct: 3664 YGMLLLIGMV 3673
>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)
Query: 1 YGSLLLSGII 10
YG LLL G++
Sbjct: 3664 YGMLLLIGMV 3673
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 YGSLLLSGI 9
YGS+ L+G+
Sbjct: 3356 YGSMTLNGL 3364
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 YGSLLLSGI 9
YGS+ L+G+
Sbjct: 3306 YGSMTLNGL 3314
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 YGSLLLSGI 9
YGS+ L+G+
Sbjct: 3326 YGSMTLNGL 3334
14|SequenceR|75|66|GGKSIYGSLL
>sp|VP1_POVLY|MAJOR capsid protein VP1|B-lymphotropic polyomavirus (LPV)
Query: 1 GGKSIYGS 8
GGK IYGS
Sbjct: 132 GGKYIYGS 139
>sp|UL92_EBVB9|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain B95-8)
Query: 3 KSIYGSLL 10
K++YG+LL
Sbjct: 190 KTVYGALL 197
>sp|UL92_EBVA8|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain AG876)
Query: 3 KSIYGSLL 10
K++YG+LL
Sbjct: 190 KTVYGALL 197
>sp|FIB12_BPT4|SHORT tail fiber protein gp12|Enterobacteria phage T4 (Bacteriophage T4)
Query: 1 GGKSIYGSL 9
GG+ IYG+L
Sbjct: 292 GGQIIYGTL 300
15|SequenceR|80|71|VARDAGGKSI
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 VARDAGGKSI 10
VARD GK +
Sbjct: 2792 VARDGAGKRV 2801
>sp|TOP2_ASFK5|DNA topoisomerase 2|African swine fever virus (isolate
Query: 2 ARDAGGK 8
AR+AGGK
Sbjct: 421 ARNAGGK 427
>sp|Y066_SIFVH|UNCHARACTERIZED protein 66|Sulfolobus islandicus filamentous virus (isolate
Query: 1 VARDAGGKSI 10
V RD+ GK+I
Sbjct: 109 VLRDSSGKNI 118
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 VARDAGGKSI 10
VAR+ GG+ +
Sbjct: 690 VARETGGRHV 699
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 VARDAGGKSI 10
VAR+ GG+ +
Sbjct: 690 VARETGGRHV 699
16|SequenceR|85|76|IILVPVARDA
>sp|RDRP_PAV|RNA-DIRECTED RNA polymerase|Pariacoto virus (PaV)
Query: 3 LVPVARD 9
LVPVARD
Sbjct: 89 LVPVARD 95
>sp|VF439_IIV3|PROBABLE kinase 098L|Invertebrate iridescent virus 3 (IIV-3)
Query: 1 IILVPVAR 8
IILVPV R
Sbjct: 211 IILVPVER 218
17|SequenceR|90|81|FVLIGIILVP
>sp|VP1_SSV1|STRUCTURAL protein VP1|Sulfolobus spindle-shape virus 1 (SSV1)
Query: 1 FVLIGIILVP 10
F+LIGI+L+P
Sbjct: 85 FILIGIVLLP 94
>sp|EV162_ASFM2|PUTATIVE membrane protein 162|African swine fever virus (isolate
Query: 2 VLIGIILV 9
VLIGIILV
Sbjct: 8 VLIGIILV 15
>sp|CCPH_SHV21|COMPLEMENT control protein homolog|Saimiriine herpesvirus 2 (strain 11)
Query: 1 FVLIGIIL 8
F++IGIIL
Sbjct: 338 FIIIGIIL 345
18|SequenceR|95|86|YFGPLFVLIG
>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)
Query: 2 FGPLFVLIG 10
F PLFVLIG
Sbjct: 2411 FYPLFVLIG 2419
>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)
Query: 2 FGPLFVLIG 10
F PLFVLIG
Sbjct: 2411 FYPLFVLIG 2419
>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 2 FGPLFVLIG 10
F PLFVL+G
Sbjct: 2414 FYPLFVLVG 2422
>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 2 FGPLFVLIG 10
F PLFVL+G
Sbjct: 2414 FYPLFVLVG 2422
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 YFGPLFVLIG 10
+F PLF LIG
Sbjct: 2411 WFYPLFCLIG 2420
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 YFGPLFVLIG 10
+F PLF LIG
Sbjct: 2361 WFYPLFCLIG 2370
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 YFGPLFVLIG 10
