TAU_HUMAN Blast Output
Archaea
1|Sequence|1|10|MAEPRQEFEV

>sp|Y307_ARCFU|UNCHARACTERIZED protein AF_0307|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MAEPRQEFEV 10
+A PRQEF V
Sbjct: 128 LAIPRQEFNV 137


>sp|MCRA_METBF|METHYL-COENZYME M reductase subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 2 AEPRQEF 8
AEPR+EF
Sbjct: 543 AEPRREF 549


>sp|MCRA_METAC|METHYL-COENZYME M reductase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 2 AEPRQEF 8
AEPR+EF
Sbjct: 543 AEPRREF 549


>sp|Y971_METJA|UNCHARACTERIZED protein MJ0971|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EPRQEFEV 10
EP++E+E+
Sbjct: 242 EPKKEYEI 249


>sp|Y1764_CENSY|DNA-BINDING protein CENSYa_1764|Cenarchaeum symbiosum (strain A)

Query: 1 MAEPRQEFEV 10
M +PR+EF++
Sbjct: 83 MQKPRREFKI 92


>sp|OTCC_THEAC|ORNITHINE carbamoyltransferase, catabolic|Thermoplasma acidophilum (strain

Query: 3 EPRQEF 8
EP+QEF
Sbjct: 184 EPKQEF 189


>sp|HEM3_PYRAE|PROBABLE porphobilinogen deaminase|Pyrobaculum aerophilum (strain ATCC

Query: 3 EPRQEFEV 10
EPR +FE+
Sbjct: 28 EPRVDFEI 35


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 1 MAEPRQEF 8
+ EPR+EF
Sbjct: 346 LPEPREEF 353


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 MAEPRQEFEV 10
MAE QEF +
Sbjct: 450 MAETLQEFSI 459




2|Sequence|6|15|QEFEVMEDHA

>sp|KHSE_PICTO|HOMOSERINE kinase|Picrophilus torridus (strain ATCC 700027

Query: 2 EFEVMEDHA 10
E EV+EDH+
Sbjct: 29 EVEVLEDHS 37


>sp|FER2_HALMA|FERREDOXIN-2 marismortui (strain ATCC 43049

Query: 3 FEVMEDHA 10
FEV+EDH
Sbjct: 7 FEVLEDHG 14


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 2 EFEVMEDHA 10
EFEVM D A
Sbjct: 215 EFEVMRDAA 223


>sp|METXA_METMS|HOMOSERINE O-acetyltransferase|Methanohalophilus mahii (strain ATCC 35705

Query: 5 VMEDHA 10
VMEDHA
Sbjct: 447 VMEDHA 452


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 2 EFEVMEDHA 10
EFEVM D A
Sbjct: 215 EFEVMRDAA 223


>sp|COBQ_METPE|PROBABLE cobyric acid synthase|Methanosphaerula palustris (strain ATCC

Query: 2 EFEVMEDHA 10
+FE++E HA
Sbjct: 262 DFELLERHA 270


>sp|COBQ_METMJ|PROBABLE cobyric acid synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 EFEVMEDH 9
+FE++E+H
Sbjct: 264 DFELLEEH 271


>sp|CYAS_METLZ|CYSTEATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 EVMEDH 9
EV+EDH
Sbjct: 13 EVLEDH 18


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 2 EFEVMED 8
EFEVM D
Sbjct: 215 EFEVMRD 221


>sp|PYRI_NATPD|ASPARTATE carbamoyltransferase regulatory chain|Natronomonas pharaonis

Query: 1 QEFEVMEDH 9
++FEV+E H
Sbjct: 87 RDFEVIEKH 95


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 2 EFEVMED 8
EFEVM D
Sbjct: 215 EFEVMRD 221


>sp|SAHH_HALWD|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16790

Query: 1 QEFEVMEDHA 10
++FEVM D A
Sbjct: 291 EDFEVMSDGA 300


>sp|SAHH_HALWC|ADENOSYLHOMOCYSTEINASE walsbyi (strain DSM 16854

Query: 1 QEFEVMEDHA 10
++FEVM D A
Sbjct: 291 EDFEVMSDGA 300


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 2 EFEVMED 8
EFEVM D
Sbjct: 215 EFEVMRD 221




3|Sequence|11|20|MEDHAGTYGL

>sp|RL24_METHJ|LARGE ribosomal subunit protein uL24|Methanospirillum hungatei JF-1

Query: 3 DHAGTYGL 10
DHAGT GL
Sbjct: 59 DHAGTEGL 66


>sp|RL15_META3|LARGE ribosomal subunit protein uL15|Methanococcus aeolicus (strain

Query: 1 MEDHAGTYGL 10
M DH G YG
Sbjct: 51 MPDHIGKYGF 60


>sp|RL24_METBU|LARGE ribosomal subunit protein uL24|Methanococcoides burtonii (strain

Query: 3 DHAGTYG 9
DHAGT G
Sbjct: 55 DHAGTKG 61


>sp|NTPPA_PYRAB|DTTP/UTP pyrophosphatase|Pyrococcus abyssi (strain GE5 /

Query: 2 EDHAGTYGL 10
+D AG+YG+
Sbjct: 139 KDKAGSYGI 147


>sp|LYSJ_SACS2|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Saccharolobus

Query: 3 DHAGTYG 9
DH TYG
Sbjct: 262 DHGSTYG 268


>sp|PCNA_NITMS|DNA polymerase sliding clamp|Nitrosopumilus maritimus (strain SCM1)

Query: 2 EDHAGTYGL 10
ED GTY L
Sbjct: 191 EDSVGTYSL 199


>sp|LYSJ_SULAC|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfolobus

Query: 3 DHAGTYG 9
DH TYG
Sbjct: 261 DHGSTYG 267


>sp|LYSJ_SULTO|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfurisphaera

Query: 3 DHAGTYG 9
DH TYG
Sbjct: 261 DHGSTYG 267


>sp|ADEC_STAMF|ADENINE deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 1 MEDHAGTYG 9
+EDH G G
Sbjct: 337 LEDHVGVVG 345


>sp|ASSY_HALSA|ARGININOSUCCINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 MEDHAGTYGL 10
+ D AG+YG+
Sbjct: 238 LNDRAGSYGV 247


>sp|Y1445_THESM|UPF0248 protein TSIB_1445|Thermococcus sibiricus (strain DSM 12597

Query: 3 DHAGTYG 9
+H GTYG
Sbjct: 29 EHRGTYG 35


>sp|HTPX_PYRAE|PROTEASE HtpX homolog|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 HAGTYGL 10
H G YGL
Sbjct: 70 HMGAYGL 76


>sp|Y3021_SACS2|UNCHARACTERIZED protein SSO3021|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 MEDHAGTYGL 10
+EDH G G+
Sbjct: 344 VEDHLGIIGI 353


>sp|Y1526_METAR|PUTATIVE HTH-type transcriptional regulatory protein|Methanocella arvoryzae

Query: 1 MEDHAGTYGL 10
+ D AGTY L
Sbjct: 267 LADVAGTYSL 276


>sp|Y787_METJA|UNCHARACTERIZED protein MJ0787|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DHAGTYG 9
DH G YG
Sbjct: 134 DHFGMYG 140


>sp|GLYA_NITMS|SERINE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 EDHAGTYGL 10
++H+GT GL
Sbjct: 130 KEHSGTAGL 138




4|Sequence|16|25|GTYGLGDRKD

>sp|DNLI_METS3|DNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GTYGLGDRKD 10
GTYG+G R D
Sbjct: 435 GTYGIGKRGD 444


>sp|MTIP_METJA|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanocaldococcus jannaschii

Query: 3 YGLGDRK 9
YG G+RK
Sbjct: 233 YGFGERK 239


>sp|FEN_METST|FLAP endonuclease 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GTYGLGDRK 9
G YG+G +K
Sbjct: 231 GVYGIGAKK 239


>sp|ARCR_HALS3|PROBABLE HTH-type transcriptional regulator ArcR|Halobacterium salinarum

Query: 1 GTYGLGD 7
GTY LGD
Sbjct: 68 GTYQLGD 74


>sp|MTAD2_ARCFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YGLGDRKD 10
YG+ DR D
Sbjct: 138 YGMADRGD 145


>sp|PELO_METBF|PROTEIN pelota homolog|Methanosarcina barkeri (strain Fusaro /

Query: 1 GTYGLGDRKD 10
YGLGD K+
Sbjct: 271 AAYGLGDVKN 280


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YGLGDRK 9
YGL D+K
Sbjct: 726 YGLSDKK 732


>sp|MRE11_AERPE|DNA double-strand break repair protein|Aeropyrum pernix (strain ATCC

Query: 3 YGLGDRKD 10
YGL +R+D
Sbjct: 17 YGLEERRD 24


>sp|SYR_METJA|ARGININE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YGLGDRK 9
YG GD+K
Sbjct: 107 YGRGDKK 113




5|Sequence|21|30|GDRKDQGGYT

>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 2 DRKDQGGY 9
D KD GGY
Sbjct: 142 DPKDPGGY 149


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 2 DRKDQGGY 9
D KD GGY
Sbjct: 144 DPKDPGGY 151


>sp|TRPB2_THEKO|TRYPTOPHAN synthase beta chain 2|Thermococcus kodakarensis (strain ATCC

Query: 2 DRKDQGGYT 10
D D GGYT
Sbjct: 305 DYGDSGGYT 313


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 2 DRKDQGGY 9
D KD GGY
Sbjct: 144 DPKDPGGY 151


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 KDQGGYT 10
+D GGYT
Sbjct: 534 RDHGGYT 540


>sp|CBID_METMJ|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 RKDQGGYT 10
RKD G YT
Sbjct: 94 RKDAGDYT 101


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 2 DRKDQGGY 9
D KD GGY
Sbjct: 150 DPKDPGGY 157


