TERA_HUMAN Blast Output
Archaea
1|Sequence|1|10|MASGADSKGD

>sp|DNLI_PYRAY|DNA ligase|Pyrococcus abyssi

Query: 1 MASGADSK 8
MA+G DSK
Sbjct: 71 MATGIDSK 78


>sp|DNLI_PYRAB|DNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 MASGADSK 8
MA+G DSK
Sbjct: 71 MATGIDSK 78


>sp|CAS6B_SACS2|CRISPR-ASSOCIATED endoribonuclease Cas6 2|Saccharolobus solfataricus (strain ATCC

Query: 1 MASGADSKGD 10
+A G DSKG+
Sbjct: 221 VAIGEDSKGN 230




2|Sequence|6|15|DSKGDDLSTA

>sp|SYDND_METLZ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 GDDLSTA 10
GDDLSTA
Sbjct: 298 GDDLSTA 304


>sp|DNAG_THEAC|DNA primase DnaG|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DSKGDDLSTA 10
+SKGDDLS +
Sbjct: 145 NSKGDDLSES 154


>sp|DNAG_THEVO|DNA primase DnaG|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DSKGDDLSTA 10
+SKGDDLS +
Sbjct: 145 NSKGDDLSES 154


>sp|AATC_HALSA|A-TYPE ATP synthase subunit C|Halobacterium salinarum (strain ATCC 700922

Query: 2 SKGDDLSTA 10
+ GD+LSTA
Sbjct: 268 TYGDELSTA 276


>sp|AATC_HALS3|A-TYPE ATP synthase subunit C|Halobacterium salinarum (strain ATCC 29341

Query: 2 SKGDDLSTA 10
+ GD+LSTA
Sbjct: 268 TYGDELSTA 276




3|Sequence|11|20|DLSTAILKQK

>sp|Y1182_METJA|UNCHARACTERIZED protein MJ1182|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DLSTAILKQK 10
DL+ A+LK K
Sbjct: 308 DLNEAVLKYK 317




4|Sequence|16|25|ILKQKNRPNR

>sp|SFSA_METS3|SUGAR fermentation stimulation protein homolog|Methanobrevibacter

Query: 5 KNRPNR 10
KNRPNR
Sbjct: 9 KNRPNR 14


>sp|RTCA_METAC|RNA 3'-terminal phosphate cyclase|Methanosarcina acetivorans (strain

Query: 4 QKNRPN 9
+KNRPN
Sbjct: 36 RKNRPN 41


>sp|Y1178_METJA|UNCHARACTERIZED glycosyltransferase MJ1178|Methanocaldococcus jannaschii (strain

Query: 1 ILKQKNRPN 9
+L +KN PN
Sbjct: 295 LLAEKNNPN 303




5|Sequence|21|30|NRPNRLIVDE

>sp|Y575_METJA|UNCHARACTERIZED protein MJ0575|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NRPNRLIVDE 10
N+P+ LIVD+
Sbjct: 36 NKPDDLIVDD 45


>sp|SFSA_METS3|SUGAR fermentation stimulation protein homolog|Methanobrevibacter

Query: 1 NRPNRLIVD 9
NRPNR I +
Sbjct: 10 NRPNRFIAE 18


>sp|Y500_AERPE|UPF0282 protein APE_0500.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 RPNRLIVD 9
RP RL+VD
Sbjct: 233 RPKRLVVD 240


>sp|Y277_SULAC|UPF0282 protein Saci_0277|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 RPNRLIVD 9
RPN LI+D
Sbjct: 193 RPNFLIID 200


>sp|Y2317_HALSA|PUTATIVE ABC transporter ATP-binding protein|Halobacterium salinarum (strain

Query: 2 RPNRLIVDE 10
RP+ L++DE
Sbjct: 151 RPDHLVLDE 159


>sp|URED_HALWD|UREASE accessory protein UreD|Haloquadratum walsbyi (strain DSM 16790

Query: 1 NRPNRLIVD 9
N+P RL+ D
Sbjct: 46 NKPTRLLSD 54


>sp|Y2030_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 2 RPNRLIVDE 10
RP LI+DE
Sbjct: 161 RPKALILDE 169


>sp|Y1893_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 2 RPNRLIVDE 10
RP LI+DE
Sbjct: 161 RPKALILDE 169


>sp|Y4342_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 RPNRLIVDE 10
RP+ L++DE
Sbjct: 156 RPDYLVLDE 164


>sp|Y1753_AERPE|UPF0200 protein APE_1753.1|Aeropyrum pernix (strain ATCC 700893

Query: 3 PNRLIV 8
PNRLIV
Sbjct: 4 PNRLIV 9


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 4 NRLIVDE 10
NR+IVDE
Sbjct: 567 NRVIVDE 573


>sp|Y1038_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 RPNRLIVDE 10
RP+ L++DE
Sbjct: 156 RPDYLVLDE 164


>sp|GUAAB_SACI7|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 3 PNRLIVDE 10
PN ++VDE
Sbjct: 76 PNLIVVDE 83


>sp|GUAAB_SACI6|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 3 PNRLIVDE 10
PN ++VDE
Sbjct: 76 PNLIVVDE 83


>sp|GUAAB_SACI4|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 3 PNRLIVDE 10
PN ++VDE
Sbjct: 76 PNLIVVDE 83


>sp|GUAAB_SACI3|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 3 PNRLIVDE 10
PN ++VDE
Sbjct: 76 PNLIVVDE 83


>sp|GUAAB_SACI2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 3 PNRLIVDE 10
PN ++VDE
Sbjct: 76 PNLIVVDE 83


>sp|GUAAB_SACI1|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 3 PNRLIVDE 10
PN ++VDE
Sbjct: 76 PNLIVVDE 83


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 3 PNRLIVD 9
PNR++VD
Sbjct: 169 PNRVLVD 175


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 3 PNRLIVD 9
PNR++VD
Sbjct: 169 PNRVLVD 175




6|Sequence|26|35|LIVDEAINED

>sp|AATE_SULAC|A-TYPE ATP synthase subunit E|Sulfolobus acidocaldarius (strain ATCC

Query: 1 LIVDEAINE 9
LIVDEA NE
Sbjct: 32 LIVDEAYNE 40


>sp|RL31_STAMF|LARGE ribosomal subunit protein eL31|Staphylothermus marinus (strain

Query: 1 LIVDEAINE 9
+I+D A+NE
Sbjct: 49 IIIDPAVNE 57


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IVDEAINED 10
IVDE NED
Sbjct: 458 IVDELKNED 466


>sp|T1R2_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 LIVDEAINED 10
L DEAIN+D
Sbjct: 702 LYRDEAINKD 711


>sp|Y1081_ARCFU|UNCHARACTERIZED protein AF_1081|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VDEAINED 10
VDE INED
Sbjct: 43 VDEEINED 50


>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 IVDEAINE 9
++DEAI E
Sbjct: 559 VIDEAITE 566


>sp|RL31_THEON|LARGE ribosomal subunit protein eL31|Thermococcus onnurineus (strain

Query: 1 LIVDEAINE 9
+I+D A+NE
Sbjct: 48 VIIDPAVNE 56


>sp|PELO_PYRAE|PROTEIN pelota homolog|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LIVDEAINED 10
LIVD I ED
Sbjct: 280 LIVDSYIKED 289


>sp|KADA_THESM|ADENYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 2 IVDEAINED 10
I+D A+NED
Sbjct: 187 ILDLAVNED 195




7|Sequence|31|40|AINEDNSVVS

>sp|PYRC_SACS2|DIHYDROOROTASE solfataricus (strain ATCC 35092

Query: 1 AINEDNSVVS 10
AINE ++VVS
Sbjct: 249 AINEVDTVVS 258


>sp|GCSH3_SACS2|PROBABLE glycine cleavage system H|Saccharolobus solfataricus (strain ATCC

Query: 4 EDNSVVS 10
EDNSVVS
Sbjct: 25 EDNSVVS 31


>sp|Y878_METJA|UNCHARACTERIZED lipoprotein MJ0878|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AINEDNSVVS 10
AIN+D SV+
Sbjct: 133 AINDDGSVIG 142




8|Sequence|36|45|NSVVSLSQPK

>sp|Y504_ARCFU|UPF0282 protein AF_0504|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NSVVSLSQP 9
N+VV LS+P
Sbjct: 135 NTVVELSKP 143


>sp|Y2267_ARCFU|PUTATIVE NADH dehydrogenase/NAD(P)H nitroreductase AF_2267|Archaeoglobus

Query: 2 SVVSLSQPK 10
SVVSL PK
Sbjct: 144 SVVSLGYPK 152


>sp|Y1463_THESM|UPF0127 protein TSIB_1463|Thermococcus sibiricus (strain DSM 12597

Query: 1 NSVVSLSQPK 10
N +SL++PK
Sbjct: 139 NGTISLAEPK 148




9|Sequence|41|50|LSQPKMDELQ

>sp|NFI_HALMA|ENDONUCLEASE V|Haloarcula marismortui (strain ATCC 43049

Query: 1 LSQPKMDELQ 10
LSQ +M+ELQ
Sbjct: 16 LSQTEMEELQ 25


>sp|VORA_METTH|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter thermautotrophicus

Query: 1 LSQPKMDEL 9
L+QP +DE
Sbjct: 367 LNQPSLDEF 375


>sp|GLPK_THEKO|GLYCEROL kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 QPKMDE 8
+PKMDE
Sbjct: 462 EPKMDE 467


>sp|RAD50_ARCFU|DNA double-strand break repair Rad50|Archaeoglobus fulgidus (strain

Query: 3 QPKMDELQ 10
+PKMD +Q
Sbjct: 362 KPKMDRMQ 369


>sp|Y1126_METTH|UNCHARACTERIZED protein MTH_1126|Methanothermobacter thermautotrophicus (strain

Query: 2 SQPKMDEL 9
S+P MDEL
Sbjct: 265 SEPGMDEL 272




10|Sequence|46|55|MDELQLFRGD

>sp|OTC_HYPBU|ORNITHINE carbamoyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 DELQLFRGD 10
DELQL RG+
Sbjct: 82 DELQLARGE 90


>sp|Y2166_ARCFU|UNCHARACTERIZED protein AF_2166|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MDELQLFRGD 10
MDEL +RG+
Sbjct: 85 MDELARYRGE 94


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 MDELQLFRGD 10
+DE+Q++R D
Sbjct: 905 VDEIQVYRSD 914


>sp|OTC_ARCFU|ORNITHINE carbamoyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DELQLFRGD 10
DELQL RG+
Sbjct: 75 DELQLGRGE 83


>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 MDELQLFR 8
+++LQLFR
Sbjct: 363 LEQLQLFR 370


>sp|PANB_CENSY|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Cenarchaeum symbiosum (strain A)

Query: 1 MDELQLFRG 9
MDE+ LF G
Sbjct: 48 MDEMCLFTG 56


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 2 DELQLFRGD 10
DE++ F+GD
Sbjct: 168 DEIKDFKGD 176


>sp|Y1574_METJA|UNCHARACTERIZED ATP-dependent helicase MJ1574|Methanocaldococcus jannaschii (strain

Query: 1 MDELQLFRG 9
+DEL ++RG
Sbjct: 180 VDELHVYRG 188


>sp|SRP54_STAMF|SIGNAL recognition particle 54 kDa|Staphylothermus marinus (strain ATCC

Query: 1 MDELQLFR 8
+DEL++FR
Sbjct: 275 IDELEVFR 282


>sp|SEPS_METKA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 ELQLFRGD 10
E++LFRG+
Sbjct: 408 EVELFRGE 415




11|Sequence|51|60|LFRGDTVLLK

>sp|COBQ_THEKO|PROBABLE cobyric acid synthase|Thermococcus kodakarensis (strain ATCC

Query: 2 FRGDTVLLK 10
FRGD LLK
Sbjct: 199 FRGDASLLK 207


>sp|RL3_METMA|LARGE ribosomal subunit protein uL3|Methanosarcina mazei (strain ATCC

Query: 1 LFRGDTVLLK 10
L RGD VL+K
Sbjct: 289 LVRGDYVLIK 298


>sp|RL3_METBF|LARGE ribosomal subunit protein uL3|Methanosarcina barkeri (strain Fusaro

Query: 1 LFRGDTVLLK 10
L RGD VL+K
Sbjct: 289 LVRGDYVLIK 298


>sp|RL3_METAC|LARGE ribosomal subunit protein uL3|Methanosarcina acetivorans (strain

Query: 1 LFRGDTVLLK 10
L RGD +L+K
Sbjct: 289 LVRGDYILIK 298


>sp|MAP2_PYRFU|METHIONINE aminopeptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FRGDTVLLK 10
++GDT +LK
Sbjct: 66 YKGDTTVLK 74


>sp|RL24_PYRAE|LARGE ribosomal subunit protein uL24|Pyrobaculum aerophilum (strain

Query: 3 RGDTVLL 9
RGDTVL+
Sbjct: 49 RGDTVLI 55


>sp|RL24_PYRCJ|LARGE ribosomal subunit protein uL24|Pyrobaculum calidifontis (strain

Query: 3 RGDTVLL 9
RGDTVL+
Sbjct: 49 RGDTVLI 55


>sp|Y636_PYRAB|UPF0179 protein PYRAB06360|Pyrococcus abyssi (strain GE5 /

Query: 1 LFRGDTV 7
LF GDTV
Sbjct: 110 LFEGDTV 116


>sp|COBQ_METBF|PROBABLE cobyric acid synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 FRGDTVLLK 10
FRGD +LK
Sbjct: 198 FRGDLEILK 206


>sp|COBQ_METAC|PROBABLE cobyric acid synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 FRGDTVLLK 10
FRGD +LK
Sbjct: 198 FRGDPEILK 206


>sp|TRKA_ARCFU|TRK system potassium uptake protein|Archaeoglobus fulgidus (strain ATCC

Query: 3 RGDTVL 8
RGDTVL
Sbjct: 190 RGDTVL 195


>sp|GADH_PICTO|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Picrophilus torridus (strain ATCC 700027

Query: 1 LFRGDTVLLK 10
L G+TV+LK
Sbjct: 161 LLTGNTVILK 170


>sp|RL24_PYRAR|LARGE ribosomal subunit protein uL24|Pyrobaculum arsenaticum (strain

Query: 3 RGDTVLL 9
RGDTV++
Sbjct: 49 RGDTVMI 55


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 4 GDTVLLK 10
GDTV++K
Sbjct: 1182 GDTVIIK 1188




12|Sequence|56|65|TVLLKGKKRR

>sp|NNR_METTH|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanothermobacter

Query: 1 TVLLKGK 7
TVLLKG+
Sbjct: 424 TVLLKGR 430


>sp|CDC6_PYRAB|ORC1-TYPE DNA replication protein|Pyrococcus abyssi (strain GE5 /

Query: 1 TVLLKGKKRR 10
TV LKG +RR
Sbjct: 408 TVSLKGGQRR 417




13|Sequence|61|70|GKKRREAVCI

>sp|PUS10_AERPE|TRNA pseudouridine synthase Pus10|Aeropyrum pernix (strain ATCC 700893

Query: 5 REAVCI 10
REAVCI
Sbjct: 416 REAVCI 421


>sp|TIAS_METLZ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocorpusculum labreanum

Query: 4 RREAVCI 10
RRE VC+
Sbjct: 202 RREIVCV 208




14|Sequence|66|75|EAVCIVLSDD

>sp|GLYA_META3|SERINE hydroxymethyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 EAVCIVLSDD 10
E +CI LS+D
Sbjct: 70 ENLCIELSED 79


>sp|MTD_METMJ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanoculleus

Query: 4 CIVLSDD 10
CIV++DD
Sbjct: 89 CIVITDD 95


>sp|TF2B_PYRAE|TRANSCRIPTION initiation factor IIB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EAVCIV 6
EAVCIV
Sbjct: 53 EAVCIV 58


>sp|MTD_METHJ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanospirillum

Query: 4 CIVLSDD 10
C+V++DD
Sbjct: 89 CVVITDD 95


>sp|MTD_METPE|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosphaerula

Query: 4 CIVLSDD 10
C+V++DD
Sbjct: 89 CVVITDD 95




15|Sequence|71|80|VLSDDTCSDE

>sp|SYE_SULTO|GLUTAMATE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 DTCSDE 10
DTCS+E
Sbjct: 195 DTCSEE 200


>sp|THIL_METHJ|THIAMINE-MONOPHOSPHATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VLSDDTCSDE 10
V DTCSD+
Sbjct: 13 VCGSDTCSDD 22


>sp|AGLD_HALVD|GLYCOSYLTRANSFERASE AglD|Haloferax volcanii (strain ATCC 29605

Query: 1 VLSDDTCSDE 10
++++D C DE
Sbjct: 55 IVAEDGCDDE 64


>sp|COBQ_METBU|PROBABLE cobyric acid synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VLSDDTCSDE 10
V DD C+D+
Sbjct: 414 VFGDDGCADD 423




16|Sequence|76|85|TCSDEKIRMN

>sp|Y357_METJA|UNCHARACTERIZED protein MJ0357|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DEKIRMN 10
DEKIR+N
Sbjct: 30 DEKIRLN 36


>sp|TRPE3_HALMA|ANTHRANILATE synthase component 1 3|Haloarcula marismortui (strain ATCC 43049

Query: 2 CSDEKIR 8
CSDEK R
Sbjct: 323 CSDEKER 329


>sp|PYRG_PICTO|CTP synthase|Picrophilus torridus (strain ATCC 700027

Query: 4 DEKIRM 9
DEKIRM
Sbjct: 474 DEKIRM 479


>sp|SYFB_KORCO|PHENYLALANINE--TRNA ligase beta subunit|Korarchaeum cryptofilum (strain OPF8)

Query: 2 CSDEKIRM 9
CSD K+R+
Sbjct: 312 CSDGKVRV 319


>sp|CCA_THEAC|CCA-ADDING enzyme|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 CSDEKIRMN 10
C++E+IR++
Sbjct: 329 CAEERIRVH 337


>sp|AROK_THEAC|SHIKIMATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TCSDEK 6
TCS+EK
Sbjct: 40 TCSEEK 45


>sp|CS2H_ACIS1|CARBON disulfide hydrolase|Acidianus sp. (strain A1-3)

Query: 1 TCSDEKIRM 9
TC DE++ +
Sbjct: 34 TCMDERVHI 42




17|Sequence|81|90|KIRMNRVVRN

>sp|SYFA_THEAC|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KIRMNRVVR 9
KIR R+VR
Sbjct: 169 KIRTERIVR 177


>sp|PCNA_THEVO|DNA polymerase sliding clamp|Thermoplasma volcanium (strain ATCC

Query: 2 IRMNRVVRN 10
IRMN VRN
Sbjct: 2 IRMNISVRN 10




18|Sequence|86|95|RVVRNNLRVR

>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RVVRNNLRV 9
RV+RNN+ +
Sbjct: 525 RVIRNNISI 533


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RVVRNNLRVR 10
RVV N RVR
Sbjct: 667 RVVMENRRVR 676




19|Sequence|91|100|NLRVRLGDVI

>sp|PUR5_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 RVRLGDVI 10
RVR+GDVI
Sbjct: 169 RVRVGDVI 176


>sp|PUR5_METBU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 RVRLGDVI 10
+VRLGDV+
Sbjct: 169 KVRLGDVL 176


>sp|SYP_METTP|PROLINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 NLRVRLGD 8
N+RVRL D
Sbjct: 322 NIRVRLDD 329


>sp|DNLI_METS5|DNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 NLRVRLGDV 9
NLR LGD+
Sbjct: 203 NLRADLGDI 211


>sp|PUR5_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 RVRLGDVI 10
+VR+GDVI
Sbjct: 169 KVRVGDVI 176


>sp|TRUD1_METJA|PROBABLE tRNA pseudouridine synthase D|Methanocaldococcus jannaschii (strain

Query: 1 NLRVRLGDV 9
N ++RLGD+
Sbjct: 128 NRKIRLGDL 136


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 2 LRVRLGDVI 10
+R+R+GD++
Sbjct: 137 VRIRIGDIV 145


>sp|GSA_THEAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 VRLGDVI 10
+RLGD+I
Sbjct: 89 IRLGDII 95


>sp|DPOL_METVO|DNA polymerase|Methanococcus voltae

Query: 4 VRLGDVI 10
VR+GDVI
Sbjct: 753 VRVGDVI 759


>sp|EF2_METMJ|ELONGATION factor 2|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 NLRVRLGDV 9
NL++RL DV
Sbjct: 581 NLKIRLVDV 589


>sp|COFG_METMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NLRVRLGDV 9
NL+ +LGD+
Sbjct: 278 NLQKKLGDI 286


>sp|CPGS_PYRHO|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus horikoshii (strain

Query: 2 LRVRLGDVI 10
LR+ LGD+I
Sbjct: 275 LRISLGDLI 283


>sp|CBIT_SACI7|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 LRVRLGDVI 10
LR+R GD+I
Sbjct: 36 LRIRKGDMI 44


>sp|CBIT_SACI6|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 LRVRLGDVI 10
LR+R GD+I
Sbjct: 36 LRIRKGDMI 44


>sp|CBIT_SACI4|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 LRVRLGDVI 10
LR+R GD+I
Sbjct: 36 LRIRKGDMI 44


>sp|CBIT_SACI3|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 LRVRLGDVI 10
LR+R GD+I
Sbjct: 36 LRIRKGDMI 44


>sp|CBIT_SACI2|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 LRVRLGDVI 10
LR+R GD+I
Sbjct: 36 LRIRKGDMI 44


>sp|PUR5_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 RVRLGDVI 10
+VR+GDV+
Sbjct: 169 KVRVGDVL 176


>sp|CBIT_SACI1|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 LRVRLGDVI 10
LR+R GD+I
Sbjct: 36 LRIRKGDMI 44


>sp|SYH_KORCO|HISTIDINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 NLRVRLGD 8
N RVRL D
Sbjct: 154 NFRVRLND 161


>sp|Y726_METJA|UNCHARACTERIZED protein MJ0726|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VRLGDVI 10
VR+GDV+
Sbjct: 83 VRIGDVV 89


>sp|RS28_HALSA|SMALL ribosomal subunit protein eS28|Halobacterium salinarum (strain

Query: 4 VRLGDVI 10
VR+GDVI
Sbjct: 53 VRVGDVI 59


>sp|RS28_HALS3|SMALL ribosomal subunit protein eS28|Halobacterium salinarum (strain

Query: 4 VRLGDVI 10
VR+GDVI
Sbjct: 53 VRVGDVI 59


>sp|RS28_NATPD|SMALL ribosomal subunit protein eS28|Natronomonas pharaonis (strain

Query: 4 VRLGDVI 10
VR+GDVI
Sbjct: 54 VRVGDVI 60


>sp|MCRW_METTH|METHYL-COENZYME M reductase II operon|Methanothermobacter thermautotrophicus

Query: 2 LRVRLGDVI 10
LRV++G++I
Sbjct: 77 LRVKVGEII 85


>sp|MCRW_METJA|METHYL-COENZYME M reductase II operon|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LRVRLGDVI 10
LRV++G++I
Sbjct: 84 LRVKVGEII 92


>sp|RS28_METS5|SMALL ribosomal subunit protein eS28|Metallosphaera sedula (strain ATCC

Query: 4 VRLGDVI 10
VRLGD++
Sbjct: 58 VRLGDIV 64




20|Sequence|96|105|LGDVISIQPC

>sp|MAP2_THEON|METHIONINE aminopeptidase|Thermococcus onnurineus (strain NA1)

Query: 2 GDVISIQP 9
GDVI+I+P
Sbjct: 182 GDVIAIEP 189


>sp|MTM4_METJA|TYPE II methyltransferase M.MjaIV|Methanocaldococcus jannaschii (strain

Query: 2 GDVISIQP 9
GDVI IQP
Sbjct: 181 GDVIFIQP 188


>sp|IF1A_THEKO|TRANSLATION initiation factor 1A|Thermococcus kodakarensis (strain ATCC

Query: 1 LGDVISIQP 9
+GDV+ +QP
Sbjct: 68 VGDVVIVQP 76


>sp|MAP2_METTH|METHIONINE aminopeptidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 GDVISIQP 9
GDV++I+P
Sbjct: 185 GDVLAIEP 192


>sp|NDRZ_THEAC|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Thermoplasma

Query: 1 LGDVISIQPC 10
+GD+ S PC
Sbjct: 425 VGDIESTNPC 434


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 GDVISIQP 9
GDVI I P
Sbjct: 196 GDVIEINP 203


>sp|MAP2_METJA|METHIONINE aminopeptidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGDVISIQP 9
+GD+++I+P
Sbjct: 182 VGDLVAIEP 190


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 2 GDVISIQPC 10
GD I + PC
Sbjct: 241 GDSIVVAPC 249


>sp|CDC6D_HALMA|ORC1-TYPE DNA replication protein 4|Haloarcula marismortui (strain ATCC 43049

Query: 1 LGDVISIQP 9
LGD+ +QP
Sbjct: 508 LGDIDDVQP 516


>sp|MAP2_THEKO|METHIONINE aminopeptidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GDVISIQP 9
GDV +I+P
Sbjct: 182 GDVFAIEP 189


>sp|MAP2_PYRHO|METHIONINE aminopeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GDVISIQP 9
GDV +I+P
Sbjct: 181 GDVFAIEP 188


>sp|MAP2_PYRFU|METHIONINE aminopeptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GDVISIQP 9
GDV +I+P
Sbjct: 181 GDVFAIEP 188


>sp|MAP2_PYRAB|METHIONINE aminopeptidase|Pyrococcus abyssi (strain GE5 /

Query: 2 GDVISIQP 9
GDV +I+P
Sbjct: 181 GDVFAIEP 188


>sp|SECD_METTH|PROTEIN-EXPORT membrane protein SecD|Methanothermobacter thermautotrophicus

Query: 3 DVISIQP 9
D++S+QP
Sbjct: 123 DIVSVQP 129


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LGDVISIQP 9
LG+V S++P
Sbjct: 440 LGEVYSVKP 448


>sp|RS17_METHJ|SMALL ribosomal subunit protein uS17|Methanospirillum hungatei JF-1

Query: 1 LGDVISIQPC 10
+GD++SI C
Sbjct: 82 VGDMVSIAEC 91


>sp|Y1127_METTP|PUTATIVE nickel insertion protein|Methanothrix thermoacetophila (strain DSM

Query: 2 GDVISIQP 9
G++IS++P
Sbjct: 349 GEIISVKP 356


>sp|IF1A_PYRHO|TRANSLATION initiation factor 1A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LGDVISIQP 9
+GD++ +QP
Sbjct: 65 VGDLVIVQP 73


>sp|IF1A_PYRAB|TRANSLATION initiation factor 1A|Pyrococcus abyssi (strain GE5 /

Query: 1 LGDVISIQP 9
+GD++ +QP
Sbjct: 63 VGDLVIVQP 71




21|Sequence|101|110|SIQPCPDVKY

>sp|HJC_ARCFU|CROSSOVER junction endodeoxyribonuclease Hjc|Archaeoglobus fulgidus (strain

Query: 4 PCPDV 8
PCPD+
Sbjct: 35 PCPDI 39


>sp|LYSY_SULAC|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SIQPCPDVKY 10
+I P PD KY
Sbjct: 280 NIHPYPDPKY 289


>sp|LEUC_CALMQ|3-ISOPROPYLMALATE dehydratase large subunit|Caldivirga maquilingensis (strain ATCC

Query: 2 IQPCPDVKY 10
I P PD KY
Sbjct: 246 ITPDPDAKY 254


>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 4 PCPDVK 9
PCPD K
Sbjct: 367 PCPDEK 372


>sp|TOP6A_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SIQPCPDV 8
SI+P PD+
Sbjct: 185 SIEPTPDL 192


>sp|OFOB2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 2 IQPCP 6
+QPCP
Sbjct: 197 LQPCP 201


>sp|CCA_PYRFU|CCA-ADDING enzyme|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IQPCPDVK 9
I PC DVK
Sbjct: 120 IVPCYDVK 127


>sp|COMC_METJA|L-SULFOLACTATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SIQPCPDVK 9
+I P PD+K
Sbjct: 60 NINPKPDIK 68


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 2 IQPCPDVKY 10
++PC D+ +
Sbjct: 1048 LEPCKDIPF 1056


>sp|OFOB2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 2 IQPCP 6
+QPCP
Sbjct: 194 LQPCP 198


>sp|LEUC1_METKA|3-ISOPROPYLMALATE dehydratase large subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 2 IQPCPDVKY 10
++P PD +Y
Sbjct: 247 VEPDPDARY 255


>sp|FTTA_PYRAB|TRANSCRIPTION termination factor FttA|Pyrococcus abyssi (strain GE5 /

Query: 1 SIQPCPDV 8
SI+P PDV
Sbjct: 68 SIRPDPDV 75


>sp|OFOB_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Sulfolobus sp

Query: 2 IQPCP 6
+QPCP
Sbjct: 194 LQPCP 198


>sp|RS17_SULTO|SMALL ribosomal subunit protein uS17|Sulfurisphaera tokodaii (strain

Query: 2 IQPCPDVK 9
I PC DVK
Sbjct: 81 IPPCLDVK 88




22|Sequence|106|115|PDVKYGKRIH

>sp|MBD_PICTO|MEVALONATE 3,5-bisphosphate decarboxylase|Picrophilus torridus (strain ATCC

Query: 1 PDVKYGKRIH 10
PD+KY K H
Sbjct: 29 PDIKYNKTFH 38


>sp|PYRB_METBU|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcoides burtonii

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 162 DLKYGRTVH 170


>sp|PYRB_HALWD|ASPARTATE carbamoyltransferase catalytic subunit|Haloquadratum walsbyi

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 158 DLKYGRTVH 166


>sp|PYRB_HALSA|ASPARTATE carbamoyltransferase catalytic subunit|Halobacterium salinarum

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 158 DLKYGRTVH 166


>sp|PYRB_METST|ASPARTATE carbamoyltransferase catalytic subunit|Methanosphaera stadtmanae

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 163 DLKYGRTVH 171


>sp|PYRB_METBF|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina barkeri

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 162 DLKYGRTVH 170


>sp|PYRB_HALLT|ASPARTATE carbamoyltransferase catalytic subunit|Halorubrum lacusprofundi

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 158 DLKYGRTVH 166


>sp|PYRB_THEGJ|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus gammatolerans

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 163 DLKYGRTVH 171


>sp|PYRB_METVS|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus vannielii

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 159 DLKYGRTVH 167


>sp|G6PI_METMP|PROBABLE glucose-6-phosphate isomerase|Methanococcus maripaludis (strain DSM

Query: 1 PDVKYGKRI 9
P V+YGK+I
Sbjct: 404 PAVEYGKKI 412


>sp|PYRB_METTH|ASPARTATE carbamoyltransferase catalytic subunit|Methanothermobacter

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 160 DLKYGRTVH 168


>sp|PYRB_METM7|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus maripaludis

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 159 DLKYGRTVH 167


>sp|PYRB_METAR|ASPARTATE carbamoyltransferase catalytic subunit|Methanocella arvoryzae

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 162 DLKYGRTVH 170


>sp|PYRB_METKA|ASPARTATE carbamoyltransferase catalytic subunit|Methanopyrus kandleri

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 163 DLKYGRTVH 171


>sp|PYRB_HALMA|ASPARTATE carbamoyltransferase catalytic subunit|Haloarcula marismortui

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 158 DLKYGRTVH 166


>sp|PURA_HALSA|ADENYLOSUCCINATE synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PDVKYGKRIH 10
PDV+ KR H
Sbjct: 91 PDVRLAKRAH 100


>sp|PURA_HALS3|ADENYLOSUCCINATE synthetase|Halobacterium salinarum (strain ATCC 29341

Query: 1 PDVKYGKRIH 10
PDV+ KR H
Sbjct: 91 PDVRLAKRAH 100


>sp|PYRB_METMP|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus maripaludis

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 159 DLKYGRTVH 167


>sp|PYRB_METM6|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus maripaludis

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 159 DLKYGRTVH 167


>sp|PYRB_METAC|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina acetivorans

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 162 DLKYGRTVH 170


>sp|PYRB_NATPD|ASPARTATE carbamoyltransferase catalytic subunit|Natronomonas pharaonis

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 158 DLKYGRTVH 166


>sp|PYRB_THEON|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus onnurineus

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 163 DLKYGRTVH 171


>sp|PYRB_PYRFU|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus furiosus (strain

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 163 DLKYGRTVH 171


>sp|PYRB_METMA|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina mazei (strain

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 163 DLKYGRTVH 171


>sp|PYRB_PYRAB|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus abyssi (strain

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 163 DLKYGRTVH 171


>sp|PYRB_PYRHO|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus horikoshii

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 163 DLKYGRTVH 171


>sp|PSTB_METBF|PHOSPHATE import ATP-binding protein PstB|Methanosarcina barkeri (strain

Query: 2 DVKYGKRIH 10
+V YG RIH
Sbjct: 112 NVAYGPRIH 120


>sp|PYRB_THEKO|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus kodakarensis

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 163 DLKYGRTVH 171


>sp|PSTB_METMA|PHOSPHATE import ATP-binding protein PstB|Methanosarcina mazei (strain ATCC

Query: 2 DVKYGKRIH 10
+V YG RIH
Sbjct: 112 NVAYGPRIH 120


>sp|PYRB_THEVO|ASPARTATE carbamoyltransferase catalytic subunit|Thermoplasma volcanium

Query: 2 DVKYGKRIH 10
D++YG+ IH
Sbjct: 162 DLRYGRTIH 170


>sp|PYRB_METM5|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus maripaludis

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 159 DLKYGRTVH 167


>sp|PYRB_METTP|ASPARTATE carbamoyltransferase catalytic subunit|Methanothrix

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 160 DLKYGRTVH 168


>sp|PYRB_METJA|ASPARTATE carbamoyltransferase catalytic subunit|Methanocaldococcus

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 159 DLKYGRTVH 167


>sp|PYRB_META3|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus aeolicus

Query: 2 DVKYGKRIH 10
D+KYG+ +H
Sbjct: 159 DLKYGRTVH 167


>sp|GPMA_METB6|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanoregula boonei (strain DSM 21154

Query: 1 PDVKYGKRI 9
P+VK GKRI
Sbjct: 169 PEVKAGKRI 177


>sp|Y280_METAC|UNCHARACTERIZED solute-binding protein MA_0280|Methanosarcina acetivorans (strain

Query: 1 PDVKYG 6
PDV+YG
Sbjct: 149 PDVRYG 154


>sp|PSTB_METAC|PHOSPHATE import ATP-binding protein PstB|Methanosarcina acetivorans (strain

Query: 2 DVKYGKRIH 10
++ YG RIH
Sbjct: 112 NIAYGPRIH 120


>sp|PYRB_THEAC|ASPARTATE carbamoyltransferase catalytic subunit|Thermoplasma acidophilum

Query: 2 DVKYGKRIH 10
D++YG+ IH
Sbjct: 162 DLRYGRTIH 170


>sp|RFCS_PYRFU|REPLICATION factor C small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PDVKYGKRIH 10
PD K +RIH
Sbjct: 222 PDAKIRERIH 231


>sp|PSTB_METHJ|PHOSPHATE import ATP-binding protein PstB|Methanospirillum hungatei JF-1

Query: 2 DVKYGKRIH 10
++ YG RIH
Sbjct: 106 NIAYGPRIH 114


>sp|RFCS_THEKO|REPLICATION factor C small subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 PDVKYGKRIH 10
PD K +RIH
Sbjct: 222 PDAKIRERIH 231


>sp|PSTB_METST|PHOSPHATE import ATP-binding protein PstB|Methanosphaera stadtmanae (strain

Query: 2 DVKYGKRIH 10
+V YG RIH
Sbjct: 105 NVAYGLRIH 113


>sp|PSTB_ARCFU|PHOSPHATE import ATP-binding protein PstB|Archaeoglobus fulgidus (strain ATCC

Query: 2 DVKYGKRIH 10
+V YG R+H
Sbjct: 104 NVAYGPRVH 112


>sp|PSTB_METMP|PHOSPHATE import ATP-binding protein PstB|Methanococcus maripaludis (strain

Query: 2 DVKYGKRIH 10
++ YG RIH
Sbjct: 104 NIAYGPRIH 112


>sp|PYRB_METS3|ASPARTATE carbamoyltransferase catalytic subunit|Methanobrevibacter smithii

Query: 2 DVKYGKRIH 10
D+K+G+ +H
Sbjct: 165 DLKFGRTVH 173


>sp|PURA_NATPD|ADENYLOSUCCINATE synthetase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PDVKYGKRIH 10
PDV+ +R H
Sbjct: 91 PDVRVAERAH 100


>sp|PYRB_ARCFU|ASPARTATE carbamoyltransferase catalytic subunit|Archaeoglobus fulgidus

Query: 2 DVKYGKRIH 10
D+KY + IH
Sbjct: 160 DLKYSRTIH 168


>sp|AATC_PYRAB|A-TYPE ATP synthase subunit C|Pyrococcus abyssi (strain GE5 /

Query: 2 DVKYGKRI 9
D YGKR+
Sbjct: 73 DTDYGKRL 80


>sp|IF2P_METTH|PROBABLE translation initiation factor IF-2|Methanothermobacter

Query: 2 DVKYGKRIH 10
D YGK IH
Sbjct: 533 DAVYGKTIH 541


>sp|TRPB2_METAC|TRYPTOPHAN synthase beta chain 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PDVKYGKRI 9
PD ++G++I
Sbjct: 197 PDTEFGRKI 205


>sp|CBIT_METVS|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 3 VKYGKRI 9
+ YGKRI
Sbjct: 155 ISYGKRI 161


>sp|ENDA_PYRAR|TRNA-SPLICING endonuclease|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 DVKYGKRIH 10
DV++G+R++
Sbjct: 14 DVEFGRRLY 22


>sp|PURA_HALMA|ADENYLOSUCCINATE synthetase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PDVKYGKRIH 10
PDV+ +R H
Sbjct: 91 PDVRIAERAH 100


>sp|TRPB2_METMA|TRYPTOPHAN synthase beta chain 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PDVKYGKRI 9
PD ++G++I
Sbjct: 197 PDTEFGRKI 205


>sp|FTTA_CENSY|TRANSCRIPTION termination factor FttA|Cenarchaeum symbiosum (strain A)

Query: 2 DVKYGKRI 9
D+K+GK I
Sbjct: 360 DIKFGKSI 367


>sp|DPHB_METAC|DIPHTHINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 YGKRIH 10
YGK++H
Sbjct: 50 YGKKVH 55


>sp|TREH_THEAC|TREHALASE acidophilum (strain ATCC 25905

Query: 1 PDVKYGK 7
PD +YGK
Sbjct: 77 PDSEYGK 83


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 KYGKRI 9
KYGKRI
Sbjct: 591 KYGKRI 596


>sp|DPHB_METMA|DIPHTHINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 YGKRIH 10
YGK++H
Sbjct: 50 YGKKVH 55


>sp|PSTB_METTH|PHOSPHATE import ATP-binding protein PstB|Methanothermobacter

Query: 2 DVKYGKRIH 10
+V YG R+H
Sbjct: 106 NVAYGLRVH 114


>sp|TREH_THEVO|TREHALASE volcanium (strain ATCC 51530

Query: 1 PDVKYGK 7
PD +YGK
Sbjct: 119 PDSEYGK 125


>sp|GLMM_METMP|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain DSM 14266

Query: 5 YGKRIH 10
YGK++H
Sbjct: 344 YGKKLH 349


>sp|GSA_METAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocella arvoryzae (strain DSM 22066

Query: 2 DVKYGKRIH 10
+VKYGK I
Sbjct: 91 EVKYGKLIQ 99


>sp|HIS1_METAC|ATP phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 2 DVKYGK 7
D+KYGK
Sbjct: 86 DLKYGK 91


>sp|G1PDH_SACS2|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus solfataricus (strain ATCC

Query: 2 DVKYGKRI 9
D+KYG R+
Sbjct: 218 DIKYGVRM 225


>sp|G1PDH_SACI7|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 DVKYGKRI 9
D+KYG R+
Sbjct: 218 DIKYGVRM 225


>sp|G1PDH_SACI1|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 DVKYGKRI 9
D+KYG R+
Sbjct: 218 DIKYGVRM 225


>sp|G1PDH_SACI6|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain M.16.4 /

Query: 2 DVKYGKRI 9
D+KYG R+
Sbjct: 218 DIKYGVRM 225


>sp|G1PDH_SACI4|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain M.14.25 /

Query: 2 DVKYGKRI 9
D+KYG R+
Sbjct: 218 DIKYGVRM 225


>sp|G1PDH_SACI3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain M.16.27)

Query: 2 DVKYGKRI 9
D+KYG R+
Sbjct: 218 DIKYGVRM 225


>sp|G1PDH_SACI2|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 DVKYGKRI 9
D+KYG R+
Sbjct: 218 DIKYGVRM 225


>sp|PYRB_CENSY|ASPARTATE carbamoyltransferase catalytic subunit|Cenarchaeum symbiosum

Query: 2 DVKYGKRIH 10
D+KYG+ ++
Sbjct: 163 DLKYGRTVY 171


>sp|GLFT_PICTO|GLUTAMATE formimidoyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 2 DVKYGKRI 9
D+K G+RI
Sbjct: 197 DIKIGRRI 204


>sp|Y1455_METJA|UNCHARACTERIZED protein MJ1455|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VKYGKRIH 10
+KYGKR +
Sbjct: 210 LKYGKRFY 217


>sp|HIS8_SACS2|HISTIDINOL-PHOSPHATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DVKYGKRIH 10
D+K G R+H
Sbjct: 44 DIKEGIRLH 52




23|Sequence|111|120|GKRIHVLPID

>sp|FTR_METFV|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanothermus fervidus (strain ATCC 43054

Query: 1 GKRIHVLPI 9
G+++H++PI
Sbjct: 136 GRKVHIIPI 144


>sp|PURA_HALSA|ADENYLOSUCCINATE synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GKRIHVLP 8
G+RIH LP
Sbjct: 359 GERIHTLP 366


>sp|PURA_HALS3|ADENYLOSUCCINATE synthetase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GKRIHVLP 8
G+RIH LP
Sbjct: 359 GERIHTLP 366


>sp|FTR_METBU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GKRIHVLPI 9
G+++HV+P+
Sbjct: 136 GRKMHVIPM 144


>sp|FTR_METTH|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 GKRIHVLPI 9
G++IH +PI
Sbjct: 136 GRKIHSIPI 144


>sp|RRP4_METFV|EXOSOME complex component Rrp4|Methanothermus fervidus (strain ATCC 43054

Query: 1 GKRIHVLPI 9
GKRI V+P+
Sbjct: 46 GKRIEVIPL 54


>sp|ENO_METS5|ENOLASE sedula (strain ATCC 51363

Query: 1 GKRIHVLPI 9
G R H LP+
Sbjct: 133 GARTHTLPV 141


>sp|DPHB_METJA|DIPHTHINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GKRIHVL 7
GK+IHVL
Sbjct: 51 GKKIHVL 57


>sp|RNP3_AERPE|RIBONUCLEASE P protein component 3|Aeropyrum pernix (strain ATCC 700893

Query: 2 KRIHVLPID 10
KR+H++ +D
Sbjct: 96 KRVHIIRVD 104


>sp|Y740_ARCFU|PUTATIVE uncharacterized protein AF_0740|Archaeoglobus fulgidus (strain

Query: 3 RIHVLPID 10
R+HV+P++
Sbjct: 68 RLHVVPVE 75


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 GKRIHVLPID 10
GK I +LP D
Sbjct: 295 GKEIPILPAD 304


>sp|IF5A_PYRAR|TRANSLATION initiation factor 5A|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GKRIHVLPID 10
GKR LP+D
Sbjct: 53 GKRTLSLPVD 62


>sp|MEND_NATPD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GKRIHVLPID 10
G HVLPI+
Sbjct: 498 GGIFHVLPIE 507


>sp|RRP4_METKA|EXOSOME complex component Rrp4|Methanopyrus kandleri (strain AV19 /

Query: 1 GKRIHVLPI 9
G+RI V+P+
Sbjct: 50 GRRIRVIPL 58


>sp|KHSE_THEKO|HOMOSERINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 RIHVLPID 10
R+H +P+D
Sbjct: 150 RVHRIPVD 157


>sp|IF5A_PYRNV|TRANSLATION initiation factor 5A|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GKRIHVLPID 10
GKR LP+D
Sbjct: 53 GKRTLSLPVD 62


>sp|IF5A_PYRAE|TRANSLATION initiation factor 5A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GKRIHVLPID 10
GKR LP+D
Sbjct: 59 GKRTLSLPVD 68


>sp|IF5A_PYRIL|TRANSLATION initiation factor 5A|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GKRIHVLPID 10
GKR LP+D
Sbjct: 53 GKRTLSLPVD 62


>sp|MTAD_PYRHO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KRIHVLPI 9
KR H+LP+
Sbjct: 365 KRSHLLPL 372


>sp|DKFP_METJA|FRUCTOSE-BISPHOSPHATE aldolase/6-deoxy-5-ketofructose 1-phosphate

Query: 1 GKRIHVLPID 10
G+ IH P+D
Sbjct: 270 GRNIHQKPLD 279




24|Sequence|116|125|VLPIDDTVEG

>sp|PHEA_METJA|PREPHENATE dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VLPIDDTVEG 10
V+PI++++EG
Sbjct: 52 VVPIENSIEG 61


>sp|CHEB_HALMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Haloarcula marismortui

Query: 1 VLPIDDTVEG 10
VLPIDD +G
Sbjct: 350 VLPIDDIADG 359


>sp|RL18_THEPD|LARGE ribosomal subunit protein uL18|Thermofilum pendens (strain DSM 2475

Query: 1 VLPIDDTVEG 10
VLP DD V G
Sbjct: 136 VLPEDDRVRG 145


>sp|APGM_METS3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanobrevibacter smithii (strain ATCC

Query: 1 VLPIDDTVEG 10
V+P+DD+VE
Sbjct: 177 VIPLDDSVEA 186


>sp|RL18_PYRNV|LARGE ribosomal subunit protein uL18|Pyrobaculum neutrophilum (strain DSM

Query: 1 VLPIDDTVEG 10
VLP DD V G
Sbjct: 136 VLPEDDRVSG 145


>sp|Y120_METTH|PUTATIVE NADH dehydrogenase/NAD(P)H nitroreductase|Methanothermobacter

Query: 1 VLPIDDTVEG 10
V P++D VEG
Sbjct: 140 VYPLEDRVEG 149


>sp|MTRH_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanocaldococcus jannaschii (strain

Query: 3 PIDDTVEG 10
P+D TVEG
Sbjct: 157 PMDPTVEG 164


>sp|Y737_ARCFU|UNCHARACTERIZED protein AF_0737|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LPIDDTVEG 10
+P+DD EG
Sbjct: 47 VPVDDVAEG 55


>sp|AROA_METM5|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C5 /

Query: 2 LPIDDTVEG 10
LP D T+EG
Sbjct: 230 LPCDYTIEG 238


>sp|AROA_METM7|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C7 /

Query: 2 LPIDDTVEG 10
LP D T+EG
Sbjct: 230 LPCDYTIEG 238


>sp|GSA_METTP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VLPIDDTVEG 10
VLP+D +EG
Sbjct: 220 VLPMDGYLEG 229


>sp|RL18_STAMF|LARGE ribosomal subunit protein uL18|Staphylothermus marinus (strain ATCC

Query: 1 VLPIDDTVEG 10
V+P DD + G
Sbjct: 137 VVPSDDRIRG 146


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 LPIDDTVEG 10
LPI+ VEG
Sbjct: 91 LPIEHKVEG 99


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 LPIDDTVEG 10
LPI+ VEG
Sbjct: 91 LPIEHKVEG 99


>sp|MTRH_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanothermobacter marburgensis

Query: 3 PIDDTVEG 10
P+D TVEG
Sbjct: 157 PMDPTVEG 164


>sp|RL18_METPE|LARGE ribosomal subunit protein uL18|Methanosphaerula palustris (strain

Query: 1 VLPIDDTVEG 10
+LP D+ V+G
Sbjct: 136 ILPADERVKG 145


>sp|RL18_PYRIL|LARGE ribosomal subunit protein uL18|Pyrobaculum islandicum (strain DSM

Query: 1 VLPIDDTVEG 10
++P DD + G
Sbjct: 136 IIPSDDRISG 145


>sp|SEPS_METVS|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 PIDDTVE 9
P++DT+E
Sbjct: 47 PVNDTIE 53


>sp|SEPS_METMP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 PIDDTVE 9
P++DT+E
Sbjct: 47 PVNDTIE 53


>sp|CARA_METVS|CARBAMOYL phosphate synthase small chain|Methanococcus vannielii (strain ATCC

Query: 5 DDTVEG 10
DDTVEG
Sbjct: 312 DDTVEG 317


>sp|SEPS_METM7|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C7 /

Query: 3 PIDDTVE 9
P++DT+E
Sbjct: 47 PVNDTIE 53


>sp|SEPS_METM5|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C5 /

Query: 3 PIDDTVE 9
P++DT+E
Sbjct: 47 PVNDTIE 53


>sp|SEPS_METM6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C6 /

Query: 3 PIDDTVE 9
P++DT+E
Sbjct: 47 PVNDTIE 53


>sp|CARA_METM7|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain C7

Query: 5 DDTVEG 10
DDTVEG
Sbjct: 312 DDTVEG 317


>sp|CARA_METMP|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain

Query: 5 DDTVEG 10
DDTVEG
Sbjct: 312 DDTVEG 317




25|Sequence|121|130|DTVEGITGNL

>sp|RL1_PYRNV|LARGE ribosomal subunit protein uL1|Pyrobaculum neutrophilum (strain

Query: 1 DTVEGITGN 9
D VEG++GN
Sbjct: 87 DQVEGLSGN 95


>sp|RL1_PYRAE|LARGE ribosomal subunit protein uL1|Pyrobaculum aerophilum (strain ATCC

Query: 1 DTVEGITGN 9
D VEG++GN
Sbjct: 87 DQVEGLSGN 95


>sp|AMT3_ARCFU|AMMONIUM transporter Amt3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DTVEGITGNL 10
D V G+TGNL
Sbjct: 65 DDVSGLTGNL 74


>sp|Y1371_METJA|UNCHARACTERIZED methyltransferase MJ1371|Methanocaldococcus jannaschii (strain ATCC

Query: 2 TVEGITGNL 10
V+GITGNL
Sbjct: 185 AVDGITGNL 193


>sp|SYR_METMP|ARGININE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DTVEGITGN 9
D V+G+TGN
Sbjct: 13 DKVKGLTGN 21


>sp|PTH_HALLT|PEPTIDYL-TRNA hydrolase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 DTVEGITGNL 10
DTV+ +TG+L
Sbjct: 100 DTVDRVTGDL 109


>sp|RFCL_METM7|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 DTVEGITGN 9
D V+G++GN
Sbjct: 104 DEVDGLSGN 112


>sp|RFCL_META3|REPLICATION factor C large subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DTVEGITGN 9
D V+G++GN
Sbjct: 103 DEVDGLSGN 111


>sp|UVRB_METST|UVRABC system protein B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 TVEGITGN 9
T+EG+TG+
Sbjct: 35 TLEGVTGS 42


>sp|RFCL_METM6|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 DTVEGITGN 9
D V+G++GN
Sbjct: 104 DEVDGLSGN 112


>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 DTVEGITGN 9
D V+G++GN
Sbjct: 104 DEVDGLSGN 112


>sp|RFCL_METVS|REPLICATION factor C large subunit|Methanococcus vannielii (strain ATCC 35089

Query: 1 DTVEGITGN 9
D V+G++GN
Sbjct: 104 DEVDGLSGN 112


>sp|RFCL_METMP|REPLICATION factor C large subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 DTVEGITGN 9
D V+G++GN
Sbjct: 104 DEVDGLSGN 112


>sp|Y231_METTH|UNCHARACTERIZED methyltransferase MTH_231|Methanothermobacter thermautotrophicus

Query: 4 EGITGNL 10
+GITGNL
Sbjct: 180 DGITGNL 186


>sp|CARA_METVS|CARBAMOYL phosphate synthase small chain|Methanococcus vannielii (strain ATCC

Query: 1 DTVEGIT 7
DTVEGI+
Sbjct: 313 DTVEGIS 319


>sp|SYH_META3|HISTIDINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 TVEGITGNL 10
TVE + GNL
Sbjct: 220 TVEEVIGNL 228




26|Sequence|126|135|ITGNLFEVYL

>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ITGNLFEVY 9
I+GN+F++Y
Sbjct: 510 ISGNVFDMY 518


>sp|RPO11_THEGJ|DNA-DIRECTED RNA polymerase subunit Rpo11|Thermococcus gammatolerans (strain

Query: 3 GNLFEVYL 10
GN FE YL
Sbjct: 10 GNTFEFYL 17


>sp|TRUD_SACS2|PROBABLE tRNA pseudouridine synthase D|Saccharolobus solfataricus (strain

Query: 2 TGNLFEVYL 10
TGN+FE+ L
Sbjct: 132 TGNIFEISL 140


>sp|TRUD_SULTO|PROBABLE tRNA pseudouridine synthase D|Sulfurisphaera tokodaii (strain DSM

Query: 2 TGNLFEV 8
TGN+FE+
Sbjct: 123 TGNIFEI 129


>sp|RPO1C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Archaeoglobus fulgidus (strain ATCC

Query: 2 TGNLFEVY 9
T N++E+Y
Sbjct: 258 TNNIYEIY 265


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 2 TGNLFEVY 9
TG LFE Y
Sbjct: 109 TGRLFEAY 116


>sp|Y2265_METBU|PUTATIVE nickel insertion protein|Methanococcoides burtonii (strain DSM 6242

Query: 1 ITGNLFEVYL 10
+ GNLFE +
Sbjct: 259 VLGNLFETLM 268


>sp|Y761_METBF|PUTATIVE nickel insertion protein|Methanosarcina barkeri (strain Fusaro /

Query: 1 ITGNLFEVYL 10
+ GNLFE L
Sbjct: 261 VLGNLFEELL 270


>sp|Y429_METAC|PUTATIVE nickel insertion protein|Methanosarcina acetivorans (strain ATCC

Query: 1 ITGNLFEVYL 10
+ GNLFE L
Sbjct: 261 VLGNLFEELL 270


>sp|Y1617_METMA|PUTATIVE nickel insertion protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ITGNLFEVYL 10
+ GNLFE L
Sbjct: 261 VLGNLFEELL 270


>sp|TRMY_PYRAE|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrobaculum aerophilum

Query: 1 ITGNLFEVYL 10
ITG + EVY+
Sbjct: 16 ITGGVREVYV 25


>sp|SYH_METTH|HISTIDINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 TGNLFEVYL 10
TG +FE+Y+
Sbjct: 273 TGIVFEIYV 281


>sp|RNZ_NANEQ|RIBONUCLEASE Z|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 GNLFEVY 9
G+LFE+Y
Sbjct: 268 GSLFEIY 274




27|Sequence|131|140|FEVYLKPYFL

>sp|SYDND_METMJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FEVYLKPY 8
FE YLKP+
Sbjct: 380 FEFYLKPF 387


>sp|RL30_PYRNV|LARGE ribosomal subunit protein uL30|Pyrobaculum neutrophilum (strain DSM

Query: 4 YLKPYF 9
YLKP+F
Sbjct: 133 YLKPFF 138


>sp|RL30_PYRAE|LARGE ribosomal subunit protein uL30|Pyrobaculum aerophilum (strain ATCC

Query: 4 YLKPYF 9
YLKP+F
Sbjct: 136 YLKPFF 141


>sp|RL30_PYRCJ|LARGE ribosomal subunit protein uL30|Pyrobaculum calidifontis (strain DSM

Query: 4 YLKPYF 9
YLKP+F
Sbjct: 137 YLKPFF 142


>sp|RL30_PYRIL|LARGE ribosomal subunit protein uL30|Pyrobaculum islandicum (strain DSM

Query: 4 YLKPYF 9
YLKP+F
Sbjct: 135 YLKPFF 140


>sp|SYDND_METLZ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 FEVYLKPY 8
FE YL P+
Sbjct: 380 FEFYLNPF 387


>sp|AATC_HALSA|A-TYPE ATP synthase subunit C|Halobacterium salinarum (strain ATCC 700922

Query: 1 FEVYLKPYF 9
F+ YL+P F
Sbjct: 157 FDTYLEPAF 165


>sp|AATC_HALS3|A-TYPE ATP synthase subunit C|Halobacterium salinarum (strain ATCC 29341

Query: 1 FEVYLKPYF 9
F+ YL+P F
Sbjct: 157 FDTYLEPAF 165


>sp|CDC6C_HALMA|ORC1-TYPE DNA replication protein 3|Haloarcula marismortui (strain ATCC 43049

Query: 2 EVYLKPY 8
EVY PY
Sbjct: 203 EVYFNPY 209


>sp|SYFB_THESM|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus sibiricus (strain DSM 12597

Query: 1 FEVYLKPYF 9
FE++L+P++
Sbjct: 547 FEIFLRPFY 555


>sp|SYDND_METHJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 FEVYLKPY 8
FE YL P+
Sbjct: 381 FEFYLNPF 388


>sp|RPO1C_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma volcanium (strain ATCC

Query: 3 VYLKPYF 9
+YLKP F
Sbjct: 237 IYLKPEF 243


>sp|Y452_PYRAB|UNCHARACTERIZED lipoprotein PYRAB04520|Pyrococcus abyssi (strain GE5 /

Query: 2 EVYLKPY 8
E Y+KPY
Sbjct: 348 EKYIKPY 354


>sp|SYFB_PYRFU|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FEVYLKPYF 9
FE++LKP +
Sbjct: 547 FEIFLKPLY 555


>sp|Y1714_PYRHO|UNCHARACTERIZED lipoprotein PH1714|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EVYLKPY 8
E Y+KPY
Sbjct: 349 EKYIKPY 355


>sp|RL30_PYRAR|LARGE ribosomal subunit protein uL30|Pyrobaculum arsenaticum (strain DSM

Query: 4 YLKPYF 9
YLKP+F
Sbjct: 134 YLKPFF 139


>sp|G3PP_METKA|GLYCERALDEHYDE 3-phosphate phosphatase|Methanopyrus kandleri (strain AV19 /

Query: 4 YLKPY 8
YLKPY
Sbjct: 94 YLKPY 98


>sp|SYFB_THEON|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus onnurineus (strain NA1)

Query: 1 FEVYLKPYF 9
FEV+L+P +
Sbjct: 559 FEVFLRPLY 567


>sp|GCSPA_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 4 YLKPYF 9
YLKP+F
Sbjct: 410 YLKPHF 415


>sp|SYG_THESM|GLYCINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 FEVYLKPY 8
FE Y+ PY
Sbjct: 148 FETYIGPY 155


>sp|SYG_PYRHO|GLYCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FEVYLKPY 8
FE Y+ PY
Sbjct: 148 FETYIGPY 155


>sp|SYG_PYRAB|GLYCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 FEVYLKPY 8
FE Y+ PY
Sbjct: 148 FETYIGPY 155


>sp|SYG_PYRFU|GLYCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FEVYLKPY 8
FE Y+ PY
Sbjct: 146 FETYIGPY 153


>sp|Y1800_ARCFU|PUTATIVE transport protein AF_1800|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EVYLKPYFL 10
E+ L+PYF+
Sbjct: 273 ELILRPYFV 281




28|Sequence|136|145|KPYFLEAYRP

>sp|Y1526_METJA|UPF0280 protein MJ1526|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PYFLEAYRP 10
PYFL +Y P
Sbjct: 46 PYFLTSYFP 54


>sp|GCSPA_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 KPYFLEAYRP 10
KP FL++Y P
Sbjct: 81 KPEFLDSYTP 90


>sp|HPRT_METMA|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC

Query: 1 KPYFLEA 7
+PYFLE
Sbjct: 85 RPYFLEG 91


>sp|HPRT_METBF|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KPYFLEA 7
+PYFLE
Sbjct: 86 RPYFLEG 92


>sp|HPRT_METAC|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 KPYFLEA 7
+PYFLE
Sbjct: 85 RPYFLEG 91


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 KPYFLEAYR 9
KP+ LE YR
Sbjct: 6 KPFDLEGYR 14


>sp|PANB_SULAC|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 PYFLEAY 8
PYF +AY
Sbjct: 228 PYFAKAY 234


>sp|PURL_IGNH4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 FLEAYR 9
FLEAYR
Sbjct: 455 FLEAYR 460


>sp|Y1322_METST|UPF0280 protein Msp_1322|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 PYFLEAYRP 10
P FL++Y P
Sbjct: 47 PNFLKSYTP 55


>sp|ATGT_META3|TRNA-GUANINE(15) transglycosylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 PYFLEAYR 9
P LEAYR
Sbjct: 341 PKLLEAYR 348


>sp|TRUA_PYRCJ|TRNA pseudouridine synthase A|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 YFLEAYR 9
YFLE YR
Sbjct: 229 YFLEKYR 235


>sp|TREZ_SACS2|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PYFLEAYR 9
PYF E Y+
Sbjct: 208 PYFSEKYK 215




29|Sequence|141|150|EAYRPIRKGD

>sp|Y1942_ARCFU|UNCHARACTERIZED protein AF_1942|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EAYRPIRKGD 10
EAY+P+R GD
Sbjct: 29 EAYKPVRVGD 38


>sp|HTPX_PYRHO|PROTEASE HtpX homolog|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 YRPIRKGD 10
YRP+R+G+
Sbjct: 237 YRPLRRGN 244


>sp|HTPX_PYRAB|PROTEASE HtpX homolog|Pyrococcus abyssi (strain GE5 /

Query: 3 YRPIRKGD 10
YRP+R+G+
Sbjct: 237 YRPLRRGN 244


>sp|HTPX_THEKO|PROTEASE HtpX homolog|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 YRPIRKGD 10
YRP+R+G+
Sbjct: 238 YRPMREGN 245


>sp|HTPX_THEGJ|PROTEASE HtpX homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 3 YRPIRKGD 10
YRP+R+G+
Sbjct: 237 YRPMREGN 244


>sp|SYC_THEON|CYSTEINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 EAYRPIRKGD 10
E +RP+R+G+
Sbjct: 14 EEFRPLREGE 23


>sp|RLME_THEVO|RIBOSOMAL RNA large subunit methyltransferase|Thermoplasma volcanium

Query: 3 YRPIRKGD 10
YR +RKGD
Sbjct: 33 YRVVRKGD 40


>sp|Y683_METJA|UNCHARACTERIZED protein MJ0683|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EAYRPIRK 8
+AYRPI K
Sbjct: 85 DAYRPIEK 92


>sp|HTPX_PYRFU|PROTEASE HtpX homolog|Pyrococcus furiosus (strain ATCC 43587

Query: 3 YRPIRKGD 10
YRP++ G+
Sbjct: 237 YRPLKNGN 244


>sp|RL24_METS3|LARGE ribosomal subunit protein uL24|Methanobrevibacter smithii (strain

Query: 5 PIRKGD 10
PIRKGD
Sbjct: 42 PIRKGD 47


>sp|RL24_KORCO|LARGE ribosomal subunit protein uL24|Korarchaeum cryptofilum (strain

Query: 5 PIRKGD 10
PIRKGD
Sbjct: 45 PIRKGD 50


>sp|AROD_METHJ|3-DEHYDROQUINATE dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 RPIRKGD 10
RP+R GD
Sbjct: 233 RPVRSGD 239


>sp|CDC61_METTH|ORC1-TYPE DNA replication protein 1|Methanothermobacter thermautotrophicus

Query: 1 EAYRPIRKGD 10
E Y+ I KGD
Sbjct: 320 EVYKEIAKGD 329


>sp|SYC_PYRFU|CYSTEINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EAYRPIRKGD 10
E ++P+R+G+
Sbjct: 13 EEFKPLREGE 22


>sp|SYC_THEKO|CYSTEINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EAYRPIRKGD 10
E ++P+R+G+
Sbjct: 14 EEFKPLREGE 23


>sp|RL24_STAMF|LARGE ribosomal subunit protein uL24|Staphylothermus marinus (strain

Query: 5 PIRKGD 10
P+RKGD
Sbjct: 46 PVRKGD 51


>sp|RL24_AERPE|LARGE ribosomal subunit protein uL24|Aeropyrum pernix (strain ATCC

Query: 5 PIRKGD 10
P+RKGD
Sbjct: 47 PVRKGD 52


>sp|RS2_SACS2|SMALL ribosomal subunit protein uS2|Saccharolobus solfataricus (strain

Query: 2 AYRPIRK 8
AYRP++K
Sbjct: 106 AYRPVQK 112


>sp|RL24_METJA|LARGE ribosomal subunit protein uL24|Methanocaldococcus jannaschii

Query: 5 PIRKGD 10
P+RKGD
Sbjct: 46 PVRKGD 51


>sp|RFCS_METAC|REPLICATION factor C small subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 EAYRPIR 7
E YRP+R
Sbjct: 17 EKYRPVR 23


>sp|ATGT_METJA|TRNA-GUANINE(15) transglycosylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EAYRPIRK 8
EAYR +RK
Sbjct: 346 EAYRVVRK 353


>sp|RFCS_METMA|REPLICATION factor C small subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EAYRPIR 7
E YRP+R
Sbjct: 17 EKYRPVR 23


>sp|RL24_IGNH4|LARGE ribosomal subunit protein uL24|Ignicoccus hospitalis (strain

Query: 5 PIRKGD 10
P+RKGD
Sbjct: 46 PVRKGD 51


>sp|RFCS_METBF|REPLICATION factor C small subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 EAYRPIR 7
E YRP+R
Sbjct: 13 EKYRPVR 19


>sp|RFCL_THEPD|REPLICATION factor C large subunit|Thermofilum pendens (strain DSM 2475

Query: 1 EAYRPIRKGD 10
E YRP R D
Sbjct: 13 EKYRPARIAD 22


>sp|VORA_PYRFU|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus furiosus (strain ATCC

Query: 3 YRPIRK 8
Y+PIRK
Sbjct: 3 YKPIRK 8


>sp|RLME_METMA|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina mazei (strain

Query: 5 PIRKGD 10
P+RKGD
Sbjct: 196 PLRKGD 201


>sp|RLME_METBF|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina barkeri (strain

Query: 5 PIRKGD 10
P+RKGD
Sbjct: 196 PLRKGD 201


>sp|RL24_METTH|LARGE ribosomal subunit protein uL24|Methanothermobacter

Query: 5 PIRKGD 10
P+RKGD
Sbjct: 42 PLRKGD 47


>sp|MAAL_HALMA|METHYLASPARTATE ammonia-lyase|Haloarcula marismortui (strain ATCC 43049

Query: 1 EAYRPIRKG 9
E YRP+ +G
Sbjct: 87 EKYRPVVEG 95


>sp|Y1648_AERPE|UNCHARACTERIZED protein APE_1648.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 EAYRPIRKG 9
EAYR + KG
Sbjct: 161 EAYRGMEKG 169


>sp|LEU1_METKA|PROBABLE 2-isopropylmalate synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 EAYRPIRKGD 10
E Y PIR D
Sbjct: 298 ETYEPIRPED 307




30|Sequence|146|155|IRKGDIFLVR

>sp|GPMI1_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 IRKGDIF 7
IRKGD F
Sbjct: 91 IRKGDFF 97


>sp|ACDB_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit beta|Archaeoglobus

Query: 1 IRKGDIFL 8
IRKGD+++
Sbjct: 38 IRKGDMYV 45


>sp|UDGA_PYRAE|TYPE-4 uracil-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IRKGDIFL 8
+R+GD+F+
Sbjct: 71 VRRGDVFI 78


>sp|RS14Z_METMA|SMALL ribosomal subunit protein uS14|Methanosarcina mazei (strain ATCC

Query: 1 IRKGDIFLVR 10
+RK DI+L R
Sbjct: 25 VRKYDIYLCR 34


>sp|Y289_METJA|UNCHARACTERIZED protein MJ0289|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IRKGDIFL 8
I+KG IFL
Sbjct: 187 IKKGKIFL 194


>sp|URE1_NATPD|UREASE subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IRKGDI 6
IRKGDI
Sbjct: 85 IRKGDI 90


>sp|EF1A_CALMQ|ELONGATION factor 1-alpha|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 IRKGDIFLVR 10
I++GD+ +VR
Sbjct: 388 IKRGDVAMVR 397


>sp|MVK_ARCFU|MEVALONATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IRKGDIFLVR 10
+RK D FL+R
Sbjct: 36 VRKSDRFLIR 45


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IRKGDI 6
IRKGDI
Sbjct: 589 IRKGDI 594


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 2 RKGDIFLV 9
R GD+FL+
Sbjct: 186 RPGDVFLL 193


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 2 RKGDIFLV 9
R GD+FL+
Sbjct: 186 RPGDVFLL 193


>sp|KDPB_THEAC|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 IRKGDIFLV 9
+RKGDI +V
Sbjct: 117 LRKGDIIVV 125


>sp|RLME_METMA|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina mazei (strain

Query: 1 IRKGDIFLV 9
+RKGD F+V
Sbjct: 197 LRKGDKFVV 205


>sp|RLME_METBF|RIBOSOMAL RNA large subunit methyltransferase|Methanosarcina barkeri (strain

Query: 1 IRKGDIFLV 9
+RKGD F+V
Sbjct: 197 LRKGDKFVV 205


>sp|Y4032_METAC|UPF0228 protein MA_4032|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IRKGDIFLV 9
+RKGD +++
Sbjct: 118 VRKGDYYVI 126


>sp|PELO_METM7|PROTEIN pelota homolog|Methanococcus maripaludis (strain C7 /

Query: 3 KGDIFLVR 10
+ DIFLVR
Sbjct: 143 EADIFLVR 150


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 1 IRKGDIFLV 9
+RKGD F++
Sbjct: 538 LRKGDTFVL 546


>sp|CBIT_SACI7|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 IRKGDIFL 8
IRKGD+ L
Sbjct: 38 IRKGDMIL 45


>sp|CBIT_SACI6|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 IRKGDIFL 8
IRKGD+ L
Sbjct: 38 IRKGDMIL 45


>sp|CBIT_SACI4|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 IRKGDIFL 8
IRKGD+ L
Sbjct: 38 IRKGDMIL 45


>sp|CBIT_SACI3|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 IRKGDIFL 8
IRKGD+ L
Sbjct: 38 IRKGDMIL 45


>sp|CBIT_SACI2|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 IRKGDIFL 8
IRKGD+ L
Sbjct: 38 IRKGDMIL 45


>sp|CBIT_SACI1|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 IRKGDIFL 8
IRKGD+ L
Sbjct: 38 IRKGDMIL 45


>sp|PELO_METM6|PROTEIN pelota homolog|Methanococcus maripaludis (strain C6 /

Query: 3 KGDIFLVR 10
+ DIFLVR
Sbjct: 143 EADIFLVR 150


>sp|PELO_METM5|PROTEIN pelota homolog|Methanococcus maripaludis (strain C5 /

Query: 3 KGDIFLVR 10
+ DIFLVR
Sbjct: 143 EADIFLVR 150


>sp|RS14Z_METAC|SMALL ribosomal subunit protein uS14|Methanosarcina acetivorans (strain

Query: 1 IRKGDIFLVR 10
+RK DI+L R
Sbjct: 25 VRKYDIYLCR 34


>sp|PELO_METMP|PROTEIN pelota homolog|Methanococcus maripaludis (strain DSM 14266

Query: 3 KGDIFLVR 10
+ DIFLVR
Sbjct: 143 EADIFLVR 150


>sp|PELO_DESA1|PROTEIN pelota homolog|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 IRKGDIFLVR 10
+RKGDI R
Sbjct: 30 LRKGDIVYAR 39


>sp|RS14Z_METBF|SMALL ribosomal subunit protein uS14|Methanosarcina barkeri (strain

Query: 1 IRKGDIFLVR 10
+RK DI+L R
Sbjct: 25 VRKYDIYLCR 34


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain ATCC

Query: 1 IRKGDIFLVR 10
+ GDI L+R
Sbjct: 643 VESGDIVLIR 652


>sp|MAP2_PYRAB|METHIONINE aminopeptidase|Pyrococcus abyssi (strain GE5 /

Query: 1 IRKGDIFLV 9
+R+GD+F +
Sbjct: 178 LREGDVFAI 186




31|Sequence|151|160|IFLVRGGMRA

>sp|VHUG_METJA|F420-NON-REDUCING hydrogenase vhu subunit G|Methanocaldococcus jannaschii (strain

Query: 1 IFLVRGGMR 9
+FLV GG+R
Sbjct: 57 VFLVEGGIR 65


>sp|Y052_METJA|UNCHARACTERIZED protein MJ0052|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IFLVRGGMRA 10
+F RGGMR+
Sbjct: 183 VFCARGGMRS 192


>sp|RFCL_METMA|REPLICATION factor C large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 RGGMRA 10
RGGMRA
Sbjct: 124 RGGMRA 129


>sp|RFCL_METBF|REPLICATION factor C large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 5 RGGMRA 10
RGGMRA
Sbjct: 119 RGGMRA 124


>sp|RFCL_METAC|REPLICATION factor C large subunit|Methanosarcina acetivorans (strain ATCC

Query: 5 RGGMRA 10
RGGMRA
Sbjct: 124 RGGMRA 129


>sp|VHUG_METVO|F420-NON-REDUCING hydrogenase vhu subunit G|Methanococcus voltae

Query: 1 IFLVRGGMR 9
+FL+ GG R
Sbjct: 55 VFLIEGGAR 63


>sp|RFCL_METTP|REPLICATION factor C large subunit|Methanothrix thermoacetophila (strain DSM