+F PLF LIG
Sbjct: 2381 WFYPLFCLIG 2390
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 YFGPLFVLIG 10
+F PLF LIG
Sbjct: 2411 WFYPLFCLIG 2420
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 YFGPLFVLIG 10
+F PLF LIG
Sbjct: 2361 WFYPLFCLIG 2370
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 YFGPLFVLIG 10
+F PLF LIG
Sbjct: 2381 WFYPLFCLIG 2390
>sp|HEMA_HUTV|HEMAGGLUTININ-ESTERASE torovirus (HuTV)
Query: 1 YFGPLFV 7
YFGPL++
Sbjct: 21 YFGPLYI 27
>sp|NSP_TGMVY|NUCLEAR shuttle protein|Tomato golden mosaic virus (strain
Query: 2 FGPLFVLI 9
FGP FV++
Sbjct: 61 FGPEFVMV 68
>sp|YR618_MIMIV|UNCHARACTERIZED protein R618|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 YFGPLFVLI 9
Y GPL +LI
Sbjct: 525 YIGPLDILI 533
>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)
Query: 2 FGPLFVLIG 10
F PLF LIG
Sbjct: 2357 FYPLFGLIG 2365
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 FGPLFVL 8
FGPL++L
Sbjct: 896 FGPLWIL 902
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 FGPLFVL 8
FGPL++L
Sbjct: 896 FGPLWIL 902
>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)
Query: 2 FGPLFVLIG 10
F PLF LIG
Sbjct: 2357 FYPLFGLIG 2365
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 FGPLFVLIG 10
FG F+L+G
Sbjct: 664 FGSSFILVG 672
>sp|POLG_PRSVH|GENOME polyprotein|Papaya ringspot virus (strain P
Query: 1 YFGPLFVLIG 10
YFG FV+ G
Sbjct: 514 YFGDYFVVRG 523
>sp|MVP_PRSVH|P3N-PIPO polyprotein|Papaya ringspot virus (strain P
Query: 1 YFGPLFVLIG 10
YFG FV+ G
Sbjct: 514 YFGDYFVVRG 523
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 FGPLFVLIG 10
FG F+L+G
Sbjct: 664 FGTSFILVG 672
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 FGPLFVLIG 10
FG F+L+G
Sbjct: 666 FGDSFILVG 674
19|SequenceR|100|91|AIRLHYFGPL
>sp|GP_SBVBH|ENVELOPMENT polyprotein|Bovine Schmallenberg virus (isolate
Query: 2 IRLHYFGPL 10
+ +HYF PL
Sbjct: 907 LTMHYFKPL 915
>sp|L_SENDZ|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Z) (SeV)
Query: 1 AIRLHYFG 8
AIR+ YFG
Sbjct: 1209 AIRIPYFG 1216
>sp|L_SENDO|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Ohita) (SeV)
Query: 1 AIRLHYFG 8
AIR+ YFG
Sbjct: 1209 AIRIPYFG 1216
>sp|L_SENDF|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Fushimi) (SeV)
Query: 1 AIRLHYFG 8
AIR+ YFG
Sbjct: 1209 AIRIPYFG 1216
>sp|L_SENDE|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Enders) (SeV)
Query: 1 AIRLHYFG 8
AIR+ YFG
Sbjct: 1209 AIRIPYFG 1216
>sp|L_SENDA|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Hamamatsu) (SeV)
Query: 1 AIRLHYFG 8
AIR+ YFG
Sbjct: 1209 AIRIPYFG 1216
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 AIRLHYFGP 9
+RLH F P
Sbjct: 2127 GVRLHRFAP 2135
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 AIRLHYFGP 9
+RLH F P
Sbjct: 2129 GVRLHRFAP 2137
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 AIRLHYFGP 9
+RLH F P
Sbjct: 2127 GVRLHRFAP 2135
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 AIRLHYFGP 9
+RLH F P
Sbjct: 2127 GVRLHRFAP 2135
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 AIRLHYFGP 9
+RLH F P
Sbjct: 2125 GVRLHRFAP 2133