>sp|Y4618_METAC|UPF0313 protein MA_4618|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 KDQGGYT 10
+D GGYT
Sbjct: 652 RDHGGYT 658


>sp|GLNA1_METMA|GLUTAMINE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 DQGGY 9
DQGGY
Sbjct: 155 DQGGY 159


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 4 KDQGGY 9
KD+GGY
Sbjct: 109 KDRGGY 114


>sp|TRPB_THEGJ|TRYPTOPHAN synthase beta chain|Thermococcus gammatolerans (strain DSM 15229

Query: 2 DRKDQGGYT 10
D D GGYT
Sbjct: 305 DFGDSGGYT 313


>sp|AROB_SULTO|3-DEHYDROQUINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DRKDQGGY 9
D+K +GGY
Sbjct: 314 DKKVRGGY 321




6|Sequence|26|35|QGGYTMHQDQ

>sp|CHEB_METMP|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Methanococcus

Query: 1 QGGYTMHQDQ 10
+GGYT+ Q+Q
Sbjct: 316 KGGYTIAQNQ 325


>sp|SFSA_CALMQ|SUGAR fermentation stimulation protein homolog|Caldivirga maquilingensis

Query: 1 QGGYTM 6
+GGYTM
Sbjct: 123 KGGYTM 128


>sp|Y967_METTH|PUTATIVE HTH-type transcriptional regulatory protein|Methanothermobacter

Query: 1 QGGYTMHQD 9
+GGY +H D
Sbjct: 122 RGGYYVHID 130


>sp|GRPE_METTP|PROTEIN GrpE|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 QGGYTMH 7
Q GYT+H
Sbjct: 157 QKGYTLH 163




7|Sequence|31|40|MHQDQEGDTD

>sp|CMO_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase cofactor-modifying|Pyrococcus

Query: 3 QDQEGDTD 10
+D+EGD D
Sbjct: 25 EDEEGDMD 32


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 MHQDQEGDTD 10
M +DQEG+ +
Sbjct: 219 MKEDQEGEVE 228


>sp|PGK_METS5|PHOSPHOGLYCERATE kinase|Metallosphaera sedula (strain ATCC 51363

Query: 2 HQDQEGDTD 10
HQ + GD D
Sbjct: 61 HQGRPGDND 69


>sp|RIBB_ARCFU|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QDQEGDTD 10
+D+EG+TD
Sbjct: 24 EDREGETD 31




8|Sequence|36|45|EGDTDAGLKE

>sp|SYP_PYRCJ|PROLINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GDTDAGLK 9
GD D GLK
Sbjct: 436 GDNDCGLK 443


>sp|RL18A_PYRCJ|LARGE ribosomal subunit protein eL20|Pyrobaculum calidifontis (strain

Query: 2 GDTDAGLK 9
GDT G+K
Sbjct: 9 GDTSTGMK 16


>sp|THSA_HALSA|THERMOSOME subunit alpha|Halobacterium salinarum (strain ATCC 700922

Query: 2 GDTDAGL 8
GDT+AGL
Sbjct: 470 GDTEAGL 476


>sp|THIO_ARCFU|PROBABLE Thioredoxin|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DTDAGLKE 10
+TD GLKE
Sbjct: 39 NTDEGLKE 46




9|Sequence|41|50|AGLKESPLQT

>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GLKESPLQ 9
GLKE PL+
Sbjct: 216 GLKEIPLK 223


>sp|GCH1_SULTO|GTP cyclohydrolase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GLKESPLQ 9
GL+E+PL+
Sbjct: 33 GLRETPLR 40


>sp|IDI2_PYRAE|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 KESPLQ 9
KESPLQ
Sbjct: 232 KESPLQ 237




10|Sequence|46|55|SPLQTPTEDG

>sp|Y1221_METJA|UNCHARACTERIZED protein MJ1221|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PLQTPTEDG 10
PL+T EDG
Sbjct: 39 PLKTSIEDG 47


>sp|END4_HALMA|PROBABLE endonuclease 4|Haloarcula marismortui (strain ATCC 43049

Query: 3 LQTPTEDG 10
L+TPTE+G
Sbjct: 254 LETPTENG 261


>sp|END4_NATPD|PROBABLE endonuclease 4|Natronomonas pharaonis (strain ATCC 35678

Query: 3 LQTPTEDG 10
L+TPTE+G
Sbjct: 254 LETPTENG 261


>sp|END4_NITMS|PROBABLE endonuclease 4|Nitrosopumilus maritimus (strain SCM1)

Query: 3 LQTPTEDG 10
L TP EDG
Sbjct: 75 LATPKEDG 82


>sp|CCA_THEGJ|CCA-ADDING enzyme|Thermococcus gammatolerans (strain DSM 15229

Query: 2 PLQTPTED 9
PL+TP E+
Sbjct: 73 PLETPLEE 80


>sp|END4_HALSA|PROBABLE endonuclease 4|Halobacterium salinarum (strain ATCC 700922

Query: 3 LQTPTEDG 10
L+TP EDG
Sbjct: 253 LETPHEDG 260


>sp|END4_HALS3|PROBABLE endonuclease 4|Halobacterium salinarum (strain ATCC 29341

Query: 3 LQTPTEDG 10
L+TP EDG
Sbjct: 253 LETPHEDG 260


>sp|SECY_METTH|PROTEIN translocase subunit SecY|Methanothermobacter thermautotrophicus

Query: 1 SPLQTPTEDG 10
+PL PT+ G
Sbjct: 192 NPLSAPTQPG 201


>sp|YD5A_METJA|UNCHARACTERIZED protein MJ1351.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 QTPTEDG 10
+ PTEDG
Sbjct: 86 EIPTEDG 92


>sp|IMDH_THEAC|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SPLQTPTEDG 10
SP+ T TED
Sbjct: 51 SPMDTVTEDA 60


>sp|RPO3_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus horikoshii (strain ATCC

Query: 2 PLQTPTE 8
PL+TPT+
Sbjct: 67 PLKTPTD 73


>sp|UPP_METM7|URACIL phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 2 PLQTPTE 8
P+QTP E
Sbjct: 61 PIQTPLE 67




11|Sequence|51|60|PTEDGSEEPG

>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 PTEDGSEEPG 10
P EDG EEPG
Sbjct: 493 PIEDGPEEPG 502


>sp|RPO10_HALWD|DNA-DIRECTED RNA polymerase subunit Rpo10|Haloquadratum walsbyi (strain DSM

Query: 4 DGSEEPG 10
DG+E+PG
Sbjct: 27 DGNEDPG 33


>sp|SYP_METTP|PROLINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 EDGSEEPG 10
+DG E PG
Sbjct: 328 DDGDERPG 335


>sp|RPO10_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo10|Halobacterium salinarum (strain ATCC

Query: 2 TEDGSEEPG 10
T DG E+P
Sbjct: 27 THDGDEDPA 35


>sp|RPO10_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo10|Halobacterium salinarum (strain ATCC

Query: 2 TEDGSEEPG 10
T DG E+P
Sbjct: 27 THDGDEDPA 35




12|Sequence|56|65|SEEPGSETSD

***** No hits found ******


13|Sequence|61|70|SETSDAKSTP

***** No hits found ******


14|Sequence|66|75|AKSTPTAEDV

>sp|AMZA_METJA|ARCHAEMETZINCIN jannaschii (strain ATCC 43067

Query: 2 KSTPTAEDV 10
KS PT ED+
Sbjct: 61 KSLPTVEDI 69


>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 KSTPTAEDV 10
KSTP AE++
Sbjct: 17 KSTPVAEEI 25


>sp|QUEE_HALS3|7-CARBOXY-7-DEAZAGUANINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 AKSTPTAE 8
A STPTAE
Sbjct: 138 ASSTPTAE 145


>sp|SYT_METAR|THREONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 KSTPTAEDV 10
KSTP AE +
Sbjct: 17 KSTPVAEKI 25


>sp|CS3HD_THETK|CRISPR-ASSOCIATED endonuclease Cas3-HD|Thermoproteus tenax (strain ATCC 35583

Query: 1 AKSTPTAEDV 10
A PTA+DV
Sbjct: 155 ASRPPTADDV 164


>sp|UDGB_PYRAE|TYPE-5 uracil-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 KSTPTAEDV 10
K+ PTAE+V
Sbjct: 129 KNRPTAEEV 137




15|Sequence|71|80|TAEDVTAPLV

>sp|GCSH_THEVO|PROBABLE glycine cleavage system H|Thermoplasma volcanium (strain ATCC

Query: 1 TAEDVTAPL 9
+AEDV +PL
Sbjct: 65 SAEDVYSPL 73


>sp|Y666_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0666|Methanocaldococcus

Query: 1 TAEDVTAPL 9
+AED+ AP+
Sbjct: 44 SAEDIKAPI 52


>sp|PURP_PYRAE|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum aerophilum (strain ATCC

Query: 1 TAEDVTAPLV 10
TAE+V P++
Sbjct: 142 TAEEVEGPVI 151


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 TAEDVTAPLV 10
T ED+ PLV
Sbjct: 362 TGEDLETPLV 371


>sp|RNZ_METM5|RIBONUCLEASE Z|Methanococcus maripaludis (strain C5 /

Query: 1 TAEDVTAP 8
T EDVT P
Sbjct: 190 TPEDVTLP 197




16|Sequence|76|85|TAPLVDEGAP

>sp|RS4_METPE|SMALL ribosomal subunit protein uS4|Methanosphaerula palustris (strain

Query: 1 TAPLVDEGAP 10
T+PL EG P
Sbjct: 162 TSPLTSEGHP 171


>sp|GLMS_METMA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina mazei (strain ATCC

Query: 4 LVDEGAP 10
L+DEGAP
Sbjct: 519 LLDEGAP 525


>sp|AATD_METB6|A-TYPE ATP synthase subunit D|Methanoregula boonei (strain DSM 21154