Query: 2 FLVRGGMRA 10
FL+ GG+RA
Sbjct: 306 FLMTGGVRA 314




32|Sequence|156|165|GGMRAVEFKV

>sp|RFCL_METTP|REPLICATION factor C large subunit|Methanothrix thermoacetophila (strain DSM

Query: 1 GGMRAVEFKV 10
GG+RAV KV
Sbjct: 310 GGVRAVSSKV 319


>sp|TNAA_HALSA|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GGMRAVEF 8
GG+RAVE
Sbjct: 371 GGVRAVEL 378


>sp|TNAA_HALS3|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GGMRAVEF 8
GG+RAVE
Sbjct: 371 GGVRAVEL 378


>sp|Y558_METJA|UNCHARACTERIZED protein MJ0558|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGMRAVEFKV 10
GG RAV+F +
Sbjct: 168 GGSRAVDFNL 177


>sp|Y2215_HALMD|PUTATIVE lipoprotein Hmuk_2215|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 GGMRAVEFKV 10
G RAVEF V
Sbjct: 94 AGGRAVEFSV 103


>sp|SYFA_THESM|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus sibiricus (strain DSM 12597

Query: 1 GGMRAVEFK 9
GG + VEFK
Sbjct: 216 GGWKNVEFK 224


>sp|AROE_METKA|SHIKIMATE dehydrogenase (NADP(+))|Methanopyrus kandleri (strain AV19 /

Query: 1 GGMRAVEFKV 10
G RAV FK+
Sbjct: 139 GAARAVSFKL 148




33|Sequence|161|170|VEFKVVETDP

>sp|RS6E_METHJ|SMALL ribosomal subunit protein eS6|Methanospirillum hungatei JF-1

Query: 1 VEFKVVETDP 10
V+FKVV +DP
Sbjct: 2 VDFKVVLSDP 11


>sp|RS6E_METLZ|SMALL ribosomal subunit protein eS6|Methanocorpusculum labreanum

Query: 1 VEFKVVETDP 10
V+FKVV +DP
Sbjct: 2 VDFKVVLSDP 11


>sp|NADE_HALSA|NH(3)-DEPENDENT NAD(+) synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VEFKVVETDP 10
+E+ VVE DP
Sbjct: 95 IEYDVVEIDP 104


>sp|NADE_HALS3|NH(3)-DEPENDENT NAD(+) synthetase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VEFKVVETDP 10
+E+ VVE DP
Sbjct: 95 IEYDVVEIDP 104


>sp|RS6E_METB6|SMALL ribosomal subunit protein eS6|Methanoregula boonei (strain DSM

Query: 1 VEFKVVETDP 10
VE KVV +DP
Sbjct: 2 VELKVVVSDP 11


>sp|RS6E_ARCFU|SMALL ribosomal subunit protein eS6|Archaeoglobus fulgidus (strain ATCC

Query: 1 VEFKVVETDP 10
+EF+VV +DP
Sbjct: 1 MEFRVVISDP 10


>sp|RS6E_HALLT|SMALL ribosomal subunit protein eS6|Halorubrum lacusprofundi (strain

Query: 1 VEFKVVETDP 10
EFKVV DP
Sbjct: 2 AEFKVVIADP 11


>sp|RS6E_METAC|SMALL ribosomal subunit protein eS6|Methanosarcina acetivorans (strain

Query: 3 FKVVETDP 10
FKVV +DP
Sbjct: 4 FKVVVSDP 11


>sp|RS6E_HYPBU|SMALL ribosomal subunit protein eS6|Hyperthermus butylicus (strain DSM

Query: 2 EFKVVETDP 10
EFK+V +DP
Sbjct: 3 EFKIVISDP 11


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 2 EFKVVETDP 10
E+KV+E +P
Sbjct: 291 EYKVIEVNP 299


>sp|RS6E_METKA|SMALL ribosomal subunit protein eS6|Methanopyrus kandleri (strain AV19

Query: 2 EFKVVETDP 10
EFKVV DP
Sbjct: 3 EFKVVVADP 11


>sp|RS6E_METBF|SMALL ribosomal subunit protein eS6|Methanosarcina barkeri (strain

Query: 3 FKVVETDP 10
FKVV +DP
Sbjct: 4 FKVVVSDP 11


>sp|RS6E_METMA|SMALL ribosomal subunit protein eS6|Methanosarcina mazei (strain ATCC

Query: 3 FKVVETDP 10
FKVV +DP
Sbjct: 4 FKVVVSDP 11


>sp|DHAS_METTH|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 EFKVVETDP 10
+ +VVETDP
Sbjct: 61 DMEVVETDP 69


>sp|RS6E_METPE|SMALL ribosomal subunit protein eS6|Methanosphaerula palustris (strain

Query: 1 VEFKVVETD 9
VEFK++ +D
Sbjct: 2 VEFKIILSD 10


>sp|RS19_METAR|SMALL ribosomal subunit protein uS19|Methanocella arvoryzae (strain DSM

Query: 2 EFKVVETDP 10
E+K VET P
Sbjct: 96 EWKAVETTP 104


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 2 EFKVVETDP 10
E+ V+ET+P
Sbjct: 291 EYYVIETNP 299


>sp|RS6E_METBU|SMALL ribosomal subunit protein eS6|Methanococcoides burtonii (strain

Query: 1 VEFKVVETDP 10
+FK+V +DP
Sbjct: 2 ADFKIVVSDP 11


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 2 EFKVVETDP 10
E+ V+ET+P
Sbjct: 294 EYYVIETNP 302


>sp|RNABP_PYRAB|RNA-BINDING protein PAB1135|Pyrococcus abyssi (strain GE5 /

Query: 1 VEFKVVETD 9
VEF+V+ET+
Sbjct: 42 VEFEVIETE 50


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 2 EFKVVETDP 10
E+KV+E +P
Sbjct: 292 EYKVIEVNP 300


>sp|Y761_ARCFU|UNCHARACTERIZED protein AF_0761|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VEFKVVETD 9
VEFK VE D
Sbjct: 90 VEFKNVEVD 98


>sp|RS6E_METMJ|SMALL ribosomal subunit protein eS6|Methanoculleus marisnigri (strain

Query: 2 EFKVVETDP 10
+FK++ +DP
Sbjct: 3 DFKIILSDP 11


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VEFKVVETDP 10
EF +V TDP
Sbjct: 623 AEFVIVGTDP 632


>sp|RS6E_SULAC|SMALL ribosomal subunit protein eS6|Sulfolobus acidocaldarius (strain

Query: 2 EFKVVETDP 10
+FK+V +DP
Sbjct: 3 DFKIVVSDP 11


>sp|NADK_SULTO|NAD kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 FKVVETDP 10
FK+ E DP
Sbjct: 29 FKITENDP 36


>sp|SYS_PYRCJ|SERINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VEFKVVETDP 10
VE+ VVE +P
Sbjct: 144 VEYVVVEKEP 153


>sp|KPYK_THEAC|PYRUVATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VEFKVVETDP 10
V F+V TDP
Sbjct: 115 VSFEVESTDP 124


>sp|RS6E_METS5|SMALL ribosomal subunit protein eS6|Metallosphaera sedula (strain ATCC

Query: 1 VEFKVVETDP 10
+FK+V +DP
Sbjct: 2 ADFKIVISDP 11


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 2 EFKVVETDP 10
E+ ++ET+P
Sbjct: 291 EYYIIETNP 299


>sp|RS6E_STAMF|SMALL ribosomal subunit protein eS6|Staphylothermus marinus (strain

Query: 1 VEFKVVETDP 10
+FK+V +DP
Sbjct: 2 ADFKIVISDP 11


>sp|RS6E_SACS2|SMALL ribosomal subunit protein eS6|Saccharolobus solfataricus (strain

Query: 2 EFKVVETDP 10
+FK+V +DP
Sbjct: 3 DFKIVISDP 11


>sp|RS6E_METAR|SMALL ribosomal subunit protein eS6|Methanocella arvoryzae (strain DSM

Query: 2 EFKVVETDP 10
+FK+V +DP
Sbjct: 3 DFKLVVSDP 11


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 2 EFKVVETDP 10
E+ ++ET+P
Sbjct: 291 EYYIIETNP 299




34|Sequence|166|175|VETDPSPYCI

>sp|TRPE_ARCFU|ANTHRANILATE synthase component 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ETDPSPY 8
ET+PSPY
Sbjct: 198 ETNPSPY 204


>sp|COFH_HALMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Haloarcula marismortui (strain ATCC

Query: 2 ETDPSPYC 9
ETDP+ YC
Sbjct: 182 ETDPATYC 189


>sp|TRPE_THEKO|ANTHRANILATE synthase component 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VETDPSPY 8
VE +PSPY
Sbjct: 213 VELNPSPY 220


>sp|PSB2_HALTV|PROTEASOME subunit beta 2|Haloterrigena turkmenica (strain ATCC 51198

Query: 3 TDPSPY 8
+DPSPY
Sbjct: 13 SDPSPY 18


>sp|PYRI_SULAC|ASPARTATE carbamoyltransferase regulatory chain|Sulfolobus acidocaldarius

Query: 5 PSPYCI 10
P+PYCI
Sbjct: 114 PNPYCI 119


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 5 PSPYC 9
PSPYC
Sbjct: 432 PSPYC 436


>sp|IF2P_CALMQ|PROBABLE translation initiation factor IF-2|Caldivirga maquilingensis

Query: 1 VETDPSPY 8
V+ DP PY
Sbjct: 330 VQGDPKPY 337


>sp|TRPE_METJA|ANTHRANILATE synthase component 1|Methanocaldococcus jannaschii (strain ATCC

Query: 2 ETDPSPY 8
E +PSPY
Sbjct: 249 EINPSPY 255


>sp|GATE_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanobrevibacter smithii (strain ATCC

Query: 1 VETDPSP 7
VE DP+P
Sbjct: 484 VEVDPTP 490


>sp|AROC_THEGJ|CHORISMATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 5 PSPYC 9
P+PYC
Sbjct: 172 PNPYC 176


>sp|SYY_METHJ|TYROSINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 PSPYCI 10
PSP CI
Sbjct: 191 PSPVCI 196


>sp|TRPE_HALVD|ANTHRANILATE synthase component 1|Haloferax volcanii (strain ATCC 29605

Query: 2 ETDPSPY 8
E +PSPY
Sbjct: 292 EVNPSPY 298


>sp|DHAS_METTH|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 VETDPS 6
VETDPS
Sbjct: 65 VETDPS 70


>sp|APGM_METTP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanothrix thermoacetophila (strain DSM

Query: 3 TDPSPYCI 10
TDP P+ I
Sbjct: 347 TDPVPFAI 354


>sp|LEUC1_METKA|3-ISOPROPYLMALATE dehydratase large subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 3 TDPSPY 8
TDP PY
Sbjct: 412 TDPRPY 417




35|Sequence|171|180|SPYCIVAPDT

>sp|RL30_ARCFU|LARGE ribosomal subunit protein uL30|Archaeoglobus fulgidus (strain

Query: 3 YCIVAPDT 10
+C+V PDT
Sbjct: 31 HCVVIPDT 38


>sp|FWDD_METJA|PROTEIN FwdD|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CIVAPDT 10
C+V PDT
Sbjct: 86 CVVKPDT 92


>sp|HTPX_HALSA|PROTEASE HtpX homolog|Halobacterium salinarum (strain ATCC 700922

Query: 1 SPYCIVAPDT 10
S CI +PDT
Sbjct: 258 SALCISSPDT 267


>sp|RL30_METMP|LARGE ribosomal subunit protein uL30|Methanococcus maripaludis (strain

Query: 3 YCIVAPDT 10
+C++ PDT
Sbjct: 32 HCVIIPDT 39


>sp|PYRI_SULAC|ASPARTATE carbamoyltransferase regulatory chain|Sulfolobus acidocaldarius

Query: 1 SPYCIVAPD 9
+PYCI + D
Sbjct: 115 NPYCITSND 123


>sp|RL30_METMJ|LARGE ribosomal subunit protein uL30|Methanoculleus marisnigri (strain

Query: 3 YCIVAPDT 10
+C++ PDT
Sbjct: 31 HCVLVPDT 38


>sp|Y1652_METMP|UNCHARACTERIZED solute-binding protein MMP1652|Methanococcus maripaludis (strain

Query: 3 YCIVAPDT 10
YCIV+P++
Sbjct: 187 YCIVSPES 194


>sp|SURE_METS3|5'-NUCLEOTIDASE SurE|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 CIVAPDT 10
C+VAP+T
Sbjct: 30 CVVAPET 36


>sp|Y1223_PYRHO|UNCHARACTERIZED ZPR1-like protein PH1223|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PYCIVAPD 9
PY ++ PD
Sbjct: 211 PYIVIEPD 218


>sp|RL30_METHJ|LARGE ribosomal subunit protein uL30|Methanospirillum hungatei JF-1

Query: 3 YCIVAPDT 10
+C++ PDT
Sbjct: 31 HCVLIPDT 38


>sp|RS6E_METS5|SMALL ribosomal subunit protein eS6|Metallosphaera sedula (strain ATCC

Query: 2 PYCIVAPDT 10
P C+V P T
Sbjct: 42 PVCLVNPKT 50


>sp|AHBD_METBF|ADOMET-DEPENDENT heme synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PYCIVAP 8
PYCI P
Sbjct: 340 PYCIYRP 346


>sp|Y1254_METJA|UNCHARACTERIZED protein MJ1254|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CIVAPD 9
CIV PD
Sbjct: 69 CIVTPD 74


>sp|ACDB2_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 4 CIVAPD 9
C+V+PD
Sbjct: 201 CVVSPD 206


>sp|ACDB2_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 4 CIVAPD 9
C+V+PD
Sbjct: 201 CVVSPD 206


>sp|ACDB1_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 4 CIVAPD 9
C+V+PD
Sbjct: 201 CVVSPD 206


>sp|ACDB1_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 4 CIVAPD 9
C+V+PD
Sbjct: 201 CVVSPD 206


>sp|ACDB_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit beta|Archaeoglobus fulgidus

Query: 4 CIVAPD 9
CIV+PD
Sbjct: 224 CIVSPD 229


>sp|ACDB1_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 4 CIVAPD 9
C+V+PD
Sbjct: 201 CVVSPD 206


>sp|ACDB2_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 4 CIVAPD 9
C+V+PD
Sbjct: 202 CVVSPD 207


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 SPYCIVAPDT 10
+PYC++ T
Sbjct: 170 NPYCVICNAT 179


>sp|RL30_METLZ|LARGE ribosomal subunit protein uL30|Methanocorpusculum labreanum

Query: 3 YCIVAPDT 10
+C++ P+T
Sbjct: 31 HCVIVPET 38


>sp|DPCKG_CENSY|GTP-DEPENDENT dephospho-CoA kinase|Cenarchaeum symbiosum (strain A)

Query: 2 PYCIVAPD 9
P CI APD
Sbjct: 110 PACIYAPD 117


>sp|RL30_METM7|LARGE ribosomal subunit protein uL30|Methanococcus maripaludis (strain

Query: 3 YCIVAPD 9
+C+V PD
Sbjct: 32 HCVVIPD 38


>sp|RL30_METM5|LARGE ribosomal subunit protein uL30|Methanococcus maripaludis (strain

Query: 3 YCIVAPD 9
+C+V PD
Sbjct: 32 HCVVIPD 38


>sp|ACDB_METTH|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanothermobacter

Query: 4 CIVAPD 9
CIV PD
Sbjct: 200 CIVTPD 205


>sp|RL30_METJA|LARGE ribosomal subunit protein uL30|Methanocaldococcus jannaschii

Query: 3 YCIVAPDT 10
+C++ P+T
Sbjct: 32 HCVIIPET 39




36|Sequence|176|185|VAPDTVIHCE

>sp|TRPB1_METTH|TRYPTOPHAN synthase beta chain 1|Methanothermobacter thermautotrophicus

Query: 3 PDTVIHC 9
PDTVI C
Sbjct: 222 PDTVIAC 228


>sp|TRPB2_METTM|TRYPTOPHAN synthase beta chain 2|Methanothermobacter marburgensis (strain ATCC

Query: 3 PDTVIHC 9
PDT+I C
Sbjct: 220 PDTIIAC 226


>sp|TRPB1_METMA|TRYPTOPHAN synthase beta chain 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PDTVIHC 9
PDT+I C
Sbjct: 230 PDTIIAC 236


>sp|NUCS_SACS2|ENDONUCLEASE NucS|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VAPDTVIH 8
VAPD IH
Sbjct: 207 VAPDLTIH 214


>sp|Y421_METJA|UNCHARACTERIZED protein MJ0421|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PDTVIHCE 10
PD V+H E
Sbjct: 129 PDKVVHVE 136


>sp|SYE_METKA|GLUTAMATE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 VAPDTVIHCE 10
V PD + CE
Sbjct: 511 VPPDQAVRCE 520


>sp|FLAJ_METJA|FLAGELLA accessory protein J|Methanocaldococcus jannaschii (strain ATCC

Query: 3 PDTVIH 8
P+TVIH
Sbjct: 481 PETVIH 486


>sp|CAPPA_PYRCJ|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 APDTVIH 8
APD V+H
Sbjct: 288 APDEVLH 294


>sp|UVRB_NATPD|UVRABC system protein B|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VAPDTVIHCE 10
VAPDTV E
Sbjct: 621 VAPDTVDEAE 630


>sp|NTPPA_METBU|DTTP/UTP pyrophosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VAPDTVIHCE 10
++ DTV+ C+
Sbjct: 67 ISADTVVFCD 76


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VAPDTVIHCE 10
V PDTV+ E
Sbjct: 1984 VIPDTVVQQE 1993




37|Sequence|181|190|VIHCEGEPIK

>sp|TRPB_DESA1|TRYPTOPHAN synthase beta chain|Desulfurococcus amylolyticus (strain DSM

Query: 1 VIHCEGEPIK 10
+IH GEP+K
Sbjct: 30 MIHPSGEPVK 39


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VIHCEGEPI 9
+IH GEPI
Sbjct: 397 IIHSVGEPI 405


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VIHCEGEPI 9
+IH GEPI
Sbjct: 397 IIHSVGEPI 405


>sp|IF2P_METBU|PROBABLE translation initiation factor IF-2|Methanococcoides burtonii

Query: 1 VIHCEGEPIK 10
V+ C GEPI+
Sbjct: 267 VVGCLGEPIQ 276


>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 IHCEGEPI 9
+HC G P+
Sbjct: 128 LHCHGHPL 135


>sp|TOP6A_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VIHCEGEP 8
V+ C+G+P
Sbjct: 249 VVFCDGDP 256


Query: 1 VIHCEGEPIK 10
++H +G+P +
Sbjct: 222 IVHLKGQPAR 231


>sp|PURO_METS3|IMP cyclohydrolase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 IHCEGEP 8
++CEG+P
Sbjct: 11 MNCEGKP 17


>sp|Y748_ARCFU|UNCHARACTERIZED protein AF_0748|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VIHCEGEPI 9
V+ C+G P+
Sbjct: 267 VVSCDGNPL 275


>sp|DTDA_METMA|D-AMINOACYL-TRNA deacylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IHCEGEP 8
+HC G P
Sbjct: 106 VHCTGNP 112


>sp|DTDA_METBF|D-AMINOACYL-TRNA deacylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 IHCEGEP 8
+HC G P
Sbjct: 117 VHCTGNP 123


>sp|ARCH_ARCFU|PROTEIN archease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IHCEGEPIK 10
+ CEGE ++
Sbjct: 50 VECEGEDVE 58


>sp|FLAH_METVO|ARCHAEAL flagellar ATP-binding protein FlaH|Methanococcus voltae

Query: 1 VIHCEGE 7
+IH EGE
Sbjct: 26 IIHIEGE 32


>sp|TIAS_METKA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanopyrus kandleri (strain

Query: 1 VIHCEGEP 8
++ CEGEP
Sbjct: 93 LVVCEGEP 100


>sp|KHK_HALVD|KETOHEXOKINASE volcanii (strain ATCC 29605

Query: 1 VIHCEGEPIK 10
V+ C G+P++
Sbjct: 106 VVGCLGDPVE 115


>sp|RL4_THEKO|LARGE ribosomal subunit protein uL4|Thermococcus kodakarensis (strain

Query: 1 VIHCEGEPIK 10
V + EGEP++
Sbjct: 5 VFNLEGEPVE 14


>sp|PUS10_METKA|TRNA pseudouridine synthase Pus10|Methanopyrus kandleri (strain AV19 /

Query: 1 VIHCEGEPIK 10
+ EGEPIK
Sbjct: 129 TLGVEGEPIK 138


>sp|RL4_THEON|LARGE ribosomal subunit protein uL4|Thermococcus onnurineus (strain

Query: 1 VIHCEGEPIK 10
V + EGEP++
Sbjct: 5 VFNLEGEPVE 14


>sp|RL4_THEGJ|LARGE ribosomal subunit protein uL4|Thermococcus gammatolerans (strain

Query: 1 VIHCEGEPIK 10
V + EGEP++
Sbjct: 5 VFNLEGEPVE 14


>sp|TOP6A_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VIHCEGEPIK 10
++H +G+P +
Sbjct: 214 IVHLKGQPAR 223


>sp|Y2029_AERPE|UPF0284 protein APE_2029.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 VIHCEGEPI 9
++ C G+P+
Sbjct: 219 IVDCVGDPV 227


>sp|IF2P_METKA|PROBABLE translation initiation factor IF-2|Methanopyrus kandleri (strain

Query: 2 IHCEGEPIK 10
I GEPIK
Sbjct: 519 IQMHGEPIK 527


>sp|MCRD_METJA|METHYL-COENZYME M reductase I operon|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VIHCEGEPIK 10
+IH +G P++
Sbjct: 63 IIHVKGVPVE 72




38|Sequence|186|195|GEPIKREDEE

>sp|POK_THEKO|PANTOATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GEPIKREDEE 10
GEP+KRE+ E
Sbjct: 60 GEPVKREEAE 69


>sp|TRPG_METTM|ANTHRANILATE synthase component 2|Methanothermobacter marburgensis (strain

Query: 1 GEPIKRED 8
G PIKRED
Sbjct: 62 GNPIKRED 69


>sp|ASSY_METST|ARGININOSUCCINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GEPIKREDEE 10
GEP+K DEE
Sbjct: 220 GEPVKINDEE 229


>sp|PUS10_METKA|TRNA pseudouridine synthase Pus10|Methanopyrus kandleri (strain AV19 /

Query: 1 GEPIKRE 7
GEPIKRE
Sbjct: 134 GEPIKRE 140


>sp|TRPB_DESA1|TRYPTOPHAN synthase beta chain|Desulfurococcus amylolyticus (strain DSM

Query: 1 GEPIKREDEE 10
GEP+KR + E
Sbjct: 35 GEPVKRSELE 44


>sp|TRM56_METBF|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosarcina barkeri

Query: 1 GEPIKRE 7
GEP+KRE
Sbjct: 148 GEPLKRE 154


>sp|AROC_SULTO|CHORISMATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GEPIKREDEE 10
G PIK+ED E
Sbjct: 33 GLPIKKEDIE 42


>sp|GMS_METOI|GMGT synthase|Methanothermococcus okinawensis (strain DSM 14208

Query: 1 GEPIKRED 8
GEP+ R+D
Sbjct: 167 GEPLMRKD 174


>sp|COAD_PYRAB|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 GEPIKRE 7
G PIKRE
Sbjct: 151 GNPIKRE 157


>sp|PELO_PYRHO|PROTEIN pelota homolog|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 IKREDEE 10
IKREDEE
Sbjct: 173 IKREDEE 179


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GEPIKREDE 9
G P++RED+
Sbjct: 876 GNPLEREDQ 884


>sp|QUEE_METHJ|7-CARBOXY-7-DEAZAGUANINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GEPIKREDE 9
GEP+ ++DE
Sbjct: 102 GEPLLQKDE 110


>sp|COAD_PYRFU|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GEPIKREDE 9
G PI+RE++
Sbjct: 152 GNPIRREEK 160


>sp|PELO_PYRAB|PROTEIN pelota homolog|Pyrococcus abyssi (strain GE5 /

Query: 4 IKREDEE 10
+KREDEE
Sbjct: 173 VKREDEE 179


>sp|Y578_METJA|UNCHARACTERIZED protein MJ0578|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EPIKRE 7
EPIKRE
Sbjct: 117 EPIKRE 122


>sp|Y746_HALSA|UPF0229 protein VNG_0746C|Halobacterium salinarum (strain ATCC 700922

Query: 3 PIKREDE 9
P++REDE
Sbjct: 244 PLRREDE 250


>sp|MOAA_THEKO|PROBABLE GTP 3',8-cyclase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GEPIKRED 8
GEP RED
Sbjct: 66 GEPTVRED 73


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 1 GEPIKREDE 9
GEP+ ED+
Sbjct: 850 GEPLTHEDQ 858


>sp|MOAA_METAC|PROBABLE GTP 3',8-cyclase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GEPIKREDEE 10
GEP+ R+D E
Sbjct: 89 GEPLFRKDFE 98




39|Sequence|191|200|REDEEESLNE

>sp|ARNS_SULAC|SERINE/THREONINE-PROTEIN kinase ArnS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 REDEEE 6
REDEEE
Sbjct: 260 REDEEE 265


>sp|NPPNK_METJA|BIFUNCTIONAL NADP phosphatase/NAD kinase|Methanocaldococcus jannaschii (strain

Query: 1 REDEEESLN 9
RED+EE++N
Sbjct: 309 REDKEEAIN 317


>sp|RL2_METBU|LARGE ribosomal subunit protein uL2|Methanococcoides burtonii (strain

Query: 1 REDEEESLN 9
R DEE +LN
Sbjct: 32 RVDEESTLN 40


>sp|SEPS_METHJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 EDEEESLNE 10
EDEEESL +
Sbjct: 125 EDEEESLRK 133




40|Sequence|196|205|ESLNEVGYDD

>sp|Y1311_METJA|UNCHARACTERIZED protein MJ1311|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ESLNEVGYD 9
E L E+GYD
Sbjct: 246 EKLKEIGYD 254


>sp|FUMC_SACS2|FUMARATE hydratase class II|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ESLNEVGYDD 10
E+L E+GY D
Sbjct: 409 EALRELGYSD 418


>sp|MCH_ARCFU|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LNEVGYD 9
+NE+GYD
Sbjct: 192 MNEIGYD 198


>sp|TRM1_METLZ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocorpusculum labreanum

Query: 2 SLNEVGY 8
SLNE GY
Sbjct: 338 SLNEAGY 344


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 2 SLNEVGYDD 10
SLNEVG D
Sbjct: 405 SLNEVGVPD 413


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 2 SLNEVGYDD 10
SLNEVG D
Sbjct: 405 SLNEVGVPD 413


>sp|RADA_PYRFU|DNA repair and recombination protein|Pyrococcus furiosus (strain ATCC

Query: 1 ESLNEVGYD 9
E L E GYD
Sbjct: 49 EKLREAGYD 57


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 1 ESLNEVGYD 9
E L E+GYD
Sbjct: 776 EKLRELGYD 784


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis

Query: 1 ESLNEVGYD 9
E L E GYD
Sbjct: 54 EKLREAGYD 62


>sp|UBIX_SACS2|FLAVIN prenyltransferase UbiX|Saccharolobus solfataricus (strain ATCC

Query: 3 LNEVGYD 9
LNE+GY+
Sbjct: 37 LNELGYE 43


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 ESLNEVGYD 9
E L E+GYD
Sbjct: 649 EDLKELGYD 657


>sp|RL15_SACS2|LARGE ribosomal subunit protein uL15|Saccharolobus solfataricus (strain

Query: 3 LNEVGYD 9
LNE+GY+
Sbjct: 98 LNELGYN 104


>sp|ENGB_METKA|PROBABLE GTP-binding protein EngB|Methanopyrus kandleri (strain AV19 /

Query: 3 LNEVGYD 9
LNEVG D
Sbjct: 120 LNEVGLD 126


>sp|DCD_PYRAB|DCTP deaminase|Pyrococcus abyssi (strain GE5 /

Query: 1 ESLNEVGYD 9
ESL GYD
Sbjct: 20 ESLQPAGYD 28


>sp|DCD_THEGJ|DCTP deaminase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 ESLNEVGYD 9
ESL GYD
Sbjct: 20 ESLQPAGYD 28


>sp|RADA_METJA|DNA repair and recombination protein|Methanocaldococcus jannaschii

Query: 1 ESLNEVGYDD 10
E L E GY D
Sbjct: 48 EKLKEAGYTD 57


>sp|DCD_PYRFU|DCTP deaminase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ESLNEVGYD 9
ESL GYD
Sbjct: 20 ESLQPAGYD 28


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 2 SLNEVGYDD 10
SL E+GY D
Sbjct: 866 SLKEMGYTD 874


>sp|DCD_PYRHO|DCTP deaminase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ESLNEVGYD 9
ESL GYD
Sbjct: 20 ESLQPAGYD 28


>sp|DCD_THEKO|DCTP deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ESLNEVGYD 9
ESL GYD
Sbjct: 20 ESLQPAGYD 28


>sp|SRP19_HALWD|SIGNAL recognition particle 19 kDa|Haloquadratum walsbyi (strain DSM

Query: 1 ESLNEVGYD 9
E++ ++GYD
Sbjct: 40 EAVQQIGYD 48


>sp|GLYA_METTM|SERINE hydroxymethyltransferase|Methanothermobacter marburgensis (strain

Query: 1 ESLNEVGYD 9
E+LNE+G++
Sbjct: 294 ENLNELGFN 302


>sp|MCH_METPE|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 LNEVGYD 9
LNE+G+D
Sbjct: 192 LNELGFD 198


>sp|MCH_METLZ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 LNEVGYD 9
LNE+G+D
Sbjct: 192 LNELGFD 198


>sp|IF2P_METVS|PROBABLE translation initiation factor IF-2|Methanococcus vannielii (strain

Query: 3 LNEVGYD 9
LNE+G+D
Sbjct: 174 LNELGFD 180


>sp|IF2P_METMP|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 3 LNEVGYD 9
LNE+G+D
Sbjct: 174 LNELGFD 180


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 3 LNEVGYD 9
LNEVG D
Sbjct: 8863 LNEVGVD 8869


>sp|MCH_METS3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 ESLNEVGYDD 10
E+ E+GY+D
Sbjct: 123 ETYEEIGYED 132


>sp|MCH_METMJ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 LNEVGYD 9
LNE+G+D
Sbjct: 192 LNELGFD 198


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 3 LNEVGYD 9
LNE+G+D
Sbjct: 732 LNELGFD 738


>sp|MCH_METHJ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 LNEVGYD 9
LNE+G+D
Sbjct: 192 LNELGFD 198


>sp|RPO2C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 1 ESLNEVGYDD 10
++ ++GYDD
Sbjct: 193 QTTEQIGYDD 202


>sp|RPO2C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 1 ESLNEVGYDD 10
++ ++GYDD
Sbjct: 193 QTTEQIGYDD 202


>sp|MCH_METB6|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanoregula boonei (strain DSM 21154

Query: 3 LNEVGYD 9
LNE+G+D
Sbjct: 192 LNELGFD 198


>sp|CREN1_PYRCJ|CRENACTIN calidifontis (strain DSM 21063

Query: 1 ESLNEVGYDD 10
E L ++GY D
Sbjct: 217 EILKDIGYSD 226


>sp|IF2P_METM6|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 3 LNEVGYD 9
LNE+G+D
Sbjct: 174 LNELGFD 180


>sp|SYH_METTH|HISTIDINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 ESLNEVGYD 9
ESL+E+G D
Sbjct: 145 ESLHELGLD 153


>sp|IF2P_METM7|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 3 LNEVGYD 9
LNE+G+D
Sbjct: 174 LNELGFD 180


>sp|IF2P_METM5|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 3 LNEVGYD 9
LNE+G+D
Sbjct: 174 LNELGFD 180




41|Sequence|201|210|VGYDDIGGCR

>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 VGYDDIGG 8
VGY+DIGG
Sbjct: 145 VGYEDIGG 152


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 VGYDDIGG 8
V YDDIGG
Sbjct: 176 VSYDDIGG 183


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 1 VGYDDIGG 8
V YDDIGG
Sbjct: 149 VTYDDIGG 156


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 YDDIGGCR 10
YD++G CR
Sbjct: 543 YDNVGWCR 550


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VGYDDIGG 8
V Y+DIGG
Sbjct: 138 VSYEDIGG 145


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 1 VGYDDIGG 8
V Y+DIGG
Sbjct: 136 VSYNDIGG 143


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 1 VGYDDIGGC 9
+G+ D+ GC
Sbjct: 806 IGFSDVNGC 814


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VGYDDIGGCR 10
V Y+DIGG +
Sbjct: 179 VTYEDIGGLK 188


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 VGYDDIGGCR 10
V Y+DIGG +
Sbjct: 176 VTYEDIGGLK 185


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VGYDDIGGCR 10
V Y+DIGG +
Sbjct: 137 VTYNDIGGLK 146


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VGYDDIGGCR 10
V Y+DIGG +
Sbjct: 134 VTYNDIGGLK 143


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 VGYDDIGGCR 10
V Y+DIGG +
Sbjct: 134 VTYNDIGGLK 143


>sp|Y150_ARCFU|UNCHARACTERIZED protein AF_0150|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DDIGGC 9
DD+GGC
Sbjct: 65 DDVGGC 70


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VGYDDIGG 8
+ Y+DIGG
Sbjct: 187 ISYEDIGG 194


Query: 1 VGYDDIGG 8
V +DDIGG
Sbjct: 464 VHWDDIGG 471


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 1 VGYDDIGG 8
V Y+DIGG
Sbjct: 147 VTYEDIGG 154


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VGYDDIGG 8
V Y+DIGG
Sbjct: 135 VTYNDIGG 142


>sp|Y515_METJA|UNCHARACTERIZED protein MJ0515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGYDDIGGCR 10
+GY+ IGG R
Sbjct: 150 MGYNVIGGVR 159


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 VGYDDI 6
VGYDDI
Sbjct: 757 VGYDDI 762


>sp|Y1383_THEVO|MEMO1 family protein TV1383|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VGYDDIGGCR 10
VGY I CR
Sbjct: 258 VGYSSIVACR 267


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGYDDIGG 8
V Y+DIGG
Sbjct: 167 VRYEDIGG 174


>sp|OGG1_METJA|8-OXOGUANINE DNA glycosylase/AP lyase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VGYDDIG 7
VGYDD+
Sbjct: 138 VGYDDVA 144


>sp|KHSE_SACS2|HOMOSERINE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VGYDDIGGC 9
+ YD IG C
Sbjct: 250 IKYDAIGAC 258


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 VGYDDIGG 8
+ Y+DIGG
Sbjct: 186 ITYEDIGG 193


Query: 1 VGYDDIGG 8
+ +DD+GG
Sbjct: 459 ITWDDVGG 466


>sp|AATB_HALMA|A-TYPE ATP synthase subunit B|Haloarcula marismortui (strain ATCC 43049

Query: 1 VGYDDI 6
VGYDDI
Sbjct: 23 VGYDDI 28


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VGYDDIGG 8
V YD IGG
Sbjct: 156 VDYDQIGG 163


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VGYDDIGG 8
V YD IGG
Sbjct: 156 VDYDQIGG 163


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VGYDDIGG 8
V Y DIGG
Sbjct: 135 VTYQDIGG 142


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 YDDIGG 8
Y+DIGG
Sbjct: 152 YEDIGG 157


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VGYDDIGG 8
V Y DIGG
Sbjct: 131 VHYSDIGG 138


>sp|KHSE_SULTO|HOMOSERINE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 YDDIGGC 9
YD IG C
Sbjct: 247 YDAIGAC 253


>sp|FEN_HALMA|FLAP endonuclease 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 VGYDDIGG 8
V +DD+GG
Sbjct: 15 VSFDDLGG 22


>sp|DTDA_METB6|D-AMINOACYL-TRNA deacylase|Methanoregula boonei (strain DSM 21154

Query: 4 DDIGGC 9
DD+ GC
Sbjct: 10 DDVAGC 15


>sp|Y1540_METJA|UNCHARACTERIZED protein MJ1540|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGYDDIGG 8
VGYD GG
Sbjct: 106 VGYDARGG 113


>sp|KHSE_SACI7|HOMOSERINE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VGYDDIGGC 9
+ YD +G C
Sbjct: 250 IKYDAVGSC 258


>sp|KHSE_SACI6|HOMOSERINE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VGYDDIGGC 9
+ YD +G C
Sbjct: 250 IKYDAVGSC 258


>sp|KHSE_SACI4|HOMOSERINE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VGYDDIGGC 9
+ YD +G C
Sbjct: 250 IKYDAVGSC 258


>sp|KHSE_SACI3|HOMOSERINE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 VGYDDIGGC 9
+ YD +G C
Sbjct: 250 IKYDAVGSC 258


>sp|KHSE_SACI2|HOMOSERINE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VGYDDIGGC 9
+ YD +G C
Sbjct: 250 IKYDAVGSC 258


>sp|KHSE_SACI1|HOMOSERINE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VGYDDIGGC 9
+ YD +G C
Sbjct: 250 IKYDAVGSC 258


>sp|PSB_HALMD|PROTEASOME subunit beta|Halomicrobium mukohataei (strain ATCC 700874

Query: 2 GYDDIGGCR 10
GYDD G R
Sbjct: 229 GYDDFEGAR 237


>sp|COFG_METTP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GYDDIGG 8
G DD+GG
Sbjct: 258 GADDLGG 264


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 GYDDIGG 8
G DD+GG
Sbjct: 283 GIDDLGG 289


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VGYDDIGG 8
+ ++DIGG
Sbjct: 145 ISFEDIGG 152


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 VGYDDIGG 8
+ ++DIGG
Sbjct: 145 ISFEDIGG 152


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 VGYDDIGG 8
+ ++DIGG
Sbjct: 145 ISFEDIGG 152


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 1 VGYDDIGG 8
+ ++DIGG
Sbjct: 145 ISFEDIGG 152


>sp|PYRG_METPE|CTP synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 GYDDIGG 8
G DD+GG
Sbjct: 415 GVDDLGG 421


>sp|GUAAA_HALMA|GMP synthase [glutamine-hydrolyzing] subunit A|Haloarcula marismortui

Query: 4 DDIGGC 9
DDIG C
Sbjct: 54 DDIGNC 59


>sp|COFH_METMJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanoculleus marisnigri (strain ATCC

Query: 2 GYDDIGG 8
G DD+GG
Sbjct: 314 GADDLGG 320


>sp|COFG_HALSA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GYDDIGG 8
G DD+GG
Sbjct: 286 GVDDLGG 292


>sp|COFG_HALS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 GYDDIGG 8
G DD+GG
Sbjct: 286 GVDDLGG 292


>sp|ASSY_HALSA|ARGININOSUCCINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GYDDIGG 8
GYDD+ G
Sbjct: 28 GYDDVIG 34




42|Sequence|206|215|IGGCRKQLAQ

>sp|DTDA_METBF|D-AMINOACYL-TRNA deacylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IGGCRKQLA 9
+GGC K LA
Sbjct: 129 LGGCPKSLA 137


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 IGGCRKQLAQ 10
IGG +QLA+
Sbjct: 140 IGGLERQLAE 149


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IGGCRKQLAQ 10
IGG +KQL +
Sbjct: 142 IGGLKKQLQE 151


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IGGCRKQLAQ 10
IGG +KQL +
Sbjct: 139 IGGLKKQLQE 148


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 IGGCRKQLAQ 10
IGG +KQL +
Sbjct: 139 IGGLKKQLQE 148


>sp|SYW1_HALSA|TRYPTOPHAN--TRNA ligase 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 GGCRKQLA 9
GGC++Q A
Sbjct: 473 GGCKEQAA 480


>sp|TRPB2_METAC|TRYPTOPHAN synthase beta chain 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 CRKQLAQ 10
C++QLAQ
Sbjct: 255 CKQQLAQ 261


>sp|RAD25_HALSA|PUTATIVE DNA 3'-5' helicase Rad25|Halobacterium salinarum (strain ATCC

Query: 1 IGGCRKQLAQ 10
+GG R+Q AQ
Sbjct: 540 LGGSRRQGAQ 549


>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 1 IGGCRKQLAQ 10
+GG R+Q AQ
Sbjct: 555 LGGSRRQGAQ 564


>sp|GLYA_METTP|SERINE hydroxymethyltransferase|Methanothrix thermoacetophila (strain DSM

Query: 4 CRKQLAQ 10
CR++LAQ
Sbjct: 238 CREELAQ 244


>sp|Y575_METJA|UNCHARACTERIZED protein MJ0575|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GGCRKQLA 9
G CRKQ A
Sbjct: 207 GDCRKQKA 214


>sp|METXA_METZD|HOMOSERINE O-acetyltransferase|Methanosalsum zhilinae (strain DSM 4017

Query: 1 IGGCR 5
IGGCR
Sbjct: 97 IGGCR 101


>sp|Y735_METS5|UPF0284 protein Msed_0735|Metallosphaera sedula (strain ATCC 51363

Query: 2 GGCRKQLAQ 10
GG RK++A+
Sbjct: 121 GGVRKEVAE 129


>sp|ILVD_HALMA|DIHYDROXY-ACID dehydratase|Haloarcula marismortui (strain ATCC 43049

Query: 1 IGGCRKQL 8
IGGC K +
Sbjct: 131 IGGCDKNM 138


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IGGCRKQLAQ 10
IGG KQL +
Sbjct: 140 IGGLEKQLQE 149




43|Sequence|211|220|KQLAQIKEMV

>sp|RS3_SACS2|SMALL ribosomal subunit protein uS3|Saccharolobus solfataricus (strain

Query: 1 KQLAQIKEMV 10
KQLAQI E V
Sbjct: 64 KQLAQIFEKV 73


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KQLAQIK 7
KQLAQ+K
Sbjct: 780 KQLAQVK 786




44|Sequence|216|225|IKEMVELPLR

>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IKEMVELPLR 10
I+EM+ELPL+
Sbjct: 202 IREMIELPLK 211


Query: 1 IKEMVELPL 9
IKE VELPL
Sbjct: 479 IKETVELPL 487


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 IKEMVELPLR 10
++EM+ELP+R
Sbjct: 191 VREMIELPMR 200


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 1 IKEMVELPLR 10
IKE+VELPL+
Sbjct: 160 IKEVVELPLK 169


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 IKEMVELPLR 10
IKE+VELPL+
Sbjct: 160 IKEVVELPLK 169


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 1 IKEMVELPLR 10
IKE+VELPL+
Sbjct: 160 IKEVVELPLK 169


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 IKEMVELPLR 10
IKE+VELPL+
Sbjct: 160 IKEVVELPLK 169


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IKEMVELPLR 10
IKE+VELPL+
Sbjct: 160 IKEVVELPLK 169


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 IKEMVELPLR 10
++EMVELP++
Sbjct: 201 VREMVELPMK 210


Query: 1 IKEMVELPL 9
+KE VE PL
Sbjct: 474 VKESVEWPL 482


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IKEMVELPLR 10
++EM+ELPL+
Sbjct: 194 VREMIELPLK 203


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 IKEMVELPLR 10
+KE VELPL+
Sbjct: 163 VKETVELPLK 172


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IKEMVELPLR 10
I+E+VELPL+
Sbjct: 182 IREVVELPLK 191


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 IKEMVELPLR 10
I+E VELPL+
Sbjct: 165 IREAVELPLK 174


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IKEMVELPLR 10
I+E++ELPL+
Sbjct: 146 IREVIELPLK 155


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 IKEMVELPL 9
I+E VELPL
Sbjct: 165 IREAVELPL 173


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 1 IKEMVELPLR 10
++E VELPL+
Sbjct: 190 VREAVELPLK 199


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 1 IKEMVELPL 9
+KE VELPL
Sbjct: 171 LKETVELPL 179


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IKEMVELPL 9
I+E VELPL
Sbjct: 153 IREAVELPL 161


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IKEMVELPLR 10
I+E+VE P+R
Sbjct: 224 IREIVEWPMR 233


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 IKEMVELPLR 10
++E+VELPL+
Sbjct: 146 LREVVELPLK 155


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IKEMVELPLR 10
++E+VELPL+
Sbjct: 146 LREVVELPLK 155


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IKEMVELPLR 10
++E+VELPL+
Sbjct: 146 LREVVELPLK 155


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 IKEMVELPLR 10
++E+VELPL+
Sbjct: 146 LREVVELPLK 155


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 IKEMVELPLR 10
++E+VELPL+
Sbjct: 146 LREVVELPLK 155


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 IKEMVELPLR 10
++E+VELPL+
Sbjct: 146 LREVVELPLK 155


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IKEMVELPLR 10
++E+VELPL+
Sbjct: 146 LREVVELPLK 155


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 IKEMVELPLR 10
++E VELP++
Sbjct: 160 VRETVELPMK 169


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 IKEMVELPLR 10
++E VELPL+
Sbjct: 150 LREAVELPLK 159


>sp|SECF_METP4|PROTEIN-EXPORT membrane protein SecF|Methanolacinia petrolearia (strain DSM

Query: 2 KEMVELPL 9
K+MV LPL
Sbjct: 14 KQMVALPL 21


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 IKEMVELPL 9
I+E VELP+
Sbjct: 165 IREAVELPM 173


>sp|Y1115_METJA|UNCHARACTERIZED protein MJ1115|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IKEMVELPL 9
IKE V LPL
Sbjct: 80 IKEEVSLPL 88


>sp|PYRF_METJA|OROTIDINE 5'-phosphate decarboxylase|Methanocaldococcus jannaschii (strain

Query: 1 IKEMVELPL 9
IKE+ ELP+
Sbjct: 155 IKEIAELPV 163


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IKEMVELPLR 10
++E +ELPL+
Sbjct: 149 LREAIELPLK 158


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IKEMVELPLR 10
++E +ELPL+
Sbjct: 152 LREAIELPLK 161


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 IKEMVELPLR 10
++E +ELPL+
Sbjct: 149 LREAIELPLK 158


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IKEMVELPLR 10
++E +ELPL+
Sbjct: 150 LREAIELPLK 159


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 1 IKEMVELPLR 10
++E +ELPL+
Sbjct: 151 LREAIELPLK 160


>sp|AKSA_METKA|HOMOCITRATE synthase AksA|Methanopyrus kandleri (strain AV19 /

Query: 1 IKEMVELPL 9
I+E+V+LP+
Sbjct: 197 IREVVDLPI 205


>sp|RL30_METMP|LARGE ribosomal subunit protein uL30|Methanococcus maripaludis (strain

Query: 1 IKEMVELPL 9
+KE+ ELP+
Sbjct: 84 VKELTELPV 92


>sp|RL30_METM7|LARGE ribosomal subunit protein uL30|Methanococcus maripaludis (strain

Query: 1 IKEMVELPL 9
+KE+ ELP+
Sbjct: 84 VKELTELPV 92


>sp|RL30_METM5|LARGE ribosomal subunit protein uL30|Methanococcus maripaludis (strain

Query: 1 IKEMVELPL 9
+KE+ ELP+
Sbjct: 84 VKELTELPV 92


>sp|RS6E_PYRCJ|SMALL ribosomal subunit protein eS6|Pyrobaculum calidifontis (strain

Query: 1 IKEMVELP 8
+KE++ELP
Sbjct: 43 LKELIELP 50


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 IKEMVELPLR 10
I+E+VE PL+
Sbjct: 191 IREVVEKPLK 200


>sp|RS6E_PYRNV|SMALL ribosomal subunit protein eS6|Pyrobaculum neutrophilum (strain

Query: 1 IKEMVELP 8
+KE++ELP
Sbjct: 43 LKELIELP 50


>sp|RS6E_CALMQ|SMALL ribosomal subunit protein eS6|Caldivirga maquilingensis (strain

Query: 1 IKEMVELP 8
IKE+++LP
Sbjct: 43 IKEIIDLP 50


>sp|HMC1_METBA|CHROMOSOMAL protein MC1|Methanosarcina barkeri

Query: 2 KEMVELP 8
KEMVE P
Sbjct: 62 KEMVEAP 68


>sp|Y1155_METJA|UPF0313 protein MJ1155|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IKEMVEL 7
IKEM+EL
Sbjct: 491 IKEMIEL 497




45|Sequence|221|230|ELPLRHPALF

>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 ELPLRHPALF 10
ELP+RHP LF
Sbjct: 196 ELPMRHPELF 205


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ELPLRHPALF 10
ELPL+HP LF
Sbjct: 207 ELPLKHPELF 216


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ELPLRHPALF 10
ELPL+HP LF
Sbjct: 187 ELPLKHPELF 196


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ELPLRHPALF 10
ELPL+HP LF
Sbjct: 157 ELPLKHPELF 166


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ELPLRHPALF 10
ELPL+HP LF
Sbjct: 199 ELPLKHPELF 208


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ELPLRHPALF 10
ELPL+HP LF
Sbjct: 155 ELPLKHPELF 164


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 ELPLRHPALF 10
ELPL+HP LF
Sbjct: 155 ELPLKHPELF 164


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ELPLRHPALF 10
ELPL+HP LF
Sbjct: 154 ELPLKHPELF 163


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 ELPLRHPALF 10
ELPL+HP LF
Sbjct: 154 ELPLKHPELF 163


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 1 ELPLRHPALF 10
ELPL+HP LF
Sbjct: 156 ELPLKHPELF 165


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ELPLRHPALF 10
E P+RHP LF
Sbjct: 229 EWPMRHPELF 238


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 ELPLRHPALF 10
ELP++HP +F
Sbjct: 206 ELPMKHPQIF 215


>sp|AATB_METKA|A-TYPE ATP synthase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 ELPLRHP 7
ELPLRHP
Sbjct: 640 ELPLRHP 646


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 ELPLRHPALF 10
ELP++ P LF
Sbjct: 165 ELPMKDPGLF 174


>sp|HIS8_THEKO|HISTIDINOL-PHOSPHATE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 LRHPALF 10
LRHP LF
Sbjct: 247 LRHPGLF 253


>sp|RRP42_SACI7|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 ELPLRHPAL 9
+LPL HP +
Sbjct: 190 KLPLNHPVV 198


>sp|RRP42_SACI6|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.4 /

Query: 1 ELPLRHPAL 9
+LPL HP +
Sbjct: 190 KLPLNHPVV 198


>sp|RRP42_SACI4|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.14.25 /

Query: 1 ELPLRHPAL 9
+LPL HP +
Sbjct: 190 KLPLNHPVV 198


>sp|RRP42_SACI3|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.27)

Query: 1 ELPLRHPAL 9
+LPL HP +
Sbjct: 190 KLPLNHPVV 198


>sp|RRP42_SACI2|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 ELPLRHPAL 9
+LPL HP +
Sbjct: 190 KLPLNHPVV 198


>sp|RRP42_SACI1|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 ELPLRHPAL 9
+LPL HP +
Sbjct: 190 KLPLNHPVV 198


>sp|TRPD_METKA|ANTHRANILATE phosphoribosyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 ELPLRHPAL 9
ELP+ HP +
Sbjct: 283 ELPVDHPKV 291


>sp|LEUD2_METKA|3-ISOPROPYLMALATE dehydratase small subunit 2|Methanopyrus kandleri (strain AV19 /

Query: 1 ELPLRHPALF 10
E+PLR P F
Sbjct: 134 EVPLREPPEF 143


>sp|MCRB_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain

Query: 3 PLRHPAL 9
PLR+PA+
Sbjct: 29 PLRNPAI 35


>sp|MCRB_METTH|METHYL-COENZYME M reductase I subunit|Methanothermobacter thermautotrophicus

Query: 3 PLRHPAL 9
PLR+PA+
Sbjct: 29 PLRNPAI 35


>sp|CHEF1_HALS3|TAXIS protein CheF1|Halobacterium salinarum (strain ATCC 29341

Query: 1 ELPLRHPAL 9
EL ++HPA+
Sbjct: 112 ELQVKHPAV 120


>sp|PDXT_PYRIL|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrobaculum islandicum (strain

Query: 3 PLRHPAL 9
PL+HP L
Sbjct: 160 PLKHPEL 166


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 1 ELPLRHPAL 9
ELP R PAL
Sbjct: 363 ELPERPPAL 371


>sp|MALG_THELN|TREHALOSE/MALTOSE transport system permease protein|Thermococcus litoralis (strain

Query: 2 LPLRHPALF 10
LPL PALF
Sbjct: 188 LPLSAPALF 196




46|Sequence|226|235|HPALFKAIGV

>sp|ATGT_PICTO|TRNA-GUANINE(15) transglycosylase|Picrophilus torridus (strain ATCC 700027

Query: 1 HPALFKA 7
HPALFKA
Sbjct: 327 HPALFKA 333


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 1 HPALFKAIGV 10
HP LF+ +G+
Sbjct: 161 HPELFEKVGI 170


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HPALFKAIGV 10
HP LF+ +G+
Sbjct: 192 HPELFEKVGI 201


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 HPALFKAIGV 10
HP LF+ +G+
Sbjct: 160 HPELFEKVGI 169


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HPALFKAIGV 10
HP LF+ +G+
Sbjct: 160 HPELFEQVGI 169


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HPALFKAIGV 10
HP LF+ +G+
Sbjct: 162 HPELFEEVGI 171


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HPALFKAIGV 10
HP LF+ +G+
Sbjct: 159 HPELFEEVGI 168


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 HPALFKAIGV 10
HP LF+ +G+
Sbjct: 159 HPELFEEVGI 168


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 HPALFKAIGV 10
HP LF+ +G+
Sbjct: 201 HPELFEKLGI 210


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 HPALFKAIGV 10
HP LF+ +G+
Sbjct: 234 HPELFQRLGI 243


>sp|ILVD_PYRAB|DIHYDROXY-ACID dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 1 HPALFKAIGV 10
H ALFKA+G+
Sbjct: 15 HRALFKAMGL 24


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HPALFKAIGV 10
HP LF+ +G+
Sbjct: 212 HPELFERLGI 221


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HPALFKAIGV 10
+P LFK IG+
Sbjct: 156 NPELFKEIGI 165


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HPALFKAIGV 10
HP LF+ +G+
Sbjct: 204 HPELFQRLGI 213


>sp|THYX_SULTO|FLAVIN-DEPENDENT thymidylate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HPALFKAIG 9
HP LF+ +G
Sbjct: 192 HPRLFRYVG 200


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 HPALFKAIGV 10
HP +F+ +G+
Sbjct: 211 HPQIFQKLGI 220


>sp|THYX_SACS2|FLAVIN-DEPENDENT thymidylate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HPALFKAIG 9
HP LFK G
Sbjct: 193 HPRLFKYTG 201


>sp|THYX_SULAC|FLAVIN-DEPENDENT thymidylate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 HPALFKAIG 9
HP LFK G
Sbjct: 192 HPRLFKYAG 200


>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HPALFKAIG 9
H +LFKA+G
Sbjct: 15 HRSLFKAMG 23


>sp|Y1038_PYRHO|PROBABLE ABC transporter permease protein|Pyrococcus horikoshii (strain ATCC

Query: 2 PALFKAIGV 10
PA FK IG+
Sbjct: 138 PAFFKLIGI 146


>sp|AROE_PYRAE|SHIKIMATE dehydrogenase (NADP(+))|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 HPALFKAIGV 10
H A FKA+G+
Sbjct: 20 HTASFKALGI 29


>sp|ILVD_HALMA|DIHYDROXY-ACID dehydratase|Haloarcula marismortui (strain ATCC 43049

Query: 1 HPALFKAIG 9
H A+F+A+G
Sbjct: 30 HRAMFRAMG 38


>sp|RFCL_METLZ|REPLICATION factor C large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 2 PALFKAIGV 10
P F+AIGV
Sbjct: 150 PVPFRAIGV 158


>sp|AROE_PYRNV|SHIKIMATE dehydrogenase (NADP(+))|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 HPALFKAIGV 10
H A FKA+GV
Sbjct: 20 HNASFKALGV 29


>sp|AROE_THEKO|SHIKIMATE dehydrogenase (NADP(+))|Thermococcus kodakarensis (strain ATCC

Query: 1 HPALFKAIGV 10
H A F+A+G+
Sbjct: 25 HNAAFRALGI 34


>sp|ILVD_NATPD|DIHYDROXY-ACID dehydratase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 HPALFKAIG 9
H A+F+A+G
Sbjct: 41 HRAMFRAMG 49


>sp|GLPK_PYRAB|GLYCEROL kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 PALFKAIGV 10
PA KAIG+
Sbjct: 70 PAQIKAIGI 78


>sp|SYFB_HALMA|PHENYLALANINE--TRNA ligase beta subunit|Haloarcula marismortui (strain ATCC 43049

Query: 2 PALFKAIGV 10
PA++ AIG+
Sbjct: 206 PAIYDAIGL 214


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 PALFKAIGV 10
P LF+ +G+
Sbjct: 171 PGLFETVGI 179


>sp|RNFA_METAC|ION-TRANSLOCATING oxidoreductase complex subunit A|Methanosarcina acetivorans (strain

Query: 2 PALFKAIGV 10
PAL++++G+
Sbjct: 101 PALYRSLGI 109


>sp|HIS7_METKA|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 3 ALFKAIG 9
A+FKA+G
Sbjct: 171 AMFKAVG 177


>sp|GSA_METLZ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 HPALFKAI 8
HPA+ KAI
Sbjct: 64 HPAIQKAI 71


>sp|HIS7_METAR|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanocella arvoryzae (strain DSM 22066

Query: 3 ALFKAIGV 10
A+FKA+G+
Sbjct: 164 AMFKALGL 171




47|Sequence|231|240|KAIGVKPPRG

>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 AIGVKPPRG 10
A+GV+PP G
Sbjct: 180 AVGVEPPSG 188


>sp|PYRI_AERPE|ASPARTATE carbamoyltransferase regulatory chain|Aeropyrum pernix (strain

Query: 1 KAIGVKPPRG 10
KA+G+ PPRG
Sbjct: 30 KALGLLPPRG 39


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IGVKPPRG 10
I V+PPRG
Sbjct: 501 ISVQPPRG 508


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KAIGVKPPRG 10
+ IGV+PP+G
Sbjct: 161 REIGVEPPKG 170


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 KAIGVKPPRG 10
+ IGV+PP+G
Sbjct: 161 REIGVEPPKG 170


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KAIGVKPPRG 10
+ IGV+PP+G
Sbjct: 161 REIGVEPPKG 170


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KAIGVKPPRG 10
+ IGV+PP+G
Sbjct: 161 REIGVEPPKG 170


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 KAIGVKPPRG 10
+ IGV+PP+G
Sbjct: 161 REIGVEPPKG 170


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 KAIGVKPPRG 10
+ IGV+PP+G
Sbjct: 161 REIGVEPPKG 170


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 KAIGVKPPRG 10
+ IGV+PP+G
Sbjct: 161 REIGVEPPKG 170


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KAIGVKPPRG 10
K IG+ PP+G
Sbjct: 161 KEIGIDPPKG 170


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 3 IGVKPPRG 10
IGV+PP+G
Sbjct: 481 IGVRPPKG 488


Query: 3 IGVKPPRG 10
+G++PP+G
Sbjct: 208 LGIEPPKG 215


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 IGVKPPRG 10
IG++PP+G
Sbjct: 188 IGIEPPKG 195


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 3 IGVKPPRG 10
IG++PP+G
Sbjct: 207 IGIEPPKG 214


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KAIGVKPPRG 10
+A +KPPRG
Sbjct: 482 RAANIKPPRG 491


Query: 3 IGVKPPRG 10
+G++PP+G
Sbjct: 211 LGIEPPKG 218


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KAIGVKPPRG 10
+ IG+ PP+G
Sbjct: 180 EKIGINPPKG 189


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 IGVKPPRG 10
IG++PP+G
Sbjct: 188 IGIEPPKG 195


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 KAIGVKPPRG 10
+ +GV+PP+G
Sbjct: 206 EKVGVEPPKG 215


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KAIGVKPPRG 10
+ +G+ PP+G
Sbjct: 180 EKVGISPPKG 189


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 KAIGVKPPRG 10
+ +G++PP+G
Sbjct: 180 RKMGIEPPKG 189


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 1 KAIGVKPPR 9
KA+G+KP R
Sbjct: 345 KALGIKPSR 353


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 IGVKPPRG 10
IG++PP+G
Sbjct: 180 IGIEPPKG 187


>sp|ENDA_SACI6|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KAIGVKPPRG 10
KAIG+ P+G
Sbjct: 30 KAIGISKPKG 39


>sp|ENDA_SACI4|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KAIGVKPPRG 10
KAIG+ P+G
Sbjct: 30 KAIGISKPKG 39


>sp|ENDA_SACI3|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain M.16.27)

Query: 1 KAIGVKPPRG 10
KAIG+ P+G
Sbjct: 30 KAIGISKPKG 39


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 KAIGVKPPRG 10
+ +G+ PP G
Sbjct: 175 ETVGINPPSG 184


>sp|Y887_METTH|UPF0104 membrane protein MTH_887|Methanothermobacter thermautotrophicus

Query: 2 AIGVKPP 8
A+GV PP
Sbjct: 268 AVGVSPP 274


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 1 KAIGVKPPRG 10
+ +G++PP+G
Sbjct: 186 QKVGIEPPKG 195


>sp|RS17_METKA|SMALL ribosomal subunit protein uS17|Methanopyrus kandleri (strain AV19

Query: 3 IGVKPPR 9
+GVKPPR
Sbjct: 13 LGVKPPR 19


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 1 KAIGVKPPRG 10
+ +G++PP+G
Sbjct: 166 EKVGIEPPKG 175


>sp|GLCD2_CALMQ|GLUCOSE 1-dehydrogenase 2|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 KAIGVKPPR 9
KAI VKPP+
Sbjct: 2 KAIVVKPPK 10


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KAIGVKPPRG 10
+ +G++PP+G
Sbjct: 165 EQVGIEPPKG 174


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IGVKPPRG 10
+G++PP+G
Sbjct: 199 VGIEPPKG 206


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 3 IGVKPPRG 10
+G+ PP G
Sbjct: 179 VGIDPPSG 186


>sp|GLCDH_SACSO|GLUCOSE 1-dehydrogenase|Saccharolobus solfataricus (Sulfolobus

Query: 1 KAIGVKPP 8
KAI VKPP
Sbjct: 2 KAIIVKPP 9


>sp|GLCD1_SACS2|GLUCOSE 1-dehydrogenase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KAIGVKPP 8
KAI VKPP
Sbjct: 2 KAIIVKPP 9


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IGVKPPRG 10
+G++PP+G
Sbjct: 170 VGIEPPKG 177


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 IGVKPPRG 10
+G++PP+G
Sbjct: 167 VGIEPPKG 174


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 3 IGVKPPRG 10
+G+ PP G
Sbjct: 181 VGIDPPSG 188


>sp|TRUD_PYRIL|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum islandicum (strain DSM

Query: 3 IGVKPPRG 10
+GVK PRG
Sbjct: 324 VGVKMPRG 331


>sp|Y340_METJA|UNCHARACTERIZED protein MJ0340|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AIGVKPPR 9
A GV+PP+
Sbjct: 190 AYGVEPPK 197


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 3 IGVKPPRG 10
+G+ PP+G
Sbjct: 166 VGIDPPKG 173


>sp|RL1_METTP|LARGE ribosomal subunit protein uL1|Methanothrix thermoacetophila

Query: 1 KAIGVKPPRG 10
KA+ PPRG
Sbjct: 11 KAVSEAPPRG 20


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KAIGVKPPRG 10
+ +G+ PP+G
Sbjct: 167 EEVGIDPPKG 176


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KAIGVKPPRG 10
+ +G+ PP+G
Sbjct: 164 EEVGIDPPKG 173


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KAIGVKPPRG 10
+ +G+ PP+G
Sbjct: 166 RELGIDPPKG 175


>sp|GLCD2_SACS2|GLUCOSE 1-dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KAIGVKPPR 9
KAI VKPP
Sbjct: 2 KAIVVKPPN 10


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 KAIGVKPPRG 10
+ +G++PP+G
Sbjct: 216 QKLGIEPPQG 225


>sp|AATD_PYRHO|A-TYPE ATP synthase subunit D|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 AIGVKPPR 9
AIGVKP +
Sbjct: 83 AIGVKPNK 90


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 KAIGVKPPRG 10
+ +G+ PP+G
Sbjct: 175 EKVGIVPPKG 184


>sp|PYRDB_PYRFU|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus furiosus (strain

Query: 1 KAIGVKPPRG 10
K+IG++P +G
Sbjct: 44 KSIGIEPRKG 53


>sp|PYRDB_THEKO|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Thermococcus kodakarensis

Query: 1 KAIGVKPPRG 10
K+IG++P +G
Sbjct: 47 KSIGIEPRKG 56


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 IGVKPPRG 10
+G+ PP+G
Sbjct: 241 LGIDPPKG 248


>sp|PANE_PYRAE|2-DEHYDROPANTOATE 2-reductase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 AIGVKPPR 9
A+GVK PR
Sbjct: 202 ALGVKMPR 209


>sp|IF2A_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 KAIGVKPPR 9
K IGV P R
Sbjct: 65 KVIGVNPER 73


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 KAIGVKPPRG 10
K +GV PP G
Sbjct: 31 KGMGVWPPFG 40


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 IGVKPPRG 10
+G+ PP+G
Sbjct: 219 LGITPPKG 226




48|Sequence|236|245|KPPRGILLYG

>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KPPRGILLYG 10
KPPRGILL+G
Sbjct: 487 KPPRGILLFG 496


Query: 1 KPPRGILLYG 10
+PP+G+LLYG
Sbjct: 214 EPPKGVLLYG 223


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KPPRGILLYG 10
+PP+GILLYG
Sbjct: 202 EPPKGILLYG 211


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 KPPRGILLYG 10
+PP+G+LLYG
Sbjct: 211 EPPKGVLLYG 220


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KPPRGILLYG 10
+PP+G+LLYG
Sbjct: 191 EPPKGVLLYG 200


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 KPPRGILLYG 10
+PP+G+LLYG
Sbjct: 183 EPPKGVLLYG 192


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KPPRGILLYG 10
+PP+G+LLYG
Sbjct: 191 EPPKGVLLYG 200


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 KPPRGILLYG 10
+PP+G+LLYG
Sbjct: 166 EPPKGVLLYG 175


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KPPRGILLYG 10
+PP+G+LLYG
Sbjct: 166 EPPKGVLLYG 175


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KPPRGILLYG 10
+PP+G+LLYG
Sbjct: 166 EPPKGVLLYG 175


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 KPPRGILLYG 10
+PP+G+LLYG
Sbjct: 166 EPPKGVLLYG 175


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 KPPRGILLYG 10
+PP+G+LLYG
Sbjct: 166 EPPKGVLLYG 175


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PPRGILLYG 10
PP+GILLYG
Sbjct: 245 PPKGILLYG 253


Query: 2 PPRGILLYG 10
PP+GILL+G
Sbjct: 520 PPKGILLFG 528


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 KPPRGILLYG 10
+PP+G+LLYG
Sbjct: 166 EPPKGVLLYG 175


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 2 PPRGILLYG 10
PP+G+LLYG
Sbjct: 181 PPKGVLLYG 189


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PPRGILLYG 10
PP+G+LLYG
Sbjct: 186 PPKGVLLYG 194


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PPRGILLYG 10
PP+G+LLYG
Sbjct: 186 PPKGVLLYG 194


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 1 KPPRGILLYG 10
+PP+G+LLYG
Sbjct: 210 EPPKGVLLYG 219


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 2 PPRGILLYG 10
PP+G+LLYG
Sbjct: 181 PPKGVLLYG 189


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 2 PPRGILLYG 10
PP+G+LLYG
Sbjct: 181 PPKGVLLYG 189


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 2 PPRGILLYG 10
PP+G+LLYG
Sbjct: 181 PPKGVLLYG 189


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 2 PPRGILLYG 10
PP+G+LLYG
Sbjct: 181 PPKGVLLYG 189


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 1 KPPRGILLYG 10
+PP+G+LLYG
Sbjct: 191 EPPKGVLLYG 200


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KPPRGILLYG 10
+PP+G+LLYG
Sbjct: 166 EPPKGVLLYG 175


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KPPRGILLYG 10
+PP+G+LLYG
Sbjct: 170 EPPKGVLLYG 179


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KPPRGILLYG 10
+PP+G+LLYG
Sbjct: 173 EPPKGVLLYG 182


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 2 PPRGILLYG 10
PP G+LLYG
Sbjct: 185 PPSGVLLYG 193


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 2 PPRGILLYG 10
PP G+LLYG
Sbjct: 183 PPSGVLLYG 191


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KPPRGILLYG 10
+PP+G+LLYG
Sbjct: 170 EPPKGVLLYG 179


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 1 KPPRGILLYG 10
+PP+G+LLYG
Sbjct: 171 EPPKGVLLYG 180


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 2 PPRGILLYG 10
PP+G+LLYG
Sbjct: 170 PPKGVLLYG 178


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 KPPRGILLYG 10
+PP+G+LL+G
Sbjct: 484 RPPKGVLLFG 493


Query: 1 KPPRGILLYG 10
+PP+G+LL G
Sbjct: 211 EPPKGVLLVG 220


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PPRGILLYG 10
PP+G+LLYG
Sbjct: 173 PPKGVLLYG 181


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PPRGILLYG 10
PP+G+LLYG
Sbjct: 167 PPKGVLLYG 175


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 KPPRGILLYG 10
+PP G+LLYG
Sbjct: 494 EPPAGVLLYG 503


Query: 1 KPPRGILLYG 10
+PP+G+LL+G
Sbjct: 221 EPPQGVLLHG 230


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 KPPRGILLYG 10
+PP+G+LL+G
Sbjct: 185 EPPKGVLLHG 194


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PPRGILLYG 10
PP+G+LLYG
Sbjct: 170 PPKGVLLYG 178


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PRGILLYG 10
PRGIL+YG
Sbjct: 137 PRGILVYG 144


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PPRGILLYG 10
PP+G++LYG
Sbjct: 223 PPKGVILYG 231


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 KPPRGILLYG 10
+PP G+LL+G
Sbjct: 184 EPPSGVLLHG 193


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 PPRGILLYG 10
PP G+LL+G
Sbjct: 181 PPSGVLLHG 189


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PPRGILLYG 10
PP+G+LL+G
Sbjct: 172 PPKGVLLHG 180


>sp|CDC6Q_HALMA|ORC1-TYPE DNA replication protein 17|Haloarcula marismortui (strain ATCC

Query: 1 KPPRGILLYG 10
+PP I++YG
Sbjct: 63 QPPNSIIIYG 72


>sp|CDC6A_HALMA|ORC1-TYPE DNA replication protein 1|Haloarcula marismortui (strain ATCC

Query: 2 PPRGILLYG 10
PP+ + LYG
Sbjct: 50 PPKNLFLYG 58


>sp|CDC6I_HALMA|ORC1-TYPE DNA replication protein 9|Haloarcula marismortui (strain ATCC

Query: 2 PPRGILLYG 10
PP ++LYG
Sbjct: 67 PPNSVILYG 75


>sp|CDC6G_HALMA|ORC1-TYPE DNA replication protein 7|Haloarcula marismortui (strain ATCC

Query: 3 PRGILLYG 10
PR I LYG
Sbjct: 49 PRNIFLYG 56


>sp|DPCKG_PYRCJ|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PPRGILLYG 10
PPR I+ YG
Sbjct: 132 PPRSIVAYG 140


>sp|HYD1A_PYRFU|SULFHYDROGENASE 1 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PRGILLYG 10
PRGIL+Y
Sbjct: 354 PRGILVYA 361


>sp|GYAR_THELN|GLYOXYLATE reductase|Thermococcus litoralis (strain ATCC 51850

Query: 2 PPRGILL 8
PPRG+LL
Sbjct: 34 PPRGVLL 40


>sp|Y114_METJA|UNCHARACTERIZED protein MJ0114|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PRGILLYG 10
P G+LL+G
Sbjct: 192 PEGVLLFG 199


>sp|TRUA_PYRFU|TRNA pseudouridine synthase A|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PPRGILLY 9
PP G+LL+
Sbjct: 212 PPEGLLLW 219


>sp|DPCKG_METTH|GTP-DEPENDENT dephospho-CoA kinase|Methanothermobacter thermautotrophicus (strain

Query: 2 PPRGILLYG 10
PP ++LYG
Sbjct: 127 PPDTVILYG 135


>sp|DPCKG_PYRNV|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PPRGILLYG 10
PPR +++YG
Sbjct: 132 PPRSLVVYG 140


>sp|DPCKG_PYRAE|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PPRGILLYG 10
PP+ I+ YG
Sbjct: 104 PPKSIVAYG 112


>sp|DPCKG_PYRAR|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PPRGILLYG 10
PPR ++ YG
Sbjct: 132 PPRSVVAYG 140


>sp|Y431_NANEQ|UPF0215 protein NEQ431|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 RGILLYG 10
RGI+LYG
Sbjct: 68 RGIILYG 74


>sp|Y1547_METJA|PUTATIVE protein adenylyltransferase MJ1547|Methanocaldococcus jannaschii

Query: 5 GILLYG 10
GILLYG
Sbjct: 6 GILLYG 11


>sp|DPCKG_METMA|GTP-DEPENDENT dephospho-CoA kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PPRGILLYG 10
PP ++LYG
Sbjct: 139 PPGSVVLYG 147


>sp|CAS1D_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 4|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KPPRGIL 7
KPP G+L
Sbjct: 20 KPPEGLL 26