>sp|VGLN_BEFVB|NON-STRUCTURAL glycoprotein GNS|Bovine ephemeral fever virus (strain
Query: 1 AIRLHYFG 8
A RLHY G
Sbjct: 240 ACRLHYCG 247
>sp|DPOL_GSHV|PROTEIN P|Ground squirrel hepatitis virus (strain
Query: 5 HYFGPL 10
+YFGPL
Sbjct: 99 NYFGPL 104
>sp|VG11_EHV2|UNCHARACTERIZED gene 11 protein|Equine herpesvirus 2 (strain 86/87)
Query: 1 AIRLHYFGP 9
+ +HY+GP
Sbjct: 331 TVPIHYYGP 339
20|SequenceR|105|96|KSAYYAIRLH
>sp|POL_SOCMV|ENZYMATIC polyprotein|Soybean chlorotic mottle virus
Query: 1 KSAYYAIRLH 10
KS YY +RLH
Sbjct: 299 KSGYYQLRLH 308
>sp|POL_CYLCV|ENZYMATIC polyprotein|Cestrum yellow leaf curling virus
Query: 1 KSAYYAIRLH 10
KS Y+ +RLH
Sbjct: 298 KSGYWQLRLH 307
>sp|RDRP_TRVPP|REPLICASE large subunit|Tobacco rattle virus (isolate PpK20)
Query: 1 KSAYYAIRLH 10
K A YAI LH
Sbjct: 214 KGAQYAIALH 223
>sp|194K_TRVSY|REPLICASE large subunit|Tobacco rattle virus (strain SYM)
Query: 1 KSAYYAIRLH 10
K A YAI LH
Sbjct: 214 KGAQYAIALH 223
>sp|MCE_RGDV|PUTATIVE mRNA-capping enzyme P5|Rice gall dwarf virus (RGDV)
Query: 2 SAYYAIRLH 10
S YYA+R H
Sbjct: 642 STYYALRGH 650
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 4 YYAIRLH 10
YY+ RLH
Sbjct: 1130 YYSARLH 1136
>sp|RDRP_CPMV1|RNA-DIRECTED RNA polymerase|Cryphonectria parasitica mitovirus 1 (strain
Query: 1 KSAYYAIRLH 10
++A+Y++ LH
Sbjct: 351 QTAFYSLHLH 360
21|SequenceR|110|101|YGRYGKSAYY
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 YGRYGKSAYY 10
YG++GK Y
Sbjct: 433 YGQFGKKTKY 442
>sp|GE_CHV9D|ENVELOPE glycoprotein E|Cercopithecine herpesvirus 9 (strain DHV)
Query: 4 YGKSAYY 10
YG+S YY
Sbjct: 562 YGQSTYY 568
>sp|H_BPCHP|MINOR spike protein H|Chlamydia phage 1 (Bacteriophage Chp1)
Query: 1 YGRYGKSAYY 10
YG++G+ AY+
Sbjct: 185 YGKFGEVAYW 194
>sp|BP48_BPT4|BASEPLATE tail-tube junction protein gp48|Enterobacteria phage T4
Query: 1 YGRYGKSAY 9
YG GKS Y
Sbjct: 234 YGETGKSQY 242
22|SequenceR|120|106|DDFDPIDDYSYGRYG
>sp|SPIKE_ADE08|FIBER protein|Human adenovirus D serotype 8
Query: 1 DDFDPIDDYSYGR 13
DDF+P+ Y Y R
Sbjct: 9 DDFNPVYPYGYAR 21
>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 2 DFDPIDDYSYGRYG 15
DF PID Y G+ G
Sbjct: 196 DFTPIDQYMCGKNG 209
>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 2 DFDPIDDYSYGRYG 15
DF PID Y G+ G
Sbjct: 196 DFTPIDQYMCGKNG 209
>sp|SPIKE_ADE15|FIBER protein|Human adenovirus D serotype 15
Query: 1 DDFDPIDDYSYGR 13
DDF+P+ Y Y R
Sbjct: 9 DDFNPVYPYGYAR 21
>sp|SPIKE_ADE1H|FIBER protein|Human adenovirus D serotype 15/H9
Query: 1 DDFDPIDDYSYGR 13
DDF+P+ Y Y R
Sbjct: 9 DDFNPVYPYGYAR 21
>sp|SPIKE_ADE09|FIBER protein|Human adenovirus D serotype 9
Query: 1 DDFDPIDDYSYGR 13
DDF+P+ Y Y R
Sbjct: 9 DDFNPVYPYGYAR 21
>sp|PG190_VACCC|PROTEIN OPG190|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DDFDPIDD 8
++FDP+DD
Sbjct: 242 EEFDPVDD 249
>sp|PG190_VACCW|PROTEIN OPG190|Vaccinia virus (strain Western Reserve)
Query: 1 DDFDPIDD 8
++FDP+DD
Sbjct: 242 EEFDPVDD 249
>sp|PG190_VACCT|PROTEIN OPG190|Vaccinia virus (strain Tian Tan)
Query: 1 DDFDPIDD 8
++FDP+DD
Sbjct: 242 EEFDPVDD 249
>sp|PG190_MONPV|PROTEIN OPG190|Monkeypox virus (MPXV)
Query: 1 DDFDPIDD 8
++FDP+DD
Sbjct: 242 EEFDPVDD 249
