TERA_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|DGKSDAGSAM

>sp|TIAS_PYRNV|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrobaculum neutrophilum

Query: 1 DGKSDAGSAM 10
+GK+D G AM
Sbjct: 90 EGKTDPGVAM 99


>sp|HIS6_METBU|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcoides burtonii

Query: 1 DGKSDAGSA 9
DGK+DAG A
Sbjct: 238 DGKADAGLA 246




2|SequenceR|15|6|ATSLDDGKSD

>sp|RL30E_METKA|LARGE ribosomal subunit protein eL30|Methanopyrus kandleri (strain AV19

Query: 4 LDDGKSD 10
LDDG+SD
Sbjct: 87 LDDGESD 93




3|SequenceR|20|11|KQKLIATSLD

***** No hits found ******


4|SequenceR|25|16|RNPRNKQKLI

>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PRNKQKLI 10
PRNKQ LI
Sbjct: 717 PRNKQNLI 724


>sp|CBIA_METM5|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C5 /

Query: 3 PRNKQKLI 10
P NKQKL+
Sbjct: 196 PENKQKLL 203


>sp|RFRNP_METMA|RNA-FREE ribonuclease P|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NPRNKQK 8
NP+NK+K
Sbjct: 132 NPQNKKK 138


>sp|LONB_ARCFU|ARCHAEAL Lon protease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PRNKQKLI 10
P N+QKL+
Sbjct: 315 PENRQKLV 322


>sp|RFRNP_METAC|RNA-FREE ribonuclease P|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 NPRNKQK 8
NP+NK+K
Sbjct: 132 NPQNKKK 138


>sp|EF2_ARCFU|ELONGATION factor 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RNPRNKQKLI 10
+NPR+ KLI
Sbjct: 397 KNPRDLPKLI 406


>sp|CSM3_METTH|CRISPR system Cms endoribonuclease Csm3|Methanothermobacter

Query: 2 NPRNKQKL 9
NPRN++++
Sbjct: 152 NPRNQERV 159


>sp|EF2_IGNH4|ELONGATION factor 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 RNPRNKQKLI 10
+NPR+ KLI
Sbjct: 406 KNPRDLPKLI 415


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 1 RNPRNKQKLI 10
+NPR+ KLI
Sbjct: 403 KNPRDLPKLI 412


>sp|MPTA_THEVO|GTP cyclohydrolase MptA|Thermoplasma volcanium (strain ATCC 51530

Query: 2 NPRNKQKLI 10
N RN+ KLI
Sbjct: 173 NQRNRTKLI 181




5|SequenceR|30|21|EDVILRNPRN

>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 1 EDVILRNPR 9
EDVIL+N +
Sbjct: 204 EDVILKNEK 212


>sp|GUAA_PYRAE|GMP synthase [glutamine-hydrolyzing]|Pyrobaculum aerophilum (strain

Query: 1 EDVILRNP 8
EDV+ R+P
Sbjct: 375 EDVVYRHP 382


>sp|RS7_PYRAE|SMALL ribosomal subunit protein uS7|Pyrobaculum aerophilum (strain ATCC

Query: 1 EDVILRNP 8
EDV++R+P
Sbjct: 48 EDVVVRDP 55


>sp|CDC6_METMJ|ORC1-TYPE DNA replication protein|Methanoculleus marisnigri (strain ATCC

Query: 1 EDVILRNPR 9
E+V+ R+PR
Sbjct: 400 EEVVTRDPR 408


>sp|AAT_SULAC|ASPARTATE aminotransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 VILRNPRN 10
V+L NP N
Sbjct: 173 VVLNNPHN 180


>sp|SAT_NITMS|SULFATE adenylyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 DVILRNP 8
DV+L+NP
Sbjct: 95 DVLLQNP 101




6|SequenceR|35|26|DENIAEDVIL

>sp|RLME_NITMS|RIBOSOMAL RNA large subunit methyltransferase|Nitrosopumilus maritimus

Query: 1 DENIAEDVI 9
DEN+ +DV+
Sbjct: 91 DENVVDDVM 99


>sp|KAE1B_PICTO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 DENIAEDVIL 10
DE+IA+D+ L
Sbjct: 473 DEDIADDLFL 482


>sp|CCA_METMP|CCA-ADDING enzyme|Methanococcus maripaludis (strain DSM 14266

Query: 2 ENIAEDVI 9
ENI EDVI
Sbjct: 309 ENIVEDVI 316


>sp|CCA_METM5|CCA-ADDING enzyme|Methanococcus maripaludis (strain C5 /

Query: 2 ENIAEDVI 9
ENI EDVI
Sbjct: 309 ENIVEDVI 316


>sp|CCA_METM7|CCA-ADDING enzyme|Methanococcus maripaludis (strain C7 /

Query: 2 ENIAEDVI 9
ENI EDVI
Sbjct: 309 ENIVEDVI 316


>sp|Y1477_THEKO|MEMO1 family protein TK1477|Thermococcus kodakarensis (strain ATCC

Query: 1 DENIAEDV 8
DE++AED+
Sbjct: 159 DEDVAEDL 166


>sp|CIMA_METKA|PUTATIVE (R)-citramalate synthase CimA|Methanopyrus kandleri (strain AV19 /

Query: 2 ENIAEDVIL 10
E + EDVIL
Sbjct: 194 ERVGEDVIL 202


>sp|RS3_METB6|SMALL ribosomal subunit protein uS3|Methanoregula boonei (strain DSM

Query: 1 DENIAEDV 8
DENI E+V
Sbjct: 224 DENIDEEV 231


>sp|CCA_HALLT|CCA-ADDING enzyme|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 DENIAEDVIL 10
DE +A+DV+L
Sbjct: 149 DEGLADDVVL 158


>sp|IDH_HALVD|ISOCITRATE dehydrogenase [NADP]|Haloferax volcanii (strain ATCC 29605

Query: 1 DENIAEDVI 9
DEN+ ED +
Sbjct: 79 DENLPEDTV 87


>sp|RPO1C_META3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus aeolicus (strain ATCC

Query: 1 DENIAEDVI 9
DENI D+I
Sbjct: 34 DENIIRDII 42


>sp|PGK_ARCFU|PHOSPHOGLYCERATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DENIAEDVIL 10
+ NIAE V+L
Sbjct: 215 ENNIAEKVVL 224




7|SequenceR|40|31|SVVSNDENIA

>sp|KHSE_PYRFU|HOMOSERINE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VVSNDENIA 10
V NDEN+A
Sbjct: 47 VPENDENVA 55


>sp|Y889_METJA|UNCHARACTERIZED protein MJ0889|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SVVSNDENI 9
S++SN ENI
Sbjct: 202 SIISNRENI 210


>sp|GLNB2_METBA|NITROGEN fixation nifHD1 region GlnB-like|Methanosarcina barkeri

Query: 1 SVVSNDENI 9
S+V NDE++
Sbjct: 72 SIVVNDEDV 80


>sp|RFRNP_METMP|RNA-FREE ribonuclease P|Methanococcus maripaludis (strain DSM 14266

Query: 1 SVVSNDENI 9
+VV+NDE I
Sbjct: 184 AVVANDEGI 192




8|SequenceR|45|36|KPQSLSVVSN

>sp|GATB_AERPE|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Aeropyrum pernix (strain ATCC 700893

Query: 2 PQSLSVVSN 10
PQS++++SN
Sbjct: 376 PQSIAILSN 384


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 KPQSLSVVSN 10
+P+SLSV N
Sbjct: 425 RPESLSVTIN 434




9|SequenceR|50|41|QLEDMKPQSL

>sp|TRIN_SULTO|PUTATIVE Tricorn-like protease N-terminal subunit|Sulfurisphaera tokodaii

Query: 2 LEDMKP 7
LEDMKP
Sbjct: 46 LEDMKP 51


>sp|RL1_SULAC|LARGE ribosomal subunit protein uL1|Sulfolobus acidocaldarius (strain

Query: 3 EDMKPQSL 10
EDMKP+ L
Sbjct: 175 EDMKPEDL 182


>sp|RL1_SULTO|LARGE ribosomal subunit protein uL1|Sulfurisphaera tokodaii (strain DSM

Query: 3 EDMKPQSL 10
EDMKP+ L
Sbjct: 172 EDMKPEDL 179


>sp|GATD_THEKO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermococcus kodakarensis (strain ATCC

Query: 3 EDMKPQ 8
EDMKP+
Sbjct: 149 EDMKPE 154


>sp|Y1661_ARCFU|UNCHARACTERIZED protein AF_1661|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QLEDMKP 7
QL+D+KP
Sbjct: 77 QLDDVKP 83


>sp|TRPB_PYRHO|TRYPTOPHAN synthase beta chain|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QLEDMKPQSL 10
+LED +PQ L
Sbjct: 438 KLEDYEPQIL 447


>sp|DPHB_THEGJ|DIPHTHINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 QLEDMKPQSL 10
Q+EDMK + +
Sbjct: 187 QVEDMKKEGI 196


>sp|ATGT_METST|TRNA-GUANINE(15) transglycosylase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 QLEDMKPQS 9
QLE++KP++
Sbjct: 383 QLENIKPKN 391




10|SequenceR|55|46|DGRFLQLEDM

>sp|SYP_NANEQ|PROLINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 DGRFLQL 7
DGRFLQ+
Sbjct: 216 DGRFLQV 222


>sp|HUTH_THEAC|PROBABLE histidine ammonia-lyase|Thermoplasma acidophilum (strain ATCC

Query: 1 DGRFLQLEDM 10
DGR L++ED+
Sbjct: 5 DGRSLRVEDV 14


>sp|Y1979_METAC|UPF0758 protein MA_1979|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DGRFLQLED 9
DGR++ L+D
Sbjct: 216 DGRYVSLKD 224


>sp|Y2791_METMA|UPF0758 protein MM_2791|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DGRFLQLED 9
DGR++ L+D
Sbjct: 216 DGRYVSLKD 224


>sp|LADH_METJA|LACTALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DGRFLQLEDM 10
DG+++ EDM
Sbjct: 4 DGKWINREDM 13


>sp|RFCS_METTH|REPLICATION factor C small subunit|Methanothermobacter thermautotrophicus

Query: 1 DGRFLQLEDM 10
DG+F++ DM
Sbjct: 240 DGKFMEARDM 249


>sp|PYRG_METST|CTP synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GRFLQLED 9
G++++LED
Sbjct: 299 GKYIELED 306


>sp|Y541_ARCFU|UNCHARACTERIZED protein AF_0541|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GRFLQLED 9
G+F+ LED
Sbjct: 113 GKFVSLED 120


>sp|RNZ_THEON|RIBONUCLEASE Z|Thermococcus onnurineus (strain NA1)

Query: 1 DGRFLQLEDM 10
+GR ++LED+
Sbjct: 183 NGRIIRLEDV 192


>sp|SYR_SULAC|ARGININE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GRFLQLEDM 10
GRF+ L+D+
Sbjct: 433 GRFISLDDV 441


>sp|RNZ_THEKO|RIBONUCLEASE Z|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DGRFLQLEDM 10
+GR ++LED+
Sbjct: 183 NGRIIRLEDV 192


>sp|AOCD_METKA|ORNITHINE cyclodeaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 DGRFLQLEDM 10
DG ++++ED+
Sbjct: 111 DGEWIEVEDI 120




11|SequenceR|60|51|KLLVTDGRFL

>sp|ILVD_SACS2|DIHYDROXY-ACID dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LVTDGRF 9
LVTDGRF
Sbjct: 465 LVTDGRF 471


>sp|ILVD_SACI7|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 LVTDGRF 9
LVTDGRF
Sbjct: 465 LVTDGRF 471


>sp|ILVD_SACI6|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 LVTDGRF 9
LVTDGRF
Sbjct: 465 LVTDGRF 471


>sp|ILVD_SACI4|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 LVTDGRF 9
LVTDGRF
Sbjct: 465 LVTDGRF 471


>sp|ILVD_SACI3|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 LVTDGRF 9
LVTDGRF
Sbjct: 465 LVTDGRF 471


>sp|ILVD_SACI2|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 LVTDGRF 9
LVTDGRF
Sbjct: 465 LVTDGRF 471


>sp|ILVD_SACI1|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 LVTDGRF 9
LVTDGRF
Sbjct: 465 LVTDGRF 471


>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 LVTDGRF 9
LVTDGRF
Sbjct: 467 LVTDGRF 473


>sp|ILVD_PYRIL|DIHYDROXY-ACID dehydratase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 LVTDGRF 9
LVTDGRF
Sbjct: 467 LVTDGRF 473


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 LVTDGRF 9
LVTDGRF
Sbjct: 467 LVTDGRF 473


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 LVTDGRF 9
LVTDGRF
Sbjct: 467 LVTDGRF 473


>sp|ILVD_METMJ|DIHYDROXY-ACID dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 LVTDGRF 9
LVTDGRF
Sbjct: 457 LVTDGRF 463


>sp|ILVD_METMA|DIHYDROXY-ACID dehydratase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LVTDGRF 9
LVTDGRF
Sbjct: 463 LVTDGRF 469


>sp|ILVD_METKA|DIHYDROXY-ACID dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 3 LVTDGRF 9
LVTDGRF
Sbjct: 459 LVTDGRF 465


>sp|ILVD_METBF|DIHYDROXY-ACID dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 3 LVTDGRF 9
LVTDGRF
Sbjct: 463 LVTDGRF 469


>sp|ILVD2_METAC|DIHYDROXY-ACID dehydratase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LVTDGRF 9
LVTDGRF
Sbjct: 463 LVTDGRF 469


>sp|ILVD_METB6|DIHYDROXY-ACID dehydratase|Methanoregula boonei (strain DSM 21154

Query: 2 LLVTDGRF 9
+L+TDGRF
Sbjct: 459 VLITDGRF 466


>sp|ILVD_METS5|DIHYDROXY-ACID dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 3 LVTDGRF 9
LVTDGRF
Sbjct: 466 LVTDGRF 472


>sp|ILVD_IGNH4|DIHYDROXY-ACID dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 LVTDGRF 9
LVTDGRF
Sbjct: 460 LVTDGRF 466


>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LVTDGRF 9
LVTDGRF
Sbjct: 460 LVTDGRF 466


>sp|ILVD_SULTO|DIHYDROXY-ACID dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 LVTDGRF 9
L+TDGRF
Sbjct: 468 LITDGRF 474


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 LVTDGRF 9
L+TDGRF
Sbjct: 467 LITDGRF 473


>sp|ILVD_PICTO|DIHYDROXY-ACID dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 3 LVTDGRF 9
L+TDGRF
Sbjct: 461 LITDGRF 467


>sp|ILVD_METVS|DIHYDROXY-ACID dehydratase|Methanococcus vannielii (strain ATCC 35089

Query: 3 LVTDGRF 9
L+TDGRF
Sbjct: 459 LITDGRF 465


>sp|ILVD_METTP|DIHYDROXY-ACID dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 LVTDGRF 9
L+TDGRF
Sbjct: 457 LITDGRF 463


>sp|ILVD_METTH|DIHYDROXY-ACID dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 LVTDGRF 9
L+TDGRF
Sbjct: 459 LITDGRF 465


>sp|ILVD_METST|DIHYDROXY-ACID dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 LVTDGRF 9
L+TDGRF
Sbjct: 459 LITDGRF 465


>sp|ILVD_METS3|DIHYDROXY-ACID dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 LVTDGRF 9
L+TDGRF
Sbjct: 459 LITDGRF 465


>sp|ILVD_METMP|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain DSM 14266

Query: 3 LVTDGRF 9
L+TDGRF
Sbjct: 459 LITDGRF 465


>sp|ILVD_METM7|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C7 /

Query: 3 LVTDGRF 9
L+TDGRF
Sbjct: 459 LITDGRF 465


>sp|ILVD_METM6|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C6 /

Query: 3 LVTDGRF 9
L+TDGRF
Sbjct: 459 LITDGRF 465


>sp|ILVD_METM5|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C5 /

Query: 3 LVTDGRF 9
L+TDGRF
Sbjct: 459 LITDGRF 465


>sp|ILVD_METJA|DIHYDROXY-ACID dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LVTDGRF 9
L+TDGRF
Sbjct: 460 LITDGRF 466


>sp|ILVD_METHJ|DIHYDROXY-ACID dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 LVTDGRF 9
L+TDGRF
Sbjct: 457 LITDGRF 463


>sp|ILVD_METBU|DIHYDROXY-ACID dehydratase|Methanococcoides burtonii (strain DSM 6242

Query: 3 LVTDGRF 9
L+TDGRF
Sbjct: 463 LITDGRF 469


>sp|ILVD_META3|DIHYDROXY-ACID dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 LVTDGRF 9
L+TDGRF
Sbjct: 459 LITDGRF 465


>sp|ILVD_ARCFU|DIHYDROXY-ACID dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LVTDGRF 9
L+TDGRF
Sbjct: 457 LITDGRF 463


>sp|ILVD1_METAC|DIHYDROXY-ACID dehydratase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LVTDGRF 9
L+TDGRF
Sbjct: 463 LITDGRF 469


>sp|ILVD_PYRAB|DIHYDROXY-ACID dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 3 LVTDGRF 9
LVTDGRF
Sbjct: 460 LVTDGRF 466


>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 3 LVTDGRF 9
L+TDGRF
Sbjct: 463 LITDGRF 469


>sp|ILVD_SULAC|DIHYDROXY-ACID dehydratase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 LVTDGRF 9
+VTDGRF
Sbjct: 466 MVTDGRF 472


>sp|ILVD_NATPD|DIHYDROXY-ACID dehydratase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 LVTDGRF 9
L+TDGRF
Sbjct: 494 LLTDGRF 500


>sp|GVPL_HALMT|GAS vesicle protein L|Haloferax mediterranei (strain ATCC 33500

Query: 4 VTDGRFL 10
VTDGR+L
Sbjct: 35 VTDGRYL 41


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 1 KLLVTDGRFL 10
K+ + DGRF+
Sbjct: 41 KICLADGRFV 50


>sp|FLAB2_METJA|FLAGELLIN B2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KLLVTDG 7
K+L+TDG
Sbjct: 98 KILITDG 104


>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 1 KLLVTDGR 8
K+L+ DGR
Sbjct: 599 KILIRDGR 606


>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain Fusaro

Query: 1 KLLVTDGR 8
K+L+ DGR
Sbjct: 599 KILIRDGR 606


>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 1 KLLVTDGR 8
K+L+ DGR
Sbjct: 599 KILIRDGR 606


>sp|GCSPA_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 1 KLLVTDGRFL 10
K L+T G FL
Sbjct: 95 KALITRGEFL 104




12|SequenceR|65|56|RRKKGKLLVT

>sp|IMDH_METJA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RRKKGKLLV 9
R KKG+LLV
Sbjct: 213 RDKKGRLLV 221


>sp|PUS10_AERPE|TRNA pseudouridine synthase Pus10|Aeropyrum pernix (strain ATCC 700893

Query: 1 RRKKGKLLVT 10
RR+ GKLLV+
Sbjct: 159 RREVGKLLVS 168




13|SequenceR|70|61|ICVAERRKKG

>sp|DPHB_METAR|DIPHTHINE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 3 VAERRKKG 10
V ERRK+G
Sbjct: 187 VEERRKEG 194


>sp|DHYS_METJA|PROBABLE deoxyhypusine synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 VAERRKKG 10
+ E+RKKG
Sbjct: 52 IEEKRKKG 59


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 3 VAERRKKG 10
+ ERR+KG
Sbjct: 540 IRERRRKG 547


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 3 VAERRKKG 10
+ ERR+KG
Sbjct: 540 IRERRRKG 547


>sp|VHUB_METJA|POLYFERREDOXIN protein VhuB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VAERRKKG 10
VAE+ KKG
Sbjct: 380 VAEKEKKG 387




14|SequenceR|75|66|DDSLVICVAE

>sp|GGR1_METST|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DDSLVIC 7
DD+L+IC
Sbjct: 269 DDNLLIC 275




15|SequenceR|80|71|EDSCTDDSLV

>sp|COBQ_METBU|PROBABLE cobyric acid synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EDSCTDDS 8
+D C DDS
Sbjct: 417 DDGCADDS 424


>sp|NIFH_METMP|NITROGENASE iron protein|Methanococcus maripaludis (strain DSM 14266

Query: 1 EDSCTDDSLV 10
ED CT D ++
Sbjct: 67 EDECTPDKVI 76


>sp|NIFH_METMI|NITROGENASE iron protein|Methanococcus maripaludis (Methanococcus deltae)

Query: 1 EDSCTDDSLV 10
ED CT D ++
Sbjct: 67 EDECTPDKVI 76


>sp|ADEC_METBF|ADENINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 4 CTDDS 8
CTDDS
Sbjct: 242 CTDDS 246


>sp|ADEC_METAC|ADENINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 CTDDS 8
CTDDS
Sbjct: 242 CTDDS 246


>sp|ADEC_METMA|ADENINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 CTDDS 8
CTDDS
Sbjct: 242 CTDDS 246




16|SequenceR|85|76|NMRIKEDSCT

>sp|PYRB_METMA|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina mazei (strain

Query: 1 NMRIKEDSC 9
N+R+KE C
Sbjct: 206 NIRVKESEC 214


>sp|MTBB2_METAC|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina acetivorans (strain ATCC

Query: 1 NMRIKE 6
NMRIKE
Sbjct: 393 NMRIKE 398


>sp|HELS_THEVO|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NMRIKE 6
NMRIKE
Sbjct: 600 NMRIKE 605


>sp|Y1147_METJA|UNCHARACTERIZED protein MJ1147|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MRIKEDS 8
+RIKEDS
Sbjct: 281 LRIKEDS 287




17|SequenceR|90|81|NRVVRNMRIK

>sp|BSUHB_METTH|FRUCTOSE-1,6-BISPHOSPHATASE/INOSITOL-1-MONOPHOSPHATASE thermautotrophicus (strain ATCC 29096

Query: 2 RVVRNMRI 9
RV+R MRI
Sbjct: 189 RVIRRMRI 196


>sp|ACTH_THEAC|ARCHAEAL actin homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NRVVRNMRI 9
NR++ N+R+
Sbjct: 260 NRIIENIRL 268


>sp|ACTH_THEVO|ARCHAEAL actin homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NRVVRNMRI 9
NR++ N+R+
Sbjct: 260 NRIIENIRL 268


>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 1 NRVVRNMRIK 10
+R+++++RIK
Sbjct: 511 DRIIKHVRIK 520




18|SequenceR|95|86|RVRLNNRVVR

***** No hits found ******


19|SequenceR|100|91|IVDGLRVRLN

>sp|NNR_METHJ|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanospirillum hungatei JF-1

Query: 1 IVDGLRVRLN 10
I DG RVR N
Sbjct: 394 ICDGSRVRFN 403


>sp|NNR_HYPBU|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Hyperthermus butylicus (strain

Query: 1 IVDGLRVRLN 10
+ DG R+RLN
Sbjct: 427 VTDGERIRLN 436


>sp|NNR_ARCFU|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Archaeoglobus fulgidus (strain

Query: 1 IVDGLRVRLN 10
I DG RV++N
Sbjct: 381 ITDGSRVKVN 390


>sp|Y094_METJA|UNCHARACTERIZED protein MJ0094|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VDGLRVRLN 10
+DGLRV+L+
Sbjct: 250 LDGLRVKLD 258


>sp|NNR_PYRAE|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Pyrobaculum aerophilum (strain

Query: 1 IVDGLRVRLN 10
I DG+RV++N
Sbjct: 414 ISDGVRVKVN 423


>sp|Y4416_NATPD|DNA-BINDING protein NP_4416A|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IVDGLRVRLN 10
+ DG R RLN
Sbjct: 52 LTDGARKRLN 61


>sp|FLPA_METTP|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanothrix thermoacetophila

Query: 1 IVDGLRV 7
IVDGLRV
Sbjct: 31 IVDGLRV 37


>sp|SYC_ARCFU|CYSTEINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IVDGLRVRL 9
IVDG RV++
Sbjct: 17 IVDGKRVKM 25


>sp|Y1105_HALWD|DNA-BINDING protein HQ_1105A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IVDGLRVRLN 10
+ DG R RLN
Sbjct: 57 LTDGARQRLN 66


>sp|GLMM_METMA|PROBABLE phosphoglucosamine mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VDGLRVRL 9
+DG+RV L
Sbjct: 385 IDGIRVEL 392


>sp|GLMM_METAC|PROBABLE phosphoglucosamine mutase|Methanosarcina acetivorans (strain ATCC

Query: 2 VDGLRVRL 9
+DG+RV L
Sbjct: 385 IDGIRVEL 392


>sp|RRP41_ARCFU|EXOSOME complex component Rrp41|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IVDGLRV 7
IVDGLR+
Sbjct: 12 IVDGLRL 18


>sp|THIC_METKA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 IVDGLRVRLN 10
I +GLRV++N
Sbjct: 55 IGEGLRVKIN 64


>sp|PMDHS_PYRHO|PHOSPHOMEVALONATE dehydratase small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GLRVRLN 10
G+RVR+N
Sbjct: 114 GMRVRIN 120


>sp|Y3180_HALMA|DNA-BINDING protein rrnAC3180|Haloarcula marismortui (strain ATCC 43049

Query: 1 IVDGLRVRLN 10
+ DG R RLN
Sbjct: 51 LTDGARKRLN 60


>sp|PYLB_METBF|3-METHYLORNITHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 VDGLRVRLN 10
+DG+ +RLN
Sbjct: 283 IDGMVLRLN 291


>sp|KPYK_PYRAE|PYRUVATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IVDGLRVRL 9
+VDG+R+ L
Sbjct: 41 LVDGVRINL 49




20|SequenceR|105|96|CPQISIVDGL

>sp|Y1363_THEAC|PUTATIVE HTH-type transcriptional regulatory protein|Thermoplasma

Query: 1 CPQISIVD 8
CP I+IVD
Sbjct: 286 CPVINIVD 293


>sp|DPCKG_METHJ|GTP-DEPENDENT dephospho-CoA kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PQISIVDG 9
P+++IVDG
Sbjct: 53 PEVAIVDG 60


>sp|ENO1_METHJ|ENOLASE 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PQISIVDGL 10
P ISI DGL
Sbjct: 279 PIISIEDGL 287


>sp|ENO2_METHJ|ENOLASE 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PQISIVDGL 10
P ISI DGL
Sbjct: 280 PIISIEDGL 288


>sp|DPCKG_METMJ|GTP-DEPENDENT dephospho-CoA kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PQISIVDG 9
P I+I+DG
Sbjct: 53 PDIAIIDG 60




21|SequenceR|110|101|YKVDPCPQIS

>sp|Y4021_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 YKVDPCPQIS 10
+KVDP QIS
Sbjct: 26 FKVDPGEQIS 35


>sp|Y207_METJA|UNCHARACTERIZED protein MJ0207|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KVDPCPQI 9
K DPCP I
Sbjct: 10 KNDPCPSI 17


>sp|ACDG_METTH|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanothermobacter

Query: 3 VDPCPQIS 10
+D CPQ+S
Sbjct: 39 LDDCPQLS 46


>sp|PUR5_METMP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YKVDPCPQI 9
YK+D P+I
Sbjct: 257 YKIDELPEI 265


>sp|PUR5_METM7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C7 /

Query: 1 YKVDPCPQI 9
YK+D P+I
Sbjct: 257 YKIDELPEI 265


>sp|PUR5_METM6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C6 /

Query: 1 YKVDPCPQI 9
YK+D P+I
Sbjct: 257 YKIDELPEI 265


>sp|PUR5_METM5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C5 /

Query: 1 YKVDPCPQI 9
YK+D P+I
Sbjct: 257 YKIDELPEI 265


>sp|TRKA_ARCFU|TRK system potassium uptake protein|Archaeoglobus fulgidus (strain ATCC

Query: 1 YKVDPCPQIS 10
Y V CPQ+S
Sbjct: 114 YDVLICPQLS 123


>sp|PUR5_METVS|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 YKVDPCPQI 9
YK+D P+I
Sbjct: 257 YKIDNLPEI 265


>sp|Y583_METJA|UNCHARACTERIZED protein MJ0583|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YKVDPCPQIS 10
YKVD CP ++
Sbjct: 17 YKVDVCPCMA 26


>sp|FAU1_SULTO|PROBABLE ribonuclease FAU-1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YKVDPC 6
Y+V+PC
Sbjct: 98 YQVEPC 103


>sp|FAU1_SACS2|PROBABLE ribonuclease FAU-1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YKVDPC 6
+KV+PC
Sbjct: 103 FKVEPC 108


>sp|FAU1_SACI7|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 YKVDPC 6
+KV+PC
Sbjct: 103 FKVEPC 108


>sp|FAU1_SACI6|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.4 /

Query: 1 YKVDPC 6
+KV+PC
Sbjct: 103 FKVEPC 108


>sp|FAU1_SACI4|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.14.25 /

Query: 1 YKVDPC 6
+KV+PC
Sbjct: 103 FKVEPC 108


>sp|FAU1_SACI3|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.27)

Query: 1 YKVDPC 6
+KV+PC
Sbjct: 103 FKVEPC 108


>sp|FAU1_SACI2|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 YKVDPC 6
+KV+PC
Sbjct: 103 FKVEPC 108


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain

Query: 2 KVDPCP 7
KVD CP
Sbjct: 66 KVDECP 71




22|SequenceR|115|106|HIRKGYKVDP

>sp|ISCS_METTE|CYSTEINE desulfurase IscS|Methanosarcina thermophila

Query: 1 HIRKGYKVDP 10
+IRKG K+DP
Sbjct: 227 YIRKGVKIDP 236


>sp|COBQ_METST|PROBABLE cobyric acid synthase|Methanosphaera stadtmanae (strain ATCC

Query: 3 RKGYKVDP 10
RKGY+V P
Sbjct: 28 RKGYRVTP 35


>sp|COBQ_METTH|PROBABLE cobyric acid synthase|Methanothermobacter thermautotrophicus

Query: 3 RKGYKVDP 10
R+GY+V P
Sbjct: 30 RRGYRVAP 37


>sp|HIS82_ARCFU|HISTIDINOL-PHOSPHATE aminotransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 KGYKVDP 10
+GY+VDP
Sbjct: 129 EGYRVDP 135


>sp|COBQ_METAR|PROBABLE cobyric acid synthase|Methanocella arvoryzae (strain DSM 22066

Query: 3 RKGYKVDP 10
R+GY+V P
Sbjct: 29 RRGYRVAP 36


>sp|PGMMM_THEKO|PHOSPHOGLUCOMUTASE/PHOSPHOMANNOMUTASE kodakarensis (strain ATCC BAA-918

Query: 3 RKGYKVD 9
+KGYK+D
Sbjct: 396 KKGYKID 402


>sp|COBQ_METMP|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain DSM 14266

Query: 4 KGYKVDP 10
KGYKV P
Sbjct: 30 KGYKVAP 36


>sp|COBQ_METVO|PROBABLE cobyric acid synthase|Methanococcus voltae

Query: 4 KGYKVDP 10
KGYKV P
Sbjct: 30 KGYKVAP 36


>sp|COBQ_METM7|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C7 /

Query: 4 KGYKVDP 10
KGYKV P
Sbjct: 30 KGYKVAP 36


>sp|COBQ_METM5|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C5 /

Query: 4 KGYKVDP 10
KGYKV P
Sbjct: 30 KGYKVAP 36


>sp|COBQ_METM6|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C6 /

Query: 4 KGYKVDP 10
KGYKV P
Sbjct: 30 KGYKVAP 36


>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain

Query: 2 IRKGYKV 8
I+KGYKV
Sbjct: 79 IKKGYKV 85


>sp|MAP2_THEKO|METHIONINE aminopeptidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HIRKGYKVDP 10
HI+K YK P
Sbjct: 226 HIKKNYKTLP 235


>sp|SRP54_AERPE|SIGNAL recognition particle 54 kDa|Aeropyrum pernix (strain ATCC 700893

Query: 1 HIRKGYKV 8
++R+GYKV
Sbjct: 120 YVRRGYKV 127


>sp|ILVD_METB6|DIHYDROXY-ACID dehydratase|Methanoregula boonei (strain DSM 21154

Query: 2 IRKGYKVDP 10
IRKGY+ P
Sbjct: 9 IRKGYERAP 17


>sp|CBIA_METBF|COBYRINATE a,c-diamide synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 IRKGYKVDP 10
+ +GYKV P
Sbjct: 37 VSRGYKVQP 45


>sp|COBQ_META3|PROBABLE cobyric acid synthase|Methanococcus aeolicus (strain ATCC

Query: 4 KGYKVDP 10
KGYKV P
Sbjct: 30 KGYKVAP 36


>sp|CBIA_METAC|COBYRINATE a,c-diamide synthase|Methanosarcina acetivorans (strain ATCC

Query: 2 IRKGYKVDP 10
+ +GYKV P
Sbjct: 40 VSRGYKVQP 48


>sp|LEUC_METAC|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina

Query: 5 GYKVDP 10
GYK+DP
Sbjct: 243 GYKLDP 248


>sp|RL18A_NANEQ|LARGE ribosomal subunit protein eL20|Nanoarchaeum equitans (strain

Query: 1 HIRKGYKVDP 10
HI + Y++DP
Sbjct: 53 HIERVYELDP 62


>sp|COBQ_METJA|PROBABLE cobyric acid synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 KGYKVDP 10
KGYKV P
Sbjct: 30 KGYKVAP 36


>sp|ACDB_METTH|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanothermobacter

Query: 3 RKGYKVDP 10
R YK+DP
Sbjct: 219 RAAYKMDP 226


>sp|METE_SACS2|METHIONINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 RKGYKVD 9
RKGY VD
Sbjct: 326 RKGYSVD 332


>sp|METE_SACI7|METHIONINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 RKGYKVD 9
RKGY VD
Sbjct: 326 RKGYSVD 332


>sp|METE_SACI6|METHIONINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 RKGYKVD 9
RKGY VD
Sbjct: 326 RKGYSVD 332


>sp|METE_SACI4|METHIONINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 RKGYKVD 9
RKGY VD
Sbjct: 326 RKGYSVD 332


>sp|METE_SACI3|METHIONINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 RKGYKVD 9
RKGY VD
Sbjct: 326 RKGYSVD 332


>sp|METE_SACI2|METHIONINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 RKGYKVD 9
RKGY VD
Sbjct: 326 RKGYSVD 332


>sp|METE_SACI1|METHIONINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 RKGYKVD 9
RKGY VD
Sbjct: 326 RKGYSVD 332


>sp|AMPPA_HYPBU|AMP phosphorylase|Hyperthermus butylicus (strain DSM 5456

Query: 1 HIRKGYKV 8
H++ GY+V
Sbjct: 454 HVKTGYRV 461


>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 2 IRKGYKV 8
I KGYKV
Sbjct: 80 INKGYKV 86


>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain

Query: 2 IRKGYKV 8
I KGYKV
Sbjct: 80 INKGYKV 86


>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 2 IRKGYKV 8
I KGYKV
Sbjct: 80 INKGYKV 86


>sp|MPGP_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IRKGYKV 8
IRKG+KV
Sbjct: 159 IRKGFKV 165


>sp|RL37_METKA|LARGE ribosomal subunit protein eL37|Methanopyrus kandleri (strain AV19

Query: 1 HIRKGY 6
H+RKGY
Sbjct: 29 HVRKGY 34


>sp|SYC_PYRAB|CYSTEINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 HIRKGYKVDP 10
+RKG +V+P
Sbjct: 162 ELRKGARVEP 171


>sp|G3P_SULAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IRKGYKV 8
+RKGYK+
Sbjct: 46 MRKGYKL 52


>sp|OTC_METLZ|ORNITHINE carbamoyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 4 KGYKVDP 10
KGY+ DP
Sbjct: 183 KGYEPDP 189


>sp|TRMY_METKA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanopyrus kandleri

Query: 1 HIRKGYKVDP 10
H+R+ + DP
Sbjct: 86 HLRRALEADP 95


>sp|DP2S_ARCFU|DNA polymerase II small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 4 KGYKVDP 10
+GY +DP
Sbjct: 18 RGYNIDP 24


>sp|SYW_HYPBU|TRYPTOPHAN--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 4 KGYKVDP 10
+GY++DP
Sbjct: 2 EGYRLDP 8


>sp|SYC_PYRHO|CYSTEINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IRKGYKVDP 10
+RKG +V+P
Sbjct: 163 LRKGARVEP 171


>sp|AATA_HYPBU|A-TYPE ATP synthase subunit A|Hyperthermus butylicus (strain DSM 5456

Query: 2 IRKGYKVD 9
+R+G KVD
Sbjct: 104 VRRGVKVD 111


>sp|RNP2_METPE|RIBONUCLEASE P protein component 2|Methanosphaerula palustris (strain ATCC

Query: 1 HIRKGYKVD 9
H+R+ KVD
Sbjct: 130 HVRESQKVD 138


>sp|FRXA_PYRFU|PROTEIN FrxA|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RKGYKVDP 10
R+GYKV+
Sbjct: 16 RQGYKVEE 23




23|SequenceR|120|111|DIPLVHIRKG

>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 1 DIPLVHIR 8
DIPL HIR
Sbjct: 768 DIPLTHIR 775


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 DIPLVHIR 8
DIPL HIR
Sbjct: 763 DIPLTHIR 770


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 1 DIPLVHIR 8
DIPL HIR
Sbjct: 770 DIPLTHIR 777


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 DIPLVHIR 8
DIPL H+R
Sbjct: 764 DIPLTHVR 771


>sp|HPRL_HALUD|HGPRTASE-LIKE protein|Halorhabdus utahensis (strain DSM 12940

Query: 1 DIPLVHIRK 9
DIPLV IRK
Sbjct: 76 DIPLVVIRK 84


>sp|HPRL_HALLT|HGPRTASE-LIKE protein|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 DIPLVHIRK 9
DIPLV IRK
Sbjct: 76 DIPLVVIRK 84


>sp|HPRL2_HALJB|HGPRTASE-LIKE protein 2|Halalkalicoccus jeotgali (strain DSM 18796

Query: 1 DIPLVHIRK 9
DIPLV IRK
Sbjct: 76 DIPLVVIRK 84


>sp|HPRL2_HALTV|HGPRTASE-LIKE protein 2|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 DIPLVHIRK 9
DIPLV IRK
Sbjct: 75 DIPLVVIRK 83


>sp|HPRT_METSG|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothrix soehngenii (strain ATCC

Query: 1 DIPLVHIRK 9
DIPLV IRK
Sbjct: 76 DIPLVIIRK 84


>sp|HPRL1_HALWD|HGPRTASE-LIKE protein 1|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DIPLVHIRK 9
DIPLV IRK
Sbjct: 76 DIPLVVIRK 84


>sp|HPRL1_HALWC|HGPRTASE-LIKE protein 1|Haloquadratum walsbyi (strain DSM 16854

Query: 1 DIPLVHIRK 9
DIPLV IRK
Sbjct: 76 DIPLVVIRK 84


>sp|HPRL_HALBP|HGPRTASE-LIKE protein|Halogeometricum borinquense (strain ATCC 700274

Query: 1 DIPLVHIRK 9
DIPLV IRK
Sbjct: 76 DIPLVVIRK 84


>sp|HPRL1_HALMA|HGPRTASE-LIKE protein 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 DIPLVHIRK 9
DIPLV IRK
Sbjct: 75 DIPLVVIRK 83


>sp|HPRL1_HALJB|HGPRTASE-LIKE protein 1|Halalkalicoccus jeotgali (strain DSM 18796

Query: 1 DIPLVHIRK 9
DIPLV IRK
Sbjct: 75 DIPLVVIRK 83


>sp|HPRT_METTP|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothrix thermoacetophila (strain

Query: 1 DIPLVHIRK 9
DIPLV IRK
Sbjct: 76 DIPLVIIRK 84


>sp|HPRL_NATPD|HGPRTASE-LIKE protein|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DIPLVHIRK 9
DIPLV IRK
Sbjct: 76 DIPLVVIRK 84


>sp|IF5A_METVS|TRANSLATION initiation factor 5A|Methanococcus vannielii (strain ATCC 35089

Query: 1 DIPLVHIRKG 10
DIPL+ RKG
Sbjct: 67 DIPLIDKRKG 76


>sp|IF5A_METM7|TRANSLATION initiation factor 5A|Methanococcus maripaludis (strain C7 /

Query: 1 DIPLVHIRKG 10
DIPL+ RKG
Sbjct: 67 DIPLIDKRKG 76


>sp|HPRL1_HALVD|HGPRTASE-LIKE protein 1|Haloferax volcanii (strain ATCC 29605

Query: 1 DIPLVHIRK 9
DIPLV IRK
Sbjct: 76 DIPLVVIRK 84


>sp|HPRL2_NATMM|HGPRTASE-LIKE protein 2|Natrialba magadii (strain ATCC 43099

Query: 1 DIPLVHIRK 9
DIPLV IRK
Sbjct: 75 DIPLVVIRK 83


>sp|HPRL2_HALVD|HGPRTASE-LIKE protein 2|Haloferax volcanii (strain ATCC 29605

Query: 1 DIPLVHIRK 9
D+PLV IRK
Sbjct: 75 DVPLVVIRK 83


>sp|RPO3_METMA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina mazei (strain ATCC

Query: 1 DIPLVHIRKG 10
+IP+V ++KG
Sbjct: 125 NIPIVELKKG 134


>sp|HPRL2_HALMA|HGPRTASE-LIKE protein 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 DIPLVHIRK 9
DIPLV +RK
Sbjct: 76 DIPLVVVRK 84


>sp|IF5A_METM5|TRANSLATION initiation factor 5A|Methanococcus maripaludis (strain C5 /

Query: 1 DIPLVHIRKG 10
D+PL+ RKG
Sbjct: 67 DVPLIDKRKG 76


>sp|HPRL_HALMD|HGPRTASE-LIKE protein|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 DIPLVHIRK 9
DIPLV +RK
Sbjct: 76 DIPLVVVRK 84


>sp|HPRL2_HALWD|HGPRTASE-LIKE protein 2|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DIPLVHIRK 9
D+PLV IRK
Sbjct: 75 DVPLVVIRK 83


>sp|HPRL2_HALWC|HGPRTASE-LIKE protein 2|Haloquadratum walsbyi (strain DSM 16854

Query: 1 DIPLVHIRK 9
D+PLV IRK
Sbjct: 75 DVPLVVIRK 83


>sp|IF5A_META3|TRANSLATION initiation factor 5A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DIPLVHIRKG 10
D+PL+ RKG
Sbjct: 67 DVPLIDKRKG 76