>sp|RFCL_METKA|REPLICATION factor C large subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 PRGILLYG 10
PR +LL+G
Sbjct: 41 PRAVLLHG 48


>sp|TRUD_PYRIL|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum islandicum (strain DSM

Query: 1 KPPRGILLYG 10
K PRG+ +YG
Sbjct: 353 KMPRGLRVYG 362


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PRGILLYG 10
P+G L+YG
Sbjct: 727 PKGELIYG 734


>sp|TRUD_PYRAE|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum aerophilum (strain ATCC

Query: 1 KPPRGILLYG 10
K PRG+ +YG
Sbjct: 353 KMPRGLRVYG 362


>sp|TRUA_PYRAB|TRNA pseudouridine synthase A|Pyrococcus abyssi (strain GE5 /

Query: 2 PPRGILL 8
PP G+LL
Sbjct: 212 PPEGLLL 218


>sp|SRP54_PYRNV|SIGNAL recognition particle 54 kDa|Pyrobaculum neutrophilum (strain DSM

Query: 2 PPRGILLY 9
PPR LLY
Sbjct: 68 PPREYLLY 75


>sp|DPCKG_PYRIL|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PPRGILLYG 10
PP +++YG
Sbjct: 132 PPHSVVVYG 140


>sp|TOP6A_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 2 PPRGILLYG 10
P RGIL+ G
Sbjct: 55 PERGILVIG 63


>sp|FAU1_NATPD|PROBABLE ribonuclease FAU-1|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PRGILLYG 10
PRG + YG
Sbjct: 87 PRGAVFYG 94


>sp|Y04A_METJA|UNCHARACTERIZED protein MJ0047.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KPPRGILL 8
PPRG++L
Sbjct: 36 HPPRGLIL 43


>sp|YF9A_METJA|UNCHARACTERIZED protein MJ1597.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PPRGILL 8
PPRG++L
Sbjct: 98 PPRGLIL 104


Query: 2 PPRGILL 8
PPRG++L
Sbjct: 120 PPRGLIL 126


>sp|RF1_THEAC|PEPTIDE chain release factor subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 KPPRGILLYG 10
KP G+ +YG
Sbjct: 293 KPDGGLAIYG 302




49|Sequence|241|250|ILLYGPPGTG

>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILLYGPPGTG 10
ILLYGPPGTG
Sbjct: 207 ILLYGPPGTG 216


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ILLYGPPGTG 10
ILLYGPPGTG
Sbjct: 249 ILLYGPPGTG 258


Query: 1 ILLYGPPGTG 10
ILL+GPPGTG
Sbjct: 524 ILLFGPPGTG 533


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ILLYGPPGTG 10
+LLYGPPGTG
Sbjct: 171 VLLYGPPGTG 180


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 ILLYGPPGTG 10
+LLYGPPGTG
Sbjct: 171 VLLYGPPGTG 180


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 ILLYGPPGTG 10
+LLYGPPGTG
Sbjct: 171 VLLYGPPGTG 180


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 ILLYGPPGTG 10
+LLYGPPGTG
Sbjct: 171 VLLYGPPGTG 180


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 ILLYGPPGTG 10
+LLYGPPGTG
Sbjct: 171 VLLYGPPGTG 180


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 ILLYGPPGTG 10
+LLYGPPGTG
Sbjct: 171 VLLYGPPGTG 180


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 ILLYGPPGTG 10
+LLYGPPGTG
Sbjct: 171 VLLYGPPGTG 180


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ILLYGPPGTG 10
+LLYGPPGTG
Sbjct: 185 VLLYGPPGTG 194


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 ILLYGPPGTG 10
+LLYGPPGTG
Sbjct: 188 VLLYGPPGTG 197


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ILLYGPPGTG 10
+LLYGPPGTG
Sbjct: 185 VLLYGPPGTG 194


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 ILLYGPPGTG 10
+LLYGPPGTG
Sbjct: 190 VLLYGPPGTG 199


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 ILLYGPPGTG 10
+LLYGPPGTG
Sbjct: 185 VLLYGPPGTG 194


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 ILLYGPPGTG 10
+LLYGPPGTG
Sbjct: 185 VLLYGPPGTG 194


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 1 ILLYGPPGTG 10
+LLYGPPGTG
Sbjct: 185 VLLYGPPGTG 194


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 ILLYGPPGTG 10
+LLYGPPGTG
Sbjct: 216 VLLYGPPGTG 225


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 ILLYGPPGTG 10
+LLYGPPGTG
Sbjct: 190 VLLYGPPGTG 199


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 1 ILLYGPPGTG 10
+LLYGPPGTG
Sbjct: 215 VLLYGPPGTG 224


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 1 ILLYGPPGTG 10
+LLYGPPGTG
Sbjct: 196 VLLYGPPGTG 205


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 1 ILLYGPPGTG 10
+LLYGPPGTG
Sbjct: 189 VLLYGPPGTG 198


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 1 ILLYGPPGTG 10
+LLYGPPGTG
Sbjct: 187 VLLYGPPGTG 196


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ILLYGPPGTG 10
+LLYGPPGTG
Sbjct: 178 VLLYGPPGTG 187


>sp|RFCL_NANEQ|REPLICATION factor C large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 ILLYGPPGTG 10
+LLYGPPGTG
Sbjct: 71 LLLYGPPGTG 80


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ILLYGPPGTG 10
+LLYGPPGTG
Sbjct: 171 VLLYGPPGTG 180


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 ILLYGPPGTG 10
+LLYGPPGTG
Sbjct: 499 VLLYGPPGTG 508


Query: 1 ILLYGPPGTG 10
+LL+GPPGTG
Sbjct: 226 VLLHGPPGTG 235


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ILLYGPPGTG 10
+LLYGPPGTG
Sbjct: 219 VLLYGPPGTG 228


Query: 1 ILLYGPPGTG 10
ILL+GPPGTG
Sbjct: 492 ILLFGPPGTG 501


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILLYGPPGTG 10
+L YGPPGTG
Sbjct: 157 VLFYGPPGTG 166


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 ILLYGPPGTG 10
+LL+GPPGTG
Sbjct: 489 VLLFGPPGTG 498


Query: 1 ILLYGPPGTG 10
+LL GPPGTG
Sbjct: 216 VLLVGPPGTG 225


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ILLYGPPGTG 10
++LYGPPGTG
Sbjct: 227 VILYGPPGTG 236


Query: 2 LLYGPPGTG 10
LLYGPPG G
Sbjct: 505 LLYGPPGVG 513


>sp|RFCS_PYRCJ|REPLICATION factor C small subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ILLYGPPGTG 10
+L YGPPGTG
Sbjct: 40 LLFYGPPGTG 49


>sp|RFCS2_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ILLYGPPGTG 10
+L YGPPGTG
Sbjct: 40 LLFYGPPGTG 49


>sp|RFCS2_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ILLYGPPGTG 10
+L YGPPGTG
Sbjct: 40 LLFYGPPGTG 49


>sp|RFCS2_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ILLYGPPGTG 10
+L YGPPGTG
Sbjct: 40 LLFYGPPGTG 49


>sp|RFCS1_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ILLYGPPGTG 10
+L YGPPGTG
Sbjct: 40 LLFYGPPGTG 49


>sp|RFCS1_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ILLYGPPGTG 10
+L YGPPGTG
Sbjct: 40 LLFYGPPGTG 49


>sp|RFCS1_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ILLYGPPGTG 10
+L YGPPGTG
Sbjct: 40 LLFYGPPGTG 49


>sp|RFCL_SULTO|REPLICATION factor C large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ILLYGPPGTG 10
+LLYGPPG G
Sbjct: 44 VLLYGPPGVG 53


>sp|RFCL_SULAC|REPLICATION factor C large subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 ILLYGPPGTG 10
+LLYGPPG G
Sbjct: 44 VLLYGPPGVG 53


>sp|RFCL_METKA|REPLICATION factor C large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 ILLYGPPGTG 10
+LL+GPPGTG
Sbjct: 44 VLLHGPPGTG 53


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 ILLYGPPGTG 10
+LL+GPPGTG
Sbjct: 190 VLLHGPPGTG 199


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 ILLYGPPGTG 10
+LL+GPPGTG
Sbjct: 189 VLLHGPPGTG 198


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 ILLYGPPGTG 10
+LL+GPPGTG
Sbjct: 185 VLLHGPPGTG 194


>sp|RFCL_THEPD|REPLICATION factor C large subunit|Thermofilum pendens (strain DSM 2475

Query: 2 LLYGPPGTG 10
LLYGPPG+G
Sbjct: 51 LLYGPPGSG 59


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 ILLYGPPGTG 10
+LLYGPPG G
Sbjct: 175 VLLYGPPGCG 184


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 ILLYGPPGTG 10
+LLYGPPG G
Sbjct: 174 VLLYGPPGCG 183


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ILLYGPPGTG 10
+LLYGPPG G
Sbjct: 174 VLLYGPPGCG 183


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ILLYGPPGTG 10
+LLYGPPG G
Sbjct: 175 VLLYGPPGCG 184


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 1 ILLYGPPGTG 10
+LLYGPPG G
Sbjct: 176 VLLYGPPGCG 185


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ILLYGPPGTG 10
+LLYGPPG G
Sbjct: 177 VLLYGPPGCG 186


>sp|RFCL_METVS|REPLICATION factor C large subunit|Methanococcus vannielii (strain ATCC 35089

Query: 1 ILLYGPPGTG 10
+LL+GPPG+G
Sbjct: 42 VLLFGPPGSG 51


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ILLYGPPGTG 10
IL+YGPPG G
Sbjct: 140 ILVYGPPGCG 149


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ILLYGPPGTG 10
+LL+GPPGTG
Sbjct: 176 VLLHGPPGTG 185


>sp|RFCL_AERPE|REPLICATION factor C large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 LLYGPPGTG 10
LLYGPPG G
Sbjct: 53 LLYGPPGVG 61


>sp|KAD_THEON|ADENYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 ILLYGPPGTG 10
IL++GPPG+G
Sbjct: 3 ILIFGPPGSG 12


>sp|RFCL_METTP|REPLICATION factor C large subunit|Methanothrix thermoacetophila (strain DSM

Query: 1 ILLYGPPGTG 10
++LYGPPG G
Sbjct: 43 LILYGPPGVG 52


>sp|KAD_THESM|ADENYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 ILLYGPPGTG 10
IL++GPPG+G
Sbjct: 3 ILIFGPPGSG 12


>sp|KAD_THEKO|ADENYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ILLYGPPGTG 10
IL++GPPG+G
Sbjct: 3 ILIFGPPGSG 12


>sp|RFCL_METTH|REPLICATION factor C large subunit|Methanothermobacter thermautotrophicus

Query: 1 ILLYGPPGTG 10
+LL GPPGTG
Sbjct: 41 LLLVGPPGTG 50


>sp|CDC6N_HALMA|ORC1-TYPE DNA replication protein 14|Haloarcula marismortui (strain ATCC

Query: 1 ILLYGPPGTG 10
+LLYGP GTG
Sbjct: 54 LLLYGPAGTG 63


>sp|RFCL_SACS2|REPLICATION factor C large subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 ILLYGPPGTG 10
+LL+GPPG G
Sbjct: 43 VLLHGPPGVG 52


>sp|RFCL_SACI7|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 ILLYGPPGTG 10
+LL+GPPG G
Sbjct: 43 VLLHGPPGVG 52


>sp|RFCL_SACI6|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 1 ILLYGPPGTG 10
+LL+GPPG G
Sbjct: 43 VLLHGPPGVG 52


>sp|RFCL_SACI4|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 1 ILLYGPPGTG 10
+LL+GPPG G
Sbjct: 43 VLLHGPPGVG 52


>sp|RFCL_SACI3|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.27)

Query: 1 ILLYGPPGTG 10
+LL+GPPG G
Sbjct: 43 VLLHGPPGVG 52


>sp|RFCL_SACI2|REPLICATION factor C large subunit|Saccharolobus islandicus (strain L.S.2.15

Query: 1 ILLYGPPGTG 10
+LL+GPPG G
Sbjct: 43 VLLHGPPGVG 52


>sp|RFCL_SACI1|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 ILLYGPPGTG 10
+LL+GPPG G
Sbjct: 43 VLLHGPPGVG 52


>sp|CDC65_HALSA|ORC1-TYPE DNA replication protein 5|Halobacterium salinarum (strain ATCC

Query: 1 ILLYGPPGTG 10
+LLYGP GTG
Sbjct: 54 MLLYGPAGTG 63


>sp|RFCL_PYRCJ|REPLICATION factor C large subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ILLYGPPGTG 10
+LL+GPPG G
Sbjct: 59 VLLWGPPGIG 68


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii (strain

Query: 2 LLYGPPGTG 10
L++GPPGTG
Sbjct: 204 LIHGPPGTG 212


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 1 ILLYGPPGTG 10
+LL GPPGTG
Sbjct: 359 LLLIGPPGTG 368


>sp|KAD_PYRFU|ADENYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ILLYGPPGTG 10
IL++GPPG+G
Sbjct: 3 ILIFGPPGSG 12


>sp|KAD_THEGJ|ADENYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 ILLYGPPGTG 10
IL++GPPG+G
Sbjct: 3 ILIFGPPGSG 12


>sp|RFCL_METMP|REPLICATION factor C large subunit|Methanococcus maripaludis (strain DSM

Query: 1 ILLYGPPGTG 10
ILL GPPG+G
Sbjct: 42 ILLAGPPGSG 51


>sp|RFCL_METM7|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 ILLYGPPGTG 10
ILL GPPG+G
Sbjct: 42 ILLAGPPGSG 51


>sp|RFCL_METM6|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 ILLYGPPGTG 10
ILL GPPG+G
Sbjct: 42 ILLAGPPGSG 51


>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 ILLYGPPGTG 10
ILL GPPG+G
Sbjct: 42 ILLAGPPGSG 51


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ILLYGPPGTG 10
+LLYG PGTG
Sbjct: 196 VLLYGLPGTG 205


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ILLYGPPGTG 10
+LLYG PGTG
Sbjct: 196 VLLYGLPGTG 205


>sp|CDC62_METMA|ORC1-TYPE DNA replication protein 2|Methanosarcina mazei (strain ATCC

Query: 2 LLYGPPGTG 10
LL GPPGTG
Sbjct: 56 LLVGPPGTG 64


>sp|CDC62_METAC|ORC1-TYPE DNA replication protein 2|Methanosarcina acetivorans (strain ATCC

Query: 2 LLYGPPGTG 10
LL GPPGTG
Sbjct: 56 LLVGPPGTG 64


>sp|KAD_PYRAB|ADENYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 ILLYGPPGTG 10
IL++GPPG+G
Sbjct: 3 ILIFGPPGSG 12


>sp|KAD_METBF|ADENYLATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ILLYGPPGTG 10
I+L+GPPG G
Sbjct: 3 IILFGPPGAG 12


>sp|KAD_PYRHO|ADENYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ILLYGPPGTG 10
IL++GPPG+G
Sbjct: 3 ILIFGPPGSG 12


>sp|KAD_METMA|ADENYLATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ILLYGPPGTG 10
I+L+GPPG G
Sbjct: 3 IILFGPPGAG 12


>sp|RFCL_PYRAE|REPLICATION factor C large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ILLYGPPGTG 10
ILL GPPG G
Sbjct: 59 ILLAGPPGVG 68


>sp|RFCL_IGNH4|REPLICATION factor C large subunit|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 LLYGPPGTG 10
LL+GPPG G
Sbjct: 47 LLWGPPGVG 55


>sp|RFCL_METMJ|REPLICATION factor C large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 ILLYGPPGTG 10
++LYG PGTG
Sbjct: 39 LILYGKPGTG 48


>sp|RFCL_METJA|REPLICATION factor C large subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ILLYGPPGTG 10
ILL GPPG G
Sbjct: 42 ILLVGPPGCG 51


>sp|KAD_METAC|ADENYLATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ILLYGPPGTG 10
I+L+GPPG G
Sbjct: 3 IILFGPPGAG 12


>sp|RFCL_PICTO|REPLICATION factor C large subunit|Picrophilus torridus (strain ATCC 700027

Query: 1 ILLYGPPGTG 10
++LYG PGTG
Sbjct: 42 LILYGDPGTG 51


>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ILLYGPPGTG 10
+L GPPGTG
Sbjct: 384 LLFVGPPGTG 393


>sp|CDC6_CENSY|ORC1-TYPE DNA replication protein|Cenarchaeum symbiosum (strain A)

Query: 1 ILLYGPPGTG 10
+L+YG PGTG
Sbjct: 70 LLVYGKPGTG 79


>sp|RFCL_PYRHO|REPLICATION factor C large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ILLYGPPGTG 10
+LL GPPG+G
Sbjct: 46 LLLAGPPGSG 55


>sp|RFCL_PYRFU|REPLICATION factor C large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ILLYGPPGTG 10
+LL GPPG+G
Sbjct: 46 LLLAGPPGSG 55


>sp|RFCL_PYRAB|REPLICATION factor C large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 ILLYGPPGTG 10
+LL GPPG+G
Sbjct: 46 LLLAGPPGSG 55


>sp|RFCS_SULTO|REPLICATION factor C small subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ILLYGPPGTG 10
+L GPPGTG
Sbjct: 43 LLFSGPPGTG 52


>sp|RFCS_ARCFU|REPLICATION factor C small subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ILLYGPPGTG 10
+L GPPGTG
Sbjct: 41 LLFSGPPGTG 50


>sp|RFCS_THEPD|REPLICATION factor C small subunit|Thermofilum pendens (strain DSM 2475

Query: 1 ILLYGPPGTG 10
+L GPPGTG
Sbjct: 40 LLFAGPPGTG 49


>sp|RFCS_SULAC|REPLICATION factor C small subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 ILLYGPPGTG 10
+L GPPGTG
Sbjct: 41 LLFAGPPGTG 50


>sp|RFCS_STAMF|REPLICATION factor C small subunit|Staphylothermus marinus (strain ATCC 43588

Query: 1 ILLYGPPGTG 10
+L GPPGTG
Sbjct: 47 LLFAGPPGTG 56


>sp|RFCS_SACS2|REPLICATION factor C small subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 ILLYGPPGTG 10
+L GPPGTG
Sbjct: 44 LLFAGPPGTG 53


>sp|RFCS_NANEQ|REPLICATION factor C small subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 ILLYGPPGTG 10
+L GPPGTG
Sbjct: 38 LLFAGPPGTG 47


>sp|RFCS_METKA|REPLICATION factor C small subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 ILLYGPPGTG 10
+L GPPGTG
Sbjct: 47 LLFAGPPGTG 56


>sp|RFCS_AERPE|REPLICATION factor C small subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 ILLYGPPGTG 10
+L GPPGTG
Sbjct: 43 LLFAGPPGTG 52


>sp|RFCL_PYRAR|REPLICATION factor C large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ILLYGPPGTG 10
+LL GPPG G
Sbjct: 59 VLLAGPPGVG 68


>sp|RFCL_META3|REPLICATION factor C large subunit|Methanococcus aeolicus (strain ATCC

Query: 1 ILLYGPPGTG 10
+LL GPPG G
Sbjct: 41 VLLVGPPGCG 50


>sp|KAD_HALMA|ADENYLATE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 ILLYGPPGTG 10
IL+ GPPG G
Sbjct: 6 ILIVGPPGAG 15


>sp|RADB_METMP|DNA repair and recombination protein|Methanococcus maripaludis

Query: 3 LYGPPGTG 10
+YGPPG G
Sbjct: 18 IYGPPGVG 25


>sp|RADB_METMI|DNA repair and recombination protein|Methanococcus maripaludis

Query: 3 LYGPPGTG 10
+YGPPG G
Sbjct: 18 IYGPPGVG 25


>sp|RADB_METM7|DNA repair and recombination protein|Methanococcus maripaludis

Query: 3 LYGPPGTG 10
+YGPPG G
Sbjct: 18 IYGPPGVG 25


>sp|RADB_METM5|DNA repair and recombination protein|Methanococcus maripaludis

Query: 3 LYGPPGTG 10
+YGPPG G
Sbjct: 18 IYGPPGVG 25


>sp|RADB_METJA|DNA repair and recombination protein|Methanocaldococcus jannaschii

Query: 3 LYGPPGTG 10
+YGPPG G
Sbjct: 18 IYGPPGVG 25


>sp|RADB_METTH|DNA repair and recombination protein|Methanothermobacter

Query: 3 LYGPPGTG 10
YGPPG+G
Sbjct: 35 FYGPPGSG 42


>sp|RFCL_PYRNV|REPLICATION factor C large subunit|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 ILLYGPPGTG 10
+LL GPPG G
Sbjct: 59 VLLAGPPGIG 68


>sp|RFCL_PYRIL|REPLICATION factor C large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ILLYGPPGTG 10
+LL GPPG G
Sbjct: 59 VLLAGPPGIG 68


>sp|RFCL_METST|REPLICATION factor C large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 ILLYGPPGTG 10
+LL GPPG G
Sbjct: 41 LLLMGPPGIG 50


>sp|RFCL_THEKO|REPLICATION factor C large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 ILLYGPPGTG 10
+LL GPPG G
Sbjct: 46 LLLAGPPGVG 55


>sp|RFCL_ARCFU|REPLICATION factor C large subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ILLYGPPGTG 10
+LL GPPG G
Sbjct: 39 LLLAGPPGVG 48


>sp|RADB_METST|DNA repair and recombination protein|Methanosphaera stadtmanae

Query: 3 LYGPPGTG 10
YGPPG+G
Sbjct: 35 FYGPPGSG 42


>sp|RFCL_METS3|REPLICATION factor C large subunit|Methanobrevibacter smithii (strain ATCC

Query: 1 ILLYGPPGTG 10
+LL GPPG G
Sbjct: 41 LLLVGPPGIG 50


>sp|KAD_METBU|ADENYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 ILLYGPPGTG 10
++L+GPPG G
Sbjct: 3 VVLFGPPGAG 12


>sp|LONH_METTH|PUTATIVE lon protease homolog|Methanothermobacter thermautotrophicus

Query: 1 ILLYGPPGTG 10
+LL GPPG G
Sbjct: 49 LLLVGPPGIG 58


>sp|CDC6Z_METTF|ORC1-TYPE DNA replication protein|Methanothermobacter thermautotrophicus

Query: 1 ILLYGPPGTG 10
+L+ GPPG+G
Sbjct: 50 LLIVGPPGSG 59


>sp|CDC6V_METTF|ORC1-TYPE DNA replication protein|Methanothermobacter thermautotrophicus

Query: 1 ILLYGPPGTG 10
+L+ GPPG+G
Sbjct: 50 LLIVGPPGSG 59


>sp|KAD_METAR|ADENYLATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 2 LLYGPPGTG 10
+L+GPPG G
Sbjct: 4 VLFGPPGAG 12


>sp|KCY_SULAC|CYTIDYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ILLYGPPGTG 10
I++ GPPG+G
Sbjct: 3 IIISGPPGSG 12


>sp|KCY_SACS2|CYTIDYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ILLYGPPGTG 10
I++ GPPG+G
Sbjct: 3 IIISGPPGSG 12


>sp|KCY_SACI7|CYTIDYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 ILLYGPPGTG 10
I++ GPPG+G
Sbjct: 3 IIISGPPGSG 12


>sp|KCY_SACI6|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 ILLYGPPGTG 10
I++ GPPG+G
Sbjct: 3 IIISGPPGSG 12


>sp|KCY_SACI4|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 ILLYGPPGTG 10
I++ GPPG+G
Sbjct: 3 IIISGPPGSG 12


>sp|KCY_SACI3|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 ILLYGPPGTG 10
I++ GPPG+G
Sbjct: 3 IIISGPPGSG 12


>sp|KCY_SACI2|CYTIDYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 ILLYGPPGTG 10
I++ GPPG+G
Sbjct: 3 IIISGPPGSG 12


>sp|KCY_SACI1|CYTIDYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 ILLYGPPGTG 10
I++ GPPG+G
Sbjct: 3 IIISGPPGSG 12


>sp|RFCL_METB6|REPLICATION factor C large subunit|Methanoregula boonei (strain DSM 21154

Query: 1 ILLYGPPGTG 10
+LLYG PG G
Sbjct: 39 LLLYGKPGIG 48


>sp|PSTK_METKA|L-SERYL-TRNA(SEC) kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 ILLYGPPGTG 10
++L GPPG+G
Sbjct: 4 LILTGPPGSG 13


>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ILLYGPPGTG 10
+LL GPPG G
Sbjct: 48 LLLVGPPGVG 57


>sp|GLPA1_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A1|Haloferax volcanii

Query: 3 LYGPPGTG 10
LY PPGTG
Sbjct: 320 LYEPPGTG 327


>sp|LONH_THEVO|PUTATIVE lon protease homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ILLYGPPGTG 10
+LL GPPG G
Sbjct: 48 LLLVGPPGVG 57


>sp|CDC61_HALSA|ORC1-TYPE DNA replication protein 1|Halobacterium salinarum (strain ATCC

Query: 2 LLYGPPGTG 10
LLYGP G G
Sbjct: 44 LLYGPSGVG 52


>sp|KCY_SULTO|CYTIDYLATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ILLYGPPGTG 10
I++ GPPG+G
Sbjct: 3 IVISGPPGSG 12


>sp|KAD_METTP|ADENYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ILLYGPPGTG 10
I+L GPPG+G
Sbjct: 3 IVLLGPPGSG 12


>sp|RADB_METS3|DNA repair and recombination protein|Methanobrevibacter smithii

Query: 3 LYGPPGTG 10
++GPPG+G
Sbjct: 35 IFGPPGSG 42


>sp|RFCL_METAC|REPLICATION factor C large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 ILLYGPPGTG 10
++LYGP G G
Sbjct: 51 VILYGPAGIG 60


>sp|RFCL_HALMA|REPLICATION factor C large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 ILLYGPPGTG 10
++LYG PG G
Sbjct: 39 VILYGSPGIG 48


>sp|CDC6C_HALMA|ORC1-TYPE DNA replication protein 3|Haloarcula marismortui (strain ATCC

Query: 1 ILLYGPPGTG 10
++ GPPGTG
Sbjct: 58 VIARGPPGTG 67


>sp|RFCL_METMA|REPLICATION factor C large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ILLYGPPGTG 10
++LYGP G G
Sbjct: 51 VILYGPAGIG 60


>sp|RFCL_STAMF|REPLICATION factor C large subunit|Staphylothermus marinus (strain ATCC 43588

Query: 2 LLYGPPGTG 10
LLYGP G G
Sbjct: 47 LLYGPAGCG 55


>sp|RADB_HALSA|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 3 LYGPPGTG 10
LYGPP G
Sbjct: 31 LYGPPAAG 38


>sp|RADB_HALS3|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 3 LYGPPGTG 10
LYGPP G
Sbjct: 31 LYGPPAAG 38


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ILLYGPPGTG 10
+LL G PGTG
Sbjct: 55 VLLIGEPGTG 64


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 1 ILLYGPPGTG 10
+LL G PGTG
Sbjct: 65 VLLIGEPGTG 74


>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii (strain

Query: 1 ILLYGPPGTG 10
I + GPPG+G
Sbjct: 287 IFVSGPPGSG 296


>sp|KCY_DESA1|CYTIDYLATE kinase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 ILLYGPPGTG 10
I+ GPPG+G
Sbjct: 4 IVFSGPPGSG 13


>sp|PAN2_METTM|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter marburgensis (strain ATCC

Query: 1 ILLYGPPGTG 10
+L +G PGTG
Sbjct: 160 VLFHGSPGTG 169


>sp|PAN2_METTH|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 ILLYGPPGTG 10
+L +G PGTG
Sbjct: 160 VLFHGSPGTG 169


>sp|RAD25_HALSA|PUTATIVE DNA 3'-5' helicase Rad25|Halobacterium salinarum (strain ATCC

Query: 2 LLYGPPGTG 10
+L GPPG+G
Sbjct: 263 VLVGPPGSG 271


>sp|CDC66_HALSA|ORC1-TYPE DNA replication protein 6|Halobacterium salinarum (strain ATCC

Query: 1 ILLYGPPGTG 10
++ GPPGTG
Sbjct: 58 VVARGPPGTG 67


>sp|KCY_IGNH4|CYTIDYLATE kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 ILLYGPPGTG 10
+++ GPPG+G
Sbjct: 4 VVISGPPGSG 13


>sp|RS6E_SACS2|SMALL ribosomal subunit protein eS6|Saccharolobus solfataricus (strain

Query: 1 ILLYGPPG 8
ILL GPPG
Sbjct: 175 ILLSGPPG 182


>sp|RS6E_SACI7|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 1 ILLYGPPG 8
ILL GPPG
Sbjct: 175 ILLSGPPG 182


>sp|RS6E_SACI6|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 1 ILLYGPPG 8
ILL GPPG
Sbjct: 175 ILLSGPPG 182


>sp|RS6E_SACI4|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 1 ILLYGPPG 8
ILL GPPG
Sbjct: 175 ILLSGPPG 182


>sp|RS6E_SACI3|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 1 ILLYGPPG 8
ILL GPPG
Sbjct: 175 ILLSGPPG 182


>sp|RS6E_SACI2|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 1 ILLYGPPG 8
ILL GPPG
Sbjct: 175 ILLSGPPG 182


>sp|RFCL_METHJ|REPLICATION factor C large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 ILLYGPPGTG 10
++LYG PG G
Sbjct: 39 LILYGKPGIG 48


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 ILLYGPPGTG 10
++LYG PG G
Sbjct: 46 VILYGGPGVG 55


>sp|RFCS_METMA|REPLICATION factor C small subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ILLYGPPGTG 10
+L GPPG G
Sbjct: 49 LLFSGPPGVG 58


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ILLYGPPGTG 10
+L GPPG G
Sbjct: 43 LLFSGPPGVG 52


>sp|RFCS_METBF|REPLICATION factor C small subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 ILLYGPPGTG 10
+L GPPG G
Sbjct: 45 LLFSGPPGVG 54


>sp|RFCS_METAR|REPLICATION factor C small subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 ILLYGPPGTG 10
+L GPPG G
Sbjct: 41 LLFSGPPGVG 50


>sp|RFCS_METAC|REPLICATION factor C small subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 ILLYGPPGTG 10
+L GPPG G
Sbjct: 49 LLFSGPPGVG 58


>sp|KCY_METTP|CYTIDYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ILLYGPPGTG 10
I + GPPG+G
Sbjct: 3 ITISGPPGSG 12


>sp|KCY_METPE|CYTIDYLATE kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 ILLYGPPGTG 10
I + GPPG+G
Sbjct: 3 ITISGPPGSG 12


>sp|KCY_METMJ|CYTIDYLATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 ILLYGPPGTG 10
I + GPPG+G
Sbjct: 3 ITISGPPGSG 12


>sp|KCY_ARCFU|CYTIDYLATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ILLYGPPGTG 10
I + GPPG+G
Sbjct: 3 ITISGPPGSG 12


>sp|RFCS_THEKO|REPLICATION factor C small subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 ILLYGPPGTG 10
+L GPPG G
Sbjct: 49 LLFAGPPGVG 58


>sp|RFCS_PYRHO|REPLICATION factor C small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ILLYGPPGTG 10
+L GPPG G
Sbjct: 51 LLFAGPPGVG 60


>sp|RFCS_PYRFU|REPLICATION factor C small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ILLYGPPGTG 10
+L GPPG G
Sbjct: 49 LLFAGPPGVG 58


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 ILLYGPPGTG 10
+L GPPG G
Sbjct: 51 LLFAGPPGVG 60


>sp|RS6E_METS5|SMALL ribosomal subunit protein eS6|Metallosphaera sedula (strain ATCC

Query: 1 ILLYGPPG 8
ILL GPPG
Sbjct: 173 ILLAGPPG 180


>sp|LONB_THEKO|ARCHAEAL Lon protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ILLYGPPGTG 10
+LL G PGTG
Sbjct: 61 VLLIGEPGTG 70


>sp|CDC6_METMJ|ORC1-TYPE DNA replication protein|Methanoculleus marisnigri (strain ATCC

Query: 1 ILLYGPPGTG 10
IL+YG GTG
Sbjct: 63 ILIYGKTGTG 72


>sp|CDC6_METLZ|ORC1-TYPE DNA replication protein|Methanocorpusculum labreanum (strain ATCC

Query: 1 ILLYGPPGTG 10
IL+YG GTG
Sbjct: 63 ILIYGKTGTG 72


>sp|CDC6_METHJ|ORC1-TYPE DNA replication protein|Methanospirillum hungatei JF-1 (strain

Query: 1 ILLYGPPGTG 10
IL+YG GTG
Sbjct: 63 ILIYGKTGTG 72


>sp|CDC6_METB6|ORC1-TYPE DNA replication protein|Methanoregula boonei (strain DSM 21154

Query: 1 ILLYGPPGTG 10
IL+YG GTG
Sbjct: 63 ILIYGKTGTG 72


>sp|CDC6D_HALMA|ORC1-TYPE DNA replication protein 4|Haloarcula marismortui (strain ATCC 43049

Query: 1 ILLYGPPGTG 10
IL+YG GTG
Sbjct: 120 ILIYGKTGTG 129


>sp|CDC67_HALSA|ORC1-TYPE DNA replication protein 7|Halobacterium salinarum (strain ATCC

Query: 1 ILLYGPPGTG 10
IL+YG GTG
Sbjct: 86 ILIYGKTGTG 95


>sp|SUFS_HALVD|CYSTEINE desulfurase|Haloferax volcanii (strain ATCC 29605

Query: 1 ILLYGPPG 8
I +YGPPG
Sbjct: 341 IEIYGPPG 348


>sp|RNZ_PICTO|RIBONUCLEASE Z|Picrophilus torridus (strain ATCC 700027

Query: 3 LYGPPGT 9
++GPPGT
Sbjct: 91 IFGPPGT 97


>sp|RNZ_CENSY|RIBONUCLEASE Z|Cenarchaeum symbiosum (strain A)

Query: 3 LYGPPGT 9
+YGPPGT
Sbjct: 87 IYGPPGT 93


>sp|KCY_HALLT|CYTIDYLATE kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 ILLYGPPGTG 10
I + GPPG+G
Sbjct: 3 ITVSGPPGSG 12


>sp|KCY_AERPE|CYTIDYLATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LLYGPPGTG 10
++ GPPG+G
Sbjct: 1 MISGPPGSG 9


>sp|LONB_ARCFU|ARCHAEAL Lon protease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ILLYGPPGTG 10
++L G PGTG
Sbjct: 50 VMLIGSPGTG 59


>sp|KCY_STAMF|CYTIDYLATE kinase|Staphylothermus marinus (strain ATCC 43588

Query: 1 ILLYGPPGTG 10
I++ GPPG G
Sbjct: 4 IVISGPPGGG 13


>sp|RFCL_METBU|REPLICATION factor C large subunit|Methanococcoides burtonii (strain DSM 6242

Query: 1 ILLYGPPGTG 10
I+L+GP G G
Sbjct: 46 IILHGPAGVG 55


>sp|CDC6_PICTO|ORC1-TYPE DNA replication protein|Picrophilus torridus (strain ATCC 700027

Query: 1 ILLYGPPGTG 10
ILLYG G+G
Sbjct: 57 ILLYGQSGSG 66


>sp|LONB_THEVO|ARCHAEAL Lon protease|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ILLYGPPGTG 10
++L G PGTG
Sbjct: 53 VILIGEPGTG 62


>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ILLYGPPGTG 10
++L G PGTG
Sbjct: 53 VILIGEPGTG 62


>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 2 LLYGPPGTG 10
L YGP G G
Sbjct: 48 LFYGPAGVG 56


>sp|DPCKG_KORCO|GTP-DEPENDENT dephospho-CoA kinase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 ILLYGPPGTG 10
+++YG PG G
Sbjct: 133 VMVYGQPGVG 142


>sp|KCY_HALSA|CYTIDYLATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ILLYGPPGTG 10
+ + GPPG+G
Sbjct: 3 VTISGPPGSG 12


>sp|KCY_HALS3|CYTIDYLATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 ILLYGPPGTG 10
+ + GPPG+G
Sbjct: 3 VTISGPPGSG 12


>sp|KAD_NATPD|ADENYLATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ILLYGPPGTG 10
ILL G PG G
Sbjct: 6 ILLLGAPGAG 15


>sp|CDC61_METMA|ORC1-TYPE DNA replication protein 1|Methanosarcina mazei (strain ATCC

Query: 1 ILLYGPPGTG 10
+L+YG GTG
Sbjct: 62 VLIYGKTGTG 71


>sp|CDC61_METAC|ORC1-TYPE DNA replication protein 1|Methanosarcina acetivorans (strain ATCC

Query: 1 ILLYGPPGTG 10
+L+YG GTG
Sbjct: 62 VLIYGKTGTG 71


>sp|KAD_ARCFU|ADENYLATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ILLYGPPGTG 10
++ GPPG G
Sbjct: 3 LIFLGPPGAG 12


>sp|CDC6H_HALMA|ORC1-TYPE DNA replication protein 8|Haloarcula marismortui (strain ATCC

Query: 1 ILLYGPPGTG 10
+ +YGP G G
Sbjct: 58 VFVYGPTGVG 67


>sp|NTPTH_CALMQ|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 ILLYGPPGTG 10
+ + GPPG G
Sbjct: 5 VFVTGPPGVG 14


>sp|RS6E_STAMF|SMALL ribosomal subunit protein eS6|Staphylothermus marinus (strain ATCC

Query: 1 ILLYGPPG 8
+LL GPPG
Sbjct: 176 VLLSGPPG 183


>sp|Y3143_PYRAE|UPF0273 protein PAE3143|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ILLYGPPGTG 10
+LL G PGTG
Sbjct: 27 VLLSGGPGTG 36


>sp|LONB_HALSA|ARCHAEAL Lon protease|Halobacterium salinarum (strain ATCC 700922

Query: 1 ILLYGPPGTG 10
+++ G PGTG
Sbjct: 113 VMMIGSPGTG 122


>sp|DPCKG_ARCFU|GTP-DEPENDENT dephospho-CoA kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ILLYGPPGTG 10
++LYG PG G
Sbjct: 140 LILYGQPGEG 149


>sp|Y039_METKA|UPF0273 protein MK0039|Methanopyrus kandleri (strain AV19 /

Query: 1 ILLYGPPGTG 10
+LL G PGTG
Sbjct: 27 VLLTGGPGTG 36


>sp|CSD_HALSA|PROBABLE cysteine desulfurase|Halobacterium salinarum (strain ATCC 700922

Query: 3 LYGPPG 8
+YGPPG
Sbjct: 331 VYGPPG 336


>sp|RS6E_SULAC|SMALL ribosomal subunit protein eS6|Sulfolobus acidocaldarius (strain

Query: 1 ILLYGPPG 8
IL+ GPPG
Sbjct: 174 ILVSGPPG 181


>sp|RFCL_NATPD|REPLICATION factor C large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ILLYGPPGTG 10
++L+G PG G
Sbjct: 40 VILHGSPGVG 49


>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 5 GPPGTG 10
GPPG+G
Sbjct: 281 GPPGSG 286


>sp|DPCKG_HYPBU|GTP-DEPENDENT dephospho-CoA kinase|Hyperthermus butylicus (strain DSM 5456

Query: 1 ILLYGPPGTG 10
++LYG PG G
Sbjct: 138 VVLYGLPGKG 147


>sp|TRPD_SACS2|ANTHRANILATE phosphoribosyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 ILLYGPPG 8
IL+YG PG
Sbjct: 214 ILVYGEPG 221


>sp|RFCL_THEAC|REPLICATION factor C large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 ILLYGPPGTG 10
++LYG GTG
Sbjct: 43 LILYGSQGTG 52


>sp|Y1931_PYRFU|UPF0273 protein PF1931|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ILLYGPPGTG 10
+LL G PGTG
Sbjct: 26 VLLSGGPGTG 35


>sp|RS6E_SULTO|SMALL ribosomal subunit protein eS6|Sulfurisphaera tokodaii (strain DSM

Query: 1 ILLYGPPG 8
+LL GPPG
Sbjct: 174 LLLSGPPG 181


>sp|Y1590_THEKO|UPF0273 protein TK1590|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ILLYGPPGTG 10
+LL G PGTG
Sbjct: 26 VLLSGGPGTG 35


>sp|Y258_PYRAB|UPF0273 protein PYRAB02580|Pyrococcus abyssi (strain GE5 /

Query: 1 ILLYGPPGTG 10
+LL G PGTG
Sbjct: 26 VLLSGGPGTG 35


>sp|CDC61_THEAC|PUTATIVE ORC1-type DNA replication protein|Thermoplasma acidophilum

Query: 1 ILLYGPPGTG 10
++LYG GTG
Sbjct: 26 LILYGDSGTG 35


>sp|KAD_HALSA|ADENYLATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ILLYGPPGTG 10
+LL G PG G
Sbjct: 6 VLLLGAPGAG 15


>sp|KAD_HALS3|ADENYLATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 ILLYGPPGTG 10
+LL G PG G
Sbjct: 6 VLLLGAPGAG 15


>sp|Y1359_METJA|UPF0273 protein MJ1359|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILLYGPPGTG 10
+LL G PGTG
Sbjct: 25 VLLSGGPGTG 34


>sp|TRMY_THEGJ|TRNA (pseudouridine(54)-N(1))-methyltransferase|Thermococcus

Query: 1 ILLYGPP 7
+LLYGPP
Sbjct: 54 LLLYGPP 60


>sp|KAD6_ARCFU|PUTATIVE adenylate kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ILLYGPPGTG 10
I L G PGTG
Sbjct: 3 IALTGTPGTG 12


>sp|CFBD_METAC|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina acetivorans

Query: 2 LLYGPPG 8
+L+GPPG
Sbjct: 32 ILHGPPG 38


>sp|Y284_PYRHO|UPF0273 protein PH0284|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ILLYGPPGTG 10
+LL G PGTG
Sbjct: 26 VLLSGGPGTG 35


>sp|RFCL_METBF|REPLICATION factor C large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 ILLYGPPGTG 10
++L+GP G G
Sbjct: 46 VVLHGPAGVG 55


>sp|RFCL_HALWD|REPLICATION factor C large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ILLYGPPGTG 10
++L+G PG G
Sbjct: 40 VVLHGAPGVG 49


>sp|RFCL_HALLT|REPLICATION factor C large subunit|Halorubrum lacusprofundi (strain ATCC

Query: 1 ILLYGPPGTG 10
++L+G PG G
Sbjct: 40 VVLHGSPGVG 49


>sp|Y1830_SULTO|UPF0273 protein STK_18300|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ILLYGPPGTG 10
+L+ G PGTG
Sbjct: 27 VLISGGPGTG 36


>sp|CDC64_HALSA|ORC1-TYPE DNA replication protein 4|Halobacterium salinarum (strain ATCC

Query: 1 ILLYGPPGTG 10
+++YG GTG
Sbjct: 65 VMIYGKTGTG 74


>sp|CDC62_HALSA|ORC1-TYPE DNA replication protein 2|Halobacterium salinarum (strain ATCC

Query: 1 ILLYGPPGTG 10
+++YG GTG
Sbjct: 65 VMIYGKTGTG 74


>sp|Y1505_AERPE|UPF0273 protein APE_1505.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 ILLYGPPGTG 10
+LL G PGTG
Sbjct: 26 VLLSGGPGTG 35


>sp|RFCS_HALSA|REPLICATION factor C small subunit|Halobacterium salinarum (strain ATCC

Query: 1 ILLYGPPGTG 10
+L GP GTG
Sbjct: 46 LLFAGPAGTG 55


>sp|RFCS_HALS3|REPLICATION factor C small subunit|Halobacterium salinarum (strain ATCC 29341

Query: 1 ILLYGPPGTG 10
+L GP GTG
Sbjct: 46 LLFAGPAGTG 55


>sp|CDC6_DESA1|ORC1-TYPE DNA replication protein|Desulfurococcus amylolyticus (strain DSM

Query: 1 ILLYGPPGTG 10
+L+YG GTG
Sbjct: 60 VLIYGLTGTG 69


>sp|RNZ_METTH|RIBONUCLEASE Z|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 LYGPPG 8
+YGPPG
Sbjct: 88 IYGPPG 93


>sp|CDC61_ARCFU|ORC1-TYPE DNA replication protein 1|Archaeoglobus fulgidus (strain ATCC

Query: 1 ILLYGPPGTG 10
I +YG GTG
Sbjct: 55 IFIYGKTGTG 64


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LLYGPPGTG 10
+L GP GTG
Sbjct: 583 ILTGPAGTG 591


>sp|PGK2_PYRHO|2-PHOSPHOGLYCERATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ILLYGPPGTG 10
ILL GP G G
Sbjct: 93 ILLGGPTGVG 102


>sp|PGK2_PYRFU|2-PHOSPHOGLYCERATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ILLYGPPGTG 10
ILL GP G G
Sbjct: 93 ILLGGPTGVG 102


>sp|PGK2_PYRAB|2-PHOSPHOGLYCERATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 ILLYGPPGTG 10
ILL GP G G
Sbjct: 93 ILLGGPTGVG 102


>sp|TRMY_METM5|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 2 LLYGPP 7
+LYGPP
Sbjct: 55 VLYGPP 60




50|Sequence|246|255|PPGTGKTLIA

>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 PPGTGKTLIA 10
PPGTGKTL+A
Sbjct: 221 PPGTGKTLLA 230


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 PPGTGKTLIA 10
PPGTGKTL+A
Sbjct: 190 PPGTGKTLMA 199


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PPGTGKTLIA 10
PPGTGKTL+A
Sbjct: 195 PPGTGKTLLA 204


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PPGTGKTLIA 10
PPGTGKTL+A
Sbjct: 195 PPGTGKTLLA 204


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PPGTGKTLIA 10
PPGTGKTL+A
Sbjct: 190 PPGTGKTLLA 199


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 PPGTGKTLIA 10
PPGTGKTL+A
Sbjct: 190 PPGTGKTLLA 199


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 PPGTGKTLIA 10
PPGTGKTL+A
Sbjct: 190 PPGTGKTLLA 199


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 1 PPGTGKTLIA 10
PPGTGKTL+A
Sbjct: 190 PPGTGKTLLA 199


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 1 PPGTGKTLIA 10
PPGTGKT++A
Sbjct: 194 PPGTGKTMLA 203


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 1 PPGTGKTLIA 10
PPGTGKT++A
Sbjct: 192 PPGTGKTMLA 201


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PPGTGKTLIA 10
PPGTGKTL+A
Sbjct: 212 PPGTGKTLLA 221


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PPGTGKTLIA 10
PPGTGKTLIA
Sbjct: 232 PPGTGKTLIA 241


Query: 1 PPGTGKTLIA 10
PPG GKTL+A
Sbjct: 509 PPGVGKTLLA 518


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PPGTGKTLIA 10
PPGTGKTL+A
Sbjct: 193 PPGTGKTLLA 202


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PPGTGKTLIA 10
PPGTGKTL+A
Sbjct: 190 PPGTGKTLLA 199


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PPGTGKTLIA 10
PPGTGKTL+A
Sbjct: 195 PPGTGKTLLA 204


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 1 PPGTGKTLIA 10
PPGTGKTL+A
Sbjct: 220 PPGTGKTLLA 229


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PPGTGKTLIA 10
PPGTGKTL+A
Sbjct: 176 PPGTGKTLLA 185


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PPGTGKTLIA 10
PPGTGKTL+A
Sbjct: 162 PPGTGKTLMA 171


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 PPGTGKTLIA 10
PPGTGKT++A
Sbjct: 194 PPGTGKTMLA 203


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PPGTGKTLIA 10
PPGTGKTLIA
Sbjct: 224 PPGTGKTLIA 233


Query: 1 PPGTGKTLIA 10
PPGTGKTL+A
Sbjct: 497 PPGTGKTLLA 506


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PPGTGKTLIA 10
PPGTGKTL+A
Sbjct: 183 PPGTGKTLLA 192


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PPGTGKTLIA 10
PPGTGKTL+A
Sbjct: 201 PPGTGKTLLA 210


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 PPGTGKTLIA 10
PPGTGKT++A
Sbjct: 176 PPGTGKTMLA 185


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PPGTGKTLIA 10
PPGTGKT++A
Sbjct: 176 PPGTGKTMLA 185


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PPGTGKTLIA 10
PPGTGKT++A
Sbjct: 176 PPGTGKTMLA 185


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 PPGTGKTLIA 10
PPGTGKT++A
Sbjct: 176 PPGTGKTMLA 185


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PPGTGKTLIA 10
PPGTGKT++A
Sbjct: 176 PPGTGKTMLA 185


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 PPGTGKTLIA 10
PPGTGKT++A
Sbjct: 176 PPGTGKTMLA 185


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 PPGTGKTLIA 10
PPGTGKTL+A
Sbjct: 221 PPGTGKTLLA 230


Query: 1 PPGTGKTLIA 10
PPGTGKTL+A
Sbjct: 494 PPGTGKTLLA 503


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PPGTGKTLIA 10
PPGTGKT++A
Sbjct: 176 PPGTGKTMLA 185


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PPGTGKTLIA 10
PPGTGKTL+A
Sbjct: 254 PPGTGKTLLA 263


Query: 1 PPGTGKTLIA 10
PPGTGKT++A
Sbjct: 529 PPGTGKTMLA 538


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PPGTGKTLIA 10
PPG GKT+IA
Sbjct: 145 PPGCGKTMIA 154


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PPGTGKTLIA 10
PPGTGKTL+A
Sbjct: 181 PPGTGKTLLA 190


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 PPGTGKTLIA 10
PPGTGKTL+A
Sbjct: 231 PPGTGKTLLA 240


Query: 1 PPGTGKTLIA 10
PPGTGKTL+A
Sbjct: 504 PPGTGKTLMA 513


>sp|RFCS_PYRCJ|REPLICATION factor C small subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PPGTGKTLIA 10
PPGTGKT +A
Sbjct: 45 PPGTGKTTMA 54


>sp|RFCS2_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PPGTGKTLIA 10
PPGTGKT +A
Sbjct: 45 PPGTGKTTMA 54


>sp|RFCS2_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PPGTGKTLIA 10
PPGTGKT +A
Sbjct: 45 PPGTGKTTMA 54


>sp|RFCS1_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PPGTGKTLIA 10
PPGTGKT +A
Sbjct: 45 PPGTGKTTMA 54


>sp|RFCS1_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PPGTGKTLIA 10
PPGTGKT +A
Sbjct: 45 PPGTGKTTMA 54


>sp|RFCS1_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PPGTGKTLIA 10
PPGTGKT +A
Sbjct: 45 PPGTGKTTMA 54


>sp|RFCL_METTH|REPLICATION factor C large subunit|Methanothermobacter thermautotrophicus

Query: 1 PPGTGKTLIA 10
PPGTGKT +A
Sbjct: 46 PPGTGKTTLA 55


>sp|RFCS2_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PPGTGKTLIA 10
PPGTGKT +A
Sbjct: 45 PPGTGKTTMA 54


>sp|RFCS_ARCFU|REPLICATION factor C small subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PPGTGKTLIA 10
PPGTGKT A
Sbjct: 46 PPGTGKTATA 55


>sp|RFCL_SACS2|REPLICATION factor C large subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 PPGTGKTLIA 10
PPG GKT++A
Sbjct: 48 PPGVGKTVLA 57


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 PPGTGKTLIA 10
PPG GKTL+A
Sbjct: 179 PPGCGKTLMA 188


>sp|RFCL_METST|REPLICATION factor C large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 PPGTGKTLIA 10
PPG GKT IA
Sbjct: 46 PPGIGKTTIA 55


>sp|RFCS_THEPD|REPLICATION factor C small subunit|Thermofilum pendens (strain DSM 2475

Query: 1 PPGTGKTLIA 10
PPGTGKT A
Sbjct: 45 PPGTGKTTAA 54


>sp|RFCS_SULTO|REPLICATION factor C small subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PPGTGKTLIA 10
PPGTGKT A
Sbjct: 48 PPGTGKTTAA 57


>sp|RFCS_SULAC|REPLICATION factor C small subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 PPGTGKTLIA 10
PPGTGKT A
Sbjct: 46 PPGTGKTTAA 55


>sp|RFCS_STAMF|REPLICATION factor C small subunit|Staphylothermus marinus (strain ATCC 43588

Query: 1 PPGTGKTLIA 10
PPGTGKT A
Sbjct: 52 PPGTGKTTAA 61


>sp|RFCS_SACS2|REPLICATION factor C small subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 PPGTGKTLIA 10
PPGTGKT A
Sbjct: 49 PPGTGKTTAA 58


>sp|RFCS_NANEQ|REPLICATION factor C small subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PPGTGKTLIA 10
PPGTGKT A
Sbjct: 43 PPGTGKTTAA 52


>sp|RFCS_METKA|REPLICATION factor C small subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 PPGTGKTLIA 10
PPGTGKT A
Sbjct: 52 PPGTGKTTAA 61


>sp|RFCS_AERPE|REPLICATION factor C small subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 PPGTGKTLIA 10
PPGTGKT A
Sbjct: 48 PPGTGKTTAA 57


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PPGTGKTLIA 10
PPG GKTL+A
Sbjct: 179 PPGCGKTLMA 188


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 1 PPGTGKTLIA 10
PPG GKTL+A
Sbjct: 181 PPGCGKTLMA 190


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PPGTGKTLIA 10
PPG GKTL+A
Sbjct: 180 PPGCGKTLMA 189


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PPGTGKTLIA 10
PPG GKTL+A
Sbjct: 182 PPGCGKTLMA 191


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PPGTGKTLIA 10
PPG GKTL+A
Sbjct: 180 PPGCGKTLMA 189


>sp|KCY_SACS2|CYTIDYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PPGTGKTLIA 10
PPG+GKT +A
Sbjct: 8 PPGSGKTSVA 17


>sp|KCY_SACI7|CYTIDYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 PPGTGKTLIA 10
PPG+GKT +A
Sbjct: 8 PPGSGKTSVA 17


>sp|KCY_SACI6|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PPGTGKTLIA 10
PPG+GKT +A
Sbjct: 8 PPGSGKTSVA 17


>sp|KCY_SACI4|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PPGTGKTLIA 10
PPG+GKT +A
Sbjct: 8 PPGSGKTSVA 17


>sp|KCY_SACI3|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 PPGTGKTLIA 10
PPG+GKT +A
Sbjct: 8 PPGSGKTSVA 17


>sp|KCY_SACI2|CYTIDYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PPGTGKTLIA 10
PPG+GKT +A
Sbjct: 8 PPGSGKTSVA 17


>sp|KCY_SACI1|CYTIDYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 PPGTGKTLIA 10
PPG+GKT +A
Sbjct: 8 PPGSGKTSVA 17


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PGTGKTLIA 10
PGTGKTL+A
Sbjct: 202 PGTGKTLLA 210


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 1 PPGTGKTLIA 10
P G+GKTLIA
Sbjct: 54 PTGSGKTLIA 63


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PPGTGKTLIA 10
P G+GKTLIA
Sbjct: 47 PTGSGKTLIA 56


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 1 PPGTGKTLIA 10
P G+GKTLIA
Sbjct: 54 PTGSGKTLIA 63


>sp|PAN2_METTM|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter marburgensis (strain ATCC

Query: 2 PGTGKTLIA 10
PGTGKT++A
Sbjct: 166 PGTGKTMLA 174


>sp|PAN2_METTH|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 PGTGKTLIA 10
PGTGKT++A
Sbjct: 166 PGTGKTMLA 174


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii (strain

Query: 1 PPGTGKT 7
PPGTGKT
Sbjct: 208 PPGTGKT 214


>sp|RFCL_NANEQ|REPLICATION factor C large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PPGTGKT 7
PPGTGKT
Sbjct: 76 PPGTGKT 82


>sp|CDC6C_HALMA|ORC1-TYPE DNA replication protein 3|Haloarcula marismortui (strain ATCC

Query: 1 PPGTGKT 7
PPGTGKT
Sbjct: 63 PPGTGKT 69


>sp|CDC66_HALSA|ORC1-TYPE DNA replication protein 6|Halobacterium salinarum (strain ATCC

Query: 1 PPGTGKT 7
PPGTGKT
Sbjct: 63 PPGTGKT 69


>sp|CDC62_METMA|ORC1-TYPE DNA replication protein 2|Methanosarcina mazei (strain ATCC

Query: 1 PPGTGKT 7
PPGTGKT
Sbjct: 60 PPGTGKT 66


>sp|CDC62_METAC|ORC1-TYPE DNA replication protein 2|Methanosarcina acetivorans (strain ATCC

Query: 1 PPGTGKT 7
PPGTGKT
Sbjct: 60 PPGTGKT 66


>sp|RFCL_METVS|REPLICATION factor C large subunit|Methanococcus vannielii (strain ATCC 35089

Query: 1 PPGTGKTLIA 10
PPG+GKT +A
Sbjct: 47 PPGSGKTTMA 56


>sp|RFCL_METKA|REPLICATION factor C large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 PPGTGKTLIA 10
PPGTGKT A
Sbjct: 49 PPGTGKTSAA 58


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PGTGKTLIA 10
PGTGKTL+A
Sbjct: 202 PGTGKTLLA 210


>sp|RFCL_SULTO|REPLICATION factor C large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PPGTGKTLIA 10
PPG GKT +A
Sbjct: 49 PPGVGKTTLA 58


>sp|RFCL_SULAC|REPLICATION factor C large subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 PPGTGKTLIA 10
PPG GKT +A
Sbjct: 49 PPGVGKTTLA 58


>sp|RFCL_SACI7|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 PPGTGKTLIA 10
PPG GKT +A
Sbjct: 48 PPGVGKTTLA 57


>sp|RFCL_SACI6|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PPGTGKTLIA 10
PPG GKT +A
Sbjct: 48 PPGVGKTTLA 57


>sp|RFCL_SACI4|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PPGTGKTLIA 10
PPG GKT +A
Sbjct: 48 PPGVGKTTLA 57


>sp|RFCL_SACI3|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.27)

Query: 1 PPGTGKTLIA 10
PPG GKT +A
Sbjct: 48 PPGVGKTTLA 57


>sp|RFCL_SACI2|REPLICATION factor C large subunit|Saccharolobus islandicus (strain L.S.2.15

Query: 1 PPGTGKTLIA 10
PPG GKT +A
Sbjct: 48 PPGVGKTTLA 57


>sp|RFCL_SACI1|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 PPGTGKTLIA 10
PPG GKT +A
Sbjct: 48 PPGVGKTTLA 57


>sp|RADB_METST|DNA repair and recombination protein|Methanosphaera stadtmanae

Query: 1 PPGTGKTLIA 10
PPG+GKT IA
Sbjct: 38 PPGSGKTNIA 47


>sp|LONH_METTH|PUTATIVE lon protease homolog|Methanothermobacter thermautotrophicus

Query: 1 PPGTGKTLIA 10
PPG GK+L+A
Sbjct: 54 PPGIGKSLLA 63


>sp|PSTK_METKA|L-SERYL-TRNA(SEC) kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 PPGTGKTLIA 10
PPG+GKT A
Sbjct: 9 PPGSGKTCFA 18


>sp|LONH_THEVO|PUTATIVE lon protease homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PPGTGKTLIA 10
PPG GK++IA
Sbjct: 53 PPGVGKSMIA 62


>sp|RFCL_METS3|REPLICATION factor C large subunit|Methanobrevibacter smithii (strain ATCC

Query: 1 PPGTGKTLIA 10
PPG GKT +A
Sbjct: 46 PPGIGKTTLA 55


>sp|RAD25_HALSA|PUTATIVE DNA 3'-5' helicase Rad25|Halobacterium salinarum (strain ATCC

Query: 1 PPGTGKTLIA 10
PPG+GKT+ A
Sbjct: 267 PPGSGKTVAA 276


>sp|KCY_SULTO|CYTIDYLATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PPGTGKTLIA 10
PPG+GK+ +A
Sbjct: 8 PPGSGKSTVA 17


>sp|KCY_IGNH4|CYTIDYLATE kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PPGTGKTLIA 10
PPG+GK+ +A
Sbjct: 9 PPGSGKSTVA 18


>sp|KCY_HALSA|CYTIDYLATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PPGTGKTLIA 10
PPG+GK+ +A
Sbjct: 8 PPGSGKSTVA 17


>sp|KCY_HALS3|CYTIDYLATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 PPGTGKTLIA 10
PPG+GK+ +A
Sbjct: 8 PPGSGKSTVA 17


>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PPGTGKTLIA 10
PPG GK++IA
Sbjct: 53 PPGVGKSMIA 62


>sp|RFCL_METM7|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 PPGTGKTLIA 10
PPG+GKT +A
Sbjct: 47 PPGSGKTTLA 56


>sp|RFCL_THEPD|REPLICATION factor C large subunit|Thermofilum pendens (strain DSM 2475

Query: 1 PPGTGKTLI 9
PPG+GKT I
Sbjct: 55 PPGSGKTSI 63


>sp|RFCL_METM6|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 PPGTGKTLIA 10
PPG+GKT +A
Sbjct: 47 PPGSGKTTLA 56


>sp|RFCL_ARCFU|REPLICATION factor C large subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PPGTGKTLIA 10
PPG GKT +A
Sbjct: 44 PPGVGKTSLA 53


>sp|CDC6_CENSY|ORC1-TYPE DNA replication protein|Cenarchaeum symbiosum (strain A)

Query: 2 PGTGKTLI 9
PGTGKTL+
Sbjct: 76 PGTGKTLV 83


>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PPGTGKT 7
PPGTGKT
Sbjct: 389 PPGTGKT 395


>sp|KCY_SULAC|CYTIDYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PPGTGKTLIA 10
PPG+GK+ +A
Sbjct: 8 PPGSGKSSVA 17


>sp|RFCL_METJA|REPLICATION factor C large subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PPGTGKTLIA 10
PPG GKT +A
Sbjct: 47 PPGCGKTTLA 56


>sp|RFCL_PYRIL|REPLICATION factor C large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PPGTGKTLI 9
PPG GKT I
Sbjct: 64 PPGIGKTTI 72


>sp|CDC6Z_METTF|ORC1-TYPE DNA replication protein|Methanothermobacter thermautotrophicus

Query: 1 PPGTGKTL 8
PPG+GKT+
Sbjct: 55 PPGSGKTV 62


>sp|CDC6V_METTF|ORC1-TYPE DNA replication protein|Methanothermobacter thermautotrophicus

Query: 1 PPGTGKTL 8
PPG+GKT+
Sbjct: 55 PPGSGKTV 62


>sp|LONB_HALSA|ARCHAEAL Lon protease|Halobacterium salinarum (strain ATCC 700922

Query: 2 PGTGKTLIA 10
PGTGK+L+A
Sbjct: 119 PGTGKSLLA 127


>sp|RADB_METTH|DNA repair and recombination protein|Methanothermobacter

Query: 1 PPGTGKTLI 9
PPG+GKT I
Sbjct: 38 PPGSGKTNI 46


>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 1 PPGTGKTL 8
PPG+GKT+
Sbjct: 282 PPGSGKTV 289


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 1 PPGTGKT 7
PPGTGKT
Sbjct: 364 PPGTGKT 370


>sp|RFCL_PYRHO|REPLICATION factor C large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PPGTGKT 7
PPG+GKT
Sbjct: 51 PPGSGKT 57


>sp|RFCL_PYRFU|REPLICATION factor C large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PPGTGKT 7
PPG+GKT
Sbjct: 51 PPGSGKT 57


>sp|RFCL_PYRAB|REPLICATION factor C large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 PPGTGKT 7
PPG+GKT
Sbjct: 51 PPGSGKT 57


>sp|KCY_DESA1|CYTIDYLATE kinase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 PPGTGKT 7
PPG+GKT
Sbjct: 9 PPGSGKT 15


>sp|RFCS_METAR|REPLICATION factor C small subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 PPGTGKTLIA 10
PPG GKT A
Sbjct: 46 PPGVGKTACA 55


>sp|CDC6N_HALMA|ORC1-TYPE DNA replication protein 14|Haloarcula marismortui (strain ATCC

Query: 1 PPGTGKTLI 9
P GTGK+LI
Sbjct: 59 PAGTGKSLI 67


>sp|CDC65_HALSA|ORC1-TYPE DNA replication protein 5|Halobacterium salinarum (strain ATCC

Query: 1 PPGTGKTLI 9
P GTGK+LI
Sbjct: 59 PAGTGKSLI 67


>sp|KCY_PYRNV|CYTIDYLATE kinase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PGTGKTLIA 10
PG+GKT IA
Sbjct: 10 PGSGKTTIA 18


>sp|KCY_PYRAR|CYTIDYLATE kinase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PGTGKTLIA 10
PG+GKT IA
Sbjct: 10 PGSGKTTIA 18


>sp|KCY_PYRAE|CYTIDYLATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PGTGKTLIA 10
PG+GKT IA
Sbjct: 10 PGSGKTTIA 18


>sp|RFCL_METMP|REPLICATION factor C large subunit|Methanococcus maripaludis (strain DSM

Query: 1 PPGTGKTLIA 10
PPG+GKT +A
Sbjct: 47 PPGSGKTTLA 56


>sp|RFCL_PYRNV|REPLICATION factor C large subunit|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PPGTGKTLI 9
PPG GKT +
Sbjct: 64 PPGIGKTTV 72


>sp|RADB_METMP|DNA repair and recombination protein|Methanococcus maripaludis

Query: 1 PPGTGKTLI 9
PPG GKT I
Sbjct: 21 PPGVGKTNI 29


>sp|RADB_METMI|DNA repair and recombination protein|Methanococcus maripaludis

Query: 1 PPGTGKTLI 9
PPG GKT I
Sbjct: 21 PPGVGKTNI 29


>sp|RADB_METM7|DNA repair and recombination protein|Methanococcus maripaludis

Query: 1 PPGTGKTLI 9
PPG GKT I
Sbjct: 21 PPGVGKTNI 29


>sp|RADB_METM5|DNA repair and recombination protein|Methanococcus maripaludis

Query: 1 PPGTGKTLI 9
PPG GKT I
Sbjct: 21 PPGVGKTNI 29


>sp|RADB_METJA|DNA repair and recombination protein|Methanocaldococcus jannaschii

Query: 1 PPGTGKTLI 9
PPG GKT I
Sbjct: 21 PPGVGKTNI 29


>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 PPGTGKTLIA 10
PPG+GKT +A
Sbjct: 47 PPGSGKTTLA 56


>sp|RFCL_PYRAR|REPLICATION factor C large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PPGTGKTLI 9
PPG GKT +
Sbjct: 64 PPGVGKTTL 72


>sp|RFCL_PYRAE|REPLICATION factor C large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PPGTGKTLI 9
PPG GKT +
Sbjct: 64 PPGVGKTTL 72


>sp|NTPTH_CALMQ|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 PPGTGKTLI 9
PPG GKT +
Sbjct: 10 PPGVGKTTL 18


>sp|CDC69_HALSA|ORC1-TYPE DNA replication protein 9|Halobacterium salinarum (strain ATCC

Query: 1 PPGTGKTLIA 10
P GTGKT I+
Sbjct: 60 PSGTGKTCIS 69


>sp|CDC6M_HALMA|ORC1-TYPE DNA replication protein 13|Haloarcula marismortui (strain ATCC

Query: 3 GTGKTLIA 10
GTGKTL+A
Sbjct: 79 GTGKTLVA 86


>sp|RFCL_METTP|REPLICATION factor C large subunit|Methanothrix thermoacetophila (strain DSM

Query: 1 PPGTGKTLIA 10
PPG GKT A
Sbjct: 48 PPGVGKTSAA 57


>sp|RFCS_METMA|REPLICATION factor C small subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PPGTGKTLIA 10
PPG GKT A
Sbjct: 54 PPGVGKTASA 63


>sp|RFCS_METBF|REPLICATION factor C small subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 PPGTGKTLIA 10
PPG GKT A
Sbjct: 50 PPGVGKTASA 59


>sp|RFCS_METAC|REPLICATION factor C small subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 PPGTGKTLIA 10
PPG GKT A
Sbjct: 54 PPGVGKTASA 63


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 1 PPGTGKTLIA 10
P G+GKTL A
Sbjct: 55 PTGSGKTLTA 64


>sp|RFCL_THEKO|REPLICATION factor C large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 PPGTGKT 7
PPG GKT
Sbjct: 51 PPGVGKT 57


>sp|RADB_METS3|DNA repair and recombination protein|Methanobrevibacter smithii

Query: 1 PPGTGKTLIA 10
PPG+GK+ I+
Sbjct: 38 PPGSGKSNIS 47


>sp|RFCL_PYRCJ|REPLICATION factor C large subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PPGTGKTLI 9
PPG GKT +
Sbjct: 64 PPGIGKTTL 72


>sp|KCY_AERPE|CYTIDYLATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PPGTGKTLIA 10
PPG+GK+ A
Sbjct: 5 PPGSGKSTYA 14


>sp|XPD_THEAC|ATP-DEPENDENT DNA helicase XPD|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PPGTGKTLIA 10
P G+GKT++A
Sbjct: 12 PTGSGKTIMA 21


>sp|RFCL_META3|REPLICATION factor C large subunit|Methanococcus aeolicus (strain ATCC

Query: 1 PPGTGKTLI 9
PPG GKT +
Sbjct: 46 PPGCGKTTL 54


>sp|RFCL_AERPE|REPLICATION factor C large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 PPGTGKT 7
PPG GKT
Sbjct: 57 PPGVGKT 63


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PPGTGKTLIA 10
P G+GKTL A
Sbjct: 55 PTGSGKTLAA 64


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PPGTGKTLIA 10
P G+GKTL A
Sbjct: 53 PTGSGKTLAA 62


>sp|KAD6_PYRAB|PUTATIVE adenylate kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 PGTGKTLIA 10
PG GKT IA
Sbjct: 9 PGVGKTTIA 17


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PPGTGKTLIA 10
P +GKTLIA
Sbjct: 50 PTASGKTLIA 59


>sp|HELS_PYRFU|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PPGTGKTLIA 10
P +GKTLIA
Sbjct: 47 PTASGKTLIA 56


>sp|HELS_PYRAB|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus abyssi (strain GE5 /

Query: 1 PPGTGKTLIA 10
P +GKTLIA
Sbjct: 47 PTASGKTLIA 56


>sp|Y1629_PYRAE|UPF0200 protein PAE1629|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PGTGKTLIA 10
PG+GKT +A
Sbjct: 11 PGSGKTTVA 19


>sp|KCY_PYRIL|CYTIDYLATE kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PGTGKTLIA 10
PG+GKT +A
Sbjct: 10 PGSGKTTVA 18


>sp|KCY_PYRCJ|CYTIDYLATE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PGTGKTLIA 10
PG+GKT +A
Sbjct: 10 PGSGKTTVA 18


>sp|HELS_PYRHO|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PPGTGKTLIA 10
P +GKTLIA
Sbjct: 47 PTASGKTLIA 56


>sp|RFCL_PICTO|REPLICATION factor C large subunit|Picrophilus torridus (strain ATCC 700027

Query: 2 PGTGKTLIA 10
PGTGKT A
Sbjct: 48 PGTGKTTTA 56


>sp|RFCL_IGNH4|REPLICATION factor C large subunit|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PPGTGKT 7
PPG GKT
Sbjct: 51 PPGVGKT 57


>sp|LONB_ARCFU|ARCHAEAL Lon protease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PGTGKTLIA 10
PGTGK+++A
Sbjct: 56 PGTGKSMLA 64


>sp|CYSC_AERPE|PROBABLE adenylyl-sulfate kinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PGTGKTLIA 10
PG+GKT IA
Sbjct: 19 PGSGKTTIA 27


>sp|LONB_THEVO|ARCHAEAL Lon protease|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PGTGKTLIA 10
PGTGK+++A
Sbjct: 59 PGTGKSMLA 67


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PPGTGKT 7
PPG GKT
Sbjct: 107 PPGLGKT 113


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PPGTGKT 7
PPG GKT
Sbjct: 110 PPGLGKT 116


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PPGTGKT 7
PPG GKT
Sbjct: 111 PPGLGKT 117


>sp|KCY_HALWD|CYTIDYLATE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PPGTGKTLIA 10
PPG GK+ A
Sbjct: 8 PPGAGKSTTA 17


>sp|CDC62_ARCFU|ORC1-TYPE DNA replication protein 2|Archaeoglobus fulgidus (strain ATCC

Query: 1 PPGTGKT 7
PP TGKT
Sbjct: 70 PPSTGKT 76


>sp|NTPTH_IGNH4|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PPGTGKTLIA 10
PPG GK+ +A
Sbjct: 9 PPGAGKSTLA 18


>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PGTGKTLIA 10
PGTGK+++A
Sbjct: 59 PGTGKSMLA 67


>sp|KCY_STAMF|CYTIDYLATE kinase|Staphylothermus marinus (strain ATCC 43588

Query: 1 PPGTGKT 7
PPG GKT
Sbjct: 9 PPGGGKT 15


>sp|KAD6_METMA|PUTATIVE adenylate kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PGTGKTLIA 10
PGTGKT ++
Sbjct: 9 PGTGKTSVS 17


>sp|KAD6_METBF|PUTATIVE adenylate kinase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PGTGKTLIA 10
PGTGKT ++
Sbjct: 9 PGTGKTSVS 17


>sp|KAD6_METAC|PUTATIVE adenylate kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PGTGKTLIA 10
PGTGKT ++
Sbjct: 9 PGTGKTSVS 17


>sp|CDC61_HALSA|ORC1-TYPE DNA replication protein 1|Halobacterium salinarum (strain ATCC

