1|SequenceR|10|1|AQEPTRPQSM
>sp|GE_HHV2H|ENVELOPE glycoprotein E|Human herpesvirus 2 (strain HG52)
Query: 3 EPTRPQ 8
EPTRP
Sbjct: 394 EPTRPH 399
>sp|NEC2_HCMVM|NUCLEAR egress protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PTRPQS 9
P+RPQS
Sbjct: 351 PSRPQS 356
>sp|NEC2_HCMVA|NUCLEAR egress protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PTRPQS 9
P+RPQS
Sbjct: 350 PSRPQS 355
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 QEPTRPQ 8
+ PTRPQ
Sbjct: 1041 RAPTRPQ 1047
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 QEPTRPQ 8
+ PTRPQ
Sbjct: 1041 RAPTRPQ 1047
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 QEPTRPQS 9
Q P RP+S
Sbjct: 107 QPPCRPRS 114
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 QEPTRPQS 9
Q P RP+S
Sbjct: 107 QPPCRPRS 114
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 3 EPTRPQSM 10
+PT+PQ +
Sbjct: 799 KPTKPQKI 806
2|SequenceR|15|6|GPTDLAQEPT
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 PTDLAQEPT 10
P+DL+QE T
Sbjct: 1722 PSDLSQERT 1730
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 1 GPTDLAQEPT 10
G TD+ ++PT
Sbjct: 124 GGTDMTRDPT 133
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 TDLAQEPT 10
TD+A++PT
Sbjct: 6534 TDIAKKPT 6541
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 TDLAQEPT 10
TD+A++PT
Sbjct: 6557 TDIAKKPT 6564
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 GPTDLAQEPT 10
GP DL+ PT
Sbjct: 662 GPPDLSSLPT 671
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 GPTDLAQEPT 10
GP DL+ PT
Sbjct: 662 GPPDLSSLPT 671
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 GPTDLAQEPT 10
GP DL+ PT
Sbjct: 662 GPPDLSSLPT 671
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 2 PTDLAQE 8
P+DLA+E
Sbjct: 313 PSDLAEE 319
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 GPTDLAQE 8
GP DLA E
Sbjct: 331 GPEDLAVE 338
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 GPTDLAQE 8
GP DLA++
Sbjct: 400 GPEDLARD 407
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 GPTDLAQE 8
GP DLA++
Sbjct: 399 GPEDLARD 406
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 GPTDLAQE 8
GP LA+E
Sbjct: 358 GPATLAEE 365
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 GPTDLAQE 8
GP LA+E
Sbjct: 358 GPATLAEE 365
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 GPTDLAQE 8
GP LA+E
Sbjct: 358 GPATLAEE 365
3|SequenceR|20|11|GPPCDGPTDL
>sp|E3145_ADE05|EARLY E3 14.5 kDa protein|Human adenovirus C serotype 5
Query: 3 PCDGPTDL 10
PC GP DL
Sbjct: 104 PCQGPEDL 111
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 PPCDGPTDL 10
PP GPTD+
Sbjct: 1827 PPATGPTDV 1835
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 1 GPPCDGP 7
GPP DGP
Sbjct: 19 GPPSDGP 25
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 3 PCDGPTDL 10
PC P+DL
Sbjct: 789 PCGAPSDL 796
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 GPPCDG 6
GPP DG
Sbjct: 1954 GPPSDG 1959
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 GPPCDG 6
GPP DG
Sbjct: 1954 GPPSDG 1959
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 GPPCDGPTD 9
GPP DG +
Sbjct: 127 GPPVDGAVE 135
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GPPCDGPTD 9
GPP DG +
Sbjct: 127 GPPVDGAVE 135
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 5 DGPTDL 10
DGP DL
Sbjct: 1822 DGPVDL 1827
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 GPPCDGPTDL 10
G P D P DL
Sbjct: 871 GQPLDAPEDL 880
>sp|E321_ADE35|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 35
Query: 3 PCDGP 7
PCD P
Sbjct: 55 PCDQP 59
>sp|UL24_HHV8P|PROTEIN UL24 homolog|Human herpesvirus 8 type P
Query: 1 GPPCDGP 7
GP C GP
Sbjct: 251 GPACSGP 257
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 3 PCDGPTDL 10
PC PT L
Sbjct: 2075 PCTEPTPL 2082
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 5 DGPTDL 10
DGP DL
Sbjct: 1821 DGPLDL 1826
>sp|BVLF1_EBVB9|LATE gene expression regulator BVLF1|Epstein-Barr virus (strain B95-8)
Query: 2 PPCD 5
PPCD
Sbjct: 243 PPCD 246
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 1 GPPCDGPT 8
G PC PT
Sbjct: 563 GDPCKQPT 570
>sp|VE7_HPV42|PROTEIN E7|Human papillomavirus 42
Query: 2 PPCDGPTDL 10
P C+ P DL
Sbjct: 17 PTCETPIDL 25
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 GPPCDGPTDL 10
PP GP D+
Sbjct: 622 APPSTGPRDM 631
Query: 1 GPPCDGPTDL 10
PP GP D+
Sbjct: 632 APPSTGPRDM 641
Query: 1 GPPCDGPTDL 10
PP GP D+
Sbjct: 642 APPSTGPRDM 651
>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain
Query: 3 PCDGP 7
PC GP
Sbjct: 349 PCSGP 353
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 3 PCDGP 7
PC GP
Sbjct: 349 PCSGP 353
>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain
Query: 3 PCDGP 7
PC GP
Sbjct: 349 PCSGP 353
>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain
Query: 3 PCDGP 7
PC GP
Sbjct: 349 PCSGP 353
>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)
Query: 3 PCDGP 7
PC GP
Sbjct: 349 PCSGP 353
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 2 PPCDGPTDL 10
PP +G TD+
Sbjct: 133 PPPNGHTDV 141
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 GPPCDGPTD 9
P CDG D
Sbjct: 2371 APSCDGELD 2379
>sp|E321_ADE07|EARLY E3 20.5 kDa glycoprotein|Human adenovirus B serotype 7
Query: 3 PCDGP 7
PCD P
Sbjct: 54 PCDQP 58
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CDGP 7
CDGP
Sbjct: 45 CDGP 48
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CDGP 7
CDGP
Sbjct: 45 CDGP 48
>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GPPCDGP 7
G PC+ P
Sbjct: 426 GGPCESP 432
>sp|REV_HV2RO|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 2 PPCDGPTD 9
PP D P D
Sbjct: 63 PPADSPLD 70
>sp|E321_ADE1P|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 11
Query: 3 PCDGP 7
PCD P
Sbjct: 55 PCDQP 59
>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P
Query: 1 GPPCDGPT 8
G PCD P+
Sbjct: 33 GAPCDEPS 40
>sp|E321_ADE1A|EARLY E3 20.2 kDa glycoprotein|Human adenovirus B serotype 11
Query: 3 PCDGP 7
PCD P
Sbjct: 55 PCDQP 59
>sp|E321_ADE03|EARLY E3 20.5 kDa glycoprotein|Human adenovirus B serotype 3
Query: 3 PCDGP 7
PCD P
Sbjct: 54 PCDQP 58
>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GPPCDGP 7
G PC+ P
Sbjct: 426 GGPCESP 432
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 DGPTDL 10
DGPT L
Sbjct: 157 DGPTSL 162
>sp|REV_HV2NZ|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 2 PPCDGPTD 9
PP D P D
Sbjct: 63 PPADSPLD 70
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 3 PCDGP 7
PCD P
Sbjct: 272 PCDAP 276
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 DGPTDL 10
DGPT L
Sbjct: 157 DGPTSL 162
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 DGPTDL 10
DGPT L
Sbjct: 157 DGPTSL 162
>sp|REV_HV2D1|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 2 PPCDGPTD 9
PP D P D
Sbjct: 63 PPTDSPLD 70
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 DGPTDL 10
DGPT L
Sbjct: 157 DGPTSL 162
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 PPCDGPTDL 10
P GPTD+
Sbjct: 1825 PLATGPTDV 1833
4|SequenceR|25|16|DEDRRGPPCD
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 1 DEDRRGPP 8
D DRR PP
Sbjct: 770 DVDRRAPP 777
>sp|C_MEASY|PROTEIN C|Measles virus (strain Yamagata-1) (MeV)
Query: 2 EDRRGPP 8
+DR GPP
Sbjct: 36 QDRSGPP 42
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DEDRRGPPCD 10
D DR GP D
Sbjct: 728 DRDRSGPLVD 737
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DEDRRGPPCD 10
D DR GP D
Sbjct: 746 DRDRSGPLVD 755
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DEDRRGP 7
DE+RRGP
Sbjct: 667 DEERRGP 673
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DEDRRGP 7
DE+RRGP
Sbjct: 667 DEERRGP 673
>sp|UL87_HHV7J|PROTEIN U58|Human herpesvirus 7 (strain JI)
Query: 5 RGPPCD 10
RGP CD
Sbjct: 496 RGPYCD 501
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 5 RGPPCD 10
RGP CD
Sbjct: 505 RGPYCD 510
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 RGPPCD 10
RGP CD
Sbjct: 505 RGPYCD 510
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DEDRRGP 7
D DR GP
Sbjct: 738 DRDRSGP 744
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 DEDRRGPPC 9
D+DR GPP
Sbjct: 2 DKDRPGPPA 10
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 5 RGPPC 9
RGPPC
Sbjct: 2434 RGPPC 2438
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 6 GPPCD 10
GPPC+
Sbjct: 566 GPPCN 570
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 6 GPPCD 10
GPPC+
Sbjct: 566 GPPCN 570
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 6 GPPCD 10
GPPC+
Sbjct: 566 GPPCN 570
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 6 GPPCD 10
GPPC+
Sbjct: 566 GPPCN 570
>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate
Query: 1 DEDRRGP 7
DE+ RGP
Sbjct: 186 DENPRGP 192
>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain
Query: 1 DEDRRGP 7
DE+ RGP
Sbjct: 186 DENPRGP 192
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 6 GPPCD 10
GPPC+
Sbjct: 566 GPPCN 570
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 6 GPPCD 10
GPPC+
Sbjct: 566 GPPCN 570
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 6 GPPCD 10
GPPC+
Sbjct: 566 GPPCN 570
>sp|MATRX_MEASU|MATRIX protein|Measles virus (strain Hu2) (MeV)
Query: 1 DEDRRGPP 8
D D GPP
Sbjct: 61 DSDSLGPP 68
>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)
Query: 3 DRRGPPCD 10
+RRGPP
Sbjct: 105 ERRGPPLS 112
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 2 EDRRGP 7
+DR+GP
Sbjct: 669 KDRKGP 674
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 2 EDRRGP 7
+DR+GP
Sbjct: 669 KDRKGP 674
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 2 EDRRGP 7
+DR+GP
Sbjct: 669 KDRKGP 674
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 2 EDRRGP 7
+DR+GP
Sbjct: 668 KDRKGP 673
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 2 EDRRGP 7
+DR+GP
Sbjct: 669 KDRKGP 674
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 6 GPPC 9
GPPC
Sbjct: 269 GPPC 272
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 6 GPPC 9
GPPC
Sbjct: 266 GPPC 269
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 6 GPPC 9
GPPC
Sbjct: 250 GPPC 253
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 6 GPPC 9
GPPC
Sbjct: 266 GPPC 269
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|HBZ_HTL1A|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 4 RRGPPCD 10
RRGPP +
Sbjct: 62 RRGPPGE 68
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 6 GPPC 9
GPPC
Sbjct: 273 GPPC 276
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 DRRGPP 8
DRRG P
Sbjct: 520 DRRGNP 525
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 DRRGPP 8
DRRG P
Sbjct: 521 DRRGNP 526
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 DRRGPP 8
DRRG P
Sbjct: 522 DRRGVP 527
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 3 DRRGPPCD 10
D GPP D
Sbjct: 380 DIEGPPTD 387
>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)
Query: 3 DRRGPPCD 10
D GPP D
Sbjct: 380 DIEGPPTD 387
>sp|MATRX_MEASE|MATRIX protein|Measles virus (strain Edmonston) (MeV)
Query: 1 DEDRRGPP 8
D D GPP
Sbjct: 61 DSDPLGPP 68
>sp|MATRX_MEASC|MATRIX protein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 DEDRRGPP 8
D D GPP
Sbjct: 61 DSDPLGPP 68
>sp|HBZ_HTL1C|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 4 RRGPP 8
RRGPP
Sbjct: 62 RRGPP 66
>sp|MATRX_MEASA|MATRIX protein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 DEDRRGPP 8
D D GPP
Sbjct: 61 DSDPLGPP 68
>sp|MATRX_MEASH|MATRIX protein|Measles virus (strain Halle) (MeV)
Query: 1 DEDRRGPP 8
D D GPP
Sbjct: 61 DSDPLGPP 68
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 DRRGPP 8
DRRG P
Sbjct: 521 DRRGVP 526
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 5 RGPPCD 10
RGPP D
Sbjct: 97 RGPPAD 102
>sp|MATRX_MEASI|MATRIX protein|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 DEDRRGPP 8
D D GPP
Sbjct: 61 DSDPLGPP 68
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 DRRGPP 8
DRRG P
Sbjct: 522 DRRGVP 527
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EDRRGP 7
+DR+GP
Sbjct: 484 DDRQGP 489
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 2 EDRRGPPC 9
+ RRGP C
Sbjct: 542 KARRGPGC 549
>sp|TAT_HV1U4|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 4 RRGPP 8
RRGPP
Sbjct: 55 RRGPP 59
5|SequenceR|30|21|IGEGADEDRR
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 IGEGADEDRR 10
+ +G DEDRR
Sbjct: 2338 LDDGQDEDRR 2347
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 EGADEDRR 10
+GA+ED R
Sbjct: 2769 QGAEEDER 2776
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 EGADEDR 9
+G DEDR
Sbjct: 2757 DGVDEDR 2763
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 EGADEDR 9
+G DEDR
Sbjct: 2757 DGVDEDR 2763
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 EGADEDR 9
EG D DR
Sbjct: 747 EGGDRDR 753
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 GADEDR 9
G DEDR
Sbjct: 107 GGDEDR 112
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 GADEDR 9
G DEDR
Sbjct: 107 GGDEDR 112
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 IGEGADEDRR 10
IG G DE R
Sbjct: 1521 IGRGGDEALR 1530
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 IGEGADEDRR 10
IG G DE R
Sbjct: 1517 IGRGGDEALR 1526
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 3 EGADEDRR 10
EG +DRR
Sbjct: 138 EGTSDDRR 145
>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)
Query: 4 GADEDR 9
GAD DR
Sbjct: 69 GADNDR 74
>sp|IL1BP_MONPV|INTERLEUKIN-1-BINDING protein|Monkeypox virus (MPXV)
Query: 4 GADEDR 9
GAD DR
Sbjct: 69 GADNDR 74
>sp|IL1BP_CWPXB|INTERLEUKIN-1-BINDING protein|Cowpox virus (strain Brighton Red)
Query: 4 GADEDR 9
GAD DR
Sbjct: 69 GADNDR 74
>sp|SPIKE_ADE04|FIBER protein|Human adenovirus E serotype 4
Query: 1 IGEGADED 8
+GEG D D
Sbjct: 66 LGEGVDLD 73
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 IGEGADE 7
IG G DE
Sbjct: 1519 IGRGGDE 1525
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 2 GEGADE 7
GEG DE
Sbjct: 184 GEGEDE 189
6|SequenceR|35|26|RQSCQIGEGA
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 2 QSCQIG 7
QSCQ+G
Sbjct: 393 QSCQMG 398
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 RQSCQIGE 8
RQS ++GE
Sbjct: 2163 RQSIELGE 2170
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 RQSCQIGE 8
RQS ++GE
Sbjct: 2163 RQSIELGE 2170
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 RQSCQIGE 8
RQS ++GE
Sbjct: 2163 RQSIELGE 2170
>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus
Query: 2 QSCQIGEG 9
Q C++G+G
Sbjct: 150 QICRVGKG 157
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 1 RQSCQIGEG 9
RQS +IG G
Sbjct: 303 RQSIRIGPG 311
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 3 SCQIGE 8
+C+IGE
Sbjct: 1692 ACEIGE 1697
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 5 QIGEGA 10
QIG+GA
Sbjct: 1122 QIGDGA 1127
>sp|UNG_VARV|URACIL-DNA glycosylase|Variola virus
Query: 3 SCQIGE 8
SC++GE
Sbjct: 124 SCKLGE 129
>sp|UNG_VAR67|URACIL-DNA glycosylase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 SCQIGE 8
SC++GE
Sbjct: 124 SCKLGE 129
>sp|UNG_VACCC|URACIL-DNA glycosylase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 SCQIGE 8
SC++GE
Sbjct: 124 SCKLGE 129
>sp|UNG_VACCA|URACIL-DNA glycosylase|Vaccinia virus (strain Ankara) (VACV)
Query: 3 SCQIGE 8
SC++GE
Sbjct: 124 SCKLGE 129
>sp|UNG_MONPV|URACIL-DNA glycosylase|Monkeypox virus (MPXV)
Query: 3 SCQIGE 8
SC++GE
Sbjct: 124 SCKLGE 129
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 CQIGEGA 10
C I EGA
Sbjct: 327 CMIDEGA 333
7|SequenceR|40|31|SFSLMRQSCQ
>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 SLMRQSCQ 10
SLM+ SC+
Sbjct: 310 SLMQDSCK 317
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 SLMRQSCQ 10
SLM+ SC+
Sbjct: 310 SLMQDSCK 317
>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 SLMRQSCQ 10
SLM+ SC+
Sbjct: 310 SLMQDSCK 317
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 4 LMRQSCQ 10
L+RQ CQ
Sbjct: 223 LLRQQCQ 229
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 LMRQSC 9
LMR SC
Sbjct: 1408 LMRSSC 1413
8|SequenceR|45|36|SLLADSFSLM
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 LLADSFSLM 10
++ +SFS+M
Sbjct: 1533 IMTESFSIM 1541
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 LLADSFSLM 10
++ +SFS+M
Sbjct: 1534 IMTESFSIM 1542
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 SLLADSFSLM 10
+LLAD F ++
Sbjct: 6245 ALLADKFPVL 6254
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 SLLADSFSLM 10
+LLAD F ++
Sbjct: 6222 ALLADKFPVL 6231
>sp|PG029_VACCC|IFN signaling evasion protein OPG029|Vaccinia virus (strain
Query: 4 ADSFSL 9
ADSFSL
Sbjct: 7 ADSFSL 12
9|SequenceR|50|41|VTAIISLLAD
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 VTAIISLLAD 10
VT + S+L+D
Sbjct: 2169 VTVLTSMLSD 2178
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 VTAIISLLAD 10
VT + S+L+D
Sbjct: 2169 VTVLTSMLSD 2178
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 VTAIISLL 8
VTAI+S L
Sbjct: 860 VTAIVSTL 867
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 VTAIISLL 8
VTAI+S L
Sbjct: 860 VTAIVSTL 867
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 VTAIISLL 8
VTAI+S L
Sbjct: 851 VTAIVSTL 858
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 VTAIISLL 8
VTAI+S L
Sbjct: 851 VTAIVSTL 858
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 VTAIISLLAD 10
VTAI LAD
Sbjct: 571 VTAIEKYLAD 580
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 VTAIISLL 8
VTAI+S L
Sbjct: 849 VTAIVSTL 856
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 VTAIISLL 8
VTAI+S L
Sbjct: 849 VTAIVSTL 856
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 VTAIISLL 8
VTAI+S L
Sbjct: 849 VTAIVSTL 856
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 VTAIISLL 8
VTAI+S L
Sbjct: 854 VTAIVSTL 861
10|SequenceR|55|46|VPLIMVTAII
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 PLIMVTAII 10
PL ++ AII
Sbjct: 2375 PLTLIVAII 2383
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 PLIMVTAII 10
PL ++ AII
Sbjct: 2375 PLTLIVAII 2383
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 PLIMVTAII 10
PL ++ AII
Sbjct: 2371 PLTLIVAII 2379
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 2 PLIMVTAII 10
PL+ +TA I
Sbjct: 620 PLMWITAFI 628
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 2 PLIMVTAII 10
PL+ +TA I
Sbjct: 620 PLMWITAFI 628
11|SequenceR|60|51|IETHTVPLIM
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 IETHTVP 7
IETHTVP
Sbjct: 1477 IETHTVP 1483
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 IETHTVPL 8
I+TH VPL
Sbjct: 548 IKTHFVPL 555
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 IETHTVPL 8
I+TH VPL
Sbjct: 549 IKTHFVPL 556
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 IETHTVPLIM 10
+ET T PLI+
Sbjct: 3781 VETLTWPLIL 3790
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 IETHTVPLIM 10
+ET T PLI+
Sbjct: 3781 VETLTWPLIL 3790
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 IETHTVP 7
IET TVP
Sbjct: 1480 IETRTVP 1486
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 THTVPLI 9
TH VPL+
Sbjct: 5739 THIVPLL 5745
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 IETHTVPL 8
+E H +PL
Sbjct: 1941 VERHVIPL 1948
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 IETHTVP 7
IET TVP
Sbjct: 1472 IETSTVP 1478
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 IETHTVP 7
IET TVP
Sbjct: 1472 IETSTVP 1478
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 IETHTVPL 8
I+TH VP+
Sbjct: 559 IKTHFVPM 566
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 IETHTVPL 8
I+TH VP+
Sbjct: 559 IKTHFVPM 566
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 IETHTVPL 8
I+TH VP+
Sbjct: 559 IKTHFVPM 566
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 IETHTVPL 8
I+TH VP+
Sbjct: 559 IKTHFVPM 566
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 1 IETHTVPLI 9
+E H+ PL+
Sbjct: 381 MEVHSCPLL 389
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 IETHTVPL 8
I+TH VP+
Sbjct: 559 IKTHFVPM 566
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 IETHTVP 7
IET TVP
Sbjct: 1473 IETTTVP 1479
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 IETHTVP 7
IET TVP
Sbjct: 1473 IETTTVP 1479
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 IETHTVP 7
IET TVP
Sbjct: 1473 IETTTVP 1479
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 IETHTVP 7
IET TVP
Sbjct: 1472 IETTTVP 1478
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 IETHTVP 7
IET TVP
Sbjct: 1470 IETTTVP 1476
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 IETHTVP 7
IET TVP
Sbjct: 1472 IETTTVP 1478
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 IETHTVP 7
IET TVP
Sbjct: 1472 IETTTVP 1478
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 IETHTVP 7
IET TVP
Sbjct: 1476 IETTTVP 1482
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 IETHTVP 7
IET TVP
Sbjct: 1472 IETTTVP 1478
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 IETHTVP 7
IET TVP
Sbjct: 1472 IETTTVP 1478
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 IETHTVP 7
IET TVP
Sbjct: 1477 IETTTVP 1483
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 IETHTVP 7
IET TVP
Sbjct: 1476 IETTTVP 1482
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 1 IETHTVPL 8
IET+T P+
Sbjct: 79 IETYTFPV 86
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 IETHTVP 7
IET TVP
Sbjct: 1477 IETTTVP 1483
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IETHTVPL 8
IET+T P+
Sbjct: 79 IETYTFPV 86
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 1 IETHTVPL 8
IET+T P+
Sbjct: 79 IETYTFPV 86
>sp|IR01_HCMVM|PROTEIN RL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 THTVPL 8
THT PL
Sbjct: 9 THTTPL 14
>sp|IR01_HCMVA|UNCHARACTERIZED protein HKLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 THTVPL 8
THT PL
Sbjct: 9 THTTPL 14
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 IETHTVP 7
+E H+VP
Sbjct: 302 VELHSVP 308
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 3 THTVPL 8
+HTVP+
Sbjct: 66 SHTVPI 71
12|SequenceR|65|56|QQEPSIETHT
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 4 PSIETHT 10
PSI+THT
Sbjct: 528 PSIDTHT 534
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 QEPSIETHT 10
EP + THT
Sbjct: 168 HEPRVVTHT 176
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 5 SIETHT 10
SIETHT
Sbjct: 1476 SIETHT 1481
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 4 PSIETHT 10
PSIE HT
Sbjct: 221 PSIEIHT 227
>sp|PG091_VARV|PROTEIN OPG091|Variola virus
Query: 4 PSIETH 9
PSIE H
Sbjct: 31 PSIEKH 36
>sp|PG091_VAR67|PROTEIN OPG091|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 PSIETH 9
PSIE H
Sbjct: 31 PSIEKH 36
>sp|PG091_VACCC|PROTEIN OPG091|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 PSIETH 9
PSIE H
Sbjct: 31 PSIEKH 36
>sp|PG091_MONPV|PROTEIN OPG091|Monkeypox virus (MPXV)
Query: 4 PSIETH 9
PSIE H
Sbjct: 31 PSIEKH 36
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 4 PSIETHT 10
PSIE HT
Sbjct: 221 PSIEIHT 227
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 4 PSIETHT 10
PSIE HT
Sbjct: 221 PSIEIHT 227
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 2 QEPSIETH 9
+EP +E H
Sbjct: 579 REPVVENH 586
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 4 PSIETHT 10
PSIE HT
Sbjct: 222 PSIEIHT 228
>sp|UL92_HHV6U|PROTEIN U63|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 EPSIET 8
EP+IET
Sbjct: 99 EPNIET 104
>sp|UL92_HHV6Z|PROTEIN U63|Human herpesvirus 6B (strain Z29)
Query: 3 EPSIET 8
EP+IET
Sbjct: 101 EPNIET 106
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 4 PSIETHT 10
PSIE HT
Sbjct: 220 PSIEIHT 226
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 4 PSIETHT 10
PSIE HT
Sbjct: 221 PSIEIHT 227
>sp|VU55_HHV6U|UNCHARACTERIZED protein U55|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 QQEPSIETHT 10
Q PS+E H+
Sbjct: 417 QTLPSVEKHS 426
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 3 EPSIETHT 10
EPS+ HT
Sbjct: 257 EPSVSGHT 264
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 3 EPSIETHT 10
EPS+ HT
Sbjct: 257 EPSVSGHT 264