>sp|IF5A_METMP|TRANSLATION initiation factor 5A|Methanococcus maripaludis (strain DSM 14266

Query: 1 DIPLVHIRKG 10
D+PL+ RKG
Sbjct: 67 DVPLIDKRKG 76


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 1 DIPLVHIR 8
D+PL H R
Sbjct: 762 DLPLTHFR 769


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 DIPLVHIR 8
DIP+ H R
Sbjct: 716 DIPITHFR 723


>sp|APAUH_THEKO|N(1)-AMINOPROPYLAGMATINE ureohydrolase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DIPLVHIR 8
DIP VH R
Sbjct: 183 DIPWVHAR 190


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 DIPLVHIR 8
DIP+ H R
Sbjct: 711 DIPITHFR 718


>sp|RPO3_METAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina acetivorans (strain ATCC

Query: 1 DIPLVHIRKG 10
++P+V ++KG
Sbjct: 125 NVPIVELKKG 134


>sp|Y2328_HALVD|UNCHARACTERIZED isochorismatase family protein HVO_2328|Haloferax volcanii

Query: 1 DIPLVHIR 8
D P+VH+R
Sbjct: 49 DRPVVHVR 56


>sp|HPRL_HALSA|HGPRTASE-LIKE protein|Halobacterium salinarum (strain ATCC 700922

Query: 1 DIPLVHIRK 9
DIP+V IRK
Sbjct: 76 DIPIVVIRK 84


>sp|HPRL_HALS3|HGPRTASE-LIKE protein|Halobacterium salinarum (strain ATCC 29341

Query: 1 DIPLVHIRK 9
DIP+V IRK
Sbjct: 76 DIPIVVIRK 84


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 DIPLVHIR 8
D+PL H R
Sbjct: 743 DLPLTHFR 750


>sp|RPO3_METST|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosphaera stadtmanae (strain ATCC

Query: 2 IPLVHIRKG 10
IP+V +R+G
Sbjct: 127 IPIVRLREG 135


>sp|IF5A_METM6|TRANSLATION initiation factor 5A|Methanococcus maripaludis (strain C6 /

Query: 1 DIPLVHIRKG 10
DIP++ RKG
Sbjct: 67 DIPIIDKRKG 76


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 1 DIPLVHIR 8
D+PL H R
Sbjct: 732 DLPLTHFR 739


>sp|HPRT_METIM|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanocaldococcus infernus (strain DSM

Query: 1 DIPLVHIRK 9
DIP V IRK
Sbjct: 75 DIPFVIIRK 83


>sp|RPO3_PICTO|DNA-DIRECTED RNA polymerase subunit Rpo3|Picrophilus torridus (strain ATCC

Query: 2 IPLVHIRKG 10
IP+V ++KG
Sbjct: 134 IPIVKLKKG 142


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 DIPLVHIR 8
D+PL H R
Sbjct: 745 DMPLTHFR 752


>sp|HPRL1_NATMM|HGPRTASE-LIKE protein 1|Natrialba magadii (strain ATCC 43099

Query: 1 DIPLVHIRK 9
DIPL IRK
Sbjct: 76 DIPLTVIRK 84


>sp|HPRL1_HALTV|HGPRTASE-LIKE protein 1|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 DIPLVHIRK 9
DIPL IRK
Sbjct: 76 DIPLTVIRK 84


>sp|COBQ_METST|PROBABLE cobyric acid synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 PLVHIRKG 10
PL+ I+KG
Sbjct: 410 PLIKIKKG 417


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 DIPLVHIR 8
D PL H+R
Sbjct: 861 DCPLTHVR 868


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 DIPLVHIR 8
D+P+ H R
Sbjct: 754 DVPVTHFR 761


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 DIPLVHIR 8
D+P+ H R
Sbjct: 754 DVPVTHFR 761


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 DIPLVHIR 8
D+P+ H R
Sbjct: 754 DVPVTHFR 761


>sp|HPRT_METAR|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanocella arvoryzae (strain DSM

Query: 1 DIPLVHIRK 9
DIP + IRK
Sbjct: 76 DIPFIIIRK 84


>sp|HPRT_METPS|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanocella paludicola (strain DSM

Query: 1 DIPLVHIRK 9
DIP + IRK
Sbjct: 76 DIPFIIIRK 84


>sp|GFCR_METMA|TRANSCRIPTIONAL regulator GfcR|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DIPLVHIRKG 10
D L H RKG
Sbjct: 114 DFALYHSRKG 123


>sp|GFCR1_METBF|TRANSCRIPTIONAL regulator GfcR 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 DIPLVHIRKG 10
D L H RKG
Sbjct: 114 DFALYHSRKG 123


>sp|GFCR1_METAC|TRANSCRIPTIONAL regulator GfcR 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DIPLVHIRKG 10
D L H RKG
Sbjct: 114 DFALYHSRKG 123




24|SequenceR|125|116|GEVTDDIPLV

>sp|DPOL3_SACSH|DNA polymerase 3|Saccharolobus shibatae (strain ATCC 51178

Query: 2 EVTDDIPLV 10
E+ D+IPL+
Sbjct: 13 EIKDNIPLI 21


>sp|DADD_METM5|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C5 /

Query: 3 VTDDIPLV 10
V DDIPL+
Sbjct: 68 VADDIPLM 75


>sp|DADD_METVS|5'-DEOXYADENOSINE deaminase|Methanococcus vannielii (strain ATCC 35089

Query: 3 VTDDIPLV 10
V DDIPL+
Sbjct: 68 VADDIPLM 75


>sp|DADD_METMP|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain DSM 14266

Query: 3 VTDDIPLV 10
V DDIPL+
Sbjct: 68 VADDIPLM 75


>sp|TOP6B_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VTDDIP 8
VTDDIP
Sbjct: 214 VTDDIP 219


>sp|DADD_METM6|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C6 /

Query: 3 VTDDIPLV 10
V DDIPL+
Sbjct: 68 VADDIPLM 75


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GEVTDDIPL 9
GEV D+PL
Sbjct: 340 GEVVGDLPL 348


>sp|DADD_METM7|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C7 /

Query: 3 VTDDIPLV 10
V DDIPL+
Sbjct: 68 VADDIPLM 75


>sp|MTRD_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina acetivorans (strain

Query: 3 VTDDIPLV 10
VTD++PL+
Sbjct: 69 VTDNLPLI 76


>sp|MTRD_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina barkeri (strain

Query: 3 VTDDIPLV 10
VTD++PL+
Sbjct: 69 VTDNLPLI 76


>sp|HPRT_METIM|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanocaldococcus infernus (strain DSM

Query: 3 VTDDIPLV 10
+TD IPLV
Sbjct: 25 ITDGIPLV 32


>sp|Y1344_SULAC|PUTATIVE HTH-type transcriptional regulatory protein|Sulfolobus

Query: 2 EVTDDIPLV 10
EVT+ +PL+
Sbjct: 69 EVTESLPLI 77


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GEVTDDIPLV 10
GE+TDD +V
Sbjct: 459 GELTDDYVVV 468


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 1 GEVTDDI 7
GE TDD+
Sbjct: 220 GEATDDV 226


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 1 GEVTDDI 7
GE TDD+
Sbjct: 220 GEATDDV 226


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 GEVTDDI 7
GE TDD+
Sbjct: 220 GEATDDV 226


>sp|RPO10_PYRAR|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrobaculum arsenaticum (strain DSM

Query: 1 GEVTDDIPLV 10
G+V DD+ LV
Sbjct: 32 GKVLDDLGLV 41


>sp|DADD_META3|5'-DEOXYADENOSINE deaminase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 VTDDIPLV 10
V DD+PL+
Sbjct: 70 VADDLPLM 77


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 GEVTDDI 7
GE TDD+
Sbjct: 220 GEATDDV 226


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 GEVTDDI 7
GE TDD+
Sbjct: 220 GEATDDV 226


>sp|DADD_METJA|5'-DEOXYADENOSINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VTDDIPLV 10
V DD+PL+
Sbjct: 66 VADDLPLM 73


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain ATCC

Query: 2 EVTDDIPL 9
EVTD +PL
Sbjct: 435 EVTDLVPL 442


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 GEVTDDI 7
GE TDD+
Sbjct: 220 GEATDDV 226


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 1 GEVTDDI 7
GE TDD+
Sbjct: 223 GEATDDV 229


>sp|PURL_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GEVTDDIPLV 10
GE+ DIP+
Sbjct: 343 GEIVADIPIA 352


>sp|DNLI_THEAC|DNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 EVTDDIPLV 10
E DD+PL+
Sbjct: 32 EADDDLPLL 40




25|SequenceR|130|121|LNGTIGEVTD

>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LNGTIGEVTD 10
+N IGEVTD
Sbjct: 718 VNSLIGEVTD 727


>sp|CAPPA_METMA|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LNGTIGEVTD 10
+ GT+GE+ D
Sbjct: 124 MTGTVGEILD 133


>sp|END3_SULAC|ENDONUCLEASE III|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LNGTIGEVT 9
LN T+GE+T
Sbjct: 59 LNETVGEIT 67


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 LNGTIGEV 8
+NG IGE+
Sbjct: 633 MNGKIGEI 640


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 LNGTIGEV 8
+NG IGE+
Sbjct: 632 MNGKIGEI 639


>sp|EF1A_NANEQ|ELONGATION factor 1-alpha|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 NGTIGEV 8
NG IGEV
Sbjct: 267 NGAIGEV 273


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LNGTIGEVTD 10
L+G IGE T+
Sbjct: 901 LSGVIGEQTN 910


>sp|DCHI_THEKO|DIACETYLCHITOBIOSE deacetylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LNGTIGEVTD 10
L GTI ++TD
Sbjct: 48 LGGTIKKLTD 57


>sp|RADA_METMP|DNA repair and recombination protein|Methanococcus maripaludis

Query: 3 GTIGEVTD 10
TIGE+TD
Sbjct: 33 ATIGELTD 40


>sp|RADA_METMI|DNA repair and recombination protein|Methanococcus maripaludis

Query: 3 GTIGEVTD 10
TIGE+TD
Sbjct: 33 ATIGELTD 40


>sp|RADA_METM5|DNA repair and recombination protein|Methanococcus maripaludis

Query: 4 TIGEVTD 10
TIGE+TD
Sbjct: 34 TIGELTD 40


>sp|RFHPS_ARCFU|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LNGTIGEV 8
LNG+IG V
Sbjct: 17 LNGSIGRV 24


>sp|RADA_METM7|DNA repair and recombination protein|Methanococcus maripaludis

Query: 3 GTIGEVTD 10
TIGE+TD
Sbjct: 33 ATIGELTD 40


>sp|SEPS_METAC|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LNGTIGEVTD 10
+NG +G++ D
Sbjct: 115 INGILGDIGD 124


>sp|RADA_METM6|DNA repair and recombination protein|Methanococcus maripaludis

Query: 4 TIGEVTD 10
TIGE+TD
Sbjct: 34 TIGELTD 40




26|SequenceR|135|126|LYVEFLNGTI

>sp|PANE_ARCFU|2-DEHYDROPANTOATE 2-reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VEFLNGTI 10
VEF+NG I
Sbjct: 259 VEFINGAI 266


>sp|SURE_METS3|5'-NUCLEOTIDASE SurE|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 YVEFLNGTI 10
Y++F NGT+
Sbjct: 135 YIKFENGTV 143


>sp|Y436_PYRFU|KELCH domain-containing protein PF0436|Pyrococcus furiosus (strain ATCC

Query: 1 LYVEFLNGTI 10
L+V FLNG +
Sbjct: 165 LFVRFLNGNL 174


>sp|Y4032_METAC|UPF0228 protein MA_4032|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LYVEFLNGT 9
+YV+F NGT
Sbjct: 44 IYVQFENGT 52


>sp|Y661_METJA|UNCHARACTERIZED protein MJ0661|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YVEFLNGTI 10
YV F NG I
Sbjct: 63 YVRFFNGYI 71


>sp|TRPB2_AERPE|TRYPTOPHAN synthase beta chain 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 YVEFLNGTI 10
Y E+L+GT+
Sbjct: 428 YREYLDGTL 436


>sp|SFSA_ARCFU|SUGAR fermentation stimulation protein homolog|Archaeoglobus fulgidus

Query: 1 LYVEFLNGTI 10
+ VE+LNG +
Sbjct: 199 IQVEYLNGKV 208


>sp|NTPPA_THEON|DTTP/UTP pyrophosphatase|Thermococcus onnurineus (strain NA1)

Query: 1 LYVEFLNG 8
L+VE++NG
Sbjct: 153 LFVEWING 160


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 3 VEFLNGTI 10
+EF+NG I
Sbjct: 212 IEFINGEI 219


>sp|Y3508_METJA|PROBABLE helicase MJECL08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LYVEFLNGT 9
+Y+E+ +GT
Sbjct: 291 IYIEYYDGT 299


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 3 VEFLNGTI 10
+EF NGT+
Sbjct: 631 IEFANGTM 638


>sp|SLAB_SACS2|S-LAYER protein B|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YVEFLNGTI 10
++EF NG I
Sbjct: 148 FIEFANGII 156


>sp|Y1331_METJA|ACYLPHOSPHATASE-LIKE protein MJ1331|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YVEFLNG 8
Y+EF NG
Sbjct: 88 YIEFPNG 94


>sp|AGLB1_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LYVEFLNGT 9
LYV LNGT
Sbjct: 775 LYVYALNGT 783




27|SequenceR|140|131|LFYPKLYVEF

>sp|ALADH_ARCFU|ALANINE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PKLYVEF 10
PK+Y+EF
Sbjct: 40 PKVYLEF 46


>sp|LYSY_AERPE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 FYPKLY 7
YPKLY
Sbjct: 112 LYPKLY 117


>sp|ACD1_ARCFU|ACETATE--COA ligase [ADP-forming] I|Archaeoglobus fulgidus (strain ATCC

Query: 1 LFYPKL 6
LFYPK+
Sbjct: 4 LFYPKV 9


>sp|ENO_SULTO|ENOLASE tokodaii (strain DSM 16993

Query: 3 YPKLYVE 9
YP LY+E
Sbjct: 274 YPLLYIE 280




28|SequenceR|145|136|PRYAELFYPK

>sp|GSA_NATPD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 RYAELFYPK 10
RYA LF PK
Sbjct: 400 RYARLFRPK 408


>sp|ACD2_ARCFU|ACETATE--COA ligase [ADP-forming] II|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PRYAELFYPK 10
P +LFYPK
Sbjct: 216 PDLRDLFYPK 225


>sp|ARGD_METJA|ACETYLORNITHINE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PRYAELFYP 9
P+Y + FYP
Sbjct: 152 PKYQDGFYP 160


>sp|NNR_KORCO|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Korarchaeum cryptofilum (strain

Query: 1 PRYAELFYP 9
P+Y + YP
Sbjct: 184 PKYGNILYP 192


>sp|DPHB_THEAC|DIPHTHINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PRYAELFYP 9
PR +E F+P
Sbjct: 134 PRISEKFFP 142


>sp|Y1633_METJA|UNCHARACTERIZED protein MJ1633|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PRYAELF 7
PRY EL+
Sbjct: 101 PRYPELY 107


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PRYAELF 7
P YAE+F
Sbjct: 283 PEYAEIF 289


>sp|SFSA_PYRNV|SUGAR fermentation stimulation protein homolog|Pyrobaculum neutrophilum

Query: 2 RYAELFYP 9
R AEL YP
Sbjct: 44 RLAELLYP 51


>sp|PPS_THEON|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Thermococcus onnurineus (strain NA1)

Query: 1 PRYAELFY 8
PRY L+Y
Sbjct: 9 PRYWSLYY 16


>sp|Y2310_ARCFU|MEMO1 family protein AF_2310|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PRYAELFYP 9
PR A FYP
Sbjct: 4 PRVAGSFYP 12


>sp|RS8E_PYRIL|SMALL ribosomal subunit protein eS8|Pyrobaculum islandicum (strain DSM

Query: 2 RYAELFYPK 10
RYA ++ PK
Sbjct: 65 RYANVYIPK 73


>sp|TRUA_METS3|TRNA pseudouridine synthase A|Methanobrevibacter smithii (strain ATCC

Query: 1 PRYAEL 6
PRYAE+
Sbjct: 101 PRYAEM 106




29|SequenceR|150|141|DGKRIPRYAE

>sp|Y507_METTH|UPF0145 protein MTH_507|Methanothermobacter thermautotrophicus (strain

Query: 1 DGKRIPRY 8
DGKRI RY
Sbjct: 10 DGKRISRY 17


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GKRIPRYAE 10
GK +P++A+
Sbjct: 882 GKEVPKFAQ 890


>sp|APEH_AERPE|ACYLAMINO-ACID-RELEASING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 DGKRIPRY 8
DG R+P Y
Sbjct: 342 DGSRVPTY 349


>sp|NADK_METST|NAD kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 KRIPRYAE 10
K++P+Y+E
Sbjct: 40 KKLPQYSE 47


>sp|DUT_METKA|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanopyrus

Query: 1 DGKRIPRYAE 10
D KR+P Y E
Sbjct: 45 DDKRLPEYRE 54


>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DGKRIPRY 8
+GKRIP +
Sbjct: 835 EGKRIPEF 842


>sp|FOLCP_HALVD|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 1 DGKRIPRYA 9
DG++IP+ A
Sbjct: 86 DGRKIPKSA 94


>sp|SYL_PYRAR|LEUCINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 DGKRIPRYAE 10
D K+IP Y E
Sbjct: 823 DVKKIPAYGE 832


>sp|MDH_PYRIL|MALATE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GKRIPRYA 9
GK I RYA
Sbjct: 101 GKEIKRYA 108


>sp|RS2_METHJ|SMALL ribosomal subunit protein uS2|Methanospirillum hungatei JF-1

Query: 5 IPRYAE 10
+PRYAE
Sbjct: 114 LPRYAE 119


>sp|Y963_METJA|UNCHARACTERIZED protein MJ0963|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DGKRIP 6
DGK+IP
Sbjct: 480 DGKKIP 485


>sp|RRP42_AERPE|EXOSOME complex component Rrp42|Aeropyrum pernix (strain ATCC 700893

Query: 4 RIPRYAE 10
R+PRY E
Sbjct: 169 RLPRYEE 175


>sp|PUR2_ARCFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DGKRIP 6
DGK+IP
Sbjct: 49 DGKKIP 54


>sp|SRP19_METB6|SIGNAL recognition particle 19 kDa|Methanoregula boonei (strain DSM

Query: 1 DGKRIPR 7
+G+R+PR
Sbjct: 21 EGRRVPR 27




30|SequenceR|155|146|RVLFIDGKRI

>sp|ACTH_THEVO|ARCHAEAL actin homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RVLFIDGKRI 10
+V+ IDGKRI
Sbjct: 14 KVIGIDGKRI 23


>sp|CDPAS_ARCFU|CDP-ARCHAEOL synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 FIDGKRI 10
F+DGKRI
Sbjct: 37 FVDGKRI 43


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VLFIDGKRI 10
+LF DG+R+
Sbjct: 183 ILFADGRRV 191


>sp|ACTH_THEAC|ARCHAEAL actin homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RVLFIDGKRI 10
+V+ +DGKRI
Sbjct: 14 KVIGVDGKRI 23


>sp|MER_METMA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 FIDGKRI 10
FIDGK++
Sbjct: 124 FIDGKKV 130


>sp|COBS_PYRCJ|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 LFIDGKR 9
LFIDG R
Sbjct: 147 LFIDGAR 153


>sp|APEH_AERPE|ACYLAMINO-ACID-RELEASING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 3 LFIDGKRI 10
+FIDG+R+
Sbjct: 271 VFIDGERV 278


>sp|CDPAS_PYRAE|CDP-ARCHAEOL synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 FIDGKRI 10
FIDG+RI
Sbjct: 38 FIDGRRI 44


>sp|CDPAS_THEVO|CDP-ARCHAEOL synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 FIDGKRI 10
FIDG+RI
Sbjct: 39 FIDGRRI 45


>sp|FOLD_METPE|BIFUNCTIONAL protein FolD|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 LFIDGKRI 10
+ IDGKR+
Sbjct: 1 MIIDGKRV 8


>sp|DNAG_THEPD|DNA primase DnaG|Thermofilum pendens (strain DSM 2475

Query: 2 VLFIDGKR 9
+LF+DG R
Sbjct: 215 ILFVDGDR 222


>sp|CDPAS_THEAC|CDP-ARCHAEOL synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 FIDGKRI 10
FIDG+RI
Sbjct: 32 FIDGRRI 38


>sp|LADH_METMP|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 3 LFIDGKRI 10
+FIDGK I
Sbjct: 1 MFIDGKWI 8


>sp|DNAG_AERPE|DNA primase DnaG|Aeropyrum pernix (strain ATCC 700893

Query: 2 VLFIDGKR 9
+LF+DG R
Sbjct: 214 ILFVDGDR 221


>sp|PUR2_THEGJ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 LFIDGKRI 10
+F DGKR+
Sbjct: 197 VFTDGKRV 204


>sp|CDPAS_PYRCJ|CDP-ARCHAEOL synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 FIDGKRI 10
F+DG+RI
Sbjct: 39 FLDGRRI 45


>sp|LADH_METVS|LACTALDEHYDE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 3 LFIDGKRI 10
+FIDGK I
Sbjct: 1 MFIDGKWI 8


>sp|LADH_METM5|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 3 LFIDGKRI 10
+FIDGK I
Sbjct: 1 MFIDGKWI 8


>sp|SYY_PYRCJ|TYROSINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 LFIDGKRI 10
L +DGKRI
Sbjct: 210 LTVDGKRI 217


>sp|DNAG_NANEQ|DNA primase DnaG|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 VLFIDGKR 9
LFIDG R
Sbjct: 217 TLFIDGDR 224


>sp|CDPAS_PYRIL|CDP-ARCHAEOL synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 FIDGKRI 10
F+DG+RI
Sbjct: 38 FVDGRRI 44


>sp|LADH_METM7|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 3 LFIDGKRI 10
+FIDGK I
Sbjct: 1 MFIDGKWI 8


>sp|NK_THEAC|NUCLEOSIDE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 LFIDGKR 9
LF+DGK+
Sbjct: 204 LFMDGKK 210


>sp|PUR2_THEKO|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LFIDGKRI 10
+F DGKR+
Sbjct: 196 VFTDGKRV 203


>sp|Y507_METTH|UPF0145 protein MTH_507|Methanothermobacter thermautotrophicus (strain

Query: 5 IDGKRI 10
IDGKRI
Sbjct: 9 IDGKRI 14


>sp|LADH_METJA|LACTALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LFIDGKRI 10
+FIDGK I
Sbjct: 1 MFIDGKWI 8


>sp|SYY_PYRIL|TYROSINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 LFIDGKRI 10
L +DGKRI
Sbjct: 210 LKVDGKRI 217


>sp|PCP_PYRAB|PYRROLIDONE-CARBOXYLATE peptidase|Pyrococcus abyssi (strain GE5 /

Query: 2 VLFIDGKRI 10
V F+DGK I
Sbjct: 23 VKFLDGKEI 31


>sp|CDPAS_PYRAR|CDP-ARCHAEOL synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 FIDGKRI 10
F+DG+R+
Sbjct: 38 FVDGRRL 44


>sp|HELS_THEAC|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 LFIDGKR 9
L++DGKR
Sbjct: 213 LYLDGKR 219


>sp|Y055_KORCO|UPF0173 metal-dependent hydrolase Kcr_0055|Korarchaeum cryptofilum (strain

Query: 2 VLFIDGKRI 10
V+ +DGKR+
Sbjct: 121 VIELDGKRV 129


>sp|RAD50_METMA|DNA double-strand break repair Rad50|Methanosarcina mazei (strain ATCC

Query: 2 VLFIDGKRI 10
VLF DG+ I
Sbjct: 104 VLFADGENI 112




31|SequenceR|160|151|ARMGGRVLFI

>sp|TRPE_AERPE|ANTHRANILATE synthase component 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 ARMGGRVL 8
AR+GGRV+
Sbjct: 225 ARLGGRVI 232


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 RMGGRVLFI 10
RMG VLFI
Sbjct: 41 RMGHDVLFI 49


>sp|PYRB_CALMQ|ASPARTATE carbamoyltransferase catalytic subunit|Caldivirga maquilingensis

Query: 2 RMGGRVL 8
R+GGRVL
Sbjct: 66 RLGGRVL 72


>sp|KHK_HALVD|KETOHEXOKINASE volcanii (strain ATCC 29605

Query: 4 GGRVLF 9
GGRVLF
Sbjct: 25 GGRVLF 30


>sp|PELO_AERPE|PROTEIN pelota homolog|Aeropyrum pernix (strain ATCC 700893

Query: 3 MGGRVLFI 10
MGGRV+ I
Sbjct: 318 MGGRVIII 325


>sp|RS4E_HYPBU|SMALL ribosomal subunit protein eS4|Hyperthermus butylicus (strain

Query: 1 ARMGGR 6
ARMGGR
Sbjct: 2 ARMGGR 7




32|SequenceR|165|156|VKFEVARMGG

>sp|PUR7_PYRCJ|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VKFEVARMGG 10
VKFE R+GG
Sbjct: 175 VKFEFGRVGG 184


>sp|K6PF_METJA|BIFUNCTIONAL ADP-specific glucokinase/phosphofructokinase|Methanocaldococcus

Query: 1 VKFEVARMGG 10
+K++ RMGG
Sbjct: 98 IKYDEERMGG 107


>sp|PUR7_PYRAE|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VKFEVARMGG 10
VKFE R GG
Sbjct: 171 VKFEFGRRGG 180


>sp|RPO6_METJA|DNA-DIRECTED RNA polymerase subunit Rpo6|Methanocaldococcus jannaschii (strain

Query: 2 KFEVARMGG 10
KFE+AR+ G
Sbjct: 5 KFEIARILG 13


>sp|AMPPA_THEPD|AMP phosphorylase|Thermofilum pendens (strain DSM 2475

Query: 3 FEVARMGG 10
FE+ARM G
Sbjct: 301 FEIARMFG 308




33|SequenceR|170|161|PDTEVVKFEV

>sp|SYS_METS5|SERINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 PDTEVVKFE 9
PD E++KF+
Sbjct: 149 PDYEIIKFK 157


>sp|RPO11_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo11|Pyrobaculum aerophilum (strain ATCC

Query: 1 PDTEVVKFEV 10
PD E V+F+V
Sbjct: 40 PDVEYVQFDV 49


>sp|RL11_KORCO|LARGE ribosomal subunit protein uL11|Korarchaeum cryptofilum (strain

Query: 2 DTEVVKFEV 10
DTE KFE+
Sbjct: 58 DTETKKFEI 66


>sp|CBIT_HALSA|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 3 TEVVKFEV 10
TEVV+F+V
Sbjct: 147 TEVVQFQV 154


>sp|RL11_METJA|LARGE ribosomal subunit protein uL11|Methanocaldococcus jannaschii

Query: 2 DTEVVKFEV 10
DTE KFE+
Sbjct: 58 DTETRKFEI 66


>sp|PURP_THEKO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Thermococcus kodakarensis (strain ATCC

Query: 1 PDTEVVKFEV 10
PD E V FE+
Sbjct: 272 PDMEFVVFEI 281


>sp|RL10E_STAMF|LARGE ribosomal subunit protein uL16|Staphylothermus marinus (strain

Query: 1 PDTEVVKFEV 10
P ++VKFE+
Sbjct: 27 PQPKIVKFEM 36


>sp|PURP_PYRHO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus horikoshii (strain ATCC

Query: 1 PDTEVVKFEV 10
PD E V FE+
Sbjct: 274 PDMEFVVFEI 283


>sp|IF2B_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 1 PDTEVVK 7
PDT+++K
Sbjct: 116 PDTKIIK 122


>sp|PURP_PYRFU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PDTEVVKFEV 10
PD E V FE+
Sbjct: 275 PDLEFVVFEI 284


>sp|IF2B_METMP|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain DSM

Query: 1 PDTEVVK 7
PDT++VK
Sbjct: 111 PDTKIVK 117


>sp|IF2B_METM5|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C5 /

Query: 1 PDTEVVK 7
PDT++VK
Sbjct: 111 PDTKIVK 117


>sp|IF2B_METM7|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C7 /

Query: 1 PDTEVVK 7
PDT++VK
Sbjct: 111 PDTKIVK 117


>sp|IF2B_METM6|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C6 /

Query: 1 PDTEVVK 7
PDT++VK
Sbjct: 111 PDTKIVK 117




34|SequenceR|175|166|ICYPSPDTEV

>sp|IF2B_PICTO|TRANSLATION initiation factor 2 subunit|Picrophilus torridus (strain ATCC

Query: 1 ICY--PSPDTEV 10
ICY SPDTE+
Sbjct: 102 ICYECKSPDTEI 113


>sp|RL10_SACS2|LARGE ribosomal subunit protein uL10|Saccharolobus solfataricus (strain

Query: 1 ICYPSPD 7
I YP+PD
Sbjct: 234 IAYPTPD 240


>sp|Y2000_PYRAB|UNCHARACTERIZED protein Orf2|Pyrococcus abyssi (strain GE5 /

Query: 3 YPSPD 7
YPSPD
Sbjct: 150 YPSPD 154


>sp|TRPA_AERPE|TRYPTOPHAN synthase alpha chain|Aeropyrum pernix (strain ATCC 700893

Query: 1 ICYPSPDT 8
I +PSPDT
Sbjct: 14 IAWPSPDT 21


>sp|RL10_PYRAB|LARGE ribosomal subunit protein uL10|Pyrococcus abyssi (strain GE5 /

Query: 1 ICYPSPDT 8
I YP+P+T
Sbjct: 231 IAYPTPET 238


>sp|RL10_PYRHO|LARGE ribosomal subunit protein uL10|Pyrococcus horikoshii (strain ATCC

Query: 1 ICYPSPDT 8
I YP+P+T
Sbjct: 231 IAYPTPET 238


>sp|FTSY_HALVD|SIGNAL recognition particle receptor FtsY|Haloferax volcanii (strain ATCC

Query: 4 PSPDTEV 10
P PD+EV
Sbjct: 110 PEPDSEV 116


>sp|SURE_PYRAR|5'-NUCLEOTIDASE SurE|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 PSPDTEV 10
P PDT+V
Sbjct: 217 PEPDTDV 223


>sp|CBID_METTH|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanothermobacter thermautotrophicus

Query: 3 YPSPDTEV 10
YP PD V
Sbjct: 67 YPDPDVTV 74


>sp|RL10_PYRFU|LARGE ribosomal subunit protein uL10|Pyrococcus furiosus (strain ATCC

Query: 1 ICYPSPDT 8
I YP+P T
Sbjct: 231 IAYPTPQT 238


>sp|Y812_ARCFU|UNCHARACTERIZED protein AF_0812|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ICYPSPDTEV 10
I Y SPD EV
Sbjct: 181 IAYISPDGEV 190


>sp|ARCH_METAC|PROTEIN archease|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ICYPSPDTE 9
+C SPD E
Sbjct: 55 VCLTSPDLE 63


>sp|WECC_META3|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 ICYPSPDT 8
IC P+P T
Sbjct: 89 ICVPTPAT 96


>sp|TRPB2_METMA|TRYPTOPHAN synthase beta chain 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 PSPDTE 9
PSPDTE
Sbjct: 195 PSPDTE 200


>sp|TRPB2_METAC|TRYPTOPHAN synthase beta chain 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 PSPDTE 9
PSPDTE
Sbjct: 195 PSPDTE 200


>sp|MOAC_ARCFU|PROBABLE cyclic pyranopterin monophosphate synthase|Archaeoglobus fulgidus

Query: 1 ICYPSPDTEV 10
+C+P P T V
Sbjct: 73 MCHPIPITSV 82


>sp|ARSD_HALSA|PUTATIVE arsenical resistance operon repressor|Halobacterium salinarum

Query: 1 ICYPSPDTEV 10
+C P PD E+
Sbjct: 17 VCGPDPDDEL 26


>sp|PUR7_HALSA|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 1 ICYPSPD 7
+C PSPD
Sbjct: 292 LCEPSPD 298


>sp|MOAC_METJA|PROBABLE cyclic pyranopterin monophosphate synthase|Methanocaldococcus

Query: 1 ICYPSPDTEV 10
+C+P P T V
Sbjct: 72 MCHPLPITSV 81


>sp|CSG_HALSA|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 700922

Query: 2 CYPSPDTE 9
YP+ DTE
Sbjct: 377 LYPASDTE 384


>sp|CSG_HALS3|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 29341

Query: 2 CYPSPDTE 9
YP+ DTE
Sbjct: 377 LYPASDTE 384


>sp|KORA_METTH|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter thermautotrophicus

Query: 3 YPSPDTEV 10
+P P+TEV
Sbjct: 310 WPFPETEV 317


>sp|TRPB_DESA1|TRYPTOPHAN synthase beta chain|Desulfurococcus amylolyticus (strain DSM 18924

Query: 3 YPSPDTE 9
YPSP T+
Sbjct: 181 YPSPSTK 187




35|SequenceR|180|171|TDPAVICYPS

>sp|GATB_SULAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfolobus acidocaldarius (strain ATCC

Query: 2 DPAVICYPS 10
DPA I YP+
Sbjct: 126 DPAKIVYPT 134


>sp|GATB_SACS2|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 2 DPAVICYPS 10
DPA I YP+
Sbjct: 125 DPAKIVYPT 133


>sp|GATB_SULTO|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfurisphaera tokodaii (strain DSM

Query: 2 DPAVICYPS 10
DPA I YP+
Sbjct: 126 DPAKIIYPT 134


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 1 TDPAVICY 8
TDP +CY
Sbjct: 719 TDPRYVCY 726


>sp|Y665_METJA|UNCHARACTERIZED protein MJ0665|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PAVICYP 9
P V CYP
Sbjct: 277 PTVSCYP 283


>sp|NADA2_METAC|QUINOLINATE synthase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DPAVICY 8
D AV+CY
Sbjct: 112 DAAVVCY 118


>sp|Y1640_METAR|UPF0597 protein UNCMA_16400|Methanocella arvoryzae (strain DSM 22066

Query: 1 TDPAVIC 7
TDP +C
Sbjct: 24 TDPGAVC 30


>sp|DTDA_METLZ|D-AMINOACYL-TRNA deacylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 DPAVICYPS 10
DPAV+ PS
Sbjct: 300 DPAVVELPS 308


>sp|Y964_METJA|UNCHARACTERIZED protein MJ0964|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DPAVICY 8
DP +CY
Sbjct: 365 DPGPVCY 371


>sp|MTXA_METAC|PUTATIVE methyltransferase Mtx subunit A|Methanosarcina acetivorans (strain

Query: 2 DPAVICYP 9
+P V+C P
Sbjct: 154 EPVVVCAP 161


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TDPAVICY 8
TDP +I Y
Sbjct: 42 TDPNIIAY 49




36|SequenceR|185|176|ECHIVTDPAV

>sp|RL21_METKA|LARGE ribosomal subunit protein eL21|Methanopyrus kandleri (strain AV19

Query: 3 HIVTDPAV 10
HIV DP+V
Sbjct: 42 HIVIDPSV 49


>sp|RL21_METJA|LARGE ribosomal subunit protein eL21|Methanocaldococcus jannaschii

Query: 3 HIVTDPAV 10
HIV DP+V
Sbjct: 42 HIVIDPSV 49


>sp|RL21_METVS|LARGE ribosomal subunit protein eL21|Methanococcus vannielii (strain

Query: 3 HIVTDPAV 10
H+V DP+V
Sbjct: 41 HVVIDPSV 48


>sp|RL21_METMP|LARGE ribosomal subunit protein eL21|Methanococcus maripaludis (strain

Query: 3 HIVTDPAV 10
H+V DP+V
Sbjct: 41 HVVLDPSV 48


>sp|RL21_METM7|LARGE ribosomal subunit protein eL21|Methanococcus maripaludis (strain

Query: 3 HIVTDPAV 10
H+V DP+V
Sbjct: 41 HVVLDPSV 48


>sp|RL21_METM6|LARGE ribosomal subunit protein eL21|Methanococcus maripaludis (strain

Query: 3 HIVTDPAV 10
H+V DP+V
Sbjct: 41 HVVLDPSV 48


>sp|RL21_METM5|LARGE ribosomal subunit protein eL21|Methanococcus maripaludis (strain

Query: 3 HIVTDPAV 10
H+V DP+V
Sbjct: 41 HVVLDPSV 48


>sp|RL21_METTH|LARGE ribosomal subunit protein eL21|Methanothermobacter

Query: 3 HIVTDPAV 10
HI+ DP++
Sbjct: 41 HIIIDPSI 48


>sp|RL21_STAMF|LARGE ribosomal subunit protein eL21|Staphylothermus marinus (strain

Query: 3 HIVTDPAV 10
HIV +PA+
Sbjct: 43 HIVVNPAI 50


>sp|RL21_META3|LARGE ribosomal subunit protein eL21|Methanococcus aeolicus (strain

Query: 3 HIVTDPAV 10
H++ DP+V
Sbjct: 41 HVILDPSV 48


>sp|MTRB_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanosarcina acetivorans (strain

Query: 1 ECHIVTDP 8
E H+V DP
Sbjct: 9 EVHLVMDP 16


>sp|Y1274_METB6|UPF0280 protein Mboo_1274|Methanoregula boonei (strain DSM 21154

Query: 1 ECHIVTDP 8
EC+I DP
Sbjct: 38 ECYIARDP 45


>sp|RS2_METAC|SMALL ribosomal subunit protein uS2|Methanosarcina acetivorans (strain

Query: 4 IVTDPA 9
IVTDPA
Sbjct: 147 IVTDPA 152


>sp|RS2_METBU|SMALL ribosomal subunit protein uS2|Methanococcoides burtonii (strain DSM

Query: 4 IVTDPA 9
IVTDPA
Sbjct: 136 IVTDPA 141


>sp|Y1418_SULTO|UPF0173 metal-dependent hydrolase STK_14180|Sulfurisphaera tokodaii

Query: 3 HIVTDPAV 10
HIV DP +
Sbjct: 20 HIVIDPMI 27


>sp|RS2_METBF|SMALL ribosomal subunit protein uS2|Methanosarcina barkeri (strain Fusaro

Query: 4 IVTDPA 9
IVTDPA
Sbjct: 147 IVTDPA 152


>sp|RS2_METMA|SMALL ribosomal subunit protein uS2|Methanosarcina mazei (strain ATCC

Query: 4 IVTDPA 9
IVTDPA
Sbjct: 146 IVTDPA 151


>sp|RL21_METTP|LARGE ribosomal subunit protein eL21|Methanothrix thermoacetophila

Query: 3 HIVTDPAV 10
HI+ DP++
Sbjct: 41 HIIIDPSI 48


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 1 ECHIVTDP 8
+C VTDP
Sbjct: 714 DCESVTDP 721




37|SequenceR|190|181|KIPEGECHIV

>sp|BRIX_METBU|PROBABLE Brix domain-containing ribosomal biogenesis|Methanococcoides

Query: 2 IPEGECH 8
IPEGEC+
Sbjct: 112 IPEGECY 118


>sp|RADA_METTH|DNA repair and recombination protein|Methanothermobacter

Query: 2 IPEGEC 7
+PEGEC
Sbjct: 295 LPEGEC 300


>sp|Y236_METTH|UNCHARACTERIZED protein MTH_236|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 IPEGECHIV 10
IPEG+C I+
Sbjct: 113 IPEGKCAII 121


>sp|ARCA_HALS3|ARGININE deiminase|Halobacterium salinarum (strain ATCC 29341

Query: 1 KIPEGECH 8
KIPEGE +
Sbjct: 268 KIPEGEAY 275


>sp|G6PI_HALSA|PROBABLE glucose-6-phosphate isomerase|Halobacterium salinarum (strain ATCC

Query: 2 IPEGECHIV 10
+PE E HIV
Sbjct: 417 LPETETHIV 425


>sp|NITR_PYRAB|NITRILASE abyssi (strain GE5 /

Query: 1 KIPEGE 6
KIPEGE
Sbjct: 62 KIPEGE 67


>sp|RADA_METS3|DNA repair and recombination protein|Methanobrevibacter smithii (strain

Query: 2 IPEGEC 7
+PEGEC
Sbjct: 295 LPEGEC 300


>sp|GLCDH_HALMT|GLUCOSE 1-dehydrogenase|Haloferax mediterranei (strain ATCC 33500

Query: 3 PEGECHIV 10
PEGE H+V
Sbjct: 53 PEGEDHLV 60


>sp|GLCD2_HALTV|GLUCOSE 1-dehydrogenase 2|Haloterrigena turkmenica (strain ATCC 51198

Query: 2 IPEGECHIV 10
+P+GE H+V
Sbjct: 53 VPDGEDHLV 61


>sp|RS6E_METS5|SMALL ribosomal subunit protein eS6|Metallosphaera sedula (strain ATCC

Query: 1 KIPEGECH 8
++PEGE H
Sbjct: 86 EVPEGEIH 93


>sp|RS17_THEAC|SMALL ribosomal subunit protein uS17|Thermoplasma acidophilum (strain

Query: 1 KIPEGECH 8
K+PE EC+
Sbjct: 11 KLPESECN 18


>sp|PELO_HALWD|PROTEIN pelota homolog|Haloquadratum walsbyi (strain DSM 16790

Query: 2 IPEGECHI 9
I EGE HI
Sbjct: 142 IEEGEAHI 149


>sp|CSG_HALMA|CELL surface glycoprotein|Haloarcula marismortui (strain ATCC 43049

Query: 3 PEGECHIV 10
PEG H+V
Sbjct: 283 PEGNYHVV 290


>sp|Y1674_SULAC|UNCHARACTERIZED protein Saci_1674|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IPEGECH 8
IP+GE H
Sbjct: 27 IPKGELH 33


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 KIPEGE 6
K+PEGE
Sbjct: 404 KVPEGE 409


>sp|NADA_PYRAE|QUINOLINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 IPEGECHI 9
I +GECH+
Sbjct: 163 IWDGECHV 170


>sp|ACAR_METS5|ACRYLOYL-COENZYME A reductase|Metallosphaera sedula (strain ATCC 51363

Query: 3 PEGECH 8
P+G CH
Sbjct: 89 PDGTCH 94


>sp|DCDB_METS3|DCTP deaminase, dUMP-forming|Methanobrevibacter smithii (strain ATCC