Query: 1 PPGTGKTLIA 10
P G GKT IA
Sbjct: 48 PSGVGKTCIA 57


>sp|RFCS_THEKO|REPLICATION factor C small subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 PPGTGKTL 8
PPG GK L
Sbjct: 54 PPGVGKCL 61


>sp|RFCS_PYRHO|REPLICATION factor C small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PPGTGKTL 8
PPG GK L
Sbjct: 56 PPGVGKCL 63


>sp|RFCS_PYRFU|REPLICATION factor C small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PPGTGKTL 8
PPG GK L
Sbjct: 54 PPGVGKCL 61


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 PPGTGKTL 8
PPG GK L
Sbjct: 56 PPGVGKCL 63


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PPGTGKTL 8
PPG GK L
Sbjct: 48 PPGVGKCL 55


>sp|LHRC_METJA|ATP-DEPENDENT helicase Lhr-Core|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PPGTGKTLIA 10
P G+GKTL A
Sbjct: 57 PTGSGKTLSA 66


>sp|LHRC2_THEBM|ATP-DEPENDENT helicase Lhr-Core protein 2|Thermococcus barophilus (strain DSM

Query: 1 PPGTGKTLIA 10
P G+GKTL A
Sbjct: 55 PTGSGKTLSA 64


>sp|KCY_HALLT|CYTIDYLATE kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PPGTGKT 7
PPG+GK+
Sbjct: 8 PPGSGKS 14


>sp|KAD_THESM|ADENYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 PPGTGKT 7
PPG+GK+
Sbjct: 8 PPGSGKS 14


>sp|KAD_THEON|ADENYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 PPGTGKT 7
PPG+GK+
Sbjct: 8 PPGSGKS 14


>sp|KAD_THEKO|ADENYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PPGTGKT 7
PPG+GK+
Sbjct: 8 PPGSGKS 14


>sp|KAD6_THEVO|PUTATIVE adenylate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PPGTGKTLI 9
PPG GK+ +
Sbjct: 10 PPGAGKSTV 18


>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii (strain

Query: 1 PPGTGKT 7
PPG+GK+
Sbjct: 292 PPGSGKS 298


>sp|KCY_METAR|CYTIDYLATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 2 PGTGKTLIA 10
PG+GKT +A
Sbjct: 9 PGSGKTSVA 17


>sp|KAD6_ARCFU|PUTATIVE adenylate kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PGTGKTLIA 10
PGTGK+ +A
Sbjct: 9 PGTGKSSVA 17


>sp|RFCS_HALMA|REPLICATION factor C small subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 PPGTGKTLIA 10
P GTGKT A
Sbjct: 55 PAGTGKTTCA 64


>sp|HELS_THEVO|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PPGTGKTLIA 10
P GKTLIA
Sbjct: 45 PTAAGKTLIA 54


>sp|HELS_THEAC|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PPGTGKTLIA 10
P GKTLIA
Sbjct: 45 PTAAGKTLIA 54


>sp|KAD6_PYRHO|PUTATIVE adenylate kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PGTGKTLIA 10
PG GKT +A
Sbjct: 9 PGVGKTTVA 17


>sp|HELS_HALMA|ATP-DEPENDENT DNA helicase Hel308|Haloarcula marismortui (strain ATCC 43049

Query: 1 PPGTGKTLIA 10
P +GKTLIA
Sbjct: 48 PTASGKTLIA 57


>sp|Y258_PYRAB|UPF0273 protein PYRAB02580|Pyrococcus abyssi (strain GE5 /

Query: 2 PGTGKTLIA 10
PGTGKT+ +
Sbjct: 32 PGTGKTIFS 40


>sp|KADL_METTH|ADENYLATE kinase homolog MTH_1663|Methanothermobacter thermautotrophicus

Query: 2 PGTGKTLI 9
PGTGKT +
Sbjct: 14 PGTGKTTV 21


>sp|KAD6_PYRFU|PUTATIVE adenylate kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PGTGKTLIA 10
PG GKT +A
Sbjct: 9 PGVGKTTVA 17


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PPGTGKTLI 9
P GTGKT +
Sbjct: 587 PAGTGKTTV 595


>sp|HELS_AERPE|ATP-DEPENDENT DNA helicase Hel308|Aeropyrum pernix (strain ATCC 700893

Query: 1 PPGTGKTLIA 10
P G+GKT IA
Sbjct: 51 PTGSGKTFIA 60


>sp|XPD_SULAC|ATP-DEPENDENT DNA helicase XPD|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PPGTGKTLIA 10
P G+GKTL +
Sbjct: 30 PTGSGKTLFS 39


>sp|KAD_THEGJ|ADENYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PPGTGKT 7
PPG+GK+
Sbjct: 8 PPGSGKS 14


>sp|GVPD1_HALSA|PROTEIN GvpD1|Halobacterium salinarum (strain ATCC 700922

Query: 2 PGTGKTL 8
PGTGKTL
Sbjct: 41 PGTGKTL 47


>sp|KAD_PYRFU|ADENYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PPGTGKT 7
PPG+GK+
Sbjct: 8 PPGSGKS 14


>sp|Y039_METKA|UPF0273 protein MK0039|Methanopyrus kandleri (strain AV19 /

Query: 2 PGTGKTLIA 10
PGTGKT+ +
Sbjct: 33 PGTGKTIFS 41


>sp|RUVB_METHJ|HOLLIDAY junction branch migration complex|Methanospirillum hungatei JF-1

Query: 1 PPGTGKTLIA 10
PPG GKT +A
Sbjct: 60 PPGLGKTTLA 69


>sp|RUVB_METB6|HOLLIDAY junction branch migration complex|Methanoregula boonei (strain

Query: 1 PPGTGKTLIA 10
PPG GKT +A
Sbjct: 60 PPGLGKTTLA 69


>sp|RFCS_PICTO|REPLICATION factor C small subunit|Picrophilus torridus (strain ATCC 700027

Query: 1 PPGTGKTLIA 10
P GTGKT A
Sbjct: 44 PAGTGKTSTA 53


>sp|Y284_PYRHO|UPF0273 protein PH0284|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PGTGKTLIA 10
PGTGKT+ +
Sbjct: 32 PGTGKTIFS 40


>sp|KAD_PYRAB|ADENYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 PPGTGKT 7
PPG+GK+
Sbjct: 8 PPGSGKS 14


>sp|HELS_NATPD|ATP-DEPENDENT DNA helicase Hel308|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PPGTGKTLIA 10
P +GKTL+A
Sbjct: 48 PTASGKTLVA 57


>sp|KAD6_THEAC|PUTATIVE adenylate kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PGTGKTLI 9
PGTGK+ I
Sbjct: 8 PGTGKSTI 15


>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 1 PPGTGKTLIA 10
P +GKTL+A
Sbjct: 47 PTASGKTLLA 56


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 1 PPGTGKTLIA 10
P +GKTLIA
Sbjct: 48 PTASGKTLIA 57


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 1 PPGTGKTLIA 10
P +GKTLIA
Sbjct: 48 PTASGKTLIA 57


>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 1 PPGTGKTLIA 10
P +GKTLIA
Sbjct: 47 PTASGKTLIA 56


>sp|Y1489_METJA|MCM-LIKE protein MJ1489|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PGTGKTLI 9
PG GKT+I
Sbjct: 331 PGIGKTVI 338


>sp|KAD_PYRHO|ADENYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PPGTGKT 7
PPG+GK+
Sbjct: 8 PPGSGKS 14


>sp|XPB_ARCFU|DNA 3'-5' translocase XPB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PPGTGKTLIA 10
P G+GKT +A
Sbjct: 96 PTGSGKTHVA 105


>sp|HELS_METAC|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PPGTGKTLIA 10
P +GKTL+A
Sbjct: 47 PTASGKTLLA 56


>sp|Y1662_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 PPGTGKTLI 9
P G GKT+I
Sbjct: 293 PSGVGKTVI 301


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PGTGKTLIA 10
PGTGK+++
Sbjct: 61 PGTGKSMLG 69


>sp|KADA_PYRAE|ADENYLATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PGTGKTLI 9
PG+GKT I
Sbjct: 9 PGSGKTTI 16


>sp|KAD6_THEKO|PUTATIVE adenylate kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PGTGKTLIA 10
PG GKT I+
Sbjct: 9 PGVGKTTIS 17


>sp|KAD6_METJA|PUTATIVE adenylate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PGTGKTLIA 10
PG GKT I+
Sbjct: 9 PGVGKTTIS 17


>sp|XPB1_SULTO|DNA 3'-5' helicase/translocase StoXPB1|Sulfurisphaera tokodaii (strain

Query: 1 PPGTGKTLIA 10
P G GKT+I
Sbjct: 181 PTGAGKTVIG 190


>sp|RFCS_HALSA|REPLICATION factor C small subunit|Halobacterium salinarum (strain ATCC

Query: 1 PPGTGKT 7
P GTGKT
Sbjct: 51 PAGTGKT 57


>sp|RFCS_HALS3|REPLICATION factor C small subunit|Halobacterium salinarum (strain ATCC 29341

Query: 1 PPGTGKT 7
P GTGKT
Sbjct: 51 PAGTGKT 57


>sp|NTPTH_PYRNV|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PGTGKTLIA 10
PG GKT +A
Sbjct: 17 PGVGKTTLA 25


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 2 PGTGKTLIA 10
PGTGK+++
Sbjct: 71 PGTGKSMLG 79


>sp|NTPTH_AERPE|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Aeropyrum pernix (strain ATCC 700893

Query: 1 PPGTGKT 7
PPG+GK+
Sbjct: 25 PPGSGKS 31


>sp|HELS_METBF|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina barkeri (strain Fusaro /

Query: 1 PPGTGKTLIA 10
P +GKTL+A
Sbjct: 47 PTASGKTLLA 56


>sp|HELS_METMA|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PPGTGKTLIA 10
P +GKTL+A
Sbjct: 47 PTASGKTLLA 56


>sp|Y1830_SULTO|UPF0273 protein STK_18300|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PGTGKTLIA 10
PGTGK+++
Sbjct: 33 PGTGKSILG 41


>sp|Y1753_AERPE|UPF0200 protein APE_1753.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 PGTGKTLIA 10
PG+GK+++A
Sbjct: 15 PGSGKSVVA 23


>sp|GVPD2_HALSA|PROTEIN GvpD2|Halobacterium salinarum (strain ATCC 700922

Query: 2 PGTGKTL 8
PGTGKTL
Sbjct: 41 PGTGKTL 47


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 PPGTGKT 7
P GTGKT
Sbjct: 179 PTGTGKT 185


>sp|GVPD_HALMT|PROTEIN GvpD|Haloferax mediterranei (strain ATCC 33500

Query: 2 PGTGKTL 8
PGTGKTL
Sbjct: 41 PGTGKTL 47


>sp|Y1861_SACS2|UPF0273 protein SSO1861|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PGTGKTLIA 10
PGTGK+++
Sbjct: 31 PGTGKSILG 39


>sp|NTPTH_PYRFU|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PGTGKTLIA 10
PG GKT +A
Sbjct: 12 PGVGKTTLA 20


>sp|XPB2_SULTO|DNA 3'-5' translocase XPB2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PPGTGKTLIA 10
P G GKT +A
Sbjct: 91 PTGAGKTQVA 100


>sp|GVPN2_HALSA|GAS vesicle ATPase GvpN2|Halobacterium salinarum (strain ATCC 700922

Query: 1 PPGTGKTLIA 10
P G GKT +A
Sbjct: 90 PTGCGKTAVA 99


>sp|RFCL_METMJ|REPLICATION factor C large subunit|Methanoculleus marisnigri (strain ATCC

Query: 2 PGTGKT 7
PGTGKT
Sbjct: 45 PGTGKT 50


>sp|HELS_METVS|ATP-DEPENDENT DNA helicase Hel308|Methanococcus vannielii (strain ATCC 35089

Query: 1 PPGTGKTLIA 10
P +GKTLI
Sbjct: 40 PTASGKTLIG 49


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PPGTGKTLIA 10
P +GKTLI
Sbjct: 40 PTASGKTLIG 49


>sp|NTPTH_SULTO|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PGTGKTLI 9
PG GKT I
Sbjct: 13 PGVGKTTI 20


>sp|KAD_HALMA|ADENYLATE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PPGTGK 6
PPG GK
Sbjct: 11 PPGAGK 16


>sp|HELS_ARCFU|ATP-DEPENDENT DNA helicase Hel308|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PPGTGKTLIA 10
P GKTL+A
Sbjct: 48 PTAAGKTLLA 57




51|Sequence|251|260|KTLIARAVAN

>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KTLIARAVAN 10
KTLIARAVAN
Sbjct: 237 KTLIARAVAN 246


Query: 1 KTLIARAVA 9
KTL+A+AVA
Sbjct: 514 KTLLAKAVA 522


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KTLIARAVAN 10
KTLIA+AVAN
Sbjct: 229 KTLIAKAVAN 238


Query: 1 KTLIARAVAN 10
KTL+A+AVAN
Sbjct: 502 KTLLAKAVAN 511


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 KTLIARAVAN 10
KTL+A+AVAN
Sbjct: 236 KTLLAKAVAN 245


Query: 1 KTLIARAVAN 10
KTL+A+AVAN
Sbjct: 509 KTLMAKAVAN 518


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 KTLIARAVAN 10
KTL+A+AVAN
Sbjct: 226 KTLLAKAVAN 235


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KTLIARAVAN 10
KTL+A+AVAN
Sbjct: 188 KTLLAKAVAN 197


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KTLIARAVAN 10
KTL+ARAVA+
Sbjct: 200 KTLLARAVAH 209


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KTLIARAVAN 10
KTL+ARA+AN
Sbjct: 259 KTLLARALAN 268


Query: 1 KTLIARAVA 9
KT++A+AVA
Sbjct: 534 KTMLAKAVA 542


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KTLIARAVAN 10
KTL+A+AVAN
Sbjct: 185 KTLMAKAVAN 194


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 1 KTLIARAVAN 10
KT++A+AVAN
Sbjct: 199 KTMLAKAVAN 208


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KTLIARAVAN 10
KTL+A+AVAN
Sbjct: 185 KTLMAKAVAN 194


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 KTLIARAVAN 10
KTL+ARAVA+
Sbjct: 200 KTLLARAVAH 209


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 KTLIARAVAN 10
KT++A+AVAN
Sbjct: 199 KTMLAKAVAN 208


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 KTLIARAVAN 10
KTL+A+AVAN
Sbjct: 226 KTLLAKAVAN 235


Query: 1 KTLIARAVAN 10
KTL+A+AVAN
Sbjct: 499 KTLLAKAVAN 508


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 1 KTLIARAVAN 10
KTL+A+AVAN
Sbjct: 206 KTLLAKAVAN 215


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 1 KTLIARAVAN 10
KT++A+AVAN
Sbjct: 197 KTMLAKAVAN 206


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KTLIARAVAN 10
KT+IA AVAN
Sbjct: 150 KTMIAAAVAN 159


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KTLIARAVA 9
KTL+ARA+A
Sbjct: 167 KTLMARALA 175


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 1 KTLIARAVAN 10
KTL+A+AVA+
Sbjct: 225 KTLLAKAVAH 234


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KTLIARAVAN 10
KTL+A+AVA+
Sbjct: 200 KTLLAKAVAH 209


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 KTLIARAVAN 10
KTL+A+AVA+
Sbjct: 195 KTLMAKAVAS 204


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 KTLIARAVA 9
KTL+A+AVA
Sbjct: 195 KTLLAKAVA 203


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 1 KTLIARAVA 9
KTL+A+AVA
Sbjct: 195 KTLLAKAVA 203


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 KTLIARAVAN 10
KTL+A+AVA+
Sbjct: 198 KTLLAKAVAH 207


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KTLIARAVA 9
KTL+A+AVA
Sbjct: 195 KTLLAKAVA 203


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 KTLIARAVA 9
KTL+A+AVA
Sbjct: 195 KTLLAKAVA 203


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KTLIARAVA 9
KTL+A+AVA
Sbjct: 181 KTLLAKAVA 189


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KTLIARAVAN 10
KTL+A+AVA+
Sbjct: 206 KTLLAKAVAH 215


>sp|PAN2_METTM|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter marburgensis (strain ATCC

Query: 1 KTLIARAVAN 10
KT++A+++AN
Sbjct: 170 KTMLAKSLAN 179


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KTLIARAVAN 10
KTL+A+AVA+
Sbjct: 206 KTLLAKAVAH 215


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KTLIARAVAN 10
KTL+A+AVA
Sbjct: 186 KTLLAKAVAG 195


>sp|PAN2_METTH|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 KTLIARAVAN 10
KT++A+++AN
Sbjct: 170 KTMLAKSLAN 179


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 1 KTLIARAVA 9
KTL+A+AVA
Sbjct: 195 KTLLAKAVA 203


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KTLIARAVAN 10
KTL+A+A+A+
Sbjct: 184 KTLMAKAIAH 193


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KTLIARAVA 9
KTL+A+AVA
Sbjct: 217 KTLLAKAVA 225


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KTLIARAVA 9
KT++A+AVA
Sbjct: 181 KTMLAKAVA 189


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 KTLIARAVA 9
KT++A+AVA
Sbjct: 181 KTMLAKAVA 189


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KTLIARAVA 9
KT++A+AVA
Sbjct: 181 KTMLAKAVA 189


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KTLIARAVA 9
KT++A+AVA
Sbjct: 181 KTMLAKAVA 189


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 KTLIARAVA 9
KT++A+AVA
Sbjct: 181 KTMLAKAVA 189


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 KTLIARAVA 9
KT++A+AVA
Sbjct: 181 KTMLAKAVA 189


>sp|RS9_THEAC|SMALL ribosomal subunit protein uS9|Thermoplasma acidophilum (strain

Query: 1 KTLIARAVA 9
KT +ARAVA
Sbjct: 8 KTAVARAVA 16


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 KTLIARAVA 9
KT++A+AVA
Sbjct: 181 KTMLAKAVA 189


>sp|ARGJ_ARCFU|ARGININE biosynthesis bifunctional protein ArgJ|Archaeoglobus fulgidus

Query: 3 LIARAVAN 10
LIARAVA+
Sbjct: 270 LIARAVAS 277


>sp|FAEHP_METTH|BIFUNCTIONAL enzyme Fae/Hps|Methanothermobacter thermautotrophicus (strain

Query: 1 KTLIARAVAN 10
+T +ARAVA+
Sbjct: 83 QTAVARAVAD 92


>sp|SRP19_METBU|SIGNAL recognition particle 19 kDa|Methanococcoides burtonii (strain DSM

Query: 1 KTLIARAVA 9
KT++AR +A
Sbjct: 78 KTMVARKIA 86




52|Sequence|256|265|RAVANETGAF

>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RAVANETGA 9
RAVANE+GA
Sbjct: 242 RAVANESGA 250


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RAVANETGAF 10
RA+ANE GA+
Sbjct: 264 RALANEIGAY 273


Query: 1 RAVANETGA 9
+AVA E+GA
Sbjct: 539 KAVATESGA 547


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 RAVANETGA 9
+AVANE+GA
Sbjct: 504 KAVANESGA 512


Query: 1 RAVANETGA 9
+AVANE GA
Sbjct: 231 KAVANEAGA 239


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 RAVANETGA 9
+AVANET A
Sbjct: 241 KAVANETSA 249


Query: 1 RAVANETGA 9
+AVANET A
Sbjct: 514 KAVANETNA 522


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 1 RAVANETGA 9
+AVANET A
Sbjct: 204 KAVANETNA 212


>sp|DEOC_THEVO|DEOXYRIBOSE-PHOSPHATE aldolase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RAVANETGA 9
+++ NETGA
Sbjct: 170 KSLGNETGA 178


>sp|RS10_METBU|SMALL ribosomal subunit protein uS10|Methanococcoides burtonii (strain

Query: 1 RAVANETG 8
+A+AN TG
Sbjct: 25 KAIANRTG 32


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RAVANETGA 9
+AVANE+ A
Sbjct: 507 KAVANESNA 515


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 1 RAVANETGA 9
+AVAN+T A
Sbjct: 202 KAVANQTNA 210




53|Sequence|261|270|ETGAFFFLIN

>sp|CRTY_HALSA|LYCOPENE beta-cyclase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ETGAFFFLIN 10
E GAFFF+ N
Sbjct: 210 EEGAFFFVTN 219


>sp|CRTY_HALS3|LYCOPENE beta-cyclase|Halobacterium salinarum (strain ATCC 29341

Query: 1 ETGAFFFLIN 10
E GAFFF+ N
Sbjct: 210 EEGAFFFVTN 219


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 ETGAFFFLIN 10
E GA F++IN
Sbjct: 236 EAGANFYVIN 245


>sp|ATGT_SULAC|TRNA-GUANINE(15) transglycosylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ETGAFFFLIN 10
ET AFF +IN
Sbjct: 27 ETPAFFPVIN 36


>sp|ATGT_SACS2|TRNA-GUANINE(15) transglycosylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ETGAFFFLIN 10
ET AFF +IN
Sbjct: 26 ETPAFFPVIN 35


>sp|TPIS_METMA|TRIOSEPHOSPHATE isomerase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ETGAFFFLIN 10
E GAF LIN
Sbjct: 83 EAGAFGTLIN 92


>sp|Y1401_PYRAB|PUTATIVE phosphate permease PYRAB14010|Pyrococcus abyssi (strain GE5 /

Query: 2 TGAFFF 7
TGA+FF
Sbjct: 54 TGAYFF 59


>sp|Y1654_ARCFU|UNCHARACTERIZED protein AF_1654|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ETGAFFFL 8
E G FFF+
Sbjct: 311 EKGVFFFI 318


>sp|Y640_PYRHO|PUTATIVE phosphate permease PH0640|Pyrococcus horikoshii (strain ATCC

Query: 2 TGAFFF 7
TGA+FF
Sbjct: 55 TGAYFF 60




54|Sequence|266|275|FFLINGPEIM

>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 FFLINGPEIM 10
F++INGPEIM
Sbjct: 241 FYVINGPEIM 250


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FFLINGPEIM 10
F INGPEIM
Sbjct: 252 FLSINGPEIM 261


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FFLINGPEIM 10
F +NGPEIM
Sbjct: 274 FITVNGPEIM 283


Query: 1 FFLINGPEIM 10
F + GPEI+
Sbjct: 549 FIAVRGPEIL 558


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FFLINGPEIM 10
F I+GPEIM
Sbjct: 244 FIPISGPEIM 253


>sp|APE1_SULTO|PROBABLE aminopeptidase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FFLINGPEIM 10
F++I GP IM
Sbjct: 734 FYIIRGPMIM 743


>sp|DADD_METTH|5'-DEOXYADENOSINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 LINGPEIM 10
LI GPEI+
Sbjct: 7 LITGPEIL 14


>sp|Y1432_METJA|UNCHARACTERIZED protein MJ1432|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FLINGPEIM 10
FLING ++M
Sbjct: 90 FLINGADVM 98


>sp|SYM_METMP|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FFLINGP 7
FF+IN P
Sbjct: 349 FFMINAP 355


>sp|SYM_METM7|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 FFLINGP 7
FF+IN P
Sbjct: 349 FFMINAP 355


>sp|SYM_METM5|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 FFLINGP 7
FF+IN P
Sbjct: 349 FFMINAP 355


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 2 FLINGPE 8
F+INGP+
Sbjct: 364 FVINGPD 370


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 2 FLINGPE 8
F+INGP+
Sbjct: 364 FVINGPD 370


>sp|RPO2N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 1 FFLINGPE 8
+F+ING E
Sbjct: 158 YFIINGSE 165


>sp|RPO2N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 1 FFLINGPE 8
+F+ING E
Sbjct: 158 YFIINGSE 165


>sp|RPO2N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanocaldococcus jannaschii (strain

Query: 1 FFLINGPE 8
+F+ING E
Sbjct: 150 YFIINGTE 157


>sp|PSB_METVS|PROTEASOME subunit beta|Methanococcus vannielii (strain ATCC 35089

Query: 3 LINGPEI 9
LINGP++
Sbjct: 120 LINGPKL 126


>sp|Y1488_METJA|UNCHARACTERIZED protein MJ1488|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FLINGPEIM 10
FLING E +
Sbjct: 86 FLINGKEYL 94


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 1 FFLINGPE 8
+F++NG E
Sbjct: 157 YFIVNGSE 164


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 FFLINGPE 8
+F++NG E
Sbjct: 149 YFIVNGSE 156


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 1 FFLINGPE 8
+F++NG E
Sbjct: 151 YFIVNGSE 158


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 1 FFLINGPE 8
+F++NG E
Sbjct: 151 YFIVNGSE 158


>sp|RPO2N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanococcus vannielii (strain ATCC

Query: 1 FFLINGPE 8
+F++NG E
Sbjct: 149 YFIVNGSE 156


>sp|RPO2N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 1 FFLINGPE 8
+F++NG E
Sbjct: 153 YFIVNGSE 160


>sp|IF6_NITMS|TRANSLATION initiation factor 6|Nitrosopumilus maritimus (strain SCM1)

Query: 3 LINGPEIM 10
L GPEIM
Sbjct: 206 LTTGPEIM 213


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 1 FFLINGPEIM 10
++ INGPE++
Sbjct: 797 WYDINGPEMV 806


>sp|NUCS_SULAC|ENDONUCLEASE NucS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 FLINGPEIM 10
F+IN P+++
Sbjct: 132 FIINNPDVI 140


>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 2 FLINGPE 8
++INGP+
Sbjct: 364 YIINGPD 370




55|Sequence|271|280|GPEIMSKLAG

>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GPEIMSKLAG 10
GPEIMSK G
Sbjct: 279 GPEIMSKFYG 288


Query: 1 GPEIMSKLAG 10
GPEI+SK G
Sbjct: 554 GPEILSKWVG 563


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 GPEIMSKLAG 10
GPEIMSK G
Sbjct: 246 GPEIMSKYVG 255


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GPEIMSKLAG 10
GPEIMSK G
Sbjct: 257 GPEIMSKYYG 266


Query: 1 GPEIMSKLAG 10
GPE++SK G
Sbjct: 534 GPEVLSKWVG 543


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GPEIMSKLAG 10
GPEIMSK G
Sbjct: 249 GPEIMSKYYG 258


Query: 1 GPEIMSKLAG 10
GPE++SK G
Sbjct: 522 GPELLSKWVG 531


>sp|THIM2_METST|HYDROXYETHYLTHIAZOLE kinase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GPEIMSKLAG 10
G E+MSK+ G
Sbjct: 197 GEEVMSKITG 206


>sp|MTAA_METBA|METHYLCOBAMIDE:COM methyltransferase MtaA|Methanosarcina barkeri

Query: 1 GPEIMSKLA 9
PE+M+KLA
Sbjct: 49 NPELMAKLA 57


>sp|MTAA_METBF|METHYLCOBAMIDE:COM methyltransferase MtaA|Methanosarcina barkeri (strain Fusaro /

Query: 1 GPEIMSKLA 9
PE+M+KLA
Sbjct: 49 NPELMAKLA 57


>sp|MOAA_SULAC|PROBABLE GTP 3',8-cyclase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PEIMSKL 8
PEI+SKL
Sbjct: 73 PEIISKL 79


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 PEIMSKLAG 10
PE SKL+G
Sbjct: 256 PEYASKLSG 264


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 GPEIMSKLAG 10
GP+++SK G
Sbjct: 529 GPQLLSKWVG 538




56|Sequence|276|285|SKLAGESESN

***** No hits found ******


57|Sequence|281|290|ESESNLRKAF

>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 ESESNLRKAF 10
E+E NLRK F
Sbjct: 256 ETEENLRKIF 265


>sp|RFCS_THEPD|REPLICATION factor C small subunit|Thermofilum pendens (strain DSM 2475

Query: 1 ESESNLRKAF 10
ES+ +LRKA
Sbjct: 191 ESQGDLRKAI 200


>sp|AROC_METMP|CHORISMATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ESESNLRKAF 10
ES+SN+ K F
Sbjct: 175 ESDSNIEKLF 184




58|Sequence|286|295|LRKAFEEAEK

>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 LRKAFEEAE 9
LRK FEEAE
Sbjct: 261 LRKIFEEAE 269


>sp|Y897_ARCFU|UNCHARACTERIZED protein AF_0897|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RKAFEEAEK 10
RKA+EEA+K
Sbjct: 342 RKAYEEAKK 350


>sp|FBPAP_THEKO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus kodakarensis (strain ATCC

Query: 3 KAFEEAEK 10
KAFEEA K
Sbjct: 79 KAFEEATK 86


>sp|KHSE_METAR|HOMOSERINE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LRKAFEEA 8
+RK FEEA
Sbjct: 269 MRKKFEEA 276


>sp|Y002_METMP|UPF0425 pyridoxal phosphate-dependent protein MMP0002|Methanococcus

Query: 1 LRKAFEEAEK 10
L+ AFE AEK
Sbjct: 261 LKDAFERAEK 270


>sp|MAX1_METAC|SODIUM/CALCIUM exchanger MaX1|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 FEEAEK 10
FEEAEK
Sbjct: 145 FEEAEK 150


>sp|COAD_PYRFU|PHOSPHOPANTETHEINE adenylyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LRKAFEEAE 9
LRKAFE E
Sbjct: 25 LRKAFEVGE 33


>sp|AATE_METVS|A-TYPE ATP synthase subunit E|Methanococcus vannielii (strain ATCC 35089

Query: 1 LRKAFEEAEK 10
++KA EEAEK
Sbjct: 33 IKKAHEEAEK 42


>sp|KAE1_PYRFU|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus furiosus

Query: 1 LRKAFEEA 8
LRKA EEA
Sbjct: 55 LRKALEEA 62


>sp|SYK_PYRAB|LYSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 LRKAFEEAEK 10
+RKAFE EK
Sbjct: 140 IRKAFEGKEK 149


>sp|TRUA_METAR|TRNA pseudouridine synthase A|Methanocella arvoryzae (strain DSM 22066

Query: 1 LRKAFEEA 8
LRKA EEA
Sbjct: 30 LRKALEEA 37


>sp|AMPA_AERPE|PROBABLE cytosol aminopeptidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LRKAFEEAEK 10
L +AFEEA +
Sbjct: 381 LARAFEEASR 390


>sp|RL31_STAMF|LARGE ribosomal subunit protein eL31|Staphylothermus marinus (strain

Query: 1 LRKAFEEAEK 10
+R+ F+EAEK
Sbjct: 39 VRRHFKEAEK 48


>sp|Y158_METJA|UPF0425 pyridoxal phosphate-dependent protein MJ0158|Methanocaldococcus

Query: 1 LRKAFEEAE 9
+RKAFE A+
Sbjct: 259 IRKAFERAK 267


>sp|Y2042_PYRFU|UPF0215 protein PF2042|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LRKAFEEAEK 10
LRK FE+ EK
Sbjct: 119 LRKHFEDWEK 128


>sp|UPPS_THEKO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Thermococcus

Query: 1 LRKAFEEAEK 10
+RKA EEAE+
Sbjct: 139 VRKAAEEAER 148


>sp|RRP41_SULAC|EXOSOME complex component Rrp41|Sulfolobus acidocaldarius (strain ATCC

Query: 2 RKAFEEAEK 10
R+AFE A+K
Sbjct: 212 RRAFELAQK 220


>sp|D89S1_ARCFU|DAMAGE-CONTROL phosphatase AF_1104|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RKAFEEAE 9
RKA EEA+
Sbjct: 232 RKALEEAD 239


>sp|AATC_THEKO|A-TYPE ATP synthase subunit C|Thermococcus kodakarensis (strain ATCC

Query: 1 LRKAFEEAEK 10
+RK EEAEK
Sbjct: 287 IRKVREEAEK 296




59|Sequence|291|300|EEAEKNAPAI

>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 EEAEKNAPAI 10
EEAE+NAP+I
Sbjct: 266 EEAEENAPSI 275


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EEAEKNAPAI 10
+EAE+NAP+I
Sbjct: 299 KEAEENAPSI 308


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EEAEKNAPAI 10
EEA++NAP+I
Sbjct: 269 EEAKENAPSI 278


>sp|PURK_SACS2|N5-CARBOXYAMINOIMIDAZOLE ribonucleotide synthase|Saccharolobus solfataricus (strain ATCC

Query: 2 EAEKNAPA 9
E +KNAPA
Sbjct: 38 ENDKNAPA 45


>sp|HPRT_ACIB4|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Aciduliprofundum boonei (strain DSM

Query: 1 EEAEKNAPAI 10
+E+ KNAP I
Sbjct: 5 KESLKNAPVI 14




60|Sequence|296|305|NAPAIIFIDE

>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NAPAIIFIDE 10
NAP+IIFIDE
Sbjct: 304 NAPSIIFIDE 313


Query: 2 APAIIFIDE 10
AP +IF DE
Sbjct: 580 APTVIFFDE 588


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 NAPAIIFIDE 10
NAP+IIFIDE
Sbjct: 271 NAPSIIFIDE 280


Query: 1 NAPAIIFIDE 10
+AP IIF DE
Sbjct: 544 SAPCIIFFDE 553


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NAPAIIFIDE 10
NAP+IIFIDE
Sbjct: 274 NAPSIIFIDE 283


Query: 2 APAIIFIDE 10
AP +IF DE
Sbjct: 548 APCVIFFDE 556


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 2 APAIIFIDE 10
APAIIFIDE
Sbjct: 232 APAIIFIDE 240


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 1 NAPAIIFIDE 10
N PA+IFIDE
Sbjct: 242 NEPAVIFIDE 251


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 APAIIFIDE 10
AP+IIFIDE
Sbjct: 246 APSIIFIDE 254


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 2 APAIIFIDE 10
AP+IIFIDE
Sbjct: 272 APSIIFIDE 280


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 APAIIFIDE 10
AP IIFIDE
Sbjct: 233 APTIIFIDE 241


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 APAIIFIDE 10
AP+IIFIDE
Sbjct: 252 APSIIFIDE 260


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 2 APAIIFIDE 10
AP IIFIDE
Sbjct: 271 APTIIFIDE 279


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 APAIIFIDE 10
AP+IIFIDE
Sbjct: 252 APSIIFIDE 260


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NAPAIIFIDE 10
AP+IIFIDE
Sbjct: 226 KAPSIIFIDE 235


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 APAIIFIDE 10
AP+IIFIDE
Sbjct: 283 APSIIFIDE 291


Query: 2 APAIIFIDE 10
APAI+F+DE
Sbjct: 560 APAIVFLDE 568


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 APAIIFIDE 10
AP+I+FIDE
Sbjct: 246 APSIVFIDE 254


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 APAIIFIDE 10
AP+IIFIDE
Sbjct: 234 APSIIFIDE 242


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 2 APAIIFIDE 10
AP IIFIDE
Sbjct: 230 APTIIFIDE 238


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 APAIIFIDE 10
AP IIFIDE
Sbjct: 231 APTIIFIDE 239


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 APAIIFIDE 10
AP IIFIDE
Sbjct: 230 APTIIFIDE 238


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 APAIIFIDE 10
AP IIFIDE
Sbjct: 231 APTIIFIDE 239


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 APAIIFIDE 10
AP+IIFIDE
Sbjct: 263 APSIIFIDE 271


>sp|PAN2_METTM|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter marburgensis (strain ATCC

Query: 2 APAIIFIDE 10
AP++IFIDE
Sbjct: 216 APSVIFIDE 224


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NAPAIIFIDE 10
AP+I+FIDE
Sbjct: 226 KAPSIVFIDE 235


>sp|PAN2_METTH|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 NAPAIIFIDE 10
AP++IFIDE
Sbjct: 215 TAPSVIFIDE 224


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 APAIIFIDE 10
AP+IIFIDE
Sbjct: 227 APSIIFIDE 235


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 APAIIFIDE 10
AP+IIFIDE
Sbjct: 227 APSIIFIDE 235


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 APAIIFIDE 10
AP+IIFIDE
Sbjct: 227 APSIIFIDE 235


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 APAIIFIDE 10
AP+IIFIDE
Sbjct: 227 APSIIFIDE 235


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 APAIIFIDE 10
AP+IIFIDE
Sbjct: 227 APSIIFIDE 235


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 APAIIFIDE 10
AP+IIFIDE
Sbjct: 227 APSIIFIDE 235


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 APAIIFIDE 10
+P+IIFIDE
Sbjct: 244 SPSIIFIDE 252


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 APAIIFIDE 10
+P+IIFIDE
Sbjct: 246 SPSIIFIDE 254


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NAPAIIFIDE 10
+AP I+FIDE
Sbjct: 212 SAPCIVFIDE 221


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 NAPAIIFIDE 10
++P+IIFIDE
Sbjct: 281 DSPSIIFIDE 290


Query: 2 APAIIFIDE 10
AP +IF DE
Sbjct: 555 APTVIFFDE 563


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 2 APAIIFIDE 10
AP+I+FIDE
Sbjct: 232 APSILFIDE 240


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 2 APAIIFIDE 10
+P+IIFIDE
Sbjct: 252 SPSIIFIDE 260


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 3 PAIIFIDE 10
PAIIFIDE
Sbjct: 246 PAIIFIDE 253


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 3 PAIIFIDE 10
PA++FIDE
Sbjct: 242 PAVVFIDE 249


>sp|Y1508_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 NAPAIIFIDE 10
N P IIF DE
Sbjct: 158 NNPKIIFADE 167


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 2 APAIIFIDE 10
+P IIFIDE
Sbjct: 241 SPCIIFIDE 249


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 2 APAIIFIDE 10
+P IIFIDE
Sbjct: 241 SPCIIFIDE 249


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 2 APAIIFIDE 10
+P IIFIDE
Sbjct: 241 SPCIIFIDE 249


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 2 APAIIFIDE 10
+P IIFIDE
Sbjct: 241 SPCIIFIDE 249


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 2 APAIIFIDE 10
+P IIFIDE
Sbjct: 241 SPCIIFIDE 249


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PAIIFIDE 10
P IIFIDE
Sbjct: 202 PVIIFIDE 209


>sp|Y085_METJA|UNCHARACTERIZED lipoprotein MJ0085|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PAIIFIDE 10
P IIFIDE
Sbjct: 267 PDIIFIDE 274


>sp|TIAS_METJA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocaldococcus jannaschii

Query: 3 PAIIFIDE 10
P I+F+DE
Sbjct: 96 PGIVFLDE 103


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 1 NAPAIIFI 8
N PA+IF+
Sbjct: 14 NGPAVIFL 21


>sp|NDRZ_THEAC|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Thermoplasma

Query: 3 PAIIFIDE 10
P +IF+DE
Sbjct: 408 PGLIFLDE 415


>sp|IF2P_METMJ|PROBABLE translation initiation factor IF-2|Methanoculleus marisnigri

Query: 1 NAPAIIFID 9
N P ++FID
Sbjct: 69 NVPGLLFID 77


>sp|IF2P_METB6|PROBABLE translation initiation factor IF-2|Methanoregula boonei (strain

Query: 1 NAPAIIFID 9
N P ++FID
Sbjct: 68 NIPGLLFID 76


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 3 PAIIFIDE 10
P ++FIDE
Sbjct: 246 PVVVFIDE 253


>sp|Y1662_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 3 PAIIFIDE 10
P I+F+DE
Sbjct: 465 PKILFLDE 472


>sp|LADH_METMP|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 2 APAIIFIDE 10
+PA+I IDE
Sbjct: 351 SPAVINIDE 359


>sp|LADH_METM5|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 2 APAIIFIDE 10
+PA+I IDE
Sbjct: 351 SPAVINIDE 359


>sp|Y158_METJA|UPF0425 pyridoxal phosphate-dependent protein MJ0158|Methanocaldococcus

Query: 1 NAPAIIFIDE 10
N AI+F+D+
Sbjct: 170 NKEAIVFVDD 179


>sp|HIS8_METMA|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NAPAIIFIDE 10
N A++F+DE
Sbjct: 191 NTDALVFVDE 200


>sp|DPCKG_METMJ|GTP-DEPENDENT dephospho-CoA kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PAIIFID 9
PA+IF+D
Sbjct: 103 PAVIFVD 109


>sp|HIS8_METAC|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NAPAIIFIDE 10
N A++F+DE
Sbjct: 190 NTHALVFVDE 199


>sp|ADEC_METMJ|ADENINE deaminase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 NAPAIIFIDE 10
N P ++F DE
Sbjct: 134 NVPGVLFGDE 143


>sp|KAE1B_METAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 APAIIFIDE 10
A A+I++DE
Sbjct: 359 AEAVIYLDE 367


>sp|HIS8_METBF|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NAPAIIFIDE 10
N A++F+DE
Sbjct: 189 NTRALVFVDE 198


>sp|Y325_METJA|UNCHARACTERIZED protein MJ0325|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 AIIFIDE 10
A++FIDE
Sbjct: 65 ALVFIDE 71


>sp|CDC63_SACS2|ORC1-TYPE DNA replication protein 3|Saccharolobus solfataricus (strain ATCC

Query: 1 NAPAIIFIDE 10
N AII++DE
Sbjct: 142 NIRAIIYLDE 151


>sp|DAPF_METTH|DIAMINOPIMELATE epimerase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 NAPAIIFIDE 10
N AIIF+D+
Sbjct: 165 NPHAIIFVDD 174


>sp|LADH_METM7|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 3 PAIIFIDE 10
PA+I IDE
Sbjct: 352 PAVINIDE 359




61|Sequence|301|310|IFIDELDAIA

>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IFIDELDAIA 10
IFIDELDAIA
Sbjct: 238 IFIDELDAIA 247


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IFIDELDAIA 10
IFIDE+DAIA
Sbjct: 309 IFIDEIDAIA 318


Query: 1 IFIDELDAIA 10
IF DE+D+IA
Sbjct: 584 IFFDEIDSIA 593


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IFIDELDAIA 10
IFIDELD+IA
Sbjct: 256 IFIDELDSIA 265


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 IFIDELDAIA 10
IFIDELD+IA
Sbjct: 286 IFIDELDSIA 295


Query: 1 IFIDELDAIA 10
IF DELD++A
Sbjct: 559 IFFDELDSLA 568


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IFIDELDAIA 10
IFIDELD+IA
Sbjct: 256 IFIDELDSIA 265


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 IFIDELDAIA 10
IFIDE+DAIA
Sbjct: 276 IFIDEIDAIA 285


Query: 1 IFIDELDAIA 10
IF DE+DAIA
Sbjct: 549 IFFDEIDAIA 558


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IFIDELDAIA 10
IFIDE+DAIA
Sbjct: 267 IFIDEIDAIA 276


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 IFIDELDAIA 10
IFIDE+DA+A
Sbjct: 248 IFIDEIDAVA 257


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 1 IFIDELDAIA 10
IFIDE+DAIA
Sbjct: 247 IFIDEIDAIA 256


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IFIDELDAIA 10
+FIDELDAI
Sbjct: 217 VFIDELDAIG 226


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IFIDELDAIA 10
IFIDE+D+IA
Sbjct: 287 IFIDEIDSIA 296


Query: 1 IFIDELDAIA 10
+F+DE+D+IA
Sbjct: 564 VFLDEIDSIA 573


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IFIDELDAIA 10
IFIDE+D+IA
Sbjct: 279 IFIDEIDSIA 288


Query: 1 IFIDELDAIA 10
IF DE+D++A
Sbjct: 552 IFFDEIDSLA 561


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 1 IFIDELDAIA 10
IFIDE+DA+A
Sbjct: 245 IFIDEIDAVA 254


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 IFIDELDAIA 10
IFIDE+DA+A
Sbjct: 249 IFIDEIDAVA 258


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IFIDELDAIA 10
IFIDE+DAI
Sbjct: 237 IFIDEIDAIG 246


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 IFIDELDAIA 10
IFIDE+DA+A
Sbjct: 245 IFIDEIDAVA 254


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 IFIDELDAIA 10
+FIDE+DAIA
Sbjct: 236 LFIDEIDAIA 245


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 IFIDELDAIA 10
IFIDE+DA+A
Sbjct: 245 IFIDEIDAVA 254


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IFIDELDAIA 10
IFIDE+DA+A
Sbjct: 245 IFIDEIDAVA 254


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IFIDELDAIA 10
IFIDE+DAI
Sbjct: 235 IFIDEIDAIG 244


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 IFIDELDAIA 10
IFIDE+DAI
Sbjct: 250 IFIDEIDAIG 259


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 1 IFIDELDAIA 10
IFIDE+DA+A
Sbjct: 245 IFIDEIDAVA 254


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 IFIDELDAIA 10
IFIDE+DAI
Sbjct: 234 IFIDEIDAIG 243


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 IFIDELDAIA 10
IFIDE+DAI
Sbjct: 250 IFIDEIDAIG 259


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 IFIDELDAIA 10
IFIDE+DAI
Sbjct: 235 IFIDEIDAIG 244


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 1 IFIDELDAIA 10
IFIDE+DAI
Sbjct: 236 IFIDEIDAIG 245


>sp|PAN2_METTH|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 IFIDELDAIA 10
IFIDE+DAI
Sbjct: 220 IFIDEMDAIG 229


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 1 IFIDELDAIA 10
+FIDE+DA+A
Sbjct: 249 VFIDEIDAVA 258


>sp|PAN2_METTM|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter marburgensis (strain ATCC

Query: 1 IFIDELDAIA 10
IFIDE+DAI
Sbjct: 220 IFIDEMDAIG 229


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 1 IFIDELDAIA 10
IFIDE+DA+
Sbjct: 275 IFIDEIDAVG 284


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 IFIDELDAIA 10
+FIDE+DAIA
Sbjct: 245 VFIDEIDAIA 254


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IFIDELDAIA 10
IFIDE+DAI
Sbjct: 234 IFIDEIDAIG 243


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 IFIDELDAIA 10
IFIDE+DAI
Sbjct: 231 IFIDEIDAIG 240


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 IFIDELDAIA 10
+FIDE+DAI
Sbjct: 250 VFIDEIDAIG 259


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 IFIDELDAIA 10
IFIDE+DAI
Sbjct: 276 IFIDEIDAIG 285


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 IFIDELDAIA 10
IFIDE+DAI
Sbjct: 231 IFIDEIDAIG 240


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IFIDELDAIA 10
IFIDE+DAI
Sbjct: 231 IFIDEIDAIG 240


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IFIDELDAIA 10
IFIDE+DAI
Sbjct: 231 IFIDEIDAIG 240


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 IFIDELDAIA 10
IFIDE+DAI
Sbjct: 231 IFIDEIDAIG 240


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 IFIDELDAIA 10
IFIDE+DAI
Sbjct: 231 IFIDEIDAIG 240


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IFIDELDAIA 10
IFIDE+DAI
Sbjct: 231 IFIDEIDAIG 240


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IFIDELDAIA 10
+FIDE+DAI
Sbjct: 231 VFIDEIDAIG 240


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IFIDELDAI 9
IFIDE+DA+
Sbjct: 205 IFIDEIDAL 213


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 1 IFIDELDAIA 10
IFIDE+D+I
Sbjct: 256 IFIDEIDSIG 265


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IFIDELDAI 9
IF+D++DAI
Sbjct: 179 IFVDDVDAI 187


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 IFIDELDAI 9
+F+D++DA+
Sbjct: 217 VFVDDVDAV 225


>sp|RFCS_THEKO|REPLICATION factor C small subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 IFIDELDAI 9
IF+DE DA+
Sbjct: 654 IFLDEADAL 662


>sp|RFCS_PYRHO|REPLICATION factor C small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IFIDELDAI 9
IF+DE DA+
Sbjct: 641 IFLDEADAL 649


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 IFIDELDAI 9
IF+DE DA+
Sbjct: 615 IFLDEADAL 623


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IFIDELDA 8
IF+D++DA
Sbjct: 210 IFVDDVDA 217


>sp|Y182_METJA|UNCHARACTERIZED protein MJ0182|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IFIDELD 7
IFIDELD
Sbjct: 148 IFIDELD 154


>sp|RFCS_PYRFU|REPLICATION factor C small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IFIDELDAI 9
IF+DE DA+
Sbjct: 639 IFLDEADAL 647


>sp|Y1583_METJA|PROBABLE S-adenosyl-L-methionine-binding protein MJ1583|Methanocaldococcus

Query: 1 IFIDELDA 8
IFID++DA
Sbjct: 98 IFIDKIDA 105


>sp|AROE_THEAC|SHIKIMATE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC

Query: 2 FIDELDAIA 10
F+D+LD IA
Sbjct: 72 FLDDLDEIA 80


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IFIDELDA 8
IF+D++DA
Sbjct: 211 IFVDDVDA 218


>sp|RFCS_METBF|REPLICATION factor C small subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 IFIDELDAIA 10
IF+DE DA+
Sbjct: 111 IFLDEADALT 120


>sp|RFCS_METAR|REPLICATION factor C small subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 IFIDELDAI 9
IF+DE DA+
Sbjct: 106 IFLDEADAL 114


>sp|RFCS_METVS|REPLICATION factor C small subunit|Methanococcus vannielii (strain ATCC 35089

Query: 1 IFIDELDAI 9
IF+DE DA+
Sbjct: 104 IFLDESDAL 112


>sp|RFCS_METMA|REPLICATION factor C small subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IFIDELDAIA 10
IF+DE DA+
Sbjct: 115 IFLDEADALT 124


>sp|RFCS_METAC|REPLICATION factor C small subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 IFIDELDAIA 10
IF+DE DA+
Sbjct: 115 IFLDEADALT 124


>sp|RFCS_HALSA|REPLICATION factor C small subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 IFIDELDAI 9
IF+DE DA+
Sbjct: 110 IFLDEADAL 118


>sp|RFCS_HALS3|REPLICATION factor C small subunit|Halobacterium salinarum (strain ATCC 29341

Query: 1 IFIDELDAI 9
IF+DE DA+
Sbjct: 110 IFLDEADAL 118


>sp|RFCS_HALMA|REPLICATION factor C small subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 IFIDELDAI 9
IF+DE DA+
Sbjct: 114 IFLDEADAL 122


>sp|END4_THEVO|PROBABLE endonuclease 4|Thermoplasma volcanium (strain ATCC 51530

Query: 2 FIDELDA 8
FIDELD+
Sbjct: 198 FIDELDS 204


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 1 IFIDELDA 8
IF+D++DA
Sbjct: 210 IFVDDVDA 217


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IFIDELDA 8
IF+D++DA
Sbjct: 210 IFVDDVDA 217


>sp|RFCS_NATPD|REPLICATION factor C small subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IFIDELDAI 9
IF+DE DA+
Sbjct: 112 IFLDEADAL 120


>sp|RFCS_METM7|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C7 /

Query: 1 IFIDELDAI 9
IF+DE DA+
Sbjct: 104 IFLDESDAL 112


>sp|RFCS_ARCFU|REPLICATION factor C small subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IFIDELDAIA 10
IF+DE DA+
Sbjct: 106 IFLDEADALT 115


>sp|RFCS_METM6|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C6 /

Query: 1 IFIDELDAIA 10
IF+DE DA+
Sbjct: 104 IFLDESDALT 113


>sp|RFCS_METM5|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C5 /

Query: 1 IFIDELDAI 9
IF+DE DA+
Sbjct: 104 IFLDESDAL 112


>sp|RFCS_METMP|REPLICATION factor C small subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 IFIDELDAIA 10
IF+DE DA+
Sbjct: 104 IFLDESDALT 113


>sp|MFNA_HALSA|PROBABLE L-aspartate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 2 FIDELDAIA 10
F+D++DA+A
Sbjct: 347 FLDDVDALA 355


>sp|MFNA_HALS3|PROBABLE L-aspartate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 2 FIDELDAIA 10
F+D++DA+A
Sbjct: 347 FLDDVDALA 355


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 FIDELDAI 9
F+DELD I
Sbjct: 502 FLDELDKI 509


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 IFIDELDAIA 10
+F DE+DAI+
Sbjct: 214 LFGDEIDAIS 223


>sp|MTRB_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanosarcina barkeri (strain

Query: 3 IDELDAIA 10
+D+LDAIA
Sbjct: 40 VDKLDAIA 47


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IFIDELDAI 9
IF+DE DA+
Sbjct: 1092 IFLDESDAL 1100


>sp|GGR_METJA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DELDAIA 10
DELDA+A
Sbjct: 351 DELDALA 357


>sp|KAE1_THEPD|TRNA N6-adenosine threonylcarbamoyltransferase|Thermofilum pendens

Query: 1 IFIDELDAIA 10
I ++E+DA+A
Sbjct: 72 ISVEEVDAVA 81


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 IFIDELDAI 9
I +D++DAI
Sbjct: 281 ILVDDVDAI 289


>sp|TRPC_METJA|INDOLE-3-GLYCEROL phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 FIDELD 7
FIDELD
Sbjct: 30 FIDELD 35


>sp|RFCS_NANEQ|REPLICATION factor C small subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 IFIDELDAIA 10
+F+DE DA+
Sbjct: 103 VFLDEADALT 112


>sp|MTRB_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanosarcina mazei (strain ATCC

Query: 3 IDELDAIA 10
+D+LDAIA
Sbjct: 40 VDKLDAIA 47


>sp|CDC6A_HALMA|ORC1-TYPE DNA replication protein 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 IFIDELDAIA 10
I +DE+DAI
Sbjct: 146 IVLDEIDAIG 155


>sp|RFCS_METB6|REPLICATION factor C small subunit|Methanoregula boonei (strain DSM 21154

Query: 1 IFIDELDAI 9
+F+DE DA+
Sbjct: 107 LFLDEADAL 115


>sp|RAD50_HALSA|DNA double-strand break repair Rad50|Halobacterium salinarum (strain

Query: 4 DELDAIA 10
DELDA+A
Sbjct: 489 DELDAVA 495


>sp|RFCS_METHJ|REPLICATION factor C small subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 IFIDELDAI 9
+F+DE DA+
Sbjct: 107 LFLDEADAL 115


>sp|RFCS_METLZ|REPLICATION factor C small subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 IFIDELDAI 9
+F+DE DA+
Sbjct: 107 LFLDEADAL 115


>sp|CDC6A_HALSA|ORC1-TYPE DNA replication protein 10|Halobacterium salinarum (strain ATCC

Query: 1 IFIDELDAIA 10
I +DE+DAI
Sbjct: 146 IVLDEVDAIG 155


>sp|RFCS_METMJ|REPLICATION factor C small subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 IFIDELDAI 9
+F+DE DA+
Sbjct: 107 LFLDEADAL 115




62|Sequence|306|315|LDAIAPKREK

>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LDAIAPKRE 9
+DAIAPKRE
Sbjct: 314 IDAIAPKRE 322


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 LDAIAPKRE 9
LD+IAPKRE
Sbjct: 291 LDSIAPKRE 299


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LDAIAPKREK 10
+D+IAPKRE+
Sbjct: 292 IDSIAPKREE 301


Query: 1 LDAIAPKR 8
+D+IAP+R
Sbjct: 569 IDSIAPRR 576


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LDAIAPKREK 10
+D+IAPKRE+
Sbjct: 284 IDSIAPKREE 293


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 LDAIAPKREK 10
+DAIAPKR++
Sbjct: 281 IDAIAPKRDE 290


Query: 1 LDAIAPKR 8
+DAIAPKR
Sbjct: 554 IDAIAPKR 561


>sp|RS6E_METAR|SMALL ribosomal subunit protein eS6|Methanocella arvoryzae (strain DSM

Query: 1 LDAIAPKREK 10
LD +APK+EK
Sbjct: 120 LDELAPKKEK 129


>sp|G1PDH_THESM|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus sibiricus (strain DSM 12597

Query: 1 LDAIAPK 7
LDAIAPK
Sbjct: 257 LDAIAPK 263


>sp|ASSY_METHJ|ARGININOSUCCINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LDAIAPKREK 10
L+ IAP RE+
Sbjct: 137 LEVIAPIRER 146


>sp|PURA_METBF|ADENYLOSUCCINATE synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LDAIAPKREK 10
L+ +AP++EK
Sbjct: 159 LEELAPQKEK 168


>sp|PURA2_METAC|ADENYLOSUCCINATE synthetase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LDAIAPKREK 10
L+ +AP++EK
Sbjct: 159 LEELAPQKEK 168


>sp|PURA_METMA|ADENYLOSUCCINATE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LDAIAPKREK 10
L+ +AP++EK
Sbjct: 159 LEELAPQKEK 168




63|Sequence|311|320|PKREKTHGEV

>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PKREKTHGEV 10
PKRE+ GEV
Sbjct: 297 PKREEVQGEV 306


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PKREKTHGEV 10
PKRE GEV
Sbjct: 319 PKREDVTGEV 328


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PKREKTHGEV 10
PKRE+ GEV
Sbjct: 289 PKREEVTGEV 298


>sp|GLCDH_SACSO|GLUCOSE 1-dehydrogenase|Saccharolobus solfataricus (Sulfolobus

Query: 3 REKTHGEV 10
REK HGE+
Sbjct: 352 REKEHGEI 359


>sp|GLCD1_SACS2|GLUCOSE 1-dehydrogenase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 REKTHGEV 10
REK HGE+
Sbjct: 352 REKEHGEI 359


>sp|Y175_METJA|UNCHARACTERIZED protein MJ0175|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EKTHGEV 10
EKTHG++
Sbjct: 193 EKTHGDI 199


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 PKREKTHGEV 10
PKR++ GEV
Sbjct: 286 PKRDEATGEV 295


>sp|IDI2_METKA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanopyrus kandleri (strain AV19 /

Query: 3 REKTHGEV 10
R K HGE+
Sbjct: 225 RSKAHGEI 232


>sp|G3P_METTH|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PKREKTHGE 9
P+REK GE
Sbjct: 55 PEREKLFGE 63


>sp|RL4_HALSA|LARGE ribosomal subunit protein uL4|Halobacterium salinarum (strain

Query: 1 PKREKTHG 8
PK EK HG
Sbjct: 92 PKAEKDHG 99


>sp|RL4_HALS3|LARGE ribosomal subunit protein uL4|Halobacterium salinarum (strain

Query: 1 PKREKTHG 8
PK EK HG
Sbjct: 92 PKAEKDHG 99


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 PKREKTHGEV 10
PKRE GEV
Sbjct: 296 PKREDVTGEV 305




64|Sequence|316|325|THGEVERRIV

>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 HGEVERRIV 10
GEVERR+V
Sbjct: 303 QGEVERRVV 311


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 3 GEVERRIV 10
GEVERR+V
Sbjct: 303 GEVERRVV 310


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GEVERRIV 10
GEVERR+V
Sbjct: 296 GEVERRVV 303


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 3 GEVERRIV 10
GEVERR+V
Sbjct: 293 GEVERRLV 300


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GEVERRIV 10
GEVE+R+V
Sbjct: 326 GEVEKRVV 333


>sp|HTPX2_METMA|PROTEASE HtpX homolog 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 THGEVERRI 9
TH VE+RI
Sbjct: 275 THPSVEKRI 283


>sp|OGT_METMA|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 THGEVERRI 9
T+GE+ +RI
Sbjct: 94 TYGEIAKRI 102


>sp|TRUD_METTH|PROBABLE tRNA pseudouridine synthase D|Methanothermobacter

Query: 3 GEVERRIV 10
GE+ERRI+
Sbjct: 340 GEIERRIL 347


>sp|COBS_METTH|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanothermobacter thermautotrophicus

Query: 1 THGEVERRI 9
+HG ER+I
Sbjct: 91 SHGSFERKI 99


>sp|RL30_AERPE|LARGE ribosomal subunit protein uL30|Aeropyrum pernix (strain ATCC

Query: 1 THGEVERRIV 10
T+GE+E R++
Sbjct: 56 TYGEIEERVL 65


>sp|TRM1_PYRCJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum calidifontis

Query: 1 THGEVER 7
T+GEVER
Sbjct: 346 TYGEVER 352


>sp|ENO_NATPD|ENOLASE pharaonis (strain ATCC 35678

Query: 2 HGEVERRI 9
HGEV+R++
Sbjct: 177 HGEVQRQL 184


>sp|QUEE_PYRAE|7-CARBOXY-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HGEVERRI 9
HGE RRI
Sbjct: 189 HGEALRRI 196


>sp|CPGS_THEON|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus onnurineus (strain

Query: 3 GEVERRI 9
GEVER+I
Sbjct: 41 GEVERKI 47


>sp|G1PDH_CALMQ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Caldivirga maquilingensis (strain ATCC

Query: 2 HGEVERRIV 10
HGE E RIV
Sbjct: 216 HGEEETRIV 224


>sp|MTM1_METJA|TYPE II methyltransferase M.MjaI|Methanocaldococcus jannaschii (strain

Query: 1 THGEVERR 8
TH ++ERR
Sbjct: 216 THPKIERR 223


>sp|ASRAC_PYRHO|ALANINE/SERINE racemase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GEVERRIV 10
G+VER++V
Sbjct: 464 GKVERKVV 471


>sp|GATE_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus vannielii (strain ATCC

Query: 2 HGEVER 7
HGE+ER
Sbjct: 40 HGEIER 45


>sp|TRM5B_METJA|TRNA (guanine(37)-N(1))-methyltransferase Trm5b|Methanocaldococcus

Query: 2 HGEVERRIV 10
HGE RRI+
Sbjct: 11 HGEQTRRIL 19


>sp|Y154_ARCFU|UNCHARACTERIZED protein AF_0154|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GEVERR 8
GEVERR
Sbjct: 100 GEVERR 105


>sp|SYFA_THEVO|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 2 HGEVERRI 9
H E+E+RI
Sbjct: 287 HPEIEKRI 294


>sp|PCCB_HALMT|PROPIONYL-COA carboxylase, carboxyltransferase subunit|Haloferax mediterranei

Query: 2 HGEVERRIV 10
HGEV+ R V
Sbjct: 80 HGEVDGRTV 88


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 1 THGEVERRIV 10
HGEV R+V
Sbjct: 185 AHGEVAFRVV 194


>sp|GATE_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain DSM

Query: 2 HGEVER 7
HGE+ER
Sbjct: 40 HGEIER 45


>sp|GATE_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C7 /

Query: 2 HGEVER 7
HGE+ER
Sbjct: 40 HGEIER 45


>sp|GATE_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C5 /

Query: 2 HGEVER 7
HGE+ER
Sbjct: 40 HGEIER 45


>sp|COST_HALSA|TRANSDUCER protein CosT|Halobacterium salinarum (strain ATCC 700922

Query: 3 GEVERRI 9
G++ERRI
Sbjct: 668 GDIERRI 674


>sp|COST_HALS3|TRANSDUCER protein CosT|Halobacterium salinarum (strain ATCC 29341

Query: 3 GEVERRI 9
G++ERRI
Sbjct: 668 GDIERRI 674




65|Sequence|321|330|ERRIVSQLLT

>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ERRIVSQLLT 10
ERR+V+QLLT
Sbjct: 307 ERRVVAQLLT 316


Query: 3 RIVSQLLT 10
RIV+QLLT
Sbjct: 587 RIVNQLLT 594


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 ERRIVSQLLT 10
ERR+V+QLLT
Sbjct: 306 ERRVVAQLLT 315


Query: 3 RIVSQLLT 10
R+V+QLLT
Sbjct: 582 RVVNQLLT 589


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 ERRIVSQLLT 10
ERR+V+QLLT
Sbjct: 296 ERRLVAQLLT 305


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ERRIVSQLLT 10
E+R+V+QLLT
Sbjct: 329 EKRVVAQLLT 338


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ERRIVSQLL 9
ERR+V+QLL
Sbjct: 299 ERRVVAQLL 307


Query: 3 RIVSQLLT 10
R+VSQLLT
Sbjct: 575 RVVSQLLT 582


>sp|RADB_PYRAB|DNA repair and recombination protein|Pyrococcus abyssi (strain GE5 /

Query: 1 ERRIVSQLLT 10
+RRI+S+L T
Sbjct: 92 QRRIISKLKT 101




66|Sequence|326|335|SQLLTLMDGL

>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 SQLLTLMDGL 10
+QLLTLMDGL
Sbjct: 301 AQLLTLMDGL 310


Query: 1 SQLLTLMDGL 10
+QLLT +DG+
Sbjct: 575 NQLLTELDGM 584


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SQLLTLMDGL 10
+QLLTLMDG+
Sbjct: 312 AQLLTLMDGM 321


Query: 1 SQLLTLMDGL 10
+QLLT +DG+
Sbjct: 590 NQLLTSLDGI 599


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 SQLLTLMDGL 10
+QLLT+MDGL
Sbjct: 311 AQLLTMMDGL 320


Query: 1 SQLLTLMDGL 10
+QLLT +DGL
Sbjct: 585 NQLLTELDGL 594


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SQLLTLMDGL 10
+QLLTLMDG+
Sbjct: 334 AQLLTLMDGI 343


Query: 1 SQLLTLMDGL 10
+QLL MDG+
Sbjct: 610 NQLLAEMDGI 619


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SQLLTLMDGL 10
+QLL LMDGL
Sbjct: 304 AQLLALMDGL 313


Query: 1 SQLLTLMDGL 10
SQLLT +DGL
Sbjct: 578 SQLLTELDGL 587


>sp|FOLD_METAC|BIFUNCTIONAL protein FolD|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 QLLTLMDGL 10
+LLTL+D L
Sbjct: 83 ELLTLIDSL 91




67|Sequence|331|340|LMDGLKQRAH

>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LMDGLKQRAH 10
LMDG+K+R H
Sbjct: 317 LMDGMKERGH 326


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 LMDGLKQRAH 10
LMDGLK R
Sbjct: 306 LMDGLKGRGQ 315


>sp|XERA_METTH|TYROSINE recombinase XerA|Methanothermobacter thermautotrophicus (strain

Query: 1 LMDGLKQRAH 10
LMD LK+R H
Sbjct: 210 LMDYLKRRIH 219


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LMDGLKQRA 9
LMDG+K R
Sbjct: 339 LMDGIKGRG 347


>sp|NPD_METKA|NAD-DEPENDENT protein deacylase|Methanopyrus kandleri (strain AV19 /

Query: 2 MDGLKQRA 9
+DGL QRA
Sbjct: 101 VDGLHQRA 108


>sp|NPD2_PYRAE|NAD-DEPENDENT protein deacylase 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 MDGLKQRA 9
+DGL QRA
Sbjct: 98 VDGLHQRA 105


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LMDGLKQRA 9
LMDGL+ R
Sbjct: 309 LMDGLEARG 317


>sp|Y1815_PYRHO|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus horikoshii (strain

Query: 1 LMDGLKQRAH 10
++DGL R H
Sbjct: 68 IVDGLNTREH 77


>sp|RS4E_META3|SMALL ribosomal subunit protein eS4|Methanococcus aeolicus (strain ATCC

Query: 1 LMDGLKQRAH 10
L+DG+K++ H
Sbjct: 72 LVDGVKRKDH 81


>sp|PYRB_METMJ|ASPARTATE carbamoyltransferase catalytic subunit|Methanoculleus marisnigri

Query: 1 LMDGLKQR 8
L+DG+K+R
Sbjct: 246 LLDGVKER 253


>sp|HEM1_NATPD|GLUTAMYL-TRNA reductase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 DGLKQRAH 10
DGL +R H
Sbjct: 363 DGLSEREH 370


>sp|RS4E_METMP|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 LMDGLKQRAH 10
L+DGLK++ +
Sbjct: 72 LIDGLKRKEY 81


>sp|RS4E_METM7|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 LMDGLKQRAH 10
L+DGLK++ +
Sbjct: 72 LIDGLKRKEY 81


>sp|RS4E_METM6|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 LMDGLKQRAH 10
L+DGLK++ +
Sbjct: 72 LIDGLKRKEY 81


>sp|RS4E_METM5|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 LMDGLKQRAH 10
L+DGLK++ +
Sbjct: 72 LIDGLKRKEY 81




68|Sequence|336|345|KQRAHVIVMA

>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KQRAHVIVMA 10
K+R HVIV+
Sbjct: 322 KERGHVIVIG 331


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KQRAHVIVMA 10
KQR HV+++
Sbjct: 50 KQRRHVLLIG 59


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 1 KQRAHVIVMA 10
KQR HV+++
Sbjct: 60 KQRRHVLLIG 69




69|Sequence|341|350|VIVMAATNRP

>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VIVMAATNRP 10
VIV+AATNRP
Sbjct: 319 VIVIAATNRP 328


Query: 1 VIVMAATNRP 10
V+V+AATNRP
Sbjct: 593 VVVIAATNRP 602


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 VIVMAATNRP 10
V+V+AATNRP
Sbjct: 590 VVVIAATNRP 599


Query: 1 VIVMAATNRP 10
V+V+ ATNRP
Sbjct: 316 VVVIGATNRP 325


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 VIVMAATNRP 10
V+V+AATNRP
Sbjct: 600 VMVIAATNRP 609


Query: 1 VIVMAATNR 9
VIV+AATNR
Sbjct: 326 VIVIAATNR 334


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VIVMAATNRP 10
V+++AATNRP
Sbjct: 625 VVIIAATNRP 634


Query: 1 VIVMAATNRP 10
VIV+ ATNRP
Sbjct: 349 VIVIGATNRP 358


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VIVMAATNRP 10
V+V+ ATNRP
Sbjct: 605 VVVIGATNRP 614


Query: 1 VIVMAATNR 9
VIV+ ATNR
Sbjct: 327 VIVIGATNR 335


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VIVMAATNRP 10
V V+AATNRP
Sbjct: 277 VKVIAATNRP 286


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 VIVMAATNRP 10
V V+AATNRP
Sbjct: 277 VKVIAATNRP 286


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VIVMAATNRP 10
V V+AATNRP
Sbjct: 280 VKVIAATNRP 289


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 VIVMAATNRP 10
V ++AATNRP
Sbjct: 288 VKIIAATNRP 297


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VIVMAATNRP 10
V ++AATNRP
Sbjct: 288 VKIIAATNRP 297


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 VIVMAATNRP 10
V ++AATNRP
Sbjct: 288 VKIIAATNRP 297


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 1 VIVMAATNRP 10
V ++AATNRP
Sbjct: 288 VKIIAATNRP 297


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VIVMAATNRP 10
V V+AATNRP
Sbjct: 278 VKVIAATNRP 287


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VIVMAATNRP 10
V V+AATNRP
Sbjct: 278 VKVIAATNRP 287


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VIVMAATNRP 10
V ++AATNRP
Sbjct: 288 VKIIAATNRP 297


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 1 VIVMAATNRP 10
V ++AATNRP
Sbjct: 279 VKIIAATNRP 288


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 1 VIVMAATNRP 10
V ++AATNRP
Sbjct: 299 VRILAATNRP 308


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 VIVMAATNRP 10
V ++AATNRP
Sbjct: 291 VGIVAATNRP 300


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VIVMAATNRP 10
V+ +AATN P
Sbjct: 258 VVTIAATNNP 267


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 VMAATNRP 10
++AATNRP
Sbjct: 301 IIAATNRP 308


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VMAATNRP 10
++AATNRP
Sbjct: 301 IIAATNRP 308




70|Sequence|346|355|ATNRPNSIDP

>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 ATNRPNSIDP 10
ATNRPN++DP
Sbjct: 321 ATNRPNALDP 330


Query: 1 ATNRPNSIDP 10
ATNRP+ IDP
Sbjct: 595 ATNRPDIIDP 604


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ATNRPNSIDP 10
ATNRP++IDP
Sbjct: 324 ATNRPDAIDP 333


Query: 1 ATNRPNSIDP 10
ATNRP+ IDP
Sbjct: 598 ATNRPDMIDP 607


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ATNRPNSIDP 10
ATNRP++IDP
Sbjct: 354 ATNRPDAIDP 363


Query: 1 ATNRPNSIDP 10
ATNRP+ +DP
Sbjct: 630 ATNRPDILDP 639


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ATNRPNSIDP 10
ATNRP+ +DP
Sbjct: 304 ATNRPDVLDP 313


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ATNRPNSIDP 10
ATNRP+ +DP
Sbjct: 304 ATNRPDVLDP 313


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 1 ATNRPNSIDP 10
ATNRP+ +DP
Sbjct: 284 ATNRPDILDP 293


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ATNRPNSIDP 10
ATNRP+ +DP
Sbjct: 285 ATNRPDILDP 294


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ATNRPNSIDP 10
ATNRP+ +DP
Sbjct: 282 ATNRPDILDP 291


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 ATNRPNSIDP 10
ATNRP+ +DP
Sbjct: 282 ATNRPDILDP 291


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 ATNRPNSIDP 10
ATNRP+ +DP
Sbjct: 296 ATNRPDILDP 305


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 ATNRPNSIDP 10
ATNRP+ +DP
Sbjct: 283 ATNRPDILDP 292


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ATNRPNSIDP 10
ATNRP+ +DP
Sbjct: 283 ATNRPDILDP 292


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ATNRPNSIDP 10
ATNRP+ +DP
Sbjct: 293 ATNRPDILDP 302


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 ATNRPNSIDP 10
ATNRP+ +DP
Sbjct: 293 ATNRPDILDP 302


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ATNRPNSIDP 10
ATNRP+ +DP
Sbjct: 293 ATNRPDILDP 302


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 ATNRPNSIDP 10
ATNRP+ +DP
Sbjct: 293 ATNRPDILDP 302


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 1 ATNRPNSIDP 10
ATNRP+ +DP
Sbjct: 293 ATNRPDILDP 302


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ATNRPNSIDP 10
ATNRP+ +DP
Sbjct: 315 ATNRPDILDP 324


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 ATNRPNSIDP 10
ATNRP+ IDP
Sbjct: 605 ATNRPDIIDP 614


Query: 1 ATNRPNSIDP 10
ATNR +++DP
Sbjct: 331 ATNRVDAVDP 340


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 1 ATNRPNSIDP 10
ATNRP+ +DP
Sbjct: 304 ATNRPDILDP 313