>sp|VP2_BTV10|OUTER capsid protein VP2|Bluetongue virus 10 (isolate USA)
Query: 1 DDFDPIDDYSYGR 13
DDF + DY+ GR
Sbjct: 594 DDFSTLTDYTKGR 606
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 DDFDPIDD 8
DD+DPI+D
Sbjct: 1694 DDWDPIED 1701
>sp|PG190_VACCA|PROTEIN OPG190|Vaccinia virus (strain Ankara) (VACV)
Query: 1 DDFDPIDD 8
+ FDP+DD
Sbjct: 242 EKFDPVDD 249
>sp|LYS_BPB30|D-ALANYL-L-ALANINE endopeptidase|Streptococcus phage B30 (Streptococcus agalactiae
Query: 4 DPIDDYSYGRYG 15
DPI Y +GR+G
Sbjct: 202 DPIGYYHFGRFG 213
>sp|CAPSD_AHV2H|CAPSID protein|Atkinsonella hypoxylon virus (isolate 2H)
Query: 3 FDPIDDYSYGRYG 15
FDP DD S Y
Sbjct: 464 FDPYDDESSAHYA 476
>sp|V001_FOWPN|PUTATIVE C-type lectin protein FPV001/FPV260|Fowlpox virus (strain NVSL)
Query: 3 FDPIDDYSYG 12
FDP+++ +YG
Sbjct: 153 FDPVNECAYG 162
>sp|PG190_VACC0|PROTEIN OPG190|Vaccinia virus (strain LC16m0) (VACV)
Query: 1 DDFDPIDD 8
+ FDP+DD
Sbjct: 242 EKFDPVDD 249
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 1 DDFDPIDDYSYGRY 14
DDF+P+ Y Y Y
Sbjct: 8 DDFNPV--YPYEHY 19
>sp|PG190_VACCL|PROTEIN OPG190|Vaccinia virus (strain Lister) (VACV)
Query: 1 DDFDPIDD 8
+ FDP+DD
Sbjct: 242 EKFDPVDD 249
>sp|MCP_LCDV1|MAJOR capsid protein|Lymphocystis disease virus 1 (isolate
Query: 2 DFDPIDDYSYGR 13
D DP+ +YGR
Sbjct: 390 DMDPMGSTNYGR 401
>sp|Y023_NPVOP|UNCHARACTERIZED 73.1 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 2 DFDPIDD 8
DF PIDD
Sbjct: 22 DFTPIDD 28
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 1 DDFDPIDDYSYGRY 14
DDF+P+ Y Y Y
Sbjct: 8 DDFNPV--YPYEHY 19
>sp|GT041_SIFVH|PUTATIVE glycosyltransferase 41|Sulfolobus islandicus filamentous virus
Query: 3 FDPIDDYSY 11
DPID+Y+Y
Sbjct: 262 IDPIDEYTY 270
>sp|RPOLV_BPN4|VIRION DNA-directed RNA polymerase|Enterobacteria phage N4 (Bacteriophage
Query: 1 DDFDPIDDY 9
D FDPI+ +
Sbjct: 1276 DSFDPINSF 1284
>sp|DARA_BPP1|DEFENSE against restriction protein A|Escherichia phage P1 (Bacteriophage
Query: 1 DDFDPIDDYSYGRYG 15
D+ DP Y Y RYG
Sbjct: 439 DEGDPY--YEYARYG 451
>sp|RDRP_PLRV1|PROTEIN P1-P2|Potato leafroll virus (strain Potato/Scotland/strain
Query: 1 DDFDPIDDYSYGR 13
DD+D +DY R
Sbjct: 440 DDYDSDEDYGLER 452
>sp|P1_PLRV1|PROTEIN P1|Potato leafroll virus (strain Potato/Scotland/strain
Query: 1 DDFDPIDDYSYGR 13
DD+D +DY R
Sbjct: 440 DDYDSDEDYGLER 452
>sp|MCP_IRV9|MAJOR capsid protein|Wiseana iridescent virus (WIV) (Insect
Query: 3 FDPIDDYSYG 12
FD I+ Y YG
Sbjct: 18 FDEIEKYMYG 27
Query: 2 DFDPIDDYSYGR 13
D DP+ +YG+
Sbjct: 393 DLDPMGSTNYGK 404
>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 6 IDDYSYGRY 14
I+DY Y RY
Sbjct: 4389 INDYDYYRY 4397
>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 6 IDDYSYGRY 14
I+DY Y RY
Sbjct: 4387 INDYDYYRY 4395
>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 6 IDDYSYGRY 14
I+DY Y RY
Sbjct: 4387 INDYDYYRY 4395
>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote
Query: 1 DDFDPIDDYS 10
+DF+ +DDY+
Sbjct: 761 NDFNKLDDYN 770
>sp|126R_IIV3|UNCHARACTERIZED protein 126R|Invertebrate iridescent virus 3 (IIV-3)
Query: 1 DDFDPID 7
D FDP+D
Sbjct: 30 DPFDPVD 36
>sp|VF205_IIV3|PUTATIVE DNA ligase 052L|Invertebrate iridescent virus 3 (IIV-3)