Query: 1 TAPLVDEGA 9
T+P++DE A
Sbjct: 125 TSPVIDETA 133


>sp|MFNC_METJA|(5-FORMYLFURAN-3-YL)METHYL phosphate transaminase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 PLVDEG 8
P+VDEG
Sbjct: 46 PIVDEG 51


>sp|IF2G_META3|TRANSLATION initiation factor 2 subunit|Methanococcus aeolicus (strain ATCC

Query: 3 PLVDEGAP 10
P +DEGAP
Sbjct: 202 PEMDEGAP 209


>sp|ARGC_METKA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanopyrus kandleri (strain AV19 /

Query: 2 APLVDEG 8
APLV+EG
Sbjct: 162 APLVEEG 168




17|Sequence|81|90|DEGAPGKQAA

***** No hits found ******


18|Sequence|86|95|GKQAAAQPHT

>sp|SYW_SULTO|TRYPTOPHAN--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GKQAAAQPHT 10
GK +++QP T
Sbjct: 253 GKMSSSQPET 262


>sp|SYW_SULAC|TRYPTOPHAN--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GKQAAAQPHT 10
GK +++QP T
Sbjct: 253 GKMSSSQPET 262


>sp|SYW_PYRHO|TRYPTOPHAN--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GKQAAAQPHT 10
GK +A++P T
Sbjct: 252 GKMSASKPET 261


>sp|SYW_PYRAB|TRYPTOPHAN--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 GKQAAAQPHT 10
GK +A++P T
Sbjct: 252 GKMSASKPET 261


>sp|SYW_PYRFU|TRYPTOPHAN--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GKQAAAQPHT 10
GK +A++P T
Sbjct: 252 GKMSASKPET 261


>sp|SYW_THESM|TRYPTOPHAN--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 GKQAAAQPHT 10
GK +A++P T
Sbjct: 251 GKMSASKPET 260


>sp|SYW_THEON|TRYPTOPHAN--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 GKQAAAQPHT 10
GK +A++P T
Sbjct: 251 GKMSASKPET 260


>sp|SYW_THEKO|TRYPTOPHAN--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GKQAAAQPHT 10
GK +A++P T
Sbjct: 251 GKMSASKPET 260




19|Sequence|91|100|AQPHTEIPEG

>sp|Y4442_HALS3|UPF0200 protein OE_4442F|Halobacterium salinarum (strain ATCC 29341

Query: 3 PHTEIPE 9
PHTE+P+
Sbjct: 181 PHTEVPD 187


>sp|Y2452_HALSA|UPF0200 protein VNG_2452C|Halobacterium salinarum (strain ATCC 700922

Query: 3 PHTEIPE 9
PHTE+P+
Sbjct: 181 PHTEVPD 187


>sp|PTH_META3|PEPTIDYL-TRNA hydrolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 HTEIPEG 10
HT+IP G
Sbjct: 85 HTQIPSG 91


>sp|Y1631_METJA|UNCHARACTERIZED protein MJ1631|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 HTEIPEG 10
HT +PEG
Sbjct: 194 HTPLPEG 200


>sp|Y1269_PYRHO|UPF0098 protein PH1269|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PHTEIPEG 10
P TEIPEG
Sbjct: 109 PVTEIPEG 116


>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 AQPHTEIPE 9
A P T IPE
Sbjct: 230 ASPTTSIPE 238


>sp|PTH_METTH|PEPTIDYL-TRNA hydrolase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 HTEIPEG 10
HT+IP G
Sbjct: 81 HTQIPAG 87


>sp|TRM56_CENSY|TRNA (cytidine(56)-2'-O)-methyltransferase|Cenarchaeum symbiosum (strain

Query: 1 AQPHTEI 7
QPH+EI
Sbjct: 127 GQPHSEI 133


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 2 QPHTEIP 8
+PH EIP
Sbjct: 39 KPHVEIP 45


>sp|TRM56_METMJ|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanoculleus marisnigri

Query: 2 QPHTEI 7
QPH+EI
Sbjct: 130 QPHSEI 135


>sp|TRM56_NITMS|TRNA (cytidine(56)-2'-O)-methyltransferase|Nitrosopumilus maritimus

Query: 1 AQPHTEI 7
+QPH+EI
Sbjct: 128 SQPHSEI 134


>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 3 PHTEIPEG 10
PH +P+G
Sbjct: 515 PHMAVPDG 522


>sp|CSG_HALMA|CELL surface glycoprotein|Haloarcula marismortui (strain ATCC 43049

Query: 2 QPHTEIPE 9
QP TE PE
Sbjct: 802 QPDTETPE 809


>sp|TRM56_METBF|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosarcina barkeri

Query: 1 AQPHTEI 7
+QPH+E+
Sbjct: 129 SQPHSEV 135


>sp|DNAG_THEKO|DNA primase DnaG|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 AQPHTEIPE 9
AQP E PE
Sbjct: 336 AQPKAETPE 344


>sp|SYK_HALSA|LYSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 PHTEIPE 9
P+TEIP+
Sbjct: 116 PYTEIPD 122


>sp|TRM56_METB6|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanoregula boonei (strain

Query: 1 AQPHTEI 7
QPH+EI
Sbjct: 131 GQPHSEI 137


>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AQPHTEIPEG 10
A H E PEG
Sbjct: 414 AYEHVESPEG 423


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AQPHTEIPEG 10
A H E PEG
Sbjct: 414 AYEHVERPEG 423


>sp|TRM56_METMA|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosarcina mazei (strain

Query: 1 AQPHTEI 7
+QPH+E+
Sbjct: 129 SQPHSEV 135




20|Sequence|96|105|EIPEGTTAEE

>sp|QUEC_METB6|7-CYANO-7-DEAZAGUANINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 EIPEGTTAEE 10
++PEG AEE
Sbjct: 78 DVPEGHYAEE 87


>sp|RL2_NANEQ|LARGE ribosomal subunit protein uL2|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 EIPEGT 6
EIPEGT
Sbjct: 99 EIPEGT 104


>sp|Y1569_METJA|PUTATIVE metal transport protein MJ1569|Methanocaldococcus jannaschii

Query: 2 IPEGTTA 8
+P+GTTA
Sbjct: 59 VPDGTTA 65


>sp|ENDA_HALVD|TRNA-SPLICING endonuclease|Haloferax volcanii (strain ATCC 29605

Query: 3 PEGTTAEE 10
PEGT AE+
Sbjct: 159 PEGTAAED 166


>sp|Y2215_HALMD|PUTATIVE lipoprotein Hmuk_2215|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 EIPEGTT 7
E+PEGTT
Sbjct: 150 EVPEGTT 156


>sp|SYK_ARCFU|LYSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EIPEGTTAE 9
EIPE TAE
Sbjct: 405 EIPEKVTAE 413


>sp|HYPA_THESM|HYDROGENASE maturation factor HypA|Thermococcus sibiricus (strain DSM 12597

Query: 1 EIPEGTTAEE 10
EI +GT AEE
Sbjct: 50 EIKKGTIAEE 59


>sp|RL6_AERPE|LARGE ribosomal subunit protein uL6|Aeropyrum pernix (strain ATCC

Query: 1 EIPEGTT 7
E+PEG T
Sbjct: 12 EVPEGVT 18


>sp|ACDB_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit beta|Archaeoglobus

Query: 1 EIPEGTTAEE 10
EIPEG +E
Sbjct: 8 EIPEGVKVKE 17


>sp|RL2_METST|LARGE ribosomal subunit protein uL2|Methanosphaera stadtmanae (strain

Query: 1 EIPEGT 6
EIPEGT
Sbjct: 102 EIPEGT 107


>sp|RL2_METS3|LARGE ribosomal subunit protein uL2|Methanobrevibacter smithii (strain

Query: 1 EIPEGT 6
EIPEGT
Sbjct: 102 EIPEGT 107


>sp|RL2_PYRAR|LARGE ribosomal subunit protein uL2|Pyrobaculum arsenaticum (strain DSM

Query: 1 EIPEGT 6
EIPEGT
Sbjct: 98 EIPEGT 103




21|Sequence|101|110|TTAEEAGIGD

>sp|URE1_NATPD|UREASE subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 2 TAEEAGIGD 10
TA EAG+GD
Sbjct: 498 TAHEAGVGD 506


>sp|G1PDH_KORCO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Korarchaeum cryptofilum (strain OPF8)

Query: 1 TTAEEAGI 8
TTAEEAGI
Sbjct: 264 TTAEEAGI 271


>sp|SERB_ARCFU|PHOSPHOSERINE phosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 AEEAGIGD 10
A+EAG+GD
Sbjct: 150 AKEAGVGD 157


>sp|GPMI_NATPD|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 TAEEAGIGD 10
T EEAG GD
Sbjct: 166 TVEEAGTGD 174


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 TAEEAGIGD 10
+A+EAGI D
Sbjct: 310 SAQEAGISD 318


>sp|T2MZ_METTF|TYPE II restriction enzyme MthZI|Methanothermobacter thermautotrophicus

Query: 1 TTAEEAGI 8
T AEEAG+
Sbjct: 130 TIAEEAGL 137


>sp|KAE1B_METMP|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 TAEEAGIG 9
TAE++G+G
Sbjct: 16 TAEKSGVG 23




22|Sequence|106|115|AGIGDTPSLE

>sp|PGP_METTP|PHOSPHOGLYCOLATE phosphatase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 AGIGDTPS 8
A IGD+PS
Sbjct: 165 AAIGDSPS 172


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 3 IGDTPSL 9
IGD PSL
Sbjct: 565 IGDVPSL 571


>sp|CBID_METKA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 GIGDTPS 8
G+G+TPS
Sbjct: 138 GVGETPS 144


>sp|AGL13_HALVD|PROBABLE low-salt glycan biosynthesis epimerase|Haloferax volcanii (strain