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ATNRPNSIDP 10
ATNRP+ +DP
Sbjct: 610 ATNRPDIMDP 619


Query: 1 ATNRPNSIDP 10
ATNR ++IDP
Sbjct: 332 ATNRIDAIDP 341


>sp|TRUA_PYRAR|TRNA pseudouridine synthase A|Pyrobaculum arsenaticum (strain DSM

Query: 2 TNRPNSIDP 10
T PNS++P
Sbjct: 18 TGHPNSLEP 26


>sp|TRUA_PYRAE|TRNA pseudouridine synthase A|Pyrobaculum aerophilum (strain ATCC

Query: 2 TNRPNSIDP 10
T PNS++P
Sbjct: 18 TGHPNSLEP 26


>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC

Query: 3 NRPNSIDP 10
N P++IDP
Sbjct: 85 NHPSAIDP 92


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 2 TNRPNSID 9
+N PNS+D
Sbjct: 187 SNEPNSLD 194


>sp|PURL_METS5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Metallosphaera sedula (strain ATCC 51363

Query: 3 NRPNSIDP 10
N P++IDP
Sbjct: 85 NHPSAIDP 92


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 ATNRPNSIDP 10
ATNR + +DP
Sbjct: 324 ATNRKDILDP 333


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ATNRPNSIDP 10
ATN P +DP
Sbjct: 263 ATNNPAMLDP 272


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 NRPNSIDP 10
N P++IDP
Sbjct: 85 NHPSAIDP 92


>sp|PURL_PYRAR|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 NRPNSIDP 10
N P+++DP
Sbjct: 81 NHPSAVDP 88


>sp|AMPPA_META3|AMP phosphorylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 RPNSIDP 10
RP SIDP
Sbjct: 252 RPLSIDP 258


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ATNRPNSIDP 10
ATNR + IDP
Sbjct: 284 ATNRLDLIDP 293


>sp|AMPPA_METM6|AMP phosphorylase|Methanococcus maripaludis (strain C6 /

Query: 4 RPNSIDP 10
RP SIDP
Sbjct: 253 RPVSIDP 259


>sp|AMPPA_METM7|AMP phosphorylase|Methanococcus maripaludis (strain C7 /

Query: 4 RPNSIDP 10
RP SIDP
Sbjct: 253 RPVSIDP 259


>sp|AMPPA_METVS|AMP phosphorylase|Methanococcus vannielii (strain ATCC 35089

Query: 4 RPNSIDP 10
RP SIDP
Sbjct: 253 RPVSIDP 259


>sp|PURL_SACI7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.G.57.14

Query: 3 NRPNSIDP 10
N P++IDP
Sbjct: 85 NHPSAIDP 92


>sp|PURL_SACI2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 NRPNSIDP 10
N P++IDP
Sbjct: 85 NHPSAIDP 92


>sp|PURL_SACI1|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.N.15.51

Query: 3 NRPNSIDP 10
N P++IDP
Sbjct: 85 NHPSAIDP 92


>sp|PURL_PYRNV|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 NRPNSIDP 10
N P+++DP
Sbjct: 81 NHPSAVDP 88


>sp|PURL_PYRCJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 NRPNSIDP 10
N P+++DP
Sbjct: 81 NHPSAVDP 88


>sp|AMPPA_METMP|AMP phosphorylase|Methanococcus maripaludis (strain DSM 14266

Query: 4 RPNSIDP 10
RP SIDP
Sbjct: 253 RPVSIDP 259


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 3 NRPNSIDP 10
N P++IDP
Sbjct: 85 NHPSAIDP 92


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 3 NRPNSIDP 10
N P++IDP
Sbjct: 85 NHPSAIDP 92


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 3 NRPNSIDP 10
N P++IDP
Sbjct: 85 NHPSAIDP 92


>sp|AMPPA_METM5|AMP phosphorylase|Methanococcus maripaludis (strain C5 /

Query: 4 RPNSIDP 10
RP SIDP
Sbjct: 253 RPVSIDP 259


>sp|PURL_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus solfataricus (strain ATCC

Query: 3 NRPNSIDP 10
N P++IDP
Sbjct: 85 NHPSAIDP 92


>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 3 NRPNSIDP 10
N P+++DP
Sbjct: 81 NHPSAVDP 88


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 NRPNSIDP 10
N P+++DP
Sbjct: 81 NHPSAVDP 88


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ATNRPNSIDP 10
ATNR + +DP
Sbjct: 286 ATNRIDILDP 295


>sp|PURL_IGNH4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 NRPNSIDP 10
N P+++DP
Sbjct: 78 NHPSAVDP 85


>sp|PURL_CALMQ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Caldivirga maquilingensis (strain ATCC

Query: 3 NRPNSIDP 10
N P+++DP
Sbjct: 80 NHPSAVDP 87


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 ATNRPNSIDP 10
ATNR + +DP
Sbjct: 279 ATNRIDILDP 288


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 ATNRPNSIDP 10
ATNR + +DP
Sbjct: 279 ATNRIDILDP 288


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 ATNRPNSIDP 10
ATNR + +DP
Sbjct: 279 ATNRIDILDP 288


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 ATNRPNSIDP 10
ATNR + +DP
Sbjct: 279 ATNRIDILDP 288


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 ATNRPNSIDP 10
ATNR + +DP
Sbjct: 279 ATNRIDILDP 288


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 ATNRPNSIDP 10
ATNR + +DP
Sbjct: 279 ATNRIDILDP 288


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ATNRPNSIDP 10
ATNR + +DP
Sbjct: 279 ATNRLDILDP 288


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ATNRPNSIDP 10
ATNR + +DP
Sbjct: 279 ATNRIDILDP 288


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 1 ATNRPNSIDP 10
ATNR + +DP
Sbjct: 295 ATNRFDMLDP 304




71|Sequence|351|360|NSIDPALRRF

>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 NSIDPALRR 9
N++DPALRR
Sbjct: 326 NALDPALRR 334


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NSIDPALRR 9
++IDPALRR
Sbjct: 329 DAIDPALRR 337


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NSIDPALRR 9
++IDPALRR
Sbjct: 359 DAIDPALRR 367


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NSIDPALRR 9
++IDPALRR
Sbjct: 337 DAIDPALRR 345


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 NSIDPALRR 9
+++DPALRR
Sbjct: 336 DAVDPALRR 344


>sp|RFCL_METMP|REPLICATION factor C large subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 NSIDPALRR 9
NSI P LRR
Sbjct: 162 NSIPPVLRR 170


>sp|NEP1_THEAC|RIBOSOMAL RNA small subunit methyltransferase|Thermoplasma acidophilum

Query: 4 DPALRRF 10
DPA+RRF
Sbjct: 21 DPAIRRF 27


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 SIDPALRRF 10
+IDPA RF
Sbjct: 148 TIDPAFERF 156


>sp|RFCL_META3|REPLICATION factor C large subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 NSIDPALRR 9
NSI P LRR
Sbjct: 161 NSIVPVLRR 169


>sp|RNZ_PYRCJ|RIBONUCLEASE Z|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 DPALRRF 10
DPA RRF
Sbjct: 177 DPAHRRF 183


>sp|SECY_PYRAB|PROTEIN translocase subunit SecY|Pyrococcus abyssi (strain GE5 /

Query: 5 PALRRF 10
PALRRF
Sbjct: 460 PALRRF 465


>sp|MTNA_AERPE|PUTATIVE methylthioribose-1-phosphate isomerase|Aeropyrum pernix (strain

Query: 3 IDPALRR 9
IDP+LRR
Sbjct: 4 IDPSLRR 10


>sp|IF2B_PYRCJ|TRANSLATION initiation factor 2 subunit|Pyrobaculum calidifontis (strain DSM

Query: 1 NSIDPALRR 9
NSID LRR
Sbjct: 105 NSIDTELRR 113


>sp|RFCL_METM6|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 NSIDPALRR 9
NSI P LR+
Sbjct: 162 NSIPPVLRK 170


>sp|APE2_SACS2|LEUCYL aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NSIDPALRRF 10
NS+D L RF
Sbjct: 647 NSVDELLERF 656


>sp|TRUA_PYRCJ|TRNA pseudouridine synthase A|Pyrobaculum calidifontis (strain DSM

Query: 1 NSIDPALRR 9
NS++ ALRR
Sbjct: 22 NSVEAALRR 30


>sp|RFCL_METVS|REPLICATION factor C large subunit|Methanococcus vannielii (strain ATCC 35089

Query: 1 NSIDPALRR 9
NSI P LR+
Sbjct: 162 NSIPPVLRK 170


>sp|RFCL_METM7|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 NSIDPALRR 9
NSI P LR+
Sbjct: 162 NSIPPVLRK 170


>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 NSIDPALRR 9
NSI P LR+
Sbjct: 162 NSIPPVLRK 170


>sp|IF2B_PYRNV|TRANSLATION initiation factor 2 subunit|Pyrobaculum neutrophilum (strain DSM

Query: 1 NSIDPALRR 9
NSID LRR
Sbjct: 105 NSIDTELRR 113


>sp|RS7_PYRAE|SMALL ribosomal subunit protein uS7|Pyrobaculum aerophilum (strain ATCC

Query: 4 DPALRRF 10
DP LRR+
Sbjct: 54 DPGLRRY 60


>sp|RFRNP_HYPBU|RNA-FREE ribonuclease P|Hyperthermus butylicus (strain DSM 5456

Query: 2 SIDPALRRF 10
S+D A+RRF
Sbjct: 33 SLDEAVRRF 41


>sp|NEP1_THEVO|RIBOSOMAL RNA small subunit methyltransferase|Thermoplasma volcanium

Query: 4 DPALRRF 10
DP +RRF
Sbjct: 21 DPGVRRF 27


>sp|TRUA_PYRIL|TRNA pseudouridine synthase A|Pyrobaculum islandicum (strain DSM 4184

Query: 2 SIDPALRR 9
S++PAL+R
Sbjct: 23 SLEPALKR 30


>sp|RS7_PYRIL|SMALL ribosomal subunit protein uS7|Pyrobaculum islandicum (strain DSM

Query: 4 DPALRRF 10
DP LRR+
Sbjct: 55 DPGLRRY 61


>sp|RS7_CALMQ|SMALL ribosomal subunit protein uS7|Caldivirga maquilingensis (strain

Query: 4 DPALRRF 10
DP LRR+
Sbjct: 55 DPGLRRY 61


>sp|RS7_PYRNV|SMALL ribosomal subunit protein uS7|Pyrobaculum neutrophilum (strain

Query: 4 DPALRRF 10
DP LRR+
Sbjct: 55 DPGLRRY 61




72|Sequence|356|365|ALRRFGRFDR

>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 ALRRFGRFDR 10
ALRR GRFDR
Sbjct: 331 ALRRPGRFDR 340


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ALRRFGRFDR 10
ALRR GRFDR
Sbjct: 364 ALRRPGRFDR 373


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 ALRRFGRFDR 10
ALRR GRFDR
Sbjct: 341 ALRRPGRFDR 350


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ALRRFGRFDR 10
ALRR GRFDR
Sbjct: 334 ALRRPGRFDR 343


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ALRRFGRFDR 10
ALRR GRFDR
Sbjct: 342 ALRRPGRFDR 351


>sp|IPK_THEAC|ISOPENTENYL phosphate kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ALRRFGRFD 9
ALR GRFD
Sbjct: 102 ALRYDGRFD 110


>sp|CAS8A_METJA|CRISPR-ASSOCIATED protein Cas8a2/Csa4|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ALRRFGRFD 9
A+R FG +D
Sbjct: 290 AIRSFGEYD 298


>sp|SURE_THEGJ|5'-NUCLEOTIDASE SurE|Thermococcus gammatolerans (strain DSM 15229

Query: 1 ALRRFGRFD 9
A+ RFG FD
Sbjct: 78 AIARFGSFD 86


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ALRRFGRFDR 10
AL FG FD+
Sbjct: 462 ALSHFGLFDK 471


>sp|CAS1A_PYRAE|CRISPR-ASSOCIATED endonuclease Cas1 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ALRRFGRFDR 10
ALRR G++ R
Sbjct: 117 ALRRLGQWKR 126


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ALRRFGRFDR 10
AL FG FD+
Sbjct: 462 ALTHFGLFDK 471


>sp|ANTRA_HALVD|PROBABLE anion import ATP-binding protein|Haloferax volcanii (strain ATCC

Query: 1 ALRRFGRFDR 10
ALR G FD+
Sbjct: 166 ALRTVGMFDK 175


>sp|UVRC_HALMA|UVRABC system protein C|Haloarcula marismortui (strain ATCC 43049

Query: 2 LRRFGRFD 9
LRRFG D
Sbjct: 545 LRRFGSVD 552




73|Sequence|361|370|GRFDREVDIG

>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GRFDREVDIG 10
GRFDRE++IG
Sbjct: 347 GRFDREIEIG 356


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GRFDREVDIG 10
GRFDRE++IG
Sbjct: 339 GRFDREIEIG 348


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 GRFDREVDIG 10
GRFDRE++IG
Sbjct: 346 GRFDREIEIG 355


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GRFDREVDI 9
GRFDRE++I
Sbjct: 369 GRFDREIEI 377


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 GRFDREVDIG 10
GRFDRE+ IG
Sbjct: 336 GRFDREIVIG 345


>sp|HTR9_HALSA|HALOBACTERIAL transducer protein 9|Halobacterium salinarum (strain ATCC 700922

Query: 1 GRFDREVDIG 10
GRFD VDI
Sbjct: 165 GRFDATVDIA 174


>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain ATCC

Query: 2 RFDREVDI 9
+FDRE+D+
Sbjct: 709 KFDREIDL 716


>sp|DGGGP_HALSA|DIGERANYLGERANYLGLYCERYL phosphate synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 FDREVD 8
FDREVD
Sbjct: 61 FDREVD 66


>sp|DGGGP_HALS3|DIGERANYLGERANYLGLYCERYL phosphate synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 FDREVD 8
FDREVD
Sbjct: 61 FDREVD 66


>sp|DGGGP_METTP|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 FDREVD 8
FDRE+D
Sbjct: 57 FDREID 62


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 GRFDREVDI 9
GRFDR + I
Sbjct: 339 GRFDRHIKI 347


>sp|RNZ_NATPD|RIBONUCLEASE Z|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GRFDRE 6
GRFDRE
Sbjct: 155 GRFDRE 160


>sp|VORA_PYRAB|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus abyssi (strain GE5 /

Query: 1 GRFDREVD 8
G+ DREV+
Sbjct: 382 GKLDREVE 389


>sp|RNZ_HALVD|RIBONUCLEASE Z|Haloferax volcanii (strain ATCC 29605

Query: 1 GRFDRE 6
GRFDRE
Sbjct: 155 GRFDRE 160


>sp|MVK_METJA|MEVALONATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RFDREVDIG 10
+ DR VDIG
Sbjct: 256 KLDRIVDIG 264


>sp|Y961_METJA|MCM-LIKE protein MJ0961|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GRFDREVDI 9
GRFDR + +
Sbjct: 497 GRFDRNLTV 505


>sp|RF1_METS3|PEPTIDE chain release factor subunit|Methanobrevibacter smithii (strain

Query: 2 RFDREVDIG 10
RFDR +D+
Sbjct: 185 RFDRVIDLA 193


>sp|Y1120_ARCFU|UNCHARACTERIZED protein AF_1120|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RFDREV 7
RFDREV
Sbjct: 153 RFDREV 158


>sp|PGP2_SACS2|PHOSPHOGLYCOLATE phosphatase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GRFDREVDI 9
G F +EVDI
Sbjct: 224 GNFGKEVDI 232


>sp|PURP_PYRNV|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum neutrophilum (strain DSM

Query: 3 FDREVDIG 10
FDR +D+G
Sbjct: 316 FDRPMDMG 323


>sp|RF1_METTH|PEPTIDE chain release factor subunit|Methanothermobacter thermautotrophicus

Query: 2 RFDREVDIG 10
RFDR +D+
Sbjct: 185 RFDRLIDLA 193


>sp|SYS2_METKA|TYPE-2 serine--tRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 RFDREV 7
RFDREV
Sbjct: 109 RFDREV 114


>sp|PURP_PYRIL|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 FDREVDIG 10
FDR +D+G
Sbjct: 305 FDRPMDMG 312


>sp|SYDND_METBF|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GRFDREVDIG 10
G FDR +IG
Sbjct: 207 GGFDRVFEIG 216




74|Sequence|366|375|EVDIGIPDAT

>sp|ACKA_METMA|ACETATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EVDIGIPDAT 10
E+DI PDAT
Sbjct: 365 EIDISTPDAT 374


>sp|ACKA_METMZ|ACETATE kinase|Methanosarcina mazei (Methanosarcina frisia)

Query: 1 EVDIGIPDAT 10
E+DI PDAT
Sbjct: 365 EIDISTPDAT 374


>sp|RL11_METVS|LARGE ribosomal subunit protein uL11|Methanococcus vannielii (strain

Query: 1 EVDIGIPDAT 10
EV++GIP A+
Sbjct: 65 EVEVGIPPAS 74


>sp|RL11_NITMS|LARGE ribosomal subunit protein uL11|Nitrosopumilus maritimus (strain

Query: 1 EVDIGIPDA 9
E++IGIP A
Sbjct: 65 EIEIGIPSA 73


>sp|RL11_METM7|LARGE ribosomal subunit protein uL11|Methanococcus maripaludis (strain

Query: 1 EVDIGIPDAT 10
EV++GIP A+
Sbjct: 65 EVEVGIPPAS 74


>sp|RL11_METM6|LARGE ribosomal subunit protein uL11|Methanococcus maripaludis (strain

Query: 1 EVDIGIPDAT 10
EV++GIP A+
Sbjct: 65 EVEVGIPPAS 74


>sp|RL11_METMP|LARGE ribosomal subunit protein uL11|Methanococcus maripaludis (strain

Query: 1 EVDIGIPDAT 10
EV++GIP A+
Sbjct: 65 EVEVGIPPAS 74


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EVDIGIPD 8
E++IG+PD
Sbjct: 352 EIEIGVPD 359


>sp|RL11_METM5|LARGE ribosomal subunit protein uL11|Methanococcus maripaludis (strain

Query: 1 EVDIGIPDAT 10
EV++GIP A+
Sbjct: 65 EVEVGIPPAS 74


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EVDIGIPD 8
E++IG+PD
Sbjct: 344 EIEIGVPD 351


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 EVDIGIPD 8
E++IG+PD
Sbjct: 351 EIEIGVPD 358


>sp|ACKA_METAC|ACETATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EVDIGIPDA 9
E+DI PDA
Sbjct: 365 EIDISTPDA 373


>sp|ACKA_METTE|ACETATE kinase|Methanosarcina thermophila

Query: 1 EVDIGIPDA 9
E+DI PDA
Sbjct: 365 EIDISTPDA 373


>sp|QUEC_AERPE|7-CYANO-7-DEAZAGUANINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 DIGIPDAT 10
D G+PD T
Sbjct: 235 DAGLPDCT 242


>sp|NCPP_THEKO|PROBABLE inosine/xanthosine triphosphatase|Thermococcus kodakarensis

Query: 1 EVDIGIPD 8
EVD G+PD
Sbjct: 33 EVDSGVPD 40


>sp|ACKA_METBF|ACETATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EVDIGIPDAT 10
E+DI PD++
Sbjct: 365 EIDISTPDSS 374


>sp|RLME_HALLT|RIBOSOMAL RNA large subunit methyltransferase|Halorubrum lacusprofundi

Query: 2 VDIGIPDA 9
VD+G PD+
Sbjct: 255 VDVGTPDS 262


>sp|TRM56_METLZ|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanocorpusculum labreanum

Query: 1 EVDIGIPDA 9
E+D+ PDA
Sbjct: 153 ELDLAFPDA 161


>sp|SYG_PYRHO|GLYCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VDIGIPD 8
+DIGIP+
Sbjct: 284 LDIGIPE 290


>sp|RS2_METTP|SMALL ribosomal subunit protein uS2|Methanothrix thermoacetophila (strain

Query: 2 VDIGIP 7
VDIGIP
Sbjct: 141 VDIGIP 146


>sp|SYG_THEGJ|GLYCINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 VDIGIPD 8
+DIGIP+
Sbjct: 284 LDIGIPE 290


>sp|VHTG_METMA|F420 non-reducing hydrogenase II small|Methanosarcina mazei (strain ATCC

Query: 2 VDIGIPDAT 10
VD G PDA+
Sbjct: 334 VDPGFPDAS 342


>sp|SYG_THEKO|GLYCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VDIGIPD 8
+DIGIP+
Sbjct: 284 LDIGIPE 290


>sp|SYG_PYRFU|GLYCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VDIGIPD 8
+DIGIP+
Sbjct: 282 LDIGIPE 288


>sp|SYG_PYRAB|GLYCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 VDIGIPD 8
+DIGIP+
Sbjct: 284 LDIGIPE 290


>sp|VHOG_METMA|F420 non-reducing hydrogenase I small|Methanosarcina mazei (strain ATCC

Query: 2 VDIGIPDAT 10
VD G PDA+
Sbjct: 334 VDPGFPDAS 342


>sp|ASSY_ARCFU|ARGININOSUCCINATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VDIGIPDA 9
VDIG P+A
Sbjct: 34 VDIGQPEA 41


>sp|QUEC_PYRAE|7-CYANO-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VDIGIPDAT 10
++ G+PD T
Sbjct: 236 IEAGLPDCT 244


>sp|NNR_ARCFU|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Archaeoglobus fulgidus (strain

Query: 3 DIGIPDA 9
DIGIP++
Sbjct: 192 DIGIPES 198


>sp|SYG_METTH|GLYCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 VDIGIPD 8
+DIGIP+
Sbjct: 283 MDIGIPE 289




75|Sequence|371|380|IPDATGRLEI

>sp|LIPA_METAR|LIPOYL synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 IPDATGRLEI 10
IPD TGRL++
Sbjct: 140 IPDFTGRLDL 149


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 IPDATGRLEI 10
+PD GRLEI
Sbjct: 318 MPDEDGRLEI 327


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IPDATGRLEI 10
+PD GRLEI
Sbjct: 318 MPDEDGRLEI 327


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IPDATGRLEI 10
+PD GRLEI
Sbjct: 308 LPDYQGRLEI 317


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PDATGRLEI 10
PD GRLEI
Sbjct: 341 PDEKGRLEI 349


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IPDATGRLEI 10
+PD GRLEI
Sbjct: 307 LPDFEGRLEI 316


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 IPDATGRLEI 10
+PD GRLEI
Sbjct: 307 LPDFEGRLEI 316


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IPDATGRLEI 10
+PD GRLEI
Sbjct: 310 LPDFEGRLEI 319


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 IPDATGRLEI 10
+PD GRLEI
Sbjct: 308 LPDFRGRLEI 317


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 2 PDATGRLEI 10
PD GRLEI
Sbjct: 319 PDEDGRLEI 327


>sp|SYDND_HALSA|ASPARTATE--TRNA(ASP/ASN) ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 IPDATGRLEI 10
+ DATGRL++
Sbjct: 39 VRDATGRLQV 48


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 IPDATGRLEI 10
+PD GRL+I
Sbjct: 318 MPDEDGRLDI 327


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 1 IPDATGRLEI 10
+PD GRL+I
Sbjct: 318 MPDEDGRLDI 327


>sp|AATF_METJA|A-TYPE ATP synthase subunit F|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IPDATGRLE 9
IPD G+LE
Sbjct: 72 IPDKHGKLE 80


>sp|IF2A_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 IPDATGRLEI 10
IP+ TG++E+
Sbjct: 198 IPEDTGKVEL 207


>sp|DAPAT_METTH|LL-DIAMINOPIMELATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 IPDATGRL 8
+PD++GR+
Sbjct: 269 VPDSSGRM 276


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IPDATGRLEI 10
+PD GR EI
Sbjct: 357 VPDRNGRKEI 366


>sp|TDXH1_THEAC|PEROXIREDOXIN 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IPDATGRLE 9
+ DATGRL+
Sbjct: 193 VKDATGRLK 201


>sp|IF2P_METAC|PROBABLE translation initiation factor IF-2|Methanosarcina acetivorans

Query: 2 PDATGRLE 9
PD GRLE
Sbjct: 163 PDVQGRLE 170


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 1 IPDATGRLEI 10
+PD GRL I
Sbjct: 348 LPDEEGRLSI 357


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 2 PDATGRL 8
PDA GRL
Sbjct: 142 PDAIGRL 148


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 IPDATGRLEI 10
+PD GRL I
Sbjct: 323 LPDHQGRLAI 332


>sp|AROE_NATPD|SHIKIMATE dehydrogenase (NADP(+))|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IPDATGR 7
+PDATG
Sbjct: 158 VPDATGH 164


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 IPDATGRLEI 10
+PD RLE+
Sbjct: 403 VPDLAPRLEV 412


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IPDATGRLE 9
+PD T +LE
Sbjct: 522 LPDMTAKLE 530


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 2 PDATGRLE 9
PD +GR+E
Sbjct: 711 PDESGRVE 718


>sp|UVRC_METTH|UVRABC system protein C|Methanothermobacter thermautotrophicus (strain

Query: 1 IPDATG 6
+PDATG
Sbjct: 10 LPDATG 15


>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 1 IPDATGRL 8
+PDA GR+
Sbjct: 86 VPDAFGRV 93


>sp|IF2G_NATPD|TRANSLATION initiation factor 2 subunit|Natronomonas pharaonis (strain ATCC

Query: 2 PDATGRLEI 10
PDA RL++
Sbjct: 206 PDADARLQV 214


>sp|TRM56_METAC|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosarcina acetivorans

Query: 1 IPDATGRLE 9
+PD TG L+
Sbjct: 91 LPDVTGELK 99




76|Sequence|376|385|GRLEILQIHT

>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 GRLEILQIHT 10
GRLEIL+IHT
Sbjct: 323 GRLEILKIHT 332


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GRLEILQIHT 10
GRLEIL+IHT
Sbjct: 323 GRLEILKIHT 332


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GRLEILQIHT 10
GRLEIL+IHT
Sbjct: 345 GRLEILKIHT 354


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 GRLEILQIHT 10
GR EILQIHT
Sbjct: 351 GRKEILQIHT 360


Query: 1 GRLEILQIHT 10
RL+I +IHT
Sbjct: 625 ARLDIFKIHT 634


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 GRLEILQIHT 10
GRL+IL+IHT
Sbjct: 323 GRLDILKIHT 332


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 1 GRLEILQIHT 10
GRL+IL+IHT
Sbjct: 323 GRLDILKIHT 332


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GRLEILQIHT 10
GRLEIL++HT
Sbjct: 315 GRLEILKVHT 324


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GRLEILQIHT 10
GRLEIL++HT
Sbjct: 312 GRLEILKVHT 321


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 GRLEILQIHT 10
GRLEIL++HT
Sbjct: 312 GRLEILKVHT 321


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GRLEILQIHT 10
GRLEI +IHT
Sbjct: 323 GRLEIFKIHT 332


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GRLEILQIHT 10
GRLEIL++HT
Sbjct: 313 GRLEILKVHT 322


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GRLEILQIHT 10
GRLEIL++HT
Sbjct: 313 GRLEILKVHT 322


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GRLEILQIHT 10
GRLEIL IHT
Sbjct: 314 GRLEILGIHT 323


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GRLEILQIHT 10
GR +ILQ+HT
Sbjct: 384 GRKDILQVHT 393


Query: 1 GRLEILQIHT 10
R EIL++HT
Sbjct: 660 ARFEILKVHT 669


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GRLEILQIHT 10
GR EIL+IHT
Sbjct: 354 GRKEILEIHT 363


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 GRLEILQIHT 10
GR EIL+IHT
Sbjct: 361 GREEILKIHT 370


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GRLEILQIHT 10
GR EIL+IHT
Sbjct: 326 GRREILKIHT 335


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GRLEILQIHT 10
GRL IL+IHT
Sbjct: 328 GRLAILKIHT 337


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 1 GRLEILQIHT 10
GRL IL++HT
Sbjct: 353 GRLSILKVHT 362


>sp|K6PF_THELI|ADP-SPECIFIC phosphofructokinase|Thermococcus litoralis

Query: 3 LEILQIHT 10
LEILQ+HT
Sbjct: 337 LEILQVHT 344


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 2 RLEILQIHT 10
RLEIL+IHT
Sbjct: 315 RLEILKIHT 323


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GRLEILQIHT 10
GR EIL IHT
Sbjct: 362 GRKEILMIHT 371


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GRLEILQIHT 10
GR++I +IHT
Sbjct: 316 GRIQIFKIHT 325


>sp|K6PF_THEKO|ADP-SPECIFIC phosphofructokinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LEILQIHT 10
LE+LQIHT
Sbjct: 337 LELLQIHT 344


>sp|K6PF_METJA|BIFUNCTIONAL ADP-specific glucokinase/phosphofructokinase|Methanocaldococcus

Query: 3 LEILQIHT 10
LE++Q+HT
Sbjct: 342 LEVVQVHT 349


>sp|K6PF_PYRAB|ADP-SPECIFIC phosphofructokinase|Pyrococcus abyssi (strain GE5 /

Query: 3 LEILQIHT 10
EILQ+HT
Sbjct: 330 FEILQVHT 337


>sp|K6PF_THEZI|ADP-SPECIFIC phosphofructokinase|Thermococcus zilligii

Query: 3 LEILQIHT 10
L++LQIHT
Sbjct: 337 LDVLQIHT 344


>sp|K6PF_PYRHO|ADP-SPECIFIC phosphofructokinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LEILQIHT 10
EILQ+HT
Sbjct: 329 FEILQVHT 336


>sp|K6PF_PYRFU|ADP-SPECIFIC phosphofructokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LEILQIHT 10
EILQ+HT
Sbjct: 332 FEILQVHT 339


>sp|IF2G_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 GRLEILQIHT 10
GR+E +++HT
Sbjct: 266 GRVEYVRLHT 275


>sp|CSX1_METJA|CRISPR system endoribonuclease Csx1|Methanocaldococcus jannaschii (strain

Query: 4 EILQIHT 10
EIL IHT
Sbjct: 180 EILNIHT 186


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GRLEILQIH 9
GR+ IL IH
Sbjct: 328 GRVSILNIH 336


>sp|PMK_SACS2|PHOSPHOMEVALONATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GRLEILQIH 9
G+L++ +IH
Sbjct: 120 GKLDLFEIH 128




77|Sequence|381|390|LQIHTKNMKL

>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 LQIHTKNMKL 10
LQIHT+NM L
Sbjct: 356 LQIHTRNMPL 365


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LQIHTKNMKL 10
L++HTKNM L
Sbjct: 645 LKVHTKNMPL 654


Query: 1 LQIHTKNMKL 10
L IHT+NM L
Sbjct: 367 LMIHTRNMPL 376


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LQIHTKNMKL 10
LQ+HT+NM +
Sbjct: 389 LQVHTRNMPI 398


Query: 1 LQIHTKNMKL 10
L++HTKN+ L
Sbjct: 665 LKVHTKNVPL 674


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LQIHTKNMKL 10
L++HT+ MKL
Sbjct: 320 LKVHTRRMKL 329


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LQIHTKNMKL 10
L++HT+ MKL
Sbjct: 317 LKVHTRRMKL 326


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 LQIHTKNMKL 10
L++HT+ MKL
Sbjct: 317 LKVHTRRMKL 326


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LQIHTKNMKL 10
+IHT+ MKL
Sbjct: 321 FKIHTRKMKL 330


>sp|G3P2_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LQIHTKNMKL 10
+ +HT NM+L
Sbjct: 220 MHVHTVNMEL 229


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 1 LQIHTKNMKL 10
+Q H KN+K+
Sbjct: 261 IQKHVKNLKI 270




78|Sequence|386|395|KNMKLADDVD

>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KNMKLADDVD 10
+ MKLA+DVD
Sbjct: 326 RKMKLAEDVD 335


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KNMKLADDVD 10
KNM LA DVD
Sbjct: 650 KNMPLAPDVD 659


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 KNMKLADDVD 10
+NM LA+DVD
Sbjct: 361 RNMPLAEDVD 370


>sp|SYK2_METAC|LYSINE--TRNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KNMKLADDVD 10
+NM L DDVD
Sbjct: 12 ENMPLPDDVD 21


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KNMKLADDVD 10
+NM + DDVD
Sbjct: 394 RNMPITDDVD 403


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 1 KNMKLADDVD 10
+ M LADDVD
Sbjct: 344 RKMNLADDVD 353


>sp|Y857_METTH|PROTEIN MTH_857|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KNMKLADDV 9
KN++L DD+
Sbjct: 30 KNLRLPDDL 38


>sp|CAPPA_SULTO|PHOSPHOENOLPYRUVATE carboxylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KNMKLADDV 9
+N+KL DD+
Sbjct: 156 ENVKLVDDI 164


>sp|GATE_PYRFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus furiosus (strain ATCC 43587

Query: 4 KLADDVD 10
KL+DDVD
Sbjct: 33 KLSDDVD 39


>sp|RL30_SULTO|LARGE ribosomal subunit protein uL30|Sulfurisphaera tokodaii (strain

Query: 2 NMKLADDV 9
N+K+ DD+
Sbjct: 78 NLKITDDI 85


>sp|GLYA_METTM|SERINE hydroxymethyltransferase|Methanothermobacter marburgensis (strain

Query: 4 KLADDVD 10
+LADD+D
Sbjct: 242 ELADDID 248


>sp|Y776_METJA|UNCHARACTERIZED protein MJ0776|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KLADDVD 10
KLAD+VD
Sbjct: 85 KLADEVD 91




79|Sequence|391|400|ADDVDLEQVA

>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ADDVDLEQV 9
+DD+DLE++
Sbjct: 61 SDDIDLEKI 69


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ADDVDLEQVA 10
A+DVDLE++A
Sbjct: 369 AEDVDLEELA 378


>sp|TBP_META3|TATA-BOX-BINDING protein|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 ADDVDLEQVA 10
DD+DLE VA
Sbjct: 17 GDDIDLEYVA 26


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 1 ADDVDLEQVA 10
ADDVDL ++A
Sbjct: 349 ADDVDLRKIA 358


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 ADDVDLEQVA 10
A+DVDL+++A
Sbjct: 369 AEDVDLQKLA 378


>sp|Y760_PYRHO|UPF0056 membrane protein PH0760|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DDVDLEQVA 10
+DV LE+VA
Sbjct: 104 EDVTLEEVA 112


>sp|Y1305_PYRAB|UPF0056 membrane protein PYRAB13050|Pyrococcus abyssi (strain GE5 /

Query: 2 DDVDLEQVA 10
+DV LE+VA
Sbjct: 104 EDVTLEEVA 112


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DDVDLEQVA 10
DDVDL+++A
Sbjct: 400 DDVDLDKLA 408


>sp|TFRA_METTM|FUMARATE reductase (CoM/CoB) subunit A|Methanothermobacter marburgensis

Query: 1 ADDVDLEQV 9
AD +D+EQV
Sbjct: 225 ADLIDMEQV 233


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 1 ADDVDLEQVA 10
ADDVDL+ +A
Sbjct: 342 ADDVDLDALA 351


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ADDVDLEQVA 10
A+DV+LE++A
Sbjct: 360 AEDVNLEEIA 369


>sp|AROC_HALLT|CHORISMATE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 ADDVDLEQV 9
ADDV EQ+
Sbjct: 166 ADDVSFEQI 174


>sp|GCH3_HALLT|GTP cyclohydrolase III|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 ADDVDLE 7
ADDVD+E
Sbjct: 209 ADDVDIE 215




80|Sequence|396|405|LEQVANETHG

>sp|HCP_METVS|HYDROXYLAMINE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LEQVANETHG 10
LEQ+ N+T G
Sbjct: 244 LEQLLNQTKG 253




81|Sequence|401|410|NETHGHVGAD

>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 NETHGHVGAD 10
++THG VGAD
Sbjct: 386 DDTHGFVGAD 395


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 3 THGHVGAD 10
THG VGAD
Sbjct: 378 THGFVGAD 385


Query: 2 ETHGHVGAD 10
+T G+ GAD
Sbjct: 651 KTEGYTGAD 659


>sp|RS4_ARCFU|SMALL ribosomal subunit protein uS4|Archaeoglobus fulgidus (strain ATCC

Query: 3 THGHVGAD 10
THGH+ D
Sbjct: 132 THGHIAVD 139


>sp|RS4_METBU|SMALL ribosomal subunit protein uS4|Methanococcoides burtonii (strain DSM

Query: 3 THGHVGAD 10
THGH+ D
Sbjct: 131 THGHIAID 138


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 THGHVGAD 10
T G+VGAD
Sbjct: 667 TEGYVGAD 674


Query: 3 THGHVGAD 10
T+G VGAD
Sbjct: 394 TYGFVGAD 401


>sp|HEM2_ARCFU|DELTA-AMINOLEVULINIC acid dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 THGHVG 8
THGH G
Sbjct: 126 THGHCG 131


>sp|RS4_THEPD|SMALL ribosomal subunit protein uS4|Thermofilum pendens (strain DSM 2475

Query: 3 THGHVGAD 10
THGH+ +
Sbjct: 127 THGHIAVN 134


>sp|RS4_SACS2|SMALL ribosomal subunit protein uS4|Saccharolobus solfataricus (strain

Query: 3 THGHVGAD 10
THGH+ +
Sbjct: 127 THGHIAVN 134


>sp|Y1355_METJA|UNCHARACTERIZED protein MJ1355|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 HGHVGAD 10
GHVG D
Sbjct: 428 QGHVGGD 434


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 THGHVGAD 10
T+G+ GAD
Sbjct: 411 TYGYTGAD 418


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 THGHVGAD 10
T+G VGAD
Sbjct: 381 TNGFVGAD 388


>sp|Y215_METTH|UNCHARACTERIZED protein MTH_215|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 NETHG 5
NETHG
Sbjct: 194 NETHG 198


>sp|HEM1_SULAC|GLUTAMYL-TRNA reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NETHG 5
NETHG
Sbjct: 75 NETHG 79


>sp|PYRF_ARCFU|OROTIDINE 5'-phosphate decarboxylase|Archaeoglobus fulgidus (strain ATCC

Query: 4 HGHVGAD 10
HG VG+D
Sbjct: 85 HGFVGSD 91


>sp|RS4_SULAC|SMALL ribosomal subunit protein uS4|Sulfolobus acidocaldarius (strain

Query: 3 THGHVG 8
THGH+
Sbjct: 127 THGHIA 132


>sp|RS4_METPE|SMALL ribosomal subunit protein uS4|Methanosphaerula palustris (strain

Query: 3 THGHVG 8
THGH+
Sbjct: 131 THGHIA 136


>sp|RS4_METLZ|SMALL ribosomal subunit protein uS4|Methanocorpusculum labreanum (strain

Query: 3 THGHVG 8
THGH+
Sbjct: 131 THGHIA 136


>sp|RS4_IGNH4|SMALL ribosomal subunit protein uS4|Ignicoccus hospitalis (strain KIN4/I

Query: 3 THGHVG 8
THGH+
Sbjct: 126 THGHIA 131


>sp|RS4_METHJ|SMALL ribosomal subunit protein uS4|Methanospirillum hungatei JF-1

Query: 3 THGHVG 8
THGH+
Sbjct: 131 THGHIA 136


>sp|RS4_METBF|SMALL ribosomal subunit protein uS4|Methanosarcina barkeri (strain Fusaro

Query: 3 THGHVG 8
THGH+
Sbjct: 134 THGHIA 139


>sp|DTDA_HALLT|D-AMINOACYL-TRNA deacylase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 GHVGAD 10
GHVGAD
Sbjct: 245 GHVGAD 250


>sp|DTDA_HALWD|D-AMINOACYL-TRNA deacylase|Haloquadratum walsbyi (strain DSM 16790

Query: 5 GHVGAD 10
GH+GAD
Sbjct: 211 GHIGAD 216


>sp|RS4_METMJ|SMALL ribosomal subunit protein uS4|Methanoculleus marisnigri (strain

Query: 3 THGHVG 8
THGH+
Sbjct: 131 THGHIA 136


>sp|RS4_METMA|SMALL ribosomal subunit protein uS4|Methanosarcina mazei (strain ATCC

Query: 3 THGHVG 8
THGH+
Sbjct: 135 THGHIA 140




82|Sequence|406|415|HVGADLAALC

>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 2 VGADLAALC 10
VGADLAALC
Sbjct: 382 VGADLAALC 390


Query: 1 HVGADLAALC 10
+ GAD+ ALC
Sbjct: 655 YTGADIEALC 664


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VGADLAALC 10
VGADL ALC
Sbjct: 385 VGADLEALC 393


Query: 1 HVGADLAALC 10
+ GAD+ A+C
Sbjct: 658 YSGADIEAVC 667


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 2 VGADLAALC 10
VGADL A+C
Sbjct: 353 VGADLKAVC 361


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 2 VGADLAALC 10
VGADL A+C
Sbjct: 353 VGADLKAVC 361


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 2 VGADLAALC 10
VGADL A+C
Sbjct: 353 VGADLKAVC 361


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 2 VGADLAALC 10
VGADL A+C
Sbjct: 353 VGADLKAVC 361


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HVGADLAALC 10
+VGADL LC
Sbjct: 670 YVGADLENLC 679


Query: 2 VGADLAAL 9
VGADLAAL
Sbjct: 398 VGADLAAL 405


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 2 VGADLAALC 10
VGAD+ A+C
Sbjct: 353 VGADIKAVC 361


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 HVGADLAAL 9
+ GADLAAL
Sbjct: 414 YTGADLAAL 422


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 GADLAALC 10
GADL A+C
Sbjct: 358 GADLKAIC 365


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VGADLAALC 10
VGA+L A+C
Sbjct: 376 VGAELKAIC 384


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 GADLAALC 10
GADL A+C
Sbjct: 360 GADLRAIC 367


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 3 GADLAALC 10
GADL A+C
Sbjct: 385 GADLRAIC 392


>sp|NIFE_METTM|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 2 VGADLAALC 10
+G D+AA+C
Sbjct: 158 IGDDIAAVC 166


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 3 GADLAALC 10
GAD+ A+C
Sbjct: 386 GADIKAIC 393


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GADLAALC 10
GAD+ A+C
Sbjct: 348 GADIKAIC 355


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 3 GADLAALC 10
GAD+ A+C
Sbjct: 357 GADIKAVC 364


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 3 GADLAALC 10
GAD+ A+C
Sbjct: 355 GADVKAIC 362


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 GADLAALC 10
GADL ++C
Sbjct: 360 GADLRSIC 367


>sp|RL10_METST|LARGE ribosomal subunit protein uL10|Methanosphaera stadtmanae (strain

Query: 2 VGADLAALC 10
VG DL A+C
Sbjct: 182 VGIDLLAVC 190


>sp|UREG_HALMA|UREASE accessory protein UreG|Haloarcula marismortui (strain ATCC 43049

Query: 1 HVGADLAAL 9
HVGADL +
Sbjct: 162 HVGADLDVM 170


>sp|AOX1_AERPE|HEME-COPPER oxidase subunit I+III|Aeropyrum pernix (strain ATCC 700893

Query: 2 VGADLAAL 9
+G DLAAL
Sbjct: 150 IGLDLAAL 157


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 HVGADLAAL 9
H+GADL +
Sbjct: 186 HMGADLTEI 194


>sp|COFE_NATPD|COENZYME F420:L-glutamate ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 HVGADLAAL 9
H G DLAAL
Sbjct: 13 HEGDDLAAL 21




83|Sequence|411|420|LAALCSEAAL

>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 LAALCSEAAL 10
LAALC EAA+
Sbjct: 386 LAALCKEAAM 395


Query: 1 LAALCSEAAL 10
+ ALC EAA+
Sbjct: 660 IEALCREAAM 669


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LAALCSEAAL 10
L ALC EAA+
Sbjct: 389 LEALCKEAAM 398


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LAALCSEAAL 10
LAAL EAA+
Sbjct: 419 LAALAKEAAI 428




84|Sequence|416|425|SEAALQAIRK

>sp|PGP_PYRFU|PHOSPHOGLYCOLATE phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EAALQAIRK 10
E ALQAIRK
Sbjct: 23 EEALQAIRK 31


>sp|AMPPA_THEPD|AMP phosphorylase|Thermofilum pendens (strain DSM 2475

Query: 3 AALQAIRK 10
A+LQAIRK
Sbjct: 86 ASLQAIRK 93


>sp|AATA_ARCFU|A-TYPE ATP synthase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EAALQAIRK 10
EAAL+ IRK
Sbjct: 568 EAALEKIRK 576


>sp|TRPD_AERPE|ANTHRANILATE phosphoribosyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SEAALQAIRK 10
+EAA+QAIR+
Sbjct: 319 AEAAVQAIRE 328




85|Sequence|421|430|QAIRKKMDLI

>sp|ORNAT_PYRHO|ORNITHINE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QAIRKKMDLI 10
+AI+K++DL+
Sbjct: 77 EAIKKQLDLV 86


>sp|IDH_HALVD|ISOCITRATE dehydrogenase [NADP]|Haloferax volcanii (strain ATCC 29605

Query: 2 AIRKKMDL 9
A+RKK+DL
Sbjct: 115 ALRKKLDL 122


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 QAIRKKMDL 9
Q +RK+MDL
Sbjct: 1000 QEMRKEMDL 1008


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QAIRKKMDL 9
QA+RK MDL
Sbjct: 968 QAMRKDMDL 976


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 QAIRKKMDL 9
Q++RK MDL
Sbjct: 963 QSMRKDMDL 971


>sp|GLMM_METAC|PROBABLE phosphoglucosamine mutase|Methanosarcina acetivorans (strain ATCC

Query: 2 AIRKKMDLI 10
AIR MDLI
Sbjct: 144 AIRDHMDLI 152


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 QAIRKKMDL 9
Q++RK MDL
Sbjct: 970 QSMRKDMDL 978


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QAIRKKMDLI 10
Q +RK++DL+
Sbjct: 983 QDMRKELDLV 992


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 4 RKKMDLI 10
R+KMDLI
Sbjct: 716 REKMDLI 722


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QAIRKKMDLI 10
Q +RK++DL+
Sbjct: 983 QDMRKELDLV 992


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QAIRKKMDLI 10
Q +RK++DL+
Sbjct: 983 QDMRKELDLV 992


>sp|AATA_METKA|A-TYPE ATP synthase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 1 QAIRKKMD 8
Q IRKK+D
Sbjct: 574 QEIRKKID 581


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 4 RKKMDLI 10
R+KMDLI
Sbjct: 717 REKMDLI 723


>sp|AMPPA_METLZ|AMP phosphorylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 IRKKMD 8
IRKKMD
Sbjct: 92 IRKKMD 97


>sp|AMPPA_THEPD|AMP phosphorylase|Thermofilum pendens (strain DSM 2475

Query: 1 QAIRKKM 7
QAIRKK+
Sbjct: 89 QAIRKKL 95




86|Sequence|426|435|KMDLIDLEDE

>sp|MTRA_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanococcus maripaludis (strain DSM

Query: 2 MDLIDLED 9
+DLID+ED
Sbjct: 134 IDLIDVED 141


>sp|MTRA_METM7|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanococcus maripaludis (strain C7

Query: 2 MDLIDLED 9
+DLID+ED
Sbjct: 134 IDLIDVED 141


>sp|MTRA_META3|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanococcus aeolicus (strain ATCC

Query: 2 MDLIDLED 9
+DLID+ED
Sbjct: 134 VDLIDVED 141


>sp|SMC_THEAC|CHROMOSOME partition protein Smc|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 MDLIDLEDE 10
MD +D ED+
Sbjct: 587 MDFVDFEDQ 595


>sp|MTRA_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 2 MDLIDLED 9
+DLID+ED
Sbjct: 138 VDLIDVED 145


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 MDLIDLED 9
+DL+DLE+
Sbjct: 401 LDLVDLEE 408


>sp|GGR1_METBU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanococcoides burtonii (strain DSM 6242

Query: 1 KMDLIDL 7
KMDLID
Sbjct: 367 KMDLIDF 373


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 KMDLIDLE 8
KM+LID+E
Sbjct: 555 KMELIDIE 562


>sp|PURA_METTH|ADENYLOSUCCINATE synthetase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 DLIDLEDE 10
D IDL DE
Sbjct: 331 DTIDLRDE 338


>sp|EF1A_THEON|ELONGATION factor 1-alpha|Thermococcus onnurineus (strain NA1)

Query: 1 KMDLIDLEDE 10
KMD++D +++
Sbjct: 145 KMDMVDYDEK 154




87|Sequence|431|440|DLEDETIDAE

>sp|RS5_METMJ|SMALL ribosomal subunit protein uS5|Methanoculleus marisnigri (strain

Query: 1 DLEDETID 8
DLEDE +D
Sbjct: 48 DLEDEVLD 55


>sp|RS5_METAC|SMALL ribosomal subunit protein uS5|Methanosarcina acetivorans (strain

Query: 1 DLEDETID 8
DLEDE +D
Sbjct: 47 DLEDEVLD 54


>sp|RS5_METMA|SMALL ribosomal subunit protein uS5|Methanosarcina mazei (strain ATCC

Query: 1 DLEDETID 8
DLEDE +D
Sbjct: 47 DLEDEVLD 54


>sp|RS5_METB6|SMALL ribosomal subunit protein uS5|Methanoregula boonei (strain DSM

Query: 1 DLEDETID 8
DLEDE +D
Sbjct: 48 DLEDEVLD 55


>sp|RS5_METBF|SMALL ribosomal subunit protein uS5|Methanosarcina barkeri (strain

Query: 1 DLEDETID 8
DLEDE +D
Sbjct: 47 DLEDEVLD 54


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DLEDETID 8
DLE ET+D
Sbjct: 188 DLEAETVD 195


>sp|RS5_PICTO|SMALL ribosomal subunit protein uS5|Picrophilus torridus (strain ATCC

Query: 1 DLEDETIDAE 10
DL+DE I+ E
Sbjct: 45 DLKDEVINIE 54


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 1 DLEDETID 8
DLE ET+D
Sbjct: 188 DLEAETVD 195


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DLEDETID 8
DLE ET+D
Sbjct: 184 DLEAETVD 191


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 1 DLEDETID 8
DLED T+D
Sbjct: 489 DLEDVTLD 496


>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DLEDETI 7
DLEDET+
Sbjct: 207 DLEDETV 213


>sp|MPTA_HALWD|GTP cyclohydrolase MptA|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DLEDETID 8
D+EDETI+
Sbjct: 176 DIEDETIE 183




88|Sequence|436|445|TIDAEVMNSL

>sp|RAD50_METKA|DNA double-strand break repair Rad50|Methanopyrus kandleri (strain AV19

Query: 2 IDAEVMNSL 10
+D EVMN+L
Sbjct: 115 VDREVMNAL 123


>sp|GYAR_THEPD|GLYOXYLATE reductase|Thermofilum pendens (strain DSM 2475

Query: 2 IDAEVMNS 9
IDAEVM++
Sbjct: 59 IDAEVMDA 66


>sp|GATB_SULTO|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfurisphaera tokodaii (strain DSM

Query: 2 IDAEVMNSL 10
I+AE+ NSL
Sbjct: 65 INAEIANSL 73




89|Sequence|441|450|VMNSLAVTMD

>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VMNSLAVTMD 10
V NSL +T+D
Sbjct: 295 VANSLGITLD 304


>sp|DMD_SACS2|DIPHOSPHOMEVALONATE decarboxylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 NSLAVTMD 10
NSL++T+D
Sbjct: 33 NSLSITLD 40




90|Sequence|446|455|AVTMDDFRWA

>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VTMDDFRWA 10
VTMDDFR A
Sbjct: 399 VTMDDFRKA 407


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 2 VTMDDFRWA 10
VTMDDF+ A
Sbjct: 422 VTMDDFKEA 430


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 MDDFRW 9
MDDF+W
Sbjct: 161 MDDFKW 166


>sp|KPTA_METBF|PROBABLE RNA 2'-phosphotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 AVTMDDFRW 9
VTMD F W
Sbjct: 51 GVTMDRFGW 59


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 2 VTMDDF 7
VTMDDF
Sbjct: 408 VTMDDF 413


>sp|METE_THEKO|METHIONINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VTMDDFRW 9
+ +D+FRW
Sbjct: 110 LVLDEFRW 117


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 MDDFRW 9
+DDF+W
Sbjct: 161 LDDFKW 166


>sp|PSA_THEKO|PROTEASOME subunit alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VTMDDFRW 9
+TMD+ RW
Sbjct: 215 ITMDEKRW 222


>sp|PSA_THEK1|PROTEASOME subunit alpha|Thermococcus sp. (strain JCM 11816

Query: 2 VTMDDFRW 9
+TMD+ RW
Sbjct: 215 ITMDEKRW 222


>sp|SYE_METBF|GLUTAMATE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 MDDFRW 9
+DDF+W
Sbjct: 161 LDDFKW 166


>sp|Y420_ARCFU|UPF0248 protein AF_0420|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 MDDFRW 9
MD FRW
Sbjct: 1 MDKFRW 6


>sp|RNP3_METKA|RIBONUCLEASE P protein component 3|Methanopyrus kandleri (strain AV19 /

Query: 2 VTMDDFRW 9
+ +DD RW
Sbjct: 44 LNIDDLRW 51


>sp|PSA_THEON|PROTEASOME subunit alpha|Thermococcus onnurineus (strain NA1)

Query: 2 VTMDDFRW 9
+TM D RW
Sbjct: 215 ITMKDKRW 222


>sp|PSA_THEGJ|PROTEASOME subunit alpha|Thermococcus gammatolerans (strain DSM 15229

Query: 2 VTMDDFRW 9
+T+D+ RW
Sbjct: 215 ITLDEKRW 222


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 2 VTMDDFRW 9
V DDF W
Sbjct: 214 VINDDFHW 221




91|Sequence|451|460|DFRWALSQSN

>sp|GATD_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcoides burtonii (strain DSM

Query: 4 WALSQSN 10
WAL QSN
Sbjct: 386 WALGQSN 392


>sp|ABLA_METMP|L-LYSINE 2,3-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DFRWALSQS 9
D++W LS S
Sbjct: 27 DYKWQLSNS 35


>sp|GCSPA_METS5|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Metallosphaera

Query: 1 DFRWALSQ 8
D RW L+Q
Sbjct: 54 DIRWRLNQ 61


>sp|SAHH_AERPE|ADENOSYLHOMOCYSTEINASE pernix (strain ATCC 700893

Query: 1 DFRWALS 7
+++WALS
Sbjct: 107 EYKWALS 113




92|Sequence|456|465|LSQSNPSALR

>sp|SYS_AERPE|SERINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LSQSNPSALR 10
L +SNP AL+
Sbjct: 9 LLRSNPEALK 18


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 LSQSNPSALR 10
LS+ PSA+R
Sbjct: 441 LSEVEPSAMR 450




93|Sequence|461|470|PSALRETVVE

>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 PSALRETVVE 10
PSA+RE +VE
Sbjct: 436 PSAMREVLVE 445


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 PSALRETVVE 10
PSA+RE +VE
Sbjct: 446 PSAMREVLVE 455


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PSALRETVVE 10
PSA+RE +VE
Sbjct: 439 PSAMREVLVE 448


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PSALRETVVE 10
PS+LRE +VE
Sbjct: 451 PSSLREVMVE 460


>sp|SYE_METKA|GLUTAMATE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 PSALRETVVE 10
P A+RET++E
Sbjct: 369 PEAIRETILE 378


>sp|HPRL1_HALJB|HGPRTASE-LIKE protein 1|Halalkalicoccus jeotgali (strain DSM 18796

Query: 1 PSALRETVVE 10
P+ LRE VVE
Sbjct: 35 PALLREVVVE 44


>sp|GLMS_METTH|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanothermobacter

Query: 1 PSALRETVVE 10
PSA+R+T+ E
Sbjct: 261 PSAVRDTLTE 270


>sp|HPRL2_HALTV|HGPRTASE-LIKE protein 2|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 PSALRETVVE 10
P LRE VVE
Sbjct: 35 PDLLREVVVE 44


>sp|HPRL2_NATMM|HGPRTASE-LIKE protein 2|Natrialba magadii (strain ATCC 43099

Query: 1 PSALRETVVE 10
P+ LRE V+E
Sbjct: 35 PALLREVVIE 44


>sp|MEND_NATPD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 SALRETVVE 10
+ALRE VVE
Sbjct: 574 TALREAVVE 582


>sp|FLA2_PYRHO|PROBABLE flagellin PH0548|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PSALRETVVE 10
PS ETVVE
Sbjct: 196 PSTYTETVVE 205


>sp|FTHS_HALMA|FORMATE--TETRAHYDROFOLATE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 ALRETVV 9
ALRETVV
Sbjct: 164 ALRETVV 170


>sp|SYE_THEON|GLUTAMATE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 PSALRETVVE 10
P A+RE ++E
Sbjct: 373 PEAIRELIIE 382


>sp|LONB_HALSA|ARCHAEAL Lon protease|Halobacterium salinarum (strain ATCC 700922

Query: 1 PSALRETVVE 10
P A+RE ++E
Sbjct: 404 PDAIRELILE 413


>sp|FTHS_HALWD|FORMATE--TETRAHYDROFOLATE ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 ALRETVV 9
ALRETV+
Sbjct: 191 ALRETVI 197


>sp|SYE_THEKO|GLUTAMATE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PSALRETVVE 10
P A+RE ++E
Sbjct: 374 PEAIRELIIE 383


>sp|GLYA_PYRNV|SERINE hydroxymethyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PSALRETVVE 10
P+A+R VVE
Sbjct: 391 PAAVRRDVVE 400


>sp|SYE_METHJ|GLUTAMATE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PSALRETVVE 10
P A+R VVE
Sbjct: 370 PQAVRNAVVE 379




94|Sequence|466|475|ETVVEVPQVT

>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1

Query: 1 ETVVEVP 7
ETVVE+P
Sbjct: 37 ETVVEIP 43


>sp|RL3_PICTO|LARGE ribosomal subunit protein uL3|Picrophilus torridus (strain ATCC

Query: 2 TVVEVPQVT 10
TVVEVP +T
Sbjct: 73 TVVEVPPLT 81


>sp|HEM1_METAR|GLUTAMYL-TRNA reductase|Methanocella arvoryzae (strain DSM 22066

Query: 1 ETVVEVPQVT 10
ETV EVP VT
Sbjct: 274 ETVGEVPGVT 283


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 3 VVEVPQVT 10
VVEVP VT
Sbjct: 1060 VVEVPNVT 1067


>sp|DNAG_METAR|DNA primase DnaG|Methanocella arvoryzae (strain DSM 22066

Query: 1 ETVVEVPQ 8
E V+EVPQ
Sbjct: 266 EQVIEVPQ 273


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain

Query: 4 VEVPQVT 10
VEVPQ T
Sbjct: 42 VEVPQAT 48




95|Sequence|471|480|VPQVTWEDIG

>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 VPQVTWEDIG 10
VP V WEDIG
Sbjct: 446 VPNVKWEDIG 455


Query: 1 VPQVTWEDIG 10
VP VT+EDIG
Sbjct: 173 VPDVTYEDIG 182


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PQVTWEDIG 10
P+V+WEDIG
Sbjct: 207 PKVSWEDIG 215


Query: 1 VPQVTWEDIG 10
VP+V W DIG
Sbjct: 481 VPKVNWNDIG 490


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VPQVTWEDIG 10
VP V WEDIG
Sbjct: 449 VPNVKWEDIG 458


Query: 1 VPQVTWEDIG 10
VP VT+EDIG
Sbjct: 176 VPDVTYEDIG 185


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VPQVTWEDIG 10
VP V W+DIG
Sbjct: 461 VPNVHWDDIG 470


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 VPQVTWEDIG 10
+P++TW+D+G
Sbjct: 456 LPKITWDDVG 465


Query: 4 VTWEDIG 10
+T+EDIG
Sbjct: 186 ITYEDIG 192


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 2 PQVTWEDIG 10
P VT+EDIG
Sbjct: 145 PDVTYEDIG 153


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 PQVTWEDIG 10
P+VT++DIG
Sbjct: 133 PRVTYQDIG 141


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PQVTWEDIG 10
P+V++EDIG
Sbjct: 136 PEVSYEDIG 144


>sp|QUEC_METBF|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VPQVTWEDIG 10
VP +++EDIG
Sbjct: 80 VPSLSFEDIG 89


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PQVTWEDIG 10
P+VT+ DIG
Sbjct: 133 PKVTYNDIG 141


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PQVTWEDIG 10
P VT+ DIG
Sbjct: 132 PNVTYNDIG 140


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 2 PQVTWEDIG 10
P VT++DIG
Sbjct: 147 PTVTYDDIG 155


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 2 PQVTWEDIG 10
P VT+ DIG
Sbjct: 132 PNVTYNDIG 140


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PQVTWEDIG 10
P VT+ DIG
Sbjct: 135 PNVTYNDIG 143


>sp|Y1479_METJA|UNCHARACTERIZED aminotransferase MJ1479|Methanocaldococcus jannaschii (strain

Query: 4 VTWEDIG 10
+TWE+IG
Sbjct: 34 ITWENIG 40


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PQVTWEDIG 10
P V +EDIG
Sbjct: 165 PNVRYEDIG 173


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 2 PQVTWEDIG 10
P V+++DIG
Sbjct: 174 PDVSYDDIG 182


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PQVTWEDIG 10
P T+EDIG
Sbjct: 148 PTETYEDIG 156


>sp|HIS5_METMA|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina mazei (strain

Query: 1 VPQVTWEDI 9
VPQ+ W +I
Sbjct: 115 VPQMGWNNI 123


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 PQVTWEDIG 10
P V +EDIG
Sbjct: 143 PDVGYEDIG 151


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 PQVTWEDIG 10
P VT+ DIG
Sbjct: 147 PSVTYADIG 155


>sp|HIS7_PYRFU|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 6 WEDIG 10
WEDIG
Sbjct: 55 WEDIG 59


>sp|MCH_METVS|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VPQVTWEDI 9
+P+VT+E+I
Sbjct: 120 MPKVTYEEI 128


>sp|CSG_METVS|S-LAYER protein|Methanococcus vannielii (strain ATCC 35089

Query: 6 WEDIG 10
WEDIG
Sbjct: 345 WEDIG 349


>sp|CYNS_SULTO|CYANATE hydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 QVTWEDIG 10
++TWE+IG
Sbjct: 19 RLTWEEIG 26


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PQVTWEDIG 10
P+ T+E+IG
Sbjct: 148 PEETYENIG 156


>sp|RL4_THEON|LARGE ribosomal subunit protein uL4|Thermococcus onnurineus (strain NA1)

Query: 1 VPQVTWEDI 9
V ++ WEDI
Sbjct: 97 VEKIIWEDI 105


>sp|MCH_METJA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PQVTWEDIG 10
P+ T+E+IG
Sbjct: 121 PKKTYEEIG 129


>sp|RL4_PYRFU|LARGE ribosomal subunit protein uL4|Pyrococcus furiosus (strain ATCC

Query: 1 VPQVTWEDI 9
V ++ WEDI
Sbjct: 97 VEKIIWEDI 105


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 PQVTWEDIG 10
P VT+ +IG
Sbjct: 129 PNVTYSEIG 137


>sp|GLMM_METMP|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain DSM 14266

Query: 3 QVTWEDIG 10
+ TW++IG
Sbjct: 126 ECTWDNIG 133


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 PQVTWEDIG 10
P VT+ +IG
Sbjct: 129 PNVTYSEIG 137


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 PQVTWEDIG 10
P VT+ +IG
Sbjct: 129 PNVTYSEIG 137


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PQVTWEDIG 10
P VT+ +IG
Sbjct: 129 PNVTYSEIG 137


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 PQVTWEDIG 10
P VT+ +IG
Sbjct: 129 PNVTYSEIG 137


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 PQVTWEDIG 10
P VT+ +IG
Sbjct: 129 PNVTYSEIG 137


>sp|ARGJ_METKA|GLUTAMATE N-acetyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 6 WEDIG 10
WEDIG
Sbjct: 121 WEDIG 125


>sp|IF2G_NATPD|TRANSLATION initiation factor 2 subunit|Natronomonas pharaonis (strain ATCC

Query: 2 PQVTWEDI 9
P TWED+
Sbjct: 223 PGTTWEDL 230


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PQVTWEDIG 10
P VT+ +IG
Sbjct: 129 PNVTYSEIG 137


>sp|RL3_METS5|LARGE ribosomal subunit protein uL3|Metallosphaera sedula (strain ATCC

Query: 1 VPQVTWEDI 9
VP+VT+ D+
Sbjct: 328 VPKVTYVDV 336


>sp|MSRA_SACS2|PEPTIDE methionine sulfoxide reductase MsrA|Saccharolobus solfataricus

Query: 1 VPQVTWEDI 9
VP T+ED+
Sbjct: 36 VPNPTYEDV 44


>sp|Y1170_METST|PUTATIVE nickel insertion protein|Methanosphaera stadtmanae (strain ATCC

Query: 5 TWEDI 9
TWED+
Sbjct: 352 TWEDV 356


>sp|PURA_METTP|ADENYLOSUCCINATE synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 PQVTWEDI 9
P+V WE++
Sbjct: 74 PKVLWEEL 81


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 5 TWEDI 9
TWED+
Sbjct: 527 TWEDV 531


>sp|AMT1_HALMT|AMMONIUM transporter Amt1|Haloferax mediterranei (strain ATCC 33500

Query: 1 VPQVTW 6
VP VTW
Sbjct: 304 VPHVTW 309


>sp|RL4_THEKO|LARGE ribosomal subunit protein uL4|Thermococcus kodakarensis (strain

Query: 1 VPQVTWEDI 9
V ++ WEDI
Sbjct: 97 VEKIIWEDI 105


>sp|Y2251_ARCFU|PROTEIN AF_2251|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QVTWEDIG 10
++ W D+G
Sbjct: 120 EIVWNDVG 127


>sp|RL4_THEGJ|LARGE ribosomal subunit protein uL4|Thermococcus gammatolerans (strain

Query: 1 VPQVTWEDI 9
V ++ WEDI
Sbjct: 97 VEKIIWEDI 105




96|Sequence|476|485|WEDIGGLEDV

>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 WEDIGGLEDV 10
W+DIGGLEDV
Sbjct: 466 WDDIGGLEDV 475


Query: 1 WEDIGGLED 9
+EDIGGL +
Sbjct: 189 YEDIGGLSE 197


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 WEDIGGLEDV 10
WEDIGGLE+V
Sbjct: 451 WEDIGGLEEV 460


Query: 1 WEDIGGLED 9
+EDIGGL++
Sbjct: 178 YEDIGGLKE 186


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 WEDIGGLEDV 10
W DIGGL++V
Sbjct: 486 WNDIGGLDNV 495


Query: 1 WEDIGGLED 9
WEDIG LE+
Sbjct: 211 WEDIGDLEE 219


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WEDIGGLE 8
WEDIGGLE
Sbjct: 454 WEDIGGLE 461


Query: 1 WEDIGGLE 8
+EDIGGL+
Sbjct: 181 YEDIGGLK 188


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 WEDIGGLE 8
+EDIGGLE
Sbjct: 152 YEDIGGLE 159


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 WEDIGGLED 9
+EDIGGLE+
Sbjct: 188 YEDIGGLEN 196


Query: 1 WEDIGGL 7
W+D+GGL
Sbjct: 461 WDDVGGL 467


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WEDIGGLE 8
+EDIGGLE
Sbjct: 169 YEDIGGLE 176


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 WEDIGGLED 9
+EDIGGL+D
Sbjct: 147 YEDIGGLDD 155


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 1 WEDIGGLED 9
+EDIGGLE+
Sbjct: 149 YEDIGGLEE 157


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 WEDIGGLE 8
++DIGGLE
Sbjct: 137 YQDIGGLE 144


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WEDIGGLE 8
+EDIGGL+
Sbjct: 140 YEDIGGLD 147


>sp|CSG_METVS|S-LAYER protein|Methanococcus vannielii (strain ATCC 35089

Query: 1 WEDIGG 6
WEDIGG
Sbjct: 345 WEDIGG 350


>sp|RFCL_PYRIL|REPLICATION factor C large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 2 EDIGGLEDV 10
ED+GGLE +
Sbjct: 131 EDLGGLETI 139


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 WEDIGGLE 8
+E+IGGLE
Sbjct: 152 YENIGGLE 159


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 WEDIGGLE 8
+E+IGGLE
Sbjct: 152 YEEIGGLE 159


>sp|RFCL_PYRCJ|REPLICATION factor C large subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 EDIGGLEDV 10
ED+GGLE +
Sbjct: 131 EDLGGLEAI 139


>sp|SPSS_METTH|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 EDIGGLEDV 10
EDIGG+E +
Sbjct: 291 EDIGGIEQL 299


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WEDIGGLE 8
+ DIGGLE
Sbjct: 137 YNDIGGLE 144


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 WEDIGGLED 9
++D+GGLE+
Sbjct: 138 FKDVGGLEE 146


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 WEDIGGLED 9
+E IGGLE+
Sbjct: 150 YEQIGGLEE 158


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 WEDIGGLED 9
+EDIGGL +
Sbjct: 147 FEDIGGLNN 155


>sp|Y995_METJA|UNCHARACTERIZED protein MJ0995|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WEDIGGLEDV 10
+ +IGG EDV
Sbjct: 31 YANIGGAEDV 40


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 WEDIGGLED 9
+EDIGGL +
Sbjct: 147 FEDIGGLNN 155


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 WEDIGGLED 9
+ DIGGL+D
Sbjct: 151 YADIGGLDD 159


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 WEDIGGLED 9
+EDIGGL +
Sbjct: 147 FEDIGGLNN 155


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 1 WEDIGGLED 9
+EDIGGL +
Sbjct: 147 FEDIGGLNN 155


>sp|DNLI_META3|DNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 EDIGGLEDV 10
EDI +ED+
Sbjct: 541 EDINSIEDI 549


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 WEDIGGLED 9
+ +IGGLE+
Sbjct: 133 YSEIGGLEE 141


>sp|PDXS_NATPD|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Natronomonas pharaonis (strain

Query: 3 DIGGLEDV 10
D GGLEDV
Sbjct: 70 DPGGLEDV 77


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 WEDIGGLED 9
++DIGGL++
Sbjct: 178 YDDIGGLDE 186


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 WEDIGGLED 9
+ +IGGLE+
Sbjct: 133 YSEIGGLEE 141


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 WEDIGGLED 9
+ +IGGLE+
Sbjct: 133 YSEIGGLEE 141


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 WEDIGGLED 9
+ +IGGLE+
Sbjct: 133 YSEIGGLEE 141


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 WEDIGGLED 9
+ +IGGLE+
Sbjct: 133 YSEIGGLEE 141


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 WEDIGGLED 9
+ +IGGLE+
Sbjct: 133 YSEIGGLEE 141


>sp|KADA_AERPE|ADENYLATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 3 DIGGLEDV 10
DIGG+E V
Sbjct: 149 DIGGVEGV 156


>sp|RFCL_PYRAR|REPLICATION factor C large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 EDIGGLEDV 10
ED GGLE +
Sbjct: 131 EDAGGLEAI 139


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WEDIGGLED 9
+ +IGGLE+
Sbjct: 133 YSEIGGLEE 141


>sp|EF1B_CALMQ|ELONGATION factor 1-beta|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 EDIGGLE 8
EDIGG+E
Sbjct: 76 EDIGGIE 82


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 1 WEDIGGLED 9
+ DIGGL++
Sbjct: 177 YTDIGGLKE 185


>sp|FKBPL_METTH|LONG-TYPE peptidyl-prolyl cis-trans isomerase|Methanothermobacter

Query: 1 WEDIGGLEDV 10
WE+I G+E V
Sbjct: 215 WENIEGVEKV 224


>sp|PCNA3_SACS2|DNA polymerase sliding clamp 3|Saccharolobus solfataricus (strain ATCC

Query: 2 EDIGGLEDV 10
+D GGL+D+
Sbjct: 178 KDTGGLQDL 186


>sp|SECY_SACS2|PROTEIN translocase subunit SecY|Saccharolobus solfataricus (strain ATCC

Query: 1 WEDIGGLE 8
W D+ GL+
Sbjct: 367 WVDVAGLD 374


>sp|DP2S_PYRAB|DNA polymerase II small subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 EDIGGLEDV 10
E+IGGLE V
Sbjct: 122 EEIGGLELV 130


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 1 WEDIGGLE 8
+ DIGGL+
Sbjct: 138 YNDIGGLD 145


>sp|GATE_PYRNV|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum neutrophilum (strain DSM

Query: 1 WEDIGGL 7
W ++GGL
Sbjct: 337 WTELGGL 343


>sp|GATE_PYRCJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum calidifontis (strain DSM

Query: 1 WEDIGGL 7
W ++GGL
Sbjct: 337 WTELGGL 343


>sp|GATE_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum aerophilum (strain ATCC

Query: 1 WEDIGGL 7
W ++GGL
Sbjct: 337 WTELGGL 343




97|Sequence|481|490|GLEDVKRELQ

>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GLEDVKRELQ 10
GLEDVKRE++
Sbjct: 471 GLEDVKREIK 480


>sp|Y3539_METJA|UPF0252 protein MJECL39|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EDVKRELQ 10
EDVK+ELQ
Sbjct: 264 EDVKKELQ 271


>sp|AROC_PYRCJ|CHORISMATE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 EDVKRELQ 10
EDVKREL+
Sbjct: 37 EDVKRELE 44


