1|Sequence|1|10|MSQPRTPEQA
>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea
Query: 1 MSQPRTPE 8
MSQPRT E
Sbjct: 3 MSQPRTRE 10
>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New
Query: 1 MSQPRTPE 8
MSQPRT E
Sbjct: 11 MSQPRTRE 18
>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)
Query: 4 PRTPEQA 10
PRTPE+A
Sbjct: 342 PRTPEKA 348
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 3 QPRTPE 8
+PR+PE
Sbjct: 604 EPRSPE 609
>sp|VE6_HPV30|PROTEIN E6|Human papillomavirus 30
Query: 3 QPRTPEQ 9
QP TPE+
Sbjct: 111 QPLTPEE 117
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 SQPRTPEQ 9
+QP TP Q
Sbjct: 324 NQPETPVQ 331
>sp|TAT_HV1MA|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 SQPRTP 7
SQPRTP
Sbjct: 16 SQPRTP 21
>sp|TAT_HV1EL|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 SQPRTP 7
SQPRTP
Sbjct: 16 SQPRTP 21
>sp|U24_HHV6Z|U24 protein|Human herpesvirus 6B (strain Z29)
Query: 1 MSQPRTP 7
M +PRTP
Sbjct: 1 MDRPRTP 7
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 2 SQPRTPE 8
PRTPE
Sbjct: 137 GNPRTPE 143
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 2 SQPRTPE 8
PRTPE
Sbjct: 137 GNPRTPE 143
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 QPRTPE 8
QPR+P+
Sbjct: 244 QPRSPQ 249
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 QPRTPE 8
QPR+P+
Sbjct: 244 QPRSPQ 249
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 1 MSQPRTP 7
++QPR P
Sbjct: 326 LAQPRVP 332
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 MSQPRTP 7
++QPR P
Sbjct: 326 LAQPRAP 332
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 MSQPRTP 7
++QPR P
Sbjct: 326 LAQPRAP 332
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 QPRTPEQA 10
QP TP+Q
Sbjct: 301 QPGTPQQG 308
2|Sequence|6|15|TPEQALDTPG
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 TPEQALDT 8
TPE+ LD+
Sbjct: 1560 TPEETLDS 1567
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 2 PEQALDTP 9
P+Q + TP
Sbjct: 606 PKQTIQTP 613
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 2 PEQALDTP 9
P+Q + TP
Sbjct: 606 PKQTIQTP 613
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 PEQALDTP 9
P+Q + TP
Sbjct: 606 PKQTIQTP 613
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 2 PEQALDTP 9
P+Q + TP
Sbjct: 606 PKQTIQTP 613
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PEQALDTP 9
P+Q + TP
Sbjct: 606 PKQTIQTP 613
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 2 PEQALDTP 9
P+Q + TP
Sbjct: 606 PKQTIQTP 613
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 EQALDTPG 10
E A+D PG
Sbjct: 2061 ENAIDGPG 2068
>sp|TAT_HV2KR|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 1 TPEQALDT 8
TPE AL+T
Sbjct: 117 TPETALET 124
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 1 TPEQALDTPG 10
TPE L +PG
Sbjct: 228 TPEAILFSPG 237
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 2 PEQALDTP 9
P QA+D P
Sbjct: 579 PSQAIDDP 586
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 1 TPEQALDTPG 10
+PE+ L PG
Sbjct: 233 SPEEQLTAPG 242
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 1 TPEQALDTPG 10
+PE+ L PG
Sbjct: 230 SPEEQLTAPG 239
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 1 TPEQALDTPG 10
TPE L +PG
Sbjct: 230 TPEAILFSPG 239
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 TPEQALDTPG 10
TP A++ PG
Sbjct: 243 TPNIAINQPG 252
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PEQALDT 8
PE +LDT
Sbjct: 684 PESSLDT 690
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 PEQALDT 8
PE +LDT
Sbjct: 684 PESSLDT 690
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PEQALDT 8
PE +LDT
Sbjct: 684 PESSLDT 690
3|Sequence|11|20|LDTPGDCPPG
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 3 TPGDCPP 9
TPGDCPP
Sbjct: 182 TPGDCPP 188
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 4 PGDCPP 9
PGDCPP
Sbjct: 179 PGDCPP 184
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 4 PGDCPP 9
PGDCPP
Sbjct: 183 PGDCPP 188
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 4 PGDCPP 9
PG CPP
Sbjct: 1622 PGTCPP 1627
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 4 PGDCPP 9
PG CPP
Sbjct: 1622 PGTCPP 1627
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 4 PGDCPP 9
PG CPP
Sbjct: 1622 PGACPP 1627
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 3 TPGDCPP 9
+PGDCPP
Sbjct: 208 SPGDCPP 214
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 3 TPGDCPP 9
T GDCPP
Sbjct: 215 TTGDCPP 221
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 4 PGDCPP 9
PGDCPP
Sbjct: 211 PGDCPP 216
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 4 PGDCPP 9
PGDCPP
Sbjct: 182 PGDCPP 187
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 4 PGDCPP 9
PGDCPP
Sbjct: 182 PGDCPP 187
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 3 TPGDCPP 9
T GDCPP
Sbjct: 179 TAGDCPP 185
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 4 PGDCPP 9
PGDCPP
Sbjct: 181 PGDCPP 186
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 4 PGDCPP 9
PGDCPP
Sbjct: 209 PGDCPP 214
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 4 PGDCPP 9
PG CPP
Sbjct: 184 PGSCPP 189
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 4 PGDCPP 9
PG CPP
Sbjct: 182 PGSCPP 187
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 4 PGDCPP 9
PG CPP
Sbjct: 184 PGSCPP 189
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 TPGDCPP 9
+PGD PP
Sbjct: 419 SPGDSPP 425
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 TPGDCPP 9
+PGD PP
Sbjct: 419 SPGDSPP 425
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 4 PGDCP 8
PGDCP
Sbjct: 770 PGDCP 774
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 TPGDCP 8
TP DCP
Sbjct: 1212 TPPDCP 1217
>sp|VP2_POVKI|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 350)
Query: 2 DTPGDCPP 9
D PGD PP
Sbjct: 98 DHPGDLPP 105
>sp|VP2_POVK6|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 60)
Query: 2 DTPGDCPP 9
D PGD PP
Sbjct: 98 DHPGDLPP 105
>sp|VP2_POVK3|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 380)
Query: 2 DTPGDCPP 9
D PGD PP
Sbjct: 98 DHPGDLPP 105
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 5 GDCPP 9
GDCPP
Sbjct: 179 GDCPP 183
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LDTPGDCP 8
L+ PG CP
Sbjct: 345 LEVPGRCP 352
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 5 GDCPP 9
GDCPP
Sbjct: 184 GDCPP 188
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LDTPGDCP 8
L+ PG CP
Sbjct: 345 LEVPGRCP 352
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 4 PGDCPP 9
PG CPP
Sbjct: 212 PGACPP 217
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 5 GDCPP 9
GDCPP
Sbjct: 190 GDCPP 194
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 5 GDCPP 9
GDCPP
Sbjct: 180 GDCPP 184
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 3 TPGDCPPG 10
T GDC PG
Sbjct: 631 TSGDCDPG 638
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 4 PGDCPP 9
PGDC P
Sbjct: 140 PGDCGP 145
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 4 PGDCPP 9
PGDC P
Sbjct: 140 PGDCGP 145
>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain
Query: 1 LDTPGDC 7
L PGDC
Sbjct: 29 LHKPGDC 35
>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate
Query: 1 LDTPGDC 7
L PGDC
Sbjct: 29 LHKPGDC 35
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 5 GDCPP 9
GDCPP
Sbjct: 182 GDCPP 186
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 5 GDCPP 9
GDCPP
Sbjct: 179 GDCPP 183
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 5 GDCPP 9
GDCPP
Sbjct: 179 GDCPP 183
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 3 TPGDCP 8
+PGDCP
Sbjct: 179 SPGDCP 184
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 5 GDCPP 9
GDCPP
Sbjct: 180 GDCPP 184
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 LDTPGDC 7
L PGDC
Sbjct: 961 LSEPGDC 967
>sp|VL2_HPV41|MINOR capsid protein L2|Human papillomavirus type 41
Query: 3 TPGDCPP 9
T GDCPP
Sbjct: 22 TGGDCPP 28
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 3 TPGDC 7
TPGDC
Sbjct: 1143 TPGDC 1147
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 DTPGDC 7
DTP DC
Sbjct: 535 DTPTDC 540
Query: 4 PGDC 7
PGDC
Sbjct: 969 PGDC 972
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 3 TPGDCPP 9
+ GDCPP
Sbjct: 180 STGDCPP 186
>sp|UL38_HHV6U|APOPTOSIS inhibitor U19|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 TPGDCPP 9
TP +C P
Sbjct: 363 TPSECKP 369
>sp|UL56_HHV2H|PROTEIN UL56|Human herpesvirus 2 (strain HG52)
Query: 1 LDTPGDCPP 9
+DTP D PP
Sbjct: 42 IDTPTDSPP 50
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 TPGDCPP 9
TPG PP
Sbjct: 434 TPGIIPP 440
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 TPGDCPP 9
TPG PP
Sbjct: 434 TPGIIPP 440
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 TPGDCPP 9
TPG PP
Sbjct: 434 TPGIIPP 440
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 TPGDCPP 9
TPG PP
Sbjct: 434 TPGIIPP 440
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 3 TPGDCPP 9
TPG PP
Sbjct: 434 TPGIIPP 440
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 TPGDCPP 9
TPG PP
Sbjct: 434 TPGVIPP 440
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 3 TPGDCPP 9
TPG PP
Sbjct: 434 TPGVIPP 440
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 TPGDCPP 9
TPG PP
Sbjct: 434 TPGVIPP 440
>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 TPGDCPP 9
TPG PP
Sbjct: 434 TPGVIPP 440
>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 TPGDCPP 9
TPG PP
Sbjct: 434 TPGVIPP 440
>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 TPGDCPP 9
TPG PP
Sbjct: 434 TPGVIPP 440
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 TPGDCPP 9
TPG PP
Sbjct: 434 TPGVIPP 440
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 5 GDCPP 9
GDCPP
Sbjct: 182 GDCPP 186
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 5 GDCPP 9
GDCPP
Sbjct: 195 GDCPP 199
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 5 GDCPP 9
GDCPP
Sbjct: 183 GDCPP 187
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 3 TPGDCPP 9
+ GDCPP
Sbjct: 242 SQGDCPP 248
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 5 GDCPP 9
GDCPP
Sbjct: 182 GDCPP 186
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 5 GDCPP 9
GDCPP
Sbjct: 289 GDCPP 293
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 5 GDCPP 9
GDCPP
Sbjct: 181 GDCPP 185
>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 PGDCP 8
P DCP
Sbjct: 270 PKDCP 274
>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 PGDCP 8
P DCP
Sbjct: 270 PKDCP 274
>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 PGDCP 8
P DCP
Sbjct: 270 PKDCP 274
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 5 GDCPP 9
GDCPP
Sbjct: 183 GDCPP 187
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 5 GDCPP 9
GDCPP
Sbjct: 210 GDCPP 214
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 4 PGDCP 8
P DCP
Sbjct: 767 PADCP 771
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 LDTPGDC 7
++TPG C
Sbjct: 337 MNTPGSC 343
Query: 4 PGDC 7
PGDC
Sbjct: 958 PGDC 961
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 LDTPGDC 7
++TPG C
Sbjct: 337 MNTPGSC 343
Query: 4 PGDC 7
PGDC
Sbjct: 958 PGDC 961
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 TPGDC 7
+PGDC
Sbjct: 983 SPGDC 987
>sp|UL38_HHV6H|APOPTOSIS inhibitor U19|Human herpesvirus 6B (HHV-6 variant
Query: 3 TPGDCPP 9
TP +C P
Sbjct: 363 TPSECKP 369
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 TPGDC 7
+PGDC
Sbjct: 986 SPGDC 990
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 3 TPGDC 7
+PGDC
Sbjct: 983 SPGDC 987
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LDTPGDCP 8
L+T G CP
Sbjct: 47 LETDGICP 54
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LDTPGDCP 8
L+T G CP
Sbjct: 47 LETDGICP 54
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 TPGDC 7
+PGDC
Sbjct: 984 SPGDC 988
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 TPGDC 7
+PGDC
Sbjct: 986 SPGDC 990
>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8
Query: 3 TPGDCPPG 10
TP PPG
Sbjct: 202 TPPGSPPG 209
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 TPGDC 7
+PGDC
Sbjct: 984 SPGDC 988
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 5 GDCP 8
GDCP
Sbjct: 1025 GDCP 1028
>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61
Query: 4 PGDCPP 9
P DCPP
Sbjct: 183 PTDCPP 188
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 4 PGDCP 8
P DCP
Sbjct: 767 PSDCP 771
>sp|NRAM_I33A0|NEURAMINIDASE A virus (strain A/Wilson-Smith/1933
Query: 2 DTPGDCPP 9
D PG C P
Sbjct: 314 DGPGSCGP 321
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 4 PGDCP 8
P DCP
Sbjct: 767 PSDCP 771
>sp|VP22_VZVO|TEGUMENT protein VP22|Varicella-zoster virus (strain Oka vaccine)
Query: 2 DTPGDCPPG 10
D+P PPG
Sbjct: 138 DSPKRAPPG 146
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 DTPGDCPP 9
DTP PP
Sbjct: 1677 DTPNCLPP 1684
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 4 PGDCP 8
P DCP
Sbjct: 766 PSDCP 770
>sp|VP22_VZVD|TEGUMENT protein VP22|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 DTPGDCPPG 10
D+P PPG
Sbjct: 138 DSPKRAPPG 146
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 3 TPGDCP 8
T GDCP
Sbjct: 207 TQGDCP 212
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 4 PGDC 7
PGDC
Sbjct: 956 PGDC 959
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 4 PGDC 7
PGDC
Sbjct: 956 PGDC 959
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 DTPGDC 7
+TP DC
Sbjct: 534 ETPSDC 539
Query: 4 PGDC 7
PGDC
Sbjct: 976 PGDC 979
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 DTPGDC 7
+TP DC
Sbjct: 534 ETPSDC 539
Query: 4 PGDC 7
PGDC
Sbjct: 966 PGDC 969
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 4 PGDC 7
PGDC
Sbjct: 957 PGDC 960
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1203 DCSPG 1207
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1202 DCSPG 1206
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 4 PGDC 7
PGDC
Sbjct: 971 PGDC 974
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 4 PGDC 7
PGDC
Sbjct: 967 PGDC 970
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 4 PGDC 7
PGDC
Sbjct: 960 PGDC 963
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 4 PGDC 7
PGDC
Sbjct: 957 PGDC 960
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 4 PGDC 7
PGDC
Sbjct: 955 PGDC 958
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 4 PGDC 7
PGDC
Sbjct: 985 PGDC 988
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 2 DTPGDCPP 9
D PG PP
Sbjct: 532 DVPGPRPP 539
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 2 DTPGDCPP 9
D PG PP
Sbjct: 532 DVPGPRPP 539
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 4 PGDC 7
PGDC
Sbjct: 966 PGDC 969
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 4 PGDC 7
PGDC
Sbjct: 974 PGDC 977
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 4 PGDC 7
PGDC
Sbjct: 968 PGDC 971
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 4 PGDC 7
PGDC
Sbjct: 992 PGDC 995
>sp|VP2_POVWU|MINOR capsid protein VP2|WU polyomavirus (WUPyV)
Query: 2 DTPGDCP 8
D PGD P
Sbjct: 98 DRPGDLP 104
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1201 DCSPG 1205
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1202 DCSPG 1206
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1207 DCSPG 1211
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1214 DCSPG 1218
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1202 DCSPG 1206
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1214 DCSPG 1218
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1197 DCSPG 1201
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 4 PGDC 7
PGDC
Sbjct: 958 PGDC 961
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 PGDC 7
PGDC
Sbjct: 2240 PGDC 2243
Query: 1 LDTPGDCP 8
L PGD P
Sbjct: 1200 LGIPGDVP 1207
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 4 PGDC 7
PGDC
Sbjct: 953 PGDC 956
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 4 PGDC 7
PGDC
Sbjct: 960 PGDC 963
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1202 DCSPG 1206
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 PGDC 7
PGDC
Sbjct: 2248 PGDC 2251
Query: 1 LDTPGDCP 8
L PGD P
Sbjct: 1200 LGIPGDVP 1207
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1204 DCSPG 1208
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 TPGDC 7
TPG C
Sbjct: 1287 TPGSC 1291
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1197 DCSPG 1201
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1208 DCSPG 1212
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1202 DCSPG 1206
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1206 DCSPG 1210
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1214 DCSPG 1218
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1198 DCSPG 1202
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1202 DCSPG 1206
>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P
Query: 3 TPGDCPPG 10
+PG C PG
Sbjct: 227 SPGQCLPG 234
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 PGDC 7
PGDC
Sbjct: 2248 PGDC 2251
Query: 1 LDTPGDCP 8
L PGD P
Sbjct: 1200 LGIPGDVP 1207
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 4 PGDC 7
PGDC
Sbjct: 960 PGDC 963
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1203 DCSPG 1207
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1201 DCSPG 1205
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1202 DCSPG 1206
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 4 PGDCP 8
P DCP
Sbjct: 766 PPDCP 770
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1195 DCSPG 1199
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1199 DCSPG 1203
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1203 DCSPG 1207
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 4 PGDC 7
PGDC
Sbjct: 969 PGDC 972
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 4 PGDC 7
PGDC
Sbjct: 969 PGDC 972
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 4 PGDC 7
PGDC
Sbjct: 956 PGDC 959
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1199 DCSPG 1203
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1197 DCSPG 1201
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1200 DCSPG 1204
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1199 DCSPG 1203
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 4 PGDCP 8
P DCP
Sbjct: 765 PPDCP 769
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1197 DCSPG 1201
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1197 DCSPG 1201
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 4 PGDC 7
PGDC
Sbjct: 969 PGDC 972
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 4 PGDC 7
PGDC
Sbjct: 969 PGDC 972
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 4 PGDCP 8
P DCP
Sbjct: 765 PPDCP 769
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 4 PGDCPPG 10
PGD P G
Sbjct: 328 PGDKPSG 334
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 4 PGDCP 8
P DCP
Sbjct: 765 PPDCP 769
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 TPGDC 7
TPGDC
Sbjct: 364 TPGDC 368
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 4 PGDC 7
PGDC
Sbjct: 961 PGDC 964
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 4 PGDC 7
PGDC
Sbjct: 962 PGDC 965
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 DCPPG 10
DC PG
Sbjct: 1202 DCSPG 1206
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 4 PGDC 7
PGDC
Sbjct: 969 PGDC 972
4|Sequence|16|25|DCPPGRRDED
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC GR+DED
Sbjct: 1426 DCVAGRQDED 1435
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC GR+DED
Sbjct: 1425 DCVAGRQDED 1434
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC GR+DED
Sbjct: 1420 DCVAGRQDED 1429
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC GR+DED
Sbjct: 1421 DCVAGRQDED 1430
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC GR+DED
Sbjct: 1421 DCVAGRQDED 1430
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC GR+DED
Sbjct: 1421 DCVAGRQDED 1430
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC GR+DED
Sbjct: 1427 DCVAGRQDED 1436
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC GR+DED
Sbjct: 1430 DCVAGRQDED 1439
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC GR+DED
Sbjct: 1421 DCVAGRQDED 1430
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC GR+DED
Sbjct: 1419 DCMAGRQDED 1428
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC GR+DED
Sbjct: 1424 DCVAGRQDED 1433
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC GR+DED
Sbjct: 1426 DCVAGRQDED 1435
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC GR+DED
Sbjct: 1423 DCVAGRQDED 1432
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC GR+DED
Sbjct: 1423 DCVAGRQDED 1432
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC R+DED
Sbjct: 1427 DCVASRQDED 1436
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC R+DED
Sbjct: 1438 DCVASRQDED 1447
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC R+DED
Sbjct: 1438 DCVASRQDED 1447
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC R+DED
Sbjct: 1426 DCVASRQDED 1435
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC R+DED
Sbjct: 1428 DCVASRQDED 1437
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC R+DED
Sbjct: 1438 DCVASRQDED 1447
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 2 CPPGRR 7
CPPG R
Sbjct: 429 CPPGER 434
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC R+DED
Sbjct: 1426 DCVASRQDED 1435
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC R+DED
Sbjct: 1426 DCVASRQDED 1435
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC R+DED
Sbjct: 1426 DCVASRQDED 1435
>sp|PHOSP_RABVH|PHOSPHOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 3 PPGRRDED 10
PPGR ED
Sbjct: 136 PPGRSSED 143
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC R+DED
Sbjct: 1427 DCVASRQDED 1436
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC R+DED
Sbjct: 1425 DCVASRQDED 1434
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC R+DED
Sbjct: 1423 DCVASRQDED 1432
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC R+DED
Sbjct: 1426 DCVASRQDED 1435
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC R+DED
Sbjct: 1430 DCVASRQDED 1439
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC R+DED
Sbjct: 1432 DCVASRQDED 1441
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC R+DED
Sbjct: 1422 DCMASRQDED 1431
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC R+DED
Sbjct: 1426 DCVASRQDED 1435
>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)
Query: 2 CPPGRRD 8
CP G RD
Sbjct: 446 CPSGNRD 452
>sp|PHOSP_RABVI|PHOSPHOPROTEIN virus (strain India) (RABV)
Query: 3 PPGRRDED 10
PPGR ED
Sbjct: 136 PPGRSSED 143
>sp|VPX_HV2D2|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 3 PPGRRDED 10
PPG DE+
Sbjct: 8 PPGNSDEE 15
>sp|POL_HV1Z6|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC R+DED
Sbjct: 139 DCVASRQDED 148
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DCPPGRRDED 10
DC G +DED
Sbjct: 1431 DCVAGGQDED 1440
>sp|VPX_HV2UC|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 3 PPGRRDED 10
PPG DE+
Sbjct: 8 PPGNSDEE 15
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 2 CPPGRRDE 9
C P RRD+
Sbjct: 2195 CRPFRRDQ 2202
>sp|VIF_HV1AN|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 4 PGRRDE 9
PG RDE
Sbjct: 74 PGERDE 79
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 CPPG 5
CPPG
Sbjct: 4287 CPPG 4290
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 2 CPPGRR 7
CP GRR
Sbjct: 313 CPQGRR 318
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 DCPPG 5
+CPPG
Sbjct: 292 NCPPG 296
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 DCPPG 5
+CPPG
Sbjct: 292 NCPPG 296
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 DCPPG 5
+CPPG
Sbjct: 292 NCPPG 296
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 DCPPG 5
+CPPG
Sbjct: 292 NCPPG 296
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 1 DCPPGRRDE 9
D P GR DE
Sbjct: 205 DLPVGREDE 213
>sp|PHOSP_RABVS|PHOSPHOPROTEIN virus (strain SAD B19)
Query: 3 PPGRRDED 10
PPG+ ED
Sbjct: 136 PPGKSSED 143
>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins
Query: 2 CPPGR 6
CPPG+
Sbjct: 271 CPPGQ 275
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 2 CPPGR 6
CPPG+
Sbjct: 271 CPPGQ 275
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 2 CPPGR 6
CPPG+
Sbjct: 271 CPPGQ 275
>sp|VE2_HPV12|REGULATORY protein E2|Human papillomavirus 12
Query: 4 PGRRDED 10
PG+RD D
Sbjct: 207 PGQRDPD 213
>sp|PHOSP_RABVM|PHOSPHOPROTEIN virus (strain PM) (RABV)
Query: 3 PPGRRDED 10
PPG+ ED
Sbjct: 136 PPGKSSED 143
>sp|PHOSP_RABVE|PHOSPHOPROTEIN virus (strain ERA) (RABV)
Query: 3 PPGRRDED 10
PPG+ ED
Sbjct: 136 PPGKSSED 143
>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8
Query: 3 PPGRRDED 10
PPG+ D D
Sbjct: 207 PPGQADTD 214
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 2 CPPGR 6
CPPGR
Sbjct: 9 CPPGR 13
>sp|PHOSP_RABVP|PHOSPHOPROTEIN virus (strain Pasteur vaccins
Query: 3 PPGRRDED 10
PPG+ ED
Sbjct: 136 PPGKSSED 143
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DCPPGRR 7
DCP GR+
Sbjct: 350 DCPKGRQ 356
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DCPPGRR 7
DCP GR+