Query: 2 GIGDTPSL 9
IGD PSL
Sbjct: 113 AIGDEPSL 120


>sp|PSA_PYRFU|PROTEASOME subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AGIGDTPSL 9
AGI D P L
Sbjct: 141 AGINDRPEL 149


>sp|G1PDH_THEKO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus kodakarensis (strain ATCC

Query: 1 AGIGDTPS 8
AG+GDT S
Sbjct: 168 AGVGDTIS 175


>sp|G1PDH_SACS2|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus solfataricus (strain ATCC

Query: 1 AGIGDT 6
AGIGDT
Sbjct: 167 AGIGDT 172


>sp|G1PDH_SACI7|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 AGIGDT 6
AGIGDT
Sbjct: 167 AGIGDT 172


>sp|G1PDH_SACI2|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 AGIGDT 6
AGIGDT
Sbjct: 167 AGIGDT 172


>sp|G1PDH_SACI1|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 AGIGDT 6
AGIGDT
Sbjct: 167 AGIGDT 172


>sp|G1PDH_SULAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Sulfolobus acidocaldarius (strain ATCC

Query: 1 AGIGDT 6
AGIGDT
Sbjct: 167 AGIGDT 172


>sp|G1PDH_SACI6|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain M.16.4 /

Query: 1 AGIGDT 6
AGIGDT
Sbjct: 167 AGIGDT 172


>sp|G1PDH_SACI4|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain M.14.25 /

Query: 1 AGIGDT 6
AGIGDT
Sbjct: 167 AGIGDT 172


>sp|G1PDH_SACI3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus islandicus (strain M.16.27)

Query: 1 AGIGDT 6
AGIGDT
Sbjct: 167 AGIGDT 172


>sp|G1PDH_SULTO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 AGIGDT 6
AGIGDT
Sbjct: 166 AGIGDT 171


>sp|AROA_HALLT|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 3 IGDTPSL 9
+GDTP L
Sbjct: 325 VGDTPDL 331




23|Sequence|111|120|TPSLEDEAAG

>sp|THI4_HALMA|THIAMINE thiazole synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 PSLEDEAAG 10
P LEDEA+G
Sbjct: 203 PGLEDEASG 211


>sp|TRM14_ARCFU|TRNA (guanine(6)-N2)-methyltransferase|Archaeoglobus fulgidus (strain

Query: 1 TPSLEDEAA 9
TP LED AA
Sbjct: 38 TPGLEDVAA 46


>sp|Y1631_METJA|UNCHARACTERIZED protein MJ1631|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TPSLEDEAAG 10
TP L EA+G
Sbjct: 414 TPKLNHEASG 423


>sp|IF6_METST|TRANSLATION initiation factor 6|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 TPSLEDEA 8
PSL DEA
Sbjct: 113 NPSLSDEA 120




24|Sequence|116|125|DEAAGHVTQE

>sp|APGM_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DEAAGHVTQE 10
D +AGH+T E
Sbjct: 108 DHSAGHITSE 117


>sp|APGM_METTP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanothrix thermoacetophila (strain DSM

Query: 1 DEAAGHVTQE 10
D +AGH+T E
Sbjct: 108 DYSAGHITSE 117


>sp|URED_CENSY|UREASE accessory protein UreD|Cenarchaeum symbiosum (strain A)

Query: 1 DEAAGHVTQE 10
D+AA HVT +
Sbjct: 78 DKAAAHVTTQ 87


>sp|PUR5_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 AAGHVTQE 10
A GH+T+E
Sbjct: 102 AVGHITEE 109


>sp|MCRG_METVO|METHYL-COENZYME M reductase subunit gamma|Methanococcus voltae

Query: 1 DEAAGHV 7
DEA GH+
Sbjct: 182 DEATGHI 188




25|Sequence|121|130|HVTQEPESGK

>sp|NTPTH_AERPE|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Aeropyrum pernix (strain ATCC 700893

Query: 1 HVTQEPESGK 10
HVT P SGK
Sbjct: 21 HVTGPPGSGK 30


>sp|ASD_METTH|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanothermobacter

Query: 1 HVTQEPESGK 10
HV + P SGK
Sbjct: 102 HVNRAPVSGK 111


>sp|ASD_METMA|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanosarcina mazei

Query: 1 HVTQEPESGK 10
HV + P SGK
Sbjct: 91 HVNRAPISGK 100


>sp|ASD_METBF|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanosarcina barkeri

Query: 1 HVTQEPESGK 10
HV + P SGK
Sbjct: 90 HVNRAPISGK 99


>sp|ASD_METAC|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanosarcina

Query: 1 HVTQEPESGK 10
HV + P SGK
Sbjct: 91 HVNRAPISGK 100


>sp|SYR_SULTO|ARGININE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VTQEPESGK 10
V QEP GK
Sbjct: 585 VLQEPNEGK 593


>sp|ALAXM_PYRHO|ALANYL-TRNA editing protein AlaX-M|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HVTQEPESGK 10
HV +EPE K
Sbjct: 69 HVVKEPEKFK 78


>sp|RS27_METPE|SMALL ribosomal subunit protein eS27|Methanosphaerula palustris (strain

Query: 1 HVTQEPESGK 10
HV EP G+
Sbjct: 41 HVLAEPRGGR 50


>sp|CREN7_STAMF|CHROMATIN protein Cren7|Staphylothermus marinus (strain ATCC 43588

Query: 4 QEPESGK 10
Q+PE+GK
Sbjct: 42 QDPETGK 48


>sp|TRM1_HALMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloarcula marismortui

Query: 2 VTQEPESGK 10
V ++PE+GK
Sbjct: 12 VPEQPEAGK 20




26|Sequence|126|135|PESGKVVQEG

>sp|Y4342_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 PESGKVVQEG 10
PESGKV +G
Sbjct: 59 PESGKVTVDG 68


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 PESGKVV 7
PESGKVV
Sbjct: 1017 PESGKVV 1023


>sp|RL24_METS5|LARGE ribosomal subunit protein uL24|Metallosphaera sedula (strain ATCC

Query: 1 PESGKVVQEG 10
PESG++ EG
Sbjct: 50 PESGRIAIEG 59


>sp|EF1A_STAMF|ELONGATION factor 1-alpha|Staphylothermus marinus (strain ATCC 43588

Query: 1 PESGKVVQEG 10
P +GKVV+E
Sbjct: 368 PRTGKVVEEN 377


>sp|Y731_ARCFU|PUTATIVE ABC transporter ATP-binding protein|Archaeoglobus fulgidus

Query: 1 PESGKVVQEG 10
P+SGKV+ +G
Sbjct: 53 PKSGKVIIDG 62


>sp|Y719_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 PESGKVVQEG 10
P+ G+V++EG
Sbjct: 399 PDEGEVIKEG 408


>sp|RL35A_METKA|LARGE ribosomal subunit protein eL33|Methanopyrus kandleri (strain AV19

Query: 1 PESGKVVQ 8
PE+GKV++
Sbjct: 50 PETGKVIR 57


>sp|NOB1_METTH|ENDORIBONUCLEASE Nob1|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PESGKVVQEG 10
PES KVV++
Sbjct: 64 PESMKVVEDA 73


>sp|SYR_METJA|ARGININE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ESGKVVQE 9
E+GKV++E
Sbjct: 280 ETGKVIKE 287


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 3 SGKVVQE 9
SGK+VQE
Sbjct: 431 SGKIVQE 437


>sp|MOAC_PYRHO|PROBABLE cyclic pyranopterin monophosphate synthase|Pyrococcus horikoshii

Query: 1 PESGKVVQEG 10
PE+ K+++EG
Sbjct: 38 PETVKLIKEG 47


>sp|THIOL_METTL|ACETYL-COA acetyltransferase|Methanothermococcus thermolithotrophicus

Query: 2 ESGKVVQEG 10
++GKV+ EG
Sbjct: 305 DAGKVIDEG 313


>sp|Y3523_METJA|UNCHARACTERIZED protein MJECL23|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ESGKVVQEG 10
++GK+++EG
Sbjct: 562 KNGKILEEG 570


>sp|Y1418_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 ESGKVVQE 9
ESGKVV++
Sbjct: 468 ESGKVVED 475


>sp|ECFA_METAC|ENERGY-COUPLING factor transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 PESGKVVQE 9
P+SGK V E
Sbjct: 169 PDSGKAVLE 177


>sp|WTPC_METJA|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Methanocaldococcus jannaschii

Query: 1 PESGKVVQEG 10
P+SG+++ G
Sbjct: 51 PDSGRIILNG 60


>sp|RS6E_NANEQ|SMALL ribosomal subunit protein eS6|Nanoarchaeum equitans (strain

Query: 1 PESGKVVQ 8
P+SGK +Q
Sbjct: 14 PKSGKAIQ 21




27|Sequence|131|140|VVQEGFLREP

>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 2 VQEGFLREP 10
VQ GF+R P
Sbjct: 573 VQSGFIRVP 581


>sp|AATA_THEPD|A-TYPE ATP synthase subunit A|Thermofilum pendens (strain DSM 2475

Query: 1 VVQEGFLRE 9
+++EGFLR+
Sbjct: 498 IIKEGFLRQ 506


>sp|DTDA_HALWD|D-AMINOACYL-TRNA deacylase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VVQEGFLRE 9
VVQE +LRE
Sbjct: 264 VVQERWLRE 272


>sp|UVRB_NATPD|UVRABC system protein B|Natronomonas pharaonis (strain ATCC 35678

Query: 3 QEGFLR 8
QEGFLR
Sbjct: 535 QEGFLR 540


>sp|UVRB_HALMA|UVRABC system protein B|Haloarcula marismortui (strain ATCC 43049

Query: 3 QEGFLR 8
QEGFLR
Sbjct: 537 QEGFLR 542


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VVQEGFLRE 9
V++EG +RE
Sbjct: 949 VIKEGLVRE 957