>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)
Query: 4 PSIETHT 10
PS+E HT
Sbjct: 223 PSVEIHT 229
>sp|VL2_HPV52|MINOR capsid protein L2|Human papillomavirus 52
Query: 2 QEPSIETHT 10
P+I THT
Sbjct: 184 SSPTISTHT 192
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 4 PSIETHT 10
PS+E HT
Sbjct: 221 PSVEIHT 227
13|SequenceR|70|61|VSRDFQQEPS
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 4 DFQQEPS 10
DF+QEP+
Sbjct: 946 DFRQEPT 952
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 4 DFQQEPS 10
DF+QEP+
Sbjct: 946 DFRQEPT 952
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 4 DFQQEPS 10
DF+QEP+
Sbjct: 946 DFRQEPT 952
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 4 DFQQEPS 10
DF+QEP+
Sbjct: 946 DFRQEPT 952
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 3 RDFQQEPS 10
+DF Q+PS
Sbjct: 44 QDFSQDPS 51
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 RDFQQEPS 10
+DF Q+PS
Sbjct: 44 QDFSQDPS 51
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 RDFQQEPS 10
+DF Q+PS
Sbjct: 44 QDFSQDPS 51
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 RDFQQEPS 10
+DF Q+PS
Sbjct: 44 QDFSQDPS 51
>sp|TRX2_HHV7M|TRIPLEX capsid protein 2|Human herpesvirus 7 (strain MUK)
Query: 3 RDFQQEPS 10
++F QEPS
Sbjct: 234 KNFSQEPS 241
>sp|TRX2_HHV7J|TRIPLEX capsid protein 2|Human herpesvirus 7 (strain JI)
Query: 3 RDFQQEPS 10
++F QEPS
Sbjct: 234 KNFSQEPS 241
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 RDFQQEPS 10
+DF Q+PS
Sbjct: 44 QDFTQDPS 51
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 RDFQQEPS 10
+DF Q+PS
Sbjct: 44 QDFTQDPS 51
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 RDFQQEPS 10
+DF Q+PS
Sbjct: 44 QDFAQDPS 51
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 RDFQQEPS 10
+DF Q+PS
Sbjct: 44 QDFAQDPS 51
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 RDFQQEPS 10
+DF Q+PS
Sbjct: 44 QDFTQDPS 51
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 RDFQQEPS 10
+DF Q+PS
Sbjct: 44 QDFTQDPS 51
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 RDFQQEPS 10
+DF Q+PS
Sbjct: 44 QDFTQDPS 51
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 RDFQQEPS 10
+DF Q+PS
Sbjct: 44 QDFTQDPS 51
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 4 DFQQEPS 10
DF Q+PS
Sbjct: 45 DFSQDPS 51
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 RDFQQEPS 10
+DF Q+PS
Sbjct: 44 QDFTQDPS 51
>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus
Query: 2 SRDFQQEP 9
+RD QQ P
Sbjct: 349 TRDTQQHP 356
>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 SRDFQQEP 9
+RD QQ P
Sbjct: 349 TRDTQQHP 356
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 4 DFQQEPS 10
DF Q+PS
Sbjct: 45 DFSQDPS 51
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 3 RDFQQEPS 10
+DF Q+PS
Sbjct: 44 QDFSQDPS 51
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 4 DFQQEPS 10
DF Q+PS
Sbjct: 45 DFSQDPS 51
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 4 DFQQEPS 10
DF Q+PS
Sbjct: 45 DFSQDPS 51
>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)
Query: 2 SRDFQQEP 9
+RD QQ P
Sbjct: 349 TRDTQQHP 356
>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SRDFQQEP 9
+RD QQ P
Sbjct: 349 TRDTQQHP 356
>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)
Query: 2 SRDFQQEP 9
+RD QQ P
Sbjct: 349 TRDTQQHP 356
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 4 DFQQEPS 10
DF Q+PS
Sbjct: 45 DFSQDPS 51
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 FQQEP 9
FQQEP
Sbjct: 483 FQQEP 487
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 FQQEP 9
FQQEP
Sbjct: 483 FQQEP 487
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 RDFQQEPS 10
+DF Q+PS
Sbjct: 44 QDFTQDPS 51
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 VSRDFQ 6
VSRDF+
Sbjct: 1506 VSRDFK 1511
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 RDFQQEP 9
+DF Q+P
Sbjct: 44 QDFSQDP 50
14|SequenceR|75|66|ALLRQVSRDF
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ALLRQVSRDF 10
AL RQV RDF
Sbjct: 32 ALYRQVLRDF 41
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ALLRQVSRDF 10
AL RQV RDF
Sbjct: 32 ALYRQVLRDF 41
>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)
Query: 2 LLRQVSRDF 10
+LRQ S DF
Sbjct: 208 ILRQQSADF 216
>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LLRQVSRDF 10
+LRQ S DF
Sbjct: 208 ILRQQSADF 216
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 2 LLRQVSRDF 10
+LRQ S DF
Sbjct: 208 ILRQQSADF 216
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 2 LLRQVSRDF 10
+LRQ S DF
Sbjct: 208 ILRQQSADF 216
>sp|VE6_HPV41|PROTEIN E6|Human papillomavirus type 41
Query: 1 ALLRQVSRDF 10
ALL+ V +D+
Sbjct: 120 ALLQSVEKDY 129
>sp|VE4_HPV63|PROTEIN E4|Human papillomavirus type 63
Query: 2 LLRQVSRDF 10
L R+V++DF
Sbjct: 98 LQREVNQDF 106
15|SequenceR|80|71|VAIRTALLRQ
***** No hits found ******
16|SequenceR|85|76|FTMLYVAIRT
>sp|VPAP_HCMVM|DNA polymerase processivity factor|Human cytomegalovirus (strain
Query: 2 TMLYVAIR 9
T+LYVA R
Sbjct: 250 TLLYVASR 257
>sp|VPAP_HCMVA|DNA polymerase processivity factor|Human cytomegalovirus (strain AD169)
Query: 2 TMLYVAIR 9
T+LYVA R
Sbjct: 250 TLLYVASR 257
>sp|NS3_CVHNL|NON-STRUCTURAL protein 3|Human coronavirus NL63 (HCoV-NL63)
Query: 1 FTMLYVAIR 9
F LYVAIR
Sbjct: 171 FDDLYVAIR 179
>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United
Query: 3 MLYVAIRT 10
MLY +RT
Sbjct: 184 MLYTPLRT 191
>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United
Query: 3 MLYVAIRT 10
MLY +RT
Sbjct: 185 MLYTPLRT 192
>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 2 TMLYVAIRT 10
++LYV IRT
Sbjct: 335 SILYVDIRT 343
>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])
Query: 2 TMLYVAIRT 10
++LYV IRT
Sbjct: 335 SILYVDIRT 343
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 1 FTMLYVAIRT 10
FT+++ I+T
Sbjct: 378 FTLIHTIIKT 387
17|SequenceR|90|81|VTVILFTMLY
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 VTVILFTMLY 10
+T +LFT+LY
Sbjct: 3619 ITPVLFTLLY 3628
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 VTVILFTMLY 10
+T +LFT+LY
Sbjct: 3619 ITPVLFTLLY 3628
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 1 VTVILFTMLY 10
+ V+LF +LY
Sbjct: 297 IKVLLFGILY 306
18|SequenceR|95|86|HAAWAVTVIL
>sp|UL01_HCMVA|GLYCOPROTEIN UL1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HAAWAVTVI 9
HA WA V+
Sbjct: 185 HAGWAAAVV 193
>sp|UL01_HCMVM|GLYCOPROTEIN UL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HAAWAVTVIL 10
H W TV++
Sbjct: 181 HVGWTATVVI 190
>sp|TR14_HCMVA|PROTEIN TRL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HAAWAVTVI 9
HA WA V+
Sbjct: 143 HAVWAGVVV 151
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 AWAVTV 8
AWAVT+
Sbjct: 878 AWAVTI 883
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 HAAWAVTV 8
HA+W + +
Sbjct: 346 HASWTLVI 353
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 HAAWAVTV 8
HA+W + +
Sbjct: 346 HASWTLVI 353
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 HAAWAVTV 8
HA+W + +
Sbjct: 346 HASWTLVI 353
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 HAAWAVTV 8
HA+W + +
Sbjct: 346 HASWTLVI 353
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 HAAWAVTV 8
HA+W + +
Sbjct: 344 HASWTLVI 351
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 1 HAAWAVTV 8
HA+W + +
Sbjct: 346 HASWTLVI 353
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 AAWAVTVI 9
A W +TVI
Sbjct: 4081 ALWDITVI 4088
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 WAVTVI 9
W VTVI
Sbjct: 1253 WPVTVI 1258
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 AAWAVTVI 9
A W +TVI
Sbjct: 4081 ALWDITVI 4088
19|SequenceR|100|91|QFLRTHAAWA
>sp|UL01_HCMVA|GLYCOPROTEIN UL1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LRTHAAWA 10
+ THA WA
Sbjct: 182 VSTHAGWA 189
>sp|VE6_HPV43|PROTEIN E6|Human papillomavirus 43
Query: 1 QFLRTHAAW 9
QF + H+ W
Sbjct: 125 QFFKIHSVW 133
>sp|ORF2_VZVO|MEMBRANE protein 2|Varicella-zoster virus (strain Oka vaccine)
Query: 2 FLRTHA 7
FLRTH
Sbjct: 129 FLRTHG 134
>sp|ORF2_VZVD|MEMBRANE protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 FLRTHA 7
FLRTH
Sbjct: 129 FLRTHG 134
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 QFLRTHAAW 9
QF+ T+ +W
Sbjct: 412 QFVNTNGSW 420
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 LRTHAAWA 10
L TH WA
Sbjct: 884 LATHTDWA 891
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 LRTHAAW 9
L THA W
Sbjct: 872 LATHADW 878
>sp|UL11P_HCMVM|PROTEIN UL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QFLRTHAAWA 10
Q L THA W
Sbjct: 223 QHLATHALWV 232
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 3 LRTHAAWA 10
LRTHA+ A
Sbjct: 828 LRTHASGA 835
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 FLRTHAAW 9
F+RTH +
Sbjct: 379 FIRTHGTF 386
>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2
Query: 1 QFLRTHAAW 9
+ LRT AW
Sbjct: 333 EMLRTCQAW 341
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 RTHAAW 9
R H AW
Sbjct: 35 RLHVAW 40
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 4 RTHAAW 9
R H AW
Sbjct: 35 RLHVAW 40
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 3 LRTHAAWA 10
L TH WA
Sbjct: 884 LATHNDWA 891
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 LRTHAAWA 10
L TH WA
Sbjct: 884 LATHNDWA 891
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 6 HAAW 9
HAAW
Sbjct: 506 HAAW 509
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 LRTHAAWA 10
L TH WA
Sbjct: 884 LATHNDWA 891
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 3 LRTHAAWA 10
L TH WA
Sbjct: 884 LATHNDWA 891
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 LRTHAAW 9
L THA W
Sbjct: 843 LLTHAIW 849
>sp|PRO_ADE03|PROTEASE adenovirus B serotype 3
Query: 1 QFLRTHAAW 9
+FL TH+++
Sbjct: 181 RFLNTHSSY 189
>sp|US12_HCMVM|UNCHARACTERIZED protein US12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LRTHAAW 9
LR HA W
Sbjct: 100 LRCHAYW 106
>sp|US12_HCMVA|UNCHARACTERIZED protein HVLF6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LRTHAAW 9
LR HA W
Sbjct: 100 LRCHAYW 106
>sp|PRO_ADE04|PROTEASE adenovirus E serotype 4
Query: 1 QFLRTHAAW 9
+FL +H+A+
Sbjct: 172 RFLNSHSAY 180
20|SequenceR|105|96|TKGVVQFLRT
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 1 TKGVVQFLRT 10
T G+V F+RT
Sbjct: 190 TVGIVPFMRT 199
>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 TKGVVQFLRT 10
T G+V F+RT
Sbjct: 190 TVGIVPFMRT 199
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 2 KGVVQFLR 9
+G+V FLR
Sbjct: 406 RGIVHFLR 413
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 KGVVQFLRT 10
KG++Q LRT
Sbjct: 1785 KGLLQHLRT 1793
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 KGVVQFLRT 10
KG++Q LRT
Sbjct: 1785 KGLLQHLRT 1793
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 2 KGVVQFLR 9
K +VQFLR
Sbjct: 438 KHIVQFLR 445
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 2 KGVVQFLR 9
K +VQFLR
Sbjct: 441 KPIVQFLR 448
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 2 KGVVQFLR 9
K +VQFLR
Sbjct: 441 KPIVQFLR 448
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 2 KGVVQFLR 9
K +VQFLR
Sbjct: 421 KPIVQFLR 428
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 2 KGVVQFLR 9
K +VQFLR
Sbjct: 434 KPIVQFLR 441
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 2 KGVVQFLR 9
K +VQFLR
Sbjct: 435 KPIVQFLR 442
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 2 KGVVQFLR 9
K +VQFLR
Sbjct: 453 KPIVQFLR 460
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 2 KGVVQFLR 9
K +VQFLR
Sbjct: 438 KPIVQFLR 445
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 2 KGVVQFLR 9
K +VQFLR
Sbjct: 441 KPIVQFLR 448
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 2 KGVVQFLR 9
K +VQFLR
Sbjct: 472 KPIVQFLR 479
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 KGVVQFLRT 10
K V+FLRT
Sbjct: 2028 KNFVEFLRT 2036
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 4 VVQFLR 9
+VQFLR
Sbjct: 444 IVQFLR 449
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 4 VVQFLR 9
+VQFLR
Sbjct: 435 IVQFLR 440
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 4 VVQFLR 9
+VQFLR
Sbjct: 435 IVQFLR 440
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 4 VVQFLR 9
+VQFLR
Sbjct: 439 IVQFLR 444
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 4 VVQFLR 9
+VQFLR
Sbjct: 424 IVQFLR 429
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 4 VVQFLR 9
+VQFLR
Sbjct: 397 IVQFLR 402
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 4 VVQFLR 9
+VQFLR
Sbjct: 449 IVQFLR 454
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 2 KGVVQFLR 9
K +VQ+LR
Sbjct: 450 KPIVQYLR 457
>sp|MATRX_PI3H4|MATRIX protein|Human parainfluenza 3 virus (strain
Query: 1 TKGVVQFL 8
+KG+VQ L
Sbjct: 218 SKGIVQIL 225
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 2 KGVVQFLR 9
K +VQFL+
Sbjct: 385 KEIVQFLK 392
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 TKGVVQFLRT 10
++G+V+ +RT
Sbjct: 2993 SEGIVRIVRT 3002
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 TKGVVQFLRT 10
++G+V+ +RT
Sbjct: 3013 SEGIVRIVRT 3022
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 TKGVVQFLRT 10
++G+V+ +RT
Sbjct: 3043 SEGIVRIVRT 3052
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 TKGVVQFLRT 10
++G+V+ +RT
Sbjct: 2993 SEGIVRIVRT 3002
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 TKGVVQFLRT 10
++G+V+ +RT
Sbjct: 3013 SEGIVRIVRT 3022
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 TKGVVQFLRT 10
++G+V+ +RT
Sbjct: 3043 SEGIVRIVRT 3052
21|SequenceR|110|101|ALTDDTKGVV
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 2 LTDDTKG 8
+TDDTKG
Sbjct: 1 MTDDTKG 7
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 DDTKGVV 10
DDT+GV+
Sbjct: 658 DDTQGVI 664
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 DDTKGVV 10
DDT+GV+
Sbjct: 658 DDTQGVI 664
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 DDTKGVV 10
DDT+GV+
Sbjct: 659 DDTQGVI 665
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LTDDTKGVV 10
LTD+TK ++
Sbjct: 282 LTDNTKNII 290
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 2 LTDDTKG 8
+TDD KG
Sbjct: 1 MTDDNKG 7
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LTDDTKGV 9
LTDD K V
Sbjct: 217 LTDDVKDV 224
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 2 LTDDTKGV 9
LTDD K V
Sbjct: 217 LTDDVKDV 224
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 2 LTDDTKGV 9
LTDD K V
Sbjct: 217 LTDDVKDV 224
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LTDDTKGVV 10
+TD+TK ++
Sbjct: 281 ITDNTKNII 289
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LTDDTKGVV 10
+TD+TK ++
Sbjct: 277 ITDNTKNII 285
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LTDDTKGVV 10
+TD+TK ++
Sbjct: 279 ITDNTKNII 287
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 3 TDDTKGV 9
TDD +GV
Sbjct: 393 TDDVEGV 399
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 TDDTKGV 9
TDD +GV
Sbjct: 393 TDDVEGV 399
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 3 TDDTKG 8
TDDT G
Sbjct: 426 TDDTNG 431
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 ALTDDTKGVV 10
ALTDD+ V
Sbjct: 1055 ALTDDSPSPV 1064
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ALTDDTKGVV 10
ALTDD+ V
Sbjct: 1058 ALTDDSPSPV 1067
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 ALTDDTKGVV 10
ALTDD+ V
Sbjct: 1059 ALTDDSPSPV 1068
22|SequenceR|115|106|ALNLLALTDD
>sp|UL132_HCMVM|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ALNLLALTDD 10
A+NLL TDD
Sbjct: 123 AVNLLDDTDD 132
>sp|UL132_HCMVT|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 ALNLLALTDD 10
A+NLL TDD
Sbjct: 123 AVNLLDDTDD 132
>sp|UL132_HCMVA|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ALNLLALTDD 10
A+NLL TDD
Sbjct: 123 AVNLLDDTDD 132
>sp|NCAP_INBLE|NUCLEOPROTEIN B virus (strain B/Lee/1940)
Query: 4 LLALTDD 10
LLA TDD
Sbjct: 118 LLAATDD 124
>sp|NCAP_INBSI|NUCLEOPROTEIN B virus (strain B/Singapore/222/1979)
Query: 4 LLALTDD 10
LLA TDD
Sbjct: 118 LLAATDD 124
>sp|NCAP_INBP9|NUCLEOPROTEIN B virus (strain B/Panama/45/1990)
Query: 4 LLALTDD 10
LLA TDD
Sbjct: 118 LLAATDD 124
>sp|NCAP_INBAD|NUCLEOPROTEIN B virus (strain B/Ann
Query: 4 LLALTDD 10
LLA TDD
Sbjct: 118 LLAATDD 124
>sp|NCAP_INBAC|NUCLEOPROTEIN B virus (strain B/Ann
Query: 4 LLALTDD 10
LLA TDD
Sbjct: 118 LLAATDD 124
>sp|NCAP_INBAA|NUCLEOPROTEIN B virus (strain B/Ann
Query: 4 LLALTDD 10
LLA TDD
Sbjct: 118 LLAATDD 124
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 ALNLLALTD 9
++ LLA+TD
Sbjct: 2837 SVTLLAMTD 2845
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 1 ALNLLALTDD 10
AL LAL DD
Sbjct: 266 ALFTLALVDD 275
23|SequenceR|120|111|ITMMCALNLL
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 ITMMCALNL 9
+TMMC +L
Sbjct: 2172 MTMMCVASL 2180
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 MMCALNLL 10
M C LN+L
Sbjct: 2912 MSCLLNVL 2919
24|SequenceR|125|116|YPLFTITMMC
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 YPLFTITMM 9
YP FTI M
Sbjct: 755 YPRFTIPFM 763
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 1 YPLFTITM 8
YP+ +TM
Sbjct: 177 YPMLNVTM 184
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 YPLFTITMMC 10
+P++T+ ++C
Sbjct: 682 HPVYTVIVLC 691
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 YPLFTITM 8
YP+ +TM
Sbjct: 177 YPVLNVTM 184
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 YPLFTITM 8
YP+ +TM
Sbjct: 161 YPVLNVTM 168
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 1 YPLFTITM 8
YP+ +TM
Sbjct: 177 YPVLNVTM 184
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 1 YPLFTITM 8
YP+ +TM
Sbjct: 161 YPVLNVTM 168
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 YPLFTITM 8
YP+ +TM
Sbjct: 161 YPVLNVTM 168
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 1 YPLFTITM 8
YP+ +TM
Sbjct: 177 YPVLNVTM 184
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 1 YPLFTITM 8
YP+ +TM
Sbjct: 177 YPVLNVTM 184
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 YPLFTITM 8
YP+ +TM
Sbjct: 177 YPVLNVTM 184
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 1 YPLFTITM 8
YP+ +TM
Sbjct: 177 YPVLNVTM 184
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 YPLFTITM 8
YP+ +TM
Sbjct: 161 YPVLNVTM 168
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 1 YPLFTITM 8
YP+ +TM
Sbjct: 177 YPVLNVTM 184
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 1 YPLFTITM 8
YP+ +TM
Sbjct: 177 YPVLNVTM 184
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 1 YPLFTITM 8
YP+ +TM
Sbjct: 177 YPVLNVTM 184
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 1 YPLFTITM 8
YP+ +TM
Sbjct: 177 YPVLNVTM 184
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 1 YPLFTITM 8
YP+ +TM
Sbjct: 177 YPVLNVTM 184
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 1 YPLFTITM 8
YP+ +TM
Sbjct: 177 YPVLNVTM 184
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 YPLFTITM 8
YP+ +TM
Sbjct: 177 YPVLNVTM 184
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 1 YPLFTITM 8
YP+ +TM
Sbjct: 177 YPVLNVTM 184
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 1 YPLFTITM 8
YP+ +TM
Sbjct: 177 YPVLNVTM 184
>sp|HEMA_I70A0|HEMAGGLUTININ A virus (strain A/Qu/7/1970
Query: 1 YPLFTITM 8
YP+ +TM
Sbjct: 161 YPVLNVTM 168
>sp|HEMA_I69A0|HEMAGGLUTININ A virus (strain A/England/878/1969
Query: 1 YPLFTITM 8
YP+ +TM
Sbjct: 161 YPVLNVTM 168
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 YPLFTITMM 9
YP +TIT++
Sbjct: 682 YPYWTITVL 690
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 5 TITMMC 10
TIT MC
Sbjct: 445 TITFMC 450
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 TITMMC 10
TIT++C
Sbjct: 101 TITLLC 106
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 TITMMC 10
TIT++C
Sbjct: 101 TITLLC 106
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 5 TITMMC 10
T+TM C
Sbjct: 180 TVTMQC 185
25|SequenceR|130|121|MLSFTYPLFT
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 3 SFTYPL 8
+FTYPL
Sbjct: 224 NFTYPL 229
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 4 FTYPL 8
FTYPL
Sbjct: 225 FTYPL 229
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 4 FTYPL 8
FTYPL
Sbjct: 225 FTYPL 229
>sp|VL2_HPV45|MINOR capsid protein L2|Human papillomavirus 45
Query: 3 SFTYPLFT 10
SFTYP ++
Sbjct: 367 SFTYPKYS 374
>sp|GK_HHV19|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R19)
Query: 3 SFTYPLF 9
+ TYPLF
Sbjct: 244 AITYPLF 250
>sp|GK_HHV1R|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R15)
Query: 3 SFTYPLF 9
+ TYPLF
Sbjct: 244 AITYPLF 250
>sp|GK_HHV1M|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain MP)
Query: 3 SFTYPLF 9
+ TYPLF
Sbjct: 244 AITYPLF 250
>sp|GK_HHV1K|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain KOS)
Query: 3 SFTYPLF 9
+ TYPLF
Sbjct: 244 AITYPLF 250
>sp|GK_HHV11|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain 17)
Query: 3 SFTYPLF 9
+ TYPLF
Sbjct: 244 AITYPLF 250
>sp|UL119_HCMVM|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 4 FTYPLF 9
FTYP++
Sbjct: 185 FTYPIY 190
>sp|UL119_HCMVA|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 4 FTYPLF 9
FTYP++
Sbjct: 185 FTYPIY 190
26|SequenceR|135|126|DPFTVMLSFT
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 1 DPFTVMLSF 9
D F++M+SF
Sbjct: 852 DQFSIMVSF 860
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DPFTVMLS 8
DP VMLS
Sbjct: 1786 DPMAVMLS 1793
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DPFTVMLS 8
DP VMLS
Sbjct: 1787 DPMAVMLS 1794
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DPFTVMLS 8
DP VMLS
Sbjct: 1787 DPMAVMLS 1794
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DPFTVMLS 8
DP VMLS
Sbjct: 1786 DPMAVMLS 1793
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DPFTVMLS 8
DP VMLS
Sbjct: 1784 DPMAVMLS 1791
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DPFTVMLS 8
DP VMLS
Sbjct: 1786 DPMAVMLS 1793
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DPFTVMLS 8
DP +MLS
Sbjct: 1786 DPMAIMLS 1793
>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983
Query: 1 DPFTVMLSFT 10
D TVM +FT
Sbjct: 421 DKSTVMAAFT 430
>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979
Query: 1 DPFTVMLSFT 10
D TVM +FT
Sbjct: 421 DKSTVMAAFT 430
>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978
Query: 1 DPFTVMLSFT 10
D TVM +FT
Sbjct: 421 DKSTVMAAFT 430
>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977
Query: 1 DPFTVMLSFT 10
D TVM +FT
Sbjct: 421 DKSTVMAAFT 430
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 DPFTVMLSF 9
DP T LSF
Sbjct: 902 DPVTESLSF 910
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 DPFTVMLSF 9
DP T LSF
Sbjct: 892 DPVTESLSF 900
>sp|KITH_VZVO|THYMIDINE kinase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 DPFTVMLS 8
+P+ +MLS
Sbjct: 121 EPYKIMLS 128
>sp|KITH_VZVD|THYMIDINE kinase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 DPFTVMLS 8
+P+ +MLS
Sbjct: 121 EPYKIMLS 128
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 DPFTVMLSF 9
DP T LSF
Sbjct: 902 DPVTESLSF 910
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 DPFTVMLSF 9
DP T LSF
Sbjct: 902 DPVTESLSF 910
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 DPFTVMLSF 9
DP T LSF
Sbjct: 902 DPVTESLSF 910
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 DPFTVMLSF 9
DP T LSF
Sbjct: 902 DPVTESLSF 910
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 1 DPFTVMLSFT 10
D TVM +FT
Sbjct: 421 DRTTVMAAFT 430
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 1 DPFTVMLSFT 10
D TVM +FT
Sbjct: 421 DRTTVMAAFT 430
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKTTIMAAFT 430
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKTTIMAAFT 430
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKTTIMAAFT 430
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKTTIMAAFT 430
>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKTTIMAAFT 430
>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKTTIMAAFT 430
>sp|NCAP_I77AA|NUCLEOPROTEIN A virus (strain A/Brazil/11/1978
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKTTIMAAFT 430
