TERA_HUMAN Blast Output
Viruses
1|Sequence|1|10|MASGADSKGD

>sp|SCAF_SCMVC|CAPSID scaffolding protein|Simian cytomegalovirus (strain Colburn)

Query: 3 SGADSKGD 10
SG+D+KGD
Sbjct: 469 SGSDAKGD 476




2|Sequence|6|15|DSKGDDLSTA

>sp|I7_FOWPN|CORE protease I7 homolog|Fowlpox virus (strain NVSL) (FPV)

Query: 1 DSKGDDLS 8
D KGDD+S
Sbjct: 138 DIKGDDVS 145




3|Sequence|11|20|DLSTAILKQK

>sp|VP4_ROTBV|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Cow/United

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKAK 644


>sp|VP4_ROTBU|OUTER capsid protein VP4|Rotavirus A (strain RVA/Cow/United

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKAK 644


>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKTK 644


>sp|VP4_ROTCU|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Dog/United

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKTK 644


>sp|VP4_ROTF6|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKTK 644


>sp|VP4_ROTB6|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKAK 644


>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 634 DISAAVLKTK 643


>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 634 DISAAVLKTK 643


>sp|VP4_ROTE1|OUTER capsid protein VP4|Rotavirus A (strain RVA/Equine/United

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKTK 644


>sp|VP4_ROTD9|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Dog/United

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKTK 644


>sp|VP4_ROTTU|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Monkey/United

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKTK 644


>sp|VP4_ROTRH|OUTER capsid protein VP4|Rotavirus A (strain RVA/Monkey/United

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKTK 644


>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 634 DISAAVLKTK 643


>sp|VP4_ROTEO|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKTK 644


>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 634 DISAAVLKTK 643


>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 634 DISAAVLKTK 643


>sp|VP4_ROTSS|OUTER capsid protein VP4|Rotavirus A (strain RVA/SA11-SEM/G3P5B[2])

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKTK 644


>sp|VP4_ROTSH|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Monkey/South

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKTK 644


>sp|VP4_ROTSF|OUTER capsid protein VP4|Rotavirus A (strain RVA/SA11-FEM/G3P6[1]) (RV-A)

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKTK 644


>sp|VP4_ROTS4|OUTER capsid protein VP4|Rotavirus A (strain RVA/SA11-4F/G3P6[1]) (RV-A)

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKTK 644


>sp|VP4_ROTS1|OUTER capsid protein VP4|Rotavirus A (strain RVA/SA11-Both/G3P5B[2])

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKTK 644


>sp|VP4_ROTP5|OUTER capsid protein VP4|Rotavirus A (strain RVA/Pig/United

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKTK 644


>sp|VP4_ROTME|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKTK 644


>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKTK 644


>sp|VP4_ROTEH|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Equine/United

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKTK 644


>sp|VP4_ROTAP|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Cow/South/Africa/Offal

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKTK 644


>sp|VP4_ROTBN|OUTER capsid protein VP4|Rotavirus A (strain RVA/Cow/United

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKTK 644


>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 634 DISAAVLKTK 643


>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 634 DISAAVLKTK 643


>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 634 DISAAVLKTK 643


>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 634 DISAAVLKTK 643


>sp|VP4_ROTP3|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKTK 644


>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 634 DISAAVLKTK 643


>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 634 DISAAVLKTK 643


>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 634 DISAAVLKTK 643


>sp|VP4_ROTBC|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKTK 644


>sp|VP4_ROTRF|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKTK 644


>sp|VP4_ROTPY|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKTK 644


>sp|VP4_ROT46|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 637 DISAAVLKTK 646


>sp|VP4_ROT18|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 DLSTAILKQK 10
D+S A+LK K
Sbjct: 635 DISAAVLKAK 644




4|Sequence|16|25|ILKQKNRPNR

>sp|VNS1_AHSV4|NON-STRUCTURAL protein NS1|African horse sickness virus 4

Query: 2 LKQKNRPNR 10
+Q+NRP+R
Sbjct: 123 FRQRNRPSR 131


>sp|VNS1_AHSV|NON-STRUCTURAL protein NS1|African horse sickness virus (AHSV)

Query: 2 LKQKNRPNR 10
+Q+NRP+R
Sbjct: 123 FRQRNRPSR 131


>sp|RDRP_TMVB|REPLICASE large subunit|Tobacco mosaic virus (strain B935A)

Query: 1 ILKQKNRPNR 10
+LK+K +PN+
Sbjct: 1251 LLKEKRKPNK 1260


>sp|RDRP_TMV|REPLICASE large subunit|Tobacco mosaic virus (strain vulgare)

Query: 1 ILKQKNRPNR 10
+LK+K +PN+
Sbjct: 1251 LLKEKRKPNK 1260


>sp|RDRP_TMVOM|REPLICASE large subunit|Tobacco mosaic virus (strain OM)

Query: 1 ILKQKNRPNR 10
+LK+K +PN+
Sbjct: 1251 LLKEKRKPNK 1260


>sp|RDRP_TMVRA|REPLICASE large subunit|Tobacco mosaic virus (strain Rakkyo)

Query: 1 ILKQKNRPNR 10
+LK+K +PN+
Sbjct: 1251 LLKEKRKPNK 1260


>sp|RDRP_TMVKR|REPLICASE large subunit|Tobacco mosaic virus (strain Korean

Query: 1 ILKQKNRPNR 10
+LK+K +PN+
Sbjct: 1251 LLKEKRKPNK 1260


>sp|RDRP_TBRFV|REPLICASE large subunit|Tomato brown rugose fruit virus

Query: 1 ILKQKNRPNR 10
+LK+K +PN+
Sbjct: 1251 LLKEKRKPNK 1260


>sp|RDRP_TOML|REPLICASE large subunit|Tomato mosaic virus (strain L)

Query: 1 ILKQKNRPNR 10
+LK+K +PN+
Sbjct: 1251 LLKEKRKPNK 1260


>sp|RDRP_TOMK2|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh

Query: 1 ILKQKNRPNR 10
+LK+K +PN+
Sbjct: 1251 LLKEKRKPNK 1260


>sp|RDRP_TOMK1|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh

Query: 1 ILKQKNRPNR 10
+LK+K +PN+
Sbjct: 1251 LLKEKRKPNK 1260


>sp|RDRP_TOMS1|REPLICASE large subunit|Tomato mosaic virus (strain S-1)

Query: 1 ILKQKNRPNR 10
+LK+K +PN+
Sbjct: 1251 LLKEKRKPNK 1260


>sp|GLYC_WWAVU|PRE-GLYCOPROTEIN polyprotein GP complex|Whitewater Arroyo mammarenavirus (isolate

Query: 1 ILKQKNRPNR 10
+ KQK RP R
Sbjct: 466 LFKQKGRPLR 475


>sp|POL2_BRAV|RNA2 polyprotein|Blackcurrant reversion association virus (BRAV)

Query: 1 ILKQKNRPN 9
I KQ+N PN
Sbjct: 985 IAKQQNTPN 993


>sp|FPS_AVISP|TYROSINE-PROTEIN kinase transforming protein Fps|Avian sarcoma virus (strain PRCII)

Query: 1 ILKQKNRPN 9
ILKQ N PN
Sbjct: 321 ILKQYNHPN 329


>sp|FPS_FUJSV|TYROSINE-PROTEIN kinase transforming protein Fps|Fujinami sarcoma virus (FSV)

Query: 1 ILKQKNRPN 9
ILKQ N PN
Sbjct: 661 ILKQCNHPN 669




5|Sequence|21|30|NRPNRLIVDE

>sp|DPOL_PPV01|DNA polymerase|Phaeocystis pouchetii virus (PpV01)

Query: 1 NRPNRLIVD 9
N P R+IVD
Sbjct: 546 NMPGRIIVD 554


>sp|1105L_ASFPP|PROTEIN MGF 110-5L|African swine fever virus (isolate

Query: 1 NRPNRLIV 8
NRP+RL++
Sbjct: 109 NRPHRLLM 116


>sp|1104B_ASFL5|PROTEIN MGF 110-4L-B|African swine fever virus (isolate

Query: 1 NRPNRLIV 8
NRP+RL++
Sbjct: 109 NRPHRLLM 116


>sp|RBP5_BPT5|RECEPTOR-BINDING protein pb5|Escherichia phage T5 (Enterobacteria phage

Query: 1 NRPNRLIVDE 10
N PNR+++ E
Sbjct: 77 NDPNRVVLTE 86


>sp|Y01H_BPT4|UNCHARACTERIZED 8.1 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 NRPNRLIVDE 10
NRPN + +D+
Sbjct: 12 NRPNSMYIDD 21


>sp|YL733_MIMIV|UNCHARACTERIZED ABC transporter ATP-binding protein/permease|Acanthamoeba polyphaga

Query: 1 NRPNRLIVDE 10
+RP+ LI+DE
Sbjct: 469 DRPSILILDE 478


>sp|L_RSVT|RNA-DIRECTED RNA polymerase L|Rice stripe virus (isolate T)

Query: 3 PNRLIVDE 10
PNR ++DE
Sbjct: 2058 PNRYLLDE 2065


>sp|YR555_MIMIV|UNCHARACTERIZED protein R555|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 NRPNRLIVDE 10
++PN LI+DE
Sbjct: 1266 SKPNFLIIDE 1275




6|Sequence|26|35|LIVDEAINED

>sp|TERL_LAMBD|TERMINASE, large subunit|Escherichia phage lambda (Bacteriophage lambda)

Query: 1 LIVDEAINE 9
L VDEAIN+
Sbjct: 439 LRVDEAINK 447


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 1 LIVDEAIN 8
L+VDEAI+
Sbjct: 1552 LVVDEAIS 1559


>sp|POLG_FMDVZ|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 IVDEAINE 9
+VD+A+NE
Sbjct: 1511 MVDDAVNE 1518


>sp|POLG_FMDVT|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 IVDEAINE 9
+VD+A+NE
Sbjct: 1505 MVDDAVNE 1512


>sp|POLG_FMDVS|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 IVDEAINE 9
+VD+A+NE
Sbjct: 1505 MVDDAVNE 1512


>sp|POLG_FMDVO|GENOME polyprotein|Foot-and-mouth disease virus serotype O

Query: 2 IVDEAINE 9
+VD+A+NE
Sbjct: 1510 MVDDAVNE 1517


>sp|POLG_FMDVI|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 IVDEAINE 9
+VD+A+NE
Sbjct: 1506 MVDDAVNE 1513


>sp|POLG_FMDVA|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 IVDEAINE 9
+VD+A+NE
Sbjct: 1511 MVDDAVNE 1518


>sp|POLG_FMDV5|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 IVDEAINE 9
+VD+A+NE
Sbjct: 1510 MVDDAVNE 1517


>sp|POLG_FMDV1|GENOME polyprotein|Foot-and-mouth disease virus (strain A10/Holland/1961

Query: 2 IVDEAINE 9
+VD+A+NE
Sbjct: 1510 MVDDAVNE 1517


>sp|POLG_FMDS2|GENOME polyprotein|Foot-and-mouth disease virus serotype SAT-2

Query: 2 IVDEAINE 9
+VDEA+N+
Sbjct: 1514 MVDEAVND 1521


>sp|TRM1_TUHV2|TRIPARTITE terminase subunit 1|Tupaiid herpesvirus (strain 2) (TuHV-2)

Query: 1 LIVDEAINE 9
L+VDEA+ E
Sbjct: 85 LLVDEALGE 93




7|Sequence|31|40|AINEDNSVVS

>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)

Query: 3 NEDNSVVS 10
NED SV+S
Sbjct: 222 NEDESVIS 229


>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 NEDNSVVS 10
NED SV+S
Sbjct: 221 NEDESVIS 228




8|Sequence|36|45|NSVVSLSQPK

>sp|1A_PZSVT|REPLICATION protein 1a|Pelargonium zonate spot virus (isolate

Query: 1 NSVVSLSQP 9
N+V SLS+P
Sbjct: 559 NTVTSLSEP 567




9|Sequence|41|50|LSQPKMDELQ

>sp|CAPSD_APRVF|INNER capsid protein VP3|Aedes pseudoscutellaris reovirus (isolate

Query: 1 LSQPKMDELQ 10
+SQPK+ E Q
Sbjct: 853 ISQPKVSERQ 862




10|Sequence|46|55|MDELQLFRGD

>sp|PRIM_OSHVF|PUTATIVE primase|Ostreid herpesvirus 1 (isolate France)

Query: 1 MDELQLF 7
M+ELQLF
Sbjct: 109 MEELQLF 115


>sp|MP_ASGVP|PROBABLE movement protein|Apple stem grooving virus (strain

Query: 3 ELQLFRGD 10
E +LFRGD
Sbjct: 241 EKRLFRGD 248


>sp|BNRDF_BPSPB|RIBONUCLEOSIDE-DIPHOSPHATE reductase subunit beta|Bacillus phage SPbeta (Bacillus phage

Query: 2 DELQLFRG 9
DE+ LF+G
Sbjct: 149 DEISLFKG 156




11|Sequence|51|60|LFRGDTVLLK

>sp|YL876_MIMIV|UNCHARACTERIZED protein L876|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 LFRGDTVLL 9
LFRGD ++L
Sbjct: 166 LFRGDNIIL 174


>sp|GT313_AFV1Y|PUTATIVE glycosyltransferase ORF313|Acidianus filamentous virus 1 (isolate

Query: 1 LFRGDTVL 8
FRGD+VL
Sbjct: 70 FFRGDSVL 77




12|Sequence|56|65|TVLLKGKKRR

>sp|POLG_HED68|GENOME polyprotein|Human enterovirus D68 (EV68) (EV-68)

Query: 3 LLKGKKRR 10
LL+GKK+R
Sbjct: 1848 LLQGKKKR 1855


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 3 LLKGKKRR 10
LL+GKK+R
Sbjct: 1854 LLQGKKKR 1861


>sp|ENV_MMTVG|ENVELOPE glycoprotein gp70|Mouse mammary tumor virus (strain

Query: 2 VLLKGKKRR 10
+LL GKK+R
Sbjct: 15 LLLSGKKQR 23


>sp|ENV_MMTVB|ENVELOPE glycoprotein gp70|Mouse mammary tumor virus (strain

Query: 2 VLLKGKKRR 10
+LL GKK+R
Sbjct: 15 LLLSGKKQR 23


>sp|GB_GPCMV|ENVELOPE glycoprotein B|Guinea pig cytomegalovirus (strain 22122)

Query: 1 TVLLKGKKRR 10
TVL+KG R+
Sbjct: 540 TVLIKGDMRK 549




13|Sequence|61|70|GKKRREAVCI

>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 5 REAVCI 10
REAVCI
Sbjct: 166 REAVCI 171


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 5 REAVCI 10
REAVCI
Sbjct: 166 REAVCI 171


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 1 GKKRREAVC 9
GK++R VC
Sbjct: 2903 GKRKRPRVC 2911




14|Sequence|66|75|EAVCIVLSDD

>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 3 VCIVLSD 9
VCIVLSD
Sbjct: 1992 VCIVLSD 1998


>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 VCIVLSDD 10
+C LSDD
Sbjct: 948 ICAALSDD 955


>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 VCIVLSDD 10
+C LSDD
Sbjct: 948 ICAALSDD 955




15|Sequence|71|80|VLSDDTCSDE

>sp|ENV_AVIR3|ENVELOPE glycoprotein|Avian retrovirus RPL30

Query: 4 DDTCSDE 10
DDTCSDE
Sbjct: 84 DDTCSDE 90


>sp|ENV_ALVA|ENVELOPE glycoprotein gp95|Avian leukosis virus subgroup A

Query: 4 DDTCSDE 10
DDTCSDE
Sbjct: 407 DDTCSDE 413


>sp|ENV_AVISR|ENVELOPE glycoprotein gp95|Avian sarcoma virus (strain rASV1441)

Query: 4 DDTCSDE 10
DDTCSDE
Sbjct: 47 DDTCSDE 53


>sp|ENV_RSVP|ENVELOPE glycoprotein gp95|Rous sarcoma virus subgroup C

Query: 4 DDTCSDE 10
DDTCSDE
Sbjct: 409 DDTCSDE 415


>sp|ENV_RSVSB|ENVELOPE glycoprotein gp95|Rous sarcoma virus subgroup B

Query: 4 DDTCSDE 10
DDTCSDE
Sbjct: 414 DDTCSDE 420


>sp|ENV_RSVSA|ENVELOPE glycoprotein gp95|Rous sarcoma virus subgroup A

Query: 4 DDTCSDE 10
DDTCSDE
Sbjct: 47 DDTCSDE 53


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 3 SDDTCSD 9
+DDTCSD
Sbjct: 2386 ADDTCSD 2392


>sp|RNL1_NPVAC|PUTATIVE bifunctional polynucleotide kinase/RNA ligase|Autographa

Query: 3 SDDTCSD 9
SDDTC D
Sbjct: 638 SDDTCKD 644


>sp|YL085_MIMIV|PUTATIVE BTB/POZ domain-containing protein L85|Acanthamoeba polyphaga

Query: 1 VLSDDTCSDE 10
VL DDTC E
Sbjct: 21 VLKDDTCEIE 30


>sp|L_BEFVB|RNA-DIRECTED RNA polymerase L|Bovine ephemeral fever virus (strain

Query: 1 VLSDDTCSDE 10
VLS + C+DE
Sbjct: 269 VLSMNVCTDE 278


>sp|HN_NDVH3|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Her/33)

Query: 4 DDTCSDE 10
+DTC DE
Sbjct: 341 NDTCPDE 347


>sp|HN_NDVL|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Chicken/United

Query: 4 DDTCSDE 10
+DTC DE
Sbjct: 341 NDTCPDE 347


>sp|HN_NDVK|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Kansas)

Query: 4 DDTCSDE 10
+DTC DE
Sbjct: 341 NDTCPDE 347




16|Sequence|76|85|TCSDEKIRMN

>sp|U21_HHV7R|U21 glycoprotein|Human herpesvirus 7 (strain RK)

Query: 2 CSDEKIR 8
CSD+KIR
Sbjct: 48 CSDDKIR 54


>sp|U21_HHV7J|U21 glycoprotein|Human herpesvirus 7 (strain JI)

Query: 2 CSDEKIR 8
CSD+KIR
Sbjct: 48 CSDDKIR 54


>sp|HEMA_INBTE|HEMAGGLUTININ B virus (strain B/Texas/1/1991)

Query: 3 SDEKIRMN 10
SD KI+MN
Sbjct: 208 SDNKIQMN 215


>sp|VF62_ASFK5|UNCHARACTERIZED protein C62L|African swine fever virus (isolate

Query: 2 CSDEKIRMN 10
C D +IR N
Sbjct: 27 CRDRRIRFN 35




17|Sequence|81|90|KIRMNRVVRN

>sp|POLG_SPMMV|GENOME polyprotein|Sweet potato mild mottle virus

Query: 1 KIRMNRVVRN 10
KIR+NR RN
Sbjct: 2237 KIRLNRDKRN 2246


>sp|RDRP_RRSVT|RNA-DIRECTED RNA polymerase|Rice ragged stunt virus (isolate

Query: 1 KIRMNRVVRN 10
K+R+ +++RN
Sbjct: 261 KLRLQKLIRN 270




18|Sequence|86|95|RVVRNNLRVR

>sp|YL027_MIMIV|UNCHARACTERIZED protein L27|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 RVVRNNLRV 9
+++RNNLR+
Sbjct: 60 KIIRNNLRL 68


>sp|CAPSD_GLRV3|CAPSID protein|Grapevine leafroll-associated virus 3 (isolate

Query: 2 VVRNNLRVR 10
V NNLRVR
Sbjct: 14 VPENNLRVR 22


>sp|PKG1_ADE05|PACKAGING protein 1|Human adenovirus C serotype 5

Query: 2 VVRNNLRVR 10
+VR N+RVR
Sbjct: 131 LVRENMRVR 139


>sp|YR267_MIMIV|PUTATIVE ankyrin repeat protein R267|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 VVRNNLRVR 10
++RNNL +R
Sbjct: 132 IIRNNLLIR 140


>sp|DEPOL_BPK56|DEPOLYMERASE, capsule KL47-specific|Klebsiella phage P560 (Bacteriophage P560)

Query: 2 VVRNNLRVR 10
+V NN+RVR
Sbjct: 620 IVGNNIRVR 628




19|Sequence|91|100|NLRVRLGDVI

>sp|CAPSD_GLRV3|CAPSID protein|Grapevine leafroll-associated virus 3 (isolate

Query: 1 NLRVRLGD 8
NLRVR+GD
Sbjct: 18 NLRVRVGD 25


>sp|YL077_MIMIV|UNCHARACTERIZED protein L77|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 NLRVRLGDVI 10
N+R++LGD +
Sbjct: 224 NVRIKLGDYL 233




20|Sequence|96|105|LGDVISIQPC

>sp|GB_ELHVK|ENVELOPE glycoprotein B|Elephantid herpesvirus 1 (isolate Asian

Query: 1 LGDVISIQPC 10
LGDVIS+ C
Sbjct: 514 LGDVISVSKC 523


>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 LGDVISIQPC 10
LGDVIS+ C
Sbjct: 519 LGDVISVSQC 528


>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 LGDVISIQPC 10
LGDVIS+ C
Sbjct: 519 LGDVISVSQC 528


>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 LGDVISIQPC 10
LGDVIS+ C
Sbjct: 519 LGDVISVSQC 528


>sp|GB_SHV21|ENVELOPE glycoprotein B|Saimiriine herpesvirus 2 (strain 11)

Query: 1 LGDVISIQPC 10
LGDVIS+ C
Sbjct: 489 LGDVISVTEC 498


>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)

Query: 1 LGDVISIQPC 10
LGDVIS+ C
Sbjct: 575 LGDVISVSNC 584


>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 LGDVISIQPC 10
LGDVIS+ C
Sbjct: 575 LGDVISVSNC 584


>sp|GB_ALHV1|ENVELOPE glycoprotein B|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 LGDVISIQPC 10
+GDVIS+ C
Sbjct: 518 IGDVISVSHC 527


>sp|GB_EHV2|ENVELOPE glycoprotein B|Equine herpesvirus 2 (strain 86/87)

Query: 1 LGDVISIQPC 10
+GDV+S+ C
Sbjct: 514 IGDVVSVSDC 523


>sp|GB_RHCM6|ENVELOPE glycoprotein B|Rhesus cytomegalovirus (strain 68-1) (RhCMV)

Query: 1 LGDVISIQPC 10
+GDVIS+ C
Sbjct: 515 VGDVISLAKC 524


>sp|GB_GPCMV|ENVELOPE glycoprotein B|Guinea pig cytomegalovirus (strain 22122)

Query: 1 LGDVISIQPC 10
+GDVIS+ C
Sbjct: 524 VGDVISLAKC 533


>sp|GLYCO_SHRV|GLYCOPROTEIN rhabdovirus (SHRV)

Query: 1 LGDVISIQP 9
LGD+I I+P
Sbjct: 270 LGDLIRIEP 278


>sp|011L_IIV3|UNCHARACTERIZED protein 011L|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 GDVISIQP 9
GDV+S++P
Sbjct: 234 GDVVSLEP 241


>sp|MCE_RGDV|PUTATIVE mRNA-capping enzyme P5|Rice gall dwarf virus (RGDV)

Query: 3 DVISIQP 9
DV+SIQP
Sbjct: 471 DVMSIQP 477


>sp|PORTL_BPHK7|PORTAL protein|Enterobacteria phage HK97 (Bacteriophage HK97)

Query: 2 GDVISIQP 9
GDVIS+ P
Sbjct: 140 GDVISLLP 147


>sp|NCAP_IPPYV|NUCLEOPROTEIN mammarenavirus (isolate Rat/Central African

Query: 1 LGDVISIQP 9
+GD+ ++QP
Sbjct: 436 IGDLFNVQP 444


>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P

Query: 1 LGDVISIQPC 10
+GD IS+ C
Sbjct: 519 VGDAISVTEC 528




21|Sequence|101|110|SIQPCPDVKY

>sp|DPOL_ICHVA|DNA polymerase|Ictalurid herpesvirus 1 (strain Auburn)

Query: 4 PCPDVK 9
PCPD+K
Sbjct: 1042 PCPDIK 1047


>sp|SEA_AVIET|TYROSINE-PROTEIN kinase transforming protein SEA|Avian erythroblastosis virus

Query: 3 QPCPDVKY 10
QPCPD Y
Sbjct: 288 QPCPDTLY 295


>sp|GB_HSVA1|ENVELOPE glycoprotein B|Herpesvirus ateles type 1 (strain

Query: 3 QPCPDV 8
+PCPDV
Sbjct: 151 RPCPDV 156


>sp|GB_SHV1|ENVELOPE glycoprotein B|Saimiriine herpesvirus 1 (strain MV-5-4-PSL)

Query: 3 QPCPDV 8
+PCPDV
Sbjct: 142 RPCPDV 147


>sp|DGTPH_BPPMB|DATP/DGTP diphosphohydrolase|Salmonella phage PMBT28

Query: 1 SIQPCPD 7
S+QP PD
Sbjct: 112 SVQPVPD 118


>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain

Query: 2 IQPCPDVK 9
I+ CPD+K
Sbjct: 593 IRSCPDLK 600


>sp|VF179_IIV6|UNCHARACTERIZED protein 179R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 SIQPCPDVKY 10
SI+PC D+ +
Sbjct: 1112 SIKPCTDLTF 1121


>sp|DCTD_BPT2|DEOXYCYTIDYLATE deaminase|Enterobacteria phage T2 (Bacteriophage T2)

Query: 1 SIQPCPD 7
++ PCPD
Sbjct: 128 TLSPCPD 134


>sp|DCTD_BPT4|DEOXYCYTIDYLATE deaminase|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 SIQPCPD 7
++ PCPD
Sbjct: 128 TLSPCPD 134


>sp|PAX_I04A1|PROTEIN PA-X|Influenza A virus (strain A/Vietnam/1203/2004

Query: 1 SIQPCPDVK 9
S++PC D++
Sbjct: 207 SLEPCADLQ 215


>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P

Query: 3 QPCPDVK 9
Q CPD K
Sbjct: 83 QTCPDTK 89


>sp|ST_POVS1|SMALL t antigen|Simian virus 12 (strain wt100)

Query: 4 PCPDVKY 10
PCPD Y
Sbjct: 88 PCPDTLY 94


>sp|VF282_IIV3|PUTATIVE transcription factor 079L|Invertebrate iridescent virus 3 (IIV-3)

Query: 3 QPCPDVKY 10
QPC +++Y
Sbjct: 295 QPCDNIEY 302


>sp|SPIKE_IBVK|SPIKE glycoprotein|Avian infectious bronchitis virus (strain

Query: 1 SIQPCPDVKY 10
S++ CP V Y
Sbjct: 542 SVENCPYVSY 551


>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)

Query: 2 IQPCPDVK 9
I+PCP +K
Sbjct: 241 IKPCPFLK 248




22|Sequence|106|115|PDVKYGKRIH

>sp|VF706_ASFWA|TERMINATION factor NPH-I homolog|African swine fever virus (isolate

Query: 2 DVKYGKRIH 10
D+KYG+++H
Sbjct: 508 DLKYGRQVH 516


>sp|TFNPH_ASFM2|TERMINATION factor NPH-I homolog|African swine fever virus (isolate

Query: 2 DVKYGKRIH 10
D+KYG+++H
Sbjct: 508 DLKYGRQVH 516


>sp|TFNPH_ASFP4|TERMINATION factor NPH-I homolog|African swine fever virus (isolate

Query: 2 DVKYGKRIH 10
D+KYG+++H
Sbjct: 508 DLKYGRQVH 516


>sp|TFNPH_ASFK5|TERMINATION factor NPH-I homolog|African swine fever virus (isolate

Query: 2 DVKYGKRIH 10
D+KYG+++H
Sbjct: 508 DLKYGRQVH 516


>sp|TFNPH_ASFB7|TERMINATION factor NPH-I homolog|African swine fever virus (strain

Query: 2 DVKYGKRIH 10
D+KYG+++H
Sbjct: 508 DLKYGRQVH 516


>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)

Query: 1 PDVKYGKR 8
PDV YGK+
Sbjct: 607 PDVTYGKK 614


>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)

Query: 1 PDVKYGKR 8
PDV YGK+
Sbjct: 607 PDVTYGKK 614


>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 VKYGKRIH 10
+KYG RIH
Sbjct: 168 MKYGGRIH 175


>sp|VP4_ROTF6|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 3 VKYGKRIH 10
+KYG RIH
Sbjct: 168 MKYGGRIH 175


>sp|VP4_ROTD9|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Dog/United

Query: 3 VKYGKRIH 10
+KYG RIH
Sbjct: 168 MKYGGRIH 175


>sp|VP4_ROTCU|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Dog/United

Query: 3 VKYGKRIH 10
+KYG RIH
Sbjct: 168 MKYGGRIH 175


>sp|PAP1_LSDV|POLY(A) polymerase catalytic subunit|Lumpy skin disease virus (LSDV)

Query: 1 PDVKYG 6
PDVKYG
Sbjct: 187 PDVKYG 192


>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)

Query: 1 PDVKYGKR 8
PDV YGK+
Sbjct: 273 PDVTYGKK 280


>sp|ENV_FIVWO|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (isolate Wo)

Query: 2 DVKYGKR 8
++KYGKR
Sbjct: 143 NIKYGKR 149


>sp|ENV_FIVU8|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (strain UK8)

Query: 2 DVKYGKR 8
++KYGKR
Sbjct: 143 NIKYGKR 149


>sp|ENV_FIVU1|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (strain UT-113)

Query: 2 DVKYGKR 8
++KYGKR
Sbjct: 143 NIKYGKR 149


>sp|CVC1_EHV1B|CAPSID vertex component 1|Equine herpesvirus 1 (strain Ab4p)

Query: 1 PDVKYGKRI 9
P V YG RI
Sbjct: 210 PQVSYGARI 218


>sp|PAP1_SWPV1|POLY(A) polymerase catalytic subunit|Swinepox virus (strain

Query: 1 PDVKYG 6
PDV+YG
Sbjct: 186 PDVRYG 191


>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 1 PDVKYGKRIH 10
P V+Y R+H
Sbjct: 459 PYVRYSHRLH 468


>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 1 PDVKYGKRIH 10
P V+Y R+H
Sbjct: 459 PYVRYSHRLH 468


>sp|VP4_ROTW3|OUTER capsid protein VP4|Rotavirus A (strain RVA/Cow/United

Query: 3 VKYGKRI 9
+KYGKR+
Sbjct: 168 MKYGKRL 174


>sp|PAP1_MYXVL|POLY(A) polymerase catalytic subunit|Myxoma virus (strain Lausanne) (MYXV)

Query: 1 PDVKYG 6
P+VKYG
Sbjct: 186 PEVKYG 191


>sp|PAP1_RFVKA|POLY(A) polymerase catalytic subunit|Rabbit fibroma virus (strain Kasza)

Query: 1 PDVKYG 6
P+VKYG
Sbjct: 186 PEVKYG 191


>sp|Y025_NPVOP|UNCHARACTERIZED 34.6 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 3 VKYGKRIH 10
VKYGK I
Sbjct: 265 VKYGKEIQ 272


>sp|Y132_NPVOP|UNCHARACTERIZED 26.0 kDa protein in|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 4 KYGKRIH 10
KYGKR++
Sbjct: 33 KYGKRVN 39




23|Sequence|111|120|GKRIHVLPID

>sp|VINT_BPSFV|INTEGRASE phage Sf6 (Shigella flexneri

Query: 1 GKRIHVLPI 9
G++IHV+P+
Sbjct: 262 GRKIHVVPM 270


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 1 GKRIHVLPID 10
G+RI +PID
Sbjct: 1612 GRRIGAIPID 1621


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 1 GKRIHVLPID 10
GKR+ +PID
Sbjct: 1612 GKRLGAIPID 1621


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 1 GKRIHVLPID 10
GKR+ +PID
Sbjct: 1612 GKRLGAIPID 1621


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 1 GKRIHVLPID 10
G+RI +PID
Sbjct: 1612 GRRIGAVPID 1621


>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)

Query: 1 GKRIHVL 7
GK+IH+L
Sbjct: 565 GKKIHIL 571


>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1 GKRIHVL 7
GK+IH+L
Sbjct: 565 GKKIHIL 571


>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus

Query: 1 GKRIHVL 7
GK+IH+L
Sbjct: 565 GKKIHIL 571


>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate

Query: 1 GKRIHVL 7
GK+IH+L
Sbjct: 565 GKKIHIL 571


>sp|ETF2_VACCW|EARLY transcription factor 82 kDa|Vaccinia virus (strain Western Reserve)

Query: 1 GKRIHVL 7
GK+IH+L
Sbjct: 565 GKKIHIL 571


>sp|VG11_SHV21|UNCHARACTERIZED gene 11 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 2 KRIHVLPID 10
+ IH+LP D
Sbjct: 44 REIHILPDD 52


>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)

Query: 1 GKRIHVL 7
GK+IH+L
Sbjct: 565 GKKIHIL 571


>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)

Query: 1 GKRIHVL 7
GK+IH+L
Sbjct: 565 GKKIHIL 571


>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)

Query: 2 KRIHVLPID 10
KR+H P+D
Sbjct: 645 KRLHEKPLD 653




24|Sequence|116|125|VLPIDDTVEG

>sp|PRIM_ELHVK|DNA primase|Elephantid herpesvirus 1 (isolate Asian

Query: 3 PIDDTVE 9
P+DDT+E
Sbjct: 71 PVDDTIE 77


>sp|ENV_FIVT2|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (isolate TM2)

Query: 1 VLPIDDT 7
V+P+DDT
Sbjct: 184 VVPVDDT 190


>sp|RIR1_VACCW|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Western Reserve)

Query: 4 IDDTVEG 10
IDD++EG
Sbjct: 224 IDDSIEG 230


>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4 IDDTVEG 10
IDD++EG
Sbjct: 224 IDDSIEG 230


>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 4 IDDTVEG 10
IDD++EG
Sbjct: 224 IDDSIEG 230


>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)

Query: 4 IDDTVEG 10
IDD++EG
Sbjct: 224 IDDSIEG 230


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1 VLPIDDTV 8
VLP DDT+
Sbjct: 1597 VLPSDDTL 1604


>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 1 VLPIDDTV 8
VLP DDT+
Sbjct: 1595 VLPSDDTL 1602


>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 1 VLPIDDTV 8
VLP DDT+
Sbjct: 1591 VLPSDDTL 1598


>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 1 VLPIDDTV 8
VLP DDT+
Sbjct: 1603 VLPSDDTL 1610


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 VLPIDDTV 8
VLP DDT+
Sbjct: 1597 VLPSDDTL 1604


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 1 VLPIDDTV 8
VLP DDT+
Sbjct: 1595 VLPSDDTL 1602


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 1 VLPIDDTV 8
VLP DDT+
Sbjct: 1591 VLPSDDTL 1598


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 1 VLPIDDTV 8
VLP DDT+
Sbjct: 1603 VLPSDDTL 1610


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 1 VLPIDDTVEG 10
VLP D VEG
Sbjct: 236 VLPYCDVVEG 245


>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 2 LPIDDT 7
LP+DDT
Sbjct: 2395 LPVDDT 2400




25|Sequence|121|130|DTVEGITGNL

>sp|HN_SV41|HEMAGGLUTININ-NEURAMINIDASE virus 41 (SV41)

Query: 1 DTVEGITGNL 10
DT+ ITGN+
Sbjct: 57 DTLNAITGNI 66


>sp|ENV_MLVCB|ENVELOPE glycoprotein|Cas-Br-E murine leukemia virus

Query: 1 DTVEGITGN 9
DTV +TGN
Sbjct: 54 DTVWAVTGN 62




26|Sequence|126|135|ITGNLFEVYL

>sp|VG02_ICHVA|UNCHARACTERIZED protein ORF2|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 GNLFEVYL 10
GNL EVY+
Sbjct: 148 GNLLEVYV 155


>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 ITGNLFEVYL 10
I+GN FE Y
Sbjct: 502 ISGNAFEPYF 511


>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 1 ITGNLFEVYL 10
I+GN FE Y
Sbjct: 502 ISGNAFEPYF 511


>sp|ORF23_HHV8P|PROTEIN ORF23|Human herpesvirus 8 type P

Query: 2 TGNLFEVY 9
TGNL ++Y
Sbjct: 392 TGNLLKIY 399


>sp|CAPSD_CRV|CAPSID protein|Cymbidium ringspot virus (CymRSV)

Query: 1 ITGNLFEV 8
ITGNL+++
Sbjct: 123 ITGNLYKI 130




27|Sequence|131|140|FEVYLKPYFL

>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1 FEVYLKPYFL 10
+ +++KPYF
Sbjct: 3037 YTIFMKPYFF 3046


>sp|LF2_EBVG|PROTEIN LF2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 EVYLKPYFL 10
EV+LKP+F+
Sbjct: 110 EVFLKPFFV 118


>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 EVYLKPYFL 10
EV+LKP+F+
Sbjct: 110 EVFLKPFFV 118


>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 EVYLKPYFL 10
EV+LKP+F+
Sbjct: 110 EVFLKPFFV 118


>sp|YL247_MIMIV|UNCHARACTERIZED HNH endonuclease L247|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 FEVYLKP 7
F VYLKP
Sbjct: 50 FSVYLKP 56


>sp|D13_SWPVK|SCAFFOLD protein D13 ortholog|Swinepox virus (strain Kasza) (SWPV)

Query: 1 FEVYLKPYF 9
VY+KPY+
Sbjct: 256 LSVYIKPYY 264


>sp|POL1_BPMV|RNA1 polyprotein|Bean-pod mottle virus (strain Kentucky

Query: 4 YLKPYF 9
Y+KPYF
Sbjct: 1539 YVKPYF 1544


>sp|REP_TYLCI|REPLICATION-ASSOCIATED protein|Tomato yellow leaf curl virus

Query: 1 FEVYLKPYFL 10
F++Y K YFL
Sbjct: 5 FKIYAKNYFL 14


>sp|IKBN1_MDBVW|I-KAPPA-B like protein N1|Microplitis demolitor bracovirus (isolate Webb)

Query: 3 VYLKPYFL 10
VYLK Y+L
Sbjct: 101 VYLKDYYL 108


>sp|D13_FOWPV|SCAFFOLD protein|Fowlpox virus (FPV)

Query: 3 VYLKPYF 9
VY+KPY+
Sbjct: 261 VYVKPYY 267


>sp|D13_FOWPN|SCAFFOLD protein|Fowlpox virus (strain NVSL) (FPV)

Query: 3 VYLKPYF 9
VY+KPY+
Sbjct: 261 VYVKPYY 267


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)

Query: 2 EVYLKP 7
EVYLKP
Sbjct: 1360 EVYLKP 1365


>sp|PG125_VACCW|SCAFFOLD protein OPG125|Vaccinia virus (strain Western Reserve)

Query: 1 FEVYLKPYF 9
VY KPY+
Sbjct: 255 LSVYTKPYY 263


>sp|PG125_VACCT|SCAFFOLD protein OPG125|Vaccinia virus (strain Tian Tan)

Query: 1 FEVYLKPYF 9
VY KPY+
Sbjct: 255 LSVYTKPYY 263


>sp|PG125_VACCC|SCAFFOLD protein OPG125|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 FEVYLKPYF 9
VY KPY+
Sbjct: 255 LSVYTKPYY 263


>sp|PG125_VACCA|SCAFFOLD protein OPG125|Vaccinia virus (strain Ankara) (VACV)

Query: 1 FEVYLKPYF 9
VY KPY+
Sbjct: 255 LSVYTKPYY 263


>sp|PG125_VAR67|SCAFFOLD protein OPG125|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 FEVYLKPYF 9
VY KPY+
Sbjct: 255 LSVYTKPYY 263


>sp|D13_VARV|SCAFFOLD protein D13|Variola virus

Query: 1 FEVYLKPYF 9
VY KPY+
Sbjct: 255 LSVYTKPYY 263


>sp|PG125_MONPV|SCAFFOLD protein OPG125|Monkeypox virus (MPXV)

Query: 1 FEVYLKPYF 9
VY KPY+
Sbjct: 255 LSVYTKPYY 263




28|Sequence|136|145|KPYFLEAYRP

>sp|ENV_THOGV|ENVELOPE glycoprotein|Thogoto virus (isolate SiAr 126)

Query: 2 PYFLEAYRP 10
PY L+ Y+P
Sbjct: 27 PYILDRYKP 35


>sp|RFCS2_MIMIV|PUTATIVE replication factor C small|Acanthamoeba polyphaga mimivirus

Query: 3 YFLEAYRP 10
+F E YRP
Sbjct: 2 FFFEKYRP 9


>sp|YR154_MIMIV|PUTATIVE BTB/POZ domain and WD-repeat|Acanthamoeba polyphaga mimivirus

Query: 3 YFLEAYR 9
Y+LE YR
Sbjct: 91 YYLETYR 97


>sp|GLYCO_SHRV|GLYCOPROTEIN rhabdovirus (SHRV)

Query: 2 PYFLEAYRP 10
PY L +RP
Sbjct: 335 PYLLSKFRP 343


>sp|TERM_ADECR|PRETERMINAL protein|Canine adenovirus serotype 1 (strain

Query: 2 PYFLEAYRP 10
PY +E +RP
Sbjct: 131 PYTVEVFRP 139


>sp|VP5_APRVF|OUTER capsid protein VP5|Aedes pseudoscutellaris reovirus (isolate

Query: 1 KPYFLEAY 8
KPY EAY
Sbjct: 659 KPYTYEAY 666


>sp|POL1_CRLVP|RNA1 polyprotein|Cherry rasp leaf virus (isolate

Query: 1 KPYFLE 6
KPYFLE
Sbjct: 1571 KPYFLE 1576


>sp|TERM_ADECC|PRETERMINAL protein|Canine adenovirus serotype 1 (strain

Query: 2 PYFLEAYRP 10
PY +E +RP
Sbjct: 16 PYTVEVFRP 24


>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 KPYFLEAYRP 10
+ Y LEAY P
Sbjct: 112 QKYALEAYTP 121


>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 KPYFLEAYRP 10
+ Y LEAY P
Sbjct: 112 QKYALEAYMP 121


>sp|CAPSD_ANV1|CAPSID polyprotein VP90|Avian nephritis virus 1 (ANV-1)

Query: 3 YFLEAYR 9
YFL AYR
Sbjct: 574 YFLVAYR 580




29|Sequence|141|150|EAYRPIRKGD

>sp|MATA2_BPSP|MATURATION protein A2|Enterobacteria phage SP (Bacteriophage SP)

Query: 1 EAYRPIRKGD 10
E YR +R+GD
Sbjct: 168 EGYRAVRRGD 177


>sp|POL1_ARMVN|RNA1 polyprotein|Arabis mosaic virus (isolate NW)

Query: 1 EAYRPIRKG 9
E Y PIR+G
Sbjct: 1528 EGYTPIREG 1536


>sp|SPIK2_ADEG1|FIBER protein 2|Fowl adenovirus A serotype 1

Query: 1 EAYRPIRKG 9
E+YRPI G
Sbjct: 337 ESYRPIFTG 345


>sp|VL1_PCPV1|MAJOR capsid protein L1|Pygmy chimpanzee papillomavirus type 1

Query: 3 YRPIRKGD 10
Y PIRKG+
Sbjct: 48 YFPIRKGN 55


>sp|DNMK_BPT4|DEOXYNUCLEOTIDE monophosphate kinase|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 EAYRPIRKGD 10
EA PIR GD
Sbjct: 209 EAGLPIRDGD 218