Query: 2 IPEGECHIV 10
+PEGE I+
Sbjct: 70 VPEGEAFII 78


>sp|PELO_HALSA|PROTEIN pelota homolog|Halobacterium salinarum (strain ATCC 700922

Query: 2 IPEGECHI 9
+ EGE HI
Sbjct: 142 VEEGEAHI 149


>sp|PELO_HALS3|PROTEIN pelota homolog|Halobacterium salinarum (strain ATCC 29341

Query: 2 IPEGECHI 9
+ EGE HI
Sbjct: 142 VEEGEAHI 149


>sp|NADA_PYRFU|QUINOLINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PEGECHI 9
PEG C++
Sbjct: 170 PEGHCYV 176


>sp|ACDB1_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 1 KIPEGEC 7
+IP+GEC
Sbjct: 524 EIPKGEC 530


>sp|ACDB2_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 1 KIPEGEC 7
+IP+GEC
Sbjct: 231 EIPKGEC 237


>sp|RUBH_METTH|PUTATIVE rubredoxin|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 KIPEGECHIV 10
+IPEGE +++
Sbjct: 10 QIPEGEFNLL 19


>sp|THII_METS3|PROBABLE tRNA sulfurtransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 KIPEGECHIV 10
K+ +G CH V
Sbjct: 338 KLDDGGCHAV 347


>sp|SYFB_METTH|PHENYLALANINE--TRNA ligase beta subunit|Methanothermobacter thermautotrophicus (strain

Query: 1 KIPEGECHI 9
K P+GE H+
Sbjct: 261 KRPDGELHL 269


>sp|DPCKG_METS3|GTP-DEPENDENT dephospho-CoA kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 EGECHIV 10
+G CH++
Sbjct: 109 DGNCHVI 115




38|SequenceR|195|186|EEDERKIPEG

>sp|MAP2_SACS2|METHIONINE aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 DERKIPEG 10
DE++IPEG
Sbjct: 72 DEKRIPEG 79


>sp|Y1573_ARCFU|UNCHARACTERIZED protein AF_1573|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EEDERKIPE 9
EED R+IPE
Sbjct: 60 EEDFREIPE 68


>sp|UPPP_HALMA|UNDECAPRENYL-DIPHOSPHATASE marismortui (strain ATCC 43049

Query: 4 ERKIPEG 10
ER+IP+G
Sbjct: 146 EREIPDG 152


>sp|KPRS_THEVO|RIBOSE-PHOSPHATE pyrophosphokinase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 DERKIPEG 10
DER+ P+G
Sbjct: 28 DERRFPDG 35


>sp|DPO4_SACS2|DNA polymerase IV|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EEDERKI 7
EEDERKI
Sbjct: 324 EEDERKI 330


>sp|PRIS_THEAC|DNA primase small subunit PriS|Thermoplasma acidophilum (strain ATCC

Query: 3 DERKIPE 9
DERK+PE
Sbjct: 69 DERKMPE 75


>sp|IMDH_HALSA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 1 EEDERKIPEG 10
+EDE +PEG
Sbjct: 417 DEDEEYVPEG 426


>sp|GYAR_PYRAB|GLYOXYLATE reductase|Pyrococcus abyssi (strain GE5 /

Query: 2 EDERKIP 8
EDER+IP
Sbjct: 30 EDEREIP 36


>sp|SYK_CENSY|LYSINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 5 RKIPEG 10
RK+PEG
Sbjct: 82 RKVPEG 87


>sp|SYK_CENSM|LYSINE--TRNA ligase|Cenarchaeum symbiosum

Query: 5 RKIPEG 10
RK+PEG
Sbjct: 81 RKVPEG 86




39|SequenceR|200|191|ENLSEEEDER

>sp|Y1409_METJA|UNCHARACTERIZED protein MJ1409|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ENLSEEEDER 10
EN E++DER
Sbjct: 176 ENFVEKDDER 185




40|SequenceR|205|196|DDYGVENLSE

>sp|NOB1_METJA|ENDORIBONUCLEASE Nob1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DDYGVENLSE 10
DDYG++N+++
Sbjct: 125 DDYGIQNVAK 134


>sp|G3P_PICTO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 1 DDYGVENLS 9
+DYG+ENL+
Sbjct: 153 NDYGIENLN 161


>sp|Y1098_METJA|UNCHARACTERIZED protein MJ1098|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DDYGVENLSE 10
DDY ++N+SE
Sbjct: 44 DDYTLDNISE 53


>sp|NOB1_PYRHO|ENDORIBONUCLEASE Nob1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DDYGVENLS 9
DDY V+N++
Sbjct: 99 DDYNVQNIA 107


>sp|NOB1_PYRAB|ENDORIBONUCLEASE Nob1|Pyrococcus abyssi (strain GE5 /

Query: 1 DDYGVENLS 9
DDY V+N++
Sbjct: 97 DDYNVQNVA 105


>sp|Y551_METJA|UNCHARACTERIZED protein MJ0551|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DDYGVENL 8
++YG+ENL
Sbjct: 259 ENYGIENL 266


>sp|SYR_SULAC|ARGININE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DDYGVEN 7
DDYGVE
Sbjct: 93 DDYGVEK 99


>sp|VAPC1_THEAC|RIBONUCLEASE VapC1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DDYGVENLS 9
DDY ++N++
Sbjct: 126 DDYSIQNVA 134


>sp|SYE_PYRIL|GLUTAMATE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 GVENLSE 10
G+ENL+E
Sbjct: 87 GIENLAE 93


>sp|GATE_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Natronomonas pharaonis (strain ATCC

Query: 1 DDYGVENLS 9
DD VENL+
Sbjct: 501 DDVAVENLT 509


>sp|SYFB_THEVO|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 3 YGVENLSE 10
YG+EN+ E
Sbjct: 336 YGIENVRE 343


>sp|TOP6A_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 3 YGVENLSE 10
YG+EN++E
Sbjct: 301 YGLENVTE 308


>sp|NOB1_ARCFU|ENDORIBONUCLEASE Nob1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DDYGVENLS 9
DDY ++N++
Sbjct: 100 DDYAIQNVA 108


>sp|RFRNP_METBF|RNA-FREE ribonuclease P|Methanosarcina barkeri (strain Fusaro /

Query: 2 DYGVENLSE 10
DYG+E +E
Sbjct: 192 DYGIEKWAE 200


>sp|RFRNP_METAC|RNA-FREE ribonuclease P|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DYGVENLSE 10
DYG+E +E
Sbjct: 192 DYGIEKWAE 200


>sp|SYR_SULTO|ARGININE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DDYGVENLSE 10
+DYG+E + +
Sbjct: 96 EDYGIEKIQK 105


>sp|URE1_SULTO|UREASE subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GVENLSE 10
GVENLS+
Sbjct: 489 GVENLSK 495


>sp|Y866_ARCFU|UNCHARACTERIZED sugar kinase AF_0866|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DDYGVE 6
D+YGVE
Sbjct: 60 DEYGVE 65




41|SequenceR|210|201|RCGGIDDYGV

>sp|COFG_METVS|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 GGIDDYG 9
GGIDD+G
Sbjct: 287 GGIDDFG 293


>sp|SEPS_METBU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 GGIDDYGV 10
GGIDD G+
Sbjct: 120 GGIDDEGI 127


>sp|PSB_METB6|PROTEASOME subunit beta|Methanoregula boonei (strain DSM 21154

Query: 3 GGIDDYG 9
GGIDD+G
Sbjct: 113 GGIDDHG 119


>sp|THIM_HALWD|HYDROXYETHYLTHIAZOLE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 CGGIDD 7
CGG+DD
Sbjct: 217 CGGLDD 222


>sp|UVRB_NATPD|UVRABC system protein B|Natronomonas pharaonis (strain ATCC 35678

Query: 2 CGGIDDYGV 10
C GI++Y V
Sbjct: 315 CSGIENYSV 323


>sp|UVRB_HALMA|UVRABC system protein B|Haloarcula marismortui (strain ATCC 43049

Query: 2 CGGIDDYGV 10
C GI++Y V
Sbjct: 316 CSGIENYSV 324


>sp|PURL_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GGIDDYG 9
GGI DYG
Sbjct: 171 GGIRDYG 177


>sp|KTHY_METTH|PROBABLE thymidylate kinase|Methanothermobacter thermautotrophicus (strain

Query: 1 RCGGIDDY 8
RCGG D++
Sbjct: 133 RCGGTDEF 140


>sp|UVRB_HALSA|UVRABC system protein B|Halobacterium salinarum (strain ATCC 700922

Query: 2 CGGIDDYGV 10
C GI++Y V
Sbjct: 316 CSGIENYSV 324


>sp|PSB2_PYRCJ|PROTEASOME subunit beta 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 GGIDDYG 9
GGIDD G
Sbjct: 110 GGIDDEG 116


>sp|HPRL2_HALWD|HGPRTASE-LIKE protein 2|Haloquadratum walsbyi (strain DSM 16790

Query: 2 CGGIDDYG 9
CG +DD G
Sbjct: 133 CGALDDIG 140


>sp|HPRL2_HALWC|HGPRTASE-LIKE protein 2|Haloquadratum walsbyi (strain DSM 16854

Query: 2 CGGIDDYG 9
CG +DD G
Sbjct: 133 CGALDDIG 140


>sp|COFG_METMP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GGIDDYG 9
GIDD+G
Sbjct: 265 AGIDDWG 271


>sp|COFG_METM7|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C7 /

Query: 3 GGIDDYG 9
GIDD+G
Sbjct: 287 AGIDDWG 293


>sp|COFG_METM6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C6 /

Query: 3 GGIDDYG 9
GIDD+G
Sbjct: 287 AGIDDWG 293


>sp|COFG_METM5|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C5 /

Query: 3 GGIDDYG 9
GIDD+G
Sbjct: 287 AGIDDWG 293


>sp|PSB_METRM|PROTEASOME subunit beta|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 3 GGIDDYG 9
GG+DD G
Sbjct: 108 GGVDDTG 114


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 GGIDDYGV 10
GG D++GV
Sbjct: 46 GGTDNHGV 53


>sp|SYM_METMP|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GGIDDYGV 10
GG D++GV
Sbjct: 46 GGTDNHGV 53


>sp|SYM_METM7|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 GGIDDYGV 10
GG D++GV
Sbjct: 46 GGTDNHGV 53


>sp|SYM_METM5|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 GGIDDYGV 10
GG D++GV
Sbjct: 46 GGTDNHGV 53


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 GGIDDYGV 10
GG D++GV
Sbjct: 47 GGTDNHGV 54


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GGIDDYGV 10
GG D++GV
Sbjct: 46 GGTDNHGV 53


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GGIDDYGV 10
GG D++GV
Sbjct: 48 GGTDNHGV 55


>sp|MEND_NATPD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 CGGIDDY 8
CGG D Y
Sbjct: 290 CGGYDAY 296


>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain DSM

Query: 3 GGIDDYGV 10
GG DYGV
Sbjct: 133 GGDGDYGV 140


>sp|ADEC_METB6|ADENINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 1 RCGGIDD 7
R GGIDD
Sbjct: 516 RIGGIDD 522


>sp|HPRL2_HALVD|HGPRTASE-LIKE protein 2|Haloferax volcanii (strain ATCC 29605

Query: 2 CGGIDDYG 9
CG +DD G
Sbjct: 133 CGALDDIG 140


>sp|MEND_HALMA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 CGGIDDY 8
CGG D Y
Sbjct: 287 CGGYDGY 293


>sp|GCSPA_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 3 GGIDDYGV 10
GG+D+Y V
Sbjct: 36 GGLDEYRV 43


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GGIDDYGV 10
GG+D+Y V
Sbjct: 217 GGVDEYLV 224


>sp|ACEB_HALVD|MALATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 3 GGIDDY 8
GGIDD+
Sbjct: 125 GGIDDW 130


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RCGGIDDYGV 10
+ GGI+ YG+
Sbjct: 2574 KVGGIEVYGL 2583


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 GIDDYGV 10
GI++YGV
Sbjct: 1030 GIENYGV 1036


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 CGGIDDYG 9
GGI DYG
Sbjct: 170 VGGIRDYG 177


>sp|THI4_METMA|THIAMINE thiazole synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CGGIDDYGV 10
C +DD+G+
Sbjct: 81 CRVLDDFGI 89


>sp|CFBD_METTH|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanothermobacter

Query: 3 GGIDDYGV 10
GG+D+Y +
Sbjct: 263 GGLDEYPI 270




42|SequenceR|215|206|QALQKRCGGI

>sp|RS8_IGNH4|SMALL ribosomal subunit protein uS8|Ignicoccus hospitalis (strain KIN4/I

Query: 1 QALQKRCGGI 10
+A+QKR GGI
Sbjct: 118 EAIQKRVGGI 127


>sp|RS8_HYPBU|SMALL ribosomal subunit protein uS8|Hyperthermus butylicus (strain DSM

Query: 1 QALQKRCGGI 10
+A+Q+R GG+
Sbjct: 118 EAIQRRIGGV 127


>sp|Y1223_PYRHO|UNCHARACTERIZED ZPR1-like protein PH1223|Pyrococcus horikoshii (strain ATCC

Query: 3 LQKRCGGI 10
++KRCGG+
Sbjct: 7 IRKRCGGV 14


>sp|COBQ_THEKO|PROBABLE cobyric acid synthase|Thermococcus kodakarensis (strain ATCC

Query: 3 LQKRCG 8
L+KRCG
Sbjct: 213 LEKRCG 218


>sp|PURL_PYRCJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 QALQKRCGG 9
+ L+ RCGG
Sbjct: 666 EKLRLRCGG 674


>sp|AROC_METAR|CHORISMATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 6 RCGGI 10
RCGGI
Sbjct: 279 RCGGI 283




43|SequenceR|220|211|VMEKIQALQK

>sp|CAS8A_METJA|CRISPR-ASSOCIATED protein Cas8a2/Csa4|Methanocaldococcus jannaschii (strain ATCC

Query: 3 EKIQALQK 10
EK+Q+LQK
Sbjct: 11 EKLQSLQK 18


>sp|AATA_METTH|A-TYPE ATP synthase subunit A|Methanothermobacter thermautotrophicus

Query: 3 EKIQALQK 10
EKIQ LQK
Sbjct: 184 EKIQMLQK 191


>sp|TYW31_THEKO|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 VMEKIQALQ 9
++EKI ALQ
Sbjct: 35 LLEKINALQ 43


>sp|AATA_METS3|A-TYPE ATP synthase subunit A|Methanobrevibacter smithii (strain ATCC

Query: 3 EKIQALQK 10
EKIQ LQK
Sbjct: 184 EKIQMLQK 191


>sp|SRP54_THEGJ|SIGNAL recognition particle 54 kDa|Thermococcus gammatolerans (strain DSM

Query: 1 VMEKIQALQK 10
++EKI+ LQK
Sbjct: 302 LLEKIEELQK 311


>sp|SRP54_THEKO|SIGNAL recognition particle 54 kDa|Thermococcus kodakarensis (strain ATCC

Query: 1 VMEKIQALQK 10
++EKI+ LQK
Sbjct: 302 LLEKIEELQK 311


>sp|RL7A_ARCFU|LARGE ribosomal subunit protein eL8|Archaeoglobus fulgidus (strain ATCC

Query: 1 VMEKIQALQK 10
++EKI+ LQK
Sbjct: 110 LVEKIKGLQK 119




44|SequenceR|225|216|RLPLEVMEKI

>sp|GUAA_PYRAE|GMP synthase [glutamine-hydrolyzing]|Pyrobaculum aerophilum (strain

Query: 1 RLPLEVMEKI 10
R+P E++EKI
Sbjct: 467 RIPFEILEKI 476


>sp|ARGC_METPE|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 RLPLEVMEKI 10
RLP E+ EK+
Sbjct: 100 RLPQEIFEKV 109


>sp|GUAAB_SACI7|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 RLPLEVMEKI 10
R+P EV+EKI
Sbjct: 329 RIPKEVLEKI 338


>sp|GUAAB_SACI6|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 RLPLEVMEKI 10
R+P EV+EKI
Sbjct: 329 RIPKEVLEKI 338


>sp|GUAAB_SACI4|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 RLPLEVMEKI 10
R+P EV+EKI
Sbjct: 329 RIPKEVLEKI 338


>sp|GUAAB_SACI3|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 RLPLEVMEKI 10
R+P EV+EKI
Sbjct: 329 RIPKEVLEKI 338


>sp|GUAAB_SACI2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 RLPLEVMEKI 10
R+P EV+EKI
Sbjct: 329 RIPKEVLEKI 338


>sp|GUAAB_SACI1|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 RLPLEVMEKI 10
R+P EV+EKI
Sbjct: 329 RIPKEVLEKI 338


>sp|ARGC_METMJ|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 RLPLEVMEKI 10
RLP +V EKI
Sbjct: 100 RLPKDVYEKI 109


>sp|SYDND_ARCFU|ASPARTATE--TRNA(ASP/ASN) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LPLEVMEKI 10
LPLEV EK+
Sbjct: 103 LPLEVTEKV 111


>sp|NQOR_METBF|NAD(P)H dehydrogenase (quinone)|Methanosarcina barkeri (strain Fusaro /

Query: 2 LPLEVMEKI 10
LP EV+EK+
Sbjct: 43 LPYEVLEKM 51


>sp|SERB_ARCFU|PHOSPHOSERINE phosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LPLEVMEKI 10
LP+EV+E+I
Sbjct: 187 LPVEVLERI 195


>sp|Y282_ARCFU|UPF0212 protein AF_0282|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RLPLEVME 8
R+PLEV+E
Sbjct: 101 RIPLEVIE 108


>sp|SYDND_METHJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LPLEVMEKI 10
LPL+V EK+
Sbjct: 101 LPLDVAEKV 109


>sp|LMRAC_THEKO|LEUCINE/METHIONINE racemase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RLPLEVMEKI 10
R+P EV+EK+
Sbjct: 431 RVPDEVIEKV 440


>sp|SYDND_METMJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LPLEVMEKI 10
LPL+V EK+
Sbjct: 101 LPLDVAEKV 109


>sp|SYDND_METLZ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LPLEVMEKI 10
LPL+V EK+
Sbjct: 101 LPLDVSEKV 109


>sp|NQOR_METAC|NAD(P)H dehydrogenase (quinone)|Methanosarcina acetivorans (strain ATCC

Query: 2 LPLEVMEKI 10
LP EV+EK+
Sbjct: 43 LPEEVLEKM 51


>sp|Y1054_METJA|UNCHARACTERIZED protein MJ1054|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PLEVMEKI 10
P+E+ME++
Sbjct: 175 PIEIMEEV 182


>sp|NFI_NANEQ|BIFUNCTIONAL methyltransferase-like/endonuclease|Nanoarchaeum equitans (strain

Query: 2 LPLEVMEKI 10
LP+EV +KI
Sbjct: 278 LPIEVADKI 286


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RLPLEVMEKI 10
R P+E+ EKI
Sbjct: 55 RPPIEIAEKI 64


>sp|Y3058_HALWD|PUTATIVE HTH-type transcriptional regulatory protein|Haloquadratum walsbyi

Query: 3 PLEVME 8
PLEVME
Sbjct: 185 PLEVME 190


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 RLPLEVMEK 9
R+PLE+ K
Sbjct: 925 RIPLEIYHK 933




45|SequenceR|230|221|FLAPHRLPLE

>sp|FBPAP_THEON|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus onnurineus (strain NA1)

Query: 4 PHRLPLE 10
PHRLPLE
Sbjct: 347 PHRLPLE 353


>sp|FBPAP_THEKO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 PHRLPLE 10
PHRLPLE
Sbjct: 347 PHRLPLE 353


>sp|RRP42_AERPE|EXOSOME complex component Rrp42|Aeropyrum pernix (strain ATCC 700893

Query: 2 LAPHRLPL 9
+ PHRLP+
Sbjct: 3 ITPHRLPV 10


>sp|CFBD_METJA|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanocaldococcus

Query: 4 PHRLPLE 10
PH LP+E
Sbjct: 288 PHALPIE 294


>sp|TRUA_PYRCJ|TRNA pseudouridine synthase A|Pyrobaculum calidifontis (strain DSM

Query: 2 LAPHRLPL 9
LAP RLPL
Sbjct: 54 LAPSRLPL 61


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 1 FLAPHRLPLE 10
FLA H +P E
Sbjct: 954 FLADHGIPTE 963


>sp|AMPA_AERPE|PROBABLE cytosol aminopeptidase|Aeropyrum pernix (strain ATCC 700893

Query: 4 PHRLP 8
PHRLP
Sbjct: 177 PHRLP 181


>sp|FBPAP_METJA|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 PHRLP 8
PHRLP
Sbjct: 342 PHRLP 346


>sp|FBPAP_METTM|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanothermobacter marburgensis (strain ATCC

Query: 4 PHRLP 8
PHRLP
Sbjct: 337 PHRLP 341


>sp|FBPAP_PYRNV|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 PHRLPLE 10
PHRLP E
Sbjct: 348 PHRLPPE 354


>sp|CARB2_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 3 APHRLPLE 10
A H LPLE
Sbjct: 386 AGHELPLE 393


>sp|CFBD_METBF|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina barkeri

Query: 4 PHRLPLE 10
PH +P+E
Sbjct: 304 PHAIPME 310


>sp|CFBD_METAC|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina acetivorans

Query: 4 PHRLPLE 10
PH +P+E
Sbjct: 304 PHAIPME 310




46|SequenceR|235|226|VGIAKFLAPH

>sp|ATGT_THEAC|TRNA-GUANINE(15) transglycosylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 IAKFLAPH 10
IAKF PH
Sbjct: 12 IAKFETPH 19


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 2 GIAKFLAPH 10
G +KFLA H
Sbjct: 950 GTSKFLADH 958


>sp|TAL_METM5|PROBABLE transaldolase|Methanococcus maripaludis (strain C5 /

Query: 2 GIAKFLA 8
GIAKFLA
Sbjct: 201 GIAKFLA 207


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 AKFLAPH 10
+KF++PH
Sbjct: 283 SKFMSPH 289


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 GIAKFLA 8
GIAK+LA
Sbjct: 671 GIAKYLA 677


>sp|KDPA_HALSA|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 1 VGIAKFLAP 9
+GIA FL P
Sbjct: 150 IGIAMFLTP 158


>sp|KDPA_HALS3|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 1 VGIAKFLAP 9
+GIA FL P
Sbjct: 150 IGIAMFLTP 158


>sp|TAL_METVS|PROBABLE transaldolase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VGIAKFLA 8
+GI KFLA
Sbjct: 200 IGIEKFLA 207


>sp|TAL_METM6|PROBABLE transaldolase|Methanococcus maripaludis (strain C6 /

Query: 1 VGIAKFLA 8
+GI KFLA
Sbjct: 200 IGIEKFLA 207


>sp|TAL_METMP|PROBABLE transaldolase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GIAKFLA 8
GIAKFL+
Sbjct: 201 GIAKFLS 207




47|SequenceR|240|231|GRPPKVGIAK

>sp|TOP6A_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 1 GRPPKVGIAK 10
GRPPK+ I K
Sbjct: 36 GRPPKLEIPK 45


>sp|DNAG_HYPBU|DNA primase DnaG|Hyperthermus butylicus (strain DSM 5456

Query: 2 RPPKVGI 8
RPPKVGI
Sbjct: 413 RPPKVGI 419


>sp|PURQ_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Thermoplasma acidophilum (strain ATCC

Query: 2 RPPKVGI 8
+PPKVGI
Sbjct: 2 KPPKVGI 8


>sp|Y191_METTH|PUTATIVE glutamine amidotransferase MTH_191|Methanothermobacter

Query: 1 GRPPKVGIAK 10
G P VGIAK
Sbjct: 248 GTPQGVGIAK 257


>sp|DTDA_SULTO|D-AMINOACYL-TRNA deacylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GRPPKVGIA 9
G P K+GIA
Sbjct: 72 GEPKKLGIA 80


>sp|DTDA_SACS2|D-AMINOACYL-TRNA deacylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GRPPKVGIA 9
G P K+GIA
Sbjct: 72 GEPKKLGIA 80


>sp|DTDA_SACI7|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GRPPKVGIA 9
G P K+GIA
Sbjct: 72 GEPKKLGIA 80


>sp|DTDA_SACI6|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GRPPKVGIA 9
G P K+GIA
Sbjct: 72 GEPKKLGIA 80


>sp|DTDA_SACI4|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GRPPKVGIA 9
G P K+GIA
Sbjct: 72 GEPKKLGIA 80


>sp|DTDA_SACI3|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 GRPPKVGIA 9
G P K+GIA
Sbjct: 72 GEPKKLGIA 80


>sp|DTDA_SACI2|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GRPPKVGIA 9
G P K+GIA
Sbjct: 72 GEPKKLGIA 80


>sp|DTDA_SACI1|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GRPPKVGIA 9
G P K+GIA
Sbjct: 72 GEPKKLGIA 80


>sp|NURA_SACS2|DNA double-strand break repair nuclease|Saccharolobus solfataricus

Query: 1 GRPPKVGI 8
GRP ++GI
Sbjct: 63 GRPMRIGI 70


>sp|DHE_HALSI|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (Halobacterium halobium)

Query: 1 GRPPKVG 7
G+PP++G
Sbjct: 174 GKPPEIG 180


>sp|DHE_HALSA|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (strain ATCC 700922

Query: 1 GRPPKVG 7
G+PP++G
Sbjct: 174 GKPPEIG 180


>sp|DTDA_DESA1|D-AMINOACYL-TRNA deacylase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 GRPPKVGIA 9
GRP ++GIA
Sbjct: 99 GRPGELGIA 107


>sp|DPCKG_METHJ|GTP-DEPENDENT dephospho-CoA kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GRPPKVGI 8
GRPP+V I
Sbjct: 50 GRPPEVAI 57


>sp|RPO1C_AERPE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Aeropyrum pernix (strain ATCC 700893

Query: 1 GRPPKVG 7
G PP+VG
Sbjct: 388 GLPPRVG 394


>sp|Y206_METKA|UPF0280 protein MK0206|Methanopyrus kandleri (strain AV19 /

Query: 1 GRPPKV 6
GRPPK+
Sbjct: 219 GRPPKI 224


>sp|DHE3_THELN|GLUTAMATE dehydrogenase|Thermococcus litoralis (strain ATCC 51850

Query: 1 GRPPKVG 7
G+PP VG
Sbjct: 176 GKPPSVG 182


>sp|DTDA_SULAC|D-AMINOACYL-TRNA deacylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GRPPKVGIA 9
G P K+G+A
Sbjct: 72 GEPEKLGVA 80




48|SequenceR|245|236|GYLLIGRPPK

>sp|GYRB_ARCFU|DNA gyrase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GYLLIGRPP 9
GYL I +PP
Sbjct: 525 GYLYIAQPP 533


>sp|SYR_SULTO|ARGININE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GYLLIGRP 8
GYLL+G P
Sbjct: 166 GYLLLGEP 173


>sp|RNP1_METMP|RIBONUCLEASE P protein component 1|Methanococcus maripaludis (strain DSM 14266

Query: 1 GYLLIGRP 8
G LL+GRP
Sbjct: 75 GRLLVGRP 82


>sp|DNAK_HALSA|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 700922

Query: 1 GYLLIGRPPK 10
G LL+G+P K
Sbjct: 47 GELLVGKPAK 56


>sp|DNAK_HALS3|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 29341

Query: 1 GYLLIGRPPK 10
G LL+G+P K
Sbjct: 47 GELLVGKPAK 56


>sp|RPO1C_THEON|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus onnurineus (strain NA1)

Query: 1 GYLLIGRPPK 10
GY LI RP K
Sbjct: 195 GYTLIMRPKK 204


>sp|RPO1C_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus horikoshii (strain ATCC

Query: 1 GYLLIGRPPK 10
GY LI RP K
Sbjct: 197 GYTLIVRPKK 206


>sp|RPO1C_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus abyssi (strain GE5 /

Query: 1 GYLLIGRPPK 10
GY LI RP K
Sbjct: 197 GYTLIVRPKK 206


>sp|RPO1C_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GYLLIGRPPK 10
GY LI RP K
Sbjct: 197 GYTLIVRPKK 206


>sp|RNP1_METVS|RIBONUCLEASE P protein component 1|Methanococcus vannielii (strain ATCC 35089

Query: 1 GYLLIGRPP 9
G LLIGRP
Sbjct: 78 GRLLIGRPE 86


>sp|RNP1_METVA|RIBONUCLEASE P protein component 1|Methanococcus vannielii

Query: 1 GYLLIGRPP 9
G LLIGRP
Sbjct: 78 GRLLIGRPE 86


>sp|SYR_SULAC|ARGININE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GYLLIGRP 8
GY+L+G P
Sbjct: 163 GYILLGEP 170


>sp|RNP1_METJA|RIBONUCLEASE P protein component 1|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GYLLIGRPPK 10
G LLIGRP +
Sbjct: 74 GRLLIGRPEE 83


>sp|RPO1C_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus kodakarensis (strain ATCC

Query: 1 GYLLIGRPPK 10
GY L+ RP K
Sbjct: 195 GYTLVVRPKK 204


>sp|RPO1C_THEGJ|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus gammatolerans (strain DSM

Query: 1 GYLLIGRPPK 10
GY LI RP K
Sbjct: 195 GYSLIVRPKK 204


>sp|RNP1_METKA|RIBONUCLEASE P protein component 1|Methanopyrus kandleri (strain AV19 /

Query: 1 GYLLIGRPPK 10
G LL+GRP +
Sbjct: 75 GALLVGRPEE 84


>sp|PURP2_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 2|Methanosarcina mazei (strain ATCC

Query: 3 LLIGRPPK 10
+ +G+PPK
Sbjct: 46 ICVGKPPK 53


>sp|RPO1C_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus celer

Query: 1 GYLLIGRPPK 10
GY +I RP K
Sbjct: 195 GYTVIMRPKK 204


>sp|Y2131_ARCFU|UNCHARACTERIZED protein AF_2131|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GYLLIGRP 8
GY++IG P
Sbjct: 93 GYIIIGFP 100


>sp|DPCKG_THEPD|GTP-DEPENDENT dephospho-CoA kinase|Thermofilum pendens (strain DSM 2475

Query: 1 GYLLIGRPP 9
GYL PP
Sbjct: 16 GYLFFDEPP 24


>sp|PURP_METAC|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina acetivorans (strain

Query: 3 LLIGRPPK 10
+ +G+PPK
Sbjct: 46 ICVGKPPK 53


>sp|PURP1_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 1|Methanosarcina mazei (strain ATCC

Query: 3 LLIGRPPK 10
+ +G+PPK
Sbjct: 46 ICVGKPPK 53


>sp|PURP_METBF|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina barkeri (strain Fusaro

Query: 3 LLIGRPPK 10
+ +G+PPK
Sbjct: 46 ICVGKPPK 53


>sp|DNAK_PICTO|CHAPERONE protein DnaK|Picrophilus torridus (strain ATCC 700027

Query: 1 GYLLIGRPPK 10
G LL+G P +
Sbjct: 50 GQLLVGEPAR 59


>sp|RTCB_NANEQ|TRNA-SPLICING ligase RtcB|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GYLLIGRP 8
YLL+G+P
Sbjct: 381 SYLLVGQP 388


>sp|RNP1_META3|RIBONUCLEASE P protein component 1|Methanococcus aeolicus (strain ATCC

Query: 1 GYLLIGRPP 9
G LL+GRP
Sbjct: 75 GELLMGRPE 83


>sp|Y579_METJA|UNCHARACTERIZED protein MJ0579|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GYLLIGR 7
GYL++G+
Sbjct: 130 GYLIVGK 136


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain ATCC

Query: 2 YLLIGRPP 9
YLLI PP
Sbjct: 151 YLLIDTPP 158




49|SequenceR|250|241|GTGPPGYLLI

>sp|CSG_METVS|S-LAYER protein|Methanococcus vannielii (strain ATCC 35089

Query: 1 GTGPPGYLL 9
GTG P YLL
Sbjct: 133 GTGVPNYLL 141


>sp|RS6E_SULAC|SMALL ribosomal subunit protein eS6|Sulfolobus acidocaldarius (strain

Query: 2 TGPPGY 7
+GPPGY
Sbjct: 177 SGPPGY 182


>sp|Y213_METKA|UPF0282 protein MK0213|Methanopyrus kandleri (strain AV19 /

Query: 2 TGPPGYLL 9
+GPP YLL
Sbjct: 209 SGPPTYLL 216


>sp|HEM1_METMA|GLUTAMYL-TRNA reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GTGPPGYLL 9
GTG P Y+L
Sbjct: 240 GTGAPHYIL 248


>sp|HEM1_METBF|GLUTAMYL-TRNA reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GTGPPGYLL 9
GTG P Y+L
Sbjct: 239 GTGAPHYIL 247


>sp|HEM1_METAC|GLUTAMYL-TRNA reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GTGPPGYLL 9
GTG P Y+L
Sbjct: 240 GTGAPHYIL 248


>sp|DNLI1_METAC|DNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GTGPPGYLLI 10
G G PGY I
Sbjct: 205 GAGAPGYFSI 214


>sp|Y1629_METJA|UPF0282 protein MJ1629|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GPPGYLL 9
GPP YL+
Sbjct: 208 GPPTYLM 214


>sp|PSTK_METKA|L-SERYL-TRNA(SEC) kinase|Methanopyrus kandleri (strain AV19 /

Query: 2 TGPPG 6
TGPPG
Sbjct: 7 TGPPG 11


>sp|KAD6_THEVO|PUTATIVE adenylate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 TGPPG 6
TGPPG
Sbjct: 8 TGPPG 12


>sp|Y249_PYRAB|PUTATIVE GTPase PYRAB02490|Pyrococcus abyssi (strain GE5 /

Query: 2 TGPPG 6
TGPPG
Sbjct: 51 TGPPG 55


>sp|RS6E_SACS2|SMALL ribosomal subunit protein eS6|Saccharolobus solfataricus (strain

Query: 2 TGPPGY 7
+GPPG+
Sbjct: 178 SGPPGF 183


>sp|RS6E_SACI7|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 2 TGPPGY 7
+GPPG+
Sbjct: 178 SGPPGF 183


>sp|RS6E_SACI6|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 2 TGPPGY 7
+GPPG+
Sbjct: 178 SGPPGF 183


>sp|RS6E_SACI4|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 2 TGPPGY 7
+GPPG+
Sbjct: 178 SGPPGF 183


>sp|RS6E_SACI3|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 2 TGPPGY 7
+GPPG+
Sbjct: 178 SGPPGF 183


>sp|RS6E_SACI2|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 2 TGPPGY 7
+GPPG+
Sbjct: 178 SGPPGF 183


>sp|NTPTH_CALMQ|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 TGPPG 6
TGPPG
Sbjct: 8 TGPPG 12


>sp|Y130_ARCFU|PROBABLE deacetylase AF_0130|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GTGPPGYLLI 10
GTG GY+++
Sbjct: 216 GTGDEGYMMV 225


>sp|RS6E_METS5|SMALL ribosomal subunit protein eS6|Metallosphaera sedula (strain ATCC

Query: 3 GPPGYL 8
GPPG++
Sbjct: 177 GPPGFI 182


>sp|Y274_PYRHO|PUTATIVE GTPase PH0274|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TGPPG 6
TGPPG
Sbjct: 53 TGPPG 57


>sp|NTPTH_IGNH4|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 TGPPG 6
TGPPG
Sbjct: 7 TGPPG 11


>sp|BGAL_SACS2|BETA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 4 PPGYL 8
PPGYL
Sbjct: 223 PPGYL 227


>sp|RS6E_SULTO|SMALL ribosomal subunit protein eS6|Sulfurisphaera tokodaii (strain DSM

Query: 2 TGPPGY 7
+GPPG+
Sbjct: 177 SGPPGF 182


>sp|BGAL_SACSH|BETA-GALACTOSIDASE shibatae (strain ATCC 51178

Query: 4 PPGYL 8
PPGYL
Sbjct: 223 PPGYL 227


>sp|RS6E_STAMF|SMALL ribosomal subunit protein eS6|Staphylothermus marinus (strain ATCC

Query: 2 TGPPGY 7
+GPPG+
Sbjct: 179 SGPPGF 184


>sp|NTPTH_AERPE|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Aeropyrum pernix (strain ATCC 700893

Query: 2 TGPPG 6
TGPPG
Sbjct: 23 TGPPG 27


>sp|TRUA_HALSA|TRNA pseudouridine synthase A|Halobacterium salinarum (strain ATCC

Query: 1 GTGPPGY 7
G PPGY
Sbjct: 43 GAKPPGY 49


>sp|TRUA_HALS3|TRNA pseudouridine synthase A|Halobacterium salinarum (strain ATCC

Query: 1 GTGPPGY 7
G PPGY
Sbjct: 43 GAKPPGY 49


>sp|FAU1_PYRIL|PROBABLE ribonuclease FAU-1|Pyrobaculum islandicum (strain DSM 4184

Query: 3 GPPGYLL 9
GPPG LL
Sbjct: 222 GPPGTLL 228


>sp|Y36K_HALSN|UNCHARACTERIZED 36 kDa protein|Halobacterium sp. (strain GN101)

Query: 1 GTGPPGY 7
G GP GY
Sbjct: 156 GNGPAGY 162


>sp|GLCD2_SACS2|GLUCOSE 1-dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GTGPPGYLL 9
GTGP G L
Sbjct: 190 GTGPTGILF 198


>sp|DLDH3_HALMA|DIHYDROLIPOYL dehydrogenase 3|Haloarcula marismortui (strain ATCC 43049

Query: 1 GTGPPGYL 8
G GP GY+
Sbjct: 16 GAGPGGYV 23


>sp|DLDH_HALVD|DIHYDROLIPOYL dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 1 GTGPPGYL 8
G GP GY+
Sbjct: 16 GAGPGGYV 23


>sp|COFE_METKA|COENZYME F420:L-glutamate ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 GPPGYLLI 10
PPGY+++
Sbjct: 118 APPGYVIV 125


>sp|METK_SULTO|S-ADENOSYLMETHIONINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GTGPPGYL 8
GTG P Y+
Sbjct: 26 GTGHPDYI 33


>sp|RS6E_HYPBU|SMALL ribosomal subunit protein eS6|Hyperthermus butylicus (strain DSM

Query: 2 TGPPGY 7
+GPPG+
Sbjct: 177 SGPPGF 182




50|SequenceR|255|246|AILTKGTGPP

>sp|PDAD2_METAC|PYRUVOYL-DEPENDENT arginine decarboxylase 2|Methanosarcina acetivorans (strain ATCC

Query: 1 AILTKGTG 8
A LTKGTG
Sbjct: 6 AFLTKGTG 13


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 ILTKGTGP 9
++TKG+GP
Sbjct: 735 VVTKGSGP 742


>sp|PDAD2_METMA|PYRUVOYL-DEPENDENT arginine decarboxylase 2|Methanosarcina mazei (strain ATCC

Query: 1 AILTKGTG 8
A LTKGTG
Sbjct: 6 AFLTKGTG 13


>sp|ASOR_PYRFU|ALIPHATIC sulfonate oxidoreductase, WOR-like subunit|Pyrococcus furiosus

Query: 1 AILTKGTGP 9
A++ KG+GP
Sbjct: 213 AVIAKGSGP 221


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 ILTKGTGPP 10
++T GT PP
Sbjct: 107 LVTSGTTPP 115


>sp|GUAAB_METAC|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina

Query: 1 AILTKGTG 8
A+L KGTG
Sbjct: 231 AVLGKGTG 238


>sp|GUAAB_METMA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina mazei

Query: 1 AILTKGTG 8
A+L KGTG
Sbjct: 231 AVLGKGTG 238




51|SequenceR|260|251|NAVARAILTK

>sp|DTDA_METAC|D-AMINOACYL-TRNA deacylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 VARAILT 9
VARAILT
Sbjct: 190 VARAILT 196




52|SequenceR|265|256|FAGTENAVAR

***** No hits found ******


53|SequenceR|270|261|NILFFFAGTE

>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 3 LFFFAGT 9
F+FAGT
Sbjct: 170 FFYFAGT 176


>sp|RACD_THEK8|ASPARTATE racemase|Thermococcus sp. (strain KS-8)

Query: 1 NILFFFAGT 9
N FFAGT
Sbjct: 85 NTAHFFAGT 93


>sp|Y1626_METJA|UNCHARACTERIZED protein MJ1626|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NILFFF 6
NI+FFF
Sbjct: 62 NIIFFF 67




54|SequenceR|275|266|MIEPGNILFF

>sp|RL10E_PYRAR|LARGE ribosomal subunit protein uL16|Pyrobaculum arsenaticum (strain DSM

Query: 2 IEPGNILFF 10
+EPG ILF+
Sbjct: 130 VEPGQILFY 138


>sp|RL10E_PYRAE|LARGE ribosomal subunit protein uL16|Pyrobaculum aerophilum (strain ATCC

Query: 2 IEPGNILFF 10
+EPG +LF+
Sbjct: 130 VEPGQVLFY 138


>sp|PUR5_METBU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 IEPGNILFF 10
IEPGNI F
Sbjct: 266 IEPGNIFKF 274


>sp|RL10E_PYRIL|LARGE ribosomal subunit protein uL16|Pyrobaculum islandicum (strain DSM

Query: 2 IEPGNILFF 10
+EPG ++F+
Sbjct: 130 VEPGQVIFY 138


>sp|RL10E_PYRCJ|LARGE ribosomal subunit protein uL16|Pyrobaculum calidifontis (strain DSM

Query: 2 IEPGNILFF 10
+EPG ++F+
Sbjct: 130 VEPGQVIFY 138


>sp|PDAD_NITMS|PYRUVOYL-DEPENDENT arginine decarboxylase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 IEPGNILF 9
I+PG ILF
Sbjct: 62 IKPGQILF 69


>sp|RL2_METJA|LARGE ribosomal subunit protein uL2|Methanocaldococcus jannaschii

Query: 2 IEPGNIL 8
I+PGNIL
Sbjct: 92 IKPGNIL 98


>sp|RL2_METST|LARGE ribosomal subunit protein uL2|Methanosphaera stadtmanae (strain

Query: 2 IEPGNIL 8
IEPGN L
Sbjct: 92 IEPGNTL 98


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 IEPGNILF 9
IEP NI+F
Sbjct: 179 IEPENIVF 186