>sp|AROC_PYRAE|CHORISMATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 EDVKRELQ 10
ED+KREL+
Sbjct: 37 EDIKRELE 44


>sp|AROC_PYRNV|CHORISMATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 EDVKRELQ 10
ED+KREL+
Sbjct: 37 EDIKRELE 44


>sp|AROC_PYRIL|CHORISMATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 EDVKRELQ 10
ED+KREL+
Sbjct: 37 EDIKRELE 44


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 GLEDVKRELQ 10
GLE+VK+EL+
Sbjct: 456 GLEEVKQELR 465


>sp|RADB_PYRFU|DNA repair and recombination protein|Pyrococcus furiosus (strain ATCC

Query: 1 GLEDVKRE 8
GLEDVK E
Sbjct: 217 GLEDVKNE 224


>sp|HIS8_HALSA|HISTIDINOL-PHOSPHATE aminotransferase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GLEDVKREL 9
G+E+V REL
Sbjct: 17 GIEEVAREL 25


>sp|HIS8_HALS3|HISTIDINOL-PHOSPHATE aminotransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GLEDVKREL 9
G+E+V REL
Sbjct: 17 GIEEVAREL 25


>sp|GCH3_METST|GTP cyclohydrolase III|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GLEDVKREL 9
GLED++ EL
Sbjct: 233 GLEDIRAEL 241


>sp|RAD50_SULTO|DNA double-strand break repair Rad50|Sulfurisphaera tokodaii (strain

Query: 2 LEDVKRELQ 10
LE++KREL+
Sbjct: 207 LENIKRELE 215


>sp|FEN_SULAC|FLAP endonuclease 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LEDVKRELQ 10
+EDVKRE+
Sbjct: 7 VEDVKREIN 15


>sp|SYH_AERPE|HISTIDINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GLEDVKRELQ 10
G+E V+REL+
Sbjct: 196 GVEGVRRELE 205


>sp|HIS8_HALMA|HISTIDINOL-PHOSPHATE aminotransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GLEDVKREL 9
G+E+V REL
Sbjct: 17 GIEEVAREL 25


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 2 LEDVKRELQ 10
L+DV+R LQ
Sbjct: 491 LDDVRRALQ 499


>sp|HIS8_NATPD|HISTIDINOL-PHOSPHATE aminotransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GLEDVKREL 9
G+E+V REL
Sbjct: 17 GIEEVAREL 25


>sp|RAD50_METTH|DNA double-strand break repair Rad50|Methanothermobacter

Query: 2 LEDVKRELQ 10
LED KREL+
Sbjct: 199 LEDKKRELE 207


>sp|FTSZ1_HALSA|CELL division protein FtsZ 1|Halobacterium salinarum (strain ATCC

Query: 2 LEDVKRELQ 10
LEDV +ELQ
Sbjct: 43 LEDVLQELQ 51


>sp|FTSZ1_HALS3|CELL division protein FtsZ 1|Halobacterium salinarum (strain ATCC

Query: 2 LEDVKRELQ 10
LEDV +ELQ
Sbjct: 43 LEDVLQELQ 51


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GLEDVKRELQ 10
GLEDVK L+
Sbjct: 110 GLEDVKEALK 119


>sp|RS13_NANEQ|SMALL ribosomal subunit protein uS13|Nanoarchaeum equitans (strain

Query: 4 DVKRELQ 10
D+KRE+Q
Sbjct: 111 DIKREMQ 117


>sp|RL23_THEVO|LARGE ribosomal subunit protein uL23|Thermoplasma volcanium (strain

Query: 3 EDVKRELQ 10
ED+KRE++
Sbjct: 35 EDIKREVE 42


>sp|GLNA_METMP|GLUTAMINE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GLEDVKREL 9
GL+ VKR+L
Sbjct: 357 GLDGVKRKL 365


>sp|IF6_SACS2|TRANSLATION initiation factor 6|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GLEDVKR 7
G+ED+KR
Sbjct: 132 GVEDIKR 138


>sp|DGGGP_SULTO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GLEDVKREL 9
G+EDVK ++
Sbjct: 178 GIEDVKGDM 186


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GLEDVKRELQ 10
LED+KRE +
Sbjct: 335 ALEDLKRETE 344


>sp|GLNK1_METMA|NITROGEN regulatory protein GlnK1|Methanosarcina mazei (strain ATCC

Query: 2 LEDVKRELQ 10
L+ VKRELQ
Sbjct: 16 LDAVKRELQ 24


>sp|RLME_METTP|RIBOSOMAL RNA large subunit methyltransferase|Methanothrix thermoacetophila

Query: 2 LEDVKRELQ 10
LE+VKRE
Sbjct: 159 LEEVKREFS 167


>sp|PFDB_METJA|PREFOLDIN subunit beta|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EDVKRELQ 10
EDVK+EL+
Sbjct: 67 EDVKKELE 74


>sp|Y534_METFV|UNCHARACTERIZED protein Mfer_0534|Methanothermus fervidus (strain ATCC 43054

Query: 1 GLEDVKRELQ 10
G+E +KRE +
Sbjct: 257 GMESIKREAE 266


>sp|FEN_SACS2|FLAP endonuclease 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LEDVKRELQ 10
++DVKREL
Sbjct: 7 VKDVKRELS 15




98|Sequence|486|495|KRELQELVQY

>sp|MDH_NITMS|MALATE dehydrogenase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 KRELQELVQ 9
K +L+ELVQ
Sbjct: 197 KEKLEELVQ 205


>sp|CBIA_SACS2|COBYRINATE a,c-diamide synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RELQELVQY 10
RE+Q L++Y
Sbjct: 192 REVQNLIRY 200


>sp|AATA_METM5|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C5 /

Query: 3 ELQELVQ 9
ELQE+VQ
Sbjct: 469 ELQEIVQ 475


>sp|AATA_METVS|A-TYPE ATP synthase subunit A|Methanococcus vannielii (strain ATCC 35089

Query: 3 ELQELVQ 9
ELQE+VQ
Sbjct: 469 ELQEIVQ 475


>sp|AATA_METMP|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain DSM 14266

Query: 3 ELQELVQ 9
ELQE+VQ
Sbjct: 469 ELQEIVQ 475


>sp|AATA_METM6|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C6 /

Query: 3 ELQELVQ 9
ELQE+VQ
Sbjct: 469 ELQEIVQ 475


>sp|AATA_METM7|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C7 /

Query: 3 ELQELVQ 9
ELQE+VQ
Sbjct: 469 ELQEIVQ 475


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 3 ELQELVQ 9
ELQE+VQ
Sbjct: 467 ELQEIVQ 473


>sp|AATA_METBF|A-TYPE ATP synthase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 3 ELQELVQ 9
ELQE+VQ
Sbjct: 463 ELQEIVQ 469


>sp|AATA_METBA|A-TYPE ATP synthase subunit A|Methanosarcina barkeri

Query: 3 ELQELVQ 9
ELQE+VQ
Sbjct: 463 ELQEIVQ 469


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 ELQELVQ 9
ELQE+VQ
Sbjct: 464 ELQEIVQ 470


>sp|RL10_PYRHO|LARGE ribosomal subunit protein uL10|Pyrococcus horikoshii (strain ATCC

Query: 1 KRELQELVQY 10
K EL++LV+Y
Sbjct: 73 KPELEKLVEY 82


>sp|AATA_META3|A-TYPE ATP synthase subunit A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 ELQELVQ 9
ELQE+VQ
Sbjct: 470 ELQEIVQ 476


>sp|AATA_METB6|A-TYPE ATP synthase subunit A|Methanoregula boonei (strain DSM 21154

Query: 3 ELQELVQ 9
ELQE+VQ
Sbjct: 472 ELQEIVQ 478


>sp|KDGA_SULAC|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KRELQELVQ 9
KR++QELV
Sbjct: 280 KRKIQELVH 288


>sp|AATA_METMJ|A-TYPE ATP synthase subunit A|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 ELQELVQ 9
ELQE+VQ
Sbjct: 469 ELQEIVQ 475


>sp|AATA_METMA|A-TYPE ATP synthase subunit A|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 ELQELVQ 9
ELQE+VQ
Sbjct: 463 ELQEIVQ 469


>sp|AATA_HALMA|A-TYPE ATP synthase subunit A|Haloarcula marismortui (strain ATCC 43049

Query: 3 ELQELVQ 9
ELQE+VQ
Sbjct: 473 ELQEIVQ 479


>sp|AATA1_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 ELQELVQ 9
ELQE+VQ
Sbjct: 466 ELQEIVQ 472


>sp|AATA_HALVD|A-TYPE ATP synthase subunit A|Haloferax volcanii (strain ATCC 29605

Query: 1 KRELQELVQ 9
+ ELQE+VQ
Sbjct: 471 ENELQEIVQ 479


>sp|AATA_METBU|A-TYPE ATP synthase subunit A|Methanococcoides burtonii (strain DSM 6242

Query: 3 ELQELVQ 9
ELQE+VQ
Sbjct: 463 ELQEIVQ 469


>sp|AATA_METAR|A-TYPE ATP synthase subunit A|Methanocella arvoryzae (strain DSM 22066

Query: 3 ELQELVQ 9
ELQE+VQ
Sbjct: 464 ELQEIVQ 470


>sp|AATA_METAC|A-TYPE ATP synthase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 3 ELQELVQ 9
ELQE+VQ
Sbjct: 463 ELQEIVQ 469


>sp|G3PP_METKA|GLYCERALDEHYDE 3-phosphate phosphatase|Methanopyrus kandleri (strain AV19 /

Query: 2 RELQELVQ 9
RELQE+V+
Sbjct: 47 RELQEVVK 54


>sp|AATA_METS3|A-TYPE ATP synthase subunit A|Methanobrevibacter smithii (strain ATCC

Query: 3 ELQELVQ 9
ELQE+VQ
Sbjct: 470 ELQEIVQ 476




99|Sequence|491|500|ELVQYPVEHP

>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ELVQYPVEHP 10
E+V++P+ HP
Sbjct: 226 EIVEWPMRHP 235


>sp|AROE_METAR|SHIKIMATE dehydrogenase (NADP(+))|Methanocella arvoryzae (strain DSM 22066

Query: 2 LVQYPVEH 9
+V YPVEH
Sbjct: 7 VVGYPVEH 14


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 ELVQYPVEHP 10
E+V+ P++HP
Sbjct: 203 EMVELPMKHP 212


>sp|RNZ_METJA|RIBONUCLEASE Z|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ELVQYPVEH 9
E++ YP EH
Sbjct: 135 EIIAYPTEH 143


>sp|RPO11_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo11|Pyrobaculum aerophilum (strain ATCC

Query: 1 ELVQYPVEHP 10
E VQ+ V+HP
Sbjct: 43 EYVQFDVDHP 52


>sp|AROE_METVS|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus vannielii (strain ATCC

Query: 2 LVQYPVEH 9
L+ +PVEH
Sbjct: 11 LIGHPVEH 18


>sp|AROE_METM6|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus maripaludis (strain C6 /

Query: 2 LVQYPVEH 9
L+ +PVEH
Sbjct: 11 LIGHPVEH 18


>sp|AROE_META3|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus aeolicus (strain ATCC

Query: 2 LVQYPVEH 9
L+ +PVEH
Sbjct: 11 LIGHPVEH 18


>sp|AROE_METJA|SHIKIMATE dehydrogenase (NADP(+))|Methanocaldococcus jannaschii (strain

Query: 2 LVQYPVEH 9
L+ +PVEH
Sbjct: 11 LIGHPVEH 18


>sp|UVRC_METTH|UVRABC system protein C|Methanothermobacter thermautotrophicus (strain

Query: 2 LVQYPVE 8
L QYPVE
Sbjct: 303 LTQYPVE 309


>sp|AROE_METS3|SHIKIMATE dehydrogenase (NADP(+))|Methanobrevibacter smithii (strain ATCC

Query: 2 LVQYPVEH 9
L+ +PVEH
Sbjct: 11 LIGHPVEH 18


>sp|RIO1_METJA|RIO-TYPE serine/threonine-protein kinase Rio1|Methanocaldococcus jannaschii

Query: 2 LVQYPVEHP 10
+ Q+P+ HP
Sbjct: 237 ITQHPLAHP 245


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ELVQYPVEHP 10
E+++ P++HP
Sbjct: 196 EMIELPLKHP 205


>sp|SYFA_METLZ|PHENYLALANINE--TRNA ligase alpha subunit|Methanocorpusculum labreanum (strain ATCC

Query: 3 VQYPVEHP 10
+QY EHP
Sbjct: 321 IQYLAEHP 328


>sp|RL30_DESA1|LARGE ribosomal subunit protein uL30|Desulfurococcus amylolyticus

Query: 2 LVQYPVEHP 10
LV YP E P
Sbjct: 35 LVIYPAEQP 43


>sp|UVRC_METBU|UVRABC system protein C|Methanococcoides burtonii (strain DSM 6242

Query: 2 LVQYPV 7
LVQYP+
Sbjct: 310 LVQYPI 315


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain

Query: 5 YPVEH 9
YP+EH
Sbjct: 40 YPIEH 44


>sp|AROE_METKA|SHIKIMATE dehydrogenase (NADP(+))|Methanopyrus kandleri (strain AV19 /

Query: 2 LVQYPVEH 9
L+ +PVEH
Sbjct: 16 LIGHPVEH 23


>sp|RPO11_METVS|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanococcus vannielii (strain ATCC

Query: 3 VQYPVEHP 10
V++PV HP
Sbjct: 46 VEHPVLHP 53




100|Sequence|496|505|PVEHPDKFLK

>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 2 VEHPDKFLK 10
VEHPD+F +
Sbjct: 102 VEHPDQFTR 110


>sp|RS3A_HALMA|SMALL ribosomal subunit protein eS1|Haloarcula marismortui (strain ATCC

Query: 1 PVEHPDKFL 9
P E PDK L
Sbjct: 33 PAEEPDKVL 41


>sp|SUCC_DESA1|SUCCINATE--COA ligase [ADP-forming] subunit beta|Desulfurococcus amylolyticus

Query: 3 EHPDKFLK 10
+HPDK L+
Sbjct: 132 KHPDKILR 139


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PVEHPDKFLK 10
P EH D F+K
Sbjct: 504 PTEHVDGFMK 513


>sp|LEUC_HALMA|3-ISOPROPYLMALATE dehydratase large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 3 EHPDKF 8
EHP+KF
Sbjct: 252 EHPEKF 257


>sp|Y1365_METJA|UNCHARACTERIZED protein MJ1365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VEHPDKFLK 10
V++P+KF+K
Sbjct: 169 VKNPEKFIK 177


>sp|IDH_ARCFU|ISOCITRATE dehydrogenase [NADP]|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PVEHPDK 7
P++HP+K
Sbjct: 136 PIKHPEK 142


>sp|NASA_HALMT|ASSIMILATORY nitrate reductase|Haloferax mediterranei (strain ATCC 33500

Query: 1 PVEHPD 6
P EHPD
Sbjct: 357 PFEHPD 362


>sp|PYRH_METMA|URIDYLATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 PDKFLK 10
PD+FLK
Sbjct: 18 PDRFLK 23


>sp|Y1856_ARCFU|UNCHARACTERIZED protein AF_1856|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 HPDKFL 9
HPD FL
Sbjct: 244 HPDAFL 249


>sp|Y2170_ARCFU|KELCH domain-containing protein AF_2170|Archaeoglobus fulgidus (strain

Query: 1 PVEHP 5
P+EHP
Sbjct: 174 PIEHP 178


>sp|HPCAS_SULTO|3-HYDROXYPROPIONYL-COENZYME A synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VEHPDKF 8
+E PDKF
Sbjct: 36 IEEPDKF 42


>sp|Y1684_METTH|UNCHARACTERIZED protein MTH_1684|Methanothermobacter thermautotrophicus (strain

Query: 1 PVEHPDK 7
PV HP++
Sbjct: 338 PVHHPER 344


>sp|MJK2_METJA|PROBABLE potassium channel protein 2|Methanocaldococcus jannaschii (strain

Query: 3 EHPDKFL 9
++PDKFL
Sbjct: 149 KYPDKFL 155


>sp|AKSF_METJA|HOMOISOCITRATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VEHPDKF 8
++HP+KF
Sbjct: 220 IKHPEKF 226


>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 2 VEHPDKFLK 10
V+ PD FLK
Sbjct: 252 VQIPDPFLK 260


>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 EHPDKFLK 10
+HP KF+K
Sbjct: 550 QHPIKFIK 557


>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 EHPDKFLK 10
+HP KF+K
Sbjct: 550 QHPVKFIK 557


>sp|PYRH_METBF|URIDYLATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 5 PDKFLK 10
PD+FLK
Sbjct: 18 PDRFLK 23


>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 3 EHPDKFLK 10
+HP KF+K
Sbjct: 553 QHPVKFIK 560


>sp|PPSA_METTH|PROBABLE phosphoenolpyruvate synthase|Methanothermobacter thermautotrophicus

Query: 2 VEHPDKFLK 10
V+HPD+ K
Sbjct: 630 VQHPDELRK 638


>sp|SYM_HALMA|METHIONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PVEHPDKFLK 10
PVE DK L+
Sbjct: 635 PVEGADKLLR 644


>sp|MFNA_META3|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus aeolicus (strain

Query: 3 EHPDKFL 9
EH DKFL
Sbjct: 375 EHIDKFL 381


>sp|RS4E_METHJ|SMALL ribosomal subunit protein eS4|Methanospirillum hungatei JF-1

Query: 1 PVEHPD 6
PV HPD
Sbjct: 71 PVRHPD 76


>sp|AATB_IGNH4|A-TYPE ATP synthase subunit B|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 EHPDKFLK 10
E+PD+F++
Sbjct: 128 EYPDEFIE 135


>sp|NDRZ_THEAC|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Thermoplasma

Query: 5 PDKFLK 10
PDK+LK
Sbjct: 747 PDKYLK 752


>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 4 HPDKFL 9
+PDKFL
Sbjct: 156 YPDKFL 161


>sp|SYS2_METM6|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 VEHPDKFL 9
V+HP KF
Sbjct: 329 VDHPSKFF 336


>sp|SYS2_METM7|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 VEHPDKFL 9
V+HP KF
Sbjct: 329 VDHPSKFF 336


>sp|SYS2_METM5|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 VEHPDKFL 9
V+HP KF
Sbjct: 329 VDHPSKFF 336




101|Sequence|501|510|DKFLKFGMTP

>sp|MTAD_PYRFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 KFGMTP 10
K+GMTP
Sbjct: 220 KYGMTP 225


>sp|FEN_HALSA|FLAP endonuclease 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 KFLKFGMTP 10
KF + G+TP
Sbjct: 69 KFFEHGLTP 77


>sp|FEN_HALS3|FLAP endonuclease 1|Halobacterium salinarum (strain ATCC 29341

Query: 2 KFLKFGMTP 10
KF + G+TP
Sbjct: 69 KFFEHGLTP 77


>sp|GLMS_SULTO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Sulfurisphaera tokodaii (strain DSM

Query: 1 DKFLKFGMTP 10
++F+K GM P
Sbjct: 137 EEFMKRGMDP 146


>sp|SYDND_NATPD|ASPARTATE--TRNA(ASP/ASN) ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 KFLKFGMTP 10
K K+GM P
Sbjct: 389 KMFKYGMPP 397


>sp|SYFA_THEAC|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KFLKFGMTP 10
+ KFG+TP
Sbjct: 114 QLAKFGITP 122


>sp|HELS_METAR|ATP-DEPENDENT DNA helicase Hel308|Methanocella arvoryzae (strain DSM 22066

Query: 1 DKFLKFGMTP 10
D+FL+F P
Sbjct: 85 DRFLEFSKLP 94


>sp|LEUC_METJA|ISOPROPYLMALATE/CITRAMALATE isomerase large subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DKFLKFG 7
+KFLK+G
Sbjct: 351 EKFLKYG 357


>sp|CBID_PYRAE|COBALT-PRECORRIN-5B C(1)-methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DKFLKFGMT 9
+ FLK+G+T
Sbjct: 2 NPFLKYGIT 10


>sp|GSA_HALLT|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 KFGMTP 10
KFG+TP
Sbjct: 251 KFGVTP 256


>sp|SYFA_THEVO|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KFLKFGMTP 10
+ KFG+TP
Sbjct: 108 QLAKFGITP 116


>sp|SYDND_HALVO|ASPARTATE--TRNA(ASP/ASN) ligase|Haloferax volcanii (Halobacterium volcanii)

Query: 2 KFLKFGMTP 10
K K+GM P
Sbjct: 389 KMFKYGMPP 397


>sp|SYDND_HALMA|ASPARTATE--TRNA(ASP/ASN) ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 KFLKFGMTP 10
K K+GM P
Sbjct: 390 KMFKYGMPP 398


>sp|GSA_HALWD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloquadratum walsbyi (strain DSM 16790

Query: 5 KFGMTP 10
KFG+TP
Sbjct: 251 KFGVTP 256




102|Sequence|506|515|FGMTPSKGVL

>sp|SYFA_THEVO|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FGMTPSKGVL 10
FG+TP GVL
Sbjct: 112 FGITPKNGVL 121


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GMTPSKGVL 10
G+TP KG+L
Sbjct: 517 GVTPPKGIL 525


Query: 1 FGMTPSKGVL 10
G+ P KG+L
Sbjct: 241 LGIDPPKGIL 250


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FGMTPSKGVL 10
G+TP KGV+
Sbjct: 219 LGITPPKGVI 228


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 GMTPSKGVL 10
GM+ SKGVL
Sbjct: 605 GMSKSKGVL 613


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 2 GMTPSKGVL 10
G+TP++GVL
Sbjct: 1104 GLTPAEGVL 1112


>sp|SYFA_THEAC|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FGMTPSKGVL 10
FG+TP +G L
Sbjct: 118 FGITPKEGKL 127


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GMTPSKGVL 10
G++P KGVL
Sbjct: 183 GISPPKGVL 191


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 178 GIVPPKGVL 186


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 178 GIVPPKGVL 186


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 178 GIVPPKGVL 186


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 178 GIVPPKGVL 186


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 178 GIVPPKGVL 186


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 183 GINPPKGVL 191


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 FGMTPSKGVL 10
G+ P KGVL
Sbjct: 208 LGIEPPKGVL 217


Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 482 GVRPPKGVL 490


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FGMTPSKGVL 10
G+ P KGVL
Sbjct: 211 LGIEPPKGVL 220


>sp|LYSK_SULTO|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 MTPSKGVL 10
MTPS+G L
Sbjct: 216 MTPSEGYL 223


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 169 GIEPPKGVL 177


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 168 GIEPPKGVL 176


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 168 GIEPPKGVL 176


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 181 GIEPPKGVL 189


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 183 GIEPPKGVL 191


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 189 GIEPPKGVL 197


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 208 GIEPPKGVL 216


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 189 GIEPPKGVL 197


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 164 GIDPPKGVL 172


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 170 GIDPPKGVL 178


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 167 GIDPPKGVL 175


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 167 GIDPPKGVL 175


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 171 GIEPPKGVL 179


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 164 GVEPPKGVL 172


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 164 GVEPPKGVL 172


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 164 GVEPPKGVL 172


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 164 GVEPPKGVL 172


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 164 GVEPPKGVL 172


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 164 GVEPPKGVL 172


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 164 GVEPPKGVL 172


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 209 GVEPPKGVL 217


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 FGMTPSKGVL 10
G+ P KGVL
Sbjct: 168 LGIDPPKGVL 177


>sp|FOLD_PYRNV|BIFUNCTIONAL protein FolD|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 FGMTPSKGVL 10
FG+TP VL
Sbjct: 28 FGVTPKLAVL 37


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 2 GMTPSKGVL 10
G+ P KGVL
Sbjct: 189 GIEPPKGVL 197


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GMTPSKGVL 10
G+ P KG+L
Sbjct: 200 GIEPPKGIL 208


>sp|AMZA_METJA|ARCHAEMETZINCIN jannaschii (strain ATCC 43067

Query: 1 FGMTPSKGVL 10
+G+ P+K VL
Sbjct: 109 YGLPPNKDVL 118


>sp|HYD1A_PYRFU|SULFHYDROGENASE 1 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FGMTPSKGVL 10
FG P K VL
Sbjct: 169 FGKLPEKSVL 178


>sp|MTXX_METBF|PUTATIVE methyltransferase mtx subunit X|Methanosarcina barkeri (strain

Query: 1 FGMTPSKGVL 10
FG+ P GVL
Sbjct: 143 FGIEPRVGVL 152


>sp|DCD_PYRAE|DCTP deaminase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GMTPSKGV 9
G+TP KG+
Sbjct: 165 GVTPPKGL 172




103|Sequence|511|520|SKGVLFYGPP

>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 173 KGVLLYGPP 181


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 169 KGVLLYGPP 177


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 169 KGVLLYGPP 177


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 169 KGVLLYGPP 177


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 169 KGVLLYGPP 177


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 169 KGVLLYGPP 177


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 169 KGVLLYGPP 177


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 169 KGVLLYGPP 177


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 172 KGVLLYGPP 180


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 183 KGVLLYGPP 191


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 186 KGVLLYGPP 194


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 183 KGVLLYGPP 191


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 188 KGVLLYGPP 196


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 183 KGVLLYGPP 191


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 183 KGVLLYGPP 191


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 183 KGVLLYGPP 191


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 214 KGVLLYGPP 222


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 188 KGVLLYGPP 196


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 213 KGVLLYGPP 221


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 172 KGVLLYGPP 180


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 175 KGVLLYGPP 183


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 173 KGVLLYGPP 181


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 174 KGVLLYGPP 182


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 194 KGVLLYGPP 202


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 169 KGVLLYGPP 177


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 176 KGVLLYGPP 184


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KGVLFYGPP 10
KG+L YGPP
Sbjct: 205 KGILLYGPP 213


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SKGVLFYGPP 10
SKG L YGPP
Sbjct: 501 SKGFLLYGPP 510


Query: 2 KGVLFYGPP 10
KGV+ YGPP
Sbjct: 225 KGVILYGPP 233


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KGVLFYGPP 10
KGVL YGPP
Sbjct: 217 KGVLLYGPP 225


Query: 2 KGVLFYGPP 10
+G+L +GPP
Sbjct: 490 RGILLFGPP 498


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KGVLFYGPP 10
KG+L YGPP
Sbjct: 247 KGILLYGPP 255


Query: 2 KGVLFYGPP 10
KG+L +GPP
Sbjct: 522 KGILLFGPP 530


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KGVLFYGPP 10
K VLFYGPP
Sbjct: 155 KNVLFYGPP 163


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 2 KGVLFYGPP 10
KGVL +GPP
Sbjct: 487 KGVLLFGPP 495


Query: 2 KGVLFYGPP 10
KGVL GPP
Sbjct: 214 KGVLLVGPP 222


>sp|RFCL_SULAC|REPLICATION factor C large subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 SKGVLFYGPP 10
+K VL YGPP
Sbjct: 41 AKAVLLYGPP 50


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 3 GVLFYGPP 10
GVL YGPP
Sbjct: 188 GVLLYGPP 195


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 3 GVLFYGPP 10
GVL YGPP
Sbjct: 186 GVLLYGPP 193


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KGVLFYGPP 10
+G+L YGPP
Sbjct: 138 RGILVYGPP 146


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 KGVLFYGPP 10
KGVL +GPP
Sbjct: 188 KGVLLHGPP 196


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 3 GVLFYGPP 10
GVL YGPP
Sbjct: 498 GVLLYGPP 505


Query: 2 KGVLFYGPP 10
+GVL +GPP
Sbjct: 224 QGVLLHGPP 232


>sp|RFCL_SULTO|REPLICATION factor C large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KGVLFYGPP 10
K VL YGPP
Sbjct: 42 KAVLLYGPP 50


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 2 KGVLFYGPP 10
KGVL +GPP
Sbjct: 174 KGVLLHGPP 182


>sp|RFCS_PYRCJ|REPLICATION factor C small subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 VLFYGPP 10
+LFYGPP
Sbjct: 40 LLFYGPP 46


>sp|RFCS2_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 4 VLFYGPP 10
+LFYGPP
Sbjct: 40 LLFYGPP 46


>sp|RFCS2_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 VLFYGPP 10
+LFYGPP
Sbjct: 40 LLFYGPP 46


>sp|RFCS2_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 VLFYGPP 10
+LFYGPP
Sbjct: 40 LLFYGPP 46


>sp|RFCS1_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 4 VLFYGPP 10
+LFYGPP
Sbjct: 40 LLFYGPP 46


>sp|RFCS1_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 VLFYGPP 10
+LFYGPP
Sbjct: 40 LLFYGPP 46


>sp|RFCS1_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 VLFYGPP 10
+LFYGPP
Sbjct: 40 LLFYGPP 46


>sp|RFCL_NANEQ|REPLICATION factor C large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 KGVLFYGPP 10
K +L YGPP
Sbjct: 69 KALLLYGPP 77


>sp|RFCL_THEPD|REPLICATION factor C large subunit|Thermofilum pendens (strain DSM 2475

Query: 2 KGVLFYGPP 10
K L YGPP
Sbjct: 48 KAALLYGPP 56


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 3 GVLFYGPP 10
GVL +GPP
Sbjct: 188 GVLLHGPP 195


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 3 GVLFYGPP 10
GVL +GPP
Sbjct: 184 GVLLHGPP 191


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KGVLFYGPP 10
KGVL YG P
Sbjct: 194 KGVLLYGLP 202


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KGVLFYGPP 10
KGVL YG P
Sbjct: 194 KGVLLYGLP 202


>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 2 KGVLFYGP 9
K LFYGP
Sbjct: 45 KAALFYGP 52


>sp|LYSK_SULAC|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KGVLFYGP 9
KG+L YGP
Sbjct: 303 KGILAYGP 310


>sp|RFCL_AERPE|REPLICATION factor C large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 KGVLFYGPP 10
+ L YGPP
Sbjct: 50 RAALLYGPP 58


>sp|RADB_METTH|DNA repair and recombination protein|Methanothermobacter

Query: 6 FYGPP 10
FYGPP
Sbjct: 35 FYGPP 39


>sp|RADB_METST|DNA repair and recombination protein|Methanosphaera stadtmanae

Query: 6 FYGPP 10
FYGPP
Sbjct: 35 FYGPP 39


>sp|Y2061_THEKO|PUTATIVE phosphate permease TK2061|Thermococcus kodakarensis (strain ATCC

Query: 3 GVLFYGPP 10
GVLFYG P
Sbjct: 208 GVLFYGIP 215


>sp|METE_THEAC|METHIONINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KGVLFYG 8
KG++FYG
Sbjct: 74 KGIIFYG 80


>sp|METE_SACI7|METHIONINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 KGVLFYGP 9
KG FYGP
Sbjct: 80 KGFKFYGP 87


>sp|METE_SACI6|METHIONINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 KGVLFYGP 9
KG FYGP
Sbjct: 80 KGFKFYGP 87


>sp|METE_SACI4|METHIONINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 KGVLFYGP 9
KG FYGP
Sbjct: 80 KGFKFYGP 87


>sp|METE_SACI3|METHIONINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 KGVLFYGP 9
KG FYGP
Sbjct: 80 KGFKFYGP 87


>sp|METE_SACI2|METHIONINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 KGVLFYGP 9
KG FYGP
Sbjct: 80 KGFKFYGP 87


>sp|METE_SACI1|METHIONINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 KGVLFYGP 9
KG FYGP
Sbjct: 80 KGFKFYGP 87


>sp|METE_PYRFU|METHIONINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KGVLFYGP 9
KG FYGP
Sbjct: 79 KGFKFYGP 86


>sp|METE_SACS2|METHIONINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KGVLFYGP 9
KG FYGP
Sbjct: 80 KGFKFYGP 87


>sp|METE_THEVO|METHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KGVLFYG 8
KG++FYG
Sbjct: 74 KGLIFYG 80


>sp|SRP54_HYPBU|SIGNAL recognition particle 54 kDa|Hyperthermus butylicus (strain DSM 5456

Query: 3 GVLFYGPP 10
G +FYG P
Sbjct: 153 GAMFYGEP 160


>sp|SYS2_META3|TYPE-2 serine--tRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 KGVLFYGPP 10
KG FY PP
Sbjct: 217 KGQWFYTPP 225


>sp|CYNS_SULTO|CYANATE hydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KGVLFYGP 9
+GVL YGP
Sbjct: 92 EGVLLYGP 99


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KGVLFYGPP 10
K V+FYG P
Sbjct: 377 KYVIFYGVP 385


>sp|KAE1_METAR|TRNA N6-adenosine threonylcarbamoyltransferase|Methanocella arvoryzae

Query: 2 KGVLFYGPP 10
+G FY PP
Sbjct: 269 RGAKFYAPP 277


>sp|RFCL_METB6|REPLICATION factor C large subunit|Methanoregula boonei (strain DSM 21154

Query: 1 SKGVLFYGPP 10
SK +L YG P
Sbjct: 36 SKPLLLYGKP 45


>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 VLFYGPP 10
+LF GPP
Sbjct: 384 LLFVGPP 390


>sp|PYRB_METST|ASPARTATE carbamoyltransferase catalytic subunit|Methanosphaera stadtmanae

Query: 3 GVLFYGP 9
GV+FY P
Sbjct: 48 GVMFYEP 54


>sp|PAN2_METTM|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter marburgensis (strain ATCC

Query: 2 KGVLFYGPP 10
+ VLF+G P
Sbjct: 158 RNVLFHGSP 166


>sp|PAN2_METTH|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 KGVLFYGPP 10
+ VLF+G P
Sbjct: 158 RNVLFHGSP 166


>sp|Y2001_PYRHO|UNCHARACTERIZED protein PH2001|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SKGVLFYGP 9
+ G+LF GP
Sbjct: 9 TTGILFLGP 17


>sp|RUVB_METHJ|HOLLIDAY junction branch migration complex|Methanospirillum hungatei JF-1

Query: 4 VLFYGPP 10
+LF GPP
Sbjct: 55 ILFSGPP 61


>sp|RUVB_METB6|HOLLIDAY junction branch migration complex|Methanoregula boonei (strain

Query: 4 VLFYGPP 10
+LF GPP
Sbjct: 55 ILFAGPP 61


>sp|Y1062_METJA|UNCHARACTERIZED protein MJ1062|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SKGVLFYGP 9
+K + FYGP
Sbjct: 136 NKTLYFYGP 144


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KGVLFYGP 9
KG L YGP
Sbjct: 728 KGELIYGP 735


>sp|KAE1_PYRFU|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus furiosus

Query: 2 KGVLFYGPP 10
+GV F+ PP
Sbjct: 271 RGVKFFVPP 279


>sp|KAE1_PYRHO|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus horikoshii

Query: 2 KGVLFYGPP 10
+GV F+ PP
Sbjct: 271 RGVKFFVPP 279


>sp|SUDHA_PYRFU|SULFIDE dehydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GVLFYGPP 10
GVL YG P
Sbjct: 191 GVLIYGIP 198


>sp|MCRA_METAC|METHYL-COENZYME M reductase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 2 KGVLFYGP 9
+G+ FY P
Sbjct: 63 RGIAFYNP 70


>sp|KAE1_ARCFU|TRNA N6-adenosine threonylcarbamoyltransferase|Archaeoglobus fulgidus

Query: 2 KGVLFYGPP 10
+G FY PP
Sbjct: 269 RGAKFYVPP 277


>sp|PELO_METLZ|PROTEIN pelota homolog|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 GVLFYGP 9
GV+ YGP
Sbjct: 87 GVISYGP 93


>sp|TRMY_THEGJ|TRNA (pseudouridine(54)-N(1))-methyltransferase|Thermococcus

Query: 4 VLFYGPP 10
+L YGPP
Sbjct: 54 LLLYGPP 60


>sp|MCRA_METBF|METHYL-COENZYME M reductase subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 2 KGVLFYGP 9
+G+ FY P
Sbjct: 63 RGIAFYNP 70


>sp|GUAAA_PYRFU|GMP synthase [glutamine-hydrolyzing] subunit A|Pyrococcus furiosus

Query: 2 KGVLFYGPP 10
KG++F G P
Sbjct: 44 KGIIFSGGP 52


>sp|GUAAA_THEKO|GMP synthase [glutamine-hydrolyzing] subunit A|Thermococcus

Query: 2 KGVLFYGPP 10
KG++F G P
Sbjct: 44 KGIIFSGGP 52


>sp|TRPA_SULTO|TRYPTOPHAN synthase alpha chain|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KGVLFYGP 9
K VLF GP
Sbjct: 133 KAVLFTGP 140


>sp|SYS2_METTH|TYPE-2 serine--tRNA ligase|Methanothermobacter thermautotrophicus (strain

Query: 2 KGVLFYGP 9
+G FYGP
Sbjct: 210 RGQWFYGP 217


>sp|Y1472_METJA|UNCHARACTERIZED protein MJ1472|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GVLFYGPP 10
G ++YG P
Sbjct: 498 GTIYYGEP 505


>sp|Y409_METJA|UNCHARACTERIZED protein MJ0409|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SKGVLFYGPP 10
G L Y PP
Sbjct: 109 ENGALIYNPP 118




104|Sequence|516|525|FYGPPGCGKT

>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 1 FYGPPGCGKT 10
YGPPGCGKT
Sbjct: 178 LYGPPGCGKT 187


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FYGPPGCGKT 10
YGPPGCGKT
Sbjct: 177 LYGPPGCGKT 186


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 FYGPPGCGKT 10
YGPPGCGKT
Sbjct: 177 LYGPPGCGKT 186


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FYGPPGCGKT 10
YGPPGCGKT
Sbjct: 179 LYGPPGCGKT 188


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FYGPPGCGKT 10
YGPPGCGKT
Sbjct: 176 LYGPPGCGKT 185


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 FYGPPGCGKT 10
YGPPGCGKT
Sbjct: 176 LYGPPGCGKT 185


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YGPPGCGKT 10
YGPPGCGKT
Sbjct: 143 YGPPGCGKT 151


>sp|RFCS_PYRCJ|REPLICATION factor C small subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 FYGPPGCGKT 10
FYGPPG GKT
Sbjct: 42 FYGPPGTGKT 51


>sp|RFCS2_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FYGPPGCGKT 10
FYGPPG GKT
Sbjct: 42 FYGPPGTGKT 51


>sp|RFCS2_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 FYGPPGCGKT 10
FYGPPG GKT
Sbjct: 42 FYGPPGTGKT 51


>sp|RFCS2_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FYGPPGCGKT 10
FYGPPG GKT
Sbjct: 42 FYGPPGTGKT 51


>sp|RFCS1_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FYGPPGCGKT 10
FYGPPG GKT
Sbjct: 42 FYGPPGTGKT 51


>sp|RFCS1_PYRAR|REPLICATION factor C small subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 FYGPPGCGKT 10
FYGPPG GKT
Sbjct: 42 FYGPPGTGKT 51


>sp|RFCS1_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FYGPPGCGKT 10
FYGPPG GKT
Sbjct: 42 FYGPPGTGKT 51


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FYGPPGCGKT 10
FYGPPG GKT
Sbjct: 159 FYGPPGTGKT 168


>sp|RADB_METTH|DNA repair and recombination protein|Methanothermobacter

Query: 1 FYGPPGCGKT 10
FYGPPG GKT
Sbjct: 35 FYGPPGSGKT 44


>sp|RADB_METST|DNA repair and recombination protein|Methanosphaera stadtmanae

Query: 1 FYGPPGCGKT 10
FYGPPG GKT
Sbjct: 35 FYGPPGSGKT 44


>sp|RFCL_METJA|REPLICATION factor C large subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 3 GPPGCGKT 10
GPPGCGKT
Sbjct: 46 GPPGCGKT 53


>sp|RFCL_META3|REPLICATION factor C large subunit|Methanococcus aeolicus (strain ATCC

Query: 3 GPPGCGKT 10
GPPGCGKT
Sbjct: 45 GPPGCGKT 52


>sp|RFCL_STAMF|REPLICATION factor C large subunit|Staphylothermus marinus (strain ATCC 43588

Query: 1 FYGPPGCGKT 10
YGP GCGKT
Sbjct: 48 LYGPAGCGKT 57


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 506 LYGPPGVGKT 515


Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 229 LYGPPGTGKT 238


>sp|RFCL_SULTO|REPLICATION factor C large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 46 LYGPPGVGKT 55


>sp|RFCL_SULAC|REPLICATION factor C large subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 46 LYGPPGVGKT 55


>sp|RFCL_METTP|REPLICATION factor C large subunit|Methanothrix thermoacetophila (strain DSM

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 45 LYGPPGVGKT 54


>sp|RFCL_AERPE|REPLICATION factor C large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 54 LYGPPGVGKT 63


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 221 LYGPPGTGKT 230


Query: 1 FYGPPGCGKT 10
+GPPG GKT
Sbjct: 494 LFGPPGTGKT 503


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 251 LYGPPGTGKT 260


Query: 1 FYGPPGCGKT 10
+GPPG GKT
Sbjct: 526 LFGPPGTGKT 535


>sp|RFCL_NANEQ|REPLICATION factor C large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 73 LYGPPGTGKT 82


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 173 LYGPPGTGKT 182


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 173 LYGPPGTGKT 182


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 173 LYGPPGTGKT 182


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 173 LYGPPGTGKT 182


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 173 LYGPPGTGKT 182


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 173 LYGPPGTGKT 182


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 173 LYGPPGTGKT 182


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 173 LYGPPGTGKT 182


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 187 LYGPPGTGKT 196


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 190 LYGPPGTGKT 199


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 187 LYGPPGTGKT 196


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 192 LYGPPGTGKT 201


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 187 LYGPPGTGKT 196


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 187 LYGPPGTGKT 196


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 187 LYGPPGTGKT 196


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 218 LYGPPGTGKT 227


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 209 LYGPPGTGKT 218


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 192 LYGPPGTGKT 201


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 217 LYGPPGTGKT 226


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 198 LYGPPGTGKT 207


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 180 LYGPPGTGKT 189


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 191 LYGPPGTGKT 200


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 189 LYGPPGTGKT 198


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 501 LYGPPGTGKT 510


Query: 1 FYGPPGCGKT 10
+GPPG GKT
Sbjct: 228 LHGPPGTGKT 237


>sp|RFCL_THEPD|REPLICATION factor C large subunit|Thermofilum pendens (strain DSM 2475

Query: 1 FYGPPGCGKT 10
YGPPG GKT
Sbjct: 52 LYGPPGSGKT 61


>sp|RADB_METMP|DNA repair and recombination protein|Methanococcus maripaludis

Query: 2 YGPPGCGKT 10
YGPPG GKT
Sbjct: 19 YGPPGVGKT 27


>sp|RADB_METMI|DNA repair and recombination protein|Methanococcus maripaludis

Query: 2 YGPPGCGKT 10
YGPPG GKT
Sbjct: 19 YGPPGVGKT 27


>sp|RADB_METM7|DNA repair and recombination protein|Methanococcus maripaludis

Query: 2 YGPPGCGKT 10
YGPPG GKT
Sbjct: 19 YGPPGVGKT 27


>sp|RADB_METM5|DNA repair and recombination protein|Methanococcus maripaludis

Query: 2 YGPPGCGKT 10
YGPPG GKT
Sbjct: 19 YGPPGVGKT 27


>sp|RADB_METJA|DNA repair and recombination protein|Methanocaldococcus jannaschii

Query: 2 YGPPGCGKT 10
YGPPG GKT
Sbjct: 19 YGPPGVGKT 27


>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 FYGPPGCGKT 10
F GPPG GKT
Sbjct: 386 FVGPPGTGKT 395


>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 1 FYGPPGCGKT 10
F GPPG GKT
Sbjct: 279 FVGPPGSGKT 288


>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 1 FYGPPGCGKT 10
FYGP G GKT
Sbjct: 49 FYGPAGVGKT 58


>sp|RFCS_METMA|REPLICATION factor C small subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FYGPPGCGKT 10
F GPPG GKT
Sbjct: 51 FSGPPGVGKT 60


>sp|RFCS_METBF|REPLICATION factor C small subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 FYGPPGCGKT 10
F GPPG GKT
Sbjct: 47 FSGPPGVGKT 56


>sp|RFCS_METAR|REPLICATION factor C small subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 FYGPPGCGKT 10
F GPPG GKT
Sbjct: 43 FSGPPGVGKT 52


>sp|RFCS_METAC|REPLICATION factor C small subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 FYGPPGCGKT 10
F GPPG GKT
Sbjct: 51 FSGPPGVGKT 60


>sp|RFCS_SULTO|REPLICATION factor C small subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FYGPPGCGKT 10
F GPPG GKT
Sbjct: 45 FSGPPGTGKT 54


>sp|RFCS_ARCFU|REPLICATION factor C small subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FYGPPGCGKT 10
F GPPG GKT
Sbjct: 43 FSGPPGTGKT 52


>sp|KCY_DESA1|CYTIDYLATE kinase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 FYGPPGCGKT 10
F GPPG GKT
Sbjct: 6 FSGPPGSGKT 15


>sp|RFCS_THEPD|REPLICATION factor C small subunit|Thermofilum pendens (strain DSM 2475

Query: 1 FYGPPGCGKT 10
F GPPG GKT
Sbjct: 42 FAGPPGTGKT 51


>sp|RFCS_SULAC|REPLICATION factor C small subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 FYGPPGCGKT 10
F GPPG GKT
Sbjct: 43 FAGPPGTGKT 52


>sp|RFCS_STAMF|REPLICATION factor C small subunit|Staphylothermus marinus (strain ATCC 43588

Query: 1 FYGPPGCGKT 10
F GPPG GKT
Sbjct: 49 FAGPPGTGKT 58


>sp|RFCS_SACS2|REPLICATION factor C small subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 FYGPPGCGKT 10
F GPPG GKT
Sbjct: 46 FAGPPGTGKT 55


>sp|RFCS_NANEQ|REPLICATION factor C small subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 FYGPPGCGKT 10
F GPPG GKT
Sbjct: 40 FAGPPGTGKT 49


>sp|RFCS_METKA|REPLICATION factor C small subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 FYGPPGCGKT 10
F GPPG GKT
Sbjct: 49 FAGPPGTGKT 58


>sp|RFCS_AERPE|REPLICATION factor C small subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 FYGPPGCGKT 10
F GPPG GKT
Sbjct: 45 FAGPPGTGKT 54


>sp|RUVB_METHJ|HOLLIDAY junction branch migration complex|Methanospirillum hungatei JF-1

Query: 1 FYGPPGCGKT 10
F GPPG GKT
Sbjct: 57 FSGPPGLGKT 66


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 FYGPPGCGKT 10
+GPPG GKT
Sbjct: 491 LFGPPGTGKT 500


Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 220 GPPGTGKT 227


>sp|RFCL_METVS|REPLICATION factor C large subunit|Methanococcus vannielii (strain ATCC 35089

Query: 1 FYGPPGCGKT 10
+GPPG GKT
Sbjct: 44 LFGPPGSGKT 53


>sp|RUVB_METB6|HOLLIDAY junction branch migration complex|Methanoregula boonei (strain

Query: 1 FYGPPGCGKT 10
F GPPG GKT
Sbjct: 57 FAGPPGLGKT 66


>sp|RFCL_IGNH4|REPLICATION factor C large subunit|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 FYGPPGCGKT 10
+GPPG GKT
Sbjct: 48 LWGPPGVGKT 57


>sp|RFCL_PYRCJ|REPLICATION factor C large subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 FYGPPGCGKT 10
+GPPG GKT
Sbjct: 61 LWGPPGIGKT 70


>sp|RFCL_SACS2|REPLICATION factor C large subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 FYGPPGCGKT 10
+GPPG GKT
Sbjct: 45 LHGPPGVGKT 54


>sp|RFCL_SACI7|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 FYGPPGCGKT 10
+GPPG GKT
Sbjct: 45 LHGPPGVGKT 54


>sp|RFCL_SACI6|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 1 FYGPPGCGKT 10
+GPPG GKT
Sbjct: 45 LHGPPGVGKT 54


>sp|RFCL_SACI4|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 1 FYGPPGCGKT 10
+GPPG GKT
Sbjct: 45 LHGPPGVGKT 54


>sp|RFCL_SACI3|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.27)

Query: 1 FYGPPGCGKT 10
+GPPG GKT
Sbjct: 45 LHGPPGVGKT 54


>sp|RFCL_SACI2|REPLICATION factor C large subunit|Saccharolobus islandicus (strain L.S.2.15

Query: 1 FYGPPGCGKT 10
+GPPG GKT
Sbjct: 45 LHGPPGVGKT 54


>sp|RFCL_SACI1|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 FYGPPGCGKT 10
+GPPG GKT
Sbjct: 45 LHGPPGVGKT 54


>sp|RFCL_METKA|REPLICATION factor C large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 FYGPPGCGKT 10
+GPPG GKT
Sbjct: 46 LHGPPGTGKT 55


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 FYGPPGCGKT 10
+GPPG GKT
Sbjct: 192 LHGPPGTGKT 201


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 FYGPPGCGKT 10
+GPPG GKT
Sbjct: 178 LHGPPGTGKT 187


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 FYGPPGCGKT 10
+GPPG GKT
Sbjct: 191 LHGPPGTGKT 200


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 FYGPPGCGKT 10
+GPPG GKT
Sbjct: 187 LHGPPGTGKT 196


>sp|RADB_HALSA|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 1 FYGPPGCGKT 10
YGPP GKT
Sbjct: 31 LYGPPAAGKT 40


>sp|RADB_HALS3|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 1 FYGPPGCGKT 10
YGPP GKT
Sbjct: 31 LYGPPAAGKT 40


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii (strain

Query: 2 YGPPGCGKT 10
+GPPG GKT
Sbjct: 206 HGPPGTGKT 214


>sp|Y412_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 3 GPPGCGKT 10
GP GCGKT
Sbjct: 53 GPSGCGKT 60


>sp|MALK_THELN|TREHALOSE/MALTOSE import ATP-binding protein MalK|Thermococcus litoralis (strain

Query: 3 GPPGCGKT 10
GP GCGKT
Sbjct: 36 GPSGCGKT 43


>sp|GVPN_HALMT|GAS vesicle ATPase GvpN|Haloferax mediterranei (strain ATCC 33500

Query: 3 GPPGCGKT 10
GP GCGKT
Sbjct: 91 GPTGCGKT 98


>sp|GVPN2_HALSA|GAS vesicle ATPase GvpN2|Halobacterium salinarum (strain ATCC 700922

Query: 3 GPPGCGKT 10
GP GCGKT
Sbjct: 89 GPTGCGKT 96


>sp|GVPN1_HALSA|GAS vesicle ATPase GvpN1|Halobacterium salinarum (strain ATCC 700922

Query: 3 GPPGCGKT 10
GP GCGKT
Sbjct: 91 GPTGCGKT 98


>sp|RFCL_THEKO|REPLICATION factor C large subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 50 GPPGVGKT 57


>sp|RFCL_PYRAR|REPLICATION factor C large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 63 GPPGVGKT 70


>sp|RFCL_PYRAE|REPLICATION factor C large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 63 GPPGVGKT 70


>sp|RFCL_ARCFU|REPLICATION factor C large subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 43 GPPGVGKT 50


>sp|NTPTH_CALMQ|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 9 GPPGVGKT 16


>sp|RFCL_METTH|REPLICATION factor C large subunit|Methanothermobacter thermautotrophicus

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 45 GPPGTGKT 52


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 363 GPPGTGKT 370


>sp|CDC6C_HALMA|ORC1-TYPE DNA replication protein 3|Haloarcula marismortui (strain ATCC

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 62 GPPGTGKT 69


>sp|CDC66_HALSA|ORC1-TYPE DNA replication protein 6|Halobacterium salinarum (strain ATCC

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 62 GPPGTGKT 69


>sp|CDC62_METMA|ORC1-TYPE DNA replication protein 2|Methanosarcina mazei (strain ATCC

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 59 GPPGTGKT 66


>sp|CDC62_METAC|ORC1-TYPE DNA replication protein 2|Methanosarcina acetivorans (strain ATCC

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 59 GPPGTGKT 66


>sp|RFCL_PYRHO|REPLICATION factor C large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 50 GPPGSGKT 57


>sp|RFCL_PYRFU|REPLICATION factor C large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 50 GPPGSGKT 57


>sp|RFCL_PYRAB|REPLICATION factor C large subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 50 GPPGSGKT 57


>sp|RFCL_METMP|REPLICATION factor C large subunit|Methanococcus maripaludis (strain DSM

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 46 GPPGSGKT 53


>sp|RFCL_METM7|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C7 /

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 46 GPPGSGKT 53


>sp|RFCL_METM6|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C6 /

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 46 GPPGSGKT 53


>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 46 GPPGSGKT 53


>sp|RAD25_HALSA|PUTATIVE DNA 3'-5' helicase Rad25|Halobacterium salinarum (strain ATCC

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 266 GPPGSGKT 273


>sp|PSTK_METKA|L-SERYL-TRNA(SEC) kinase|Methanopyrus kandleri (strain AV19 /

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 8 GPPGSGKT 15


>sp|KCY_SACS2|CYTIDYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 7 GPPGSGKT 14


>sp|KCY_SACI7|CYTIDYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 7 GPPGSGKT 14


>sp|KCY_SACI6|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 7 GPPGSGKT 14


>sp|KCY_SACI4|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 7 GPPGSGKT 14


>sp|KCY_SACI3|CYTIDYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 7 GPPGSGKT 14


>sp|KCY_SACI2|CYTIDYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 7 GPPGSGKT 14


>sp|KCY_SACI1|CYTIDYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 7 GPPGSGKT 14


>sp|CDC6Z_METTF|ORC1-TYPE DNA replication protein|Methanothermobacter thermautotrophicus

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 54 GPPGSGKT 61


>sp|CDC6V_METTF|ORC1-TYPE DNA replication protein|Methanothermobacter thermautotrophicus

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 54 GPPGSGKT 61


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FYGPPGCGK 9
F GPPG GK
Sbjct: 45 FSGPPGVGK 53


>sp|RFCS_THEKO|REPLICATION factor C small subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 FYGPPGCGK 9
F GPPG GK
Sbjct: 51 FAGPPGVGK 59


>sp|RFCS_PYRHO|REPLICATION factor C small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FYGPPGCGK 9
F GPPG GK
Sbjct: 53 FAGPPGVGK 61


>sp|RFCS_PYRFU|REPLICATION factor C small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FYGPPGCGK 9
F GPPG GK
Sbjct: 51 FAGPPGVGK 59


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 FYGPPGCGK 9
F GPPG GK
Sbjct: 53 FAGPPGVGK 61


>sp|RADB_METS3|DNA repair and recombination protein|Methanobrevibacter smithii

Query: 2 YGPPGCGKT 10
+GPPG GK+
Sbjct: 36 FGPPGSGKS 44


>sp|KAD_THESM|ADENYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 2 YGPPGCGKT 10
+GPPG GK+
Sbjct: 6 FGPPGSGKS 14


>sp|KAD_THEON|ADENYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 2 YGPPGCGKT 10
+GPPG GK+
Sbjct: 6 FGPPGSGKS 14


>sp|KAD_THEKO|ADENYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 YGPPGCGKT 10
+GPPG GK+
Sbjct: 6 FGPPGSGKS 14


>sp|RFCL_PYRNV|REPLICATION factor C large subunit|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 63 GPPGIGKT 70


>sp|RFCL_PYRIL|REPLICATION factor C large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 63 GPPGIGKT 70


>sp|RFCL_METST|REPLICATION factor C large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 45 GPPGIGKT 52


>sp|RFCL_METS3|REPLICATION factor C large subunit|Methanobrevibacter smithii (strain ATCC

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 45 GPPGIGKT 52


>sp|PAN2_METTM|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter marburgensis (strain ATCC

Query: 1 FYGPPGCGKT 10
F+G PG GKT
Sbjct: 162 FHGSPGTGKT 171


>sp|PAN2_METTH|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 FYGPPGCGKT 10
F+G PG GKT
Sbjct: 162 FHGSPGTGKT 171


>sp|KAD_THEGJ|ADENYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 YGPPGCGKT 10
+GPPG GK+
Sbjct: 6 FGPPGSGKS 14


>sp|KAD_PYRFU|ADENYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YGPPGCGKT 10
+GPPG GK+
Sbjct: 6 FGPPGSGKS 14


>sp|KAD_ARCFU|ADENYLATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FYGPPGCGK 9
F GPPG GK
Sbjct: 5 FLGPPGAGK 13


>sp|KAD_METAR|ADENYLATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 FYGPPGCGK 9
+GPPG GK
Sbjct: 5 LFGPPGAGK 13


>sp|CDC61_HALSA|ORC1-TYPE DNA replication protein 1|Halobacterium salinarum (strain ATCC

Query: 1 FYGPPGCGKT 10
YGP G GKT
Sbjct: 45 LYGPSGVGKT 54


>sp|RFCL_METMJ|REPLICATION factor C large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 FYGPPGCGKT 10
YG PG GKT
Sbjct: 41 LYGKPGTGKT 50


>sp|RFCL_METAC|REPLICATION factor C large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 FYGPPGCGKT 10
YGP G GKT
Sbjct: 53 LYGPAGIGKT 62


>sp|RFCL_HALMA|REPLICATION factor C large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 FYGPPGCGKT 10
YG PG GKT
Sbjct: 41 LYGSPGIGKT 50


>sp|KAD_PYRAB|ADENYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 YGPPGCGKT 10
+GPPG GK+
Sbjct: 6 FGPPGSGKS 14


>sp|KAD_PYRHO|ADENYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YGPPGCGKT 10
+GPPG GK+
Sbjct: 6 FGPPGSGKS 14


>sp|KCY_STAMF|CYTIDYLATE kinase|Staphylothermus marinus (strain ATCC 43588

Query: 3 GPPGCGKT 10
GPPG GKT
Sbjct: 8 GPPGGGKT 15


>sp|RFCL_METHJ|REPLICATION factor C large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 FYGPPGCGKT 10
YG PG GKT
Sbjct: 41 LYGKPGIGKT 50


>sp|RFCL_METB6|REPLICATION factor C large subunit|Methanoregula boonei (strain DSM 21154

Query: 1 FYGPPGCGKT 10
YG PG GKT
Sbjct: 41 LYGKPGIGKT 50


>sp|KAD_METMA|ADENYLATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FYGPPGCGK 9
+GPPG GK
Sbjct: 5 LFGPPGAGK 13


>sp|KAD_METBF|ADENYLATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 FYGPPGCGK 9
+GPPG GK
Sbjct: 5 LFGPPGAGK 13


>sp|CDC6_CENSY|ORC1-TYPE DNA replication protein|Cenarchaeum symbiosum (strain A)

Query: 2 YGPPGCGKT 10
YG PG GKT
Sbjct: 73 YGKPGTGKT 81


>sp|CDC6H_HALMA|ORC1-TYPE DNA replication protein 8|Haloarcula marismortui (strain ATCC

Query: 2 YGPPGCGKT 10
YGP G GKT
Sbjct: 61 YGPTGVGKT 69


>sp|RFCL_PICTO|REPLICATION factor C large subunit|Picrophilus torridus (strain ATCC 700027

Query: 1 FYGPPGCGKT 10
YG PG GKT
Sbjct: 44 LYGDPGTGKT 53


>sp|Y3016_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 45 GPSGCGKS 52


>sp|Y1508_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 38 GPSGCGKS 45


>sp|XACK_HALVD|XYLOSE/ARABINOSE import ATP-binding protein XacK|Haloferax volcanii (strain ATCC

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 41 GPSGCGKS 48


>sp|XACJ_HALVD|XYLOSE/ARABINOSE import ATP-binding protein XacJ|Haloferax volcanii (strain ATCC

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 36 GPSGCGKS 43


>sp|PSTB_THEKO|PHOSPHATE import ATP-binding protein PstB|Thermococcus kodakarensis (strain

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 37 GPSGCGKS 44


>sp|PSTB_PYRFU|PHOSPHATE import ATP-binding protein PstB|Pyrococcus furiosus (strain ATCC

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 37 GPSGCGKS 44


>sp|PSTB_PYRAB|PHOSPHATE import ATP-binding protein PstB|Pyrococcus abyssi (strain GE5 /

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 38 GPSGCGKS 45


>sp|PSTB_METTH|PHOSPHATE import ATP-binding protein PstB|Methanothermobacter

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 39 GPSGCGKS 46


>sp|PSTB_METST|PHOSPHATE import ATP-binding protein PstB|Methanosphaera stadtmanae (strain

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 38 GPSGCGKS 45


>sp|PSTB_METMP|PHOSPHATE import ATP-binding protein PstB|Methanococcus maripaludis (strain

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 37 GPSGCGKS 44


>sp|PSTB_METMA|PHOSPHATE import ATP-binding protein PstB|Methanosarcina mazei (strain ATCC

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 45 GPSGCGKS 52


>sp|PSTB_METKA|PHOSPHATE import ATP-binding protein PstB|Methanopyrus kandleri (strain

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 36 GPSGCGKS 43


>sp|PSTB_METJA|PHOSPHATE import ATP-binding protein PstB|Methanocaldococcus jannaschii

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 38 GPSGCGKS 45


>sp|PSTB_METBU|PHOSPHATE import ATP-binding protein PstB|Methanococcoides burtonii (strain

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 42 GPSGCGKS 49


>sp|PSTB_METBF|PHOSPHATE import ATP-binding protein PstB|Methanosarcina barkeri (strain

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 45 GPSGCGKS 52


>sp|PSTB_METAC|PHOSPHATE import ATP-binding protein PstB|Methanosarcina acetivorans

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 45 GPSGCGKS 52


>sp|PSTB_HALWD|PHOSPHATE import ATP-binding protein PstB|Haloquadratum walsbyi (strain DSM

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 80 GPSGCGKS 87


>sp|PSTB_ARCFU|PHOSPHATE import ATP-binding protein PstB|Archaeoglobus fulgidus (strain

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 37 GPSGCGKS 44


>sp|PSTB3_NATPD|PHOSPHATE import ATP-binding protein PstB|Natronomonas pharaonis (strain

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 63 GPSGCGKS 70


>sp|PSTB2_HALSA|PHOSPHATE import ATP-binding protein PstB|Halobacterium salinarum (strain

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 118 GPSGCGKS 125


>sp|PSTB2_HALMA|PHOSPHATE import ATP-binding protein PstB|Haloarcula marismortui (strain

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 86 GPSGCGKS 93


>sp|PSTB1_NATPD|PHOSPHATE import ATP-binding protein PstB|Natronomonas pharaonis (strain

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 70 GPSGCGKS 77


>sp|PSTB1_HALSA|PHOSPHATE import ATP-binding protein PstB|Halobacterium salinarum (strain

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 68 GPSGCGKS 75


>sp|PSTB1_HALMA|PHOSPHATE import ATP-binding protein PstB|Haloarcula marismortui (strain

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 86 GPSGCGKS 93


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 45 GPSGCGKS 52


>sp|PSTB_METHJ|PHOSPHATE import ATP-binding protein PstB|Methanospirillum hungatei JF-1

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 39 GPSGCGKS 46


>sp|KAD_METAC|ADENYLATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FYGPPGCGK 9
+GPPG GK
Sbjct: 5 LFGPPGAGK 13


>sp|RFCL_METMA|REPLICATION factor C large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FYGPPGCGKT 10
YGP G GKT
Sbjct: 53 LYGPAGIGKT 62


>sp|Y870_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 44 GPTGCGKS 51


>sp|Y1996_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 3 GPPGCGKT 10
GP GCGK+
Sbjct: 44 GPTGCGKS 51


>sp|Y274_PYRHO|PUTATIVE GTPase PH0274|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 54 GPPGAGKS 61


>sp|Y249_PYRAB|PUTATIVE GTPase PYRAB02490|Pyrococcus abyssi (strain GE5 /

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 52 GPPGAGKS 59


>sp|KCY_HALWD|CYTIDYLATE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 7 GPPGAGKS 14


>sp|KAD6_THEVO|PUTATIVE adenylate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 9 GPPGAGKS 16


>sp|CFBD_METAC|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina acetivorans

Query: 1 FYGPPGC 7
+GPPGC
Sbjct: 33 LHGPPGC 39


>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii (strain

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 291 GPPGSGKS 298


>sp|KCY_SULTO|CYTIDYLATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 7 GPPGSGKS 14


>sp|KCY_SULAC|CYTIDYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 7 GPPGSGKS 14


>sp|KCY_IGNH4|CYTIDYLATE kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 8 GPPGSGKS 15


>sp|KCY_HALSA|CYTIDYLATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 7 GPPGSGKS 14


>sp|KCY_HALS3|CYTIDYLATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 7 GPPGSGKS 14


>sp|KCY_HALLT|CYTIDYLATE kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 7 GPPGSGKS 14


>sp|KCY_AERPE|CYTIDYLATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 4 GPPGSGKS 11


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FYGPPGCGKT 10
YG PG GKT
Sbjct: 198 LYGLPGTGKT 207


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FYGPPGCGKT 10
YG PG GKT
Sbjct: 198 LYGLPGTGKT 207


>sp|NTPTH_AERPE|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Aeropyrum pernix (strain ATCC 700893

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 24 GPPGSGKS 31


>sp|CFBD_METBF|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina barkeri

Query: 2 YGPPGC 7
+GPPGC
Sbjct: 34 HGPPGC 39


>sp|LONH_METTH|PUTATIVE lon protease homolog|Methanothermobacter thermautotrophicus

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 53 GPPGIGKS 60


>sp|RFCS_METTH|REPLICATION factor C small subunit|Methanothermobacter thermautotrophicus

Query: 1 FYGPPGCGKT 10
F GP G GKT
Sbjct: 44 FTGPAGVGKT 53


>sp|RFCS_METS3|REPLICATION factor C small subunit|Methanobrevibacter smithii (strain ATCC

Query: 1 FYGPPGCGKT 10
F GP G GKT
Sbjct: 41 FTGPAGVGKT 50


>sp|LONH_THEVO|PUTATIVE lon protease homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 52 GPPGVGKS 59


>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 52 GPPGVGKS 59


>sp|RFCS_METVS|REPLICATION factor C small subunit|Methanococcus vannielii (strain ATCC 35089

Query: 1 FYGPPGCGKT 10
F G PG GKT
Sbjct: 41 FSGSPGVGKT 50


>sp|RFCS_METMP|REPLICATION factor C small subunit|Methanococcus maripaludis (strain DSM

Query: 1 FYGPPGCGKT 10
F G PG GKT
Sbjct: 41 FSGSPGVGKT 50


>sp|RFCS_METM7|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C7 /

Query: 1 FYGPPGCGKT 10
F G PG GKT
Sbjct: 41 FSGSPGVGKT 50


>sp|RFCS_METM6|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C6 /

Query: 1 FYGPPGCGKT 10
F G PG GKT
Sbjct: 41 FSGSPGVGKT 50


>sp|RFCS_METM5|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C5 /

Query: 1 FYGPPGCGKT 10
F G PG GKT
Sbjct: 41 FSGSPGVGKT 50


>sp|KAD_METBU|ADENYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 FYGPPGCGK 9
+GPPG GK
Sbjct: 5 LFGPPGAGK 13


>sp|RFCS_HALMA|REPLICATION factor C small subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 FYGPPGCGKT 10
F GP G GKT
Sbjct: 52 FSGPAGTGKT 61


>sp|RFCS_NATPD|REPLICATION factor C small subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 FYGPPGCGKT 10
F GP G GKT
Sbjct: 50 FAGPAGVGKT 59


>sp|RFCS_PICTO|REPLICATION factor C small subunit|Picrophilus torridus (strain ATCC 700027

Query: 1 FYGPPGCGKT 10
F GP G GKT
Sbjct: 41 FAGPAGTGKT 50


>sp|RFCS_HALSA|REPLICATION factor C small subunit|Halobacterium salinarum (strain ATCC

Query: 1 FYGPPGCGKT 10
F GP G GKT
Sbjct: 48 FAGPAGTGKT 57


>sp|RFCS_HALS3|REPLICATION factor C small subunit|Halobacterium salinarum (strain ATCC 29341

Query: 1 FYGPPGCGKT 10
F GP G GKT
Sbjct: 48 FAGPAGTGKT 57


>sp|ISCS_METTE|CYSTEINE desulfurase IscS|Methanosarcina thermophila

Query: 1 FYGPPGCG 8
F GP GCG
Sbjct: 217 FEGPKGCG 224


>sp|CDC6Q_HALMA|ORC1-TYPE DNA replication protein 17|Haloarcula marismortui (strain ATCC

Query: 2 YGPPGCGKT 10
YG GCGK+
Sbjct: 71 YGKTGCGKS 79


>sp|Y053_METJA|UNCHARACTERIZED protein MJ0053|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FYGPPGCGKT 10
+G GCGKT
Sbjct: 15 LFGKTGCGKT 24


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 FYGPPGCGKT 10
YG PG GKT
Sbjct: 48 LYGGPGVGKT 57


>sp|KAD_HALMA|ADENYLATE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 3 GPPGCGK 9
GPPG GK
Sbjct: 10 GPPGAGK 16


>sp|RFCL_METLZ|REPLICATION factor C large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 FYGPPGCGKT 10
F G PG GKT
Sbjct: 41 FTGKPGIGKT 50


>sp|CDC6N_HALMA|ORC1-TYPE DNA replication protein 14|Haloarcula marismortui (strain ATCC

Query: 1 FYGPPGCGKT 10
YGP G GK+
Sbjct: 56 LYGPAGTGKS 65


>sp|CDC65_HALSA|ORC1-TYPE DNA replication protein 5|Halobacterium salinarum (strain ATCC

Query: 1 FYGPPGCGKT 10
YGP G GK+
Sbjct: 56 LYGPAGTGKS 65


>sp|Y292_METBF|UPF0179 protein Mbar_A0292|Methanosarcina barkeri (strain Fusaro /

Query: 2 YGPPGCGK 9
Y PP CGK
Sbjct: 96 YEPPKCGK 103


>sp|TFE_METHJ|TRANSCRIPTION factor E|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 FYGPPGCGKT 10
FY P CG T
Sbjct: 118 FYNCPNCGNT 127


>sp|KCY_METPE|CYTIDYLATE kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 GPPGCGKT 10
GPPG G T
Sbjct: 7 GPPGSGTT 14


>sp|KCY_METMJ|CYTIDYLATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 GPPGCGKT 10
GPPG G T
Sbjct: 7 GPPGSGTT 14


>sp|KCY_ARCFU|CYTIDYLATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GPPGCGKT 10
GPPG G T
Sbjct: 7 GPPGSGTT 14


>sp|NTPTH_IGNH4|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 GPPGCGKT 10
GPPG GK+
Sbjct: 8 GPPGAGKS 15


>sp|KTHY_METMP|PROBABLE thymidylate kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FYGPPGCGKT 10
F G GCGKT
Sbjct: 7 FEGIDGCGKT 16


>sp|KTHY_METM7|PROBABLE thymidylate kinase|Methanococcus maripaludis (strain C7 /

Query: 1 FYGPPGCGKT 10
F G GCGKT
Sbjct: 7 FEGIDGCGKT 16


>sp|KTHY_METM6|PROBABLE thymidylate kinase|Methanococcus maripaludis (strain C6 /

Query: 1 FYGPPGCGKT 10
F G GCGKT
Sbjct: 7 FEGIDGCGKT 16


>sp|KTHY_METM5|PROBABLE thymidylate kinase|Methanococcus maripaludis (strain C5 /

Query: 1 FYGPPGCGKT 10
F G GCGKT
Sbjct: 7 FEGIDGCGKT 16


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GPPGCGKT 10
PPG GKT
Sbjct: 106 APPGLGKT 113


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GPPGCGKT 10
PPG GKT
Sbjct: 109 APPGLGKT 116


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GPPGCGKT 10
PPG GKT
Sbjct: 110 APPGLGKT 117


>sp|CDC62_ARCFU|ORC1-TYPE DNA replication protein 2|Archaeoglobus fulgidus (strain ATCC

Query: 3 GPPGCGKT 10
GPP GKT
Sbjct: 69 GPPSTGKT 76


>sp|LEUC2_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 4 PPGCG 8
PPGCG
Sbjct: 317 PPGCG 321


>sp|RFCL_NATPD|REPLICATION factor C large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 FYGPPGCGKT 10
+G PG GKT
Sbjct: 42 LHGSPGVGKT 51




105|Sequence|521|530|GCGKTLLAKA

>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 1 GCGKTLLAKA 10
GCGKTL+AKA
Sbjct: 183 GCGKTLMAKA 192


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GCGKTLLAKA 10
GCGKTL+AKA
Sbjct: 182 GCGKTLMAKA 191


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GCGKTLLAKA 10
GCGKTL+AKA
Sbjct: 182 GCGKTLMAKA 191


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GCGKTLLAKA 10
GCGKTL+AKA
Sbjct: 184 GCGKTLMAKA 193


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GCGKTLLAKA 10
GCGKTL+AKA
Sbjct: 181 GCGKTLMAKA 190


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 GCGKTLLAKA 10
GCGKTL+AKA
Sbjct: 181 GCGKTLMAKA 190


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GCGKTLLAKA 10
G GKTLLAKA
Sbjct: 511 GVGKTLLAKA 520


Query: 1 GCGKTLLAKA 10
G GKTL+A+A
Sbjct: 234 GTGKTLIARA 243


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GCGKTLLAKA 10
GCGKT++A A
Sbjct: 147 GCGKTMIAAA 156


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GCGKTLLAKA 10
G GKTLLAKA
Sbjct: 499 GTGKTLLAKA 508