>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 269 AYKIVKKGD 277


>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 269 AYKIVKKGD 277


>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 269 AYKIVKKGD 277


>sp|HEMA_I87A1|HEMAGGLUTININ A virus (strain A/Mallard/Ohio/556/1987

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 269 AYKIVKKGD 277


>sp|HEMA_I83A6|HEMAGGLUTININ A virus (strain A/Chicken/Pennsylvania/1370/1983

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 252 AYKIVKKGD 260


>sp|HEMA_I83A5|HEMAGGLUTININ A virus (strain A/Chicken/Pennsylvania/1/1983

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 269 AYKIVKKGD 277


>sp|HEMA_I61A0|HEMAGGLUTININ A virus (strain A/Tern/South

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 269 AYKIVKKGD 277


>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 269 AYKIVKKGD 277


>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 269 AYKIVKKGD 277


>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 269 AYKIVKKGD 277


>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 269 AYKIVKKGD 277


>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 269 AYKIVKKGD 277


>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 269 AYKIVKKGD 277


>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 269 AYKIVKKGD 277


>sp|HEMA_I83A3|HEMAGGLUTININ A virus (strain A/Duck/Ireland/113/1983

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 269 AYKIVKKGD 277


>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 267 AYKIVKKGD 275


>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 258 AYKIVKKGD 266


>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 258 AYKIVKKGD 266


>sp|HEMA_I83A4|HEMAGGLUTININ A virus (strain A/Turkey/Ireland/1378/1983

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 269 AYKIVKKGD 277


>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 258 AYKIVKKGD 266


>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 258 AYKIVKKGD 266


>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 261 AYKIVKKGD 269


>sp|MCP_NPVAC|MAJOR capsid protein|Autographa californica nuclear polyhedrosis virus

Query: 1 EAYRPIRKGD 10
E Y PIR D
Sbjct: 248 ELYNPIRSSD 257


>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 269 AYKIVKKGD 277


>sp|HEMA_I66A0|HEMAGGLUTININ A virus (strain A/Turkey/Ontario/7732/1966

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 269 AYKIVKKGD 277


>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 265 AYKIVKKGD 273


>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong

Query: 2 AYRPIRKGD 10
AY+ ++KGD
Sbjct: 269 AYKIVKKGD 277


>sp|Y05C_BPT4|UNCHARACTERIZED 15.3 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 EAYRPIRKGD 10
E Y I KGD
Sbjct: 75 ETYSSIEKGD 84


>sp|VP39_NPVOP|MAJOR capsid protein|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 1 EAYRPIRKGD 10
E Y P+R D
Sbjct: 247 ELYNPVRSSD 256




30|Sequence|146|155|IRKGDIFLVR

>sp|LLP_BPT5|LYTIC conversion lipoprotein|Escherichia phage T5 (Enterobacteria phage

Query: 2 RKGDIFLV 9
RKGD+FLV
Sbjct: 44 RKGDMFLV 51


>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961

Query: 3 KGDIFLVR 10
KGDIF++R
Sbjct: 111 KGDIFVIR 118


>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New

Query: 3 KGDIFLVR 10
KGDIF++R
Sbjct: 111 KGDIFVMR 118


>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New

Query: 3 KGDIFLVR 10
KGDIF++R
Sbjct: 111 KGDIFVMR 118


>sp|NRAM_I67A2|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1967

Query: 3 KGDIFLVR 10
KGDIF++R
Sbjct: 111 KGDIFVMR 118


>sp|TIPJ_BPSE4|TIP attachment protein J|Escherichia phage SECphi4

Query: 2 RKGDIFLVR 10
R GD FLVR
Sbjct: 525 RPGDKFLVR 533


>sp|POLG_PVYO|GENOME polyprotein|Potato virus Y (strain O)

Query: 4 GDIFLVR 10
GD+F+VR
Sbjct: 253 GDLFIVR 259




31|Sequence|151|160|IFLVRGGMRA

>sp|POL1_TRSV|RNA1 polyprotein|Tobacco ringspot virus (TobRV) (TRSV)

Query: 1 IFLVRGGMR 9
+F VRGG+R
Sbjct: 1834 VFEVRGGIR 1842


>sp|VL1_MMPV1|MAJOR capsid protein L1|Macaca mulata papillomavirus 1 (Rhpv

Query: 2 FLVRGGMRA 10
FL++ GMRA
Sbjct: 466 FLLQAGMRA 474


>sp|C792_SSV1|UNCHARACTERIZED protein C-792|Sulfolobus spindle-shape virus 1 (SSV1)

Query: 1 IFLVRGGM 8
I+L++GGM
Sbjct: 147 IYLMKGGM 154




32|Sequence|156|165|GGMRAVEFKV

***** No hits found ******


33|Sequence|161|170|VEFKVVETDP

>sp|POLG_PESV|GENOME polyprotein|Porcine enteric sapovirus (isolate Swine/United

Query: 1 VEFKVVETD 9
VEFKV ETD
Sbjct: 1089 VEFKVAETD 1097


>sp|SAK_BPP42|STAPHYLOKINASE phage 42D (Bacteriophage P42D)

Query: 2 EFKVVETDP 10
EF+VVE DP
Sbjct: 102 EFRVVELDP 110


>sp|SAK_BPSPC|STAPHYLOKINASE phage S phi-C (Bacteriophage

Query: 2 EFKVVETDP 10
EF+VVE DP
Sbjct: 102 EFRVVELDP 110


>sp|SAK_BPPHD|STAPHYLOKINASE phage phi13 (Bacteriophage phi-13)

Query: 2 EFKVVETDP 10
EF+VVE DP
Sbjct: 102 EFRVVELDP 110


>sp|YR400_MIMIV|PUTATIVE serine/threonine-protein kinase R400|Acanthamoeba polyphaga

Query: 3 FKVVETDP 10
FKV+ TDP
Sbjct: 411 FKVIMTDP 418


>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse

Query: 1 VEFKVVET 8
V+FK VET
Sbjct: 1134 VQFKTVET 1141


>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare

Query: 1 VEFKVVET 8
V+FK VET
Sbjct: 1134 VQFKTVET 1141


>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United

Query: 1 VEFKVVET 8
V+FK VET
Sbjct: 1134 VQFKTVET 1141


>sp|PORTL_BPCA1|PORTAL protein|Bacteroides phage crAss001 (Bacteroides phage

Query: 2 EFKVVETDP 10
+FKVV T+P
Sbjct: 104 DFKVVVTNP 112




34|Sequence|166|175|VETDPSPYCI

>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 VETDPSPY 8
V TDP+PY
Sbjct: 75 VPTDPTPY 82


>sp|TCB_FLV|VIRAL T-cell receptor beta chain-like|Feline leukemia virus

Query: 1 VETDPSPY 8
V TDP PY
Sbjct: 200 VSTDPEPY 207


>sp|YR325_MIMIV|UNCHARACTERIZED protein R325|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 ETDPSPYC 9
E DP+ YC
Sbjct: 180 EADPAEYC 187


>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)

Query: 4 DPSPY 8
DPSPY
Sbjct: 250 DPSPY 254


>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)

Query: 1 VETDPSPYC 9
+ PSPYC
Sbjct: 618 ITPSPSPYC 626


>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B

Query: 2 ETDPSPYCI 10
E DP+ YC+
Sbjct: 572 EFDPNDYCL 580


>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A

Query: 2 ETDPSPYCI 10
E DP+ YC+
Sbjct: 572 EFDPNDYCL 580


>sp|YL442_MIMIV|UNCHARACTERIZED protein L442|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 VETDPSPYCI 10
V+TDP+ C+
Sbjct: 828 VQTDPADNCL 837


>sp|VP39_NPVOP|MAJOR capsid protein|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 3 TDPSPYC 9
TDP YC
Sbjct: 162 TDPQAYC 168


>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 5 PSPYC 9
PSPYC
Sbjct: 621 PSPYC 625


>sp|YL199_MIMIV|UNCHARACTERIZED protein L199|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 TDPSPYC 9
TDP+ YC
Sbjct: 224 TDPTEYC 230


>sp|GB_RHCM6|ENVELOPE glycoprotein B|Rhesus cytomegalovirus (strain 68-1) (RhCMV)

Query: 2 ETDPSPYCI 10
E+DPS CI
Sbjct: 357 ESDPSFQCI 365


>sp|PHOSP_NDVB1|PHOSPHOPROTEIN disease virus (strain Chicken/United

Query: 4 DPSPYCI 10
DPSPY I
Sbjct: 311 DPSPYVI 317


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 1 VETDPSPY 8
VET+P P+
Sbjct: 1039 VETNPGPF 1046


>sp|SPIKE_ADE15|FIBER protein|Human adenovirus D serotype 15

Query: 4 DPSPYC 9
DPSP C
Sbjct: 187 DPSPNC 192


>sp|BPJ_BPP2|BASEPLATE protein J|Escherichia phage P2 (Bacteriophage P2)

Query: 3 TDPSPYCI 10
T PSP C+
Sbjct: 161 TSPSPACV 168


>sp|SPIKE_ADE04|FIBER protein|Human adenovirus E serotype 4

Query: 4 DPSPYC 9
DPSP C
Sbjct: 254 DPSPNC 259


>sp|SPIKE_ADE02|FIBER protein|Human adenovirus C serotype 2

Query: 4 DPSPYC 9
DPSP C
Sbjct: 406 DPSPNC 411


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 1 VETDPSPYC 9
VETD +P C
Sbjct: 2095 VETDLNPVC 2103


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 1 VETDPSPYC 9
VETD +P C
Sbjct: 2095 VETDLNPVC 2103


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 1 VETDPSPY 8
+ET+P P+
Sbjct: 1037 IETNPGPF 1044


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 1 VETDPSPY 8
+ET+P P+
Sbjct: 1039 IETNPGPF 1046


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)

Query: 1 VETDPSPY 8
+ET+P P+
Sbjct: 1039 IETNPGPF 1046


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 1 VETDPSPY 8
+ET+P P+
Sbjct: 1039 IETNPGPF 1046




35|Sequence|171|180|SPYCIVAPDT

>sp|VP09_BPAPS|PUTATIVE protein p9|Acyrthosiphon pisum secondary endosymbiont phage

Query: 2 PYCIVAP 8
PYC++AP
Sbjct: 328 PYCLMAP 334


>sp|NS1_INBLE|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Lee/1940)

Query: 2 PYCIVAPDT 10
PYC+ P T
Sbjct: 102 PYCVKNPST 110


>sp|YVAQ_VACCC|UNCHARACTERIZED 8.6 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 SPYCIVAPDT 10
SPYC++A +
Sbjct: 62 SPYCLIAKSS 71


>sp|POL2_APMV|RNA2 polyprotein|Andean potato mottle virus (APMV)

Query: 1 SPYCIVAPDT 10
SP C+ PDT
Sbjct: 244 SPRCLFFPDT 253


>sp|MVP_FMVD|MOVEMENT protein|Figwort mosaic virus (strain DxS)

Query: 1 SPYCIVAP 8
SP+C ++P
Sbjct: 254 SPFCDISP 261


>sp|1A_PSVJ|REPLICATION protein 1a|Peanut stunt virus (strain J)

Query: 2 PYCIVA 7
PYC+VA
Sbjct: 968 PYCLVA 973


>sp|ICP4_GAHVG|MAJOR viral transcription factor ICP4|Gallid herpesvirus 2 (strain GA)

Query: 3 YCIVAPDT 10
+C+ APDT
Sbjct: 1075 FCVPAPDT 1082


>sp|ICP4_GAHVM|MAJOR viral transcription factor ICP4|Gallid herpesvirus 2 (strain

Query: 3 YCIVAPDT 10
+C+ APDT
Sbjct: 1981 FCVPAPDT 1988


>sp|CAPSD_RHDVR|SUBGENOMIC capsid protein VP60|Rabbit calicivirus (Ra/LV/RHDV/RCV/1995/IT)

Query: 1 SPYCIVAPD 9
+P C VAPD
Sbjct: 323 NPICQVAPD 331


>sp|YL781_MIMIV|UNCHARACTERIZED protein L781|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 SPYCIVAP 8
+P+C++AP
Sbjct: 123 NPWCVLAP 130


>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka

Query: 2 PYCIVAP 8
PY IVAP
Sbjct: 1038 PYVIVAP 1044


>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)

Query: 2 PYCIVAP 8
PY IVAP
Sbjct: 1038 PYVIVAP 1044


>sp|Y510_SIRV1|UNCHARACTERIZED protein 510|Sulfolobus islandicus rod-shaped virus 1

Query: 4 CIVAPDT 10
C++AP+T
Sbjct: 294 CVLAPET 300


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 1 SPYCIVAPD 9
S CI+AP+
Sbjct: 212 STLCIIAPE 220


>sp|DYR_HHV8P|PUTATIVE Dihydrofolate reductase|Human herpesvirus 8 type P

Query: 3 YCIVAPDT 10
YC+VA DT
Sbjct: 6 YCVVAVDT 13




36|Sequence|176|185|VAPDTVIHCE

>sp|GLYCP_NIPAV|GLYCOPROTEIN G|Nipah virus

Query: 3 PDTVIHC 9
P+TV HC
Sbjct: 276 PNTVYHC 282


>sp|SPHR_AMEPV|SPHEROIDIN moorei entomopoxvirus (AmEPV)

Query: 2 APDTVIH 8
+PDT IH
Sbjct: 427 SPDTTIH 433


>sp|YR624_MIMIV|PUTATIVE GTP-binding protein R624|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 TVIHCE 10
TVIHC+
Sbjct: 390 TVIHCK 395




37|Sequence|181|190|VIHCEGEPIK

>sp|HMUD2_BPSAV|5-HMDU DNA kinase 2|Salmonella phage ViI

Query: 4 CEGEPI 9
CEGEP+
Sbjct: 104 CEGEPL 109


>sp|RPOB_NPVOP|PROBABLE DNA-directed RNA polymerase subunit|Orgyia pseudotsugata

Query: 2 IHCEGEP 8
+ CEGEP
Sbjct: 259 LECEGEP 265


>sp|UL95_ALHV1|GENE 34 protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 IHCEGEP 8
+HC G+P
Sbjct: 7 LHCNGDP 13


>sp|SPIKE_WBV24|SPIKE glycoprotein|White bream virus (isolate Blicca

Query: 2 IHCEGEP 8
+HC+G P
Sbjct: 377 MHCDGSP 383


>sp|PHOSP_RABVS|PHOSPHOPROTEIN virus (strain SAD B19)

Query: 3 HCEGEPIK 10
H +GEPI+
Sbjct: 38 HLQGEPIE 45


>sp|PHOSP_RABVR|PHOSPHOPROTEIN virus (strain China/MRV) (RABV)

Query: 3 HCEGEPIK 10
H +GEPI+
Sbjct: 38 HLQGEPIE 45


>sp|PHOSP_RABVP|PHOSPHOPROTEIN virus (strain Pasteur vaccins

Query: 3 HCEGEPIK 10
H +GEPI+
Sbjct: 38 HLQGEPIE 45


>sp|PHOSP_RABVN|PHOSPHOPROTEIN virus (strain Nishigahara RCEH)

Query: 3 HCEGEPIK 10
H +GEPI+
Sbjct: 38 HLQGEPIE 45


>sp|PHOSP_RABVM|PHOSPHOPROTEIN virus (strain PM) (RABV)

Query: 3 HCEGEPIK 10
H +GEPI+
Sbjct: 38 HLQGEPIE 45


>sp|PHOSP_RABVI|PHOSPHOPROTEIN virus (strain India) (RABV)

Query: 3 HCEGEPIK 10
H +GEPI+
Sbjct: 38 HLQGEPIE 45


>sp|PHOSP_RABVH|PHOSPHOPROTEIN virus (strain HEP-Flury) (RABV)

Query: 3 HCEGEPIK 10
H +GEPI+
Sbjct: 38 HLQGEPIE 45


>sp|PHOSP_RABVE|PHOSPHOPROTEIN virus (strain ERA) (RABV)

Query: 3 HCEGEPIK 10
H +GEPI+
Sbjct: 38 HLQGEPIE 45


>sp|PHOSP_RABVD|PHOSPHOPROTEIN virus (strain China/DRV) (RABV)

Query: 3 HCEGEPIK 10
H +GEPI+
Sbjct: 38 HLQGEPIE 45


>sp|PHOSP_RABVC|PHOSPHOPROTEIN virus (strain CVS-11) (RABV)

Query: 3 HCEGEPIK 10
H +GEPI+
Sbjct: 38 HLQGEPIE 45


>sp|PHOSP_RABVB|PHOSPHOPROTEIN virus (strain silver-haired bat-associated)

Query: 3 HCEGEPIK 10
H +GEPI+
Sbjct: 38 HLQGEPIE 45


>sp|PHOSP_RABVA|PHOSPHOPROTEIN virus (strain PM1503/AVO1) (RABV)

Query: 3 HCEGEPIK 10
H +GEPI+
Sbjct: 38 HLQGEPIE 45


>sp|PHOSP_KHUV|PHOSPHOPROTEIN virus (KHUV)

Query: 3 HCEGEPIK 10
H +GEPI+
Sbjct: 38 HLQGEPIE 45


>sp|PHOSP_ABLVH|PHOSPHOPROTEIN bat lyssavirus (isolate Human/AUS/1998)

Query: 3 HCEGEPIK 10
H +GEPI+
Sbjct: 38 HLQGEPIE 45


>sp|VE2_HPV61|REGULATORY protein E2|Human papillomavirus type 61

Query: 1 VIHCEGEPIK 10
VIH +G+P K
Sbjct: 302 VIHLKGDPNK 311


>sp|PHOSP_EBLV2|PHOSPHOPROTEIN bat lyssavirus 2 (strain

Query: 3 HCEGEPIK 10
H +GEPI+
Sbjct: 38 HLQGEPIE 45


>sp|PHOSP_ABLVB|PHOSPHOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)

Query: 3 HCEGEPIK 10
H +GEPI+
Sbjct: 38 HLQGEPIE 45


>sp|YR636_MIMIV|PUTATIVE FNIP repeat-containing protein R636|Acanthamoeba polyphaga

Query: 3 HCEGEPIK 10
HC +PIK
Sbjct: 229 HCFDQPIK 236


>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30

Query: 1 VIHCEGEP 8
V+H +GEP
Sbjct: 300 VVHLKGEP 307


>sp|L_TIBVC|RNA-DIRECTED RNA polymerase L|Tibrogargan virus (strain CS132) (TIBV)

Query: 3 HCEGEPIK 10
+CEG P K
Sbjct: 1164 YCEGGPYK 1171


>sp|FIBER_BPE15|TAIL spike protein|Salmonella phage epsilon15

Query: 1 VIHCEGE 7
+ HCEG+
Sbjct: 279 ITHCEGK 285


>sp|VE2_HPV56|REGULATORY protein E2|Human papillomavirus 56

Query: 1 VIHCEGEP 8
V+H +GEP
Sbjct: 237 VVHLKGEP 244


>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 1 VIHCEG 6
V HCEG
Sbjct: 172 VYHCEG 177


>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)

Query: 1 VIHCEG 6
V HCEG
Sbjct: 172 VYHCEG 177


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 1 VIHCEG 6
V HCEG
Sbjct: 172 VYHCEG 177


>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32

Query: 1 VIHCEGEP 8
VIH +G+P
Sbjct: 310 VIHLQGDP 317


>sp|089R_FRG3G|UNCHARACTERIZED protein 89R|Frog virus 3 (isolate Goorha)

Query: 3 HCEGE 7
HCEGE
Sbjct: 284 HCEGE 288


>sp|VE8E2_HPV54|PROTEIN E8^E2C|Human papillomavirus type 54

Query: 1 VIHCEGEP 8
++H +GEP
Sbjct: 97 IVHFKGEP 104


>sp|VE2_HPV54|REGULATORY protein E2|Human papillomavirus type 54

Query: 1 VIHCEGEP 8
++H +GEP
Sbjct: 289 IVHFKGEP 296


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3 HCEGEPIK 10
H EG+P++
Sbjct: 526 HVEGQPVE 533


>sp|YL060_MIMIV|PUTATIVE F-box and FNIP repeat-containing|Acanthamoeba polyphaga mimivirus

Query: 3 HCEGEPIK 10
HC PIK
Sbjct: 363 HCYNHPIK 370


>sp|POL_WDSV|GAG-POL polyprotein|Walleye dermal sarcoma virus (WDSV)

Query: 2 IHCEGEP 8
+HC G P
Sbjct: 1573 LHCPGHP 1579


>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3 HCEGEPIK 10
H EG+P++
Sbjct: 524 HIEGQPVE 531


>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42

Query: 1 VIHCEGEP 8
VIH +G+P
Sbjct: 314 VIHLQGDP 321


>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 IHCEGEPI 9
+HC+G+ I
Sbjct: 3537 VHCDGQLI 3544




38|Sequence|186|195|GEPIKREDEE

>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus

Query: 3 PIKREDEE 10
PIKRED E
Sbjct: 38 PIKREDVE 45


>sp|RPO1_MIMIV|DNA-DIRECTED RNA polymerase subunit 1|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 GEPIKREDE 9
EP+KR DE
Sbjct: 183 AEPVKRTDE 191


>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)

Query: 3 PIKREDEE 10
P K EDEE
Sbjct: 205 PAKSEDEE 212


>sp|VP3_ARMVT|PROTEIN P3|Arabis mosaic virus large satellite

Query: 1 GEPIKRED 8
G+PIKR D
Sbjct: 279 GQPIKRCD 286


>sp|GE_CHV1E|ENVELOPE glycoprotein E|Cercopithecine herpesvirus 1 (strain E2490)

Query: 1 GEPIKREDEE 10
G P R+DEE
Sbjct: 177 GTPPPRDDEE 186




39|Sequence|191|200|REDEEESLNE

>sp|049L_IIV6|TRANSMEMBRANE protein 049L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 REDEEESLN 9
+ DEEE+LN
Sbjct: 32 KRDEEETLN 40


>sp|CMTR_NPVAC|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Autographa californica

Query: 1 REDEEESLN 9
RE+E+E LN
Sbjct: 148 RENEQERLN 156




40|Sequence|196|205|ESLNEVGYDD

>sp|DEPOL_BPK71|DEPOLYMERASE, capsule K1-specific|Klebsiella phage KpV71 (Bacteriophage KpV71)

Query: 3 LNEVGYDD 10
+NE GYDD
Sbjct: 242 INEFGYDD 249


>sp|DEPOL_BPKNT|DEPOLYMERASE, capsule K1-specific|Klebsiella phage NTUH-K2044-K1-1 (Bacteriophage

Query: 3 LNEVGYDD 10
+NE GYDD
Sbjct: 242 INEFGYDD 249


>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)

Query: 1 ESLNEVGYD 9
ES NE+ YD
Sbjct: 903 ESFNEIKYD 911


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 4 NEVGYD 9
NEVGYD
Sbjct: 2104 NEVGYD 2109


>sp|PG107_VACCW|PROTEIN OPG107|Vaccinia virus (strain Western Reserve)

Query: 1 ESLNEVGY 8
E LNE+GY
Sbjct: 165 EMLNELGY 172


>sp|H2_VACCA|LATE protein H2|Vaccinia virus (strain Ankara) (VACV)

Query: 1 ESLNEVGY 8
E LNE+GY
Sbjct: 165 EMLNELGY 172


>sp|PG107_VAR67|LATE protein H2|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 ESLNEVGY 8
E LNE+GY
Sbjct: 165 EMLNELGY 172


>sp|PG107_MONPV|MPXVGP092 virus (MPXV)

Query: 1 ESLNEVGY 8
E LNE+GY
Sbjct: 165 EMLNELGY 172


>sp|H2_VARV|LATE protein H2|Variola virus

Query: 1 ESLNEVGY 8
E LNE+GY
Sbjct: 165 EMLNELGY 172


>sp|PG107_VACCC|PROTEIN H2|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 ESLNEVGY 8
E LNE+GY
Sbjct: 165 EMLNELGY 172


>sp|VGPCR_HHV8P|VIRAL G-protein coupled receptor|Human herpesvirus 8 type P

Query: 1 ESLNEVGYD 9
E+LN GYD
Sbjct: 19 ETLNMSGYD 27


>sp|373L_IIV6|UNCHARACTERIZED protein 373L|Invertebrate iridescent virus 6 (IIV-6)

Query: 3 LNEVGYD 9
+NE+GYD
Sbjct: 124 VNEIGYD 130


>sp|GNA1_MIMIV|PROBABLE glucosamine 6-phosphate N-acetyltransferase|Acanthamoeba

Query: 2 SLNEVGYDD 10
S+NE+ +DD
Sbjct: 4 SINELNFDD 12


>sp|F13_FOWPN|ENVELOPE protein F13 homolog|Fowlpox virus (strain NVSL) (FPV)

Query: 1 ESLNEVGYD 9
+SLNE+G D
Sbjct: 284 KSLNELGVD 292




41|Sequence|201|210|VGYDDIGGCR

>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United

Query: 1 VGYDDIGGC 9
+G+ D+GGC
Sbjct: 318 IGFPDLGGC 326


>sp|R1AB_BYVU|REPLICASE polyprotein 1ab|Beet yellows virus (isolate Ukraine)

Query: 3 YDDIGGC 9
+ DIGGC
Sbjct: 701 FSDIGGC 707


>sp|VC04_SWPVK|PROTEIN C4|Swinepox virus (strain Kasza) (SWPV)

Query: 3 YDDIGGCR 10
YDD+ GC+
Sbjct: 267 YDDMFGCK 274


>sp|CAPSD_BPPSP|MAJOR capsid protein|Staphylococcus phage S13'

Query: 1 VGYDDIGG 8
+ +DD+GG
Sbjct: 271 ISFDDLGG 278


>sp|CAPSD_BPPS4|MAJOR capsid protein|Staphylococcus phage S24-1

Query: 1 VGYDDIGG 8
+ +DD+GG
Sbjct: 271 ISFDDLGG 278


>sp|CAPSD_BP44A|MAJOR capsid protein|Staphylococcus phage 44AHJD

Query: 1 VGYDDIGG 8
+ +DD+GG
Sbjct: 271 ISFDDLGG 278


>sp|FIBER_BPSPP|TAIL spike protein|Bacillus phage SPP1 (Bacteriophage SPP1)

Query: 2 GYDDIGGCR 10
G D GGCR
Sbjct: 23 GDRDAGGCR 31


>sp|RDRP_SBMVA|REPLICASE polyprotein P2AB|Southern bean mosaic virus (isolate

Query: 1 VGYDDIG 7
VG++DIG
Sbjct: 299 VGFEDIG 305


>sp|P2A_SBMVA|POLYPROTEIN P2A|Southern bean mosaic virus (isolate

Query: 1 VGYDDIG 7
VG++DIG
Sbjct: 299 VGFEDIG 305


>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United

Query: 1 VGYDDIGGC 9
VG+ D G C
Sbjct: 321 VGFPDFGKC 329


>sp|50510_ASFWA|PROTEIN MGF 505-10R|African swine fever virus (isolate

Query: 3 YDDIGGC 9
YD IG C
Sbjct: 101 YDQIGDC 107


>sp|50510_ASFP4|PROTEIN MGF 505-10R|African swine fever virus (isolate

Query: 3 YDDIGGC 9
YD IG C
Sbjct: 101 YDQIGDC 107


>sp|50510_ASFK5|PROTEIN MGF 505-10R|African swine fever virus (isolate

Query: 3 YDDIGGC 9
YD IG C
Sbjct: 101 YDQIGDC 107


>sp|Y009_OSHVF|PUTATIVE RING finger protein ORF9|Ostreid herpesvirus 1 (isolate France)

Query: 3 YDDIGGC 9
YD IG C
Sbjct: 354 YDKIGNC 360




42|Sequence|206|215|IGGCRKQLAQ

>sp|Y054_OSHVF|UNCHARACTERIZED protein ORF54|Ostreid herpesvirus 1 (isolate France)

Query: 1 IGGCRKQL 8
IGGC K L
Sbjct: 573 IGGCEKSL 580


>sp|XCORE_HBVC4|PUTATIVE X-Core fused protein|Hepatitis B virus genotype C

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVG3|PROTEIN X|Hepatitis B virus genotype G

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVF1|PROTEIN X|Hepatitis B virus genotype F2

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVB3|PROTEIN X|Hepatitis B virus genotype B2

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVC9|PROTEIN X|Hepatitis B virus genotype C

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVA2|PROTEIN X|Hepatitis B virus genotype A2

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVB5|PROTEIN X|Hepatitis B virus genotype B2

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVB4|PROTEIN X|Hepatitis B virus genotype B/C

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVF6|PROTEIN X|Hepatitis B virus genotype F2

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVB7|PROTEIN X|Hepatitis B virus genotype B1

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVD7|PROTEIN X|Hepatitis B virus genotype D

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVB6|PROTEIN X|Hepatitis B virus genotype B2

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVCJ|PROTEIN X|Hepatitis B virus genotype C

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVB8|PROTEIN X|Hepatitis B virus genotype B1

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVC2|PROTEIN X|Hepatitis B virus genotype C

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVD2|PROTEIN X|Hepatitis B virus genotype D

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVB1|PROTEIN X|Hepatitis B virus genotype B1

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVF4|PROTEIN X|Hepatitis B virus genotype F2

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVA3|PROTEIN X|Hepatitis B virus genotype A2

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVC7|PROTEIN X|Hepatitis B virus genotype C

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVC3|PROTEIN X|Hepatitis B virus genotype C

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVC1|PROTEIN X|Hepatitis B virus genotype C

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVA9|PROTEIN X|Hepatitis B virus genotype A3

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVD5|PROTEIN X|Hepatitis B virus genotype D

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVGO|PROTEIN X|Gorilla hepatitis B virus (isolate

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVCP|PROTEIN X|Chimpanzee hepatitis B virus (isolate

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVH1|PROTEIN X|Hepatitis B virus genotype H

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVF2|PROTEIN X|Hepatitis B virus genotype F1

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVD6|PROTEIN X|Hepatitis B virus genotype D

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVD3|PROTEIN X|Hepatitis B virus genotype D

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVA7|PROTEIN X|Hepatitis B virus genotype A2

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVA4|PROTEIN X|Hepatitis B virus genotype A2

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVC0|PROTEIN X|Hepatitis B virus genotype C

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVE1|PROTEIN X|Hepatitis B virus genotype E

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVE3|PROTEIN X|Hepatitis B virus genotype E

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVA6|PROTEIN X|Hepatitis B virus genotype A1

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVH2|PROTEIN X|Hepatitis B virus genotype H

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVGB|PROTEIN X|Gibbon hepatitis B virus subtype

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVD4|PROTEIN X|Hepatitis B virus genotype D

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVH3|PROTEIN X|Hepatitis B virus genotype H

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVE2|PROTEIN X|Hepatitis B virus genotype E

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVA8|PROTEIN X|Hepatitis B virus genotype A3

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVB2|PROTEIN X|Hepatitis B virus genotype B2

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|X_HBVE4|PROTEIN X|Hepatitis B virus genotype E

Query: 1 IGGCRKQL 8
+GGCR +L
Sbjct: 134 LGGCRHKL 141


>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 IGGCRKQLAQ 10
+ GCRK++ +
Sbjct: 81 VRGCRKEIGR 90




43|Sequence|211|220|KQLAQIKEMV

***** No hits found ******


44|Sequence|216|225|IKEMVELPLR

>sp|VP7_AQRVC|OUTER capsid protein VP7|Aquareovirus C (isolate Golden

Query: 2 KEMVELPLR 10
K++VELP R
Sbjct: 123 KDIVELPFR 131


>sp|RP18_VACCW|DNA-DIRECTED RNA polymerase 18 kDa|Vaccinia virus (strain Western Reserve)

Query: 1 IKEMVELPL 9
I+E VELPL
Sbjct: 50 IREDVELPL 58


>sp|RP18_VACCC|DNA-DIRECTED RNA polymerase 18 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 IKEMVELPL 9
I+E VELPL
Sbjct: 50 IREDVELPL 58


>sp|RP18_VACCA|DNA-DIRECTED RNA polymerase 18 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1 IKEMVELPL 9
I+E VELPL
Sbjct: 50 IREDVELPL 58


>sp|RP18_MONPV|DNA-DIRECTED RNA polymerase 18 kDa|Monkeypox virus (MPXV)

Query: 1 IKEMVELPL 9
I+E VELPL
Sbjct: 50 IREDVELPL 58




45|Sequence|221|230|ELPLRHPALF

>sp|GM_BHV1C|ENVELOPE glycoprotein M|Bovine herpesvirus 1.1 (strain Cooper)

Query: 1 ELPLRHPALF 10
EL RHPALF
Sbjct: 69 ELGARHPALF 78


>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)

Query: 1 ELPLRHP 7
E+PLRHP
Sbjct: 457 EVPLRHP 463


>sp|GLYCO_WCBV|GLYCOPROTEIN Caucasian bat virus (WCBV)

Query: 2 LPLRHPALF 10
+P RHP L
Sbjct: 412 VPFRHPMLL 420


>sp|DNB2_ADES1|DNA-BINDING protein|Snake adenovirus serotype 1 (SnAdV-1)

Query: 4 LRHPALF 10
+RHPA+F
Sbjct: 266 VRHPAVF 272


>sp|UL24_VZVO|PROTEIN UL24 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 1 ELPLRHPAL 9
+LPLR P+L
Sbjct: 233 DLPLRRPSL 241


>sp|POLN_SAV2|POLYPROTEIN P1234|Alphavirus salmon subtype 2 (SAV2)

Query: 1 ELPLRHPAL 9
+LP HPAL
Sbjct: 18 DLPADHPAL 26


>sp|POL_BLVAU|GAG-PRO-POL polyprotein|Bovine leukemia virus (isolate Australian)

Query: 4 LRHPALF 10
LRHPA+F
Sbjct: 1090 LRHPAIF 1096


>sp|UL24_VZVD|PROTEIN UL24 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 ELPLRHPAL 9
+LPLR P+L
Sbjct: 233 DLPLRRPSL 241


>sp|GLYCO_IRKV|GLYCOPROTEIN virus (IRKV)

Query: 2 LPLRHP 7
+PLRHP
Sbjct: 412 IPLRHP 417


>sp|YL410_MIMIV|PUTATIVE core protein L410|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 LPLRHP 7
LP+RHP
Sbjct: 595 LPVRHP 600


>sp|GLYCO_ARAV|GLYCOPROTEIN virus (ARAV)

Query: 2 LPLRHP 7
+PLRHP
Sbjct: 412 IPLRHP 417


>sp|GLYCO_EBLV1|GLYCOPROTEIN bat lyssavirus 1 (strain

Query: 2 LPLRHP 7
+PLRHP
Sbjct: 412 IPLRHP 417


>sp|POLN_SAV1|POLYPROTEIN P1234|Alphavirus salmon subtype 1 (SAV1)

Query: 2 LPLRHPAL 9
LP HPAL
Sbjct: 19 LPADHPAL 26


>sp|VL2_CRPVK|MINOR capsid protein L2|Cottontail rabbit papillomavirus (strain Kansas)

Query: 2 LPLRHP 7
+PLRHP
Sbjct: 207 VPLRHP 212


>sp|GLYCO_MOKV|GLYCOPROTEIN virus (MOKV)

Query: 2 LPLRHPAL 9
PLRHP +
Sbjct: 412 FPLRHPLI 419


>sp|US25_HCMVA|UNCHARACTERIZED protein US25|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 LPLRHPA 8
PLRHPA
Sbjct: 92 FPLRHPA 98


>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)

Query: 1 ELPLRHP 7
E PLRHP
Sbjct: 454 EGPLRHP 460




46|Sequence|226|235|HPALFKAIGV

>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 1 HPALFKAIGV 10
HP FKA+G+
Sbjct: 1936 HPIWFKALGM 1945


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 1 HPALFKAIG 9
HP FKA+G
Sbjct: 1935 HPIWFKALG 1943


>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 HPALFKAIG 9
H AL+K+IG
Sbjct: 2406 HTALYKSIG 2414


>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 HPALFKAIG 9
H AL+K+IG
Sbjct: 2406 HTALYKSIG 2414


>sp|VP35_MABVR|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ravn-87)

Query: 1 HPALFKAIGV 10
PA+FK +GV
Sbjct: 161 QPAIFKDLGV 170


>sp|VP35_MABVA|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1 HPALFKAIGV 10
PA+FK +GV
Sbjct: 161 QPAIFKDLGV 170


>sp|VP35_MABVO|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1 HPALFKAIGV 10
PA+FK +GV
Sbjct: 161 QPAIFKDLGV 170


>sp|VP35_MABVM|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1 HPALFKAIGV 10
PA+FK +GV
Sbjct: 161 QPAIFKDLGV 170


>sp|VP35_MABVP|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Popp-67)

Query: 1 HPALFKAIGV 10
PA+FK +GV
Sbjct: 161 QPAIFKDLGV 170


>sp|CAPSD_WDVS|CAPSID protein|Wheat dwarf virus (isolate Sweden)

Query: 1 HPALFKAIGV 10
H FKAIG+
Sbjct: 250 HACYFKAIGI 259


>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 1 HPALFKAIGV 10
+PA+FK +G+
Sbjct: 6371 NPAIFKNLGI 6380


>sp|L_BEFVB|RNA-DIRECTED RNA polymerase L|Bovine ephemeral fever virus (strain

Query: 1 HPALFKAI 8
HP ++KAI
Sbjct: 1487 HPKIYKAI 1494


>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA

Query: 1 HPALFKAIG 9
+P L+K+IG
Sbjct: 2163 YPVLYKSIG 2171


>sp|DPO26_BPK64|DEPOLYMERASE, capsule K30/K69-specific|Klebsiella phage K64-1 (Bacteriophage

Query: 1 HPALFKAIG 9
HP FK +G
Sbjct: 317 HPMTFKGLG 325


>sp|BTRF1_EBVG|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 PALFKAIGV 10
PALF+A G+
Sbjct: 47 PALFRASGL 55


>sp|BTRF1_EBVB9|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 PALFKAIGV 10
PALF+A G+
Sbjct: 47 PALFRASGL 55


>sp|BTRF1_EBVA8|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 PALFKAIGV 10
PALF+A G+
Sbjct: 47 PALFRASGL 55


>sp|ROS_AVISU|TYROSINE-PROTEIN kinase transforming protein ros|UR2 avian sarcoma virus (UR2SV)

Query: 1 HPALFKAIGV 10
HP + K +GV
Sbjct: 159 HPHILKLLGV 168




47|Sequence|231|240|KAIGVKPPRG

>sp|36016_ASFWA|PROTEIN MGF 360-16R|African swine fever virus (isolate

Query: 1 KAIGVKPPRG 10
K++G KPP+G
Sbjct: 108 KSLGAKPPKG 117


>sp|36016_ASFB7|PROTEIN MGF 360-16R|African swine fever virus (strain

Query: 1 KAIGVKPPRG 10
K++G KPP+G
Sbjct: 108 KSLGAKPPKG 117


>sp|36016_ASFP4|PROTEIN MGF 360-16R|African swine fever virus (isolate

Query: 1 KAIGVKPPRG 10
+++G KPP+G
Sbjct: 108 ESLGAKPPKG 117


>sp|36016_ASFM2|PROTEIN MGF 360-16R|African swine fever virus (isolate

Query: 1 KAIGVKPPRG 10
+++G KPP+G
Sbjct: 108 ESLGAKPPKG 117


>sp|36016_ASFK5|PROTEIN MGF 360-16R|African swine fever virus (isolate

Query: 1 KAIGVKPPRG 10
+++G KPP+G
Sbjct: 108 ESLGAKPPKG 117


>sp|POL1_TBRVM|RNA1 polyprotein|Tomato black ring virus (strain

Query: 3 IGVKPPRG 10
IGV PPR
Sbjct: 1508 IGVDPPRA 1515


>sp|Y209_ATV|UNCHARACTERIZED protein ORF209|Acidianus two-tailed virus (ATV)

Query: 4 GVKPPR 9
GVKPPR
Sbjct: 82 GVKPPR 87


>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58

Query: 3 IGVKPPRG 10
IG KPP G
Sbjct: 186 IGCKPPTG 193


>sp|CEP1_GAHVM|CYTOPLASMIC envelopment protein 1|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 KAIGVKPP 8
K IG+ PP
Sbjct: 122 KTIGIPPP 129


>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67

Query: 3 IGVKPPRG 10
IG KPP G
Sbjct: 189 IGCKPPTG 196


>sp|PORTL_LAMBD|PORTAL protein B|Escherichia phage lambda (Bacteriophage lambda)

Query: 1 KAIGVKPP 8
+A G+KPP
Sbjct: 501 RAAGLKPP 508


>sp|L_BDVV|RNA-DIRECTED RNA polymerase L|Borna disease virus (strain V)

Query: 1 KAIGVKP 7
K++GVKP
Sbjct: 1417 KSVGVKP 1423


>sp|L_BDV1|RNA-DIRECTED RNA polymerase L|Borna disease virus 1 (BoDV-1)

Query: 1 KAIGVKP 7
K++GVKP
Sbjct: 1417 KSVGVKP 1423


>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41

Query: 2 AIGVKPP 8
A+GV PP
Sbjct: 263 AVGVNPP 269




48|Sequence|236|245|KPPRGILLYG

>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 1 KPPRGILLYG 10
+PPR + YG
Sbjct: 851 RPPRAVAYYG 860


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 1 KPPRGILLYG 10
+PPR + YG
Sbjct: 851 RPPRAVAYYG 860


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 1 KPPRGILLYG 10
+PPR + YG
Sbjct: 849 RPPRAVPYYG 858


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 1 KPPRGILLYG 10
+PPR + YG
Sbjct: 849 RPPRAVPYYG 858


>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)

Query: 2 PPRGILLY 9
PP+G +LY
Sbjct: 54 PPKGTILY 61


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 1 KPPRGILLYG 10
+PPR + YG
Sbjct: 850 RPPRAVPYYG 859


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 1 KPPRGILLYG 10
+PPR + YG
Sbjct: 850 RPPRAVPYYG 859


>sp|YR776_MIMIV|UNCHARACTERIZED protein R776|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 RGILLYG 10
RG+LLYG
Sbjct: 202 RGMLLYG 208


>sp|YR476_MIMIV|PUTATIVE AAA family ATPase R476|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 KPPRGILLYG 10
+P +GI+L+G
Sbjct: 601 RPVKGIILHG 610


>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 PPRGILLY 9
PP+GI Y
Sbjct: 453 PPQGIFFY 460


>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)

Query: 1 KPPRGIL 7
KPPRG L
Sbjct: 60 KPPRGFL 66


>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)

Query: 1 KPPRGIL 7
KPPRG L
Sbjct: 60 KPPRGFL 66


>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)

Query: 1 KPPRGIL 7
KPPRG L
Sbjct: 60 KPPRGFL 66


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 3 PRGILLYG 10
P G+ LYG
Sbjct: 2635 PAGVFLYG 2642


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 3 PRGILLYG 10
P G+ LYG
Sbjct: 2635 PAGVFLYG 2642


>sp|HEPA_EHV2|DNA helicase/primase complex-associated protein|Equine herpesvirus 2

Query: 1 KPPRGILLY 9
+PP GILL+
Sbjct: 361 RPPGGILLH 369


>sp|RDRP_PEMVW|PROTEIN P1-P2|Pea enation mosaic virus-1 (strain

Query: 2 PPRGILL 8
PP+G++L
Sbjct: 330 PPKGVIL 336


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 2 PPRGILL 8
PP G+LL
Sbjct: 147 PPEGVLL 153


>sp|Y529_ATV|UNCHARACTERIZED protein ORF529|Acidianus two-tailed virus (ATV)