>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKTTIMAAFT 430
>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKTTIMAAFT 430
>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKTTIMAAFT 430
>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKTTIMAAFT 430
>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKTTIMAAFT 430
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKTTIMAAFT 430
>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKTTIMAAFT 430
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKTTIMAAFT 430
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKATIMAAFT 430
>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKSTIMAAFT 430
>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKSTIMAAFT 430
>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKSTIMAAFT 430
>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKSTIMAAFT 430
>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKSTIMAAFT 430
>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKSTIMAAFT 430
>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKSTIMAAFT 430
>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKSTIMAAFT 430
>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKSTIMAAFT 430
>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKSTIMAAFT 430
>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972
Query: 1 DPFTVMLSFT 10
D T+M +FT
Sbjct: 421 DKSTIMAAFT 430
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DPFTVMLS 8
DP +MLS
Sbjct: 1786 DPMAMMLS 1793
27|SequenceR|140|131|IGLPVDPFTV
>sp|VL2_HPV65|MINOR capsid protein L2|Human papillomavirus 65
Query: 2 GLPVDPFT 9
GLP +PFT
Sbjct: 479 GLPTEPFT 486
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 4 PVDPF 8
P+DPF
Sbjct: 1457 PIDPF 1461
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 4 PVDPF 8
P+DPF
Sbjct: 1454 PIDPF 1458
>sp|SHDAG_HDVTW|SMALL delta antigen|Hepatitis delta virus genotype II
Query: 2 GLPVDPFT 9
G+P PFT
Sbjct: 173 GVPESPFT 180
>sp|SHDAG_HDVD3|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 2 GLPVDPFT 9
G+P PFT
Sbjct: 173 GVPESPFT 180
>sp|LHDAG_HDVTW|LARGE delta antigen|Hepatitis delta virus genotype II
Query: 2 GLPVDPFT 9
G+P PFT
Sbjct: 173 GVPESPFT 180
>sp|SHDAG_HDVM2|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 2 GLPVDPFT 9
G+P PFT
Sbjct: 173 GVPESPFT 180
>sp|SHDAG_HDVM1|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 2 GLPVDPFT 9
G+P PFT
Sbjct: 173 GVPESPFT 180
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GLPVDPF 8
GLPVD F
Sbjct: 584 GLPVDDF 590
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 2 GLPVDPF 8
GLPVD F
Sbjct: 584 GLPVDDF 590
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 2 GLPVDP 7
GLPV+P
Sbjct: 356 GLPVNP 361
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IGLPVDPF 8
+GL VDP+
Sbjct: 654 VGLAVDPW 661
Query: 3 LPVDPF 8
+PVDP+
Sbjct: 324 IPVDPY 329
>sp|SHDAG_HDVNA|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 2 GLPVDPFT 9
G+P PFT
Sbjct: 173 GVPESPFT 180
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 2 GLPVDP 7
GLPV+P
Sbjct: 356 GLPVNP 361
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LPVDPF 8
+PVDP+
Sbjct: 324 IPVDPY 329
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LPVDPF 8
+PVDP+
Sbjct: 324 IPVDPY 329
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LPVDPF 8
+PVDP+
Sbjct: 324 IPVDPY 329
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LPVDPF 8
+PVDP+
Sbjct: 324 IPVDPY 329
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LPVDPF 8
+PVDP+
Sbjct: 324 IPVDPY 329
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LPVDPF 8
+PVDP+
Sbjct: 324 IPVDPY 329
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LPVDPF 8
+PVDP+
Sbjct: 324 IPVDPY 329
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LPVDPF 8
+PVDP+
Sbjct: 324 IPVDPY 329
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LPVDPF 8
+PVDP+
Sbjct: 324 IPVDPY 329
>sp|VL2_HPV04|MINOR capsid protein L2|Human papillomavirus 4
Query: 2 GLPVDPF 8
GLP +PF
Sbjct: 482 GLPTEPF 488
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 3 LPVDPF 8
P+DPF
Sbjct: 1443 FPLDPF 1448
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 3 LPVDPFTV 10
+P+D FTV
Sbjct: 2081 VPMDKFTV 2088
>sp|LHDAG_HDVD3|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 2 GLPVDPFT 9
G+P PFT
Sbjct: 173 GVPESPFT 180
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LPVDPF 8
+PVDP+
Sbjct: 324 IPVDPY 329
>sp|UL25_HHV6G|VIRION-PACKAGING protein UL25 homolog|Human herpesvirus 6A (strain GS)
Query: 4 PVDPF 8
P+DPF
Sbjct: 124 PLDPF 128
>sp|LHDAG_HDVM1|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 2 GLPVDPFT 9
G+P PFT
Sbjct: 173 GVPESPFT 180
>sp|LHDAG_HDVM2|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 2 GLPVDPFT 9
G+P PFT
Sbjct: 173 GVPESPFT 180
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LPVDPF 8
+PVDP+
Sbjct: 303 IPVDPY 308
>sp|ICP27_HHV7J|MRNA export factor ICP27 homolog|Human herpesvirus 7 (strain JI)
Query: 3 LPVDP 7
LP+DP
Sbjct: 209 LPIDP 213
>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain
Query: 2 GLPVDPF 8
G PV+PF
Sbjct: 411 GGPVNPF 417
>sp|LHDAG_HDVNA|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 2 GLPVDPFT 9
G+P PFT
Sbjct: 173 GVPESPFT 180
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GLPVDP 7
G+P DP
Sbjct: 74 GVPTDP 79
>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)
Query: 4 PVDPF 8
P+DPF
Sbjct: 124 PLDPF 128
>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 PVDPF 8
P+DPF
Sbjct: 124 PLDPF 128
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 GLPVDP 7
G PVDP
Sbjct: 548 GSPVDP 553
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GLPVDP 7
G PVDP
Sbjct: 548 GSPVDP 553
>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain
Query: 2 GLPVDPF 8
G PV+PF
Sbjct: 411 GGPVNPF 417
>sp|MATRX_PI2HT|MATRIX protein|Human parainfluenza 2 virus (strain
Query: 1 IGLPVDP 7
I LP DP
Sbjct: 4 ISLPADP 10
>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain
Query: 2 GLPVDPF 8
G PV+PF
Sbjct: 411 GGPVNPF 417
>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)
Query: 2 GLPVDPF 8
G PV+PF
Sbjct: 411 GGPVNPF 417
>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)
Query: 2 GLPVDPF 8
G PV+PF
Sbjct: 411 GGPVNPF 417
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 LPVDPFTV 10
+P+D FTV
Sbjct: 2144 VPMDRFTV 2151
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 LPVDPFTV 10
+P+D FTV
Sbjct: 2144 VPMDRFTV 2151
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 3 LPVDPFTV 10
+P+D FTV
Sbjct: 2099 VPMDRFTV 2106
>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)
Query: 6 DPFTV 10
DPFTV
Sbjct: 420 DPFTV 424
>sp|VP40_MABVO|MATRIX protein VP40|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 IGLPVDPFTV 10
I LP D F+V
Sbjct: 249 ISLPADMFSV 258
>sp|VP40_MABVM|MATRIX protein VP40|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 IGLPVDPFTV 10
I LP D F+V
Sbjct: 249 ISLPADMFSV 258
>sp|VP40_MABVA|MATRIX protein VP40|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 IGLPVDPFTV 10
I LP D F+V
Sbjct: 249 ISLPADMFSV 258
>sp|VP40_MABVR|MATRIX protein VP40|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 IGLPVDPFTV 10
I LP D F+V
Sbjct: 249 ISLPADMFSV 258
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 6 DPFTV 10
DPFTV
Sbjct: 420 DPFTV 424
>sp|VP40_MABVP|MATRIX protein VP40|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 IGLPVDPFTV 10
I LP D F+V
Sbjct: 249 ISLPADMFSV 258
28|SequenceR|145|136|VCFLFIGLPV
>sp|U23_HHV6Z|PROTEIN U23|Human herpesvirus 6B (strain Z29)
Query: 2 CFLFIGLPV 10
CFL IG+ V
Sbjct: 11 CFLMIGICV 19
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 VCFLFIG 7
+C+LFIG
Sbjct: 3758 LCYLFIG 3764
>sp|IR10_HCMVM|PROTEIN IRL10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VCFLFIGL 8
VCFL +GL
Sbjct: 9 VCFLALGL 16
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 VCFLFIG 7
+C+LFIG
Sbjct: 3758 LCYLFIG 3764
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 3 FLFIGLPV 10
FLFI +P+
Sbjct: 7 FLFIDVPI 14
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 3 FLFIGLPV 10
FLFI +P+
Sbjct: 7 FLFIDVPI 14
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 3 FLFIGLPV 10
FLFI +P+
Sbjct: 7 FLFIDVPI 14
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 3 FLFIGLPV 10
FLFI +P+
Sbjct: 7 FLFIDVPI 14
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 FLFIGLPV 10
F+FIG P+
Sbjct: 180 FMFIGSPM 187
>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)
Query: 3 FLFIGLPV 10
F+FIG P+
Sbjct: 180 FMFIGSPM 187
>sp|A26_VACCC|PUTATIVE A-type inclusion protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 FLFIGLPV 10
F+FIG P+
Sbjct: 180 FMFIGSPM 187
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 2 CFLFIGLP 9
C+L IG P
Sbjct: 931 CYLSIGWP 938
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 2 CFLFIGL 8
CFLF+ +
Sbjct: 544 CFLFLAI 550
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 2 CFLFIGL 8
CFLF+ +
Sbjct: 544 CFLFLAI 550
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 2 CFLFIGL 8
CFLF+ +
Sbjct: 544 CFLFLAI 550
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 2 CFLFIGL 8
CFLF+ +
Sbjct: 544 CFLFLAI 550
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 2 CFLFIGL 8
CFLF+ +
Sbjct: 544 CFLFLAI 550
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 2 CFLFIGL 8
CFLF+ +
Sbjct: 544 CFLFLAI 550
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 2 CFLFIGL 8
CFLF+ +
Sbjct: 544 CFLFLAI 550
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 2 CFLFIGL 8
CFLF+ +
Sbjct: 544 CFLFLAI 550
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 2 CFLFIGL 8
CFLF+ +
Sbjct: 544 CFLFLAI 550
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 2 CFLFIGL 8
CFLF+ +
Sbjct: 544 CFLFLAI 550
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 2 CFLFIGLP 9
C LF G P
Sbjct: 432 CLLFYGPP 439
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 VCFLFIGLPV 10
VC + IGL V
Sbjct: 2168 VCLMTIGLVV 2177
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 4 LFIGLP 9
+F+GLP
Sbjct: 1061 MFVGLP 1066
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 4 LFIGLPV 10
LF+ LPV
Sbjct: 110 LFVSLPV 116
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CFLFIGLP 9
CFL LP
Sbjct: 500 CFLVANLP 507
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CFLFIGLP 9
CFL LP
Sbjct: 500 CFLVANLP 507
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 2 CFLFIGLP 9
C LF G P
Sbjct: 427 CILFYGPP 434
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 5 FIGLPV 10
F+GLP+
Sbjct: 510 FLGLPI 515
>sp|GM_VZVO|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Oka vaccine)
Query: 1 VCFLFIGL 8
+C LF+ L
Sbjct: 245 ICILFVSL 252
>sp|GM_VZVD|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VCFLFIGL 8
+C LF+ L
Sbjct: 245 ICILFVSL 252
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 4 LFIGLPV 10
LF+ LPV
Sbjct: 110 LFVSLPV 116
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 VCFLFIGL 8
+ FLFIG+
Sbjct: 7 LAFLFIGV 14
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 VCFLFIGL 8
+ FLFIG+
Sbjct: 7 LAFLFIGV 14
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 VCFLFIGL 8
+ FLFIG+
Sbjct: 7 LAFLFIGV 14
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 VCFLFIGL 8
+ FLFIG+
Sbjct: 7 LAFLFIGV 14
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 1 VCFLFIGL 8
+ FLFIG+
Sbjct: 7 LAFLFIGV 14
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 2 CFLFIGL 8
C L IGL
Sbjct: 454 CILLIGL 460
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 CFLFIGL 8
C L IGL
Sbjct: 453 CILLIGL 459
>sp|PG155_CWPXB|ENVELOPE protein OPG155|Cowpox virus (strain Brighton Red)
Query: 1 VCFLFI 6
VC LFI
Sbjct: 16 VCLLFI 21
>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)
Query: 2 CFLFIGLPV 10
CF + LP+
Sbjct: 345 CFHIVTLPI 353
>sp|PG155_MONPZ|ENVELOPE protein OPG155|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 1 VCFLFI 6
VC LFI
Sbjct: 16 VCLLFI 21
>sp|PG155_MONPV|ENVELOPE protein OPG155|Monkeypox virus (MPXV)
Query: 1 VCFLFI 6
VC LFI
Sbjct: 16 VCLLFI 21
>sp|PG155_CWPXG|ENVELOPE protein OPG155|Cowpox virus (strain GRI-90 /
Query: 1 VCFLFI 6
VC LFI
Sbjct: 16 VCLLFI 21
29|SequenceR|150|141|IAIVCVCFLF
>sp|NEC2_HHV6Z|NUCLEAR egress protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 IAIVCVCFLF 10
+AIV +CFL
Sbjct: 246 VAIVSICFLL 255
>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)
Query: 1 IAIVCVCFLF 10
+A+ C CFL
Sbjct: 419 VALTCSCFLL 428
>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 AIVCVC 7
A+VC+C
Sbjct: 43 AVVCIC 48
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 IAIVCVCF 8
I I CVC+
Sbjct: 322 IQISCVCY 329
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 IAIVCVCF 8
I I CVC+
Sbjct: 322 IQISCVCY 329
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 IVCVCFLF 10
++C+ FLF
Sbjct: 371 VLCILFLF 378
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 IAIVCVCFLF 10
IAI+C+ L+
Sbjct: 595 IAIICLAILY 604
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 IAIVCVCFLF 10
+++ CVC F
Sbjct: 75 LSVACVCTKF 84
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 IAIVCVCFLF 10
+++ CVC F
Sbjct: 75 LSVACVCTKF 84
>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P
Query: 2 AIVCVCF 8
I CVC+
Sbjct: 339 GIFCVCY 345
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 IVCVCFLF 10
++C+ FLF
Sbjct: 4 LLCLAFLF 11
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 IAIVCVCFLF 10
IAI+C+ L+
Sbjct: 595 IAIICLAVLY 604
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 VCVCF 8
VCVCF
Sbjct: 6196 VCVCF 6200
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 1 IAIVCVCFL 9
+ ++C+C L
Sbjct: 47 VVLMCLCIL 55
>sp|E3GL_ADE03|EARLY E3 18.5 kDa glycoprotein|Human adenovirus B serotype 3
Query: 2 AIVCVC 7
AI+CVC
Sbjct: 147 AIICVC 152
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 IAIVCVCFLF 10
IAI VCF+
Sbjct: 1286 IAIGIVCFVL 1295
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 VCVCFL 9
+C CFL
Sbjct: 176 ICRCFL 181
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 VCVCFL 9
+C+CF+
Sbjct: 3074 LCICFV 3079
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 VCVCFL 9
+C+CF+
Sbjct: 3074 LCICFV 3079
30|SequenceR|155|146|AQVVGIAIVC
>sp|PG144_VARV|VIRION membrane protein OPG144 precursor|Variola virus
Query: 1 AQVVGIAIVC 10
VG++IVC
Sbjct: 112 GNTVGMSIVC 121
>sp|PG144_VAR67|VIRION membrane protein OPG144 precursor|Variola virus (isolate
Query: 1 AQVVGIAIVC 10
VG++IVC
Sbjct: 112 GNTVGMSIVC 121
>sp|PG144_VACCC|VIRION membrane protein OPG144 precursor|Vaccinia virus (strain
Query: 1 AQVVGIAIVC 10
VG++IVC
Sbjct: 112 GNTVGMSIVC 121
>sp|PG144_MONPV|VIRION membrane protein OPG144 precursor|Monkeypox virus (MPXV)
Query: 1 AQVVGIAIVC 10
VG++IVC
Sbjct: 113 GNTVGMSIVC 122
31|SequenceR|160|151|YGVILAQVVG
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 1 YGVILAQVV 9
YG+ILA+++
Sbjct: 138 YGLILAEII 146
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 YGVILAQVV 9
YG+ L QV+
Sbjct: 448 YGLSLPQVI 456
>sp|PP85_HHV6Z|PHOSPHOPROTEIN 85|Human herpesvirus 6B (strain Z29)
Query: 1 YGVILAQVV 9
YG+ L QV+
Sbjct: 448 YGLSLEQVI 456
>sp|E321_ADE03|EARLY E3 20.5 kDa glycoprotein|Human adenovirus B serotype 3
Query: 2 GVILAQVVG 10
G+I A VVG
Sbjct: 151 GIITAVVVG 159
32|SequenceR|165|156|PFHFAYGVIL
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 PFHFAYGVI 9
P +AYG+I
Sbjct: 235 PIAYAYGII 243
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 PFHFAY 6
P+HF Y
Sbjct: 313 PYHFKY 318
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 1 PFHFAY 6
P+HF Y
Sbjct: 313 PYHFKY 318
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 PFHFAYGVIL 10
PF A G++L
Sbjct: 2447 PFSLAEGIVL 2456
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 PFHFAYGVIL 10
PF A G++L
Sbjct: 2447 PFSLAEGIVL 2456
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 PFHFAYGVIL 10
PF A G++L
Sbjct: 2446 PFSLAEGIVL 2455
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 PFHFAYGVIL 10
PF A G++L
Sbjct: 2446 PFSLAEGIVL 2455
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 PFHFAYGVIL 10
PF A G++L
Sbjct: 2447 PFSLAEGIVL 2456
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 PFHFAYGVIL 10
PF A G++L
Sbjct: 2446 PFSLAEGIVL 2455
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 PFHFAYGVIL 10
PF A G++L
Sbjct: 2446 PFSLAEGIVL 2455
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 PFHFAYGVIL 10
PF A G++L
Sbjct: 2446 PFSLAEGIVL 2455
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PFHFAYG 7
PFH YG
Sbjct: 949 PFHMFYG 955
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PFHFAYG 7
PFH YG
Sbjct: 949 PFHMFYG 955
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PFHFAYG 7
PFH YG
Sbjct: 949 PFHMFYG 955
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 PFHFAYG 7
PF+F YG
Sbjct: 582 PFNFFYG 588
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 PFHFAYG 7
PF+F YG
Sbjct: 582 PFNFFYG 588
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 1 PFHFAY 6
P HF Y
Sbjct: 30 PLHFQY 35
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 1 PFHFAY 6
P HF Y
Sbjct: 30 PLHFQY 35
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 PFHFAY 6
P HF Y
Sbjct: 30 PLHFQY 35
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PFHFAY 6
P HF Y
Sbjct: 30 PLHFQY 35
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PFHFAY 6
P HF Y
Sbjct: 22 PLHFQY 27
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 1 PFHFAY 6
P HF Y
Sbjct: 30 PLHFQY 35
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 1 PFHFAY 6
P HF Y
Sbjct: 30 PLHFQY 35
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 1 PFHFAY 6
P HF Y
Sbjct: 30 PLHFQY 35
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 1 PFHFAY 6
P HF Y
Sbjct: 30 PLHFQY 35
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 5 AYGVIL 10
AYGV+L
Sbjct: 368 AYGVVL 373
>sp|US02_HHV11|PROTEIN US2|Human herpesvirus 1 (strain 17)
Query: 2 FHFAYGVIL 10
+ + YGV+L
Sbjct: 195 YEYQYGVVL 203
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 3 HFAYGVI 9
H+A GVI
Sbjct: 611 HYATGVI 617
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 3 HFAYGVI 9
H+A GVI
Sbjct: 627 HYATGVI 633
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 HFAYGVIL 10
HF+ GV++
Sbjct: 1154 HFSLGVLV 1161
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 HFAYGVIL 10
HF+ GV++
Sbjct: 1154 HFSLGVLV 1161
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 HFAYGVIL 10
HF+ GV++
Sbjct: 1150 HFSLGVLV 1157
33|SequenceR|170|161|PSLLHPFHFA
>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 PSLLHPFHFA 10
PS+LHP +A
Sbjct: 241 PSILHPIDYA 250
>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 PSLLHPFHFA 10
PS+LHP +A
Sbjct: 241 PSILHPIDYA 250
>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 PSLLHPFHFA 10
PS+LHP +A
Sbjct: 241 PSILHPIDYA 250
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 1 PSLLHPFHFA 10
PS+LHP +A
Sbjct: 242 PSILHPIDYA 251
>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 PSLLHPFHFA 10
PS+LHP +A
Sbjct: 242 PSILHPIDYA 251
>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate
Query: 1 PSLLHPFHFA 10
PS+LHP +A
Sbjct: 242 PSILHPIDYA 251
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 PSLLHPFHFA 10
PS+LHP A
Sbjct: 250 PSILHPIDHA 259
>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 1 PSLLHPFHFA 10
PS+LHP A
Sbjct: 250 PSILHPIDHA 259
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 PSLLHPFHFA 10
PS+LHP A
Sbjct: 250 PSILHPIDHA 259
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 PSLLHPFHFA 10
PS+LHP A
Sbjct: 250 PSILHPIDHA 259
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 PSLLHPFHFA 10
PS+LHP A
Sbjct: 256 PSILHPIDHA 265
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 PSLLHPFHFA 10
PS+LHP A
Sbjct: 252 PSILHPIDHA 261
>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 PSLLHPFHFA 10
PS+LHP A
Sbjct: 249 PSILHPIDHA 258
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 PSLLHPFHFA 10
PS+LHP A
Sbjct: 250 PSILHPIDHA 259
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PSLLHPFHFA 10
P L +PFH A
Sbjct: 89 PELYNPFHVA 98
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 1 PSLLHPFHF 9
PSL HP F
Sbjct: 447 PSLCHPIIF 455
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 5 HPFH 8
HPFH
Sbjct: 409 HPFH 412
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 SLLHPFH 8
+ +HPFH
Sbjct: 448 TCMHPFH 454
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 SLLHPFH 8
+ +HPFH
Sbjct: 448 TCMHPFH 454
>sp|PG060_MONPV|PROTEIN OPG060|Monkeypox virus (MPXV)
Query: 3 LLHPFHF 9
L PFHF
Sbjct: 80 LYSPFHF 86
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 2 SLLHPFH 8
S HPFH
Sbjct: 449 SCTHPFH 455
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 2 SLLHPFH 8
S HPFH
Sbjct: 449 SCTHPFH 455
>sp|PG060_VARV|PROTEIN OPG060|Variola virus
Query: 3 LLHPFHF 9
L PFHF
Sbjct: 83 LYSPFHF 89
>sp|PG060_VAR67|PROTEIN OPG060|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 LLHPFHF 9
L PFHF
Sbjct: 83 LYSPFHF 89
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 2 SLLHPFH 8
S HPFH
Sbjct: 449 SCTHPFH 455
>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus
Query: 4 LHPFHFA 10
HP H+A
Sbjct: 685 FHPRHYA 691
>sp|MCEL_VAR67|MRNA-CAPPING enzyme catalytic subunit|Variola virus (isolate
Query: 4 LHPFHFA 10
HP H+A
Sbjct: 685 FHPRHYA 691
>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 4 LHPFHFA 10
HP H+A
Sbjct: 685 FHPRHYA 691
>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 LHPFHFA 10
HP H+A
Sbjct: 685 FHPRHYA 691
>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 4 LHPFHFA 10
HP H+A
Sbjct: 685 FHPRHYA 691
>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)
Query: 4 LHPFHFA 10
HP H+A
Sbjct: 686 FHPRHYA 692
>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 4 LHPFHFA 10
HP H+A
Sbjct: 685 FHPRHYA 691
>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 4 LHPFHFA 10
HP H+A
Sbjct: 685 FHPRHYA 691
>sp|PG060_VACCC|PROTEIN OPG060|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 LLHPFHF 9
L PFHF
Sbjct: 80 LYSPFHF 86
>sp|PG060_VACCP|PROTEIN OPG060|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 LLHPFHF 9
L PFHF
Sbjct: 80 LYSPFHF 86
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 PSLLHP 6
PS++HP
Sbjct: 167 PSIIHP 172
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 2 SLLHPF 7
S LHPF
Sbjct: 258 SFLHPF 263
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LHPFHF 9
LHPF F
Sbjct: 77 LHPFGF 82
>sp|NEF_HV190|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 SLLHP 6
SLLHP
Sbjct: 164 SLLHP 168
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 5 HPFHF 9
+PFHF
Sbjct: 1951 NPFHF 1955
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 5 HPFHF 9
+PFHF
Sbjct: 1951 NPFHF 1955
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 5 HPFH 8
HPFH
Sbjct: 452 HPFH 455
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 5 HPFHF 9
+PFHF
Sbjct: 1951 NPFHF 1955
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 4 LHPFHF 9
LHPF F
Sbjct: 77 LHPFGF 82
>sp|YVGA_VACCC|UNCHARACTERIZED 14.3 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PSLLHPFHF 9
PS+L+P +
Sbjct: 29 PSVLYPLEY 37
>sp|VL2_HPV33|MINOR capsid protein L2|Human papillomavirus 33
Query: 1 PSLLHP 6
PS+LHP
Sbjct: 166 PSVLHP 171
>sp|VL2_HPV67|MINOR capsid protein L2|Human papillomavirus 67
Query: 1 PSLLHPF 7
PS+L PF
Sbjct: 166 PSVLRPF 172
>sp|VL2_HPV35|MINOR capsid protein L2|Human papillomavirus 35
Query: 1 PSLLHP 6
PS+LHP
Sbjct: 165 PSVLHP 170
>sp|NEF_HV1EL|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 SLLHP 6
SLLHP
Sbjct: 164 SLLHP 168
>sp|NEF_HV1SE|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 SLLHP 6
SLLHP
Sbjct: 164 SLLHP 168
34|SequenceR|175|166|SRQIQPSLLH
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 RQIQPSL 8
RQ+QPSL
Sbjct: 62 RQLQPSL 68
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 RQIQPSL 8