>sp|Y1452_METJA|UNCHARACTERIZED protein MJ1452|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VVQEGFLRE 9
+++ GFL+E
Sbjct: 124 IIERGFLKE 132


>sp|ARGD_METKA|ACETYLORNITHINE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 4 EGFLRE 9
EGFLRE
Sbjct: 196 EGFLRE 201


>sp|GCSPA_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 2 VQEGFLRE 9
V EGF+RE
Sbjct: 31 VPEGFIRE 38


>sp|SYT_PYRNV|THREONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 VVQEGFLRE 9
V +EGFLR+
Sbjct: 46 VPEEGFLRQ 54


>sp|AATA_PYRAR|A-TYPE ATP synthase subunit A|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VVQEGFLRE 9
+++EGFL++
Sbjct: 499 MIREGFLKQ 507




28|Sequence|136|145|FLREPGPPGL

>sp|RFCL_METBF|REPLICATION factor C large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 FLREPGPPG 9
F R P PPG
Sbjct: 439 FFRTPAPPG 447


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EPGPPGL 10
EPGP GL
Sbjct: 789 EPGPSGL 795


>sp|COFG_METMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FLREPGPPG 9
F REPG PG
Sbjct: 24 FRREPGQPG 32


>sp|COFG_METBF|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 FLREPGPPG 9
F REPG PG
Sbjct: 24 FRREPGQPG 32


>sp|COFG_METAC|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FLREPGPPG 9
F REPG PG
Sbjct: 18 FRREPGQPG 26


>sp|PCNA_METMJ|DNA polymerase sliding clamp|Methanoculleus marisnigri (strain ATCC

Query: 3 REPGPPGL 10
++P PPG+
Sbjct: 118 KDPNPPGI 125


>sp|RRP42_SACS2|EXOSOME complex component Rrp42|Saccharolobus solfataricus (strain ATCC

Query: 4 EPGPP 8
EPGPP
Sbjct: 99 EPGPP 103


>sp|RRP42_SACI4|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.14.25 /

Query: 4 EPGPP 8
EPGPP
Sbjct: 99 EPGPP 103


>sp|RRP42_SACI3|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.27)

Query: 4 EPGPP 8
EPGPP
Sbjct: 99 EPGPP 103


>sp|RRP42_SACI1|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain Y.N.15.51

Query: 4 EPGPP 8
EPGPP
Sbjct: 99 EPGPP 103


>sp|RRP42_SACI7|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain Y.G.57.14

Query: 4 EPGPP 8
EPGPP
Sbjct: 99 EPGPP 103


>sp|RRP42_SACI6|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.4 /

Query: 4 EPGPP 8
EPGPP
Sbjct: 99 EPGPP 103


>sp|RRP42_SACI2|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 EPGPP 8
EPGPP
Sbjct: 99 EPGPP 103


>sp|RRP42_SULTO|EXOSOME complex component Rrp42|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 EPGPP 8
EPGPP
Sbjct: 99 EPGPP 103


>sp|CARA_THEVO|CARBAMOYL phosphate synthase small chain|Thermoplasma volcanium (strain ATCC

Query: 1 FLREPGPPGL 10
FL+E G PG+
Sbjct: 99 FLKEQGIPGI 108


>sp|CARA_METVS|CARBAMOYL phosphate synthase small chain|Methanococcus vannielii (strain ATCC

Query: 1 FLREPGPPGL 10
FL+E G PG+
Sbjct: 91 FLKEYGVPGI 100


>sp|RRP42_METAC|EXOSOME complex component Rrp42|Methanosarcina acetivorans (strain ATCC

Query: 4 EPGPP 8
EPGPP
Sbjct: 96 EPGPP 100


>sp|RRP42_METMA|EXOSOME complex component Rrp42|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 EPGPP 8
EPGPP
Sbjct: 96 EPGPP 100


>sp|NEP_NATMA|HALOLYSIN-LIKE extracellular serine protease Nep|Natrialba magadii

Query: 3 REPGP 7
REPGP
Sbjct: 37 REPGP 41


>sp|RRP42_METKA|EXOSOME complex component Rrp42|Methanopyrus kandleri (strain AV19 /

Query: 4 EPGPP 8
EPGPP
Sbjct: 94 EPGPP 98


>sp|RRP42_PYRFU|EXOSOME complex component Rrp42|Pyrococcus furiosus (strain ATCC 43587

Query: 4 EPGPP 8
EPGPP
Sbjct: 95 EPGPP 99


>sp|PYCA_METJA|PYRUVATE carboxylase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 3 REPGPPGL 10
R PG PG+
Sbjct: 358 RSPGGPGV 365


>sp|RRP42_THEON|EXOSOME complex component Rrp42|Thermococcus onnurineus (strain NA1)

Query: 4 EPGPP 8
EPGPP
Sbjct: 95 EPGPP 99


>sp|RRP42_ARCFU|EXOSOME complex component Rrp42|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 EPGPP 8
EPGPP
Sbjct: 94 EPGPP 98


>sp|RRP42_THEKO|EXOSOME complex component Rrp42|Thermococcus kodakarensis (strain ATCC

Query: 4 EPGPP 8
EPGPP
Sbjct: 95 EPGPP 99


>sp|RRP42_THEGJ|EXOSOME complex component Rrp42|Thermococcus gammatolerans (strain DSM

Query: 4 EPGPP 8
EPGPP
Sbjct: 95 EPGPP 99


>sp|FAU1_HYPBU|PROBABLE ribonuclease FAU-1|Hyperthermus butylicus (strain DSM 5456

Query: 4 EPGPPGL 10
E GPPG+
Sbjct: 238 EEGPPGV 244


>sp|RRP42_PYRAB|EXOSOME complex component Rrp42|Pyrococcus abyssi (strain GE5 /

Query: 4 EPGPP 8
EPGPP
Sbjct: 95 EPGPP 99


>sp|RRP42_METTH|EXOSOME complex component Rrp42|Methanothermobacter thermautotrophicus

Query: 4 EPGPP 8
EPGPP
Sbjct: 96 EPGPP 100


>sp|RRP42_PYRHO|EXOSOME complex component Rrp42|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 EPGPP 8
EPGPP
Sbjct: 95 EPGPP 99


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 FLREPGPPGL 10
F+R P PP L
Sbjct: 88 FVRTPMPPYL 97


>sp|RRP42_AERPE|EXOSOME complex component Rrp42|Aeropyrum pernix (strain ATCC 700893

Query: 4 EPGPP 8
EPGPP
Sbjct: 99 EPGPP 103


>sp|SRP54_HYPBU|SIGNAL recognition particle 54 kDa|Hyperthermus butylicus (strain DSM

Query: 2 LREPGPPGL 10
L+E PPGL
Sbjct: 58 LKEQPPPGL 66


>sp|FAU1_HALSA|PROBABLE ribonuclease FAU-1|Halobacterium salinarum (strain ATCC 700922

Query: 2 LREPGPP 8
+R+P PP
Sbjct: 139 IRDPAPP 145


>sp|FAU1_HALS3|PROBABLE ribonuclease FAU-1|Halobacterium salinarum (strain ATCC 29341

Query: 2 LREPGPP 8
+R+P PP
Sbjct: 139 IRDPAPP 145


>sp|LYSJ_AERPE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 FLREPGPP 8
FLRE G P
Sbjct: 286 FLREEGVP 293


>sp|AOR_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus furiosus (strain ATCC

Query: 1 FLREPGPPG 9
FL EP P G
Sbjct: 555 FLEEPMPEG 563


>sp|SRP54_STAMF|SIGNAL recognition particle 54 kDa|Staphylothermus marinus (strain ATCC

Query: 2 LREPGPPGL 10
L+E PPG+
Sbjct: 57 LKEEPPPGI 65




29|Sequence|141|150|GPPGLSHQLM

>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 2 PPGLSHQ 8
PPG+SH+
Sbjct: 130 PPGVSHR 136


>sp|RFRNP_PYRHO|RNA-FREE ribonuclease P|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PPGLSHQLM 10
PPG+ +LM
Sbjct: 47 PPGIYRELM 55


>sp|DTDA_METB6|D-AMINOACYL-TRNA deacylase|Methanoregula boonei (strain DSM 21154

Query: 1 GPPGLSH 7
GP GLSH
Sbjct: 129 GPTGLSH 135


>sp|PIP_THEVO|PROLINE iminopeptidase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GPPGLSHQLM 10
G PG+SH +
Sbjct: 38 GGPGMSHDYL 47


>sp|PYRI_METKA|ASPARTATE carbamoyltransferase regulatory chain|Methanopyrus kandleri

Query: 2 PPGLSHQLM 10
PPG + Q+M
Sbjct: 20 PPGTAPQIM 28


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 PPGLSHQL 9
P G SHQL
Sbjct: 1050 PAGSSHQL 1057


>sp|PIP_THEAC|PROLINE iminopeptidase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GPPGLSHQLM 10
G PG+SH +
Sbjct: 36 GGPGMSHDYL 45


>sp|RTCA_METKA|RNA 3'-terminal phosphate cyclase|Methanopyrus kandleri (strain AV19

Query: 3 PGLSHQ 8
PGLSHQ
Sbjct: 44 PGLSHQ 49


>sp|AATA_METB6|A-TYPE ATP synthase subunit A|Methanoregula boonei (strain DSM 21154

Query: 3 PGLSHQ 8
PGLSH+
Sbjct: 118 PGLSHE 123


>sp|AATA_METMJ|A-TYPE ATP synthase subunit A|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PGLSHQ 8
PGLSH+
Sbjct: 115 PGLSHE 120


>sp|LEUC_PYRHO|3-ISOPROPYLMALATE dehydratase large subunit|Pyrococcus horikoshii (strain ATCC

Query: 4 GLSHQLM 10
G+SHQL+
Sbjct: 86 GISHQLV 92


>sp|LEUC2_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus furiosus (strain ATCC