Query: 7 DDYSYGRY 14
DDY++G Y
Sbjct: 582 DDYNFGSY 589
>sp|MCP_IRV22|MAJOR capsid protein|Simulium iridescent virus (IIV-22) (Insect
Query: 3 FDPIDDYSYG 12
FD I+ Y YG
Sbjct: 18 FDEIEKYMYG 27
Query: 2 DFDPIDDYSYGR 13
D DP+ +YG+
Sbjct: 393 DLDPMGSTNYGK 404
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 DFDPIDDYS 10
DF PID+ S
Sbjct: 545 DFSPIDNES 553
>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus
Query: 2 DFDPIDDYS 10
DF PID+ S
Sbjct: 545 DFSPIDNES 553
>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 DFDPIDDYS 10
DF PID+ S
Sbjct: 545 DFSPIDNES 553
>sp|MCP_IRV16|MAJOR capsid protein|Costelytra zealandica iridescent virus (CzIV)
Query: 3 FDPIDDYSYG 12
FD I+ Y YG
Sbjct: 18 FDEIEKYMYG 27
Query: 2 DFDPIDDYSYGR 13
D DP+ +YG+
Sbjct: 393 DLDPMGSTNYGK 404
>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)
Query: 2 DFDPIDDYS 10
DF PID+ S
Sbjct: 545 DFSPIDNES 553
>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)
Query: 2 DFDPIDDYS 10
DF PID+ S
Sbjct: 545 DFSPIDNES 553
>sp|L_TSWV1|RNA-DIRECTED RNA polymerase L|Tomato spotted wilt virus (strain
Query: 4 DPIDDYS 10
DP DDYS
Sbjct: 636 DPNDDYS 642
>sp|NTP1_VACCW|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Western Reserve)
Query: 2 DFDPIDDYS 10
DF PID+ S
Sbjct: 545 DFSPIDNES 553
>sp|NEF_HV2RO|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 DFDPIDDYSY 11
+FDP+ YSY
Sbjct: 214 EFDPLLAYSY 223
>sp|MCP_IRV1|MAJOR capsid protein|Tipula iridescent virus (TIV) (Insect
Query: 3 FDPIDDYSYG 12
FD I+ Y YG
Sbjct: 18 FDEIEKYMYG 27
Query: 2 DFDPIDDYSYGR 13
D DP+ +YG+
Sbjct: 393 DLDPMGSTNYGK 404
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 DDFDPIDDYSY 11
D FDP+ + Y
Sbjct: 523 DSFDPVAELRY 533
>sp|L_NDVB1|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Chicken/United
Query: 1 DDFDPIDDYSY 11
+DFDP + Y
Sbjct: 514 NDFDPYKEMEY 524
>sp|L_NDVB|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Beaudette
Query: 1 DDFDPIDDYSY 11
+DFDP + Y
Sbjct: 514 NDFDPYKEMEY 524
>sp|LT_POVLY|LARGE T antigen|B-lymphotropic polyomavirus (LPV)
Query: 3 FDPIDDYSYG 12
FD +DD+ +G
Sbjct: 434 FDEMDDFLHG 443
>sp|RP147_FOWPN|DNA-DIRECTED RNA polymerase 147 kDa|Fowlpox virus (strain NVSL) (FPV)
Query: 2 DFDPIDDYSYGR 13
D +PID YGR
Sbjct: 690 DGEPIDTKIYGR 701
>sp|POLG_VESVA|GENOME polyprotein|Vesicular exanthema of swine virus
Query: 3 FDPIDDYSYGRYG 15
FD +D ++YG G
Sbjct: 1694 FDSMDLFTYGDDG 1706
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 4 DPIDDYSY 11
D +DD+SY
Sbjct: 743 DTLDDFSY 750
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 DPIDDY 9
DPI+DY
Sbjct: 152 DPIEDY 157
>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like
Query: 4 DPIDDY 9
DPI+DY
Sbjct: 152 DPIEDY 157
>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 4 DPIDDY 9
DPI+DY
Sbjct: 152 DPIEDY 157
>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 4 DPIDDY 9
DPI+DY
Sbjct: 152 DPIEDY 157
>sp|287R_IIV6|UNCHARACTERIZED protein 287R|Invertebrate iridescent virus 6 (IIV-6)
Query: 1 DDFDPIDDYSYGR 13
++ P+D Y Y R
Sbjct: 215 NELTPLDQYIYAR 227
>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 6 IDDYSYGRY 14