>sp|RL2_CALMQ|LARGE ribosomal subunit protein uL2|Caldivirga maquilingensis (strain

Query: 2 IEPGNIL 8
+EPGN++
Sbjct: 92 VEPGNVM 98


>sp|ILVC_METST|KETOL-ACID reductoisomerase (NADP(+))|Methanosphaera stadtmanae (strain ATCC

Query: 2 IEPGNILFF 10
+EPGN + F
Sbjct: 97 VEPGNTISF 105


>sp|PDAD_PICTO|PYRUVOYL-DEPENDENT arginine decarboxylase|Picrophilus torridus (strain ATCC 700027

Query: 1 MIEPGNILF 9
++ PG ILF
Sbjct: 61 LLNPGQILF 69


>sp|Y1626_METJA|UNCHARACTERIZED protein MJ1626|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MIEPGNILFF 10
+I P NI+FF
Sbjct: 57 IISPENIIFF 66


>sp|RL2_METVS|LARGE ribosomal subunit protein uL2|Methanococcus vannielii (strain

Query: 2 IEPGNIL 8
I+PGN+L
Sbjct: 92 IKPGNVL 98


>sp|RL2_METVA|LARGE ribosomal subunit protein uL2|Methanococcus vannielii

Query: 2 IEPGNIL 8
I+PGN+L
Sbjct: 92 IKPGNVL 98


>sp|RL2_METMP|LARGE ribosomal subunit protein uL2|Methanococcus maripaludis (strain

Query: 2 IEPGNIL 8
I+PGN+L
Sbjct: 92 IKPGNVL 98


>sp|RL2_METM7|LARGE ribosomal subunit protein uL2|Methanococcus maripaludis (strain

Query: 2 IEPGNIL 8
I+PGN+L
Sbjct: 92 IKPGNVL 98


>sp|RL2_METM6|LARGE ribosomal subunit protein uL2|Methanococcus maripaludis (strain

Query: 2 IEPGNIL 8
I+PGN+L
Sbjct: 92 IKPGNVL 98


>sp|RL2_METM5|LARGE ribosomal subunit protein uL2|Methanococcus maripaludis (strain

Query: 2 IEPGNIL 8
I+PGN+L
Sbjct: 92 IKPGNVL 98


>sp|RL2_META3|LARGE ribosomal subunit protein uL2|Methanococcus aeolicus (strain ATCC

Query: 2 IEPGNIL 8
I+PGN+L
Sbjct: 92 IKPGNVL 98


>sp|RFCS_METKA|REPLICATION factor C small subunit|Methanopyrus kandleri (strain AV19 /

Query: 4 PGNILFF 10
PGN +FF
Sbjct: 371 PGNEMFF 377


>sp|AATA_METS5|A-TYPE ATP synthase subunit A|Metallosphaera sedula (strain ATCC 51363

Query: 2 IEPGNIL 8
+EPG+IL
Sbjct: 130 VEPGDIL 136


>sp|Y1637_METJA|UNCHARACTERIZED protein MJ1637|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IEPGNILFF 10
IEP +L+F
Sbjct: 99 IEPNRVLYF 107


>sp|RIBL_ACIB4|FAD synthase|Aciduliprofundum boonei (strain DSM 19572

Query: 1 MIEPGNILFF 10
++ PG++LF
Sbjct: 12 ILHPGHVLFL 21




55|SequenceR|280|271|GALKSMIEPG

>sp|HPPA1_METMA|K(+)-STIMULATED pyrophosphate-energized sodium pump|Methanosarcina mazei (strain

Query: 2 ALKSMIEPG 10
ALK MI PG
Sbjct: 564 ALKEMIPPG 572


>sp|HPPA1_METAC|PUTATIVE K(+)-stimulated pyrophosphate-energized sodium pump|Methanosarcina

Query: 2 ALKSMIEPG 10
ALK MI PG
Sbjct: 564 ALKEMIPPG 572


>sp|SYR_METB6|ARGININE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 GALKSMIEPG 10
ALK+ ++PG
Sbjct: 91 AALKAAVQPG 100


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 2 ALKSMIEPG 10
++K+MI PG
Sbjct: 502 SIKNMISPG 510


>sp|Y3537_METJA|UNCHARACTERIZED protein MJECL37|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LKSMIEP 9
+KSM+EP
Sbjct: 87 VKSMVEP 93


>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 1 GALKSMIE 8
GAL+S+IE
Sbjct: 486 GALESLIE 493


>sp|COBQ_THEGJ|PROBABLE cobyric acid synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 4 KSMIEPG 10
KS++EPG
Sbjct: 203 KSLLEPG 209


>sp|RIBL_METJA|FAD synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GALKSMIEP 9
G+LK+ +EP
Sbjct: 73 GSLKNKLEP 81




56|SequenceR|285|276|NSESEGALKS

>sp|GUAAB_METMJ|GMP synthase [glutamine-hydrolyzing] subunit B|Methanoculleus

Query: 3 ESEGALKS 10
ESEG +KS
Sbjct: 133 ESEGGIKS 140


>sp|GUAAB_METPE|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosphaerula

Query: 3 ESEGALKS 10
ESEG +KS
Sbjct: 133 ESEGGIKS 140


>sp|GUAAB_METAR|GMP synthase [glutamine-hydrolyzing] subunit B|Methanocella arvoryzae

Query: 3 ESEGALKS 10
ESEG +KS
Sbjct: 133 ESEGGIKS 140


>sp|GUAAB_METMA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina mazei

Query: 3 ESEGALKS 10
ESEG +KS
Sbjct: 133 ESEGGIKS 140


>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NSESEGAL 8
NSE+ GAL
Sbjct: 321 NSETSGAL 328


>sp|GUAAB_METAC|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina

Query: 3 ESEGALKS 10
ESEG +KS
Sbjct: 133 ESEGGIKS 140


>sp|GUAAB_METBF|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina barkeri

Query: 3 ESEGALKS 10
ESEG +KS
Sbjct: 133 ESEGGIKS 140


>sp|GUAAB_METB6|GMP synthase [glutamine-hydrolyzing] subunit B|Methanoregula boonei

Query: 3 ESEGALKS 10
ESEG +KS
Sbjct: 133 ESEGGIKS 140


>sp|Y1137_METTH|UNCHARACTERIZED protein MTH_1137|Methanothermobacter thermautotrophicus (strain

Query: 1 NSESEGALKS 10
NS+ EGA S
Sbjct: 468 NSDDEGAYSS 477


>sp|GUAAB_NATPD|GMP synthase [glutamine-hydrolyzing] subunit B|Natronomonas pharaonis

Query: 3 ESEGALKS 10
ESEG +KS
Sbjct: 134 ESEGTIKS 141




57|SequenceR|290|281|FAKRLNSESE

>sp|CHEB_HALMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Haloarcula marismortui

Query: 1 FAKRLNSESE 10
FA+R+N+ S+
Sbjct: 221 FAERINTRSD 230


>sp|SYH_METPE|HISTIDINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 FAKRLNSESE 10
FAK L +ES+
Sbjct: 266 FAKNLGAESQ 275




58|SequenceR|295|286|KEAEEFAKRL

>sp|G3P_AERPE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KEAEEFAKR 9
KEAEEF KR
Sbjct: 58 KEAEEFEKR 66


>sp|EF1A_SACS2|ELONGATION factor 1-alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KEAEEFAKRL 10
KEAEE AK+L
Sbjct: 39 KEAEEAAKKL 48


>sp|EF1A_SULAC|ELONGATION factor 1-alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KEAEEFAKRL 10
KEAEE AK+L
Sbjct: 39 KEAEEAAKKL 48


>sp|ATGT_METJA|TRNA-GUANINE(15) transglycosylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KEAEEFAK 8
KEAEEFA+
Sbjct: 584 KEAEEFAR 591


>sp|EF1A_METS5|ELONGATION factor 1-alpha|Metallosphaera sedula (strain ATCC 51363

Query: 1 KEAEEFAKRL 10
KEAEE AK+L
Sbjct: 39 KEAEEAAKKL 48


>sp|LYSZ_SULTO|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KEAEEFAKRL 10
KEA+E +KR+
Sbjct: 207 KEAKELSKRI 216


>sp|EF1A_SULTO|ELONGATION factor 1-alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KEAEEFAKRL 10
KEAEE AK+L
Sbjct: 39 KEAEEAAKKL 48


>sp|LEUC_PYRHO|3-ISOPROPYLMALATE dehydratase large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 KEAEEFAKR 9
KE EFA+R
Sbjct: 68 KEIREFARR 76


>sp|GATE_PYRIL|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum islandicum (strain DSM 4184

Query: 3 AEEFAKRL 10
AEE AKRL
Sbjct: 548 AEEVAKRL 555


>sp|RF1_THESM|PEPTIDE chain release factor subunit|Thermococcus sibiricus (strain DSM

Query: 1 KEAEEFAKRL 10
+EA EF KR+
Sbjct: 190 QEAHEFMKRI 199


>sp|AATE_METMA|A-TYPE ATP synthase subunit E|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KEAEEFAKRL 10
KE+EE K+L
Sbjct: 123 KESEELVKKL 132


>sp|KPRS_PYRAE|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 AEEFAKRL 10
AEEFAK L
Sbjct: 141 AEEFAKAL 148


>sp|Y1187_METJA|UNCHARACTERIZED protein MJ1187|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EEFAKRL 10
EEFAK+L
Sbjct: 195 EEFAKKL 201


>sp|ATGT_PYRHO|TRNA-GUANINE(15) transglycosylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KEAEEFAKR 9
KEAE FA++
Sbjct: 514 KEAEPFARK 522


>sp|HEM1_ARCFU|GLUTAMYL-TRNA reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 AEEFAKRL 10
AEE AKR+
Sbjct: 207 AEELAKRI 214


>sp|ATGT_PYRFU|TRNA-GUANINE(15) transglycosylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KEAEEFAKR 9
KEAE FA++
Sbjct: 514 KEAEPFARK 522




59|SequenceR|300|291|IAPANKEAEE

>sp|DNAJ_PICTO|CHAPERONE protein DnaJ|Picrophilus torridus (strain ATCC 700027

Query: 3 PANKEAEE 10
P NKEAEE
Sbjct: 37 PGNKEAEE 44


>sp|RFCL_METMA|REPLICATION factor C large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IAPANKEA 8
++PANKEA
Sbjct: 562 MSPANKEA 569


>sp|AKSA_METTH|HOMOCITRATE synthase AksA|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 IAPANKEAE 9
++P NKEAE
Sbjct: 5 VSPFNKEAE 13


>sp|Y1057_METJA|UNCHARACTERIZED glycosyltransferase MJ1057|Methanocaldococcus jannaschii (strain

Query: 3 PANKEAEE 10
P NK+AEE
Sbjct: 48 PNNKKAEE 55


>sp|KORC_METTH|2-OXOGLUTARATE synthase subunit KorC|Methanothermobacter thermautotrophicus

Query: 2 APANKEAEE 10
APA + AEE
Sbjct: 121 APATRTAEE 129


>sp|IF2A_STAMF|TRANSLATION initiation factor 2 subunit|Staphylothermus marinus (strain ATCC

Query: 1 IAPANKEAEE 10
IAP KEAE+
Sbjct: 231 IAPDYKEAEK 240


>sp|KORC_METTM|2-OXOGLUTARATE synthase subunit KorC|Methanothermobacter marburgensis (strain ATCC

Query: 2 APANKEAEE 10
APA + AEE
Sbjct: 118 APATRTAEE 126




60|SequenceR|305|296|EDIFIIAPAN

>sp|RS4E_HYPBU|SMALL ribosomal subunit protein eS4|Hyperthermus butylicus (strain DSM

Query: 1 EDIFIIAPAN 10
E +F+IAP N
Sbjct: 233 EYVFVIAPPN 242


>sp|Y730_METJA|UNCHARACTERIZED protein MJ0730|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DIFIIAPA 9
D+F++APA
Sbjct: 82 DLFLVAPA 89


>sp|Y900_METJA|UNCHARACTERIZED protein MJ0900|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDIFIIAPAN 10
EDI +I P N
Sbjct: 183 EDIHVIGPKN 192


>sp|CIMA_ARCFU|PUTATIVE (R)-citramalate synthase CimA|Archaeoglobus fulgidus (strain ATCC

Query: 1 EDIFIIAPAN 10
E IF++AP++
Sbjct: 88 ESIFMVAPSS 97


>sp|GATC_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit C|Sulfurisphaera tokodaii (strain DSM

Query: 1 EDIFIIAPA 9
ED FI+ PA
Sbjct: 85 EDGFIVGPA 93


>sp|SURE_ARCFU|5'-NUCLEOTIDASE SurE|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DIFIIAPA 9
++F++APA
Sbjct: 28 EVFVVAPA 35


>sp|ILVC_METMA|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina mazei (strain ATCC

Query: 2 DIFIIAP 8
D+F++AP
Sbjct: 124 DVFMVAP 130


>sp|Y1222_METJA|UNCHARACTERIZED protein MJ1222|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDIFIIAPA 9
++IF++ PA
Sbjct: 17 DEIFVVVPA 25


>sp|NADK_THEGJ|NAD kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 DIFIIAPAN 10
++F+IAP N
Sbjct: 194 ELFVIAPIN 202


>sp|ILVC_METAC|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina acetivorans (strain ATCC

Query: 2 DIFIIAP 8
D+F++AP
Sbjct: 124 DVFMVAP 130


>sp|TRPA_METTH|TRYPTOPHAN synthase alpha chain|Methanothermobacter thermautotrophicus (strain

Query: 1 EDIFIIAP 8
+ IFI+AP
Sbjct: 150 DQIFIVAP 157


>sp|TRPA_METTM|TRYPTOPHAN synthase alpha chain|Methanothermobacter marburgensis (strain ATCC

Query: 1 EDIFIIAP 8
+ IFI+AP
Sbjct: 144 DQIFIVAP 151




61|SequenceR|310|301|AIADLEDIFI

>sp|TOP6B_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AIADLEDIF 9
+IAD+E+I+
Sbjct: 473 SIADIEEIY 481


>sp|MFNA_METTP|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanothrix thermoacetophila

Query: 2 IADLEDIFI 10
++DLED+ I
Sbjct: 369 LSDLEDVLI 377


>sp|COFD_METHJ|2-PHOSPHO-L-LACTATE transferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 ADLEDIFI 10
ADL D+FI
Sbjct: 254 ADLVDVFI 261


>sp|RIBL_METHJ|FAD synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 IADLEDIF 9
+ DLED+F
Sbjct: 69 LGDLEDMF 76


>sp|Y1627_ARCFU|UNCHARACTERIZED HTH-type transcriptional regulator AF_1627|Archaeoglobus fulgidus

Query: 3 ADLEDIFI 10
A +EDIFI
Sbjct: 54 AKIEDIFI 61


>sp|TRPB_METJA|TRYPTOPHAN synthase beta chain|Methanocaldococcus jannaschii (strain ATCC

Query: 1 AIADLEDIF 9
AIA+LE+ F
Sbjct: 33 AIAELEEAF 41


>sp|HTR18_HALS3|TRANSDUCER protein Htr18|Halobacterium salinarum (strain ATCC 29341

Query: 1 AIADLED 7
AIADLED
Sbjct: 393 AIADLED 399




62|SequenceR|315|306|KERKPAIADL

>sp|PIMT_METHJ|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 ERKPAIADL 10
ER PA+ADL
Sbjct: 107 ERIPAVADL 115


>sp|APGM_SACI6|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 RKPAIADL 10
KPAI+DL
Sbjct: 32 NKPAISDL 39


>sp|APGM_SACI4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.14.25

Query: 3 RKPAIADL 10
KPAI+DL
Sbjct: 32 NKPAISDL 39


>sp|APGM_SACI3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.27)

Query: 3 RKPAIADL 10
KPAI+DL
Sbjct: 32 NKPAISDL 39


>sp|APGM_SACI7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain

Query: 3 RKPAIADL 10
KPAI+DL
Sbjct: 32 NKPAISDL 39


>sp|APGM_SACI2|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain L.S.2.15

Query: 3 RKPAIADL 10
KPAI+DL
Sbjct: 32 NKPAISDL 39


>sp|APGM_SACI1|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain

Query: 3 RKPAIADL 10
KPAI+DL
Sbjct: 32 NKPAISDL 39


>sp|RAD50_HALSA|DNA double-strand break repair Rad50|Halobacterium salinarum (strain

Query: 1 KERKPAIADL 10
KER A+ADL
Sbjct: 585 KERLDALADL 594


>sp|TRM1_METPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaerula palustris

Query: 1 KERKPAIADL 10
+R PA ADL
Sbjct: 81 NDRDPAAADL 90




63|SequenceR|320|311|VEGHTKERKP

>sp|Y2387_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 3 GHTKERKP 10
GH KER P
Sbjct: 133 GHLKERAP 140


>sp|GLMM_PYRAB|PROBABLE phosphoglucosamine mutase|Pyrococcus abyssi (strain GE5 /

Query: 1 VEGHTKER 8
+E HTKER
Sbjct: 423 LEAHTKER 430


>sp|GPMI_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EGHTKERKP 10
EG T+E++P
Sbjct: 287 EGFTREKRP 295


>sp|PPM_THEKO|PHOSPHOPENTOMUTASE kodakarensis (strain ATCC BAA-918

Query: 1 VEGHTKERKP 10
V+GH RKP
Sbjct: 196 VDGHFPGRKP 205


>sp|GLYA_ARCFU|SERINE hydroxymethyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 1 VEGHTK 6
+EGHTK
Sbjct: 27 IEGHTK 32


>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 VEGHTKERKP 10
+EG+ K KP
Sbjct: 196 IEGYVKVAKP 205


>sp|PCKA_AERPE|PHOSPHOENOLPYRUVATE carboxykinase (ATP)|Aeropyrum pernix (strain ATCC 700893

Query: 3 GHTKERK 9
GH K+RK
Sbjct: 403 GHAKDRK 409




64|SequenceR|325|316|VIRREVEGHT

>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 1 VIRREVEGH 9
+IR+ +EGH
Sbjct: 514 IIRKGLEGH 522


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 1 VIRREVEGH 9
+IR+ +EGH
Sbjct: 514 IIRKGLEGH 522


>sp|METK_SULAC|S-ADENOSYLMETHIONINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IRREVEGHT 10
I+REVEG T
Sbjct: 373 IKREVEGIT 381


>sp|PYRE_METHJ|OROTATE phosphoribosyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 1 VIRREVEGH 9
+IR+E +GH
Sbjct: 86 IIRKEQKGH 94


>sp|FAU1_SACS2|PROBABLE ribonuclease FAU-1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VIRREVEGH 9
V+RRE EG+
Sbjct: 303 VLRREFEGN 311


>sp|PYRB_METS3|ASPARTATE carbamoyltransferase catalytic subunit|Methanobrevibacter smithii

Query: 1 VIRREVEG 8
VIR E+EG
Sbjct: 107 VIRHELEG 114


>sp|ARLMC_PYRHO|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 1 VIRREVEGHT 10
VIR +VEG T
Sbjct: 236 VIREKVEGIT 245


>sp|FTSZ_METTH|CELL division protein FtsZ|Methanothermobacter thermautotrophicus

Query: 2 IRREVEG 8
IRRE+EG
Sbjct: 116 IRRELEG 122


>sp|DTDA_PYRCJ|D-AMINOACYL-TRNA deacylase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VIRREVEGHT 10
V+RR E HT
Sbjct: 206 VVRRAYEKHT 215


>sp|ARLY_METKA|ARGININOSUCCINATE lyase|Methanopyrus kandleri (strain AV19 /

Query: 2 IRREVEGHT 10
+RR VEG T
Sbjct: 437 LRRPVEGST 445


>sp|ENGB_HALWD|PROBABLE GTP-binding protein EngB|Haloquadratum walsbyi (strain DSM 16790

Query: 2 IRREVEGHT 10
+ RE+ GHT
Sbjct: 24 LMRELTGHT 32


>sp|AGLP_HALVD|HEXURONIC acid methyltransferase AglP|Haloferax volcanii (strain ATCC 29605

Query: 1 VIRREVEGH 9
V++ +VEGH
Sbjct: 170 VVKVDVEGH 178


>sp|HIS1_PYRFU|ATP phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IRREVEGH 9
IRR V GH
Sbjct: 197 IRRSVYGH 204


>sp|GATE_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina barkeri (strain Fusaro /

Query: 1 VIRREVE 7
+IRREVE
Sbjct: 252 IIRREVE 258




65|SequenceR|330|321|TLLQSVIRRE

***** No hits found ******


66|SequenceR|335|326|LGDMLTLLQS

>sp|RL15E_STAMF|LARGE ribosomal subunit protein eL15|Staphylothermus marinus (strain

Query: 2 GDMLTLLQ 9
GDMLTL++
Sbjct: 19 GDMLTLMR 26




67|SequenceR|340|331|HARQKLGDML

>sp|Y3621_HALWD|PUTATIVE metal transport protein HQ_3621A|Haloquadratum walsbyi (strain

Query: 1 HARQKLGD 8
HAR +LGD
Sbjct: 30 HARSELGD 37


>sp|RL11_METPE|LARGE ribosomal subunit protein uL11|Methanosphaerula palustris (strain

Query: 2 ARQKLGDML 10
AR KL DML
Sbjct: 105 ARMKLDDML 113


>sp|TRUA_PYRNV|TRNA pseudouridine synthase A|Pyrobaculum neutrophilum (strain DSM

Query: 1 HARQKLGDML 10
H R+ LGD+L
Sbjct: 27 HLRRALGDVL 36


>sp|CAPPA_METAC|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ARQKLGD 8
AR+KLGD
Sbjct: 413 AREKLGD 419


>sp|RPIA_HALLT|RIBOSE-5-PHOSPHATE isomerase A|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 HARQKLGD 8
HAR+KL D
Sbjct: 117 HAREKLVD 124


>sp|CUTB_SULAC|GLYCERALDEHYDE dehydrogenase medium chain|Sulfolobus acidocaldarius (strain ATCC

Query: 1 HARQKLGDM 9
HA + +GDM
Sbjct: 95 HATRTIGDM 103


>sp|RFCL_METST|REPLICATION factor C large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 HARQKLGDML 10
+A +KLGD+L
Sbjct: 7 YAPKKLGDVL 16


>sp|THS_METTL|CHAPERONIN subunit|Methanothermococcus thermolithotrophicus

Query: 2 ARQKLGDML 10
A++KLG+M+
Sbjct: 168 AKEKLGEMI 176


>sp|RPIA_NATPD|RIBOSE-5-PHOSPHATE isomerase A|Natronomonas pharaonis (strain ATCC 35678

Query: 1 HARQKLGD 8
HAR+KL D
Sbjct: 104 HAREKLVD 111


>sp|THIM_METHJ|HYDROXYETHYLTHIAZOLE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 HARQKLGDML 10
HA +++G+M+
Sbjct: 56 HAEEEVGEMV 65




68|SequenceR|345|336|AMVIVHARQK

***** No hits found ******


69|SequenceR|350|341|PRNTAAMVIV

>sp|ANTRA_HALVD|PROBABLE anion import ATP-binding protein|Haloferax volcanii (strain ATCC

Query: 1 PRNTAAM 7
PRNTAA+
Sbjct: 215 PRNTAAI 221


>sp|HEM11_PYRAR|GLUTAMYL-TRNA reductase 1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PRNTAA 6
PRNTAA
Sbjct: 259 PRNTAA 264




70|SequenceR|355|346|PDISNPRNTA

>sp|HEM1_METAR|GLUTAMYL-TRNA reductase|Methanocella arvoryzae (strain DSM 22066

Query: 2 DISNPRN 8
DI+NPRN
Sbjct: 265 DITNPRN 271


>sp|HEM1_METJA|GLUTAMYL-TRNA reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DISNPRNT 9
DI+NPR+T
Sbjct: 248 DIANPRDT 255


>sp|HEM1_METVS|GLUTAMYL-TRNA reductase|Methanococcus vannielii (strain ATCC 35089

Query: 2 DISNPRN 8
DI+NPR+
Sbjct: 246 DIANPRD 252


>sp|HEM1_METTP|GLUTAMYL-TRNA reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 DISNPRN 8
DI+NPR+
Sbjct: 268 DIANPRD 274


>sp|HEM1_METTM|GLUTAMYL-TRNA reductase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 DISNPRN 8
DI+NPR+
Sbjct: 257 DIANPRD 263


>sp|HEM1_METTH|GLUTAMYL-TRNA reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 DISNPRN 8
DI+NPR+
Sbjct: 260 DIANPRD 266


>sp|HEM1_METS3|GLUTAMYL-TRNA reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 DISNPRN 8
DI+NPR+
Sbjct: 260 DIANPRD 266


>sp|HEM1_METMA|GLUTAMYL-TRNA reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DISNPRN 8
DI+NPR+
Sbjct: 268 DIANPRD 274


>sp|HEM1_METM7|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C7 /

Query: 2 DISNPRN 8
DI+NPR+
Sbjct: 247 DIANPRD 253


>sp|HEM1_METM6|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C6 /

Query: 2 DISNPRN 8
DI+NPR+
Sbjct: 247 DIANPRD 253


>sp|HEM1_METM5|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C5 /

Query: 2 DISNPRN 8
DI+NPR+
Sbjct: 247 DIANPRD 253


>sp|HEM1_METKA|GLUTAMYL-TRNA reductase|Methanopyrus kandleri (strain AV19 /

Query: 2 DISNPRN 8
DI+NPR+
Sbjct: 264 DIANPRD 270


>sp|HEM1_METBF|GLUTAMYL-TRNA reductase|Methanosarcina barkeri (strain Fusaro /

Query: 2 DISNPRN 8
DI+NPR+
Sbjct: 269 DIANPRD 275


>sp|HEM1_METAC|GLUTAMYL-TRNA reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DISNPRN 8
DI+NPR+
Sbjct: 268 DIANPRD 274


>sp|GATE_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina barkeri (strain Fusaro /

Query: 1 PDISNPRN 8
PDI +PR+
Sbjct: 192 PDIKSPRH 199


>sp|HEM1_METMP|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain DSM 14266

Query: 2 DISNPRN 8
DI+NPR+
Sbjct: 247 DIANPRD 253


>sp|SYH_METTH|HISTIDINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 DISNPRNT 9
DIS PR T
Sbjct: 2 DISRPRGT 9


>sp|Y1362_METJA|UNCHARACTERIZED protein MJ1362|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PDISNP 6
PDI NP
Sbjct: 263 PDIENP 268


>sp|HEM1_META3|GLUTAMYL-TRNA reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 DISNPRNTA 10
DI+NPR+ +
Sbjct: 245 DIANPRDVS 253


>sp|GATE_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina acetivorans (strain ATCC

Query: 1 PDISNPRN 8
PDI +PR+
Sbjct: 192 PDIRSPRH 199


>sp|GATE_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina mazei (strain ATCC

Query: 1 PDISNPRN 8
PDI +PR+
Sbjct: 192 PDIKSPRH 199


>sp|SYM_IGNH4|METHIONINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PDISNPR 7
PD+ NPR
Sbjct: 166 PDLVNPR 172


>sp|Y670_METJA|UNCHARACTERIZED protein MJ0670|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DISNPR 7
D+SNPR
Sbjct: 84 DLSNPR 89


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DISNPRN 8
++SNPRN
Sbjct: 125 NLSNPRN 131


>sp|HEM1_CENSY|GLUTAMYL-TRNA reductase|Cenarchaeum symbiosum (strain A)

Query: 2 DISNPR 7
D+SNPR
Sbjct: 273 DLSNPR 278


>sp|GATB_SULAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfolobus acidocaldarius (strain ATCC

Query: 1 PDISNPR 7
PD+S+PR
Sbjct: 161 PDMSDPR 167


>sp|DNLJ_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 SNPRNTA 10
SNPRN A
Sbjct: 222 SNPRNAA 228


>sp|HYD1G_PYRFU|SULFHYDROGENASE 1 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 4 SNPRNTA 10
+NP+NTA
Sbjct: 210 TNPKNTA 216


>sp|DNAK_METBF|CHAPERONE protein DnaK|Methanosarcina barkeri (strain Fusaro /

Query: 3 ISNPRNT 9
ISNP NT
Sbjct: 59 ISNPENT 65


>sp|DNAK_METAC|CHAPERONE protein DnaK|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 ISNPRNT 9
ISNP NT
Sbjct: 59 ISNPENT 65


>sp|RL1_THEAC|LARGE ribosomal subunit protein uL1|Thermoplasma acidophilum (strain

Query: 2 DISNPRN 8
D+SNP+N
Sbjct: 36 DMSNPKN 42


>sp|GCSPB_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 4 SNPRNTA 10
S PRNTA
Sbjct: 449 SRPRNTA 455


>sp|DNAK_METTE|CHAPERONE protein DnaK|Methanosarcina thermophila

Query: 3 ISNPRNT 9
ISNP NT
Sbjct: 59 ISNPENT 65


>sp|Y817_ARCFU|UNCHARACTERIZED protein AF_0817|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DISNPRN 8
D+SNP N
Sbjct: 473 DLSNPEN 479




71|SequenceR|360|351|FRRLAPDISN

>sp|PYRDB_THEVO|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Thermoplasma volcanium (strain

Query: 1 FRRLAPDISN 10
F +L+P++SN
Sbjct: 161 FAKLSPNVSN 170


>sp|CAS4_PYRCJ|CRISPR-ASSOCIATED exonuclease Cas4|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 FRRLAPDISN 10
FRR++P I N
Sbjct: 50 FRRVSPSIIN 59


>sp|ALDC_METMA|ALPHA-ACETOLACTATE decarboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 LAPDISN 10
L PDISN
Sbjct: 47 LVPDISN 53


>sp|PGK_THEVO|PHOSPHOGLYCERATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FRRLAPDIS 9
FRR+ P+I+
Sbjct: 165 FRRIKPNIA 173


>sp|ARCS_METJA|ARCHAEOSINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FRRLAPDISN 10
+RR PD+ N
Sbjct: 241 YRRYEPDLRN 250


>sp|Y3016_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 FRRLAPDIS 9
F RL P+IS
Sbjct: 58 FNRLVPEIS 66


>sp|SEPS_METMJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FRRLAPDIS 9
FR LAP+ S
Sbjct: 174 FRELAPESS 182


>sp|CHEB2_METHJ|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 2|Methanospirillum

Query: 3 RLAPDI 8
RLAPDI
Sbjct: 45 RLAPDI 50




72|SequenceR|365|356|RDFRGFRRLA

>sp|METXA_METPE|HOMOSERINE O-acetyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 RDFRGF 6
R+FRGF
Sbjct: 245 REFRGF 250


>sp|ENO_METKA|ENOLASE kandleri (strain AV19 /

Query: 2 DFRGFRRL 9
DFRGF ++
Sbjct: 293 DFRGFAKI 300


>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain

Query: 3 FRGFRRL 9
FRGF R+
Sbjct: 38 FRGFERI 44


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain

Query: 3 FRGFRRL 9
FRGF R+
Sbjct: 38 FRGFERI 44


>sp|QUEC_AERPE|7-CYANO-7-DEAZAGUANINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 FRGFRRL 9
FRG RRL
Sbjct: 173 FRGMRRL 179


>sp|ENO_METLZ|ENOLASE labreanum (strain ATCC 43576

Query: 2 DFRGFRRL 9
DF GF R+
Sbjct: 280 DFEGFARI 287


>sp|KADA_METMJ|ADENYLATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 RDFRGFRRLA 10
RD G+R +A
Sbjct: 140 RDMEGYRAIA 149




73|SequenceR|370|361|GIDVERDFRG

>sp|PMDHS_THESM|PHOSPHOMEVALONATE dehydratase small subunit|Thermococcus sibiricus (strain DSM

Query: 2 IDVERDFRG 10
IDVE D RG
Sbjct: 38 IDVESDIRG 46


>sp|TRPC_SACS2|INDOLE-3-GLYCEROL phosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GIDVERD 7
G+DVERD
Sbjct: 59 GLDVERD 65


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 3 DVERDF 8
DVERDF
Sbjct: 52 DVERDF 57


>sp|ADEC_ARCFU|ADENINE deaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GIDVERDF 8
G+DVERD
Sbjct: 400 GVDVERDI 407


>sp|QUEC_METM6|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 GIDVERDFRG 10
GID E+ F G
Sbjct: 118 GIDAEKIFSG 127


>sp|QUEC_METM5|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 GIDVERDFRG 10
GID E+ F G
Sbjct: 118 GIDAEKIFSG 127


>sp|Y835_METJA|UNCHARACTERIZED protein MJ0835|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IDVERDFR 9
+D+E+D R
Sbjct: 158 VDIEKDIR 165


>sp|GCST_PYRFU|PROBABLE aminomethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GIDVERDFRG 10
G+++E D RG
Sbjct: 365 GVEIEIDIRG 374


>sp|FWDF_METJA|POLYFERREDOXIN protein FwdF|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GIDVERDFRG 10
I+VE+ F+G
Sbjct: 258 AIEVEKPFKG 267


>sp|Y280_METAC|UNCHARACTERIZED solute-binding protein MA_0280|Methanosarcina acetivorans (strain

Query: 1 GIDVERDFRG 10
G+DV+R+ G
Sbjct: 68 GVDVQREAAG 77


>sp|FLUC_THEON|FLUORIDE-SPECIFIC ion channel FluC|Thermococcus onnurineus (strain NA1)

Query: 1 GIDVERDFRG 10
GIDV D+R
Sbjct: 58 GIDVPADWRA 67


>sp|ACDB_METTH|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanothermobacter

Query: 4 VERDFRG 10
V RDFRG
Sbjct: 296 VNRDFRG 302


>sp|AATE_PYRNV|A-TYPE ATP synthase subunit E|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GIDVERDFRG 10
GI E+D RG
Sbjct: 142 GIVAEKDIRG 151


>sp|OGT_METKA|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 3 DVERDFRG 10
D+ER FRG
Sbjct: 26 DLERYFRG 33


>sp|KAD6_THEGJ|PUTATIVE adenylate kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 5 ERDFRG 10
ERDF+G
Sbjct: 60 ERDFKG 65


>sp|TRM56_THEVO|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermoplasma volcanium

Query: 1 GIDVERDFRG 10
G+D +R+FR
Sbjct: 62 GVDWKREFRN 71


>sp|COFE_HALMA|COENZYME F420:L-glutamate ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GIDVERDFRG 10
G+ RD+RG
Sbjct: 173 GLSASRDWRG 182




74|SequenceR|375|366|TADPIGIDVE

>sp|SYK_HALSA|LYSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 TADPIGIDVE 10
+AD +G+DVE
Sbjct: 141 SADRLGVDVE 150


>sp|CBIA_HALMA|COBYRINATE a,c-diamide synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 ADPIGIDVE 10
AD IG+D+E
Sbjct: 132 ADRIGVDIE 140


>sp|CBIX_SACI6|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 ADPIGID 8
ADP+G D
Sbjct: 103 ADPLGFD 109


>sp|CBIX_SACI4|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 ADPIGID 8
ADP+G D
Sbjct: 103 ADPLGFD 109


>sp|CBIX_SACI3|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain M.16.27)

Query: 2 ADPIGID 8
ADP+G D
Sbjct: 103 ADPLGFD 109


>sp|CBIX_SACI2|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 ADPIGID 8
ADP+G D
Sbjct: 103 ADPLGFD 109


>sp|CBIX_SACI1|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 ADPIGID 8
ADP+G D
Sbjct: 103 ADPLGFD 109


>sp|CBIX_SACS2|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ADPIGID 8
ADP+G D
Sbjct: 103 ADPLGFD 109


>sp|CBIX_SACI7|SIROHYDROCHLORIN cobaltochelatase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 ADPIGID 8
ADP+G D
Sbjct: 103 ADPLGFD 109


>sp|MEND_HALLT|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 ADPIGIDVE 10
ADP G+D E
Sbjct: 238 ADPPGLDAE 246


>sp|CBIX_SULTO|SIROHYDROCHLORIN cobaltochelatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ADPIGID 8
A+PIG+D
Sbjct: 93 AEPIGVD 99


>sp|DTDA_SACI7|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 TADPIGIDVE 10
T+DP+G+ ++
Sbjct: 9 TSDPVGLTIK 18


>sp|DTDA_SACI6|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 TADPIGIDVE 10
T+DP+G+ ++
Sbjct: 9 TSDPVGLTIK 18


>sp|DTDA_SACI4|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 TADPIGIDVE 10
T+DP+G+ ++
Sbjct: 9 TSDPVGLTIK 18


>sp|DTDA_SACI3|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 TADPIGIDVE 10
T+DP+G+ ++
Sbjct: 9 TSDPVGLTIK 18


>sp|DTDA_SACI2|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 TADPIGIDVE 10
T+DP+G+ ++
Sbjct: 9 TSDPVGLTIK 18


>sp|DTDA_SACI1|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 TADPIGIDVE 10
T+DP+G+ ++
Sbjct: 9 TSDPVGLTIK 18


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 TADPIGIDVE 10
TA +G+DVE
Sbjct: 464 TAGALGVDVE 473


>sp|SYE_PYRHO|GLUTAMATE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ADPIGIDVE 10
ADPI ++VE
Sbjct: 415 ADPIPMEVE 423


>sp|RL22_METMJ|LARGE ribosomal subunit protein uL22|Methanoculleus marisnigri (strain

Query: 2 ADPIGIDVE 10
A+ IG+DVE
Sbjct: 101 AEYIGLDVE 109


>sp|G1PDH_HALMA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Haloarcula marismortui (strain ATCC 43049

Query: 1 TADPIGIDVE 10
TAD +GID E
Sbjct: 305 TADELGIDDE 314


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 PIGIDVE 10
P+G+D+E
Sbjct: 785 PVGVDIE 791


>sp|HIS1_THEKO|ATP phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 3 DPIGIDVE 10
D IG+DVE
Sbjct: 119 DSIGVDVE 126


>sp|TRPF_METVO|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus voltae

Query: 1 TADPIGIDV 9
+ P+GIDV
Sbjct: 36 SVKPVGIDV 44


>sp|RPO6_METMA|DNA-DIRECTED RNA polymerase subunit Rpo6|Methanosarcina mazei (strain ATCC

Query: 3 DPIGIDVE 10
DP+G+ +E
Sbjct: 60 DPLGVAIE 67


>sp|DTDA_SACS2|D-AMINOACYL-TRNA deacylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TADPIGIDVE 10
T DP+G+ ++
Sbjct: 9 TLDPVGVTIK 18


>sp|SYE_PYRAB|GLUTAMATE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 ADPIGIDVE 10
ADP+ ++VE
Sbjct: 416 ADPVPMEVE 424




75|SequenceR|380|371|IELRGTADPI

>sp|SYH_HALWD|HISTIDINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IELRGTADPI 10
+++ GTADPI
Sbjct: 124 VDIFGTADPI 133


>sp|SYM_METAR|METHIONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 IELRGTADP 9
I+++GT DP
Sbjct: 409 IDVKGTIDP 417


>sp|HIS6_META3|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus aeolicus

Query: 1 IELRGTADPI 10
+ELR DP+
Sbjct: 24 VELRDAGDPV 33


>sp|HIS6_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 IELRGTADPI 10
+ELR DP+
Sbjct: 24 VELRDAGDPV 33


>sp|HIS6_METM7|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 IELRGTADPI 10
+ELR DP+
Sbjct: 24 VELRDAGDPV 33


>sp|HIS6_METM5|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 IELRGTADPI 10
+ELR DP+
Sbjct: 24 VELRDAGDPV 33


>sp|AROC_METTH|CHORISMATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 IELRGTADP 9
IE+RG DP
Sbjct: 330 IEVRGRHDP 338


>sp|HIS6_METVS|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus vannielii

Query: 1 IELRGTADPI 10
+ELR DP+
Sbjct: 24 LELRDAGDPV 33


>sp|Y2034_SULTO|UNCHARACTERIZED solute-binding protein STK_20340|Sulfurisphaera tokodaii (strain

Query: 1 IELRGTADP 9
+EL G DP
Sbjct: 120 VELEGNRDP 128


>sp|TRPF_METKA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanopyrus kandleri (strain AV19 /

Query: 1 IELRGTADP 9
++L GT DP
Sbjct: 78 VQLHGTEDP 86


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IELRGTADP 9
IEL+ T DP
Sbjct: 28 IELKETPDP 36


>sp|Y182_AERPE|UPF0235 protein APE_0182.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 IELRGTADP 9
+E+R ADP
Sbjct: 86 VEIRDVADP 94


>sp|TRPE_HALVD|ANTHRANILATE synthase component 1|Haloferax volcanii (strain ATCC 29605

Query: 2 ELRGTADPI 10
+LRG DP+
Sbjct: 276 KLRGQVDPV 284


>sp|AROC_PYRAB|CHORISMATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 IELRGTADP 9
I+LRG DP
Sbjct: 315 IKLRGRFDP 323


>sp|GUAAB_THEKO|GMP synthase [glutamine-hydrolyzing] subunit B|Thermococcus

Query: 2 ELRGTADP 9
EL+G DP
Sbjct: 89 ELKGVTDP 96


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 3 LRGTADPI 10
L+GTAD I
Sbjct: 1008 LKGTADKI 1015




76|SequenceR|385|376|THIQLIELRG

>sp|RRP4_ARCFU|EXOSOME complex component Rrp4|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 THIQLIELRG 10
TH+++I L+G
Sbjct: 42 THVRVIPLKG 51


>sp|MTAD_PYRFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 THIQLIELRG 10
TH+ ++ LRG
Sbjct: 59 THVSMVLLRG 68


>sp|GLYA_HALSA|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 THIQLIELR 9
TH+ L++LR
Sbjct: 312 THLVLVDLR 320


>sp|GLYA_HALS3|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 THIQLIELR 9
TH+ L++LR
Sbjct: 312 THLVLVDLR 320




77|SequenceR|390|381|LKMNKTHIQL

>sp|Y280_METSM|UPF0280 protein ORFE|Methanobrevibacter smithii

Query: 1 LKMNKTHIQL 10
+ +N+THI+L
Sbjct: 5 IDLNQTHIRL 14


>sp|Y088_METS3|UPF0280 protein Msm_0088|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LKMNKTHIQL 10
+ +N+THI+L
Sbjct: 6 IDLNQTHIRL 15


>sp|RL37_SACS2|LARGE ribosomal subunit protein eL37|Saccharolobus solfataricus (strain