RQ+QPSL
Sbjct: 62 RQLQPSL 68
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 RQIQPSL 8
RQ+QPSL
Sbjct: 62 RQLQPSL 68
>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 RQIQPSL 8
RQ+QPSL
Sbjct: 62 RQLQPSL 68
>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 RQIQPSL 8
RQ+QPSL
Sbjct: 62 RQLQPSL 68
>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 RQIQPSL 8
RQ+QPSL
Sbjct: 62 RQLQPSL 68
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RQIQPSLLH 10
+QI P L H
Sbjct: 844 KQITPELKH 852
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 RQIQPSLLH 10
R +Q +LLH
Sbjct: 933 RYVQAALLH 941
>sp|PRO_ADE03|PROTEASE adenovirus B serotype 3
Query: 1 SRQIQPSL 8
S Q+QP+L
Sbjct: 165 SPQVQPTL 172
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 1 SRQIQPSLLH 10
S+Q+Q +LH
Sbjct: 23 SKQLQHHILH 32
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 5 QPSLLH 10
QP+L+H
Sbjct: 489 QPTLIH 494
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 QIQPSL 8
QIQPS+
Sbjct: 63 QIQPSI 68
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 QIQPSL 8
Q+QPSL
Sbjct: 63 QLQPSL 68
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 QIQPSL 8
Q+QPSL
Sbjct: 63 QLQPSL 68
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 QIQPSL 8
Q+QPSL
Sbjct: 63 QLQPSL 68
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 QIQPSL 8
Q+QPSL
Sbjct: 63 QLQPSL 68
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 QIQPSL 8
Q+QPSL
Sbjct: 63 QLQPSL 68
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 QIQPSL 8
Q+QPSL
Sbjct: 63 QLQPSL 68
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 QIQPSL 8
Q+QPSL
Sbjct: 63 QLQPSL 68
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 QIQPSL 8
Q+QPSL
Sbjct: 63 QLQPSL 68
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 QIQPSL 8
Q+QPSL
Sbjct: 63 QLQPSL 68
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 QIQPSL 8
Q+QPSL
Sbjct: 63 QLQPSL 68
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 QIQPSL 8
Q+QPSL
Sbjct: 63 QLQPSL 68
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 QIQPSL 8
Q+QPSL
Sbjct: 63 QLQPSL 68
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 QIQPSL 8
Q+QPSL
Sbjct: 63 QLQPSL 68
35|SequenceR|180|171|LARHASRQIQ
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 1 LARHASRQI 9
L RH RQ+
Sbjct: 1054 LVRHVERQL 1062
>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)
Query: 1 LARHASRQI 9
L RH RQ+
Sbjct: 770 LVRHVERQL 778
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LARHASRQI 9
L RH RQ+
Sbjct: 1054 LVRHVERQL 1062
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 LARHASR 7
LARHA R
Sbjct: 1705 LARHAGR 1711
>sp|VE8E2_HPV28|PROTEIN E8^E2C|Human papillomavirus 28
Query: 1 LARHASRQI 9
+A+H++R+I
Sbjct: 1 MAKHSTREI 9
>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus
Query: 1 LARHASRQIQ 10
LARH S + +
Sbjct: 287 LARHMSERFE 296
36|SequenceR|185|176|VHRRYLARHA
>sp|Z_LYCVT|RING finger protein Z|Lymphocytic choriomeningitis virus (strain
Query: 2 HRRYLARH 9
H YL RH
Sbjct: 46 HDHYLCRH 53
>sp|Z_LYCVA|RING finger protein Z|Lymphocytic choriomeningitis virus (strain
Query: 2 HRRYLARH 9
H YL RH
Sbjct: 46 HDHYLCRH 53
>sp|PRO_ADE17|PROTEASE adenovirus D serotype 17
Query: 4 RYLARHA 10
R+LARH+
Sbjct: 177 RFLARHS 183
>sp|PRO_ADE09|PROTEASE adenovirus D serotype 9
Query: 4 RYLARHA 10
R+LARH+
Sbjct: 177 RFLARHS 183
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 RRYLARH 9
RR++A H
Sbjct: 389 RRFIAHH 395
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 HRRYLAR 8
+R+YLAR
Sbjct: 1651 NRKYLAR 1657
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 HRRYLAR 8
+R+YLAR
Sbjct: 1651 NRKYLAR 1657
>sp|Z_LYCVP|RING finger protein Z|Lymphocytic choriomeningitis virus (strain
Query: 2 HRRYLARH 9
H YL RH
Sbjct: 25 HDHYLCRH 32
>sp|US25_HCMVA|UNCHARACTERIZED protein US25|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VHRRYLARH 9
VH+R+ RH
Sbjct: 88 VHQRFPLRH 96
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 VHRRYLARHA 10
V R+LA HA
Sbjct: 867 VVNRHLATHA 876
>sp|TEG3_HHV2H|TEGUMENT protein UL14|Human herpesvirus 2 (strain HG52)
Query: 1 VHRRYL 6
HRRYL
Sbjct: 93 AHRRYL 98
>sp|TEG3_HHV11|TEGUMENT protein UL14|Human herpesvirus 1 (strain 17)
Query: 1 VHRRYL 6
HRRYL
Sbjct: 93 AHRRYL 98
37|SequenceR|190|181|LVIGLVHRRY
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 LVIGLVHRRY 10
L++GL+ ++Y
Sbjct: 376 LLVGLIFKKY 385
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 LVIGLVHRRY 10
L+IGL+ ++Y
Sbjct: 376 LLIGLLFKKY 385
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 3 IGLVHR 8
IG+VHR
Sbjct: 47 IGVVHR 52
>sp|F13_MCV2|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 2
Query: 1 LVIGLVHR 8
L++GL HR
Sbjct: 269 LLVGLWHR 276
>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEERRY 704
>sp|F13_MCV1|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 1
Query: 1 LVIGLVHR 8
L++GL HR
Sbjct: 269 LLVGLWHR 276
>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGREDRRY 704
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LVIGLVHRRY 10
+V+ VH RY
Sbjct: 83 VVLWCVHNRY 92
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 LVIGLVHRRY 10
+V+ VH RY
Sbjct: 83 VVLWCVHNRY 92
>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGREDRRY 704
>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGREDRRY 704
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|M2_I07A0|MATRIX protein 2|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 VIGLVH 7
+IG+VH
Sbjct: 29 IIGIVH 34
>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I01A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 359 LILGKEDRRY 368
>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
>sp|M2_I96A3|MATRIX protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 VIGLVH 7
+IG+VH
Sbjct: 32 IIGIVH 37
>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 1 LVIGLVHRRY 10
L++G RRY
Sbjct: 695 LILGKEDRRY 704
38|SequenceR|195|186|LAPGQLVIGL
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1893 LSPGALVVGV 1902
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1888 LSPGALVVGV 1897
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1887 LSPGALVVGV 1896
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1887 LSPGALVVGV 1896
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1895 LSPGALVVGV 1904
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1891 LSPGALVVGV 1900
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1887 LSPGALVVGV 1896
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1887 LSPGALVVGV 1896
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1889 LSPGALVVGV 1898
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1887 LSPGALVVGV 1896
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1885 LSPGALVVGV 1894
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1892 LSPGALVVGV 1901
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1887 LSPGALVVGV 1896
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1893 LSPGALVVGV 1902
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1887 LSPGALVVGV 1896
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1887 LSPGALVVGV 1896
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1892 LSPGALVVGV 1901
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1891 LSPGALVVGV 1900
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1887 LSPGALVVGV 1896
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1891 LSPGALVVGV 1900
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1891 LSPGALVVGV 1900
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1887 LSPGALVVGV 1896
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1892 LSPGALVVGV 1901
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1891 LSPGALVVGV 1900
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1887 LSPGALVVGV 1896
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1891 LSPGALVVGV 1900
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 LAPGQLVIGL 10
L+PG LV+G+
Sbjct: 1891 LSPGALVVGV 1900
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 LAPGQLVIGL 10
L PG LV+G+
Sbjct: 1888 LCPGALVVGV 1897
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 LAPGQLVIGL 10
L PG LV+G+
Sbjct: 1888 LCPGALVVGV 1897
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 LAPGQLVIGL 10
LAPG ++G+
Sbjct: 1298 LAPGLRIVGI 1307
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 3 PGQLVIGL 10
PG L IGL
Sbjct: 368 PGTLKIGL 375
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 LAPGQLVIGL 10
L P Q ++GL
Sbjct: 1924 LTPEQAILGL 1933
>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P
Query: 5 QLVIGL 10
QLVIGL
Sbjct: 525 QLVIGL 530
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 LAPGQLVI 8
L+PG LV+
Sbjct: 1887 LSPGALVV 1894
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 4 GQLVIG 9
GQLV+G
Sbjct: 656 GQLVLG 661
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 4 GQLVIG 9
GQLV+G
Sbjct: 656 GQLVLG 661
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 PGQLVIGL 10
PG VIGL
Sbjct: 245 PGFTVIGL 252
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 PGQLVIGL 10
PG VIGL
Sbjct: 245 PGFTVIGL 252
39|SequenceR|200|191|AAAFCLAPGQ
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 4 FCLAPG 9
FCL+PG
Sbjct: 888 FCLSPG 893
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 4 FCLAPG 9
+CL+PG
Sbjct: 888 YCLSPG 893
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 4 FCLAPG 9
+CL+PG
Sbjct: 888 YCLSPG 893
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 AFCLAP 8
A CLAP
Sbjct: 273 ALCLAP 278
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 AAFCLAPG 9
AA+CLA G
Sbjct: 1675 AAYCLATG 1682
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 AAAFCLAPG 9
+A CLAP
Sbjct: 270 SALLCLAPA 278
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 FCLAPG 9
FC PG
Sbjct: 378 FCFVPG 383
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 FCLAPG 9
FC PG
Sbjct: 378 FCFVPG 383
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 FCLAPG 9
FC PG
Sbjct: 378 FCFVPG 383
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 FCLAPG 9
FC PG
Sbjct: 378 FCFVPG 383
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 FCLAPG 9
FC PG
Sbjct: 378 FCFVPG 383
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 FCLAPG 9
FC PG
Sbjct: 378 FCFVPG 383
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 FCLAPG 9
FC PG
Sbjct: 378 FCFVPG 383
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 FCLAPG 9
FC PG
Sbjct: 378 FCFVPG 383
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 FCLAPG 9
FC PG
Sbjct: 357 FCFVPG 362
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 FCLAPG 9
FC PG
Sbjct: 378 FCFVPG 383
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 FCLAPG 9
FC PG
Sbjct: 378 FCFVPG 383
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 FCLAPG 9
FC PG
Sbjct: 378 FCFVPG 383
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 AFCLAP 8
A CLAP
Sbjct: 273 ALCLAP 278
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 AFCLAPG 9
A CL PG
Sbjct: 1538 AVCLPPG 1544
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 5 CLAPGQ 10
CL PG+
Sbjct: 1777 CLEPGE 1782
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 5 CLAPGQ 10
CL PG+
Sbjct: 1777 CLEPGE 1782
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 5 CLAPGQ 10
CL PG+
Sbjct: 1777 CLEPGE 1782
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 AAFCLAPG 9
AAF + PG
Sbjct: 1208 AAFSIRPG 1215
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 AAFCLAPG 9
AAF + PG
Sbjct: 1208 AAFSIRPG 1215
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 AAFCLAPG 9
AAF + PG
Sbjct: 1208 AAFSIRPG 1215
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 AAFCLAPG 9
AAF + PG
Sbjct: 1208 AAFSIRPG 1215
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 AAFCLAPG 9
AA+CL+ G
Sbjct: 1671 AAYCLSTG 1678
Query: 1 AAAFCLA 7
AAAFC A
Sbjct: 268 AAAFCSA 274
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 AAFCLAPG 9
AA+CL+ G
Sbjct: 1671 AAYCLSTG 1678
Query: 1 AAAFCLA 7
AAAFC A
Sbjct: 268 AAAFCSA 274
>sp|LF3_EBVG|UNCHARACTERIZED protein LF3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 CLAPG 9
CLAPG
Sbjct: 9 CLAPG 13
>sp|LF3_EBVB9|UNCHARACTERIZED protein LF3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 CLAPG 9
CLAPG
Sbjct: 9 CLAPG 13
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 AAFCLAPG 9
AA+CL+ G
Sbjct: 1671 AAYCLSTG 1678
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 AAFCLAPG 9
AA+CL+ G
Sbjct: 1671 AAYCLSTG 1678
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 AAFCLAPG 9
AA+CL+ G
Sbjct: 1671 AAYCLSTG 1678
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 AAFCLAPG 9
AA+CL+ G
Sbjct: 1671 AAYCLSVG 1678
40|SequenceR|205|196|FLSFIAAAFC
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 FLSFIAAAFC 10
F+ F AA+C
Sbjct: 772 FILFFVAAWC 781
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 1 FLSFIAA 7
F+SF+AA
Sbjct: 409 FISFLAA 415
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 2 LSFIAAAFC 10
LSF A FC
Sbjct: 167 LSFYARRFC 175
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LSFIAAAFC 10
LSF A FC
Sbjct: 167 LSFYARRFC 175
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 1 FLSFIAA 7
F+SF+AA
Sbjct: 447 FVSFLAA 453
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 1 FLSFIAA 7
F+SF+AA
Sbjct: 447 FVSFLAA 453
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 1 FLSFIAA 7
F+SF+AA
Sbjct: 447 FVSFLAA 453
>sp|UL24_HHV11|PROTEIN UL24|Human herpesvirus 1 (strain 17)
Query: 2 LSFIAAAFC 10
L IAA FC
Sbjct: 247 LKRIAALFC 255
>sp|UL24_HHV2H|PROTEIN UL24|Human herpesvirus 2 (strain HG52)
Query: 2 LSFIAAAFC 10
L IAA FC
Sbjct: 259 LQKIAALFC 267
41|SequenceR|210|201|SLPVFFLSFI
>sp|IL1BP_CWPXB|INTERLEUKIN-1-BINDING protein|Cowpox virus (strain Brighton Red)
Query: 2 LPVFFLS 8
LP+FF S
Sbjct: 9 LPIFFYS 15
>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)
Query: 2 LPVFFLS 8
LPV FLS
Sbjct: 4 LPVIFLS 10
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 3 PVFFLSF 9
PV++L+F
Sbjct: 58 PVYYLTF 64
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 SLPVFFLSFI 10
++P F L+F+
Sbjct: 3689 TIPKFLLAFL 3698
42|SequenceR|215|206|VMLLYSLPVF
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 3 LLYSLPVF 10
LLY +P F
Sbjct: 345 LLYQMPFF 352
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 4 LYSLPVF 10
LY LP F
Sbjct: 446 LYGLPAF 452
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 LYSLPVF 10
LY LP F
Sbjct: 447 LYGLPAF 453
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 LYSLPVF 10
LY LP F
Sbjct: 446 LYGLPAF 452
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 3 LLYSLP 8
LLYS+P
Sbjct: 378 LLYSIP 383
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 3 LLYSLP 8
LLYS+P
Sbjct: 378 LLYSIP 383
43|SequenceR|220|211|LLIVTVMLLY
>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)
Query: 1 LLIVTVMLLY 10
++I+ V+LLY
Sbjct: 403 VIIIVVLLLY 412
>sp|UL33_HHV6U|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 6A (strain
Query: 1 LLIVTVMLLY 10
+++VT M+LY
Sbjct: 47 IIVVTTMILY 56
44|SequenceR|225|216|KSVYPLLIVT
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 1 KSVYPLLIVT 10
+S YP+L VT
Sbjct: 174 ESTYPVLNVT 183
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 1 KSVYPLLIVT 10
+S YP+L VT
Sbjct: 174 ESTYPVLNVT 183
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 1 KSVYPLLIVT 10
+S YP+L VT
Sbjct: 174 ESTYPVLNVT 183
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 1 KSVYPLLIVT 10
+S YP+L VT
Sbjct: 174 ESTYPVLNVT 183
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 1 KSVYPLLIVT 10
+S YP+L VT
Sbjct: 174 ESTYPVLNVT 183
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 2 SVYPLLIVT 10
S YP+L VT
Sbjct: 159 STYPVLNVT 167
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 2 SVYPLLIVT 10
S YP+L VT
Sbjct: 159 STYPVLNVT 167
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 2 SVYPLLIVT 10
S YP+L VT
Sbjct: 159 STYPVLNVT 167
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 2 SVYPLLIVT 10
S YP+L VT
Sbjct: 175 STYPVLNVT 183
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 2 SVYPLLIVT 10
S YP+L VT
Sbjct: 175 STYPVLNVT 183
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 2 SVYPLLIVT 10
S YP+L VT
Sbjct: 175 STYPVLNVT 183
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 2 SVYPLLIVT 10
S YP+L VT
Sbjct: 175 STYPVLNVT 183
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 SVYPLLIVT 10
S YP+L VT
Sbjct: 175 STYPVLNVT 183
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 2 SVYPLLIVT 10
S YP+L VT
Sbjct: 175 STYPVLNVT 183
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 2 SVYPLLIVT 10
S YP+L VT
Sbjct: 175 SAYPVLNVT 183
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 2 SVYPLLIVT 10
S YP+L VT
Sbjct: 175 SAYPVLNVT 183
>sp|HEMA_I70A0|HEMAGGLUTININ A virus (strain A/Qu/7/1970
Query: 2 SVYPLLIVT 10
S YP+L VT
Sbjct: 159 STYPVLNVT 167
>sp|HEMA_I69A0|HEMAGGLUTININ A virus (strain A/England/878/1969
Query: 2 SVYPLLIVT 10
S YP+L VT
Sbjct: 159 STYPVLNVT 167
>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 SVYPLLIVT 10
S+YP +VT
Sbjct: 475 SLYPATVVT 483
>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 SVYPLLIVT 10
S+YP +VT
Sbjct: 475 SLYPATVVT 483
45|SequenceR|230|221|CWGTVKSVYP
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 CWGTVKSVY 9
CW T++SVY
Sbjct: 185 CWCTLESVY 193
>sp|PG043_MONPV|MONOGLYCERIDE lipase homolog|Monkeypox virus (MPXV)
Query: 4 TVKSVYP 10
T+KS YP
Sbjct: 90 TIKSTYP 96
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 WGTVKSVYP 10
W +SV+P
Sbjct: 233 WSVTESVFP 241
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 WGTVKSVYP 10
W +SV+P
Sbjct: 232 WSVTESVFP 240
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 WGTVKSVYP 10
WG + ++P
Sbjct: 269 WGLIDPLFP 277
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 CWGTVKSVY 9
CW T SVY
Sbjct: 190 CWCTKSSVY 198
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 CWGTVKSVY 9
CW + ++Y
Sbjct: 259 CWWLLNAIY 267
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CWGTVKSVY 9
CW + ++Y
Sbjct: 259 CWWLLNAIY 267
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 WGTVK 6
WGT+K
Sbjct: 69 WGTIK 73
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 WGTVK 6
WGT+K
Sbjct: 69 WGTIK 73
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 WGTVK 6
WGT+K
Sbjct: 69 WGTIK 73
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 WGTVK 6
WGT+K
Sbjct: 69 WGTIK 73
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 WGTVK 6
WGT+K
Sbjct: 69 WGTIK 73
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 WGTVK 6
WGT+K
Sbjct: 69 WGTIK 73
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 WGTVK 6
WGT+K
Sbjct: 69 WGTIK 73
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 CWGTVKSVY 9
CW T +VY
Sbjct: 190 CWCTKLAVY 198
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CWGTVKSVY 9
CW +S+Y
Sbjct: 553 CWLGNRSIY 561
>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)
Query: 3 GTVKSVYP 10
GT K+ YP
Sbjct: 419 GTTKAGYP 426
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 WGTVK 6
WGT+K
Sbjct: 69 WGTIK 73
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 3 GTVKSVYP 10
GT K+ YP
Sbjct: 550 GTTKAGYP 557
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 3 GTVKSVYP 10
GT K+ YP
Sbjct: 551 GTTKAGYP 558
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 3 GTVKSVYP 10
GT K+ YP
Sbjct: 551 GTTKAGYP 558
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 GTVKSVYP 10
GT K+ YP
Sbjct: 551 GTTKAGYP 558
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 GTVKSVYP 10
GT K+ YP
Sbjct: 551 GTTKAGYP 558
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 GTVKSVYP 10
GT K+ YP
Sbjct: 551 GTTKAGYP 558
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 3 GTVKSVYP 10
GT K+ YP
Sbjct: 549 GTTKAGYP 556
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 GTVKSVYP 10
GT K+ YP
Sbjct: 551 GTTKAGYP 558
46|SequenceR|235|226|LLRDRCWGTV
>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LLRDRCWG 8
L+ RCWG
Sbjct: 503 LIGQRCWG 510
>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LLRDRCWG 8
L+ RCWG
Sbjct: 503 LIGQRCWG 510
>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)
Query: 1 LLRDRCWG 8
L+ RCWG
Sbjct: 502 LIGQRCWG 509
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 1 LLRDRCWGT 9
LLR R W T
Sbjct: 154 LLRSRAWVT 162
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 1 LLRDRCWGT 9
LLR R W T
Sbjct: 154 LLRSRAWVT 162
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 1 LLRDRCWGT 9
LLR R W T
Sbjct: 154 LLRSRAWVT 162
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 6 CWGTV 10
CWGT+
Sbjct: 602 CWGTL 606
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LRDRC 6
LRDRC
Sbjct: 169 LRDRC 173
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LRDRC 6
LRDRC
Sbjct: 169 LRDRC 173
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 LRDRC 6
LRDRC
Sbjct: 169 LRDRC 173
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 LRDRCWGTV 10
RD WG++
Sbjct: 215 FRDSIWGSL 223
Query: 1 LLRDRCWG 8
LLR+ WG
Sbjct: 1101 LLREISWG 1108
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 1 LLRDRCWGT 9
LLR R W T
Sbjct: 154 LLRSRAWVT 162
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 LLRDRCWG 8
LLR+ WG
Sbjct: 1100 LLREISWG 1107
Query: 2 LRDRCWGTV 10
RD WG++
Sbjct: 214 FRDPIWGSL 222
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 LLRDRCWG 8
LLR+ WG
Sbjct: 1100 LLREISWG 1107
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 LLRDRCWG 8
LLR+ WG
Sbjct: 1100 LLREISWG 1107
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 LLRDRCWG 8
LLR+ WG
Sbjct: 1100 LLREISWG 1107
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 LLRDRCWG 8
LLR+ WG
Sbjct: 1100 LLREISWG 1107
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 LLRDRCWG 8
LLR+ WG
Sbjct: 1100 LLREISWG 1107
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 LLRDRCWG 8
LLR+ WG
Sbjct: 1100 LLREISWG 1107
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 LLRDRCWGT 9
++RD C GT
Sbjct: 1052 VVRDHCPGT 1060
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 LLRDRCWG 8
LLR+ WG
Sbjct: 1100 LLREISWG 1107
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 LLRDRCWG 8
LLR+ WG
Sbjct: 1100 LLREISWG 1107
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 LLRDRCWG 8
LLR+ WG
Sbjct: 1100 LLREISWG 1107
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 LLRDRCWG 8
LLR+ WG
Sbjct: 1101 LLREISWG 1108
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 LLRDRCWGT 9
LLR WGT
Sbjct: 565 LLRLTVWGT 573
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 LLRDRCWGT 9
LLR WGT
Sbjct: 562 LLRLTVWGT 570
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 LLRDRCWGT 9
LLR WGT
Sbjct: 566 LLRLTVWGT 574
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 LLRDRCWGT 9
LLR WGT
Sbjct: 564 LLRLTVWGT 572
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 LLRDRCWGT 9
LLR WGT
Sbjct: 567 LLRLTVWGT 575
47|SequenceR|240|231|PERHGLLRDR
>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40
Query: 1 PERHGLLR 8
P R GLLR
Sbjct: 259 PRRQGLLR 266
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PERHGLLRD 9
PERH L D
Sbjct: 587 PERHNLSFD 595
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PERHGLLRD 9
PERH L D
Sbjct: 587 PERHNLSFD 595
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PERHGLLRD 9
PERH L D
Sbjct: 587 PERHNLSFD 595
>sp|VE2_HPV22|REGULATORY protein E2|Human papillomavirus 22
Query: 3 RHGLLR 8
RHG+LR
Sbjct: 48 RHGILR 53
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PERHGLLRD 9
PERH L D
Sbjct: 587 PERHNLSFD 595
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 PERHGL 6
PE HGL
Sbjct: 971 PETHGL 976
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 2 ERHGLLRDR 10
ER+ LRD+
Sbjct: 311 ERYSTLRDQ 319
>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5