I DY Y RY
Sbjct: 4813 ISDYDYYRY 4821
Query: 4 DPIDDY 9
DPI+DY
Sbjct: 152 DPIEDY 157
>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like
Query: 6 IDDYSYGRY 14
I DY Y RY
Sbjct: 4817 ISDYDYYRY 4825
Query: 4 DPIDDY 9
DPI+DY
Sbjct: 152 DPIEDY 157
>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 6 IDDYSYGRY 14
I DY Y RY
Sbjct: 4825 ISDYDYYRY 4833
Query: 4 DPIDDY 9
DPI+DY
Sbjct: 152 DPIEDY 157
>sp|TRP_BPMU|PROBABLE tail terminator protein|Escherichia phage Mu (Bacteriophage Mu)
Query: 2 DFDPIDDY 9
D D +DDY
Sbjct: 143 DLDSLDDY 150
>sp|SPIK2_ADE41|FIBER protein 2|Human adenovirus F serotype 41
Query: 1 DDFDPIDDY 9
DDF+P+ Y
Sbjct: 8 DDFNPVYPY 16
>sp|SPIK2_ADE40|FIBER protein 2|Human adenovirus F serotype 40
Query: 1 DDFDPIDDY 9
DDF+P+ Y
Sbjct: 8 DDFNPVYPY 16
>sp|POLG_SMSV1|GENOME polyprotein|San Miguel sea lion virus
Query: 3 FDPIDDYSYGRYG 15
FD +D ++YG G
Sbjct: 1692 FDSMDLFTYGDDG 1704
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 6 IDDYSYGRY 14
I DY Y RY
Sbjct: 4819 ISDYDYYRY 4827
Query: 4 DPIDDY 9
DPI+DY
Sbjct: 152 DPIEDY 157
>sp|NEF_HV2D1|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 FDPIDDYSY 11
FDP+ YSY
Sbjct: 215 FDPMLAYSY 223
>sp|MATRX_ISFV|MATRIX protein|Isfahan virus (ISFV)
Query: 2 DFDPIDDYSYGRYG 15
D+D YS RYG
Sbjct: 24 DWDEPPSYSDSRYG 37
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 6 IDDYSYGRY 14
I DY Y RY
Sbjct: 4842 ISDYDYYRY 4850
>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 DPIDDYS 10
DPIDD+S
Sbjct: 127 DPIDDFS 133
>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)
Query: 6 IDDYSYGRY 14
I DY Y RY
Sbjct: 4683 ISDYDYYRY 4691
>sp|SPIKE_ADEP3|FIBER protein|Porcine adenovirus A serotype 3
Query: 1 DDFDPIDDY 9
+DFDP+ Y
Sbjct: 12 EDFDPVYPY 20
>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)
Query: 4 DPIDDYS 10
DPIDD+S
Sbjct: 130 DPIDDFS 136
>sp|YL074_MIMIV|UNCHARACTERIZED protein L74|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 DDFDPIDDYSYGRY 14
DD PI DY G++
Sbjct: 36 DDTSPIFDYETGKH 49
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 6 IDDYSYGRY 14
+DD ++GRY
Sbjct: 425 MDDIAHGRY 433
>sp|POLG_TMEVB|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain
Query: 2 DFDPIDDYSYG 12
DFD I SYG
Sbjct: 2164 DFDDIKVLSYG 2174
>sp|POLG_SMSV4|GENOME polyprotein|San Miguel sea lion virus
Query: 3 FDPIDDYSYGRYG 15
FD +D ++YG G
Sbjct: 1027 FDSMDLFTYGDDG 1039
>sp|NEF_SIVML|PROTEIN Nef|Simian immunodeficiency virus (isolate K78)
Query: 3 FDPIDDYSYGRY 14
FDP Y+Y Y
Sbjct: 215 FDPTPAYTYEAY 226
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 6 IDDYSYGRY 14
+DD ++GRY
Sbjct: 425 MDDIAHGRY 433
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 6 IDDYSYGRY 14
+DD ++GRY
Sbjct: 425 MDDIAHGRY 433
>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 6 IDDYSYGRY 14
+DD ++GRY
Sbjct: 425 MDDIAHGRY 433
>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 6 IDDYSYGRY 14
+DD ++GRY
Sbjct: 425 MDDIAHGRY 433
>sp|RDRP_ROTPY|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Pig/Mexico/YM/1983/G11P9[7])
Query: 6 IDDYSYGRY 14
+DD ++GRY
Sbjct: 425 MDDIAHGRY 433