Sbjct: 350 DCPKGRQ 356
>sp|NS1_I61A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 4 PGRRDED 10
PG DED
Sbjct: 167 PGHTDED 173
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 2 CPPG 5
CPPG
Sbjct: 433 CPPG 436
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 GRRDED 10
GRR+ED
Sbjct: 346 GRRNED 351
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 2 CPPG 5
CPPG
Sbjct: 433 CPPG 436
>sp|NS1_I67A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 4 PGRRDED 10
PG DED
Sbjct: 167 PGHTDED 173
>sp|CEP2_HHV2H|CYTOPLASMIC envelopment protein 2|Human herpesvirus 2 (strain HG52)
Query: 2 CPPGRR 7
CPPG R
Sbjct: 219 CPPGSR 224
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 2 CPPG 5
CPPG
Sbjct: 438 CPPG 441
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 CPPG 5
CPPG
Sbjct: 427 CPPG 430
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 CPPG 5
CPPG
Sbjct: 427 CPPG 430
>sp|CEP2_HHV11|CYTOPLASMIC envelopment protein 2|Human herpesvirus 1 (strain 17)
Query: 2 CPPGRR 7
CPPG R
Sbjct: 221 CPPGSR 226
>sp|NS1_I30A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 4 PGRRDED 10
PG DED
Sbjct: 167 PGHTDED 173
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 DCPPGRRDED 10
DC G D+D
Sbjct: 51 DCVTGINDDD 60
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 DCPPGRRDED 10
DC G D+D
Sbjct: 51 DCVTGINDDD 60
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 CPPG 5
CPPG
Sbjct: 427 CPPG 430
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 2 CPPG 5
CPPG
Sbjct: 437 CPPG 440
>sp|DYR_HHV8P|PUTATIVE Dihydrofolate reductase|Human herpesvirus 8 type P
Query: 1 DCPPGRRD 8
DC PG+++
Sbjct: 41 DCAPGKQN 48
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 2 CPPG 5
CPPG
Sbjct: 433 CPPG 436
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 CPPG 5
CPPG
Sbjct: 426 CPPG 429
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 2 CPPG 5
CPPG
Sbjct: 438 CPPG 441
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 2 CPPG 5
CPPG
Sbjct: 424 CPPG 427
>sp|VE2_HPV19|REGULATORY protein E2|Human papillomavirus 19
Query: 1 DCPPGRRDED 10
D P G+RD +
Sbjct: 205 DSPGGQRDPN 214
>sp|NS1_I02A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 PGRRDED 10
PG DED
Sbjct: 167 PGHTDED 173
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 2 CPPG 5
CPPG
Sbjct: 437 CPPG 440
>sp|NS1_I02A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Guinea
Query: 4 PGRRDED 10
PG DED
Sbjct: 167 PGHTDED 173
>sp|CRMB_MONPV|SOLUBLE TNF receptor II|Monkeypox virus (MPXV)
Query: 2 CPPG 5
CPPG
Sbjct: 47 CPPG 50
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 2 CPPGRRDE 9
PPGR+ E
Sbjct: 148 APPGRQTE 155
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 2 CPPGRRDE 9
PPGR+ E
Sbjct: 148 APPGRQTE 155
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 2 CPPG 5
CPPG
Sbjct: 439 CPPG 442
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 CPPG 5
CPPG
Sbjct: 425 CPPG 428
>sp|NS1_I02A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 4 PGRRDED 10
PG DED
Sbjct: 167 PGHTDED 173
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 2 CPPGRRDE 9
PPGR+ E
Sbjct: 147 APPGRQTE 154
>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)
Query: 2 CPPGRRDE 9
PPGR+ E
Sbjct: 147 APPGRQTE 154
>sp|CRMB_VARV|CYTOKINE response-modifying protein B|Variola virus
Query: 2 CPPG 5
CPPG
Sbjct: 47 CPPG 50
>sp|CRMB_VAR67|CYTOKINE response-modifying protein B|Variola virus (isolate
Query: 2 CPPG 5
CPPG
Sbjct: 47 CPPG 50
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 2 CPPG 5
CPPG
Sbjct: 439 CPPG 442
>sp|NS1_I02A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 PGRRDED 10
PG DED
Sbjct: 167 PGHTDED 173
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 CPPG 5
CPPG
Sbjct: 381 CPPG 384
>sp|NS1_I33A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Wilson-Smith/1933
Query: 4 PGRRDED 10
PG DED
Sbjct: 167 PGHTDED 173
>sp|CRMB_CWPXG|SOLUBLE TNF receptor II|Cowpox virus (strain GRI-90 /
Query: 2 CPPG 5
CPPG
Sbjct: 47 CPPG 50
>sp|VE8E2_HPV08|PROTEIN E8^E2C|Human papillomavirus type 8
Query: 3 PPGRRDED 10
PPG+ D D
Sbjct: 16 PPGQADTD 23
>sp|NS1_I18A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Brevig
Query: 4 PGRRDED 10
PG DED
Sbjct: 167 PGHTDED 173
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 2 CPPG 5
CPPG
Sbjct: 105 CPPG 108
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 DCPPGRRDE 9
+C P RDE
Sbjct: 2140 ECKPILRDE 2148
>sp|NS1_I05A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 4 PGRRDED 10
PG DED
Sbjct: 158 PGHTDED 164
>sp|NS1_I02A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 4 PGRRDED 10
PG DED
Sbjct: 167 PGHTDED 173
5|Sequence|21|30|RRDEDAGEGI
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 1 RRDEDAGEGI 10
RR+ DAGE +
Sbjct: 750 RREGDAGEAM 759
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 3 DEDAGEGI 10
DED GE I
Sbjct: 766 DEDEGENI 773
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 3 DEDAGEGI 10
DED GE I
Sbjct: 766 DEDEGENI 773
>sp|DUT_HHV11|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 1 (strain 17)
Query: 1 RRDEDAG 7
+R+EDAG
Sbjct: 214 KREEDAG 220
>sp|VIF_HV1AN|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 RDEDAGEGI 10
RDE G G+
Sbjct: 77 RDEHLGHGV 85
>sp|DUT_HHV2H|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 2 (strain
Query: 1 RRDEDAG 7
+R+EDAG
Sbjct: 212 KREEDAG 218
>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49
Query: 3 DEDAGEG 9
D DAG+G
Sbjct: 178 DADAGQG 184
>sp|REV_HV197|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 DEDAGEG 9
DED+G+G
Sbjct: 86 DEDSGQG 92
>sp|MATRX_RABVS|MATRIX protein|Rabies virus (strain SAD B19)
Query: 1 RRDED 5
RRDED
Sbjct: 11 RRDED 15
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 3 DEDAGEG 9
D D GEG
Sbjct: 180 DNDEGEG 186
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 3 DEDAGEG 9
DED G G
Sbjct: 201 DEDTGSG 207
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 1 RRDEDAGEG 9
R+D D G G
Sbjct: 164 RQDADEGSG 172
>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41
Query: 1 RRDEDAGEGI 10
RR+E+ GE +
Sbjct: 228 RRNEETGEPV 237
6|Sequence|26|35|AGEGIQCSQR
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 2 GEGIQCS 8
G+G QCS
Sbjct: 167 GKGTQCS 173
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 1 AGEGIQCS 8
AGE I+C+
Sbjct: 341 AGEPIECA 348
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 AGEGIQC 7
AG GI C
Sbjct: 595 AGAGIDC 601
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 AGEGIQC 7
AG GI C
Sbjct: 595 AGAGIDC 601
>sp|NSP5_ROTGI|NON-STRUCTURAL protein 5|Rotavirus B (isolate RVB/Rat/United
Query: 3 EGIQCS 8
EG++CS
Sbjct: 112 EGLECS 117
7|Sequence|31|40|QCSQRMLSFS
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 QCSQRMLSFS 10
Q SQR SFS
Sbjct: 1203 QSSQRSPSFS 1212
8|Sequence|36|45|MLSFSDALLS
***** No hits found ******
9|Sequence|41|50|DALLSIIATV
>sp|PG061_MONPV|PROTEIN OPG061|Monkeypox virus (MPXV)
Query: 1 DALLSII 7
DALLSII
Sbjct: 156 DALLSII 162
>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)
Query: 1 DALLSIIAT 9
DAL SII T
Sbjct: 304 DALESIITT 312
>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 DALLSIIAT 9
DAL SII T
Sbjct: 304 DALESIITT 312
>sp|PG061_VACCP|PROTEIN OPG061|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 DALLSII 7
DALLSII
Sbjct: 156 DALLSII 162
>sp|PG061_VACCC|PROTEIN OPG061|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DALLSII 7
DALLSI+
Sbjct: 156 DALLSIV 162
10|Sequence|46|55|IIATVMILPV
>sp|GI_VZVO|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Oka vaccine)
Query: 1 IIATVMIL 8
I+A+VMIL
Sbjct: 279 IVASVMIL 286
>sp|GI_VZVD|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 IIATVMIL 8
I+A+VMIL
Sbjct: 279 IVASVMIL 286
11|Sequence|51|60|MILPVTHTEI
>sp|VP7_ROTGA|OUTER capsid glycoprotein VP7|Rotavirus B (isolate
Query: 2 ILPVTHTEI 10
I+P TH E+
Sbjct: 19 IVPSTHPEV 27
>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 MILPVTHT 8
M+LP HT
Sbjct: 178 MVLPPCHT 185
>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 MILPVTHT 8
M+LP HT
Sbjct: 178 MVLPPCHT 185
>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)
Query: 3 LPVTHTEI 10
LP+ H EI
Sbjct: 294 LPILHDEI 301
>sp|US03_HCMVA|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PVTHT 8
PVTHT
Sbjct: 104 PVTHT 108
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 LPVTH 7
LPVTH
Sbjct: 124 LPVTH 128
>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 LPVTH 7
LPVTH
Sbjct: 124 LPVTH 128
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 MILPVT 6
MI+PVT
Sbjct: 1030 MIIPVT 1035
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 2 ILPVTHT 8
++PVT+T
Sbjct: 1319 VIPVTYT 1325
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 4 PVTHTE 9
P+T+TE
Sbjct: 471 PITYTE 476
>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PVTHTE 9
PV+HT+
Sbjct: 91 PVSHTQ 96
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 PVTHTE 9
P+T+TE
Sbjct: 471 PITYTE 476
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 PVTHTE 9
P+T+TE
Sbjct: 471 PITYTE 476
12|Sequence|56|65|THTEISPEQQ
>sp|TOP1_VACCC|DNA topoisomerase 1B|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 HTEISPEQ 9
H EISP++
Sbjct: 152 HIEISPDE 159
>sp|TOP1_VACCA|DNA topoisomerase 1B|Vaccinia virus (strain Ankara) (VACV)
Query: 2 HTEISPEQ 9
H EISP++
Sbjct: 152 HIEISPDE 159
>sp|TOP1_MONPV|DNA topoisomerase I|Monkeypox virus (MPXV)
Query: 2 HTEISPEQ 9
H EISP++
Sbjct: 152 HIEISPDE 159
>sp|TOP1_VAR67|DNA topoisomerase 1|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 HTEISPEQ 9
H EISP++
Sbjct: 152 HIEISPDK 159
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 THTEISPE 8
T+TEI P+
Sbjct: 1865 TYTEIEPK 1872
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 THTEISPE 8
T+TEI P+
Sbjct: 1865 TYTEIEPK 1872
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 5 ISPEQQ 10
ISPE+Q
Sbjct: 232 ISPEEQ 237
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 5 ISPEQQ 10
ISPE+Q
Sbjct: 229 ISPEEQ 234
>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)
Query: 3 TEISPEQQ 10
TE+ PEQ+
Sbjct: 38 TEVRPEQK 45
>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)
Query: 3 TEISPEQQ 10
TE+ PEQ+
Sbjct: 38 TEVRPEQK 45
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 2 HTEISPE 8
HT I PE
Sbjct: 126 HTPIHPE 132
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 1 THTEISPE 8
THT SPE
Sbjct: 784 THTIYSPE 791
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 THTEISPE 8
THT SPE
Sbjct: 784 THTIYSPE 791
>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)
Query: 1 THTEISPE 8
THT SPE
Sbjct: 500 THTIYSPE 507
13|Sequence|61|70|SPEQQFDRSV
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 PEQQFDRSV 10
PE++F RS+
Sbjct: 1516 PEEEFGRSI 1524
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 PEQQFDRSV 10
PE++F RS+
Sbjct: 1516 PEEEFGRSI 1524
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 1 SPEQQFD 7
SPE QFD
Sbjct: 460 SPEAQFD 466
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 SPEQQFDRSV 10
+PEQQ D +
Sbjct: 1946 APEQQMDNGI 1955
>sp|NSP4_ROTWI|NON-STRUCTURAL glycoprotein 4|Rotavirus A (isolate RVA/Human/United
Query: 3 EQQFDRSV 10
EQQ DR V
Sbjct: 96 EQQMDRIV 103
>sp|NSP4_ROTH4|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 3 EQQFDRSV 10
EQQ DR V
Sbjct: 96 EQQMDRIV 103
>sp|NSP4_ROTHM|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 3 EQQFDRSV 10
EQQ DR V
Sbjct: 96 EQQMDRIV 103
>sp|NSP4_ROTYO|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 3 EQQFDRSV 10
EQQ DR V
Sbjct: 96 EQQMDRIV 103
>sp|NSP4_ROTHK|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 3 EQQFDRSV 10
EQQ DR V
Sbjct: 96 EQQMDRIV 103
>sp|NSP4_ROTHW|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 3 EQQFDRSV 10
EQQ DR V
Sbjct: 96 EQQMDRIV 103
>sp|NSP4_ROTHP|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 3 EQQFDRSV 10
EQQ DR V
Sbjct: 96 EQQMDRIV 103
>sp|NSP4_ROTAD|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 3 EQQFDRSV 10
EQQ DR V
Sbjct: 96 EQQMDRIV 103
>sp|NSP4_ROTHT|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 3 EQQFDRSV 10
EQQ DR V
Sbjct: 96 EQQMDRIV 103
>sp|Y145_ADE07|UNCHARACTERIZED 14.5 kDa early protein|Human adenovirus B serotype 7
Query: 2 PEQQFDR 8
PE++F+R
Sbjct: 26 PEREFNR 32
>sp|NSP4_ROTHV|NON-STRUCTURAL glycoprotein 4|Rotavirus A (isolate
Query: 3 EQQFDRSV 10
EQQ DR V
Sbjct: 96 EQQMDRIV 103
>sp|NSP4_ROTAM|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 3 EQQFDRSV 10
EQQ DR +
Sbjct: 96 EQQMDRII 103
14|Sequence|66|75|FDRSVQRLLA
>sp|REV_HV2KR|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 FDRSVQRL 8
DR++QRL
Sbjct: 69 LDRAIQRL 76
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 FDRSVQRL 8
FD VQRL
Sbjct: 250 FDSPVQRL 257
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 FDRSVQRL 8
FD VQRL
Sbjct: 250 FDSPVQRL 257
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 FDRSVQRL 8
FD VQRL
Sbjct: 250 FDSPVQRL 257
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 1 FDRSVQRLL 9
FD VQRL
Sbjct: 269 FDSPVQRLF 277
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 1 FDRSVQRL 8
FD VQRL
Sbjct: 269 FDSPVQRL 276
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 2 DRSVQRLL 9
D+SV+R+L
Sbjct: 66 DKSVERIL 73
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 DRSVQRLL 9
D+SV+R+L
Sbjct: 66 DKSVERIL 73
15|Sequence|71|80|QRLLATRIAV
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 QRLLATR 7
QR++ATR
Sbjct: 918 QRMMATR 924
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 1 QRLLATR 7
QR++ATR
Sbjct: 918 QRMMATR 924
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LLATRIA 9
LLATR+A
Sbjct: 1040 LLATRLA 1046
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LLATRIA 9
LLATR+A
Sbjct: 1040 LLATRLA 1046
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 QRLLATRI 8
QRL+ TR+
Sbjct: 823 QRLVVTRV 830
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QRLLATRI 8
QRL+ TR+
Sbjct: 823 QRLVVTRV 830
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QRLLATRI 8
QRL+ TR+
Sbjct: 823 QRLVVTRV 830
16|Sequence|76|85|TRIAVYLMTF
>sp|VU8_HHV7J|PROTEIN U8|Human herpesvirus 7 (strain JI)
Query: 1 TRIAVYLMTF 10
TRIA L+TF
Sbjct: 309 TRIADCLLTF 318
>sp|US27_HCMVA|G-PROTEIN coupled receptor homolog US27|Human cytomegalovirus (strain
Query: 1 TRIAVYLM 8
TR+ V+LM
Sbjct: 33 TRLGVWLM 40
17|Sequence|81|90|YLMTFLIVTV
>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain
Query: 1 YLMTFLIVTV 10
Y +TFL VTV
Sbjct: 170 YCVTFLSVTV 179
>sp|MATRX_MUMPS|MATRIX protein|Mumps virus (strain SBL) (MuV)
Query: 1 YLMTFLIVTV 10
Y +TFL VTV
Sbjct: 170 YCVTFLSVTV 179
>sp|MATRX_MUMPM|MATRIX protein|Mumps virus genotype B (strain
Query: 1 YLMTFLIVTV 10
Y +TFL VTV
Sbjct: 170 YCVTFLSVTV 179
>sp|MATRX_MUMPJ|MATRIX protein|Mumps virus genotype A (strain
Query: 1 YLMTFLIVTV 10
Y +TFL VTV
Sbjct: 170 YCVTFLSVTV 179
>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)
Query: 1 YLMTFLIVTV 10
Y +TFL VTV
Sbjct: 170 YCVTFLSVTV 179
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 YLMTFLIVT 9
YLM LIV+
Sbjct: 678 YLMLLLIVS 686
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 YLMTFLIVT 9
YLM LIV+
Sbjct: 678 YLMLLLIVS 686
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 YLMTFLIVTV 10
YLM FL+ V
Sbjct: 1219 YLMGFLVKRV 1228
>sp|SPIKE_ADE03|FIBER protein|Human adenovirus B serotype 3
Query: 1 YLMTFL 6
Y+MTFL
Sbjct: 284 YVMTFL 289
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 LMTFLIVTV 10
L+TFL++ V
Sbjct: 2231 LLTFLLMVV 2239
>sp|UL64_HCMVA|UNCHARACTERIZED protein UL64|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 TFLIVT 9
TFL+VT
Sbjct: 34 TFLVVT 39
>sp|PG166_VARV|PROTEIN OPG166|Variola virus
Query: 1 YLMTFLIVT 9
YL TF+++T
Sbjct: 10 YLCTFVVIT 18
>sp|PG166_VAR67|PROTEIN OPG166|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 YLMTFLIVT 9
YL TF+++T
Sbjct: 10 YLCTFVVIT 18
18|Sequence|86|95|LIVTVAWAAH
>sp|AN_VZVD|ALKALINE nuclease|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 IVTVAWA 8
I T+AWA
Sbjct: 396 ITTIAWA 402
>sp|AN_VZVO|ALKALINE nuclease|Varicella-zoster virus (strain Oka vaccine)
Query: 2 IVTVAWA 8
I T+AWA
Sbjct: 396 ITTIAWA 402
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 5 VAWAAH 10
VAW AH
Sbjct: 345 VAWLAH 350
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 5 VAWAAH 10
VAW AH
Sbjct: 347 VAWLAH 352
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 5 VAWAAH 10
VAW AH
Sbjct: 346 VAWLAH 351
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 5 VAWAAH 10
VAW AH
Sbjct: 345 VAWLAH 350
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 5 VAWAAH 10
VAW AH
Sbjct: 345 VAWLAH 350
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 5 VAWAAH 10
VAW AH
Sbjct: 344 VAWLAH 349
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 5 VAWAAH 10
VAW AH
Sbjct: 345 VAWLAH 350
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 5 VAWAAH 10
VAW AH
Sbjct: 345 VAWLAH 350
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 3 VTVAWAAH 10
+T+ WA H
Sbjct: 445 MTIKWAPH 452
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 5 VAWAAH 10
VAW AH
Sbjct: 347 VAWLAH 352
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 5 VAWAAH 10
VAW AH
Sbjct: 346 VAWLAH 351
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 5 VAWAAH 10
VAW AH
Sbjct: 346 VAWLAH 351
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 5 VAWAAH 10
VAW AH
Sbjct: 344 VAWLAH 349
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 2 IVTVAWAA 9
I+T AW A
Sbjct: 1621 IITQAWTA 1628
>sp|TRX2_HHV2H|TRIPLEX capsid protein 2|Human herpesvirus 2 (strain HG52)
Query: 5 VAWAAH 10
VAW AH
Sbjct: 276 VAWLAH 281
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 2 IVTVAWAAH 10
I AWA H
Sbjct: 785 ITAPAWARH 793
19|Sequence|91|100|AWAAHTRLFQ
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)
Query: 2 WAAHTRLF 9
W+AH +L+
Sbjct: 488 WSAHNKLY 495
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 2 WAAHTRLF 9
W+AH +L+
Sbjct: 488 WSAHNKLY 495
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 2 WAAHTRLF 9
W+AH +L+
Sbjct: 488 WSAHNKLY 495
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 AWAAHT 6
AW+ HT
Sbjct: 176 AWSGHT 181
>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)
Query: 2 WAAHTRL 8
W+ H RL
Sbjct: 160 WSGHRRL 166
>sp|IL1BP_CWPXB|INTERLEUKIN-1-BINDING protein|Cowpox virus (strain Brighton Red)
Query: 2 WAAHTRL 8
W+ H RL
Sbjct: 160 WSGHRRL 166
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 1 AWAAHT 6
AW+ HT
Sbjct: 176 AWSGHT 181
>sp|NP_ADE05|PRE-HISTONE-LIKE nucleoprotein|Human adenovirus C serotype 5
Query: 2 WAAHTR 7
W AH R
Sbjct: 44 WGAHKR 49
>sp|NP_ADE02|PRE-HISTONE-LIKE nucleoprotein|Human adenovirus C serotype 2
Query: 2 WAAHTR 7
W AH R
Sbjct: 44 WGAHKR 49
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 AWAAHTRLF 9
AW AH F
Sbjct: 617 AWFAHVHDF 625
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 WAAHT 6
W AHT
Sbjct: 1860 WQAHT 1864
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 WAAHT 6
W AHT
Sbjct: 1860 WQAHT 1864
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 3 AAHTRLFQ 10
AAH RL+
Sbjct: 1120 AAHARLYP 1127
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 3 AAHTRLFQ 10
AAH RL+
Sbjct: 1092 AAHARLYP 1099
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 2 WAAHT 6
W AHT
Sbjct: 1209 WLAHT 1213
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 AWAAH 5
WAAH
Sbjct: 1787 GWAAH 1791
20|Sequence|96|105|TRLFQVVGKT
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 2 RLFQVVGKT 10
RL+ VVG T
Sbjct: 791 RLYAVVGDT 799
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 TRLFQVVGK 9
TR+F +GK
Sbjct: 1911 TRVFTTIGK 1919
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 TRLFQVVGKT 10
TR++QV+ T
Sbjct: 243 TRIYQVLPDT 252
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 TRLFQVVGKT 10
TR++QV+ T
Sbjct: 243 TRIYQVLPDT 252
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 TRLFQVVGKT 10
TR++QV+ T
Sbjct: 243 TRIYQVLPDT 252
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 TRLFQVVGKT 10
TR++QV+ T
Sbjct: 243 TRIYQVLPDT 252
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 TRLFQVVGKT 10
TR++QV+ T
Sbjct: 243 TRIYQVLPDT 252
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 TRLFQVVGKT 10
TR++QV+ T
Sbjct: 243 TRIYQVLPDT 252
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 TRLFQVVGKT 10
TR++QV+ T
Sbjct: 243 TRIYQVLPDT 252
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 TRLFQVVGKT 10
TR++QV+ T
Sbjct: 243 TRIYQVLPDT 252
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 TRLFQVVGKT 10
TR++QV+ T
Sbjct: 243 TRIYQVLPDT 252
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 RLFQVVG 8
R+F VVG
Sbjct: 1354 RIFNVVG 1360
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 RLFQVVG 8
R+F VVG
Sbjct: 1354 RIFNVVG 1360
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 TRLFQVVGK 9
TRL Q VG+
Sbjct: 487 TRLAQYVGQ 495
21|Sequence|101|110|VVGKTDDTLA
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 1 VVGKTDDTLA 10
V+G+ DTLA
Sbjct: 389 VLGQGQDTLA 398
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 1 VVGKTDDTLA 10
V+G+ DTLA
Sbjct: 389 VLGQGQDTLA 398
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 VVGKTDDTL 9
VVGK DT+
Sbjct: 311 VVGKVTDTI 319
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 2 VGKTDDTL 9
+G+ DD+L
Sbjct: 796 IGRQDDSL 803
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 2 VGKTDDTL 9
+G+ DD+L
Sbjct: 796 IGRQDDSL 803
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 VVGKTDDTL 9
VVG T+D L
Sbjct: 2110 VVGATNDGL 2118
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 VGKTDDTLA 10
VG+ DT+A
Sbjct: 579 VGRVADTIA 587
>sp|UL62_HCMVA|UNCHARACTERIZED protein UL62|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VVGKTDD 7
V G+TDD
Sbjct: 210 VEGRTDD 216
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 VGKTDDTL 9
VGK DTL
Sbjct: 119 VGKVIDTL 126
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 2 VGKTDDTL 9
VGK DTL
Sbjct: 119 VGKVIDTL 126
22|Sequence|106|115|DDTLALLNLA
>sp|ORF4B_MERS1|NON-STRUCTURAL protein ORF4b|Middle East respiratory syndrome-related coronavirus
Query: 3 TLALLNL 9
TLALLNL
Sbjct: 96 TLALLNL 102
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 DDTLALLN 8
DDTL +LN
Sbjct: 745 DDTLQVLN 752
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 DDTLALLN 8
DDTL +LN
Sbjct: 745 DDTLQVLN 752
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 DDTLALLN 8
DDTL +LN
Sbjct: 744 DDTLQVLN 751
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 DDTLALLN 8
DDTL +LN
Sbjct: 745 DDTLQVLN 752
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 1 DDTLALLN 8
DDTL +LN
Sbjct: 743 DDTLQVLN 750
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 DDTLALLNL 9
DD+LAL L
Sbjct: 2206 DDSLALTGL 2214
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 DDTLALLNL 9
DD L++LN+
Sbjct: 339 DDLLSILNI 347
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 DDTLALLNL 9
DD+LAL L
Sbjct: 2198 DDSLALTGL 2206
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 2 DTLALLNLA 10
DT+ L+N+A
Sbjct: 496 DTVTLVNVA 504
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 2 DTLALLNLA 10
DT+ L+N+A
Sbjct: 496 DTVTLVNVA 504
>sp|GL_HCMV6|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5040) (HHV-5)
Query: 2 DTLALL 7
DTLALL
Sbjct: 107 DTLALL 112
>sp|GL_HCMVA|ENVELOPE glycoprotein L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DTLALL 7
DTLALL
Sbjct: 107 DTLALL 112
>sp|GL_HCMV3|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 2387) (HHV-5)
Query: 2 DTLALL 7
DTLALL
Sbjct: 107 DTLALL 112
23|Sequence|111|120|LLNLACMMTI
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 NLACMMTI 10
NL CM+TI
Sbjct: 247 NLNCMLTI 254
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 NLACMMTI 10
NL CM+TI
Sbjct: 247 NLNCMVTI 254
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 NLACMMTI 10
NL CM+TI
Sbjct: 247 NLNCMVTI 254
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 3 NLACMMTI 10
NLAC M I
Sbjct: 779 NLACCMKI 786
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 LLNLACMMTI 10
L L C+MTI
Sbjct: 2164 LCALVCLMTI 2173
>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 5 ACMMTI 10
ACMMT+
Sbjct: 293 ACMMTM 298
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 LLNLACMM 8
L+NL C M
Sbjct: 609 LINLPCTM 616
>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 ACMMTI 10
ACMMT+
Sbjct: 293 ACMMTM 298
>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 ACMMTI 10
ACMMT+
Sbjct: 293 ACMMTM 298
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 LNLACMM 8
+N+AC+M
Sbjct: 1759 VNVACLM 1765
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 LNLACMM 8
+N+AC+M
Sbjct: 1729 VNVACLM 1735
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 LNLACMM 8
+N+AC+M
Sbjct: 1709 VNVACLM 1715
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 LNLACMM 8
+N+AC+M
Sbjct: 1759 VNVACLM 1765
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 LNLACMM 8
+N+AC+M
Sbjct: 1729 VNVACLM 1735
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 LNLACMM 8
+N+AC+M
Sbjct: 1709 VNVACLM 1715
24|Sequence|116|125|CMMTITFLPY