Query: 2 KMNKTHIQL 10
KMNK+H +
Sbjct: 9 KMNKSHTHI 17


>sp|RL37_SACI7|LARGE ribosomal subunit protein eL37|Saccharolobus islandicus (strain

Query: 2 KMNKTHIQL 10
KMNK+H +
Sbjct: 9 KMNKSHTHI 17


>sp|RL37_SACI6|LARGE ribosomal subunit protein eL37|Saccharolobus islandicus (strain

Query: 2 KMNKTHIQL 10
KMNK+H +
Sbjct: 9 KMNKSHTHI 17


>sp|RL37_SACI4|LARGE ribosomal subunit protein eL37|Saccharolobus islandicus (strain

Query: 2 KMNKTHIQL 10
KMNK+H +
Sbjct: 9 KMNKSHTHI 17


>sp|RL37_SACI3|LARGE ribosomal subunit protein eL37|Saccharolobus islandicus (strain

Query: 2 KMNKTHIQL 10
KMNK+H +
Sbjct: 9 KMNKSHTHI 17


>sp|RL37_SACI2|LARGE ribosomal subunit protein eL37|Saccharolobus islandicus (strain

Query: 2 KMNKTHIQL 10
KMNK+H +
Sbjct: 9 KMNKSHTHI 17




78|SequenceR|395|386|DVDDALKMNK

>sp|RPO2C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo2C|Archaeoglobus fulgidus (strain ATCC

Query: 1 DVDDALKMNK 10
+++DAL MNK
Sbjct: 217 NIEDALIMNK 226


>sp|Y496_METJA|UNCHARACTERIZED protein MJ0496|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DVDDALKMN 9
DV+D++KMN
Sbjct: 32 DVEDSIKMN 40


>sp|Y1996_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 VDDALKM 8
VDDALKM
Sbjct: 130 VDDALKM 136


>sp|RPO2C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 1 DVDDALKMNK 10
+++DAL MNK
Sbjct: 220 NIEDALVMNK 229


>sp|RPO2C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 1 DVDDALKMNK 10
+++DAL MNK
Sbjct: 220 NIEDALVMNK 229


>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 2 VDDALKMNK 10
+DD LK+NK
Sbjct: 49 IDDYLKVNK 57


>sp|GLYA_SULTO|SERINE hydroxymethyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DVDDALKM 8
DVD A+KM
Sbjct: 152 DVDKAIKM 159


>sp|NAT_SULTO|N-ALPHA-ACETYLTRANSFERASE tokodaii (strain DSM 16993

Query: 1 DVDDALKMNK 10
DVD +K+N+
Sbjct: 21 DVDQIIKINR 30


>sp|GLYA_SACI6|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 DVDDALKM 8
DVD A+KM
Sbjct: 151 DVDKAIKM 158


>sp|GLYA_SACI4|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DVDDALKM 8
DVD A+KM
Sbjct: 151 DVDKAIKM 158


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DVDDALKMNK 10
DVD ALK +K
Sbjct: 213 DVDTALKSSK 222


>sp|CUTA_SULAC|GLYCERALDEHYDE dehydrogenase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 1 DVDDALKMN 9
D DALK+N
Sbjct: 50 DATDALKVN 58


>sp|GLYA_SACI2|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 DVDDALKM 8
DVD A+KM
Sbjct: 151 DVDKAIKM 158


>sp|GLYA_SACI7|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 DVDDALKM 8
DVD A+KM
Sbjct: 151 DVDKAIKM 158


>sp|GLYA_SACI3|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 DVDDALKM 8
DVD A+KM
Sbjct: 151 DVDKAIKM 158


>sp|GLYA_SACI1|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 DVDDALKM 8
DVD A+KM
Sbjct: 151 DVDKAIKM 158


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DVDDALKMNK 10
DVD ALK +K
Sbjct: 220 DVDTALKSSK 229


>sp|GLYA_SACS2|SERINE hydroxymethyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 DVDDALKM 8
DVD A+KM
Sbjct: 151 DVDKAIKM 158


>sp|NADE_AERPE|NH(3)-DEPENDENT NAD(+) synthetase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DVDDALKM 8
DV+DAL++
Sbjct: 81 DVEDALRL 88


>sp|DHQS_METPE|3-DEHYDROQUINATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 VDDALKMN 9
VDDA K+N
Sbjct: 29 VDDAAKVN 36


>sp|Y836_METJA|UNCHARACTERIZED protein MJ0836|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DVDDALKM 8
D+D+ALK+
Sbjct: 91 DIDEALKL 98




79|SequenceR|400|391|AVQELDVDDA

>sp|RS19_HALLT|SMALL ribosomal subunit protein uS19|Halorubrum lacusprofundi (strain

Query: 2 VQELDVDD 9
+QE+DVD+
Sbjct: 24 LQEMDVDE 31




80|SequenceR|405|396|GHTENAVQEL

>sp|IMDH_NITMS|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 GHTENAV 7
GH+ENA+
Sbjct: 248 GHSENAI 254


>sp|PRIS_METBU|DNA primase small subunit PriS|Methanococcoides burtonii (strain DSM

Query: 2 HTENAVQEL 10
H E VQEL
Sbjct: 364 HVEEGVQEL 372


>sp|CSG2_HALHT|CELL surface glycoprotein 2|Haloarcula hispanica (strain ATCC 33960

Query: 1 GHTENAV 7
G+TENAV
Sbjct: 350 GNTENAV 356




81|SequenceR|410|401|DAGVHGHTEN

>sp|Y2414_ARCFU|UNCHARACTERIZED HTH-type transcriptional regulator AF_2414|Archaeoglobus fulgidus

Query: 1 DAGVHGHT 8
D +HGHT
Sbjct: 125 DKAIHGHT 132


>sp|Y2595_SACS2|UPF0310 protein SSO2595|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DAGVHGHTEN 10
D G++G+ EN
Sbjct: 18 DKGIYGYKEN 27


>sp|SRP54_AERPE|SIGNAL recognition particle 54 kDa|Aeropyrum pernix (strain ATCC 700893

Query: 2 AGVHGHTE 9
AG HGH E
Sbjct: 186 AGRHGHGE 193


>sp|MRE11_PYRAB|DNA double-strand break repair protein|Pyrococcus abyssi (strain GE5 /

Query: 1 DAGVHGHTEN 10
D + GH+EN
Sbjct: 277 DVHIKGHSEN 286


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 5 HGHTE 9
HGHTE
Sbjct: 380 HGHTE 384


>sp|RBL_METJA|RIBULOSE bisphosphate carboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 AGVHGHTE 9
GVHGH +
Sbjct: 378 GGVHGHPD 385


>sp|IMDH_NITMS|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Nitrosopumilus maritimus (strain SCM1)

Query: 5 HGHTEN 10
HGH+EN
Sbjct: 247 HGHSEN 252


>sp|MCR_SULTO|MALONYL-COA reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 AGVHGHTE 9
A +HGH E
Sbjct: 243 ATIHGHYE 250


>sp|TRUA_ARCFU|TRNA pseudouridine synthase A|Archaeoglobus fulgidus (strain ATCC

Query: 1 DAGVHGHTE 9
DAGVH + +
Sbjct: 52 DAGVHAYGQ 60


>sp|RS4_THEON|SMALL ribosomal subunit protein uS4|Thermococcus onnurineus (strain NA1)

Query: 4 VHGHTE 9
VHGH E
Sbjct: 126 VHGHIE 131


>sp|RS4_THEKO|SMALL ribosomal subunit protein uS4|Thermococcus kodakarensis (strain

Query: 4 VHGHTE 9
VHGH E
Sbjct: 126 VHGHIE 131


>sp|RS4_THEGJ|SMALL ribosomal subunit protein uS4|Thermococcus gammatolerans (strain

Query: 4 VHGHTE 9
VHGH E
Sbjct: 126 VHGHIE 131


>sp|RS4_PYRHO|SMALL ribosomal subunit protein uS4|Pyrococcus horikoshii (strain ATCC

Query: 4 VHGHTE 9
VHGH E
Sbjct: 126 VHGHIE 131


>sp|RS4_PYRFU|SMALL ribosomal subunit protein uS4|Pyrococcus furiosus (strain ATCC

Query: 4 VHGHTE 9
VHGH E
Sbjct: 126 VHGHIE 131


>sp|RS4_PYRAB|SMALL ribosomal subunit protein uS4|Pyrococcus abyssi (strain GE5 /

Query: 4 VHGHTE 9
VHGH E
Sbjct: 126 VHGHIE 131


>sp|MCR_METS5|MALONYL CoA reductase (NADP)|Metallosphaera sedula (strain ATCC 51363

Query: 2 AGVHGHTE 9
A +HGH E
Sbjct: 240 ATIHGHYE 247


>sp|RS4_THESM|SMALL ribosomal subunit protein uS4|Thermococcus sibiricus (strain DSM

Query: 4 VHGHTE 9
VHGH E
Sbjct: 126 VHGHIE 131


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 1 DAGVHG 6
D GVHG
Sbjct: 320 DVGVHG 325


>sp|Y1815_ARCFU|UNCHARACTERIZED aminotransferase AF_1815|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AGVHGHT 8
G HGHT
Sbjct: 144 GGYHGHT 150


>sp|DAPAL_HALSA|UNCHARACTERIZED DapA-like lyase VNG_0444G|Halobacterium salinarum (strain ATCC

Query: 1 DAGVHG 6
DAGVHG
Sbjct: 47 DAGVHG 52


>sp|DAPAL_HALS3|UNCHARACTERIZED DapA-like lyase OE_1665R|Halobacterium salinarum (strain ATCC

Query: 1 DAGVHG 6
DAGVHG
Sbjct: 47 DAGVHG 52


>sp|QUED_PYRHO|PUTATIVE 6-carboxy-5,6,7,8-tetrahydropterin synthase|Pyrococcus horikoshii

Query: 4 VHGHT 8
+HGHT
Sbjct: 34 IHGHT 38




82|SequenceR|415|406|CLAALDAGVH

>sp|SELD_METKA|SELENIDE, water dikinase|Methanopyrus kandleri (strain AV19 /

Query: 3 AALDAGVH 10
AAL+ GVH
Sbjct: 220 AALEVGVH 227


>sp|KHSE_THEKO|HOMOSERINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 AALDAGVH 10
AALDAG +
Sbjct: 235 AALDAGAY 242


>sp|AROK_METTP|SHIKIMATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 AALDAGV 9
AALDAGV
Sbjct: 120 AALDAGV 126


>sp|Y3270_HALS3|UNCHARACTERIZED solute-binding protein OE_3270R|Halobacterium salinarum (strain

Query: 1 CLAALDAGVH 10
CL DA +H
Sbjct: 26 CLTGADASIH 35


>sp|Y1595_HALSA|UNCHARACTERIZED solute-binding protein VNG_1595C|Halobacterium salinarum (strain

Query: 1 CLAALDAGVH 10
CL DA +H
Sbjct: 26 CLTGADASIH 35




83|SequenceR|420|411|LAAESCLAAL

***** No hits found ******


84|SequenceR|425|416|KRIAQLAAES

***** No hits found ******


85|SequenceR|430|421|ILDMKKRIAQ

>sp|HIS6_THEON|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus onnurineus

Query: 1 ILDMKKRIAQ 10
+LD+ KRIA+
Sbjct: 62 LLDLVKRIAE 71


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 1 ILDMKKRI 8
I+DM+KRI
Sbjct: 459 IVDMEKRI 466




86|SequenceR|435|426|EDELDILDMK

>sp|KAE1B_METVS|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 EDELDILDMK 10
E+ELDIL+ K
Sbjct: 335 ENELDILNKK 344


>sp|PDXT_METTH|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanothermobacter

Query: 1 EDELDILDMK 10
EDE+DIL K
Sbjct: 119 EDEIDILGRK 128


>sp|Y1574_METJA|UNCHARACTERIZED ATP-dependent helicase MJ1574|Methanocaldococcus jannaschii (strain

Query: 1 EDELDILDM 9
E+E+DILD+
Sbjct: 581 EEEIDILDI 589


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 ELDILDMK 10
E+D+LD+K
Sbjct: 854 EVDVLDIK 861


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 ELDILDMK 10
E+D+LD+K
Sbjct: 854 EVDVLDVK 861


>sp|PYRK_THEKO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermococcus kodakarensis

Query: 1 EDELDILDMK 10
+DEL +LD++
Sbjct: 127 KDELSLLDIE 136




87|SequenceR|440|431|EADITEDELD

>sp|THI4_AERPE|THIAMINE thiazole synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EADITEDELD 10
EAD+TE LD
Sbjct: 8 EADVTEAILD 17


>sp|SRP54_THEAC|SIGNAL recognition particle 54 kDa|Thermoplasma acidophilum (strain ATCC

Query: 1 EADITEDE 8
EADITE+E
Sbjct: 303 EADITEEE 310


>sp|NPD1_PYRAE|NAD-DEPENDENT protein deacetylase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 DITEDELD 10
D T DELD
Sbjct: 4 DFTTDELD 11


>sp|RRP41_THEAC|EXOSOME complex component Rrp41|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 ADITEDEL 9
D+TEDEL
Sbjct: 206 GDVTEDEL 213


>sp|FTHS_METLZ|FORMATE--TETRAHYDROFOLATE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 DITEDELD 10
DIT DEL+
Sbjct: 29 DITPDELE 36


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 3 DITEDELD 10
DIT DELD
Sbjct: 468 DITLDELD 475


>sp|THYX_SACS2|FLAVIN-DEPENDENT thymidylate synthase|Saccharolobus solfataricus (strain ATCC

Query: 1 EADITEDELD 10
E D+T+DE++
Sbjct: 34 EKDMTDDEIE 43




88|SequenceR|445|436|LSNMVEADIT

>sp|PYRG_SULTO|CTP synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SNMVEADIT 10
SNM ADIT
Sbjct: 130 SNMANADIT 138


>sp|Y1787_ARCFU|PUTATIVE HTH-type transcriptional regulatory protein|Archaeoglobus fulgidus

Query: 1 LSNMVEADIT 10
L N VEADI+
Sbjct: 187 LLNFVEADIS 196


>sp|PYRH_NATPD|URIDYLATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LSNMVEADI 9
L+ MVEAD+
Sbjct: 127 LAEMVEADL 135


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 NMVEADI 9
NMVEA+I
Sbjct: 324 NMVEAEI 330


>sp|Y1313_METMA|UPF0200 protein MM_1313|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LSNMVEADI 9
LSN +EAD+
Sbjct: 177 LSNYLEADL 185




89|SequenceR|450|441|DMTVALSNMV

>sp|SYE_PYRNV|GLUTAMATE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 DMTVALSNM 9
D TVALSN+
Sbjct: 391 DTTVALSNL 399


>sp|SYE_PYRCJ|GLUTAMATE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 DMTVALSNM 9
D TVALSN+
Sbjct: 391 DSTVALSNL 399


>sp|SYE_PYRIL|GLUTAMATE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DMTVALSNM 9
D T+ALSN+
Sbjct: 391 DSTIALSNL 399


>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 DMTVALSNM 9
D TVAL+N+
Sbjct: 391 DSTVALANL 399


>sp|SYE_PYRAE|GLUTAMATE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DMTVALSNM 9
D TVAL+N+
Sbjct: 391 DSTVALANL 399


>sp|PUR2_METB6|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanoregula boonei (strain DSM 21154

Query: 1 DMTVALSNMV 10
D+T ALS MV
Sbjct: 242 DLTAALSIMV 251




90|SequenceR|455|446|AWRFDDMTVA

>sp|ATGT_HALSA|TRNA-GUANINE(15) transglycosylase|Halobacterium salinarum (strain ATCC 700922

Query: 2 WRFDDMTVA 10
+R+DDMT A
Sbjct: 204 YRYDDMTEA 212


>sp|BGAL_SACSH|BETA-GALACTOSIDASE shibatae (strain ATCC 51178

Query: 1 AWRFDDM 7
AW+FDD+
Sbjct: 191 AWKFDDL 197


>sp|BGAL_SACS2|BETA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 1 AWRFDDM 7
AW+FDD+
Sbjct: 191 AWKFDDL 197


>sp|Y584_THEVO|PROTEIN TV0584|Thermoplasma volcanium (strain ATCC 51530

Query: 4 FDDMTV 9
FDDMTV
Sbjct: 74 FDDMTV 79


>sp|Y487_THEAC|PROTEIN Ta0487|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 FDDMTV 9
FDDMTV
Sbjct: 74 FDDMTV 79


>sp|ATGT_HALVD|TRNA-GUANINE(15) transglycosylase|Haloferax volcanii (strain ATCC 29605

Query: 1 AWRFDDM 7
A+R+DDM
Sbjct: 203 AYRYDDM 209


>sp|Y1446_ARCFU|UNCHARACTERIZED protein AF_1446|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WRFDDMTV 9
+RFDD+ V
Sbjct: 301 YRFDDLDV 308


>sp|Y799_METJA|UNCHARACTERIZED protein MJ0799|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WRFDDM 7
W FDD+
Sbjct: 28 WHFDDL 33


>sp|TIAS_ACIS3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Acidilobus saccharovorans

Query: 2 WRFDD 6
WRFD+
Sbjct: 230 WRFDE 234


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 AWRFDDMTV 9
AW DD TV
Sbjct: 1010 AWDIDDKTV 1018


>sp|TFE_METST|TRANSCRIPTION factor E|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 WRFDDMTVA 10
WRFD A
Sbjct: 94 WRFDSRKAA 102


>sp|GLCDH_METS5|GLUCOSE 1-dehydrogenase|Metallosphaera sedula (strain ATCC 51363

Query: 2 WRFDDMT 8
WR DD T
Sbjct: 170 WRCDDST 176


>sp|RS7_NANEQ|SMALL ribosomal subunit protein uS7|Nanoarchaeum equitans (strain

Query: 2 WRFDDMTV 9
W ++D+TV
Sbjct: 9 WDYEDVTV 16


>sp|FLAB3_METVO|FLAGELLIN B3|Methanococcus voltae

Query: 1 AWRFDDMT 8
AW F+D T
Sbjct: 144 AWPFEDPT 151


>sp|BGAL_SULAC|BETA-GALACTOSIDASE acidocaldarius (strain ATCC 33909

Query: 1 AWRFDDM 7
AW+ DD+
Sbjct: 194 AWKLDDL 200


>sp|ASSY_HALWD|ARGININOSUCCINATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 WRFDDMTV 9
WR D+TV
Sbjct: 129 WRNSDLTV 136




91|SequenceR|460|451|NSQSLAWRFD

>sp|TFE_PYRNV|TRANSCRIPTION factor E|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 QSLAWRFD 10
+S+AW FD
Sbjct: 11 KSVAWEFD 18


>sp|TFE_PYRIL|TRANSCRIPTION factor E|Pyrobaculum islandicum (strain DSM 4184

Query: 3 QSLAWRFD 10
+S+AW FD
Sbjct: 11 KSVAWEFD 18


>sp|TFE_PYRAE|TRANSCRIPTION factor E|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 QSLAWRFD 10
+S+AW FD
Sbjct: 11 KSVAWEFD 18


>sp|TFE_PYRAR|TRANSCRIPTION factor E|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 QSLAWRFD 10
+S+AW FD
Sbjct: 11 KSVAWEFD 18


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NSQSLAWRFD 10
+SQ LA RFD
Sbjct: 190 SSQFLATRFD 199


>sp|BGAL_SACSH|BETA-GALACTOSIDASE shibatae (strain ATCC 51178

Query: 2 SQSLAWRFD 10
S +AW+FD
Sbjct: 187 SAYIAWKFD 195




92|SequenceR|465|456|RLASPNSQSL

>sp|LEUC2_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RLASPNSQ 8
R+ SPN+Q
Sbjct: 348 RMGSPNAQ 355


>sp|TOP6A_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RLASPNSQSL 10
RLA+PN++ L
Sbjct: 284 RLATPNAKFL 293


>sp|LEUC_THEKO|3-ISOPROPYLMALATE dehydratase large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 RLASPNSQ 8
R+ SPNS+
Sbjct: 348 RMGSPNSE 355




93|SequenceR|470|461|EVVTERLASP

>sp|RS12_PYRAE|SMALL ribosomal subunit protein uS12|Pyrobaculum aerophilum (strain ATCC

Query: 1 EVVTERLASP 10
EVV ER+ P
Sbjct: 102 EVVIERIGGP 111


>sp|RS12_PYRAR|SMALL ribosomal subunit protein uS12|Pyrobaculum arsenaticum (strain DSM

Query: 1 EVVTERLASP 10
EVV ER+ P
Sbjct: 102 EVVIERIGGP 111


>sp|RS12_PYRCJ|SMALL ribosomal subunit protein uS12|Pyrobaculum calidifontis (strain DSM

Query: 1 EVVTERLASP 10
EV+ ER+ P
Sbjct: 102 EVIIERIGGP 111


>sp|AROA_METS3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 EVVTERLAS 9
E++TE LAS
Sbjct: 124 EILTESLAS 132


>sp|RS12_PYRIL|SMALL ribosomal subunit protein uS12|Pyrobaculum islandicum (strain DSM

Query: 1 EVVTERLASP 10
EV+ ER+ P
Sbjct: 102 EVIIERIGGP 111


>sp|RL10_THEON|LARGE ribosomal subunit protein uL10|Thermococcus onnurineus (strain NA1)

Query: 1 EVVTERLA 8
EV+TE+LA
Sbjct: 166 EVITEQLA 173




94|SequenceR|475|466|TVQPVEVVTE

>sp|ISCS2_ARCFU|CYSTEINE desulfurase IscS 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TVQPVEVVTE 10
T+QPVE ++E
Sbjct: 153 TIQPVEEISE 162


>sp|DTDA_DESA1|D-AMINOACYL-TRNA deacylase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 VQPVEVVTE 10
V+PVEV+ E
Sbjct: 238 VKPVEVIVE 246


>sp|AMPPA_NATPD|AMP phosphorylase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 TVQPVEVVTE 10
TV+P+++ TE
Sbjct: 4 TVEPIDIGTE 13




95|SequenceR|480|471|GIDEWTVQPV

>sp|RS4E_METS3|SMALL ribosomal subunit protein eS4|Methanobrevibacter smithii (strain

Query: 3 DEWTVQP 9
D WTV+P
Sbjct: 26 DTWTVKP 32


>sp|GCSPB_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 GIDEWTVQP 9
G+D +T+QP
Sbjct: 129 GMDRFTLQP 137


>sp|GCSPB_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 1 GIDEWTVQP 9
G+D +T+QP
Sbjct: 129 GMDRFTLQP 137


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 GIDEWTVQP 9
G+D +T+QP
Sbjct: 129 GMDRFTLQP 137


>sp|Y501_PYRAB|UPF0235 protein PYRAB05010|Pyrococcus abyssi (strain GE5 /

Query: 1 GIDEW 5
GIDEW
Sbjct: 26 GIDEW 30


>sp|GCSPB_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 GIDEWTVQP 9
G+D +T+QP
Sbjct: 129 GMDRFTLQP 137


>sp|GCSPB_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 1 GIDEWTVQP 9
G+D +T+QP
Sbjct: 129 GMDRFTLQP 137


>sp|GCSPB_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 1 GIDEWTVQP 9
G+D +T+QP
Sbjct: 129 GMDRFTLQP 137


>sp|ACDG_METJA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanocaldococcus

Query: 1 GIDEWTVQPV 10
G+D W + PV
Sbjct: 325 GMDIWELMPV 334


>sp|PRIS_PYRFU|DNA primase small subunit PriS|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IDEWTVQ 8
+DEW +Q
Sbjct: 155 LDEWALQ 161


>sp|Y1489_METJA|MCM-LIKE protein MJ1489|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GIDEWTVQP 9
G D W ++P
Sbjct: 373 GEDTWVIKP 381


>sp|Y641_THEON|UPF0235 protein TON_0641|Thermococcus onnurineus (strain NA1)

Query: 1 GIDEW 5
G+DEW
Sbjct: 28 GVDEW 32


>sp|NIFD_METBA|NITROGENASE molybdenum-iron protein alpha chain|Methanosarcina barkeri

Query: 1 GIDEWTVQPV 10
G D W V+P+
Sbjct: 228 GGDLWEVKPI 237


>sp|DTDA_DESA1|D-AMINOACYL-TRNA deacylase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 GIDEW 5
G+DEW
Sbjct: 157 GLDEW 161


>sp|ACDD2_METTE|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 2 IDEWTVQ 8
I+EWT Q
Sbjct: 105 IEEWTTQ 111


>sp|Y273_METKA|UPF0235 protein MK0273|Methanopyrus kandleri (strain AV19 /

Query: 1 GIDEW 5
G+DEW
Sbjct: 29 GVDEW 33


>sp|PANE_THEKO|2-DEHYDROPANTOATE 2-reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GIDEWTVQP 9
G +E+TV+P
Sbjct: 47 GAEEFTVKP 55




96|SequenceR|485|476|VDELGGIDEW

>sp|RFCL_METM6|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C6 /

Query: 2 DELGGIDEW 10
+ELG I+EW
Sbjct: 253 EELGTIEEW 261


>sp|RFCL_METM7|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C7 /

Query: 2 DELGGIDEW 10
+ELG I+EW
Sbjct: 253 EELGTIEEW 261


>sp|ACEB_HALVD|MALATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 VDELGGIDEW 10
+ E+GGID+W
Sbjct: 121 IPEVGGIDDW 130


>sp|RPO1C_METMP|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain DSM

Query: 1 VDELGGIDE 9
VDELGG+ E
Sbjct: 349 VDELGGVVE 357


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DELGGIDE 9
D++GG+DE
Sbjct: 159 DQIGGLDE 166


>sp|RPO1C_METM6|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C6 /

Query: 1 VDELGGIDE 9
VDELGG+ E
Sbjct: 349 VDELGGVVE 357


>sp|RPO1C_METM5|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C5 /

Query: 1 VDELGGIDE 9
VDELGG+ E
Sbjct: 349 VDELGGVVE 357


>sp|RPO1C_METM7|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C7 /

Query: 1 VDELGGIDE 9
VDELGG+ E
Sbjct: 349 VDELGGVVE 357


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DELGGIDE 9
D++GG+DE
Sbjct: 159 DQIGGLDE 166


>sp|RFCL_METVS|REPLICATION factor C large subunit|Methanococcus vannielii (strain ATCC 35089

Query: 2 DELGGIDEW 10
+ELG + EW
Sbjct: 253 EELGTVSEW 261


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 2 DELGGIDE 9
D++GGIDE
Sbjct: 152 DDIGGIDE 159


>sp|Y1603_METM6|UPF0235 protein MmarC6_1603|Methanococcus maripaludis (strain C6 /

Query: 2 DELGGIDEW 10
+E+G I+EW
Sbjct: 26 NEIGKINEW 34


>sp|Y1055_METMP|UPF0235 protein MMP1055|Methanococcus maripaludis (strain DSM 14266

Query: 2 DELGGIDEW 10
+E+G I+EW
Sbjct: 26 NEIGKINEW 34


>sp|Y538_METM5|UPF0235 protein MmarC5_0538|Methanococcus maripaludis (strain C5 /

Query: 2 DELGGIDEW 10
+E+G I+EW
Sbjct: 26 NEIGKINEW 34


>sp|Y309_METM7|UPF0235 protein MmarC7_0309|Methanococcus maripaludis (strain C7 /

Query: 2 DELGGIDEW 10
+E+G I+EW
Sbjct: 26 NEIGKINEW 34


>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 2 DELGGIDEW 10
++LG I EW
Sbjct: 253 EDLGTIQEW 261


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 DELGGIDEW 10
+EL +DEW
Sbjct: 645 EELAAVDEW 653


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 2 DELGGIDE 9
D++GG+DE
Sbjct: 179 DDIGGLDE 186


>sp|Y841_META3|UPF0235 protein Maeo_0841|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 DELGGIDEW 10
+E+G I+EW
Sbjct: 28 NEIGEINEW 36


>sp|HISX_PYRAE|HISTIDINOL dehydrogenase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VDELGGIDE 9
V ++GGIDE
Sbjct: 257 VKKVGGIDE 265


>sp|RNH2_THESM|RIBONUCLEASE HII|Thermococcus sibiricus (strain DSM 12597

Query: 3 ELGGIDE 9
+LGGIDE
Sbjct: 2 KLGGIDE 8


>sp|AROD_METMJ|3-DEHYDROQUINATE dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VDELGGIDE 9
V ELG IDE
Sbjct: 116 VPELGRIDE 124


>sp|Y1488_ARCFU|UNCHARACTERIZED protein AF_1488|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VDELGGID 8
+DE+GG++
Sbjct: 158 IDEIGGVE 165


>sp|LYSJ_SULTO|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfurisphaera

Query: 1 VDELGGIDE 9
+DEL IDE
Sbjct: 158 IDELKNIDE 166


>sp|Y1544_METJA|UNCHARACTERIZED protein MJ1544|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DELGGIDEW 10
DE+ +D W
Sbjct: 116 DEIQSVDNW 124


>sp|NCPP_METTH|PROBABLE inosine/xanthosine triphosphatase|Methanothermobacter

Query: 1 VDELGGIDEW 10
+DEL G+DE
Sbjct: 132 MDELTGVDEL 141


>sp|RNH2_PYRFU|RIBONUCLEASE HII|Pyrococcus furiosus (strain ATCC 43587

Query: 3 ELGGIDE 9
++GGIDE
Sbjct: 2 KIGGIDE 8


>sp|RFRNP_METJA|RNA-FREE ribonuclease P|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 GGIDEW 10
GGI++W
Sbjct: 195 GGIEKW 200


>sp|RS17_METJA|SMALL ribosomal subunit protein uS17|Methanocaldococcus jannaschii

Query: 1 VDELGGIDE 9
V++LG IDE
Sbjct: 104 VEKLGRIDE 112


>sp|SFSA_PYRNV|SUGAR fermentation stimulation protein homolog|Pyrobaculum neutrophilum

Query: 1 VDELGGIDE 9
V E+GG DE
Sbjct: 27 VAEIGGADE 35


>sp|PSB_METTH|PROTEASOME subunit beta|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 LGGIDE 9
LGG+DE
Sbjct: 110 LGGVDE 115


>sp|RFCL_METKA|REPLICATION factor C large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 VDELGGID 8
VDE+ GID
Sbjct: 121 VDEVDGID 128


>sp|AROA_ARCFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ELGGIDEW 10
E+GG EW
Sbjct: 267 EMGGSVEW 274


>sp|AMASY_HALMA|APPARENT malate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VDELGGIDEW 10
+ E+G ID+W
Sbjct: 122 IPEVGDIDDW 131


>sp|GLME_HALMA|GLUTAMATE mutase epsilon subunit|Haloarcula marismortui (strain ATCC 43049

Query: 3 ELGGIDE 9
+LGGIDE
Sbjct: 352 DLGGIDE 358




97|SequenceR|490|481|QLERKVDELG

>sp|SPH1_HALSI|SMC-LIKE protein Sph1|Halobacterium salinarum (Halobacterium halobium)

Query: 1 QLERKVDE 8
+LERKVDE
Sbjct: 195 ELERKVDE 202


>sp|SPH1_HALSA|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 700922

Query: 1 QLERKVDE 8
+LERKVDE
Sbjct: 195 ELERKVDE 202


>sp|SPH1_HALS3|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 29341

Query: 1 QLERKVDE 8
+LERKVDE
Sbjct: 195 ELERKVDE 202


>sp|AKSA_METTH|HOMOCITRATE synthase AksA|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 QLERKVDELG 10
++ RK+DELG
Sbjct: 45 EIARKLDELG 54


>sp|SYFB_SACI2|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 LERKVDELG 10
LERK+ ELG
Sbjct: 360 LERKIRELG 368


>sp|SYFB_SACI6|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LERKVDELG 10
LERK+ ELG
Sbjct: 360 LERKIRELG 368


>sp|SYFB_SACI4|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LERKVDELG 10
LERK+ ELG
Sbjct: 360 LERKIRELG 368


>sp|SYFB_SACI3|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.16.27)

Query: 2 LERKVDELG 10
LERK+ ELG
Sbjct: 360 LERKIRELG 368


>sp|SYFB_SACI7|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 LERKVDELG 10
LERK+ ELG
Sbjct: 360 LERKIRELG 368


>sp|SYFB_SACI1|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 LERKVDELG 10
LERK+ ELG
Sbjct: 360 LERKIRELG 368


>sp|AKSA_METJA|HOMOCITRATE synthase AksA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QLERKVDELG 10
++ RK+DELG
Sbjct: 57 EIARKLDELG 66


>sp|KDGA_SACSO|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Saccharolobus solfataricus (Sulfolobus solfataricus)

Query: 2 LERKVDE 8
+ERK+DE
Sbjct: 215 MERKIDE 221


>sp|SUCC_HALMA|SUCCINATE--COA ligase [ADP-forming] subunit beta|Haloarcula marismortui (strain

Query: 1 QLERKVDELG 10
+LE+K DE G
Sbjct: 233 ELEQKADEYG 242


>sp|Y2213_SACS2|UPF0284 protein SSO2213|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LERKVDEL 9
L RK+DEL
Sbjct: 328 LVRKIDEL 335


>sp|NCSA_HALVD|TRNA 2-thiolation protein NcsA|Haloferax volcanii (strain ATCC 29605

Query: 2 LERKVDELG 10
LER DELG
Sbjct: 154 LERFADELG 162


>sp|FAU1_STAMF|PROBABLE ribonuclease FAU-1|Staphylothermus marinus (strain ATCC 43588

Query: 1 QLERKVDEL 9
++ER++DEL
Sbjct: 209 EIEREIDEL 217


>sp|KDGA_SACS2|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LERKVDE 8
+ERK+DE
Sbjct: 229 MERKIDE 235


>sp|Y030_SACI4|UPF0284 protein M1425_0030|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LERKVDEL 9
L RK+DEL
Sbjct: 328 LVRKIDEL 335


>sp|Y030_SACI3|UPF0284 protein M1627_0030|Saccharolobus islandicus (strain M.16.27)

Query: 2 LERKVDEL 9
L RK+DEL
Sbjct: 328 LVRKIDEL 335


>sp|Y030_SACI6|UPF0284 protein M164_0030|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LERKVDEL 9
L RK+DEL
Sbjct: 328 LVRKIDEL 335


>sp|COMC_METJA|L-SULFOLACTATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QLERKVDEL 9
+ +RKVDEL
Sbjct: 277 EFKRKVDEL 285


>sp|Y688_THEON|UPF0284 protein TON_0688|Thermococcus onnurineus (strain NA1)

Query: 2 LERKVDEL 9
+ RKVDEL
Sbjct: 318 VSRKVDEL 325


>sp|Y030_SACI7|UPF0284 protein YG5714_0030|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 LERKVDEL 9
L RK+DEL
Sbjct: 328 LVRKIDEL 335


>sp|Y030_SACI2|UPF0284 protein LS215_0030|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 LERKVDEL 9
L RK+DEL
Sbjct: 328 LVRKIDEL 335


>sp|Y030_SACI1|UPF0284 protein YN1551_0030|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 LERKVDEL 9
L RK+DEL
Sbjct: 328 LVRKIDEL 335


>sp|CIMA_METKA|PUTATIVE (R)-citramalate synthase CimA|Methanopyrus kandleri (strain AV19

Query: 1 QLERKVDELG 10
++ RK+DE+G
Sbjct: 39 RIARKLDEIG 48


>sp|CIMA_METJA|(R)-CITRAMALATE synthase CimA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QLERKVDELG 10
++ +K+DELG
Sbjct: 28 EIAKKLDELG 37


>sp|LEU1_METKA|PROBABLE 2-isopropylmalate synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 QLERKVDELG 10
++ RK+DE G
Sbjct: 30 EIARKLDEFG 39


>sp|SYK_SULAC|LYSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QLERKVDELG 10
QL+ +V+ELG
Sbjct: 88 QLQLRVNELG 97


>sp|RAD50_SACS2|DNA double-strand break repair Rad50|Saccharolobus solfataricus (strain

Query: 1 QLERKVDEL 9
+LERK++EL
Sbjct: 334 ELERKLEEL 342




98|SequenceR|495|486|YQVLEQLERK

>sp|CDC62_ARCFU|ORC1-TYPE DNA replication protein 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YQVLEQLER 9
Y +LE+LER
Sbjct: 333 YNILEKLER 341


>sp|THIC_HALMA|PHOSPHOMETHYLPYRIMIDINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 QVLEQLERK 10
QV EQ+ER+
Sbjct: 268 QVAEQVERQ 276


>sp|RNP2_METMP|RIBONUCLEASE P protein component 2|Methanococcus maripaludis (strain DSM 14266

Query: 1 YQVLEQLERK 10
Y+V+++L+RK
Sbjct: 117 YKVIQKLKRK 126


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 YQVLEQLERK 10
++ LE+LERK
Sbjct: 34 FKRLEELERK 43


>sp|AMPP2_ARCFU|AMP phosphorylase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QVLEQLERK 10
+VLE +ERK
Sbjct: 337 EVLEVMERK 345


>sp|PORC_PYRAB|PYRUVATE/KETOISOVALERATE oxidoreductases common subunit gamma|Pyrococcus abyssi (strain GE5

Query: 2 QVLEQLERK 10
+VLE+L+RK
Sbjct: 103 EVLEKLKRK 111


>sp|SYW_METKA|TRYPTOPHAN--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 QVLEQLERK 10
++LE+LER+
Sbjct: 341 EILEELERR 349


>sp|IF2P_PYRAB|PROBABLE translation initiation factor IF-2|Pyrococcus abyssi (strain GE5 /

Query: 2 QVLEQLER 9
++LEQ+ER
Sbjct: 735 EILEQIER 742


>sp|LYSJ_PYRFU|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 YQVLEQLER 9
Y++LE+LE+
Sbjct: 69 YEMLEELEK 77




99|SequenceR|500|491|PHEVPYQVLE

>sp|RS5_NANEQ|SMALL ribosomal subunit protein uS5|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PHEVPYQV 8
PH +PYQV
Sbjct: 138 PHSIPYQV 145


>sp|RS5_METMA|SMALL ribosomal subunit protein uS5|Methanosarcina mazei (strain ATCC

Query: 1 PHEVPYQV 8
PH VPY+V
Sbjct: 125 PHTVPYEV 132


>sp|RS5_METBF|SMALL ribosomal subunit protein uS5|Methanosarcina barkeri (strain Fusaro

Query: 1 PHEVPYQV 8
PH VPY+V
Sbjct: 125 PHTVPYEV 132


>sp|RS5_METAC|SMALL ribosomal subunit protein uS5|Methanosarcina acetivorans (strain

Query: 1 PHEVPYQV 8
PH VPY+V
Sbjct: 125 PHTVPYEV 132


>sp|PDXS_SULTO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Sulfurisphaera tokodaii (strain

Query: 2 HEVPYQVLE 10
++VPYQ++E
Sbjct: 209 YQVPYQIVE 217


>sp|NQOR_METBF|NAD(P)H dehydrogenase (quinone)|Methanosarcina barkeri (strain Fusaro /

Query: 1 PHEVPYQVLE 10
P +PY+VLE
Sbjct: 40 PETLPYEVLE 49


>sp|RIBB_METTH|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanothermobacter thermautotrophicus

Query: 1 PHEVPY 6
PH++PY
Sbjct: 93 PHDIPY 98


>sp|APGM_SULTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PHEVPYQVLE 10
PHEV +VLE
Sbjct: 169 PHEVNKKVLE 178


>sp|MTAP_PYRFU|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PHEVPYQ 7
PHEVPY+
Sbjct: 59 PHEVPYR 65


>sp|MTAP_PYRAB|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 1 PHEVPYQ 7
PHEVPY+
Sbjct: 59 PHEVPYR 65


>sp|RS5_METJA|SMALL ribosomal subunit protein uS5|Methanocaldococcus jannaschii (strain

Query: 1 PHEVPYQ 7
PH +PY+
Sbjct: 126 PHSIPYK 132


>sp|MTAP_THEKO|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PHEVPYQ 7
PHEVPY+
Sbjct: 59 PHEVPYR 65


>sp|PDXS_SACS2|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus solfataricus

Query: 2 HEVPYQVLE 10
++VPYQ++E
Sbjct: 231 YQVPYQIVE 239


>sp|TET_PYRHO|TETRAHEDRAL aminopeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HEVPYQV 8
HE+PYQ+
Sbjct: 284 HEIPYQL 290


>sp|RS5_PYRHO|SMALL ribosomal subunit protein uS5|Pyrococcus horikoshii (strain ATCC

Query: 1 PHEVPYQV 8
PH VP+ V
Sbjct: 138 PHSVPFAV 145


>sp|RS5_PYRAB|SMALL ribosomal subunit protein uS5|Pyrococcus abyssi (strain GE5 /

Query: 1 PHEVPYQV 8
PH VP+ V
Sbjct: 138 PHSVPFTV 145


>sp|RS5_PYRFU|SMALL ribosomal subunit protein uS5|Pyrococcus furiosus (strain ATCC

Query: 1 PHEVPYQV 8
PH VP+ V
Sbjct: 138 PHSVPFAV 145


>sp|RS5_THEPD|SMALL ribosomal subunit protein uS5|Thermofilum pendens (strain DSM 2475

Query: 1 PHEVPYQV 8
PH +P++V
Sbjct: 123 PHSIPFKV 130


>sp|RS5_SACI1|SMALL ribosomal subunit protein uS5|Saccharolobus islandicus (strain

Query: 1 PHEVPYQVL 9
PH +P++V+
Sbjct: 131 PHSLPFKVV 139


>sp|CPGS_METTH|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermobacter

Query: 1 PHEVPYQVL 9
PH +PY+++
Sbjct: 71 PHRIPYKLI 79


>sp|PDXS_SACI7|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 2 HEVPYQVLE 10
++VPYQ++E
Sbjct: 231 YQVPYQLVE 239


>sp|PDXS_SACI6|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 2 HEVPYQVLE 10
++VPYQ++E
Sbjct: 231 YQVPYQLVE 239


>sp|PDXS_SACI4|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 2 HEVPYQVLE 10
++VPYQ++E
Sbjct: 231 YQVPYQLVE 239


>sp|PDXS_SACI3|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 2 HEVPYQVLE 10
++VPYQ++E
Sbjct: 231 YQVPYQLVE 239


>sp|PDXS_SACI2|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 2 HEVPYQVLE 10
++VPYQ++E
Sbjct: 231 YQVPYQLVE 239