Query: 5 GILLYG 10
GILLYG
Sbjct: 111 GILLYG 116


>sp|P1_PEMVW|PROTEIN P1|Pea enation mosaic virus-1 (strain

Query: 2 PPRGILL 8
PP+G++L
Sbjct: 330 PPKGVIL 336




49|Sequence|241|250|ILLYGPPGTG

>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54

Query: 1 ILLYGPPGTG 10
ILLYGPP TG
Sbjct: 456 ILLYGPPDTG 465


>sp|YR476_MIMIV|PUTATIVE AAA family ATPase R476|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 ILLYGPPGTG 10
I+L+GPPGTG
Sbjct: 606 IILHGPPGTG 615


>sp|RFCS4_MIMIV|PUTATIVE replication factor C small|Acanthamoeba polyphaga mimivirus

Query: 2 LLYGPPGTG 10
L YGPPGTG
Sbjct: 44 LFYGPPGTG 52


>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21

Query: 1 ILLYGPPGTG 10
IL+YGPP TG
Sbjct: 427 ILIYGPPNTG 436


>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19

Query: 1 ILLYGPPGTG 10
IL+YGPP TG
Sbjct: 428 ILIYGPPNTG 437


>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14

Query: 1 ILLYGPPGTG 10
IL+YGPP TG
Sbjct: 429 ILIYGPPNTG 438


>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25

Query: 1 ILLYGPPGTG 10
IL YGPP TG
Sbjct: 428 ILFYGPPNTG 437


>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73

Query: 1 ILLYGPPGTG 10
I+LYGPP TG
Sbjct: 474 IVLYGPPDTG 483


>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24

Query: 1 ILLYGPPGTG 10
+L+YGPP TG
Sbjct: 431 LLIYGPPNTG 440


>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8

Query: 1 ILLYGPPGTG 10
+L+YGPP TG
Sbjct: 427 LLIYGPPNTG 436


>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69

Query: 1 ILLYGPPGTG 10
I++YGPP TG
Sbjct: 459 IVIYGPPNTG 468


>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51

Query: 1 ILLYGPPGTG 10
I++YGPP TG
Sbjct: 459 IVIYGPPNTG 468


>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26

Query: 1 ILLYGPPGTG 10
I++YGPP TG
Sbjct: 463 IVIYGPPNTG 472


>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b

Query: 1 ILLYGPPGTG 10
IL+YGPP +G
Sbjct: 430 ILIYGPPNSG 439


>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12

Query: 1 ILLYGPPGTG 10
IL+YGPP +G
Sbjct: 428 ILIYGPPNSG 437


>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5

Query: 1 ILLYGPPGTG 10
IL+YGPP +G
Sbjct: 430 ILIYGPPNSG 439


>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30

Query: 1 ILLYGPPGTG 10
++LYGPP TG
Sbjct: 455 LVLYGPPNTG 464


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 1 ILLYGPPGTG 10
++++GPPGTG
Sbjct: 1214 VMIHGPPGTG 1223


>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38

Query: 1 ILLYGPPGTG 10
+L+YGPP TG
Sbjct: 428 LLIYGPPDTG 437


>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23

Query: 1 ILLYGPPGTG 10
+L+YGPP TG
Sbjct: 431 LLIYGPPDTG 440


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 1 ILLYGPPGTG 10
++++GPPGTG
Sbjct: 1214 VMIHGPPGTG 1223


>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15

Query: 1 ILLYGPPGTG 10
+L+YGPP TG
Sbjct: 426 MLIYGPPDTG 435


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 1 ILLYGPPGTG 10
++++GPPGTG
Sbjct: 1210 VMIHGPPGTG 1219


Query: 1 ILLYGPPGTG 10
+L Y PPG G
Sbjct: 460 LLAYTPPGIG 469


>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48

Query: 1 ILLYGPPGTG 10
I++YGPP TG
Sbjct: 418 IVIYGPPDTG 427


>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34

Query: 1 ILLYGPPGTG 10
I++YGPP TG
Sbjct: 471 IVIYGPPDTG 480


>sp|YL872_MIMIV|UNCHARACTERIZED protein L872|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 ILLYGPPGTG 10
++LYGPP +G
Sbjct: 68 VILYGPPASG 77


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 1 ILLYGPPGTG 10
+ LYGPPGTG
Sbjct: 1444 VYLYGPPGTG 1453


>sp|VE1_MMPV1|REPLICATION protein E1|Macaca mulata papillomavirus 1 (Rhpv

Query: 1 ILLYGPPGTG 10
I+L+GPP TG
Sbjct: 449 IVLFGPPNTG 458


>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37

Query: 1 ILLYGPPGTG 10
+L YGPP TG
Sbjct: 433 LLFYGPPDTG 442


>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20

Query: 1 ILLYGPPGTG 10
IL++GPP TG
Sbjct: 429 ILIHGPPNTG 438


>sp|Y529_ATV|UNCHARACTERIZED protein ORF529|Acidianus two-tailed virus (ATV)

Query: 1 ILLYGPPGTG 10
ILLYG PG G
Sbjct: 112 ILLYGAPGMG 121


>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63

Query: 1 ILLYGPPGTG 10
+++YGPP TG
Sbjct: 442 LVIYGPPNTG 451


>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17

Query: 1 ILLYGPPGTG 10
IL++GPP TG
Sbjct: 433 ILIHGPPDTG 442


>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)

Query: 1 ILLYGPPGTG 10
+ LYGPPGTG
Sbjct: 1383 VYLYGPPGTG 1392


>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)

Query: 1 ILLYGPPGTG 10
+ LYGPPGTG
Sbjct: 1380 VYLYGPPGTG 1389


>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45

Query: 1 ILLYGPPGTG 10
ILLYGP TG
Sbjct: 466 ILLYGPANTG 475


>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47

Query: 1 ILLYGPPGTG 10
IL +GPP TG
Sbjct: 429 ILFHGPPNTG 438


>sp|POL1_RRVC|RNA1 polyprotein|Raspberry ringspot virus (strain cherry)

Query: 1 ILLYGPPGTG 10
+ +YGPPG G
Sbjct: 800 LYIYGPPGVG 809


>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human

Query: 1 ILLYGPPGTG 10
+L++GPP TG
Sbjct: 436 LLIFGPPNTG 445


>sp|VE1_MNPVA|REPLICATION protein E1|Mastomys natalensis papillomavirus (isolate African

Query: 1 ILLYGPPGTG 10
++ YGPP TG
Sbjct: 425 LVFYGPPNTG 434


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3 LYGPPGTG 10
L GPPGTG
Sbjct: 5604 LQGPPGTG 5611


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3 LYGPPGTG 10
L GPPGTG
Sbjct: 5581 LQGPPGTG 5588


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 3 LYGPPGTG 10
L GPPGTG
Sbjct: 5579 LQGPPGTG 5586


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 3 LYGPPGTG 10
L GPPGTG
Sbjct: 5575 LQGPPGTG 5582


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 3 LYGPPGTG 10
L GPPGTG
Sbjct: 5587 LQGPPGTG 5594


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 1 ILLYGPPGTG 10
I+++GPPG G
Sbjct: 1207 IVIHGPPGAG 1216


>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35

Query: 1 ILLYGPPGTG 10
IL+YG P TG
Sbjct: 459 ILIYGAPNTG 468


>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65

Query: 1 ILLYGPPGTG 10
I+++GPP TG
Sbjct: 423 IVIHGPPDTG 432


>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4

Query: 1 ILLYGPPGTG 10
I+++GPP TG
Sbjct: 424 IVIHGPPDTG 433


>sp|REP_BFDV|REPLICATION-ASSOCIATED protein|Beak and feather disease virus

Query: 2 LLYGPPGTG 10
++YGPPG G
Sbjct: 162 VIYGPPGCG 170


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1 ILLYGPPGTG 10
+ + GPPGTG
Sbjct: 5588 VTVQGPPGTG 5597


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 ILLYGPPGTG 10
+ + GPPGTG
Sbjct: 5679 VTVQGPPGTG 5688


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 ILLYGPPGTG 10
+ + GPPGTG
Sbjct: 5632 VTVQGPPGTG 5641


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 ILLYGPPGTG 10
+ + GPPGTG
Sbjct: 5639 VTVQGPPGTG 5648


>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9

Query: 1 ILLYGPPGTG 10
+L +GPP TG
Sbjct: 429 LLFHGPPDTG 438


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 2 LLYGPPGTG 10
+ GPPGTG
Sbjct: 5540 FVMGPPGTG 5548


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 2 LLYGPPGTG 10
+ GPPGTG
Sbjct: 5664 FVMGPPGTG 5672


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 5 GPPGTG 10
GPPGTG
Sbjct: 5669 GPPGTG 5674


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 5 GPPGTG 10
GPPGTG
Sbjct: 5663 GPPGTG 5668


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 5 GPPGTG 10
GPPGTG
Sbjct: 5611 GPPGTG 5616


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 5 GPPGTG 10
GPPGTG
Sbjct: 5578 GPPGTG 5583


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 5 GPPGTG 10
GPPGTG
Sbjct: 5616 GPPGTG 5621


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 5 GPPGTG 10
GPPGTG
Sbjct: 5636 GPPGTG 5641


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 5 GPPGTG 10
GPPGTG
Sbjct: 5666 GPPGTG 5671


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 5 GPPGTG 10
GPPGTG
Sbjct: 5578 GPPGTG 5583


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 5 GPPGTG 10
GPPGTG
Sbjct: 5578 GPPGTG 5583


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 5 GPPGTG 10
GPPGTG
Sbjct: 5578 GPPGTG 5583


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 5 GPPGTG 10
GPPGTG
Sbjct: 5578 GPPGTG 5583


>sp|POLG_SMSV1|GENOME polyprotein|San Miguel sea lion virus

Query: 1 ILLYGPPGTG 10
++L GPPG G
Sbjct: 586 VILTGPPGCG 595


>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)

Query: 3 LYGPPGTG 10
YGPP TG
Sbjct: 326 FYGPPSTG 333


>sp|NS1_ADVG|INITIATOR protein NS1|Aleutian mink disease parvovirus (strain

Query: 1 ILLYGPPGTG 10
I YGP GTG
Sbjct: 428 IWFYGPGGTG 437


>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)

Query: 3 LYGPPGTG 10
YGPP TG
Sbjct: 326 FYGPPSTG 333


>sp|VE1_CRPVK|REPLICATION protein E1|Cottontail rabbit papillomavirus (strain Kansas)

Query: 1 ILLYGPPGTG 10
++ YGPP +G
Sbjct: 427 MVFYGPPNSG 436


>sp|POLG_VESVA|GENOME polyprotein|Vesicular exanthema of swine virus

Query: 1 ILLYGPPGTG 10
++L GPPG G
Sbjct: 586 VILTGPPGCG 595


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 1 ILLYGPPGTG 10
+L++G PGTG
Sbjct: 1223 VLIHGSPGTG 1232


Query: 1 ILLYGPPGTG 10
++ Y PPG G
Sbjct: 466 LIAYTPPGVG 475


>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 2 LLYGPPGTG 10
+ GPPGTG
Sbjct: 5646 FIIGPPGTG 5654


>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 1 ILLYGPPGTG 10
I+L GPPG G
Sbjct: 477 IILTGPPGIG 486


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 1 ILLYGPPGTG 10
+L Y PPG G
Sbjct: 461 LLAYSPPGAG 470


Query: 1 ILLYGPPGTG 10
+LL+G PG G
Sbjct: 1231 LLLHGSPGVG 1240


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 5 GPPGTG 10
GPPGTG
Sbjct: 5447 GPPGTG 5452


>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70

Query: 1 ILLYGPPGTG 10
I++ GPP TG
Sbjct: 475 IVIQGPPNTG 484


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 1 ILLYGPPGTG 10
+L Y PPG G
Sbjct: 461 LLAYSPPGAG 470


Query: 1 ILLYGPPGTG 10
+LL+G PG G
Sbjct: 1223 LLLHGSPGAG 1232


>sp|VE1_COPV6|REPLICATION protein E1|Canine oral papillomavirus (strain Y62)

Query: 1 ILLYGPPGTG 10
++ +GPP TG
Sbjct: 422 LVFWGPPNTG 431


>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /

Query: 1 ILLYGPPGTG 10
+L Y PPG G
Sbjct: 461 LLAYSPPGAG 470


Query: 1 ILLYGPPGTG 10
+LL+G PG G
Sbjct: 1223 LLLHGSPGAG 1232


>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42

Query: 1 ILLYGPPGTG 10
++L GPP TG
Sbjct: 467 LVLIGPPNTG 476


>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32

Query: 1 ILLYGPPGTG 10
++L GPP TG
Sbjct: 466 LVLIGPPNTG 475


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 1 ILLYGPPGTG 10
+L Y PPG G
Sbjct: 464 LLAYSPPGAG 473


Query: 1 ILLYGPPGTG 10
+LL+G PG G
Sbjct: 1227 LLLHGSPGAG 1236


>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39

Query: 1 ILLYGPPGTG 10
I++YGP TG
Sbjct: 470 IVIYGPANTG 479


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 1 ILLYGPPGTG 10
+L Y PPG G
Sbjct: 461 LLAYSPPGAG 470


Query: 1 ILLYGPPGTG 10
+LL+G PG G
Sbjct: 1224 LLLHGSPGAG 1233


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 1 ILLYGPPGTG 10
+L Y PPG G
Sbjct: 463 LLAYSPPGAG 472


Query: 1 ILLYGPPGTG 10
+LL+G PG G
Sbjct: 1222 LLLHGSPGAG 1231


>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52

Query: 1 ILLYGPPGTG 10
++LYGP TG
Sbjct: 469 LVLYGPANTG 478


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 1 ILLYGPPGTG 10
+L++G PGTG
Sbjct: 1257 MLIHGSPGTG 1266


Query: 1 ILLYGPPG 8
+L Y PPG
Sbjct: 470 LLSYSPPG 477


>sp|REP_HCYV5|REPLICATION-ASSOCIATED protein|Human associated cyclovirus 1 (isolate

Query: 4 YGPPGTG 10
+GPPG+G
Sbjct: 165 HGPPGSG 171


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 1 ILLYGPPGTG 10
I++ GPPG G
Sbjct: 556 IMMCGPPGIG 565


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 1 ILLYGPPGTG 10
+L++G PGTG
Sbjct: 1249 LLVHGSPGTG 1258


>sp|REP_PICV|REPLICATION-ASSOCIATED protein|Pigeon circovirus (PiCV) (Columbid circovirus)

Query: 1 ILLYGPPGTG 10
I++ GPPG G
Sbjct: 188 IVITGPPGCG 197


>sp|LONH_MIMIV|LON protease homolog|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 ILLYGPPGTG 10
I L GPPG G
Sbjct: 511 IGLVGPPGVG 520


>sp|POLG_SVDVU|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 1 ILLYGPPGTG 10
+L Y PPG G
Sbjct: 461 LLAYSPPGAG 470


Query: 1 ILLYGPPGTG 10
+LL+G PG G
Sbjct: 1225 LLLHGSPGAG 1234


>sp|POLG_FCVC6|GENOME polyprotein|Feline calicivirus (strain CFI/68 FIV)

Query: 2 LLYGPPGTG 10
+L GPPG G
Sbjct: 481 ILTGPPGCG 489


>sp|POLG_FCV|GENOME polyprotein|Feline calicivirus (FCV)

Query: 2 LLYGPPGTG 10
+L GPPG G
Sbjct: 481 ILTGPPGCG 489


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 1 ILLYGPPGTG 10
+L Y PPG G
Sbjct: 462 LLSYAPPGAG 471


Query: 1 ILLYGPPGTG 10
+LL+G PG G
Sbjct: 1224 LLLHGSPGAG 1233


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 1 ILLYGPPGTG 10
+L Y PPG G
Sbjct: 463 LLAYSPPGAG 472


Query: 1 ILLYGPPGTG 10
+LL+G PG G
Sbjct: 1225 LLLHGSPGAG 1234


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 1 ILLYGPPGTG 10
+L++G PGTG
Sbjct: 1252 LLVHGSPGTG 1261


>sp|POLG_FCVF9|GENOME polyprotein|Feline calicivirus (strain F9) (FCV)

Query: 2 LLYGPPGTG 10
+L GPPG G
Sbjct: 481 ILTGPPGCG 489


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 1 ILLYGPPGTG 10
+L++G PGTG
Sbjct: 1249 LLVHGSPGTG 1258


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 1 ILLYGPPGTG 10
+L++G PGTG
Sbjct: 1252 LLVHGSPGTG 1261


>sp|POLG_FCVF4|GENOME polyprotein|Feline calicivirus (strain Japanese F4)

Query: 2 LLYGPPGTG 10
+L GPPG G
Sbjct: 481 ILTGPPGCG 489


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 1 ILLYGPPGTG 10
+L Y PPG G
Sbjct: 461 LLAYSPPGAG 470


Query: 1 ILLYGPPGTG 10
+LL+G PG G
Sbjct: 1225 LLLHGSPGAG 1234


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 1 ILLYGPPGTG 10
I++ GPPG G
Sbjct: 557 IMMCGPPGIG 566


>sp|POLG_SVDVH|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 1 ILLYGPPGTG 10
+L Y PPG G
Sbjct: 461 LLAYSPPGAG 470


Query: 1 ILLYGPPGTG 10
+LL+G PG G
Sbjct: 1225 LLLHGSPGAG 1234


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 1 ILLYGPPGTG 10
+L Y PPG G
Sbjct: 463 LLAYSPPGAG 472


Query: 1 ILLYGPPGTG 10
+LL+G PG G
Sbjct: 1225 LLLHGSPGAG 1234


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 1 ILLYGPPGTG 10
+L++G PGTG
Sbjct: 1250 MLVHGSPGTG 1259


Query: 1 ILLYGPPG 8
+L Y PPG
Sbjct: 471 LLSYSPPG 478


>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60

Query: 1 ILLYGPPGTG 10
++ +GPP TG
Sbjct: 433 LVFWGPPDTG 442


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 1 ILLYGPPGTG 10
+L++G PGTG
Sbjct: 1250 LLVHGSPGTG 1259


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 1 ILLYGPPGTG 10
+L++G PGTG
Sbjct: 1250 LLVHGSPGTG 1259


>sp|POL_SINV3|POLYPROTEIN invicta virus 3 (SINV-3)

Query: 1 ILLYGPPGTG 10
+ LYG PG G
Sbjct: 616 VCLYGEPGQG 625


>sp|POLFS_SINV3|POLYPROTEIN-FSD invicta virus 3 (SINV-3)

Query: 1 ILLYGPPGTG 10
+ LYG PG G
Sbjct: 616 VCLYGEPGQG 625


>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66

Query: 1 ILLYGPPGTG 10
++L GPP TG
Sbjct: 454 LVLCGPPNTG 463


>sp|POLG_PYFV1|GENOME polyprotein|Parsnip yellow fleck virus (isolate

Query: 1 ILLYGPPGTG 10
+ LYG PG G
Sbjct: 1463 VSLYGSPGVG 1472


>sp|POLG_FCVUR|GENOME polyprotein|Feline calicivirus (strain Cat/United

Query: 2 LLYGPPGTG 10
+L GPPG G
Sbjct: 481 ILTGPPGCG 489


>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22

Query: 1 ILLYGPPGTG 10
+L+ GPP TG
Sbjct: 432 LLICGPPDTG 441


>sp|POLG_BOVEV|GENOME polyprotein|Bovine enterovirus (strain VG-5-27) (BEV)

Query: 2 LLYGPPGTG 10
L++G PGTG
Sbjct: 1215 LIHGSPGTG 1223


>sp|REP_AHEBV|REPLICATION-ASSOCIATED protein|Avon-Heathcote Estuary associated kieseladnavirus (AHEaBV)

Query: 1 ILLYGPPGTG 10
++LYG GTG
Sbjct: 268 VILYGAAGTG 277


>sp|RFCS3_MIMIV|PUTATIVE replication factor C small|Acanthamoeba polyphaga mimivirus

Query: 1 ILLYGPPGTG 10
+L +GP G+G
Sbjct: 53 LLFFGPSGSG 62


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 1 ILLYGPPGTG 10
+LL+G PG G
Sbjct: 1243 LLLHGSPGAG 1252


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 1 ILLYGPPGTG 10
+LL+G PG G
Sbjct: 1233 LLLHGSPGAG 1242


Query: 1 ILLYGPPG 8
+L Y PPG
Sbjct: 462 LLAYSPPG 469


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 1 ILLYGPPGTG 10
+LL+G PG G
Sbjct: 1241 LLLHGSPGAG 1250


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 1 ILLYGPPGTG 10
+LL+G PG G
Sbjct: 1236 LLLHGSPGAG 1245


Query: 1 ILLYGPPG 8
+L Y PPG
Sbjct: 463 LLAYSPPG 470


>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote

Query: 2 LLYGPPGTG 10
+++G PGTG
Sbjct: 3940 IMFGGPGTG 3948


>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31

Query: 1 ILLYGPPGTG 10
IL++G P TG
Sbjct: 453 ILIHGAPNTG 462


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 3 LYGPPGTG 10
+ GPPG+G
Sbjct: 5308 IQGPPGSG 5315


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 3 LYGPPGTG 10
+ GPPG+G
Sbjct: 5233 IQGPPGSG 5240


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 3 LYGPPGTG 10
+ GPPG+G
Sbjct: 5208 IQGPPGSG 5215


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 3 LYGPPGTG 10
+ GPPG+G
Sbjct: 5251 IQGPPGSG 5258


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3 LYGPPGTG 10
+ GPPG+G
Sbjct: 5276 IQGPPGSG 5283


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 3 LYGPPGTG 10
+ GPPG+G
Sbjct: 5319 IQGPPGSG 5326


>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)

Query: 1 ILLYGPPGTG 10
+LL+G PG G
Sbjct: 1234 LLLHGSPGAG 1243


Query: 1 ILLYGPPGTG 10
++ Y PPG G
Sbjct: 461 LIAYSPPGAG 470


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 1 ILLYGPPGTG 10
+LL+G PG G
Sbjct: 1233 LLLHGSPGAG 1242


Query: 1 ILLYGPPG 8
+L Y PPG
Sbjct: 461 LLAYSPPG 468


>sp|RDRP_NCBVS|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Nudaurelia capensis beta virus (isolate

Query: 5 GPPGTG 10
GPPG+G
Sbjct: 566 GPPGSG 571


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 5 GPPGTG 10
GPPG+G
Sbjct: 5152 GPPGSG 5157


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 5 GPPGTG 10
GPPG+G
Sbjct: 5150 GPPGSG 5155


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 5 GPPGTG 10
GPPG+G
Sbjct: 5150 GPPGSG 5155


>sp|NS1_PAVBP|INITIATOR protein NS1|Bovine parvovirus 1 (BPV-1)

Query: 2 LLYGPPGTG 10
L YGP TG
Sbjct: 441 LFYGPASTG 449


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 1 ILLYGPPGTG 10
+LL+G PG G
Sbjct: 1235 LLLHGSPGAG 1244


Query: 1 ILLYGPPG 8
+L Y PPG
Sbjct: 462 LLAYAPPG 469


>sp|POLG_HED68|GENOME polyprotein|Human enterovirus D68 (EV68) (EV-68)

Query: 1 ILLYGPPGTG 10
++++G PGTG
Sbjct: 1232 LIIHGSPGTG 1241


Query: 1 ILLYGPPG 8
IL Y PPG
Sbjct: 447 ILCYTPPG 454


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 1 ILLYGPPGTG 10
++++G PGTG
Sbjct: 1238 LIIHGSPGTG 1247


>sp|VE1_BPV6|REPLICATION protein E1|Bos taurus papillomavirus 6 (Bovine

Query: 1 ILLYGPPGTG 10
+++ GPP TG
Sbjct: 434 LVIVGPPNTG 443


>sp|VE1_BPV3|REPLICATION protein E1|Bovine papillomavirus type 3

Query: 1 ILLYGPPGTG 10
+++ GPP TG
Sbjct: 438 LVIVGPPNTG 447


>sp|PKG1_ADEG1|PACKAGING protein 1|Fowl adenovirus A serotype 1

Query: 2 LLYGPPGTG 10
++YGP G+G
Sbjct: 148 VIYGPTGSG 156


>sp|RDRP_HASV|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Helicoverpa armigera stunt virus (HaSV)

Query: 5 GPPGTG 10
GPPG+G
Sbjct: 609 GPPGSG 614


>sp|009L_FRG3G|PUTATIVE helicase 009L|Frog virus 3 (isolate Goorha)

Query: 1 ILLYGPPGTG 10
+LL+ PGTG
Sbjct: 73 LLLFHAPGTG 82


>sp|CFXQ_MIMIV|PUTATIVE cfxQ-like protein R730|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 LLYGPPGTG 10
++ GPPG G
Sbjct: 170 VIQGPPGVG 178


>sp|PKG1_ADES1|PACKAGING protein 1|Snake adenovirus serotype 1 (SnAdV-1)

Query: 1 ILLYGPPGTG 10
+ +YGP G+G
Sbjct: 165 VTVYGPTGSG 174


>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40

Query: 1 ILLYGPPGTG 10
I + GPP TG
Sbjct: 473 ICIVGPPDTG 482


>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7

Query: 1 ILLYGPPGTG 10
I + GPP TG
Sbjct: 472 ICIVGPPDTG 481


>sp|CATV_NPVBM|VIRAL cathepsin|Bombyx mori nuclear polyhedrosis virus

Query: 1 ILLYGPPGTG 10
ILL PPG G
Sbjct: 103 ILLDQPPGKG 112


>sp|VF354_ASFWA|UNCHARACTERIZED protein B354L|African swine fever virus (isolate

Query: 2 LLYGPPGTG 10
+LYGP TG
Sbjct: 27 VLYGPSKTG 35


>sp|VF354_ASFP4|UNCHARACTERIZED protein B354L|African swine fever virus (isolate

Query: 2 LLYGPPGTG 10
+LYGP TG
Sbjct: 27 VLYGPSKTG 35


>sp|VF354_ASFM2|UNCHARACTERIZED protein B354L|African swine fever virus (isolate

Query: 2 LLYGPPGTG 10
+LYGP TG
Sbjct: 27 VLYGPSKTG 35


>sp|VF354_ASFK5|UNCHARACTERIZED protein B354L|African swine fever virus (isolate

Query: 2 LLYGPPGTG 10
+LYGP TG
Sbjct: 27 VLYGPSKTG 35


>sp|VF354_ASFB7|UNCHARACTERIZED protein B354L|African swine fever virus (strain

Query: 2 LLYGPPGTG 10
+LYGP TG
Sbjct: 27 VLYGPSKTG 35


>sp|VE1_PCPVC|REPLICATION protein E1|Pygmy chimpanzee papillomavirus type 1C

Query: 1 ILLYGPPGTG 10
I + GPP TG
Sbjct: 473 IAIVGPPDTG 482


>sp|VE1_PCPV1|REPLICATION protein E1|Pygmy chimpanzee papillomavirus type 1

Query: 1 ILLYGPPGTG 10
I + GPP TG
Sbjct: 473 IAIVGPPDTG 482


>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b

Query: 1 ILLYGPPGTG 10
I + GPP TG
Sbjct: 474 IAIVGPPDTG 483


>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a

Query: 1 ILLYGPPGTG 10
I + GPP TG
Sbjct: 474 IAIVGPPDTG 483


>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44

Query: 1 ILLYGPPGTG 10
I + GPP TG
Sbjct: 468 IAIVGPPDTG 477


>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13

Query: 1 ILLYGPPGTG 10
I + GPP TG
Sbjct: 471 IAIVGPPDTG 480


>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11

Query: 1 ILLYGPPGTG 10
I + GPP TG
Sbjct: 474 IAIVGPPDTG 483


>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16

Query: 1 ILLYGPPGTG 10
ILLYG TG
Sbjct: 473 ILLYGAANTG 482


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 1 ILLYGPPGT 9
IL Y PPGT
Sbjct: 459 ILAYTPPGT 467


Query: 1 ILLYGPPGTG 10
+L++G PG+G
Sbjct: 1224 VLIHGTPGSG 1233


>sp|NS1_PAVPN|INITIATOR protein NS1|Porcine parvovirus (strain NADL-2) (PPV)

Query: 1 ILLYGPPGTG 10
IL +GP TG
Sbjct: 394 ILFHGPASTG 403


>sp|NS1_PAVPK|INITIATOR protein NS1|Porcine parvovirus (strain Kresse) (PPV)

Query: 1 ILLYGPPGTG 10
IL +GP TG
Sbjct: 394 ILFHGPASTG 403


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 1 ILLYGPPGTG 10
+L++G PG+G
Sbjct: 1225 VLIHGTPGSG 1234


Query: 1 ILLYGPPG 8
IL Y PPG
Sbjct: 459 ILAYTPPG 466


>sp|PKG1_ADEM1|PACKAGING protein 1|Murine adenovirus A serotype 1

Query: 2 LLYGPPGTG 10
++YGP G+G
Sbjct: 165 IVYGPTGSG 173


>sp|VG67_BPML5|GENE 67 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 1 ILLYGPP 7
I LYGPP
Sbjct: 36 IELYGPP 42


>sp|LEF5_NPVOP|LATE expression factor 5|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 2 LLYGPPGT 9
LL+GP GT
Sbjct: 220 LLHGPSGT 227


>sp|MYC_AVIMH|VIRAL myc transforming protein|Avian retrovirus MH2

Query: 5 GPPGTG 10
GPPG G
Sbjct: 203 GPPGAG 208


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 1 ILLYGPPGTG 10
++ Y PPG G
Sbjct: 518 LIAYTPPGAG 527


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 1 ILLYGPPGTG 10
++ Y PPG G
Sbjct: 516 LIAYTPPGAG 525


>sp|POLG_BECNB|GENOME polyprotein|Bovine enteric calicivirus NB (isolate

Query: 1 ILLYGPPGTG 10
I+L GPPG G
Sbjct: 452 IVLCGPPGHG 461


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 1 ILLYGPPGTG 10
++ Y PPG G
Sbjct: 518 LIAYTPPGAG 527


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b

Query: 1 ILLYGPPGTG 10
++ Y PPG G
Sbjct: 518 LIAYTPPGAG 527


>sp|VE1_BPV4|REPLICATION protein E1|Bos taurus papillomavirus 4 (Bovine

Query: 1 ILLYGPPGTG 10
+++ GPP TG
Sbjct: 433 MVICGPPNTG 442


>sp|POLG_TMEVD|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 1 ILLYGPPGTG 10
++ Y PPG G
Sbjct: 540 LIAYTPPGAG 549


>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human

Query: 1 ILLYGPPGTG 10
I YGP TG
Sbjct: 419 ICFYGPASTG 428


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 1 ILLYGPPGTG 10
++ Y PPG G
Sbjct: 540 LISYTPPGAG 549


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 1 ILLYGPPGTG 10
++ Y PPG G
Sbjct: 518 LIAYTPPGAG 527


>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 1 ILLYGPPGTG 10
I +YG PG+G
Sbjct: 715 IGVYGVPGSG 724


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 ILLYGPPGTG 10
I +YG PG+G
Sbjct: 717 IGVYGVPGSG 726


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 ILLYGPPGTG 10
I +YG PG+G
Sbjct: 717 IGVYGVPGSG 726


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 ILLYGPPGTG 10
I +YG PG+G
Sbjct: 717 IGVYGVPGSG 726


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 ILLYGPPGTG 10
I +YG PG+G
Sbjct: 717 IGVYGVPGSG 726


>sp|POLN_EEVV|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (VEEV)

Query: 1 ILLYGPPGTG 10
I +YG PG+G
Sbjct: 717 IGVYGVPGSG 726


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1 ILLYGPPGTG 10
I +YG PG+G
Sbjct: 715 IGVYGVPGSG 724


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1 ILLYGPPGTG 10
I +YG PG+G
Sbjct: 715 IGVYGVPGSG 724


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1 ILLYGPPGTG 10
I +YG PG+G
Sbjct: 715 IGVYGVPGSG 724


>sp|REP_CPBDV|REPLICATION-ASSOCIATED protein|Chaetoceros protobacilladnavirus 2 (Chaetoceros sp

Query: 1 ILLYGPPGTG 10
I+ YG GTG
Sbjct: 273 IIFYGAGGTG 282


>sp|POLG_TMEVB|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 1 ILLYGPPGTG 10
++ Y PPG G
Sbjct: 540 LIAYTPPGAG 549


>sp|MYC_AVIME|VIRAL myc transforming protein|Avian retrovirus MH2E21

Query: 5 GPPGTG 10
GPPG G
Sbjct: 203 GPPGAG 208


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 3 LYGPPGTG 10
+YG PG+G
Sbjct: 717 VYGVPGSG 724


>sp|NS1_PAVL3|INITIATOR protein NS1|Parvovirus LuIII

Query: 1 ILLYGPPGTG 10
+L +GP TG
Sbjct: 395 VLFHGPASTG 404


>sp|NS1_PAVHH|INITIATOR protein NS1|Hamster parvovirus H1

Query: 1 ILLYGPPGTG 10
+L +GP TG
Sbjct: 395 VLFHGPASTG 404


>sp|NS1_PAVCN|INITIATOR protein NS1|Canine parvovirus type 2 (isolate

Query: 1 ILLYGPPGTG 10
+L +GP TG
Sbjct: 396 VLFHGPASTG 405


>sp|NS1_MUMIP|INITIATOR protein NS1|Murine minute virus (strain MVM

Query: 1 ILLYGPPGTG 10
+L +GP TG
Sbjct: 395 VLFHGPASTG 404


>sp|NS1_MUMIM|INITIATOR protein NS1|Murine minute virus (strain MVMi)

Query: 1 ILLYGPPGTG 10
+L +GP TG
Sbjct: 395 VLFHGPASTG 404


>sp|NS1_MEVA|INITIATOR protein NS1|Mink enteritis virus (strain Abashiri)

Query: 1 ILLYGPPGTG 10
+L +GP TG
Sbjct: 396 VLFHGPASTG 405


>sp|NS1_FPV19|INITIATOR protein NS1|Feline panleukopenia virus (strain 193)

Query: 1 ILLYGPPGTG 10
+L +GP TG
Sbjct: 396 VLFHGPASTG 405


>sp|NS1_FPV|INITIATOR protein NS1|Feline panleukopenia virus (FPV)

Query: 1 ILLYGPPGTG 10
+L +GP TG
Sbjct: 120 VLFHGPASTG 129


>sp|Y1940_ATV|PROTEIN ORF1940|Acidianus two-tailed virus (ATV)

Query: 6 PPGTG 10
PPGTG
Sbjct: 1550 PPGTG 1554


>sp|VP1_RRSVT|STRUCTURAL protein VP1|Rice ragged stunt virus (isolate

Query: 2 LLYGPPGTG 10
L++G P TG
Sbjct: 119 LMFGKPATG 127


>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human

Query: 1 ILLYGPPGTG 10
I YGP TG
Sbjct: 419 ICFYGPASTG 428


>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)

Query: 5 GPPGTG 10
GPPG G
Sbjct: 338 GPPGCG 343


>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant

Query: 5 GPPGTG 10
GPPG G
Sbjct: 338 GPPGCG 343


>sp|POLN_SAV2|POLYPROTEIN P1234|Alphavirus salmon subtype 2 (SAV2)

Query: 1 ILLYGPPGTG 10
I +YG PG G
Sbjct: 746 IGIYGVPGAG 755


>sp|POLN_SAV1|POLYPROTEIN P1234|Alphavirus salmon subtype 1 (SAV1)

Query: 1 ILLYGPPGTG 10
I +YG PG G
Sbjct: 747 IGIYGVPGAG 756


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 1 ILLYGPPGTG 10
+LL+G PG G
Sbjct: 1210 LLLHGNPGCG 1219


>sp|POLG_BECN1|GENOME polyprotein|Bovine enteric calicivirus Newbury agent-1

Query: 1 ILLYGPPGTG 10
++L GPPG G
Sbjct: 452 VVLCGPPGHG 461


>sp|P32_TRVPP|32 kDa protein|Tobacco rattle virus (isolate PpK20)

Query: 3 LYGPPG 8
YGPPG
Sbjct: 54 FYGPPG 59


>sp|REP_PCV1|REPLICATION-ASSOCIATED protein|Porcine circovirus 1 (PCV1)

Query: 2 LLYGPPGTG 10
++ GPPG G
Sbjct: 168 VIVGPPGCG 176


>sp|POLG_CACV4|GENOME polyprotein|Canine calicivirus (strain 48) (CaCV)

Query: 1 ILLYGPPGTG 10
I+L GP G G
Sbjct: 619 IILTGPAGCG 628


>sp|VE1_BPV1|REPLICATION protein E1|Bovine papillomavirus type 1

Query: 5 GPPGTG 10
GPP TG
Sbjct: 433 GPPNTG 438


>sp|RFCS2_MIMIV|PUTATIVE replication factor C small|Acanthamoeba polyphaga mimivirus

Query: 1 ILLYGPPGTG 10
I++ GP G+G
Sbjct: 37 IIISGPSGSG 46


>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)

Query: 5 GPPGTG 10
GPPG G
Sbjct: 338 GPPGCG 343


>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 LLYGPPGTG 10
+ GPPG+G
Sbjct: 3166 FIVGPPGSG 3174


>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 LLYGPPGTG 10
+ GPPG+G
Sbjct: 3183 FIVGPPGSG 3191


>sp|RPOA_EAVBU|REPLICASE polyprotein 1ab|Equine arteritis virus (strain Bucyrus)

Query: 5 GPPGTG 10
GPPG+G
Sbjct: 2528 GPPGSG 2533


Query: 4 YGPPGTG 10
Y PPG G
Sbjct: 262 YNPPGDG 268


>sp|PNKP_MIMIV|PUTATIVE bifunctional polynucleotide phosphatase/kinase|Acanthamoeba

Query: 1 ILLYGPPGTG 10
I++ G PG+G
Sbjct: 261 IVMIGQPGSG 270


>sp|REP_GOCV|REPLICATION-ASSOCIATED protein|Goose circovirus (GoCV)

Query: 1 ILLYGPPGTG 10
I+L G PG+G
Sbjct: 164 IVLIGRPGSG 173


>sp|VG11_SHV21|UNCHARACTERIZED gene 11 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 5 GPPGT 9
GPPGT
Sbjct: 80 GPPGT 84


>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)

Query: 5 GPPGTG 10
GPPG+G
Sbjct: 2897 GPPGSG 2902


>sp|POLG_TMEVG|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 2 LLYGPPGTG 10
+ Y PPG G
Sbjct: 541 IAYTPPGAG 549


>sp|REP_PCV2|REPLICATION-ASSOCIATED protein|Porcine circovirus 2 (PCV2)

Query: 2 LLYGPPGTG 10
++ GPPG G
Sbjct: 171 VIVGPPGCG 179


>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)

Query: 3 LYGPPG 8
++GPPG
Sbjct: 93 MFGPPG 98


>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great

Query: 3 LYGPPG 8
++GPPG
Sbjct: 93 MFGPPG 98


>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann

Query: 3 LYGPPG 8
++GPPG
Sbjct: 106 MFGPPG 111


>sp|YR776_MIMIV|UNCHARACTERIZED protein R776|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 ILLYGPPGTG 10
+LLYG G G
Sbjct: 204 MLLYGESGCG 213


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 1 ILLYGPPGTG 10
++ Y PPG G
Sbjct: 455 LIAYTPPGGG 464


Query: 1 ILLYGPPGTG 10
+++ G PGTG
Sbjct: 1236 LIIRGSPGTG 1245


>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human

Query: 1 ILLYGPPGTG 10
+ YGP TG
Sbjct: 419 VCFYGPASTG 428


>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)

Query: 3 LYGPPG 8
++GPPG
Sbjct: 93 MFGPPG 98


>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)

Query: 3 LYGPPG 8
++GPPG
Sbjct: 93 MFGPPG 98


>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)

Query: 3 LYGPPG 8
++GPPG
Sbjct: 93 MFGPPG 98


>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)

Query: 3 LYGPPG 8
++GPPG
Sbjct: 93 MFGPPG 98


>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)

Query: 3 LYGPPG 8
++GPPG
Sbjct: 93 MFGPPG 98


>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)

Query: 3 LYGPPG 8
++GPPG
Sbjct: 99 MFGPPG 104


>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 3 LYGPPG 8
++GPPG
Sbjct: 106 MFGPPG 111


>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)

Query: 3 LYGPPG 8
++GPPG
Sbjct: 99 MFGPPG 104


>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)

Query: 3 LYGPPG 8
++GPPG
Sbjct: 105 MFGPPG 110


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 1 ILLYGPPGTG 10
+++ G PGTG
Sbjct: 1236 LIIRGSPGTG 1245


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 1 ILLYGPPGTG 10
+++ G PGTG
Sbjct: 1236 LIIRGSPGTG 1245


>sp|PKG1_ADECC|PACKAGING protein 1|Canine adenovirus serotype 1 (strain

Query: 3 LYGPPGTG 10
+YGP G G
Sbjct: 168 VYGPTGCG 175


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 1 ILLYGPPGTG 10
++ Y PPG G
Sbjct: 462 LISYTPPGAG 471




50|Sequence|246|255|PPGTGKTLIA

>sp|LONH_MIMIV|LON protease homolog|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PPGTGKTLIA 10
PPG GKTL+A
Sbjct: 516 PPGVGKTLLA 525


>sp|YR476_MIMIV|PUTATIVE AAA family ATPase R476|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PPGTGKTLIA 10
PPGTGKT ++
Sbjct: 611 PPGTGKTSLS 620


>sp|RFCS4_MIMIV|PUTATIVE replication factor C small|Acanthamoeba polyphaga mimivirus

Query: 1 PPGTGKT 7
PPGTGKT
Sbjct: 48 PPGTGKT 54


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 1 PPGTGKT 7
PPGTGKT
Sbjct: 5544 PPGTGKT 5550


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 1 PPGTGKT 7
PPGTGKT
Sbjct: 5668 PPGTGKT 5674


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 1 PPGTGKTLIA 10
PPGTGK+ +A
Sbjct: 5670 PPGTGKSHLA 5679


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 PPGTGKTLIA 10
PPGTGK+ +A
Sbjct: 5664 PPGTGKSHLA 5673


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 1 PPGTGKTLIA 10
PPGTGK+ +A
Sbjct: 5612 PPGTGKSHLA 5621


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 PPGTGKTLIA 10
PPGTGK+ +A
Sbjct: 5579 PPGTGKSHLA 5588


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1 PPGTGKTLIA 10
PPGTGK+ +A
Sbjct: 5617 PPGTGKSHLA 5626


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1 PPGTGKTLIA 10
PPGTGK+ +A
Sbjct: 5637 PPGTGKSHLA 5646


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1 PPGTGKTLIA 10
PPGTGK+ +A
Sbjct: 5667 PPGTGKSHLA 5676


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 PPGTGKTLIA 10
PPGTGK+ +A
Sbjct: 5579 PPGTGKSHLA 5588


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 PPGTGKTLIA 10
PPGTGK+ +A
Sbjct: 5579 PPGTGKSHLA 5588


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 PPGTGKTLIA 10
PPGTGK+ +A
Sbjct: 5579 PPGTGKSHLA 5588


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 PPGTGKTLIA 10
PPGTGK+ +A
Sbjct: 5579 PPGTGKSHLA 5588


>sp|NS1_ADVG|INITIATOR protein NS1|Aleutian mink disease parvovirus (strain

Query: 1 PPGTGKTLIA 10
P GTGKTL+A
Sbjct: 433 PGGTGKTLLA 442


>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51

Query: 1 PPGTGKTLIA 10
PP TGK+L A
Sbjct: 464 PPNTGKSLFA 473


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 1 PPGTGKTLIA 10
PPGTGK+L+A
Sbjct: 1449 PPGTGKSLLA 1458


>sp|LOADL_BPT4|SLIDING-CLAMP-LOADER large subunit|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 PGTGKTLIA 10
PGTGKT +A
Sbjct: 52 PGTGKTTVA 60