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CMMTIT 6
CM+TIT
Sbjct: 250 CMLTIT 255
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 3 MTITFL 8
MTITFL
Sbjct: 1 MTITFL 6
>sp|VPAP_HCMVM|DNA polymerase processivity factor|Human cytomegalovirus (strain
Query: 4 TITFLP 9
T+TFLP
Sbjct: 39 TVTFLP 44
>sp|VPAP_HCMVA|DNA polymerase processivity factor|Human cytomegalovirus (strain
Query: 4 TITFLP 9
T+TFLP
Sbjct: 39 TVTFLP 44
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 CMMTIT 6
CM+TIT
Sbjct: 250 CMVTIT 255
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CMMTIT 6
CM+TIT
Sbjct: 250 CMVTIT 255
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 MTITFLPY 10
+TI LPY
Sbjct: 1165 LTINLLPY 1172
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 1 CMMTITFL 8
CM I+FL
Sbjct: 488 CMSLISFL 495
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 1 CMMTITFL 8
CM I+FL
Sbjct: 488 CMSLISFL 495
>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1
Query: 1 CMMTITFL 8
CM +TFL
Sbjct: 124 CMDILTFL 131
25|Sequence|121|130|TFLPYTFSLM
>sp|NSP1_ROT41|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 3 LPYTFSL 9
LP+TF+L
Sbjct: 429 LPFTFTL 435
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 TFLPYTFSLM 10
++PY F+L+
Sbjct: 2144 NYMPYVFTLL 2153
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 TFLPYTFSLM 10
++PY F+L+
Sbjct: 2144 NYMPYVFTLL 2153
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 TFLPYTFSL 9
TF+ TFSL
Sbjct: 1280 TFVKTTFSL 1288
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 TFLPYTFSL 9
TF+ TFSL
Sbjct: 1279 TFVKTTFSL 1287
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 3 LPYTFS 8
+PYTFS
Sbjct: 487 IPYTFS 492
>sp|YVBD_VACCC|UNCHARACTERIZED 7.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 FLPYTFSLM 10
LPYT +L+
Sbjct: 62 LLPYTINLL 70
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 TFLPYTF 7
FLPY++
Sbjct: 2415 NFLPYSY 2421
26|Sequence|126|135|TFSLMVTFPD
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 TFSLMVTFP 9
TF+ ++ FP
Sbjct: 15 TFTYVIKFP 23
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 2 FSLMVTF 8
FS+MV+F
Sbjct: 854 FSIMVSF 860
>sp|SPI2_VARV|SERINE proteinase inhibitor 2|Variola virus
Query: 3 SLMVTFPD 10
S+MV PD
Sbjct: 198 SMMVILPD 205
>sp|SPI2_VAR67|SERINE proteinase inhibitor 2|Variola virus (isolate
Query: 3 SLMVTFPD 10
S+MV PD
Sbjct: 198 SMMVILPD 205
>sp|SPI2B_VACCC|PUTATIVE serine proteinase inhibitor 2|Vaccinia virus (strain Copenhagen)
Query: 3 SLMVTFPD 10
S+MV PD
Sbjct: 75 SMMVILPD 82
27|Sequence|131|140|VTFPDVPLGI
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 2 TFPDVPL 8
TFP++P+
Sbjct: 476 TFPEIPV 482
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 4 PDVPLG 9
PDVPLG
Sbjct: 674 PDVPLG 679
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 4 PDVPLG 9
PDVPLG
Sbjct: 674 PDVPLG 679
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 4 PDVPLG 9
PDVPLG
Sbjct: 674 PDVPLG 679
>sp|VL2_HPV6B|MINOR capsid protein L2|Human papillomavirus type 6b
Query: 1 VTFPDVPLG 9
+TFP P+G
Sbjct: 404 ITFPTAPMG 412
>sp|VL2_HPV6A|MINOR capsid protein L2|Human papillomavirus type 6a
Query: 1 VTFPDVPLG 9
+TFP P+G
Sbjct: 404 ITFPTAPMG 412
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 3 FPDVPL 8
FPD+P+
Sbjct: 307 FPDIPV 312
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 3 FPDVPL 8
FPD+P+
Sbjct: 307 FPDIPV 312
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 3 FPDVPL 8
FPD+P+
Sbjct: 307 FPDIPV 312
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 3 FPDVPL 8
FPD+P+
Sbjct: 307 FPDIPV 312
>sp|SCP_EBVB9|SMALL capsomere-interacting protein|Epstein-Barr virus (strain B95-8)
Query: 3 FPDVPL 8
FPD PL
Sbjct: 18 FPDSPL 23
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 FPDVPLGI 10
F VPLGI
Sbjct: 4366 FVQVPLGI 4373
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 FPDVPLGI 10
F VPLGI
Sbjct: 4386 FVQVPLGI 4393
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 FPDVPLGI 10
F VPLGI
Sbjct: 4416 FVQVPLGI 4423
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 FPDVPLG 9
P+VP+G
Sbjct: 737 LPEVPIG 743
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 FPDVPLGI 10
F VPLGI
Sbjct: 4366 FVQVPLGI 4373
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 FPDVPLGI 10
F VPLGI
Sbjct: 4416 FVQVPLGI 4423
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 FPDVPLGI 10
F VPLGI
Sbjct: 4386 FVQVPLGI 4393
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 4 PDVPLGI 10
PD+P+G+
Sbjct: 493 PDLPIGL 499
>sp|REV_HV2KR|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 2 TFPDVP 7
TFPD P
Sbjct: 59 TFPDPP 64
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 4 PDVPLGI 10
PD P GI
Sbjct: 776 PDTPYGI 782
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 VTFPD 5
VTFPD
Sbjct: 81 VTFPD 85
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 1 VTFPD 5
VTFPD
Sbjct: 76 VTFPD 80
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 1 VTFPD 5
VTFPD
Sbjct: 76 VTFPD 80
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 1 VTFPD 5
VTFPD
Sbjct: 76 VTFPD 80
>sp|VL2_HPV07|MINOR capsid protein L2|Human papillomavirus 7
Query: 1 VTFPDVPLG 9
+ FP VP G
Sbjct: 408 IVFPSVPAG 416
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 1 VTFPD 5
VTFPD
Sbjct: 76 VTFPD 80
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VTFPDVPLG 9
VT P PLG
Sbjct: 8 VTVPTGPLG 16
>sp|VL2_HPV43|MINOR capsid protein L2|Human papillomavirus 43
Query: 1 VTFPDVPLGI 10
++FP +P+ I
Sbjct: 406 ISFPTIPIHI 415
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 VTFPDVPLG 9
VT P PLG
Sbjct: 8 VTVPTGPLG 16
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 3 FPDVPLGI 10
FP V LGI
Sbjct: 1837 FPYVSLGI 1844
28|Sequence|136|145|VPLGIFLFCV
>sp|DNBI_ADE12|PROBABLE DNA-binding protein|Human adenovirus A serotype 12
Query: 1 VPLGIFLFC 9
+P +FLFC
Sbjct: 118 LPFVLFLFC 126
>sp|TRX1_HHV8P|TRIPLEX capsid protein 1|Human herpesvirus 8 type P
Query: 2 PLGIFLF 8
PLG FLF
Sbjct: 85 PLGTFLF 91
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 3 LGIFLFCV 10
L IFL CV
Sbjct: 2248 LAIFLVCV 2255
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 LGIFLFC 9
+GIFL C
Sbjct: 2135 VGIFLIC 2141
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 LGIFLFC 9
+GIFL C
Sbjct: 2135 VGIFLIC 2141
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 LGIFLFC 9
+GIFL C
Sbjct: 2135 VGIFLIC 2141
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 LGIFLFC 9
+GIFL C
Sbjct: 2135 VGIFLIC 2141
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 LGIFLFC 9
+GIFL C
Sbjct: 2135 VGIFLIC 2141
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 LGIFLFCV 10
L +FL CV
Sbjct: 2257 LAVFLICV 2264
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 LGIFLFCV 10
L +FL CV
Sbjct: 2253 LAVFLICV 2260
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 LGIFLFCV 10
L +FL CV
Sbjct: 2255 LAVFLICV 2262
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 LGIFLFCV 10
L +FL CV
Sbjct: 2257 LAVFLICV 2264
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 LGIFLFCV 10
L +FL CV
Sbjct: 2256 LAVFLICV 2263
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 LGIFLFCV 10
L +FL CV
Sbjct: 2256 LAVFLICV 2263
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 LGIFLFCV 10
L +FL CV
Sbjct: 2256 LAVFLICV 2263
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 LGIFLFCV 10
L +FL CV
Sbjct: 2256 LAVFLICV 2263
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 LGIFLFCV 10
LG++ FCV
Sbjct: 3495 LGVYDFCV 3502
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 LGIFLFCV 10
LG++ FCV
Sbjct: 3495 LGVYDFCV 3502
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 VPLGIFLF 8
+P+G++LF
Sbjct: 513 LPIGLWLF 520
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 LGIFLFCV 10
+G+FLF V
Sbjct: 2182 MGVFLFFV 2189
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 LGIFLFCV 10
L +FL C+
Sbjct: 2250 LAVFLICI 2257
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 VPLGIFLF 8
V +GIFLF
Sbjct: 1595 VFMGIFLF 1602
>sp|DR6_HHV6U|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PLGIFLFC 9
PLG +L C
Sbjct: 271 PLGPWLVC 278
>sp|DR7_HHV6U|TRANSACTIVATOR protein DR7|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PLGIFLFC 9
PLG +L C
Sbjct: 239 PLGPWLVC 246
Query: 1 VPLGIFLFC 9
+PL + +FC
Sbjct: 9 MPLRVQMFC 17
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 3 LGIFLFC 9
L +FL C
Sbjct: 2255 LAVFLIC 2261
29|Sequence|141|150|FLFCVCVIAI
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 1 FLFCVCVIAI 10
F+F +CVI +
Sbjct: 373 FIFQLCVITL 382
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 1 FLFCVCVIAI 10
F+F +CVI +
Sbjct: 373 FIFQLCVITL 382
>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P
Query: 2 LFCVC 6
+FCVC
Sbjct: 340 IFCVC 344
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 1 FLFCVCVIAI 10
+LF +CV+ I
Sbjct: 71 WLFLICVLLI 80
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 1 FLFCVCVIAI 10
F+F +C+I +
Sbjct: 401 FIFQLCIITL 410
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 2 LFCVCVIAI 10
L C+C++ +
Sbjct: 49 LMCLCILGL 57
>sp|K81_HHV8P|PROTEIN K8.1|Human herpesvirus 8 type P
Query: 1 FLFCVCVIA 9
+ C+C++A
Sbjct: 15 LILCLCLVA 23
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 FLFCV 5
FLFC+
Sbjct: 1644 FLFCI 1648
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 FLFCV 5
FLFC+
Sbjct: 1644 FLFCI 1648
>sp|PG001_MONPV|CHEMOKINE-BINDING protein|Monkeypox virus (MPXV)
Query: 2 LFCVCVIA 9
L C+C++A
Sbjct: 7 LACMCLVA 14
>sp|DUT_HHV6U|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 2 LFCVCVIAI 10
+FC CV I
Sbjct: 194 VFCECVTEI 202
>sp|DUT_HHV6G|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 2 LFCVCVIAI 10
+FC CV I
Sbjct: 194 VFCECVTEI 202
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 FCVC 6
FC+C
Sbjct: 566 FCIC 569
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 1 FLFCVCVIAI 10
F+F +C I +
Sbjct: 375 FIFQLCTITL 384
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 1 FLFCVCVIAI 10
F+F +C I +
Sbjct: 373 FIFQLCTITL 382
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 1 FLFCVCVIAI 10
F+F +C I +
Sbjct: 375 FIFQLCTITL 384
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 1 FLFCVCVIAI 10
F+F +C I +
Sbjct: 367 FIFQLCTITL 376
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 1 FLFCVCVIAI 10
F+F +C I +
Sbjct: 404 FIFQLCTITL 413
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 1 FLFCVCVIAI 10
F+F +C I +
Sbjct: 436 FIFQLCTITL 445
>sp|K1_HHV8P|PROTEIN K1|Human herpesvirus 8 type P
Query: 1 FLFCVCVIAI 10
FL+ VC +A+
Sbjct: 2 FLYVVCSLAV 11
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 3 FCVC 6
FCVC
Sbjct: 564 FCVC 567
>sp|VE5_HPV18|PROBABLE protein E5|Human papillomavirus type 18
Query: 1 FLFCVCV 7
FLFC CV
Sbjct: 6 FLFCFCV 12
30|Sequence|146|155|CVIAIGVVQA
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 1 CVIAIGV 7
C+I +GV
Sbjct: 233 CIIGMGV 239
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1090 ALGIIQA 1096
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1089 ALGIIQA 1095
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1084 ALGIIQA 1090
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1090 ALGIIQA 1096
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1082 ALGIIQA 1088
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1087 ALGIIQA 1093
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1086 ALGIIQA 1092
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1086 ALGIIQA 1092
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1090 ALGIIQA 1096
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1088 ALGIIQA 1094
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1086 ALGIIQA 1092
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1089 ALGIIQA 1095
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1084 ALGIIQA 1090
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1095 ALGIIQA 1101
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1094 ALGIIQA 1100
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1088 ALGIIQA 1094
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1089 ALGIIQA 1095
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1093 ALGIIQA 1099
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1089 ALGIIQA 1095
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1089 ALGIIQA 1095
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1101 ALGIIQA 1107
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1089 ALGIIQA 1095
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1101 ALGIIQA 1107
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1101 ALGIIQA 1107
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1091 ALGIIQA 1097
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1089 ALGIIQA 1095
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1084 ALGIIQA 1090
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1084 ALGIIQA 1090
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1084 ALGIIQA 1090
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1085 ALGIIQA 1091
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AIGVVQA 10
A+G++QA
Sbjct: 1089 ALGIIQA 1095
31|Sequence|151|160|GVVQALIVGY
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 1 GVVQALIVG 9
G+++AL+VG
Sbjct: 536 GIIRALLVG 544
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 1 GVVQALIVG 9
G+++AL+VG
Sbjct: 530 GIIRALLVG 538
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 GVVQALIVG 9
G+++AL+VG
Sbjct: 530 GIIRALLVG 538
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 1 GVVQALIVG 9
G+++AL+VG
Sbjct: 530 GIIRALLVG 538
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 1 GVVQALIVG 9
G+++AL+VG
Sbjct: 530 GIIRALLVG 538
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 1 GVVQALIVG 9
G+++AL+VG
Sbjct: 530 GIIRALLVG 538
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 1 GVVQALIVG 9
G+++AL+VG
Sbjct: 536 GIIRALLVG 544
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 1 GVVQALIVG 9
G+++AL+VG
Sbjct: 529 GIIRALLVG 537
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 1 GVVQALIVG 9
G+++AL+VG
Sbjct: 529 GIIRALLVG 537
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 1 GVVQALIVG 9
G+++AL+VG
Sbjct: 529 GIIRALLVG 537
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 GVVQALIVG 9
G+++AL+VG
Sbjct: 543 GIIRALLVG 551
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 1 GVVQALIVG 9
G+++AL+VG
Sbjct: 529 GIIRALLVG 537
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 1 GVVQALIVG 9
G+++AL+VG
Sbjct: 530 GIIRALLVG 538
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 1 GVVQALIVG 9
G+++AL+VG
Sbjct: 530 GIIRALLVG 538
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 1 GVVQALIVG 9
G+++AL+VG
Sbjct: 542 GIIRALLVG 550
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 1 GVVQALIVG 9
G+++AL+VG
Sbjct: 543 GIIRALLVG 551
>sp|E321_ADE03|EARLY E3 20.5 kDa glycoprotein|Human adenovirus B serotype 3
Query: 1 GVVQALIVG 9
G++ A++VG
Sbjct: 151 GIITAVVVG 159
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VVQALIVGY 10
V+Q+L VG+
Sbjct: 1593 VIQSLDVGF 1601
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VVQALIVGY 10
V+Q+L VG+
Sbjct: 1593 VIQSLDVGF 1601
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VVQALIVGY 10
V+Q+L VG+
Sbjct: 1593 VIQSLDVGF 1601
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VVQALIVGY 10
V+Q+L VG+
Sbjct: 1593 VIQSLDVGF 1601
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VVQALIVGY 10
V+Q+L VG+
Sbjct: 1593 VIQSLDVGF 1601
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VVQALIVGY 10
V+Q+L VG+
Sbjct: 1427 VIQSLDVGF 1435
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VVQALIVGY 10
V+Q+L VG+
Sbjct: 1593 VIQSLDVGF 1601
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VVQALIVGY 10
V+Q+L VG+
Sbjct: 1593 VIQSLDVGF 1601
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VVQALIVGY 10
V+Q+L VG+
Sbjct: 1591 VIQSLDVGF 1599
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 VVQALIVGY 10
V+Q+L VG+
Sbjct: 1593 VIQSLDVGF 1601
>sp|E321_ADE07|EARLY E3 20.5 kDa glycoprotein|Human adenovirus B serotype 7
Query: 1 GVVQALIVG 9
G++ A++VG
Sbjct: 151 GIITAVVVG 159
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 3 VQALIVG 9
+QA++VG
Sbjct: 2079 IQAIVVG 2085
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 3 VQALIVG 9
+QA++VG
Sbjct: 2075 IQAIVVG 2081
32|Sequence|156|165|LIVGYAFHFP
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 IVGYAFHFP 10
++GY FP
Sbjct: 2312 VIGYILFFP 2320
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 IVGYAFHFP 10
++GY FP
Sbjct: 2312 VIGYILFFP 2320
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 IVGYAFHFP 10
++GY FP
Sbjct: 2312 VIGYILFFP 2320
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 IVGYAFHFP 10
++GY FP
Sbjct: 2312 VIGYILFFP 2320
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 IVGYAFHFP 10
++GY FP
Sbjct: 2312 VIGYILFFP 2320
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 1 LIVGYAFHF 9
L Y+FHF
Sbjct: 501 LATHYSFHF 509
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 3 VGYAFHFP 10
+ Y F FP
Sbjct: 480 INYTFDFP 487
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 3 VGYAFHFP 10
+ Y F FP
Sbjct: 480 INYTFDFP 487
>sp|VE6_HPV32|PROTEIN E6|Human papillomavirus type 32
Query: 4 GYAFHF 9
YA+HF
Sbjct: 43 AYAYHF 48
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 5 YAFHF 9
+AFHF
Sbjct: 605 FAFHF 609
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 5 YAFHF 9
+AFHF
Sbjct: 605 FAFHF 609
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 5 YAFHF 9
+AFHF
Sbjct: 605 FAFHF 609
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 GYAFHF 9
G+A HF
Sbjct: 431 GFALHF 436
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 GYAFHF 9
G+A HF
Sbjct: 431 GFALHF 436
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 GYAFHF 9
G+A HF
Sbjct: 430 GFALHF 435
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 5 YAFHFP 10
Y FH P
Sbjct: 88 YVFHMP 93
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 YAFHFP 10
Y FH P
Sbjct: 88 YVFHMP 93
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 YAFHFP 10
Y FH P
Sbjct: 89 YVFHMP 94
>sp|VP7_ROTGI|OUTER capsid glycoprotein VP7|Rotavirus B (isolate RVB/Rat/United
Query: 3 VGYAFH 8
+GY FH
Sbjct: 172 LGYVFH 177
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 GYAFH 8
GY FH
Sbjct: 542 GYCFH 546
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 GYAFH 8
GY FH
Sbjct: 542 GYCFH 546
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 GYAFH 8
GY FH
Sbjct: 542 GYCFH 546
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 GYAFH 8
GY FH
Sbjct: 542 GYCFH 546
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 GYAFH 8
GY FH
Sbjct: 542 GYCFH 546
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 GYAFH 8
GY FH
Sbjct: 542 GYCFH 546
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 GYAFH 8
GY FH
Sbjct: 542 GYCFH 546
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 4 GYAFH 8
GY FH
Sbjct: 542 GYCFH 546
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 4 GYAFHF 9
GY+ HF
Sbjct: 590 GYSLHF 595
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 4 GYAFHF 9
GY+ HF
Sbjct: 590 GYSLHF 595
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 4 GYAFHF 9
GY+ HF
Sbjct: 590 GYSLHF 595
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 4 GYAFHF 9
GY+ HF
Sbjct: 590 GYSLHF 595
33|Sequence|161|170|AFHFPHLLSP
>sp|CVC1_HHV6Z|CAPSID vertex component 1|Human herpesvirus 6B (strain Z29)
Query: 2 FHFPHLLS 9
F F HLLS
Sbjct: 305 FSFEHLLS 312
>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)
Query: 4 FPHLLSP 10
F HLL+P
Sbjct: 213 FKHLLNP 219
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 HFPHLLS 9
HF HLL+
Sbjct: 2023 HFRHLLT 2029
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 HFPHLLS 9
HF HLL+
Sbjct: 2023 HFRHLLT 2029
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 HFPHLLS 9
HF HLL+
Sbjct: 2023 HFRHLLT 2029
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 HFPHLLS 9
HF HLL+
Sbjct: 2024 HFRHLLT 2030
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 HFPHLLS 9
HF HLL+
Sbjct: 2023 HFRHLLT 2029
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 HFPHLLS 9
HF HLL+
Sbjct: 2023 HFRHLLT 2029
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 HFPHLLS 9
HF HLL+
Sbjct: 2023 HFRHLLT 2029
>sp|YVAK_VACCC|UNCHARACTERIZED 7.5 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 HFPHLLSP 10
HF LL+P
Sbjct: 31 HFTRLLNP 38
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 AFHFPHLLSP 10
A +PH+L P
Sbjct: 869 AEEYPHVLGP 878
Query: 2 FHFPHLLSP 10
FH HL P
Sbjct: 95 FHNTHLFQP 103
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 HFPHLLS 9
HF HLL+
Sbjct: 2023 HFRHLLA 2029
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 3 HFPHLL 8
HFPH L
Sbjct: 31 HFPHDL 36
>sp|GM_HHV7J|ENVELOPE glycoprotein M|Human herpesvirus 7 (strain JI)
Query: 1 AFHFPHLLSP 10
A HFP+L P
Sbjct: 34 AVHFPNLGFP 43
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 HFPHLLS 9
HF HL++
Sbjct: 2025 HFRHLMT 2031
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 4 FPHLLSP 10
+PH L+P
Sbjct: 107 WPHYLTP 113
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 4 FPHLLSP 10
+PH L+P
Sbjct: 107 WPHYLTP 113
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 HFPHLLS 9
HF HL++
Sbjct: 2025 HFRHLMT 2031
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 4 FPHLLSP 10
+PH L+P
Sbjct: 107 WPHYLTP 113
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 FHFPHLL 8
FH+P+ L
Sbjct: 613 FHYPYRL 619
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 AFHFPHLL 8
A+H HLL
Sbjct: 472 AWHLGHLL 479
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 3 HFPHLLSP 10
HF H L P
Sbjct: 1020 HFTHALLP 1027
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 3 HFPHLLSP 10
HF H L P
Sbjct: 1020 HFTHALLP 1027
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 3 HFPHLLSP 10
HF H L P
Sbjct: 1020 HFTHALLP 1027
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 1 AFHFPH 6
F FPH
Sbjct: 540 GFEFPH 545
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 AFHFPHLL 8
A+H HLL
Sbjct: 472 AWHMGHLL 479
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 1 AFHFPHL 7
AF+F HL
Sbjct: 610 AFNFKHL 616
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 FHFPHLL 8
F+FPH +
Sbjct: 399 FNFPHTI 405
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 FPHLL 8
FPHL+
Sbjct: 130 FPHLM 134
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 FHFPHLLSP 10
FH H++ P
Sbjct: 93 FHNAHMVPP 101
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 FHFPHLLSP 10
FH H++ P
Sbjct: 93 FHNAHMVPP 101
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 FHFPHLLSP 10
FH H++ P
Sbjct: 93 FHNAHMVPP 101
34|Sequence|166|175|HLLSPQIQRS
>sp|ORF9B_SARS|ORF9B protein|Severe acute respiratory syndrome coronavirus
Query: 1 HLLSPQIQ 8
HL+ PQIQ
Sbjct: 14 HLVDPQIQ 21
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)
Query: 2 LLSPQIQRS 10
LLSPQ+ +S
Sbjct: 211 LLSPQVIKS 219
>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 2 LLSPQIQRS 10
LLSPQ+ +S
Sbjct: 211 LLSPQVIKS 219
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 2 LLSPQIQRS 10
LLSPQ+ +S
Sbjct: 211 LLSPQVIKS 219
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 2 LLSPQIQRS 10
LLSPQ+ +S
Sbjct: 211 LLSPQVIKS 219
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 HLLSPQIQRS 10
H LS Q+Q+S
Sbjct: 1196 HTLSRQLQKS 1205
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 HLLSPQIQRS 10
H LS Q+Q+S
Sbjct: 1204 HTLSRQLQKS 1213
>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV
Query: 1 HLLSPQIQ 8
HLL+P+I+
Sbjct: 181 HLLNPEIE 188
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 HLLSPQIQRS 10
H LS Q+Q++
Sbjct: 1195 HTLSKQLQKT 1204
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 3 LSPQIQ 8
LSPQ+Q
Sbjct: 90 LSPQLQ 95
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 3 LSPQIQ 8
LSPQ+Q
Sbjct: 92 LSPQLQ 97
>sp|GI_CHV1|ENVELOPE glycoprotein I|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 1 HLLSPQI 7
H L PQ+
Sbjct: 57 HFLGPQV 63
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 3 LSPQIQR 9
LSP IQR
Sbjct: 1825 LSPLIQR 1831
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 LSPQIQR 9
LSP IQR
Sbjct: 1825 LSPLIQR 1831
35|Sequence|171|180|QIQRSAHRAL
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 IQRSAHRAL 10
IQRS RAL
Sbjct: 186 IQRSVLRAL 194
>sp|MATRX_NIPAV|MATRIX protein|Nipah virus
Query: 1 QIQRSAHRAL 10
QIQ H+AL
Sbjct: 162 QIQLDKHQAL 171
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 QIQRSAHRA 9
QIQ++ HR+
Sbjct: 509 QIQQNLHRS 517
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 QIQRSAHR 8
+++RS HR
Sbjct: 3134 KLERSTHR 3141
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 QIQRSAHR 8
+++RS HR
Sbjct: 3156 KLERSTHR 3163
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 QIQRSAHR 8
+++RS HR
Sbjct: 3129 KLERSTHR 3136
36|Sequence|176|185|AHRALYRRHV
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 AHRALYRRHV 10
AH+ +Y HV
Sbjct: 1130 AHKVIYLHHV 1139