>sp|RS5_HYPBU|SMALL ribosomal subunit protein uS5|Hyperthermus butylicus (strain DSM

Query: 1 PHEVPYQV 8
PH VP+ V
Sbjct: 131 PHSVPFTV 138


>sp|PDXS_SACI1|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Saccharolobus islandicus (strain

Query: 2 HEVPYQVLE 10
++VPYQ++E
Sbjct: 231 YQVPYQLVE 239


>sp|RS5_METKA|SMALL ribosomal subunit protein uS5|Methanopyrus kandleri (strain AV19 /

Query: 1 PHEVPYQV 8
PH +P+++
Sbjct: 128 PHSIPFEI 135


>sp|RS5_SACS2|SMALL ribosomal subunit protein uS5|Saccharolobus solfataricus (strain

Query: 1 PHEVPYQVL 9
PH +P++V+
Sbjct: 131 PHSLPFKVV 139


>sp|RS5_STAMF|SMALL ribosomal subunit protein uS5|Staphylothermus marinus (strain ATCC

Query: 1 PHEVPYQV 8
PH +P+ V
Sbjct: 132 PHSIPFTV 139


>sp|RS5_IGNH4|SMALL ribosomal subunit protein uS5|Ignicoccus hospitalis (strain KIN4/I

Query: 1 PHEVPYQV 8
PH VP+ V
Sbjct: 128 PHSVPFTV 135


>sp|RS5_PYRCJ|SMALL ribosomal subunit protein uS5|Pyrobaculum calidifontis (strain DSM

Query: 1 PHEVPYQV 8
PH VP+ V
Sbjct: 127 PHSVPFVV 134


>sp|RS5_PYRAE|SMALL ribosomal subunit protein uS5|Pyrobaculum aerophilum (strain ATCC

Query: 1 PHEVPYQV 8
PH VP+ V
Sbjct: 143 PHSVPFVV 150


>sp|PDXS_SULAC|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Sulfolobus acidocaldarius

Query: 2 HEVPYQVLE 10
++VPYQ++E
Sbjct: 229 YQVPYQLVE 237


>sp|ILVD_METST|DIHYDROXY-ACID dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 HEVPY 6
HEVPY
Sbjct: 296 HEVPY 300


>sp|RS5_PYRIL|SMALL ribosomal subunit protein uS5|Pyrobaculum islandicum (strain DSM

Query: 1 PHEVPYQV 8
PH VP+ V
Sbjct: 127 PHSVPFVV 134


>sp|RS5_PYRAR|SMALL ribosomal subunit protein uS5|Pyrobaculum arsenaticum (strain DSM

Query: 1 PHEVPYQV 8
PH VP+ V
Sbjct: 127 PHSVPFVV 134


>sp|RS5_THEKO|SMALL ribosomal subunit protein uS5|Thermococcus kodakarensis (strain

Query: 1 PHEVPYQV 8
PH +P+ V
Sbjct: 137 PHSIPFAV 144


>sp|MTAP_PYRHO|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PHEVPYQ 7
PH+VPY+
Sbjct: 59 PHQVPYR 65


>sp|RS5_METTP|SMALL ribosomal subunit protein uS5|Methanothrix thermoacetophila (strain

Query: 2 HEVPYQV 8
H VPY+V
Sbjct: 129 HTVPYKV 135


>sp|AATC_THEON|A-TYPE ATP synthase subunit C|Thermococcus onnurineus (strain NA1)

Query: 1 PHEVPYQVL 9
P+E PYQ L
Sbjct: 177 PYEEPYQKL 185


>sp|AATC_THEKO|A-TYPE ATP synthase subunit C|Thermococcus kodakarensis (strain ATCC

Query: 1 PHEVPYQVL 9
P+E PYQ L
Sbjct: 176 PYEGPYQEL 184


>sp|MTAP_PYRAE|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PHEVPYQ 7
PH++PY+
Sbjct: 79 PHKIPYR 85


>sp|SYS_HALLT|SERINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 EVPYQVLE 10
E+PY++LE
Sbjct: 324 ELPYRILE 331


>sp|SUMT_METJA|UROPORPHYRINOGEN-III C-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 HEVPYQVL 9
H +PY+V+
Sbjct: 107 HNIPYEVI 114


>sp|RNP2_META3|RIBONUCLEASE P protein component 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PHEVPYQVLE 10
PHE Y+V++
Sbjct: 112 PHEKYYKVIQ 121


>sp|KAE1B_HALMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 HEVPYQV 8
HE+PY V
Sbjct: 201 HELPYVV 207


>sp|PURL_PYRAR|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 HEVPYQVL 9
+EVPY V+
Sbjct: 318 YEVPYSVV 325


>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HEVPYQVL 9
HE PY VL
Sbjct: 465 HEGPYGVL 472


>sp|CPGS_METFV|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermus fervidus (strain

Query: 1 PHEVPYQVLE 10
P ++PY V++
Sbjct: 69 PKKIPYDVIK 78


>sp|SYS_HALSA|SERINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 EVPYQVLE 10
++PY+VLE
Sbjct: 324 DLPYRVLE 331


>sp|SYS_HALS3|SERINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 EVPYQVLE 10
++PY+VLE
Sbjct: 324 DLPYRVLE 331


>sp|RISB_META3|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 EVPYQVL 9
EVPY+V+
Sbjct: 33 EVPYKVM 39




100|SequenceR|505|496|KLFKDPHEVP

>sp|Y3515_METJA|UNCHARACTERIZED ATP-binding protein MJECL15|Methanocaldococcus jannaschii (strain

Query: 1 KLFKDPHEVP 10
KLFKD +E+P
Sbjct: 314 KLFKDNYELP 323


>sp|Y074_METJA|UNCHARACTERIZED ATP-binding protein MJ0074|Methanocaldococcus jannaschii (strain

Query: 1 KLFKDPHEVP 10
+LFKD +E+P
Sbjct: 307 RLFKDKYEIP 316


>sp|GVPD1_HALSA|PROTEIN GvpD1|Halobacterium salinarum (strain ATCC 700922

Query: 2 LFKDPHEVP 10
LF+DP E+P
Sbjct: 93 LFQDPFELP 101


>sp|Y801_METJA|UNCHARACTERIZED ATP-binding protein MJ0801|Methanocaldococcus jannaschii (strain

Query: 1 KLFKDPHEVP 10
KLFKD +EV
Sbjct: 328 KLFKDEYEVS 337


>sp|APE1_SULTO|PROBABLE aminopeptidase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 KDPHEV 9
KDPHE+
Sbjct: 342 KDPHEI 347


>sp|APE1_SACS2|PROBABLE aminopeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 KDPHEV 9
KDPHE+
Sbjct: 343 KDPHEI 348


>sp|KDGK_SACS2|2-DEHYDRO-3-DEOXYGLUCONOKINASE/2-DEHYDRO-3-DEOXYGALACTONOKINASE solfataricus (strain ATCC 35092

Query: 1 KLFKDPHEVP 10
K FKD ++VP
Sbjct: 240 KAFKDAYKVP 249


>sp|FWDB_METMP|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanococcus

Query: 5 DPHEVP 10
DPHE P
Sbjct: 369 DPHETP 374


>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 2 LFKDPHEV 9
L +DPHE+
Sbjct: 169 LGRDPHEI 176


>sp|CAR_HALS3|TRANSDUCER protein Car|Halobacterium salinarum (strain ATCC 29341

Query: 4 KDPHEVP 10
++PH+VP
Sbjct: 121 EEPHDVP 127


>sp|FWDB_METJA|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanocaldococcus

Query: 5 DPHEVP 10
DPHE P
Sbjct: 370 DPHETP 375


>sp|UVRC_METAC|UVRABC system protein C|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KLFKDPHEVP 10
+L +D HE+P
Sbjct: 423 RLLEDKHEMP 432


>sp|UVRC_METMA|UVRABC system protein C|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KLFKDPHEVP 10
+L +D HE+P
Sbjct: 429 RLLEDKHEMP 438


>sp|RADB_METS3|DNA repair and recombination protein|Methanobrevibacter smithii

Query: 3 FKDPHEVP 10
F+D H++P
Sbjct: 7 FEDNHKIP 14


>sp|NRPR_METJA|GLOBAL nitrogen regulator NrpR|Methanocaldococcus jannaschii (strain ATCC

Query: 5 DPHEV 9
DPHEV
Sbjct: 439 DPHEV 443


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 KLFKDPHEV 9
+LF DP EV
Sbjct: 379 RLFDDPGEV 387


>sp|RS5_HYPBU|SMALL ribosomal subunit protein uS5|Hyperthermus butylicus (strain DSM

Query: 2 LFKDPHEVP 10
L +PH VP
Sbjct: 127 LCSEPHSVP 135


>sp|Y420_METJA|UNCHARACTERIZED protein MJ0420|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LFKDPHEV 9
LFK PH +
Sbjct: 290 LFKYPHNI 297


>sp|APGM_METS5|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Metallosphaera sedula (strain ATCC 51363

Query: 5 DPHEV 9
DPHEV
Sbjct: 168 DPHEV 172


>sp|TDXH2_SULME|PEROXIREDOXIN 2|Sulfuracidifex metallicus (Sulfolobus metallicus)

Query: 2 LFKDPHEVP 10
LFKD +E+P
Sbjct: 201 LFKDYNELP 209


>sp|TRPF_PYRAR|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 KLFKDPHE 8
+L K PHE
Sbjct: 117 RLLKTPHE 124


>sp|NRPR_METMP|GLOBAL nitrogen regulator NrpR|Methanococcus maripaludis (strain DSM 14266

Query: 5 DPHEV 9
DPHEV
Sbjct: 433 DPHEV 437


>sp|Y147_METJA|UNCHARACTERIZED ATP-binding protein MJ0147|Methanocaldococcus jannaschii (strain

Query: 1 KLFKDPHEVP 10
KLFK+ +EV
Sbjct: 317 KLFKENYEVS 326


>sp|CPGS_METTH|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermobacter

Query: 5 DPHEVP 10
DPH +P
Sbjct: 70 DPHRIP 75


>sp|TF2B_METJA|TRANSCRIPTION initiation factor IIB|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LFKDPHEV 9
+FK P+E+
Sbjct: 315 IFKSPYEI 322


>sp|APGM_SULTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 DPHEV 9
DPHEV
Sbjct: 168 DPHEV 172


>sp|FBPAP_SULTO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KLFKDPHEVP 10
K+F DP P
Sbjct: 144 KMFADPFNTP 153


>sp|TSR3_METJA|16S rRNA aminocarboxypropyltransferase|Methanocaldococcus jannaschii

Query: 2 LFKDPHEVP 10
L K+P++VP
Sbjct: 33 LLKNPYKVP 41


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KLFKDPHE 8
+LF DP E
Sbjct: 25 RLFNDPEE 32




101|SequenceR|510|501|PTMGFKLFKD

>sp|FAEHP_METST|BIFUNCTIONAL enzyme Fae/Hps|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PTMGFKLFK 9
P MGFK K
Sbjct: 163 PIMGFKAMK 171


>sp|ALAXL_PYRHO|ALANYL-TRNA editing protein AlaX-L|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TMGFKLFKD 10
T GF +F+D
Sbjct: 122 TTGFNIFRD 130


>sp|GCST_THEKO|PROBABLE aminomethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 PTMGFKLFKD 10
P G+K++KD
Sbjct: 323 PREGYKVYKD 332


>sp|PUS10_THEAM|TRNA pseudouridine synthase Pus10|Thermosphaera aggregans (strain DSM

Query: 3 MGFKLFKD 10
+GFKL+ D
Sbjct: 57 LGFKLYDD 64


>sp|Y557_PICTO|PUTATIVE HTH-type transcriptional regulatory protein|Picrophilus torridus

Query: 1 PTMGFKLFKD 10
P M FK F D
Sbjct: 98 PIMSFKTFID 107


>sp|PYRDB_PYRHO|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus horikoshii (strain

Query: 4 GFKLFKD 10
GFK+FK+
Sbjct: 270 GFKVFKE 276




102|SequenceR|515|506|LVGKSPTMGF

>sp|RPO5_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo5|Thermoplasma acidophilum (strain ATCC

Query: 1 LVGKSPTMG 9
+V KSPTMG
Sbjct: 65 IVRKSPTMG 73


>sp|ALBA_THEVO|DNA/RNA-BINDING protein Alba|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LVGKSPTMGF 10
VGK PTM +
Sbjct: 8 FVGKKPTMNY 17


>sp|ALBA_THEAC|DNA/RNA-BINDING protein Alba|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LVGKSPTMGF 10
VGK PTM +
Sbjct: 8 FVGKKPTMNY 17


>sp|ALBA_PICTO|DNA/RNA-BINDING protein Alba|Picrophilus torridus (strain ATCC 700027

Query: 1 LVGKSPTMGF 10
VGK PTM +
Sbjct: 8 FVGKKPTMNY 17


>sp|ALBA1_SULTO|DNA/RNA-BINDING protein Alba 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LVGKSPTMGF 10
LVGK P M +
Sbjct: 14 LVGKKPVMNY 23


>sp|ALBA_SULAC|DNA/RNA-BINDING protein Alba|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LVGKSPTMGF 10
LVGK P M +
Sbjct: 12 LVGKKPVMNY 21


>sp|ALBA_METJA|DNA/RNA-BINDING protein Alba|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LVGKSPTMGF 10
L+GK P M +
Sbjct: 6 LIGKKPVMNY 15


>sp|Y785_METJA|UNCHARACTERIZED protein MJ0785|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VGKSPTMGF 10
VG+ P MGF
Sbjct: 256 VGEIPIMGF 264


>sp|ALBA1_AERPE|DNA/RNA-BINDING protein Alba 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 LVGKSPTMGF 10
LVG+ PT+ +
Sbjct: 12 LVGRKPTINY 21


>sp|ALBA1_SACSH|DNA/RNA-BINDING protein Alba 1|Saccharolobus shibatae (strain ATCC 51178

Query: 1 LVGKSPTMGF 10
L+GK P M +
Sbjct: 13 LIGKKPVMNY 22


>sp|ALBA1_SACS2|DNA/RNA-BINDING protein Alba 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LVGKSPTMGF 10
L+GK P M +
Sbjct: 13 LIGKKPVMNY 22


>sp|ALBA1_SACI5|DNA/RNA-BINDING protein Alba 1|Saccharolobus islandicus (strain REY15A)

Query: 1 LVGKSPTMGF 10
L+GK P M +
Sbjct: 13 LIGKKPVMNY 22


>sp|ALBA_METS5|DNA/RNA-BINDING protein Alba|Metallosphaera sedula (strain ATCC 51363

Query: 1 LVGKSPTMGF 10
LVGK P M +
Sbjct: 13 LVGKKPVMNY 22


>sp|ALBA_PYRCJ|DNA/RNA-BINDING protein Alba|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LVGKSPTMGF 10
LVGK PT +
Sbjct: 8 LVGKKPTTNY 17


>sp|IF2P_METLZ|PROBABLE translation initiation factor IF-2|Methanocorpusculum labreanum

Query: 1 LVGKSPTMGF 10
LVGK MGF
Sbjct: 167 LVGKLSDMGF 176


>sp|ALBA_IGNH4|DNA/RNA-BINDING protein Alba|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 VGKSPTMGF 10
VGK P M +
Sbjct: 13 VGKKPVMNY 21


>sp|FTSZ2_HALVD|CELL division protein FtsZ 2|Haloferax volcanii (strain ATCC 29605

Query: 1 LVGKSPTMGF 10
LVGKS T G
Sbjct: 80 LVGKSLTQGL 89


>sp|PMDHL_METJA|PHOSPHOMEVALONATE dehydratase large subunit|Methanocaldococcus jannaschii (strain

Query: 1 LVGKSPTMGF 10
++GK+P G+
Sbjct: 166 IIGKTPYYGY 175


>sp|ALBA_PYRIL|DNA/RNA-BINDING protein Alba|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LVGKSPTMGF 10
LVGK PT +
Sbjct: 8 LVGKKPTTNY 17


>sp|ALBA_PYRAE|DNA/RNA-BINDING protein Alba|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LVGKSPTMGF 10
LVGK PT +
Sbjct: 8 LVGKKPTTNY 17


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 1 LVGKSPTMG 9
LV K PT+G
Sbjct: 174 LVEKEPTIG 182


>sp|RPO5_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo5|Thermoplasma volcanium (strain ATCC

Query: 1 LVGKSPTMG 9
++ SPTMG
Sbjct: 65 IIRNSPTMG 73


>sp|PMDHL_THEKO|PHOSPHOMEVALONATE dehydratase large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 LVGKSPTMGF 10
+VGK+P G
Sbjct: 157 IVGKTPNYGL 166


>sp|HIS5_ARCFU|IMIDAZOLE glycerol phosphate synthase subunit|Archaeoglobus fulgidus (strain

Query: 2 VGKSPTMGF 10
VGK P MG+
Sbjct: 107 VGKVPHMGW 115


>sp|PUR2_METB6|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanoregula boonei (strain DSM 21154

Query: 1 LVGKSPTMG 9
VGK+PT+
Sbjct: 380 FVGKAPTLA 388




103|SequenceR|520|511|PPGYFLVGKS

>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 1 PPGYFLVGKS 10
P GYF++G S
Sbjct: 186 PGGYFIIGGS 195


>sp|Y579_METJA|UNCHARACTERIZED protein MJ0579|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GYFLVGKS 10
GY +VGKS
Sbjct: 130 GYLIVGKS 137


>sp|COABC_THEKO|COENZYME A biosynthesis bifunctional protein|Thermococcus kodakarensis

Query: 2 PGYFLVG 8
PG FLVG
Sbjct: 323 PGVFLVG 329


>sp|RPO2N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 1 PPGYFLVGKS 10
P GYF+V S
Sbjct: 150 PGGYFIVNGS 159


>sp|PGK_METS5|PHOSPHOGLYCERATE kinase|Metallosphaera sedula (strain ATCC 51363

Query: 2 PGYFLVG 8
PGY +VG
Sbjct: 348 PGYLIVG 354


>sp|CDPAS_METKA|CDP-ARCHAEOL synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 PPGYFLVGKS 10
PPG+ LVG +
Sbjct: 140 PPGWVLVGLA 149


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 PPGYFLVGKS 10
P GYF+V S
Sbjct: 146 PGGYFIVNGS 155


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 1 PPGYFLVG 8
PPG LVG
Sbjct: 235 PPGILLVG 242


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 1 PPGYFLVGKS 10
P GYF+V S
Sbjct: 148 PGGYFIVNGS 157


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 1 PPGYFLVGKS 10
P GYF+V S
Sbjct: 154 PGGYFIVNGS 163


>sp|TRPD_IGNH4|ANTHRANILATE phosphoribosyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 PGYFLVGKS 10
PGY LVG S
Sbjct: 187 PGYQLVGVS 195


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 1 PPGYFLVGKS 10
P GYF+V S
Sbjct: 148 PGGYFIVNGS 157


>sp|RPO2N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 1 PPGYFLVGKS 10
P GYF++ S
Sbjct: 155 PGGYFIINGS 164


>sp|RPO2N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 1 PPGYFLVGKS 10
P GYF++ S
Sbjct: 155 PGGYFIINGS 164


>sp|Y3535_METJA|UNCHARACTERIZED protein MJECL35|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PGYFL 6
PGYFL
Sbjct: 405 PGYFL 409


>sp|YC12A_PYRHO|UPF0248 protein PH1212.1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GYFLVGKS 10
GYF VG++
Sbjct: 50 GYFFVGET 57


>sp|GGGPS_SULTO|GERANYLGERANYLGLYCERYL phosphate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PPGYFLVG 8
P GY +VG
Sbjct: 123 PTGYIIVG 130


>sp|RSAMH_METJA|(R)-S-ADENOSYL-L-METHIONINE hydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GYFLVG 8
GY+LVG
Sbjct: 99 GYYLVG 104


>sp|GRPE_NATPD|PROTEIN GrpE|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PGYFLVGK 9
PGY + GK
Sbjct: 180 PGYEMAGK 187


>sp|PURP_PYRAB|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus abyssi (strain GE5 /

Query: 4 YFLVGK 9
YFLVGK
Sbjct: 51 YFLVGK 56


>sp|PCNA_METMJ|DNA polymerase sliding clamp|Methanoculleus marisnigri (strain ATCC

Query: 1 PPGYFLVGKS 10
PPG L GK+
Sbjct: 122 PPGIDLPGKA 131


>sp|RNP2_METLZ|RIBONUCLEASE P protein component 2|Methanocorpusculum labreanum (strain ATCC

Query: 2 PGYFLVGK 9
PGY GK
Sbjct: 118 PGYLCAGK 125


>sp|GGGPS_METS5|GERANYLGERANYLGLYCERYL phosphate synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 PPGYFLVG 8
P GY +VG
Sbjct: 130 PTGYLIVG 137


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 2 PGYFLVGKS 10
P YFLV K+
Sbjct: 591 PEYFLVDKA 599


>sp|Y315_THEKO|UPF0248 protein TK0315|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GYFLVGKS 10
GYF VG++
Sbjct: 50 GYFFVGEA 57


>sp|PGK_SULAC|PHOSPHOGLYCERATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PGYFLVG 8
PGY ++G
Sbjct: 355 PGYVIIG 361


>sp|PGK_SULTO|PHOSPHOGLYCERATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PGYFLVG 8
PGY ++G
Sbjct: 355 PGYVIIG 361


>sp|Y1300_PYRFU|UPF0248 protein PF1300|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GYFLVGKS 10
GYF VG++
Sbjct: 50 GYFFVGET 57


>sp|Y374_METJA|UNCHARACTERIZED protein MJ0374|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PPGYFLVGKS 10
PP F++G S
Sbjct: 39 PPDVFIIGAS 48


>sp|GGGPS_METKA|GERANYLGERANYLGLYCERYL phosphate synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 PPGYFLVGK 9
P GY +VG+
Sbjct: 121 PTGYLIVGE 129




104|SequenceR|525|516|TKGCGPPGYF

>sp|AMPD_AERPE|ANHYDROMEVALONATE phosphate decarboxylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 TKGCGPP 7
T+GCGPP
Sbjct: 35 TQGCGPP 41


>sp|DNLI1_METAC|DNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GCGPPGYF 10
G G PGYF
Sbjct: 205 GAGAPGYF 212


>sp|RS6E_SULAC|SMALL ribosomal subunit protein eS6|Sulfolobus acidocaldarius (strain

Query: 5 GPPGYF 10
GPPGY+
Sbjct: 178 GPPGYY 183


>sp|AMPA_AERPE|PROBABLE cytosol aminopeptidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 TKGCGPPG 8
T GCG PG
Sbjct: 77 TAGCGAPG 84


>sp|RS6E_SULTO|SMALL ribosomal subunit protein eS6|Sulfurisphaera tokodaii (strain DSM

Query: 5 GPPGYF 10
GPPG++
Sbjct: 178 GPPGFY 183


>sp|RS6E_SACS2|SMALL ribosomal subunit protein eS6|Saccharolobus solfataricus (strain

Query: 5 GPPGYF 10
GPPG++
Sbjct: 179 GPPGFY 184


>sp|RS6E_SACI7|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 5 GPPGYF 10
GPPG++
Sbjct: 179 GPPGFY 184


>sp|RS6E_SACI6|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 5 GPPGYF 10
GPPG++
Sbjct: 179 GPPGFY 184


>sp|RS6E_SACI4|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 5 GPPGYF 10
GPPG++
Sbjct: 179 GPPGFY 184


>sp|RS6E_SACI3|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 5 GPPGYF 10
GPPG++
Sbjct: 179 GPPGFY 184


>sp|RS6E_SACI2|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 5 GPPGYF 10
GPPG++
Sbjct: 179 GPPGFY 184


>sp|HIS6_HALSA|IMIDAZOLE glycerol phosphate synthase subunit|Halobacterium salinarum (strain

Query: 1 TKGCGPPG 8
+ GCG PG
Sbjct: 221 SSGCGAPG 228


>sp|HIS6_HALS3|IMIDAZOLE glycerol phosphate synthase subunit|Halobacterium salinarum (strain

Query: 1 TKGCGPPG 8
+ GCG PG
Sbjct: 221 SSGCGAPG 228


>sp|ATGT_METJA|TRNA-GUANINE(15) transglycosylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GCGPPGYF 10
GCG P +F
Sbjct: 229 GCGHPMFF 236


>sp|VAPC3_AERPE|RIBONUCLEASE VapC3|Aeropyrum pernix (strain ATCC 700893

Query: 1 TKGCGPPG 8
T+GC P G
Sbjct: 5 TQGCSPTG 12


>sp|MCM_SACS2|MINICHROMOSOME maintenance protein MCM|Saccharolobus solfataricus (strain ATCC

Query: 4 CGPPGYF 10
CG PG F
Sbjct: 174 CGKPGQF 180


>sp|MCM_SACI5|MINICHROMOSOME maintenance protein MCM|Saccharolobus islandicus (strain REY15A)

Query: 4 CGPPGYF 10
CG PG F
Sbjct: 174 CGKPGQF 180


>sp|RNP2_METLZ|RIBONUCLEASE P protein component 2|Methanocorpusculum labreanum (strain ATCC

Query: 1 TKGCGPPGYF 10
TK CG P F
Sbjct: 82 TKVCGEPASF 91


>sp|ALADH_ARCFU|ALANINE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GCGPPGYF 10
GCG YF
Sbjct: 132 GCGTQAYF 139


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CGPPGYF 10
C PPG +
Sbjct: 963 CSPPGTY 969


>sp|TRUA_HALSA|TRNA pseudouridine synthase A|Halobacterium salinarum (strain ATCC

Query: 3 GCGPPGY 9
G PPGY
Sbjct: 43 GAKPPGY 49


>sp|TRUA_HALS3|TRNA pseudouridine synthase A|Halobacterium salinarum (strain ATCC

Query: 3 GCGPPGY 9
G PPGY
Sbjct: 43 GAKPPGY 49


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 2 KGCGPPGYF 10
KG G GYF
Sbjct: 60 KGAGAGGYF 68


>sp|DLDH_HALVD|DIHYDROLIPOYL dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 3 GCGPPGY 9
G GP GY
Sbjct: 16 GAGPGGY 22


>sp|DLDH3_HALMA|DIHYDROLIPOYL dehydrogenase 3|Haloarcula marismortui (strain ATCC 43049

Query: 3 GCGPPGY 9
G GP GY
Sbjct: 16 GAGPGGY 22


>sp|HMGCS_PICTO|HYDROXYMETHYLGLUTARYL-COA synthase|Picrophilus torridus (strain ATCC 700027

Query: 5 GPPGYF 10
G PGYF
Sbjct: 202 GEPGYF 207


>sp|DLDH_HALSA|DIHYDROLIPOYL dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 3 GCGPPGY 9
G GP GY
Sbjct: 16 GAGPGGY 22


>sp|RS6E_PYRIL|SMALL ribosomal subunit protein eS6|Pyrobaculum islandicum (strain DSM

Query: 5 GPPGYF 10
GPPGY+
Sbjct: 84 GPPGYW 89




105|SequenceR|530|521|AKALLTKGCG

>sp|PDAD2_METAC|PYRUVOYL-DEPENDENT arginine decarboxylase 2|Methanosarcina acetivorans (strain ATCC

Query: 2 KALLTKGCG 10
KA LTKG G
Sbjct: 5 KAFLTKGTG 13


>sp|PDAD2_METMA|PYRUVOYL-DEPENDENT arginine decarboxylase 2|Methanosarcina mazei (strain ATCC

Query: 2 KALLTKGCG 10
KA LTKG G
Sbjct: 5 KAFLTKGTG 13


>sp|MTBA_METBA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina barkeri

Query: 3 ALLTKGCG 10
LLT GCG
Sbjct: 310 GLLTVGCG 317




106|SequenceR|535|526|CENAIAKALL

>sp|SYE_METKA|GLUTAMATE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 ENAIAKALL 10
EN +A+ALL
Sbjct: 448 ENGVARALL 456


>sp|PUR2_METST|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 ENAIAKAL 9
E+AIAKAL
Sbjct: 12 EHAIAKAL 19


>sp|HUTH_THEAC|PROBABLE histidine ammonia-lyase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 ENAIAKALL 10
ENAI ALL
Sbjct: 215 ENAIRSALL 223


>sp|COFH_HALMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Haloarcula marismortui (strain ATCC

Query: 2 ENAIAKA 8
ENA+AKA
Sbjct: 28 ENALAKA 34




107|SequenceR|540|531|IFNAQCENAI

>sp|SYR_METLZ|ARGININE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 NAQCENAI 10
NAQC+ +I
Sbjct: 316 NAQCDRSI 323


>sp|FER8_METJA|UNCHARACTERIZED ferredoxin MJ0155|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IFNAQCENA 9
IF QCENA
Sbjct: 40 IFCMQCENA 48




108|SequenceR|545|536|PGKISIFNAQ

>sp|COBQ_METMP|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GKISIFN 8
GKISIFN
Sbjct: 376 GKISIFN 382


>sp|RNZ_METKA|RIBONUCLEASE Z|Methanopyrus kandleri (strain AV19 /

Query: 1 PGKISIF 7
PGKIS++
Sbjct: 181 PGKISVY 187


>sp|G6PI_METJA|GLUCOSE-6-PHOSPHATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PGKISIFNA 9
PG+ S+F A
Sbjct: 176 PGRFSVFTA 184


>sp|BRIX_METMP|PROBABLE Brix domain-containing ribosomal biogenesis|Methanococcus

Query: 1 PGKISIFN 8
PG++ IFN
Sbjct: 56 PGRLKIFN 63


>sp|RKD1_PYRCJ|ARCADIN-1 calidifontis (strain DSM 21063

Query: 1 PGKISIFNAQ 10
PG ++ F+AQ
Sbjct: 34 PGPVAAFSAQ 43


>sp|COBQ_METM7|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C7 /

Query: 2 GKISIFN 8
GKISIF+
Sbjct: 376 GKISIFD 382




109|SequenceR|550|541|MTLLEPGKIS

>sp|RNZ_METKA|RIBONUCLEASE Z|Methanopyrus kandleri (strain AV19 /

Query: 2 TLLEPGKIS 10
+L +PGKIS
Sbjct: 177 SLTKPGKIS 185


>sp|PFDA_AERPE|PREFOLDIN subunit alpha|Aeropyrum pernix (strain ATCC 700893

Query: 3 LLEPGK 8
LLEPGK
Sbjct: 72 LLEPGK 77


>sp|GGGPS_THEAC|GERANYLGERANYLGLYCERYL phosphate synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MTLLEPG 7
MTL++PG
Sbjct: 19 MTLIDPG 25


>sp|URE1_HALMA|UREASE subunit alpha|Haloarcula marismortui (strain ATCC 43049

Query: 4 LEPGKIS 10
LEPGK++
Sbjct: 425 LEPGKLA 431


>sp|G6PI_PYRAB|GLUCOSE-6-PHOSPHATE isomerase|Pyrococcus abyssi (strain GE5 /

Query: 2 TLLEPGKI 9
T+L PGK+
Sbjct: 71 TILYPGKV 78


>sp|GATE_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanothermobacter thermautotrophicus

Query: 1 MTLLEPGKIS 10
+ LLE GKIS
Sbjct: 520 IKLLEVGKIS 529




110|SequenceR|555|546|SEGFWMTLLE

>sp|SDO1_PYRHO|RIBOSOME maturation protein SDO1 homolog|Pyrococcus horikoshii (strain ATCC

Query: 1 SEGFWMTLLE 10
S+G WM L+E
Sbjct: 196 SDGSWMFLIE 205


>sp|Y1577_METJA|UNCHARACTERIZED protein MJ1577|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EGFWMTLLE 10
EGF+ TLL+
Sbjct: 332 EGFYATLLD 340


>sp|S1PNA_SULTO|BIFUNCTIONAL sugar-1-phosphate

Query: 2 EGFWMTL 8
EG+WM +
Sbjct: 203 EGYWMDI 209


>sp|SDO1_THEKO|RIBOSOME maturation protein SDO1 homolog|Thermococcus kodakarensis (strain

Query: 1 SEGFWMTLLE 10
S+G WM ++E
Sbjct: 196 SDGSWMFVIE 205


>sp|SDO1_PYRAB|RIBOSOME maturation protein SDO1 homolog|Pyrococcus abyssi (strain GE5 /

Query: 1 SEGFWMTLLE 10
S+G W+ L+E
Sbjct: 196 SDGSWLFLIE 205


>sp|Y1798_ARCFU|PUTATIVE phosphate permease AF_1798|Archaeoglobus fulgidus (strain ATCC

Query: 1 SEGFWMTL 8
S GFW+T+
Sbjct: 90 SAGFWITI 97




111|SequenceR|560|551|RVNAESEGFW

>sp|TF2B_PYRAE|TRANSCRIPTION initiation factor IIB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RVNAESEGF 9
RVN +SEG+
Sbjct: 16 RVNKDSEGY 24


>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 1 RVNAESEGFW 10
++NA+S GF+
Sbjct: 475 KINADSAGFY 484


Query: 2 VNAESEGFW 10
+N E EG W
Sbjct: 437 LNGEEEGRW 445


>sp|TF2B_PYRNV|TRANSCRIPTION initiation factor IIB|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 RVNAESEGF 9
R+N +SEG+
Sbjct: 16 RINRDSEGY 24


>sp|TF2B_PYRAR|TRANSCRIPTION initiation factor IIB|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 RVNAESEGF 9
R+N +SEG+
Sbjct: 16 RINRDSEGY 24


>sp|HELS_HALMA|ATP-DEPENDENT DNA helicase Hel308|Haloarcula marismortui (strain ATCC 43049

Query: 3 NAESEGFW 10
N ESEG W
Sbjct: 104 NYESEGGW 111


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 1 RVNAESEGFW 10
+VN S GF+
Sbjct: 480 KVNVNSSGFY 489


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 3 NAESEGFW 10
+AE+EG W
Sbjct: 988 DAETEGDW 995




112|SequenceR|565|556|KDFIERVNAE

>sp|APGM_METPE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosphaerula palustris (strain ATCC

Query: 1 KDFIERVNA 9
+DFIER++A
Sbjct: 319 RDFIERIDA 327


>sp|QUEC_PYRHO|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KDFIERVN 8
K+F+ERVN
Sbjct: 145 KEFVERVN 152


>sp|SYM_IGNH4|METHIONINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 KDFIERVN 8
KDF+ERV+
Sbjct: 538 KDFLERVD 545


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 1 KDFIERVNAE 10
KDFIE+V +
Sbjct: 567 KDFIEKVKGD 576


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 1 KDFIERVNAE 10
+ F+ER+N E
Sbjct: 435 RTFVERINYE 444


>sp|APE1_AERPE|HOMING endonuclease I-ApeI|Aeropyrum pernix (strain ATCC 700893

Query: 1 KDFIERV 7
KD++ERV
Sbjct: 34 KDYLERV 40


>sp|MOAA_METTM|PROBABLE GTP 3',8-cyclase|Methanothermobacter marburgensis (strain ATCC

Query: 1 KDFIERVNA 9
KD++ERV A
Sbjct: 131 KDYLERVKA 139


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KDFIERVNAE 10
KD+IE NA+
Sbjct: 738 KDYIELTNAK 747


>sp|QUEC_PYRAB|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 KDFIERVNA 9
K+F++R+N+
Sbjct: 145 KEFVDRINS 153


>sp|CUTA_SULAC|GLYCERALDEHYDE dehydrogenase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 1 KDFIERVNAE 10
+D I+RVN E
Sbjct: 122 RDAIDRVNVE 131


>sp|RL7A_META3|LARGE ribosomal subunit protein eL8|Methanococcus aeolicus (strain ATCC

Query: 1 KDFIERVN 8
KD +E++N
Sbjct: 106 KDLVEKIN 113


>sp|GSA_SULAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KDFIERV 7
KDF+ER+
Sbjct: 211 KDFLERL 217


>sp|RL11_METAR|LARGE ribosomal subunit protein uL11|Methanocella arvoryzae (strain DSM

Query: 1 KDFIERVNA 9
K+FI VNA
Sbjct: 141 KEFIAEVNA 149


>sp|GRPE_HALMT|PROTEIN GrpE|Haloferax mediterranei (strain ATCC 33500

Query: 1 KDFIERV 7
+DF+ERV
Sbjct: 141 EDFVERV 147


>sp|Y1662_ARCFU|UNCHARACTERIZED protein AF_1662|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DFIERVN 8
DF+ER N
Sbjct: 65 DFVERAN 71


>sp|LYSK_SULTO|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KDFIERVNAE 10
KDF E+V+ E
Sbjct: 33 KDFFEKVSKE 42


>sp|APGM_METS3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanobrevibacter smithii (strain ATCC

Query: 1 KDFIERVN 8
+DFIE+V+
Sbjct: 319 RDFIEKVD 326


>sp|APGM_METST|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosphaera stadtmanae (strain ATCC

Query: 1 KDFIERVN 8
+DFIE+V+
Sbjct: 317 RDFIEKVD 324


>sp|TOP6A_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 3 FIERVNAE 10
FI+RVN E
Sbjct: 221 FIKRVNEE 228


>sp|MTMC1_METBA|MONOMETHYLAMINE corrinoid protein 1|Methanosarcina barkeri

Query: 1 KDFIERVNAE 10
KD ++R+N E
Sbjct: 164 KDLMDRLNEE 173


>sp|NK_METJA|NUCLEOSIDE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DFIERVNA 9
D++ERV+A
Sbjct: 203 DYLERVDA 210


>sp|PELO_PYRAB|PROTEIN pelota homolog|Pyrococcus abyssi (strain GE5 /

Query: 1 KDFIERVNAE 10
KD IER N +
Sbjct: 191 KDLIERENVQ 200


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KDFIERV 7
KDFIE++
Sbjct: 594 KDFIEKI 600


>sp|CBIH_METJA|PROBABLE cobalt-factor III C(17)-methyltransferase|Methanocaldococcus

Query: 1 KDFIERVN 8
K F+ER+N
Sbjct: 36 KKFVERLN 43


>sp|PYRH_PICTO|URIDYLATE kinase|Picrophilus torridus (strain ATCC 700027

Query: 3 FIERVNAE 10
F ER+NA+
Sbjct: 127 FAERINAD 134


>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 1 KDFIERVNA 9
+D++E+VN+
Sbjct: 39 QDYLEKVNS 47




113|SequenceR|570|561|AAQRAKDFIE

>sp|LYSK_SULTO|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 QRAKDFIE 10
+RAKDF E
Sbjct: 30 ERAKDFFE 37


>sp|PURA_THESM|ADENYLOSUCCINATE synthetase|Thermococcus sibiricus (strain DSM 12597

Query: 3 QRAKDFI 9
Q+AKDFI
Sbjct: 303 QKAKDFI 309


>sp|SYP_THEKO|PROLINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 QRAKDFIE 10
QRAK+F+E
Sbjct: 394 QRAKEFLE 401


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 AAQRAKDFIE 10
A + AKDFIE
Sbjct: 926 ALREAKDFIE 935


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 AAQRAKDFIE 10
A + AKDFIE
Sbjct: 926 ALREAKDFIE 935


>sp|PURA_METST|ADENYLOSUCCINATE synthetase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 AQRAKDFIE 10
+Q A+D+IE
Sbjct: 302 SQEARDYIE 310


>sp|PURA_THEKO|ADENYLOSUCCINATE synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 QRAKDFIE 10
+RAK+F+E
Sbjct: 303 KRAKEFVE 310


>sp|AMPPA_PYRAB|AMP phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 1 AAQRAKDFIE 10
A AKDFIE
Sbjct: 295 ARSLAKDFIE 304


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 QRAKDFIE 10
+ AKDFIE
Sbjct: 928 REAKDFIE 935


>sp|AMPPA_PYRHO|AMP phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 AKDFIE 10
AKDFIE
Sbjct: 299 AKDFIE 304


>sp|AMPPA_THESM|AMP phosphorylase|Thermococcus sibiricus (strain DSM 12597

Query: 1 AAQRAKDFIE 10
A AKDFIE
Sbjct: 295 ARSLAKDFIE 304




114|SequenceR|575|566|FLVCPAAQRA

>sp|RIBL_HALTV|FAD synthase|Haloterrigena turkmenica (strain ATCC 51198

Query: 3 VCPAAQR 9
+CPAAQR
Sbjct: 49 ICPAAQR 55


>sp|SURE_ARCFU|5'-NUCLEOTIDASE SurE|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FLVCPAAQRA 10
F+V PA QR+
Sbjct: 30 FVVAPAVQRS 39


>sp|MPTA_METTH|GTP cyclohydrolase MptA|Methanothermobacter thermautotrophicus (strain

Query: 3 VCPAAQRA 10
VCP AQ +
Sbjct: 161 VCPCAQES 168


>sp|MPTA_METST|GTP cyclohydrolase MptA|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 VCPAAQRA 10
VCP AQ +
Sbjct: 162 VCPCAQES 169


>sp|MPTA_METS3|GTP cyclohydrolase MptA|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 VCPAAQRA 10
VCP AQ +
Sbjct: 160 VCPCAQES 167


>sp|MPTA_AERPE|GTP cyclohydrolase MptA|Aeropyrum pernix (strain ATCC 700893

Query: 3 VCPAAQ 8
VCP+AQ
Sbjct: 146 VCPSAQ 151




115|SequenceR|580|571|DLEDFFLVCP

>sp|NADE_THESM|NH(3)-DEPENDENT NAD(+) synthetase|Thermococcus sibiricus (strain DSM 12597

Query: 1 DLEDFFLVC 9
D+ED LVC
Sbjct: 67 DVEDALLVC 75


>sp|Y1061_METJA|UNCHARACTERIZED membrane protein MJ1061|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DLEDFFLVCP 10
+LED F+V P
Sbjct: 288 ELEDMFVVYP 297


>sp|Y889_METJA|UNCHARACTERIZED protein MJ0889|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EDFFLVCP 10
+D++L CP
Sbjct: 131 KDYYLYCP 138


>sp|RNJ_PYRAB|RIBONUCLEASE J|Pyrococcus abyssi (strain GE5 /

Query: 2 LEDFFL 7
LEDFFL
Sbjct: 229 LEDFFL 234


>sp|DNLI_NITMS|DNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 DLEDFF 6
D+EDFF
Sbjct: 387 DIEDFF 392


>sp|Y1250_THEVO|UPF0179 protein TV1250|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DLEDFFLV 8
+LEDFF++
Sbjct: 72 ELEDFFII 79