>sp|LOADL_BPR69|SLIDING-CLAMP-LOADER large subunit|Escherichia phage RB69 (Bacteriophage RB69)

Query: 2 PGTGKTLIA 10
PGTGKT +A
Sbjct: 52 PGTGKTTVA 60


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 PPGTGKTLIA 10
PPGTGK+ A
Sbjct: 5607 PPGTGKSHFA 5616


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 PPGTGKTLIA 10
PPGTGK+ A
Sbjct: 5584 PPGTGKSHFA 5593


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1 PPGTGKTLIA 10
PPGTGK+ A
Sbjct: 5593 PPGTGKSHFA 5602


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 1 PPGTGKTLIA 10
PPGTGK+ A
Sbjct: 5582 PPGTGKSHFA 5591


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 PPGTGKTLIA 10
PPGTGK+ A
Sbjct: 5684 PPGTGKSHFA 5693


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 PPGTGKTLIA 10
PPGTGK+ A
Sbjct: 5637 PPGTGKSHFA 5646


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 1 PPGTGKTLIA 10
PPGTGK+ A
Sbjct: 5578 PPGTGKSHFA 5587


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 1 PPGTGKTLIA 10
PPGTGK+ A
Sbjct: 5590 PPGTGKSHFA 5599


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 PPGTGKTLIA 10
PPGTGK+ A
Sbjct: 5644 PPGTGKSHFA 5653


>sp|V51K_BPL79|51.5 kDa protein|Lactococcus phage (isolate 7-9) (Lactococcus

Query: 1 PPGTGKTLI 9
PPG+GK+++
Sbjct: 5 PPGSGKSVV 13


>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 1 PPGTGKT 7
PPGTGKT
Sbjct: 5650 PPGTGKT 5656


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 1 PPGTGKTL 8
PPGTGK++
Sbjct: 1219 PPGTGKSI 1226


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 PPGTGKT 7
PPGTGK+
Sbjct: 5448 PPGTGKS 5454


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 1 PPGTGKTL 8
PPGTGK++
Sbjct: 1219 PPGTGKSI 1226


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 1 PPGTGKTL 8
PPGTGK++
Sbjct: 1215 PPGTGKSI 1222


>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38

Query: 1 PPGTGKTLIA 10
PP TGK++ A
Sbjct: 433 PPDTGKSMFA 442


>sp|R1A_LIYV9|REPLICASE polyprotein 1a|Lettuce infectious yellows virus (isolate

Query: 1 PPGTGKT 7
PPG GKT
Sbjct: 1574 PPGAGKT 1580


>sp|R1AB_LIYV9|REPLICASE polyprotein 1ab|Lettuce infectious yellows virus (isolate

Query: 1 PPGTGKT 7
PPG GKT
Sbjct: 1574 PPGAGKT 1580


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 PPGTGKTLIA 10
PPG+GK+ A
Sbjct: 5153 PPGSGKSHFA 5162


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 PPGTGKTLIA 10
PPG+GK+ A
Sbjct: 5151 PPGSGKSHFA 5160


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 PPGTGKTLIA 10
PPG+GK+ A
Sbjct: 5151 PPGSGKSHFA 5160


>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)

Query: 1 PPGTGKTLIA 10
PP TGKT +A
Sbjct: 329 PPSTGKTNLA 338


>sp|VE1_BPV1|REPLICATION protein E1|Bovine papillomavirus type 1

Query: 1 PPGTGKTLI 9
PP TGK+++
Sbjct: 434 PPNTGKSML 442


>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)

Query: 1 PPGTGKTLIA 10
PP TGKT +A
Sbjct: 329 PPSTGKTNLA 338


>sp|Y007_SIFVH|PUTATIVE helicase 7|Sulfolobus islandicus filamentous virus (isolate

Query: 1 PPGTGKTLIA 10
P GTGK+ +A
Sbjct: 31 PTGTGKSFLA 40


>sp|POL1_RRVC|RNA1 polyprotein|Raspberry ringspot virus (strain cherry)

Query: 1 PPGTGKT 7
PPG GKT
Sbjct: 805 PPGVGKT 811


>sp|VE1_MNPVA|REPLICATION protein E1|Mastomys natalensis papillomavirus (isolate African

Query: 1 PPGTGKTL 8
PP TGK+L
Sbjct: 430 PPNTGKSL 437


>sp|POLG_FCVC6|GENOME polyprotein|Feline calicivirus (strain CFI/68 FIV)

Query: 1 PPGTGKTLIA 10
PPG GKT A
Sbjct: 485 PPGCGKTTAA 494


>sp|Y022_SIFVH|PUTATIVE helicase 22|Sulfolobus islandicus filamentous virus (isolate

Query: 1 PPGTGKTLIA 10
P G+GK++IA
Sbjct: 200 PTGSGKSVIA 209


>sp|POLG_FCVF9|GENOME polyprotein|Feline calicivirus (strain F9) (FCV)

Query: 1 PPGTGKTLIA 10
PPG GKT A
Sbjct: 485 PPGCGKTTAA 494


>sp|R1AB_BYVU|REPLICASE polyprotein 1ab|Beet yellows virus (isolate Ukraine)

Query: 1 PPGTGKT 7
PPG GKT
Sbjct: 2250 PPGGGKT 2256


>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 PPGTGKTLI 9
PPG GK+++
Sbjct: 339 PPGCGKSML 347


>sp|POLG_FCV|GENOME polyprotein|Feline calicivirus (FCV)

Query: 1 PPGTGKTLIA 10
PPG GKT A
Sbjct: 485 PPGCGKTTAA 494


>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65

Query: 1 PPGTGKTL 8
PP TGK+L
Sbjct: 428 PPDTGKSL 435


>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4

Query: 1 PPGTGKTL 8
PP TGK+L
Sbjct: 429 PPDTGKSL 436


>sp|VE1_BPV5|REPLICATION protein E1|Bovine papillomavirus type 5

Query: 1 PPGTGKTL 8
PP TGK+L
Sbjct: 453 PPDTGKSL 460


>sp|POLG_FCVF4|GENOME polyprotein|Feline calicivirus (strain Japanese F4)

Query: 1 PPGTGKTLIA 10
PPG GKT A
Sbjct: 485 PPGCGKTTAA 494


>sp|CFXQ_MIMIV|PUTATIVE cfxQ-like protein R730|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PPGTGKTLI 9
PPG GK+ +
Sbjct: 174 PPGVGKSYV 182


>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)

Query: 1 PPGTGKTLI 9
PPG GK+++
Sbjct: 339 PPGCGKSML 347


>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant

Query: 1 PPGTGKTLI 9
PPG GK+++
Sbjct: 339 PPGCGKSML 347


>sp|REP_HCYV5|REPLICATION-ASSOCIATED protein|Human associated cyclovirus 1 (isolate

Query: 1 PPGTGKT 7
PPG+GK+
Sbjct: 167 PPGSGKS 173


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 1 PPGTGKT 7
PPG+GK+
Sbjct: 5311 PPGSGKS 5317


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 1 PPGTGKT 7
PPG+GK+
Sbjct: 5236 PPGSGKS 5242


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 1 PPGTGKT 7
PPG+GK+
Sbjct: 5211 PPGSGKS 5217


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1 PPGTGKT 7
PPG+GK+
Sbjct: 5254 PPGSGKS 5260


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1 PPGTGKT 7
PPG+GK+
Sbjct: 5279 PPGSGKS 5285


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 PPGTGKT 7
PPG+GK+
Sbjct: 5322 PPGSGKS 5328


>sp|R1AB_GLRV3|REPLICASE polyprotein 1ab|Grapevine leafroll-associated virus 3 (isolate

Query: 1 PPGTGKT 7
PPG GKT
Sbjct: 1937 PPGGGKT 1943


>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8

Query: 1 PPGTGKTLIA 10
PP TGK+ A
Sbjct: 432 PPNTGKSTFA 441


>sp|POLG_FCVUR|GENOME polyprotein|Feline calicivirus (strain Cat/United

Query: 1 PPGTGKTLIA 10
PPG GKT A
Sbjct: 485 PPGCGKTTAA 494


>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66

Query: 1 PPGTGKTLIA 10
PP TGK+ A
Sbjct: 459 PPNTGKSCFA 468


>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30

Query: 1 PPGTGKTLIA 10
PP TGK+ A
Sbjct: 460 PPNTGKSCFA 469


>sp|RDRP_HASV|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Helicoverpa armigera stunt virus (HaSV)

Query: 1 PPGTGKT 7
PPG+GKT
Sbjct: 610 PPGSGKT 616


>sp|VE1_BPV2|REPLICATION protein E1|Bos taurus papillomavirus 2 (Bovine

Query: 1 PPGTGKTLI 9
PP TGK+++
Sbjct: 433 PPKTGKSML 441


>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 1 PPGTGKTLIA 10
PPG GKT +A
Sbjct: 482 PPGIGKTRLA 491


>sp|RPOA_EAVBU|REPLICASE polyprotein 1ab|Equine arteritis virus (strain Bucyrus)

Query: 1 PPGTGKTL 8
PPG+GKT
Sbjct: 2529 PPGSGKTF 2536


>sp|POLG_SMSV1|GENOME polyprotein|San Miguel sea lion virus

Query: 1 PPGTGKTLIA 10
PPG GKT A
Sbjct: 591 PPGCGKTTAA 600


>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60

Query: 1 PPGTGKTLI 9
PP TGK+ I
Sbjct: 438 PPDTGKSYI 446


>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22

Query: 1 PPGTGKTLIA 10
PP TGK++ +
Sbjct: 437 PPDTGKSMFS 446


>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63

Query: 1 PPGTGKTL 8
PP TGK++
Sbjct: 447 PPNTGKSM 454


>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human

Query: 1 PPGTGKTL 8
PP TGK++
Sbjct: 441 PPNTGKSM 448


>sp|VE1_COPV6|REPLICATION protein E1|Canine oral papillomavirus (strain Y62)

Query: 1 PPGTGKTL 8
PP TGK++
Sbjct: 427 PPNTGKSM 434


>sp|VE1_BPV6|REPLICATION protein E1|Bos taurus papillomavirus 6 (Bovine

Query: 1 PPGTGKTL 8
PP TGK++
Sbjct: 439 PPNTGKSM 446


>sp|VE1_BPV4|REPLICATION protein E1|Bos taurus papillomavirus 4 (Bovine

Query: 1 PPGTGKTL 8
PP TGK++
Sbjct: 438 PPNTGKSM 445


>sp|VE1_BPV3|REPLICATION protein E1|Bovine papillomavirus type 3

Query: 1 PPGTGKTL 8
PP TGK++
Sbjct: 443 PPNTGKSM 450


>sp|055L_FRG3G|PUTATIVE helicase 055L|Frog virus 3 (isolate Goorha)

Query: 1 PPGTGKTLIA 10
PPG GKT +A
Sbjct: 87 PPGFGKTFMA 96


>sp|POLG_VESVA|GENOME polyprotein|Vesicular exanthema of swine virus

Query: 1 PPGTGKTLIA 10
PPG GKT A
Sbjct: 591 PPGCGKTTAA 600


>sp|VE1_PAPVE|REPLICATION protein E1|European elk papillomavirus (EEPV)

Query: 1 PPGTGKTLI 9
PP +GK+L+
Sbjct: 439 PPNSGKSLL 447


>sp|YL712_MIMIV|UNCHARACTERIZED protein L712|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 PGTGKT 7
PGTGKT
Sbjct: 252 PGTGKT 257


>sp|009L_FRG3G|PUTATIVE helicase 009L|Frog virus 3 (isolate Goorha)

Query: 2 PGTGKT 7
PGTGKT
Sbjct: 79 PGTGKT 84


>sp|VF030_IIV6|UNCHARACTERIZED protein 030L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 PPGTGKTLI 9
P G GKTL+
Sbjct: 31 PAGAGKTLL 39


>sp|RDRP_NCBVS|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Nudaurelia capensis beta virus (isolate

Query: 1 PPGTGKTLIA 10
PPG+GK+ A
Sbjct: 567 PPGSGKSRAA 576


>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69

Query: 1 PPGTGKTLIA 10
PP TGK+ A
Sbjct: 464 PPNTGKSQFA 473


>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26

Query: 1 PPGTGKTLIA 10
PP TGK+ A
Sbjct: 468 PPNTGKSQFA 477


>sp|VE1_OVPVD|REPLICATION protein E1|Odocoileus virginianus papillomavirus 1 (DPV)

Query: 1 PPGTGKTLI 9
PP +GK+L+
Sbjct: 441 PPNSGKSLL 449


>sp|R1A_GLRV3|REPLICASE protein 1a|Grapevine leafroll-associated virus 3 (isolate

Query: 1 PPGTGKT 7
PPG GKT
Sbjct: 1937 PPGGGKT 1943


>sp|NTP1_CFEPV|NUCLEOSIDE triphosphatase I|Choristoneura fumiferana entomopoxvirus (CfEPV)

Query: 3 GTGKTLIA 10
GTGKTL A
Sbjct: 64 GTGKTLTA 71


>sp|NTP1_CBEPV|NUCLEOSIDE triphosphatase I|Choristoneura biennis entomopoxvirus (CbEPV)

Query: 3 GTGKTLIA 10
GTGKTL A
Sbjct: 64 GTGKTLTA 71


>sp|HELI1_TNAVC|PUTATIVE ATP-dependent RNA helicase|Trichoplusia ni ascovirus 2c (TnAV-2c)

Query: 3 GTGKTLIA 10
GTGKTL A
Sbjct: 83 GTGKTLTA 90


>sp|HELI1_HVAVE|PUTATIVE ATP-dependent RNA helicase|Heliothis virescens ascovirus 3e

Query: 3 GTGKTLIA 10
GTGKTL A
Sbjct: 82 GTGKTLTA 89


>sp|DDA_BPT4|ATP-DEPENDENT DNA helicase dda|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 PPGTGKTLI 9
P GTGKT +
Sbjct: 33 PAGTGKTTL 41


>sp|GAG_MMTVC|GAG polyprotein|Mouse mammary tumor virus (strain

Query: 1 PPGTGKTLIA 10
PPG KT++A
Sbjct: 407 PPGVKKTVLA 416


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 1 PPGTGKTL 8
PPG GK++
Sbjct: 1212 PPGAGKSI 1219


>sp|GAG_MMTVB|GAG polyprotein|Mouse mammary tumor virus (strain

Query: 1 PPGTGKTLIA 10
PPG KT++A
Sbjct: 407 PPGVKKTVLA 416


>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)

Query: 1 PPGTGKT 7
PPG+GKT
Sbjct: 2898 PPGSGKT 2904


>sp|VE1_PCPV1|REPLICATION protein E1|Pygmy chimpanzee papillomavirus type 1

Query: 1 PPGTGKTL 8
PP TGK++
Sbjct: 478 PPDTGKSM 485


>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48

Query: 1 PPGTGKTL 8
PP TGK++
Sbjct: 423 PPDTGKSM 430


>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37

Query: 1 PPGTGKTL 8
PP TGK++
Sbjct: 438 PPDTGKSM 445


>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23

Query: 1 PPGTGKTL 8
PP TGK++
Sbjct: 436 PPDTGKSM 443


>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17

Query: 1 PPGTGKTL 8
PP TGK++
Sbjct: 438 PPDTGKSM 445


>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15

Query: 1 PPGTGKTL 8
PP TGK++
Sbjct: 431 PPDTGKSM 438


>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9

Query: 1 PPGTGKTL 8
PP TGK++
Sbjct: 434 PPDTGKSM 441


>sp|G1P_BPPF3|PUTATIVE Gene 1 protein|Pseudomonas phage Pf3 (Bacteriophage Pf3)

Query: 2 PGTGKTLIA 10
PG+GKTL A
Sbjct: 9 PGSGKTLYA 17


>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 PPGTGKT 7
PPG+GKT
Sbjct: 3170 PPGSGKT 3176


>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 PPGTGKT 7
PPG+GKT
Sbjct: 3187 PPGSGKT 3193


>sp|POLG_RTSVA|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 2 PGTGKTLIA 10
PG GK+ IA
Sbjct: 1779 PGVGKSTIA 1787


>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 2 PGTGKTLIA 10
PG GK+ IA
Sbjct: 1776 PGVGKSTIA 1784


>sp|ETF1_YMTV5|EARLY transcription factor 70 kDa|Yaba monkey tumor virus (strain

Query: 3 GTGKTLIA 10
G+GKT+IA
Sbjct: 48 GSGKTIIA 55


>sp|ETF1_VARV|EARLY transcription factor 70 kDa|Variola virus

Query: 3 GTGKTLIA 10
G+GKT+IA
Sbjct: 48 GSGKTIIA 55


>sp|ETF1_VAR67|EARLY transcription factor 70 kDa|Variola virus (isolate

Query: 3 GTGKTLIA 10
G+GKT+IA
Sbjct: 48 GSGKTIIA 55


>sp|ETF1_VACCW|EARLY transcription factor 70 kDa|Vaccinia virus (strain Western

Query: 3 GTGKTLIA 10
G+GKT+IA
Sbjct: 48 GSGKTIIA 55


>sp|ETF1_VACCT|EARLY transcription factor 70 kDa|Vaccinia virus (strain Tian Tan)

Query: 3 GTGKTLIA 10
G+GKT+IA
Sbjct: 48 GSGKTIIA 55


>sp|ETF1_VACCC|EARLY transcription factor 70 kDa|Vaccinia virus (strain Copenhagen)

Query: 3 GTGKTLIA 10
G+GKT+IA
Sbjct: 48 GSGKTIIA 55


>sp|ETF1_VACCA|EARLY transcription factor 70 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 3 GTGKTLIA 10
G+GKT+IA
Sbjct: 48 GSGKTIIA 55


>sp|ETF1_RFVKA|EARLY transcription factor 70 kDa|Rabbit fibroma virus (strain Kasza)

Query: 3 GTGKTLIA 10
G+GKT+IA
Sbjct: 48 GSGKTIIA 55


>sp|ETF1_MYXVL|EARLY transcription factor 70 kDa|Myxoma virus (strain Lausanne) (MYXV)

Query: 3 GTGKTLIA 10
G+GKT+IA
Sbjct: 48 GSGKTIIA 55


>sp|ETF1_MONPV|EARLY transcription factor 70 kDa|Monkeypox virus (MPXV)

Query: 3 GTGKTLIA 10
G+GKT+IA
Sbjct: 48 GSGKTIIA 55


>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1

Query: 3 GTGKTLIA 10
G+GKT+IA
Sbjct: 48 GSGKTIIA 55


>sp|ETF1_FOWPN|EARLY transcription factor 70 kDa|Fowlpox virus (strain NVSL) (FPV)

Query: 3 GTGKTLIA 10
G+GKT+IA
Sbjct: 48 GSGKTIIA 55


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 1 PPGTGKTLIA 10
PPG GKT A
Sbjct: 561 PPGIGKTKAA 570


>sp|RDRP_BNYVS|REPLICASE necrotic yellow vein virus

Query: 2 PGTGKTLI 9
PGTGK+ +
Sbjct: 944 PGTGKSFL 951


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 1 PPGTGKTLIA 10
PPG GKT A
Sbjct: 562 PPGIGKTKAA 571


>sp|POL_MMTVC|GAG-PRO-POL polyprotein|Mouse mammary tumor virus (strain

Query: 1 PPGTGKTLIA 10
PPG KT++A
Sbjct: 407 PPGVKKTVLA 416


>sp|POL_MMTVB|GAG-PRO-POL polyprotein|Mouse mammary tumor virus (strain

Query: 1 PPGTGKTLIA 10
PPG KT++A
Sbjct: 407 PPGVKKTVLA 416


>sp|G1P_BPIKE|GENE 1 protein|Salmonella phage IKe (Bacteriophage IKe)

Query: 3 GTGKTLIA 10
G GKTL+A
Sbjct: 11 GAGKTLVA 18


>sp|G1P_BPI22|GENE 1 protein|Enterobacteria phage I2-2 (Bacteriophage I2-2)

Query: 3 GTGKTLIA 10
G GKTL+A
Sbjct: 11 GAGKTLVA 18


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 2 PGTGKTL 8
PGTGK+L
Sbjct: 1229 PGTGKSL 1235


Query: 1 PPGTGK 6
PPG GK
Sbjct: 471 PPGVGK 476


>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 PPGTGKTLI 9
PP TG T++
Sbjct: 123 PPPTGSTIV 131


>sp|VE1_MMPV1|REPLICATION protein E1|Macaca mulata papillomavirus 1 (Rhpv

Query: 1 PPGTGKT 7
PP TGK+
Sbjct: 454 PPNTGKS 460


>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70

Query: 1 PPGTGKT 7
PP TGK+
Sbjct: 480 PPNTGKS 486


>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47

Query: 1 PPGTGKT 7
PP TGK+
Sbjct: 434 PPNTGKS 440


>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42

Query: 1 PPGTGKT 7
PP TGK+
Sbjct: 472 PPNTGKS 478


>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32

Query: 1 PPGTGKT 7
PP TGK+
Sbjct: 471 PPNTGKS 477


>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25

Query: 1 PPGTGKT 7
PP TGK+
Sbjct: 433 PPNTGKS 439


>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24

Query: 1 PPGTGKT 7
PP TGK+
Sbjct: 436 PPNTGKS 442


>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21

Query: 1 PPGTGKT 7
PP TGK+
Sbjct: 432 PPNTGKS 438


>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20

Query: 1 PPGTGKT 7
PP TGK+
Sbjct: 434 PPNTGKS 440


>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19

Query: 1 PPGTGKT 7
PP TGK+
Sbjct: 433 PPNTGKS 439


>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14

Query: 1 PPGTGKT 7
PP TGK+
Sbjct: 434 PPNTGKS 440


>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)

Query: 1 PPGTGKTLI 9
PP TG T++
Sbjct: 123 PPPTGSTIV 131


>sp|PRO_MMTVC|GAG-PRO polyprotein|Mouse mammary tumor virus (strain

Query: 1 PPGTGKTLIA 10
PPG KT++A
Sbjct: 407 PPGVKKTVLA 416


>sp|G1P_BPIF1|GENE 1 protein|Escherichia phage If1 (Bacteriophage If1)

Query: 3 GTGKTLIA 10
G GKTL+A
Sbjct: 11 GAGKTLVA 18


>sp|PRO_MMTVB|GAG-PRO polyprotein|Mouse mammary tumor virus (strain

Query: 1 PPGTGKTLIA 10
PPG KT++A
Sbjct: 407 PPGVKKTVLA 416


>sp|ORF2_SPV1R|UNCHARACTERIZED protein ORF2|Spiroplasma virus SpV1-R8A2 B (SpV1)

Query: 3 GTGKTLI 9
GTGKTL+
Sbjct: 85 GTGKTLL 91


>sp|ORF2_SPV1C|UNCHARACTERIZED protein ORF2|Spiroplasma virus SpV1-C74 (SpV1)

Query: 3 GTGKTLI 9
GTGKTL+
Sbjct: 85 GTGKTLL 91


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 2 PGTGKTL 8
PGTGK+L
Sbjct: 1242 PGTGKSL 1248


>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 PPGTGKT 7
PPG GKT
Sbjct: 3264 PPGAGKT 3270


>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 PPGTGKT 7
PPG GKT
Sbjct: 3294 PPGAGKT 3300


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 2 PGTGKTL 8
PGTGK+L
Sbjct: 1242 PGTGKSL 1248


>sp|VF205_ASFP4|UNCHARACTERIZED protein K205R|African swine fever virus (isolate

Query: 1 PPGTGKT 7
PP +GKT
Sbjct: 122 PPASGKT 128


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 2 PGTGKTL 8
PGTGK+L
Sbjct: 1242 PGTGKSL 1248


>sp|GB_EHV1|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain HVS25A)

Query: 1 PPGTGKTLI 9
PP TG T++
Sbjct: 141 PPPTGSTVV 149


>sp|HELI1_SFAVA|PUTATIVE ATP-dependent RNA helicase|Spodoptera frugiperda ascovirus 1a

Query: 3 GTGKTLIA 10
GTGKT+ A
Sbjct: 110 GTGKTMTA 117


>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 PPGTGKT 7
PPG GKT
Sbjct: 3293 PPGAGKT 3299


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 2 PGTGKTL 8
PGTGK+L
Sbjct: 1242 PGTGKSL 1248


>sp|GB_EHV4|ENVELOPE glycoprotein B|Equine herpesvirus 4 (strain 1942)

Query: 1 PPGTGKTLI 9
PP TG T++
Sbjct: 82 PPPTGSTVV 90


>sp|VF205_ASFB7|UNCHARACTERIZED protein K205R|African swine fever virus (strain

Query: 1 PPGTGKT 7
PP +GKT
Sbjct: 122 PPASGKT 128


>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54

Query: 1 PPGTGKTLIA 10
PP TGK+ A
Sbjct: 461 PPDTGKSNFA 470


>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 PPGTGKT 7
PPG GKT
Sbjct: 3294 PPGAGKT 3300


>sp|VF050_IIV6|UNCHARACTERIZED protein 050L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 PPGTGKTLI 9
P G+GKT I
Sbjct: 29 PSGSGKTSI 37


>sp|GB_EHV1A|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain AB1)

Query: 1 PPGTGKTLI 9
PP TG T++
Sbjct: 141 PPPTGSTVV 149


>sp|LEAD_ADE05|I-LEADER protein|Human adenovirus C serotype 5

Query: 2 PGTGKTLI 9
P TG+TL+
Sbjct: 27 PATGRTLV 34


>sp|GB_EHV1V|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain V592)

Query: 1 PPGTGKTLI 9
PP TG T++
Sbjct: 141 PPPTGSTVV 149


>sp|GB_EHV1D|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain Kentucky

Query: 1 PPGTGKTLI 9
PP TG T++
Sbjct: 141 PPPTGSTVV 149


>sp|GB_EHV1B|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain Ab4p)

Query: 1 PPGTGKTLI 9
PP TG T++
Sbjct: 141 PPPTGSTVV 149


>sp|YR001_MIMIV|PUTATIVE replication origin-binding protein|Acanthamoeba polyphaga mimivirus

Query: 1 PPGTGKT 7
P GTGKT
Sbjct: 135 PMGTGKT 141


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 2 PGTGKTL 8
PGTGK+L
Sbjct: 1242 PGTGKSL 1248


>sp|REP_BFDV|REPLICATION-ASSOCIATED protein|Beak and feather disease virus

Query: 1 PPGTGKT 7
PPG GK+
Sbjct: 166 PPGCGKS 172


>sp|HEL10_BPT5|PROBABLE helicase D10|Escherichia phage T5 (Enterobacteria phage

Query: 2 PGTGKTLIA 10
PG GKT++A
Sbjct: 110 PGFGKTILA 118


>sp|POLG_PESV|GENOME polyprotein|Porcine enteric sapovirus (isolate Swine/United

Query: 1 PPGTGKT 7
PPG GKT
Sbjct: 465 PPGIGKT 471


>sp|TGB1_ASPVP|MOVEMENT and silencing protein TGBp1|Apple stem pitting virus (isolate

Query: 2 PGTGKTLI 9
PG+GKT +
Sbjct: 30 PGSGKTTL 37


>sp|LEAD_ADE02|I-LEADER protein|Human adenovirus C serotype 2

Query: 2 PGTGKTLI 9
P TG+TL+
Sbjct: 27 PATGRTLV 34


>sp|RPOA_LDVC|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 2 PGTGKT 7
PGTGKT
Sbjct: 3015 PGTGKT 3020


>sp|G1P_BPM13|GENE 1 protein|Enterobacteria phage M13 (Bacteriophage M13)

Query: 3 GTGKTLIA 10
G+GKTL++
Sbjct: 11 GSGKTLVS 18


>sp|G1P_BPFD|GENE 1 protein|Enterobacteria phage fd (Bacteriophage fd)

Query: 3 GTGKTLIA 10
G+GKTL++
Sbjct: 11 GSGKTLVS 18


>sp|G1P_BPF1|GENE 1 protein|Enterobacteria phage f1 (Bacteriophage f1)

Query: 3 GTGKTLIA 10
G+GKTL++
Sbjct: 11 GSGKTLVS 18


>sp|POLG_BECN1|GENOME polyprotein|Bovine enteric calicivirus Newbury agent-1

Query: 1 PPGTGKTLIA 10
PPG GK++ A
Sbjct: 457 PPGHGKSVAA 466


>sp|POLG_BECNB|GENOME polyprotein|Bovine enteric calicivirus NB (isolate

Query: 1 PPGTGKTLIA 10
PPG GK++ A
Sbjct: 457 PPGHGKSVAA 466


>sp|RDRP_PCVC|RNA-DIRECTED RNA polymerase|Penicillium chrysogenum virus (isolate

Query: 1 PPGTGKTLIA 10
P G GKT +A
Sbjct: 90 PSGCGKTSLA 99


>sp|REP_PICV|REPLICATION-ASSOCIATED protein|Pigeon circovirus (PiCV) (Columbid circovirus)

Query: 1 PPGTGKT 7
PPG GK+
Sbjct: 193 PPGCGKS 199


>sp|VG12_BPP22|REPLICATIVE DNA helicase|Salmonella phage P22 (Bacteriophage P22)

Query: 2 PGTGKTLIA 10
PG GKT +A
Sbjct: 197 PGMGKTELA 205


>sp|RPOA_LDVP|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 2 PGTGKT 7
PGTGKT
Sbjct: 2994 PGTGKT 2999


>sp|POLG_CACV4|GENOME polyprotein|Canine calicivirus (strain 48) (CaCV)

Query: 1 PPGTGKTLIA 10
P G GKT +A
Sbjct: 624 PAGCGKTTLA 633


>sp|Y425_AFV2P|UNCHARACTERIZED protein ORF425|Acidianus filamentous virus 2 (isolate

Query: 2 PGTGKTLIA 10
P TGKT A
Sbjct: 207 PNTGKTTFA 215


>sp|A565_VACCW|UNCHARACTERIZED protein A56.5|Vaccinia virus (strain Western Reserve)

Query: 1 PPGTGKTLIA 10
P G GKT IA
Sbjct: 13 PSGLGKTAIA 22


>sp|Y080_OSHVF|UNCHARACTERIZED protein ORF80|Ostreid herpesvirus 1 (isolate France)

Query: 2 PGTGKTLI 9
PGT +TL+
Sbjct: 9 PGTNQTLV 16


>sp|REP_PCV1|REPLICATION-ASSOCIATED protein|Porcine circovirus 1 (PCV1)

Query: 1 PPGTGKT 7
PPG GK+
Sbjct: 172 PPGCGKS 178


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 2 PGTGKTL 8
PGTGK++
Sbjct: 1263 PGTGKSI 1269


>sp|POLN_SAV1|POLYPROTEIN P1234|Alphavirus salmon subtype 1 (SAV1)

Query: 2 PGTGKTLI 9
PG GKT I
Sbjct: 753 PGAGKTAI 760


>sp|POLN_SAV2|POLYPROTEIN P1234|Alphavirus salmon subtype 2 (SAV2)

Query: 2 PGTGKTLI 9
PG GKT I
Sbjct: 752 PGAGKTAI 759


>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)

Query: 2 PGTGKTLI 9
PG GKT I
Sbjct: 1680 PGAGKTRI 1687




51|Sequence|251|260|KTLIARAVAN

***** No hits found ******


52|Sequence|256|265|RAVANETGAF

***** No hits found ******


53|Sequence|261|270|ETGAFFFLIN

>sp|Y274_AFV1Y|UNCHARACTERIZED protein ORF274|Acidianus filamentous virus 1 (isolate

Query: 1 ETGAFFFLIN 10
E GAF F+IN
Sbjct: 214 EVGAFQFMIN 223


>sp|YL794_MIMIV|UNCHARACTERIZED protein L794|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 GAFFFLIN 10
G FFLIN
Sbjct: 283 GKLFFLIN 290




54|Sequence|266|275|FFLINGPEIM

>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 FLINGPE 8
FLI+GPE
Sbjct: 628 FLIDGPE 634


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 FLINGPE 8
FLI+GPE
Sbjct: 908 FLIDGPE 914


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 FLINGPE 8
FLI+GPE
Sbjct: 908 FLIDGPE 914


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 FLINGPE 8
FLI+GPE
Sbjct: 908 FLIDGPE 914


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 FLINGPE 8
FLI+GPE
Sbjct: 908 FLIDGPE 914


>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 FLINGPE 8
FLI+GPE
Sbjct: 908 FLIDGPE 914


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 2 FLINGPE 8
FLI+GPE
Sbjct: 908 FLIDGPE 914


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 FLINGPE 8
FLI+GPE
Sbjct: 908 FLIDGPE 914


>sp|B277_SSV1|UNCHARACTERIZED protein B-277|Sulfolobus spindle-shape virus 1 (SSV1)

Query: 4 INGPEIM 10
INGP+IM
Sbjct: 188 INGPQIM 194


>sp|RP147_FOWPN|DNA-DIRECTED RNA polymerase 147 kDa|Fowlpox virus (strain NVSL) (FPV)

Query: 2 FLINGPEI 9
FLIN PEI
Sbjct: 506 FLINEPEI 513


>sp|POL_SRV2|GAG-PRO-POL polyprotein|Simian retrovirus SRV-2

Query: 2 FLINGPEI 9
F INGP+I
Sbjct: 1142 FQINGPKI 1149


>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 4 INGPEIM 10
+NGPEI+
Sbjct: 2096 LNGPEIL 2102


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 4 INGPEIM 10
+NGPEI+
Sbjct: 2096 MNGPEIL 2102


>sp|RPB2_IIV3|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 3

Query: 1 FFLINGPE 8
+F+ING E
Sbjct: 168 YFIINGKE 175




55|Sequence|271|280|GPEIMSKLAG

>sp|POLG_SPMMV|GENOME polyprotein|Sweet potato mild mottle virus

Query: 1 GPEIMSKLA 9
GP I+SK A
Sbjct: 2708 GPSILSKAA 2716


>sp|YOR2_COYMV|UNCHARACTERIZED 15 kDa protein|Commelina yellow mottle virus (CoYMV)

Query: 2 PEIMSKLA 9
PEI+SKL+
Sbjct: 87 PEIISKLS 94




56|Sequence|276|285|SKLAGESESN

>sp|POLG_FMDV1|GENOME polyprotein|Foot-and-mouth disease virus (strain A10/Holland/1961

Query: 2 KLAGESESN 10
KLAG+ ESN
Sbjct: 943 KLAGDVESN 951


>sp|POLG_FMDVS|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 KLAGESESN 10
KLAG+ ESN
Sbjct: 938 KLAGDVESN 946


>sp|POLG_FMDVZ|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 KLAGESESN 10
KLAG+ ESN
Sbjct: 944 KLAGDVESN 952


>sp|POLG_FMDVT|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 KLAGESESN 10
KLAG+ ESN
Sbjct: 938 KLAGDVESN 946


>sp|POLG_FMDVP|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 KLAGESESN 10
KLAG+ ESN
Sbjct: 943 KLAGDVESN 951


>sp|POLG_FMDVO|GENOME polyprotein|Foot-and-mouth disease virus serotype O

Query: 2 KLAGESESN 10
KLAG+ ESN
Sbjct: 943 KLAGDVESN 951


>sp|POLG_FMDV5|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 KLAGESESN 10
KLAG+ ESN
Sbjct: 943 KLAGDVESN 951


>sp|POLG_FMDVI|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 KLAGESESN 10
KLAG+ ESN
Sbjct: 939 KLAGDVESN 947


>sp|POLG_FMDS2|GENOME polyprotein|Foot-and-mouth disease virus serotype SAT-2

Query: 2 KLAGESESN 10
KLAG+ ESN
Sbjct: 947 KLAGDVESN 955


>sp|POLG_FMDVC|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 KLAGESESN 10
KLAG+ ESN
Sbjct: 944 KLAGDVESN 952


>sp|POLG_FMDVA|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 2 KLAGESESN 10
KLAG+ ESN
Sbjct: 944 KLAGDVESN 952


>sp|POLG_FMDA1|GENOME polyprotein|Foot-and-mouth disease virus serotype Asia-1

Query: 2 KLAGESESN 10
KLAG+ ESN
Sbjct: 940 KLAGDVESN 948


>sp|Y529_ATV|UNCHARACTERIZED protein ORF529|Acidianus two-tailed virus (ATV)

Query: 1 SKLAGESESN 10
SK GESE N
Sbjct: 147 SKYLGESEQN 156




57|Sequence|281|290|ESESNLRKAF

>sp|CAPSD_BPPSP|MAJOR capsid protein|Staphylococcus phage S13'

Query: 2 SESNLRKA 9
SESN+RKA
Sbjct: 184 SESNVRKA 191




58|Sequence|286|295|LRKAFEEAEK

>sp|YR653_MIMIV|UNCHARACTERIZED protein R653|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 LRKAFEEAEK 10
LRK+FE ++K
Sbjct: 60 LRKSFELSQK 69


>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)

Query: 1 LRKAFEEAE 9
LR++ EEAE
Sbjct: 1725 LRRSLEEAE 1733


>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)

Query: 1 LRKAFEEAE 9
LR++ EEAE
Sbjct: 1755 LRRSLEEAE 1763




59|Sequence|291|300|EEAEKNAPAI

>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7

Query: 2 EAEKNAPAI 10
EAE NAP +
Sbjct: 122 EAEDNAPEV 130




60|Sequence|296|305|NAPAIIFIDE

>sp|Y529_ATV|UNCHARACTERIZED protein ORF529|Acidianus two-tailed virus (ATV)

Query: 1 NAPAIIFIDE 10
N P I+F+DE
Sbjct: 168 NLPTIVFMDE 177


>sp|422L_IIV6|UNCHARACTERIZED protein 422L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 NAPAIIF 7
NAP IIF
Sbjct: 192 NAPVIIF 198


>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV

Query: 2 APAIIFIDE 10
A A++F+DE
Sbjct: 347 ARAVVFLDE 355




61|Sequence|301|310|IFIDELDAIA

>sp|OBP_BPT5|PUTATIVE replication origin binding protein|Escherichia phage T5

Query: 1 IFIDELDAI 9
IFIDE DA+
Sbjct: 481 IFIDECDAV 489


>sp|CAPSD_TOBSV|CAPSID protein|Tobacco streak virus (strain WC)

Query: 3 IDELDAIA 10
IDELDA+A
Sbjct: 32 IDELDAMA 39


>sp|TERL_BPSPP|TERMINASE, large subunit|Bacillus phage SPP1 (Bacteriophage SPP1)

Query: 2 FIDELDAI 9
++DELDAI
Sbjct: 356 WLDELDAI 363


>sp|Y425_AFV2P|UNCHARACTERIZED protein ORF425|Acidianus filamentous virus 2 (isolate

Query: 1 IFIDELD 7
+FIDE+D
Sbjct: 254 VFIDEID 260


>sp|V233_FOWPN|PUTATIVE ankyrin repeat protein FPV233|Fowlpox virus (strain NVSL) (FPV)

Query: 2 FIDELDAI 9
FID +DAI
Sbjct: 374 FIDNIDAI 381




62|Sequence|306|315|LDAIAPKREK

>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1

Query: 1 LDAIAPKREK 10
LD +AP RE+
Sbjct: 224 LDVLAPARER 233


>sp|BP08_BPT4|BASEPLATE wedge protein gp8|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 LDAIAPKRE 9
LDA+ P+R+
Sbjct: 86 LDAVIPRRD 94




63|Sequence|311|320|PKREKTHGEV

>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961

Query: 3 REKTHGEV 10
REK+H EV
Sbjct: 41 REKSHPEV 48


>sp|POL1_TRSV|RNA1 polyprotein|Tobacco ringspot virus (TobRV) (TRSV)

Query: 4 EKTHGE 9
E+THGE
Sbjct: 1636 ERTHGE 1641




64|Sequence|316|325|THGEVERRIV

>sp|YR156_MIMIV|UNCHARACTERIZED protein R156|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 HGEVERRIV 10
HG+ ERRIV
Sbjct: 179 HGDSERRIV 187


>sp|PG148_VARV|DNA polymerase processivity factor component|Variola virus

Query: 1 THGEVERRIV 10
T GEV +RI+
Sbjct: 285 TRGEVIKRII 294


>sp|PG148_VAR67|DNA polymerase processivity factor component|Variola virus (isolate

Query: 1 THGEVERRIV 10
T GEV +RI+
Sbjct: 285 TRGEVIKRII 294


>sp|PG148_VACCW|DNA polymerase processivity factor component|Vaccinia virus (strain

Query: 1 THGEVERRIV 10
T GEV +RI+
Sbjct: 285 TRGEVIKRII 294


>sp|PG148_VACCC|DNA polymerase processivity factor component|Vaccinia virus (strain

Query: 1 THGEVERRIV 10
T GEV +RI+
Sbjct: 285 TRGEVIKRII 294


>sp|PG148_MONPV|DNA polymerase processivity factor component|Monkeypox virus (MPXV)

Query: 1 THGEVERRIV 10
T GEV +RI+
Sbjct: 285 TRGEVIKRII 294


>sp|A20_VACCA|DNA polymerase processivity factor component|Vaccinia virus (strain

Query: 1 THGEVERRIV 10
T GEV +RI+
Sbjct: 285 TRGEVIKRII 294


>sp|Y002_OSHVF|UNCHARACTERIZED protein ORF2|Ostreid herpesvirus 1 (isolate France)

Query: 1 THGEVERRIV 10
TH +VE R+V
Sbjct: 30 THSQVEDRVV 39


>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3 GEVERRIV 10
G VERR+V
Sbjct: 310 GRVERRLV 317


>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3 GEVERRIV 10
G VERR+V
Sbjct: 310 GRVERRLV 317


>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3 GEVERRIV 10
G VERR+V
Sbjct: 310 GRVERRLV 317




65|Sequence|321|330|ERRIVSQLLT

>sp|E1BS_ADEM1|E1B protein, small T-antigen|Murine adenovirus A serotype 1

Query: 1 ERRIVSQLLT 10
ERR VSQL T
Sbjct: 143 ERRWVSQLST 152


>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 RRIVSQLLT 10
RR++SQ LT
Sbjct: 774 RRLISQSLT 782


>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 RRIVSQLLT 10
RR++SQ LT
Sbjct: 783 RRLISQSLT 791




66|Sequence|326|335|SQLLTLMDGL

>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41

Query: 1 SQLLTLMDG 9
SQLLT DG
Sbjct: 334 SQLLTCADG 342


>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40

Query: 1 SQLLTLMDG 9
SQLLT DG
Sbjct: 338 SQLLTCADG 346




67|Sequence|331|340|LMDGLKQRAH

>sp|ENV_MMTVC|ENVELOPE glycoprotein gp70|Mouse mammary tumor virus (strain

Query: 1 LMDGLKQRAH 10
L+DG KQRAH
Sbjct: 16 LLDGKKQRAH 25




68|Sequence|336|345|KQRAHVIVMA

>sp|NIFSL_ASFM2|NIFS-LIKE protein|African swine fever virus (isolate

Query: 1 KQRAHVIVMA 10
+QR HVI+ A
Sbjct: 78 RQRPHVIIGA 87


>sp|NIFSL_ASFWA|NIFS-LIKE protein|African swine fever virus (isolate

Query: 1 KQRAHVIVMA 10
+QR HVI+ A
Sbjct: 78 RQRPHVIIGA 87


>sp|PTPN2_MDBVW|TYROSINE phosphatase-like protein N2|Microplitis demolitor bracovirus

Query: 1 KQRAHVIVM 9
+Q +HVIVM
Sbjct: 18 QQHSHVIVM 26




69|Sequence|341|350|VIVMAATNRP

>sp|YR818_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R818|Acanthamoeba

Query: 1 VIVMAATNRP 10
V+ MAA+ RP
Sbjct: 851 VLFMAASTRP 860


>sp|NCAP_BDVV|NUCLEOPROTEIN disease virus (strain V)