>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41
Query: 4 ALYRRHV 10
ALY RH+
Sbjct: 281 ALYARHI 287
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 HRALYRRH 9
+RAL+RR
Sbjct: 1090 NRALFRRQ 1097
>sp|B17_VACCC|PROTEIN B17|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 HRALYR 7
HR++YR
Sbjct: 229 HRSMYR 234
>sp|Z_JUNIN|RING finger protein Z|Junin mammarenavirus (JUNV) (Junn
Query: 1 AHRALYRRH 9
AH +LY R+
Sbjct: 29 AHSSLYGRY 37
>sp|B17_VARV|PROTEIN B17|Variola virus
Query: 2 HRALYR 7
HR++YR
Sbjct: 229 HRSMYR 234
>sp|B17_VAR67|PROTEIN B17|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 HRALYR 7
HR++YR
Sbjct: 229 HRSMYR 234
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 AHRALYR 7
AH LYR
Sbjct: 591 AHSVLYR 597
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 1 AHRALYR 7
AH LYR
Sbjct: 591 AHSVLYR 597
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 AHRALYRRH 9
+H+ L R H
Sbjct: 237 SHKVLMREH 245
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 5 LYRRHV 10
LY RHV
Sbjct: 786 LYMRHV 791
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 5 LYRRHV 10
LY RHV
Sbjct: 786 LYMRHV 791
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 5 LYRRHV 10
LY RHV
Sbjct: 786 LYARHV 791
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 5 LYRRHV 10
LY RHV
Sbjct: 786 LYARHV 791
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 5 LYRRHV 10
LY RH+
Sbjct: 80 LYNRHI 85
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 5 LYRRHV 10
LY RH+
Sbjct: 86 LYNRHI 91
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton
Query: 5 LYRRHV 10
LY RH+
Sbjct: 86 LYNRHI 91
>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AHRALYR 7
HRAL+R
Sbjct: 449 PHRALFR 455
>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 AHRALYR 7
HRAL+R
Sbjct: 449 PHRALFR 455
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 2 HRALYRRH 9
H A YR H
Sbjct: 924 HAAAYRAH 931
37|Sequence|181|190|YRRHVLGIVL
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 RRHVLGIVL 10
+RHVLG ++
Sbjct: 344 KRHVLGCLI 352
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RRHVLG 7
+RHVLG
Sbjct: 524 KRHVLG 529
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RRHVLG 7
+RHVLG
Sbjct: 344 KRHVLG 349
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RRHVLG 7
+RHVLG
Sbjct: 624 KRHVLG 629
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RRHVLG 7
+RHVLG
Sbjct: 624 KRHVLG 629
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RRHVLG 7
+RHVLG
Sbjct: 624 KRHVLG 629
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RRHVLG 7
+RHVLG
Sbjct: 624 KRHVLG 629
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RRHVLG 7
+RHVLG
Sbjct: 393 KRHVLG 398
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RRHVLG 7
+RHVLG
Sbjct: 624 KRHVLG 629
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 RRHVLG 7
+RHVLG
Sbjct: 624 KRHVLG 629
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RRHVLG 7
+RHVLG
Sbjct: 624 KRHVLG 629
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RRHVLG 7
+RHVLG
Sbjct: 624 KRHVLG 629
>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 YRRHVLGIVL 10
YRR LG+ L
Sbjct: 301 YRRRELGLPL 310
>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 YRRHVLGIVL 10
YRR LG+ L
Sbjct: 301 YRRRELGLPL 310
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 RHVLG 7
RHVLG
Sbjct: 345 RHVLG 349
>sp|SCP_HCMVM|SMALL capsomere-interacting protein|Human cytomegalovirus (strain
Query: 3 RHVLGIVL 10
RHV+ +VL
Sbjct: 19 RHVVNVVL 26
>sp|SCP_HCMVA|SMALL capsomere-interacting protein|Human cytomegalovirus (strain
Query: 3 RHVLGIVL 10
RHV+ +VL
Sbjct: 19 RHVVNVVL 26
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 YRRHVLGI 8
YR +LG+
Sbjct: 784 YRNEILGL 791
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 YRRHVLGI 8
YR +LG+
Sbjct: 799 YRNEILGL 806
38|Sequence|186|195|LGIVLQGPAL
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 5 LQGPAL 10
LQGPAL
Sbjct: 695 LQGPAL 700
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 3 IVLQGP 8
IV+QGP
Sbjct: 475 IVIQGP 480
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 LGIVLQGP 8
LG++ QGP
Sbjct: 1595 LGLLKQGP 1602
>sp|GI_CHV1|ENVELOPE glycoprotein I|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 2 GIVLQGPAL 10
G+V++GP +
Sbjct: 19 GVVIRGPTI 27
39|Sequence|191|200|QGPALCFAAA
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 QGPALCFAAA 10
QGP FAAA
Sbjct: 965 QGPGAYFAAA 974
>sp|UL116_HCMVA|UNCHARACTERIZED protein UL116|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PALCF 7
PALCF
Sbjct: 14 PALCF 18
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 2 GPALC 6
GPALC
Sbjct: 72 GPALC 76
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 2 GPALC 6
GPALC
Sbjct: 72 GPALC 76
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 QGPALCFAAA 10
Q P CFA +
Sbjct: 1481 QSPFACFAES 1490
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 3 PALCF 7
P+LCF
Sbjct: 81 PSLCF 85
>sp|BET_FOAMV|PROTEIN Bet|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 PALCF 7
P+LCF
Sbjct: 239 PSLCF 243
>sp|VP35_EBOZ5|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 PALCFAA 9
P LC+A+
Sbjct: 51 PGLCYAS 57
>sp|VP35_EBOZM|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 PALCFAA 9
P LC+A+
Sbjct: 51 PGLCYAS 57
>sp|VCYCL_HHV8P|VIRAL cyclin homolog|Human herpesvirus 8 type P
Query: 4 ALCFAAA 10
+LC+AAA
Sbjct: 117 SLCYAAA 123
>sp|VP16_HHV1F|TEGUMENT protein VP16|Human herpesvirus 1 (strain F)
Query: 2 GPALC 6
GPALC
Sbjct: 74 GPALC 78
>sp|VP16_HHV11|TEGUMENT protein VP16|Human herpesvirus 1 (strain 17)
Query: 2 GPALC 6
GPALC
Sbjct: 74 GPALC 78
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 QGPALCF 7
+ P+LCF
Sbjct: 131 ETPSLCF 137
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 QGPALCF 7
+ P+LCF
Sbjct: 131 ETPSLCF 137
40|Sequence|196|205|CFAAAIFSLF
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 1 CFAAAIFSL 9
CFA A F+L
Sbjct: 343 CFADAQFNL 351
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 1 CFAAAIF---SLF 10
CF +AIF SLF
Sbjct: 420 CFWSAIFFTTSLF 432
41|Sequence|201|210|IFSLFFVPLS
>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P
Query: 4 LFFVPLS 10
LFF PLS
Sbjct: 449 LFFYPLS 455
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 2 FSLFFVPLS 10
S FFVPL+
Sbjct: 99 LSKFFVPLT 107
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 2 FSLFFVPLS 10
S FFVPL+
Sbjct: 99 LSKFFVPLT 107
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 1 IFSLFFVPLS 10
+FSL ++P +
Sbjct: 159 VFSLSYIPFA 168
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 1 IFSLFFVPLS 10
+FSL ++P +
Sbjct: 159 VFSLSYIPFA 168
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IFSLFFVPLS 10
+FSL ++P +
Sbjct: 159 VFSLSYIPFA 168
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 IFSLFFV 7
++SLF+V
Sbjct: 165 VYSLFYV 171
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 IFSLFFV 7
++SLF+V
Sbjct: 162 VYSLFYV 168
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 IFSLFFVP 8
IFS F++P
Sbjct: 2218 IFSDFYLP 2225
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 IFSLFFVP 8
IFS F++P
Sbjct: 2218 IFSDFYLP 2225
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 IFSLFFVP 8
IFS F++P
Sbjct: 2306 IFSDFYLP 2313
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 IFSLFFVP 8
IFS F++P
Sbjct: 2276 IFSDFYLP 2283
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 IFSLFFVP 8
IFS F++P
Sbjct: 2256 IFSDFYLP 2263
42|Sequence|206|215|FVPLSYLLMV
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 FVPLSY 6
FVPL+Y
Sbjct: 297 FVPLNY 302
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 FVPLSYL 7
FVPL Y+
Sbjct: 298 FVPLDYV 304
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 FVPLSYLL 8
F P+ YLL
Sbjct: 242 FCPVDYLL 249
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 FVPLSYLL 8
F P+ YLL
Sbjct: 243 FCPVDYLL 250
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 FVPLSY 6
F PLSY
Sbjct: 295 FAPLSY 300
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 FVPLSYLL 8
F P+ YLL
Sbjct: 242 FCPVDYLL 249
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 FVPLSY 6
FVPL Y
Sbjct: 295 FVPLDY 300
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 FVPLSY 6
FVPL Y
Sbjct: 297 FVPLDY 302
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 FVPLSY 6
FVPL Y
Sbjct: 297 FVPLDY 302
>sp|REX_HTL3P|PROTEIN Rex|Human T-cell leukemia virus 3
Query: 1 FVPLSYLLM 9
FVPL Y M
Sbjct: 55 FVPLGYTAM 63
>sp|REX_HTL32|PROTEIN Rex|Human T-cell leukemia virus 3
Query: 1 FVPLSYLLM 9
FVPL Y M
Sbjct: 55 FVPLGYTAM 63
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 FVPLSYL 7
F+P SYL
Sbjct: 2416 FLPYSYL 2422
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 VPLSYL 7
+PLSY+
Sbjct: 1384 IPLSYI 1389
43|Sequence|211|220|YLLMVTVILL
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 YLLMVTVILL 10
++ VTVILL
Sbjct: 260 WMARVTVILL 269
44|Sequence|216|225|TVILLPYVSK
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 TVILLPYVSK 10
T + LPY+SK
Sbjct: 608 TEVKLPYISK 617
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 3 ILLPYVSK 10
IL PY SK
Sbjct: 717 ILFPYTSK 724
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 1 TVILLPYVSK 10
T + LPY+SK
Sbjct: 609 TEMELPYISK 618
>sp|UL88_HHV7J|PROTEIN U59|Human herpesvirus 7 (strain JI)
Query: 4 LLPYVSK 10
LLPY++K
Sbjct: 318 LLPYINK 324
>sp|Y112_ADE02|UNCHARACTERIZED protein F-112|Human adenovirus C serotype 2
Query: 4 LLPYVS 9
+LPY+S
Sbjct: 1 MLPYIS 6
>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain
Query: 6 PYVSK 10
PYVSK
Sbjct: 250 PYVSK 254
>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate
Query: 6 PYVSK 10
PYVSK
Sbjct: 250 PYVSK 254
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 ILLPYVS 9
I+LPYV+
Sbjct: 276 IVLPYVN 282
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 3 ILLPYVS 9
+LLPY++
Sbjct: 181 VLLPYIA 187
45|Sequence|221|230|PYVSKVTGWC
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 1 PYVSKV 6
PY+SKV
Sbjct: 614 PYISKV 619
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 2 YVSKVTG 8
YVS VTG
Sbjct: 56 YVSDVTG 62
>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 YVSKVTGWC 10
YV K+ +C
Sbjct: 422 YVKKIIAYC 430
>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)
Query: 2 YVSKVTGWC 10
YV K+ +C
Sbjct: 425 YVKKIIAYC 433
>sp|VC21_VACCC|PROTEIN C21/B27|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 YVSKVTGWC 10
YV K+ +C
Sbjct: 66 YVKKILAYC 74
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 2 YVSKVTG 8
Y+S VTG
Sbjct: 56 YISDVTG 62
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 2 YVSKVTG 8
Y+S VTG
Sbjct: 56 YISDVTG 62
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 2 YVSKVTG 8
Y+S VTG
Sbjct: 56 YISDVTG 62
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 1 PYVSKV 6
PY SKV
Sbjct: 1003 PYTSKV 1008
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 1 PYVSKV 6
PY SKV
Sbjct: 1003 PYASKV 1008
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 PYVSKV 6
PY SKV
Sbjct: 1003 PYASKV 1008
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 PYVSKV 6
PY SKV
Sbjct: 1003 PYASKV 1008
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PYVSKV 6
PY SKV
Sbjct: 1003 PYASKV 1008
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PYVSKV 6
PY SKV
Sbjct: 995 PYASKV 1000
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 1 PYVSKV 6
PY SKV
Sbjct: 1003 PYASKV 1008
>sp|V_PIV5|NON-STRUCTURAL protein V|Parainfluenza virus 5 (strain W3)
Query: 5 KVTGWC 10
KVT WC
Sbjct: 185 KVTEWC 190
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PYVSKVTGWC 10
PY + WC
Sbjct: 833 PYYKRCISWC 842
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 PYVSKVTGWC 10
PY + WC
Sbjct: 833 PYYKRYISWC 842
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 PYVSKVTGWC 10
PY + WC
Sbjct: 833 PYYKRYISWC 842
46|Sequence|226|235|VTGWCRDRLL
>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)
Query: 1 VTGWCRDR 8
VTGW RD+
Sbjct: 533 VTGWVRDQ 540
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 TGWCRD 7
+GWC D
Sbjct: 26 SGWCSD 31
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 4 WCRDRLL 10
WCR LL
Sbjct: 508 WCRQLLL 514
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 4 WCRDRLL 10
WCR LL
Sbjct: 508 WCRQLLL 514
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 WCRDRLL 10
WCR LL
Sbjct: 508 WCRQLLL 514
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 WCRDRLL 10
WCR LL
Sbjct: 508 WCRQLLL 514
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 4 WCRDRLL 10
WCR LL
Sbjct: 508 WCRQLLL 514
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 WCRDRLL 10
WCR LL
Sbjct: 508 WCRQLLL 514
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 3 GWCRD 7
GWC D
Sbjct: 337 GWCAD 341
>sp|UNG_HHV6Z|URACIL-DNA glycosylase|Human herpesvirus 6B (strain Z29)
Query: 1 VTGWCRDRLL 10
+ WCR+ +L
Sbjct: 139 LNSWCREGVL 148
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 TGWCRDRLL 10
TG C +RLL
Sbjct: 3219 TGVCVERLL 3227
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 TGWCRDRLL 10
TG C +RLL
Sbjct: 3219 TGVCVERLL 3227
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 VTGWCR 6
V WCR
Sbjct: 512 VNNWCR 517
>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)
Query: 1 VTGWCRDRL 9
V G CRD++
Sbjct: 436 VGGSCRDKI 444
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 2 TGWCR 6
T WCR
Sbjct: 513 TDWCR 517
>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 3 GWCRD 7
GWC D
Sbjct: 40 GWCLD 44
>sp|NSP1_ROTHD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 3 GWCRD 7
GWC D
Sbjct: 40 GWCLD 44
>sp|NSP1_ROTH6|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 3 GWCRD 7
GWC D
Sbjct: 40 GWCLD 44
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 3 GWCRD 7
GWC D
Sbjct: 40 GWCLD 44
>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 3 GWCRD 7
GWC D
Sbjct: 40 GWCLD 44
>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 3 GWCRD 7
GWC D
Sbjct: 40 GWCLD 44
>sp|NSP1_ROTHJ|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 3 GWCRD 7
GWC D
Sbjct: 40 GWCLD 44
>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 3 GWCRD 7
GWC D
Sbjct: 40 GWCLD 44
>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 3 GWCRD 7
GWC D
Sbjct: 40 GWCLD 44
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 3 GWCRD 7
GWC D
Sbjct: 40 GWCLD 44
>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 3 GWCRD 7
GWC D
Sbjct: 40 GWCLD 44
>sp|NSP1_ROTHU|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 3 GWCRD 7
GWC D
Sbjct: 40 GWCLD 44
>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 3 GWCRD 7
GWC D
Sbjct: 40 GWCLD 44
>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 3 GWCRD 7
GWC D
Sbjct: 40 GWCLD 44
>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VTGWCRD 7
+TG+CR+
Sbjct: 172 MTGFCRN 178
>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)
Query: 1 VTGWCRD 7
+TG+CR+
Sbjct: 172 MTGFCRN 178
>sp|NSP1_ROTH3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 3 GWCRD 7
GWC D
Sbjct: 40 GWCLD 44
>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)
Query: 1 VTGWCRD 7
+TG+CR+
Sbjct: 172 MTGFCRN 178
>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate
Query: 1 VTGWCRD 7
+TG+CR+
Sbjct: 172 MTGFCRN 178
>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)
Query: 1 VTGWCRD 7
+TG+CR+
Sbjct: 172 MTGFCRN 178
47|Sequence|231|240|RDRLLGHREP
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 2 DRLLGH 7
DR LGH
Sbjct: 82 DRFLGH 87
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 DRLLGH 7
DR LGH
Sbjct: 82 DRFLGH 87
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 2 DRLLGHRE 9
+RLLGH E
Sbjct: 96 ERLLGHLE 103
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 4 LLGHREP 10
L GHR+P
Sbjct: 835 LRGHRDP 841
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 4 LLGHREP 10
L GHR+P
Sbjct: 835 LRGHRDP 841
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 DRLLGHREP 10
D LG+++P
Sbjct: 791 DAFLGYKDP 799
>sp|MC160_MCV1|PROTEIN MC160|Molluscum contagiosum virus subtype 1
Query: 3 RLLGH 7
RLLGH
Sbjct: 84 RLLGH 88
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 4 LLGHR 8
LLGHR
Sbjct: 2285 LLGHR 2289
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 DRLLGHREP 10
D LG+++P
Sbjct: 791 DAFLGYKDP 799
>sp|VIF_HV1MP|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 RDRLLGHR 8
R+ +LGHR
Sbjct: 122 RNAILGHR 129
>sp|VIF_HV197|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 RDRLLGHR 8
R LLGHR
Sbjct: 121 RKALLGHR 128
>sp|PRTP_HHV2|PROCESSING and transport protein|Human herpesvirus 2 (HHV-2) (Human
Query: 2 DRLLGH 7
+RLLGH
Sbjct: 96 ERLLGH 101
48|Sequence|236|245|GHREPSAHPV
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 HREPSAHP 9
HR P+ HP
Sbjct: 404 HRVPTNHP 411
>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus
Query: 2 HREPSAHPV 10
H EPS PV
Sbjct: 451 HPEPSTSPV 459
>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)
Query: 2 HREPSAHPV 10
H EP+A PV
Sbjct: 261 HFEPAAEPV 269
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 GHREPSAHP 9
GH EP A P
Sbjct: 428 GHPEPRAFP 436
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GHREPSAH 8
G++EP AH
Sbjct: 792 GYQEPPAH 799
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GHREPSAH 8
G++EP AH
Sbjct: 775 GYQEPPAH 782
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 4 EPSAHP 9
+P AHP
Sbjct: 1007 QPGAHP 1012
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 2 HREPSAH 8
+R+PS H
Sbjct: 58 YRQPSPH 64
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 5 PSAHP 9
P+AHP
Sbjct: 236 PTAHP 240
49|Sequence|241|250|SAHPVEVFSF
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 2 AHPVEVFSF 10
+ PV+++SF
Sbjct: 420 SQPVDLYSF 428
>sp|GAG_HV193|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 SAHPVEVFSF 10
SA P E F F
Sbjct: 451 SAPPAESFRF 460
>sp|VE2_HPV10|REGULATORY protein E2|Human papillomavirus type 10
Query: 1 SAHPV 5
SAHPV
Sbjct: 283 SAHPV 287
>sp|NS1_INBLE|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Lee/1940)
Query: 3 HPVEV 7
HP+EV
Sbjct: 141 HPIEV 145
>sp|NS1_INBGL|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GL/1954)
Query: 3 HPVEV 7
HP+EV
Sbjct: 141 HPIEV 145
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 2 AHPVEVFSF 10
A PV +FS+
Sbjct: 45 AEPVYIFSY 53
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 SAHPVE 6
S HPVE
Sbjct: 960 SLHPVE 965
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 1 SAHPVE 6
S HPVE
Sbjct: 960 SLHPVE 965
>sp|VL2_HPV55|MINOR capsid protein L2|Human papillomavirus type 55
Query: 1 SAHPVE 6
S+HPVE
Sbjct: 187 SSHPVE 192
50|Sequence|246|255|EVFSFDLHEP
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 5 FDLHEP 10
FDLH P
Sbjct: 701 FDLHSP 706
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 FSFDLHEP 10
F+FDL+ P
Sbjct: 2832 FTFDLNRP 2839
>sp|VL2_HPV22|MINOR capsid protein L2|Human papillomavirus 22
Query: 3 FSFDLHEP 10
+SFD+ EP
Sbjct: 232 YSFDIEEP 239
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 4 SFDLHEP 10
+FDLH P
Sbjct: 65 NFDLHVP 71
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 4 SFDLHEP 10
+FDLH P
Sbjct: 65 NFDLHVP 71
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 1 EVFSFDLH 8
EV FDLH
Sbjct: 684 EVDRFDLH 691
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 5 FDLHEP 10
FDLH P
Sbjct: 610 FDLHFP 615
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VFSFDLHEP 10
VFS +H P
Sbjct: 466 VFSLTVHAP 474
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VFSFDLHEP 10
VFS +H P
Sbjct: 466 VFSLTVHAP 474
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 FSFDLH 8
FSFDL+
Sbjct: 1213 FSFDLN 1218
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 FSFDLH 8
FSFDL+
Sbjct: 1193 FSFDLN 1198
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 FSFDLH 8
FSFDL+
Sbjct: 1213 FSFDLN 1218
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 FSFDLH 8
FSFDL+
Sbjct: 1243 FSFDLN 1248
>sp|VL2_HPV19|MINOR capsid protein L2|Human papillomavirus 19
Query: 3 FSFDLHEP 10
+SF++ EP
Sbjct: 233 YSFEIEEP 240
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 FSFDLH 8
FSFDL+
Sbjct: 1193 FSFDLN 1198
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 FSFDLH 8
FSFDL+
Sbjct: 1243 FSFDLN 1248
>sp|VL2_HPV38|MINOR capsid protein L2|Human papillomavirus 38
Query: 3 FSFDLHEP 10
+SF++ EP
Sbjct: 235 YSFEIEEP 242
>sp|VL2_HPV14|MINOR capsid protein L2|Human papillomavirus 14
Query: 3 FSFDLHEP 10
+SF++ EP
Sbjct: 234 YSFEIEEP 241
>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21
Query: 3 FSFDLHEP 10
+SF++ EP
Sbjct: 234 YSFEIEEP 241
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 1 EVFSFDLHEP 10
+V+S LH P
Sbjct: 162 DVYSRTLHSP 171
>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20
Query: 3 FSFDLHEP 10
+SF++ EP
Sbjct: 234 YSFEIEEP 241
>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12
Query: 3 FSFDLHEP 10
+SF++ EP
Sbjct: 234 YSFEIEEP 241
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 EVFSFD 6
E+FSFD
Sbjct: 605 ELFSFD 610
51|Sequence|251|260|DLHEPLSKER
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 3 HEPLSKER 10
HEP+ +ER
Sbjct: 1826 HEPMVEER 1833
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 3 HEPLSKER 10
HEP+ +ER
Sbjct: 1825 HEPMVEER 1832
>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)
Query: 1 DLHEPL 6
D HEPL
Sbjct: 47 DTHEPL 52
>sp|UL92_HHV7J|PROTEIN U63|Human herpesvirus 7 (strain JI)
Query: 1 DLHEPLSKE 9
+LH PL+ E
Sbjct: 27 NLHNPLTFE 35
>sp|U61_HHV6U|UNCHARACTERIZED protein U61|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 EPLSKER 10
EPL KER
Sbjct: 69 EPLYKER 75
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 DLHEPLSKER 10
DL+ PLS ++
Sbjct: 467 DLYNPLSCDK 476
>sp|VE4_HPV13|PROTEIN E4|Human papillomavirus 13
Query: 1 DLHEPLSKER 10
DLH PL R
Sbjct: 50 DLHVPLETPR 59
52|Sequence|256|265|LSKERVEAFS
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LSKERVEAFS 10
LSKE++EA +
Sbjct: 612 LSKEKIEALT 621
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 LSKERVEAF 9
L+ ERV+AF
Sbjct: 1884 LTPERVQAF 1892
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 LSKERVEAF 9
L+ ERV+AF
Sbjct: 1881 LTPERVQAF 1889
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LSKERVEAFS 10
LS+E++EA +
Sbjct: 614 LSREKIEALT 623
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 LSKERVEAF 9
L+KE++EA
Sbjct: 637 LTKEKIEAL 645
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 LSKERVEAF 9
L+KE++EA
Sbjct: 635 LTKEKIEAL 643
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 LSKERVEAF 9
L+KE++EA
Sbjct: 638 LTKEKIEAL 646
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 LSKERVEAF 9
L+KE++EA
Sbjct: 637 LTKEKIEAL 645
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 LSKERVEAF 9
L+KE++EA
Sbjct: 637 LTKEKIEAL 645
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 LSKERVEAFS 10
L K RV+AF+
Sbjct: 1138 LVKSRVQAFN 1147
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 LSKERVEAF 9
L+KE++EA
Sbjct: 636 LTKEKIEAL 644
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 LSKERVEAF 9
L+KE++EA
Sbjct: 638 LTKEKIEAL 646
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 LSKERVEAF 9
L+KE++EA
Sbjct: 637 LTKEKIEAL 645
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 LSKERVEA 8
L+KE VEA
Sbjct: 1640 LAKEEVEA 1647
>sp|E3GL_ADE03|EARLY E3 18.5 kDa glycoprotein|Human adenovirus B serotype 3
Query: 2 SKERVEAFS 10
SKE + AFS
Sbjct: 127 SKENIVAFS 135
>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 SKERVEAF 9
S ERVE F
Sbjct: 33 SGERVEVF 40
>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 SKERVEAF 9
S ERVE F
Sbjct: 33 SGERVEVF 40
>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 SKERVEAF 9
S ERVE F
Sbjct: 33 SGERVEVF 40
53|Sequence|261|270|VEAFSDGVYA
>sp|VL2_HPV36|MINOR capsid protein L2|Human papillomavirus 36
Query: 1 VEAFSD 6
VEAFSD
Sbjct: 415 VEAFSD 420
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 VEAFSDGVY 9
V F+DGVY
Sbjct: 83 VLPFNDGVY 91
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VEAFSDGV 8
V AFSDG+
Sbjct: 91 VVAFSDGL 98
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VEAFSDGV 8
V AFSDG+
Sbjct: 91 VVAFSDGL 98
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VEAFSDGV 8
V AFSDG+
Sbjct: 91 VVAFSDGL 98
>sp|VE6_HPV39|PROTEIN E6|Human papillomavirus 39
Query: 4 FSDGVYA 10
+SD VYA
Sbjct: 81 YSDSVYA 87
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 VEAFSDG 7
VE F+DG
Sbjct: 3149 VEVFTDG 3155
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 VEAFSDG 7
VE F+DG
Sbjct: 3149 VEVFTDG 3155
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 2 EAFSDG 7
EAFS+G
Sbjct: 388 EAFSEG 393
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 2 EAFSDG 7
EAFS+G
Sbjct: 388 EAFSEG 393
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 2 EAFSDG 7
EAFS+G
Sbjct: 388 EAFSEG 393
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 2 EAFSDG 7
EAFS+G
Sbjct: 390 EAFSEG 395
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 2 EAFSDG 7
EAFS+G
Sbjct: 390 EAFSEG 395
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 2 EAFSDG 7
EAFS+G
Sbjct: 390 EAFSEG 395
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 2 EAFSDG 7