Query: 3 RHGLLRDR 10
RHGL R+R
Sbjct: 122 RHGLNRER 129
>sp|PKG3_ADE02|PACKAGING protein 3|Human adenovirus C serotype 2
Query: 3 RHGLLRDR 10
RHGL R+R
Sbjct: 122 RHGLNRER 129
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PERHGLLRD 9
P RH L+D
Sbjct: 295 PRRHVTLQD 303
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 1 PERHGLLRD 9
P RH L+D
Sbjct: 295 PRRHETLQD 303
>sp|DUT_EBVG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 1 PERHGLL 7
PE HGL+
Sbjct: 53 PEGHGLM 59
>sp|DUT_EBVB9|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 1 PERHGLL 7
PE HGL+
Sbjct: 53 PEGHGLM 59
>sp|DUT_EBVA8|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 1 PERHGLL 7
PE HGL+
Sbjct: 53 PEGHGLM 59
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 HGLLRD 9
HG LRD
Sbjct: 961 HGSLRD 966
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 PERHGL 6
PE HG+
Sbjct: 968 PETHGI 973
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 PERHGL 6
PE HG+
Sbjct: 968 PETHGI 973
>sp|LRP1_HHV1F|LATENCY-RELATED protein 1|Human herpesvirus 1 (strain F)
Query: 1 PERHGL 6
P RHGL
Sbjct: 123 PPRHGL 128
48|SequenceR|245|236|VPHASPERHG
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PHASPERH 9
P+A+PE H
Sbjct: 312 PNAAPETH 319
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 2 PHASPERHG 10
P SPE+HG
Sbjct: 113 PSCSPEQHG 121
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 2 PHASPERHG 10
P SPE+HG
Sbjct: 113 PSCSPEQHG 121
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 3 HASPERHG 10
H S E+HG
Sbjct: 392 HKSGEKHG 399
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 3 HASPERHG 10
HA PE G
Sbjct: 683 HAPPETKG 690
>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P
Query: 1 VPHASPE 7
VP ASPE
Sbjct: 543 VPEASPE 549
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VPHASPERH 9
VP+ P RH
Sbjct: 314 VPYNKPRRH 322
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VPHASPERH 9
VP+ P RH
Sbjct: 314 VPYNKPRRH 322
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 5 SPERH 9
SPERH
Sbjct: 294 SPERH 298
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 PHASPERHG 10
PH++ R+G
Sbjct: 2536 PHSAKSRYG 2544
Query: 5 SPERH 9
SPERH
Sbjct: 294 SPERH 298
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 PHASPERHG 10
PH++ R+G
Sbjct: 2536 PHSAKSRYG 2544
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VPHASPERHG 10
+P A ER G
Sbjct: 471 LPEAGAERQG 480
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 VPHASPE 7
PH SPE
Sbjct: 2249 TPHVSPE 2255
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 1 VPHASP 6
+PH SP
Sbjct: 333 LPHGSP 338
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 1 VPHASP 6
+PH SP
Sbjct: 333 LPHGSP 338
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 2 PHASPERH 9
PH SP+ +
Sbjct: 614 PHLSPDDY 621
>sp|PKG3_ADE12|PACKAGING protein 3|Human adenovirus A serotype 12
Query: 5 SPERH 9
SPERH
Sbjct: 52 SPERH 56
49|SequenceR|250|241|FSFVEVPHAS
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 SFVEVPHAS 10
+FV + HAS
Sbjct: 2655 NFVNIAHAS 2663
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 SFVEVPHAS 10
+FV + HAS
Sbjct: 2685 NFVNIAHAS 2693
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 SFVEVPHAS 10
+FV + HAS
Sbjct: 2635 NFVNIAHAS 2643
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 SFVEVPHAS 10
+FV + HAS
Sbjct: 2655 NFVNIAHAS 2663
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 SFVEVPHAS 10
+FV + HAS
Sbjct: 2685 NFVNIAHAS 2693
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 3 FVEVPHA 9
F E+PHA
Sbjct: 169 FRELPHA 175
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 SFVEVPHAS 10
+FV + HAS
Sbjct: 2635 NFVNIAHAS 2643
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 FVEVPH 8
FV+ PH
Sbjct: 1833 FVDAPH 1838
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 6 VPHAS 10
VPHAS
Sbjct: 206 VPHAS 210
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 6 VPHAS 10
VPHAS
Sbjct: 206 VPHAS 210
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 1 FSFVEVPHA 9
F+FV HA
Sbjct: 391 FAFVNAAHA 399
50|SequenceR|255|246|PEHLDFSFVE
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PEHLDF 6
PE++DF
Sbjct: 20 PENMDF 25
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PEHLDF 6
PE++DF
Sbjct: 20 PENMDF 25
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 PEHLDF 6
PE++DF
Sbjct: 20 PENMDF 25
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 1 PEHLDF 6
PE++DF
Sbjct: 20 PENMDF 25
>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)
Query: 1 PEHLDF 6
PE++DF
Sbjct: 20 PENMDF 25
>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate
Query: 1 PEHLDF 6
PE++DF
Sbjct: 20 PENMDF 25
>sp|PG069_VACCC|PROTEIN OPG069|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PEHLDF 6
PE++DF
Sbjct: 45 PEYIDF 50
>sp|PG069_MONPV|PROTEIN OPG069|Monkeypox virus (MPXV)
Query: 1 PEHLDF 6
PE++DF
Sbjct: 45 PEYIDF 50
51|SequenceR|260|251|REKSLPEHLD
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 REKSLPEHL 9
RE+ +PE L
Sbjct: 48 REEEMPEEL 56
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 REKSLPEHL 9
RE+ +PE L
Sbjct: 48 REEEMPEEL 56
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 5 LPEHL 9
LPEHL
Sbjct: 2134 LPEHL 2138
>sp|HEMA_I79A4|HEMAGGLUTININ A virus (strain A/Kiev/59/1979
Query: 1 REKSLPEH 8
+E+S P+H
Sbjct: 136 KERSWPKH 143
>sp|HEMA_I77AB|HEMAGGLUTININ A virus (strain A/USSR/90/1977
Query: 1 REKSLPEH 8
+E+S P+H
Sbjct: 136 KERSWPKH 143
>sp|HEMA_I77AA|HEMAGGLUTININ A virus (strain A/Brazil/11/1978
Query: 1 REKSLPEH 8
+E+S P+H
Sbjct: 136 KERSWPKH 143
>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954
Query: 1 REKSLPEH 8
+E+S P+H
Sbjct: 136 KERSWPKH 143
>sp|HEMA_I51A0|HEMAGGLUTININ A virus (strain A/USA:Albany/12/1951
Query: 1 REKSLPEH 8
+E+S P+H
Sbjct: 136 KERSWPKH 143
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 REKSLPE 7
REK LP+
Sbjct: 1703 REKGLPQ 1709
>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 REKSLPEHLD 10
R ++P+H+D
Sbjct: 221 RRLTIPDHID 230
>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 REKSLPEHLD 10
R ++P+H+D
Sbjct: 221 RRLTIPDHID 230
>sp|PHOSP_ISFV|PHOSPHOPROTEIN virus (ISFV)
Query: 3 KSLPEHL 9
KS+PEH+
Sbjct: 171 KSIPEHI 177
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 REKSLPEH 8
++KSLP++
Sbjct: 878 KDKSLPDY 885
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 REKSLPEH 8
++KSLP++
Sbjct: 878 KDKSLPDY 885
>sp|KITH_VZVO|THYMIDINE kinase|Varicella-zoster virus (strain Oka vaccine)
Query: 4 SLPEHL 9
SLP HL
Sbjct: 176 SLPSHL 181
>sp|KITH_VZVD|THYMIDINE kinase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 SLPEHL 9
SLP HL
Sbjct: 176 SLPSHL 181
>sp|NEC1_HHV2H|NUCLEAR egress protein 1|Human herpesvirus 2 (strain HG52)
Query: 3 KSLPEH 8
KSLP H
Sbjct: 41 KSLPSH 46
52|SequenceR|265|256|SFAEVREKSL
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 SFAEVREK 8
+FAE+R K
Sbjct: 358 AFAEIRNK 365
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 SFAEVREKS 9
+FA V+E+S
Sbjct: 1552 AFARVQERS 1560
>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)
Query: 2 FAEVREKSL 10
F E++EKS+
Sbjct: 358 FTELKEKSV 366
>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)
Query: 2 FAEVREKSL 10
F E++EKS+
Sbjct: 358 FTELKEKSV 366
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 FAEVREKSL 10
F E++EKS+
Sbjct: 358 FTELKEKSV 366
53|SequenceR|270|261|AYVGDSFAEV
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 YVGDSF 7
YVGD F
Sbjct: 706 YVGDPF 711
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 YVGDSF 7
YVGD F
Sbjct: 706 YVGDPF 711
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 YVGDSF 7
YVGD F
Sbjct: 711 YVGDPF 716
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 YVGDSF 7
YVGD F
Sbjct: 712 YVGDPF 717
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 YVGDSF 7
YVGD F
Sbjct: 712 YVGDPF 717
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 YVGDSF 7
YVGD F
Sbjct: 712 YVGDPF 717
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 2 YVGDSF 7
Y+GDS+
Sbjct: 422 YIGDSY 427
>sp|HEMA_HUTV|HEMAGGLUTININ-ESTERASE torovirus (HuTV)
Query: 1 AYVGDSF 7
+YV DSF
Sbjct: 219 SYVSDSF 225
54|SequenceR|275|266|LTAVIAYVGD
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 LTAVIAYVGD 10
+T I+Y+GD
Sbjct: 415 ITPFISYIGD 424
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 LTAVIAYVG 9
L VIAY G
Sbjct: 118 LAVVIAYAG 126
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 3 AVIAYVGD 10
AVI Y GD
Sbjct: 217 AVITYEGD 224
>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 2 TAVIAYVGD 10
T I YVGD
Sbjct: 319 TTDITYVGD 327
>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 TAVIAYVGD 10
T I YVGD
Sbjct: 319 TTDITYVGD 327
>sp|GP350_EBVB9|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 TAVIAYVGD 10
T I YVGD
Sbjct: 319 TTDITYVGD 327
>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 TAVIAYVGD 10
T I YVGD
Sbjct: 319 TTDITYVGD 327
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 LTAVIAYVG 9
L VIAY G
Sbjct: 118 LAVVIAYAG 126
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 1 LTAVIAYVGD 10
L I Y+GD
Sbjct: 416 LNPYICYIGD 425
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 AVIAYVGD 10
AV+ Y GD
Sbjct: 217 AVVTYEGD 224
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 AVIAYVGD 10
AV+ Y GD
Sbjct: 217 AVVTYEGD 224
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 3 AVIAYVGD 10
AV+ Y GD
Sbjct: 217 AVVTYEGD 224
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LTAVIAYVGD 10
+TAV Y+G+
Sbjct: 224 VTAVSGYLGE 233
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LTAVIAYVGD 10
+TAV Y+G+
Sbjct: 224 VTAVSGYLGE 233
55|SequenceR|280|271|IDLILLTAVI
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 LILLTAV 9
LILLTAV
Sbjct: 269 LILLTAV 275
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 DLILLTAVI 10
DLI +TAV+
Sbjct: 1071 DLITVTAVL 1079
>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P
Query: 1 IDLILLTAV 9
ID+IL TA+
Sbjct: 308 IDIILDTAI 316
>sp|YVKB_VACCC|UNCHARACTERIZED 9.0 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 IDLILLTA 8
I+LILLTA
Sbjct: 60 IELILLTA 67
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 DLILLTAVI 10
DLI +TA++
Sbjct: 1079 DLITVTAIL 1087
>sp|NCAP_TOSV|NUCLEOPROTEIN virus (Tos)
Query: 2 DLILLTAVI 10
DL+L +AV+
Sbjct: 233 DLVLASAVV 241
56|SequenceR|285|276|VNDECIDLIL
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 VNDECIDLI 9
+NDE IDL+
Sbjct: 638 LNDEVIDLV 646
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VNDECIDLI 9
+NDE IDL+
Sbjct: 638 LNDEVIDLV 646
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 4 ECIDLI 9
ECIDL+
Sbjct: 23 ECIDLL 28
>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 NDECIDLI 9
NDEC++ +
Sbjct: 488 NDECMESV 495
>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006
Query: 2 NDECIDLI 9
NDEC++ +
Sbjct: 488 NDECMESV 495
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VNDECI 6
+NDEC+
Sbjct: 582 LNDECL 587
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 1 VNDECI 6
+NDEC+
Sbjct: 582 LNDECL 587
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 1 VNDECI 6
+NDEC+
Sbjct: 582 LNDECL 587
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 CIDLIL 10
C+DLI+
Sbjct: 1383 CVDLIM 1388
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 CIDLIL 10
C+DLI+
Sbjct: 1383 CVDLIM 1388
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 CIDLIL 10
C+DLI+
Sbjct: 1383 CVDLIM 1388
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 CIDLIL 10
C+DLI+
Sbjct: 1219 CVDLIM 1224
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 CIDLIL 10
C+DLI+
Sbjct: 1383 CVDLIM 1388
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 CIDLIL 10
C+DLI+
Sbjct: 1383 CVDLIM 1388
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 CIDLIL 10
C+DLI+
Sbjct: 1383 CVDLIM 1388
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 CIDLIL 10
C+DLI+
Sbjct: 1383 CVDLIM 1388
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 VNDECIDLI 9
V ++CID++
Sbjct: 885 VPEQCIDIL 893
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VNDECIDLI 9
V ++CID++
Sbjct: 885 VPEQCIDIL 893
>sp|VL2_HPV41|MINOR capsid protein L2|Human papillomavirus type 41
Query: 2 NDECIDLI 9
NDE +D++
Sbjct: 460 NDEVVDIM 467
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 VNDECIDLIL 10
VN EC D +
Sbjct: 492 VNQECWDSVF 501
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 VNDECIDLIL 10
VN EC D +
Sbjct: 492 VNQECWDSVF 501
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 VNDECIDLIL 10
VN EC D +
Sbjct: 492 VNQECWDSVF 501
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 VNDECIDLIL 10
VN EC D +
Sbjct: 492 VNQECWDSVF 501
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 4 ECIDLI 9
EC+DL+
Sbjct: 23 ECLDLL 28
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 4 ECIDLI 9
EC+DL+
Sbjct: 23 ECLDLL 28
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 4 ECIDLI 9
EC+DL+
Sbjct: 23 ECLDLL 28
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 4 ECIDLI 9
EC+DL+
Sbjct: 23 ECLDLL 28
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 VNDECIDLI 9
V+DE ID++
Sbjct: 175 VHDEFIDIL 183
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 VNDECIDLI 9
V+DE ID++
Sbjct: 175 VHDEFIDIL 183
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 CIDLIL 10
C+DL++
Sbjct: 1383 CVDLVM 1388
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 CIDLIL 10
C+DL++
Sbjct: 1383 CVDLVM 1388
57|SequenceR|290|281|DKPDPVNDEC
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 DKPDPVNDEC 10
+K PVND C
Sbjct: 86 EKASPVNDLC 95
>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 DKPDPVNDEC 10
+KP+P N C
Sbjct: 98 EKPNPENGTC 107
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 KPDPVN 7
KP+PVN
Sbjct: 1178 KPEPVN 1183
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 KPDPVN 7
KP+PVN
Sbjct: 1178 KPEPVN 1183
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 DKPDPVNDEC 10
+K +P ND C
Sbjct: 97 EKANPANDLC 106
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 DKPDPVNDEC 10
+K +P ND C
Sbjct: 97 EKANPANDLC 106
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 1 DKPDPVNDEC 10
+K +P ND C
Sbjct: 97 EKANPANDLC 106
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 DKPDPVNDEC 10
+K +P ND C
Sbjct: 97 EKANPANDLC 106
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 1 DKPDPVNDEC 10
+K +P ND C
Sbjct: 95 EKANPANDLC 104
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 DKPDPVNDEC 10
+K +P ND C
Sbjct: 97 EKANPANDLC 106
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 DKPDPVNDEC 10
+K +P ND C
Sbjct: 97 EKANPANDLC 106
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 DKPDPVNDEC 10
+K P ND C
Sbjct: 97 EKASPANDLC 106
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 DKPDPVNDEC 10
+K P ND C
Sbjct: 97 EKASPANDLC 106
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 DKPDPVNDEC 10
+K P ND C
Sbjct: 97 EKASPANDLC 106
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 1 DKPDPVNDEC 10
+K P ND C
Sbjct: 97 EKASPANDLC 106
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 DKPDPVNDEC 10
+K P ND C
Sbjct: 97 EKASPANDLC 106
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 DKPDPVNDEC 10
+K P ND C
Sbjct: 86 EKASPANDLC 95
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 DKPDPVNDEC 10
+K P ND C
Sbjct: 86 EKASPANDLC 95
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 DKPDPVNDEC 10
+K P ND C
Sbjct: 86 EKASPANDLC 95
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 DKPDPVNDEC 10
+K P ND C
Sbjct: 89 EKASPANDLC 98
>sp|VE7_HPV55|PROTEIN E7|Human papillomavirus type 55
Query: 1 DKPDPVNDEC 10
D PDPV C
Sbjct: 16 DPPDPVGLHC 25
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 DKPDPVNDE 9
++PDPV +
Sbjct: 406 EEPDPVKKD 414
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 DKPDPVNDE 9
D DP+ DE
Sbjct: 1694 DDWDPIEDE 1702
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 2 KPDPVND 8
K +P+ND
Sbjct: 1228 KSEPIND 1234
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 KPDPVND 8
K +P+ND
Sbjct: 1228 KSEPIND 1234
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 2 KPDPVND 8
K +P+ND
Sbjct: 1228 KSEPIND 1234
>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)
Query: 1 DKPDPVNDE 9
++PDPV +
Sbjct: 417 EEPDPVKKD 425
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 KPDPVND 8
K +P+ND
Sbjct: 1228 KSEPIND 1234
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 KPDPVND 8
K +P+ND
Sbjct: 1228 KSEPIND 1234
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 DKPDPVNDEC 10
D P P D C
Sbjct: 32 DLPTPTRDWC 41
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 DKPDPVNDEC 10
D P P D C
Sbjct: 32 DLPTPTRDWC 41
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 KPDPVNDE 9
KP+P N E
Sbjct: 112 KPEPKNPE 119
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 1 DKPDPVNDEC 10
D+ P++ EC
Sbjct: 124 DRHTPIHPEC 133
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 KPDPVND 8
+PD +ND
Sbjct: 7096 RPDQLND 7102
>sp|PHOSP_MUMPE|PHOSPHOPROTEIN virus (strain Enders) (MuV)
Query: 2 KPDPVND 8
KP PV D
Sbjct: 335 KPQPVKD 341
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 1 DKPDPVNDEC 10
++ P ND C
Sbjct: 93 ERASPANDLC 102
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 KPDPVND 8
+PD +ND
Sbjct: 7116 RPDQLND 7122
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 KPDPVND 8
+PD +ND
Sbjct: 7146 RPDQLND 7152
>sp|TRX2_HHV6U|TRIPLEX capsid protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PDPVNDE 9
PD VND+
Sbjct: 179 PDIVNDK 185
>sp|TRX2_HHV6Z|TRIPLEX capsid protein 2|Human herpesvirus 6B (strain Z29)
Query: 3 PDPVNDE 9
PD VND+
Sbjct: 179 PDIVNDK 185
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 3 PDPVND 8
PD +ND
Sbjct: 1462 PDAIND 1467
>sp|VE7_HPV44|PROTEIN E7|Human papillomavirus 44
Query: 3 PDPVNDEC 10
PDPV C
Sbjct: 18 PDPVGLHC 25
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 3 PDPVND 8
PDPV++
Sbjct: 1460 PDPVSE 1465
>sp|PHOSP_MUMPZ|PHOSPHOPROTEIN virus genotype N (strain
Query: 2 KPDPVND 8
KP PV D
Sbjct: 335 KPQPVKD 341
>sp|PHOSP_MUMPM|PHOSPHOPROTEIN virus genotype B (strain
Query: 2 KPDPVND 8
KP PV D
Sbjct: 335 KPQPVKD 341
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 PDPVND 8
PDPV++
Sbjct: 1460 PDPVSE 1465
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 DKPDPVN 7
+KPDP +
Sbjct: 997 EKPDPTD 1003
>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 KPDPVNDE 9
KP+P N E
Sbjct: 112 KPEPKNPE 119
>sp|PHOSP_MUMP1|PHOSPHOPROTEIN virus (strain SBL-1) (MuV)
Query: 2 KPDPVND 8
KP PV D
Sbjct: 334 KPQPVKD 340
>sp|MIR1_HHV8P|E3 ubiquitin-protein ligase MIR1|Human herpesvirus 8 type P
Query: 2 KPDPVNDEC 10
+P P + EC
Sbjct: 165 RPRPTSPEC 173
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 2 KPDPVNDE 9
+P+P N+E
Sbjct: 1179 RPNPRNEE 1186
58|SequenceR|295|286|FREKVDKPDP
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 FREKVDK--PDP 10
F+EKVD PDP
Sbjct: 2876 FKEKVDTRVPDP 2887
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 FREKVDK--PDP 10
F+EKVD PDP
Sbjct: 2876 FKEKVDTRVPDP 2887
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 FREKVDK--PDP 10
F+EKVD PDP
Sbjct: 2872 FKEKVDTRVPDP 2883
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 FREKVDK--PDP 10
F+EKVD PDP
Sbjct: 2875 FKEKVDTRAPDP 2886
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2855 FKEKVDTKAP 2864
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2885 FKEKVDTKAP 2894
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2882 FKEKVDTKAP 2891
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2886 FKEKVDTKAP 2895
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2877 FKEKVDTKAP 2886
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2881 FKEKVDTKAP 2890
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2877 FKEKVDTKAP 2886
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2886 FKEKVDTKAP 2895
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2885 FKEKVDTKAP 2894
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2864 FKEKVDTKAP 2873
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2884 FKEKVDTKAP 2893
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2884 FKEKVDTKAP 2893
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2884 FKEKVDTKAP 2893
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2884 FKEKVDTKAP 2893
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 FREKVDK--PDP 10
F+EKVD P+P
Sbjct: 2844 FKEKVDTRAPEP 2855
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2844 FKEKVDTRTP 2853
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2844 FKEKVDTRTP 2853
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2847 FKEKVDTRTP 2856
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2846 FKEKVDTRTP 2855
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2847 FKEKVDTRTP 2856
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2879 FKEKVDTKAP 2888
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2844 FKEKVDTRTP 2853
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2842 FKEKVDTRTP 2851
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2842 FKEKVDTRTP 2851
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2844 FKEKVDTRTP 2853
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2842 FKEKVDTRTP 2851
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2844 FKEKVDTRTP 2853
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2842 FKEKVDTRTP 2851
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 FREKVDKPDP 10
F+EKVD P
Sbjct: 2842 FKEKVDTRTP 2851
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 1 FREKVD 6
FREKVD
Sbjct: 554 FREKVD 559
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 FREKVD----KPDP 10
F+EKVD +P P
Sbjct: 2865 FKEKVDTKAQEPQP 2878
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 FREKVD----KPDP 10
F+EKVD +P P
Sbjct: 2868 FKEKVDTKAQEPQP 2881
Query: 5 VDKPDP 10
VDK DP
Sbjct: 865 VDKTDP 870
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 FREKVD----KPDP 10
F+EKVD +P P
Sbjct: 2867 FKEKVDTKAQEPQP 2880
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 FREKVD----KPDP 10
F+EKVD +P P
Sbjct: 2867 FKEKVDTKAQEPQP 2880
>sp|LEAD_ADE02|I-LEADER protein|Human adenovirus C serotype 2
Query: 2 REKVDKPDP 10
RE++D P P
Sbjct: 5 REELDLPPP 13
>sp|LEAD_ADE05|I-LEADER protein|Human adenovirus C serotype 5
Query: 2 REKVDKPDP 10
RE++D P P
Sbjct: 5 REELDLPPP 13
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 FREKVD 6
F+EKVD
Sbjct: 2863 FKEKVD 2868
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 FREKVD 6
F+EKVD
Sbjct: 2862 FKEKVD 2867
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 FREKVD 6
F+EKVD
Sbjct: 2863 FKEKVD 2868
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 FREKVD 6
F+EKVD
Sbjct: 2862 FKEKVD 2867
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 FREKVD 6
F+EKVD
Sbjct: 2862 FKEKVD 2867
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 FREKVD 6
F+EKVD
Sbjct: 2863 FKEKVD 2868
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 FREKVD 6
F+EKVD
Sbjct: 2862 FKEKVD 2867
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 FREKVD 6
F+EKVD
Sbjct: 2862 FKEKVD 2867
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 FREKVD 6
F+EKVD
Sbjct: 2862 FKEKVD 2867
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 FREKVD 6
F+EKVD
Sbjct: 2869 FKEKVD 2874
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 FREKVD 6
F+EKVD
Sbjct: 2869 FKEKVD 2874
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 FREKVD 6
F+EKVD
Sbjct: 2846 FKEKVD 2851
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 FREKVD 6
F+EKVD
Sbjct: 2846 FKEKVD 2851
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 FREKVD 6
F+EKVD
Sbjct: 2846 FKEKVD 2851
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 FREKVD 6
F+EKVD
Sbjct: 2843 FKEKVD 2848
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 FREKVD 6
F+EKVD
Sbjct: 2846 FKEKVD 2851