Query: 1 GCGKTLLAKA 10
G GKTL+AKA
Sbjct: 226 GTGKTLIAKA 235


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 GCGKTLLAKA 10
G GKTLLAKA
Sbjct: 223 GTGKTLLAKA 232


Query: 1 GCGKTLLAKA 10
G GKTLLAKA
Sbjct: 496 GTGKTLLAKA 505


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GCGKTLLAKA 10
G GKTLLAKA
Sbjct: 178 GTGKTLLAKA 187


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GCGKTLLAKA 10
G GKTLLAKA
Sbjct: 192 GTGKTLLAKA 201


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GCGKTLLAKA 10
G GKTLLAKA
Sbjct: 195 GTGKTLLAKA 204


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GCGKTLLAKA 10
G GKTLLAKA
Sbjct: 192 GTGKTLLAKA 201


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GCGKTLLAKA 10
G GKTLLAKA
Sbjct: 203 GTGKTLLAKA 212


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 GCGKTLLAKA 10
G GKTLLAKA
Sbjct: 192 GTGKTLLAKA 201


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 GCGKTLLAKA 10
G GKTLLAKA
Sbjct: 192 GTGKTLLAKA 201


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 1 GCGKTLLAKA 10
G GKTLLAKA
Sbjct: 192 GTGKTLLAKA 201


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 GCGKTLLAKA 10
G GKTLLAKA
Sbjct: 223 GTGKTLLAKA 232


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GCGKTLLAKA 10
G GKTLLAKA
Sbjct: 214 GTGKTLLAKA 223


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GCGKTLLAKA 10
G GKTLLAKA
Sbjct: 197 GTGKTLLAKA 206


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 1 GCGKTLLAKA 10
G GKTLLAKA
Sbjct: 222 GTGKTLLAKA 231


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GCGKTLLAKA 10
G GKTLLAKA
Sbjct: 203 GTGKTLLAKA 212


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GCGKTLLAKA 10
G GKTLLAKA
Sbjct: 203 GTGKTLLAKA 212


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GCGKTLLAKA 10
G GKTLLAKA
Sbjct: 185 GTGKTLLAKA 194


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GCGKTLLAKA 10
G GKTLLAKA
Sbjct: 183 GTGKTLLAKA 192


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 GCGKTLLAKA 10
G GKTLLAKA
Sbjct: 233 GTGKTLLAKA 242


Query: 1 GCGKTLLAKA 10
G GKTL+AKA
Sbjct: 506 GTGKTLMAKA 515


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GCGKTLLAKA 10
G GKT+LAKA
Sbjct: 531 GTGKTMLAKA 540


Query: 1 GCGKTLLAKA 10
G GKTLLA+A
Sbjct: 256 GTGKTLLARA 265


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GCGKTLLAKA 10
G GKT+LAKA
Sbjct: 178 GTGKTMLAKA 187


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GCGKTLLAKA 10
G GKT+LAKA
Sbjct: 178 GTGKTMLAKA 187


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GCGKTLLAKA 10
G GKT+LAKA
Sbjct: 178 GTGKTMLAKA 187


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GCGKTLLAKA 10
G GKT+LAKA
Sbjct: 178 GTGKTMLAKA 187


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 GCGKTLLAKA 10
G GKT+LAKA
Sbjct: 178 GTGKTMLAKA 187


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GCGKTLLAKA 10
G GKT+LAKA
Sbjct: 178 GTGKTMLAKA 187


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GCGKTLLAKA 10
G GKT+LAKA
Sbjct: 178 GTGKTMLAKA 187


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 1 GCGKTLLAKA 10
G GKT+LAKA
Sbjct: 196 GTGKTMLAKA 205


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 GCGKTLLAKA 10
G GKT+LAKA
Sbjct: 196 GTGKTMLAKA 205


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 1 GCGKTLLAKA 10
G GKT+LAKA
Sbjct: 194 GTGKTMLAKA 203


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 GCGKTLLAKA 10
G GKTL+AKA
Sbjct: 192 GTGKTLMAKA 201


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GCGKTLLAKA 10
G GKTLLA+A
Sbjct: 197 GTGKTLLARA 206


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GCGKTLLAKA 10
G GKTLLA+A
Sbjct: 197 GTGKTLLARA 206


>sp|LONB_HALSA|ARCHAEAL Lon protease|Halobacterium salinarum (strain ATCC 700922

Query: 1 GCGKTLLAKA 10
G GK+LLAKA
Sbjct: 120 GTGKSLLAKA 129


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GCGKTLLAKA 10
G GKTL+A+A
Sbjct: 164 GTGKTLMARA 173


>sp|PAN2_METTM|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter marburgensis (strain ATCC

Query: 1 GCGKTLLAKA 10
G GKT+LAK+
Sbjct: 167 GTGKTMLAKS 176


>sp|PAN2_METTH|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GCGKTLLAKA 10
G GKT+LAK+
Sbjct: 167 GTGKTMLAKS 176


>sp|LONB_METTH|ARCHAEAL Lon protease|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GCGKTLLAKA 10
G GK++LAKA
Sbjct: 74 GVGKSMLAKA 83


>sp|LONB_ARCFU|ARCHAEAL Lon protease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GCGKTLLAKA 10
G GK++LAKA
Sbjct: 57 GTGKSMLAKA 66


>sp|RFCL_SACS2|REPLICATION factor C large subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 GCGKTLLAKA 10
G GKT+LA+A
Sbjct: 50 GVGKTVLAEA 59


>sp|LONH_METTH|PUTATIVE lon protease homolog|Methanothermobacter thermautotrophicus

Query: 1 GCGKTLLAKA 10
G GK+LLA+A
Sbjct: 56 GIGKSLLAQA 65


>sp|RL5_METMP|LARGE ribosomal subunit protein uL5|Methanococcus maripaludis (strain DSM

Query: 1 GCGKTLLAKA 10
CGKTL A +
Sbjct: 92 ACGKTLFASS 101


>sp|KTHY_THEVO|PROBABLE thymidylate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GCGKTLLAKA 10
G GKT LAK+
Sbjct: 10 GAGKTTLAKS 19


>sp|KTHY1_SULTO|PROBABLE thymidylate kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GCGKTLLAK 9
G GKT LAK
Sbjct: 12 GAGKTTLAK 20


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 GCGKTLLAK 9
G GKT LAK
Sbjct: 328 GAGKTTLAK 336


>sp|NTPTH_PYRFU|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GCGKTLLAK 9
G GKT LAK
Sbjct: 13 GVGKTTLAK 21


>sp|NTPTH_PYRAB|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrococcus abyssi (strain GE5 /

Query: 1 GCGKTLLAK 9
G GKT LAK
Sbjct: 10 GVGKTTLAK 18


>sp|AMPD_AERPE|ANHYDROMEVALONATE phosphate decarboxylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GCGKTLLAK 9
GCG LLA+
Sbjct: 37 GCGPPLLAR 45


>sp|CDC6M_HALMA|ORC1-TYPE DNA replication protein 13|Haloarcula marismortui (strain ATCC

Query: 1 GCGKTLLAK 9
G GKTL+A+
Sbjct: 79 GTGKTLVAR 87


>sp|CDC62_AERPE|ORC1-TYPE DNA replication protein 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 GCGKTLLAK 9
G GKT LAK
Sbjct: 60 GIGKTTLAK 68


>sp|NTPTH_PYRHO|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GCGKTLLAK 9
G GKT LAK
Sbjct: 10 GVGKTTLAK 18


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 1 GCGKTLLAK 9
G GKTL+A+
Sbjct: 56 GSGKTLIAE 64


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GCGKTLLAK 9
G GKTL+A+
Sbjct: 49 GSGKTLIAE 57


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 1 GCGKTLLAK 9
G GKTL+A+
Sbjct: 56 GSGKTLIAE 64


>sp|BPS2_ACIAM|PROTEIN bps2|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 3 GKTLLAKA 10
GKT LAKA
Sbjct: 33 GKTSLAKA 40


>sp|CBIA_SACS2|COBYRINATE a,c-diamide synthase|Saccharolobus solfataricus (strain ATCC

Query: 1 GCGKTLLAKA 10
G GKTL+ A
Sbjct: 12 GSGKTLITSA 21


>sp|KCY_HALMA|CYTIDYLATE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GCGKTLLAKA 10
G GK+ LAK+
Sbjct: 10 GSGKSTLAKS 19


>sp|CDC6_CENSY|ORC1-TYPE DNA replication protein|Cenarchaeum symbiosum (strain A)

Query: 1 GCGKTLLAK 9
G GKTL+ K
Sbjct: 77 GTGKTLVVK 85


>sp|KAD6_PYRAB|PUTATIVE adenylate kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 GCGKTLLAK 9
G GKT +AK
Sbjct: 10 GVGKTTIAK 18


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 CGKTLLAK 9
CGKT+ K
Sbjct: 660 CGKTITKK 667




106|Sequence|526|535|LLAKAIANEC

>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLAKAIANE 9
LLAKA+ANE
Sbjct: 504 LLAKAVANE 512


Query: 1 LLAKAIANE 9
L+AKA+ANE
Sbjct: 231 LIAKAVANE 239


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 LLAKAIANE 9
LLAKA+ANE
Sbjct: 238 LLAKAVANE 246


Query: 1 LLAKAIANE 9
L+AKA+ANE
Sbjct: 511 LMAKAVANE 519


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 LLAKAIANE 9
LLAKA+ANE
Sbjct: 228 LLAKAVANE 236


Query: 1 LLAKAIANE 9
LLAKA+ANE
Sbjct: 501 LLAKAVANE 509


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 1 LLAKAIANE 9
+LAKA+ANE
Sbjct: 201 MLAKAVANE 209


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLAKAIANE 9
LLAKA+AN+
Sbjct: 190 LLAKAVANQ 198


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LLAKAIANE 9
LLA+A+ANE
Sbjct: 261 LLARALANE 269


Query: 1 LLAKAIANE 9
+LAKA+A E
Sbjct: 536 MLAKAVATE 544


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 LLAKAIANE 9
+LAKA+AN+
Sbjct: 201 MLAKAVANQ 209


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 1 LLAKAIANE 9
+LAKA+AN+
Sbjct: 199 MLAKAVANQ 207


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 LLAKAIAN 8
LLAKA+AN
Sbjct: 228 LLAKAVAN 235


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LLAKAIAN 8
LLAKA+AN
Sbjct: 208 LLAKAVAN 215


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LLAKAIANE 9
LLAKA+A+E
Sbjct: 200 LLAKAVAHE 208


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LLAKAIANE 9
LLAKA+A+E
Sbjct: 202 LLAKAVAHE 210


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 1 LLAKAIANE 9
LLAKA+A+E
Sbjct: 227 LLAKAVAHE 235


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LLAKAIANE 9
L+AKAIA+E
Sbjct: 186 LMAKAIAHE 194


>sp|PAN2_METTM|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter marburgensis (strain ATCC

Query: 1 LLAKAIANE 9
+LAK++ANE
Sbjct: 172 MLAKSLANE 180


>sp|PAN2_METTH|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LLAKAIANE 9
+LAK++ANE
Sbjct: 172 MLAKSLANE 180


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LLAKAIANE 9
LLAKA+A E
Sbjct: 516 LLAKAVATE 524


>sp|RS2_METBU|SMALL ribosomal subunit protein uS2|Methanococcoides burtonii (strain DSM

Query: 1 LLAKAIANE 9
LLA+ IANE
Sbjct: 190 LLAREIANE 198


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LLAKAIANE 9
LLAKA+A E
Sbjct: 183 LLAKAVATE 191


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LLAKAIANE 9
LLAKA+A E
Sbjct: 188 LLAKAVAGE 196


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LLAKAIANE 9
LLAKA+A E
Sbjct: 197 LLAKAVARE 205


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLAKAIANE 9
LLAKA+A E
Sbjct: 219 LLAKAVATE 227


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LLAKAIAN 8
L+AKA+AN
Sbjct: 187 LMAKAVAN 194


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LLAKAIAN 8
L+AKA+AN
Sbjct: 187 LMAKAVAN 194


>sp|DPCKG_SACS2|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LLAKAIANEC 10
+L KAI EC
Sbjct: 170 ILEKAIVKEC 179


>sp|GCS2_HALLT|GLUTAMATE--CYSTEINE ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 LAKAIANEC 10
L +A+A+EC
Sbjct: 310 LGEAVADEC 318


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LLAKAIANE 9
+LAKA+A E
Sbjct: 183 MLAKAVATE 191


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LLAKAIANE 9
+LAKA+A E
Sbjct: 183 MLAKAVATE 191


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LLAKAIANE 9
+LAKA+A E
Sbjct: 183 MLAKAVATE 191


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LLAKAIANE 9
+LAKA+A E
Sbjct: 183 MLAKAVATE 191


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 LLAKAIANE 9
+LAKA+A E
Sbjct: 183 MLAKAVATE 191


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LLAKAIANE 9
+LAKA+A E
Sbjct: 183 MLAKAVATE 191


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LLAKAIANE 9
+LAKA+A E
Sbjct: 183 MLAKAVATE 191


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 1 LLAKAIANE 9
LLAKA+A E
Sbjct: 197 LLAKAVAYE 205


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 LLAKAIANE 9
LLAKA+A E
Sbjct: 197 LLAKAVAYE 205


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LLAKAIANE 9
LLAKA+A E
Sbjct: 197 LLAKAVAYE 205


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 LLAKAIANE 9
LLAKA+A E
Sbjct: 197 LLAKAVAYE 205


>sp|DPCKG_SACI7|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LLAKAIANEC 10
+L KA+ EC
Sbjct: 169 ILEKAVVKEC 178


>sp|DPCKG_SACI2|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LLAKAIANEC 10
+L KA+ EC
Sbjct: 169 ILEKAVVKEC 178


>sp|DPCKG_SACI1|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LLAKAIANEC 10
+L KA+ EC
Sbjct: 169 ILEKAVVKEC 178


>sp|DPCKG_SACI6|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LLAKAIANEC 10
+L KA+ EC
Sbjct: 170 ILEKAVVEEC 179


>sp|DPCKG_SACI4|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LLAKAIANEC 10
+L KA+ EC
Sbjct: 170 ILEKAVVEEC 179


>sp|DPCKG_SACI3|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain M.16.27)

Query: 1 LLAKAIANEC 10
+L KA+ EC
Sbjct: 170 ILEKAVVEEC 179




107|Sequence|531|540|IANECQANFI

>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 IANECQANFI 10
+ANE ANFI
Sbjct: 516 VANETNANFI 525


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IANECQANFI 10
+ANE ANFI
Sbjct: 509 VANESNANFI 518


Query: 1 IANECQANFI 10
+ANE A+FI
Sbjct: 236 VANEVDAHFI 245


>sp|MTBB3_METMA|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IANECQA 7
+ANECQA
Sbjct: 127 VANECQA 133


>sp|MTBB2_METMA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IANECQA 7
+ANECQA
Sbjct: 127 VANECQA 133


>sp|MTBB1_METMA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IANECQA 7
+ANECQA
Sbjct: 127 VANECQA 133


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 IANECQANFI 10
+ANE ANFI
Sbjct: 506 VANESGANFI 515


Query: 1 IANECQANF 9
+ANE ANF
Sbjct: 233 VANEAGANF 241


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IANECQANFI 10
IANE + NF+
Sbjct: 994 IANEVRGNFV 1003


>sp|MTBB3_METBA|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina barkeri

Query: 1 IANECQA 7
++NECQA
Sbjct: 79 VSNECQA 85


>sp|MTBB3_METAC|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina acetivorans (strain ATCC

Query: 1 IANECQA 7
++NECQA
Sbjct: 127 VSNECQA 133


>sp|MTBB2_METBF|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri (strain Fusaro /

Query: 1 IANECQA 7
++NECQA
Sbjct: 127 VSNECQA 133


>sp|MTBB2_METBA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri

Query: 1 IANECQA 7
++NECQA
Sbjct: 79 VSNECQA 85


>sp|MTBB2_METAC|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina acetivorans (strain ATCC

Query: 1 IANECQA 7
++NECQA
Sbjct: 127 VSNECQA 133


>sp|MTBB1_METBF|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri (strain Fusaro /

Query: 1 IANECQA 7
++NECQA
Sbjct: 127 VSNECQA 133


>sp|MTBB1_METBA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri

Query: 1 IANECQA 7
++NECQA
Sbjct: 127 VSNECQA 133


>sp|MTBB1_METAC|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina acetivorans (strain ATCC

Query: 1 IANECQA 7
++NECQA
Sbjct: 127 VSNECQA 133


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IANECQANFI 10
+ANE ANF+
Sbjct: 244 VANESGANFL 253


>sp|QUEC_HALSA|7-CYANO-7-DEAZAGUANINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ANECQANFI 10
AN+C+A FI
Sbjct: 116 ANDCEAVFI 124


>sp|QUEC_HALS3|7-CYANO-7-DEAZAGUANINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 ANECQANFI 10
AN+C+A FI
Sbjct: 116 ANDCEAVFI 124


>sp|PSTK_METMP|L-SERYL-TRNA(SEC) kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IANECQANFI 10
IA EC N++
Sbjct: 90 IAKECDTNYV 99


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 1 IANECQANFI 10
+ANE A+FI
Sbjct: 206 VANETNASFI 215


>sp|CPGS_METKA|CYCLIC 2,3-diphosphoglycerate synthetase|Methanopyrus kandleri (strain

Query: 1 IANECQANFI 10
IANE A+F+
Sbjct: 243 IANELPADFV 252


>sp|GCST_HALSA|PROBABLE aminomethyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 1 IANECQ 6
IAN+CQ
Sbjct: 217 IANDCQ 222


>sp|GCST_HALS3|PROBABLE aminomethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 IANECQ 6
IAN+CQ
Sbjct: 217 IANDCQ 222


>sp|QUEC_HALMA|7-CYANO-7-DEAZAGUANINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 ANECQANFI 10
AN+C A FI
Sbjct: 118 ANDCGAVFI 126




108|Sequence|536|545|QANFISIKGP

>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 ANFISIKGP 10
ANFISIKGP
Sbjct: 527 ANFISIKGP 535


Query: 2 ANFISIKGP 10
ANF+SI GP
Sbjct: 250 ANFLSINGP 258


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ANFISIKGP 10
ANFIS+KGP
Sbjct: 515 ANFISVKGP 523


Query: 2 ANFISIKGP 10
A+FI I GP
Sbjct: 242 AHFIPISGP 250


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 2 ANFISIKGP 10
ANFIS+KGP
Sbjct: 512 ANFISVKGP 520


Query: 2 ANFISIKGP 10
ANF I GP
Sbjct: 239 ANFYVINGP 247


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 2 ANFISIKGP 10
ANFIS++GP
Sbjct: 522 ANFISVRGP 530


Query: 2 ANFISIKGP 10
A+F SI GP
Sbjct: 249 ASFFSIAGP 257


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 ANFISIKGP 10
ANFI+++GP
Sbjct: 547 ANFIAVRGP 555


>sp|Y796_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 QANFISIKGP 10
+ F+SI GP
Sbjct: 30 EGEFVSIMGP 39


>sp|RL6_PYRAB|LARGE ribosomal subunit protein uL6|Pyrococcus abyssi (strain GE5 /

Query: 1 QANFISIKGP 10
Q N + +KGP
Sbjct: 22 QGNTVKVKGP 31


>sp|Y2322_SULTO|UPF0282 protein STK_23220|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 NFISIKGP 10
NFI I GP
Sbjct: 195 NFIIIDGP 202




109|Sequence|541|550|SIKGPELLTM

>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SIKGPELLT 9
SIKGPE+L+
Sbjct: 531 SIKGPEVLS 539


>sp|HIS6_METS3|IMIDAZOLE glycerol phosphate synthase subunit|Methanobrevibacter smithii

Query: 1 SIKGPELLT 9
+IK PELLT
Sbjct: 110 AIKNPELLT 118


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SIKGPELLT 9
S+KGPELL+
Sbjct: 519 SVKGPELLS 527


>sp|GATE_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina acetivorans (strain ATCC

Query: 1 SIKGPELLT 9
SIK PELLT
Sbjct: 445 SIKPPELLT 453


>sp|HIS6_NITMS|IMIDAZOLE glycerol phosphate synthase subunit|Nitrosopumilus maritimus

Query: 1 SIKGPELLT 9
++K PELLT
Sbjct: 106 AVKNPELLT 114


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 SIKGPELLT 9
S+KGPE+ +
Sbjct: 516 SVKGPEIFS 524


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 SIKGPELLT 9
S++GP+LL+
Sbjct: 526 SVRGPQLLS 534


>sp|KCY_METKA|CYTIDYLATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 2 IKGPELLTM 10
+KGP+L T+
Sbjct: 99 VKGPDLATL 107


>sp|KPYK_THEAC|PYRUVATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IKGPELLT 9
+KGPEL T
Sbjct: 62 LKGPELRT 69


>sp|IF2P_METST|PROBABLE translation initiation factor IF-2|Methanosphaera stadtmanae

Query: 5 PELLTM 10
PELLTM
Sbjct: 206 PELLTM 211


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SIKGPELLT 9
+++GPE+L+
Sbjct: 551 AVRGPEILS 559


>sp|CAS6_PYRFU|CRISPR-ASSOCIATED endoribonuclease Cas6|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IKGPELLT 9
+KGP+L T
Sbjct: 48 VKGPKLFT 55


>sp|IF2P_METTH|PROBABLE translation initiation factor IF-2|Methanothermobacter

Query: 5 PELLTM 10
PELLTM
Sbjct: 206 PELLTM 211




110|Sequence|546|555|ELLTMWFGES

>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ELLTMWFGES 10
ELL+ W GES
Sbjct: 524 ELLSKWVGES 533


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ELLTMWFGES 10
E+L+ W GES
Sbjct: 556 EILSKWVGES 565


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ELLTMWFGES 10
E+L+ W GES
Sbjct: 536 EVLSKWVGES 545


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 ELLTMWFGES 10
+LL+ W GES
Sbjct: 531 QLLSKWVGES 540


>sp|PSTB_METMA|PHOSPHATE import ATP-binding protein PstB|Methanosarcina mazei (strain ATCC

Query: 1 ELLTMWFGE 9
E L +W+GE
Sbjct: 16 ENLNLWYGE 24


>sp|PSTB_METBF|PHOSPHATE import ATP-binding protein PstB|Methanosarcina barkeri (strain

Query: 1 ELLTMWFGE 9
E L +W+GE
Sbjct: 16 ENLNLWYGE 24


>sp|PSTB_METAC|PHOSPHATE import ATP-binding protein PstB|Methanosarcina acetivorans

Query: 1 ELLTMWFGE 9
E L +W+GE
Sbjct: 16 ENLNLWYGE 24


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 ELLTMWFGES 10
E+ + W GES
Sbjct: 521 EIFSKWVGES 530


>sp|THI4_HALMA|THIAMINE thiazole synthase|Haloarcula marismortui (strain ATCC 43049

Query: 4 TMWFGES 10
+MW GES
Sbjct: 232 SMWVGES 238


>sp|PSTB_METHJ|PHOSPHATE import ATP-binding protein PstB|Methanospirillum hungatei JF-1

Query: 3 LTMWFGES 10
L +W+GE+
Sbjct: 12 LNLWYGEN 19


>sp|PSTB_METBU|PHOSPHATE import ATP-binding protein PstB|Methanococcoides burtonii (strain

Query: 3 LTMWFGE 9
L +W+GE
Sbjct: 15 LNLWYGE 21


>sp|PSTB_METJA|PHOSPHATE import ATP-binding protein PstB|Methanocaldococcus jannaschii

Query: 3 LTMWFGE 9
L +W+GE
Sbjct: 11 LNLWYGE 17


>sp|RFCL_SULAC|REPLICATION factor C large subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ELLTMWFGES 10
ELL WF E+
Sbjct: 261 ELLMRWFDEN 270


>sp|ILVC_NITMS|KETOL-ACID reductoisomerase (NADP(+))|Nitrosopumilus maritimus (strain SCM1)

Query: 1 ELLTMWFGE 9
E+ T WFGE
Sbjct: 187 EVETDWFGE 195


>sp|GGR_PYRFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ELLTMWFG 8
+L+ +WFG
Sbjct: 189 DLIHLWFG 196


>sp|GGR_THEGJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 ELLTMWFG 8
+L+ +WFG
Sbjct: 191 DLIHLWFG 198


>sp|ILVC_CENSY|KETOL-ACID reductoisomerase (NADP(+))|Cenarchaeum symbiosum (strain A)

Query: 1 ELLTMWFGE 9
E+ T WFGE
Sbjct: 187 EVETDWFGE 195


>sp|GGR_THEKO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ELLTMWFG 8
+L+ +WFG
Sbjct: 191 DLIHLWFG 198


>sp|HMGCS_THESM|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus sibiricus (strain DSM 12597

Query: 1 ELLTMWFG 8
E+ +WFG
Sbjct: 74 EIRALWFG 81


>sp|PYRH_IGNH4|URIDYLATE kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 ELLTMWFGE 9
E+L +W GE
Sbjct: 93 EVLELWDGE 101


>sp|NPD_PYRFU|NAD-DEPENDENT protein deacylase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 MWFGES 10
+WFGE+
Sbjct: 162 VWFGEA 167


>sp|CCA_SULAC|CCA-ADDING enzyme|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ELLTMWFG 8
ELLT+++G
Sbjct: 174 ELLTIYYG 181


>sp|FLAK_METMP|PREFLAGELLIN peptidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ELLTMWFGE 9
E++ M+FGE
Sbjct: 148 EVILMFFGE 156




111|Sequence|551|560|WFGESEANVR

>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WFGESEANVR 10
W GESE +VR
Sbjct: 529 WVGESEKHVR 538


Query: 1 WFGESEANVR 10
++GESE +R
Sbjct: 256 YYGESEQRLR 265


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 WFGESEANVR 10
W GESE +R
Sbjct: 541 WVGESEKAIR 550


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 WFGESEANVR 10
W GESE +R
Sbjct: 561 WVGESEKAIR 570


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 WFGESEANV 9
W GE+E NV
Sbjct: 177 WLGEAEKNV 185


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 WFGESEANVR 10
W GESE +R
Sbjct: 526 WVGESEKAIR 535


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 WFGESEANVR 10
W GESE +R
Sbjct: 536 WVGESEKAIR 545


Query: 1 WFGESEANVR 10
++GESE +R
Sbjct: 263 YYGESEQQLR 272


>sp|FTRL_METKA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanopyrus kandleri (strain AV19

Query: 2 FGESEANV 9
FGESEA V
Sbjct: 49 FGESEAGV 56


>sp|BACS3_HALMA|SENSORY rhodopsin III|Haloarcula marismortui (strain ATCC 43049

Query: 1 WFGESEANVR 10
WF + N+R
Sbjct: 24 WFAATRGNIR 33


>sp|ARGB_METMA|ACETYLGLUTAMATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WFGESE 6
W GESE
Sbjct: 151 WVGESE 156


>sp|ARGB_METAC|ACETYLGLUTAMATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 WFGESE 6
W GESE
Sbjct: 151 WVGESE 156


>sp|THI4_HALMA|THIAMINE thiazole synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 WFGESEANV 9
W GESE V
Sbjct: 234 WVGESEDAV 242


>sp|IPYR_SULTO|INORGANIC pyrophosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WFGESEANVR 10
W G SEA R
Sbjct: 152 WGGVSEAKTR 161


>sp|AROC_HALMD|CHORISMATE synthase|Halomicrobium mukohataei (strain ATCC 700874

Query: 2 FGESEA 7
FGESEA
Sbjct: 270 FGESEA 275




112|Sequence|556|565|EANVREIFDK

>sp|GSA_THEVO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EANVREIFDK 10
E N++EIF K
Sbjct: 180 ENNIKEIFQK 189


>sp|LEUC_METS5|3-ISOPROPYLMALATE dehydratase large subunit|Metallosphaera sedula (strain ATCC

Query: 1 EANVREIFDK 10
+AN+ +IFDK
Sbjct: 47 KANMMKIFDK 56


>sp|BIOW_METVS|6-CARBOXYHEXANOATE--COA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 ANVREIFDK 10
AN+ EIF+K
Sbjct: 228 ANIEEIFEK 236


>sp|RPO1C_METMP|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain DSM

Query: 2 ANVREIFD 9
+N++E+FD
Sbjct: 242 SNIKEVFD 249


>sp|AGLB3_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 REIFDK 10
RE+FDK
Sbjct: 129 REVFDK 134


>sp|IF2A_STAMF|TRANSLATION initiation factor 2 subunit|Staphylothermus marinus (strain ATCC

Query: 2 ANVREIFD 9
A V+EIFD
Sbjct: 17 ATVKEIFD 24


>sp|LPLAN_THEAC|LIPOATE-PROTEIN ligase A subunit 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EANVREIFDK 10
E+ RE+FDK
Sbjct: 236 ESLARELFDK 245


>sp|ENO_PICTO|ENOLASE torridus (strain ATCC 700027

Query: 1 EANVREIFD 9
+ N+R+IFD
Sbjct: 7 DTNIRKIFD 15


>sp|AROD_SULAC|3-DEHYDROQUINATE dehydratase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 VREIFDK 10
V+EIFDK
Sbjct: 125 VKEIFDK 131


>sp|Y3523_METJA|UNCHARACTERIZED protein MJECL23|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ANVREIFDK 10
+N +EI+DK
Sbjct: 28 SNYKEIYDK 36


>sp|SERK_DESM0|ATP-DEPENDENT L-serine kinase|Desulfurococcus mucosus (strain ATCC 35584

Query: 1 EANVREIFDK 10
+A +RE+ DK
Sbjct: 40 DARLRELMDK 49


>sp|LEUC_SACS2|3-ISOPROPYLMALATE dehydratase large subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 EANVREIFDK 10
+AN+ ++FDK
Sbjct: 49 KANMIKVFDK 58


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EANVREIFDK 10
E +REIF K
Sbjct: 269 EQKLREIFSK 278


>sp|HEM1_SULAC|GLUTAMYL-TRNA reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 NVREIFDK 10
N++EI DK
Sbjct: 356 NIKEIIDK 363


>sp|RPO1C_METM5|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain C5 /

Query: 2 ANVREIFD 9
+N++E+FD
Sbjct: 242 SNIKEVFD 249


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 3 NVREIFD 9
N+R++FD
Sbjct: 438 NIRKVFD 444




113|Sequence|561|570|EIFDKARQAA

>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EIFDKARQAA 10
EIF KARQAA
Sbjct: 571 EIFRKARQAA 580


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 EIFDKARQAA 10
EIF KARQ+A
Sbjct: 536 EIFRKARQSA 545


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EIFDKARQAA 10
EIF KA+Q A
Sbjct: 551 EIFKKAKQVA 560


>sp|DADD_METS3|5'-DEOXYADENOSINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 EIFDKARQA 9
EI+ KAR+A
Sbjct: 418 EIYKKARKA 426


>sp|GSA_METBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EIFDKARQ 8
++FDKAR+
Sbjct: 9 DLFDKARK 16


>sp|FBPAP_METJA|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 FDKARQAA 10
FDKAR+ A
Sbjct: 320 FDKAREKA 327


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EIFDKARQAA 10
E+F KARQ A
Sbjct: 539 EMFRKARQVA 548


>sp|LEUC_PYRNV|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum neutrophilum (strain DSM

Query: 1 EIFDKAR 7
E+FDK R
Sbjct: 51 EVFDKGR 57


>sp|PELO_SACI7|PROTEIN pelota homolog|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 FDKARQAA 10
FD+ RQAA
Sbjct: 6 FDEKRQAA 13


>sp|PELO_SACI6|PROTEIN pelota homolog|Saccharolobus islandicus (strain M.16.4 /

Query: 3 FDKARQAA 10
FD+ RQAA
Sbjct: 6 FDEKRQAA 13


>sp|PELO_SACI4|PROTEIN pelota homolog|Saccharolobus islandicus (strain M.14.25 /

Query: 3 FDKARQAA 10
FD+ RQAA
Sbjct: 6 FDEKRQAA 13


>sp|PELO_SACI3|PROTEIN pelota homolog|Saccharolobus islandicus (strain M.16.27)

Query: 3 FDKARQAA 10
FD+ RQAA
Sbjct: 6 FDEKRQAA 13


>sp|PELO_SACI2|PROTEIN pelota homolog|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 FDKARQAA 10
FD+ RQAA
Sbjct: 6 FDEKRQAA 13


>sp|PELO_SACI1|PROTEIN pelota homolog|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 FDKARQAA 10
FD+ RQAA
Sbjct: 6 FDEKRQAA 13


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 IFDKARQA 9
I DKAR+A
Sbjct: 722 ILDKAREA 729


>sp|RPO11_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo11|Thermococcus kodakarensis (strain

Query: 2 IFDKARQA 9
IFD+AR+
Sbjct: 78 IFDRAREV 85


>sp|THIC1_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 EIFDKARQAA 10
E+ D+AR+A
Sbjct: 250 ELIDRAREAG 259


>sp|HEM1_METST|GLUTAMYL-TRNA reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 FDKARQAA 10
+DKARQ A
Sbjct: 194 YDKARQLA 201


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 EIFDKARQAA 10
E+FD A+Q A
Sbjct: 237 ELFDLAKQRA 246




114|Sequence|566|575|ARQAAPCVLF

>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 ARQAAPCVLF 10
ARQ+APC++F
Sbjct: 541 ARQSAPCIIF 550


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ARQAAPCVLF 10
ARQ APCV+F
Sbjct: 544 ARQVAPCVIF 553


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ARQAAPCVLF 10
ARQAAP V+F
Sbjct: 576 ARQAAPTVIF 585


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 ARQAAPCVLF 10
ARQ AP V+F
Sbjct: 551 ARQVAPTVIF 560


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ARQAAPCVLF 10
A ++APC++F
Sbjct: 209 ASESAPCIVF 218


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ARQAAPCVLF 10
A++ +PC++F
Sbjct: 237 AKEKSPCIIF 246


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ARQAAPCVLF 10
A++ +PC++F
Sbjct: 237 AKEKSPCIIF 246


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 ARQAAPCVLF 10
A++ +PC++F
Sbjct: 237 AKEKSPCIIF 246


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 ARQAAPCVLF 10
A++ +PC++F
Sbjct: 237 AKEKSPCIIF 246


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 1 ARQAAPCVLF 10
A++ +PC++F
Sbjct: 237 AKEKSPCIIF 246


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ARQAAPCVLF 10
AR+ AP +LF
Sbjct: 228 AREKAPSILF 237


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ARQAAPCVLF 10
A+Q AP ++F
Sbjct: 556 AKQVAPAIVF 565


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 ARQAAPCVLF 10
AR+ AP ++F
Sbjct: 268 AREKAPSIIF 277


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 ARQAAPCVLF 10
A+Q AP ++F
Sbjct: 242 AKQRAPSIIF 251


>sp|Y1159_THEAC|UPF0179 protein Ta1159|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 QAAPCVLF 10
Q PC++F
Sbjct: 56 QVNPCIIF 63




115|Sequence|571|580|PCVLFFDELD

>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PCVLFFDELD 10
PCV+FFDE+D
Sbjct: 549 PCVIFFDEID 558


Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 276 PSIIFIDEID 285


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 PCVLFFDELD 10
PC++FFDE+D
Sbjct: 546 PCIIFFDEID 555


Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 273 PSIIFIDEID 282


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PCVLFFDELD 10
PC++F DELD
Sbjct: 214 PCIVFIDELD 223


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 PCVLFFDELD 10
P V+FFDELD
Sbjct: 556 PTVIFFDELD 565


Query: 1 PCVLFFDELD 10
P ++F DELD
Sbjct: 283 PSIIFIDELD 292


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PCVLFFDELD 10
PC++F DE+D
Sbjct: 242 PCIIFIDEID 251


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PCVLFFDELD 10
PC++F DE+D
Sbjct: 242 PCIIFIDEID 251


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 PCVLFFDELD 10
PC++F DE+D
Sbjct: 242 PCIIFIDEID 251


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 PCVLFFDELD 10
PC++F DE+D
Sbjct: 242 PCIIFIDEID 251


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 1 PCVLFFDELD 10
PC++F DE+D
Sbjct: 242 PCIIFIDEID 251


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PCVLFFDELD 10
P V+FFDE+D
Sbjct: 581 PTVIFFDEID 590


Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 306 PSIIFIDEID 315


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PCVLFFDELD 10
P ++F DELD
Sbjct: 253 PSIIFIDELD 262


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PCVLFFDELD 10
P ++F DELD
Sbjct: 253 PSIIFIDELD 262


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PCVLFFDELD 10
P +LF DE+D
Sbjct: 233 PSILFIDEID 242


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PCVLFFDELD 10
P ++F DELD
Sbjct: 235 PSIIFIDELD 244


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 1 PCVLFFDELD 10
P V+F DE+D
Sbjct: 244 PAVIFIDEID 253


>sp|T2M7_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 3 VLFFDELD 10
VLFF+ELD
Sbjct: 60 VLFFEELD 67


>sp|PAN2_METTH|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PCVLFFDELD 10
P V+F DE+D
Sbjct: 217 PSVIFIDEMD 226


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 233 PAIIFIDEID 242


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 561 PAIVFLDEID 570


Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 284 PSIIFIDEID 293


>sp|PAN2_METTM|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter marburgensis (strain ATCC

Query: 1 PCVLFFDELD 10
P V+F DE+D
Sbjct: 217 PSVIFIDEMD 226


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 PCVLFFDELD 10
P V+F DE+D
Sbjct: 242 PAVVFIDEID 251


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 202 PVIIFIDEID 211


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 232 PTIIFIDEID 241


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 232 PTIIFIDEID 241


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 234 PTIIFIDEID 243


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 231 PTIIFIDEID 240


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 231 PTIIFIDEID 240


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 272 PTIIFIDEID 281


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 228 PSIIFIDEID 237


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 228 PSIIFIDEID 237


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 228 PSIIFIDEID 237


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 228 PSIIFIDEID 237


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 228 PSIIFIDEID 237


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 228 PSIIFIDEID 237


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 228 PSIIFIDEID 237


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 245 PSIIFIDEID 254


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 247 PSIIFIDEID 256


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 247 PSIIFIDEID 256


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 253 PSIIFIDEID 262


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 264 PSIIFIDEID 273


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 228 PSIVFIDEID 237


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 247 PSIVFIDEID 256


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 1 PCVLFFDELD 10
P V+F DE+D
Sbjct: 246 PVVVFIDEID 255


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 273 PSIIFIDEID 282


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 PCVLFFDELD 10
P ++F DE+D
Sbjct: 246 PAIIFIDEID 255


>sp|RSMA_PYRAE|PROBABLE ribosomal RNA small subunit|Pyrobaculum aerophilum (strain ATCC

Query: 1 PCVLFFDELD 10
PCV FDE +
Sbjct: 176 PCVDNFDEFE 185


>sp|WECBH_METMP|UDP-N-ACETYLGLUCOSAMINE 2-epimerase homolog|Methanococcus maripaludis (strain DSM 14266

Query: 4 LFFDELD 10
+FFDEL+
Sbjct: 45 IFFDELE 51


>sp|PUR5_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 LFFDELD 10
+FFDEL+
Sbjct: 190 VFFDELE 196


>sp|Y692_METTH|UNCHARACTERIZED protein MTH_692|Methanothermobacter thermautotrophicus (strain

Query: 2 CVLFFDELD 10
CV+F++ +D
Sbjct: 83 CVIFYEVVD 91


>sp|Y774_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0774|Methanocaldococcus

Query: 2 CVLFFDELD 10
C++ DE D
Sbjct: 178 CIILIDEAD 186


>sp|Y182_METJA|UNCHARACTERIZED protein MJ0182|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VLFFDELD 10
++F DELD
Sbjct: 147 IIFIDELD 154


>sp|CDC6A_HALMA|ORC1-TYPE DNA replication protein 1|Haloarcula marismortui (strain ATCC 43049

Query: 2 CVLFFDELD 10
C++ DE+D
Sbjct: 144 CLIVLDEID 152




116|Sequence|576|585|FDELDSIAKA

>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FDELDSIA 8
FDE+DSIA
Sbjct: 586 FDEIDSIA 593


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 FDELDSIA 8
FDELDS+A
Sbjct: 561 FDELDSLA 568


Query: 2 DELDSIA 8
DELDSIA
Sbjct: 289 DELDSIA 295


>sp|MPNS_NITMS|METHYLPHOSPHONATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 FDELDSIAKA 10
FDEL IAKA
Sbjct: 284 FDELKIIAKA 293


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FDELDSIA 8
FDE+DS+A
Sbjct: 554 FDEIDSLA 561


Query: 2 DELDSIA 8
DE+DSIA
Sbjct: 282 DEIDSIA 288


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 FDELDSIA 8
FDE+D+IA
Sbjct: 551 FDEIDAIA 558


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DELDSIA 8
DELDSIA
Sbjct: 259 DELDSIA 265


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DELDSIA 8
DELDSIA
Sbjct: 259 DELDSIA 265


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FDELDSIA 8
DE+DSIA
Sbjct: 566 LDEIDSIA 573


Query: 2 DELDSIA 8
DE+DSIA
Sbjct: 290 DEIDSIA 296


>sp|PYRH_PYRCJ|URIDYLATE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 FDELDSIAK 9
FDE D +AK
Sbjct: 11 FDEEDLVAK 19


>sp|GGR1_METTH|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 ELDSIAKA 10
ELDSIA+A
Sbjct: 357 ELDSIAEA 364


>sp|SYG_PYRFU|GLYCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FDELDSIAK 9
+DE DSI K
Sbjct: 506 YDEKDSIGK 514


>sp|SYG_PYRHO|GLYCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FDELDSIAK 9
+DE DSI K
Sbjct: 508 YDEKDSIGK 516


>sp|SYG_PYRAB|GLYCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 FDELDSIAK 9
+DE DSI K
Sbjct: 508 YDEKDSIGK 516


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DELDSIA 8
DELD+IA
Sbjct: 241 DELDAIA 247




117|Sequence|581|590|SIAKARGGNI

>sp|GUAAA_METS3|GMP synthase [glutamine-hydrolyzing] subunit A|Methanobrevibacter

Query: 2 IAKARGGNI 10
IAKA GG I
Sbjct: 82 IAKAYGGQI 90


>sp|RS8E_IGNH4|SMALL ribosomal subunit protein eS8|Ignicoccus hospitalis (strain

Query: 1 SIAKARGGNI 10
I + RGGNI
Sbjct: 45 KIERVRGGNI 54


>sp|GLMS_PYRFU|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus furiosus (strain ATCC

Query: 3 AKARGGNI 10
AKARGG I
Sbjct: 528 AKARGGYI 535


>sp|GLMS_PYRHO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus horikoshii (strain ATCC

Query: 3 AKARGGNI 10
AKARGG I
Sbjct: 528 AKARGGFI 535


>sp|GUAAA_METTH|GMP synthase [glutamine-hydrolyzing] subunit A|Methanothermobacter

Query: 2 IAKARGGNI 10
IAKA GG +
Sbjct: 83 IAKAYGGEV 91


>sp|ORNAT_PYRHO|ORNITHINE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SIAKARGGNI 10
++AKA GG I
Sbjct: 290 TVAKALGGGI 299


>sp|GLMS_PYRAB|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus abyssi (strain GE5 /

Query: 3 AKARGGNI 10
AKARGG I
Sbjct: 528 AKARGGFI 535


>sp|GUAAA_META3|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus aeolicus

Query: 2 IAKARGGNI 10
IAKA GG I
Sbjct: 82 IAKAYGGEI 90


>sp|RS8E_PYRNV|SMALL ribosomal subunit protein eS8|Pyrobaculum neutrophilum (strain

Query: 2 IAKARGGNI 10
+ + RGGNI
Sbjct: 49 VERVRGGNI 57


>sp|RS8E_PYRAR|SMALL ribosomal subunit protein eS8|Pyrobaculum arsenaticum (strain DSM

Query: 2 IAKARGGNI 10
+ + RGGNI
Sbjct: 49 VERVRGGNI 57




118|Sequence|586|595|RGGNIGDGGG

>sp|RS4E_PYRIL|SMALL ribosomal subunit protein eS4|Pyrobaculum islandicum (strain DSM

Query: 1 RGGNIGDGG 9
RGGN+G G
Sbjct: 184 RGGNVGFSG 192


>sp|Y2205_ARCFU|UNCHARACTERIZED protein AF_2205|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RGGNIGDGGG 10
RGG +G G G
Sbjct: 287 RGGRLGKGSG 296


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 4 NIGDGGG 10
NIG GGG
Sbjct: 860 NIGKGGG 866


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 4 NIGDGGG 10
NIG GGG
Sbjct: 860 NIGKGGG 866


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 4 NIGDGGG 10
NIG GGG
Sbjct: 860 NIGKGGG 866


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 4 NIGDGGG 10
NIG GGG
Sbjct: 860 NIGKGGG 866


>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GGNIGDGG 9
GG IGD G
Sbjct: 542 GGQIGDTG 549


>sp|SYA_SULAC|ALANINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GGNIGDGG 9
GG IGD G
Sbjct: 544 GGQIGDTG 551


>sp|COXX_SULTO|PROTOHEME IX farnesyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GGNIGDGGG 10
GG++ GGG
Sbjct: 65 GGSLASGGG 73


>sp|CAPPA_THEPD|PHOSPHOENOLPYRUVATE carboxylase|Thermofilum pendens (strain DSM 2475

Query: 2 GGNIGDGGG 10
GG GD GG
Sbjct: 287 GGEPGDAGG 295


>sp|Y1307_METJA|UNCHARACTERIZED protein MJ1307|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GGNIGDGGG 10
GG+I GGG
Sbjct: 133 GGHITPGGG 141


>sp|RTCA_HYPBU|RNA 3'-terminal phosphate cyclase|Hyperthermus butylicus (strain DSM

Query: 3 GNIGDGGG 10
G+IG+GGG
Sbjct: 6 GSIGEGGG 13


>sp|RTCA_DESA1|RNA 3'-terminal phosphate cyclase|Desulfurococcus amylolyticus

Query: 3 GNIGDGGG 10
G+IG+GGG
Sbjct: 8 GSIGEGGG 15


>sp|TOP6B_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 5 IGDGGG 10
+GDGGG
Sbjct: 8 LGDGGG 13


>sp|IDH_ARCFU|ISOCITRATE dehydrogenase [NADP]|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GGNIGDGGG 10
G NIGDG G
Sbjct: 319 GSNIGDGIG 327


>sp|SQRD_ACIAM|SULFIDE-QUINONE reductase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 RGGNIGDGGG 10
+GGNI G G
Sbjct: 145 QGGNIAIGSG 154


>sp|NUSA_HALSA|PROBABLE transcription termination protein NusA|Halobacterium salinarum

Query: 2 GGNIGDGG 9
G IGDGG
Sbjct: 44 GAAIGDGG 51


>sp|NUSA_HALS3|PROBABLE transcription termination protein NusA|Halobacterium salinarum

Query: 2 GGNIGDGG 9
G IGDGG
Sbjct: 44 GAAIGDGG 51


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GGNIGDGG 9
GG +GD G
Sbjct: 541 GGQLGDTG 548


>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 GGNIGDGG 9
GG +GD G
Sbjct: 541 GGQLGDTG 548


>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 GGNIGDGG 9
GG +GD G
Sbjct: 541 GGQLGDTG 548


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 GGNIGDGG 9
GG +GD G
Sbjct: 541 GGQLGDTG 548


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 GGNIGDGG 9
GG +GD G
Sbjct: 541 GGQLGDTG 548


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 GGNIGDGG 9
GG +GD G
Sbjct: 541 GGQLGDTG 548


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 GGNIGDGG 9
GG +GD G
Sbjct: 541 GGQLGDTG 548


>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 GGNIGDGG 9
GG +GD G
Sbjct: 540 GGQLGDQG 547


>sp|Y1337_METJA|UNCHARACTERIZED protein MJ1337|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GNIGDGGG 10
G+IG+G G
Sbjct: 23 GDIGEGDG 30


>sp|AGL10_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl10|Haloferax volcanii

Query: 2 GGNIGDGGG 10
GGN G GG
Sbjct: 72 GGNHGYSGG 80




119|Sequence|591|600|GDGGGAADRV

>sp|MUTS2_PYRFU|DNA-BINDING protein MutS2|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GGAADRV 10
GGAAD++
Sbjct: 156 GGAADKI 162


>sp|RNZ_METS5|RIBONUCLEASE Z|Metallosphaera sedula (strain ATCC 51363

Query: 1 GDGGGAADR 9
G GGGA R
Sbjct: 8 GTGGGAPSR 16


>sp|RRP4_AERPE|EXOSOME complex component Rrp4|Aeropyrum pernix (strain ATCC 700893

Query: 1 GDGGGAA 7
GDGGG A
Sbjct: 48 GDGGGRA 54


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GGGAADRV 10
GGG DR+
Sbjct: 460 GGGPIDRI 467


>sp|RTCA_METTH|RNA 3'-terminal phosphate cyclase|Methanothermobacter

Query: 1 GDGGGAADRV 10
G+GGGA RV
Sbjct: 9 GEGGGAVVRV 18


>sp|MCRC_METJA|METHYL-COENZYME M reductase I operon|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GDGGGAADR 9
G+GGG A R
Sbjct: 19 GEGGGLAQR 27


>sp|RL10E_PYRNV|LARGE ribosomal subunit protein uL16|Pyrobaculum neutrophilum (strain DSM

Query: 1 GDGGGAA 7
GDGGG A
Sbjct: 172 GDGGGKA 178


>sp|MCRC_METVA|METHYL-COENZYME M reductase operon protein|Methanococcus vannielii

Query: 1 GDGGGAADR 9
G+GGG A R
Sbjct: 19 GEGGGLAQR 27




120|Sequence|596|605|AADRVINQIL

>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 ADRVINQI 9
ADRVIN I
Sbjct: 382 ADRVINVI 389


>sp|SYR_AERPE|ARGININE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 AADRVINQI 9
ADRVIN I
Sbjct: 398 GADRVINVI 406


>sp|ARTA_NATPD|ARCHAEOSORTASE A|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ADRVINQIL 10
ADRV+ Q+L
Sbjct: 257 ADRVLAQLL 265


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 2 ADRVINQIL 10
++RV+NQ+L
Sbjct: 580 SERVVNQLL 588


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 3 DRVINQIL 10
D+V+NQ+L
Sbjct: 571 DKVVNQLL 578


>sp|HEM1_HALWD|GLUTAMYL-TRNA reductase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 ADRVINQIL 10
AD +INQ+L
Sbjct: 374 ADTLINQLL 382




121|Sequence|601|610|INQILTEMDG

>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 INQILTEMDG 10
+NQ+LTE+DG
Sbjct: 574 VNQLLTELDG 583


Query: 1 INQILTEMDG 10
+ Q+LT MDG
Sbjct: 300 VAQLLTLMDG 309


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 INQILTEMDG 10
+NQ+L EMDG
Sbjct: 609 VNQLLAEMDG 618


Query: 1 INQILTEMDG 10
+ Q+LT MDG
Sbjct: 333 VAQLLTLMDG 342


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 INQILTEMDG 10
+NQ+LTE+DG
Sbjct: 584 VNQLLTELDG 593


Query: 1 INQILTEMDG 10
+ Q+LT MDG
Sbjct: 310 VAQLLTMMDG 319


>sp|PAN2_METTH|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 INQILTEMDG 10
+N +LTEMDG
Sbjct: 245 VNALLTEMDG 254


>sp|PAN2_METTM|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter marburgensis (strain ATCC

Query: 1 INQILTEMDG 10
+N +LTEMDG
Sbjct: 245 VNALLTEMDG 254


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 INQILTEMDG 10
++Q+LTE+DG
Sbjct: 577 VSQLLTELDG 586


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 INQILTEMDG 10
+N +LTE+DG
Sbjct: 242 VNALLTELDG 251


>sp|ENO_METTP|ENOLASE thermoacetophila (strain DSM 6194

Query: 1 INQILTEMDG 10
++QI+ EMDG
Sbjct: 89 VDQIMIEMDG 98


>sp|Y1094_HALWD|PUTATIVE heme-binding protein HQ_1094A|Haloquadratum walsbyi (strain DSM

Query: 1 INQILTEMDG 10
+ ILTEMDG
Sbjct: 464 VGGILTEMDG 473


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 INQILTEMDG 10
+NQ+LT +DG
Sbjct: 589 VNQLLTSLDG 598


Query: 1 INQILTEMDG 10
+ Q+LT MDG
Sbjct: 311 VAQLLTLMDG 320


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 NQILTEMDG 10
NQ L EMDG
Sbjct: 229 NQFLKEMDG 237


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 INQILTEMDG 10
+ Q+L EMDG
Sbjct: 303 LTQLLAEMDG 312


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 QILTEMDG 10
Q+L EMDG
Sbjct: 264 QLLAEMDG 271


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 QILTEMDG 10
Q+L EMDG
Sbjct: 263 QLLAEMDG 270


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 QILTEMDG 10
Q+L EMDG
Sbjct: 279 QLLAEMDG 286


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 QILTEMDG 10
Q+L EMDG
Sbjct: 279 QLLAEMDG 286


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 3 QILTEMDG 10
Q+L+EMDG
Sbjct: 278 QLLSEMDG 285


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 QILTEMDG 10
Q+L EMDG
Sbjct: 266 QLLAEMDG 273


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 QILTEMDG 10
Q+L EMDG
Sbjct: 264 QLLAEMDG 271


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 3 QILTEMDG 10
Q+L EMDG
Sbjct: 263 QLLAEMDG 270


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 3 QILTEMDG 10
Q+L EMDG
Sbjct: 276 QLLAEMDG 283


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 3 QILTEMDG 10
Q+L EMDG
Sbjct: 265 QLLAEMDG 272


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 3 QILTEMDG 10
Q+L+EMDG
Sbjct: 278 QLLSEMDG 285


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 3 QILTEMDG 10
Q+L+EMDG
Sbjct: 274 QLLSEMDG 281


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 3 QILTEMDG 10
Q+L EMDG
Sbjct: 274 QLLAEMDG 281


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 QILTEMDG 10
Q+L EMDG
Sbjct: 285 QLLAEMDG 292


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QILTEMDG 10
Q+L EMDG
Sbjct: 296 QLLAEMDG 303


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 3 QILTEMDG 10
Q+L EMDG
Sbjct: 285 QLLAEMDG 292


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 QILTEMDG 10
Q+L EMDG
Sbjct: 285 QLLAEMDG 292


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 3 QILTEMDG 10
Q+L EMDG
Sbjct: 274 QLLAEMDG 281


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 3 QILTEMDG 10
Q+L EMDG
Sbjct: 274 QLLAEMDG 281


>sp|Y505_METJA|UNCHARACTERIZED protein MJ0505|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NQILTEMDG 10
N+++TE DG
Sbjct: 172 NKMITEKDG 180


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 3 QILTEMDG 10
Q+L EMDG
Sbjct: 274 QLLAEMDG 281


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 3 QILTEMDG 10
Q+L EMDG
Sbjct: 274 QLLAEMDG 281


>sp|AATA_METBF|A-TYPE ATP synthase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 1 INQILTEMD 9
+N +LT+MD
Sbjct: 561 MNAVLTQMD 569


>sp|Y1154_METJA|UNCHARACTERIZED protein MJ1154|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 INQILTEMD 9
IN+IL E+D
Sbjct: 374 INKILKELD 382


>sp|PYRB_CALMQ|ASPARTATE carbamoyltransferase catalytic subunit|Caldivirga maquilingensis

Query: 1 INQILTEMD 9
+N++L+E+D
Sbjct: 213 LNEVLSELD 221


>sp|AMPPA_METM6|AMP phosphorylase|Methanococcus maripaludis (strain C6 /

Query: 2 NQILTEMDG 10
NQI+TE G
Sbjct: 394 NQIITEQGG 402


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QILTEMDG 10
Q+L E+DG
Sbjct: 267 QLLAELDG 274


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 3 QILTEMDG 10
Q+L E+DG
Sbjct: 265 QLLAELDG 272




122|Sequence|606|615|TEMDGMSTKK

>sp|RFCL_THEPD|REPLICATION factor C large subunit|Thermofilum pendens (strain DSM 2475

Query: 2 EMDGMSTKK 10
E+DG+STK+
Sbjct: 114 EVDGISTKE 122


>sp|RADA_METJA|DNA repair and recombination protein|Methanocaldococcus jannaschii

Query: 1 TEMDGMSTK 9
TE+DG+S K
Sbjct: 70 TEIDGISEK 78




123|Sequence|611|620|MSTKKNVFII

>sp|SYR_METST|ARGININE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 MSTKKNVFI 9
MST+K VFI
Sbjct: 368 MSTRKGVFI 376


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 MSTKKNVFI 9
MST++ VFI
Sbjct: 369 MSTRRGVFI 377


>sp|SYR_METS3|ARGININE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 MSTKKNVFI 9
MST+K VF+
Sbjct: 382 MSTRKGVFV 390


>sp|DCDA_METJA|DIAMINOPIMELATE decarboxylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MSTKKNVFII 10
+++KK VF+I
Sbjct: 409 LTSKKGVFLI 418




124|Sequence|616|625|NVFIIGATNR

>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NVFIIGATNR 10
+V +IGATNR
Sbjct: 326 HVIVIGATNR 335


Query: 2 VFIIGATNR 10
V +IGATNR
Sbjct: 605 VVVIGATNR 613


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 NVFIIGATNR 10
+V IIGATNR
Sbjct: 292 DVRIIGATNR 301


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VFIIGATNR 10
V +IGATNR
Sbjct: 349 VIVIGATNR 357


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NVFIIGATNR 10
+V IIGATNR
Sbjct: 309 DVKIIGATNR 318


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 NVFIIGATNR 10
+V IIGATNR
Sbjct: 292 DVKIIGATNR 301


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 1 NVFIIGATNR 10
+V IIGATNR
Sbjct: 317 DVKIIGATNR 326


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VFIIGATNR 10
V++IGATN+
Sbjct: 247 VYVIGATNK 255


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 2 VFIIGATNR 10
V +IGATNR
Sbjct: 316 VVVIGATNR 324


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NVFIIGATNR 10
+V +IGATNR
Sbjct: 280 DVKVIGATNR 289


>sp|GLCD1_VULM7|GLUCOSE 1-dehydrogenase 1|Vulcanisaeta moutnovskia (strain 768-28)

Query: 1 NVFIIGATN 9
N IIGATN
Sbjct: 286 NKLIIGATN 294


>sp|KPRS_THEVO|RIBOSE-PHOSPHATE pyrophosphokinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NVFIIGATN 9
N+FIIG T+
Sbjct: 49 NIFIIGNTH 57


>sp|PCNA3_SACS2|DNA polymerase sliding clamp 3|Saccharolobus solfataricus (strain ATCC

Query: 4 IIGATNR 10
IIG+TNR
Sbjct: 101 IIGSTNR 107


>sp|NADE_THEVO|NH(3)-DEPENDENT NAD(+) synthetase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NVFIIGATNR 10
N ++G TNR
Sbjct: 123 NGIVVGTTNR 132


>sp|GLMS_PYRAE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrobaculum aerophilum (strain ATCC

Query: 1 NVFIIGA 7
NV+I+GA
Sbjct: 293 NVYIVGA 299


>sp|NADE_PICTO|NH(3)-DEPENDENT NAD(+) synthetase|Picrophilus torridus (strain ATCC 700027

Query: 1 NVFIIGATNR 10
N ++G TNR
Sbjct: 124 NGLVVGTTNR 133


>sp|CSG_METTL|S-LAYER protein|Methanothermococcus thermolithotrophicus

Query: 1 NVFIIGATN 9
N+F + ATN
Sbjct: 103 NIFTLNATN 111




125|Sequence|621|630|GATNRPDIID

>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GATNRPDIID 10
GATNRPDI+D
Sbjct: 314 GATNRPDILD 323


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GATNRPDIID 10
GATNRPDI+D
Sbjct: 609 GATNRPDIMD 618


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 GATNRPDIID 10
ATNRPDIID
Sbjct: 594 AATNRPDIID 603


Query: 1 GATNRPDIID 10
GATNRP+ +D
Sbjct: 320 GATNRPNALD 329


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GATNRPDIID 10
GATNRPD ID
Sbjct: 353 GATNRPDAID 362


Query: 1 GATNRPDIID 10
ATNRPDI+D
Sbjct: 629 AATNRPDILD 638


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 GATNRPDIID 10
ATNRPDIID
Sbjct: 604 AATNRPDIID 613


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 1 GATNRPDIID 10
ATNRPDI+D
Sbjct: 283 AATNRPDILD 292


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GATNRPDIID 10
ATNRPDI+D
Sbjct: 295 AATNRPDILD 304


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GATNRPDIID 10
ATNRPDI+D
Sbjct: 284 AATNRPDILD 293


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GATNRPDIID 10
ATNRPDI+D
Sbjct: 281 AATNRPDILD 290


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 GATNRPDIID 10
ATNRPDI+D
Sbjct: 281 AATNRPDILD 290


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GATNRPDIID 10
ATNRPDI+D
Sbjct: 282 AATNRPDILD 291


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GATNRPDIID 10
ATNRPDI+D
Sbjct: 303 AATNRPDILD 312


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GATNRPDIID 10
ATNRPDI+D
Sbjct: 282 AATNRPDILD 291


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GATNRPDIID 10
ATNRPD++D
Sbjct: 303 AATNRPDVLD 312


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GATNRPDIID 10
ATNRPDI+D
Sbjct: 292 AATNRPDILD 301


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 GATNRPDIID 10
ATNRPDI+D
Sbjct: 292 AATNRPDILD 301


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GATNRPDIID 10
ATNRPD+ID
Sbjct: 597 AATNRPDMID 606


Query: 1 GATNRPDIID 10
ATNRPD ID
Sbjct: 323 AATNRPDAID 332


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GATNRPDIID 10
ATNRPDI+D
Sbjct: 292 AATNRPDILD 301


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 GATNRPDIID 10
ATNRPDI+D
Sbjct: 292 AATNRPDILD 301


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GATNRPDIID 10
ATNRPD++D
Sbjct: 303 AATNRPDVLD 312


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 1 GATNRPDIID 10
ATNRPDI+D
Sbjct: 292 AATNRPDILD 301


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GATNRPDIID 10
GATNR DI+D
Sbjct: 297 GATNRIDILD 306


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GATNRPDIID 10
GATNR DI+D
Sbjct: 285 GATNRIDILD 294


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GATNRPDIID 10
GATNR DI+D
Sbjct: 297 GATNRIDILD 306


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 1 GATNRPDIID 10
GATNR DI+D
Sbjct: 322 GATNRIDILD 331


>sp|PAN2_METTH|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GATNRPDIID 10
GATN P+++D
Sbjct: 265 GATNNPELLD 274


>sp|PAN2_METTM|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter marburgensis (strain ATCC

Query: 1 GATNRPDIID 10
GATN P+++D
Sbjct: 265 GATNNPELLD 274


>sp|PUS10_NITMS|TRNA pseudouridine synthase Pus10|Nitrosopumilus maritimus (strain

Query: 1 GATNRPDIID 10
GAT +P IID
Sbjct: 87 GATIKPSIID 96


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 GATNRPDIID 10
ATNR DI+D
Sbjct: 323 AATNRKDILD 332


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GATNRPDIID 10
ATNR D+ID
Sbjct: 283 AATNRLDLID 292


>sp|Y1542_METJA|UNCHARACTERIZED protein MJ1542|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ATNRPDII 9
A N+PDI+
Sbjct: 455 ANNKPDIV 462


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GATNRPDIID 10
ATNR DI+D
Sbjct: 278 AATNRIDILD 287


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GATNRPDIID 10
ATNR DI+D
Sbjct: 278 AATNRIDILD 287


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GATNRPDIID 10
ATNR DI+D
Sbjct: 278 AATNRIDILD 287


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GATNRPDIID 10
ATNR DI+D
Sbjct: 278 AATNRIDILD 287


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 GATNRPDIID 10
ATNR DI+D
Sbjct: 278 AATNRIDILD 287


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GATNRPDIID 10
ATNR DI+D
Sbjct: 278 AATNRIDILD 287


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GATNRPDIID 10
ATNR DI+D
Sbjct: 297 AATNRIDILD 306


>sp|GATD_METS5|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Metallosphaera sedula (strain ATCC 51363

Query: 5 RPDIID 10
RPDI+D
Sbjct: 314 RPDIVD 319


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GATNRPDIID 10
ATNR DI+D
Sbjct: 278 AATNRIDILD 287


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GATNRPDIID 10
ATNR DI+D
Sbjct: 278 AATNRLDILD 287


>sp|SYFB_THEON|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus onnurineus (strain NA1)

Query: 3 TNRPDI 8
TNRPD+
Sbjct: 54 TNRPDL 59


>sp|RPO3_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum aerophilum (strain ATCC

Query: 2 ATNRPDII 9
A++RPD++
Sbjct: 113 ASDRPDVV 120


>sp|SYFB_PYRAB|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 TNRPDI 8
TNRPD+
Sbjct: 54 TNRPDL 59


>sp|SYFB_THEKO|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 TNRPDI 8
TNRPD+
Sbjct: 54 TNRPDL 59


>sp|SYFB_PYRHO|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 TNRPDI 8
TNRPD+
Sbjct: 54 TNRPDL 59


>sp|SYFB_PYRFU|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 TNRPDI 8
TNRPD+
Sbjct: 54 TNRPDL 59


>sp|SYFB_THEGJ|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 3 TNRPDI 8
TNRPD+
Sbjct: 54 TNRPDL 59


>sp|SYFB_THESM|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus sibiricus (strain DSM 12597

Query: 3 TNRPDI 8
TNRPD+
Sbjct: 54 TNRPDL 59


>sp|CCA_PICTO|CCA-ADDING enzyme|Picrophilus torridus (strain ATCC 700027

Query: 5 RPDIID 10
RPDIID
Sbjct: 279 RPDIID 284


>sp|ADEC_METST|ADENINE deaminase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GATNRPDIID 10
GAT P+IID
Sbjct: 121 GATISPNIID 130


>sp|TOP6B_METMA|TYPE 2 DNA topoisomerase 6|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ATNRPDII 9
+TN PDI+
Sbjct: 154 STNEPDIL 161


>sp|TOP6B_METBF|TYPE 2 DNA topoisomerase 6|Methanosarcina barkeri (strain Fusaro /

Query: 2 ATNRPDII 9
+TN PDI+
Sbjct: 154 STNEPDIL 161


>sp|FLAD_METJA|PUTATIVE flagella-related protein D|Methanocaldococcus jannaschii (strain

Query: 1 GATNRPDIID 10
G T PDI+D
Sbjct: 250 GMTYLPDILD 259


>sp|TOP6B_METAC|TYPE 2 DNA topoisomerase 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ATNRPDII 9
+TN PDI+
Sbjct: 154 STNEPDIL 161


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ATNRPDII 9
AT+RP++I
Sbjct: 221 ATSRPELI 228


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GATNRPDIID 10
GATN+P +D
Sbjct: 251 GATNKPWRLD 260


>sp|NADK_METHJ|NAD kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 TNRPDIID 10
+NRP +ID
Sbjct: 200 SNRPHLID 207


>sp|DNAJ_PICTO|CHAPERONE protein DnaJ|Picrophilus torridus (strain ATCC 700027

Query: 1 GATNRPDI 8
G TN+PD+
Sbjct: 109 GYTNQPDL 116


>sp|DNAG_METMA|DNA primase DnaG|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GATNRPDII 9
G RPDI+
Sbjct: 19 GVIERPDIV 27


>sp|DNAG_THEKO|DNA primase DnaG|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GATNRPDII 9
G RPD++
Sbjct: 46 GVVERPDVV 54


>sp|DNAG_PYRFU|DNA primase DnaG|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GATNRPDII 9
G RPD++
Sbjct: 48 GVVERPDVV 56


>sp|DNAG_THEGJ|DNA primase DnaG|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GATNRPDII 9
G RPD++
Sbjct: 47 GVVERPDVV 55


>sp|DNAG_PYRHO|DNA primase DnaG|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GATNRPDII 9
G RPD++
Sbjct: 48 GVVERPDVV 56




126|Sequence|626|635|PDIIDPAILR

>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PDIIDPAILR 10
PDI+DPAILR
Sbjct: 319 PDILDPAILR 328


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 1 PDIIDPAILR 10
PDI+DPAILR
Sbjct: 297 PDILDPAILR 306


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PDIIDPAILR 10
PDI+DPAILR
Sbjct: 297 PDILDPAILR 306


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 PDIIDPAILR 10
PDIIDPA+LR
Sbjct: 599 PDIIDPALLR 608


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PDIIDPAILR 10
PD++DPAILR
Sbjct: 308 PDVLDPAILR 317


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 PDIIDPAILR 10
PDI+DPAILR
Sbjct: 297 PDILDPAILR 306


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PDIIDPAILR 10
PD++DPAILR
Sbjct: 308 PDVLDPAILR 317


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PDIIDPAILR 10
PDI+DPAILR
Sbjct: 297 PDILDPAILR 306


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 PDIIDPAILR 10
PDI+DPAILR
Sbjct: 297 PDILDPAILR 306


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PDIIDPAILR 10
PDI+DPA+LR
Sbjct: 300 PDILDPALLR 309


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 1 PDIIDPAILR 10
PDI+DPA+LR
Sbjct: 288 PDILDPALLR 297


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PDIIDPAILR 10
PDI+DPA+LR
Sbjct: 289 PDILDPALLR 298


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PDIIDPAILR 10
PDI+DPA+LR
Sbjct: 614 PDIMDPALLR 623


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PDIIDPAILR 10
PDI+DPA+LR
Sbjct: 287 PDILDPALLR 296


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PDIIDPAILR 10
PDI+DPA+LR
Sbjct: 287 PDILDPALLR 296


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PDIIDPAILR 10
PDI+DPA+LR
Sbjct: 286 PDILDPALLR 295


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 PDIIDPAILR 10
PDI+DPA+LR
Sbjct: 286 PDILDPALLR 295


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PDIIDPAILR 10
PDI+DPA+LR
Sbjct: 634 PDILDPALLR 643


Query: 1 PDIIDPAILR 10
PD IDPA+ R
Sbjct: 358 PDAIDPALRR 367


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PDIIDPAILR 10
PD+IDPA+LR
Sbjct: 602 PDMIDPALLR 611


Query: 1 PDIIDPAILR 10
PD IDPA+ R
Sbjct: 328 PDAIDPALRR 337


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PDIIDPAILR 10
PDI+DPA+LR
Sbjct: 308 PDILDPALLR 317


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 PDIIDPAILR 10
PDIIDPA++R
Sbjct: 609 PDIIDPALIR 618


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DIIDPAILR 10
DI+DPAILR
Sbjct: 291 DILDPAILR 299


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 2 DIIDPAILR 10
D+IDPA+LR
Sbjct: 289 DLIDPAVLR 297


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 2 DIIDPAILR 10
DI+DPA+LR
Sbjct: 329 DILDPALLR 337


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DIIDPAILR 10
DI+DPA+LR
Sbjct: 284 DILDPALLR 292


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DIIDPAILR 10
DI+DPA+LR
Sbjct: 284 DILDPALLR 292


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 2 DIIDPAILR 10
D++DPAILR
Sbjct: 300 DMLDPAILR 308


>sp|ILVC_ARCFU|KETOL-ACID reductoisomerase (NAD(P)(+))|Archaeoglobus fulgidus (strain ATCC

Query: 1 PDIIDPAILR 10
PD++ PA+ R
Sbjct: 83 PDMVQPAVYR 92


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 DIIDPAILR 10
DI+DPA+LR
Sbjct: 284 DILDPALLR 292


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 DIIDPAILR 10
DI+DPA+LR
Sbjct: 284 DILDPALLR 292


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 DIIDPAILR 10
DI+DPA+LR
Sbjct: 284 DILDPALLR 292


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 DIIDPAILR 10
DI+DPA+LR
Sbjct: 284 DILDPALLR 292


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 DIIDPAILR 10
DI+DPA+LR
Sbjct: 284 DILDPALLR 292


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 DIIDPAILR 10
DI+DPA+LR
Sbjct: 284 DILDPALLR 292


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PDIIDPAILR 10
P+I+DP I R
Sbjct: 712 PEIVDPEIER 721


>sp|CBIA_SACS2|COBYRINATE a,c-diamide synthase|Saccharolobus solfataricus (strain ATCC

Query: 1 PDIIDPA 7
PD IDP
Sbjct: 39 PDFIDPG 45


>sp|CBIA_SULTO|COBYRINATE a,c-diamide synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PDIIDP 6
PD IDP
Sbjct: 41 PDFIDP 46


>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PDIIDP 6
PD IDP
Sbjct: 41 PDFIDP 46


>sp|CBIA_METTH|COBYRINATE a,c-diamide synthase|Methanothermobacter thermautotrophicus

Query: 1 PDIIDPA 7
PD IDP+
Sbjct: 37 PDYIDPS 43


>sp|CBIA_METST|COBYRINATE a,c-diamide synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PDIIDPA 7
PD IDP+
Sbjct: 39 PDYIDPS 45


>sp|MVK_THESM|MEVALONATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 PDIIDPAI 8
P+IIDP +
Sbjct: 213 PEIIDPIL 220


>sp|ILVC_HALMA|KETOL-ACID reductoisomerase (NADP(+))|Haloarcula marismortui (strain ATCC

Query: 1 PDIIDPAI 8
PD I PA+
Sbjct: 87 PDTIQPAV 94


>sp|PURA_HALMA|ADENYLOSUCCINATE synthetase|Haloarcula marismortui (strain ATCC 43049