EAFS+G
Sbjct: 388 EAFSEG 393
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 2 EAFSDG 7
EAFS+G
Sbjct: 390 EAFSEG 395
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 2 EAFSDG 7
EAF DG
Sbjct: 171 EAFGDG 176
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 VEAFSDGVY 9
V F DGV+
Sbjct: 1512 VGVFQDGVF 1520
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 VEAFSDGVY 9
V F DGV+
Sbjct: 1513 VGVFQDGVF 1521
>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)
Query: 1 VEAFSDGVY 9
++ FS+G Y
Sbjct: 225 IKQFSNGAY 233
>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)
Query: 1 VEAFSDGVY 9
++ FS+G Y
Sbjct: 225 IKQFSNGAY 233
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 4 FSDGVY 9
F DG+Y
Sbjct: 83 FKDGIY 88
>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])
Query: 1 VEAFSDGVY 9
++ FS+G Y
Sbjct: 225 IKQFSNGAY 233
>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)
Query: 4 FSDGVY 9
SDGVY
Sbjct: 758 LSDGVY 763
>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])
Query: 1 VEAFSDGVY 9
++ FS+G Y
Sbjct: 225 IKQFSNGAY 233
>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 1 VEAFSDGVY 9
++ FS+G Y
Sbjct: 225 IKQFSNGAY 233
>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])
Query: 1 VEAFSDGVY 9
++ FS+G Y
Sbjct: 225 IKQFSNGAY 233
>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])
Query: 1 VEAFSDGVY 9
++ FS+G Y
Sbjct: 225 IKQFSNGAY 233
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 1 VEAFSDGVY 9
++ FS+G Y
Sbjct: 225 IKQFSNGAY 233
54|Sequence|266|275|DGVYAIVATL
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 DGVYAIVATL 10
D VY I+A L
Sbjct: 284 DAVYNIIALL 293
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 DGVYAIVATL 10
D VY I+A L
Sbjct: 284 DAVYNIIALL 293
>sp|VPR_HV1V9|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 1 DGVYAIVATL 10
+GV AI+ TL
Sbjct: 55 EGVEAIIRTL 64
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 DGVYAI 6
DGVY I
Sbjct: 1500 DGVYTI 1505
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 1 DGVYAIV 7
DG+Y I+
Sbjct: 499 DGMYTII 505
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 DGVYAIV 7
DG+Y I+
Sbjct: 499 DGMYTII 505
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 1 DGVYAIV 7
DG+Y I+
Sbjct: 499 DGMYTII 505
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 DGVYAIVATL 10
DGV ATL
Sbjct: 286 DGVLVTTATL 295
55|Sequence|271|280|IVATLLILDI
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 VATLLILDI 10
+ TLL+LDI
Sbjct: 1017 LGTLLVLDI 1025
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 VATLLILDI 10
++TLLI+D+
Sbjct: 986 LSTLLIMDV 994
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 VATLLILDI 10
++TLLI+D+
Sbjct: 978 LSTLLIMDV 986
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 VATLLILDI 10
++TLL++D+
Sbjct: 977 LSTLLVMDV 985
56|Sequence|276|285|LILDICEDNV
>sp|VE2_HPV11|REGULATORY protein E2|Human papillomavirus 11
Query: 3 LDICEDNV 10
D CEDNV
Sbjct: 121 FDGCEDNV 128
>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3
Query: 3 LDICEDNV 10
LD+C+D +
Sbjct: 8 LDVCQDKI 15
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 2 ILDICEDNV 10
ILDIC D++
Sbjct: 803 ILDICIDDM 811
>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28
Query: 3 LDICEDNV 10
LD+C+D +
Sbjct: 8 LDVCQDKM 15
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 3 LDICEDNV 10
LDI E+NV
Sbjct: 298 LDILEENV 305
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 3 LDICEDNV 10
LDI E+NV
Sbjct: 298 LDILEENV 305
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 3 LDICEDNV 10
LDI E+NV
Sbjct: 298 LDILEENV 305
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 ILDICEDNV 10
ILDIC+ V
Sbjct: 4501 ILDICQARV 4509
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 ILDICED 8
+LD+C+D
Sbjct: 375 VLDVCDD 381
>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 2 ILDICED 8
+LD+C+D
Sbjct: 375 VLDVCDD 381
>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 ILDICED 8
+LD+C+D
Sbjct: 375 VLDVCDD 381
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 3 LDICEDNV 10
LD+ E+NV
Sbjct: 290 LDVLEENV 297
>sp|U79_HHV7J|PROTEIN U79|Human herpesvirus 7 (strain JI)
Query: 2 ILDICEDN 9
+L IC DN
Sbjct: 110 VLTICHDN 117
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 LILDIC 6
+ILDIC
Sbjct: 341 MILDIC 346
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LDICEDN 9
L IC DN
Sbjct: 600 LAICHDN 606
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LDICEDN 9
L IC DN
Sbjct: 600 LAICHDN 606
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 DICEDNV 10
++CED V
Sbjct: 156 EMCEDTV 162
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 DICEDNV 10
++CED V
Sbjct: 156 EMCEDTV 162
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 DICEDNV 10
++CED V
Sbjct: 156 EMCEDTV 162
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 DICEDNV 10
++CED V
Sbjct: 156 EMCEDTV 162
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 DICEDNV 10
++CED V
Sbjct: 156 EMCEDTV 162
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 3 LDICEDNV 10
++CE+N+
Sbjct: 250 FNLCEENI 257
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 3 LDICEDNV 10
++CE+N+
Sbjct: 250 FNLCEENI 257
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 3 LDICEDNV 10
++CE+N+
Sbjct: 250 FNLCEENI 257
>sp|UL76_HCMVM|PROTEIN UL76|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LDICEDNV 10
D+C D+V
Sbjct: 178 FDLCTDSV 185
>sp|UL76_HCMVA|PROTEIN UL76|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LDICEDNV 10
D+C D+V
Sbjct: 178 FDLCTDSV 185
>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)
Query: 2 ILDICEDNV 10
I+D C++N+
Sbjct: 309 IMDYCQNNL 317
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 5 ICEDN 9
IC+DN
Sbjct: 114 ICDDN 118
>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 ILDICEDNV 10
I+D C++N+
Sbjct: 309 IMDYCQNNL 317
>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate
Query: 5 ICEDNV 10
ICE+N+
Sbjct: 272 ICEENL 277
>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 2 ILDICED 8
ILDIC++
Sbjct: 375 ILDICDN 381
>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)
Query: 5 ICEDNV 10
+CED+V
Sbjct: 358 VCEDHV 363
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 3 LDICEDNV 10
LD+C++ +
Sbjct: 8 LDVCQEQL 15
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 3 LDICEDNV 10
LD+C++ +
Sbjct: 8 LDVCQEQL 15
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 DICEDNV 10
++CED +
Sbjct: 57 ELCEDTI 63
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 DICEDNV 10
++CED +
Sbjct: 157 ELCEDTI 163
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 DICEDNV 10
++CED +
Sbjct: 157 ELCEDTI 163
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 DICEDNV 10
++CED +
Sbjct: 157 ELCEDTI 163
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 DICEDNV 10
++CED +
Sbjct: 157 ELCEDTI 163
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 DICEDNV 10
++CED +
Sbjct: 157 ELCEDTI 163
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 4 DICEDNV 10
++CED +
Sbjct: 157 ELCEDTI 163
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 DICEDNV 10
++CED +
Sbjct: 157 ELCEDTI 163
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 DICEDNV 10
++CED +
Sbjct: 157 ELCEDTI 163
57|Sequence|281|290|CEDNVPDPKD
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EDNVPDPK 9
E NVPDP+
Sbjct: 506 EQNVPDPQ 513
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EDNVPDPK 9
E NVPDP+
Sbjct: 506 EQNVPDPQ 513
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EDNVPDPK 9
E NVPDP+
Sbjct: 506 EQNVPDPQ 513
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EDNVPDPK 9
E NVPDP+
Sbjct: 506 EQNVPDPQ 513
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EDNVPDPK 9
E NVPDP+
Sbjct: 506 EQNVPDPQ 513
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EDNVPDPK 9
E NVPDP+
Sbjct: 506 EQNVPDPQ 513
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EDNVPDPK 9
E NVPDP+
Sbjct: 506 EQNVPDPQ 513
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EDNVPDPK 9
E NVPDP+
Sbjct: 506 EQNVPDPQ 513
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EDNVPDPK 9
E NVPDP+
Sbjct: 506 EQNVPDPQ 513
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 EDNVPDPKD 10
EDNV +P+D
Sbjct: 475 EDNVTNPED 483
>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EDNVPDPK 9
E NVPDP+
Sbjct: 16 EQNVPDPQ 23
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 EDNVPDPKD 10
EDNV +P+D
Sbjct: 475 EDNVTNPED 483
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 2 EDNVPDPKD 10
EDNV +P+D
Sbjct: 475 EDNVTNPED 483
>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 EDNVPDPKD 10
+DN+P+ KD
Sbjct: 537 DDNIPELKD 545
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 1 CEDNVPDP 8
C DNVP P
Sbjct: 433 CPDNVPPP 440
>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)
Query: 2 EDNVPDPKD 10
+DN+P+ KD
Sbjct: 537 DDNIPELKD 545
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EDNVPDPK 9
+ NVPDP+
Sbjct: 485 KQNVPDPQ 492
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EDNVPDPK 9
+ NVPDP+
Sbjct: 506 KQNVPDPQ 513
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EDNVPDPK 9
+ NVPDP+
Sbjct: 506 KQNVPDPQ 513
>sp|US10_CHV1|VIRION protein US10 homolog|Cercopithecine herpesvirus 1 (CeHV-1)
Query: 1 CEDNVPDPKD 10
CED P+D
Sbjct: 50 CEDGTSGPRD 59
>sp|C_NIPAV|PROTEIN C|Nipah virus
Query: 2 EDNVPD 7
E+NVPD
Sbjct: 113 EENVPD 118
>sp|Y113_ADE07|UNCHARACTERIZED 11.3 kDa early protein|Human adenovirus B serotype 7
Query: 1 CEDNVPDPK 9
C N PDPK
Sbjct: 36 CASNKPDPK 44
>sp|C_HENDH|PROTEIN C|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 EDNVPD 7
E+NVPD
Sbjct: 113 EENVPD 118
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 1 CEDNVPDP 8
C D+VP+P
Sbjct: 175 CADDVPNP 182
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 5 VPDPKD 10
+PDPKD
Sbjct: 1164 LPDPKD 1169
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 4 NVPDPK 9
N PDP+
Sbjct: 54 NTPDPQ 59
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 EDNVPDPKD 10
+ VPDP++
Sbjct: 2881 DTRVPDPQE 2889
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 EDNVPDPKD 10
+ VPDP++
Sbjct: 2881 DTRVPDPQE 2889
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 EDNVPDPKD 10
+ VPDP++
Sbjct: 2877 DTRVPDPQE 2885
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 4 NVPDPK 9
N PDP+
Sbjct: 54 NTPDPQ 59
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 4 NVPDPK 9
N PDP+
Sbjct: 54 NTPDPQ 59
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 1 CEDNVP 6
CE+N+P
Sbjct: 261 CEENIP 266
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 1 CEDNVP 6
CE+N+P
Sbjct: 253 CEENIP 258
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 1 CEDNVP 6
CE+N+P
Sbjct: 253 CEENIP 258
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 1 CEDNVP 6
CE+N+P
Sbjct: 253 CEENIP 258
>sp|US03_HCMVT|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 DNVPDPKD 10
D+VP P D
Sbjct: 19 DSVPRPLD 26
>sp|US03_HCMVA|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 DNVPDPKD 10
D+VP P D
Sbjct: 19 DSVPRPLD 26
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 4 NVPDPKD 10
N+P P D
Sbjct: 1017 NIPSPTD 1023
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 5 VPDPKD 10
VPDP+D
Sbjct: 949 VPDPED 954
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 5 VPDPKD 10
+PDP+D
Sbjct: 922 IPDPED 927
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 2 EDNVPDPKD 10
ED PD KD
Sbjct: 199 EDKRPDKKD 207
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 2 EDNVPDPKD 10
ED PD KD
Sbjct: 199 EDKRPDKKD 207
>sp|PG125_VAR67|SCAFFOLD protein OPG125|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 DNVPD 7
DNVPD
Sbjct: 333 DNVPD 337
>sp|D13_VARV|SCAFFOLD protein D13|Variola virus
Query: 3 DNVPD 7
DNVPD
Sbjct: 333 DNVPD 337
>sp|PG125_VACCT|SCAFFOLD protein OPG125|Vaccinia virus (strain Tian Tan)
Query: 3 DNVPD 7
DNVPD
Sbjct: 333 DNVPD 337
>sp|PG125_VACCC|SCAFFOLD protein OPG125|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 DNVPD 7
DNVPD
Sbjct: 333 DNVPD 337
>sp|PG125_VACCA|SCAFFOLD protein OPG125|Vaccinia virus (strain Ankara) (VACV)
Query: 3 DNVPD 7
DNVPD
Sbjct: 333 DNVPD 337
>sp|PG125_MONPV|SCAFFOLD protein OPG125|Monkeypox virus (MPXV)
Query: 3 DNVPD 7
DNVPD
Sbjct: 333 DNVPD 337
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 2 EDNVPDPK 9
ED P P+
Sbjct: 464 EDEAPSPR 471
>sp|TEG7_HHV11|TEGUMENT protein UL51|Human herpesvirus 1 (strain 17)
Query: 3 DNVPDPK 9
D +PDPK
Sbjct: 205 DALPDPK 211
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 4 NVPDPK 9
N PDPK
Sbjct: 246 NPPDPK 251
58|Sequence|286|295|PDPKDVKERF
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PDPKDVKERF 10
PD KD +RF
Sbjct: 367 PDAKDTLDRF 376
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 1 PDPKDVKER 9
P P DVK+R
Sbjct: 193 PKPTDVKQR 201
>sp|VE6_HPV09|PROTEIN E6|Human papillomavirus 9
Query: 1 PDPKDVKE 8
P P+ VKE
Sbjct: 11 PKPRTVKE 18
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 PDPKDVKE 8
P PK+VK+
Sbjct: 1510 PAPKEVKK 1517
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 PDPKDVKE 8
P PK+VK+
Sbjct: 1510 PAPKEVKK 1517
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 PDPKDVKE 8
P PK+VK+
Sbjct: 1506 PAPKEVKK 1513
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 PDPKDVKER 9
P+P VKER
Sbjct: 155 PEPIVVKER 163
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 3 PKDVKERF 10
PKD+KE+
Sbjct: 318 PKDLKEKL 325
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 1 PDPKDVK 7
PDP+DV+
Sbjct: 923 PDPEDVR 929
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 3 PKDVKERF 10
PKD+KE+
Sbjct: 318 PKDLKEKL 325
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 PKDVKE 8
PKD+KE
Sbjct: 597 PKDLKE 602
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 PKDVKE 8
PKD+KE
Sbjct: 597 PKDLKE 602
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 DPKDVKER 9
+PK +KER
Sbjct: 3123 NPKGLKER 3130
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 DPKDVKER 9
+PK +KER
Sbjct: 3123 NPKGLKER 3130
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 PKDVKE 8
PKD+KE
Sbjct: 597 PKDLKE 602
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 DPKDVKER 9
+PK +KER
Sbjct: 3123 NPKGLKER 3130
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 DPKDVKER 9
+PK +KER
Sbjct: 3123 NPKGLKER 3130
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 DPKDVKER 9
+PK +KER
Sbjct: 3123 NPKGLKER 3130
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 PDPKDV 6
PDPKD+
Sbjct: 1165 PDPKDI 1170
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 PDPKDVK 7
P+P++VK
Sbjct: 78 PNPQEVK 84
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 1 PDPKDVK 7
PDP+DV+
Sbjct: 950 PDPEDVR 956
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 1 PDPKDVK 7
PDP+DV+
Sbjct: 838 PDPEDVR 844
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 1 PDPKDVK 7
PDP+DV+
Sbjct: 838 PDPEDVR 844
>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)
Query: 1 PDPKDVK 7
PD DVK
Sbjct: 174 PDENDVK 180
>sp|UNG_HHV8P|URACIL-DNA glycosylase|Human herpesvirus 8 type P
Query: 2 DPKDVK 7
DP+D+K
Sbjct: 76 DPEDIK 81
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 PDPKDVK 7
P+P+D K
Sbjct: 898 PNPQDTK 904
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 2 DPKDVKER 9
DP+D+K++
Sbjct: 879 DPRDLKQQ 886
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 2 DPKDVKER 9
DP+D+K++
Sbjct: 879 DPRDLKQQ 886
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 PDPKDV 6
PD KDV
Sbjct: 1016 PDSKDV 1021
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 PDPKDV 6
PD KDV
Sbjct: 1016 PDSKDV 1021
>sp|UNG_EBVB9|URACIL-DNA glycosylase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 DPKDVK 7
DP D+K
Sbjct: 79 DPSDIK 84
59|Sequence|291|300|VKERFSGSLV
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 VKERFSGSL 9
V +RFSG+L
Sbjct: 3180 VDDRFSGAL 3188
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 1 VKERFSGSL 9
+KERFS L
Sbjct: 445 LKERFSSDL 453
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 2 KERFSGS 8
+ERF GS
Sbjct: 70 QERFEGS 76
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 2 KERFSGSL 9
+ER SGS+
Sbjct: 1923 RERISGSI 1930
>sp|VL1_HPV64|MAJOR capsid protein L1|Human papillomavirus type 64
Query: 1 VKERFSGSL 9
+KE+FS L
Sbjct: 138 LKEKFSAEL 146
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 1 VKERFSGSL 9
+KE+FS L
Sbjct: 476 LKEKFSAEL 484
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 1 VKERFSGSL 9
+KE+FS L
Sbjct: 480 LKEKFSADL 488
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 1 VKERFSGSL 9
+KE+FS L
Sbjct: 476 LKEKFSADL 484
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 1 VKERFSGSL 9
+KE+FS L
Sbjct: 481 LKEKFSADL 489
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 1 VKERFSGSL 9
+KE+FS L
Sbjct: 449 LKEKFSADL 457
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 1 VKERFSGSL 9
+KE+FS L
Sbjct: 450 LKEKFSADL 458
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 1 VKERFSGSL 9
+KE+FS L
Sbjct: 452 LKEKFSADL 460
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 1 VKERFSGSL 9
+KE+FS L
Sbjct: 451 LKEKFSADL 459
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 1 VKERFSGSL 9
+KE+FS L
Sbjct: 452 LKEKFSSEL 460
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 1 VKERFSGSL 9
+KE+FS L
Sbjct: 446 LKEKFSSEL 454
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 1 VKERFSGSL 9
+KE+FS L
Sbjct: 446 LKEKFSSEL 454
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 1 VKERFSGSL 9
+KE+FS L
Sbjct: 452 LKEKFSSEL 460
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 1 VKERFSGSL 9
+KE+FS L
Sbjct: 446 LKEKFSSEL 454
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 1 VKERFSGSL 9
+KE+FS L
Sbjct: 447 LKEKFSSEL 455
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 1 VKERFSGSL 9
+KE+FS L
Sbjct: 481 LKEKFSSDL 489
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 VKERFSGS 8
+KE+F G+
Sbjct: 677 IKEKFPGN 684
60|Sequence|296|305|SGSLVAALSA
>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)
Query: 2 GSLVAAL 8
GSL+AAL
Sbjct: 348 GSLLAAL 354
>sp|GD_HHV1A|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Angelotti)
Query: 2 GSLVAAL 8
GSL+AAL
Sbjct: 349 GSLLAAL 355
>sp|GD_HHV1P|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Patton)
Query: 2 GSLVAAL 8
GSL+AAL
Sbjct: 349 GSLLAAL 355
>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)
Query: 2 GSLVAAL 8
GSL+AAL
Sbjct: 349 GSLLAAL 355
>sp|GD_HHV1K|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain KOS)
Query: 2 GSLVAAL 8
GSL+AAL
Sbjct: 349 GSLLAAL 355
>sp|GD_HHV1F|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain F)
Query: 2 GSLVAAL 8
GSL+AAL
Sbjct: 349 GSLLAAL 355
61|Sequence|301|310|AALSATGPRF
>sp|VP30_EBOSU|TRANSCRIPTIONAL activator VP30|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 SATGPRF 10
++TGP+F
Sbjct: 19 NSTGPQF 25
62|Sequence|306|315|TGPRFLAYFG
>sp|VE6_HPV09|PROTEIN E6|Human papillomavirus 9
Query: 4 RFLAYF 9
RFL+YF
Sbjct: 39 RFLSYF 44
>sp|PG145_VARV|TRANSCRIPT termination protein OPG145|Variola virus
Query: 4 RFLAYF 9
RFLAY+
Sbjct: 221 RFLAYY 226
>sp|PG145_VAR67|TRANSCRIPT termination protein OPG145|Variola virus (isolate
Query: 4 RFLAYF 9
RFLAY+
Sbjct: 221 RFLAYY 226
>sp|PG145_VACCC|TRANSCRIPT termination protein OPG145|Vaccinia virus (strain Copenhagen)
Query: 4 RFLAYF 9
RFLAY+
Sbjct: 221 RFLAYY 226
>sp|PG145_MONPV|TRANSCRIPT termination protein OPG145|Monkeypox virus (MPXV)
Query: 4 RFLAYF 9
RFLAY+
Sbjct: 221 RFLAYY 226
>sp|A18_VACCT|TRANSCRIPT termination protein A18|Vaccinia virus (strain Tian Tan)
Query: 4 RFLAYF 9
RFLAY+
Sbjct: 221 RFLAYY 226
>sp|A18_VACCA|TRANSCRIPT termination protein A18|Vaccinia virus (strain Ankara) (VACV)
Query: 4 RFLAYF 9
RFLAY+
Sbjct: 221 RFLAYY 226
>sp|A18_CWPXG|TRANSCRIPT termination protein A18|Cowpox virus (strain GRI-90 /
Query: 4 RFLAYF 9
RFLAY+
Sbjct: 221 RFLAYY 226
>sp|A18_CWPXB|TRANSCRIPT termination protein A18|Cowpox virus (strain Brighton Red)
Query: 4 RFLAYF 9
RFLAY+
Sbjct: 221 RFLAYY 226
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 2 GPRFLAYFG 10
GP+ +AY G
Sbjct: 271 GPQTMAYGG 279
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 2 GPRFLAYFG 10
P +LA FG
Sbjct: 434 APLYLALFG 442
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 RFLAYFG 10
+FL Y+G
Sbjct: 905 KFLCYYG 911
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 RFLAYFG 10
+FL Y+G
Sbjct: 905 KFLCYYG 911
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TGPRFL 6
T PRFL
Sbjct: 89 TSPRFL 94
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TGPRFL 6
T PRFL
Sbjct: 89 TSPRFL 94
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 RFLAYFG 10
RF+++FG
Sbjct: 254 RFISFFG 260
63|Sequence|311|320|LAYFGSFATV
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 AYFGSFAT 9
A +GSFAT
Sbjct: 833 ALYGSFAT 840
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 AYFGSFAT 9
A +GSFAT
Sbjct: 706 ALYGSFAT 713
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 2 AYFGSFAT 9
A +GSFAT
Sbjct: 766 ALYGSFAT 773
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 2 AYFGSFAT 9
A +GSFAT
Sbjct: 842 ALYGSFAT 849
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 2 AYFGSFAT 9
A +GSFAT
Sbjct: 837 ALYGSFAT 844
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 2 AYFGSFAT 9
A +GSFAT
Sbjct: 842 ALYGSFAT 849
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 YFGSFA 8
YFG+FA
Sbjct: 838 YFGTFA 843
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 YFGSFA 8
YFG+FA
Sbjct: 838 YFGTFA 843
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 YFGSFA 8
YFG+FA
Sbjct: 838 YFGTFA 843
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 YFGSFA 8
YFG+FA
Sbjct: 838 YFGTFA 843
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 YFGSFA 8
YFG+FA
Sbjct: 838 YFGTFA 843
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 YFGSFA 8
YFG+FA
Sbjct: 838 YFGTFA 843
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 YFGSFA 8
YFG+FA
Sbjct: 838 YFGTFA 843
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 LAYFGSFATV 10
LA+FG A V
Sbjct: 1071 LAFFGDVADV 1080
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 LAYFGSFATV 10
LA+FG A V
Sbjct: 1071 LAFFGDVADV 1080
>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P
Query: 1 LAYFGSF 7
L YFG F
Sbjct: 102 LIYFGQF 108
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 1 LAYFGSFA 8
L YFG+F
Sbjct: 808 LKYFGNFG 815
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 YFGSFA 8
YFG+F+
Sbjct: 827 YFGNFS 832
>sp|RIR2_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 8 type P
Query: 1 LAYFGSFATV 10
L+Y GSF V
Sbjct: 278 LSYTGSFKAV 287
>sp|UL79_HHV8P|PROTEIN UL79 homolog|Human herpesvirus 8 type P
Query: 1 LAYFGSF 7
LAY G+F
Sbjct: 246 LAYLGAF 252
>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)
Query: 1 LAYFGSFATV 10
+AY G+F +V
Sbjct: 456 VAYLGAFLSV 465
>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)
Query: 1 LAYFGSFATV 10
+AY G+F +V
Sbjct: 456 VAYLGAFLSV 465
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 2 AYFGSF 7
A+FGS+
Sbjct: 1382 AFFGSY 1387
>sp|TRX1_HHV6U|TRIPLEX capsid protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LAYFGS 6
L+YFGS
Sbjct: 251 LSYFGS 256
>sp|TRX1_HHV6Z|TRIPLEX capsid protein 1|Human herpesvirus 6B (strain Z29)
Query: 1 LAYFGS 6
L+YFGS
Sbjct: 251 LSYFGS 256
>sp|TRX1_HHV6H|TRIPLEX capsid protein 1|Human herpesvirus 6B (HHV-6 variant
Query: 1 LAYFGS 6
L+YFGS
Sbjct: 251 LSYFGS 256
64|Sequence|316|325|SFATVGLLWF
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 ATVGLLWF 10
AT+ LLWF
Sbjct: 2203 ATIFLLWF 2210
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 ATVGLLWF 10
AT+ LLWF
Sbjct: 2203 ATIFLLWF 2210
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 ATVGLLW 9
AT+G+LW
Sbjct: 2175 ATLGILW 2181
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 ATVGLLW 9
AT+G+LW
Sbjct: 2175 ATLGILW 2181
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 ATVGLLWF 10
ATV L WF
Sbjct: 2291 ATVFLFWF 2298
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 ATVGLLWF 10
ATV L WF
Sbjct: 2261 ATVFLFWF 2268
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 ATVGLLWF 10
ATV L WF
Sbjct: 2241 ATVFLFWF 2248
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 ATVGLLWF 10
ATV L WF
Sbjct: 2291 ATVFLFWF 2298
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 ATVGLLWF 10
ATV L WF
Sbjct: 2261 ATVFLFWF 2268
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 ATVGLLWF 10
ATV L WF
Sbjct: 2241 ATVFLFWF 2248
>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)
Query: 5 VGLLW 9
VGLLW
Sbjct: 190 VGLLW 194
>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)
Query: 5 VGLLW 9
VGLLW
Sbjct: 190 VGLLW 194
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 1 SFATVGLLWF 10
+FA VGL F
Sbjct: 471 TFANVGLTSF 480
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 1 SFATVGLLWF 10
+FA VGL F
Sbjct: 468 AFANVGLTSF 477
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 FATVGLLW 9
AT+G++W
Sbjct: 2172 LATLGVIW 2179
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 FATVGLLW 9
AT+G++W