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 FREKVD 6
F+EKVD
Sbjct: 2846 FKEKVD 2851
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 FREKVD 6
F+EKVD
Sbjct: 2846 FKEKVD 2851
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 5 VDKPDP 10
VDK DP
Sbjct: 866 VDKADP 871
>sp|NEF_HV1ND|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 FREKVDKPDP 10
RE++ K DP
Sbjct: 16 IRERIRKTDP 25
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 3 EKVDKPDP 10
EK+D DP
Sbjct: 137 EKIDNNDP 144
>sp|A47_VARV|PROTEIN A47|Variola virus
Query: 4 KVDKPD 9
KVD PD
Sbjct: 55 KVDHPD 60
>sp|A47_VAR67|PROTEIN A47|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 KVDKPD 9
KVD PD
Sbjct: 55 KVDHPD 60
>sp|A47_VACCA|PROTEIN A47|Vaccinia virus (strain Ankara) (VACV)
Query: 4 KVDKPD 9
KVD PD
Sbjct: 50 KVDHPD 55
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FREKVDKPD 9
FRE+ PD
Sbjct: 242 FRERARLPD 250
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 FREKVDKPD 9
FRE+ PD
Sbjct: 242 FRERARLPD 250
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FREKVDKPD 9
FRE+ PD
Sbjct: 242 FRERARLPD 250
>sp|A47_VACCC|PROTEIN A47|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 KVDKPD 9
KVD PD
Sbjct: 55 KVDHPD 60
59|SequenceR|300|291|VLSGSFREKV
>sp|GP_PUUMB|ENVELOPE glycoprotein|Puumala virus (strain Berkel)
Query: 2 LSGSFREK 9
LSGSFR+K
Sbjct: 82 LSGSFRKK 89
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LSGSFREKV 10
+S SFREK+
Sbjct: 349 ISASFREKL 357
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 LSGSFREK 9
L+GSFR+K
Sbjct: 897 LNGSFRKK 904
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 2 LSGSFREK 9
L+GSFR+K
Sbjct: 897 LNGSFRKK 904
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 2 LSGSFREK 9
L+GSFR+K
Sbjct: 897 LNGSFRKK 904
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 LSGSFREK 9
L+GSFR+K
Sbjct: 897 LNGSFRKK 904
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 1 VLSGSFREKV 10
+L+GS++EK+
Sbjct: 118 MLTGSYKEKL 127
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 LSGSFREKV 10
++G F+EKV
Sbjct: 1725 IAGQFKEKV 1733
>sp|A47_VACCA|PROTEIN A47|Vaccinia virus (strain Ankara) (VACV)
Query: 4 GSFREK 9
GSFREK
Sbjct: 28 GSFREK 33
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LSGSFRE 8
+SG+FRE
Sbjct: 790 VSGAFRE 796
>sp|CAP8_ADE05|PRE-HEXON-LINKING protein VIII|Human adenovirus C serotype 5
Query: 2 LSGSFREKV 10
L+G FR +V
Sbjct: 108 LAGGFRHRV 116
>sp|CAP8_ADE02|PRE-HEXON-LINKING protein VIII|Human adenovirus C serotype 2
Query: 2 LSGSFREKV 10
L+G FR +V
Sbjct: 108 LAGGFRHRV 116
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 SGSFREK 9
+GSFR+K
Sbjct: 893 AGSFRKK 899
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 4 GSFREK 9
GSFR+K
Sbjct: 890 GSFRKK 895
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 4 GSFREK 9
GSFR+K
Sbjct: 890 GSFRKK 895
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 4 GSFREK 9
GSFR+K
Sbjct: 889 GSFRKK 894
60|SequenceR|305|296|ASLAAVLSGS
***** No hits found ******
61|SequenceR|310|301|FRPGTASLAA
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 FRPGTA 6
F+PGT+
Sbjct: 1603 FKPGTS 1608
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 FRPGTA 6
F+PGT+
Sbjct: 1603 FKPGTS 1608
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 FRPGTA 6
F+PGT+
Sbjct: 1603 FKPGTS 1608
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 FRPGTA 6
F+PGT+
Sbjct: 1603 FKPGTS 1608
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 FRPGTA 6
F+PGT+
Sbjct: 1603 FKPGTS 1608
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 FRPGTA 6
F+PGT+
Sbjct: 1604 FKPGTS 1609
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 FRPGTA 6
F+PGT+
Sbjct: 1605 FKPGTS 1610
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 FRPGTA 6
F+PGT+
Sbjct: 1604 FKPGTS 1609
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 FRPGTA 6
F+PGT+
Sbjct: 1604 FKPGTS 1609
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 FRPGTA 6
F+PGT+
Sbjct: 1604 FKPGTS 1609
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 FRPGTA 6
F+PGT+
Sbjct: 1604 FKPGTS 1609
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 FRPGTA 6
F+PGT+
Sbjct: 1604 FKPGTS 1609
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 FRPGTA 6
F+PGT+
Sbjct: 1605 FKPGTS 1610
62|SequenceR|315|306|GFYALFRPGT
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 1 GFYALFRPG 9
G YA+ RPG
Sbjct: 600 GGYAMLRPG 608
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 FYALFRPGT 10
F+A F+P T
Sbjct: 184 FFAAFKPDT 192
>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 FYALFRPGT 10
F+A F+P T
Sbjct: 184 FFAAFKPDT 192
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 GFYALFRPG 9
G Y +F PG
Sbjct: 1512 GVYRIFSPG 1520
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 GFYALFRPG 9
G Y +F PG
Sbjct: 1512 GVYRIFSPG 1520
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 GFYALFRPG 9
G Y +F PG
Sbjct: 1512 GVYRIFSPG 1520
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 GFYALFRPG 9
G Y +F PG
Sbjct: 1512 GVYRIFSPG 1520
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 GFYALFRPG 9
G Y +F PG
Sbjct: 1512 GVYRIFSPG 1520
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 1 GFYALF 6
GFYAL+
Sbjct: 230 GFYALY 235
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 GFYALFRPGT 10
G +LF PG+
Sbjct: 398 GLVSLFTPGS 407
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GFYALFRPGT 10
G +LF PG+
Sbjct: 398 GITSLFSPGS 407
>sp|NS3_CVHNL|NON-STRUCTURAL protein 3|Human coronavirus NL63 (HCoV-NL63)
Query: 2 FYALFRPGT 10
++ALF+P T
Sbjct: 57 YFALFKPLT 65
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 3 YALFRPG 9
Y LF PG
Sbjct: 114 YGLFGPG 120
>sp|E3GL_ADE06|EARLY E3 18.5 kDa glycoprotein|Human adenovirus C serotype 6
Query: 3 YALFRPG 9
YA+++PG
Sbjct: 66 YAIWQPG 72
>sp|E3GL_ADE02|EARLY E3 18.5 kDa glycoprotein|Human adenovirus C serotype 2
Query: 3 YALFRPG 9
YA+++PG
Sbjct: 66 YAIWQPG 72
>sp|E3GL_ADE05|EARLY E3 18.5 kDa glycoprotein|Human adenovirus C serotype 5
Query: 3 YALFRPG 9
YA+++PG
Sbjct: 67 YAIWQPG 73
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 GFYALFRPG 9
G Y ++ PG
Sbjct: 1512 GVYRIYTPG 1520
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GFYALFRPG 9
G +LF PG
Sbjct: 398 GLVSLFTPG 406
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 GFYALFRPG 9
GF +L PG
Sbjct: 398 GFVSLLAPG 406
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 GFYALFRPG 9
G Y ++ PG
Sbjct: 1512 GVYRIYAPG 1520
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 GFYALFRPG 9
F +LF PG
Sbjct: 397 AFVSLFSPG 405
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 GFYALFRPG 9
G Y ++ PG
Sbjct: 1514 GAYRIYSPG 1522
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 GFYALFRPG 9
G Y ++ PG
Sbjct: 1514 GAYRIYSPG 1522
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 GFYALFRPG 9
G +LF PG
Sbjct: 398 GLASLFTPG 406
63|SequenceR|320|311|VTAFSGFYAL
>sp|K81_HHV8P|PROTEIN K8.1|Human herpesvirus 8 type P
Query: 1 VTAFSGFYA 9
++AFSG Y+
Sbjct: 137 ISAFSGSYS 145
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 1 VTAFSGFYA 9
V F+GFY+
Sbjct: 56 VGNFTGFYS 64
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 TAFSGFYAL 10
T+F+ FY++
Sbjct: 585 TSFNSFYSV 593
64|SequenceR|325|316|FWLLGVTAFS
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 FWLLGVTA 8
F+LLG++A
Sbjct: 2315 FYLLGLSA 2322
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 FWLLGVTA 8
F+LLG++A
Sbjct: 2315 FYLLGLSA 2322
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 2 WLLGV 6
WLLG+
Sbjct: 63 WLLGI 67
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 2 WLLGV 6
WLLG+
Sbjct: 63 WLLGI 67
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 WLLGV 6
WLLG+
Sbjct: 1099 WLLGI 1103
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 WLLGV 6
WLLG+
Sbjct: 1100 WLLGI 1104
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 2 WLLGV 6
WLLG+
Sbjct: 1100 WLLGI 1104
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 2 WLLGV 6
WLLG+
Sbjct: 1102 WLLGI 1106
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 WLLGV 6
WLLG+
Sbjct: 1101 WLLGI 1105
>sp|PG042_VACCC|VIRION nicking-joining enzyme|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FWLLGV 6
+W LGV
Sbjct: 165 YWYLGV 170
65|SequenceR|330|321|LSHHAFWLLG
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LSHHAFWLL 9
L HHA++LL
Sbjct: 89 LRHHAYYLL 97
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LSHHAFWLL 9
L HHA++LL
Sbjct: 89 LRHHAYYLL 97
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LSHHAFWLL 9
L HHA++LL
Sbjct: 89 LRHHAYYLL 97
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LSHHAFWLL 9
+S+HAFW+
Sbjct: 3135 VSNHAFWVF 3143
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LSHHAFWLL 9
+S+HAFW+
Sbjct: 3135 VSNHAFWVF 3143
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 1 LSHHAFW 7
L HH +W
Sbjct: 136 LKHHNYW 142
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 LSHHAFWLLG 10
+SHH +++L
Sbjct: 416 VSHHGYYILA 425
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 LSHHAFWLLG 10
+SHH +++L
Sbjct: 415 VSHHGYYILA 424
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 1 LSHHAFWLLG 10
+SHH +++L
Sbjct: 414 VSHHGYYILA 423
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 2 SHHAFWL 8
SH FWL
Sbjct: 497 SHSHFWL 503
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 2 SHHAFWL 8
SH FWL
Sbjct: 486 SHSHFWL 492
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 2 SHHAFWL 8
SH FWL
Sbjct: 515 SHSHFWL 521
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 5 AFWLLG 10
FWLLG
Sbjct: 1489 GFWLLG 1494
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 2 SHHAFWL 8
SH FWL
Sbjct: 498 SHSHFWL 504
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SHHAFW 7
+H AFW
Sbjct: 188 THFAFW 193
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 2 SHHAFW 7
+H AFW
Sbjct: 188 THFAFW 193
>sp|VPU_HV1Z2|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 LSHHAFW 7
+ HHA W
Sbjct: 70 MGHHAPW 76
>sp|VPU_HV1RH|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 LSHHAFW 7
+ HHA W
Sbjct: 70 MGHHAPW 76
>sp|VPU_HV1ND|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 LSHHAFW 7
+ HHA W
Sbjct: 70 MGHHAPW 76
>sp|VPU_HV1H3|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 LSHHAFW 7
+ HHA W
Sbjct: 70 MGHHAPW 76
>sp|VPU_HV1H2|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 LSHHAFW 7
+ HHA W
Sbjct: 71 MGHHAPW 77
>sp|VPU_HV1EL|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 LSHHAFW 7
+ HHA W
Sbjct: 70 MGHHAPW 76
>sp|VPU_HV1C4|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 LSHHAFW 7
+ HHA W
Sbjct: 70 MGHHAPW 76
>sp|VPU_HV1B8|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 LSHHAFW 7
+ HHA W
Sbjct: 71 MGHHAPW 77
>sp|VPU_HV1B1|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 LSHHAFW 7
+ HHA W
Sbjct: 70 MGHHAPW 76
>sp|VPU_HV1BR|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 LSHHAFW 7
+ HHA W
Sbjct: 70 MGHHAPW 76
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 LSHHAFW 7
L+H FW
Sbjct: 325 LNHQNFW 331
Query: 3 HHAFW---LLG 10
HH W LLG
Sbjct: 2016 HHCIWGRQLLG 2026
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 1 LSHHAFWLLG 10
L H +F LLG
Sbjct: 441 LEHSSFQLLG 450
>sp|VPU_HV1LW|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 LSHHAFW 7
+ HHA W
Sbjct: 70 MGHHAPW 76
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 1 LSHHAFWLLG 10
L H +F LLG
Sbjct: 441 LEHSSFQLLG 450
>sp|VPU_HV1Z8|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 LSHHAFW 7
+ HHA W
Sbjct: 26 MGHHAPW 32
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 SHHAFWL 8
+HH WL
Sbjct: 1971 AHHVCWL 1977
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 SHHAFWL 8
+HH WL
Sbjct: 1971 AHHVCWL 1977
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 SHHAFWL 8
+HH WL
Sbjct: 1971 AHHVCWL 1977
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 SHHAFWL 8
+HH WL
Sbjct: 1971 AHHVCWL 1977
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 SHHAFWL 8
+HH WL
Sbjct: 1971 AHHVCWL 1977
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 SHHAFWL 8
+HH WL
Sbjct: 1971 AHHVCWL 1977
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 SHHAFWL 8
+HH WL
Sbjct: 1971 AHHVCWL 1977
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 SHHAFWL 8
+HH WL
Sbjct: 1971 AHHVCWL 1977
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 SHHAFWL 8
+HH WL
Sbjct: 1971 AHHVCWL 1977
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 HAFWLLG 10
H FW+L
Sbjct: 3136 HFFWVLA 3142
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 HAFWLLG 10
H FW+L
Sbjct: 3136 HFFWVLA 3142
>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LSHHAFWL 8
+ HH W+
Sbjct: 176 IGHHYIWI 183
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 LSHHAFWL 8
+ HH W+
Sbjct: 176 IGHHYIWI 183
>sp|PG056_VACCC|PROTEIN OPG056|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LSHHAFWL 8
+ HH W+
Sbjct: 176 IGHHYIWI 183
>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LSHHAFWL 8
+ HH W+
Sbjct: 176 IGHHYIWI 183
>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)
Query: 1 LSHHAFWL 8
+ HH W+
Sbjct: 176 IGHHYIWI 183
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 SHHAFWL 8
+HH WL
Sbjct: 571 AHHGPWL 577
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 SHHAFWL 8
+HH WL
Sbjct: 571 AHHGPWL 577
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 SHHAFWL 8
+HH WL
Sbjct: 571 AHHGPWL 577
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 SHHAFWL 8
+HH WL
Sbjct: 571 AHHGPWL 577
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 SHHAFWL 8
+HH WL
Sbjct: 571 AHHGPWL 577
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 SHHAFWL 8
+HH WL
Sbjct: 571 AHHGPWL 577
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 SHHAFWL 8
+HH WL
Sbjct: 571 AHHGPWL 577
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 SHHAFWL 8
+HH WL
Sbjct: 571 AHHGPWL 577
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 FWLLG 10
FW+LG
Sbjct: 676 FWVLG 680
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 FWLLG 10
FW+LG
Sbjct: 675 FWVLG 679
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LSHHAFWL 8
+ HH W+
Sbjct: 531 MPHHPHWV 538
>sp|UL11P_HCMVM|PROTEIN UL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LSHHAFWLLG 10
L+ HA W+L
Sbjct: 225 LATHALWVLA 234
66|SequenceR|335|326|RVHLFLSHHA
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 RVHLFLSH 8
RVH LSH
Sbjct: 1454 RVHQSLSH 1461
>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 1 RVHLFLSHHA 10
R FL+HH+
Sbjct: 256 RSKTFLNHHS 265
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 4 LFLSHH 9
LFLSH+
Sbjct: 354 LFLSHY 359
>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 RVHLFLSH 8
R HL L+H
Sbjct: 261 RCHLVLTH 268
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 3 HLFLSHHA 10
H+F +H+A
Sbjct: 1021 HVFETHYA 1028
>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 RVHLFLSH 8
R HL L+H
Sbjct: 261 RCHLVLTH 268
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 RVHLFLSH 8
R+H +LSH
Sbjct: 457 RMHDYLSH 464
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 RVHLFLSH 8
R+H +LSH
Sbjct: 458 RMHDYLSH 465
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 RVHLFLSH 8
R+H +LSH
Sbjct: 457 RMHDYLSH 464
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 4 LFLSHH 9
LFLSH+
Sbjct: 354 LFLSHN 359
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 LFLSHH 9
LFLSH+
Sbjct: 354 LFLSHN 359
>sp|BTRF1_EBVG|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 HLFLSH 8
HL+L H
Sbjct: 258 HLYLKH 263
>sp|BTRF1_EBVB9|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 HLFLSH 8
HL+L H
Sbjct: 258 HLYLKH 263
>sp|BTRF1_EBVA8|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 HLFLSH 8
HL+L H
Sbjct: 258 HLYLKH 263
>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 FLSHH 9
FL+HH
Sbjct: 339 FLTHH 343
67|SequenceR|340|331|ARTAKRVHLF
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 2 RTAKRVHLF 10
RTAK HL
Sbjct: 597 RTAKLCHLL 605
>sp|VL2_HPV57|MINOR capsid protein L2|Human papillomavirus 57
Query: 5 KRVHLF 10
KRVH F
Sbjct: 452 KRVHYF 457
>sp|VL2_HPV2A|MINOR capsid protein L2|Human papillomavirus type 2a
Query: 5 KRVHLF 10
KRVH F
Sbjct: 455 KRVHYF 460
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 5 KRVHLF 10
KR+H+F
Sbjct: 647 KRLHIF 652
>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain
Query: 5 KRVHLF 10
KR+H+F
Sbjct: 647 KRLHIF 652
>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate
Query: 5 KRVHLF 10
KR+H+F
Sbjct: 647 KRLHIF 652
68|SequenceR|345|336|NLLGMARTAK
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 2 LLGMARTAK 10
LLGM+R K
Sbjct: 149 LLGMSRCGK 157
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 2 LLGMARTAK 10
LLGM+R K
Sbjct: 149 LLGMSRCGK 157
>sp|PG160_MONPV|DNA packaging protein OPG160|Monkeypox virus (MPXV)
Query: 1 NLLGMARTAK 10
N+L M +TA+
Sbjct: 215 NMLNMIQTAR 224
>sp|PG160_VACCC|DNA packaging protein OPG160|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NLLGMARTAK 10
N+L M +TA+
Sbjct: 185 NMLNMIQTAR 194
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 4 GMARTAK 10
G+ARTA+
Sbjct: 250 GVARTAR 256
>sp|UL06_HCMVA|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NLLGMARTAK 10
N+L ART +
Sbjct: 29 NMLAFARTPR 38
>sp|UL06_HCMVM|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NLLGMARTAK 10
N+L ART +
Sbjct: 25 NMLAFARTPR 34
69|SequenceR|350|341|ALSLTNLLGM
>sp|MB43_HHV2H|MEMBRANE protein UL43|Human herpesvirus 2 (strain HG52)
Query: 2 LSLTNLLGM 10
+SLT +LG+
Sbjct: 359 ISLTQVLGL 367
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 3 SLTNLL 8
SLTNLL
Sbjct: 403 SLTNLL 408
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 ALSLTN 6
ALSLTN
Sbjct: 1085 ALSLTN 1090
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 ALSLTN 6
ALSLTN
Sbjct: 1082 ALSLTN 1087
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 LSLTNLLGM 10
+SLT LLG+
Sbjct: 1438 VSLTYLLGV 1446
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 LSLTNLLGM 10
+SLT LLG+
Sbjct: 1458 VSLTYLLGV 1466
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 LSLTNLLGM 10
+SLT LLG+
Sbjct: 1488 VSLTYLLGV 1496
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 LSLTNLLGM 10
+SLT LLG+
Sbjct: 1438 VSLTYLLGV 1446
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 LSLTNLLGM 10
+SLT LLG+
Sbjct: 1458 VSLTYLLGV 1466
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 LSLTNLLGM 10
+SLT LLG+
Sbjct: 1488 VSLTYLLGV 1496
70|SequenceR|355|346|LGGVFALSLT
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 LGGVFALSLT 10
LGG LSLT
Sbjct: 355 LGGNIGLSLT 364
71|SequenceR|360|351|QYALPLGGVF
>sp|VP6_ROTYO|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 QYALPLGGVF 10
+YA+P+G VF
Sbjct: 352 EYAIPVGPVF 361
>sp|VP6_ROTWI|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 1 QYALPLGGVF 10
+YA+P+G VF
Sbjct: 352 EYAIPVGPVF 361
>sp|VP6_ROTHW|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 QYALPLGGVF 10
+YA+P+G VF
Sbjct: 352 EYAIPVGPVF 361
>sp|VP6_ROTHU|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 1 QYALPLGGVF 10
+YA+P+G VF
Sbjct: 352 EYAIPVGPVF 361
>sp|VP6_ROTHT|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 QYALPLGGVF 10
+YA+P+G VF
Sbjct: 352 EYAIPVGPVF 361
>sp|VP6_ROTHS|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 QYALPLGGVF 10
+YA+P+G VF
Sbjct: 352 EYAIPVGPVF 361
>sp|VP6_ROTHP|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 QYALPLGGVF 10
+YA+P+G VF
Sbjct: 352 EYAIPVGPVF 361
>sp|VP6_ROTHL|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 QYALPLGGVF 10
+YA+P+G VF
Sbjct: 352 EYAIPVGPVF 361
>sp|VP6_ROTHK|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 QYALPLGGVF 10
+YA+P+G VF
Sbjct: 352 EYAIPVGPVF 361
>sp|VP6_ROTHD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 QYALPLGGVF 10
+YA+P+G VF
Sbjct: 352 EYAIPVGPVF 361
>sp|VP6_ROTH7|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 1 QYALPLGGVF 10
+YA+P+G VF
Sbjct: 352 EYAIPVGPVF 361
>sp|VP6_ROTH6|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 QYALPLGGVF 10
+YA+P+G VF
Sbjct: 352 EYAIPVGPVF 361
>sp|VP6_ROTH1|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 1 QYALPLGGVF 10
+YA+P+G VF
Sbjct: 352 EYAIPVGPVF 361
>sp|VP6_ROTAD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 QYALPLGGVF 10
+YA+P+G VF
Sbjct: 352 EYAIPVGPVF 361
>sp|VP6_ROT41|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 1 QYALPLGGVF 10
+YA+P+G VF
Sbjct: 352 EYAIPVGPVF 361
>sp|VP6_ROTH3|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 QYALPLGGVF 10
+YA+P+G VF
Sbjct: 352 EYAVPVGPVF 361
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 2 YALPLGGV 9
Y PLGGV
Sbjct: 413 YCFPLGGV 420
>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6
Query: 2 YALPLGGV 9
Y PLGG+
Sbjct: 302 YCFPLGGI 309
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 2 YALPLGGV 9
Y PLGG+
Sbjct: 425 YCFPLGGI 432
>sp|CAPSH_ADE01|HEXON protein|Human adenovirus C serotype 1
Query: 2 YALPLGGV 9
Y PLGG+
Sbjct: 306 YCFPLGGI 313
>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate Human/India/Ind3/1967)
Query: 5 PLGGVF 10
P+GGVF
Sbjct: 198 PIGGVF 203
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 5 PLGGVF 10
P+GGVF
Sbjct: 198 PIGGVF 203
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 5 PLGGVF 10
P+GGVF
Sbjct: 198 PIGGVF 203
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 PLGGVF 10
P+GGVF
Sbjct: 198 PIGGVF 203
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 5 PLGGVF 10
P+GGVF
Sbjct: 198 PIGGVF 203
>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)
Query: 5 PLGGVF 10
P+GGVF
Sbjct: 198 PIGGVF 203
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 YALPLGG 8
YALP+ G
Sbjct: 420 YALPIAG 426
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 2 YALPLGGVF 10
Y P GGVF
Sbjct: 781 YRKPSGGVF 789
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 2 YALPLGGVF 10
Y P GGVF
Sbjct: 781 YRKPSGGVF 789
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 PLGGVF 10
P+GGVF
Sbjct: 275 PVGGVF 280
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 PLGGVF 10
P+GGVF
Sbjct: 275 PVGGVF 280
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 PLGGVF 10
P+GGVF
Sbjct: 275 PVGGVF 280
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 YALPLGGV 9
YALP+ G+
Sbjct: 446 YALPIKGL 453
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 YALPLGG 8
YA P+GG
Sbjct: 434 YAPPIGG 440
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 YALPLGG 8
YA P+GG
Sbjct: 432 YAPPIGG 438
>sp|UL142_HCMVM|MEMBRANE glycoprotein UL142|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 YALPLGG 8
YA+P+G
Sbjct: 272 YAIPMGA 278
>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United
Query: 4 LPLGGVF 10
LPL GVF
Sbjct: 510 LPLNGVF 516
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Puerto
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Brevig
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Guinea
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I01A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I01A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31
Query: 1 QYALPLGG 8
Q LP+GG
Sbjct: 268 QSGLPVGG 275
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 5 PLGGVF 10
P+GGV+
Sbjct: 120 PVGGVY 125
>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United
Query: 4 LPLGGVF 10
LP+ GVF
Sbjct: 495 LPINGVF 501
>sp|GD_HHV23|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain 333)
Query: 1 QYALPL 6
+YALPL
Sbjct: 215 KYALPL 220
>sp|GD_HHV2H|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain HG52)
Query: 1 QYALPL 6
+YALPL
Sbjct: 215 KYALPL 220
72|SequenceR|365|356|FASTQQYALP
>sp|VP6_ROTHW|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 2 ASTQQYALP 10
A Q+YA+P
Sbjct: 348 AVRQEYAIP 356
>sp|VP6_ROTHK|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 2 ASTQQYALP 10
A Q+YA+P
Sbjct: 348 AVRQEYAIP 356