>sp|P3_RGDV|OUTER capsid protein P3|Rice gall dwarf virus (RGDV)
Query: 2 DFDPIDDYSYG 12
D D +D+ YG
Sbjct: 378 DLDAFNDFIYG 388
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 4 DPIDDYSY 11
DP DYS+
Sbjct: 438 DPFSDYSF 445
>sp|MCP_IIV3|MAJOR capsid protein|Invertebrate iridescent virus 3 (IIV-3)
Query: 2 DFDPIDDYSYGR 13
D DP+ +YG+
Sbjct: 398 DLDPMGSTNYGK 409
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 6 IDDYSYGRY 14
+DD ++GRY
Sbjct: 425 MDDIAHGRY 433
>sp|LTP_ALHV1|LARGE tegument protein deneddylase|Alcelaphine herpesvirus 1 (strain
Query: 4 DPIDDYSYGRYG 15
+P+++Y YG
Sbjct: 210 EPVNEYLLANYG 221
23|SequenceR|120|111|DDFDPIDDYS
>sp|PG190_VACCC|PROTEIN OPG190|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DDFDPIDD 8
++FDP+DD
Sbjct: 242 EEFDPVDD 249
>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 2 DFDPIDDY 9
DF PID Y
Sbjct: 196 DFTPIDQY 203
>sp|PG190_VACCW|PROTEIN OPG190|Vaccinia virus (strain Western Reserve)
Query: 1 DDFDPIDD 8
++FDP+DD
Sbjct: 242 EEFDPVDD 249
>sp|PG190_VACCT|PROTEIN OPG190|Vaccinia virus (strain Tian Tan)
Query: 1 DDFDPIDD 8
++FDP+DD
Sbjct: 242 EEFDPVDD 249
>sp|PG190_MONPV|PROTEIN OPG190|Monkeypox virus (MPXV)
Query: 1 DDFDPIDD 8
++FDP+DD
Sbjct: 242 EEFDPVDD 249
>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Query: 2 DFDPIDDY 9
DF PID Y
Sbjct: 196 DFTPIDQY 203
>sp|RPOLV_BPN4|VIRION DNA-directed RNA polymerase|Enterobacteria phage N4 (Bacteriophage
Query: 1 DDFDPIDDY 9
D FDPI+ +
Sbjct: 1276 DSFDPINSF 1284
>sp|PG190_VACCA|PROTEIN OPG190|Vaccinia virus (strain Ankara) (VACV)
Query: 1 DDFDPIDD 8
+ FDP+DD
Sbjct: 242 EKFDPVDD 249
>sp|Y023_NPVOP|UNCHARACTERIZED 73.1 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 2 DFDPIDD 8
DF PIDD
Sbjct: 22 DFTPIDD 28
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 DPIDDY 9
DPI+DY
Sbjct: 152 DPIEDY 157
>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like
Query: 4 DPIDDY 9
DPI+DY
Sbjct: 152 DPIEDY 157
>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 4 DPIDDY 9
DPI+DY
Sbjct: 152 DPIEDY 157
>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 4 DPIDDY 9
DPI+DY
Sbjct: 152 DPIEDY 157
>sp|SPIK2_ADE41|FIBER protein 2|Human adenovirus F serotype 41
Query: 1 DDFDPIDDY 9
DDF+P+ Y
Sbjct: 8 DDFNPVYPY 16
>sp|SPIK2_ADE40|FIBER protein 2|Human adenovirus F serotype 40
Query: 1 DDFDPIDDY 9
DDF+P+ Y
Sbjct: 8 DDFNPVYPY 16
>sp|PG190_VACC0|PROTEIN OPG190|Vaccinia virus (strain LC16m0) (VACV)
Query: 1 DDFDPIDD 8
+ FDP+DD
Sbjct: 242 EKFDPVDD 249
>sp|PG190_VACCL|PROTEIN OPG190|Vaccinia virus (strain Lister) (VACV)
Query: 1 DDFDPIDD 8
+ FDP+DD
Sbjct: 242 EKFDPVDD 249
>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote
Query: 1 DDFDPIDDYS 10
+DF+ +DDY+
Sbjct: 761 NDFNKLDDYN 770
>sp|VG26_ICHVA|UNCHARACTERIZED protein ORF26|Ictalurid herpesvirus 1 (strain Auburn)
Query: 3 FDPIDDYS 10
FDP++D S
Sbjct: 68 FDPVNDSS 75
>sp|RDRP_PLRV1|PROTEIN P1-P2|Potato leafroll virus (strain Potato/Scotland/strain
Query: 1 DDFDPIDDY 9
DD+D +DY
Sbjct: 440 DDYDSDEDY 448
>sp|P1_PLRV1|PROTEIN P1|Potato leafroll virus (strain Potato/Scotland/strain
Query: 1 DDFDPIDDY 9