>sp|K6PF_METAC|ADP-SPECIFIC phosphofructokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DLEDFFLVC 9
DLE+F L C
Sbjct: 420 DLENFQLYC 428


>sp|APGM_PICTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Picrophilus torridus (strain ATCC 700027

Query: 1 DLEDFF 6
DLEDF+
Sbjct: 227 DLEDFY 232


>sp|GGR_METS3|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LEDFFLVCP 10
L+DF CP
Sbjct: 238 LDDFIAKCP 246


>sp|METXA_METZD|HOMOSERINE O-acetyltransferase|Methanosalsum zhilinae (strain DSM 4017

Query: 1 DLEDFFLVC 9
D + +F+VC
Sbjct: 85 DTDKYFIVC 93


>sp|NADE_THEKO|NH(3)-DEPENDENT NAD(+) synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DLEDFFLVC 9
D+ED LVC
Sbjct: 67 DVEDAKLVC 75


>sp|METXA_HALGM|HOMOSERINE O-acetyltransferase|Haloferax gibbonsii (strain ATCC 33959

Query: 1 DLEDFFLVC 9
D D++++C
Sbjct: 89 DTNDYYVIC 97


>sp|METXA_HALPT|HOMOSERINE O-acetyltransferase|Haloferax prahovense (strain DSM 18310

Query: 1 DLEDFFLVC 9
D D++++C
Sbjct: 89 DTNDYYVIC 97


>sp|METXA_HALVD|HOMOSERINE O-acetyltransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 DLEDFFLVC 9
D D++++C
Sbjct: 89 DTNDYYVIC 97


>sp|Y1691_METM7|UPF0305 protein MmarC7_1691|Methanococcus maripaludis (strain C7 /

Query: 2 LEDFFLVCP 10
LEDFF P
Sbjct: 45 LEDFFTFFP 53


>sp|Y909_METM5|UPF0305 protein MmarC5_0909|Methanococcus maripaludis (strain C5 /

Query: 2 LEDFFLVCP 10
LEDFF P
Sbjct: 45 LEDFFTFFP 53




116|SequenceR|585|576|AKAISDLEDF

>sp|GRPE_PICTO|PROTEIN GrpE|Picrophilus torridus (strain ATCC 700027

Query: 2 KAISDLEDF 10
+A+SDLED+
Sbjct: 40 QAMSDLEDY 48


>sp|CSM5_METJA|CRISPR system Cms protein Csm5|Methanocaldococcus jannaschii (strain

Query: 2 KAISDLEDF 10
KA+SDL+D
Sbjct: 83 KAVSDLDDL 91


>sp|RL18E_SULAC|LARGE ribosomal subunit protein eL18|Sulfolobus acidocaldarius (strain

Query: 2 KAISDLEDF 10
KAI +L DF
Sbjct: 100 KAIQELNDF 108


>sp|HIS6_METKA|IMIDAZOLE glycerol phosphate synthase subunit|Methanopyrus kandleri (strain

Query: 3 AISDLEDF 10
ISD+EDF
Sbjct: 83 GISDVEDF 90


>sp|COMB_METJA|2-PHOSPHOSULFOLACTATE phosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AKAISDLED 9
AKA+ D ED
Sbjct: 122 AKAVEDFED 130


>sp|Y1562_METJA|PUTATIVE membrane protein MJ1562|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KAISDLED 9
KAI +LED
Sbjct: 100 KAIKELED 107




117|SequenceR|590|581|INGGRAKAIS

>sp|DNAG_METS3|DNA primase DnaG|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 NGGRAKA 8
NGGRAK
Sbjct: 66 NGGRAKG 72


>sp|CBIZ_METMA|ADENOSYLCOBINAMIDE amidohydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 INGGRAK 7
+NGGRA+
Sbjct: 23 LNGGRAR 29


>sp|RNFG_METAC|ION-TRANSLOCATING oxidoreductase complex subunit G|Methanosarcina acetivorans (strain

Query: 2 NGGRAKAIS 10
NGG+ AIS
Sbjct: 155 NGGQVDAIS 163




118|SequenceR|595|586|GGGDGINGGR

>sp|COXX_SULTO|PROTOHEME IX farnesyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GGGDGINGG 9
GGG INGG
Sbjct: 71 GGGMIINGG 79


>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 2 GGDGINGGR 10
GG GI G R
Sbjct: 62 GGTGIRGAR 70


>sp|Y1051_METJA|UNCHARACTERIZED protein MJ1051|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGGDGIN 7
GGGDG++
Sbjct: 113 GGGDGLS 119


>sp|TRPD_SULTO|ANTHRANILATE phosphoribosyltransferase|Sulfurisphaera tokodaii (strain DSM

Query: 2 GGDGIN 7
GGDG+N
Sbjct: 81 GGDGLN 86


>sp|CDPAS_NATPD|CDP-ARCHAEOL synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GGGDGINGGR 10
GGG I+GGR
Sbjct: 27 GGGRPIDGGR 36


>sp|APGM_PYRCJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum calidifontis (strain DSM

Query: 1 GGGDGINGGR 10
GGGD NGG+
Sbjct: 11 GGGDRPNGGK 20


>sp|CDPAS_METAC|CDP-ARCHAEOL synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GGGDGINGGR 10
GGG I+GGR
Sbjct: 15 GGGKPIDGGR 24


>sp|DTDA_DESA1|D-AMINOACYL-TRNA deacylase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 GGDGINGGR 10
GG+ ++GGR
Sbjct: 92 GGEALSGGR 100


>sp|CDPAS_METBF|CDP-ARCHAEOL synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GGGDGINGGR 10
GGG I+GGR
Sbjct: 15 GGGKPIDGGR 24


>sp|PNCB_THEAC|PUTATIVE nicotinate phosphoribosyltransferase|Thermoplasma acidophilum

Query: 1 GGGDGING 8
GG DG++G
Sbjct: 158 GGADGVSG 165


>sp|CDPAS_METMA|CDP-ARCHAEOL synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GGGDGINGGR 10
GGG I+GGR
Sbjct: 15 GGGKPIDGGR 24


>sp|AMPD_METTH|ANHYDROMEVALONATE phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 1 GGGDGINGGR 10
GG DG GR
Sbjct: 89 GGLDGYRSGR 98


>sp|CDPAS_METPE|CDP-ARCHAEOL synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GGGDGINGGR 10
GGG I+GGR
Sbjct: 15 GGGTPIDGGR 24


>sp|TRPB1_ARCFU|TRYPTOPHAN synthase beta chain 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GGGDGINGGR 10
GG+GI GR
Sbjct: 263 AGGEGIESGR 272


>sp|CDPAS_THEGJ|CDP-ARCHAEOL synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GGGDGINGGR 10
GGG I+GGR
Sbjct: 28 GGGRPIDGGR 37


>sp|GGR1_METST|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GGDGING 8
GGD ING
Sbjct: 256 GGDPING 262


>sp|AATB_METMJ|A-TYPE ATP synthase subunit B|Methanoculleus marisnigri (strain ATCC

Query: 1 GGGDGINGG 9
GGG I+GG
Sbjct: 90 GGGKPIDGG 98


>sp|AATB_METLZ|A-TYPE ATP synthase subunit B|Methanocorpusculum labreanum (strain ATCC

Query: 1 GGGDGINGG 9
GGG I+GG
Sbjct: 90 GGGKPIDGG 98


>sp|CDPAS_THEKO|CDP-ARCHAEOL synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GGGDGINGGR 10
GGG I+GGR
Sbjct: 28 GGGRPIDGGR 37




119|SequenceR|600|591|VRDAAGGGDG

>sp|HEM1_IGNH4|GLUTAMYL-TRNA reductase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VRDAAGGGD 9
VR+AAG GD
Sbjct: 394 VREAAGKGD 402


>sp|HEM1_HYPBU|GLUTAMYL-TRNA reductase|Hyperthermus butylicus (strain DSM 5456

Query: 2 RDAAGGGDG 10
R+AAGG DG
Sbjct: 164 REAAGGFDG 172


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 3 DAAGGGDG 10
DAAG G G
Sbjct: 760 DAAGDGKG 767


>sp|SPEE_THEON|POLYAMINE aminopropyltransferase|Thermococcus onnurineus (strain NA1)

Query: 6 GGGDG 10
GGGDG
Sbjct: 88 GGGDG 92


>sp|SPEE_METJA|POLYAMINE aminopropyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 6 GGGDG 10
GGGDG
Sbjct: 91 GGGDG 95


>sp|SPEE_KORCO|POLYAMINE aminopropyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 6 GGGDG 10
GGGDG
Sbjct: 105 GGGDG 109


>sp|SPEE_ARCFU|POLYAMINE aminopropyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 GGGDG 10
GGGDG
Sbjct: 80 GGGDG 84


>sp|FLAK_METMP|PREFLAGELLIN peptidase|Methanococcus maripaludis (strain DSM 14266

Query: 6 GGGDG 10
GGGDG
Sbjct: 76 GGGDG 80


>sp|FLAK_METM6|PREFLAGELLIN peptidase|Methanococcus maripaludis (strain C6 /

Query: 6 GGGDG 10
GGGDG
Sbjct: 76 GGGDG 80


>sp|FLAK_METJA|PREFLAGELLIN peptidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 GGGDG 10
GGGDG
Sbjct: 76 GGGDG 80


>sp|SPEE_PYRFU|POLYAMINE aminopropyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 6 GGGDG 10
GGGDG
Sbjct: 83 GGGDG 87


>sp|SPEE_THEKO|POLYAMINE aminopropyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 6 GGGDG 10
GGGDG
Sbjct: 88 GGGDG 92


>sp|KDGA_THETE|2-DEHYDRO-3-DEOXY-D-GLUCONATE/2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE aldolase|Thermoproteus tenax

Query: 1 VRDAAGGGD 9
+RDA GD
Sbjct: 228 IRDAVAAGD 236


>sp|SPEE_PYRAB|POLYAMINE aminopropyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 6 GGGDG 10
GGGDG
Sbjct: 81 GGGDG 85




120|SequenceR|605|596|LIQNIVRDAA

>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LIQNIVRD 8
++QN VRD
Sbjct: 805 MVQNTVRD 812


>sp|THPR_METTH|RNA 2',3'-cyclic phosphodiesterase|Methanothermobacter

Query: 2 IQNIVRD 8
I+N+VRD
Sbjct: 59 IENVVRD 65


>sp|FKBPS_METTL|SHORT-TYPE peptidyl-prolyl cis-trans isomerase|Methanothermococcus

Query: 1 LIQNIVRDA 9
LIQ I RDA
Sbjct: 88 LIQKIPRDA 96




121|SequenceR|610|601|GDMETLIQNI

>sp|RL7A_AERPE|LARGE ribosomal subunit protein eL8|Aeropyrum pernix (strain ATCC 700893

Query: 1 GDMETLIQNI 10
GD ETL++ I
Sbjct: 105 GDAETLVREI 114


>sp|SRP54_PYRAE|SIGNAL recognition particle 54 kDa|Pyrobaculum aerophilum (strain ATCC

Query: 1 GDMETLIQNI 10
GD++TL++ I
Sbjct: 294 GDLDTLLEKI 303


>sp|SRP54_THEVO|SIGNAL recognition particle 54 kDa|Thermoplasma volcanium (strain ATCC

Query: 1 GDMETLIQNI 10
GD+ETL + +
Sbjct: 292 GDLETLFETV 301


>sp|SRP54_ACIAM|SIGNAL recognition particle 54 kDa|Acidianus ambivalens (Desulfurolobus

Query: 1 GDMETLIQNI 10
GD+ET+++ I
Sbjct: 297 GDIETILEKI 306


>sp|Y175_METJA|UNCHARACTERIZED protein MJ0175|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GDMETLIQNI 10
GD+ T IQN+
Sbjct: 197 GDIVTFIQNL 206


>sp|SRP54_METST|SIGNAL recognition particle 54 kDa|Methanosphaera stadtmanae (strain ATCC

Query: 1 GDMETLIQN 9
GD++TLI+
Sbjct: 295 GDLDTLIEK 303


>sp|Y779_METS3|UPF0173 metal-dependent hydrolase Msm_0779|Methanobrevibacter smithii

Query: 1 GDMETLIQNI 10
GDM+T+I I
Sbjct: 148 GDMKTIIGEI 157




122|SequenceR|615|606|KKTSMGDMET

>sp|SYR_METST|ARGININE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 SMGDMET 10
SMGDM T
Sbjct: 37 SMGDMST 43


>sp|METXA_METVS|HOMOSERINE O-acetyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 KKTSMGDMET 10
KK S+G++ET
Sbjct: 2 KKGSVGNVET 11




123|SequenceR|620|611|IIFVNKKTSM

>sp|SYFA_METLZ|PHENYLALANINE--TRNA ligase alpha subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 IIFVNKKTSM 10
I+FVN+ T++
Sbjct: 116 IVFVNENTAV 125




124|SequenceR|625|616|RNTAGIIFVN

>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 3 TAGIIFVN 10
+AGI+FVN
Sbjct: 687 SAGIVFVN 694


>sp|METAA_METAX|HOMOSERINE O-acetyltransferase|Methanomethylophilus alvi (strain Mx1201)

Query: 1 RNTAGIIFVN 10
R+TA +IF N
Sbjct: 278 RSTANLIFTN 287


>sp|Y1446_ARCFU|UNCHARACTERIZED protein AF_1446|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NTAGIIFVN 10
N G++FVN
Sbjct: 292 NADGVVFVN 300


>sp|ECFA_METMP|ENERGY-COUPLING factor transporter ATP-binding protein|Methanococcus maripaludis

Query: 1 RNTAGIIFVN 10
R T GI+F N
Sbjct: 79 RKTVGIVFQN 88


>sp|FBPAP_METJA|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 NTAGIIF 8
NTAG++F
Sbjct: 156 NTAGLVF 162


>sp|Y331_METJA|UNCHARACTERIZED protein MJ0331|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RNTAGIIF 8
RNT G+I+
Sbjct: 57 RNTKGLIY 64


>sp|ECFA_METJA|ENERGY-COUPLING factor transporter ATP-binding protein|Methanocaldococcus

Query: 1 RNTAGIIFVN 10
R T G++F N
Sbjct: 79 RKTVGLVFQN 88


>sp|METAA_THEXX|HOMOSERINE O-acetyltransferase|Thermoplasmatales archaeon (strain BRNA1)

Query: 1 RNTAGIIFVN 10
R+TA +IF N
Sbjct: 278 RSTANLIFGN 287


>sp|ECFA1_METHJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanospirillum hungatei

Query: 1 RNTAGIIFVN 10
R T G++F N
Sbjct: 77 RRTVGLVFQN 86




125|SequenceR|630|621|DIIDPRNTAG

>sp|ANTRA_HALVD|PROBABLE anion import ATP-binding protein|Haloferax volcanii (strain ATCC

Query: 3 IDPRNTA 9
+DPRNTA
Sbjct: 213 LDPRNTA 219


>sp|MTRB_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanococcus maripaludis (strain

Query: 3 IDPRNT 8
+DPRNT
Sbjct: 54 LDPRNT 59


>sp|SYFA_THEAC|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 IDPRNTA 9
+DP+NTA
Sbjct: 148 MDPKNTA 154


>sp|PSTB2_NATPD|PHOSPHATE import ATP-binding protein PstB|Natronomonas pharaonis (strain ATCC

Query: 3 IDPRNTA 9
+DPRNTA
Sbjct: 209 LDPRNTA 215


>sp|RL22_METM7|LARGE ribosomal subunit protein uL22|Methanococcus maripaludis (strain

Query: 4 DPRNTA 9
DP+NTA
Sbjct: 11 DPKNTA 16


>sp|RL22_METM6|LARGE ribosomal subunit protein uL22|Methanococcus maripaludis (strain

Query: 4 DPRNTA 9
DP+NTA
Sbjct: 11 DPKNTA 16


>sp|RL22_METM5|LARGE ribosomal subunit protein uL22|Methanococcus maripaludis (strain

Query: 4 DPRNTA 9
DP+NTA
Sbjct: 11 DPKNTA 16


>sp|PYRC_METMA|DIHYDROOROTASE mazei (strain ATCC BAA-159

Query: 2 IIDPRN 7
I+DPRN
Sbjct: 389 IVDPRN 394


>sp|RL22_METMP|LARGE ribosomal subunit protein uL22|Methanococcus maripaludis (strain

Query: 4 DPRNTA 9
DP+NTA
Sbjct: 11 DPKNTA 16


>sp|PYRC_METAC|DIHYDROOROTASE acetivorans (strain ATCC 35395

Query: 2 IIDPRN 7
I+DPRN
Sbjct: 389 IVDPRN 394


>sp|PSTB_PYRAE|PHOSPHATE import ATP-binding protein PstB|Pyrobaculum aerophilum (strain ATCC

Query: 3 IDPRNTA 9
+DP NTA
Sbjct: 177 LDPENTA 183


>sp|RL6_METKA|LARGE ribosomal subunit protein uL6|Methanopyrus kandleri (strain AV19 /

Query: 1 DIIDPRNT 8
+I+DP NT
Sbjct: 142 EIVDPENT 149


>sp|GLMM_PYRAB|PROBABLE phosphoglucosamine mutase|Pyrococcus abyssi (strain GE5 /

Query: 2 IIDPRNTAG 10
+IDP N AG
Sbjct: 169 VIDPGNGAG 177


>sp|Y2029_AERPE|UPF0284 protein APE_2029.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 IIDPRNTA 9
++DPR+TA
Sbjct: 265 MLDPRSTA 272


>sp|FBPAP_METJA|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 DPRNTAG 10
DP NTAG
Sbjct: 153 DPFNTAG 159


>sp|PGMUT_SULTO|PHOSPHOGLUCOSAMINE/PHOSPHOGALACTOSAMINE mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IIDPRNTAG 10
+IDP N+ G
Sbjct: 176 LIDPANSVG 184


>sp|FBPAP_THEON|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus onnurineus (strain NA1)

Query: 4 DPRNTAG 10
DP NTAG
Sbjct: 152 DPFNTAG 158


>sp|FBPAP_THEKO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 DPRNTAG 10
DP NTAG
Sbjct: 152 DPFNTAG 158


>sp|FBPAP_METS5|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Metallosphaera sedula (strain ATCC 51363

Query: 4 DPRNTAG 10
DP NTAG
Sbjct: 148 DPFNTAG 154


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 2 IIDPRNT 8
+IDPR T
Sbjct: 213 VIDPRRT 219


>sp|FBPAP_METTM|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanothermobacter marburgensis (strain ATCC

Query: 4 DPRNTAG 10
DP NTAG
Sbjct: 148 DPFNTAG 154


>sp|FBPAP_IGNH4|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 DPRNTAG 10
DP NTAG
Sbjct: 150 DPFNTAG 156




126|SequenceR|635|626|RLIAPDIIDP

>sp|CBIA_METM7|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C7 /

Query: 3 IAPDIIDP 10
I PD IDP
Sbjct: 37 IGPDYIDP 44


>sp|CBIA_METM5|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C5 /

Query: 3 IAPDIIDP 10
I PD IDP
Sbjct: 37 IGPDYIDP 44


>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 IAPDIIDP 10
+ PD IDP
Sbjct: 39 VGPDFIDP 46


>sp|CBIA_ARCFU|COBYRINATE a,c-diamide synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IAPDIIDP 10
+ PD IDP
Sbjct: 45 VGPDFIDP 52


>sp|CBIA_METTH|COBYRINATE a,c-diamide synthase|Methanothermobacter thermautotrophicus

Query: 3 IAPDIIDP 10
+ PD IDP
Sbjct: 35 VGPDYIDP 42


>sp|CBIA_METST|COBYRINATE a,c-diamide synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 IAPDIIDP 10
+ PD IDP
Sbjct: 37 VGPDYIDP 44


>sp|CBIA_METS3|COBYRINATE a,c-diamide synthase|Methanobrevibacter smithii (strain ATCC

Query: 3 IAPDIIDP 10
+ PD IDP
Sbjct: 36 VGPDYIDP 43


>sp|CBIA_METJA|COBYRINATE a,c-diamide synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 IAPDIIDP 10
+ PD IDP
Sbjct: 39 VGPDYIDP 46


>sp|CBIA_THEAC|COBYRINATE a,c-diamide synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 IAPDIIDP 10
I PD IDP
Sbjct: 40 IGPDYIDP 47


>sp|CCA_SULTO|CCA-ADDING enzyme|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LIAPDIIDP 10
LI PD +DP
Sbjct: 212 LIVPDPVDP 220


>sp|CBIA_METVS|COBYRINATE a,c-diamide synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 IAPDIIDP 10
+ PD IDP
Sbjct: 37 VGPDYIDP 44


>sp|PYRB_CALMQ|ASPARTATE carbamoyltransferase catalytic subunit|Caldivirga maquilingensis

Query: 1 RLIAPDIIDP 10
RLI+P+I+ P
Sbjct: 183 RLISPEILRP 192


>sp|CCA_SACS2|CCA-ADDING enzyme|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LIAPDIIDP 10
LI PD +DP
Sbjct: 211 LIIPDPVDP 219


>sp|CCA_SACI6|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LIAPDIIDP 10
LI PD +DP
Sbjct: 211 LIIPDPVDP 219


>sp|CCA_SACI4|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LIAPDIIDP 10
LI PD +DP
Sbjct: 211 LIIPDPVDP 219


>sp|CCA_SACI3|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 LIAPDIIDP 10
LI PD +DP
Sbjct: 211 LIIPDPVDP 219


>sp|CCA_SACI2|CCA-ADDING enzyme|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 LIAPDIIDP 10
LI PD +DP
Sbjct: 211 LIIPDPVDP 219


>sp|CCA_SACI1|CCA-ADDING enzyme|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 LIAPDIIDP 10
LI PD +DP
Sbjct: 211 LIIPDPVDP 219


>sp|CCA_SACSH|CCA-ADDING enzyme|Saccharolobus shibatae (strain ATCC 51178

Query: 2 LIAPDIIDP 10
LI PD +DP
Sbjct: 211 LIIPDPVDP 219


>sp|CCA_SACI7|CCA-ADDING enzyme|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 LIAPDIIDP 10
LI PD +DP
Sbjct: 211 LIIPDPVDP 219


>sp|CBIA_SULTO|COBYRINATE a,c-diamide synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 APDIIDP 10
PD IDP
Sbjct: 40 GPDFIDP 46


>sp|CBIA_SACS2|COBYRINATE a,c-diamide synthase|Saccharolobus solfataricus (strain ATCC

Query: 4 APDIIDP 10
PD IDP
Sbjct: 38 GPDFIDP 44


>sp|CBIA_THEVO|COBYRINATE a,c-diamide synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 IAPDIIDP 10
+ PD IDP
Sbjct: 40 VGPDYIDP 47


>sp|CBIA_PICTO|COBYRINATE a,c-diamide synthase|Picrophilus torridus (strain ATCC 700027

Query: 3 IAPDIIDP 10
+ PD IDP
Sbjct: 39 VGPDYIDP 46


>sp|MVK_THESM|MEVALONATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 5 PDIIDP 10
P+IIDP
Sbjct: 213 PEIIDP 218


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 5 PDIIDP 10
PDIIDP
Sbjct: 599 PDIIDP 604


>sp|COFG_METMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 IAPDIIDP 10
+AP++IDP
Sbjct: 238 VAPNLIDP 245


>sp|COFG_METBU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 IAPDIIDP 10
+AP++IDP
Sbjct: 242 VAPNLIDP 249


>sp|COFG_METBF|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 IAPDIIDP 10
+AP++IDP
Sbjct: 238 VAPNLIDP 245


>sp|COFG_METAC|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 IAPDIIDP 10
+AP++IDP
Sbjct: 232 VAPNLIDP 239


>sp|NUCS_AERPE|ENDONUCLEASE NucS|Aeropyrum pernix (strain ATCC 700893

Query: 2 LIAPDIID 9
L+APDI D
Sbjct: 217 LVAPDISD 224


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 5 PDIIDP 10
PDIIDP
Sbjct: 609 PDIIDP 614


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 PDIIDP 10
PDI+DP
Sbjct: 300 PDILDP 305


>sp|MCH_METHJ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 APDIID 9
APDI+D
Sbjct: 241 APDIVD 246


>sp|RFCL_METBF|REPLICATION factor C large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 3 IAPDIIDP 10
+APDI+ P
Sbjct: 517 LAPDILAP 524


>sp|DCDA_METJA|DIAMINOPIMELATE decarboxylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LIAPDIIDP 10
LIA DI+ P
Sbjct: 427 LIAKDIVPP 435


>sp|CCA_HALMA|CCA-ADDING enzyme|Haloarcula marismortui (strain ATCC 43049

Query: 1 RLIAPDIID 9
R APD++D
Sbjct: 292 RFAAPDVVD 300


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 5 PDIIDP 10
PDI+DP
Sbjct: 297 PDILDP 302


>sp|RF1_AERPE|PEPTIDE chain release factor subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 RLIAPDIID 9
+++AP+++D
Sbjct: 246 KILAPELVD 254


>sp|AMPA_CENSY|PROBABLE cytosol aminopeptidase|Cenarchaeum symbiosum (strain A)

Query: 4 APDIIDP 10
AP I+DP
Sbjct: 107 APSILDP 113


>sp|RSMA_THEGJ|PROBABLE ribosomal RNA small subunit|Thermococcus gammatolerans (strain

Query: 2 LIAPDIID 9
LI PDII+
Sbjct: 25 LIVPDIIE 32


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 5 PDIIDP 10
PDI+DP
Sbjct: 308 PDILDP 313


>sp|CBIA_HALMA|COBYRINATE a,c-diamide synthase|Haloarcula marismortui (strain ATCC 43049

Query: 4 APDIIDP 10
PD IDP
Sbjct: 39 GPDFIDP 45


>sp|Y052_THEAC|DNA-BINDING protein Ta0052|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RLIAPDIID 9
RL+ PD+ D
Sbjct: 62 RLVRPDLAD 70


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 5 PDIIDP 10
PDI+DP
Sbjct: 297 PDILDP 302


>sp|HUTI_PYRAR|IMIDAZOLONEPROPIONASE arsenaticum (strain DSM 13514

Query: 2 LIAPDIIDP 10
LI P ++DP
Sbjct: 63 LITPGLVDP 71


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 5 PDIIDP 10
PDI+DP
Sbjct: 297 PDILDP 302


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 5 PDIIDP 10
PDI+DP
Sbjct: 297 PDILDP 302


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 5 PDIIDP 10
PDI+DP
Sbjct: 288 PDILDP 293


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 PDIIDP 10
PDI+DP
Sbjct: 289 PDILDP 294


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 PDIIDP 10
PD++DP
Sbjct: 308 PDVLDP 313


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 5 PDIIDP 10
PDI+DP
Sbjct: 287 PDILDP 292


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 PDIIDP 10
PDI+DP
Sbjct: 286 PDILDP 291


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 5 PDIIDP 10
PDI+DP
Sbjct: 286 PDILDP 291


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 PDIIDP 10
PDI+DP
Sbjct: 319 PDILDP 324


>sp|CCA_AERPE|CCA-ADDING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 2 LIAPDIIDP 10
+I PD +DP
Sbjct: 241 IIVPDPVDP 249


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 PDIIDP 10
PD++DP
Sbjct: 308 PDVLDP 313


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 PDIIDP 10
PDI+DP
Sbjct: 287 PDILDP 292


>sp|Y008_THEVO|DNA-BINDING protein TV0008|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RLIAPDIID 9
RL+ PD+ D
Sbjct: 62 RLVRPDLAD 70




127|SequenceR|640|631|DLRGPRLIAP

>sp|ILVC_METB6|KETOL-ACID reductoisomerase (NADP(+))|Methanoregula boonei (strain DSM 21154

Query: 3 RGPRLIAP 10
RGPR+I P
Sbjct: 261 RGPRVIGP 268


>sp|ILVC_METMJ|KETOL-ACID reductoisomerase (NADP(+))|Methanoculleus marisnigri (strain ATCC

Query: 3 RGPRLIAP 10
RGPR+I P
Sbjct: 261 RGPRVIGP 268


>sp|IF2B_META3|TRANSLATION initiation factor 2 subunit|Methanococcus aeolicus (strain ATCC

Query: 1 DLRGPRLI 8
D+ GPRLI
Sbjct: 75 DVEGPRLI 82


>sp|Y38K_THETE|UNCHARACTERIZED 38 kDa protein in|Thermoproteus tenax

Query: 1 DLRGPR 6
DLRGPR
Sbjct: 66 DLRGPR 71


>sp|SYD_PYRAB|ASPARTATE--TRNA(ASP) ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 DLRGPRLIA 9
DLR PR+++
Sbjct: 127 DLRNPRVMS 135


>sp|CFBD_METTH|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanothermobacter

Query: 4 GPRLIAP 10
GPRL+ P
Sbjct: 311 GPRLVEP 317




128|SequenceR|645|636|IYILQDLRGP

>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IYILQDLRG 9
IYI+QD G
Sbjct: 76 IYIMQDESG 84


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 ILQDLRG 9
+L+DLRG
Sbjct: 386 VLEDLRG 392


>sp|HIS8_METTH|HISTIDINOL-PHOSPHATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 2 YILQDLRG 9
YIL D+RG
Sbjct: 311 YILIDVRG 318




129|SequenceR|650|641|EDPLPIYILQ

>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 2 DPLPIY 7
DPLP+Y
Sbjct: 573 DPLPVY 578


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EDPLPIYIL 9
EDP P YI+
Sbjct: 34 EDPRPQYII 42


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EDPLPIYIL 9
EDP P YI+
Sbjct: 34 EDPRPQYII 42


>sp|KAE1B_METJA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 EDPLPIYI 8
EDPL +Y+
Sbjct: 121 EDPLTLYV 128


>sp|Y1355_METJA|UNCHARACTERIZED protein MJ1355|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDPLPIYILQ 10
E LPIY+L+
Sbjct: 260 EKTLPIYVLE 269


>sp|APGM_METM5|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C5 /

Query: 2 DPLPIYI 8
DPLPI I
Sbjct: 353 DPLPILI 359


>sp|APGM_METVS|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus vannielii (strain ATCC 35089

Query: 2 DPLPIYI 8
DPLPI I
Sbjct: 353 DPLPIVI 359


>sp|APGM_METM6|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C6 /

Query: 2 DPLPIYI 8
DPLPI I
Sbjct: 353 DPLPIVI 359


>sp|GATA_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 1 EDPLPIYI 8
EDPL +Y+
Sbjct: 405 EDPLTLYL 412


>sp|APGM_METM7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C7 /

Query: 2 DPLPIYI 8
DPLPI I
Sbjct: 353 DPLPIVI 359


>sp|PUR7_HALSA|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 2 DPLPIYILQ 10
DPLP ILQ
Sbjct: 298 DPLPPEILQ 306


>sp|GATA_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 1 EDPLPIYI 8
EDPL +Y+
Sbjct: 405 EDPLTLYL 412


>sp|SYE_THEON|GLUTAMATE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 DPLPIYI 8
DP+P+YI
Sbjct: 417 DPIPMYI 423


>sp|SYH_AERPE|HISTIDINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EDPLPIY 7
++PLPIY
Sbjct: 180 DNPLPIY 186


>sp|GATA_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 1 EDPLPIYI 8
EDPL +Y+
Sbjct: 404 EDPLTLYL 411


>sp|SYE_PYRFU|GLUTAMATE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DPLPIYI 8
DP+P+YI
Sbjct: 418 DPIPMYI 424


>sp|APGM_METST|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosphaera stadtmanae (strain ATCC

Query: 2 DPLPIYI 8
DP+P++I
Sbjct: 356 DPVPVFI 362


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 LPIYILQ 10
LP+Y+LQ
Sbjct: 1118 LPLYLLQ 1124


>sp|SYE_THEKO|GLUTAMATE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DPLPIYI 8
DP+P+Y+
Sbjct: 418 DPIPMYV 424


>sp|CMR6_PYRFU|CRISPR system Cmr subunit Cmr6|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DPLPIYIL 9
DP+PI+ L
Sbjct: 282 DPIPIFFL 289


>sp|RNZ_NATPD|RIBONUCLEASE Z|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EDPLPIYI 8
E+PL +Y+
Sbjct: 83 EEPLSVYV 90


>sp|ENDA_METAC|TRNA-SPLICING endonuclease|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PLPIYILQ 10
PLP+ +LQ
Sbjct: 125 PLPVKLLQ 132


>sp|UPPP_KORCO|UNDECAPRENYL-DIPHOSPHATASE cryptofilum (strain OPF8)

Query: 1 EDPLPIYIL 9
E LP+YIL
Sbjct: 86 ERKLPLYIL 94


>sp|ACDA2_METKA|PUTATIVE acetyl-CoA decarbonylase/synthase complex subunit|Methanopyrus

Query: 1 EDPLPIY 7
E PLP+Y
Sbjct: 100 ETPLPLY 106




130|SequenceR|655|646|AVRSKEDPLP

>sp|Y207_METJA|UNCHARACTERIZED protein MJ0207|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RSKEDPLP 10
RSK DP P
Sbjct: 8 RSKNDPCP 15


>sp|Y878_METJA|UNCHARACTERIZED lipoprotein MJ0878|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VRSKEDPLP 10
+++K+DP+P
Sbjct: 91 LKNKDDPVP 99


>sp|DHQS_METTP|3-DEHYDROQUINATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 VRSKEDPL 9
+RSKED L
Sbjct: 90 IRSKEDEL 97


>sp|Y967_METTH|PUTATIVE HTH-type transcriptional regulatory protein|Methanothermobacter

Query: 1 AVRSKEDPL 9
VRSK +PL
Sbjct: 79 GVRSKTEPL 87


>sp|METK_THEON|S-ADENOSYLMETHIONINE synthase|Thermococcus onnurineus (strain NA1)

Query: 3 RSKEDPLP 10
++KE+P+P
Sbjct: 151 KAKENPIP 158


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain ATCC

Query: 2 VRSKEDPL 9
V++KEDP
Sbjct: 1033 VKAKEDPF 1040


>sp|METK_PYRHO|S-ADENOSYLMETHIONINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RSKEDPLP 10
++KE+P+P
Sbjct: 148 KAKENPIP 155


>sp|IF2P_PYRAB|PROBABLE translation initiation factor IF-2|Pyrococcus abyssi (strain GE5 /

Query: 2 VRSKEDPL 9
V++KEDP
Sbjct: 981 VKAKEDPF 988


>sp|METK_THEGJ|S-ADENOSYLMETHIONINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 RSKEDPLP 10
++KE+P+P
Sbjct: 151 KAKENPIP 158


>sp|METK_PYRAB|S-ADENOSYLMETHIONINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 RSKEDPLP 10
++KE+P+P
Sbjct: 148 KAKENPIP 155


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis (strain

Query: 2 VRSKEDPL 9
V++KEDP
Sbjct: 1133 VKAKEDPF 1140




131|SequenceR|660|651|NAKLIAVRSK

>sp|PUR1_PYRHO|AMIDOPHOSPHORIBOSYLTRANSFERASE horikoshii (strain ATCC 700860

Query: 1 NAKLIAVR 8
N KLIAVR
Sbjct: 171 NGKLIAVR 178




132|SequenceR|665|656|PSKRLNAKLI

>sp|CHED_METBF|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina barkeri

Query: 1 PSKRLNAKLI 10
P KR AKL+
Sbjct: 76 PRKRFEAKLV 85


>sp|RNH2_METVS|RIBONUCLEASE HII|Methanococcus vannielii (strain ATCC 35089

Query: 1 PSKRLNAKLI 10
PSK LN K+I
Sbjct: 16 PSKILNEKII 25


>sp|SYE_SULTO|GLUTAMATE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SKRLNAKLI 10
+K+LNAK+I
Sbjct: 491 AKKLNAKII 499


>sp|Y1401_METJA|PROBABLE ATP-dependent helicase MJ1401|Methanocaldococcus jannaschii (strain

Query: 2 SKRLNAKLI 10
+K+LNAKL+
Sbjct: 380 AKQLNAKLV 388


>sp|CMR3_PYRFU|CRISPR system Cmr subunit Cmr3|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KRLNAKL 9
KRLNAK+
Sbjct: 247 KRLNAKI 253


>sp|LEU3_SACS2|3-ISOPROPYLMALATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SKRLNAKLI 10
SKR+ AKLI
Sbjct: 21 SKRIIAKLI 29




133|SequenceR|670|661|VDKAVPSKRL

>sp|DGGGP_METM7|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C7 /

Query: 2 DKAVPSKRL 10
++ +PSKRL
Sbjct: 72 ERPIPSKRL 80


>sp|Y1739_ARCFU|UNCHARACTERIZED protein AF_1739|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VDKAVPSKRL 10
+D A+P KR+
Sbjct: 32 IDLAIPRKRI 41




134|SequenceR|675|666|LFELDVDKAV

>sp|GLYA_THEKO|SERINE hydroxymethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 FELDVDKA 9
F +DVDKA
Sbjct: 149 FNIDVDKA 156


>sp|GLYA_THEGJ|SERINE hydroxymethyltransferase|Thermococcus gammatolerans (strain DSM

Query: 2 FELDVDKA 9
F +DVDKA
Sbjct: 147 FNIDVDKA 154


>sp|RFCL_ARCFU|REPLICATION factor C large subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LFELDVDKA 9
L ELDVDKA
Sbjct: 381 LKELDVDKA 389


>sp|GLYA_THEON|SERINE hydroxymethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 FELDVDKA 9
F +DVDKA
Sbjct: 149 FNIDVDKA 156


>sp|GLYA_PYRAB|SERINE hydroxymethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 FELDVDKA 9
F +DVDKA
Sbjct: 147 FNIDVDKA 154


>sp|GLYA_PYRFU|SERINE hydroxymethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FELDVDKA 9
F +DVDKA
Sbjct: 147 FNIDVDKA 154


>sp|GLYA_PYRHO|SERINE hydroxymethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 FELDVDKA 9
F +DVDKA
Sbjct: 147 FNIDVDKA 154


>sp|HEM3_IGNH4|PROBABLE porphobilinogen deaminase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LFELDVDKAV 10
LFE +V+KAV
Sbjct: 60 LFEKEVNKAV 69


>sp|HIS4_ARCFU|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Archaeoglobus fulgidus (strain

Query: 1 LFELDVDKAV 10
LFEL VD+ +
Sbjct: 91 LFELGVDRVI 100


>sp|RADA_METS3|DNA repair and recombination protein|Methanobrevibacter smithii (strain

Query: 2 FELDVDKAV 10
FELD+D+ +
Sbjct: 155 FELDIDEVL 163


>sp|RFCL_METHJ|REPLICATION factor C large subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 FELDVDK 8
++LDVDK
Sbjct: 383 YDLDVDK 389


>sp|FWDB_METJA|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanocaldococcus

Query: 2 FELDVDK 8
FEL VDK
Sbjct: 224 FELQVDK 230


>sp|GLYA_HYPBU|SERINE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 4 LDVDKAV 10
+DVDKA+
Sbjct: 159 IDVDKAI 165


>sp|HPRL1_HALJB|HGPRTASE-LIKE protein 1|Halalkalicoccus jeotgali (strain DSM 18796

Query: 3 ELDVDKAV 10
ELDVDK V
Sbjct: 50 ELDVDKIV 57


>sp|GLYA_AERPE|SERINE hydroxymethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 4 LDVDKAV 10
+DVDKAV
Sbjct: 156 VDVDKAV 162


>sp|GLYA_PYRAR|SERINE hydroxymethyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 FELDVDKA 9
F +DVD+A
Sbjct: 147 FNIDVDRA 154


>sp|THIC2_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 ELDVDKAV 10
EL+VDKA+
Sbjct: 76 ELEVDKAL 83


>sp|HEM3_NITMS|PROBABLE porphobilinogen deaminase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 LFELDVDKAV 10
+FE ++D+AV
Sbjct: 57 IFEKEIDRAV 66


>sp|GGGPS_SACI7|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LFELDVDKAV 10
+ E DVDKA+
Sbjct: 237 IIERDVDKAI 246


>sp|GGGPS_SACI3|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.16.27)

Query: 1 LFELDVDKAV 10
+ E DVDKA+
Sbjct: 237 IIERDVDKAI 246


>sp|GGGPS_SACI2|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LFELDVDKAV 10
+ E DVDKA+
Sbjct: 237 IIERDVDKAI 246


>sp|GGGPS_SACI1|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LFELDVDKAV 10
+ E DVDKA+
Sbjct: 237 IIERDVDKAI 246


>sp|GGGPS_SACI6|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LFELDVDKAV 10
+ E DVDKA+
Sbjct: 237 IIERDVDKAI 246


>sp|GGGPS_SACI4|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LFELDVDKAV 10
+ E DVDKA+
Sbjct: 237 IIERDVDKAI 246




135|SequenceR|680|671|NTMKALFELD

>sp|RS5_SULAC|SMALL ribosomal subunit protein uS5|Sulfolobus acidocaldarius (strain

Query: 1 NTMKALFE 8
N+MK LFE
Sbjct: 29 NSMKELFE 36


>sp|TRPB_METLZ|TRYPTOPHAN synthase beta chain|Methanocorpusculum labreanum (strain ATCC

Query: 3 MKALFELD 10
M AL+ELD
Sbjct: 21 MAALYELD 28


>sp|SPSS2_METB6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanoregula boonei (strain DSM 21154

Query: 2 TMKALFELD 10
T +ALFEL+
Sbjct: 8 TFEALFELE 16


>sp|PYRC_SULTO|DIHYDROOROTASE tokodaii (strain DSM 16993

Query: 4 KALFELD 10
KALFE+D
Sbjct: 243 KALFEVD 249


>sp|Y3514_METJA|UNCHARACTERIZED protein MJECL14|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NTMKALFELD 10
N ++ALFE+D
Sbjct: 18 NFVEALFEID 27


>sp|RSMA_METST|PROBABLE ribosomal RNA small subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 NTMKALFE 8
NT++ALF+
Sbjct: 205 NTIRALFQ 212


>sp|PYRK_METBU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanococcoides burtonii