Sbjct: 2172 LATLGVIW 2179
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 FATVGLLW 9
AT+G++W
Sbjct: 2172 LATLGVVW 2179
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 FATVGLLW 9
AT+G++W
Sbjct: 2172 LATLGVVW 2179
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 FATVGLLW 9
AT+G++W
Sbjct: 2172 LATLGVVW 2179
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 FATVGLLW 9
AT+G++W
Sbjct: 2172 LATLGVVW 2179
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 ATVGLLW 9
AT+G++W
Sbjct: 2174 ATLGVVW 2180
65|Sequence|321|330|GLLWFAHHSL
>sp|AN_VZVO|ALKALINE nuclease|Varicella-zoster virus (strain Oka vaccine)
Query: 4 WFAHHS 9
WF HH+
Sbjct: 165 WFYHHN 170
>sp|AN_VZVD|ALKALINE nuclease|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 WFAHHS 9
WF HH+
Sbjct: 165 WFYHHN 170
>sp|NCAP_CVHN1|NUCLEOPROTEIN coronavirus HKU1 (isolate N1)
Query: 1 GLLWFAHH 8
G+ W A+H
Sbjct: 143 GVFWVANH 150
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 2 LLWFAHHS 9
++W HHS
Sbjct: 187 IIWGIHHS 194
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 2 LLWFAHHS 9
++W HHS
Sbjct: 187 IIWGIHHS 194
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 2 LLWFAHHS 9
++W HHS
Sbjct: 187 IIWGIHHS 194
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 2 LLWFAHHS 9
++W HHS
Sbjct: 187 IIWGIHHS 194
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 2 LLWFAHHS 9
++W HHS
Sbjct: 187 IIWGIHHS 194
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 2 LLWFAHHS 9
++W HHS
Sbjct: 187 IIWGIHHS 194
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 2 LLWFAHHS 9
++W HHS
Sbjct: 187 IIWGIHHS 194
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 2 LLWFAHHS 9
++W HHS
Sbjct: 187 IIWGIHHS 194
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 2 LLWFAHHS 9
++W HHS
Sbjct: 187 IIWGIHHS 194
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LLWFAH 7
LLW AH
Sbjct: 70 LLWHAH 75
>sp|NCAP_CVHN5|NUCLEOPROTEIN coronavirus HKU1 (isolate N5)
Query: 1 GLLWFAHH 8
G+ W A H
Sbjct: 143 GIFWVASH 150
>sp|NCAP_CVHN2|NUCLEOPROTEIN coronavirus HKU1 (isolate N2)
Query: 1 GLLWFAHH 8
G+ W A H
Sbjct: 143 GIFWVASH 150
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin)
Query: 2 LLWFAH 7
LLW AH
Sbjct: 70 LLWHAH 75
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)
Query: 3 LWFAHHSL 10
LW AH+ L
Sbjct: 487 LWSAHNKL 494
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 3 LWFAHHSL 10
LW AH+ L
Sbjct: 487 LWSAHNKL 494
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 3 LWFAHHSL 10
LW AH+ L
Sbjct: 487 LWSAHNKL 494
>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 2 LLWFAHHS 9
L+W A HS
Sbjct: 328 LVWMACHS 335
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GLLWFAHHSL 10
G+L++ HSL
Sbjct: 155 GVLYYLAHSL 164
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GLLWFAHHSL 10
G+L++ HSL
Sbjct: 155 GVLYYLAHSL 164
>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985
Query: 2 LLWFAHHS 9
++W HHS
Sbjct: 187 IVWGIHHS 194
>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985
Query: 2 LLWFAHHS 9
++W HHS
Sbjct: 187 IVWGIHHS 194
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 LLWFAHHS 9
++W HHS
Sbjct: 187 IVWGIHHS 194
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 2 LLWFAHHS 9
++W HHS
Sbjct: 187 IVWGIHHS 194
>sp|HEMA_I83A1|HEMAGGLUTININ A virus (strain A/Chile/1/1983
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 192 VLWGVHH 198
>sp|HEMA_I80AA|HEMAGGLUTININ A virus (strain A/India/6263/1980
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 192 VLWGVHH 198
>sp|HEMA_I79A4|HEMAGGLUTININ A virus (strain A/Kiev/59/1979
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 192 VLWGVHH 198
>sp|HEMA_I77AB|HEMAGGLUTININ A virus (strain A/USSR/90/1977
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 192 VLWGVHH 198
>sp|HEMA_I77AA|HEMAGGLUTININ A virus (strain A/Brazil/11/1978
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 192 VLWGVHH 198
>sp|HEMA_I54A2|HEMAGGLUTININ A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 192 VLWGVHH 198
>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 192 VLWGVHH 198
>sp|HEMA_I51A0|HEMAGGLUTININ A virus (strain A/USA:Albany/12/1951
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 192 VLWGVHH 198
>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 192 VLWGVHH 198
>sp|HEMA_I40A0|HEMAGGLUTININ A virus (strain A/Hickox/1940
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 192 VLWGVHH 198
>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 192 VLWGVHH 198
>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 192 VLWGVHH 198
>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 191 VLWGVHH 197
>sp|UL76_HCMVM|PROTEIN UL76|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 WFAHHSL 10
W A HSL
Sbjct: 116 WHATHSL 122
>sp|UL76_HCMVA|PROTEIN UL76|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 WFAHHSL 10
W A HSL
Sbjct: 116 WHATHSL 122
>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 191 VLWGVHH 197
>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 191 VLWGVHH 197
>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 192 VLWGVHH 198
>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 192 VLWGVHH 198
>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 192 VLWGVHH 198
>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 191 VLWGVHH 197
>sp|HEMA_I96A3|HEMAGGLUTININ A virus (strain A/China:Nanchang/11/1996
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 191 VLWGVHH 197
>sp|HEMA_I96A2|HEMAGGLUTININ A virus (strain A/USA:Memphis/10/1996
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 192 VLWGVHH 198
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 GLLWFAH 7
GLLW+ +
Sbjct: 2214 GLLWYGN 2220
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 190 ILWGIHH 196
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 190 ILWGIHH 196
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 190 ILWGIHH 196
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 190 ILWGIHH 196
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 188 ILWGIHH 194
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 190 ILWGIHH 196
>sp|HEMA_I86A0|HEMAGGLUTININ A virus (strain A/Taiwan/1/1986
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 192 VLWGVHH 198
>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 191 VLWGVHH 197
>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 192 VLWGVHH 198
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GLLWFA 6
GLLW A
Sbjct: 2185 GLLWVA 2190
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GLLWFA 6
GLLW A
Sbjct: 2185 GLLWVA 2190
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 LLWFAH 7
++WF H
Sbjct: 2020 VIWFCH 2025
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 LLWFAH 7
++WF H
Sbjct: 2070 VIWFCH 2075
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 LLWFAH 7
++WF H
Sbjct: 2020 VIWFCH 2025
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 LLWFAH 7
++WF H
Sbjct: 2070 VIWFCH 2075
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GLLWFA 6
GLLW A
Sbjct: 2185 GLLWVA 2190
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GLLWFA 6
GLLW A
Sbjct: 2185 GLLWVA 2190
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GLLWFA 6
GLLW A
Sbjct: 2185 GLLWVA 2190
>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LLWFAHHSL 10
L+W HSL
Sbjct: 236 LIWPEKHSL 244
>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957
Query: 2 LLWFAHHSL 10
++W HH +
Sbjct: 188 IIWGVHHPI 196
>sp|HEMA_I60A0|HEMAGGLUTININ A virus (strain A/Ann
Query: 2 LLWFAHHSL 10
++W HH +
Sbjct: 188 IIWGVHHPI 196
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 190 VLWGIHH 196
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 190 VLWGIHH 196
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 190 VLWGIHH 196
>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 192 VLWGIHH 198
>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 192 VLWGIHH 198
>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 192 VLWGIHH 198
>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 192 VLWGIHH 198
>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 191 VLWGIHH 197
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 190 VLWGIHH 196
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 190 VLWGIHH 196
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 190 VLWGIHH 196
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 186 VLWGIHH 192
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 182 VLWGIHH 188
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 190 VLWGIHH 196
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 179 VLWGIHH 185
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 179 VLWGIHH 185
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 179 VLWGIHH 185
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 179 VLWGIHH 185
>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936
Query: 2 LLWFAHH 8
+LW HH
Sbjct: 192 VLWGIHH 198
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 4 WFAHHS 9
W AH+S
Sbjct: 347 WLAHNS 352
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 4 WFAHHS 9
W AH+S
Sbjct: 347 WLAHNS 352
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 2 LLWFAHHS 9
+ W HHS
Sbjct: 187 ITWGIHHS 194
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 4 WFAHHSL 10
WF H+ +
Sbjct: 628 WFPHYGV 634
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 4 WFAHHS 9
W AH+S
Sbjct: 346 WLAHNS 351
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GLLWFA 6
G+LW A
Sbjct: 2185 GMLWMA 2190
>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957
Query: 2 LLWFAHH 8
++W HH
Sbjct: 188 IIWGVHH 194
>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985
Query: 2 LLWFAHH 8
++W HH
Sbjct: 192 IIWGVHH 198
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GLLWFA 6
G+LW A
Sbjct: 2185 GMLWMA 2190
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GLLWFA 6
G+LW A
Sbjct: 2185 GMLWMA 2190
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GLLWFA 6
G+LW A
Sbjct: 2185 GMLWMA 2190
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GLLWFA 6
G+LW A
Sbjct: 2185 GMLWMA 2190
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 2 LLWFAHH 8
++W HH
Sbjct: 188 IIWGVHH 194
66|Sequence|326|335|AHHSLFLHVR
>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 3 HSLFLHVR 10
HS F+H R
Sbjct: 283 HSYFIHFR 290
>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins
Query: 3 HSLFLHVR 10
HS F+H R
Sbjct: 283 HSYFIHFR 290
>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)
Query: 3 HSLFLHVR 10
HS F+H R
Sbjct: 283 HSYFIHFR 290
>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)
Query: 3 HSLFLHVR 10
HS F+H R
Sbjct: 283 HSYFIHFR 290
>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)
Query: 3 HSLFLHVR 10
HS F+H R
Sbjct: 283 HSYFIHFR 290
>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)
Query: 3 HSLFLHVR 10
HS F+H R
Sbjct: 283 HSYFIHFR 290
>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)
Query: 3 HSLFLHVR 10
HS F+H R
Sbjct: 283 HSYFIHFR 290
>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)
Query: 3 HSLFLHVR 10
HS F+H R
Sbjct: 283 HSYFIHFR 290
>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 3 HSLFLHVR 10
HS F+H R
Sbjct: 283 HSYFIHFR 290
>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 3 HSLFLHVR 10
HS F+H R
Sbjct: 283 HSYFIHFR 290
>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)
Query: 3 HSLFLHVR 10
HS F+H R
Sbjct: 283 HSYFIHFR 290
>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)
Query: 3 HSLFLHVR 10
HS F+H R
Sbjct: 283 HSYFIHFR 290
>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 3 HSLFLHVR 10
HS F+H R
Sbjct: 283 HSYFIHFR 290
>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)
Query: 3 HSLFLHVR 10
HS F+H R
Sbjct: 283 HSYFIHFR 290
>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)
Query: 3 HSLFLHVR 10
HS F+H R
Sbjct: 283 HSYFIHFR 290
>sp|NCAP_DUVV|NUCLEOPROTEIN virus (DUVV)
Query: 3 HSLFLHVR 10
HS F+H R
Sbjct: 283 HSYFIHFR 290
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 HHSLFLHV 9
H SL LH+
Sbjct: 601 HRSLILHL 608
>sp|VPR_HV2D2|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 2 HHSLFLHVR 10
+LFLH R
Sbjct: 70 QRALFLHFR 78
>sp|VPR_HV2EH|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 2 HHSLFLHVR 10
+LFLH R
Sbjct: 70 QRALFLHFR 78
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 3 HSLFLHVR 10
+S+F H+R
Sbjct: 243 NSMFFHLR 250
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 3 HSLFLHVR 10
+S+F H+R
Sbjct: 243 NSMFFHLR 250
>sp|VPR_HV2UC|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 2 HHSLFLHVR 10
+LFLH R
Sbjct: 70 QRALFLHFR 78
>sp|VPR_HV2D1|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 2 HHSLFLHVR 10
+LF+H+R
Sbjct: 70 QRALFVHIR 78
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 HHSLFLHV 9
H SL LH+
Sbjct: 601 HRSLVLHL 608
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 HHSLFLHV 9
H +FLHV
Sbjct: 1058 HGVVFLHV 1065
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 HHSLFLHV 9
H +FLHV
Sbjct: 1040 HGVVFLHV 1047
67|Sequence|331|340|FLHVRKATRA
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 FLHVRKATRA 10
HVR+A R+
Sbjct: 1476 LFHVRRARRS 1485
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 FLHVRKA 7
FLHV+K
Sbjct: 1745 FLHVKKG 1751
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 HVRKAT 8
H+RKAT
Sbjct: 298 HIRKAT 303
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 3 HVRKATR 9
H+RKAT
Sbjct: 289 HIRKATE 295
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 3 HVRKATR 9
H+RKAT
Sbjct: 289 HIRKATE 295
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 4 VRKATR 9
VRKATR
Sbjct: 374 VRKATR 379
>sp|VPX_HV2RO|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 1 FLHVRKA 7
++HVRK
Sbjct: 80 YMHVRKG 86
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 4 VRKATR 9
+RKATR
Sbjct: 374 IRKATR 379
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 4 VRKATR 9
+RKATR
Sbjct: 374 IRKATR 379
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 FLHVRKAT 8
F HV K+T
Sbjct: 790 FRHVNKST 797
68|Sequence|336|345|KATRAMGLLN
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 4 RAMGLLN 10
+A+GLLN
Sbjct: 1731 KALGLLN 1737
69|Sequence|341|350|MGLLNTLSLA
>sp|REX_HTLV2|PROTEIN Rex|Human T-cell leukemia virus 2
Query: 3 LLNTLSLA 10
L NTLSLA
Sbjct: 87 LSNTLSLA 94
70|Sequence|346|355|TLSLAFVGGL
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 4 LAFVGGL 10
LA+VGG+
Sbjct: 199 LAYVGGV 205
>sp|HBSAG_HBVB8|LARGE envelope protein|Hepatitis B virus genotype B1
Query: 3 SLAFVGG 9
SL+F+GG
Sbjct: 212 SLSFLGG 218
>sp|VE6_HPV65|PROTEIN E6|Human papillomavirus 65
Query: 2 LSLAFVGG 9
LSL F GG
Sbjct: 47 LSLVFRGG 54
71|Sequence|351|360|FVGGLPLAYQ
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1743 GLPIRYQ 1749
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1739 GLPIRYQ 1745
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1743 GLPIRYQ 1749
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1735 GLPIRYQ 1741
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1711 GLPIRYQ 1717
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1711 GLPIRYQ 1717
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1711 GLPIRYQ 1717
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1711 GLPIRYQ 1717
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1711 GLPIRYQ 1717
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1711 GLPIRYQ 1717
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1711 GLPIRYQ 1717
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1711 GLPIRYQ 1717
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1711 GLPIRYQ 1717
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1711 GLPIRYQ 1717
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1302 GLPIRYQ 1308
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1712 GLPIRYQ 1718
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1712 GLPIRYQ 1718
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1712 GLPIRYQ 1718
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1712 GLPIRYQ 1718
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1712 GLPIRYQ 1718
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1712 GLPIRYQ 1718
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1712 GLPIRYQ 1718
>sp|NSP1B_ROTGI|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate RVB/Rat/United
Query: 1 FVGGLPLAYQ 10
F GG+ + YQ
Sbjct: 71 FCGGIHIPYQ 80
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1742 GLPVRYQ 1748
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1742 GLPVRYQ 1748
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1742 GLPVRYQ 1748
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 GLPLAYQ 10
GLP+ YQ
Sbjct: 1742 GLPVRYQ 1748
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 FVGGLPLAY 9
++ G+PL Y
Sbjct: 2487 YLAGVPLTY 2495
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 1 FVGGLPLAY 9
F+GG+ L+Y
Sbjct: 476 FLGGVVLSY 484
>sp|NEC1_HHV2H|NUCLEAR egress protein 1|Human herpesvirus 2 (strain HG52)
Query: 1 FVGGLPLAYQ 10
F GGL L YQ
Sbjct: 284 FDGGLMLEYQ 293
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 FVGGLPLA 8
F+G +PLA
Sbjct: 432 FLGSVPLA 439
>sp|NEC1_HHV11|NUCLEAR egress protein 1|Human herpesvirus 1 (strain 17)
Query: 1 FVGGLPLAYQ 10
F GGL L YQ
Sbjct: 285 FDGGLMLEYQ 294
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 GLPLAYQ 10
G+P+ YQ
Sbjct: 1713 GMPIRYQ 1719
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 GLPLAYQ 10
G+P+ YQ
Sbjct: 1712 GMPIRYQ 1718
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 GLPLAYQ 10
G+P+ YQ
Sbjct: 1713 GMPIRYQ 1719
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 4 GLPLAYQ 10
G+P+ YQ
Sbjct: 1741 GMPIRYQ 1747
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FVGGLP 6
FVG LP
Sbjct: 51 FVGALP 56
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FVGGLP 6
FVG LP
Sbjct: 51 FVGALP 56
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 1 FVGGLP 6
FVG LP
Sbjct: 182 FVGALP 187
>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P
Query: 1 FVGGLPLAY 9
F GGL LA+
Sbjct: 371 FRGGLLLAF 379
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 1 FVGGLPL 7
F+GG PL
Sbjct: 89 FLGGRPL 95
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 3 GGLPLAYQ 10
GG +AYQ
Sbjct: 441 GGFLIAYQ 448
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 3 GGLPLAYQ 10
GG +AYQ
Sbjct: 441 GGFLIAYQ 448
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 3 GGLPLAYQ 10
GG +AYQ
Sbjct: 446 GGFLIAYQ 453
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 3 GGLPLAYQ 10
GG +AYQ
Sbjct: 446 GGFLIAYQ 453
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 3 GGLPLAYQ 10
GG +AYQ
Sbjct: 445 GGFLIAYQ 452
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 3 GGLPLAYQ 10
GG +AYQ
Sbjct: 446 GGFLIAYQ 453
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 FVGGLPLA 8
F G +PLA
Sbjct: 432 FFGSVPLA 439
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 FVGGLPLA 8
F G +PLA
Sbjct: 432 FFGSVPLA 439
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 FVGGLPLA 8
F G +PLA
Sbjct: 432 FFGSVPLA 439
>sp|HBSAG_HBVF6|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 1 FVGGLP 6
F+GGLP
Sbjct: 215 FLGGLP 220
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 3 GGLPLAYQ 10
GG +AYQ
Sbjct: 427 GGFLIAYQ 434
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 FVGGLPLA 8
F G +PLA
Sbjct: 432 FFGSVPLA 439
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 FVGGLPLA 8
F G +PLA
Sbjct: 432 FFGSVPLA 439
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 FVGGLPLA 8
F G +PLA
Sbjct: 432 FFGSVPLA 439
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 FVGGLPLA 8
F G +PLA
Sbjct: 432 FFGSVPLA 439
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 FVGGLPLA 8
F G +PLA
Sbjct: 432 FFGSVPLA 439
>sp|HBSAG_HBVF4|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 1 FVGGLP 6
F+GGLP
Sbjct: 215 FLGGLP 220
>sp|HBSAG_HBVF1|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 1 FVGGLP 6
F+GGLP
Sbjct: 215 FLGGLP 220
>sp|NCAP_CVHN5|NUCLEOPROTEIN coronavirus HKU1 (isolate N5)
Query: 4 GLPLAY 9
G+P+AY
Sbjct: 84 GVPIAY 89
>sp|NCAP_CVHN2|NUCLEOPROTEIN coronavirus HKU1 (isolate N2)
Query: 4 GLPLAY 9
G+P+AY
Sbjct: 84 GVPIAY 89
>sp|VU26_HHV7J|PROTEIN U26|Human herpesvirus 7 (strain JI)
Query: 1 FVGGLPLAYQ 10
F GGL L Y+
Sbjct: 42 FSGGLLLTYR 51
72|Sequence|356|365|PLAYQQTSAF
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 PLAYQQTSAF 10
PL QQT F
Sbjct: 1800 PLTTQQTLLF 1809
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 PLAYQQTSAF 10
PL QQT F
Sbjct: 1800 PLTTQQTLLF 1809
73|Sequence|361|370|QTSAFARQPR
>sp|UL06_HCMVM|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 AFARQPR 10
AFAR PR
Sbjct: 28 AFARTPR 34
>sp|UL06_HCMVA|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 AFARQPR 10
AFAR PR
Sbjct: 32 AFARTPR 38
>sp|VE2_HPV61|REGULATORY protein E2|Human papillomavirus type 61
Query: 1 QTSAFARQP 9
QTSA+A +P
Sbjct: 85 QTSAYAHEP 93
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 QTSAFARQ 8
QTSA AR+
Sbjct: 1749 QTSAVARE 1756
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 SAFARQ 8
SAFARQ
Sbjct: 460 SAFARQ 465
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 SAFARQ 8
SAFARQ
Sbjct: 460 SAFARQ 465
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 SAFARQ 8
SAFARQ
Sbjct: 461 SAFARQ 466
>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3
Query: 1 QTSAFARQP 9
QT+ ARQP
Sbjct: 268 QTTERARQP 276
>sp|NEC2_HHV11|NUCLEAR egress protein 2|Human herpesvirus 1 (strain 17)
Query: 3 SAFARQPR 10
S F R PR
Sbjct: 154 SCFVRMPR 161
74|Sequence|366|375|ARQPRDELER
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 QPRDELER 10
+PR +LER
Sbjct: 6691 EPRSDLER 6698
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 QPRDELER 10
+PR +LER
Sbjct: 6711 EPRSDLER 6718
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 QPRDELER 10
+PR +LER
Sbjct: 6741 EPRSDLER 6748
>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)
Query: 1 ARQPRDELER 10
R PR EL++
Sbjct: 311 GRSPRPELQK 320
>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)
Query: 1 ARQPRDELER 10
R PR EL++
Sbjct: 311 GRSPRPELQK 320
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 RQPRDELER 10
R+P DEL R
Sbjct: 928 RKPLDELAR 936
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 2 RQPRDEL 8
++PRD+L
Sbjct: 956 KKPRDDL 962
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 2 RQPRDEL 8
++PRD+L
Sbjct: 958 KKPRDDL 964
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 3 QPRDE 7
QPRDE
Sbjct: 690 QPRDE 694
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 3 QPRDE 7
QPRDE
Sbjct: 691 QPRDE 695
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 2 RQPRDEL 8
++PRD+L
Sbjct: 977 KKPRDDL 983
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 2 RQPRDEL 8
++PRD+L
Sbjct: 957 KKPRDDL 963
75|Sequence|371|380|DELERVRVSC
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DELERVRV 8
DELER+R+
Sbjct: 14 DELERIRL 21
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 DELERVRV 8
DELER+R+
Sbjct: 14 DELERIRL 21
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DELERVRV 8
DELE+VR+
Sbjct: 14 DELEKVRL 21
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DELERVRV 8
DELE+VR+
Sbjct: 14 DELEKVRL 21
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DELERVRV 8
DELE+VR+
Sbjct: 14 DELEKVRL 21
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 DELERVRV 8
DELE+VR+
Sbjct: 14 DELEKVRL 21
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 DELERVRV 8
DELE+VR+
Sbjct: 14 DELEKVRL 21
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 DELERVRV 8
DELE+VR+
Sbjct: 14 DELEKVRL 21
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DELERVRV 8
DELE+VR+
Sbjct: 14 DELEKVRL 21
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DELERVRV 8
DELE+VR+
Sbjct: 14 DELEKVRL 21
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DELERVRV 8
DELE+VR+
Sbjct: 14 DELEKVRL 21
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 DELERVRV 8
DELE+VR+
Sbjct: 14 DELEKVRL 21
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 DELERVRV 8
DELE+VR+
Sbjct: 14 DELEKVRL 21
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 DELERVRV 8
DELE+VR+
Sbjct: 14 DELEKVRL 21
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 DELERVRV 8
DEL +VRV
Sbjct: 521 DELHQVRV 528
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 ELERVRVSC 10
E+E R++C
Sbjct: 2218 EIEPARIAC 2226
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 ELERVRVSC 10
E+E R++C
Sbjct: 2214 EIEPARIAC 2222
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 ELERVRVSC 10
E+E R++C
Sbjct: 2218 EIEPARIAC 2226
>sp|TRX2_EBVB9|TRIPLEX capsid protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 DELERVRV 8
D+L R+RV
Sbjct: 259 DDLSRMRV 266
>sp|REV_HV1ZH|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LERVRVSC 10
+ER+R+ C
Sbjct: 52 IERLRIDC 59
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 DELERVRVSC 10
DEL + V+C
Sbjct: 318 DELLKAAVTC 327