Query: 4 GLSHQLM 10
G+SHQL+
Sbjct: 86 GISHQLV 92


>sp|LEUC2_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 4 GLSHQLM 10
G+SHQL+
Sbjct: 86 GISHQLV 92




30|Sequence|146|155|SHQLMSGMPG

>sp|GATB_METST|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 1 SHQLMSGMPG 10
+H+L+ MPG
Sbjct: 363 AHKLIEQMPG 372


>sp|GLYA_METST|SERINE hydroxymethyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 1 SHQLMSGMPG 10
SH+ G+PG
Sbjct: 47 SHRYAEGLPG 56


>sp|AMPD_METSM|ANHYDROMEVALONATE phosphate decarboxylase|Methanobrevibacter smithii

Query: 2 HQLMSGMP 9
H+L+ G+P
Sbjct: 277 HKLLQGLP 284


>sp|AKSA_METTH|HOMOCITRATE synthase AksA|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 HQLMSGMP 9
HQ+ SG P
Sbjct: 56 HQIESGFP 63


>sp|GLYA_METTH|SERINE hydroxymethyltransferase|Methanothermobacter thermautotrophicus

Query: 1 SHQLMSGMPG 10
SH+ G+PG
Sbjct: 48 SHRYAEGLPG 57


>sp|AMPD_ARCFU|ANHYDROMEVALONATE phosphate decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HQLMSGMP 9
HQ++ G+P
Sbjct: 292 HQMLMGVP 299


>sp|Y4618_METAC|UPF0313 protein MA_4618|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 LMSGMPG 10
LMSG PG
Sbjct: 632 LMSGHPG 638


>sp|GLYA_METTM|SERINE hydroxymethyltransferase|Methanothermobacter marburgensis (strain

Query: 1 SHQLMSGMPG 10
SH+ G+PG
Sbjct: 48 SHRYAEGLPG 57


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 LMSGMPG 10
LMSG PG
Sbjct: 514 LMSGHPG 520


>sp|AMPD_METTH|ANHYDROMEVALONATE phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 2 HQLMSGMP 9
H+L+ G+P
Sbjct: 282 HRLLQGLP 289


>sp|CBIA_THEAC|COBYRINATE a,c-diamide synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 HQLMSGMP 9
H+L SG+P
Sbjct: 50 HRLASGVP 57




31|Sequence|151|160|SGMPGAPLLP

>sp|GATB_METKA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 SGMPGAPLLP 10
+GMPGA LP
Sbjct: 42 TGMPGAKPLP 51


>sp|DNAJ_METAC|CHAPERONE protein DnaJ|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SGMPGAP 7
SG PGAP
Sbjct: 238 SGEPGAP 244


>sp|BIOW_META3|6-CARBOXYHEXANOATE--COA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GMPGAPLL 9
GM GAP+L
Sbjct: 111 GMRGAPIL 118


>sp|RS6E_PYRAR|SMALL ribosomal subunit protein eS6|Pyrobaculum arsenaticum (strain DSM

Query: 1 SGMPGAPLLP 10
SG+ GAP++P
Sbjct: 61 SGIEGAPMVP 70


>sp|MALA_HALJT|ALPHA-AMYLASE MalA|Haloarcula japonica (strain ATCC 49778

Query: 3 MPGAPLL 9
+PGAPLL
Sbjct: 526 LPGAPLL 532


>sp|DNLI_PYRIL|DNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 PGAPLLP 10
PG P+LP
Sbjct: 220 PGVPVLP 226


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PGAPLLP 10
PG P+LP
Sbjct: 220 PGVPVLP 226


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 PGAPLLP 10
PG P+LP
Sbjct: 220 PGVPVLP 226


>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 PGAPLLP 10
PG P+LP
Sbjct: 220 PGVPVLP 226


>sp|RL10_SACI6|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 SGMPGAPLL 9
+GMP P+L
Sbjct: 132 TGMPAGPIL 140


>sp|RL10_SACI4|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 SGMPGAPLL 9
+GMP P+L
Sbjct: 132 TGMPAGPIL 140


>sp|RL10_SACI7|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 SGMPGAPLL 9
+GMP P+L
Sbjct: 132 TGMPAGPIL 140


>sp|RL10_SACI2|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 SGMPGAPLL 9
+GMP P+L
Sbjct: 132 TGMPAGPIL 140


>sp|RL10_SACI1|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 SGMPGAPLL 9
+GMP P+L
Sbjct: 132 TGMPAGPIL 140


>sp|RL10_SACI3|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 SGMPGAPLL 9
+GMP P+L
Sbjct: 132 TGMPAGPIL 140


>sp|RL10_SACS2|LARGE ribosomal subunit protein uL10|Saccharolobus solfataricus (strain

Query: 1 SGMPGAPLL 9
+GMP P+L
Sbjct: 132 TGMPAGPIL 140


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 PGAPLLP 10
PG P+LP
Sbjct: 220 PGVPVLP 226


>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 2 GMPGAPLLP 10
G PG LLP
Sbjct: 21 GYPGGALLP 29


>sp|Y544_THEVO|UNCHARACTERIZED solute-binding protein TV0544|Thermoplasma volcanium (strain ATCC

Query: 3 MPGAPLL 9
+PGAP+L
Sbjct: 313 LPGAPIL 319


>sp|RS6E_PYRNV|SMALL ribosomal subunit protein eS6|Pyrobaculum neutrophilum (strain

Query: 1 SGMPGAPLLP 10
SG+ GAP+ P
Sbjct: 61 SGIEGAPMHP 70


>sp|DPCKG_HYPBU|GTP-DEPENDENT dephospho-CoA kinase|Hyperthermus butylicus (strain DSM 5456

Query: 3 MPGAPLLP 10
MP A LLP
Sbjct: 23 MPAAKLLP 30




32|Sequence|156|165|APLLPEGPRE

>sp|Y614_PYRHO|UNCHARACTERIZED protein PH0614|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 APLLPEGPRE 10
AP+LP P+E
Sbjct: 53 APILPVNPKE 62


>sp|Y1435_PYRAB|UNCHARACTERIZED protein PYRAB14350|Pyrococcus abyssi (strain GE5 /

Query: 2 PLLPEGPRE 10
P+LP P+E
Sbjct: 54 PILPVNPKE 62


>sp|IORB_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorB|Archaeoglobus fulgidus (strain ATCC

Query: 1 APLLPEG 7
APL+PEG
Sbjct: 59 APLIPEG 65


>sp|Y1387_METMP|MEMO1 family protein MMP1387|Methanococcus maripaludis (strain DSM

Query: 3 LLPEGPRE 10
L P GPRE
Sbjct: 28 LNPRGPRE 35


>sp|GSA_METBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcoides burtonii (strain DSM 6242

Query: 1 APLLPEG 7
P+LPEG
Sbjct: 211 GPILPEG 217


>sp|THIM_METPE|HYDROXYETHYLTHIAZOLE kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 APLLPEGPRE 10
AP++ E P E
Sbjct: 41 APVMAEAPEE 50


>sp|CYAS_METB6|CYSTEATE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 APLLPEG 7
APLLP G
Sbjct: 60 APLLPSG 66




33|Sequence|161|170|EGPREATRQP

>sp|CSG_METTL|S-LAYER protein|Methanothermococcus thermolithotrophicus

Query: 2 GPREATRQ 9
G REATR+
Sbjct: 543 GDREATRE 550


>sp|PYRF_METAC|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina acetivorans (strain ATCC

Query: 1 EGPREATRQ 9
E P+EA RQ
Sbjct: 200 ESPKEAARQ 208


>sp|RL21_NATPD|LARGE ribosomal subunit protein eL21|Natronomonas pharaonis (strain

Query: 2 GPREATRQ 9
GPR+ATR
Sbjct: 6 GPRQATRN 13


>sp|MTAP_THEAC|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EGPREATR 8
EGPR +TR
Sbjct: 162 EGPRFSTR 169


>sp|MTAP_SACS2|S-METHYL-5'-THIOADENOSINE phosphorylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EGPREATR 8
EGPR +TR
Sbjct: 166 EGPRFSTR 173


>sp|PYRF_METBF|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EGPREATRQ 9
E PREA R+
Sbjct: 200 ESPREAARK 208


>sp|ACYP_NATPD|ACYLPHOSPHATASE pharaonis (strain ATCC 35678

Query: 1 EGPREAT 7
EGPREA
Sbjct: 50 EGPREAV 56


>sp|MTAP_THEKO|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EGPREATR 8
EGPR +TR
Sbjct: 158 EGPRFSTR 165


>sp|MTAP_PYRHO|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EGPREATR 8
EGPR +TR
Sbjct: 158 EGPRFSTR 165


>sp|MTAP_HYPBU|S-METHYL-5'-THIOADENOSINE phosphorylase|Hyperthermus butylicus (strain DSM 5456

Query: 1 EGPREATR 8
EGPR +TR
Sbjct: 170 EGPRFSTR 177


>sp|MTAP_PYRAB|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 1 EGPREATR 8
EGPR +TR
Sbjct: 158 EGPRFSTR 165


>sp|MTAP_AERPE|S-METHYL-5'-THIOADENOSINE phosphorylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EGPREATR 8
EGPR +TR
Sbjct: 171 EGPRFSTR 178


>sp|MTAP_THEPD|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermofilum pendens (strain DSM 2475

Query: 1 EGPREATR 8
EGPR +TR
Sbjct: 162 EGPRFSTR 169


>sp|MTAP_PYRFU|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EGPREATR 8
EGPR +TR
Sbjct: 158 EGPRFSTR 165


>sp|MTAP_CENSY|S-METHYL-5'-THIOADENOSINE phosphorylase|Cenarchaeum symbiosum (strain A)

Query: 1 EGPREATR 8
EGPR +TR
Sbjct: 140 EGPRFSTR 147




34|Sequence|166|175|ATRQPSGTGP

>sp|AATC_METJA|A-TYPE ATP synthase subunit C|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ATRQPSGTGP 10
+TR+P G GP
Sbjct: 352 STRKPFGVGP 361