>sp|VP6_ROTAD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 2 ASTQQYALP 10
A Q+YA+P
Sbjct: 348 AVRQEYAIP 356
>sp|VP6_ROTYO|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 2 ASTQQYALP 10
A Q+YA+P
Sbjct: 348 AVRQEYAIP 356
>sp|VP6_ROTHU|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 2 ASTQQYALP 10
A Q+YA+P
Sbjct: 348 AVRQEYAIP 356
>sp|VP6_ROTHT|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 2 ASTQQYALP 10
A Q+YA+P
Sbjct: 348 AVRQEYAIP 356
>sp|VP6_ROTHP|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 2 ASTQQYALP 10
A Q+YA+P
Sbjct: 348 AVRQEYAIP 356
>sp|VP6_ROTWI|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 2 ASTQQYALP 10
A Q+YA+P
Sbjct: 348 AVRQEYAIP 356
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 1 FASTQQYALP 10
F +TQ ALP
Sbjct: 1077 FGATQLNALP 1086
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 1 FASTQQYALP 10
F +TQ ALP
Sbjct: 1077 FGATQLNALP 1086
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 FASTQQYAL 9
F+S Q+Y +
Sbjct: 888 FSSVQEYVM 896
>sp|VP6_ROTHL|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 5 QQYALP 10
Q+YA+P
Sbjct: 351 QEYAIP 356
>sp|VP6_ROTH1|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 5 QQYALP 10
Q+YA+P
Sbjct: 351 QEYAIP 356
>sp|VP6_ROTHD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 5 QQYALP 10
Q+YA+P
Sbjct: 351 QEYAIP 356
>sp|VP6_ROTH7|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 5 QQYALP 10
Q+YA+P
Sbjct: 351 QEYAIP 356
>sp|VP6_ROTH6|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 5 QQYALP 10
Q+YA+P
Sbjct: 351 QEYAIP 356
>sp|VP6_ROT41|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 5 QQYALP 10
Q+YA+P
Sbjct: 351 QEYAIP 356
73|SequenceR|370|361|RPQRAFASTQ
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 2 PQRAFAST 9
P RAFA+T
Sbjct: 1234 PSRAFAAT 1241
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 PQRAFASTQ 10
PQRA+A Q
Sbjct: 804 PQRAYALDQ 812
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 PQRAFAST 9
PQRA+A T
Sbjct: 812 PQRAYAWT 819
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 PQRAFASTQ 10
PQRA+A Q
Sbjct: 804 PQRAYALDQ 812
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 2 PQRAFA 7
PQRA+A
Sbjct: 804 PQRAYA 809
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PQRAFA 7
PQRA+A
Sbjct: 804 PQRAYA 809
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 PQRAFA 7
PQRA+A
Sbjct: 804 PQRAYA 809
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 PQRAFA 7
PQRA+A
Sbjct: 804 PQRAYA 809
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 PQRAFA 7
PQRA+A
Sbjct: 809 PQRAYA 814
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 PQRAFA 7
PQRA+A
Sbjct: 802 PQRAYA 807
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 PQRAFA 7
PQRA+A
Sbjct: 810 PQRAYA 815
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 PQRAFA 7
PQRA+A
Sbjct: 810 PQRAYA 815
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 PQRAFASTQ 10
P+RA+A Q
Sbjct: 804 PERAYAYDQ 812
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PQRAFASTQ 10
PQ FA+T+
Sbjct: 182 PQTPFATTE 190
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PQRAFASTQ 10
PQ FA+T+
Sbjct: 182 PQTPFATTE 190
74|SequenceR|375|366|RELEDRPQRA
>sp|VP22_VZVO|TEGUMENT protein VP22|Varicella-zoster virus (strain Oka vaccine)
Query: 2 ELEDRPQRA 10
+LED P+RA
Sbjct: 135 KLEDSPKRA 143
>sp|VP22_VZVD|TEGUMENT protein VP22|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 ELEDRPQRA 10
+LED P+RA
Sbjct: 135 KLEDSPKRA 143
>sp|VU55_HHV6Z|UNCHARACTERIZED protein U55|Human herpesvirus 6B (strain Z29)
Query: 2 ELEDRPQRA 10
E ED+P R
Sbjct: 466 EYEDKPARG 474
>sp|VU55_HHV6U|UNCHARACTERIZED protein U55|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 ELEDRPQRA 10
E ED+P R
Sbjct: 406 EYEDKPARG 414
>sp|TEG6_HHV1E|TEGUMENT protein UL55|Human herpesvirus 1 (strain HFEM)
Query: 1 RELEDR 6
RELED+
Sbjct: 97 RELEDK 102
>sp|TEG6_HHV11|TEGUMENT protein UL55|Human herpesvirus 1 (strain 17)
Query: 1 RELEDR 6
RELED+
Sbjct: 97 RELEDK 102
>sp|TEG6_HHV2H|TEGUMENT protein UL55|Human herpesvirus 2 (strain HG52)
Query: 1 RELEDR 6
RELED+
Sbjct: 97 RELEDK 102
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 2 ELEDRPQRA 10
E+ +RP+RA
Sbjct: 363 EIAERPERA 371
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 ELEDRPQ 8
ELED P+
Sbjct: 16 ELEDEPR 22
>sp|VIF_HV2RO|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 5 DRPQR 9
DRPQR
Sbjct: 160 DRPQR 164
>sp|SF33K_ADE41|PROTEIN 33K|Human adenovirus F serotype 41
Query: 2 ELEDRP 7
ELED+P
Sbjct: 55 ELEDKP 60
>sp|VIF_HV2BE|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 5 DRPQR 9
DRPQR
Sbjct: 160 DRPQR 164
>sp|VIF_HV2G1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 5 DRPQR 9
DRPQR
Sbjct: 160 DRPQR 164
>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 5 DRPQR 9
DRPQR
Sbjct: 160 DRPQR 164
75|SequenceR|380|371|CSVRVRELED
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 CSVRVRELED 10
CS+ V ELE+
Sbjct: 389 CSLTVEELEE 398
>sp|UL68_HCMVA|UNCHARACTERIZED protein UL68|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CSVRVR 6
C+VRVR
Sbjct: 25 CTVRVR 30
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 4 RVRELE 9
RVRELE
Sbjct: 486 RVRELE 491
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 CSVRVR 6
CSVRV+
Sbjct: 2443 CSVRVK 2448
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 CSVRVR 6
CSVRV+
Sbjct: 2463 CSVRVK 2468
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 CSVRVR 6
CSVRV+
Sbjct: 2493 CSVRVK 2498
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 CSVRVR 6
CSVRV+
Sbjct: 2443 CSVRVK 2448
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 CSVRVR 6
CSVRV+
Sbjct: 2463 CSVRVK 2468
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 CSVRVR 6
CSVRV+
Sbjct: 2493 CSVRVK 2498
76|SequenceR|385|376|LFIITCSVRV
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 1 LFIITCSVRV 10
+F+ITC RV
Sbjct: 474 IFLITCCKRV 483
>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)
Query: 1 LFIITCSVRV 10
+FI+TC RV
Sbjct: 474 IFIMTCCGRV 483
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 1 LFIITCSVR 9
+F+ITC R
Sbjct: 474 IFLITCCRR 482
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 2 FIITC 6
FIITC
Sbjct: 1025 FIITC 1029
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 1 LFIITCSVRV 10
FI+ C +R+
Sbjct: 469 FFILICLIRI 478
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 FIITCSV 8
F++ CS+
Sbjct: 468 FVVACSI 474
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 FIITCSV 8
F++ CS+
Sbjct: 468 FVVACSI 474
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 FIITCSV 8
F++ CS+
Sbjct: 468 FVVACSI 474
>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LFIITC 6
LF++TC
Sbjct: 178 LFVVTC 183
>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)
Query: 1 LFIITC 6
LF++TC
Sbjct: 178 LFVVTC 183
>sp|EBNA1_EBVB9|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 TCSVRV 10
TC++RV
Sbjct: 590 TCNIRV 595
>sp|BILF2_EBVB9|GLYCOPROTEIN BILF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LFIITCSV 8
L +ITC+V
Sbjct: 212 LLLITCAV 219
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 LFIITCSVR 9
LFI++C ++
Sbjct: 869 LFIVSCLMK 877
77|SequenceR|390|381|QFISALFIIT
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 1 QFISALFII 9
++IS LF+I
Sbjct: 373 EYISDLFLI 381
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 1 QFISALFIIT 10
QFI L IIT
Sbjct: 400 QFIFQLCIIT 409
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 QFISALFIIT 10
QF+S +IT
Sbjct: 647 QFVSDAIVIT 656
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 QFISALFIIT 10
QF+S +IT
Sbjct: 646 QFVSDAIVIT 655
78|SequenceR|395|386|TWMALQFISA
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 1 TWMALQFIS 9
+W+ LQ+I+
Sbjct: 445 SWIMLQYIT 453
>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)
Query: 1 TWMALQ 6
TW+A+Q
Sbjct: 258 TWVAMQ 263
>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)
Query: 1 TWMALQ 6
TW+A+Q
Sbjct: 258 TWVAMQ 263
>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)
Query: 1 TWMALQ 6
TW+A+Q
Sbjct: 258 TWVAMQ 263
>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins
Query: 1 TWMALQ 6
TW+A+Q
Sbjct: 258 TWVAMQ 263
>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)
Query: 1 TWMALQ 6
TW+A+Q
Sbjct: 258 TWVAMQ 263
>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)
Query: 1 TWMALQ 6
TW+A+Q
Sbjct: 258 TWVAMQ 263
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 1 TWMALQ 6
TW+A+Q
Sbjct: 258 TWVAMQ 263
>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)
Query: 1 TWMALQ 6
TW+A+Q
Sbjct: 258 TWVAMQ 263
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 1 TWMALQ 6
TW+A+Q
Sbjct: 258 TWVAMQ 263
>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)
Query: 1 TWMALQ 6
TW+A+Q
Sbjct: 258 TWVAMQ 263
>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 1 TWMALQ 6
TW+A+Q
Sbjct: 258 TWVAMQ 263
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 WMALQFISA 10
W A +F+SA
Sbjct: 1375 WPATEFLSA 1383
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 WMALQFISA 10
W A +F+SA
Sbjct: 1375 WPATEFLSA 1383
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 WMALQFISA 10
W A +F+SA
Sbjct: 1375 WPATEFLSA 1383
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 WMALQFISA 10
W A +F+SA
Sbjct: 1375 WPATEFLSA 1383
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 2 WMALQFISA 10
W A +F+SA
Sbjct: 1303 WPATEFLSA 1311
79|SequenceR|400|391|HLLATTWMAL
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 HLLATTWMA 9
HLL W+A
Sbjct: 2493 HLLRKNWLA 2501
>sp|VP6_ROTHU|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 4 ATTWM 8
ATTW+
Sbjct: 244 ATTWL 248
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 1 HLLATTWMA 9
H +TTW+A
Sbjct: 215 HNASTTWLA 223
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 1 HLLATTWMA 9
H +TTW+A
Sbjct: 215 HNASTTWLA 223
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 1 HLLATTWMA 9
H +TTW+A
Sbjct: 215 HNASTTWLA 223
80|SequenceR|405|396|LTEAQHLLAT
>sp|GL_EBVB9|ENVELOPE glycoprotein L|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 AQHLLA 9
AQHLLA
Sbjct: 36 AQHLLA 41
>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United
Query: 1 LTEAQHL 7
+TEA HL
Sbjct: 399 ITEATHL 405
>sp|GL_EBVG|ENVELOPE glycoprotein L|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 AQHLLA 9
AQHLLA
Sbjct: 36 AQHLLA 41
>sp|GL_EBVA8|ENVELOPE glycoprotein L|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 AQHLLA 9
AQHLLA
Sbjct: 36 AQHLLA 41
81|SequenceR|410|401|WVSPQLTEAQ
>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 WVSPQLTEA 9
W++P LTE+
Sbjct: 9 WMTPSLTES 17
>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 WVSPQLTEA 9
W++P LTE+
Sbjct: 9 WMTPSLTES 17
>sp|NCAP_EBOZM|NUCLEOPROTEIN ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 WVSPQLTEA 9
W++P LTE+
Sbjct: 9 WMAPSLTES 17
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 1 WVSPQLTEAQ 10
W++P L E+Q
Sbjct: 489 WLTPNLQESQ 498
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 2 VSPQLTEAQ 10
++PQ T+AQ
Sbjct: 865 INPQFTDAQ 873
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VSPQLTEA 9
VSPQ+T+A
Sbjct: 497 VSPQVTKA 504
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 2 VSPQLTEA 9
VSPQ+T+A
Sbjct: 496 VSPQVTKA 503
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 WVSPQL 6
WVSP L
Sbjct: 1027 WVSPSL 1032
>sp|VPK2_VACCP|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 WVSPQL 6
W+SP L
Sbjct: 13 WMSPHL 18
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 WVSPQLT 7
W+ PQ++
Sbjct: 1469 WIIPQIS 1475
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 SPQLTEAQ 10
SPQ T+AQ
Sbjct: 2922 SPQKTQAQ 2929
82|SequenceR|415|406|ERGGFWVSPQ
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 4 GFWVSP 9
GFWVSP
Sbjct: 1025 GFWVSP 1030
>sp|UL110_HCMVA|UNCHARACTERIZED protein UL110|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RGGFWVSP 9
R GFW SP
Sbjct: 45 RSGFWGSP 52
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 4 GFWVSP 9
GFWVSP
Sbjct: 1117 GFWVSP 1122
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 4 GFWVSP 9
GFWVSP
Sbjct: 1116 GFWVSP 1121
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 RGGFWVSPQ 10
RGG W SP+
Sbjct: 1777 RGGAWKSPE 1785
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 RGGFWVSPQ 10
RGG W SP+
Sbjct: 1747 RGGAWKSPE 1755
>sp|NS1_I56A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 1 ERGGFWVSPQ 10
E GGF +SP+
Sbjct: 208 ENGGFLLSPK 217
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 GGFWVSP 9
G FWV P
Sbjct: 1644 GSFWVYP 1650
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 ERGGFWVS 8
+RG +W+S
Sbjct: 2032 QRGSYWLS 2039
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 ERGGFWVS 8
+RG +W+S
Sbjct: 2032 QRGSYWLS 2039
>sp|UL120_HCMVM|MEMBRANE protein UL120|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RGGFWVSPQ 10
R G+W PQ
Sbjct: 29 RVGWWYEPQ 37
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 4 GFWVSPQ 10
G W+ PQ
Sbjct: 572 GSWIKPQ 578
>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)
Query: 5 FWVSP 9
FW+SP
Sbjct: 35 FWMSP 39
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 5 FWVSP 9
FW+SP
Sbjct: 474 FWLSP 478
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 5 FWVSPQ 10
FW+ PQ
Sbjct: 1918 FWMHPQ 1923
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 5 FWVSP 9
FW+SP
Sbjct: 506 FWLSP 510
>sp|CEP3_HHV2H|CYTOPLASMIC envelopment protein 3|Human herpesvirus 2 (strain HG52)
Query: 1 ERGGFWVSPQ 10
E G F+V P
Sbjct: 42 EEGNFYVPPD 51
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 ERGGFWVS 8
+RG +W+S
Sbjct: 2033 QRGVYWLS 2040
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 ERGGFWVS 8
+RG +W+S
Sbjct: 2033 QRGVYWLS 2040
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 5 FWVSP 9
FW+SP
Sbjct: 509 FWLSP 513
>sp|CEP3_HHV1K|CYTOPLASMIC envelopment protein 3|Human herpesvirus 1 (strain KOS)
Query: 1 ERGGFWVSPQ 10
E G F+V P
Sbjct: 42 EEGNFYVPPD 51
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 GGFWVSPQ 10
GG W+ P+
Sbjct: 666 GGLWLHPE 673
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 5 FWVSP 9
FW++P
Sbjct: 1185 FWIAP 1189
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 5 FWVSP 9
FW++P
Sbjct: 1184 FWIAP 1188
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 GGFWVSPQ 10
GG W+ P+
Sbjct: 666 GGLWLHPE 673
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 5 FWVSP 9
FW++P
Sbjct: 1185 FWIAP 1189
>sp|CEP3_HHV11|CYTOPLASMIC envelopment protein 3|Human herpesvirus 1 (strain 17)
Query: 1 ERGGFWVSPQ 10
E G F+V P
Sbjct: 42 EEGNFYVPPD 51
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 2 RGGFW 6
RGG W
Sbjct: 2086 RGGLW 2090
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 2 RGGFWVSP 9
+ FW+SP
Sbjct: 465 KSQFWLSP 472
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 GGFWVSP 9
GG++V P
Sbjct: 5049 GGYYVKP 5055
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 3 GGFW 6
GGFW
Sbjct: 120 GGFW 123
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 3 GGFW 6
GGFW
Sbjct: 120 GGFW 123
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 3 GGFW 6
GGFW
Sbjct: 120 GGFW 123
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 5 FWVSP 9
FW+SP
Sbjct: 507 FWLSP 511
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 3 GGFW 6
GGFW
Sbjct: 120 GGFW 123
>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)
Query: 5 FWVSPQ 10
FW PQ
Sbjct: 359 FWSKPQ 364
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 4 GFWVSP 9
G WV P
Sbjct: 1298 GMWVKP 1303
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 4 GFWVSP 9
G WV P
Sbjct: 1319 GMWVKP 1324
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 4 GFWVSP 9
G WV P
Sbjct: 1300 GMWVKP 1305
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 4 GFWVSP 9
G WV P
Sbjct: 1299 GMWVKP 1304
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 5 FWVSP 9
FW+SP
Sbjct: 507 FWLSP 511
>sp|LRP1_HHV1F|LATENCY-RELATED protein 1|Human herpesvirus 1 (strain F)
Query: 3 GGFWVSP 9
GGF +SP
Sbjct: 273 GGFLLSP 279
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 GGFWVS 8
GG WVS
Sbjct: 302 GGTWVS 307
>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979
Query: 3 GGFWVS 8
GG WV+
Sbjct: 112 GGIWVT 117
83|SequenceR|420|411|FMLVHERGGF
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 FMLVHERGGF 10
FM HER GF
Sbjct: 253 FMRPHERNGF 262
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FMLVHERGGF 10
FM HER GF
Sbjct: 263 FMRPHERNGF 272
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FMLVHERGGF 10
FM HER GF
Sbjct: 263 FMRPHERNGF 272
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 MLVHERG 8
MLVH RG
Sbjct: 276 MLVHPRG 282
>sp|CVC1_HHV8P|CAPSID vertex component 1|Human herpesvirus 8 type P
Query: 1 FMLVHERGG 9
++ V+ERGG
Sbjct: 250 YVCVYERGG 258
>sp|VIE3_HCMVT|30 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 5 HERGGF 10
H RGGF
Sbjct: 124 HGRGGF 129
>sp|VIE2_HCMVT|VIRAL transcription factor IE2|Human cytomegalovirus (strain Towne)
Query: 5 HERGGF 10
H RGGF
Sbjct: 293 HGRGGF 298
>sp|VIE2_HCMVM|VIRAL transcription factor IE2|Human cytomegalovirus (strain Merlin)
Query: 5 HERGGF 10
H RGGF
Sbjct: 294 HGRGGF 299
>sp|VIE2_HCMVA|VIRAL transcription factor IE2|Human cytomegalovirus (strain AD169)
Query: 5 HERGGF 10
H RGGF
Sbjct: 294 HGRGGF 299
>sp|IE247_HCMVT|45 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 5 HERGGF 10
H RGGF
Sbjct: 124 HGRGGF 129
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 4 VHERGG 9
+H+RGG
Sbjct: 1494 IHKRGG 1499
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 4 VHERGG 9
+H+RGG
Sbjct: 1494 IHKRGG 1499
Query: 2 MLVHERG 8
++VH RG
Sbjct: 2185 LMVHRRG 2191
>sp|VP1_POVBK|MAJOR capsid protein VP1|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 4 VHERGG 9
VHE GG
Sbjct: 136 VHEHGG 141
>sp|VP1_POVBA|MAJOR capsid protein VP1|BK polyomavirus (strain AS) (BKPyV)
Query: 4 VHERGG 9
VHE GG
Sbjct: 136 VHENGG 141
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 4 VHERGGF 10
VH++GG
Sbjct: 1117 VHQQGGL 1123
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 4 VHERGGF 10
VH++GG
Sbjct: 1117 VHQQGGL 1123
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 4 VHERGGF 10
VH++GG
Sbjct: 1115 VHDQGGL 1121
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 2 MLVHERG 8
+++HE+G
Sbjct: 717 IIIHEKG 723
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 4 VHERGGF 10
VH++GG
Sbjct: 1115 VHDQGGL 1121
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 4 VHERGGF 10
VH++GG
Sbjct: 1115 VHDQGGL 1121
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 4 VHERGGF 10
VH++GG
Sbjct: 1115 VHDQGGL 1121
84|SequenceR|425|416|LALKAFMLVH
>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LALKAFM 7
+ALKAFM
Sbjct: 606 MALKAFM 612
>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LALKAFM 7
+ALKAFM
Sbjct: 606 MALKAFM 612
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 LALKAFMLVH 10
L LK F ++H
Sbjct: 778 LLLKTFQILH 787
85|SequenceR|430|421|SACPYLALKA
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 SACPYLA 7
SACPYL
Sbjct: 149 SACPYLG 155
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 SACPYLA 7
SACPYL
Sbjct: 149 SACPYLG 155
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 SACPYLA 7
SACPYL
Sbjct: 149 SACPYLG 155
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 SACPYLA 7
SACPYL
Sbjct: 138 SACPYLG 144
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 SACPYLA 7
SACPYL
Sbjct: 138 SACPYLG 144
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 SACPYLA 7
SACPYL
Sbjct: 138 SACPYLG 144
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 SACPYLA 7
SACPYL
Sbjct: 138 SACPYLG 144
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 1 SACPYLA 7
SACPY+
Sbjct: 149 SACPYIG 155
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 1 SACPY 5
SACPY
Sbjct: 149 SACPY 153
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 1 SACPY 5
SACPY
Sbjct: 149 SACPY 153
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 SACPY 5
SACPY
Sbjct: 149 SACPY 153
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 SACPY 5
SACPY
Sbjct: 149 SACPY 153
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 1 SACPY 5
SACPY
Sbjct: 145 SACPY 149
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 SACPY 5
SACPY
Sbjct: 141 SACPY 145
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 SACPY 5
SACPY
Sbjct: 149 SACPY 153
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 SACPY 5
SACPY
Sbjct: 149 SACPY 153
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 SACPY 5
SACPY
Sbjct: 149 SACPY 153
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 1 SACPY 5
SACPY
Sbjct: 147 SACPY 151
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 SACPY 5
SACPY
Sbjct: 149 SACPY 153
>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988
Query: 1 SACPY 5
+ACPY
Sbjct: 151 AACPY 155
>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New
Query: 1 SACPY 5
+ACPY
Sbjct: 151 AACPY 155
>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 SACPY 5
+ACPY
Sbjct: 151 AACPY 155
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 1 SACPYLALK 9
S CP ALK
Sbjct: 788 SDCPVTALK 796
>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930
Query: 1 SACPY 5
+ACPY
Sbjct: 151 AACPY 155
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 3 CPYLALKA 10
CPYL +A
Sbjct: 108 CPYLGCQA 115
>sp|VIF_HV1U4|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 5 YLALKA 10
YLALKA
Sbjct: 147 YLALKA 152
>sp|ICP22_HHV11|TRANSCRIPTIONAL regulator ICP22|Human herpesvirus 1 (strain 17)
Query: 1 SACPY 5
+ACPY
Sbjct: 407 TACPY 411
>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980
Query: 3 CPYLALKA 10
C + ALKA
Sbjct: 10 CTFAALKA 17
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 ACPY 5
ACPY
Sbjct: 709 ACPY 712
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 ACPY 5
ACPY
Sbjct: 709 ACPY 712
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 CPYLALKA 10
C Y ALK+
Sbjct: 2101 CDYQALKS 2108
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 ACPY 5
ACPY
Sbjct: 709 ACPY 712
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 ACPY 5
ACPY
Sbjct: 709 ACPY 712
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 2 ACPY 5
ACPY
Sbjct: 709 ACPY 712
86|SequenceR|435|426|AFALLSACPY
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 AFALLSAC 8
AFA+L+AC
Sbjct: 778 AFAMLTAC 785
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 AFALLSAC 8
AFA+L+AC
Sbjct: 778 AFAMLTAC 785
>sp|DNBI_ADE12|PROBABLE DNA-binding protein|Human adenovirus A serotype 12
Query: 4 LLSACPY 10
LLS CP+
Sbjct: 20 LLSKCPH 26
>sp|VIF_HV2NZ|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 4 LLSACPY 10
LLS C Y
Sbjct: 131 LLSCCKY 137
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 AFALLSACPY 10
+FA L +C Y
Sbjct: 901 SFATLPSCQY 910
>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 4 LLSACPY 10
LLS C Y
Sbjct: 131 LLSCCKY 137
87|SequenceR|440|431|LLCTSAFALL
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin)
Query: 1 LLCTSAF 7
LLCTSAF
Sbjct: 57 LLCTSAF 63
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169)
Query: 1 LLCTSAF 7
LLCTSAF
Sbjct: 57 LLCTSAF 63
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 LCTSAFAL 9
LCT+AF
Sbjct: 597 LCTAAFTF 604
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 LCTSAFAL 9
LCT+AF
Sbjct: 597 LCTAAFTF 604
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 LCTSAFAL 9
LCT+AF
Sbjct: 593 LCTAAFTF 600
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 LLCTSAFAL 9
L CT FA+
Sbjct: 5664 LFCTRDFAM 5672
88|SequenceR|445|436|VSFRSLLCTS
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 4 RSLLCTS 10
RSL+C S
Sbjct: 576 RSLVCNS 582
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 4 RSLLCTS 10
RSL+C S
Sbjct: 576 RSLVCNS 582
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 VSFRSLLC 8
+SF L+C
Sbjct: 2056 ISFSKLIC 2063