Query: 3 VMAATNRP 10
+MAA NRP
Sbjct: 169 MMAALNRP 176


>sp|NCAP_BDV1|NUCLEOPROTEIN disease virus 1 (BoDV-1)

Query: 3 VMAATNRP 10
+MAA NRP
Sbjct: 169 MMAALNRP 176




70|Sequence|346|355|ATNRPNSIDP

>sp|023R_FRG3G|UNCHARACTERIZED protein 023R|Frog virus 3 (isolate Goorha)

Query: 5 PNSIDP 10
PNSIDP
Sbjct: 74 PNSIDP 79


>sp|VG56_ICHVA|UNCHARACTERIZED protein ORF56|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 NRPNSIDP 10
NRP+ +DP
Sbjct: 836 NRPHMLDP 843


>sp|VP54_CPSVP|UNCHARACTERIZED 54 kDa protein|Citrus psorosis virus (isolate Spain/P-121)

Query: 1 ATNRPNSI 8
A NRPN I
Sbjct: 228 AVNRPNDI 235


>sp|TRAP_TYCSV|TRANSCRIPTIONAL activator protein|Tomato yellow leaf curl Sardinia

Query: 2 TNRPNSIDP 10
TN PN I P
Sbjct: 95 TNIPNQIQP 103




71|Sequence|351|360|NSIDPALRRF

>sp|NEC1_EBVB9|NUCLEAR egress protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4 DPALRRF 10
DPALRR
Sbjct: 18 DPALRRL 24


>sp|NEC1_EBVA8|NUCLEAR egress protein 1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4 DPALRRF 10
DPALRR
Sbjct: 18 DPALRRL 24


>sp|PB2_QRFVE|POLYMERASE basic protein 2|Quaranfil virus (isolate

Query: 1 NSIDPALR 8
NS+DP +R
Sbjct: 230 NSLDPKMR 237




72|Sequence|356|365|ALRRFGRFDR

>sp|TEG1_EHV4|TEGUMENT protein UL46 homolog|Equine herpesvirus 4 (strain 1942)

Query: 1 ALRRFGRFD 9
ALR GRFD
Sbjct: 352 ALRNQGRFD 360


>sp|TEG1_EHV1B|TEGUMENT protein UL46 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 1 ALRRFGRFD 9
ALR GRFD
Sbjct: 352 ALRSQGRFD 360


>sp|TEG1_EHV1V|TEGUMENT protein UL46 homolog|Equine herpesvirus 1 (strain V592)

Query: 1 ALRRFGRFD 9
ALR GRFD
Sbjct: 352 ALRSQGRFD 360


>sp|Y066_NPVLD|UNCHARACTERIZED protein in POL 5'region|Lymantria dispar multicapsid nuclear

Query: 1 ALRRFGRFD 9
ALRR RFD
Sbjct: 358 ALRRPARFD 366




73|Sequence|361|370|GRFDREVDIG

>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 GRFDREVDIG 10
GRF+R DIG
Sbjct: 6323 GRFERVYDIG 6332


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 GRFDREVDIG 10
G+FD+ DIG
Sbjct: 6283 GKFDKIYDIG 6292


>sp|PORTL_BPN4|PROBABLE portal protein|Enterobacteria phage N4 (Bacteriophage N4)

Query: 1 GRFDREVDI 9
G FD EVDI
Sbjct: 551 GNFDLEVDI 559


>sp|PORTL_BPAPS|PORTAL protein|Acyrthosiphon pisum secondary endosymbiont phage

Query: 1 GRFDREVDIG 10
GR+D VD+G
Sbjct: 523 GRYDVTVDVG 532


>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)

Query: 2 RFDREV 7
RFDREV
Sbjct: 48 RFDREV 53


>sp|YL702_MIMIV|UNCHARACTERIZED protein L702|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 FDREVDI 9
FD+E+DI
Sbjct: 624 FDKEIDI 630


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1 GRFDREVDIG 10
G FD+ DIG
Sbjct: 6232 GSFDKVYDIG 6241


>sp|Y023_NPVOP|UNCHARACTERIZED 73.1 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 GRFDREVDI 9
GR+ R++D+
Sbjct: 397 GRYARDIDV 405


>sp|POLG_MDMV|GENOME polyprotein|Maize dwarf mosaic virus (MDMV)

Query: 1 GRFDREVDIG 10
G+ DR+VD G
Sbjct: 140 GQRDRDVDAG 149




74|Sequence|366|375|EVDIGIPDAT

>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 1 EVDIGIP 7
EVDIG+P
Sbjct: 378 EVDIGVP 384


>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)

Query: 1 EVDIGIPD 8
+VD+G+PD
Sbjct: 448 DVDLGLPD 455


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1 EVDIGIPDA 9
E+D+GIP A
Sbjct: 1195 ELDLGIPAA 1203


>sp|YL137_MIMIV|UNCHARACTERIZED protein L137|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 DIGIPDAT 10
D+ IPD+T
Sbjct: 437 DLNIPDST 444


>sp|RDRP_GLVWB|PROBABLE RNA-directed RNA polymerase|Giardia lamblia virus (isolate Wang)

Query: 1 EVDIGIP 7
E+DIG+P
Sbjct: 1648 ELDIGLP 1654


>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72

Query: 1 EVDIGIPDA 9
+VDIG P++
Sbjct: 139 QVDIGAPES 147




75|Sequence|371|380|IPDATGRLEI

>sp|VP91_NPVOP|CAPSID-ASSOCIATED protein Vp91|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 1 IPDATGRL 8
+PD TGRL
Sbjct: 334 LPDGTGRL 341


>sp|POLG_FMDVC|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 IPDATGRLE 9
+P ATGR+E
Sbjct: 22 LPRATGRME 30


>sp|YL488_MIMIV|UNCHARACTERIZED protein L488|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 IPDATGR 7
+PDA+GR
Sbjct: 115 VPDASGR 121


>sp|Z_IPPYV|RING finger protein Z|Ippy mammarenavirus (isolate Rat/Central African

Query: 1 IPDATG 6
IPDATG
Sbjct: 27 IPDATG 32


>sp|Y104_OSHVF|UNCHARACTERIZED protein ORF104|Ostreid herpesvirus 1 (isolate France)

Query: 1 IPDATGRL 8
IPDA G+L
Sbjct: 714 IPDAIGKL 721


>sp|CAPSD_MNV1|CAPSID protein VP1|Norovirus (isolate Mouse/NoV/United

Query: 2 PDATGRLEI 10
PD +G+LEI
Sbjct: 329 PDFSGQLEI 337


>sp|ANCHR_BPK34|ANCHOR protein|Klebsiella phage KP34 (Bacteriophage KP34)

Query: 1 IPDATG 6
+PDATG
Sbjct: 279 VPDATG 284




76|Sequence|376|385|GRLEILQIHT

>sp|YR476_MIMIV|PUTATIVE AAA family ATPase R476|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 GRLEILQIHT 10
GR++I QIHT
Sbjct: 753 GRVKIFQIHT 762


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 1 GRLEILQIH 9
G LE+L++H
Sbjct: 317 GCLEVLKVH 325




77|Sequence|381|390|LQIHTKNMKL

>sp|VS48_TBRVL|SATELLITE RNA 48 kDa protein|Tomato black ring virus (strain

Query: 1 LQIHTKNM 8
LQ+H KN+
Sbjct: 379 LQVHKKNV 386


>sp|VS48_BRSV|SATELLITE RNA 48 kDa protein|Beet ringspot virus (BRSV) (Tomato

Query: 1 LQIHTKNM 8
LQ+H KN+
Sbjct: 379 LQVHKKNV 386


>sp|VS48_TBRVS|SATELLITE RNA 48 kDa protein|Tomato black ring virus satellite

Query: 1 LQIHTKNM 8
LQ+H KN+
Sbjct: 374 LQVHKKNV 381


>sp|VS48_TBRVE|SATELLITE RNA 48 kDa protein|Tomato black ring virus (strain

Query: 1 LQIHTKNM 8
LQ+H KN+
Sbjct: 374 LQVHRKNV 381




78|Sequence|386|395|KNMKLADDVD

>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)

Query: 2 NMKLADDVD 10
N+K+A DVD
Sbjct: 465 NVKIAKDVD 473


>sp|POL2_BRAV|RNA2 polyprotein|Blackcurrant reversion association virus (BRAV)

Query: 4 KLADDVD 10
KLA+DVD
Sbjct: 926 KLAEDVD 932


>sp|YR815_MIMIV|PUTATIVE sel1-like repeat-containing protein R815|Acanthamoeba polyphaga

Query: 2 NMKLADDV 9
N+KL+DD+
Sbjct: 465 NVKLSDDI 472


>sp|V216_FOWPN|PUTATIVE ankyrin repeat protein FPV216|Fowlpox virus (strain NVSL) (FPV)

Query: 1 KNMKLADD 8
KN+KL DD
Sbjct: 235 KNIKLGDD 242




79|Sequence|391|400|ADDVDLEQVA

>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 2 DDVDLEQV 9
DD+D EQV
Sbjct: 1989 DDIDFEQV 1996


>sp|VL2_PAPVE|MINOR capsid protein L2|European elk papillomavirus (EEPV)

Query: 2 DDVDLEQVA 10
DDVDL+ +A
Sbjct: 376 DDVDLDSIA 384


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 2 DDVDLEQV 9
DD+D EQ+
Sbjct: 1989 DDIDFEQI 1996


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 2 DDVDLEQV 9
DD+D EQ+
Sbjct: 1989 DDIDFEQI 1996


>sp|DPOL_VARV|DNA polymerase|Variola virus

Query: 2 DDVDLEQV 9
DDVDL Q+
Sbjct: 435 DDVDLAQM 442


>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2 DDVDLEQV 9
DDVDL Q+
Sbjct: 435 DDVDLAQM 442


>sp|DPOL_VACCW|DNA polymerase|Vaccinia virus (strain Western Reserve)

Query: 2 DDVDLEQV 9
DDVDL Q+
Sbjct: 436 DDVDLAQM 443


>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 DDVDLEQV 9
DDVDL Q+
Sbjct: 436 DDVDLAQM 443


>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)

Query: 2 DDVDLEQV 9
DDVDL Q+
Sbjct: 436 DDVDLAQM 443


>sp|POLS_SAV3|STRUCTURAL polyprotein|Alphavirus salmon subtype 3 (SAV3)

Query: 1 ADDVDLEQVA 10
A+D+DLE A
Sbjct: 177 AEDMDLEAAA 186


>sp|POLS_SAV1|STRUCTURAL polyprotein|Alphavirus salmon subtype 1 (SAV1)

Query: 1 ADDVDLEQVA 10
A+D+DLE A
Sbjct: 178 AEDMDLEAAA 187




80|Sequence|396|405|LEQVANETHG

>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 QVANETHG 10
QV NET G
Sbjct: 430 QVGNETQG 437


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 QVANETHG 10
QV NET G
Sbjct: 430 QVGNETQG 437


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 QVANETHG 10
QV NET G
Sbjct: 430 QVGNETQG 437


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 QVANETHG 10
QV NET G
Sbjct: 430 QVGNETQG 437




81|Sequence|401|410|NETHGHVGAD

>sp|RDRP_WCMVO|RNA replication protein|White clover mosaic virus (strain

Query: 1 NETHGHVGA 9
+ETHGH A
Sbjct: 875 SETHGHSNA 883


>sp|RDRP_WCMVM|RNA replication protein|White clover mosaic virus (strain

Query: 1 NETHGHVGA 9
+ETHGH A
Sbjct: 875 SETHGHSNA 883


>sp|ENLYS_BPPA2|SAR-ENDOLYSIN phage PA-2 (Bacteriophage PA-2)

Query: 4 HGHVGAD 10
HGH G D
Sbjct: 53 HGHTGKD 59


>sp|ENLYS_BPP21|SAR-ENDOLYSIN phage P21 (Bacteriophage 21)

Query: 4 HGHVGAD 10
HGH G D
Sbjct: 53 HGHTGKD 59


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 2 ETHGHVGA 9
E+HG +GA
Sbjct: 440 ESHGKIGA 447


>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)

Query: 3 THGHVGA 9
TH HVGA
Sbjct: 401 THPHVGA 407


>sp|CAPSD_PASVK|CAPSID protein|Panicum streak virus (isolate Kenya)

Query: 2 ETHGHVGAD 10
ET+G +G+D
Sbjct: 166 ETNGRIGSD 174


>sp|L_LYCVW|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain WE)

Query: 2 ETHGH 6
ETHGH
Sbjct: 303 ETHGH 307


>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain

Query: 2 ETHGH 6
ETHGH
Sbjct: 303 ETHGH 307


>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)

Query: 3 THGHVGA 9
TH HVGA
Sbjct: 403 THPHVGA 409


>sp|G1P_BPPF3|PUTATIVE Gene 1 protein|Pseudomonas phage Pf3 (Bacteriophage Pf3)

Query: 2 ETHGHVGAD 10
ETH H G D
Sbjct: 94 ETHRHTGHD 102


>sp|MVP_CILVC|PUTATIVE movement protein|Citrus leprosis virus C (isolate

Query: 1 NETHGHVGAD 10
N HVGAD
Sbjct: 6 NNNSSHVGAD 15


>sp|MVP_PSBMV|P3N-PIPO polyprotein|Pea seed-borne mosaic virus (strain

Query: 3 THGHVG 8
THGH G
Sbjct: 344 THGHSG 349


>sp|LTP_GAHVM|LARGE tegument protein deneddylase|Gallid herpesvirus 2 (strain

Query: 4 HGHVG 8
HGH+G
Sbjct: 236 HGHIG 240


>sp|POLG_PSBMV|GENOME polyprotein|Pea seed-borne mosaic virus (strain

Query: 3 THGHVG 8
THGH G
Sbjct: 344 THGHSG 349


>sp|NEC2_HHV11|NUCLEAR egress protein 2|Human herpesvirus 1 (strain 17)

Query: 4 HGHVGAD 10
HGH G+D
Sbjct: 55 HGHDGSD 61


>sp|UL03_PSHV1|UNCHARACTERIZED protein UL3|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 ETHGHVG 8
E HGH G
Sbjct: 27 EKHGHAG 33




82|Sequence|406|415|HVGADLAALC

>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 HVGADLAALC 10
V DLAALC
Sbjct: 125 RVPTDLAALC 134


>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 HVGADLAALC 10
V DLAALC
Sbjct: 125 RVPTDLAALC 134


>sp|WHIB_BPMT4|PROBABLE transcriptional regulator WhiBTM4|Mycobacterium phage TM4

Query: 1 HVGADLAALC 10
H+G D +A+C
Sbjct: 4 HMGGDPSAIC 13


>sp|DNBI_SCMVC|MAJOR DNA-binding protein|Simian cytomegalovirus (strain Colburn)

Query: 5 DLAALC 10
DLAALC
Sbjct: 129 DLAALC 134




83|Sequence|411|420|LAALCSEAAL

>sp|REP_BPFD|REPLICATION-ASSOCIATED protein G2P|Enterobacteria phage fd (Bacteriophage fd)

Query: 3 ALCSEAAL 10
ALCSEA L
Sbjct: 111 ALCSEALL 118


>sp|REP_BPM13|REPLICATION-ASSOCIATED protein G2P|Enterobacteria phage M13 (Bacteriophage M13)

Query: 3 ALCSEAAL 10
ALCSEA L
Sbjct: 111 ALCSEALL 118


>sp|REP_BPF1|REPLICATION-ASSOCIATED protein G2P|Enterobacteria phage f1 (Bacteriophage f1)

Query: 3 ALCSEAAL 10
ALCSEA L
Sbjct: 111 ALCSEALL 118




84|Sequence|416|425|SEAALQAIRK

***** No hits found ******


85|Sequence|421|430|QAIRKKMDLI

***** No hits found ******


86|Sequence|426|435|KMDLIDLEDE

>sp|R1AB_BYVU|REPLICASE polyprotein 1ab|Beet yellows virus (isolate Ukraine)

Query: 3 DLIDLEDE 10
DLID +DE
Sbjct: 628 DLIDFKDE 635


>sp|RDRP_ASPVP|RNA replication polyprotein|Apple stem pitting virus (isolate

Query: 2 MDLIDLEDE 10
M ++DL+DE
Sbjct: 1009 MHIVDLDDE 1017


>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9

Query: 1 KMDLIDLEDE 10
++DL D EDE
Sbjct: 575 QLDLSDQEDE 584




87|Sequence|431|440|DLEDETIDAE

>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 2 LEDETIDA 9
L+DET+D+
Sbjct: 799 LKDETVDS 806


>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 1 DLEDETIDAE 10
++E ET++AE
Sbjct: 514 EIEKETVEAE 523




88|Sequence|436|445|TIDAEVMNSL

***** No hits found ******


89|Sequence|441|450|VMNSLAVTMD

***** No hits found ******


90|Sequence|446|455|AVTMDDFRWA

>sp|GP_PHV|ENVELOPMENT polyprotein|Prospect Hill virus (PHV)

Query: 3 TMDDFR 8
TMDDFR
Sbjct: 266 TMDDFR 271


>sp|VP2_POVBO|MINOR capsid protein VP2|Bovine polyomavirus (BPyV) (Bos taurus

Query: 3 TMDDFRWA 10
++D FRWA
Sbjct: 147 SIDPFRWA 154


>sp|Y016_HIS1I|UNCHARACTERIZED protein ORF16|His1 virus (isolate Australia/Victoria) (His1V)

Query: 2 VTMDDFRW 9
+T DDF W
Sbjct: 187 LTFDDFEW 194


>sp|RDRP_P1AMV|RNA replication protein|Plantago asiatica mosaic potexvirus (P1AMV)

Query: 1 AVTMDDFR 8
A T+DDF+
Sbjct: 948 ATTLDDFK 955


>sp|IBMP_CAMVW|TRANSACTIVATOR/VIROPLASMIN protein|Cauliflower mosaic virus (strain W260)

Query: 2 VTMDDF 7
+TMDDF
Sbjct: 247 ITMDDF 252


>sp|IBMP_CAMVS|TRANSACTIVATOR/VIROPLASMIN protein|Cauliflower mosaic virus (strain Strasbourg)

Query: 2 VTMDDF 7
+TMDDF
Sbjct: 247 ITMDDF 252


>sp|IBMP_CAMVP|TRANSACTIVATOR/VIROPLASMIN protein|Cauliflower mosaic virus (strain PV147)

Query: 2 VTMDDF 7
+TMDDF
Sbjct: 247 ITMDDF 252


>sp|IBMP_CAMVN|TRANSACTIVATOR/VIROPLASMIN protein|Cauliflower mosaic virus (strain NY8153)

Query: 2 VTMDDF 7
+TMDDF
Sbjct: 247 ITMDDF 252


>sp|IBMP_CAMVJ|TRANSACTIVATOR/VIROPLASMIN protein|Cauliflower mosaic virus (strain S-Japan)

Query: 2 VTMDDF 7
+TMDDF
Sbjct: 247 ITMDDF 252


>sp|IBMP_CAMVE|TRANSACTIVATOR/VIROPLASMIN protein|Cauliflower mosaic virus (strain BBC)

Query: 2 VTMDDF 7
+TMDDF
Sbjct: 247 ITMDDF 252


>sp|IBMP_CAMVD|TRANSACTIVATOR/VIROPLASMIN protein|Cauliflower mosaic virus (strain D/H)

Query: 2 VTMDDF 7
+TMDDF
Sbjct: 247 ITMDDF 252


>sp|IBMP_CAMVC|TRANSACTIVATOR/VIROPLASMIN protein|Cauliflower mosaic virus (strain CM-1841)

Query: 2 VTMDDF 7
+TMDDF
Sbjct: 247 ITMDDF 252


>sp|IBMP_CAMV4|TRANSACTIVATOR/VIROPLASMIN protein|Cauliflower mosaic virus (strain D4)

Query: 2 VTMDDF 7
+TMDDF
Sbjct: 247 ITMDDF 252


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 2 VTMDDFRW 9
V++DD+ W
Sbjct: 724 VSVDDYSW 731


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 3 TMDDFRW 9
T+DD+ W
Sbjct: 728 TVDDYNW 734


>sp|DPOL_CEV01|DNA polymerase|Chrysochromulina ericina virus (CeV01)

Query: 2 VTMDDFRW 9
+T D F+W
Sbjct: 819 ITYDTFKW 826


>sp|Y066_NPVOP|UNCHARACTERIZED 98.6 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 AVTMDDFRW 9
A+T D F+W
Sbjct: 841 AITEDIFKW 849


>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate

Query: 3 TMDDFRW 9
T D+F+W
Sbjct: 1205 TQDEFQW 1211


>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United

Query: 3 TMDDFRW 9
T D+F+W
Sbjct: 1205 TQDEFQW 1211




91|Sequence|451|460|DFRWALSQSN

>sp|GAG_FIVT2|GAG polyprotein|Feline immunodeficiency virus (isolate TM2)

Query: 1 DFRWALSQSN 10
+FRWA+ +N
Sbjct: 34 NFRWAIRMAN 43


>sp|GAG_FIVWO|GAG polyprotein|Feline immunodeficiency virus (isolate Wo)

Query: 1 DFRWALSQSN 10
+FRWA+ +N
Sbjct: 34 NFRWAIRMAN 43


>sp|GAG_FIVSD|GAG polyprotein|Feline immunodeficiency virus (strain San

Query: 1 DFRWALSQSN 10
+FRWA+ +N
Sbjct: 34 NFRWAIRMAN 43


>sp|GAG_FIVPE|GAG polyprotein|Feline immunodeficiency virus (isolate Petaluma)

Query: 1 DFRWALSQSN 10
+FRWA+ +N
Sbjct: 34 NFRWAIRMAN 43


>sp|MOTB_BPT4|TRANSCRIPTION regulatory protein motB|Enterobacteria phage T4 (Bacteriophage

Query: 1 DFRWALSQS 9
DF+W L Q+
Sbjct: 89 DFKWKLGQA 97


>sp|POLG_BECNB|GENOME polyprotein|Bovine enteric calicivirus NB (isolate

Query: 2 FRWALSQ 8
F WALSQ
Sbjct: 811 FTWALSQ 817


>sp|POLG_BECN1|GENOME polyprotein|Bovine enteric calicivirus Newbury agent-1

Query: 2 FRWALSQ 8
F WALSQ
Sbjct: 811 FTWALSQ 817


>sp|POLG_TRMVU|GENOME polyprotein|Triticum mosaic virus (isolate Triticum

Query: 4 WALSQS 9
WALSQS
Sbjct: 888 WALSQS 893


>sp|VG06_BPMD2|MINOR tail protein Gp6|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 DFRWAL 6
DFRW++
Sbjct: 20 DFRWSI 25


>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P

Query: 2 FRWALSQSN 10
F WA+ Q N
Sbjct: 148 FHWAVKQQN 156




92|Sequence|456|465|LSQSNPSALR

>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 2 SQSNPSALR 10
SQ+NPS L+
Sbjct: 859 SQNNPSVLQ 867


>sp|L_WWAVU|RNA-DIRECTED RNA polymerase L|Whitewater Arroyo mammarenavirus (isolate

Query: 1 LSQSNPSAL 9
LSQ NPS++
Sbjct: 33 LSQVNPSSI 41




93|Sequence|461|470|PSALRETVVE

***** No hits found ******


94|Sequence|466|475|ETVVEVPQVT

>sp|SPIKE_BCHK5|SPIKE glycoprotein|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 2 TVVEVPQVT 10
T++++PQVT
Sbjct: 869 TMLQIPQVT 877


>sp|POLG_PVCV2|GENOME polyprotein|Petunia vein clearing virus (isolate

Query: 2 TVVEVPQ 8
T+VE+PQ
Sbjct: 1200 TIVEIPQ 1206


>sp|POLG_PVCV1|GENOME polyprotein|Petunia vein clearing virus (isolate

Query: 2 TVVEVPQ 8
T+VE+PQ
Sbjct: 1199 TIVEIPQ 1205


>sp|FUS_ISAV8|FUSION glycoprotein F0|Infectious salmon anemia virus (isolate

Query: 1 ETVVEVPQVT 10
ET+ E PQ+T
Sbjct: 49 ETITERPQLT 58


>sp|TFA_BPP2|PROBABLE tail fiber assembly protein|Escherichia phage P2 (Bacteriophage

Query: 2 TVVEVPQVT 10
+VVEVP +T
Sbjct: 75 SVVEVPDIT 83


>sp|U1_BPP1|TAIL fiber assembly protein U|Escherichia phage P1 (Bacteriophage P1)

Query: 2 TVVEVPQVT 10
+VVEVP +T
Sbjct: 75 SVVEVPDIT 83




95|Sequence|471|480|VPQVTWEDIG

>sp|POL_KORV|GAG-POL polyprotein|Koala retrovirus (KoRV)

Query: 2 PQVTWED 8
PQVTWED
Sbjct: 629 PQVTWED 635


>sp|POL_WMSV|GAG-POL polyprotein|Woolly monkey sarcoma virus (WMSV)

Query: 2 PQVTWED 8
PQVTWED
Sbjct: 629 PQVTWED 635


>sp|ICP27_GAHVM|MRNA export factor ICP27 homolog|Gallid herpesvirus 2 (strain

Query: 2 PQVTWE 7
PQ+TWE
Sbjct: 270 PQITWE 275


>sp|BP07_BPT4|BASEPLATE wedge protein gp7|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 QVTWEDIG 10
QV W+D+G
Sbjct: 22 QVRWDDVG 29


>sp|DCTD_BPT2|DEOXYCYTIDYLATE deaminase|Enterobacteria phage T2 (Bacteriophage T2)

Query: 1 VPQVTWEDI 9
VP++ WE+I
Sbjct: 174 VPKLNWENI 182


>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 1 VPQVTWED 8
VP WED
Sbjct: 530 VPSTVWED 537


>sp|PORTL_BPN4|PROBABLE portal protein|Enterobacteria phage N4 (Bacteriophage N4)

Query: 1 VPQVTWEDI 9
V VTWED+
Sbjct: 103 VTPVTWEDV 111


>sp|YO10_BPL2|UNCHARACTERIZED 16.1 kDa protein|Acholeplasma phage L2 (Bacteriophage L2)

Query: 3 QVTWEDI 9
Q+TW+D+
Sbjct: 11 QITWQDM 17


>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)

Query: 1 VPQVTWE 7
VP+V WE
Sbjct: 1857 VPRVAWE 1863


>sp|ORF27_HHV8P|PROTEIN ORF27|Human herpesvirus 8 type P

Query: 4 VTWEDI 9
V+WEDI
Sbjct: 257 VSWEDI 262


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 VPQVTWEDI 9
P TWED+
Sbjct: 3318 TPVTTWEDV 3326


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 VPQVTWEDI 9
P TWED+
Sbjct: 3318 TPVTTWEDV 3326


>sp|POL2_SDVS5|RNA2 polyprotein|Satsuma dwarf virus (isolate Satsuma

Query: 4 VTWEDIG 10
V W+D+G
Sbjct: 1012 VVWDDLG 1018


>sp|Y1940_ATV|PROTEIN ORF1940|Acidianus two-tailed virus (ATV)

Query: 1 VPQVTWEDI 9
+ +TW+DI
Sbjct: 1833 ITPITWDDI 1841


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 VPQVTWEDI 9
P TWED+
Sbjct: 3318 TPITTWEDV 3326


>sp|POL_GALV|GAG-POL polyprotein|Gibbon ape leukemia virus (GALV)

Query: 2 PQVTW 6
PQVTW
Sbjct: 628 PQVTW 632


>sp|CAPSH_ADES1|HEXON protein|Snake adenovirus serotype 1 (SnAdV-1)

Query: 5 TWEDIG 10
TW DIG
Sbjct: 463 TWTDIG 468


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 VPQVTWED 8
P VTWE+
Sbjct: 1399 APDVTWEE 1406




96|Sequence|476|485|WEDIGGLEDV

>sp|RDRP_BPGA|RNA-DIRECTED RNA polymerase beta chain|Enterobacteria phage GA (Bacteriophage

Query: 1 WEDIGGLED 9
W+ +GG+ D
Sbjct: 416 WQTVGGMSD 424


>sp|043R_FRG3G|UNCHARACTERIZED protein 043R|Frog virus 3 (isolate Goorha)

Query: 1 WEDIGGLEDV 10
WED GGLE
Sbjct: 103 WEDRGGLEGC 112


Query: 1 WEDIGGLEDV 10
WED GGLE
Sbjct: 144 WEDRGGLEGC 153


>sp|RDRP_PCV87|REPLICASE large subunit|Peanut clump virus (isolate 87/TGTA2)

Query: 1 WEDIGGLEDV 10
+EDI L+DV
Sbjct: 1121 YEDISALKDV 1130


>sp|YL340_MIMIV|UNCHARACTERIZED protein L340|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 DIGGLEDV 10
DIG +EDV
Sbjct: 35 DIGDIEDV 42


>sp|TYSY_BPT4|THYMIDYLATE synthase|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 WEDIGGLEDV 10
W D GG++ +
Sbjct: 113 WRDFGGVDQI 122


>sp|NCAP_TIBVC|NUCLEOPROTEIN virus (strain CS132) (TIBV)

Query: 1 WEDIGGL 7
W+D GGL
Sbjct: 220 WKDCGGL 226


>sp|APYC1_BPBSP|ANTI-PYCSAR protein Apyc1|Bacillus phage BSP38

Query: 2 EDIGGLEDV 10
+ IGGLE+V
Sbjct: 68 DHIGGLEEV 76


>sp|ACPY1_BP010|ANTI-PYCSAR protein Apyc1|Bacillus phage 010DV004

Query: 2 EDIGGLEDV 10
+ IGGLE+V
Sbjct: 68 DHIGGLEEV 76


>sp|HFT_BPCA1|HEAD fiber trimeric protein|Bacteroides phage crAss001 (Bacteroides

Query: 1 WEDIGG 6
WE IGG
Sbjct: 34 WETIGG 39


>sp|G3P_BPPF3|ATTACHMENT protein G3P|Pseudomonas phage Pf3 (Bacteriophage Pf3)

Query: 1 WEDIGG 6
W+D+GG
Sbjct: 234 WQDVGG 239


>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 1 WEDIGGLEDV 10
WED EDV
Sbjct: 373 WEDWAPYEDV 382


>sp|APYC1_BPSBS|ANTI-PYCSAR protein Apyc1|Bacillus phage SBSphiJ

Query: 2 EDIGGLEDV 10
+ IGGLE+V
Sbjct: 68 DHIGGLEEV 76


>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 1 WEDIGGLEDV 10
WED EDV
Sbjct: 373 WEDWAPYEDV 382


>sp|ACPY1_BPGO7|ANTI-PYCSAR protein Apyc1|Bacillus phage vB_BveM-Goe7

Query: 2 EDIGGLEDV 10
+ IGGLE+V
Sbjct: 68 DHIGGLEEV 76


>sp|ACPY1_BPGO3|ANTI-PYCSAR protein Apyc1|Bacillus phage vB_BsuM-Goe3

Query: 2 EDIGGLEDV 10
+ IGGLE+V
Sbjct: 68 DHIGGLEEV 76




97|Sequence|481|490|GLEDVKRELQ

>sp|VP15_NPVOP|PUTATIVE 15 kDa capsid protein|Orgyia pseudotsugata multicapsid

Query: 1 GLEDVKREL 9
G+ D+KREL
Sbjct: 47 GVADIKREL 55


>sp|LTP_SHV21|LARGE tegument protein deneddylase|Saimiriine herpesvirus 2 (strain 11)

Query: 2 LEDVKRELQ 10
L+D+K+E+Q
Sbjct: 780 LDDIKKEIQ 788


>sp|PE38_NPVAC|MAJOR immediate early protein|Autographa californica nuclear

Query: 2 LEDVKRELQ 10
LED++R+LQ
Sbjct: 19 LEDLRRQLQ 27


>sp|RDRP_SCPMV|REPLICASE polyprotein P2AB|Southern cowpea mosaic virus (SCPMV)

Query: 2 LEDVKREL 9
LED++REL
Sbjct: 864 LEDLEREL 871


>sp|NEF_HV1MA|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 GLEDVKREL 9
G+ED +RE+
Sbjct: 175 GMEDAEREV 183


>sp|DNLI_ASFWA|DNA ligase|African swine fever virus (isolate

Query: 1 GLEDVKRELQ 10
GL+++K+EL+
Sbjct: 179 GLDNIKKELK 188


>sp|DNLI_ASFP4|DNA ligase|African swine fever virus (isolate

Query: 1 GLEDVKRELQ 10
GL+++K+EL+
Sbjct: 179 GLDNIKKELK 188


>sp|DNLI_ASFM2|DNA ligase|African swine fever virus (isolate

Query: 1 GLEDVKRELQ 10
GL+++K+EL+
Sbjct: 179 GLDNIKKELK 188


>sp|DNLI_ASFB7|DNA ligase|African swine fever virus (strain

Query: 1 GLEDVKRELQ 10
GL+++K+EL+
Sbjct: 179 GLDNIKKELK 188


>sp|DNLI_ASFK5|DNA ligase|African swine fever virus (isolate

Query: 1 GLEDVKRELQ 10
GL+++K+EL+
Sbjct: 179 GLDNIKKELK 188


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 2 LEDVKREL 9
+EDVK+E+
Sbjct: 1805 IEDVKKEI 1812


>sp|PRO_BLVJ|GAG-PRO polyprotein|Bovine leukemia virus (isolate Japanese

Query: 2 LEDVKRELQ 10
L+D+K+E++
Sbjct: 128 LQDIKKEIE 136


>sp|PRO_BLVAU|GAG-PRO polyprotein|Bovine leukemia virus (isolate Australian)

Query: 2 LEDVKRELQ 10
L+D+K+E++
Sbjct: 128 LQDIKKEIE 136


>sp|POL_BLVJ|GAG-PRO-POL polyprotein|Bovine leukemia virus (isolate Japanese

Query: 2 LEDVKRELQ 10
L+D+K+E++
Sbjct: 128 LQDIKKEIE 136


>sp|POL_BLVAU|GAG-PRO-POL polyprotein|Bovine leukemia virus (isolate Australian)

Query: 2 LEDVKRELQ 10
L+D+K+E++
Sbjct: 128 LQDIKKEIE 136


>sp|GAG_BLVJ|GAG polyprotein|Bovine leukemia virus (isolate Japanese

Query: 2 LEDVKRELQ 10
L+D+K+E++
Sbjct: 128 LQDIKKEIE 136


>sp|GAG_BLVAU|GAG polyprotein|Bovine leukemia virus (isolate Australian)

Query: 2 LEDVKRELQ 10
L+D+K+E++
Sbjct: 128 LQDIKKEIE 136


>sp|L_SHRV|RNA-DIRECTED RNA polymerase L|Snakehead rhabdovirus (SHRV)

Query: 1 GLEDVKREL 9
GL+D+ REL
Sbjct: 989 GLQDLDREL 997


>sp|RDRP_OUMVV|RNA-DEPENDENT RNA polymerase|Ourmia melon virus (isolate Melon/Iran/VE9)

Query: 2 LEDVKRE 8
LED+KRE
Sbjct: 227 LEDLKRE 233


>sp|VINT_SSV1|INTEGRASE spindle-shape virus 1 (SSV1)

Query: 2 LEDVKRELQ 10
LE++KR LQ
Sbjct: 181 LEEIKRTLQ 189




98|Sequence|486|495|KRELQELVQY

>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2

Query: 2 RELQELVQY 10
++LQ+L+QY
Sbjct: 189 KDLQDLLQY 197


>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 RELQELVQY 10
RE QE+++Y
Sbjct: 873 REAQEMIKY 881


>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)

Query: 2 RELQELVQY 10
RE QE+++Y
Sbjct: 873 REAQEMIKY 881


>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1

Query: 2 RELQELVQY 10
++LQ+L+QY
Sbjct: 183 KDLQDLLQY 191


>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1

Query: 2 RELQELVQY 10
++LQ+L+QY
Sbjct: 183 KDLQDLLQY 191


>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1

Query: 2 RELQELVQY 10
++LQ+L+QY
Sbjct: 183 KDLQDLLQY 191


>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 2 RELQELVQY 10
++LQ+L+QY
Sbjct: 183 KDLQDLLQY 191


>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 2 RELQELVQY 10
++LQ+L+QY
Sbjct: 183 KDLQDLLQY 191


>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 2 RELQELVQY 10
++LQ+L+QY
Sbjct: 183 KDLQDLLQY 191


>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2

Query: 2 RELQELVQY 10
++LQ+L+QY
Sbjct: 189 KDLQDLLQY 197


>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1

Query: 2 RELQELVQY 10
++LQ+L+QY
Sbjct: 183 KDLQDLLQY 191


>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1

Query: 2 RELQELVQY 10
++LQ+L+QY
Sbjct: 183 KDLQDLLQY 191


>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1

Query: 2 RELQELVQY 10
++LQ+L+QY
Sbjct: 183 KDLQDLLQY 191


>sp|ITP_SHV21|INNER tegument protein|Saimiriine herpesvirus 2 (strain 11)

Query: 3 ELQELVQY 10
E+Q+L+QY
Sbjct: 597 EIQQLIQY 604


>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1

Query: 2 RELQELVQY 10
++LQ+L+QY
Sbjct: 183 KDLQDLLQY 191


>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2

Query: 2 RELQELVQY 10
++LQ+L+QY
Sbjct: 189 KDLQDLLQY 197


>sp|RDRP_BBSCV|RNA replication polyprotein|Blueberry scorch virus (BBScV)

Query: 2 RELQELVQY 10
REL LV+Y
Sbjct: 1108 RELSSLVEY 1116


>sp|VE7_HPV37|PROTEIN E7|Human papillomavirus 37

Query: 3 ELQELVQ 9
ELQELVQ
Sbjct: 14 ELQELVQ 20


>sp|VE7_HPV15|PROTEIN E7|Human papillomavirus 15

Query: 3 ELQELVQ 9
ELQELVQ
Sbjct: 14 ELQELVQ 20




99|Sequence|491|500|ELVQYPVEHP

>sp|POL2_BAYMY|GENOME polyprotein 2|Barley yellow mosaic virus (isolate

Query: 2 LVQYPVEH 9
+VQY VEH
Sbjct: 447 VVQYRVEH 454


>sp|POLG_TVMV|GENOME polyprotein|Tobacco vein mottling virus (TVMV)

Query: 1 ELVQYPVE 8
E V+YP+E
Sbjct: 2895 EQVEYPIE 2902


>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28

Query: 1 ELVQYPVEH 9
E+VQY +H
Sbjct: 372 EMVQYAYDH 380


>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3

Query: 1 ELVQYPVEH 9
E+VQY +H
Sbjct: 369 EMVQYAYDH 377


>sp|VG28_BPML5|MINOR tail protein Gp28|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 5 YPVEH 9
YPVEH
Sbjct: 537 YPVEH 541


>sp|VG28_BPMD2|MINOR tail protein Gp28|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 5 YPVEH 9
YPVEH
Sbjct: 537 YPVEH 541




100|Sequence|496|505|PVEHPDKFLK

>sp|A47_VACCC|PROTEIN A47|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 VEHPDKFLK 10
V+HPDKFL+
Sbjct: 56 VDHPDKFLE 64


>sp|A47_VACCW|PROTEIN A47|Vaccinia virus (strain Western Reserve)

Query: 2 VEHPDKFLK 10
V+HPDKFL+
Sbjct: 56 VDHPDKFLE 64


>sp|A47_VACCA|PROTEIN A47|Vaccinia virus (strain Ankara) (VACV)

Query: 2 VEHPDKFLK 10
V+HPDKFL+
Sbjct: 51 VDHPDKFLE 59


>sp|A47_VARV|PROTEIN A47|Variola virus

Query: 2 VEHPDKFLK 10
V+HPDKFL+
Sbjct: 56 VDHPDKFLE 64


>sp|A47_VAR67|PROTEIN A47|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2 VEHPDKFLK 10
V+HPDKFL+
Sbjct: 56 VDHPDKFLE 64


>sp|PHOSP_NDVA|PHOSPHOPROTEIN disease virus (strain Chicken/Australia-Victoria/32)

Query: 1 PVEHPDKFLK 10
PV+HP + +K
Sbjct: 330 PVQHPSELIK 339


>sp|YL410_MIMIV|PUTATIVE core protein L410|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PVEHPDK 7
PV HPD+
Sbjct: 596 PVRHPDQ 602


>sp|PHOSP_NDVU2|PHOSPHOPROTEIN disease virus (strain Ulster/2C)

Query: 1 PVEHPDKFLK 10
PV+HP + +K
Sbjct: 330 PVQHPSELIK 339


>sp|CAP3_ADECR|PRE-HEXON-LINKING protein IIIa|Canine adenovirus serotype 1 (strain

Query: 5 PDKFLK 10
PDKFLK
Sbjct: 539 PDKFLK 544


>sp|CAP3_ADECC|PRE-HEXON-LINKING protein IIIa|Canine adenovirus serotype 1 (strain

Query: 5 PDKFLK 10
PDKFLK
Sbjct: 539 PDKFLK 544


>sp|RDRP_MCMVK|RNA-DIRECTED RNA polymerase|Maize chlorotic mottle virus (isolate

Query: 1 PVEHP 5
PVEHP
Sbjct: 621 PVEHP 625


>sp|CAPSD_GLRV3|CAPSID protein|Grapevine leafroll-associated virus 3 (isolate

Query: 5 PDKFLK 10
PDKFLK
Sbjct: 108 PDKFLK 113


>sp|Y00F_BPT4|UNCHARACTERIZED 19.7 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 PVEHPDKFL 9
PV H DK L
Sbjct: 65 PVPHEDKLL 73


>sp|RDRP_CPMV1|RNA-DIRECTED RNA polymerase|Cryphonectria parasitica mitovirus 1 (strain

Query: 3 EHPDKFLK 10
EH D F+K
Sbjct: 104 EHEDSFMK 111


>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)

Query: 2 VEHPDKFLK 10
V+HPDK ++
Sbjct: 730 VQHPDKTVR 738


>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)

Query: 2 VEHPDKFLK 10
V+HPDK ++
Sbjct: 730 VQHPDKTVR 738




101|Sequence|501|510|DKFLKFGMTP

>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 2 KFLKFGMT 9
KF+KFGMT
Sbjct: 2103 KFIKFGMT 2110


>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 2 KFLKFGMT 9
KF+KFGMT
Sbjct: 2103 KFIKFGMT 2110


>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 2 KFLKFGMT 9
KF+KFGMT
Sbjct: 2103 KFIKFGMT 2110


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 2 KFLKFGMT 9
KF+KFGMT
Sbjct: 2103 KFIKFGMT 2110


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 2 KFLKFGMT 9
KF+KFGMT
Sbjct: 2103 KFIKFGMT 2110


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 2 KFLKFGMT 9
KF+KFGMT
Sbjct: 2103 KFIKFGMT 2110


>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)

Query: 2 KFLKFGMT 9
KF+KFGMT
Sbjct: 2103 KFIKFGMT 2110


>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)

Query: 2 KFLKFGMT 9
KF+KFGMT
Sbjct: 2103 KFIKFGMT 2110


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 2 KFLKFGMT 9
KF+KFGMT
Sbjct: 2103 KFIKFGMT 2110


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 2 KFLKFGMT 9
KF+KFGMT
Sbjct: 2103 KFIKFGMT 2110


>sp|ENDO2_BPT5|PUTATIVE endonuclease|Escherichia phage T5 (Enterobacteria phage

Query: 3 FLKFGMT 9
FLKFG+T
Sbjct: 161 FLKFGIT 167


>sp|VU8_HHV7J|PROTEIN U8|Human herpesvirus 7 (strain JI)