>sp|REV_HV193|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LERVRVSC 10
LER+ ++C
Sbjct: 78 LERLHINC 85
>sp|REV_HV1VI|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 LERVRVSC 10
LER+ ++C
Sbjct: 78 LERLHINC 85
76|Sequence|376|385|VRVSCTIIFL
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RVSCTII 8
+VSCTI+
Sbjct: 1013 KVSCTIL 1019
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RVSCTII 8
+VSCTI+
Sbjct: 1293 KVSCTIL 1299
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RVSCTII 8
+VSCTI+
Sbjct: 1293 KVSCTIL 1299
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RVSCTII 8
+VSCTI+
Sbjct: 1293 KVSCTIL 1299
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 RVSCTII 8
+VSCTI+
Sbjct: 1293 KVSCTIL 1299
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RVSCTII 8
+VSCTI+
Sbjct: 1293 KVSCTIL 1299
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RVSCTII 8
+VSCTI+
Sbjct: 1293 KVSCTIL 1299
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 SCTIIFL 10
SC +IFL
Sbjct: 14 SCALIFL 20
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 4 SCTIIFL 10
SC +IFL
Sbjct: 14 SCALIFL 20
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 VRVSCTIIFL 10
+R+S IFL
Sbjct: 430 IRISANCIFL 439
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VRVSCTIIFL 10
+R+S IFL
Sbjct: 445 IRISANCIFL 454
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 4 SCTIIF 9
+CT+IF
Sbjct: 262 ACTLIF 267
77|Sequence|381|390|TIIFLASIFQ
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 1 TIIFLASIF 9
T+I L SIF
Sbjct: 30 TLILLVSIF 38
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 2 IIFLASIFQ 10
I+F+AS+ Q
Sbjct: 409 ILFVASVAQ 417
78|Sequence|386|395|ASIFQLAMWT
>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41
Query: 3 IFQLAMW 9
IFQ+A+W
Sbjct: 19 IFQMAVW 25
>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)
Query: 2 SIFQLAMWT 10
SIF +A W+
Sbjct: 170 SIFHMAAWS 178
>sp|NRAM_INBVI|NEURAMINIDASE B virus (strain B/Victoria/3/1985)
Query: 2 SIFQLAMWT 10
SIF +A W+
Sbjct: 169 SIFHMAAWS 177
>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)
Query: 2 SIFQLAMWT 10
SIF +A W+
Sbjct: 169 SIFHMAAWS 177
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 2 SIFQLAMWT 10
SIF +A W+
Sbjct: 170 SIFHMAAWS 178
>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)
Query: 2 SIFQLAMWT 10
SIF +A W+
Sbjct: 169 SIFHMAAWS 177
>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)
Query: 2 SIFQLAMWT 10
SIF +A W+
Sbjct: 170 SIFHMAAWS 178
>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong
Query: 2 SIFQLAMWT 10
SIF +A W+
Sbjct: 170 SIFHMAAWS 178
>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)
Query: 2 SIFQLAMWT 10
SIF +A W+
Sbjct: 170 SIFHMAAWS 178
>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)
Query: 2 SIFQLAMWT 10
SIF +A W+
Sbjct: 169 SIFHMAAWS 177
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 2 SIFQLAMWT 10
SIF +A W+
Sbjct: 170 SIFHMAAWS 178
>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)
Query: 2 SIFQLAMWT 10
SIF +A W+
Sbjct: 169 SIFHMAAWS 177
>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)
Query: 2 SIFQLAMWT 10
SIF +A W+
Sbjct: 170 SIFHMAAWS 178
>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human
Query: 2 SIFQLAMW 9
++FQ+A+W
Sbjct: 3 NVFQMAVW 10
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 4 FQLAMW 9
Q+AMW
Sbjct: 15 LQMAMW 20
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 1 ASIFQLA 7
AS+FQ+A
Sbjct: 763 ASLFQIA 769
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 1 ASIFQLA 7
AS+FQ+A
Sbjct: 763 ASLFQIA 769
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 1 ASIFQLA 7
AS+FQ+A
Sbjct: 763 ASLFQIA 769
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 1 ASIFQLA 7
AS+FQ+A
Sbjct: 763 ASLFQIA 769
79|Sequence|391|400|LAMWTTALLH
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 AMWTTAL 8
++WTT+L
Sbjct: 455 SVWTTSL 461
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 AMWTTAL 8
++WTT+L
Sbjct: 455 SVWTTSL 461
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 3 MWTTAL 8
+WTTA
Sbjct: 959 LWTTAF 964
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 MWTTAL 8
+WTTA
Sbjct: 959 LWTTAF 964
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 5 TTALLH 10
TTAL+H
Sbjct: 59 TTALIH 64
>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 TTALLH 10
TTAL+H
Sbjct: 59 TTALIH 64
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 4 WTTALLH 10
W T L+H
Sbjct: 1283 WLTKLIH 1289
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 4 WTTALLH 10
W T L+H
Sbjct: 1283 WLTKLIH 1289
>sp|UL38_HHV6U|APOPTOSIS inhibitor U19|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 WTTAL 8
WTTA+
Sbjct: 128 WTTAM 132
>sp|UL38_HHV6H|APOPTOSIS inhibitor U19|Human herpesvirus 6B (HHV-6 variant
Query: 4 WTTAL 8
WTTA+
Sbjct: 128 WTTAM 132
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 LAMWTTALLH 10
+AMW ++L+
Sbjct: 841 MAMWRSSLVE 850
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 2 AMWTTALLH 10
A W LLH
Sbjct: 544 AKWYPTLLH 552
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LAMWTTA 7
L +WTTA
Sbjct: 11 LPLWTTA 17
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 4 WTTALLH 10
W T L+H
Sbjct: 1283 WLTQLVH 1289
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LAMWTTA 7
L +WTTA
Sbjct: 11 LPLWTTA 17
>sp|U150A_HCMVM|UNCHARACTERIZED protein UL150A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 AMWTTALL 9
A+W ALL
Sbjct: 152 ALWDVALL 159
80|Sequence|396|405|TALLHQAETL
>sp|VL2_HPV53|MINOR capsid protein L2|Human papillomavirus type 53
Query: 2 ALLHQAETL 10
A LH+ ETL
Sbjct: 240 AFLHKPETL 248
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 ALLHQA 7
ALLHQA
Sbjct: 607 ALLHQA 612
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 ALLHQA 7
ALLHQA
Sbjct: 607 ALLHQA 612
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 ALLHQA 7
ALLHQA
Sbjct: 607 ALLHQA 612
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 ALLHQA 7
ALLHQA
Sbjct: 607 ALLHQA 612
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 ALLHQA 7
ALLHQA
Sbjct: 607 ALLHQA 612
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 5 HQAETL 10
HQ ETL
Sbjct: 292 HQTETL 297
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TALLHQA 7
TAL+HQ+
Sbjct: 472 TALVHQS 478
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TALLHQA 7
TAL+HQ+
Sbjct: 472 TALVHQS 478
81|Sequence|401|410|QAETLQPSVW
>sp|PG108_MONPV|ENVELOPE protein OPG108|Monkeypox virus (MPXV)
Query: 3 ETLQPSVW 10
ET++P+ W
Sbjct: 250 ETMKPNFW 257
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 QAETLQPSV 9
QAET+ P+V
Sbjct: 1742 QAETITPTV 1750
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 QAETLQPSV 9
QAET+ P+V
Sbjct: 1742 QAETITPAV 1750
>sp|TRX2_HHV8P|TRIPLEX capsid protein 2|Human herpesvirus 8 type P
Query: 2 AETLQPSVW 10
AETL S W
Sbjct: 293 AETLAASCW 301
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 QAETLQPSV 9
QAE L+P+V
Sbjct: 1740 QAEDLKPAV 1748
>sp|UL41_HCMVA|UNCHARACTERIZED protein UL41|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 TLQPSVW 10
TL+P +W
Sbjct: 12 TLRPGLW 18
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 QAETLQPSV 9
QAE L+P+V
Sbjct: 1743 QAEELKPAV 1751
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 QAETLQPSV 9
QAE L+P+V
Sbjct: 1746 QAEELKPAV 1754
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 QAETLQPSV 9
QAE L+P+V
Sbjct: 1747 QAEELKPAV 1755
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 QAETLQPSV 9
QAE L+P+V
Sbjct: 1746 QAEELKPAV 1754
>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 QAETLQPSV 9
Q ET+ PS+
Sbjct: 289 QTETVVPSI 297
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 QAETLQPS 8
+AETL+P+
Sbjct: 1743 KAETLKPA 1750
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 QAETLQPS 8
+AETL+P+
Sbjct: 1743 KAETLKPA 1750
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 QAETLQPSV 9
QA+ +QP+V
Sbjct: 1746 QAQDIQPAV 1754
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 QAETLQPSV 9
QA+ +QP+V
Sbjct: 1746 QAQDIQPAV 1754
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 QAETLQPSV 9
QAE + P+V
Sbjct: 1742 QAEVIAPTV 1750
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 QAETLQPSV 9
QAE + P+V
Sbjct: 1742 QAEVIAPAV 1750
82|Sequence|406|415|QPSVWFGGRE
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 2 PSVWFGG 8
PSVWF G
Sbjct: 840 PSVWFNG 846
>sp|M1_INBYA|MATRIX protein 1|Influenza B virus (strain B/Yamagata/1/1973)
Query: 5 WFGGRE 10
WFGG+E
Sbjct: 31 WFGGKE 36
>sp|M1_INBSI|MATRIX protein 1|Influenza B virus (strain B/Singapore/222/1979)
Query: 5 WFGGRE 10
WFGG+E
Sbjct: 31 WFGGKE 36
>sp|M1_INBMP|MATRIX protein 1|Influenza B virus (strain B/Memphis/12/1997)
Query: 5 WFGGRE 10
WFGG+E
Sbjct: 31 WFGGKE 36
>sp|M1_INBLE|MATRIX protein 1|Influenza B virus (strain B/Lee/1940)
Query: 5 WFGGRE 10
WFGG+E
Sbjct: 31 WFGGKE 36
>sp|M1_INBAD|MATRIX protein 1|Influenza B virus (strain B/Ann
Query: 5 WFGGRE 10
WFGG+E
Sbjct: 31 WFGGKE 36
>sp|M1_INBAC|MATRIX protein 1|Influenza B virus (strain B/Ann
Query: 5 WFGGRE 10
WFGG+E
Sbjct: 31 WFGGKE 36
>sp|NSS_SFTSV|NON-STRUCTURAL protein NS-S|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 1 QPSVWF 6
+PSVWF
Sbjct: 105 KPSVWF 110
>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P
Query: 2 PSVWFGG 8
P VW GG
Sbjct: 163 PFVWLGG 169
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 QPSVWFG 7
QPS W G
Sbjct: 255 QPSTWLG 261
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 PSVWFGGRE 10
P+VW+ G +
Sbjct: 822 PAVWYNGHK 830
>sp|KRB2_VACCC|PSEUDOKINASE OPG198|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 WFGGR 9
WFGG+
Sbjct: 212 WFGGK 216
>sp|KRB2_VACCA|PSEUDOKINASE OPG198|Vaccinia virus (strain Ankara) (VACV)
Query: 5 WFGGR 9
WFGG+
Sbjct: 212 WFGGK 216
>sp|KRB2_MONPV|PSEUDOKINASE OPG198|Monkeypox virus (MPXV)
Query: 5 WFGGR 9
WFGG+
Sbjct: 211 WFGGK 215
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 2 PSVWFGGRE 10
P+VW+ G +
Sbjct: 822 PAVWYNGHK 830
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 2 PSVWFGGRE 10
P+VW+ G +
Sbjct: 822 PAVWYNGHK 830
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 1 QPSVWF 6
+PS WF
Sbjct: 722 KPSAWF 727
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 2 PSVWFGGRE 10
P+VW+ G +
Sbjct: 822 PAVWYNGHK 830
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 3 SVWFGGR 9
S WFG R
Sbjct: 350 SSWFGNR 356
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 3 SVWFGGR 9
S WFG R
Sbjct: 350 SSWFGNR 356
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 3 SVWFGGR 9
S WFG R
Sbjct: 350 SSWFGNR 356
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 3 SVWFGGRE 10
SVW GRE
Sbjct: 317 SVWGKGRE 324
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 3 SVWFGGR 9
S WFG R
Sbjct: 350 SSWFGNR 356
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 QPSVWF 6
+P+VWF
Sbjct: 1829 RPTVWF 1834
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 3 SVWFGGRE 10
S+W GRE
Sbjct: 330 SIWGKGRE 337
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 3 SVWFGGRE 10
S+W GRE
Sbjct: 330 SIWGKGRE 337
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 3 SVWFGGRE 10
S+W GRE
Sbjct: 317 SIWGKGRE 324
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 3 SVWFGGRE 10
S+W GRE
Sbjct: 323 SIWGKGRE 330
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 3 SVWFGGRE 10
S+W GRE
Sbjct: 323 SIWGKGRE 330
>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30
Query: 4 VWFGGRE 10
VWF G++
Sbjct: 119 VWFDGKK 125
>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 1 QPSVWFGGRE 10
QP FGG E
Sbjct: 77 QPRGAFGGSE 86
>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 QPSVWFGGRE 10
QP FGG E
Sbjct: 77 QPRGAFGGSE 86
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 SVWFGG 8
SVW GG
Sbjct: 517 SVWRGG 522
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 SVWFGG 8
SVW GG
Sbjct: 517 SVWRGG 522
>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 QPSVWFGGRE 10
QP FGG E
Sbjct: 77 QPRGAFGGSE 86
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 4 VWFGGR 9
+W GGR
Sbjct: 1736 LWIGGR 1741
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 PSVWFG 7
PSVW G
Sbjct: 2547 PSVWEG 2552
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 4 VWFGGR 9
+W GGR
Sbjct: 1733 LWIGGR 1738
>sp|GP350_EBVB9|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QPSVWFGGRE 10
QP FGG E
Sbjct: 77 QPRGAFGGSE 86
>sp|VE2_HPV66|REGULATORY protein E2|Human papillomavirus 66
Query: 4 VWFGGRE 10
VWF G +
Sbjct: 119 VWFDGNK 125
>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)
Query: 2 PSVWFG 7
PSVW G
Sbjct: 10 PSVWGG 15
83|Sequence|411|420|FGGREHVLMF
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 FGGREHVL 8
FGG H+L
Sbjct: 463 FGGLRHIL 470
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 FGGREHVL 8
FGG H+L
Sbjct: 463 FGGLRHIL 470
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 GGREHVL 8
GGR+H L
Sbjct: 508 GGRQHYL 514
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 5 EHVLMF 10
EHVL+F
Sbjct: 407 EHVLLF 412
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 GGREHVLMF 10
GGR+ V+M
Sbjct: 869 GGRDAVIML 877
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 5 EHVLMF 10
EHVL+F
Sbjct: 407 EHVLLF 412
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 5 EHVLMF 10
EHVL+F
Sbjct: 407 EHVLLF 412
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 5 EHVLMF 10
EHVL+F
Sbjct: 407 EHVLLF 412
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 5 EHVLMF 10
EH+L+F
Sbjct: 388 EHILLF 393
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 5 EHVLMF 10
EH+L+F
Sbjct: 388 EHILLF 393
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 5 EHVLMF 10
EH+L+F
Sbjct: 408 EHILLF 413
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 5 EHVLMF 10
EH+L+F
Sbjct: 408 EHILLF 413
84|Sequence|416|425|HVLMFAKLAL
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 HVLMFAKLAL 10
H+L FA+L L
Sbjct: 2036 HLLNFARLDL 2045
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 HVLMFAKLAL 10
H+L FA+L L
Sbjct: 2036 HLLNFARLDL 2045
>sp|E1B55_ADE12|E1B 55 kDa protein|Human adenovirus A serotype 12
Query: 5 FAKLAL 10
FAKLAL
Sbjct: 160 FAKLAL 165
>sp|U22_HHV6Z|PROTEIN U22|Human herpesvirus 6B (strain Z29)
Query: 1 HVLMFAKLA 9
H L+F K+A
Sbjct: 43 HWLIFVKMA 51
>sp|U22_HHV6U|GLYCOPROTEIN U22|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 HVLMFAKLA 9
H L+F K+A
Sbjct: 43 HWLIFVKMA 51
85|Sequence|421|430|AKLALYPCAS
>sp|CEP1_HHV6U|CYTOPLASMIC envelopment protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 AKLALYPCAS 10
AKL L+P S
Sbjct: 140 AKLVLFPALS 149
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 2 KLALYPC 8
KLAL PC
Sbjct: 787 KLALAPC 793
>sp|US09_HCMVM|MEMBRANE glycoprotein US9|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LALYPCAS 10
L +YPC++
Sbjct: 149 LTVYPCSA 156
>sp|US09_HCMVA|UNIQUE short US9 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LALYPCAS 10
L +YPC++
Sbjct: 149 LTVYPCSA 156
86|Sequence|426|435|YPCASLLAFA
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 1 YPCASLLAF 9
Y C SLL F
Sbjct: 479 YFCMSLLQF 487
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 1 YPCASLLAF 9
Y C SLL F
Sbjct: 479 YFCMSLLQF 487
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 1 YPCASLLAF 9
Y C SLL F
Sbjct: 496 YFCMSLLKF 504
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 1 YPCASLLAF 9
Y C SLL F
Sbjct: 479 YFCMSLLQF 487
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 1 YPCASLLAF 9
Y C SLL F
Sbjct: 495 YFCMSLLKF 503
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 1 YPCASLLAF 9
Y C SLL F
Sbjct: 517 YFCMSLLRF 525
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 1 YPCASLLAF 9
Y C SLL F
Sbjct: 498 YFCMSLLRF 506
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 ASLLAFA 10
ASLLAF+
Sbjct: 560 ASLLAFS 566
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 ASLLAFA 10
ASLLAF+
Sbjct: 560 ASLLAFS 566
>sp|VU3_HHV7J|PROTEIN U3|Human herpesvirus 7 (strain JI)
Query: 3 CASLLAF 9
CA +LAF
Sbjct: 218 CAEILAF 224
>sp|VE6_HPV60|PROTEIN E6|Human papillomavirus type 60
Query: 1 YPCASLLAFA 10
+ C +LL+FA
Sbjct: 104 FDCLTLLSFA 113
>sp|US10_VZVD|VIRION protein US10 homolog|Varicella-zoster virus (strain Dumas)
Query: 2 PCASLLAFA 10
PCASL A
Sbjct: 62 PCASLWGRA 70
87|Sequence|431|440|LLAFASTCLL
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 LLAFASTC 8
+LAF S C
Sbjct: 549 MLAFVSAC 556
>sp|EAD_EBVG|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 2 LAFASTCLL 10
LA+ TC+L
Sbjct: 89 LAYGRTCVL 97
>sp|EAD_EBVB9|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 2 LAFASTCLL 10
LA+ TC+L
Sbjct: 89 LAYGRTCVL 97
>sp|EAD_EBVA8|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 2 LAFASTCLL 10
LA+ TC+L
Sbjct: 89 LAYGRTCVL 97
>sp|LEAD_ADE05|I-LEADER protein|Human adenovirus C serotype 5
Query: 1 LLAFASTC 8
+LAF TC
Sbjct: 34 VLAFVKTC 41
>sp|LEAD_ADE02|I-LEADER protein|Human adenovirus C serotype 2
Query: 1 LLAFASTC 8
+LAF TC
Sbjct: 34 VLAFVKTC 41
>sp|BET_FOAMV|PROTEIN Bet|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 LLAFASTCL 9
+L+F TCL
Sbjct: 101 ILSFDVTCL 109
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 LLAFASTC 8
LL+F S C
Sbjct: 538 LLSFISAC 545
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 LLAFASTC 8
LL+F S C
Sbjct: 538 LLSFISAC 545
88|Sequence|436|445|STCLLSRFSV
>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)
Query: 1 STCLLSRF 8
+ C LSRF
Sbjct: 15 AKCFLSRF 22
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 TCLLSRF 8
TCLLS F
Sbjct: 1217 TCLLSGF 1223
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 CLLSRFSV 10
CLL +F+V
Sbjct: 1137 CLLEQFNV 1144
89|Sequence|441|450|SRFSVGIFHL
>sp|US34_HCMVA|PROTEIN US34|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SRFSVGIFH 9
SRF+VG FH
Sbjct: 138 SRFNVGDFH 146
>sp|US34_HCMVM|PROTEIN US34|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SRFSVGIFH 9
SRF+VG FH
Sbjct: 138 SRFNVGDFH 146
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 RFSVGIF 8
RFS+G+F
Sbjct: 31 RFSIGLF 37
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 RFSVGIF 8
RFS G+F
Sbjct: 31 RFSTGLF 37
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 RFSVGIF 8
RFS G+F
Sbjct: 31 RFSTGLF 37
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 RFSVGIF 8
RFS G+F
Sbjct: 31 RFSTGLF 37
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 RFSVGIF 8
RFS G+F
Sbjct: 31 RFSTGLF 37
>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus
Query: 1 SRFSVGIFH 9
S SVGI H
Sbjct: 21 SECSVGILH 29
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 2 RFSVGIF 8
RF VG++
Sbjct: 895 RFKVGVY 901
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 2 RFSVGIF 8
RF VG++
Sbjct: 895 RFKVGVY 901
90|Sequence|446|455|GIFHLMQIAV
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 GIFHLMQIAV 10
G F+LMQ+ V
Sbjct: 819 GFFNLMQLKV 828
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 GIFHLMQIAV 10
G F+LMQ+ V
Sbjct: 818 GFFNLMQLKV 827
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 GIFHLMQIAV 10
G F+LMQ+ V
Sbjct: 819 GFFNLMQLKV 828
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 GIFHLMQIAV 10
G F+LMQ+ V
Sbjct: 821 GFFNLMQLQV 830
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 GIFHLMQIAV 10
G F++MQ+ V
Sbjct: 825 GFFNMMQLKV 834
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 GIFHLMQIAV 10
G F++MQ+ V
Sbjct: 825 GFFNMMQLKV 834
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 GIFHLMQIAV 10
G F++MQ+ V
Sbjct: 822 GFFNMMQLKV 831
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 GIFHLMQIAV 10
G F++MQ+ V
Sbjct: 818 GFFNMMQLKV 827
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 GIFHLMQIAV 10
G F++MQ+ V
Sbjct: 820 GFFNMMQMKV 829
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 GIFHLMQIAV 10
G F++MQ+ V
Sbjct: 820 GFFNMMQMKV 829
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 GIFHLMQIAV 10
G F++MQ+ V
Sbjct: 820 GFFNMMQMKV 829
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 GIFHLMQIAV 10
G F++MQ+ V
Sbjct: 820 GFFNMMQMKV 829
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 GIFHLMQIAV 10
G F++MQ+ V
Sbjct: 820 GFFNMMQMKV 829
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 GIFHLMQIAV 10
+F+L+Q A+
Sbjct: 625 AVFYLLQAAI 634
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 GIFHLMQIAV 10
+F+L+Q A+
Sbjct: 625 AVFYLLQAAI 634
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1546 GVFHTM 1551
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1546 GVFHTM 1551
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1542 GVFHTM 1547
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1530 GVFHTM 1535
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1530 GVFHTM 1535
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1530 GVFHTM 1535
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1530 GVFHTM 1535
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1530 GVFHTM 1535
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1530 GVFHTM 1535
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1530 GVFHTM 1535
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1530 GVFHTM 1535
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1530 GVFHTM 1535
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1524 GVFHTM 1529
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1542 GVFHTM 1547
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1543 GVFHTM 1548
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1541 GVFHTM 1546
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1541 GVFHTM 1546
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1518 GVFHTM 1523
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1518 GVFHTM 1523
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1518 GVFHTM 1523
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1518 GVFHTM 1523
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1518 GVFHTM 1523
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1517 GVFHTM 1522
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1517 GVFHTM 1522
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1517 GVFHTM 1522
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1517 GVFHTM 1522
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1517 GVFHTM 1522
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1519 GVFHTM 1524
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1518 GVFHTM 1523
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1519 GVFHTM 1524
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1547 GVFHTM 1552
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 GIFHLM 6
G+FH M
Sbjct: 1514 GVFHTM 1519
91|Sequence|451|460|MQIAVPCAFL
>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV
Query: 5 VPCAFL 10
+PCAFL
Sbjct: 320 LPCAFL 325
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 3 IAVPC 7
IAVPC
Sbjct: 599 IAVPC 603
>sp|VE7_HPV15|PROTEIN E7|Human papillomavirus 15
Query: 2 QIAVPCAF 9
+I VPC F
Sbjct: 45 KIVVPCCF 52
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 4 AVPCA 8
A+PCA
Sbjct: 174 AIPCA 178
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 VPCAFL 10
+PCAF+
Sbjct: 576 LPCAFV 581
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 VPCAFL 10
+PCAF+
Sbjct: 576 LPCAFV 581
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 6 PCAFL 10
PC+FL
Sbjct: 1324 PCSFL 1328
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 6 PCAFL 10
PC+FL
Sbjct: 1324 PCSFL 1328
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 6 PCAFL 10
PC+FL
Sbjct: 1324 PCSFL 1328
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 VPCAFL 10
+PCAF+
Sbjct: 576 LPCAFV 581
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 1 MQIAVPCA 8
MQ+A+ CA
Sbjct: 7 MQLALICA 14
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 IAVPC 7
+AVPC
Sbjct: 90 VAVPC 94
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 3 IAVPC 7
+AVPC
Sbjct: 90 VAVPC 94
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 IAVPC 7
+AVPC
Sbjct: 95 VAVPC 99
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 IAVPC 7
+AVPC
Sbjct: 95 VAVPC 99
92|Sequence|456|465|PCAFLLLRLL
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 PCAFLLLRLL 10
PC LLR L
Sbjct: 198 PCTVELLRCL 207
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 PCAFLLLRL 9
PC LLL L
Sbjct: 795 PCFLLLLML 803
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 PCAFLL 6
PC FL+
Sbjct: 4196 PCKFLI 4201
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 PCAFLL 6
PC FL+
Sbjct: 4196 PCKFLI 4201
93|Sequence|461|470|LLRLLVGLAL
>sp|MATRX_RABVH|MATRIX protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 LLRLLVGLAL 10
L++++VGLAL
Sbjct: 92 LVKVVVGLAL 101
>sp|MATRX_RABVC|MATRIX protein|Rabies virus (strain CVS-11) (RABV)
Query: 1 LLRLLVGLAL 10
L++++VGLAL
Sbjct: 92 LVKVVVGLAL 101
>sp|MATRX_RABVB|MATRIX protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 LLRLLVGLAL 10
L++++VGLAL
Sbjct: 92 LVKVVVGLAL 101
>sp|MATRX_RABVA|MATRIX protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 LLRLLVGLAL 10
L++++VGLAL
Sbjct: 92 LVKVVVGLAL 101
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 LLRLLVGL 8