>sp|ARLY_PYRAR|ARGININOSUCCINATE lyase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ATRQPSGTGP 10
A R P G GP
Sbjct: 184 AKRSPLGAGP 193


>sp|FEN_SULAC|FLAP endonuclease 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ATRQPSGT 8
A RQP GT
Sbjct: 38 AIRQPDGT 45


>sp|FEN_SULTO|FLAP endonuclease 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ATRQPSGT 8
A RQP GT
Sbjct: 38 AIRQPDGT 45


>sp|FEN_SACS2|FLAP endonuclease 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ATRQPSGT 8
A RQP GT
Sbjct: 38 AIRQPDGT 45


>sp|COBS_THEON|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermococcus onnurineus (strain NA1)

Query: 1 ATRQPSGTG 9
ATR+P G G
Sbjct: 137 ATRKPLGQG 145


>sp|COBS_THEGJ|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 ATRQPSGTG 9
ATR+P G G
Sbjct: 137 ATRKPLGQG 145


>sp|TRUD_METTH|PROBABLE tRNA pseudouridine synthase D|Methanothermobacter

Query: 4 QPSGTGP 10
+PSG+GP
Sbjct: 34 EPSGSGP 40


>sp|FEN_STAMF|FLAP endonuclease 1|Staphylothermus marinus (strain ATCC 43588

Query: 1 ATRQPSGT 8
A RQP GT
Sbjct: 42 AIRQPDGT 49


>sp|Y293_THEAC|PUTATIVE esterase Ta0293|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 QPSGTGP 10
+P GTGP
Sbjct: 86 RPIGTGP 92


>sp|FEN_HYPBU|FLAP endonuclease 1|Hyperthermus butylicus (strain DSM 5456

Query: 1 ATRQPSGT 8
A RQP GT
Sbjct: 41 AIRQPDGT 48


>sp|AATC_METTH|A-TYPE ATP synthase subunit C|Methanothermobacter thermautotrophicus

Query: 1 ATRQPSGTGP 10
A ++P G GP
Sbjct: 339 ALKKPFGVGP 348


>sp|RS8E_PICTO|SMALL ribosomal subunit protein eS8|Picrophilus torridus (strain ATCC

Query: 1 ATRQPSG 7
ATR+PSG
Sbjct: 8 ATRKPSG 14


>sp|FOLD_NITMS|BIFUNCTIONAL protein FolD|Nitrosopumilus maritimus (strain SCM1)

Query: 1 ATRQPSGTGP 10
AT P G GP
Sbjct: 256 ATPVPGGVGP 265


>sp|FEN_AERPE|FLAP endonuclease 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 ATRQPSGT 8
A RQP GT
Sbjct: 41 AIRQPDGT 48


>sp|RS10_KORCO|SMALL ribosomal subunit protein uS10|Korarchaeum cryptofilum (strain

Query: 1 ATRQPSGTG 9
A R PSG G
Sbjct: 50 ALRNPSGEG 58




35|Sequence|171|180|SGTGPEDTEG

>sp|PELO_THEAC|PROTEIN pelota homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 GPEDTEG 10
GPEDT+G
Sbjct: 88 GPEDTKG 94


>sp|FWDG_METKA|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanopyrus kandleri

Query: 2 GTGPEDTE 9
G GPED E
Sbjct: 34 GKGPEDGE 41


>sp|PELO_THEVO|PROTEIN pelota homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 4 GPEDTEG 10
GPEDT G
Sbjct: 88 GPEDTIG 94


>sp|SYP_THEKO|PROLINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 GPEDTEG 10
GP D EG
Sbjct: 350 GPRDVEG 356


>sp|FTSZ_THEAC|CELL division protein FtsZ|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SGTGPEDTE 9
SG+ PED E
Sbjct: 25 SGSLPEDAE 33


>sp|CBIA_THEVO|COBYRINATE a,c-diamide synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 PEDTEG 10
PEDT+G
Sbjct: 283 PEDTDG 288


>sp|EF1B_IGNH4|ELONGATION factor 1-beta|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 PEDTEG 10
PE+TEG
Sbjct: 61 PEETEG 66


>sp|RS10_NATPD|SMALL ribosomal subunit protein uS10|Natronomonas pharaonis (strain

Query: 1 SGTGPEDTE 9
+GT PED +
Sbjct: 9 AGTAPEDLD 17


>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 SGTGPEDTEG 10
S PEDT G
Sbjct: 186 SNAEPEDTRG 195




36|Sequence|176|185|EDTEGGRHAP

>sp|MTHT_METTF|TYPE II methyltransferase M.MthTI|Methanothermobacter thermautotrophicus

Query: 5 GGRHAP 10
GGRHAP
Sbjct: 242 GGRHAP 247


>sp|SYR_AERPE|ARGININE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EDTEGGRHA 9
E+ EG RHA
Sbjct: 609 EEWEGARHA 617


>sp|THYX_AERPE|FLAVIN-DEPENDENT thymidylate synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 DTEGGRHA 9
+TEGGR A
Sbjct: 128 ETEGGRKA 135


>sp|DHQS_METPE|3-DEHYDROQUINATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 EGGRH 8
EGGRH
Sbjct: 312 EGGRH 316


>sp|EF1B_AERPE|ELONGATION factor 1-beta|Aeropyrum pernix (strain ATCC 700893

Query: 1 EDTEGG 6
EDTEGG
Sbjct: 59 EDTEGG 64


>sp|AROC_METVS|CHORISMATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 5 GGRHAP 10
GGRH P
Sbjct: 336 GGRHDP 341


>sp|AROC_META3|CHORISMATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 GGRHAP 10
GGRH P
Sbjct: 335 GGRHDP 340




37|Sequence|181|190|GRHAPELLKH

>sp|SUMT_METBF|S-ADENOSYL-L-METHIONINE-DEPENDENT uroporphyrinogen III methyltransferase|Methanosarcina barkeri

Query: 1 GRHAPELLKH 10
GR+A EL+KH
Sbjct: 181 GRNAEELMKH 190


>sp|RFRNP_METMA|RNA-FREE ribonuclease P|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RHAPELLK 9
RH PE++K
Sbjct: 221 RHGPEVVK 228


>sp|ATGT_SACS2|TRNA-GUANINE(15) transglycosylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 HAPELLKH 10
H PE+++H
Sbjct: 378 HRPEIIRH 385


>sp|TRPC_METKA|INDOLE-3-GLYCEROL phosphate synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 GRHAPELLK 9
GR APEL+
Sbjct: 135 GREAPELID 143


>sp|ATGT_SULAC|TRNA-GUANINE(15) transglycosylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 HAPELLKH 10
H PE+++H
Sbjct: 375 HRPEVIRH 382


>sp|URE1_SULTO|UREASE subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GRHAPELLK 9
G HAP+++K
Sbjct: 278 GGHAPDIIK 286


>sp|TDXH_NANEQ|PEROXIREDOXIN equitans (strain Kin4-M)

Query: 1 GRHAPELLK 9
GR+ PE+L+
Sbjct: 142 GRNIPEILR 150


>sp|TOP1_AERPE|DNA topoisomerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 GRHAPELLKH 10
GR A ELLK
Sbjct: 338 GREARELLKE 347


>sp|ARGC_META3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 RHAPELLK 9
RH+PE+ K
Sbjct: 207 RHSPEIEK 214


>sp|URE1_NATPD|UREASE subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GRHAPELLK 9
G HAP++L+
Sbjct: 280 GGHAPDVLE 288


>sp|URE1_HALWD|UREASE subunit alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GRHAPELLK 9
G HAP++L+
Sbjct: 280 GGHAPDVLE 288




38|Sequence|186|195|ELLKHQLLGD

>sp|RS7_NATPD|SMALL ribosomal subunit protein uS7|Natronomonas pharaonis (strain ATCC

Query: 1 ELLKHQLLG 9
E L HQL+G
Sbjct: 170 EALAHQLIG 178


>sp|LMRAC_THEKO|LEUCINE/METHIONINE racemase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 KHQLLGD 10
KH+L+GD
Sbjct: 346 KHELIGD 352


>sp|KTHY_PYRAB|PROBABLE thymidylate kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 LLKHQLLG 9
L+KH+LLG
Sbjct: 197 LVKHELLG 204


>sp|KTHY_PYRHO|PROBABLE thymidylate kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LLKHQLLG 9
L+KH+LLG
Sbjct: 197 LVKHELLG 204


>sp|RPO5_METTH|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanothermobacter

Query: 1 ELLKHQLL 8
E+LKHQL+
Sbjct: 4 EILKHQLV 11


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ELLKHQLLGD 10
EL+KH+L +
Sbjct: 669 ELIKHRLFAE 678


>sp|HEM3_THEVO|PROBABLE porphobilinogen deaminase|Thermoplasma volcanium (strain ATCC

Query: 1 ELLKHQLLGD 10
E++KH+ GD
Sbjct: 32 EIVKHRSAGD 41


>sp|LYSY_PYRAE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 LLKHQLLGD 10
L KH LLG+
Sbjct: 162 LAKHGLLGE 170


>sp|PRIS_METMA|DNA primase small subunit PriS|Methanosarcina mazei (strain ATCC

Query: 1 ELLKHQLLGD 10
EL +H+ +GD
Sbjct: 247 ELRRHEKVGD 256




39|Sequence|191|200|QLLGDLHQEG

>sp|IF2P_METTH|PROBABLE translation initiation factor IF-2|Methanothermobacter

Query: 1 QLLGDLHQEG 10
+L+G LH+EG
Sbjct: 167 ELVGKLHEEG 176


>sp|IF2P_METS3|PROBABLE translation initiation factor IF-2|Methanobrevibacter smithii