Query: 1 DKFLKFGM 8
DKF++FG+
Sbjct: 133 DKFVRFGI 140


>sp|YR731_MIMIV|PUTATIVE BTB/POZ domain and WD-repeat|Acanthamoeba polyphaga mimivirus

Query: 2 KFLKFGM 8
KFLKFG+
Sbjct: 436 KFLKFGV 442


>sp|RDRP_MNSV|RNA-DIRECTED RNA polymerase|Melon necrotic spot virus (MNSV)

Query: 3 FLKFGMTP 10
+L FG+TP
Sbjct: 747 YLAFGITP 754


>sp|ENLYS_BPPGK|ENDOLYSIN LysK|Staphylococcus phage K

Query: 1 DKFLKFGMTP 10
+KF ++G+TP
Sbjct: 307 EKFKEWGLTP 316


>sp|ENLYS_BPG15|ENDOLYSIN LysGH15|Staphylococcus phage G15

Query: 1 DKFLKFGMTP 10
+KF ++G+TP
Sbjct: 307 EKFKEWGLTP 316


>sp|CAP3_ADECR|PRE-HEXON-LINKING protein IIIa|Canine adenovirus serotype 1 (strain

Query: 1 DKFLKF 6
DKFLKF
Sbjct: 540 DKFLKF 545


>sp|CAP3_ADECC|PRE-HEXON-LINKING protein IIIa|Canine adenovirus serotype 1 (strain

Query: 1 DKFLKF 6
DKFLKF
Sbjct: 540 DKFLKF 545


>sp|RDRP_TNVA|RNA-DIRECTED RNA polymerase|Tobacco necrosis virus (strain A)

Query: 3 FLKFGMTP 10
+L FG+TP
Sbjct: 678 YLAFGITP 685


>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 5 KFGMTP 10
KFG+TP
Sbjct: 119 KFGLTP 124


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 DKFLKFGMT 9
D+F K GMT
Sbjct: 2107 DEFRKLGMT 2115


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 DKFLKFGMT 9
D+F K GMT
Sbjct: 2108 DEFRKLGMT 2116


>sp|VL2_BPV1|MINOR capsid protein L2|Bovine papillomavirus type 1

Query: 1 DKFLKFG 7
DK LKFG
Sbjct: 40 DKILKFG 46


>sp|PAX_I77AD|PROTEIN PA-X|Influenza A virus (strain A/Swine/Tennessee/26/1977

Query: 1 DKFLKFGMT 9
D+F+K G+T
Sbjct: 115 DRFIKIGVT 123


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 DKFLKFGMT 9
D+F K GMT
Sbjct: 2108 DEFKKLGMT 2116


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 DKFLKFGMT 9
D+F K GMT
Sbjct: 2107 DEFKKLGMT 2115


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 DKFLKFGMT 9
D+F K GMT
Sbjct: 2107 DEFKKLGMT 2115


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 DKFLKFGMT 9
D+F K GMT
Sbjct: 2107 DEFKKLGMT 2115


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 3 FLKFGMTP 10
+ KFG TP
Sbjct: 2558 YAKFGFTP 2565


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 DKFLKFGMT 9
D+F K GMT
Sbjct: 2107 DEFKKLGMT 2115


>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977

Query: 1 DKFLKFGMT 9
D+F+K G+T
Sbjct: 115 DRFIKIGVT 123


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3 FLKFGMTP 10
+ KFG TP
Sbjct: 2558 YAKFGFTP 2565


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 DKFLKFGMT 9
D+F K GMT
Sbjct: 1941 DEFKKLGMT 1949


>sp|YL532_MIMIV|CYTOCHROME P450-like protein L532|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 KFLKFGMTP 10
+FL FG+ P
Sbjct: 35 QFLSFGLIP 43




102|Sequence|506|515|FGMTPSKGVL

>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 GMTPSKG 8
G+TPSKG
Sbjct: 6579 GLTPSKG 6585


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 2 GMTPSKG 8
G+TPSKG
Sbjct: 6577 GLTPSKG 6583


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 2 GMTPSKG 8
G+TPSKG
Sbjct: 6573 GLTPSKG 6579


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 2 GMTPSKG 8
G+TPSKG
Sbjct: 6585 GLTPSKG 6591


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 2 GMTPSKGVL 10
G+TP+ G+L
Sbjct: 2307 GITPTAGIL 2315


>sp|VP2_PESV|MINOR capsid protein VP2|Porcine enteric sapovirus (isolate Swine/United

Query: 2 GMTPSKGV 9
G+TPSKG+
Sbjct: 135 GVTPSKGL 142


>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain

Query: 1 FGMTPSKG 8
F +TP KG
Sbjct: 545 FSLTPQKG 552




103|Sequence|511|520|SKGVLFYGPP

>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25

Query: 4 VLFYGPP 10
+LFYGPP
Sbjct: 428 ILFYGPP 434


>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37

Query: 4 VLFYGPP 10
+LFYGPP
Sbjct: 433 LLFYGPP 439


>sp|RFCS4_MIMIV|PUTATIVE replication factor C small|Acanthamoeba polyphaga mimivirus

Query: 5 LFYGPP 10
LFYGPP
Sbjct: 44 LFYGPP 49


>sp|YR476_MIMIV|PUTATIVE AAA family ATPase R476|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 KGVLFYGPP 10
KG++ +GPP
Sbjct: 604 KGIILHGPP 612


>sp|VE1_MNPVA|REPLICATION protein E1|Mastomys natalensis papillomavirus (isolate African

Query: 4 VLFYGPP 10
++FYGPP
Sbjct: 425 LVFYGPP 431


>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47

Query: 4 VLFYGPP 10
+LF+GPP
Sbjct: 429 ILFHGPP 435


>sp|VE1_CRPVK|REPLICATION protein E1|Cottontail rabbit papillomavirus (strain Kansas)

Query: 4 VLFYGPP 10
++FYGPP
Sbjct: 427 MVFYGPP 433


>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54

Query: 4 VLFYGPP 10
+L YGPP
Sbjct: 456 ILLYGPP 462


>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21

Query: 4 VLFYGPP 10
+L YGPP
Sbjct: 427 ILIYGPP 433


>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19

Query: 4 VLFYGPP 10
+L YGPP
Sbjct: 428 ILIYGPP 434


>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14

Query: 4 VLFYGPP 10
+L YGPP
Sbjct: 429 ILIYGPP 435


>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12

Query: 4 VLFYGPP 10
+L YGPP
Sbjct: 428 ILIYGPP 434


>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5

Query: 4 VLFYGPP 10
+L YGPP
Sbjct: 430 ILIYGPP 436


>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b

Query: 4 VLFYGPP 10
+L YGPP
Sbjct: 430 ILIYGPP 436


>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9

Query: 4 VLFYGPP 10
+LF+GPP
Sbjct: 429 LLFHGPP 435


>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)

Query: 6 FYGPP 10
FYGPP
Sbjct: 326 FYGPP 330


>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)

Query: 6 FYGPP 10
FYGPP
Sbjct: 326 FYGPP 330


>sp|VF136_IIV3|UNCHARACTERIZED protein 042R|Invertebrate iridescent virus 3 (IIV-3)

Query: 3 GVLFYGP 9
G LFYGP
Sbjct: 46 GNLFYGP 52


>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38

Query: 4 VLFYGPP 10
+L YGPP
Sbjct: 428 LLIYGPP 434


>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24

Query: 4 VLFYGPP 10
+L YGPP
Sbjct: 431 LLIYGPP 437


>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23

Query: 4 VLFYGPP 10
+L YGPP
Sbjct: 431 LLIYGPP 437


>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8

Query: 4 VLFYGPP 10
+L YGPP
Sbjct: 427 LLIYGPP 433


>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15

Query: 4 VLFYGPP 10
+L YGPP
Sbjct: 426 MLIYGPP 432


>sp|GH_GAHVR|ENVELOPE glycoprotein H|Gallid herpesvirus 2 (strain RB-1b)

Query: 1 SKGVLFYGP 9
+ GVLFY P
Sbjct: 74 ANGVLFYMP 82


>sp|GH_GAHVM|ENVELOPE glycoprotein H|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 SKGVLFYGP 9
+ GVLFY P
Sbjct: 74 ANGVLFYMP 82


>sp|ICP46_IIV6|IMMEDIATE-EARLY protein ICP-46 homolog|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 KGVLFYG 8
+GV+FYG
Sbjct: 78 RGVVFYG 84


>sp|CVC2_ELHVK|CAPSID vertex component 2|Elephantid herpesvirus 1 (isolate Asian

Query: 1 SKGVLFYGPP 10
++ ++FY PP
Sbjct: 297 NEDIVFYNPP 306


>sp|Y529_ATV|UNCHARACTERIZED protein ORF529|Acidianus two-tailed virus (ATV)

Query: 3 GVLFYGPP 10
G+L YG P
Sbjct: 111 GILLYGAP 118




104|Sequence|516|525|FYGPPGCGKT

>sp|RFCS4_MIMIV|PUTATIVE replication factor C small|Acanthamoeba polyphaga mimivirus

Query: 1 FYGPPGCGKT 10
FYGPPG GKT
Sbjct: 45 FYGPPGTGKT 54


>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)

Query: 1 FYGPPGCGKT 10
F GPPGCGK+
Sbjct: 336 FIGPPGCGKS 345


>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant

Query: 1 FYGPPGCGKT 10
F GPPGCGK+
Sbjct: 336 FIGPPGCGKS 345


>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 FYGPPGCGKT 10
F GPPGCGK+
Sbjct: 336 FIGPPGCGKS 345


>sp|POLG_FCVC6|GENOME polyprotein|Feline calicivirus (strain CFI/68 FIV)

Query: 3 GPPGCGKT 10
GPPGCGKT
Sbjct: 484 GPPGCGKT 491


>sp|POLG_FCV|GENOME polyprotein|Feline calicivirus (FCV)

Query: 3 GPPGCGKT 10
GPPGCGKT
Sbjct: 484 GPPGCGKT 491


>sp|POLG_FCVF9|GENOME polyprotein|Feline calicivirus (strain F9) (FCV)

Query: 3 GPPGCGKT 10
GPPGCGKT
Sbjct: 484 GPPGCGKT 491


>sp|POLG_FCVF4|GENOME polyprotein|Feline calicivirus (strain Japanese F4)

Query: 3 GPPGCGKT 10
GPPGCGKT
Sbjct: 484 GPPGCGKT 491


>sp|POLG_FCVUR|GENOME polyprotein|Feline calicivirus (strain Cat/United

Query: 3 GPPGCGKT 10
GPPGCGKT
Sbjct: 484 GPPGCGKT 491


>sp|POLG_VESVA|GENOME polyprotein|Vesicular exanthema of swine virus

Query: 3 GPPGCGKT 10
GPPGCGKT
Sbjct: 590 GPPGCGKT 597


>sp|POLG_SMSV1|GENOME polyprotein|San Miguel sea lion virus

Query: 3 GPPGCGKT 10
GPPGCGKT
Sbjct: 590 GPPGCGKT 597


>sp|POL1_RRVC|RNA1 polyprotein|Raspberry ringspot virus (strain cherry)

Query: 2 YGPPGCGKT 10
YGPPG GKT
Sbjct: 803 YGPPGVGKT 811


>sp|REP_BFDV|REPLICATION-ASSOCIATED protein|Beak and feather disease virus

Query: 1 FYGPPGCGKT 10
YGPPGCGK+
Sbjct: 163 IYGPPGCGKS 172


>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)

Query: 1 FYGPPGCGKT 10
FYGPP GKT
Sbjct: 326 FYGPPSTGKT 335


>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)

Query: 1 FYGPPGCGKT 10
FYGPP GKT
Sbjct: 326 FYGPPSTGKT 335


>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25

Query: 1 FYGPPGCGKT 10
FYGPP GK+
Sbjct: 430 FYGPPNTGKS 439


>sp|VE1_CRPVK|REPLICATION protein E1|Cottontail rabbit papillomavirus (strain Kansas)

Query: 1 FYGPPGCGKT 10
FYGPP GK+
Sbjct: 429 FYGPPNSGKS 438


>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7

Query: 2 YGPPGCGKT 10
YGP GCGK+
Sbjct: 170 YGPTGCGKS 178


>sp|PKG1_ADECC|PACKAGING protein 1|Canine adenovirus serotype 1 (strain

Query: 2 YGPPGCGKT 10
YGP GCGK+
Sbjct: 169 YGPTGCGKS 177


>sp|NS1_ADVG|INITIATOR protein NS1|Aleutian mink disease parvovirus (strain

Query: 1 FYGPPGCGKT 10
FYGP G GKT
Sbjct: 430 FYGPGGTGKT 439


>sp|PKG1_ADECT|PACKAGING protein 1|Canine adenovirus serotype 2 (strain

Query: 2 YGPPGCGKT 10
YGP GCGK+
Sbjct: 169 YGPTGCGKS 177


>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37

Query: 1 FYGPPGCGKT 10
FYGPP GK+
Sbjct: 435 FYGPPDTGKS 444


>sp|VE1_MNPVA|REPLICATION protein E1|Mastomys natalensis papillomavirus (isolate African

Query: 1 FYGPPGCGKT 10
FYGPP GK+
Sbjct: 427 FYGPPNTGKS 436


>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40

Query: 2 YGPPGCGKT 10
YGP GCGK+
Sbjct: 169 YGPTGCGKS 177


>sp|PKG1_ADECR|PACKAGING protein 1|Canine adenovirus serotype 1 (strain

Query: 2 YGPPGCGKT 10
YGP GCGK+
Sbjct: 225 YGPTGCGKS 233


>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12

Query: 2 YGPPGCGKT 10
YGP GCGK+
Sbjct: 172 YGPTGCGKS 180


>sp|PKG1_ADE05|PACKAGING protein 1|Human adenovirus C serotype 5

Query: 2 YGPPGCGKT 10
YGP GCGK+
Sbjct: 170 YGPTGCGKS 178


>sp|YR476_MIMIV|PUTATIVE AAA family ATPase R476|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 FYGPPGCGKT 10
+GPPG GKT
Sbjct: 608 LHGPPGTGKT 617


>sp|PKG1_ADE02|PACKAGING protein 1|Human adenovirus C serotype 2

Query: 2 YGPPGCGKT 10
YGP GCGK+
Sbjct: 170 YGPTGCGKS 178


>sp|REP_PICV|REPLICATION-ASSOCIATED protein|Pigeon circovirus (PiCV) (Columbid circovirus)

Query: 3 GPPGCGKT 10
GPPGCGK+
Sbjct: 192 GPPGCGKS 199


>sp|PKG1_ADEB3|PACKAGING protein 1|Bovine adenovirus B serotype 3

Query: 2 YGPPGCGKT 10
YGP GCGK+
Sbjct: 168 YGPTGCGKS 176


>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49

Query: 2 YGPPGCGKT 10
+GPP CGK+
Sbjct: 436 HGPPDCGKS 444


>sp|POLG_CACV4|GENOME polyprotein|Canine calicivirus (strain 48) (CaCV)

Query: 3 GPPGCGKT 10
GP GCGKT
Sbjct: 623 GPAGCGKT 630


>sp|RFCS3_MIMIV|PUTATIVE replication factor C small|Acanthamoeba polyphaga mimivirus

Query: 1 FYGPPGCGKT 10
F+GP G GKT
Sbjct: 55 FFGPSGSGKT 64


>sp|POLG_PESV|GENOME polyprotein|Porcine enteric sapovirus (isolate Swine/United

Query: 1 FYGPPGCGKT 10
F GPPG GKT
Sbjct: 462 FGGPPGIGKT 471


>sp|LONH_MIMIV|LON protease homolog|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 515 GPPGVGKT 522


>sp|RDRP_HASV|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Helicoverpa armigera stunt virus (HaSV)

Query: 1 FYGPPGCGKT 10
+ GPPG GKT
Sbjct: 607 YEGPPGSGKT 616


>sp|YR776_MIMIV|UNCHARACTERIZED protein R776|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 FYGPPGCGKT 10
YG GCGKT
Sbjct: 206 LYGESGCGKT 215


>sp|RDRP_YOMV|REPLICASE large subunit|Youcai mosaic virus (YoMV)

Query: 3 GPPGCGKT 10
G PGCGKT
Sbjct: 823 GVPGCGKT 830


>sp|RDRP_TVCV|REPLICASE large subunit|Turnip vein-clearing virus (TVCV)

Query: 3 GPPGCGKT 10
G PGCGKT
Sbjct: 827 GVPGCGKT 834


>sp|RDRP_TOMS1|REPLICASE large subunit|Tomato mosaic virus (strain S-1)

Query: 3 GPPGCGKT 10
G PGCGKT
Sbjct: 833 GVPGCGKT 840


>sp|RDRP_TOML|REPLICASE large subunit|Tomato mosaic virus (strain L)

Query: 3 GPPGCGKT 10
G PGCGKT
Sbjct: 833 GVPGCGKT 840


>sp|RDRP_TOMK2|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh

Query: 3 GPPGCGKT 10
G PGCGKT
Sbjct: 833 GVPGCGKT 840


>sp|RDRP_TOMK1|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh

Query: 3 GPPGCGKT 10
G PGCGKT
Sbjct: 833 GVPGCGKT 840


>sp|RDRP_TMVRA|REPLICASE large subunit|Tobacco mosaic virus (strain Rakkyo)

Query: 3 GPPGCGKT 10
G PGCGKT
Sbjct: 833 GVPGCGKT 840


>sp|RDRP_TMVOM|REPLICASE large subunit|Tobacco mosaic virus (strain OM)

Query: 3 GPPGCGKT 10
G PGCGKT
Sbjct: 833 GVPGCGKT 840


>sp|RDRP_TMVKR|REPLICASE large subunit|Tobacco mosaic virus (strain Korean

Query: 3 GPPGCGKT 10
G PGCGKT
Sbjct: 833 GVPGCGKT 840


>sp|RDRP_TMVB|REPLICASE large subunit|Tobacco mosaic virus (strain B935A)

Query: 3 GPPGCGKT 10
G PGCGKT
Sbjct: 833 GVPGCGKT 840


>sp|RDRP_TMV|REPLICASE large subunit|Tobacco mosaic virus (strain vulgare)

Query: 3 GPPGCGKT 10
G PGCGKT
Sbjct: 833 GVPGCGKT 840


>sp|RDRP_TMOB|REPLICASE large subunit|Tobamovirus Ob

Query: 3 GPPGCGKT 10
G PGCGKT
Sbjct: 832 GVPGCGKT 839


>sp|RDRP_TBRFV|REPLICASE large subunit|Tomato brown rugose fruit virus

Query: 3 GPPGCGKT 10
G PGCGKT
Sbjct: 833 GVPGCGKT 840


>sp|RDRP_SHMV|REPLICASE large subunit|Sunn-hemp mosaic virus (SHMV) (TMV

Query: 3 GPPGCGKT 10
G PGCGKT
Sbjct: 849 GVPGCGKT 856


>sp|RDRP_PMMVS|REPLICASE large subunit|Pepper mild mottle virus (strain

Query: 3 GPPGCGKT 10
G PGCGKT
Sbjct: 835 GVPGCGKT 842


>sp|RDRP_PMMVJ|REPLICASE large subunit|Pepper mild mottle virus (strain

Query: 3 GPPGCGKT 10
G PGCGKT
Sbjct: 835 GVPGCGKT 842


>sp|RDRP_ORSVS|REPLICASE large subunit|Odontoglossum ringspot virus (isolate Singapore

Query: 3 GPPGCGKT 10
G PGCGKT
Sbjct: 826 GVPGCGKT 833


>sp|RDRP_ORSVC|REPLICASE large subunit|Odontoglossum ringspot virus (isolate Korean

Query: 3 GPPGCGKT 10
G PGCGKT
Sbjct: 826 GVPGCGKT 833


>sp|RDRP_CGMVS|REPLICASE large subunit|Cucumber green mottle mosaic virus

Query: 3 GPPGCGKT 10
G PGCGKT
Sbjct: 863 GVPGCGKT 870


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 1 FYGPPGCGKT 10
YGPPG GK+
Sbjct: 1446 LYGPPGTGKS 1455


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 5667 GPPGTGKT 5674


>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 5649 GPPGTGKT 5656


>sp|VE1_COPV6|REPLICATION protein E1|Canine oral papillomavirus (strain Y62)

Query: 1 FYGPPGCGKT 10
F+GPP GK+
Sbjct: 424 FWGPPNTGKS 433


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 5543 GPPGTGKT 5550


>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47

Query: 1 FYGPPGCGKT 10
F+GPP GK+
Sbjct: 431 FHGPPNTGKS 440


>sp|YL872_MIMIV|UNCHARACTERIZED protein L872|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 FYGPPGCGKT 10
YGPP GK+
Sbjct: 70 LYGPPASGKS 79


>sp|NS1_PAVBP|INITIATOR protein NS1|Bovine parvovirus 1 (BPV-1)

Query: 1 FYGPPGCGKT 10
FYGP GKT
Sbjct: 442 FYGPASTGKT 451


>sp|REP_PCV1|REPLICATION-ASSOCIATED protein|Porcine circovirus 1 (PCV1)

Query: 3 GPPGCGKT 10
GPPGCGK+
Sbjct: 171 GPPGCGKS 178


>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60

Query: 1 FYGPPGCGKT 10
F+GPP GK+
Sbjct: 435 FWGPPDTGKS 444


>sp|REP_PCV2|REPLICATION-ASSOCIATED protein|Porcine circovirus 2 (PCV2)

Query: 3 GPPGCGKT 10
GPPGCGK+
Sbjct: 174 GPPGCGKS 181


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 560 GPPGIGKT 567


>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30

Query: 1 FYGPPGCGKT 10
YGPP GK+
Sbjct: 457 LYGPPNTGKS 466


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 2 YGPPGCGKT 10
+GPPG GK+
Sbjct: 1210 HGPPGAGKS 1218


>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9

Query: 1 FYGPPGCGKT 10
F+GPP GK+
Sbjct: 431 FHGPPDTGKS 440


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 561 GPPGIGKT 568


>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69

Query: 2 YGPPGCGKT 10
YGPP GK+
Sbjct: 462 YGPPNTGKS 470


>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63

Query: 2 YGPPGCGKT 10
YGPP GK+
Sbjct: 445 YGPPNTGKS 453


>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51

Query: 2 YGPPGCGKT 10
YGPP GK+
Sbjct: 462 YGPPNTGKS 470


>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26

Query: 2 YGPPGCGKT 10
YGPP GK+
Sbjct: 466 YGPPNTGKS 474


>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24

Query: 2 YGPPGCGKT 10
YGPP GK+
Sbjct: 434 YGPPNTGKS 442


>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21

Query: 2 YGPPGCGKT 10
YGPP GK+
Sbjct: 430 YGPPNTGKS 438


>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19

Query: 2 YGPPGCGKT 10
YGPP GK+
Sbjct: 431 YGPPNTGKS 439


>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14

Query: 2 YGPPGCGKT 10
YGPP GK+
Sbjct: 432 YGPPNTGKS 440


>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8

Query: 2 YGPPGCGKT 10
YGPP GK+
Sbjct: 430 YGPPNTGKS 438


>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b

Query: 2 YGPPGCGKT 10
YGPP GK+
Sbjct: 433 YGPPNSGKS 441


>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12

Query: 2 YGPPGCGKT 10
YGPP GK+
Sbjct: 431 YGPPNSGKS 439


>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5

Query: 2 YGPPGCGKT 10
YGPP GK+
Sbjct: 433 YGPPNSGKS 441


>sp|POL1_TOTV|RNA1 polyprotein|Tomato torrado virus (isolate Solanum

Query: 1 FYGPPGCGKT 10
+YG GCGK+
Sbjct: 391 WYGASGCGKS 400


>sp|POLN_SAV1|POLYPROTEIN P1234|Alphavirus salmon subtype 1 (SAV1)

Query: 2 YGPPGCGKT 10
YG PG GKT
Sbjct: 750 YGVPGAGKT 758


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 2 YGPPGCGKT 10
+GPPG GK+
Sbjct: 1217 HGPPGTGKS 1225


>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 481 GPPGIGKT 488


>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73

Query: 1 FYGPPGCGKT 10
YGPP GK+
Sbjct: 476 LYGPPDTGKS 485


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 2 YGPPGCGKT 10
+GPPG GK+
Sbjct: 1217 HGPPGTGKS 1225


>sp|POLN_SAV2|POLYPROTEIN P1234|Alphavirus salmon subtype 2 (SAV2)

Query: 2 YGPPGCGKT 10
YG PG GKT
Sbjct: 749 YGVPGAGKT 757


>sp|CFXQ_MIMIV|PUTATIVE cfxQ-like protein R730|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 173 GPPGVGKS 180


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5666 GPPGTGKS 5673


>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)

Query: 1 FYGPPGCGK 9
YGPPG GK
Sbjct: 1385 LYGPPGTGK 1393


Query: 1 FYGPPG 6
FY PPG
Sbjct: 822 FYAPPG 827


>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human

Query: 1 FYGPPGCGKT 10
FYGP GKT
Sbjct: 421 FYGPASTGKT 430


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5616 GPPGTGKS 5623


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5636 GPPGTGKS 5643


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 2 YGPPGCGKT 10
+GPPG GK+
Sbjct: 1213 HGPPGTGKS 1221


Query: 2 YGPPGCGK 9
Y PPG GK
Sbjct: 463 YTPPGIGK 470


>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54

Query: 1 FYGPPGCGKT 10
YGPP GK+
Sbjct: 458 LYGPPDTGKS 467


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5578 GPPGTGKS 5585


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5578 GPPGTGKS 5585


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5578 GPPGTGKS 5585


>sp|RDRP_NCBVS|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Nudaurelia capensis beta virus (isolate

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 566 GPPGSGKS 573


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5578 GPPGTGKS 5585


>sp|RDRP_TRVPP|REPLICASE large subunit|Tobacco rattle virus (isolate PpK20)

Query: 3 GPPGCGKT 10
G PGCGK+
Sbjct: 904 GVPGCGKS 911


>sp|RDRP_SBWMN|REPLICASE large subunit|Soil-borne wheat mosaic virus (strain

Query: 3 GPPGCGKT 10
G PGCGK+
Sbjct: 1027 GVPGCGKS 1034


>sp|RDRP_PMTVS|REPLICASE large subunit|Potato mop-top virus (isolate Potato/Sweden/Sw)

Query: 3 GPPGCGKT 10
G PGCGK+
Sbjct: 1014 GVPGCGKS 1021


Query: 1 FYGPPGCG 8
FY P CG
Sbjct: 287 FYDDPNCG 294


>sp|RDRP_PCV87|REPLICASE large subunit|Peanut clump virus (isolate 87/TGTA2)

Query: 3 GPPGCGKT 10
G PGCGK+
Sbjct: 856 GVPGCGKS 863


>sp|ALPHA_BSMV|REPLICATION protein alpha-A|Barley stripe mosaic virus (BSMV)

Query: 3 GPPGCGKT 10
G PGCGK+
Sbjct: 838 GVPGCGKS 845


>sp|194K_TRVSY|REPLICASE large subunit|Tobacco rattle virus (strain SYM)

Query: 3 GPPGCGKT 10
G PGCGK+
Sbjct: 904 GVPGCGKS 911


>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48

Query: 2 YGPPGCGKT 10
YGPP GK+
Sbjct: 421 YGPPDTGKS 429


>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38

Query: 2 YGPPGCGKT 10
YGPP GK+
Sbjct: 431 YGPPDTGKS 439


>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34

Query: 2 YGPPGCGKT 10
YGPP GK+
Sbjct: 474 YGPPDTGKS 482


>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23

Query: 2 YGPPGCGKT 10
YGPP GK+
Sbjct: 434 YGPPDTGKS 442


>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15

Query: 2 YGPPGCGKT 10
YGPP GK+
Sbjct: 429 YGPPDTGKS 437


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5578 GPPGTGKS 5585


>sp|POL_SINV3|POLYPROTEIN invicta virus 3 (SINV-3)

Query: 1 FYGPPGCGKT 10
YG PG GKT
Sbjct: 618 LYGEPGQGKT 627


Query: 1 FYGPPGCGKT 10
F GP G GKT
Sbjct: 394 FQGPGGIGKT 403


>sp|POLFS_SINV3|POLYPROTEIN-FSD invicta virus 3 (SINV-3)

Query: 1 FYGPPGCGKT 10
YG PG GKT
Sbjct: 618 LYGEPGQGKT 627


Query: 1 FYGPPGCGKT 10
F GP G GKT
Sbjct: 394 FQGPGGIGKT 403


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5643 GPPGTGKS 5650


Query: 1 FYGPPGCGKT 10
Y PP C T
Sbjct: 3284 LYQPPNCSVT 3293


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5636 GPPGTGKS 5643


Query: 1 FYGPPGCGKT 10
Y PP C T
Sbjct: 3277 LYQPPNCSVT 3286


>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)

Query: 1 FYGPPGCGK 9
YGPPG GK
Sbjct: 1382 LYGPPGTGK 1390


Query: 1 FYGPPG 6
FY PPG
Sbjct: 819 FYAPPG 824


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5152 GPPGSGKS 5159


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5683 GPPGTGKS 5690


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5589 GPPGTGKS 5596


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5583 GPPGTGKS 5590


>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human

Query: 1 FYGPPGCGKT 10
FYGP GKT
Sbjct: 421 FYGPASTGKT 430


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5150 GPPGSGKS 5157


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5150 GPPGSGKS 5157


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5581 GPPGTGKS 5588


>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 3293 GPPGAGKT 3300


>sp|R1A_LIYV9|REPLICASE polyprotein 1a|Lettuce infectious yellows virus (isolate

Query: 1 FYG-PPGCGKT 10
FY PPG GKT
Sbjct: 1570 FYNKPPGAGKT 1580


>sp|R1AB_LIYV9|REPLICASE polyprotein 1ab|Lettuce infectious yellows virus (isolate

Query: 1 FYG-PPGCGKT 10
FY PPG GKT
Sbjct: 1570 FYNKPPGAGKT 1580


>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human

Query: 1 FYGPPGCGKT 10
FYGP GKT
Sbjct: 421 FYGPASTGKT 430


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5606 GPPGTGKS 5613


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5592 GPPGTGKS 5599


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5235 GPPGSGKS 5242


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5611 GPPGTGKS 5618


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5577 GPPGTGKS 5584


>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus

Query: 1 FYGPPGCGKT 10
FYGP GKT
Sbjct: 421 FYGPASTGKT 430


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5663 GPPGTGKS 5670


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5278 GPPGSGKS 5285


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5669 GPPGTGKS 5676


>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 3263 GPPGAGKT 3270


>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 3292 GPPGAGKT 3299


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5210 GPPGSGKS 5217


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5253 GPPGSGKS 5260


>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 3293 GPPGAGKT 3300


>sp|RDRP_PCVC|RNA-DIRECTED RNA polymerase|Penicillium chrysogenum virus (isolate

Query: 4 PPGCGKT 10
P GCGKT
Sbjct: 90 PSGCGKT 96


>sp|RPOA_EAVBU|REPLICASE polyprotein 1ab|Equine arteritis virus (strain Bucyrus)

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 2528 GPPGSGKT 2535


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5321 GPPGSGKS 5328


>sp|VE1_BPV1|REPLICATION protein E1|Bovine papillomavirus type 1

Query: 1 FYGPPGCGKT 10
F GPP GK+
Sbjct: 431 FIGPPNTGKS 440


>sp|P32_TRVPP|32 kDa protein|Tobacco rattle virus (isolate PpK20)

Query: 1 FYGPPG 6
FYGPPG
Sbjct: 54 FYGPPG 59


>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 3186 GPPGSGKT 3193


>sp|YL712_MIMIV|UNCHARACTERIZED protein L712|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 FYGPPGCGKT 10
F G PG GKT
Sbjct: 248 FNGEPGTGKT 257


>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 3169 GPPGSGKT 3176


>sp|POLG_PYFV1|GENOME polyprotein|Parsnip yellow fleck virus (isolate

Query: 1 FYGPPGCGKT 10
YG PG GK+
Sbjct: 1465 LYGSPGVGKS 1474


>sp|EA59_LAMBD|PROTEIN ea59|Escherichia phage lambda (Bacteriophage lambda)

Query: 1 FYGPPGCGKT 10
F G GCGKT
Sbjct: 193 FIGRNGCGKT 202


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5310 GPPGSGKS 5317


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 5447 GPPGTGKS 5454


>sp|RDRP_TMGMV|REPLICASE large subunit|Tobacco mild green mosaic virus

Query: 3 GPPGCGK 9
G PGCGK
Sbjct: 831 GVPGCGK 837


>sp|POL1_TORVR|RNA1 polyprotein|Tomato ringspot virus (isolate raspberry)

Query: 1 FYGPPGCGKT 10
YG P CGK+
Sbjct: 794 LYGGPRCGKS 803


>sp|Y529_ATV|UNCHARACTERIZED protein ORF529|Acidianus two-tailed virus (ATV)

Query: 1 FYGPPGCGKT 10
YG PG GK+
Sbjct: 114 LYGAPGMGKS 123


>sp|POLG_SVV1|GENOME polyprotein|Seneca Valley virus (isolate -/United

Query: 3 GPPGCGKT 10
G PGCGK+
Sbjct: 1197 GKPGCGKS 1204


>sp|REP_HCYV5|REPLICATION-ASSOCIATED protein|Human associated cyclovirus 1 (isolate

Query: 1 FYGPPGCGKT 10
++GPPG GK+
Sbjct: 164 YHGPPGSGKS 173


>sp|VE1_BPV5|REPLICATION protein E1|Bovine papillomavirus type 5

Query: 1 FYGPPGCGKT 10
F GPP GK+
Sbjct: 450 FIGPPDTGKS 459


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 1 FYGPPGCGKT 10
+G PGCGK+
Sbjct: 1212 LHGNPGCGKS 1221


>sp|VE1_BPV2|REPLICATION protein E1|Bos taurus papillomavirus 2 (Bovine

Query: 1 FYGPPGCGKT 10
F GPP GK+
Sbjct: 430 FIGPPKTGKS 439


>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61

Query: 1 FYGPPGCGKT 10
FYGP GK+
Sbjct: 474 FYGPSDTGKS 483


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 1 FYGPPGC 7
FY PP C
Sbjct: 682 FYSPPHC 688


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 1 FYGPPGC 7
FY PP C
Sbjct: 682 FYSPPHC 688


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1 FYGPPGC 7
FY PP C
Sbjct: 682 FYSPPHC 688


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1 FYGPPGC 7
FY PP C
Sbjct: 682 FYSPPHC 688


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1 FYGPPGC 7
FY PP C
Sbjct: 682 FYSPPHC 688


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1 FYGPPGC 7
F+GP GC
Sbjct: 1094 FWGPDGC 1100


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 2 YGPPGCGK 9
Y PPG GK
Sbjct: 519 YTPPGAGK 526


>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72

Query: 1 FYGPPGCGKT 10
FYGP GK+
Sbjct: 474 FYGPSDTGKS 483


>sp|R1AB_BYVU|REPLICASE polyprotein 1ab|Beet yellows virus (isolate Ukraine)

Query: 1 FYGPPGCGKT 10
+ PPG GKT
Sbjct: 2247 YEAPPGGGKT 2256


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 2 YGPPGCGK 9
Y PPG GK
Sbjct: 521 YTPPGAGK 528


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b

Query: 2 YGPPGCGK 9
Y PPG GK
Sbjct: 521 YTPPGAGK 528


>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human

Query: 2 YGPPGCGKT 10
+GPP GK+
Sbjct: 439 FGPPNTGKS 447


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 2 YGPPGCGK 9
Y PPG GK
Sbjct: 521 YTPPGAGK 528


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 2 YGPPGCGK 9
Y PPG GK
Sbjct: 521 YTPPGAGK 528


>sp|R1AB_GLRV3|REPLICASE polyprotein 1ab|Grapevine leafroll-associated virus 3 (isolate

Query: 1 FYGPPGCGKT 10
+ PPG GKT
Sbjct: 1934 YNAPPGGGKT 1943


>sp|LT_POVBO|LARGE T antigen|Bovine polyomavirus (BPyV) (Bos taurus

Query: 3 GPPGCGKT 10
GP CGKT
Sbjct: 417 GPVNCGKT 424


>sp|POLN_EEVV|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (VEEV)

Query: 2 YGPPGCGKT 10
YG PG GK+
Sbjct: 720 YGVPGSGKS 728


>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3

Query: 1 FYGPPGCGKT 10
FYGP GK+
Sbjct: 485 FYGPADTGKS 494


>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57

Query: 1 FYGPPGCGKT 10
FYGP GK+
Sbjct: 469 FYGPADTGKS 478


>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27

Query: 1 FYGPPGCGKT 10
FYGP GK+
Sbjct: 469 FYGPADTGKS 478


>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 2 YGPPGCGKT 10
YG PG GK+
Sbjct: 718 YGVPGSGKS 726


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2 YGPPGCGKT 10
YG PG GK+
Sbjct: 720 YGVPGSGKS 728


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2 YGPPGCGKT 10
YG PG GK+
Sbjct: 718 YGVPGSGKS 726


>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a

Query: 1 FYGPPGCGKT 10
FYGP GK+
Sbjct: 469 FYGPADTGKS 478


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2 YGPPGCGKT 10
YG PG GK+
Sbjct: 718 YGVPGSGKS 726


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 2 YGPPGCGKT 10
YG PG GK+
Sbjct: 718 YGVPGSGKS 726


>sp|VE1_MMPV1|REPLICATION protein E1|Macaca mulata papillomavirus 1 (Rhpv

Query: 1 FYGPPGCGKT 10
+GPP GK+
Sbjct: 451 LFGPPNTGKS 460


>sp|PKG1_ADEM1|PACKAGING protein 1|Murine adenovirus A serotype 1

Query: 2 YGPPGCGKT 10
YGP G GK+
Sbjct: 167 YGPTGSGKS 175


>sp|PKG1_ADEG1|PACKAGING protein 1|Fowl adenovirus A serotype 1

Query: 2 YGPPGCGKT 10
YGP G GK+
Sbjct: 150 YGPTGSGKS 158


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2 YGPPGCGKT 10
YG PG GK+
Sbjct: 720 YGVPGSGKS 728


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2 YGPPGCGKT 10
YG PG GK+
Sbjct: 720 YGVPGSGKS 728


>sp|POLG_RHDV3|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 FYGPPGCGKT 10
F G PG GKT
Sbjct: 520 FKGAPGIGKT 529


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 2 YGPPGCGK 9
Y PPG GK
Sbjct: 469 YTPPGVGK 476


Query: 2 YGPPGCGKT 10
+G PG GK+
Sbjct: 1226 HGSPGTGKS 1234


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2 YGPPGCGKT 10
YG PG GK+
Sbjct: 718 YGVPGSGKS 726


>sp|POLG_TMEVD|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 2 YGPPGCGK 9
Y PPG GK
Sbjct: 543 YTPPGAGK 550


>sp|REP_CPBDV|REPLICATION-ASSOCIATED protein|Chaetoceros protobacilladnavirus 2 (Chaetoceros sp

Query: 1 FYGPPGCGKT 10
FYG G GKT
Sbjct: 275 FYGAGGTGKT 284


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2 YGPPGCGKT 10
YG PG GK+
Sbjct: 720 YGVPGSGKS 728


>sp|POLG_RHDVS|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 FYGPPGCGKT 10
F G PG GKT
Sbjct: 520 FKGAPGIGKT 529


>sp|POLG_RHDVF|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 FYGPPGCGKT 10
F G PG GKT
Sbjct: 520 FKGAPGIGKT 529


>sp|POLG_RHDVA|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 FYGPPGCGKT 10
F G PG GKT
Sbjct: 520 FKGAPGIGKT 529


>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)

Query: 2 YGPPGCGKT 10
YG GCGK+
Sbjct: 1552 YGHSGCGKS 1560


>sp|POLG_RHDVB|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 1 FYGPPGCGKT 10
F G PG GKT
Sbjct: 520 FKGAPGIGKT 529


>sp|POLG_EBHSG|GENOME polyprotein|European brown hare syndrome virus

Query: 1 FYGPPGCGKT 10
F G PG GKT
Sbjct: 515 FKGAPGIGKT 524


>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10

Query: 1 FYGPPGCGKT 10
FYGP GK+
Sbjct: 507 FYGPADTGKS 516


>sp|RDRP_RRSVT|RNA-DIRECTED RNA polymerase|Rice ragged stunt virus (isolate

Query: 2 YGPPGC 7
YGP GC
Sbjct: 710 YGPKGC 715


>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29

Query: 1 FYGPPGCGKT 10
FYGP GK+
Sbjct: 486 FYGPADTGKS 495


>sp|POLG_TMEVG|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 2 YGPPGCGK 9
Y PPG GK
Sbjct: 543 YTPPGAGK 550


>sp|R1A_GLRV3|REPLICASE protein 1a|Grapevine leafroll-associated virus 3 (isolate

Query: 1 FYGPPGCGKT 10
+ PPG GKT
Sbjct: 1934 YNAPPGGGKT 1943


>sp|POLG_TMEVB|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 2 YGPPGCGK 9
Y PPG GK
Sbjct: 543 YTPPGAGK 550


>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28

Query: 1 FYGPPGCGKT 10
FYGP GK+
Sbjct: 488 FYGPADTGKS 497


>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 2897 GPPGSGKT 2904


>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 2 YGPPGCGKT 10
+GP CGK+
Sbjct: 826 FGPSHCGKS 834


>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20

Query: 2 YGPPGCGKT 10
+GPP GK+
Sbjct: 432 HGPPNTGKS 440


>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7

Query: 2 YGPPGCGKT 10
+GPP GK+
Sbjct: 431 HGPPNSGKS 439


>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36

Query: 2 YGPPGCGKT 10
+GPP GK+
Sbjct: 431 HGPPNSGKS 439


>sp|POLN_OYMV|NON-STRUCTURAL replication polyprotein|Ononis yellow mosaic virus

Query: 3 GPPGCGKT 10
G PGCGK+
Sbjct: 899 GFPGCGKS 906


>sp|POL1_GCMV|RNA1 polyprotein|Grapevine chrome mosaic virus (GCMV)

Query: 1 FYGPPGCGKT 10
+GP CGK+
Sbjct: 761 LWGPSHCGKS 770


>sp|RFCS1_MIMIV|PUTATIVE replication factor C small|Acanthamoeba polyphaga mimivirus

Query: 3 GPPGCGKT 10
G PG GKT
Sbjct: 45 GSPGVGKT 52


>sp|DDA_BPT4|ATP-DEPENDENT DNA helicase dda|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 GPPGCGKT 10
GP G GKT
Sbjct: 32 GPAGTGKT 39


>sp|VF354_ASFWA|UNCHARACTERIZED protein B354L|African swine fever virus (isolate

Query: 1 FYGPPGCGKT 10
YGP GKT
Sbjct: 28 LYGPSKTGKT 37


>sp|VF354_ASFP4|UNCHARACTERIZED protein B354L|African swine fever virus (isolate

Query: 1 FYGPPGCGKT 10
YGP GKT
Sbjct: 28 LYGPSKTGKT 37


>sp|VF354_ASFM2|UNCHARACTERIZED protein B354L|African swine fever virus (isolate

Query: 1 FYGPPGCGKT 10
YGP GKT
Sbjct: 28 LYGPSKTGKT 37


>sp|VF354_ASFK5|UNCHARACTERIZED protein B354L|African swine fever virus (isolate

Query: 1 FYGPPGCGKT 10
YGP GKT
Sbjct: 28 LYGPSKTGKT 37


>sp|VF354_ASFB7|UNCHARACTERIZED protein B354L|African swine fever virus (strain

Query: 1 FYGPPGCGKT 10
YGP GKT
Sbjct: 28 LYGPSKTGKT 37


>sp|POLN_TYMVC|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus (isolate

Query: 1 FYGPPGCGKT 10
F G GCGKT
Sbjct: 974 FAGFAGCGKT 983


>sp|PKG1_ADES1|PACKAGING protein 1|Snake adenovirus serotype 1 (SnAdV-1)