Query: 1 NTMKALFELD 10
N MKAL E D
Sbjct: 187 NVMKALQEKD 196


>sp|TDXH_METTM|PEROXIREDOXIN marburgensis (strain ATCC BAA-927

Query: 1 NTMKALFELD 10
NT++A+F +D
Sbjct: 116 NTVRAVFVVD 125


>sp|TDXH_METTH|PEROXIREDOXIN thermautotrophicus (strain ATCC 29096

Query: 1 NTMKALFELD 10
NT++A+F +D
Sbjct: 116 NTVRAVFVVD 125


>sp|TDXH_METJA|PEROXIREDOXIN jannaschii (strain ATCC 43067

Query: 1 NTMKALFELD 10
NT++A+F +D
Sbjct: 119 NTVRAVFVVD 128


>sp|TDXH_METM5|PEROXIREDOXIN maripaludis (strain C5 /

Query: 1 NTMKALFELD 10
NT++A+F +D
Sbjct: 119 NTVRAVFVVD 128


>sp|TDXH_METVS|PEROXIREDOXIN vannielii (strain ATCC 35089

Query: 1 NTMKALFELD 10
NT++A+F +D
Sbjct: 119 NTVRAVFVVD 128


>sp|TDXH_METMP|PEROXIREDOXIN maripaludis (strain DSM 14266

Query: 1 NTMKALFELD 10
NT++A+F +D
Sbjct: 119 NTVRAVFVVD 128




136|SequenceR|685|676|AGSFGNTMKA

>sp|CCA_METAC|CCA-ADDING enzyme|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GSFGNTMKA 10
GSF NT+KA
Sbjct: 198 GSFENTVKA 206


>sp|THIC_METMJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 SFGNTMKA 10
SFGN M+A
Sbjct: 222 SFGNGMRA 229


>sp|HIS51_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 2 GSFGNTMK 9
G+FG++MK
Sbjct: 47 GNFGDSMK 54


>sp|SYS_HYPBU|SERINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 4 FGNTMKA 10
GNTMKA
Sbjct: 174 LGNTMKA 180


>sp|THIC_METLZ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 SFGNTMKA 10
SFGN M+A
Sbjct: 222 SFGNGMRA 229


>sp|GGGPS_HALWD|GERANYLGERANYLGLYCERYL phosphate synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 AGSFGNTMK 9
+G+FG+T K
Sbjct: 166 SGTFGDTKK 174




137|SequenceR|690|681|IETLDAGSFG

>sp|PFDA_HALMA|PREFOLDIN subunit alpha|Haloarcula marismortui (strain ATCC 43049

Query: 1 IETLDAGS 8
IETLD+GS
Sbjct: 52 IETLDSGS 59


>sp|PFDA_HALLT|PREFOLDIN subunit alpha|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 IETLDAGS 8
IETLD+GS
Sbjct: 47 IETLDSGS 54


>sp|CSG_HALGI|CELL surface glycoprotein|Haloferax gibbonsii

Query: 2 ETLDAGSF 9
ETLDAG +
Sbjct: 490 ETLDAGDY 497


>sp|CARB1_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 1 IETLDAGSFG 10
I +LD G FG
Sbjct: 394 IRSLDIGRFG 403


>sp|NURA_SACS2|DNA double-strand break repair nuclease|Saccharolobus solfataricus

Query: 4 LDAGSFG 10
+D GSFG
Sbjct: 57 IDGGSFG 63


>sp|SODM_HALMA|SUPEROXIDE dismutase [Mn]|Haloarcula marismortui (strain ATCC 43049

Query: 2 ETLDAGSFG 10
E DAG FG
Sbjct: 52 ENRDAGDFG 60




138|SequenceR|695|686|CARQCIETLD

>sp|PANE_THEKO|2-DEHYDROPANTOATE 2-reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 CARQCI 6
CARQCI
Sbjct: 84 CARQCI 89


>sp|Y3523_METJA|UNCHARACTERIZED protein MJECL23|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CARQCIETLD 10
C R+C+ LD
Sbjct: 724 CNRECVYALD 733


>sp|FMDC_METWO|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 1 CARQCIETLD 10
CAR CI D
Sbjct: 303 CARCCISPED 312


>sp|FMDC_METTM|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 1 CARQCIETLD 10
CAR CI D
Sbjct: 303 CARCCISPED 312


>sp|FMDC_METTH|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 1 CARQCIETLD 10
CAR CI D
Sbjct: 303 CARCCISPED 312


>sp|KPYK_AERPE|PYRUVATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 ARQCIETLD 10
ARQ ET+D
Sbjct: 102 ARQFFETID 110




139|SequenceR|700|691|RIALKCARQC

>sp|PANE_THEKO|2-DEHYDROPANTOATE 2-reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RIALKCARQC 10
+ AL+CARQC
Sbjct: 79 KTALECARQC 88


>sp|AROA_PICTO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Picrophilus torridus (strain ATCC

Query: 1 RIALKCARQC 10
RIAL+ AR C
Sbjct: 49 RIALEIARAC 58


>sp|NFI_METTP|ENDONUCLEASE V|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 IALKCAR 8
IAL CAR
Sbjct: 194 IALNCAR 200




140|SequenceR|705|696|SEISERIALK

>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 SEISERIA 8
EISER+A
Sbjct: 523 DEISERVA 530




141|SequenceR|710|701|ERRIESEISE

>sp|NOB1_ARCFU|ENDORIBONUCLEASE Nob1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RRIESEI 8
RRIESEI
Sbjct: 138 RRIESEI 144


>sp|PPM_THEKO|PHOSPHOPENTOMUTASE kodakarensis (strain ATCC BAA-918

Query: 1 ERRIESEISE 10
ER++ SEI E
Sbjct: 380 ERKLSSEIKE 389


>sp|ILVD_METBU|DIHYDROXY-ACID dehydratase|Methanococcoides burtonii (strain DSM 6242

Query: 1 ERRIESEISE 10
ERR+E ++SE
Sbjct: 506 ERRLELKVSE 515


>sp|GUAA_AERPE|GMP synthase [glutamine-hydrolyzing]|Aeropyrum pernix (strain ATCC

Query: 2 RRIESEISE 10
RRI SEI E
Sbjct: 485 RRITSEIPE 493




142|SequenceR|715|706|TQRERERRIE

***** No hits found ******


143|SequenceR|720|711|MASPNTQRER

***** No hits found ******


144|SequenceR|725|716|DEEVEMASPN

>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 1 DEEVEMASPN 10
D+EVE SPN
Sbjct: 997 DDEVEGKSPN 1006


>sp|PSB_METHJ|PROTEASOME subunit beta|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DEEVEMASPN 10
DEE+ + +PN
Sbjct: 200 DEEISVLTPN 209


>sp|GRPE_THEAC|PROTEIN GrpE|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DEEVEMASPN 10
D EVEM+ N
Sbjct: 68 DREVEMSKKN 77


>sp|GLCD2_CALMQ|GLUCOSE 1-dehydrogenase 2|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 EVEMASPN 10
EVEM PN
Sbjct: 264 EVEMLKPN 271


>sp|SYFB_METTH|PHENYLALANINE--TRNA ligase beta subunit|Methanothermobacter thermautotrophicus (strain

Query: 1 DEEVEMASP 9
DE VE+A P
Sbjct: 401 DERVEVAQP 409


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DEEVEMASP 9
DEEV + SP
Sbjct: 653 DEEVALLSP 661




145|SequenceR|730|721|EPVPDDEEVE

>sp|Y1470_METJA|UNCHARACTERIZED protein MJ1470|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PVPDDEE 8
PVP DE+
Sbjct: 520 PVPQDEQ 526


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 EPVPDDEEVE 10
EPVP DE +E
Sbjct: 445 EPVPTDELIE 454


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 EPVPDDEEVE 10
EPVP DE +E
Sbjct: 445 EPVPTDELIE 454


>sp|RSMA_THESM|PROBABLE ribosomal RNA small subunit|Thermococcus sibiricus (strain DSM

Query: 1 EPVPDDEEVE 10
EP P DE++E
Sbjct: 190 EPKPKDEQIE 199


>sp|RL18_CALMQ|LARGE ribosomal subunit protein uL18|Caldivirga maquilingensis (strain

Query: 3 VPDDEEVE 10
VP DEEV+
Sbjct: 131 VPHDEEVQ 138


>sp|RUVB_METB6|HOLLIDAY junction branch migration complex|Methanoregula boonei (strain

Query: 1 EPVPDDEE 8
EPVPDD +
Sbjct: 9 EPVPDDAD 16


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 PVPDDE 7
P+PDDE
Sbjct: 237 PIPDDE 242


>sp|PUR7_METS3|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 VPDDEEVE 10
+PDDE++E
Sbjct: 235 IPDDEKIE 242


>sp|SAMP2_HALVD|SMALL archaeal modifier protein 2|Haloferax volcanii (strain ATCC 29605

Query: 1 EPVPDDEEVE 10
PVP+D+ VE
Sbjct: 44 RPVPEDQSVE 53


>sp|LHRC_METJA|ATP-DEPENDENT helicase Lhr-Core|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VPDDEEV 9
VPDDE+V
Sbjct: 620 VPDDEKV 626


>sp|DSRB_ARCFU|SULFITE reductase, dissimilatory-type subunit beta|Archaeoglobus fulgidus

Query: 2 PVPDDEEVE 10
P+P+DE +
Sbjct: 200 PIPNDEAIR 208


>sp|THS_PYRHO|THERMOSOME subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PDDEEV 9
PDDEEV
Sbjct: 148 PDDEEV 153




146|SequenceR|735|726|HDRRIEPVPD

>sp|MPTN_METMA|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DRRIEPVP 9
DR+IEP P
Sbjct: 170 DRKIEPAP 177


>sp|ARCH_THEGJ|PROTEIN archease|Thermococcus gammatolerans (strain DSM 15229

Query: 1 HDRRIEPVPD 10
HD RIE +PD
Sbjct: 122 HDMRIEKLPD 131


>sp|ARCH_PYRAB|PROTEIN archease|Pyrococcus abyssi (strain GE5 /

Query: 1 HDRRIEPVPD 10
HD +IE +PD
Sbjct: 122 HDMKIEKLPD 131


>sp|ARCH_THEKO|PROTEIN archease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HDRRIEPVPD 10
HD +IE +PD
Sbjct: 122 HDMKIEKLPD 131


>sp|ARCH_PYRFU|PROTEIN archease|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HDRRIEPVPD 10
HD +IE +PD
Sbjct: 122 HDMKIERLPD 131


>sp|ASOR_PYRFU|ALIPHATIC sulfonate oxidoreductase, WOR-like subunit|Pyrococcus furiosus

Query: 1 HDRRIEPV 8
HDR EP+
Sbjct: 262 HDRSSEPI 269


>sp|NADE_METMA|NH(3)-DEPENDENT NAD(+) synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HDRRIEPVPD 10
H R+ PVP+
Sbjct: 245 HKRKAPPVPE 254


>sp|TRUA_ARCFU|TRNA pseudouridine synthase A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HDRRIEPVP 9
H R+EP P
Sbjct: 204 HKERVEPAP 212


>sp|CAS1_METTH|CRISPR-ASSOCIATED endonuclease Cas1|Methanothermobacter thermautotrophicus (strain

Query: 1 HDRRIE 6
HD+RIE
Sbjct: 110 HDKRIE 115


>sp|NADE_METAC|NH(3)-DEPENDENT NAD(+) synthetase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HDRRIEPVPD 10
H R+ PVP+
Sbjct: 245 HKRKSPPVPE 254


>sp|GLMS_PYRAE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrobaculum aerophilum (strain ATCC

Query: 1 HDRRIEPVPD 10
H R ++ VPD
Sbjct: 427 HQRELKAVPD 436


>sp|AATB_META3|A-TYPE ATP synthase subunit B|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 HDRRIEPVPD 10
HD P+PD
Sbjct: 313 HDDITHPIPD 322


>sp|TRPE_METTM|ANTHRANILATE synthase component 1|Methanothermobacter marburgensis (strain ATCC

Query: 1 HDRRIEPVP 9
DRRIE P
Sbjct: 262 EDRRIETFP 270


>sp|AATB_METVS|A-TYPE ATP synthase subunit B|Methanococcus vannielii (strain ATCC 35089

Query: 1 HDRRIEPVPD 10
HD P+PD
Sbjct: 313 HDDITHPIPD 322


>sp|IF6_METST|TRANSLATION initiation factor 6|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 HDRRIEPVPD 10
HD +E +PD
Sbjct: 85 HDINVEIMPD 94


>sp|COFE_METKA|COENZYME F420:L-glutamate ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 RIEPVP 9
RIEPVP
Sbjct: 8 RIEPVP 13


>sp|ARCH_PYRHO|PROTEIN archease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HDRRIEPVPD 10
HD +IE +P+
Sbjct: 122 HDMKIERLPN 131


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DRRIEPVPD 10
DRR EP D
Sbjct: 323 DRRAEPAKD 331




147|SequenceR|740|731|MAEEFHDRRI

>sp|ALF1_HALSA|FRUCTOSE-BISPHOSPHATE aldolase class 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 MAEEFHD 7
MAEEF D
Sbjct: 123 MAEEFRD 129


>sp|ALF1_HALS3|FRUCTOSE-BISPHOSPHATE aldolase class 1|Halobacterium salinarum (strain ATCC 29341

Query: 1 MAEEFHD 7
MAEEF D
Sbjct: 123 MAEEFRD 129


>sp|AATC_HALLT|A-TYPE ATP synthase subunit C|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 AEEFHDRRI 10
A EF DRRI
Sbjct: 128 AGEFDDRRI 136


>sp|SYS2_METBF|TYPE-2 serine--tRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 AEEFHDR 8
AEE HDR
Sbjct: 369 AEELHDR 375


>sp|TRPC_THEAC|INDOLE-3-GLYCEROL phosphate synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 EEFHDRR 9
EE+HDR+
Sbjct: 151 EEYHDRK 157


>sp|Y144_METJA|UNCHARACTERIZED protein MJ0144|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MAEEFHDRRI 10
+AEEF+D+ I
Sbjct: 205 LAEEFNDKII 214


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 EEFHDRRI 10
EEFH R+I
Sbjct: 738 EEFHLRKI 745


>sp|NIKR_HALWD|PUTATIVE nickel-responsive regulator|Haloquadratum walsbyi (strain DSM

Query: 1 MAEEFHDRRI 10
+ EEF D+R+
Sbjct: 39 LLEEFEDKRL 48


>sp|TYW1_PYRHO|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus horikoshii (strain ATCC

Query: 1 MAEEFHDR 8
+ EEFH R
Sbjct: 162 LVEEFHKR 169


>sp|TYW1_PYRAB|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 MAEEFHDR 8
+ EEFH R
Sbjct: 162 LVEEFHKR 169


>sp|HEM1_SACS2|GLUTAMYL-TRNA reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 EFHDRRI 10
+F+DRRI
Sbjct: 180 DFYDRRI 186




148|SequenceR|745|736|RRAFRMAEEF

>sp|KORA_METTM|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter marburgensis (strain ATCC

Query: 2 RAFRMAEEF 10
RAF +AEE+
Sbjct: 153 RAFNLAEEY 161


>sp|KORA_METTH|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter thermautotrophicus

Query: 2 RAFRMAEEF 10
RAF +AEE+
Sbjct: 153 RAFNLAEEY 161


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RRAFRMAEEF 10
RR+ R+AEE
Sbjct: 371 RRSLRLAEEL 380


>sp|ASPD_METBF|L-ASPARTATE dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 1 RRAFRMAEE 9
+R FR+AE+
Sbjct: 105 KRLFRLAEQ 113


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 RRAFRMAEEF 10
RR RM EF
Sbjct: 369 RRTLRMMNEF 378


>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 AFRMAEEF 10
AFRM +EF
Sbjct: 517 AFRMKKEF 524


>sp|GATB_METKA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 RAFRMAEEF 10
RA RMAEE+
Sbjct: 281 RARRMAEEY 289


>sp|OFOA2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 2 RAFRMAEEF 10
+AF AEEF
Sbjct: 402 KAFNWAEEF 410


>sp|PURP_CENSY|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Cenarchaeum symbiosum (strain A)

Query: 3 AFRMAEEF 10
A+RM E+F
Sbjct: 251 AYRMGEDF 258


>sp|CCA_ARCFU|CCA-ADDING enzyme|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RRAFRMAEEF 10
R AF+ +EEF
Sbjct: 317 RSAFKASEEF 326


>sp|TRUA_HALSA|TRNA pseudouridine synthase A|Halobacterium salinarum (strain ATCC

Query: 1 RRAFRMA 7
RRAFR+A
Sbjct: 3 RRAFRVA 9


>sp|TRUA_HALS3|TRNA pseudouridine synthase A|Halobacterium salinarum (strain ATCC

Query: 1 RRAFRMA 7
RRAFR+A
Sbjct: 3 RRAFRVA 9


>sp|AATE_HYPBU|A-TYPE ATP synthase subunit E|Hyperthermus butylicus (strain DSM 5456

Query: 1 RRAFRMAEE 9
RRA R AEE
Sbjct: 57 RRALREAEE 65




149|SequenceR|750|741|NDSVSRRAFR

>sp|ADEC_METAC|ADENINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DSVSRRAFR 10
D+VSRR F+
Sbjct: 10 DAVSRRQFK 18


>sp|ACDB1_PYRFU|ACETATE--COA ligase [ADP-forming] I subunit|Pyrococcus furiosus (strain ATCC

Query: 1 NDSVSRRAFR 10
ND +R AFR
Sbjct: 84 NDEEAREAFR 93


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 1 NDSVSRR 7
NDS++RR
Sbjct: 952 NDSITRR 958


>sp|METXA_HALLT|HOMOSERINE O-acetyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 DSVSRRAFR 10
D+V+RRA R
Sbjct: 203 DAVARRAIR 211




150|SequenceR|755|746|YKRIDNDSVS

>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YKRIDNDSV 9
YKRID D++
Sbjct: 627 YKRIDEDTI 635


>sp|BGAL_HALL2|BETA-GALACTOSIDASE BgaH|Haloferax lucentense (strain DSM 14919

Query: 1 YKRIDNDSVS 10
Y+R NDSV+
Sbjct: 211 YERFSNDSVA 220


>sp|PELO_CENSY|PROTEIN pelota homolog|Cenarchaeum symbiosum (strain A)

Query: 1 YKRIDNDSVS 10
Y++ID+ SVS
Sbjct: 3 YRKIDDRSVS 12


>sp|TIAS_HYPBU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Hyperthermus butylicus (strain

Query: 2 KRIDNDSV 9
+RID DS+
Sbjct: 201 RRIDEDSI 208


>sp|TRPB1_PYRAB|TRYPTOPHAN synthase beta chain 1|Pyrococcus abyssi (strain GE5 /

Query: 1 YKRIDND 7
YKR+ ND
Sbjct: 26 YKRLKND 32


>sp|SYH_KORCO|HISTIDINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 YKRIDNDSV 9
++RI+ND V
Sbjct: 230 FRRIENDKV 238


>sp|SYFB_METTP|PHENYLALANINE--TRNA ligase beta subunit|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 KRIDNDSV 9
+ +DNDSV
Sbjct: 308 RHLDNDSV 315


>sp|MFNA_METVS|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus vannielii

Query: 1 YKRIDNDSV 9
YK+I NDS+
Sbjct: 294 YKKIVNDSM 302


>sp|SRP54_SULAC|SIGNAL recognition particle 54 kDa|Sulfolobus acidocaldarius (strain ATCC

Query: 1 YKRIDNDSV 9
YK +DN S+
Sbjct: 384 YKELDNPSI 392


>sp|TIAS_PYRHO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrococcus horikoshii (strain

Query: 2 KRIDNDSV 9
+R+D DSV
Sbjct: 174 RRVDRDSV 181




151|SequenceR|760|751|QAFMEYKRID

>sp|AROC_THEVO|CHORISMATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 QAFMEYKR 8
Q +MEY+R
Sbjct: 42 QKYMEYRR 49


>sp|AROC_THEAC|CHORISMATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 QAFMEYKR 8
Q +MEY+R
Sbjct: 40 QKYMEYRR 47


>sp|XPD_THEAC|ATP-DEPENDENT DNA helicase XPD|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 QAFMEYKRI 9
Q FMEY RI
Sbjct: 265 QEFMEYMRI 273


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 FMEYKRI 9
FM+YK+I
Sbjct: 215 FMQYKKI 221


>sp|TRF2_THEVO|TRICORN protease-interacting factor F2|Thermoplasma volcanium (strain ATCC

Query: 2 AFMEYKRID 10
FM YK +D
Sbjct: 298 TFMSYKTVD 306


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 2 AFMEYKRID 10
FM YK +D
Sbjct: 298 TFMSYKTVD 306


>sp|IF2B_THEPD|TRANSLATION initiation factor 2 subunit|Thermofilum pendens (strain DSM 2475

Query: 1 QAFMEYKRI 9
QAFM Y+ +
Sbjct: 3 QAFMSYEEL 11


>sp|RFCL_NANEQ|REPLICATION factor C large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 MEYKRID 10
+EYKR+D
Sbjct: 297 VEYKRLD 303


>sp|KPRS_THEVO|RIBOSE-PHOSPHATE pyrophosphokinase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 FMEYKRID 10
F+E KRID
Sbjct: 181 FIEKKRID 188


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 FMEYKRI 9
FM+YK++
Sbjct: 215 FMQYKKV 221


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 FMEYKRI 9
FM+YK++
Sbjct: 215 FMQYKKV 221


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 FMEYKRI 9
FM+YK++
Sbjct: 215 FMQYKKV 221


>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 1 QAFMEYK 7
+AF+EYK
Sbjct: 259 EAFVEYK 265


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 FMEYKRI 9
FM+YK++
Sbjct: 215 FMQYKKV 221




152|SequenceR|765|756|SQQLTQAFME

***** No hits found ******


153|SequenceR|770|761|SGFGRSQQLT

>sp|SYDND_SULTO|ASPARTATE--TRNA(ASP/ASN) ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SGFGRSQQLT 10
S FG SQ+LT
Sbjct: 55 SAFGISQELT 64


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 1 SGFGRSQQLT 10
+GFG +++LT
Sbjct: 623 TGFGANEELT 632


>sp|DNAJ_THEAC|CHAPERONE protein DnaJ|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SGFGRSQQ 8
SGFGR Q+
Sbjct: 110 SGFGRGQR 117


>sp|CDC6C_HALMA|ORC1-TYPE DNA replication protein 3|Haloarcula marismortui (strain ATCC 43049

Query: 2 GFGRSQQLT 10
G GRS++LT
Sbjct: 355 GRGRSRELT 363


>sp|RL37_IGNH4|LARGE ribosomal subunit protein eL37|Ignicoccus hospitalis (strain

Query: 2 GFGRSQQL 9
GFGRS+++
Sbjct: 39 GFGRSKRM 46




154|SequenceR|775|766|SPFRFSGFGR

>sp|SYTC_SULAC|THREONINE--TRNA ligase catalytic subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 2 PFRFSGFG 9
P RFS FG
Sbjct: 253 PIRFSEFG 260


>sp|SYTC_SACS2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 PFRFSGFG 9
P RFS FG
Sbjct: 249 PIRFSEFG 256


>sp|SYTC_SACI7|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 PFRFSGFG 9
P RFS FG
Sbjct: 249 PIRFSEFG 256


>sp|SYTC_SACI6|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 2 PFRFSGFG 9
P RFS FG
Sbjct: 249 PIRFSEFG 256


>sp|SYTC_SACI4|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PFRFSGFG 9
P RFS FG
Sbjct: 249 PIRFSEFG 256


>sp|SYTC_SACI3|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.27)

Query: 2 PFRFSGFG 9
P RFS FG
Sbjct: 249 PIRFSEFG 256


>sp|SYTC_SACI2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain L.S.2.15

Query: 2 PFRFSGFG 9
P RFS FG
Sbjct: 249 PIRFSEFG 256


>sp|SYTC_SACI1|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 PFRFSGFG 9
P RFS FG
Sbjct: 249 PIRFSEFG 256


>sp|SYTC_METS5|THREONINE--TRNA ligase catalytic subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 PFRFSGFG 9
P RFS FG
Sbjct: 245 PIRFSEFG 252


>sp|HTPX_PICTO|PROTEASE HtpX homolog|Picrophilus torridus (strain ATCC 700027

Query: 5 FSGFGR 10
FSGFGR
Sbjct: 176 FSGFGR 181


>sp|DNAJ_THEAC|CHAPERONE protein DnaJ|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 FSGFGR 10
FSGFGR
Sbjct: 109 FSGFGR 114


>sp|PYRK_THEVO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermoplasma volcanium

Query: 2 PFRFSGFGR 10
P FSG GR
Sbjct: 44 PMSFSGLGR 52


>sp|RSMA_THEON|PROBABLE ribosomal RNA small subunit|Thermococcus onnurineus (strain NA1)

Query: 3 FRFSGFG 9
FRF G+G
Sbjct: 121 FRFLGYG 127




155|SequenceR|780|771|GGQNGSPFRF

>sp|AOR_PYRAB|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus abyssi (strain GE5 /

Query: 1 GGQNGSPFRF 10
GG+N PFRF
Sbjct: 369 GGENEPPFRF 378


>sp|AOR_PYRHO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus horikoshii (strain

Query: 1 GGQNGSPFRF 10
GG+N PFRF
Sbjct: 369 GGENEPPFRF 378


>sp|AGLB1_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GGQNGSPF 8
G NGSPF
Sbjct: 211 GAWNGSPF 218


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 4 NGSPFRF 10
NG P RF
Sbjct: 51 NGQPMRF 57


>sp|Y1162_METJA|UNCHARACTERIZED protein MJ1162|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGQNGSPF 8
GG N +PF
Sbjct: 98 GGSNKTPF 105


>sp|DNLI_PYRFU|DNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GQNGSPFRF 10
G+NG P F
Sbjct: 304 GENGRPLPF 312


>sp|PURO_THEKO|IMP cyclohydrolase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GGQNGSPFRF 10
G NG PF F
Sbjct: 11 GLNNGKPFAF 20


>sp|Y2028_ARCFU|UNCHARACTERIZED protein AF_2028|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QNGSPF 8
QNG+PF
Sbjct: 155 QNGAPF 160


>sp|SYK2_METAC|LYSINE--TRNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GGQNGSPFR 9
GG N PF+
Sbjct: 223 GGANARPFK 231




156|SequenceR|785|776|QSPGAGGQNG

>sp|PYRF_METMP|OROTIDINE 5'-phosphate decarboxylase|Methanococcus maripaludis (strain DSM

Query: 2 SPGAGGQNG 10
SPG G Q G
Sbjct: 171 SPGVGAQGG 179


>sp|PYRF_METM6|OROTIDINE 5'-phosphate decarboxylase|Methanococcus maripaludis (strain C6 /

Query: 2 SPGAGGQNG 10
SPG G Q G
Sbjct: 171 SPGVGAQGG 179


>sp|PMK_SACS2|PHOSPHOMEVALONATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SPGAGG 7
SPGAGG
Sbjct: 279 SPGAGG 284


>sp|PYRF_THEVO|OROTIDINE 5'-phosphate decarboxylase|Thermoplasma volcanium (strain ATCC

Query: 2 SPGAGGQNG 10
SPG G Q G
Sbjct: 162 SPGIGAQGG 170


>sp|PYRF_SACS2|OROTIDINE 5'-phosphate decarboxylase|Saccharolobus solfataricus (strain ATCC

Query: 2 SPGAGGQNG 10
SPG G Q G
Sbjct: 163 SPGMGSQGG 171


>sp|PYRF_METTH|OROTIDINE 5'-phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 2 SPGAGGQNG 10
SPG G Q G
Sbjct: 179 SPGVGAQGG 187


>sp|HEM1_HALSA|GLUTAMYL-TRNA reductase|Halobacterium salinarum (strain ATCC 700922

Query: 2 SPGAGGQNG 10
+PGAGG +G
Sbjct: 277 APGAGGHDG 285


>sp|HEM1_HALS3|GLUTAMYL-TRNA reductase|Halobacterium salinarum (strain ATCC 29341

Query: 2 SPGAGGQNG 10
+PGAGG +G
Sbjct: 277 APGAGGHDG 285


>sp|PYRF_METTE|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina thermophila

Query: 2 SPGAGGQNG 10
SPG G Q G
Sbjct: 163 SPGVGAQGG 171


>sp|PYRF_METAC|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina acetivorans (strain ATCC

Query: 2 SPGAGGQNG 10
SPG G Q G
Sbjct: 169 SPGVGAQGG 177


>sp|PYRF_METMA|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina mazei (strain ATCC

Query: 2 SPGAGGQNG 10
SPG G Q G
Sbjct: 169 SPGVGAQGG 177


>sp|PYRI_METMA|ASPARTATE carbamoyltransferase regulatory chain|Methanosarcina mazei

Query: 2 SPGAGGQ 8
+PGAGG+
Sbjct: 49 APGAGGK 55


>sp|DNAG_METPE|DNA primase DnaG|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 QSPGAGGQN 9
Q PGA QN
Sbjct: 290 QKPGASEQN 298


>sp|PYRF_METJA|OROTIDINE 5'-phosphate decarboxylase|Methanocaldococcus jannaschii (strain

Query: 2 SPGAGGQNG 10
+PG G Q G
Sbjct: 165 TPGVGAQGG 173


>sp|PYRF_METBU|OROTIDINE 5'-phosphate decarboxylase|Methanococcoides burtonii (strain DSM

Query: 2 SPGAGGQNG 10
SPG G Q G
Sbjct: 169 SPGVGAQGG 177


>sp|IF2B_SULAC|TRANSLATION initiation factor 2 subunit|Sulfolobus acidocaldarius (strain

Query: 2 SPGAGGQNG 10
+PG+ G+NG
Sbjct: 73 APGSLGENG 81


>sp|PYRF_THEKO|OROTIDINE 5'-phosphate decarboxylase|Thermococcus kodakarensis (strain ATCC

Query: 2 SPGAGGQNG 10
+PG G Q G
Sbjct: 165 TPGVGAQGG 173


>sp|PYRF_METBF|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 SPGAGGQNG 10
SPG G Q G
Sbjct: 169 SPGVGAQGG 177


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PGAGGQNG 10
PG GG+ G
Sbjct: 754 PGGGGEYG 761


>sp|PYRF_METST|OROTIDINE 5'-phosphate decarboxylase|Methanosphaera stadtmanae (strain ATCC

Query: 2 SPGAGGQNG 10
SPG G Q G
Sbjct: 171 SPGVGFQGG 179


>sp|PYRF_PYRFU|OROTIDINE 5'-phosphate decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SPGAGGQNG 10
+PG G Q G
Sbjct: 161 TPGIGAQGG 169


>sp|PYRF_PYRAB|OROTIDINE 5'-phosphate decarboxylase|Pyrococcus abyssi (strain GE5 /

Query: 2 SPGAGGQNG 10
+PG G Q G
Sbjct: 161 TPGIGAQGG 169


>sp|SUCD_METJA|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Methanocaldococcus jannaschii

Query: 2 SPGAGGQN 9
+PG GGQN
Sbjct: 45 TPGKGGQN 52


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 QSPGAGGQNG 10
+SP AGG N
Sbjct: 186 ESPWAGGGNA 195


>sp|FLPA_METMJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanoculleus marisnigri

Query: 2 SPGAGGQNG 10
SPG GG G
Sbjct: 10 SPGEGGVYG 18


>sp|GCK_SULTO|GLYCERATE 2-kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GAGGQNG 10
G GG+NG
Sbjct: 307 GKGGRNG 313


>sp|PYRF_THEAC|OROTIDINE 5'-phosphate decarboxylase|Thermoplasma acidophilum (strain ATCC

Query: 2 SPGAGGQNG 10
SPG G Q G
Sbjct: 163 SPGIGSQGG 171


>sp|GLCS_SACS2|GLUCOSE-BINDING protein GlcS|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PGAGGQNG 10
PGAGG N
Sbjct: 110 PGAGGTNA 117


>sp|PYRF_PYRHO|OROTIDINE 5'-phosphate decarboxylase|Pyrococcus horikoshii (strain ATCC

Query: 2 SPGAGGQNG 10
+PG G Q G
Sbjct: 161 APGIGAQGG 169


>sp|AROB_SULAC|3-DEHYDROQUINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 GAGGQNG 10
G GG+NG
Sbjct: 128 GIGGKNG 134


>sp|DNAJ_THEAC|CHAPERONE protein DnaJ|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 GAGGQN 9
GAGGQN
Sbjct: 75 GAGGQN 80




157|SequenceR|790|781|GGGSGQSPGA

>sp|PYRB_THEVO|ASPARTATE carbamoyltransferase catalytic subunit|Thermoplasma volcanium

Query: 1 GGGSGQSP 8
G GSGQ P
Sbjct: 128 GDGSGQHP 135


>sp|PYRB_THEAC|ASPARTATE carbamoyltransferase catalytic subunit|Thermoplasma acidophilum

Query: 1 GGGSGQSP 8
G GSGQ P
Sbjct: 128 GDGSGQHP 135


>sp|RL29_THEVO|LARGE ribosomal subunit protein uL29|Thermoplasma volcanium (strain

Query: 2 GGSGQSPG 9
GGS SPG
Sbjct: 38 GGSSPSPG 45


>sp|RL29_THEAC|LARGE ribosomal subunit protein uL29|Thermoplasma acidophilum (strain

Query: 2 GGSGQSPG 9
GGS SPG
Sbjct: 40 GGSSPSPG 47


>sp|RL2_IGNH4|LARGE ribosomal subunit protein uL2|Ignicoccus hospitalis (strain KIN4/I

Query: 1 GGGSGQSPG 9
GGG+ QSPG
Sbjct: 206 GGGNHQSPG 214


>sp|RL2_METKA|LARGE ribosomal subunit protein uL2|Methanopyrus kandleri (strain AV19 /

Query: 1 GGGSGQSPG 9
GGG+ QSPG
Sbjct: 206 GGGNHQSPG 214


>sp|Y1870_ARCFU|UNCHARACTERIZED protein AF_1870|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GGGSGQ 6
GGGSG+
Sbjct: 111 GGGSGE 116


>sp|RL2_HYPBU|LARGE ribosomal subunit protein uL2|Hyperthermus butylicus (strain DSM

Query: 1 GGGSGQSP 8
GGGS QSP
Sbjct: 202 GGGSHQSP 209


>sp|AATA_NITMS|A-TYPE ATP synthase subunit A|Nitrosopumilus maritimus (strain SCM1)

Query: 2 GGSGQSPGA 10
GG+G PGA
Sbjct: 227 GGTGSIPGA 235


>sp|ARGC_ARCFU|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GSGQSPGA 10
G+G+SP A
Sbjct: 175 GAGESPSA 182


>sp|RL18_CALMQ|LARGE ribosomal subunit protein uL18|Caldivirga maquilingensis (strain

Query: 2 GGSGQSPGA 10
GG+G +P A
Sbjct: 75 GGTGNTPAA 83


>sp|BACR1_HALWD|BACTERIORHODOPSIN-I walsbyi (strain DSM 16790

Query: 1 GGGSGQSPGA 10
GGGS +P A
Sbjct: 239 GGGSEPTPSA 248


>sp|BACR1_HALWC|BACTERIORHODOPSIN-I walsbyi (strain DSM 16854

Query: 1 GGGSGQSPGA 10
GGGS +P A
Sbjct: 239 GGGSEPTPSA 248




158|SequenceR|795|786|VSGGTGGGSG

>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 3 GGTGGG 8
GGTGGG
Sbjct: 173 GGTGGG 178


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 3 GGTGGG 8
GGTGGG
Sbjct: 175 GGTGGG 180


>sp|CARB1_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 3 GGTGGG 8
GGTGGG
Sbjct: 172 GGTGGG 177


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 3 GGTGGG 8
GGTGGG
Sbjct: 173 GGTGGG 178


>sp|CARB1_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 3 GGTGGG 8
GGTGGG
Sbjct: 173 GGTGGG 178


>sp|Y781_METJA|UNCHARACTERIZED protein MJ0781|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VSGGTGGG 8
++GGTG G
Sbjct: 306 IAGGTGSG 313


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 3 GGTGGG 8
GG+GGG
Sbjct: 175 GGSGGG 180


>sp|ALAXL_PYRHO|ALANYL-TRNA editing protein AlaX-L|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GGTGGGS 9
GG GGG+
Sbjct: 369 GGKGGGT 375


>sp|CETZ_METTP|TUBULIN-LIKE protein CetZ|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VSGGTG 6
VSGGTG
Sbjct: 112 VSGGTG 117


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 3 GGTGGG 8
GG+GGG
Sbjct: 173 GGSGGG 178


>sp|RNZ_SULTO|RIBONUCLEASE Z|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GTGGGS 9
GTGGG+
Sbjct: 8 GTGGGA 13


>sp|RNZ_METS5|RIBONUCLEASE Z|Metallosphaera sedula (strain ATCC 51363

Query: 4 GTGGGS 9
GTGGG+
Sbjct: 8 GTGGGA 13


>sp|Y886_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0886|Methanocaldococcus

Query: 1 VSGGTGGGSG 10
+SGGT G G
Sbjct: 254 LSGGTSAGVG 263


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 VSGGTGGG 8
+ GG+GGG
Sbjct: 854 ILGGSGGG 861


>sp|FPRA_METTM|COENZYME F420H(2) oxidase|Methanothermobacter marburgensis (strain ATCC

Query: 3 GGTGGGSG 10
GG GG +G
Sbjct: 353 GGNGGATG 360


>sp|RECJ2_METJA|EXONUCLEASE RecJ2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GGTGGG 8
GG GGG
Sbjct: 396 GGNGGG 401


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 3 GGTGGG 8
GG GGG
Sbjct: 175 GGAGGG 180


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 3 GGTGGG 8
GG GGG
Sbjct: 175 GGAGGG 180


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 3 GGTGGG 8
GG GGG
Sbjct: 175 GGAGGG 180


>sp|Y865_METJA|PUTATIVE methylthiotransferase MJ0865|Methanocaldococcus jannaschii (strain

Query: 1 VSGGTG 6
+SGGTG
Sbjct: 219 ISGGTG 224


>sp|IF2P_AERPE|PROBABLE translation initiation factor IF-2|Aeropyrum pernix (strain ATCC

Query: 1 VSGGTGGGSG 10
++G GGG G
Sbjct: 1 MAGDKGGGDG 10


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 3 GGTGGG 8
GG GGG
Sbjct: 173 GGAGGG 178


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 3 GGTGGG 8
GG GGG
Sbjct: 173 GGAGGG 178


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VSGGTGGG 8
V GG GGG
Sbjct: 877 VLGGKGGG 884


>sp|Y417_ARCFU|UNCHARACTERIZED protein AF_0417|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SGGTGGGSG 10
+G +GGG+G
Sbjct: 182 AGASGGGTG 190


>sp|TRPF_METTP|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VSGGTGG 7
VSGG GG
Sbjct: 130 VSGGLGG 136


>sp|FPRA_METTH|COENZYME F420H(2) oxidase|Methanothermobacter thermautotrophicus (strain

Query: 3 GGTGGGSG 10
GG GG +G
Sbjct: 353 GGRGGATG 360




159|SequenceR|800|791|NDETYVSGGT

>sp|SYK_HALSA|LYSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 NDETYVSGG 9
N ETY +GG
Sbjct: 154 NTETYANGG 162


>sp|RSMA_SACS2|PROBABLE ribosomal RNA small subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 NDETYVS 7
ND TY+S
Sbjct: 97 NDSTYIS 103


>sp|PCNA_METST|DNA polymerase sliding clamp|Methanosphaera stadtmanae (strain ATCC

Query: 1 NDETYVSGGT 10
+D TY+S GT
Sbjct: 206 SDNTYLSIGT 215


>sp|RNP3_METTH|RIBONUCLEASE P protein component 3|Methanothermobacter thermautotrophicus

Query: 2 DETYVSGG 9
D YVSGG
Sbjct: 94 DVIYVSGG 101


>sp|REP75_PYRAB|REPLICATION initiator protein|Pyrococcus abyssi (strain GE5 /

Query: 3 ETYVSGGT 10
+T++SGG+
Sbjct: 40 DTFISGGS 47




160|SequenceR|806|796|GYLDDDNDETY

>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 3 LDDDNDETY 11
LDDD ETY
Sbjct: 557 LDDDAAETY 565


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 GYLDDDNDE 9
GY+DD+N+E
Sbjct: 2453 GYVDDNNNE 2461


Query: 1 GYLDDDNDE 9
GY+DD+N+
Sbjct: 2260 GYVDDNNNR 2268


>sp|ISF_METTE|IRON-SULFUR flavoprotein|Methanosarcina thermophila

Query: 3 LDDDNDETY 11
+DDD DE Y
Sbjct: 61 IDDDMDEIY 69


>sp|ACDA2_METKA|PUTATIVE acetyl-CoA decarbonylase/synthase complex subunit|Methanopyrus

Query: 2 YLDDDNDETY 11
YLDDD Y
Sbjct: 416 YLDDDGKTLY 425


>sp|MPGS_AERPE|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GYLDDDN 7
GY+D DN
Sbjct: 164 GYVDSDN 170


>sp|IMDH_HALSA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 4 DDDNDETY 11
DDD DE Y
Sbjct: 415 DDDEDEEY 422


>sp|ARGB_METM6|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain C6 /

Query: 1 GYLDDDNDET 10
G +DD ND++
Sbjct: 215 GIMDDINDQS 224


>sp|ACDE1_METTE|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanosarcina

Query: 1 GYLDDDNDETY 11
G+LD D D Y
Sbjct: 74 GFLDKDVDAKY 84


>sp|RRP4_METBU|EXOSOME complex component Rrp4|Methanococcoides burtonii (strain DSM 6242

Query: 3 LDDDNDET 10
LD+D DET
Sbjct: 255 LDNDTDET 262


>sp|SYFA_PYRHO|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GYLDDDN 7
GYL D+N
Sbjct: 298 GYLPDEN 304


>sp|IF1A_PICTO|TRANSLATION initiation factor 1A|Picrophilus torridus (strain ATCC 700027

Query: 3 LDDDNDE 9
+D+DNDE
Sbjct: 1 MDNDNDE 7


>sp|YI48_METSM|INSERTION element ISM1 uncharacterized 48.3|Methanobrevibacter smithii

Query: 2 YLDDDNDE 9
YLDD+N E
Sbjct: 347 YLDDENIE 354


>sp|SYT_THEON|THREONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 YLDDDNDETY 11
Y D+D E Y
Sbjct: 462 YYDEDGKEKY 471


>sp|ARGB_METM5|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain C5 /

Query: 1 GYLDDDNDET 10
G +DD ND++
Sbjct: 215 GIMDDVNDQS 224




THE END