L RLL+GL
Sbjct: 761 LTRLLIGL 768
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 LLRLLVGLAL 10
L R+L+G+AL
Sbjct: 736 LPRILLGVAL 745
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 LLRLLVGLAL 10
L R+L+G+AL
Sbjct: 736 LPRILLGVAL 745
>sp|VP24_MABVM|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 LRLLVGLAL 10
LR+L+G+AL
Sbjct: 94 LRILLGVAL 102
>sp|VP24_MABVO|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 LRLLVGLAL 10
LR+L+G+AL
Sbjct: 94 LRILLGVAL 102
>sp|VP24_MABVP|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 LRLLVGLAL 10
LR+L+G+AL
Sbjct: 94 LRILLGVAL 102
>sp|VP24_MABVR|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 LRLLVGLAL 10
LR+L+G+AL
Sbjct: 94 LRILLGVAL 102
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 LLRLLVGL 8
++R+L+GL
Sbjct: 733 MVRILIGL 740
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 LLRLLVGL 8
++R+L+GL
Sbjct: 733 MVRILIGL 740
>sp|F13_MCV2|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 2
Query: 2 LRLLVGL 8
LRLLVGL
Sbjct: 267 LRLLVGL 273
>sp|US08_HCMVM|MEMBRANE glycoprotein US8|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LLRLLVGL 8
LRLLVGL
Sbjct: 4 WLRLLVGL 11
>sp|VP24_MABVA|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 LRLLVGLAL 10
LR+L+G+AL
Sbjct: 94 LRILLGVAL 102
>sp|US08_HCMVA|UNIQUE short US8 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 LLRLLVGL 8
LRLLVGL
Sbjct: 4 WLRLLVGL 11
94|Sequence|466|475|VGLALATLRV
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 2 GLALATLR 9
G ALATLR
Sbjct: 110 GTALATLR 117
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 2 GLALATLR 9
G ALATLR
Sbjct: 110 GTALATLR 117
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 VGLALATL 8
+GL LATL
Sbjct: 1235 IGLVLATL 1242
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VGLALAT 7
VGLA+AT
Sbjct: 1231 VGLAMAT 1237
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VGLALAT 7
VGLA+AT
Sbjct: 1231 VGLAMAT 1237
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VGLALAT 7
VGLA+AT
Sbjct: 1231 VGLAMAT 1237
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 VGLALATL 8
+GL LAT+
Sbjct: 1235 IGLVLATI 1242
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 VGLALATL 8
+GL LAT+
Sbjct: 1236 IGLVLATI 1243
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 VGLALATL 8
+GL LAT+
Sbjct: 1235 IGLVLATI 1242
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 VGLALATL 8
+GL LAT+
Sbjct: 1236 IGLVLATI 1243
95|Sequence|471|480|ATLRVLRGLA
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 2 TLRVLRGL 9
T R+LRGL
Sbjct: 34 TERILRGL 41
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 2 TLRVLR 7
TLRVLR
Sbjct: 624 TLRVLR 629
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 2 TLRVLR 7
TLRVLR
Sbjct: 624 TLRVLR 629
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 3 LRVLRG 8
LRVLRG
Sbjct: 1172 LRVLRG 1177
96|Sequence|476|485|LRGLARPEHP
>sp|PB1F2_I97A1|PROTEIN PB1-F2|Influenza A virus (strain A/Hong
Query: 6 RPEHP 10
RPEHP
Sbjct: 29 RPEHP 33
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 5 ARPEHP 10
A PEHP
Sbjct: 1203 AEPEHP 1208
>sp|PG070_VACCC|PROTEIN OPG070|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 RGLARP 7
RGL+RP
Sbjct: 28 RGLSRP 33
>sp|PG070_MONPV|PROTEIN OPG070|Monkeypox virus (MPXV)
Query: 2 RGLARP 7
RGL+RP
Sbjct: 28 RGLSRP 33
>sp|PB1F2_I01A3|PROTEIN PB1-F2|Influenza A virus (strain A/Chicken/Hong
Query: 6 RPEHP 10
RPEHP
Sbjct: 29 RPEHP 33
>sp|TRX2_EBVB9|TRIPLEX capsid protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LRGLARPEH 9
+RGL R EH
Sbjct: 224 VRGLIRHEH 232
>sp|PG070_VARV|PROTEIN OPG070|Variola virus
Query: 2 RGLARP 7
RGL RP
Sbjct: 28 RGLGRP 33
>sp|PG070_VAR67|PROTEIN OPG070|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 RGLARP 7
RGL RP
Sbjct: 28 RGLGRP 33
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 LRGLAR 6
LRGLAR
Sbjct: 1419 LRGLAR 1424
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 LRGLAR 6
LRGLAR
Sbjct: 1419 LRGLAR 1424
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 LRGLAR 6
LRGLAR
Sbjct: 1419 LRGLAR 1424
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 LRGLAR 6
LRGLAR
Sbjct: 1419 LRGLAR 1424
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 LRGLAR 6
LRGLAR
Sbjct: 1419 LRGLAR 1424
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 LRGLAR 6
LRGLAR
Sbjct: 1420 LRGLAR 1425
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 LRGLAR 6
LRGLAR
Sbjct: 1419 LRGLAR 1424
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 LRGLAR 6
LRGLAR
Sbjct: 1419 LRGLAR 1424
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 LRGLAR 6
LRGLAR
Sbjct: 1419 LRGLAR 1424
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 LRGLAR 6
LRGLAR
Sbjct: 1419 LRGLAR 1424
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 LRGLAR 6
LRGLAR
Sbjct: 1420 LRGLAR 1425
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 LRGLAR 6
LRGLAR
Sbjct: 1419 LRGLAR 1424
>sp|NEF_HV1M2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 LRGLARPEHP 10
LR +AR HP
Sbjct: 186 LRHIARERHP 195
>sp|NEF_HV1VI|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 LRGLARPEHP 10
LR +AR HP
Sbjct: 191 LRHIARERHP 200
>sp|NEF_HV193|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 LRGLARPEHP 10
LR +AR HP
Sbjct: 194 LRHIARERHP 203
>sp|REV_HV1MA|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 4 LARPEHP 10
L RPE P
Sbjct: 65 LGRPEEP 71
>sp|E1A_ADE41|EARLY E1A protein|Human adenovirus F serotype 41
Query: 1 LRGLARPEHP 10
+GL EHP
Sbjct: 16 FQGLLEAEHP 25
97|Sequence|481|490|RPEHPPPAPT
>sp|PHOSP_ISFV|PHOSPHOPROTEIN virus (ISFV)
Query: 2 PEHPPPAPT 10
PEH PP+PT
Sbjct: 174 PEHIPPSPT 182
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 PEHPPPAPT 10
P HP P+ T
Sbjct: 1792 PHHPSPSQT 1800
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 1 RPEHPPP 7
RP+ PPP
Sbjct: 684 RPKTPPP 690
>sp|E1BS_ADE12|E1B protein, small T-antigen|Human adenovirus A serotype 12
Query: 1 RPEHPPPAPT 10
RP PP PT
Sbjct: 138 RPLTMPPLPT 147
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 RPEHPPP 7
RP+ PPP
Sbjct: 688 RPKTPPP 694
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 PEHPPPAPT 10
P H P PT
Sbjct: 1584 PRHAKPGPT 1592
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 PEHPPPAPT 10
P H P PT
Sbjct: 1576 PRHAKPGPT 1584
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 PEHPPP 7
PE PPP
Sbjct: 1461 PETPPP 1466
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 PEHPPP 7
PE PPP
Sbjct: 1442 PETPPP 1447
Query: 2 PEHPPPAPT 10
P H P PT
Sbjct: 1577 PRHAKPGPT 1585
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 PEHPPP 7
PE PPP
Sbjct: 1445 PETPPP 1450
Query: 2 PEHPPPAPT 10
P H P PT
Sbjct: 1580 PRHAKPGPT 1588
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 PEHPPP 7
PE PPP
Sbjct: 1451 PETPPP 1456
Query: 2 PEHPPPAPT 10
P H P PT
Sbjct: 1586 PRHAKPGPT 1594
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 PEHPPP 7
PE PPP
Sbjct: 1441 PETPPP 1446
Query: 2 PEHPPPAPT 10
P H P PT
Sbjct: 1576 PRHAKPGPT 1584
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 PEHPPP 7
PE PPP
Sbjct: 1442 PETPPP 1447
Query: 2 PEHPPPAPT 10
P H P PT
Sbjct: 1577 PRHAKPGPT 1585
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 PEHPPP 7
PE PPP
Sbjct: 1440 PETPPP 1445
Query: 2 PEHPPPAPT 10
P H P PT
Sbjct: 1575 PRHAKPGPT 1583
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 HPPPAPT 10
HP APT
Sbjct: 5944 HPTQAPT 5950
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 HPPPAPT 10
HP APT
Sbjct: 5921 HPTQAPT 5927
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 PEHPPP 7
PE PPP
Sbjct: 1453 PETPPP 1458
Query: 2 PEHPPPAPT 10
P H P PT
Sbjct: 1588 PRHAKPGPT 1596
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 PEHPPP 7
PE PPP
Sbjct: 1459 PETPPP 1464
Query: 2 PEHPPPAPT 10
P H P PT
Sbjct: 1594 PRHAKPGPT 1602
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 5 PPPAP 9
PPP P
Sbjct: 1224 PPPKP 1228
Query: 2 PEHP 5
PEHP
Sbjct: 1205 PEHP 1208
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 PEHPPP 7
PE PPP
Sbjct: 1443 PETPPP 1448
Query: 2 PEHPPPAPT 10
P H P PT
Sbjct: 1578 PRHAKPGPT 1586
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 PEHPPP 7
PE PPP
Sbjct: 1443 PETPPP 1448
Query: 2 PEHPPPAPT 10
P H P PT
Sbjct: 1578 PRHAKPGPT 1586
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 PEHPPP 7
PE PPP
Sbjct: 1452 PETPPP 1457
Query: 2 PEHPPPAPT 10
P H P PT
Sbjct: 1587 PRHAKPGPT 1595
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 PEHPPP 7
PE PPP
Sbjct: 1451 PETPPP 1456
Query: 2 PEHPPPAPT 10
P H P PT
Sbjct: 1586 PHHAKPGPT 1594
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 PEHPPP 7
PE PPP
Sbjct: 1454 PETPPP 1459
Query: 2 PEHPPPAPT 10
P H P PT
Sbjct: 1589 PRHAKPGPT 1597
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 3 EHPPPAP 9
+ PPP P
Sbjct: 355 QKPPPLP 361
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 PEHPPPAPT 10
P H P PT
Sbjct: 1578 PRHAKPGPT 1586
>sp|A26_VACCC|PUTATIVE A-type inclusion protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PEHPP 6
PEHPP
Sbjct: 316 PEHPP 320
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 RPEHPPPAPT 10
RPE P P T
Sbjct: 92 RPESPSPDGT 101
>sp|PB1F2_I01A3|PROTEIN PB1-F2|Influenza A virus (strain A/Chicken/Hong
Query: 1 RPEHP 5
RPEHP
Sbjct: 29 RPEHP 33
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 2 PEHPPPAP 9
P H PAP
Sbjct: 305 PRHNFPAP 312
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PEHPPPAP 9
P H PAP
Sbjct: 305 PRHNFPAP 312
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 RPEHPPPAPT 10
RPE P P T
Sbjct: 92 RPESPSPDGT 101
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 1 RPEHPPPAP 9
+P HP PAP
Sbjct: 568 QPTHPLPAP 576
>sp|SCP_VZVD|SMALL capsomere-interacting protein|Varicella-zoster virus (strain Dumas)
Query: 2 PEHPPPAPT 10
P+HPPP T
Sbjct: 151 PQHPPPQTT 159
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 5 PPPAP 9
PPP P
Sbjct: 2864 PPPPP 2868
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PEHPPPAPT 10
PE P P T
Sbjct: 25 PEQPAPPAT 33
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PEHPPPAPT 10
PE P P T
Sbjct: 25 PEQPAPPAT 33
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 5 PPPAP 9
PPP P
Sbjct: 386 PPPLP 390
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PEHPPPAPT 10
PE P P T
Sbjct: 25 PEQPAPPAT 33
>sp|PB1F2_I97A1|PROTEIN PB1-F2|Influenza A virus (strain A/Hong
Query: 1 RPEHP 5
RPEHP
Sbjct: 29 RPEHP 33
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 PPPAPT 10
PPP P+
Sbjct: 15 PPPRPS 20
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 PPPAPT 10
PPP P+
Sbjct: 15 PPPRPS 20
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 2 PEHP 5
PEHP
Sbjct: 578 PEHP 581
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 6 PPAPT 10
PP+PT
Sbjct: 558 PPSPT 562
>sp|GK_HHV1R|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R15)
Query: 2 PEHPP 6
P HPP
Sbjct: 67 PTHPP 71
>sp|GK_HHV1M|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain MP)
Query: 2 PEHPP 6
P HPP
Sbjct: 67 PTHPP 71
>sp|GK_HHV11|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain 17)
Query: 2 PEHPP 6
P HPP
Sbjct: 67 PTHPP 71
>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human
Query: 2 PEHPPPAP 9
PE PP P
Sbjct: 436 PEQAPPEP 443
>sp|GK_HHV1K|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain KOS)
Query: 2 PEHPP 6
P HPP
Sbjct: 67 PTHPP 71
>sp|GK_HHV19|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R19)
Query: 2 PEHPP 6
P HPP
Sbjct: 67 PTHPP 71
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PEHPPPA 8
P HP PA
Sbjct: 20 PVHPTPA 26
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PEHPPPA 8
P HP PA
Sbjct: 20 PVHPTPA 26
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PEHPPPA 8
P HP PA
Sbjct: 20 PVHPTPA 26
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RPEHPPPAP 9
RP HPP +P
Sbjct: 449 RPFHPPGSP 457
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 1 RPEHPPPAP 9
RP HPP +P
Sbjct: 449 RPFHPPGSP 457
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 1 RPEHPPPAP 9
RP HPP +P
Sbjct: 449 RPFHPPGSP 457
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 5 PPPAP 9
PPPAP
Sbjct: 12 PPPAP 16
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 5 PPPAPT 10
PPP PT
Sbjct: 232 PPPLPT 237
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 5 PPPAP 9
PPP P
Sbjct: 74 PPPEP 78
>sp|POLG_ECHO9|GENOME polyprotein|Echo 9 virus (EV-9) (Coxsackievirus
Query: 2 PEHPPPAPT 10
P H P P+
Sbjct: 60 PRHAKPGPS 68
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RPEHPPPAP 9
RP HP P
Sbjct: 456 RPAHPSAPP 464
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 3 EHPPPAP 9
+H PPAP
Sbjct: 430 KHTPPAP 436
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 EHPPPAP 9
+HP P P
Sbjct: 212 QHPSPGP 218
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 6 PPAPT 10
PPAPT
Sbjct: 422 PPAPT 426
>sp|VE4_HPV47|PROTEIN E4|Human papillomavirus 47
Query: 3 EHPPPAP 9
+HPPP P
Sbjct: 138 DHPPPTP 144
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 EHPPPAP 9
+HP P P
Sbjct: 212 QHPSPGP 218
>sp|EAD_EBVG|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 1 RPEHPPPA 8
RPE P PA
Sbjct: 352 RPETPSPA 359
>sp|EAD_EBVB9|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 1 RPEHPPPA 8
RPE P PA
Sbjct: 352 RPETPSPA 359
>sp|EAD_EBVA8|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 1 RPEHPPPA 8
RPE P PA
Sbjct: 352 RPETPSPA 359
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 3 EHPPPAPT 10
E PP PT
Sbjct: 722 EVKPPTPT 729
98|Sequence|486|495|PPAPTGQDDP
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 PPAPTGQDDP 10
PP P G D P
Sbjct: 722 PPVPRGPDRP 731
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAPTGQDDP 10
PAP G D P
Sbjct: 729 PAPRGPDRP 737
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAPTGQDDP 10
PAP G D P
Sbjct: 713 PAPRGPDRP 721
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAPTGQDDP 10
PAP G D P
Sbjct: 731 PAPRGPDRP 739
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAPTGQDDP 10
PAP G D P
Sbjct: 733 PAPRGPDRP 741
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 1 PPAPTGQDD 9
PPAPTG +D
Sbjct: 422 PPAPTGIED 430
>sp|VE2_HPV47|REGULATORY protein E2|Human papillomavirus 47
Query: 1 PPAPTGQDDP 10
P +P GQ DP
Sbjct: 204 PGSPGGQTDP 213
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAPTGQDDP 10
P+P G D P
Sbjct: 698 PSPRGPDRP 706
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAPTGQDDP 10
P+P G D P
Sbjct: 717 PSPRGPDRP 725
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 PAPTGQDD 9
P PTG+ D
Sbjct: 494 PVPTGKGD 501
>sp|VE2_HPV19|REGULATORY protein E2|Human papillomavirus 19
Query: 1 PPAPTGQDDP 10
P +P GQ DP
Sbjct: 204 PDSPGGQRDP 213
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 PAPTGQD 8
PAPTGQ+
Sbjct: 590 PAPTGQN 596
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 PAPTGQD 8
PAPTGQ+
Sbjct: 590 PAPTGQN 596
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAPTGQDDP 10
P P G D P
Sbjct: 713 PTPRGPDRP 721
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAPTGQDDP 10
P P G D P
Sbjct: 722 PTPRGPDRP 730
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAPTGQDDP 10
P P G D P
Sbjct: 722 PTPRGPDRP 730
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAPTGQDDP 10
P P G D P
Sbjct: 727 PTPRGPDRP 735
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAPTGQDDP 10
P P G D P
Sbjct: 721 PVPRGPDRP 729
>sp|VE8E2_HPV47|PROTEIN E8^E2C|Human papillomavirus 47
Query: 1 PPAPTGQDDP 10
P +P GQ DP
Sbjct: 13 PGSPGGQTDP 22
>sp|VE2_HPV12|REGULATORY protein E2|Human papillomavirus 12
Query: 1 PPAPTGQDDP 10
PP GQ DP
Sbjct: 203 PPGSPGQRDP 212
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAPTGQDDP 10
P P G D P
Sbjct: 722 PTPGGPDRP 730
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PPAPTGQDD 9
PP P +DD
Sbjct: 53 PPPPDAEDD 61
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PPAPTGQDD 9
PP P +DD
Sbjct: 53 PPPPDAEDD 61
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAPTGQDDP 10
P P G D P
Sbjct: 722 PIPRGPDRP 730
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAPTGQDDP 10
P P G D P
Sbjct: 722 PIPRGPDRP 730
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAPTGQDDP 10
P P G D P
Sbjct: 709 PNPRGPDRP 717
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAPTGQDDP 10
P P G D P
Sbjct: 734 PNPRGPDRP 742
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAPTGQDDP 10
P P G D P
Sbjct: 717 PNPRGPDRP 725
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAPTGQDDP 10
P P G D P
Sbjct: 711 PNPRGPDRP 719
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 PPAPTGQDD 9
PP P DD
Sbjct: 263 PPEPRCSDD 271
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAPTGQD 8
PAP G D
Sbjct: 719 PAPRGPD 725
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAPTGQD 8
PAP G D
Sbjct: 719 PAPRGPD 725
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 PPAPTGQDD 9
PP P DD
Sbjct: 263 PPEPRYSDD 271
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 1 PPAPTGQDD 9
PPAP+G D
Sbjct: 425 PPAPSGIGD 433
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 PPAPTGQDD 9
PP P DD
Sbjct: 263 PPEPRYSDD 271
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 PPAPTGQDD 9
PP P DD
Sbjct: 263 PPEPRYSDD 271
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 1 PPAPTGQDD 9
PP P DD
Sbjct: 264 PPEPRYSDD 272
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 PPAPTGQDD 9
PP P DD
Sbjct: 263 PPEPRYSDD 271
>sp|FUS_PI2HT|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 1 PPAPTGQDD 9
PP QDD
Sbjct: 394 PPHVVSQDD 402
>sp|FUS_PI2HG|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 1 PPAPTGQDD 9
PP QDD
Sbjct: 394 PPHVVSQDD 402
>sp|FUS_PI2H|FUSION glycoprotein F0|Human parainfluenza 2 virus (HPIV-2)
Query: 1 PPAPTGQDD 9
PP QDD
Sbjct: 394 PPHVVSQDD 402
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PPAPTGQDD 9
P P G DD
Sbjct: 18 PETPNGFDD 26
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas)
Query: 1 PPAPTGQDD 9
P P G DD
Sbjct: 18 PETPNGFDD 26
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 PPAPTGQDD 9
PP P DD
Sbjct: 263 PPEPRYSDD 271
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 PPAPTGQDD 9
PP P DD
Sbjct: 263 PPEPLYSDD 271
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 1 PPAPTGQDD 9
PP P DD
Sbjct: 263 PPEPRYSDD 271
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 PPAPTGQDD 9
PP P DD
Sbjct: 263 PPEPRYSDD 271
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 PPAPTGQDD 9
PP P DD
Sbjct: 263 PPEPLYSDD 271
>sp|MC014_MCV1|PROTEIN MC014|Molluscum contagiosum virus subtype 1
Query: 2 PAPTGQD 8
P P GQD
Sbjct: 25 PVPAGQD 31
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 PPAPTGQDD 9
PP P DD
Sbjct: 264 PPEPRYSDD 272
>sp|RNB_HHV1M|RNA-BINDING protein|Human herpesvirus 1 (strain MP)
Query: 1 PPAPTGQDDP 10
PPAP G DP
Sbjct: 6 PPAPVGPGDP 15
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PPAPTGQDD 9
PP PT +D+
Sbjct: 1231 PPRPTAEDE 1239
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PPAPTGQDD 9
PP PT +D+
Sbjct: 1232 PPRPTAEDE 1240
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PPAPTGQDD 9
PP PT +D+
Sbjct: 1231 PPRPTAEDE 1239
>sp|RNB_HHV11|ACCESSORY factor US11|Human herpesvirus 1 (strain 17)
Query: 1 PPAPTGQDDP 10
PPAP G DP
Sbjct: 6 PPAPVGPGDP 15
>sp|VP2_SVM10|MINOR capsid protein VP2|Sapporo virus (isolate
Query: 1 PPAPTGQDDP 10
PPAP+G +P
Sbjct: 137 PPAPSGFVNP 146
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 PPAPTGQDD 9
PP+P G+ D
Sbjct: 2384 PPSPGGESD 2392
>sp|U61_HHV6U|UNCHARACTERIZED protein U61|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PAPTGQDDP 10
PAP+ DP
Sbjct: 84 PAPSIYQDP 92
>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PPAPTGQ 7
PP P G+
Sbjct: 254 PPTPVGE 260
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PPAPTGQ 7
PP P G+
Sbjct: 254 PPVPVGE 260
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 PAPTGQDD 9
P PT +DD
Sbjct: 718 PIPTTRDD 725
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 1 PPAPTGQD 8
PP+P G D
Sbjct: 628 PPSPVGAD 635
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PPAPTGQ 7
PP P G+
Sbjct: 250 PPVPVGE 256
99|Sequence|491|504|GQDDPQSQLLPAPC
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 GQDDPQSQLLPAP 13
G++ PQ P P
Sbjct: 1842 GENPPQRNFAPLP 1854
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 GQDDPQSQLLPAP 13
G++ PQ P P
Sbjct: 1842 GENPPQRNFAPLP 1854
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 GQDDPQSQLLPAP 13
G++ PQ P P
Sbjct: 1842 GENPPQRNFAPLP 1854
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GQDDPQSQLLP 11
GQ +P+ Q LP
Sbjct: 401 GQWNPKEQFLP 411
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 DDPQSQLLP 11
+DP QL+P
Sbjct: 2949 EDPMIQLIP 2957
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 DDPQSQLLP 11
+DP QL+P
Sbjct: 2861 EDPMIQLIP 2869
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 5 PQSQLLPAPC 14
PQ +L PC
Sbjct: 253 PQETVLSLPC 262
>sp|NEF_HV1OY|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GQDDPQSQLL 10
G DDP+ ++L
Sbjct: 177 GMDDPEKEVL 186
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 GQDDPQSQLLPAP 13
G++ PQ P P
Sbjct: 1841 GENPPQRNYAPLP 1853
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 PQSQLLPAP 13
P Q+LP P
Sbjct: 758 PAEQMLPRP 766
>sp|GL_HCMVM|ENVELOPE glycoprotein L|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GQDDPQSQLL 10
G+D P SQL+
Sbjct: 77 GRDGPLSQLI 86
>sp|GL_HCMV8|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5508) (HHV-5)
Query: 1 GQDDPQSQLL 10
G+D P SQL+
Sbjct: 77 GRDGPLSQLI 86
>sp|GL_HCMV7|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5160) (HHV-5)
Query: 1 GQDDPQSQLL 10
G+D P SQL+
Sbjct: 77 GRDGPLSQLI 86
>sp|GL_HCMV5|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5035) (HHV-5)
Query: 1 GQDDPQSQLL 10
G+D P SQL+
Sbjct: 77 GRDGPLSQLI 86
>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)
Query: 1 GQDDPQSQLL 10
G+D P SQL+
Sbjct: 77 GRDGPLSQLI 86
>sp|GL_HCMVP|ENVELOPE glycoprotein L|Human cytomegalovirus (strain PT) (HHV-5)
Query: 1 GQDDPQSQLL 10
G+D P SQL+
Sbjct: 77 GRDGPLSQLI 86
>sp|GL_HCMV4|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 4654) (HHV-5)
Query: 1 GQDDPQSQLL 10
G+D P SQL+
Sbjct: 77 GRDGPLSQLI 86
>sp|GL_HCMV2|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 1042) (HHV-5)
Query: 1 GQDDPQSQLL 10
G+D P SQL+
Sbjct: 77 GRDGPLSQLI 86
>sp|GL_HCMV3|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 2387) (HHV-5)
Query: 1 GQDDPQSQLL 10
G+D P SQL+
Sbjct: 77 GRDGPLSQLI 86
>sp|NEF_HV1JR|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GQDDPQSQLL 10
G DDP+ ++L
Sbjct: 182 GMDDPEKEVL 191
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 5 PQSQLLP 11
P SQ+LP
Sbjct: 1354 PSSQILP 1360
>sp|NEF_HV1H3|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GQDDPQSQLL 10
G DDP+ ++L
Sbjct: 172 GMDDPEREVL 181
>sp|VL2_HPV52|MINOR capsid protein L2|Human papillomavirus 52
Query: 6 QSQLLPAP 13
+SQLLPAP
Sbjct: 270 RSQLLPAP 277
>sp|NEF_HV1H2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GQDDPQSQLL 10
G DDP+ ++L
Sbjct: 172 GMDDPEREVL 181
>sp|NEF_HV1BR|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GQDDPQSQLL 10
G DDP+ ++L
Sbjct: 172 GMDDPEREVL 181
>sp|NEF_HV1LA|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GQDDPQSQLL 10
G DDP+ ++L
Sbjct: 172 GMDDPEREVL 181
>sp|NEF_HV1B8|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GQDDPQSQLL 10
G DDP+ ++L
Sbjct: 171 GMDDPEREVL 180
>sp|NEF_HV112|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GQDDPQSQLL 10
G DDP+ ++L
Sbjct: 172 GMDDPEREVL 181
>sp|NEF_HV1LW|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GQDDPQSQLL 10
G DDP+ ++L
Sbjct: 172 GMDDPEREVL 181
>sp|NEF_HV1B1|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GQDDPQSQLL 10
G DDP+ ++L
Sbjct: 172 GMDDPEREVL 181
>sp|NEF_HV1S1|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GQDDPQSQLL 10
G DDP+ ++L
Sbjct: 174 GMDDPEKEVL 183
>sp|NEF_HV1RH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GQDDPQSQLL 10
G DDP+ ++L
Sbjct: 174 GMDDPEKEVL 183
>sp|NEF_HV1MN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GQDDPQSQLL 10
G DDP+ ++L
Sbjct: 174 GMDDPEREVL 183
>sp|NEF_HV1BN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GQDDPQSQLL 10
G DDP+ ++L
Sbjct: 184 GMDDPEREVL 193
>sp|PG130_VACCC|39KDA core protein OPG130|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 DDPQSQLLPA 12
D P S LLPA
Sbjct: 125 DAPASSLLPA 134
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 5 PQSQLLPAP 13
PQ++ PAP
Sbjct: 441 PQTKTTPAP 449
>sp|PG130_MONPV|39KDA core protein OPG130|Monkeypox virus (MPXV)
Query: 3 DDPQSQLLPA 12
D P S LLPA
Sbjct: 125 DAPASTLLPA 134
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 5 PQSQLLPAP 13
PQ++ PAP
Sbjct: 441 PQTKTTPAP 449
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 5 PQSQLLPAP 13
PQ++ PAP
Sbjct: 441 PQTKATPAP 449
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 4 DPQSQLLPAP 13
DP L PAP
Sbjct: 337 DPHGYLAPAP 346
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 8 QLLPAP 13
QLLPAP
Sbjct: 562 QLLPAP 567