Query: 2 YGPPGCGKT 10
YGP G GK+
Sbjct: 168 YGPTGSGKS 176


>sp|POLG_BECN1|GENOME polyprotein|Bovine enteric calicivirus Newbury agent-1

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 456 GPPGHGKS 463


>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65

Query: 2 YGPPGCGKT 10
+GPP GK+
Sbjct: 426 HGPPDTGKS 434


>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17

Query: 2 YGPPGCGKT 10
+GPP GK+
Sbjct: 436 HGPPDTGKS 444


>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4

Query: 2 YGPPGCGKT 10
+GPP GK+
Sbjct: 427 HGPPDTGKS 435


>sp|POLN_TYMVA|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus (isolate

Query: 1 FYGPPGCGKT 10
F G GCGKT
Sbjct: 974 FAGFAGCGKT 983


>sp|POLN_TYMV|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus

Query: 1 FYGPPGCGKT 10
F G GCGKT
Sbjct: 974 FAGFAGCGKT 983


>sp|1A_TOBSV|REPLICATION protein 1a|Tobacco streak virus (strain WC)

Query: 3 GPPGCGKT 10
G GCGKT
Sbjct: 806 GVAGCGKT 813


>sp|1A_TAV|REPLICATION protein 1a|Tomato aspermy virus (TAV)

Query: 3 GPPGCGKT 10
G GCGKT
Sbjct: 714 GVAGCGKT 721


>sp|1A_PZSVT|REPLICATION protein 1a|Pelargonium zonate spot virus (isolate

Query: 3 GPPGCGKT 10
G GCGKT
Sbjct: 696 GVAGCGKT 703


>sp|1A_PSVJ|REPLICATION protein 1a|Peanut stunt virus (strain J)

Query: 3 GPPGCGKT 10
G GCGKT
Sbjct: 722 GVAGCGKT 729


>sp|1A_OLV2I|REPLICATION protein 1a|Olive latent virus 2 (isolate

Query: 3 GPPGCGKT 10
G GCGKT
Sbjct: 631 GVAGCGKT 638


>sp|1A_CMVY|REPLICATION protein 1a|Cucumber mosaic virus (strain Y)

Query: 3 GPPGCGKT 10
G GCGKT
Sbjct: 715 GVAGCGKT 722


>sp|1A_CMVQ|REPLICATION protein 1a|Cucumber mosaic virus (strain Q)

Query: 3 GPPGCGKT 10
G GCGKT
Sbjct: 713 GVAGCGKT 720


>sp|1A_CMVO|REPLICATION protein 1a|Cucumber mosaic virus (strain O)

Query: 3 GPPGCGKT 10
G GCGKT
Sbjct: 714 GVAGCGKT 721


>sp|1A_CMVNT|REPLICATION protein 1a|Cucumber mosaic virus (strain NT9)

Query: 3 GPPGCGKT 10
G GCGKT
Sbjct: 714 GVAGCGKT 721




105|Sequence|521|530|GCGKTLLAKA

>sp|LONH_MIMIV|LON protease homolog|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 GCGKTLLAKA 10
G GKTLLAK
Sbjct: 518 GVGKTLLAKG 527


>sp|1A_CMVY|REPLICATION protein 1a|Cucumber mosaic virus (strain Y)

Query: 1 GCGKTLLAKA 10
GCGKT+ K+
Sbjct: 718 GCGKTMPIKS 727


>sp|LOADL_BPT4|SLIDING-CLAMP-LOADER large subunit|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 GCGKTLLAKA 10
G GKT +AKA
Sbjct: 53 GTGKTTVAKA 62


>sp|LOADL_BPR69|SLIDING-CLAMP-LOADER large subunit|Escherichia phage RB69 (Bacteriophage RB69)

Query: 1 GCGKTLLAKA 10
G GKT +AKA
Sbjct: 53 GTGKTTVAKA 62


>sp|NS1_ADVG|INITIATOR protein NS1|Aleutian mink disease parvovirus (strain

Query: 1 GCGKTLLA 8
G GKTLLA
Sbjct: 435 GTGKTLLA 442


>sp|PURZ_BPPMB|N6-SUCCINO-2-AMINO-2'-DEOXYADENYLATE synthase|Salmonella phage PMBT28

Query: 1 GCGKTLLAK 9
GCG ++AK
Sbjct: 132 GCGAAMIAK 140


>sp|G1P_BPIKE|GENE 1 protein|Salmonella phage IKe (Bacteriophage IKe)

Query: 1 GCGKTLLA 8
G GKTL+A
Sbjct: 11 GAGKTLVA 18


>sp|G1P_BPIF1|GENE 1 protein|Escherichia phage If1 (Bacteriophage If1)

Query: 1 GCGKTLLA 8
G GKTL+A
Sbjct: 11 GAGKTLVA 18


>sp|G1P_BPI22|GENE 1 protein|Enterobacteria phage I2-2 (Bacteriophage I2-2)

Query: 1 GCGKTLLA 8
G GKTL+A
Sbjct: 11 GAGKTLVA 18




106|Sequence|526|535|LLAKAIANEC

***** No hits found ******


107|Sequence|531|540|IANECQANFI

>sp|POL1_CPSMV|RNA1 polyprotein|Cowpea severe mosaic virus (strain

Query: 1 IANECQANFI 10
I +C+ANF+
Sbjct: 946 IMEKCKANFV 955


>sp|PRIM_ALHV1|DNA primase|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 ANECQAN 8
AN+CQ+N
Sbjct: 818 ANKCQSN 824


>sp|POL2_CPMVS|RNA2 polyprotein|Cowpea mosaic virus (strain SB)

Query: 1 IANECQANFI 10
++N C A+F+
Sbjct: 395 LSNSCNAHFV 404


>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 NECQANFI 10
NE QANF+
Sbjct: 427 NERQANFL 434


>sp|GAG_SIVMB|GAG polyprotein|Simian immunodeficiency virus (isolate MB66)

Query: 3 NECQANFI 10
NE QANF+
Sbjct: 423 NERQANFL 430


>sp|GAG_HV1J3|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 NECQANFI 10
NE QANF+
Sbjct: 427 NERQANFL 434


>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)

Query: 1 IANECQANFI 10
IAN+ +NF+
Sbjct: 524 IANDVDSNFV 533


>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 IANECQANFI 10
IAN+ +NF+
Sbjct: 524 IANDVDSNFV 533


>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1 IANECQANFI 10
IAN+ +NF+
Sbjct: 524 IANDVDSNFV 533


>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus

Query: 1 IANECQANFI 10
IAN+ +NF+
Sbjct: 524 IANDVDSNFV 533


>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate

Query: 1 IANECQANFI 10
IAN+ +NF+
Sbjct: 524 IANDVDSNFV 533


>sp|RP147_VACCW|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Western Reserve)

Query: 1 IANECQANFI 10
IAN+ +NF+
Sbjct: 524 IANDVDSNFV 533




108|Sequence|536|545|QANFISIKGP

>sp|REP_ICMV|REPLICATION-ASSOCIATED protein|Indian cassava mosaic virus (ICMV)

Query: 2 ANFISIKGP 10
A FIS++GP
Sbjct: 330 ATFISLEGP 338




109|Sequence|541|550|SIKGPELLTM

***** No hits found ******


110|Sequence|546|555|ELLTMWFGES

>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)

Query: 5 MWFGES 10
MWFGE+
Sbjct: 185 MWFGET 190


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 5 MWFGES 10
MWFGE+
Sbjct: 508 MWFGET 513


>sp|RDRP_AMV|RNA-DIRECTED RNA polymerase 2a|Alfalfa mosaic virus (AMV)

Query: 1 ELLTMWF 7
E LT+WF
Sbjct: 558 EFLTLWF 564


>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)

Query: 2 LLTMWFGES 10
L + WFG+S
Sbjct: 10 LFSEWFGQS 18


>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 LLTMWFGES 10
L + WFG+S
Sbjct: 10 LFSEWFGQS 18


>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)

Query: 1 ELLTMWFGES 10
EL +W+GE+
Sbjct: 117 ELDRLWYGET 126


>sp|POL1_CPMVS|RNA1 polyprotein|Cowpea mosaic virus (strain SB)

Query: 3 LTMWFGE 9
+T WFGE
Sbjct: 746 VTCWFGE 752


>sp|IR06_HCMVM|UNCHARACTERIZED protein IRL6|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 LTMWFGES 10
L+ WFGE+
Sbjct: 90 LSRWFGEN 97


>sp|IR06_HCMVA|UNCHARACTERIZED protein IRL6|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 LTMWFGES 10
L+ WFGE+
Sbjct: 90 LSRWFGEN 97




111|Sequence|551|560|WFGESEANVR

>sp|YR476_MIMIV|PUTATIVE AAA family ATPase R476|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 WFGESEANVR 10
W G SE+N+R
Sbjct: 646 WVGGSESNIR 655


>sp|DPOL_HIS1I|DNA polymerase|His1 virus (isolate Australia/Victoria) (His1V)

Query: 1 WFGESEAN 8
W GES+AN
Sbjct: 178 WLGESKAN 185


>sp|ORF4_BFDV|UNCHARACTERIZED protein ORF4|Beak and feather disease virus

Query: 1 WFGESEAN 8
W GE+E N
Sbjct: 90 WLGEAECN 97


>sp|POLG_RGMVD|GENOME polyprotein|Ryegrass mosaic virus (isolate Denmark/Danish)

Query: 3 GESEANVR 10
GES+ NVR
Sbjct: 2840 GESQLNVR 2847


>sp|POLG_RTSVA|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 1 WFGESEANVR 10
W+ + E N R
Sbjct: 3184 WYNDGEVNAR 3193


>sp|HEPA_EHV1V|DNA helicase/primase complex-associated protein|Equine herpesvirus 1

Query: 1 WFGESEA 7
W GESEA
Sbjct: 336 WPGESEA 342


>sp|HEPA_EHV1B|DNA helicase/primase complex-associated protein|Equine herpesvirus 1

Query: 1 WFGESEA 7
W GESEA
Sbjct: 336 WPGESEA 342


>sp|TMP_BPPCD|PROBABLE tape measure protein|Clostridium phage phiCD119 (strain Clostridium

Query: 1 WFGESEANVR 10
WFGE N++
Sbjct: 599 WFGEMWNNIK 608


>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 1 WFGESEANVR 10
W+ + E N R
Sbjct: 3181 WYDDGEVNAR 3190




112|Sequence|556|565|EANVREIFDK

>sp|HEMA_I83A3|HEMAGGLUTININ A virus (strain A/Duck/Ireland/113/1983

Query: 1 EANVREIFDK 10
EANV+ ++DK
Sbjct: 456 EANVKSLYDK 465


>sp|POL1_BBWVS|RNA1 polyprotein|Broad bean wilt virus 1

Query: 2 ANVREIFDK 10
+N R+IFD+
Sbjct: 416 SNARDIFDR 424


>sp|POLG_AEVVR|GENOME polyprotein|Avian encephalomyelitis virus (strain Van

Query: 1 EANVREIFD 9
++N RE+FD
Sbjct: 1347 QSNPREVFD 1355


>sp|POLG_AEVL2|GENOME polyprotein|Avian encephalomyelitis virus (strain L2Z)

Query: 1 EANVREIFD 9
++N RE+FD
Sbjct: 1347 QSNPREVFD 1355


>sp|POLG_AEVCA|GENOME polyprotein|Avian encephalomyelitis virus (strain Calnek

Query: 1 EANVREIFD 9
++N RE+FD
Sbjct: 1347 QSNPREVFD 1355


>sp|HEMA_I83A4|HEMAGGLUTININ A virus (strain A/Turkey/Ireland/1378/1983

Query: 1 EANVREIFDK 10
+ANV+ ++DK
Sbjct: 456 DANVKSLYDK 465


>sp|Y003_OSHVF|UNCHARACTERIZED protein ORF3|Ostreid herpesvirus 1 (isolate France)

Query: 1 EANVREIFD 9
E NVRE+F+
Sbjct: 46 EHNVREMFE 54


>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968

Query: 1 EANVREIFDK 10
++NV+ ++DK
Sbjct: 452 DSNVKNLYDK 461


>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957

Query: 1 EANVREIFDK 10
++NV+ ++DK
Sbjct: 452 DSNVKNLYDK 461


>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957

Query: 1 EANVREIFDK 10
++NV+ ++DK
Sbjct: 452 DSNVKNLYDK 461


>sp|HEMA_I88A4|HEMAGGLUTININ A virus (strain A/Herring

Query: 1 EANVREIFDK 10
++NV+ ++DK
Sbjct: 452 DSNVKNLYDK 461


>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New

Query: 1 EANVREIFDK 10
++NV+ ++DK
Sbjct: 452 DSNVKNLYDK 461


>sp|VF134_ASFWA|EARLY transcription factor large subunit|African swine fever virus

Query: 1 EANVREIFD 9
+ NVR +FD
Sbjct: 326 QINVRNVFD 334


>sp|ETFL_ASFM2|EARLY transcription factor large subunit|African swine fever virus

Query: 1 EANVREIFD 9
+ NVR +FD
Sbjct: 326 QINVRNVFD 334


>sp|ETFL_ASFK5|EARLY transcription factor large subunit|African swine fever virus

Query: 1 EANVREIFD 9
+ NVR +FD
Sbjct: 326 QINVRNVFD 334


>sp|ETFL_ASFB7|EARLY transcription factor large subunit|African swine fever virus

Query: 1 EANVREIFD 9
+ NVR +FD
Sbjct: 326 QINVRNVFD 334


>sp|EFTL_ASFP4|EARLY transcription factor large subunit|African swine fever virus

Query: 1 EANVREIFD 9
+ NVR +FD
Sbjct: 326 QINVRNVFD 334




113|Sequence|561|570|EIFDKARQAA

>sp|TMP_BPPAJ|TAPE measure protein|Pseudomonas phage PAJU2

Query: 1 EIFDKARQAA 10
EI DKARQA
Sbjct: 615 EILDKARQAG 624


>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)

Query: 1 EIFDKARQAA 10
EIFDK+R A
Sbjct: 344 EIFDKSRAYA 353


>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 EIFDKARQAA 10
EIFDK+R A
Sbjct: 344 EIFDKSRAYA 353




114|Sequence|566|575|ARQAAPCVLF

>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1 ARQAAPCVL 9
AR +APC L
Sbjct: 407 ARTSAPCSL 415


>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1 ARQAAPCVL 9
AR +APC L
Sbjct: 407 ARTSAPCSL 415


>sp|TEG7_HHV11|TEGUMENT protein UL51|Human herpesvirus 1 (strain 17)

Query: 3 QAAPCVL 9
+AAPCVL
Sbjct: 236 RAAPCVL 242




115|Sequence|571|580|PCVLFFDELD

>sp|LONH_MIMIV|LON protease homolog|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 VLFFDELD 10
V+FFDE+D
Sbjct: 578 VMFFDEVD 585


>sp|POLG_SVV1|GENOME polyprotein|Seneca Valley virus (isolate -/United

Query: 1 PCVLFF 6
PC+LFF
Sbjct: 646 PCILFF 651


>sp|RDRP_TCV|RNA-DIRECTED RNA polymerase|Turnip crinkle virus (TCV)

Query: 2 CVLFF--DELD 10
CVLFF DE+D
Sbjct: 574 CVLFFEADEVD 584


>sp|PAP_PSHV1|DNA polymerase processivity factor|Psittacid herpesvirus 1 (isolate

Query: 2 CVLFFD--ELD 10
C+LFFD E+D
Sbjct: 357 CILFFDSEEMD 367


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1 PCVLFFDEL 9
PC+ F DE+
Sbjct: 96 PCLSFLDEI 104


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 1 PCVLFFDEL 9
PC+ F DE+
Sbjct: 96 PCLSFLDEI 104


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 1 PCVLFFDE 8
PC+L DE
Sbjct: 2354 PCLLLLDE 2361


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 1 PCVLFFDE 8
PC+L DE
Sbjct: 2354 PCLLLLDE 2361


>sp|Y529_ATV|UNCHARACTERIZED protein ORF529|Acidianus two-tailed virus (ATV)

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 170 PTIVFMDEVD 179


>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)

Query: 1 PCVLFFDEL 9
PC + F+EL
Sbjct: 196 PCAVCFEEL 204


>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)

Query: 1 PCVLFFDEL 9
PC + F+EL
Sbjct: 196 PCAVCFEEL 204


>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)

Query: 1 PCVLFFDEL 9
PC + F+EL
Sbjct: 200 PCAVCFEEL 208


>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)

Query: 1 PCVLFFDEL 9
PC + F+EL
Sbjct: 195 PCAVCFEEL 203


>sp|POLG_PVYO|GENOME polyprotein|Potato virus Y (strain O)

Query: 5 FFDELD 10
FFDE+D
Sbjct: 505 FFDEID 510


>sp|YL021_MIMIV|PUTATIVE sel1-like repeat-containing protein L21|Acanthamoeba polyphaga

Query: 2 CVLFFDELD 10
C L FDE++
Sbjct: 501 CELMFDEIE 509


>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 2 CVLFFDEL 9
C L FDE+
Sbjct: 5737 CTLIFDEV 5744


>sp|PRTP_HHV2|PROCESSING and transport protein|Human herpesvirus 2 (HHV-2) (Human

Query: 1 PCVLFFDEL 9
PC + F+EL
Sbjct: 200 PCAVCFEEL 208


>sp|YL575_MIMIV|UNCHARACTERIZED protein L575|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PCVLFFDE 8
P VLFFD+
Sbjct: 250 PSVLFFDK 257


>sp|ORF1_ADES1|PROTEIN ORF1|Snake adenovirus serotype 1 (SnAdV-1)

Query: 1 PCVLFFDE 8
PC LF+D
Sbjct: 89 PCRLFYDR 96




116|Sequence|576|585|FDELDSIAKA

>sp|POLG_PEMVC|GENOME polyprotein|Pepper mottle virus (isolate California)

Query: 1 FDELDSIAK 9
F+E+DSI K
Sbjct: 2614 FEEIDSICK 2622


>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 FDELDSIAK 9
FD++DSI K
Sbjct: 460 FDKIDSIIK 468


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 FDELDSIAK 9
FD LDSI +
Sbjct: 2096 FDNLDSIGQ 2104




117|Sequence|581|590|SIAKARGGNI

>sp|RIR1_EHV1B|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Equine herpesvirus 1 (strain Ab4p)

Query: 2 IAKARGGNI 10
+AK RGG I
Sbjct: 145 LAKMRGGRI 153




118|Sequence|586|595|RGGNIGDGGG

>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49

Query: 1 RGGNIGDG 8
RGGN+GD
Sbjct: 264 RGGNVGDA 271


>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37

Query: 1 RGGNIGDG 8
RGGN+GD
Sbjct: 264 RGGNVGDA 271


>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17

Query: 1 RGGNIGDG 8
RGGN+GD
Sbjct: 264 RGGNVGDA 271


>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65

Query: 2 GGNIGDGGG 10
GGN DGGG
Sbjct: 135 GGNSQDGGG 143


>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9

Query: 1 RGGNIGDG 8
RGG++GD
Sbjct: 264 RGGSVGDA 271


>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P

Query: 2 GGNIGDGG 9
G +IGDGG
Sbjct: 859 GHDIGDGG 866


>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human

Query: 1 RGGNIGD 7
RGG++GD
Sbjct: 267 RGGSVGD 273


>sp|KITH_EHV2|THYMIDINE kinase|Equine herpesvirus 2 (strain 86/87)

Query: 4 NIGDGGG 10
++GDGGG
Sbjct: 34 SLGDGGG 40


>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57

Query: 1 RGGNIGDG 8
RGG++GD
Sbjct: 276 RGGSMGDA 283


>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 1 RGGNIGDGG 9
RG N G GG
Sbjct: 348 RGANFGMGG 356


>sp|SCAF_PSHV1|CAPSID scaffolding protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 RGGNIGDGG 9
RGG+ GDG
Sbjct: 473 RGGSSGDGA 481


>sp|VF407_ASFWA|UNCHARACTERIZED protein B407L|African swine fever virus (isolate

Query: 1 RGGNIGDG 8
R GNI DG
Sbjct: 135 RSGNIRDG 142


>sp|VF407_ASFP4|UNCHARACTERIZED protein B407L|African swine fever virus (isolate

Query: 1 RGGNIGDG 8
R GNI DG
Sbjct: 135 RSGNIRDG 142




119|Sequence|591|600|GDGGGAADRV

>sp|ENV_AVIRE|ENVELOPE glycoprotein|Avian reticuloendotheliosis virus

Query: 2 DGGGAADR 9
DGGG DR
Sbjct: 183 DGGGPTDR 190


>sp|ENV_SRV1|ENVELOPE glycoprotein|Simian retrovirus SRV-1

Query: 2 DGGGAADRV 10
DGGG D+V
Sbjct: 177 DGGGPQDKV 185


>sp|VPX_SIVVT|PROTEIN Vpx|Simian immunodeficiency virus agm.vervet (isolate

Query: 1 GDGGGAADRV 10
G GGG A+RV
Sbjct: 105 GQGGGRANRV 114


>sp|LTP_MUHVK|LARGE tegument protein deneddylase|Murid herpesvirus 1 (strain K181)

Query: 1 GDGGGAADR 9
G GG ADR
Sbjct: 1047 GSAGGGADR 1055


>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 DGGGAADRV 10
DGGG DR+
Sbjct: 105 DGGGDEDRL 113


>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 DGGGAADRV 10
DGGG DR+
Sbjct: 105 DGGGDEDRL 113


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 2 DGGGAADRV 10
D GGAA+R+
Sbjct: 1517 DDGGAAERM 1525


>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 DGGGAADRV 10
D GGAA+R+
Sbjct: 1544 DDGGAAERM 1552


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 2 DGGGAADRV 10
D GGAA+R+
Sbjct: 1522 DDGGAAERM 1530


>sp|VPX_SIVVG|PROTEIN Vpx|Simian immunodeficiency virus agm.vervet (isolate

Query: 1 GDGGGAADRV 10
G GGG A RV
Sbjct: 105 GQGGGRAGRV 114


>sp|KITH_EHV2|THYMIDINE kinase|Equine herpesvirus 2 (strain 86/87)

Query: 1 GDGGGA 6
GDGGG+
Sbjct: 36 GDGGGS 41


>sp|ENV_SMRVH|ENVELOPE glycoprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 2 DGGGAADRV 10
DGGG D V
Sbjct: 180 DGGGPQDAV 188


>sp|FUS_ISAV8|FUSION glycoprotein F0|Infectious salmon anemia virus (isolate

Query: 1 GDGGGAADRV 10
GDG +AD V
Sbjct: 299 GDGAASADDV 308


>sp|ENV_AVISN|ENVELOPE glycoprotein|Avian spleen necrosis virus

Query: 2 DGGGAADRV 10
DGGG D +
Sbjct: 186 DGGGPTDMI 194


>sp|DNBI_PSHV1|MAJOR DNA-binding protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 DGGGAAD 8
DGG AAD
Sbjct: 395 DGGAAAD 401




120|Sequence|596|605|AADRVINQIL

***** No hits found ******


121|Sequence|601|610|INQILTEMDG

>sp|YR476_MIMIV|PUTATIVE AAA family ATPase R476|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 INQILTEMDG 10
+NQ L EMDG
Sbjct: 702 VNQFLAEMDG 711


>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 2 NQILTEMDG 10
NQIL +DG
Sbjct: 467 NQILVVLDG 475


>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)

Query: 2 NQILTEMDG 10
NQIL +DG
Sbjct: 467 NQILVVLDG 475


>sp|TMP_BPPCD|PROBABLE tape measure protein|Clostridium phage phiCD119 (strain Clostridium

Query: 1 INQILTEMDG 10
+N+IL MDG
Sbjct: 286 LNEILNLMDG 295




122|Sequence|606|615|TEMDGMSTKK

***** No hits found ******


123|Sequence|611|620|MSTKKNVFII

>sp|POLG_SPMMV|GENOME polyprotein|Sweet potato mild mottle virus

Query: 3 TKKNVFI 9
TKKN FI
Sbjct: 1203 TKKNAFI 1209


>sp|GM_ALHV1|ENVELOPE glycoprotein M|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 STKKNVFII 10
S+KK++FI+
Sbjct: 3 SSKKDIFIL 11




124|Sequence|616|625|NVFIIGATNR

>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 3 FIIGATNR 10
F++GATN+
Sbjct: 2103 FVVGATNQ 2110


>sp|MU2_REOVJ|MICROTUBULE-ASSOCIATED protein mu-2|Reovirus type 2 (strain D5/Jones)

Query: 1 NVFIIGATNR 10
N+++ G TNR
Sbjct: 384 NIYVSGFTNR 393


>sp|IE1_NPVAC|TRANS-ACTIVATING transcriptional regulatory protein|Autographa californica nuclear

Query: 1 NVFIIGATNR 10
++F+IG NR
Sbjct: 528 HMFVIGKVNR 537




125|Sequence|621|630|GATNRPDIID

>sp|YL291_MIMIV|UNCHARACTERIZED protein L291|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 GATNRPDIID 10
G ++PDIID
Sbjct: 274 GGKSKPDIID 283


>sp|YO12_BPHC1|UNCHARACTERIZED 18.2 kDa protein in|Haemophilus phage HP1 (strain HP1c1)

Query: 2 ATNRPDII 9
A N+PD+I
Sbjct: 45 AKNKPDVI 52


>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)

Query: 3 TNRPDI 8
TNRPD+
Sbjct: 490 TNRPDL 495


>sp|YL872_MIMIV|UNCHARACTERIZED protein L872|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 TNRPDII 9
TNRPD +
Sbjct: 164 TNRPDYV 170


>sp|PG114_MONPV|CORE protein OPG114|Monkeypox virus (MPXV)

Query: 4 NRPDII 9
NRPD+I
Sbjct: 70 NRPDVI 75


>sp|PG114_VARV|CORE protein D2|Variola virus

Query: 4 NRPDII 9
NRPD+I
Sbjct: 70 NRPDVI 75


>sp|PG114_VAR67|CORE protein D2|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 4 NRPDII 9
NRPD+I
Sbjct: 70 NRPDVI 75




126|Sequence|626|635|PDIIDPAILR

>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 1 PDIIDPAIL 9
PD+IDP+I+
Sbjct: 445 PDLIDPSII 453


>sp|L_DMSVA|RNA-DIRECTED RNA polymerase L|Drosophila melanogaster sigma virus (isolate

Query: 1 PDIIDPAIL 9
PD+IDP++L
Sbjct: 456 PDVIDPSLL 464


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 1 PDIIDPAIL 9
PD+IDP+I+
Sbjct: 446 PDLIDPSII 454


>sp|L_TUPVT|RNA-DIRECTED RNA polymerase L|Tupaia virus (isolate Tupaia/Thailand/-/1986)

Query: 1 PDIIDPAIL 9
PD++DPA++
Sbjct: 452 PDLVDPALI 460


>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 1 PDIIDPAIL 9
PD+IDP+++
Sbjct: 456 PDLIDPSVI 464


>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 1 PDIIDPAIL 9
PD+IDP+++
Sbjct: 456 PDLIDPSVI 464


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 PDIIDPAIL 9
PD++DP+I+
Sbjct: 456 PDLLDPSII 464


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 PDIIDPAIL 9
PD++DP+I+
Sbjct: 456 PDLLDPSII 464


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 PDIIDPAIL 9
PD++DP+I+
Sbjct: 456 PDLLDPSII 464


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 PDIIDPAIL 9
PD++DP+I+
Sbjct: 456 PDLLDPSII 464


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1 PDIIDPAIL 9
PD++DP+I+
Sbjct: 456 PDLLDPSII 464


>sp|L_SVCV|RNA-DIRECTED RNA polymerase L|Spring viremia of carp virus

Query: 1 PDIIDPAIL 9
PD++DP+++
Sbjct: 445 PDLLDPSVI 453


>sp|Y022_OSHVF|UNCHARACTERIZED protein ORF22|Ostreid herpesvirus 1 (isolate France)

Query: 2 DIIDPAIL 9
D++DPA+L
Sbjct: 1211 DVLDPAVL 1218


>sp|GLYCO_LNYV3|GLYCOPROTEIN necrotic yellows virus (isolate

Query: 2 DIIDPAILR 10
DI+DP LR
Sbjct: 444 DIVDPTELR 452


>sp|YL572_MIMIV|PUTATIVE AAA family ATPase L572|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 DIIDPAILR 10
+++DPA++R
Sbjct: 120 EVLDPALIR 128


>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV

Query: 4 IDPAILR 10
+DPA+LR
Sbjct: 128 VDPALLR 134


>sp|RPOA_EAVBU|REPLICASE polyprotein 1ab|Equine arteritis virus (strain Bucyrus)

Query: 4 IDPAILR 10
+DPA+LR
Sbjct: 808 VDPALLR 814




127|Sequence|631|640|PAILRPGRLD

>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)

Query: 1 PAILRPGRL 9
PA+L PGR+
Sbjct: 378 PAVLTPGRM 386


>sp|NCAP_DUGBV|NUCLEOPROTEIN virus

Query: 1 PAILRPGRL 9
PA+L PGR+
Sbjct: 377 PAVLTPGRM 385


>sp|YL572_MIMIV|PUTATIVE AAA family ATPase L572|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PAILRPGRLD 10
PA++R GR+D
Sbjct: 124 PALIRRGRID 133


>sp|POL1_BAYMY|GENOME polyprotein 1|Barley yellow mosaic virus (isolate

Query: 1 PAILRP 6
PAILRP
Sbjct: 1447 PAILRP 1452


>sp|POL1_BAYMJ|GENOME polyprotein 1|Barley yellow mosaic virus (strain

Query: 1 PAILRP 6
PAILRP
Sbjct: 1447 PAILRP 1452


>sp|POL1_BAYMG|GENOME polyprotein 1|Barley yellow mosaic virus (isolate

Query: 1 PAILRP 6
PAILRP
Sbjct: 1447 PAILRP 1452


>sp|PG096_VACCW|PROTEIN OPG096|Vaccinia virus (strain Western Reserve)

Query: 1 PAILRP 6
PAILRP
Sbjct: 34 PAILRP 39


>sp|PG096_VACCC|PROTEIN OPG096|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 PAILRP 6
PAILRP
Sbjct: 34 PAILRP 39


>sp|PG096_VACCA|PROTEIN OPG096|Vaccinia virus (strain Ankara) (VACV)

Query: 1 PAILRP 6
PAILRP
Sbjct: 34 PAILRP 39


>sp|PG096_VARV|PROTEIN OPG096|Variola virus

Query: 1 PAILRP 6
PAILRP
Sbjct: 34 PAILRP 39


>sp|PG096_VAR67|PROTEIN OPG096|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 PAILRP 6
PAILRP
Sbjct: 34 PAILRP 39


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 PAILRPGRL 9
PAIL PG L
Sbjct: 1884 PAILSPGAL 1892


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 PAILRPGRL 9
PAIL PG L
Sbjct: 1884 PAILSPGAL 1892


>sp|PG096_MONPV|PROTEIN OPG096|Monkeypox virus (MPXV)

Query: 1 PAILRP 6
PAILRP
Sbjct: 34 PAILRP 39


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 PAILRPGRL 9
PAIL PG L
Sbjct: 1884 PAILSPGAL 1892


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 PAILRPGRL 9
PAIL PG L
Sbjct: 1884 PAILSPGAL 1892


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1 PAILRPGRL 9
PAIL PG L
Sbjct: 1884 PAILSPGAL 1892


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 PAILRPGRL 9
PAIL PG L
Sbjct: 1884 PAILSPGAL 1892


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 PAILRPGRL 9
PAIL PG L
Sbjct: 1888 PAILSPGAL 1896


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 PAILRPGRL 9
PAIL PG L
Sbjct: 1884 PAILSPGAL 1892


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 1 PAILRPGRL 9
PAIL PG L
Sbjct: 1892 PAILSPGAL 1900


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 PAILRPGRL 9
PAIL PG L
Sbjct: 1890 PAILSPGAL 1898


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 PAILRPGRL 9
PAIL PG L
Sbjct: 1888 PAILSPGAL 1896


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 PAILRPGRL 9
PAIL PG L
Sbjct: 1884 PAILSPGAL 1892


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 1 PAILRPGRL 9
PAIL PG L
Sbjct: 1884 PAILSPGAL 1892


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1 PAILRPGRL 9
PAIL PG L
Sbjct: 1884 PAILSPGAL 1892


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1 PAILRPGRL 9
PAIL PG L
Sbjct: 1884 PAILSPGAL 1892


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1 PAILRPGRL 9
PAIL PG L
Sbjct: 1884 PAILSPGAL 1892


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 PAILRPGRL 9
PAIL PG L
Sbjct: 1884 PAILSPGAL 1892


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 1 PAILRPGRL 9
PAIL PG L
Sbjct: 1889 PAILSPGAL 1897


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 1 PAILRPGRL 9
PAIL PG L
Sbjct: 1888 PAILSPGAL 1896


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 PAILRPGRL 9
PAIL PG L
Sbjct: 1890 PAILSPGAL 1898


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 1 PAILRPGRL 9
PA+L PG L
Sbjct: 1885 PALLSPGAL 1893


>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)

Query: 2 AILRPGRL 9
AIL+PG L
Sbjct: 21 AILKPGEL 28


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 1 PAILRPGRL 9
PA+L PG L
Sbjct: 1889 PALLSPGAL 1897


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1 PAILRPGRL 9
PA+L PG L
Sbjct: 1889 PALLSPGAL 1897


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 1 PAILRPGRL 9
PA+L PG L
Sbjct: 1886 PALLSPGAL 1894


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 1 PAILRPGRL 9
PA+L PG L
Sbjct: 1882 PALLSPGAL 1890


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 1 PAILRPGRL 9
PA+L PG L
Sbjct: 1888 PALLSPGAL 1896


>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 AILRPGRL 9
AIL+PG L
Sbjct: 21 AILKPGEL 28


>sp|POL_RSVP|GAG-POL polyprotein|Rous sarcoma virus subgroup C

Query: 2 AILRPGRL 9
A+LRPG L
Sbjct: 361 ALLRPGEL 368


>sp|POL_RSVSB|GAG-POL polyprotein|Rous sarcoma virus subgroup B

Query: 2 AILRPGRL 9
A+LRPG L
Sbjct: 361 ALLRPGEL 368


>sp|GAG_AVIMC|GAG polyprotein|Avian myelocytomatosis virus 29 (Avian

Query: 2 AILRPGRL 9
A+LRPG L
Sbjct: 361 ALLRPGEL 368


>sp|POL_ALVA|GAG-POL polyprotein|Avian leukosis virus subgroup A

Query: 2 AILRPGRL 9
A+LRPG L
Sbjct: 361 ALLRPGEL 368


>sp|POL_ALV|GAG-POL polyprotein|Avian leukosis virus (ALV)

Query: 2 AILRPGRL 9
A+LRPG L
Sbjct: 361 ALLRPGEL 368


>sp|GAG_AVIMD|GAG polyprotein|Avian myelocytomatosis virus HBI

Query: 2 AILRPGRL 9
A+LRPG L
Sbjct: 361 ALLRPGEL 368


>sp|YL116_MIMIV|UNCHARACTERIZED protein L116|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PAILRPG 7
PAI++PG
Sbjct: 460 PAIIKPG 466




128|Sequence|636|645|PGRLDQLIYI

>sp|GAG_AVISN|GAG polyprotein|Avian spleen necrosis virus

Query: 1 PGRLDQLIYI 10
PG DQ+IYI
Sbjct: 76 PGHPDQVIYI 85


>sp|VIF_HV197|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 PGRLDQLIYI 10
PG DQLI+I
Sbjct: 100 PGLADQLIHI 109


>sp|VIF_HV193|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 PGRLDQLIYI 10
PG DQLI+I
Sbjct: 100 PGLADQLIHI 109


>sp|VIF_HV1VI|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 PGRLDQLIYI 10
PG DQLI+I
Sbjct: 100 PGLADQLIHI 109


>sp|YR713_MIMIV|UNCHARACTERIZED protein R713|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PGRLDQLIY 9
P LDQLIY
Sbjct: 585 PDILDQLIY 593


>sp|VP2_AHSV3|OUTER capsid protein VP2|African horse sickness virus 3

Query: 2 GRLDQLIYI 10
GRLD+LI I
Sbjct: 1028 GRLDRLILI 1036


>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 PGRLDQLIYI 10
PG DQLI++
Sbjct: 100 PGLADQLIHL 109


>sp|VIF_HV1Z2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 PGRLDQLIYI 10
PG DQLI++
Sbjct: 100 PGLADQLIHM 109


>sp|VIF_HV1ND|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 PGRLDQLIYI 10
PG DQLI++
Sbjct: 100 PGLADQLIHM 109


>sp|VIF_HV192|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 PGRLDQLIYI 10
PG DQLI++
Sbjct: 100 PGLADQLIHM 109


>sp|VIF_HV1M2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 PGRLDQLIYI 10
PG DQLI++
Sbjct: 101 PGLADQLIHL 110


>sp|VIF_HV190|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 PGRLDQLIYI 10
PG DQLI++
Sbjct: 100 PGLADQLIHM 109


>sp|VIF_HV1Z6|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 PGRLDQLIYI 10
PG DQLI++
Sbjct: 100 PGLADQLIHM 109


>sp|VIF_HV1EL|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 PGRLDQLIYI 10
PG DQLI++
Sbjct: 100 PGLADQLIHM 109


>sp|VIF_HV1S2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 PGRLDQLIYI 10
PG DQLI++
Sbjct: 100 PGLADQLIHM 109


>sp|VIF_HV1S9|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 PGRLDQLIYI 10
PG DQLI++
Sbjct: 100 PGLADQLIHM 109


>sp|YO08_BPS2|UNCHARACTERIZED 10.8 kDa protein in|Haemophilus phage S2 (Bacteriophage S2)

Query: 1 PGRLDQLIY 9
P LD+LIY
Sbjct: 47 PSLLDKLIY 55


>sp|YO08_BPHC1|UNCHARACTERIZED 10.8 kDa protein in|Haemophilus phage HP1 (strain HP1c1)

Query: 1 PGRLDQLIY 9
P LD+LIY
Sbjct: 47 PSLLDKLIY 55


>sp|VIF_HV1OY|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 PGRLDQLIY 9
PG DQLI+
Sbjct: 100 PGLADQLIH 108


>sp|POLG_TVMV|GENOME polyprotein|Tobacco vein mottling virus (TVMV)

Query: 1 PGRLDQLIYI 10
PG + L+YI
Sbjct: 602 PGEISNLMYI 611


>sp|MVP_TVMV|P3N-PIPO polyprotein|Tobacco vein mottling virus (TVMV)

Query: 1 PGRLDQLIYI 10
PG + L+YI
Sbjct: 602 PGEISNLMYI 611


>sp|PHOSP_DMSVA|PHOSPHOPROTEIN melanogaster sigma virus (isolate

Query: 2 GRLDQLIYI 10
GR+ Q++YI
Sbjct: 134 GRVTQMVYI 142


>sp|Y158_ABVP|UNCHARACTERIZED protein ORF158|Acidianus bottle-shaped virus (isolate

Query: 4 LDQLIYI 10
LD+LIYI
Sbjct: 91 LDELIYI 97


>sp|VP1_AQRVC|OUTER capsid protein VP1|Aquareovirus C (isolate Golden

Query: 1 PGRLDQLIY 9
P R+DQ++Y
Sbjct: 351 PYRVDQILY 359




129|Sequence|641|650|QLIYIPLPDE

>sp|L_SYNV|RNA-DIRECTED RNA polymerase L|Sonchus yellow net virus (SYNV)

Query: 4 YIPLPDE 10
++PLPDE
Sbjct: 1271 FLPLPDE 1277


>sp|Y146_HVAVE|PUTATIVE structural protein ORF146|Heliothis virescens ascovirus 3e

Query: 3 IYIPLPDE 10
+Y+P PDE
Sbjct: 206 VYVPEPDE 213


>sp|UL79_ELHVK|PROTEIN U52|Elephantid herpesvirus 1 (isolate Asian

Query: 3 IYIPLPD 9
+Y+PLPD
Sbjct: 157 LYVPLPD 163


>sp|POL1_CPMVS|RNA1 polyprotein|Cowpea mosaic virus (strain SB)

Query: 1 QLIYIPLP 8
Q +YIPLP
Sbjct: 1182 QGVYIPLP 1189


>sp|YR253_MIMIV|UNCHARACTERIZED protein R253|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 IPLPDE 10
+PLPDE
Sbjct: 19 VPLPDE 24


>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)

Query: 3 IYIPLPDE 10
+Y+P PDE
Sbjct: 378 LYVPAPDE 385


>sp|L_NDVB1|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Chicken/United

Query: 1 QLIYIPLPDE 10
+L +PLPDE
Sbjct: 34 KLTGLPLPDE 43


>sp|L_NDVB|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Beaudette

Query: 1 QLIYIPLPDE 10
+L +PLPDE
Sbjct: 34 KLTGLPLPDE 43


>sp|POL1_RCMV|RNA1 polyprotein|Red clover mottle virus (RCMV)

Query: 3 IYIPLPDE 10
+YIPLP +
Sbjct: 1180 LYIPLPKK 1187


>sp|CAPSD_TASV2|CAPSID polyprotein VP90|Turkey astrovirus 2 (TAstV-2)

Query: 3 IYIPLP 8
IY+PLP
Sbjct: 424 IYLPLP 429


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3 IYIPLPD 9
+Y+P PD
Sbjct: 5219 VYLPYPD 5225


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3 IYIPLPD 9
+Y+P PD
Sbjct: 5196 VYLPYPD 5202


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 3 IYIPLPD 9
+Y+P PD
Sbjct: 5283 VYLPYPD 5289


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 3 IYIPLPD 9
+Y+P PD
Sbjct: 5277 VYLPYPD 5283


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 3 IYIPLPD 9
+Y+P PD
Sbjct: 5225 VYLPYPD 5231


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 3 IYIPLPD 9
+Y+P PD
Sbjct: 5230 VYLPYPD 5236


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 3 IYIPLPD 9
+Y+P PD
Sbjct: 5250 VYLPYPD 5256


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 3 IYIPLPD 9
+Y+P PD
Sbjct: 5280 VYLPYPD 5286


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 3 IYIPLPD 9
+Y+P PD
Sbjct: 5192 VYLPYPD 5198


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 3 IYIPLPD 9
+Y+P PD
Sbjct: 5192 VYLPYPD 5198


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 3 IYIPLPD 9
+Y+P PD
Sbjct: 5192 VYLPYPD 5198


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 3 IYIPLPD 9
+Y+P PD
Sbjct: 5194 VYLPYPD 5200


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 3 IYIPLPD 9
+Y+P PD
Sbjct: 5190 VYLPYPD 5196


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 3 IYIPLPD 9
+Y+P PD
Sbjct: 5202 VYLPYPD 5208


>sp|POL1_BPMV|RNA1 polyprotein|Bean-pod mottle virus (strain Kentucky

Query: 3 IYIPLP 8
+Y+PLP
Sbjct: 1169 VYVPLP 1174


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 3 IYIPLPD 9
+Y+P PD
Sbjct: 5060 VYLPYPD 5066


>sp|Y137_AFV1Y|UNCHARACTERIZED protein ORF137|Acidianus filamentous virus 1 (isolate

Query: 4 YIPLPDE 10
YIP+PD+
Sbjct: 93 YIPVPDK 99


>sp|V010_FOWPN|UNCHARACTERIZED serpin-like protein FPV010|Fowlpox virus (strain NVSL) (FPV)