DD+D +DY
Sbjct: 440 DDYDSDEDY 448
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 1 DDFDPIDDY 9
DDF+P+ Y
Sbjct: 8 DDFNPVYPY 16
>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 4 DPIDDY 9
DPI+DY
Sbjct: 152 DPIEDY 157
>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 4 DPIDDY 9
DPI+DY
Sbjct: 152 DPIEDY 157
>sp|TRP_BPMU|PROBABLE tail terminator protein|Escherichia phage Mu (Bacteriophage Mu)
Query: 2 DFDPIDDY 9
D D +DDY
Sbjct: 143 DLDSLDDY 150
>sp|SPIKE_ADEP3|FIBER protein|Porcine adenovirus A serotype 3
Query: 1 DDFDPIDDY 9
+DFDP+ Y
Sbjct: 12 EDFDPVYPY 20
>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004)
Query: 4 DPIDDY 9
DPI+DY
Sbjct: 152 DPIEDY 157
>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus
Query: 2 DFDPIDDYS 10
DF PID+ S
Sbjct: 545 DFSPIDNES 553
>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 DFDPIDDYS 10
DF PID+ S
Sbjct: 545 DFSPIDNES 553
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 DFDPIDDYS 10
DF PID+ S
Sbjct: 545 DFSPIDNES 553
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 DPIDDY 9
DPI+DY
Sbjct: 152 DPIEDY 157
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 DDFDPIDD 8
D FDP+ D
Sbjct: 2258 DSFDPVVD 2265
>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)
Query: 2 DFDPIDDYS 10
DF PID+ S
Sbjct: 545 DFSPIDNES 553
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 1 DDFDPIDDY 9
DDF+P+ Y
Sbjct: 8 DDFNPVYPY 16
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 DDFDPIDD 8
DD+DPI+D
Sbjct: 1694 DDWDPIED 1701
>sp|NTP1_VACCW|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Western Reserve)
Query: 2 DFDPIDDYS 10
DF PID+ S
Sbjct: 545 DFSPIDNES 553
>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)
Query: 2 DFDPIDDYS 10
DF PID+ S
Sbjct: 545 DFSPIDNES 553
>sp|SPIKE_ADE08|FIBER protein|Human adenovirus D serotype 8
Query: 1 DDFDPIDDY 9
DDF+P+ Y
Sbjct: 9 DDFNPVYPY 17
>sp|L_TSWV1|RNA-DIRECTED RNA polymerase L|Tomato spotted wilt virus (strain
Query: 4 DPIDDYS 10
DP DDYS
Sbjct: 636 DPNDDYS 642
>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)
Query: 1 DDFDPIDD 8
DDF +DD
Sbjct: 997 DDFKAVDD 1004
>sp|P14_ASFM2|STRUCTURAL protein p14.5|African swine fever virus (isolate
Query: 1 DDFDPIDDY 9
++F+PI DY
Sbjct: 42 EEFEPIPDY 50
>sp|TEG1_EHV1V|TEGUMENT protein UL46 homolog|Equine herpesvirus 1 (strain V592)
Query: 4 DPIDDYS 10
DP+ DYS
Sbjct: 578 DPMSDYS 584
>sp|TEG1_EHV1B|TEGUMENT protein UL46 homolog|Equine herpesvirus 1 (strain Ab4p)
Query: 4 DPIDDYS 10
DP+ DYS
Sbjct: 578 DPMSDYS 584
>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)
Query: 1 DDFDPIDD 8
DDF +DD
Sbjct: 997 DDFKAVDD 1004
>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 DPIDDYS 10
DPIDD+S
Sbjct: 127 DPIDDFS 133
>sp|NTP1_RFVKA|NUCLEOSIDE triphosphatase I|Rabbit fibroma virus (strain Kasza)
Query: 2 DFDPIDDYS 10
+F P+DD S
Sbjct: 545 NFSPVDDES 553
>sp|NTP1_MYXVL|NUCLEOSIDE triphosphatase I|Myxoma virus (strain Lausanne) (MYXV)
Query: 2 DFDPIDDYS 10
DF P+D+ S
Sbjct: 545 DFSPVDNES 553
>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)
Query: 4 DPIDDYS 10
DPIDD+S
Sbjct: 130 DPIDDFS 136
THE END