Query: 2 DIIDPAILR 10
D++DP +LR
Sbjct: 148 DLLDPDVLR 156


>sp|MVK_THEGJ|MEVALONATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PDIIDPAIL 9
P+II+P +L
Sbjct: 214 PEIIEPILL 222


>sp|CBIA_THEAC|COBYRINATE a,c-diamide synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PDIIDPAILR 10
PD IDP R
Sbjct: 42 PDYIDPQFHR 51


>sp|CBIA_ARCFU|COBYRINATE a,c-diamide synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PDIIDPA 7
PD IDP
Sbjct: 47 PDFIDPG 53


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 2 DIIDPAILR 10
DI+D A+LR
Sbjct: 328 DILDKALLR 336


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DIIDPAILR 10
DI+D A+LR
Sbjct: 303 DILDAALLR 311


>sp|CBIA_HALMA|COBYRINATE a,c-diamide synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PDIIDPA 7
PD IDP+
Sbjct: 40 PDFIDPS 46


>sp|AMPA_CENSY|PROBABLE cytosol aminopeptidase|Cenarchaeum symbiosum (strain A)

Query: 1 PDIIDPA 7
P I+DPA
Sbjct: 108 PSILDPA 114


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 DIIDPAILR 10
DI+D A+LR
Sbjct: 303 DILDRALLR 311


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 DIIDPAILR 10
DI+D A+LR
Sbjct: 303 DILDRALLR 311


>sp|HPRL2_NATMM|HGPRTASE-LIKE protein 2|Natrialba magadii (strain ATCC 43099

Query: 3 IIDPAILR 10
++DPA+LR
Sbjct: 32 MLDPALLR 39


>sp|PIMT_PYRAE|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 DIIDPAILR 10
D+I PA++R
Sbjct: 153 DVIPPALIR 161


>sp|CBIA_HALSA|COBYRINATE a,c-diamide synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PDIIDPA 7
PD IDP+
Sbjct: 49 PDFIDPS 55




127|Sequence|631|640|PAILRPGRLD

>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 1 PAILRPGRLD 10
PAILRPGR D
Sbjct: 304 PAILRPGRFD 313


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 PAILRPGRLD 10
PA+LRPGRLD
Sbjct: 604 PALLRPGRLD 613


Query: 1 PAILRPGRLD 10
PA+ RPGR D
Sbjct: 330 PALRRPGRFD 339


>sp|PAN_METM7|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C7 /

Query: 1 PAILRPGRLD 10
PAILRPGR D
Sbjct: 302 PAILRPGRFD 311


>sp|PAN_METVS|PROTEASOME-ACTIVATING nucleotidase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PAILRPGRLD 10
PAILRPGR D
Sbjct: 302 PAILRPGRFD 311


>sp|PAN_METMP|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PAILRPGRLD 10
PAILRPGR D
Sbjct: 302 PAILRPGRFD 311


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PAILRPGRLD 10
PAILRPGR D
Sbjct: 313 PAILRPGRFD 322


>sp|PAN_METM6|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C6 /

Query: 1 PAILRPGRLD 10
PAILRPGR D
Sbjct: 302 PAILRPGRFD 311


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PAILRPGRLD 10
PAILRPGR D
Sbjct: 313 PAILRPGRFD 322


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PAILRPGRLD 10
PAILRPGR D
Sbjct: 295 PAILRPGRFD 304


>sp|PAN_METM5|PROTEASOME-ACTIVATING nucleotidase|Methanococcus maripaludis (strain C5 /

Query: 1 PAILRPGRLD 10
PAILRPGR D
Sbjct: 302 PAILRPGRFD 311


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PAILRPGRLD 10
PAILRPGR D
Sbjct: 324 PAILRPGRFD 333


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PAILRPGRLD 10
PA+LRPGR D
Sbjct: 293 PAVLRPGRFD 302


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PAILRPGRLD 10
PA+LRPGR D
Sbjct: 305 PALLRPGRFD 314


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 PAILRPGRLD 10
PA+LRPGR D
Sbjct: 288 PALLRPGRFD 297


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 PAILRPGRLD 10
PA+LRPGR D
Sbjct: 288 PALLRPGRFD 297


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PAILRPGRLD 10
PA+LRPGR D
Sbjct: 288 PALLRPGRFD 297


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PAILRPGRLD 10
PA+LRPGR D
Sbjct: 288 PALLRPGRFD 297


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 PAILRPGRLD 10
PA+LRPGR D
Sbjct: 288 PALLRPGRFD 297


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PAILRPGRLD 10
PA+LRPGR D
Sbjct: 288 PALLRPGRFD 297


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PAILRPGRLD 10
PA+LRPGR D
Sbjct: 288 PALLRPGRFD 297


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 PAILRPGRLD 10
PA+LRPGR D
Sbjct: 333 PALLRPGRFD 342


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PAILRPGRLD 10
PA+LRPGR D
Sbjct: 313 PALLRPGRFD 322


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PAILRPGRLD 10
PA+LRPGR D
Sbjct: 639 PALLRPGRFD 648


Query: 1 PAILRPGRLD 10
PA+ RPGR D
Sbjct: 363 PALRRPGRFD 372


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PAILRPGRLD 10
PA+LRPGR D
Sbjct: 288 PALLRPGRFD 297


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 1 PAILRPGRLD 10
PA+LRPGR D
Sbjct: 293 PALLRPGRFD 302


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PAILRPGRLD 10
PA+LRPGR D
Sbjct: 294 PALLRPGRFD 303


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PAILRPGRLD 10
PA+LRPGR D
Sbjct: 292 PALLRPGRFD 301


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PAILRPGRLD 10
PA+LRPGR D
Sbjct: 292 PALLRPGRFD 301


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 PAILRPGRLD 10
PA+LRPGR D
Sbjct: 291 PALLRPGRFD 300


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PAILRPGRLD 10
PA+LRPGR D
Sbjct: 291 PALLRPGRFD 300


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PAILRPGRLD 10
PA+LRPGRL+
Sbjct: 607 PALLRPGRLE 616


Query: 1 PAILRPGRLD 10
PA+ RPGR D
Sbjct: 333 PALRRPGRFD 342


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 AILRPGRLD 10
AILRPGR D
Sbjct: 303 AILRPGRFD 311


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 AILRPGRLD 10
AILRPGR D
Sbjct: 307 AILRPGRFD 315


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 2 AILRPGRLD 10
AILRPGR D
Sbjct: 307 AILRPGRFD 315


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 AILRPGRLD 10
A+LRPGR D
Sbjct: 308 ALLRPGRFD 316


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 AILRPGRLD 10
A+LRPGR D
Sbjct: 308 ALLRPGRFD 316


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 AILRPGRLD 10
A+LRPGR D
Sbjct: 308 ALLRPGRFD 316


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 2 AILRPGRLD 10
A+LRPGR D
Sbjct: 333 ALLRPGRFD 341


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PAILRPGRLD 10
PA+ RPGR D
Sbjct: 341 PALRRPGRFD 350


Query: 1 PAILRPGRLD 10
PA+LR GR D
Sbjct: 619 PALLRAGRFD 628


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 PAILRPGRLD 10
PA+ RPGR D
Sbjct: 340 PALRRPGRFD 349


Query: 1 PAILRPGRLD 10
PA++R GR D
Sbjct: 614 PALIRSGRFD 623


>sp|PMDHL_METMA|PHOSPHOMEVALONATE dehydratase large subunit|Methanosarcina mazei (strain ATCC

Query: 1 PAILRPGRLD 10
PAIL P +D
Sbjct: 72 PAILNPAGMD 81


>sp|GLNK1_METMA|NITROGEN regulatory protein GlnK1|Methanosarcina mazei (strain ATCC

Query: 2 AILRPGRLD 10
A++RP RLD
Sbjct: 9 AMIRPERLD 17


>sp|GGGPS_METM6|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C6 /

Query: 1 PAILRPGRLD 10
P IL PG +D
Sbjct: 73 PTILFPGNVD 82


>sp|GGGPS_METVS|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PAILRPGRLD 10
P IL PG +D
Sbjct: 73 PVILFPGNVD 82


>sp|GGGPS_METM7|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C7 /

Query: 1 PAILRPGRLD 10
P IL PG +D
Sbjct: 73 PVILFPGNVD 82


>sp|GGGPS_METM5|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C5 /

Query: 1 PAILRPGRLD 10
P IL PG +D
Sbjct: 73 PVILFPGNVD 82


>sp|SYR_AERPE|ARGININE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 AILRPGRL 9
A++RPGRL
Sbjct: 500 ALVRPGRL 507


>sp|DOXD_ACIAM|THIOSULFATE dehydrogenase [quinone] large subunit|Acidianus ambivalens

Query: 2 AILRPGRLD 10
A+L+P +LD
Sbjct: 40 AVLKPAKLD 48


>sp|AMPD_AERPE|ANHYDROMEVALONATE phosphate decarboxylase|Aeropyrum pernix (strain ATCC 700893

Query: 2 AILRPGRLD 10
+ +RPGRL+
Sbjct: 83 STMRPGRLE 91


>sp|RTCA_METTP|RNA 3'-terminal phosphate cyclase|Methanothrix thermoacetophila (strain

Query: 1 PAILRPGRLD 10
P+ LRP RL+
Sbjct: 170 PSRLRPARLE 179


>sp|SUA5_PYRAB|THREONYLCARBAMOYL-AMP synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 PAILRPGRL 9
P +LRPG L
Sbjct: 191 PVLLRPGGL 199


>sp|SUA5_SULTO|THREONYLCARBAMOYL-AMP synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PAILRPG 7
P +LRPG
Sbjct: 192 PVLLRPG 198




128|Sequence|636|645|PGRLDQLIYI

>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PGRLDQLIYI 10
PGR D+LIY+
Sbjct: 644 PGRFDRLIYV 653


>sp|SFSA_SULTO|SUGAR fermentation stimulation protein homolog|Sulfurisphaera tokodaii

Query: 1 PGRLDQLIY 9
PGRL +LIY
Sbjct: 36 PGRLKELIY 44


>sp|SFSA_SULAC|SUGAR fermentation stimulation protein homolog|Sulfolobus

Query: 1 PGRLDQLIY 9
PGRL +LIY
Sbjct: 42 PGRLKELIY 50


>sp|SFSA_PICTO|SUGAR fermentation stimulation protein homolog|Picrophilus torridus

Query: 1 PGRLDQLIY 9
PGRL+++IY
Sbjct: 49 PGRLNEIIY 57


>sp|SFSA_SACS2|SUGAR fermentation stimulation protein homolog|Saccharolobus

Query: 1 PGRLDQLIY 9
PGRL +LIY
Sbjct: 60 PGRLKELIY 68


>sp|SFSA_METBU|SUGAR fermentation stimulation protein homolog|Methanococcoides

Query: 1 PGRLDQLIY 9
PGRL+ L+Y
Sbjct: 49 PGRLEDLLY 57


>sp|SFSA_SACI4|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 1 PGRLDQLIY 9
PGRL LIY
Sbjct: 60 PGRLKDLIY 68


>sp|SFSA_SACI2|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 1 PGRLDQLIY 9
PGRL LIY
Sbjct: 60 PGRLKDLIY 68


>sp|SFSA_SACI6|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 1 PGRLDQLIY 9
PGRL LIY
Sbjct: 60 PGRLKDLIY 68


>sp|SFSA_SACI3|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 1 PGRLDQLIY 9
PGRL LIY
Sbjct: 60 PGRLKDLIY 68


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GRLDQLIYI 10
GR D+LIYI
Sbjct: 625 GRFDKLIYI 633


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PGRLDQLIYI 10
PGR D+L+++
Sbjct: 318 PGRFDRLVHV 327


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PGRLDQLIYI 10
PGRL++ IYI
Sbjct: 612 PGRLERHIYI 621


>sp|SFSA_THEVO|SUGAR fermentation stimulation protein homolog|Thermoplasma volcanium

Query: 1 PGRLDQLIY 9
PGRL ++IY
Sbjct: 36 PGRLKEIIY 44


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PGRLDQLIYI 10
PGR D+L+++
Sbjct: 318 PGRFDRLVHV 327


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 PGRLDQLIYI 10
PGRLD++I +
Sbjct: 609 PGRLDRVILV 618


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 1 PGRLDQLIYI 10
PGR D+LI +
Sbjct: 309 PGRFDRLIEV 318


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 PGRLDQLIYI 10
PGR D+LI +
Sbjct: 307 PGRFDRLIEV 316


>sp|SFSA_PYRNV|SUGAR fermentation stimulation protein homolog|Pyrobaculum neutrophilum

Query: 1 PGRLDQLIY 9
PGRL +L+Y
Sbjct: 42 PGRLAELLY 50


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 1 PGRLDQLIYI 10
PGR D+LI +
Sbjct: 311 PGRFDRLIEV 320


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 PGRLDQLIYI 10
PGR D+LI +
Sbjct: 311 PGRFDRLIEV 320


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PGRLDQLIYI 10
PGR D+LI +
Sbjct: 296 PGRFDRLIEV 305


>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 PGRLDQLIYI 10
PGR D+LI +
Sbjct: 296 PGRFDRLIEV 305


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PGRLDQLIYI 10
PGR D+LI +
Sbjct: 297 PGRFDRLIEV 306


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PGRLDQLIYI 10
PGR D+LI +
Sbjct: 293 PGRFDRLIEV 302


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PGRLDQLIYI 10
PGR D+LI +
Sbjct: 297 PGRFDRLIEV 306


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 1 PGRLDQLIYI 10
PGR D+LI +
Sbjct: 298 PGRFDRLIEV 307


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PGRLDQLIYI 10
PGR D+LI +
Sbjct: 299 PGRFDRLIEV 308


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PGRLDQLIYI 10
PGR D ++Y+
Sbjct: 241 PGRDDLVVYV 250


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PGRLDQLIYI 10
PGR D ++Y+
Sbjct: 241 PGRDDLVVYV 250


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 PGRLDQLIYI 10
PGR D ++Y+
Sbjct: 241 PGRDDLVVYV 250


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 GRLDQL 7
GRLDQL
Sbjct: 4752 GRLDQL 4757


>sp|SFSA_THEAC|SUGAR fermentation stimulation protein homolog|Thermoplasma acidophilum

Query: 1 PGRLDQLIY 9
PGRL +++Y
Sbjct: 36 PGRLLEIVY 44




129|Sequence|641|650|QLIYIPLPDE

>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 1 QLIYIPLPDE 10
++I IPLPDE
Sbjct: 342 RIIEIPLPDE 351


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 QLIYIPLPDE 10
+LIYIP PD+
Sbjct: 629 KLIYIPPPDK 638


>sp|XDH2_HALVD|D-XYLOSE 1-dehydrogenase (NADP(+)) 2|Haloferax volcanii (strain ATCC 29605

Query: 3 IYIPLPD 9
+YIPLP+
Sbjct: 66 VYIPLPN 72


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 QLIYIPLPDE 10
L Y+P PDE
Sbjct: 199 HLQYLPTPDE 208


>sp|IF1A_THEKO|TRANSLATION initiation factor 1A|Thermococcus kodakarensis (strain ATCC

Query: 1 QLIYIPLPD 9
++I +PLPD
Sbjct: 15 EVIRVPLPD 23


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 3 IYIPLPDE 10
I IPLPDE
Sbjct: 345 IKIPLPDE 352


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 QLIYIPLPDE 10
L Y+P PDE
Sbjct: 194 HLQYMPTPDE 203


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 1 QLIYIPLPDE 10
L Y+P PDE
Sbjct: 190 HLQYMPTPDE 199


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QLIYIPLPDE 10
+LIY+P PD+
Sbjct: 649 RLIYVPPPDK 658


>sp|TRUD_SACS2|PROBABLE tRNA pseudouridine synthase D|Saccharolobus solfataricus (strain

Query: 1 QLIYIPLPDE 10
QL+YIPL ++
Sbjct: 96 QLVYIPLNEK 105


>sp|RS10_THEAC|SMALL ribosomal subunit protein uS10|Thermoplasma acidophilum (strain

Query: 1 QLIYIPLPD 9
QL+ IP+PD
Sbjct: 86 QLMRIPIPD 94


>sp|HIS6_METHJ|IMIDAZOLE glycerol phosphate synthase subunit|Methanospirillum hungatei JF-1

Query: 5 IPLPDE 10
IPLPD+
Sbjct: 145 IPLPDQ 150


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 QLIYIPLPDE 10
++I +P+PDE
Sbjct: 614 RVILVPVPDE 623


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 QLIYIPLPD 9
++I IPLPD
Sbjct: 317 RMIEIPLPD 325


>sp|RS10_THEVO|SMALL ribosomal subunit protein uS10|Thermoplasma volcanium (strain

Query: 1 QLIYIPLPD 9
QL+ IP+PD
Sbjct: 86 QLMRIPIPD 94


>sp|RL13_METHJ|LARGE ribosomal subunit protein uL13|Methanospirillum hungatei JF-1

Query: 3 IYIPLPDE 10
IY+ +PDE
Sbjct: 97 IYVGVPDE 104


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 QLIYIPLPD 9
++I IPLPD
Sbjct: 317 RIIEIPLPD 325


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QLIYIPLPD 9
+LI +PLPD
Sbjct: 302 RLIEVPLPD 310


>sp|PCKG_THESM|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus sibiricus (strain DSM 12597

Query: 5 IPLPDE 10
IP+PDE
Sbjct: 353 IPIPDE 358


>sp|TRM1_AERPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Aeropyrum pernix (strain

Query: 2 LIYIPLPD 9
+IYIP P+
Sbjct: 18 IIYIPSPE 25


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 QLIYIPLPDE 10
QL+ +P PDE
Sbjct: 269 QLLGLPKPDE 278


>sp|FOLD_HALWD|BIFUNCTIONAL protein FolD|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LIYIPLPD 9
L+ +PLPD
Sbjct: 110 LVQMPLPD 117


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IYIPLPDE 10
IYIP PD+
Sbjct: 619 IYIPPPDK 626


>sp|TATC_CENSY|SEC-INDEPENDENT protein translocase protein TatC|Cenarchaeum symbiosum (strain A)

Query: 3 IYIPLPD 9
+Y P+PD
Sbjct: 46 VYYPVPD 52


>sp|SYP_THEVO|PROLINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 QLIYIPLPDE 10
Q++ +P+P E
Sbjct: 284 QVVIVPIPGE 293


>sp|RL13_AERPE|LARGE ribosomal subunit protein uL13|Aeropyrum pernix (strain ATCC 700893

Query: 3 IYIPLPDE 10
+Y+ +PDE
Sbjct: 109 VYVGVPDE 116


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 QLIYIPLPDE 10
+ I +PLP+E
Sbjct: 315 RFIEVPLPNE 324


>sp|LMRAC_THELN|LEUCINE/METHIONINE racemase|Thermococcus litoralis (strain ATCC 51850

Query: 4 YIPLPD 9
YIP PD
Sbjct: 166 YIPYPD 171


>sp|FOLD_NITMS|BIFUNCTIONAL protein FolD|Nitrosopumilus maritimus (strain SCM1)

Query: 2 LIYIPLPDE 10
L+ +PLP++
Sbjct: 95 LVQLPLPEQ 103


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 4 YIPLPDE 10
YIP P+E
Sbjct: 171 YIPRPEE 177


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 IYIPLPD 9
IYI LPD
Sbjct: 271 IYIRLPD 277


>sp|RL10_AERPE|LARGE ribosomal subunit protein uL10|Aeropyrum pernix (strain ATCC 700893

Query: 1 QLIYIPLPD 9
+++Y+P+P+
Sbjct: 236 EIVYMPVPE 244


>sp|PARP_SACSO|NAD(+) ADP-ribosyltransferase|Saccharolobus solfataricus (Sulfolobus

Query: 4 YIPLPD 9
++PLPD
Sbjct: 207 FVPLPD 212


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 2 LIYIPLPDE 10
L Y P PDE
Sbjct: 194 LQYSPTPDE 202




130|Sequence|646|655|PLPDEKSRVA

>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 PLPDEKSRV 9
P+PDEK+R+
Sbjct: 619 PVPDEKARL 627


>sp|GCK_PYRHO|GLYCERATE 2-kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PLPDEKS 7
P+PDEKS
Sbjct: 99 PIPDEKS 105


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 1 PLPDEKSRVA 10
PLPDE+ R++
Sbjct: 347 PLPDEEGRLS 356


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 PLPDEKSR 8
PLPDE+ R
Sbjct: 348 PLPDEEGR 355


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PLPDEKSRV 9
P PDEK R+
Sbjct: 339 PAPDEKGRL 347


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 1 PLPDEKSRV 9
PLP+ KSR+
Sbjct: 308 PLPNFKSRL 316


>sp|PYCA_METTH|PYRUVATE carboxylase subunit A|Methanothermobacter thermautotrophicus

Query: 3 PDEKSRVA 10
PDE +R+A
Sbjct: 141 PDEAARIA 148


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PLPDEKSRV 9
P PD+K+RV
Sbjct: 622 PPPDKKARV 630




131|Sequence|651|660|KSRVAILKAN

***** No hits found ******


132|Sequence|656|665|ILKANLRKSP

>sp|HPRT_METMS|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanohalophilus mahii (strain ATCC

Query: 1 ILKANLRKSP 10
ILK +L+K+P
Sbjct: 4 ILKKSLKKAP 13




133|Sequence|661|670|LRKSPVAKDV

>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LRKSPVAKDV 10
L+K P+ +D+
Sbjct: 227 LKKRPITRDI 236


>sp|RPO5_METTP|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanothrix thermoacetophila (strain

Query: 2 RKSPVAKD 9
RKSP AK+
Sbjct: 62 RKSPTAKE 69


>sp|CARA_PYRAE|CARBAMOYL phosphate synthase small chain|Pyrobaculum aerophilum (strain ATCC

Query: 1 LRKSPVAKDV 10
LRKSP +DV
Sbjct: 135 LRKSPHYEDV 144


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RKSPVAKDV 10
RK P+A+DV
Sbjct: 364 RKMPLAEDV 372


>sp|RPO5_METTH|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanothermobacter

Query: 1 LRKSPVAKD 9
+RKSP A++
Sbjct: 60 IRKSPTAEE 68




134|Sequence|666|675|VAKDVDLEFL

>sp|KAE1_NANEQ|TRNA N6-adenosine threonylcarbamoyltransferase|Nanoarchaeum equitans

Query: 1 VAKDVDLEF 9
VA+D+ LEF
Sbjct: 161 VARDLGLEF 169


>sp|PMDHL_METJA|PHOSPHOMEVALONATE dehydratase large subunit|Methanocaldococcus jannaschii (strain

Query: 3 KDVDLEFL 10
KD+ LEFL
Sbjct: 55 KDIGLEFL 62


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 VAKDVDLEFL 10
+A+DVDL++L
Sbjct: 365 LAEDVDLDYL 374


>sp|THSB_THEK1|CHAPERONIN subunit beta|Thermococcus sp. (strain JCM 11816

Query: 1 VAKDVDLE 8
+AKDVD+E
Sbjct: 142 IAKDVDVE 149


>sp|THSB_THEKO|CHAPERONIN subunit beta|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VAKDVDLE 8
+AKDVD+E
Sbjct: 142 IAKDVDVE 149


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VAKDVDLEFL 10
+A+DVDLE L
Sbjct: 368 LAEDVDLEEL 377


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 DVDLEFL 10
D+D+EFL
Sbjct: 383 DMDIEFL 389


>sp|PUR2_METJA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KDVDLEF 9
KD+D+EF
Sbjct: 328 KDIDVEF 334


>sp|RKD4_PYRCJ|ARCADIN-4 calidifontis (strain DSM 21063

Query: 1 VAKDVDLEF 9
VAKD++LE
Sbjct: 329 VAKDLELEL 337


>sp|GUAAB_PYRFU|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus furiosus

Query: 1 VAKDVDLEFL 10
VAKD+ E+L
Sbjct: 120 VAKDIGAEYL 129


>sp|Y534_METJA|UNCHARACTERIZED protein MJ0534|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VAKDVDLEFL 10
+ KD+DLE++
Sbjct: 207 ILKDLDLEYI 216


>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 VAKDVDLEFL 10
V +++DLEF+
Sbjct: 735 VDQNIDLEFM 744


>sp|PURL_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma volcanium (strain ATCC 51530

Query: 4 DVDLEFL 10
D+D+EFL
Sbjct: 383 DMDIEFL 389




135|Sequence|671|680|DLEFLAKMTN

>sp|HIS4_THEON|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Thermococcus onnurineus (strain

Query: 1 DLEFLAKMTN 10
DLEFL K+T+
Sbjct: 106 DLEFLEKITD 115


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DLEFLAKMTN 10
DLE LA++TN
Sbjct: 373 DLEELAELTN 382


>sp|LEU1_PYRAE|PROBABLE 2-isopropylmalate synthase|Pyrobaculum aerophilum (strain ATCC

Query: 1 DLEFLAK 7
DLEFLAK
Sbjct: 146 DLEFLAK 152


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DLEFLAKM 8
D EFLAKM
Sbjct: 498 DPEFLAKM 505


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DLEFLAKMT 9
DLE +AK+T
Sbjct: 333 DLEAIAKLT 341


>sp|GSA_PICTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Picrophilus torridus (strain ATCC 700027

Query: 2 LEFLAKMTN 10
LEFL ++TN
Sbjct: 216 LEFLREITN 224


>sp|METE_THEKO|METHIONINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DLEFLAKMTN 10
DL++L K+T+
Sbjct: 242 DLDYLKKLTH 251




136|Sequence|676|685|AKMTNGFSGA

>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 AKMTNGFSGA 10
AK+T GFSGA
Sbjct: 338 AKLTEGFSGA 347


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 AKMTNGFSGA 10
A MT GFSGA
Sbjct: 333 ASMTEGFSGA 342


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 AKMTNGFSGA 10
+++T GFSGA
Sbjct: 333 SQLTEGFSGA 342


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 AKMTNGFSGA 10
AK+T G SGA
Sbjct: 358 AKVTEGMSGA 367


>sp|CCA_METB6|CCA-ADDING enzyme|Methanoregula boonei (strain DSM 21154

Query: 2 KMTNGFSG 9
+MT GFSG
Sbjct: 172 QMTEGFSG 179


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 AKMTNGFSGA 10
A+MT G++GA
Sbjct: 408 AEMTYGYTGA 417


>sp|PAN_THEON|PROTEASOME-ACTIVATING nucleotidase|Thermococcus onnurineus (strain NA1)

Query: 1 AKMTNGFSGA 10
A+MT G SGA
Sbjct: 337 AEMTEGASGA 346


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AKMTNGFSGA 10
A+MT G SGA
Sbjct: 338 AEMTEGASGA 347


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 AKMTNGFSGA 10
AK T G++GA
Sbjct: 649 AKKTEGYTGA 658


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AKMTNGFSGA 10
AK T G SGA
Sbjct: 358 AKATEGMSGA 367


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 AKMTNGFSGA 10
AK+T G SGA
Sbjct: 378 AKITEGASGA 387


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 AKMTNGFS 8
AKM +GFS
Sbjct: 701 AKMVDGFS 708


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 AKMTNGFSGA 10
++++ GFSGA
Sbjct: 333 SQLSEGFSGA 342


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 AKMTNGFSGA 10
++++ GFSGA
Sbjct: 333 SQLSEGFSGA 342


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 AKMTNGFSGA 10
++++ GFSGA
Sbjct: 333 SQLSEGFSGA 342


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 AKMTNGFSGA 10
++++ GFSGA
Sbjct: 333 SQLSEGFSGA 342


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 AKMTNGFSGA 10
++++ GFSGA
Sbjct: 333 SQLSEGFSGA 342


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 AKMTNGFSGA 10
++++ GFSGA
Sbjct: 333 SQLSEGFSGA 342


>sp|BARAC_PYRHO|BROAD substrate specificity amino-acid racemase|Pyrococcus horikoshii

Query: 2 KMTNGFSGA 10
K+T GFSG+
Sbjct: 122 KVTYGFSGS 130


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 AKMTNGFSGA 10
A++T+G SGA
Sbjct: 350 ARITDGASGA 359


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AKMTNGFSGA 10
A+ T G+SGA
Sbjct: 652 AEKTEGYSGA 661


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 AKMTNGFSGA 10
AKMT G++ +
Sbjct: 303 AKMTEGYTAS 312


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AKMTNGFSGA 10
AKMT G GA
Sbjct: 369 AKMTEGCVGA 378


>sp|GATE_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C7 /

Query: 1 AKMTNGFSG 9
A + NGFSG
Sbjct: 307 AILLNGFSG 315


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AKMTNGFSGA 10
A++T G SGA
Sbjct: 340 ARITEGASGA 349


>sp|Y963_METJA|UNCHARACTERIZED protein MJ0963|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 MTNGFSGA 10
+ NG+SGA
Sbjct: 464 VNNGYSGA 471


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AKMTNGFSGA 10
A++T G SGA
Sbjct: 335 AELTEGASGA 344




137|Sequence|681|690|GFSGADLTEI

>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GFSGADLTEI 10
GFSGADL +
Sbjct: 343 GFSGADLKAV 352


>sp|PAN_SACS2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GFSGADLTEI 10
GFSGAD+ +
Sbjct: 338 GFSGADIKNV 347


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GFSGADLTEI 10
GFSGAD+ +
Sbjct: 338 GFSGADIKNV 347


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GFSGADLTEI 10
GFSGAD+ +
Sbjct: 338 GFSGADIKNV 347


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GFSGADLTEI 10
GFSGAD+ +
Sbjct: 338 GFSGADIKNV 347


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 GFSGADLTEI 10
GFSGAD+ +
Sbjct: 338 GFSGADIKNV 347


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GFSGADLTEI 10
GFSGAD+ +
Sbjct: 338 GFSGADIKNV 347


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GFSGADLTEI 10
GFSGAD+ +
Sbjct: 338 GFSGADIKNV 347


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GFSGADLTE 9
GFSG D+ E
Sbjct: 320 GFSGRDIKE 328


>sp|ARGJ_ARCFU|ARGININE biosynthesis bifunctional protein ArgJ|Archaeoglobus fulgidus

Query: 1 GFSGADLTE 9
G+SGAD+ E
Sbjct: 300 GYSGADVDE 308


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GFSGADLTEI 10
G+SGAD+ +
Sbjct: 657 GYSGADIEAV 666


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 GADLTEI 10
GADLTEI
Sbjct: 188 GADLTEI 194


>sp|Y785_METJA|UNCHARACTERIZED protein MJ0785|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SGADLTE 9
+GADLTE
Sbjct: 170 AGADLTE 176


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GFSGADLTEI 10
GFSGA++ +
Sbjct: 338 GFSGAEIKNV 347


>sp|PYRB_PYRAE|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum aerophilum

Query: 1 GFSGADLTEI 10
GFSGA+ T +
Sbjct: 72 GFSGAEGTSV 81


>sp|Y1150_METJA|UPF0215 protein MJ1150|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GFSGADLTEI 10
GF+ ADL EI
Sbjct: 81 GFNIADLWEI 90


>sp|PRIS_METPE|DNA primase small subunit PriS|Methanosphaerula palustris (strain

Query: 1 GFSGADL 7
G+SGADL
Sbjct: 89 GWSGADL 95


>sp|DNLI_METB6|DNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 GFSGADLTEI 10
GFS LTE+
Sbjct: 459 GFSDEQLTEV 468


>sp|NRPR_METMP|GLOBAL nitrogen regulator NrpR|Methanococcus maripaludis (strain DSM

Query: 1 GFSGADLTE 9
G+SG ++TE
Sbjct: 58 GYSGREITE 66


>sp|BARAC_PYRHO|BROAD substrate specificity amino-acid racemase|Pyrococcus horikoshii

Query: 1 GFSGAD 6
GFSG+D
Sbjct: 126 GFSGSD 131


>sp|CSG_HALGI|CELL surface glycoprotein|Haloferax gibbonsii

Query: 3 SGADLTE 9
+GADLTE
Sbjct: 530 TGADLTE 536


>sp|KDPB_HALSA|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 1 GFSGADLTEI 10
GF+G D+ E+
Sbjct: 257 GFAGLDVAEL 266


>sp|KDPB_HALS3|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 1 GFSGADLTEI 10
GF+G D+ E+
Sbjct: 257 GFAGLDVAEL 266




138|Sequence|686|695|DLTEICQRAC

>sp|LIPA_PYRAE|LIPOYL synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LTEICQRAC 10
L E+C RAC
Sbjct: 54 LGEVCTRAC 62


>sp|COFG_METS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LTEICQRAC 10
LTEIC+ C
Sbjct: 23 LTEICKNDC 31


>sp|LIPA_PYRAR|LIPOYL synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LTEICQRAC 10
L E+C RAC
Sbjct: 56 LGEVCTRAC 64


>sp|LIPA_PYRCJ|LIPOYL synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 LTEICQRAC 10
L ++C RAC
Sbjct: 55 LGDVCTRAC 63


>sp|COFG_METTP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LTEICQRAC 10
+T++C+ AC
Sbjct: 27 VTDLCRNAC 35


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 DLTEICQRAC 10
D E+C R C
Sbjct: 736 DRVEVCYRIC 745




139|Sequence|691|700|CQRACKLAIR

>sp|COFG_METB6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoregula boonei (strain DSM 21154

Query: 1 CQRACKLAIR 10
C+ C+LA+R
Sbjct: 89 CEAMCRLALR 98


>sp|THI4_METTH|THIAMINE thiazole synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 CQRACKLAIR 10
C RAC+ ++
Sbjct: 111 CSRACQAGLK 120


>sp|Y683_METJA|UNCHARACTERIZED protein MJ0683|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CQRACK 6
CQ ACK
Sbjct: 34 CQYACK 39


>sp|LIPA_PYRCJ|LIPOYL synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 CQRACKL 7
C RACK
Sbjct: 59 CTRACKF 65


>sp|Y694_METJA|UNCHARACTERIZED NOP5 family protein MJ0694|Methanocaldococcus jannaschii (strain

Query: 4 ACKLAI 9
ACKLAI
Sbjct: 327 ACKLAI 332


>sp|CAPPA_METKA|PHOSPHOENOLPYRUVATE carboxylase|Methanopyrus kandleri (strain AV19 /

Query: 4 ACKLAI 9
ACKLAI
Sbjct: 216 ACKLAI 221




140|Sequence|696|705|KLAIRESIES

>sp|KADL_METTH|ADENYLATE kinase homolog MTH_1663|Methanothermobacter thermautotrophicus

Query: 1 KLAIRESIES 10
K+ +RES+ES
Sbjct: 128 KMRVRESLES 137


>sp|AATD_METST|A-TYPE ATP synthase subunit D|Methanosphaera stadtmanae (strain ATCC

Query: 2 LAIRESIE 9
L++RESIE
Sbjct: 86 LSVRESIE 93


>sp|CDC63_SACS2|ORC1-TYPE DNA replication protein 3|Saccharolobus solfataricus (strain ATCC

Query: 1 KLAIRESIES 10
KLA+R IES
Sbjct: 297 KLALRSLIES 306


>sp|DNPH1_THEPD|PUTATIVE 2'-deoxynucleoside 5'-phosphate N-hydrolase 1|Thermofilum pendens

Query: 2 LAIRESIES 10
LA+RE +ES
Sbjct: 96 LALRERLES 104




141|Sequence|701|710|ESIESEIRRE

>sp|PUS10_AERPE|TRNA pseudouridine synthase Pus10|Aeropyrum pernix (strain ATCC 700893

Query: 1 ESIESEIRRE 10
ESI++EIRRE
Sbjct: 152 ESIKAEIRRE 161


>sp|PUS10_ACIS3|TRNA pseudouridine synthase Pus10|Acidilobus saccharovorans (strain DSM

Query: 1 ESIESEIRRE 10
ESI+SEI+RE
Sbjct: 149 ESIKSEIKRE 158


>sp|PFDB_AERPE|PREFOLDIN subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 1 ESIESEIRR 9
E IESE+RR
Sbjct: 102 ERIESELRR 110


>sp|PUS10_THEAM|TRNA pseudouridine synthase Pus10|Thermosphaera aggregans (strain DSM

Query: 1 ESIESEIRRE 10
ES+++EI+RE
Sbjct: 161 ESLKNEIKRE 170


>sp|RS15_SULTO|SMALL ribosomal subunit protein uS15|Sulfurisphaera tokodaii (strain DSM

Query: 1 ESIESEIRR 9
E IES+IRR
Sbjct: 114 EEIESKIRR 122


>sp|RS15_METS5|SMALL ribosomal subunit protein uS15|Metallosphaera sedula (strain ATCC

Query: 1 ESIESEIRR 9
E IES+IRR
Sbjct: 114 EEIESKIRR 122




142|Sequence|706|715|EIRRERERQT

>sp|PGMUT_SULTO|PHOSPHOGLUCOSAMINE/PHOSPHOGALACTOSAMINE mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EIRRERERQ 9
EIRRE+E +
Sbjct: 115 EIRREKENE 123




143|Sequence|711|720|RERQTNPSAM

>sp|RL5_METKA|LARGE ribosomal subunit protein uL5|Methanopyrus kandleri (strain AV19

Query: 1 RERQTNPS 8
R +QTNPS
Sbjct: 61 RAKQTNPS 68


>sp|MALE_THELN|TREHALOSE/MALTOSE-BINDING protein MalE|Thermococcus litoralis (strain ATCC 51850

Query: 2 ERQTNPS 8
ER+TNP+
Sbjct: 200 ERETNPN 206


>sp|RL5_METJA|LARGE ribosomal subunit protein uL5|Methanocaldococcus jannaschii

Query: 1 RERQTNPS 8
R +QTNPS
Sbjct: 52 RAKQTNPS 59




144|Sequence|716|725|NPSAMEVEED

>sp|TTRC_ARCFU|TETRATHIONATE reductase subunit C|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 MEVEED 10
MEVEED
Sbjct: 354 MEVEED 359


>sp|ARGC_METPE|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 NPSAMEVEED 10
NPS E+E D
Sbjct: 58 NPSVDEIEAD 67


>sp|RS4_KORCO|SMALL ribosomal subunit protein uS4|Korarchaeum cryptofilum (strain OPF8)

Query: 1 NPSAMEVEED 10
+PS +EVE++
Sbjct: 155 HPSCLEVEKE 164




145|Sequence|721|730|EVEEDDPVPE

>sp|SEPS_METBU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EVEEDDPVPE 10
EVE DD VPE
Sbjct: 141 EVEGDDLVPE 150


>sp|Y878_METJA|UNCHARACTERIZED lipoprotein MJ0878|Methanocaldococcus jannaschii (strain ATCC

Query: 4 EDDPVP 9
+DDPVP
Sbjct: 94 KDDPVP 99


>sp|LEUC_HALMA|3-ISOPROPYLMALATE dehydratase large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 5 DDPVPE 10
DDP+PE
Sbjct: 303 DDPIPE 308


>sp|CCA_PYRAB|CCA-ADDING enzyme|Pyrococcus abyssi (strain GE5 /

Query: 1 EVEEDDPV 8
E+EED P+
Sbjct: 229 EIEEDKPI 236




146|Sequence|726|735|DPVPEIRRDH

>sp|ADH_SULTO|NAD-DEPENDENT alcohol dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DPVPEIRR 8
DPV EIRR
Sbjct: 227 DPVSEIRR 234


>sp|Y804_METJA|UNCHARACTERIZED protein MJ0804|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VPEIRRDH 10
VP+I+R+H
Sbjct: 274 VPDIKREH 281


>sp|PRIS_HALMA|DNA primase small subunit PriS|Haloarcula marismortui (strain ATCC

Query: 1 DPVPEIRRDH 10
DPVPE R H
Sbjct: 336 DPVPETFRGH 345


>sp|ADH_SULSR|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus sp. (strain RC3)

Query: 1 DPVPEIRR 8
DP+ EIRR
Sbjct: 227 DPLAEIRR 234


>sp|ADH_SACS2|NAD-DEPENDENT alcohol dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DPVPEIRR 8
DP+ EIRR
Sbjct: 227 DPLAEIRR 234


>sp|COBS_THEVO|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 VPEIRRDH 10
+PE+ +DH
Sbjct: 91 IPEVIKDH 98


>sp|KPRS_SULAC|RIBOSE-PHOSPHATE pyrophosphokinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DPVPEIRR 8
DP+P+I R
Sbjct: 143 DPIPDIAR 150


>sp|GLNA_METJA|GLUTAMINE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DPVPEIRRD 9
D P+IRRD
Sbjct: 173 DDAPDIRRD 181


>sp|GATE_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina barkeri (strain Fusaro /

Query: 3 VPEIRRD 9
VPEIRR+
Sbjct: 508 VPEIRRN 514


>sp|GATE_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina acetivorans (strain ATCC

Query: 3 VPEIRRD 9
VPEIRR+
Sbjct: 508 VPEIRRN 514


>sp|ILVD_METS5|DIHYDROXY-ACID dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 3 VPEIRRDH 10
+PE + DH
Sbjct: 358 IPEFKHDH 365


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 2 PVPEIRR 8
P+PE+RR
Sbjct: 609 PLPEVRR 615


>sp|GATE_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina mazei (strain ATCC

Query: 3 VPEIRRD 9
VPEIRR+
Sbjct: 508 VPEIRRN 514


>sp|AATA_METKA|A-TYPE ATP synthase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 2 PVPEIRRD 9
P+PEIR++
Sbjct: 93 PLPEIRKE 100


>sp|XERA_SACS2|TYROSINE recombinase XerA|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PVPEIRR 8
P+P++RR
Sbjct: 108 PIPKVRR 114


>sp|RRP42_METAR|EXOSOME complex component Rrp42|Methanocella arvoryzae (strain DSM 22066

Query: 1 DPVPEIRRDH 10
D + EI+RD+
Sbjct: 4 DVIAEIKRDY 13


>sp|Y189_METAR|UPF0313 protein UNCMA_01890|Methanocella arvoryzae (strain DSM 22066

Query: 1 DPVPEIRRDH 10
+P P + +DH
Sbjct: 374 EPCPNLNKDH 383


>sp|RBLL_ARCFU|RIBULOSE bisphosphate carboxylase-like protein|Archaeoglobus fulgidus

Query: 4 PEIRRDH 10
PE+RR H
Sbjct: 70 PEVRRKH 76


>sp|NIFB_METIM|FEMO cofactor biosynthesis protein NifB|Methanocaldococcus infernus

Query: 3 VPEIRRDH 10
+PEI DH
Sbjct: 199 IPEINMDH 206


>sp|Y1008_ARCFU|UNCHARACTERIZED protein AF_1008|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 EIRRDH 10
+IRRDH
Sbjct: 55 QIRRDH 60




147|Sequence|731|740|IRRDHFEEAM

>sp|Y1509_METJA|UNCHARACTERIZED protein MJ1509|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IRRDHFEEA 9
IR++H EEA
Sbjct: 137 IRKEHIEEA 145


>sp|SAHH_PYRAB|ADENOSYLHOMOCYSTEINASE abyssi (strain GE5 /

Query: 1 IRRDHFE 7
IRR+HFE
Sbjct: 280 IRREHFE 286


>sp|SAHH_PYRFU|ADENOSYLHOMOCYSTEINASE furiosus (strain ATCC 43587

Query: 1 IRRDHFE 7
IRR+HFE
Sbjct: 279 IRREHFE 285


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IRRDHFEEAM 10
I + HFEEA+
Sbjct: 697 ITKKHFEEAL 706


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 1 IRRDHFEE 8
IRRDH +E
Sbjct: 149 IRRDHIDE 156


>sp|SAHH_PYRHO|ADENOSYLHOMOCYSTEINASE horikoshii (strain ATCC 700860

Query: 1 IRRDHFE 7
IRR+HFE
Sbjct: 279 IRREHFE 285


>sp|CPGS_PYRFU|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus furiosus (strain ATCC

Query: 4 DHFEEAM 10
DHFE+A+
Sbjct: 189 DHFEDAL 195


>sp|CPGS_THESM|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus sibiricus (strain

Query: 4 DHFEEAM 10
DHFE+A+
Sbjct: 190 DHFEDAL 196


>sp|CPGS_THEON|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus onnurineus (strain

Query: 4 DHFEEAM 10
DHFE+A+
Sbjct: 190 DHFEDAL 196


>sp|CPGS_THEKO|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus kodakarensis (strain

Query: 4 DHFEEAM 10
DHFE+A+
Sbjct: 190 DHFEDAL 196


>sp|CPGS_THEGJ|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus gammatolerans

Query: 4 DHFEEAM 10
DHFE+A+
Sbjct: 191 DHFEDAL 197


>sp|CPGS_PYRHO|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus horikoshii (strain

Query: 4 DHFEEAM 10
DHFE+A+
Sbjct: 193 DHFEDAL 199


>sp|CPGS_PYRAB|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus abyssi (strain GE5 /

Query: 4 DHFEEAM 10
DHFE+A+
Sbjct: 189 DHFEDAL 195


>sp|MFNA_THEGJ|PROBABLE L-aspartate decarboxylase|Thermococcus gammatolerans (strain DSM

Query: 1 IRRDHFEE 8
+RR+H EE
Sbjct: 365 VRREHLEE 372


>sp|SAHH_THEKO|ADENOSYLHOMOCYSTEINASE kodakarensis (strain ATCC BAA-918

Query: 1 IRRDHFE 7
IR++HFE
Sbjct: 279 IRKEHFE 285


>sp|Y1136_SULTO|PUTATIVE ABC transporter ATP-binding protein|Sulfurisphaera tokodaii (strain

Query: 1 IRRDHFEE 8
I+RDH +E
Sbjct: 223 IKRDHVKE 230


>sp|AMPD_METJA|ANHYDROMEVALONATE phosphate decarboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 RDHFEEA 9
R+HFE A
Sbjct: 410 REHFERA 416


>sp|DNAG_ARCFU|DNA primase DnaG|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IRRDHFEE 8
I R+HFEE
Sbjct: 136 ILREHFEE 143


>sp|HERA_PYRFU|DNA double-strand break repair helicase|Pyrococcus furiosus (strain

Query: 2 RRDHFEEAM 10
+RD +EE M
Sbjct: 376 KRDEYEEIM 384


>sp|GATB_HALWD|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IRRDHFEE 8
IRR H EE
Sbjct: 127 IRRAHLEE 134


>sp|CDC63_SULTO|ORC1-TYPE DNA replication protein 3|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IRRDHFEEAM 10
IR+DH + A+
Sbjct: 267 IRKDHVDRAI 276


>sp|GATB_HALMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloarcula marismortui (strain ATCC

Query: 1 IRRDHFEE 8
IRR H EE
Sbjct: 127 IRRAHLEE 134


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IRRDHFEE 8
+R+D FEE
Sbjct: 529 LRKDKFEE 536




148|Sequence|736|745|FEEAMRFARR

>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 FEEAMRFARR 10
FE AMR+A++
Sbjct: 496 FENAMRWAKK 505


>sp|FEN_METJA|FLAP endonuclease 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FEEAMRFARR 10
FEEA ++A+R
Sbjct: 114 FEEAAKYAKR 123


>sp|Y871_METJA|UNCHARACTERIZED protein MJ0871|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FEEAMRFARR 10
F+ +RFA+R
Sbjct: 177 FKSTIRFAKR 186


>sp|R15PI_ARCFU|RIBOSE 1,5-bisphosphate isomerase|Archaeoglobus fulgidus (strain ATCC

Query: 1 FEEAMRFA 8
F+E MRFA
Sbjct: 42 FDEEMRFA 49


>sp|RIBB_METTH|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 2 EEAMRFAR 9
E+AM++AR
Sbjct: 201 EDAMKYAR 208


>sp|ARCSA_METAC|ARCHAEOSINE synthase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 3 EAMRFARR 10
E +RFARR
Sbjct: 314 EVVRFARR 321


>sp|GCS2_HALVD|GLUTAMATE--CYSTEINE ligase|Haloferax volcanii (strain ATCC 29605

Query: 1 FEEAMRFARR 10
FEE RF RR
Sbjct: 202 FEEFQRFERR 211


>sp|GATE_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanothermobacter thermautotrophicus

Query: 1 FEEAMR 6
FEEAMR
Sbjct: 60 FEEAMR 65




149|Sequence|741|750|RFARRSVSDN

>sp|IF2B_METAC|TRANSLATION initiation factor 2 subunit|Methanosarcina acetivorans (strain

Query: 1 RFARRSVSDN 10
RF R +SDN
Sbjct: 82 RFTRAQISDN 91


>sp|CS12F_UNCAX|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f1|Uncultured archaeon

Query: 2 FARRSVSDN 10
F+R S+SDN
Sbjct: 341 FSRYSISDN 349


>sp|IF2B_METMA|TRANSLATION initiation factor 2 subunit|Methanosarcina mazei (strain ATCC

Query: 1 RFARRSVSDN 10
RF R +SDN
Sbjct: 82 RFTRAQLSDN 91




150|Sequence|746|755|SVSDNDIRKY

>sp|PURO_METVS|IMP cyclohydrolase|Methanococcus vannielii (strain ATCC 35089

Query: 2 VSDNDIR 8
VSDNDIR
Sbjct: 127 VSDNDIR 133


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 VSDNDIRK 9
VSD+DI+K
Sbjct: 111 VSDDDIKK 118


>sp|DCDB_METST|DCTP deaminase, dUMP-forming|Methanosphaera stadtmanae (strain ATCC

Query: 2 VSDNDIRKY 10
+SD DI+KY
Sbjct: 4 LSDKDIKKY 12


>sp|TFE_CALMQ|TRANSCRIPTION factor E|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 SVSDNDIRKY 10
S+ D DIR++
Sbjct: 90 SIKDEDIRRF 99


>sp|PURO_META3|IMP cyclohydrolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 VSDNDIR 8
V+DNDIR
Sbjct: 128 VADNDIR 134


>sp|Y1453_METJA|UNCHARACTERIZED protein MJ1453|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 NDIRKY 10
NDIRKY
Sbjct: 161 NDIRKY 166


>sp|CMR7B_SACS2|PUTATIVE CRISPR system CMR subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 VSDNDIRKY 10
VS+N +RK+
Sbjct: 59 VSNNQVRKF 67


>sp|MTAD_PYRAB|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus abyssi (strain GE5 /

Query: 2 VSDNDIRK 9
+SD DIRK
Sbjct: 252 LSDEDIRK 259


>sp|DCDB_METTH|DCTP deaminase, dUMP-forming|Methanothermobacter thermautotrophicus

Query: 2 VSDNDIRKY 10
+SD DI++Y
Sbjct: 4 LSDRDIKRY 12


>sp|Y4021_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 SVSDNDIRKY 10
++ DN+ R Y
Sbjct: 76 TIKDNEFRSY 85


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 SVSDNDIRK 9
S+SD +IRK
Sbjct: 639 SLSDEEIRK 647


>sp|FILR2_METH6|PROBABLE methanogenesis regulatory protein FilR2|Methanothrix harundinacea

Query: 1 SVSDNDIRK 9
S SD+D+R+
Sbjct: 107 STSDDDLRR 115


>sp|RFRNP_METMP|RNA-FREE ribonuclease P|Methanococcus maripaludis (strain DSM 14266

Query: 1 SVSDNDIRK 9
+++D+D+RK
Sbjct: 12 AITDSDVRK 20


>sp|IDI2_PICTO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Picrophilus torridus (strain ATCC 700027

Query: 1 SVSDNDIR 8
S+SDNDI
Sbjct: 133 SLSDNDIE 140


>sp|CS12F_UNCAX|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f1|Uncultured archaeon

Query: 1 SVSDNDI 7
S+SDND+
Sbjct: 345 SISDNDL 351


>sp|RFRNP_METM6|RNA-FREE ribonuclease P|Methanococcus maripaludis (strain C6 /

Query: 1 SVSDNDIRK 9
+++D+D+RK
Sbjct: 12 AITDSDVRK 20


>sp|RFRNP_METM5|RNA-FREE ribonuclease P|Methanococcus maripaludis (strain C5 /

Query: 1 SVSDNDIRK 9
+++D+D+RK
Sbjct: 12 AITDSDVRK 20


>sp|PURO_METM7|IMP cyclohydrolase|Methanococcus maripaludis (strain C7 /

Query: 2 VSDNDIR 8
VS+ND+R
Sbjct: 127 VSENDVR 133




151|Sequence|751|760|DIRKYEMFAQ

>sp|HEMH_THEAC|FERROCHELATASE acidophilum (strain ATCC 25905

Query: 1 DIRKYEMFA 9
++RKYEMF
Sbjct: 40 NLRKYEMFG 48


>sp|Y258_PYRAB|UPF0273 protein PYRAB02580|Pyrococcus abyssi (strain GE5 /

Query: 1 DIRKYE---MFA 9
D+RKYE MFA
Sbjct: 76 DVRKYEEEGMFA 87


>sp|METXA_METMS|HOMOSERINE O-acetyltransferase|Methanohalophilus mahii (strain ATCC 35705

Query: 1 DIRKYEMF 8
DIR+ EMF
Sbjct: 241 DIRENEMF 248


>sp|BIOB_METM6|BIOTIN synthase|Methanococcus maripaludis (strain C6 /

Query: 1 DIRKYEMFA 9
D++KY +FA
Sbjct: 288 DMQKYSLFA 296


>sp|Y1861_SACS2|UPF0273 protein SSO1861|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DIRKYE 6
D+RKYE
Sbjct: 75 DVRKYE 80


>sp|Y600_METMP|PROBABLE minor pilin MMP0600|Methanococcus maripaludis (strain DSM 14266

Query: 1 DIRKYEMFA 9
DI+K+E+ A
Sbjct: 153 DIKKFEIIA 161


>sp|HEMH_THEVO|FERROCHELATASE volcanium (strain ATCC 51530

Query: 3 RKYEMFA 9
RKYEMF
Sbjct: 42 RKYEMFG 48


>sp|Y1590_THEKO|UPF0273 protein TK1590|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DIRKYE 6
D+RKYE
Sbjct: 76 DVRKYE 81


>sp|Y1931_PYRFU|UPF0273 protein PF1931|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DIRKYE 6
D+RKYE
Sbjct: 76 DVRKYE 81


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DIRKYEMFAQ 10
DI++YE F++
Sbjct: 764 DIQRYERFSK 773


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 DIRKYEMFAQ 10
D+R YE AQ
Sbjct: 875 DMRVYEKLAQ 884




152|Sequence|756|765|EMFAQTLQQS

>sp|GCSPB_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 EMFAQTLQQ 9
+MFA+TL++
Sbjct: 446 DMFAETLKK 454


>sp|SRP54_HALSA|SIGNAL recognition particle 54 kDa|Halobacterium salinarum (strain ATCC

Query: 1 EMFAQTLQQ 9
+M AQT+QQ
Sbjct: 421 KMMAQTMQQ 429


>sp|SRP54_HALS3|SIGNAL recognition particle 54 kDa|Halobacterium salinarum (strain ATCC

Query: 1 EMFAQTLQQ 9
+M AQT+QQ
Sbjct: 421 KMMAQTMQQ 429




153|Sequence|761|770|TLQQSRGFGS

***** No hits found ******


154|Sequence|766|775|RGFGSFRFPS

>sp|RFCL_METTP|REPLICATION factor C large subunit|Methanothrix thermoacetophila (strain DSM

Query: 1 RGFGSFRFPS 10
RG+ FR PS
Sbjct: 321 RGYTQFRPPS 330


>sp|DNLJ_HALWD|DNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 RGFGSFRFPS 10
R G+F FP+
Sbjct: 468 RATGTFNFPN 477


>sp|RL30_THEVO|LARGE ribosomal subunit protein uL30|Thermoplasma volcanium (strain

Query: 2 GFGSFR 7
GFGS+R
Sbjct: 88 GFGSYR 93


>sp|GLPK_PYRAB|GLYCEROL kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 RGFGSFRFP 9
+G G + FP
Sbjct: 27 KGIGQYEFP 35


>sp|RL22_PYRFU|LARGE ribosomal subunit protein uL22|Pyrococcus furiosus (strain ATCC

Query: 1 RGFGSFRFP 9
+GFG R+P
Sbjct: 76 KGFGPGRYP 84


>sp|TRPB_PICTO|TRYPTOPHAN synthase beta chain|Picrophilus torridus (strain ATCC 700027

Query: 3 FGSFRFP 9
FG F FP
Sbjct: 269 FGGFAFP 275


>sp|RL22_PYRHO|LARGE ribosomal subunit protein uL22|Pyrococcus horikoshii (strain ATCC

Query: 1 RGFGSFRFP 9
+GFG R+P
Sbjct: 76 KGFGPGRYP 84


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GFGSFR 7
GFG+FR
Sbjct: 330 GFGTFR 335


>sp|RL22_PYRAB|LARGE ribosomal subunit protein uL22|Pyrococcus abyssi (strain GE5 /

Query: 1 RGFGSFRFP 9
+GFG R+P
Sbjct: 76 KGFGPGRYP 84




155|Sequence|771|780|FRFPSGNQGG

>sp|CCA_THEKO|CCA-ADDING enzyme|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FRFPSGNQGG 10
F FP+G GG
Sbjct: 276 FFFPTGKTGG 285


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 3 FPSGNQGG 10
FP+G++GG
Sbjct: 591 FPTGSEGG 598


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 3 FPSGNQGG 10
FP GN GG
Sbjct: 638 FPIGNAGG 645


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 3 FPSGNQGG 10
FP GN GG
Sbjct: 611 FPIGNAGG 618


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 RFPSGNQGG 10
RFP G Q G
Sbjct: 571 RFPGGFQSG 579


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 2 RFPSGNQGG 10
RFP G Q G
Sbjct: 571 RFPGGFQSG 579


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 3 FPSGNQGG 10
FP G++GG
Sbjct: 590 FPIGDEGG 597


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 FPSGNQGG 10
FP G +GG
Sbjct: 676 FPVGEEGG 683


>sp|SYT_METPE|THREONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 FRFPSGNQ 8
+RF SGN+
Sbjct: 270 YRFKSGNR 277


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FRFPSGNQ 8
+RF SGN+
Sbjct: 271 YRFKSGNR 278


>sp|SYT_METHJ|THREONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 FRFPSGNQ 8
+RF SGN+
Sbjct: 270 YRFKSGNR 277


>sp|ARGDC_CALMQ|ARGININE decarboxylase proenzyme|Caldivirga maquilingensis (strain ATCC

Query: 1 FRFPSGNQGG 10
+RF G++GG
Sbjct: 63 WRFGGGDKGG 72


>sp|Y378_NANEQ|UPF0173 metal-dependent hydrolase NEQ378|Nanoarchaeum equitans (strain

Query: 3 FPSGNQGG 10
+P GN GG
Sbjct: 108 YPLGNPGG 115


>sp|GATA_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcoides burtonii (strain DSM

Query: 2 RFPSGNQGG 10
R P G+ GG
Sbjct: 139 RVPGGSSGG 147


>sp|GATA_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 2 RFPSGNQGG 10
R P G+ GG
Sbjct: 140 RVPGGSSGG 148


>sp|GATA_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 2 RFPSGNQGG 10
R P G+ GG
Sbjct: 139 RVPGGSSGG 147


>sp|GATA_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 2 RFPSGNQGG 10
R P G+ GG
Sbjct: 140 RVPGGSSGG 148


>sp|DNAJ_METTH|CHAPERONE protein DnaJ|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 FRFPSGNQGG 10
R P+G Q G
Sbjct: 299 LRIPAGTQSG 308




156|Sequence|776|785|GNQGGAGPSQ

>sp|METXA_METFP|HOMOSERINE O-acetyltransferase|Methanobacterium formicicum (strain DSM 3637

Query: 1 GNQGGAGPS 9
G QG GPS
Sbjct: 99 GCQGSTGPS 107


>sp|HCP_METJA|HYDROXYLAMINE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GNQGGAGPSQ 10
GN GG+ P Q
Sbjct: 277 GNYGGSWPFQ 286


>sp|LYSY_SACS2|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 NQGGAGPSQ 10
++GGA PS+
Sbjct: 185 SEGGAKPSE 193


>sp|LYSY_SULAC|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 NQGGAGPSQ 10
++GGA PS+
Sbjct: 182 SEGGAKPSE 190




157|Sequence|781|790|AGPSQGSGGG

>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 AGPSQGSGG 9
AGP +G+GG
Sbjct: 147 AGPIRGAGG 155


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 AGPSQGSGG 9
AGP +G+GG
Sbjct: 144 AGPIRGAGG 152


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 AGPSQGSGG 9
AGP +G+GG
Sbjct: 142 AGPIRGAGG 150


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 AGPSQGSGG 9
AGP + SGG
Sbjct: 147 AGPIRSSGG 155


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 AGPSQGSGG 9
AGP + SGG
Sbjct: 144 AGPIRSSGG 152


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AGPSQGSGG 9
AGP + SGG
Sbjct: 144 AGPIRSSGG 152


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 AGPSQGSGG 9
AGP + SGG
Sbjct: 144 AGPIRSSGG 152


>sp|ATGT_PICTO|TRNA-GUANINE(15) transglycosylase|Picrophilus torridus (strain ATCC 700027

Query: 1 AGPSQGS 7
AGP QGS
Sbjct: 155 AGPVQGS 161


>sp|ATGT_METBF|TRNA-GUANINE(15) transglycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 AGPSQGS 7
AGP QGS
Sbjct: 162 AGPVQGS 168


>sp|ATGT_METMA|TRNA-GUANINE(15) transglycosylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AGPSQGS 7
AGP QGS
Sbjct: 162 AGPVQGS 168


>sp|ATGT_METAC|TRNA-GUANINE(15) transglycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 AGPSQGS 7
AGP QGS
Sbjct: 162 AGPVQGS 168


>sp|TRM1_HALLT|TRNA (guanine(26)-N(2))-dimethyltransferase|Halorubrum lacusprofundi

Query: 2 GPSQGSGGG 10
G S+G+GGG
Sbjct: 18 GASEGTGGG 26


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 SQGSGGG 10
++GSGGG
Sbjct: 869 AKGSGGG 875


>sp|SRP19_AERPE|SIGNAL recognition particle 19 kDa|Aeropyrum pernix (strain ATCC 700893

Query: 2 GPSQGSG 8
GPS GSG
Sbjct: 9 GPSGGSG 15




158|Sequence|786|795|GSGGGTGGSV

>sp|FPRA_METJA|COENZYME F420H(2) oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GSGGGTGGSV 10
GS GG GG+V
Sbjct: 358 GSMGGEGGAV 367


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 2 SGGGTGGSV 10
S GGTGGS+
Sbjct: 173 SLGGTGGSI 181


>sp|SPEE_PYRFU|POLYAMINE aminopropyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GGGTGGSV 10
GGG GG+V
Sbjct: 83 GGGDGGTV 90


>sp|SPEE_METJA|POLYAMINE aminopropyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 GGGTGGSV 10
GGG GG+V
Sbjct: 91 GGGDGGTV 98


>sp|NDRZ_THEAC|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Thermoplasma

Query: 2 SGGGTGGS 9
SGGGTG S
Sbjct: 275 SGGGTGFS 282


>sp|Y873_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 3 GGGTGGSV 10
GGGTG +V
Sbjct: 266 GGGTGANV 273


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 4 GGTGGSV 10
GGTGG V
Sbjct: 173 GGTGGGV 179


>sp|SPEE_PYRAB|POLYAMINE aminopropyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 GGGTGGSV 10
GGG GG++
Sbjct: 81 GGGDGGTI 88


>sp|Y1038_PYRHO|PROBABLE ABC transporter permease protein|Pyrococcus horikoshii (strain ATCC

Query: 1 GSGGGTGGS 9
+GGG GG+
Sbjct: 239 ATGGGPGGA 247


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 4 GGTGGSV 10
GGTGG V
Sbjct: 173 GGTGGGV 179


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 4 GGTGGSV 10
GGTGG +
Sbjct: 175 GGTGGGI 181


>sp|SPEE_THEON|POLYAMINE aminopropyltransferase|Thermococcus onnurineus (strain NA1)

Query: 3 GGGTGGSV 10
GGG GG++
Sbjct: 88 GGGDGGTL 95


>sp|SPEE_THEKO|POLYAMINE aminopropyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 3 GGGTGGSV 10
GGG GG++
Sbjct: 88 GGGDGGTL 95


>sp|RNZ_PICTO|RIBONUCLEASE Z|Picrophilus torridus (strain ATCC 700027

Query: 5 GTGGSV 10
GTGGSV
Sbjct: 11 GTGGSV 16


>sp|SPEE_KORCO|POLYAMINE aminopropyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 GGGTGGSV 10
GGG GG++
Sbjct: 105 GGGDGGAL 112


>sp|SPEE_ARCFU|POLYAMINE aminopropyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GGGTGGSV 10
GGG GG++
Sbjct: 80 GGGDGGAL 87


>sp|CARB1_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 4 GGTGGSV 10
GGTGG +
Sbjct: 172 GGTGGGI 178


>sp|FPRA_METTM|COENZYME F420H(2) oxidase|Methanothermobacter marburgensis (strain ATCC

Query: 1 GSGGGTGGS 9
GS GG GG+
Sbjct: 350 GSMGGNGGA 358


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 4 GGTGGSV 10
GG GGSV
Sbjct: 649 GGLGGSV 655


>sp|FPRA_METAZ|COENZYME F420H(2) oxidase|Methanobrevibacter arboriphilus

Query: 1 GSGGGTGGS 9
GS GG GG+
Sbjct: 355 GSMGGKGGT 363


>sp|HTPX_PYRHO|PROTEASE HtpX homolog|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GGTGGSV 10
GGTGG +
Sbjct: 28 GGTGGMI 34


>sp|FPRA_METTH|COENZYME F420H(2) oxidase|Methanothermobacter thermautotrophicus (strain

Query: 1 GSGGGTGGS 9
GS GG GG+
Sbjct: 350 GSMGGRGGA 358


>sp|CARB1_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 4 GGTGGSV 10
GGTGG +
Sbjct: 173 GGTGGGI 179


>sp|HTPX1_METMA|PROTEASE HtpX homolog 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GGTGGSV 10
GGTGG +
Sbjct: 26 GGTGGMI 32


>sp|COFC_HALWD|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GSGGGTGGSV 10
G GGGT V
Sbjct: 217 GRGGGTNAIV 226


>sp|COFC_HALUD|2-PHOSPHO-L-LACTATE guanylyltransferase|Halorhabdus utahensis (strain DSM 12940

Query: 1 GSGGGTGGSV 10
G GGGT V
Sbjct: 113 GRGGGTNAFV 122


>sp|COFC_HALSA|2-PHOSPHO-L-LACTATE guanylyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GSGGGT 6
GSGGGT
Sbjct: 116 GSGGGT 121


>sp|COFC_HALS3|2-PHOSPHO-L-LACTATE guanylyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GSGGGT 6
GSGGGT
Sbjct: 116 GSGGGT 121


>sp|THIOL_METJA|ACETYL-COA acetyltransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GGTGGSV 10
GGTGG+V
Sbjct: 377 GGTGGTV 383




159|Sequence|791|800|TGGSVYTEDN

>sp|THIC_SULTO|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TGGSVYTEDN 10
+GG+ +TED+
Sbjct: 134 SGGAYFTEDD 143


>sp|TOP6B_PYRAE|TYPE 2 DNA topoisomerase 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 SVYTEDN 10
SVY EDN
Sbjct: 68 SVYAEDN 74


>sp|THIC1_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TGGSVYTED 9
+GG+ +TED
Sbjct: 134 SGGAYFTED 142


>sp|MBHJ_PYRFU|PROBABLE membrane-bound hydrogenase subunit mbhJ|Pyrococcus furiosus (strain

Query: 1 TGGSVYTE 8
TGGSV+ E
Sbjct: 104 TGGSVFYE 111


>sp|THIC_SACI4|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 TGGSVYTED 9
+GG+ +TED
Sbjct: 134 SGGAYFTED 142


>sp|THIC_SACI6|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 TGGSVYTED 9
+GG+ +TED
Sbjct: 134 SGGAYFTED 142


>sp|THIC_SACI3|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 TGGSVYTED 9
+GG+ +TED
Sbjct: 134 SGGAYFTED 142


>sp|THIC_SACI2|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 TGGSVYTED 9
+GG+ +TED
Sbjct: 134 SGGAYFTED 142


>sp|THIC2_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TGGSVYTED 9
+GG+ +TED
Sbjct: 134 SGGAYFTED 142


>sp|PORA_METTH|PYRUVATE synthase subunit PorA|Methanothermobacter thermautotrophicus

Query: 2 GGSVYTE 8
GG++YTE
Sbjct: 326 GGALYTE 332


>sp|RFCL_METM7|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 TGGSVYTED 9
TGGS+ ED
Sbjct: 207 TGGSIEVED 215


>sp|TRM56_METB6|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanoregula boonei

Query: 2 GGSVYTEDN 10
GG + EDN
Sbjct: 58 GGQFFCEDN 66


>sp|GALE_METJA|PUTATIVE UDP-glucose 4-epimerase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 TGGSVYTEDN 10
+GG+VY E N
Sbjct: 115 SGGAVYGEPN 124


>sp|Y958_METJA|UNCHARACTERIZED protein MJ0958|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GGSVYTEDN 10
GG ++ EDN
Sbjct: 233 GGKIHFEDN 241


>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 TGGSVYTED 9
TGGS+ ED
Sbjct: 207 TGGSLEVED 215


>sp|RFCL_METM6|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 TGGSVYTED 9
TGGS+ ED
Sbjct: 207 TGGSLEVED 215


>sp|AROA_KORCO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 TGGSVYTED 9
TGG V ED
Sbjct: 247 TGGKVIVED 255


>sp|RIBB_METTH|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 TGGSVYTED 9
TG S+ TED
Sbjct: 194 TGNSLSTED 202


>sp|TRPD_CENSY|ANTHRANILATE phosphoribosyltransferase|Cenarchaeum symbiosum (strain A)

Query: 2 GGSVYTE 8
GG VYTE
Sbjct: 237 GGEVYTE 243




160|Sequence|796|806|YTEDNDDDLYG

>sp|PMDHS_METJA|PHOSPHOMEVALONATE dehydratase small subunit|Methanocaldococcus jannaschii (strain

Query: 4 DNDDDLYG 11
D D DLYG
Sbjct: 38 DKDSDLYG 45


>sp|SRP54_METTH|SIGNAL recognition particle 54 kDa|Methanothermobacter thermautotrophicus

Query: 1 YTEDNDDDLYG 11
YTE D +YG
Sbjct: 149 YTEGQDVSIYG 159


>sp|FEN_THEGJ|FLAP endonuclease 1|Thermococcus gammatolerans (strain DSM 15229

Query: 1 YTEDNDDDLYG 11
Y +D+D DLY
Sbjct: 264 YQKDSDVDLYA 274


>sp|ENGB_META3|PROBABLE GTP-binding protein EngB|Methanococcus aeolicus (strain ATCC

Query: 1 YTEDNDDDLYG 11
Y EDN D + G
Sbjct: 105 YIEDNKDQIVG 115


>sp|PANB_HALMA|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 YTEDNDDDLY 10
+TED DDLY
Sbjct: 260 HTEDELDDLY 269


>sp|SYN_THEAC|ASPARAGINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 TEDNDDDL 9
TEDN+D+L
Sbjct: 250 TEDNEDEL 257


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 YTEDNDDDLYG 11
YT D + LYG
Sbjct: 658 YTRDEAESLYG 668


>sp|Y912_METMA|UPF0288 protein MM_0912|Methanosarcina mazei (strain ATCC BAA-159

Query: 6 DDDLYG 11
DDDL+G
Sbjct: 475 DDDLFG 480


>sp|SYS2_METTH|TYPE-2 serine--tRNA ligase|Methanothermobacter thermautotrophicus (strain

Query: 1 YTEDNDDDLY 10
YTE DD Y
Sbjct: 396 YTEVGDDPFY 405


>sp|Y3997_METAC|UPF0288 protein MA_3997|Methanosarcina acetivorans (strain ATCC 35395

Query: 6 DDDLYG 11
DDDL+G
Sbjct: 475 DDDLFG 480


>sp|MRE11_METTH|DNA double-strand break repair protein|Methanothermobacter

Query: 2 TEDNDDDL 9
+ED DDD+
Sbjct: 153 SEDTDDDM 160


>sp|RL15E_HALWD|LARGE ribosomal subunit protein eL15|Haloquadratum walsbyi (strain DSM

Query: 4 DNDDDL 9
+NDDDL
Sbjct: 143 ENDDDL 148


>sp|LYSX_SACS2|ALPHA-AMINOADIPATE--LYSW ligase LysX|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YTEDNDDDLY 10
+T DND DL+
Sbjct: 35 FTIDNDTDLF 44


>sp|HTPX_METKA|PROTEASE HtpX homolog|Methanopyrus kandleri (strain AV19 /

Query: 5 NDDDLYG 11
+DD++YG
Sbjct: 157 DDDEIYG 163


>sp|AATF_METB6|A-TYPE ATP synthase subunit F|Methanoregula boonei (strain DSM 21154

Query: 1 YTEDNDDDL 9
YT +ND+ L
Sbjct: 24 YTAENDEKL 32


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YTEDNDDDL 9
Y +NDDD+
Sbjct: 309 YLPNNDDDV 317


>sp|DNLI_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 TEDNDDDL 9
T++NDDDL
Sbjct: 36 TDENDDDL 43


>sp|RS6E_HALWD|SMALL ribosomal subunit protein eS6|Haloquadratum walsbyi (strain DSM

Query: 3 EDNDDDL 9
EDNDDD+
Sbjct: 151 EDNDDDI 157


>sp|Y1999_ARCFU|UNCHARACTERIZED protein AF_1999|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DNDDDL 9
DN+DDL
Sbjct: 120 DNEDDL 125






THE END