Query: 4 YIPLPDE 10
Y+P+PD+
Sbjct: 54 YVPIPDK 60


>sp|SCAF_ELHVK|CAPSID scaffolding protein|Elephantid herpesvirus 1 (isolate Asian

Query: 4 YIPLPDE 10
Y+PLP E
Sbjct: 376 YLPLPGE 382




130|Sequence|646|655|PLPDEKSRVA

>sp|YR253_MIMIV|UNCHARACTERIZED protein R253|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PLPDEKS 7
PLPDE+S
Sbjct: 20 PLPDEQS 26


>sp|NSP1_ROTSF|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/SA11-FEM/G3P6[1]) (RV-A)

Query: 1 PLPDEK 6
P+PDEK
Sbjct: 32 PVPDEK 37


>sp|NSP1_ROTS1|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/SA11-Both/G3P5B[2]) (RV-A)

Query: 1 PLPDEK 6
P+PDEK
Sbjct: 32 PVPDEK 37


>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate

Query: 2 LPDEKSR 8
LPDEKS+
Sbjct: 280 LPDEKSQ 286




131|Sequence|651|660|KSRVAILKAN

>sp|AIMR_BPPHT|AIMR transcriptional regulator|Bacillus phage phi3T (Bacteriophage

Query: 1 KSRVAILKAN 10
KSRV++L+AN
Sbjct: 186 KSRVSMLEAN 195




132|Sequence|656|665|ILKANLRKSP

***** No hits found ******


133|Sequence|661|670|LRKSPVAKDV

***** No hits found ******


134|Sequence|666|675|VAKDVDLEFL

>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse

Query: 1 VAKDVDLEFL 10
VAKD+D++ L
Sbjct: 21 VAKDIDVDLL 30


>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United

Query: 1 VAKDVDLEFL 10
VAKD+D++ L
Sbjct: 21 VAKDIDVDLL 30


>sp|VT4_SHEVN|T4 protein|Sheeppox virus (strain InS-1) (SPPV)

Query: 3 KDVDLEFL 10
KD DLEF+
Sbjct: 150 KDYDLEFV 157


>sp|VT4_SHEVK|T4 protein|Sheeppox virus (strain KS-1) (SPPV)

Query: 3 KDVDLEFL 10
KD DLEF+
Sbjct: 150 KDYDLEFV 157


>sp|BPPB3_BPT5|BASEPLATE hub protein pb3|Escherichia phage T5 (Enterobacteria phage

Query: 1 VAKDVDLEF 9
V K+VDL+F
Sbjct: 249 VTKEVDLDF 257


>sp|POLS_SAV3|STRUCTURAL polyprotein|Alphavirus salmon subtype 3 (SAV3)

Query: 1 VAKDVDLE 8
VA+D+DLE
Sbjct: 176 VAEDMDLE 183


>sp|POLS_SAV1|STRUCTURAL polyprotein|Alphavirus salmon subtype 1 (SAV1)

Query: 1 VAKDVDLE 8
VA+D+DLE
Sbjct: 177 VAEDMDLE 184


>sp|POLG_FMDVT|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 VAKDVDLEF 9
VA D DL+F
Sbjct: 2199 VASDYDLDF 2207


>sp|POLG_FMDVS|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 VAKDVDLEF 9
VA D DL+F
Sbjct: 2199 VASDYDLDF 2207


>sp|POLG_FMDVI|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 VAKDVDLEF 9
VA D DL+F
Sbjct: 2200 VASDYDLDF 2208


>sp|POLG_FMDVC|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 VAKDVDLEF 9
VA D DL+F
Sbjct: 2205 VASDYDLDF 2213


>sp|POLG_FMDVA|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 VAKDVDLEF 9
VA D DL+F
Sbjct: 2205 VASDYDLDF 2213


>sp|POLG_FMDV5|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 VAKDVDLEF 9
VA D DL+F
Sbjct: 2204 VASDYDLDF 2212


>sp|POLG_FMDA1|GENOME polyprotein|Foot-and-mouth disease virus serotype Asia-1

Query: 1 VAKDVDLEF 9
VA D DL+F
Sbjct: 2201 VASDYDLDF 2209


>sp|POLG_FMDVZ|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 VAKDVDLEF 9
VA D DL+F
Sbjct: 2205 VASDYDLDF 2213


>sp|POLG_FMDVO|GENOME polyprotein|Foot-and-mouth disease virus serotype O

Query: 1 VAKDVDLEF 9
VA D DL+F
Sbjct: 2204 VASDYDLDF 2212


>sp|POLG_FMDV1|GENOME polyprotein|Foot-and-mouth disease virus (strain A10/Holland/1961

Query: 1 VAKDVDLEF 9
VA D DL+F
Sbjct: 2204 VASDYDLDF 2212


>sp|POLG_FMDS2|GENOME polyprotein|Foot-and-mouth disease virus serotype SAT-2

Query: 1 VAKDVDLEF 9
VA D DL+F
Sbjct: 2207 VASDYDLDF 2215


>sp|POLG_FMDVP|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 VAKDVDLEF 9
VA D DL+F
Sbjct: 2194 VASDYDLDF 2202




135|Sequence|671|680|DLEFLAKMTN

>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 DLEFLAKMTN 10
DL+FL+ +TN
Sbjct: 2079 DLDFLSSLTN 2088


>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 DLEFLAKMTN 10
DL+FL+ +TN
Sbjct: 2096 DLDFLSSLTN 2105


>sp|DPOL_ICHVA|DNA polymerase|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 EFLAKMTN 10
EFL+K+TN
Sbjct: 1126 EFLSKITN 1133


>sp|Y022_OSHVF|UNCHARACTERIZED protein ORF22|Ostreid herpesvirus 1 (isolate France)

Query: 1 DLEFLAKMTN 10
D LAKMTN
Sbjct: 860 DFTSLAKMTN 869


>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)

Query: 3 EFLAKMTN 10
E++AK+TN
Sbjct: 250 EYMAKITN 257




136|Sequence|676|685|AKMTNGFSGA

>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 AKMTNGFS 8
AK+TNGFS
Sbjct: 1183 AKITNGFS 1190


>sp|Y440_SIRV1|UNCHARACTERIZED protein 440|Sulfolobus islandicus rod-shaped virus 1

Query: 1 AKMTNGFSG 9
AK NGF+G
Sbjct: 89 AKFQNGFTG 97


>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 3 MTNGFS 8
MTNGFS
Sbjct: 3571 MTNGFS 3576


>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)

Query: 3 MTNGFS 8
MTNGFS
Sbjct: 3568 MTNGFS 3573


>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)

Query: 3 MTNGFS 8
MTNGFS
Sbjct: 3514 MTNGFS 3519


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 3 MTNGFS 8
MTNGFS
Sbjct: 3519 MTNGFS 3524


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 3 MTNGFS 8
MTNGFS
Sbjct: 3539 MTNGFS 3544


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 3 MTNGFS 8
MTNGFS
Sbjct: 3571 MTNGFS 3576


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 3 MTNGFS 8
MTNGFS
Sbjct: 3568 MTNGFS 3573


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 3 MTNGFS 8
MTNGFS
Sbjct: 3514 MTNGFS 3519


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 3 MTNGFS 8
MTNGFS
Sbjct: 3519 MTNGFS 3524


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 3 MTNGFS 8
MTNGFS
Sbjct: 3539 MTNGFS 3544


>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 AKMTNGFS 8
AK+TNG S
Sbjct: 1183 AKITNGLS 1190




137|Sequence|681|690|GFSGADLTEI

>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1

Query: 1 GFSGADLTEI 10
GFS AD+ EI
Sbjct: 422 GFSHADMHEI 431


>sp|VRPO_LAMBD|REPLICATION protein O|Escherichia phage lambda (Bacteriophage lambda)

Query: 1 GFSGADLTE 9
+SGADLT+
Sbjct: 39 AYSGADLTK 47


>sp|FUS_RINDR|FUSION glycoprotein F0|Rinderpest virus (strain RBOK) (RDV)

Query: 1 GFSGADLTEI 10
G+SG+DL I
Sbjct: 246 GYSGSDLLAI 255


>sp|FUS_RINDK|FUSION glycoprotein F0|Rinderpest virus (strain Kabete O)

Query: 1 GFSGADLTEI 10
G+SG+DL I
Sbjct: 246 GYSGSDLLAI 255


>sp|FUS_RINDL|FUSION glycoprotein F0|Rinderpest virus (strain L) (RDV)

Query: 1 GFSGADLTEI 10
G+SG+DL I
Sbjct: 246 GYSGSDLLAI 255


>sp|FUS_RINDB|FUSION glycoprotein F0|Rinderpest virus (strain RBT1) (RDV)

Query: 1 GFSGADLTEI 10
G+SG+DL I
Sbjct: 246 GYSGSDLLAI 255




138|Sequence|686|695|DLTEICQRAC

>sp|RPOA_LDVP|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 1 DLTEICQRAC 10
D+ +C+RAC
Sbjct: 2509 DIDALCKRAC 2518


>sp|POL1_TRSV|RNA1 polyprotein|Tobacco ringspot virus (TobRV) (TRSV)

Query: 1 DLTEICQRAC 10
D+ CQRAC
Sbjct: 345 DVVSQCQRAC 354


>sp|RPOA_LDVC|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 1 DLTEICQRAC 10
D+ +C+RAC
Sbjct: 2530 DIDALCERAC 2539


>sp|SODC_PBCV1|SUPEROXIDE dismutase [Cu-Zn]|Paramecium bursaria Chlorella virus 1

Query: 1 DLTEICQRAC 10
DLT+ C AC
Sbjct: 82 DLTDGCTSAC 91


>sp|POL_MLVFF|GAG-POL polyprotein|Friend murine leukemia virus (isolate

Query: 1 DLTEICQRAC 10
D+TE CQ AC
Sbjct: 1419 DITETCQ-AC 1427


>sp|LYS_BPB30|D-ALANYL-L-ALANINE endopeptidase|Streptococcus phage B30 (Streptococcus agalactiae

Query: 1 DLTEICQRA 9
DLT CQ+A
Sbjct: 166 DLTTTCQQA 174


>sp|POL_SIVCZ|GAG-POL polyprotein|Simian immunodeficiency virus (isolate CPZ

Query: 2 LTEICQ 7
LTEICQ
Sbjct: 570 LTEICQ 575


>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 1 DLTEICQRA 9
+LT +C+RA
Sbjct: 111 NLTRLCERA 119


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 1 DLTEICQRA 9
+LT +C+RA
Sbjct: 111 NLTRLCERA 119


>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)

Query: 1 DLTEICQRA 9
+LT +C+RA
Sbjct: 111 NLTRLCERA 119


>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)

Query: 1 DLTEICQRA 9
+LT +C+RA
Sbjct: 111 NLTRLCERA 119


>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)

Query: 1 DLTEICQRA 9
+LT +C+RA
Sbjct: 111 NLTRLCERA 119


>sp|UL78_HCMVM|PROTEIN UL78|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 LTEICQRAC 10
L E CQ++C
Sbjct: 314 LVERCQQSC 322


>sp|UL78_HCMVA|UNCHARACTERIZED protein UL78|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 LTEICQRAC 10
L E CQ++C
Sbjct: 314 LVERCQQSC 322


>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain

Query: 1 DLTEICQRAC 10
DLT++ +++C
Sbjct: 120 DLTQLIEKSC 129




139|Sequence|691|700|CQRACKLAIR

>sp|ICP27_ELHVK|MRNA export factor ICP27 homolog|Elephantid herpesvirus 1 (isolate Asian

Query: 1 CQRACKLAI 9
C+R CK A+
Sbjct: 273 CRRRCKFAL 281


>sp|RPOA_LDVC|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 1 CQRACK 6
C+RACK
Sbjct: 2535 CERACK 2540


>sp|POL1_TRSV|RNA1 polyprotein|Tobacco ringspot virus (TobRV) (TRSV)

Query: 1 CQRACK 6
CQRAC+
Sbjct: 350 CQRACE 355


>sp|DPOL_HPBDB|PROTEIN P|Duck hepatitis B virus (isolate

Query: 5 CKLAIR 10
CKLAIR
Sbjct: 650 CKLAIR 655


>sp|DPOL_DHBVQ|PROTEIN P|Duck hepatitis B virus (isolate

Query: 5 CKLAIR 10
CKLAIR
Sbjct: 650 CKLAIR 655


>sp|R1A_CVPPU|REPLICASE polyprotein 1a|Porcine transmissible gastroenteritis coronavirus

Query: 1 CQRACKLAI 9
C RAC L +
Sbjct: 2257 CYRACNLNV 2265


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 1 CQRACKLAI 9
C RAC L +
Sbjct: 2257 CYRACNLNV 2265




140|Sequence|696|705|KLAIRESIES

***** No hits found ******


141|Sequence|701|710|ESIESEIRRE

***** No hits found ******


142|Sequence|706|715|EIRRERERQT

>sp|ENLYS_BPP1|SAR-ENDOLYSIN phage P1 (Bacteriophage P1)

Query: 1 EIRRERERQ 9
+IRRE+ERQ
Sbjct: 168 KIRREKERQ 176


>sp|030L_IIV3|UNCHARACTERIZED protein 030L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 EIRRERERQT 10
++R+ERE+QT
Sbjct: 135 QMRKEREQQT 144


>sp|PRO_BPDPK|CAPSID maturation protease|Pseudomonas phage phiKZ

Query: 1 EIRRERERQ 9
+++RERERQ
Sbjct: 226 QVQRERERQ 234


>sp|NEC1_GAHVM|NUCLEAR egress protein 1|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 2 IRRERERQT 10
IR+E +RQT
Sbjct: 248 IRKEYDRQT 256




143|Sequence|711|720|RERQTNPSAM

>sp|RDRP_CFMVN|REPLICASE polyprotein P2AB|Cocksfoot mottle virus (isolate Dactylis

Query: 1 RERQTNPSAM 10
R+ QT+P AM
Sbjct: 686 RKHQTHPGAM 695


>sp|UL32_EHV1B|PACKAGING protein UL32 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 2 ERQTNPSAM 10
E QTNPS +
Sbjct: 529 ELQTNPSVL 537


>sp|UL32_EHV1A|PACKAGING protein UL32 homolog|Equine herpesvirus 1 (strain AB1)

Query: 2 ERQTNPSAM 10
E QTNPS +
Sbjct: 529 ELQTNPSVL 537


>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1

Query: 2 ERQTNPSAM 10
ERQT P A+
Sbjct: 110 ERQTGPVAL 118


>sp|GAG_SIVVT|GAG polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 1 RERQTNPSAM 10
RE++ NP AM
Sbjct: 492 REQKRNPPAM 501




144|Sequence|716|725|NPSAMEVEED

>sp|RP147_FOWPN|DNA-DIRECTED RNA polymerase 147 kDa|Fowlpox virus (strain NVSL) (FPV)

Query: 1 NPSAMEVEED 10
NPS ++V ED
Sbjct: 894 NPSRVKVSED 903




145|Sequence|721|730|EVEEDDPVPE

>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)

Query: 2 VEEDDPVPE 10
V DDPVPE
Sbjct: 144 VMTDDPVPE 152


>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)

Query: 2 VEEDDPVPE 10
V DDPVPE
Sbjct: 144 VMTDDPVPE 152


>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain

Query: 2 VEEDDPVPE 10
V DDPVPE
Sbjct: 144 VMTDDPVPE 152


>sp|VF193_IIV3|PUTATIVE apoptosis inhibitor 021L|Invertebrate iridescent virus 3 (IIV-3)

Query: 3 EEDDPVPE 10
EED+P+P+
Sbjct: 107 EEDEPIPD 114


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 4 EDDPVPE 10
E++PVPE
Sbjct: 1674 EEEPVPE 1680


>sp|TOP2_IIV3|DNA topoisomerase 2|Invertebrate iridescent virus 3 (IIV-3)

Query: 3 EEDDPVPE 10
EEDDP+ E
Sbjct: 804 EEDDPILE 811


>sp|YL015_MIMIV|UNCHARACTERIZED protein L15|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 EEDDPVPE 10
EED PVPE
Sbjct: 67 EEDHPVPE 74


>sp|VF050_IIV3|UNCHARACTERIZED protein 094L|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 VEEDDPVPE 10
VE+ DP+PE
Sbjct: 171 VEKPDPIPE 179


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 1 EVEEDDPVPE 10
+++ DP+PE
Sbjct: 300 QLQMSDPIPE 309


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 1 EVEEDDPVPE 10
+++ DP+PE
Sbjct: 300 QLQMSDPIPE 309


>sp|SEGB_BPT4|PUTATIVE endonuclease segB|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 VEEDDPVPE 10
+++ DP+PE
Sbjct: 203 IKKTDPIPE 211


>sp|GE_PSHV1|ENVELOPE glycoprotein E|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 EVEEDDPVP 9
E+E DD P
Sbjct: 398 EIENDDSAP 406


>sp|NCAP_SV41|NUCLEOPROTEIN virus 41 (SV41)

Query: 3 EEDDPVP 9
EED PVP
Sbjct: 21 EEDTPVP 27


>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2

Query: 3 EEDDPVPE 10
E DDP+P+
Sbjct: 656 EADDPLPQ 663




146|Sequence|726|735|DPVPEIRRDH

>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 1 DPVPEIR 7
DP+PE+R
Sbjct: 305 DPIPELR 311


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 1 DPVPEIR 7
DP+PE+R
Sbjct: 305 DPIPELR 311


>sp|VF050_IIV3|UNCHARACTERIZED protein 094L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 DPVPEIRRD 9
DP+PE RD
Sbjct: 175 DPIPEPNRD 183


>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)

Query: 1 DPVPEI 6
DPVPEI
Sbjct: 148 DPVPEI 153


>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)

Query: 1 DPVPEI 6
DPVPEI
Sbjct: 148 DPVPEI 153


>sp|DNMK_BPT4|DEOXYNUCLEOTIDE monophosphate kinase|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 VPEIRRDH 10
VP+ R+DH
Sbjct: 173 VPDTRQDH 180


>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain

Query: 1 DPVPEI 6
DPVPEI
Sbjct: 148 DPVPEI 153


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 3 VPEIRRD 9
VPE RRD
Sbjct: 44 VPEYRRD 50


>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 2 PVPEIRR 8
P+P IRR
Sbjct: 147 PIPNIRR 153


>sp|R1A_WBV24|REPLICASE polyprotein 1a|White bream virus (isolate Blicca

Query: 2 PVPEIRR 8
P+P IRR
Sbjct: 147 PIPNIRR 153


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 PVPEIRR 8
P+P++RR
Sbjct: 64 PIPKVRR 70


>sp|POL_IPMAI|INTRACISTERNAL A-particle Pol-related polyprotein|Mouse intracisternal a-particle

Query: 5 EIRRDH 10
EIRRDH
Sbjct: 170 EIRRDH 175


>sp|POL_IPMA|INTRACISTERNAL A-particle Pol-related polyprotein|Mouse intracisternal a-particle

Query: 5 EIRRDH 10
EIRRDH
Sbjct: 251 EIRRDH 256


>sp|CAPSD_PVSP|CAPSID protein|Potato virus S (strain Peruvian)

Query: 1 DPVPEIRRD 9
+P PE+RR+
Sbjct: 77 EPTPEMRRN 85


>sp|MP_PASVK|MOVEMENT protein|Panicum streak virus (isolate Kenya)

Query: 1 DPVPEIRRD 9
DP P +RRD
Sbjct: 94 DPSPPVRRD 102




147|Sequence|731|740|IRRDHFEEAM

>sp|VNS1_AQRVG|NON-STRUCTURAL protein 1|Aquareovirus G (isolate American grass

Query: 2 RRDHFEEA 9
R HFEEA
Sbjct: 294 RESHFEEA 301




148|Sequence|736|745|FEEAMRFARR

>sp|PORTL_BPMD2|PORTAL protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 FEEAMRFARR 10
+EEAMR A R
Sbjct: 366 WEEAMRLAYR 375


>sp|PORTL_BPML5|PORTAL protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 1 FEEAMRFARR 10
+EEAMR A R
Sbjct: 366 WEEAMRIAYR 375


>sp|TMP_BPT5|TAPE measure protein pb2 precursor|Escherichia phage T5 (Enterobacteria

Query: 1 FEEAMRFA 8
FEEAMR A
Sbjct: 247 FEEAMRQA 254




149|Sequence|741|750|RFARRSVSDN

>sp|POLG_FMDVS|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 RFARRSVSDN 10
RF + +VSDN
Sbjct: 761 RFVKVTVSDN 770


>sp|DAM_BPP1|DNA N-6-adenine-methyltransferase|Escherichia phage P1 (Bacteriophage

Query: 2 FARRSVS 8
FARRSVS
Sbjct: 731 FARRSVS 737


>sp|U1141_GAHVG|UNCHARACTERIZED protein US1141|Gallid herpesvirus 2 (strain GA)

Query: 2 FARRSVSDN 10
F+RR + DN
Sbjct: 211 FSRRGIKDN 219




150|Sequence|746|755|SVSDNDIRKY

>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 SVSDNDIRKY 10
SVS ND+R++
Sbjct: 28 SVSTNDVRRF 37


>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 SVSDNDIRKY 10
SVS ND+R++
Sbjct: 28 SVSTNDVRRF 37


>sp|YL381_MIMIV|UNCHARACTERIZED protein L381|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 VSDNDIRKY 10
+SDN IR Y
Sbjct: 73 ISDNSIRPY 81


>sp|V155_FOWPN|PUTATIVE ankyrin repeat protein FPV115|Fowlpox virus (strain NVSL) (FPV)

Query: 3 SDNDIRKY 10
SDND+++Y
Sbjct: 500 SDNDVKEY 507


>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)

Query: 1 SVSDNDIRKY 10
S ND+RKY
Sbjct: 22 STVANDVRKY 31


>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)

Query: 1 SVSDNDIRKY 10
S ND+RKY
Sbjct: 22 STVANDVRKY 31


>sp|POXIN_VACCW|POXIN virus (strain Western Reserve)

Query: 1 SVSDNDIRKY 10
S ND+RKY
Sbjct: 24 STVANDVRKY 33


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 4 DNDIRKY 10
DND+R Y
Sbjct: 6480 DNDLRDY 6486


>sp|POXIN_VACCC|POXIN virus (strain Copenhagen) (VACV)

Query: 1 SVSDNDIRKY 10
S ND+RKY
Sbjct: 24 STVANDVRKY 33


>sp|POXIN_VACCA|POXIN virus (strain Ankara) (VACV)

Query: 1 SVSDNDIRKY 10
S ND+RKY
Sbjct: 24 STVANDVRKY 33


>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)

Query: 1 SVSDNDIRKY 10
S ND+RKY
Sbjct: 24 STVANDVRKY 33


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 4 DNDIRKY 10
DND+R Y
Sbjct: 6505 DNDLRDY 6511




151|Sequence|751|760|DIRKYEMFAQ

>sp|YL461_MIMIV|UNCHARACTERIZED protein L461|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DIRKYEMFA 9
DI KYE+F
Sbjct: 148 DIAKYEIFT 156




152|Sequence|756|765|EMFAQTLQQS

>sp|CAPSD_BPT5|MAJOR capsid protein|Escherichia phage T5 (Enterobacteria phage

Query: 1 EMFAQTLQQ 9
E+FAQT+++
Sbjct: 82 ELFAQTVEK 90




153|Sequence|761|770|TLQQSRGFGS

>sp|ETF2_MSEPV|EARLY transcription factor 82 kDa|Melanoplus sanguinipes entomopoxvirus

Query: 1 TLQQSRGF 8
TL+Q+RG+
Sbjct: 70 TLEQARGY 77


>sp|HEMA_I86A0|HEMAGGLUTININ A virus (strain A/Taiwan/1/1986

Query: 5 SRGFGS 10
SRGFGS
Sbjct: 275 SRGFGS 280


>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto

Query: 5 SRGFGS 10
SRGFGS
Sbjct: 274 SRGFGS 279


>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006

Query: 5 SRGFGS 10
SRGFGS
Sbjct: 274 SRGFGS 279


>sp|HEMA_I83A1|HEMAGGLUTININ A virus (strain A/Chile/1/1983

Query: 5 SRGFGS 10
SRGFGS
Sbjct: 275 SRGFGS 280


>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New

Query: 5 SRGFGS 10
SRGFGS
Sbjct: 274 SRGFGS 279


>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007

Query: 5 SRGFGS 10
SRGFGS
Sbjct: 274 SRGFGS 279


>sp|HEMA_I89A5|HEMAGGLUTININ A virus (strain A/Xianfeng/3/1989

Query: 5 SRGFGS 10
SRGFGS
Sbjct: 275 SRGFGS 280


>sp|HEMA_I88A0|HEMAGGLUTININ A virus (strain A/Harbin/1/1988

Query: 5 SRGFGS 10
SRGFGS
Sbjct: 275 SRGFGS 280


>sp|HEMA_I80AA|HEMAGGLUTININ A virus (strain A/India/6263/1980

Query: 5 SRGFGS 10
SRGFGS
Sbjct: 275 SRGFGS 280


>sp|HEMA_I96A2|HEMAGGLUTININ A virus (strain A/USA:Memphis/10/1996

Query: 5 SRGFGS 10
SRGFGS
Sbjct: 275 SRGFGS 280


>sp|HEMA_I79A4|HEMAGGLUTININ A virus (strain A/Kiev/59/1979

Query: 5 SRGFGS 10
SRGFGS
Sbjct: 275 SRGFGS 280


>sp|HEMA_I77AA|HEMAGGLUTININ A virus (strain A/Brazil/11/1978

Query: 5 SRGFGS 10
SRGFGS
Sbjct: 275 SRGFGS 280


>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936

Query: 5 SRGFGS 10
SRGFGS
Sbjct: 275 SRGFGS 280


>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935

Query: 5 SRGFGS 10
SRGFGS
Sbjct: 275 SRGFGS 280


>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945

Query: 5 SRGFGS 10
SRGFGS
Sbjct: 275 SRGFGS 280


>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943

Query: 5 SRGFGS 10
SRGFGS
Sbjct: 274 SRGFGS 279


>sp|DUT_EBVB9|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain

Query: 3 QQSRGFGS 10
+Q RGFGS
Sbjct: 268 RQGRGFGS 275


>sp|DUT_EBVA8|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain

Query: 3 QQSRGFGS 10
+Q RGFGS
Sbjct: 268 RQGRGFGS 275


>sp|DUT_EBVG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain GD1)

Query: 3 QQSRGFGS 10
+Q RGFGS
Sbjct: 268 RQGRGFGS 275




154|Sequence|766|775|RGFGSFRFPS

>sp|EXON_IIV6|PUTATIVE exonuclease 012L|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 GFGSFRFP 9
G+GSF FP
Sbjct: 50 GYGSFSFP 57


>sp|TRX1_PSHV1|TRIPLEX capsid protein 1|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 RGFGSFRFPS 10
R GSFRFP+
Sbjct: 290 RPCGSFRFPA 299


>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 GFGSFRFPS 10
GFGS FP+
Sbjct: 6 GFGSISFPN 14


>sp|VP5_FDVS|UNCHARACTERIZED protein VP5|Fiji disease virus (isolate Sugarcane)

Query: 1 RGFGSFRF 8
R FG FRF
Sbjct: 860 RSFGYFRF 867


>sp|FPG_MIMIV|PROBABLE formamidopyrimidine-DNA glycosylase|Acanthamoeba polyphaga

Query: 1 RGFGSFRF 8
R FG+F+F
Sbjct: 114 RNFGTFKF 121


>sp|DPOL_PBCVN|DNA polymerase|Paramecium bursaria Chlorella virus NY2A

Query: 2 GFGSFRFP 9
G G+F++P
Sbjct: 524 GLGTFKYP 531


>sp|VG67_ICHVA|UNCHARACTERIZED protein ORF67|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 RGFGSFRF 8
RG GSFR
Sbjct: 448 RGHGSFRL 455


>sp|CAPSD_FCVF9|CAPSID protein VP1|Feline calicivirus (strain F9) (FCV)

Query: 2 GFGSFRFP 9
GFG FP
Sbjct: 638 GFGKLEFP 645


>sp|R1AB_BYVU|REPLICASE polyprotein 1ab|Beet yellows virus (isolate Ukraine)

Query: 3 FGSFRFP 9
FG+ RFP
Sbjct: 304 FGTLRFP 310




155|Sequence|771|780|FRFPSGNQGG

>sp|YL136_MIMIV|UNCHARACTERIZED protein L136|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 FRFPSGNQG 9
F FPS NQG
Sbjct: 90 FTFPSSNQG 98


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 1 FRFPSGNQGG 10
+R P GN GG
Sbjct: 6702 YRSPQGNPGG 6711


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 FRFPSGNQGG 10
+R P GN GG
Sbjct: 6698 YRSPQGNPGG 6707


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 1 FRFPSGNQGG 10
+R P GN GG
Sbjct: 6646 YRSPQGNPGG 6655


>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 3 FPSGNQG 9
FPSGN G
Sbjct: 238 FPSGNGG 244


>sp|VG56_ICHVA|UNCHARACTERIZED protein ORF56|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 FRFPSGNQ 8
FR P+GN
Sbjct: 200 FRLPAGNH 207


>sp|Y12K_CMVSI|UNCHARACTERIZED 12.4 kDa protein|Cymbidium mosaic virus (strain Singapore)

Query: 2 RFPSGNQ 8
RFPSG Q
Sbjct: 44 RFPSGGQ 50


>sp|UL33_HCMVM|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain Merlin)

Query: 1 FRFPSGNQGG 10
F FPSG G
Sbjct: 376 FNFPSGTWKG 385


>sp|UL33_HCMVA|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain AD169)

Query: 1 FRFPSGNQGG 10
F FPSG G
Sbjct: 376 FNFPSGTWKG 385


>sp|RPOA_EAVBU|REPLICASE polyprotein 1ab|Equine arteritis virus (strain Bucyrus)

Query: 3 FPSGNQGG 10
P+GN GG
Sbjct: 254 LPAGNYGG 261


>sp|VGLG_TRTV|MAJOR surface glycoprotein G|Turkey rhinotracheitis virus (TRTV)

Query: 4 PSGNQGG 10
P+GN GG
Sbjct: 87 PAGNYGG 93




156|Sequence|776|785|GNQGGAGPSQ

>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 1 GNQGGAGPSQ 10
GN+GG PS+
Sbjct: 496 GNRGGPVPSE 505


>sp|YO15_ADEG1|UNCHARACTERIZED protein ORF15|Fowl adenovirus A serotype 1

Query: 1 GNQGGAGPSQ 10
GNQG A P+Q
Sbjct: 64 GNQGSAIPTQ 73


>sp|GGAG_FLV|GLYCO-GAG protein|Feline leukemia virus

Query: 4 GGAGPSQ 10
GGAGPS+
Sbjct: 28 GGAGPSK 34


>sp|CVC2_ALHV1|CAPSID vertex component 2|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 NQGGAGP 8
NQGGA P
Sbjct: 109 NQGGARP 115


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 2 NQGGAGPSQ 10
N+GG PS+
Sbjct: 497 NRGGPAPSE 505


>sp|CPM_GLRV3|MINOR capsid protein|Grapevine leafroll-associated virus 3 (isolate

Query: 4 GGAGPSQ 10
GG GPS+
Sbjct: 253 GGVGPSE 259


>sp|POL1_BPMV|RNA1 polyprotein|Bean-pod mottle virus (strain Kentucky

Query: 3 QGGAGPSQ 10
QG A PSQ
Sbjct: 1696 QGAARPSQ 1703




157|Sequence|781|790|AGPSQGSGGG

>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4

Query: 1 AGPSQGSGGG 10
AGPS GGG
Sbjct: 135 AGPSSQDGGG 144


>sp|Y030_SIFVH|UNCHARACTERIZED protein 30|Sulfolobus islandicus filamentous virus (isolate

Query: 3 PSQGSGGG 10
P+QG GGG
Sbjct: 74 PNQGDGGG 81


>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 GPSQGSGG 9
GP +G GG
Sbjct: 782 GPGEGPGG 789


>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 GPSQGSGG 9
GP +G GG
Sbjct: 782 GPGEGPGG 789


>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 GPSQGSGG 9
GP +G GG
Sbjct: 782 GPGEGPGG 789


>sp|POL1_ARMVN|RNA1 polyprotein|Arabis mosaic virus (isolate NW)

Query: 2 GPSQGSG 8
GP+QG G
Sbjct: 1242 GPAQGQG 1248




158|Sequence|786|795|GSGGGTGGSV

>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)

Query: 2 SGGGTGGSV 10
S GGTGG+V
Sbjct: 492 SFGGTGGNV 500


>sp|VINT_SSV1|INTEGRASE spindle-shape virus 1 (SSV1)

Query: 1 GSGGGTGGS 9
GSGGG G+
Sbjct: 75 GSGGGKEGT 83


>sp|VPX_SIVVG|PROTEIN Vpx|Simian immunodeficiency virus agm.vervet (isolate

Query: 1 GSGGGTGGSV 10
G GGG G V
Sbjct: 105 GQGGGRAGRV 114


>sp|POLB_CHPVU|ORFB polyprotein|Cryphonectria hypovirus 1 (strain Euro7)

Query: 3 GGGTGGS 9
GGGTG S
Sbjct: 2100 GGGTGQS 2106


>sp|POLB_CHPVE|ORFB polyprotein|Cryphonectria hypovirus 1 (strain EP713)

Query: 3 GGGTGGS 9
GGGTG S
Sbjct: 2101 GGGTGQS 2107


>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain

Query: 1 GSGGGTGGS 9
G G G+GG+
Sbjct: 319 GMGSGSGGT 327


>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)

Query: 4 GGTGGSV 10
GGTGG +
Sbjct: 112 GGTGGHI 118


>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)

Query: 4 GGTGGSV 10
GGTGG +
Sbjct: 112 GGTGGHI 118


>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 GSGGGTGG 8
GSG TGG
Sbjct: 240 GSGPNTGG 247


>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 GSGGGTGG 8
GSG TGG
Sbjct: 240 GSGPNTGG 247




159|Sequence|791|800|TGGSVYTEDN

>sp|KITH_SHEVK|THYMIDINE kinase|Sheeppox virus (strain KS-1) (SPPV)

Query: 2 GGSVYTEDN 10
G SVYT DN
Sbjct: 47 GNSVYTHDN 55


>sp|MVP_TVMV|P3N-PIPO polyprotein|Tobacco vein mottling virus (TVMV)

Query: 2 GGSVYTEDN 10
GG VY+E+N
Sbjct: 731 GGLVYSENN 739


>sp|POLG_TVMV|GENOME polyprotein|Tobacco vein mottling virus (TVMV)

Query: 2 GGSVYTEDN 10
GG VY+E+N
Sbjct: 731 GGLVYSENN 739


>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 2 GGSVYTED 9
G ++YTED
Sbjct: 242 GSTIYTED 249


>sp|RFCS3_MIMIV|PUTATIVE replication factor C small|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 GGSVYTED 9
GGS+ TED
Sbjct: 230 GGSINTED 237


>sp|VP41_BPAPS|PUTATIVE protein p41|Acyrthosiphon pisum secondary endosymbiont phage

Query: 3 GSVYTEDN 10
G++Y++DN
Sbjct: 297 GAIYSDDN 304


>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006

Query: 1 TGGSVYTEDN 10
+G ++YT+DN
Sbjct: 95 SGWAIYTKDN 104


>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996

Query: 1 TGGSVYTEDN 10
+G ++YT+DN
Sbjct: 95 SGWAIYTKDN 104


>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007

Query: 1 TGGSVYTEDN 10
+G ++YT+DN
Sbjct: 95 SGWAIYTKDN 104


>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New

Query: 1 TGGSVYTEDN 10
+G ++YT+DN
Sbjct: 95 SGWAIYTKDN 104


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 GSVYTEDN 10
G+V+TE+N
Sbjct: 2899 GAVFTEEN 2906


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 GSVYTEDN 10
G+V+TE+N
Sbjct: 2899 GAVFTEEN 2906


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 GSVYTEDN 10
G+V+TE+N
Sbjct: 2899 GAVFTEEN 2906


>sp|027R_FRG3G|UNCHARACTERIZED protein 027R|Frog virus 3 (isolate Goorha)

Query: 1 TGGSVYTEDN 10
TG TEDN
Sbjct: 262 TGAGTSTEDN 271


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 GSVYTEDN 10
G+V+TE+N
Sbjct: 2899 GAVFTEEN 2906


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 GSVYTEDN 10
G+V+TE+N
Sbjct: 2899 GAVFTEEN 2906


>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996

Query: 2 GGSVYTEDN 10
G ++YT+DN
Sbjct: 96 GWAIYTKDN 104


>sp|RDRP_ACLSA|RNA-DIRECTED RNA polymerase|Apple chlorotic leaf spot virus

Query: 1 TGGSVYTED 9
TGGS Y E+
Sbjct: 467 TGGSDYPEE 475


>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 1 TGGSVYTEDN 10
+G +VY++DN
Sbjct: 95 SGWAVYSKDN 104




160|Sequence|796|806|YTEDNDDDLYG

>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 YTEDNDDDLY 10
YTED DD++Y
Sbjct: 351 YTEDVDDEMY 360


>sp|RDRP_ROTBN|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United

Query: 1 YTEDNDDDLY 10
YTED DD++Y
Sbjct: 351 YTEDVDDEMY 360


>sp|RDRP_ROTRF|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/France/RF/1975/G6P6[1])

Query: 1 YTEDNDDDLY 10
YTED DD++Y
Sbjct: 351 YTEDVDDEMY 360


>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United

Query: 1 YTEDNDDDLY 10
YTED DD++Y
Sbjct: 351 YTEDVDDEMY 360


>sp|RDRP_ROTBU|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United

Query: 1 YTEDNDDDLY 10
YTED DD++Y
Sbjct: 351 YTEDVDDEMY 360


>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 YTEDNDDDLY 10
YTED DD++Y
Sbjct: 351 YTEDVDDEMY 360


>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate

Query: 1 YTEDNDDDLY 10
YTED DD++Y
Sbjct: 351 YTEDVDDEMY 360


>sp|RDRP_ROTTU|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Monkey/United

Query: 1 YTEDNDDDLY 10
YTED DD++Y
Sbjct: 351 YTEDVDDEMY 360


>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 YTEDNDDDLY 10
YTED DD++Y
Sbjct: 351 YTEDVDDEMY 360


>sp|RDRP_ROTW3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United

Query: 1 YTEDNDDDLY 10
YTED DD++Y
Sbjct: 351 YTEDIDDEMY 360


>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)

Query: 3 EDNDDDLYG 11
ED+DD L+G
Sbjct: 1309 EDDDDGLFG 1317


>sp|PRIM_ASFK5|PUTATIVE helicase/primase complex protein|African swine fever virus

Query: 3 EDNDDDLY 10
EDNDD++Y
Sbjct: 90 EDNDDNVY 97


>sp|RLIG_BPTS2|RNA ligase 1|Bacteriophage TS2126

Query: 1 YTEDNDDDLYG 11
Y ED DDL G
Sbjct: 279 YAEDRLDDLVG 289


>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 YTEDNDDDLY 10
YTED D+++Y
Sbjct: 351 YTEDVDEEMY 360


>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 YTEDNDDDLY 10
YT+D DD++Y
Sbjct: 351 YTKDVDDEMY 360


>sp|RDRP_ROTSP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/SA11-Patton/G3P[X]) (RV-A)

Query: 1 YTEDNDDDLY 10
YTE+ DD++Y
Sbjct: 351 YTENVDDEMY 360


>sp|RDRP_ROTPG|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Pig/United

Query: 1 YTEDNDDDLY 10
YTED D+++Y
Sbjct: 351 YTEDVDNEMY 360


>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 1 YTEDNDDDLY 10
YTE+ DD++Y
Sbjct: 351 YTENVDDEMY 360


>sp|RDRP_ROTS1|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/SA11-Both/G3P5B[2]) (RV-A)

Query: 1 YTEDNDDDLY 10
YTE+ DD++Y
Sbjct: 351 YTENVDDEMY 360


>sp|RDRP_ROTSH|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Monkey/South

Query: 1 YTEDNDDDLY 10
YTE+ DD++Y
Sbjct: 351 YTENVDDEMY 360


>sp|RDRP_ROTPY|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Pig/Mexico/YM/1983/G11P9[7])

Query: 1 YTEDNDDDLY 10
YTED D+++Y
Sbjct: 351 YTEDVDNEMY 360


>sp|STXB_BPH30|SHIGA-LIKE toxin 1 subunit B|Bacteriophage H30

Query: 1 YTEDNDDDLY 10
YT+ NDDD +
Sbjct: 31 YTKYNDDDTF 40


>sp|STXB_BPH19|SHIGA-LIKE toxin 1 subunit B|Enterobacteria phage H19B (Bacteriophage H19B)

Query: 1 YTEDNDDDLY 10
YT+ NDDD +
Sbjct: 31 YTKYNDDDTF 40


>sp|STXB_BP788|SHIGA toxin subunit B|Shigella phage 7888 (Shigella sonnei

Query: 1 YTEDNDDDLY 10
YT+ NDDD +
Sbjct: 31 YTKYNDDDTF 40


>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 1 YTEDNDDDLY 10
YTED D ++Y
Sbjct: 351 YTEDVDSEMY 360


>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 1 YTEDNDDDLY 10
YTED D ++Y
Sbjct: 351 YTEDVDGEMY 360


>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United

Query: 1 YTEDNDDDLY 10
YTED D ++Y
Sbjct: 351 YTEDVDGEMY 360


>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 1 YTEDNDDDLY 10
YTED D ++Y
Sbjct: 351 YTEDVDGEMY 360


>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 1 YTEDNDDDLY 10
YTED D ++Y
Sbjct: 351 YTEDVDGEMY 360


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 4 DNDDDLYG 11
D DDD++G
Sbjct: 2096 DVDDDMFG 2103


>sp|GE_CHV1E|ENVELOPE glycoprotein E|Cercopithecine herpesvirus 1 (strain E2490)

Query: 1 YTEDNDDDLYG 11
Y DD+LYG
Sbjct: 452 YIRLADDELYG 462


>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 YTEDNDDDLY 10
YT+D D+++Y
Sbjct: 351 YTDDVDNEMY 360


>sp|YR447_MIMIV|UNCHARACTERIZED protein R447|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 NDDDLY 10
NDDDLY
Sbjct: 4 NDDDLY 9


>sp|E1BS_ADECT|E1B protein, small T-antigen|Canine adenovirus serotype 2 (strain

Query: 4 DNDDDLYG 11
D+DD L+G
Sbjct: 162 DSDDPLFG 169


>sp|E1BS_ADEC2|E1B protein, small T-antigen|Canine adenovirus serotype 2 (CAdV-2)

Query: 4 DNDDDLYG 11
D+DD L+G
Sbjct: 163 DSDDPLFG 170


>sp|YL032_MIMIV|PUTATIVE KilA-N domain-containing protein L32|Acanthamoeba polyphaga

Query: 1 YTEDNDDDLYG 11
Y ED+DD+ G
Sbjct: 15 YVEDSDDETRG 25


>sp|Y006_OSHVF|UNCHARACTERIZED protein ORF6|Ostreid herpesvirus 1 (isolate France)

Query: 1 YTEDNDDDLYG 11
+ E DDD+YG
Sbjct: 262 HGETLDDDMYG 272


>sp|L_CDVO|RNA-DIRECTED RNA polymerase L|Canine distemper virus (strain Onderstepoort)

Query: 3 EDNDDDLY 10
EDND ++Y
Sbjct: 646 EDNDIEIY 653


>sp|YR150_MIMIV|UNCHARACTERIZED protein R150|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 YTEDNDDDLY 10
YT DND Y
Sbjct: 31 YTSDNDQSTY 40






THE END