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 VSFRSLLC 8
+SF L+C
Sbjct: 2056 ISFSKLIC 2063
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 FRSLLCTS 10
FR +CTS
Sbjct: 1177 FRLQICTS 1184
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 FRSLLCTS 10
FR +CTS
Sbjct: 1177 FRLQICTS 1184
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 FRSLLCTS 10
FR +CTS
Sbjct: 1178 FRLQICTS 1185
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 FRSLLCTS 10
FR +CTS
Sbjct: 1177 FRLQICTS 1184
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 FRSLLCTS 10
FR +CTS
Sbjct: 1178 FRLQICTS 1185
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 FRSLLCTS 10
FR +CTS
Sbjct: 1177 FRLQICTS 1184
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 FRSLLCT 9
FR+ +CT
Sbjct: 1184 FRAAICT 1190
89|SequenceR|450|441|LHFIGVSFRS
>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)
Query: 2 HFIGVSFR 9
+FIG+ FR
Sbjct: 699 YFIGIKFR 706
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 FIGVSF 8
FIGVSF
Sbjct: 2482 FIGVSF 2487
>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 LHFIGVSFRS 10
LHF GV+ +
Sbjct: 403 LHFAGVTLST 412
>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 1 LHFIGVSFRS 10
LHF GV+ +
Sbjct: 403 LHFAGVTLST 412
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 LHFIGVSFRS 10
LHF GV+ +
Sbjct: 403 LHFAGVTLST 412
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 LHFIGVSFRS 10
LHF GV+ +
Sbjct: 403 LHFAGVTLST 412
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 LHFIGVSFRS 10
LHF GV+ +
Sbjct: 403 LHFAGVTLST 412
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 LHFIGVSFRS 10
LHF GV+ +
Sbjct: 403 LHFAGVTLST 412
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 LHFIGVSFRS 10
LHF GV+ +
Sbjct: 404 LHFAGVTLST 413
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 LHFIGVSFRS 10
LHF GV+ +
Sbjct: 403 LHFAGVTLST 412
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 LHFIGVSFRS 10
LHF GV+ +
Sbjct: 403 LHFAGVTLST 412
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 LHFIGVSFRS 10
LHF GV+ +
Sbjct: 403 LHFAGVTLST 412
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 LHFIGVSFRS 10
LHF GV+ +
Sbjct: 403 LHFAGVTLST 412
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 LHFIGVSFRS 10
LHF GV+ +
Sbjct: 403 LHFAGVTLST 412
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 LHFIGVSFRS 10
LHF GV+ +
Sbjct: 403 LHFAGVTLST 412
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 LHFIGVSFRS 10
LHF GV+ +
Sbjct: 403 LHFAGVTLST 412
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 FIGVSF 8
FIGVSF
Sbjct: 2482 FIGVSF 2487
90|SequenceR|455|446|VAIQMLHFIG
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 1 VAIQMLHFIG 10
VA+ M HF+
Sbjct: 665 VAVVMAHFMA 674
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 5 MLHFIG 10
++HFIG
Sbjct: 311 LIHFIG 316
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 3 IQMLHFIG 10
+QML ++G
Sbjct: 77 LQMLKYVG 84
>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)
Query: 5 MLHFIG 10
++HF+G
Sbjct: 311 LIHFVG 316
>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)
Query: 5 MLHFIG 10
++HF+G
Sbjct: 311 LIHFVG 316
>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)
Query: 5 MLHFIG 10
++HF+G
Sbjct: 311 LIHFVG 316
>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins
Query: 5 MLHFIG 10
++HF+G
Sbjct: 311 LIHFVG 316
>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)
Query: 5 MLHFIG 10
++HF+G
Sbjct: 311 LIHFVG 316
>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)
Query: 5 MLHFIG 10
++HF+G
Sbjct: 311 LIHFVG 316
>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 5 MLHFIG 10
++HF+G
Sbjct: 311 LIHFVG 316
>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)
Query: 5 MLHFIG 10
++HF+G
Sbjct: 311 LIHFVG 316
>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)
Query: 5 MLHFIG 10
++HF+G
Sbjct: 311 LIHFVG 316
>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)
Query: 5 MLHFIG 10
++HF+G
Sbjct: 311 LIHFVG 316
>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)
Query: 5 MLHFIG 10
++HF+G
Sbjct: 311 LIHFVG 316
>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)
Query: 5 MLHFIG 10
++HF+G
Sbjct: 311 LIHFVG 316
>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 5 MLHFIG 10
++HF+G
Sbjct: 311 LIHFVG 316
>sp|NCAP_DUVV|NUCLEOPROTEIN virus (DUVV)
Query: 5 MLHFIG 10
++HF+G
Sbjct: 311 LIHFVG 316
>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 5 MLHFIG 10
++HF+G
Sbjct: 311 LIHFVG 316
>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 5 MLHFIG 10
++HF+G
Sbjct: 311 LIHFVG 316
91|SequenceR|460|451|LFACPVAIQM
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 1 LFACPVAIQM 10
LF CPV ++
Sbjct: 375 LFTCPVVCEV 384
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 LFACPVAIQM 10
LF+C +A+ +
Sbjct: 251 LFSCKIAVSL 260
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LFACP 5
LFACP
Sbjct: 982 LFACP 986
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 1 LFACPVA 7
LF+CP +
Sbjct: 1009 LFSCPTS 1015
>sp|BZLF1_EBVB9|LYTIC switch protein BZLF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LFACPVAIQ 9
+FACP A Q
Sbjct: 129 VFACPGANQ 137
>sp|BZLF1_EBVA8|LYTIC switch protein BZLF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LFACPVAIQ 9
+FACP A Q
Sbjct: 129 VFACPGANQ 137
>sp|ORF9B_SARS2|ORF9B protein|Severe acute respiratory syndrome coronavirus
Query: 5 PVAIQM 10
P+A+QM
Sbjct: 73 PIAVQM 78
92|SequenceR|465|456|LLRLLLFACP
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 1 LLRLLLFAC 9
+LRLL F+C
Sbjct: 512 ILRLLTFSC 520
>sp|J1I_HCMVA|UNCHARACTERIZED protein HKRFX|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 RLLLFACP 10
R LLF CP
Sbjct: 209 RALLFVCP 216
>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 2 LRLLLFACP 10
LR+ +F CP
Sbjct: 53 LRIKMFLCP 61
>sp|CEP2_HHV7J|CYTOPLASMIC envelopment protein 2|Human herpesvirus 7 (strain JI)
Query: 3 RLLLFACP 10
RL+L +CP
Sbjct: 315 RLILLSCP 322
>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LLRLLLFACP 10
L RL++ +CP
Sbjct: 318 LSRLIVLSCP 327
>sp|CEP2_HHV6Z|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 LLRLLLFACP 10
L RL++ +CP
Sbjct: 318 LSRLIILSCP 327
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 2 LRLLLFAC 9
LRLL ++C
Sbjct: 515 LRLLTYSC 522
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 2 LRLLLFAC 9
L +L+FAC
Sbjct: 580 LLILIFAC 587
93|SequenceR|470|461|LALGVLLRLL
>sp|SHUT_VZVD|VIRION host shutoff protein|Varicella-zoster virus (strain Dumas)
Query: 3 LGVLLRLL 10
LGVLLRLL
Sbjct: 65 LGVLLRLL 72
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 LALGVLLRLL 10
LA+G+ +RLL
Sbjct: 670 LAVGLFIRLL 679
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 3 LGVLLRLL 10
LGV LRLL
Sbjct: 731 LGVKLRLL 738
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 3 LGVLLRLL 10
LGV LRLL
Sbjct: 731 LGVKLRLL 738
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 3 LGVLLRLL 10
LGV LRLL
Sbjct: 731 LGVKLRLL 738
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 3 LGVLLRLL 10
LGV LRLL
Sbjct: 731 LGVKLRLL 738
>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)
Query: 2 ALGVLLRLL 10
ALGV+ RLL
Sbjct: 384 ALGVIQRLL 392
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 3 LGVLLRLL 10
LGVLLR L
Sbjct: 114 LGVLLREL 121
>sp|VE2_HPV20|REGULATORY protein E2|Human papillomavirus 20
Query: 2 ALGVLLRL 9
A+G++LRL
Sbjct: 72 AIGMVLRL 79
94|SequenceR|475|466|VRLTALALGV
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 2 RLTALALGV 10
R TAL LG+
Sbjct: 622 RHTALGLGI 630
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 2 RLTALALGV 10
R TAL LG+
Sbjct: 621 RHTALGLGI 629
>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)
Query: 1 VRLTALAL 8
VRLTAL L
Sbjct: 499 VRLTALEL 506
>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)
Query: 1 VRLTALAL 8
VRLTAL L
Sbjct: 504 VRLTALEL 511
95|SequenceR|480|471|ALGRLVRLTA
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 LGRLVRLT 9
L RLVRLT
Sbjct: 1197 LDRLVRLT 1204
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 LGRLVRLT 9
L RLVRLT
Sbjct: 1106 LDRLVRLT 1113
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 GRLVRL 8
GRLVRL
Sbjct: 889 GRLVRL 894
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 GRLVRL 8
GRLVRL
Sbjct: 889 GRLVRL 894
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 GRLVRL 8
GRLVRL
Sbjct: 889 GRLVRL 894
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 GRLVRL 8
GRLVRL
Sbjct: 889 GRLVRL 894
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ALGRLVRLTA 10
A GRL R+TA
Sbjct: 307 AQGRLHRMTA 316
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 3 GRLVRLTA 10
GR+V++TA
Sbjct: 732 GRVVKITA 739
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 2 LGRLVRLTA 10
L RLVRLT
Sbjct: 52 LDRLVRLTG 60
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 GRLVRL 8
GRL+RL
Sbjct: 889 GRLIRL 894
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 GRLVRL 8
GRL+RL
Sbjct: 889 GRLIRL 894
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 GRLVRL 8
GRL+RL
Sbjct: 889 GRLIRL 894
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 GRLVRL 8
GRL+RL
Sbjct: 883 GRLIRL 888
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 1 ALGRLV 6
ALGRLV
Sbjct: 93 ALGRLV 98
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 1 ALGRLVR 7
ALG LVR
Sbjct: 51 ALGELVR 57
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 1 ALGRLVRLTA 10
A GRL LTA
Sbjct: 572 AYGRLGELTA 581
96|SequenceR|485|476|PHEPRALGRL
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 1 PHEPRALGRL 10
PH+PR +G L
Sbjct: 117 PHDPRVMGNL 126
>sp|E4RF4_ADE02|EARLY 4 ORF4 protein|Human adenovirus C serotype 2
Query: 3 EPRALGRL 10
EP A GRL
Sbjct: 44 EPEARGRL 51
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PHEPRA 6
PH PR
Sbjct: 1166 PHNPRG 1171
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 1 PHEPRA 6
PH PR
Sbjct: 1166 PHNPRG 1171
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 5 RALGRL 10
RALGRL
Sbjct: 421 RALGRL 426
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 HEPRALGR 9
HEP +GR
Sbjct: 456 HEPPVIGR 463
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 2 HEPRALGR 9
H+P+ +GR
Sbjct: 464 HDPQPVGR 471
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 HEPRALGR 9
HEP +GR
Sbjct: 455 HEPPLIGR 462
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 HEPRALGR 9
HEP +GR
Sbjct: 455 HEPPLIGR 462
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 HEPRALGR 9
HEP +GR
Sbjct: 455 HEPPLIGR 462
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 1 PHEPRAL 7
P+EP+A+
Sbjct: 253 PNEPKAV 259
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 5 RALGRL 10
RALGRL
Sbjct: 92 RALGRL 97
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 2 HEPRALGR 9
HE R +GR
Sbjct: 455 HEQRLIGR 462
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 1 PHEPRALGRL 10
PH R LG+
Sbjct: 79 PHVDRLLGQF 88
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 2 HEPRALGR 9
H+P+ +GR
Sbjct: 464 HDPQPVGR 471
>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)
Query: 2 HEPRALGRL 10
HE R+ GR+
Sbjct: 62 HEARSSGRV 70
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PHEPRA 6
PH+PR+
Sbjct: 529 PHQPRS 534
97|SequenceR|490|481|TPAPPPHEPR
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 2 PAPPPHE 8
P+PPP +
Sbjct: 49 PSPPPRQ 55
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 PAPPPHE 8
P+PPP +
Sbjct: 49 PSPPPRQ 55
>sp|E1BS_ADE41|E1B protein, small T-antigen|Human adenovirus F serotype 41
Query: 1 TPAPPPH 7
+PA PPH
Sbjct: 136 SPAQPPH 142
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 TPAPPPHEPR 10
TP P P P+
Sbjct: 1223 TPPPKPETPQ 1232
>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 PPPHEPR 10
PPP+ PR
Sbjct: 98 PPPYSPR 104
>sp|PG047_VACCC|IMMUNE evasion protein OPG047|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PAPPPHEPR 10
P PP + PR
Sbjct: 301 PIPPMNSPR 309
>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 PPPHEPR 10
PPP+ PR
Sbjct: 98 PPPYSPR 104
>sp|PG047_MONPV|IMMUNE evasion protein OPG047|Monkeypox virus (MPXV)
Query: 2 PAPPPHEPR 10
P PP + PR
Sbjct: 301 PIPPMNSPR 309
>sp|PG047_VACCA|IMMUNE evasion protein OPG047|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PAPPPHEPR 10
P PP + PR
Sbjct: 297 PIPPMNSPR 305
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PAPPPHEPR 10
P+PP PR
Sbjct: 234 PSPPKLPPR 242
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PAPPPHEPR 10
P+PP PR
Sbjct: 234 PSPPKLPPR 242
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 6 PHEPR 10
PH+PR
Sbjct: 117 PHDPR 121
Query: 2 PAPPPHE 8
P P PH+
Sbjct: 453 PCPLPHK 459
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TPAPPPHEP 9
TP PP P
Sbjct: 725 TPRGPPDRP 733
>sp|LMP2_EBVB9|LATENT membrane protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 PPPHEPR 10
PPP+ PR
Sbjct: 98 PPPYSPR 104
>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 TPAPPP 6
TPAPPP
Sbjct: 293 TPAPPP 298
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PAPPP 6
P+PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PAPPP 6
P+PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PAPPP 6
P+PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 PAPPP 6
P+PPP
Sbjct: 1483 PSPPP 1487
>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 PAPPPHEP 9
P P HEP
Sbjct: 72 PLPEDHEP 79
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PAPPP 6
P+PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PAPPP 6
P+PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PAPPP 6
P+PPP
Sbjct: 1483 PSPPP 1487
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 2 PAPPPH 7
P P PH
Sbjct: 461 PCPKPH 466
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 4 PPPH 7
PPPH
Sbjct: 44 PPPH 47
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PAPPP 6
P+PPP
Sbjct: 1073 PSPPP 1077
>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 PAPPPHEP 9
P P HEP
Sbjct: 72 PLPENHEP 79
>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 PAPPPHEP 9
P P HEP
Sbjct: 72 PLPENHEP 79
>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 PAPPPHEP 9
P P HEP
Sbjct: 72 PLPENHEP 79
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 PAPPP 6
P PPP
Sbjct: 2864 PPPPP 2868
>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 PAPPPHEP 9
P P HEP
Sbjct: 72 PLPENHEP 79
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 TPAPPPHE 8
TP+PP E
Sbjct: 1481 TPSPPEVE 1488
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 TPAPPPHE 8
TP+PP E
Sbjct: 1482 TPSPPEVE 1489
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 TPAPPPHE 8
TP+PP E
Sbjct: 1482 TPSPPEVE 1489
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 PAPPPH 7
P PP H
Sbjct: 1771 PGPPSH 1776
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TPAPPPHEP 9
T P P EP
Sbjct: 709 THIPSPREP 717
>sp|SPIKE_ADE12|FIBER protein|Human adenovirus A serotype 12
Query: 1 TPAPPPH 7
TP PPP+
Sbjct: 413 TPDPPPN 419
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 TPAPPPHEPR 10
TP PPP+ R
Sbjct: 2077 TPCPPPNYTR 2086
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 TPAPP 5
TP+PP
Sbjct: 122 TPSPP 126
>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P
Query: 2 PAPPPHEP 9
PAPP H P
Sbjct: 208 PAPPSHVP 215
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 2 PAPPPHEPR 10
P P P EPR
Sbjct: 2284 PTPKPREPR 2292
>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61
Query: 3 APPPHEPR 10
APPP E R
Sbjct: 435 APPPKEDR 442
>sp|NP04_VZVD|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 TPAPPPHE 8
TP P PH+
Sbjct: 199 TPTPTPHQ 206
>sp|NP04_VZVO|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 TPAPPPHE 8
TP P PH+
Sbjct: 199 TPTPTPHQ 206
>sp|VSGP_TAFVC|PRE-SMALL/SECRETED glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 3 APPPHEP 9
+PP HEP
Sbjct: 196 SPPLHEP 202
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 TPAPP 5
TPAPP
Sbjct: 1174 TPAPP 1178
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 1 TPAPPPHEP 9
TP P HEP
Sbjct: 470 TPTGPVHEP 478
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 1 TPAPPPHEP 9
TP P HEP
Sbjct: 470 TPTGPVHEP 478
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 TPAPPPHEP 9
TP P HEP
Sbjct: 470 TPTGPVHEP 478
>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)
Query: 1 TPAPPP 6
TP PPP
Sbjct: 293 TPEPPP 298
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 PPPHEPR 10
P PH+PR
Sbjct: 527 PEPHQPR 533
>sp|GLYC_HRSV3|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 2 PAPPPHEPR 10
P+ PP+ PR
Sbjct: 289 PSSPPNTPR 297
98|SequenceR|495|486|PDDQGTPAPP
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 PDDQGTP 7
P+DQG P
Sbjct: 2074 PEDQGNP 2080
>sp|NP04_VZVO|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PDDQGTPAP 9
PDDQ TP P
Sbjct: 194 PDDQTTPTP 202
>sp|NP04_VZVD|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PDDQGTPAP 9
PDDQ TP P
Sbjct: 194 PDDQTTPTP 202
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 PDDQGTPA 8
PDD G P+
Sbjct: 938 PDDDGQPS 945
>sp|GI_HHV2H|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain HG52)
Query: 1 PDDQGTPAP 9
P D GTPAP
Sbjct: 226 PGDTGTPAP 234
>sp|GI_HHV23|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain 333)
Query: 1 PDDQGTPAP 9
P D GTPAP
Sbjct: 226 PGDTGTPAP 234
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 DDQGTPAPP 10
++QGTP P
Sbjct: 1380 NEQGTPLTP 1388
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 DDQGTPAPP 10
++QGTP P
Sbjct: 1380 NEQGTPLTP 1388
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 DDQGTPAP 9
+ GTPAP
Sbjct: 216 EQNGTPAP 223
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 DDQGTP 7
DD GTP
Sbjct: 2004 DDSGTP 2009
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 DDQGTP 7
DD GTP
Sbjct: 2004 DDSGTP 2009
>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)
Query: 4 QGTPAPP 10
QG PAPP
Sbjct: 488 QGIPAPP 494
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 1 PDDQGTPAP 9
P D TP P
Sbjct: 485 PKDSATPGP 493
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 1 PDDQGTPAP 9
P D TP P
Sbjct: 485 PKDSATPGP 493
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PDDQGTPAP 9
PDD P+P
Sbjct: 224 PDDPTNPSP 232
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PDDQGTPAP 9
PDD P+P
Sbjct: 224 PDDPTNPSP 232
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 4 QGTPAPP 10
+G P PP
Sbjct: 55 RGRPVPP 61
>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12
Query: 1 PDDQGTPAPP 10
PD P PP
Sbjct: 13 PDRSAQPPPP 22
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 DDQGTPAPP 10
D G P PP
Sbjct: 1013 DALGVPFPP 1021
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 GTPAPP 10
TP+PP
Sbjct: 121 ATPSPP 126
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 2 DDQGTPAP 9
DDQG P P
Sbjct: 56 DDQGQPLP 63
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 1 PDDQGTPAP 9
PD++G P P
Sbjct: 263 PDEKGVPLP 271
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 6 TPAPP 10
TP+PP
Sbjct: 1481 TPSPP 1485
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 6 TPAPP 10
TP+PP
Sbjct: 1482 TPSPP 1486
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 DDQGTPAPP 10
+D G P PP
Sbjct: 946 NDGGFPLPP 954
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 6 TPAPP 10
TP+PP
Sbjct: 1482 TPSPP 1486
>sp|UL24_HHV8P|PROTEIN UL24 homolog|Human herpesvirus 8 type P
Query: 2 DDQGTPAPP 10
D+GTPA P
Sbjct: 240 KDKGTPAFP 248
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 2 DDQGTPAPP 10
+D G P PP
Sbjct: 946 NDGGFPLPP 954
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 DDQGTPAP 9
DD G PAP
Sbjct: 2585 DDSGGPAP 2592
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 5 GTPAPP 10
G P PP
Sbjct: 617 GDPMPP 622
99|SequenceR|504|491|CPAPLLQSQPDDQG
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 1 CPAPLLQSQPDD 12
CP P ++SQP D
Sbjct: 770 CPEPEVESQPLD 781
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 CPAPLLQSQPDD 12
CP P ++SQP D
Sbjct: 770 CPEPEVESQPLD 781
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 CPAPLLQSQPDD 12
CP P +++QP D
Sbjct: 771 CPEPKIEAQPLD 782
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 4 PLLQSQPDDQG 14
P + S+PDD+G
Sbjct: 135 PAIDSRPDDEG 145
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 CPAPLLQSQPDD 12
CP P +++QP D
Sbjct: 771 CPEPKIEAQPLD 782
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 4 PLLQSQPDDQG 14
P + S+PDD+G
Sbjct: 135 PAIDSRPDDEG 145
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 CPAPLLQSQPDD 12
CP P ++QP D
Sbjct: 770 CPEPEAETQPLD 781
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 CPAPLLQSQPDD 12
CP P ++QP D
Sbjct: 770 CPEPEAETQPLD 781
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 CPAPLLQSQPDD 12
CP P ++QP D
Sbjct: 770 CPEPEAETQPLD 781
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 CPAPLLQSQPDD 12
CPA S+PDD
Sbjct: 172 CPAIENPSEPDD 183
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 CPAPLLQSQPDD 12
CP P ++QP D
Sbjct: 770 CPEPEAETQPLD 781
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 3 APLLQSQPDDQG 14
P + S+PDD+G
Sbjct: 132 VPAIDSRPDDEG 143
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 4 PLLQSQPDDQG 14
P + S+P+D+G
Sbjct: 133 PAIDSRPEDEG 143
>sp|VFUS_ORFN2|10 kDa fusion protein|Orf virus (strain NZ2) (OV
Query: 6 LQSQPDDQG 14
L +QPDD G
Sbjct: 9 LLTQPDDTG 17
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PLLQSQPD 11
PLL +QPD
Sbjct: 186 PLLTTQPD 193
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PLLQSQPD 11
PLL +QPD
Sbjct: 186 PLLTTQPD 193
>sp|U15_HHV6U|UNCHARACTERIZED protein U15|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 CPAPLLQS 8
CP P+L S
Sbjct: 16 CPLPVLMS 23
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 4 PLLQSQPDD 12
P++ S PDD
Sbjct: 529 PIITSIPDD 537
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CPAPLLQSQPDD 12
CP P ++ DD
Sbjct: 721 CPEPTVEVLDDD 732
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 4 PLLQSQPDDQ 13
P+ Q PDDQ
Sbjct: 2519 PVYQRAPDDQ 2528
Query: 1 CPAPLLQSQPDDQG 14
PAP PDD G
Sbjct: 976 VPAPGASPYPDDGG 989
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 CPAPLLQSQPDD 12
CP P ++ DD
Sbjct: 721 CPEPTVEVLDDD 732
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 3 APLLQSQP 10
AP+L SQP
Sbjct: 304 APVLDSQP 311
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 3 APLLQSQP 10
AP+L SQP
Sbjct: 302 APVLDSQP 309
>sp|FUS_PI1HC|FUSION glycoprotein F0|Human parainfluenza 1 virus (strain
Query: 1 CPAPLLQSQPDDQ 13
CP Q PD+Q
Sbjct: 343 CPRDPTQLIPDNQ 355
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 2 PAPLLQSQP 10
PA LLQ QP
Sbjct: 815 PATLLQPQP 823
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PAPLLQSQP 10
PA LLQ QP
Sbjct: 816 PATLLQPQP 824
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 LLQSQPDDQG 14
++Q+QPD G
Sbjct: 1092 IIQAQPDRSG 1101
>sp|FUS_PI3H4|FUSION glycoprotein F0|Human parainfluenza 3 virus (strain
Query: 8 SQPDDQG 14
+QP DQG
Sbjct: 402 NQPPDQG 408
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 APLLQSQPDDQG 14
AP+ + PDD+
Sbjct: 1697 APIPEPTPDDRA 1708
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 4 PLLQSQPDDQG 14
P + S+P D+G
Sbjct: 133 PAIDSRPVDEG 143
>sp|MATRX_RABVB|MATRIX protein|Rabies virus (strain silver-haired bat-associated)
Query: 4 PLLQSQPDD 12
PL+ + PDD
Sbjct: 20 PLVSAPPDD 28
>sp|MATRX_ABLVH|MATRIX protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 4 PLLQSQPDD 12
PL+ + PDD
Sbjct: 20 PLVSAPPDD 28
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 7 QSQPDDQ 13
+S+PDDQ
Sbjct: 568 ESEPDDQ 574
>sp|REX_HTL32|PROTEIN Rex|Human T-cell leukemia virus 3
Query: 1 CPAPLLQSQPDDQ 13
CP+P L S P
Sbjct: 151 CPSPTLGSDPKTS 163
>sp|GE_HHV2H|ENVELOPE glycoprotein E|Human herpesvirus 2 (strain HG52)
Query: 2 PAPLLQSQPDD 12
PAP+ PDD
Sbjct: 161 PAPVPTPTPDD 171
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 7 QSQPDDQG 14
+S+P DQG
Sbjct: 565 ESRPSDQG 572
THE END