Query: 1 QLLGDLHQEG 10
+++G+LH+EG
Sbjct: 167 EIVGELHKEG 176


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 3 LGDLHQEG 10
LGD HQ+G
Sbjct: 32 LGDPHQDG 39


>sp|IF2P_METKA|PROBABLE translation initiation factor IF-2|Methanopyrus kandleri (strain

Query: 1 QLLGDLHQEG 10
+L+G LHQ G
Sbjct: 172 ELIGQLHQHG 181


>sp|PELO_METMJ|PROTEIN pelota homolog|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 QLLGDLH 7
+LLGDLH
Sbjct: 241 RLLGDLH 247


>sp|IF2P_METST|PROBABLE translation initiation factor IF-2|Methanosphaera stadtmanae

Query: 1 QLLGDLHQEG 10
+++G LH+EG
Sbjct: 167 EIVGTLHEEG 176


>sp|SEPS_METMA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QLLGDLHQEG 10
++LGD+ +EG
Sbjct: 117 EILGDIGEEG 126


>sp|IF2P_HALWD|PROBABLE translation initiation factor IF-2|Haloquadratum walsbyi (strain

Query: 1 QLLGDLHQEG 10
+L+GDL EG
Sbjct: 195 ELIGDLSDEG 204


>sp|PYCA_METJA|PYRUVATE carboxylase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 1 QLLGDLH 7
QLLGD H
Sbjct: 212 QLLGDKH 218


>sp|THII_SACS2|PROBABLE tRNA sulfurtransferase|Saccharolobus solfataricus (strain ATCC

Query: 2 LLGDLHQE 9
L GDLH+E
Sbjct: 202 LGGDLHKE 209


>sp|MUTS_METTP|DNA mismatch repair protein MutS|Methanothrix thermoacetophila (strain

Query: 2 LLGDLHQ 8
+LGDLH+
Sbjct: 205 ILGDLHK 211


>sp|Y1265_ARCFU|UPF0173 metal-dependent hydrolase AF_1265|Archaeoglobus fulgidus (strain

Query: 1 QLLGDLHQ 8
QL+G+LH+
Sbjct: 149 QLIGELHR 156


>sp|ECFA_METST|ENERGY-COUPLING factor transporter ATP-binding protein|Methanosphaera stadtmanae

Query: 1 QLLGDLHQEG 10
QLL DL++EG
Sbjct: 181 QLLYDLNKEG 190


>sp|EF2_NANEQ|ELONGATION factor 2|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 LGDLHQE 9
LGDLH E
Sbjct: 449 LGDLHLE 455


>sp|VHOG_METMA|F420 non-reducing hydrogenase I small|Methanosarcina mazei (strain ATCC

Query: 2 LLGDLHQEG 10
LL DL++EG
Sbjct: 122 LLEDLYKEG 130


>sp|NSUN6_PYRHO|TRNA (cytosine(72)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 1 QLLGDLHQEG 10
+L+G+L +EG
Sbjct: 53 KLIGELKKEG 62


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LLGDLHQEG 10
L+G++H++G
Sbjct: 553 LIGNIHRKG 561


>sp|VHTG_METMA|F420 non-reducing hydrogenase II small|Methanosarcina mazei (strain ATCC

Query: 2 LLGDLHQEG 10
LL DL++EG
Sbjct: 122 LLEDLYKEG 130


>sp|KAE1B_METMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 QLLGDLHQEG 10
+L+G LH G
Sbjct: 450 ELVGKLHSSG 459


>sp|APGM1_METJA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanocaldococcus jannaschii (strain

Query: 4 GDLHQEG 10
GD H+EG
Sbjct: 164 GDPHEEG 170


>sp|RIBL_METMJ|FAD synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LLGDLH 7
LLGDLH
Sbjct: 68 LLGDLH 73


>sp|Y388_METJA|UNCHARACTERIZED protein MJ0388|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QLLGDLHQ 8
++LG+LH+
Sbjct: 123 EILGELHE 130


>sp|DNAK_HALSA|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 700922

Query: 1 QLLGDLHQEG 10
+LLGD H G
Sbjct: 425 ELLGDFHLTG 434


>sp|DNAK_HALS3|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 29341

Query: 1 QLLGDLHQEG 10
+LLGD H G
Sbjct: 425 ELLGDFHLTG 434




40|Sequence|196|205|LHQEGPPLKG

>sp|PYLB_METBF|3-METHYLORNITHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LHQEGPPLKG 10
L QEG PL+G
Sbjct: 240 LPQEGTPLEG 249


>sp|Y787_METJA|UNCHARACTERIZED protein MJ0787|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EGPPLKG 10
+GPP KG
Sbjct: 158 KGPPFKG 164


>sp|PUR2_METLZ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LHQEGPPLKG 10
L QEG P KG
Sbjct: 258 LAQEGSPYKG 267


>sp|CAPPA_PYRFU|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 GPPLKG 10
GPPL+G
Sbjct: 255 GPPLRG 260


>sp|SYFA_METKA|PHENYLALANINE--TRNA ligase alpha subunit|Methanopyrus kandleri (strain AV19 /

Query: 4 EGPPLKG 10
EGPPLK
Sbjct: 373 EGPPLKA 379


>sp|TRMY_HALMA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Haloarcula marismortui

Query: 1 LHQEGPPLKG 10
LH++G P+ G
Sbjct: 128 LHEDGDPIVG 137


>sp|IF2P_ARCFU|PROBABLE translation initiation factor IF-2|Archaeoglobus fulgidus (strain

Query: 1 LHQEGPPLK 9
L QEG P+K
Sbjct: 377 LRQEGIPIK 385


>sp|TRM1_HALWD|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloquadratum walsbyi

Query: 1 LHQEGP 6
LHQ GP
Sbjct: 113 LHQSGP 118


>sp|TRMY_HALLT|TRNA (pseudouridine(54)-N(1))-methyltransferase|Halorubrum lacusprofundi

Query: 1 LHQEGPPL 8
LH++G PL
Sbjct: 137 LHEDGDPL 144


>sp|TRMY_THEON|TRNA (pseudouridine(54)-N(1))-methyltransferase|Thermococcus onnurineus

Query: 1 LHQEGPPLK 9
LH+EG P++
Sbjct: 135 LHEEGRPIE 143


>sp|TRMY_THEGJ|TRNA (pseudouridine(54)-N(1))-methyltransferase|Thermococcus

Query: 1 LHQEGPPL 8
LH+EG P+
Sbjct: 134 LHEEGRPI 141


>sp|SPSS_METTP|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 HQEGPPL 8
H+EG PL
Sbjct: 186 HEEGVPL 192


>sp|LYSY_NITMS|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 LHQEGPPLKG 10
LH+ P LKG
Sbjct: 41 LHRVQPSLKG 50




41|Sequence|201|210|PPLKGAGGKE

>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 2 PLKGAGG 8
P++GAGG
Sbjct: 149 PIRGAGG 155


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 PLKGAGG 8
P++GAGG
Sbjct: 144 PIRGAGG 150


>sp|TRUB_THEAC|PROBABLE tRNA pseudouridine synthase B|Thermoplasma acidophilum (strain ATCC

Query: 4 KGAGGKE 10
KG GGKE
Sbjct: 352 KGGGGKE 358


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 PLKGAGG 8
P++GAGG
Sbjct: 146 PIRGAGG 152


>sp|PGK_ARCFU|PHOSPHOGLYCERATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PLKGAGGK 9
PLKG G K
Sbjct: 187 PLKGEGRK 194


>sp|PYRC_AERPE|DIHYDROOROTASE pernix (strain ATCC 700893

Query: 1 PPLKGAG 7
PPL+G G
Sbjct: 267 PPLRGVG 273


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 2 PLKGAGGKE 10
P++ AGG E
Sbjct: 155 PMRSAGGTE 163




42|Sequence|206|215|AGGKERPGSK

>sp|SYP_METTP|PROLINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 GKERPGSK 10
G ERPG+K
Sbjct: 330 GDERPGAK 337


>sp|SYP_ARCFU|PROLINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GKERPGSK 10
G++RPG+K
Sbjct: 321 GEDRPGAK 328


>sp|TTUA_METJA|TRNA-5-METHYLURIDINE(54) 2-sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 KERPGSK 10
KERPG K
Sbjct: 242 KERPGIK 248


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GGKERP 7
GGK+RP
Sbjct: 1007 GGKKRP 1012


>sp|SYC_METMA|CYSTEINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AGGKERPG 8
AGG+E PG
Sbjct: 416 AGGEEVPG 423


>sp|DHQS_METBU|3-DEHYDROQUINATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 AGGKERPG 8
AGGK+R G
Sbjct: 295 AGGKQRTG 302


>sp|RS8E_HYPBU|SMALL ribosomal subunit protein eS8|Hyperthermus butylicus (strain DSM

Query: 1 AGGKERPGSK 10
GGK+RP K
Sbjct: 13 TGGKKRPHQK 22


>sp|RNZ_NITMS|RIBONUCLEASE Z|Nitrosopumilus maritimus (strain SCM1)

Query: 3 GKERPGSK 10
G+ RPG K
Sbjct: 194 GERRPGKK 201




43|Sequence|211|220|RPGSKEEVDE

>sp|SECD_METJA|PROTEIN-EXPORT membrane protein SecD|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PGSKEEVDE 10
P +KEE+DE
Sbjct: 201 PPTKEEIDE 209


>sp|APAUH_THEKO|N(1)-AMINOPROPYLAGMATINE ureohydrolase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RPGSKEEVD 9
R G+KEEVD
Sbjct: 169 RSGTKEEVD 177


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PGSKEEVDE 10
PG ++EVDE
Sbjct: 207 PGIRDEVDE 215


>sp|SYY_PYRAR|TYROSINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 RPGSKEEVDE 10
+P SKEE+ E
Sbjct: 235 KPASKEELSE 244


>sp|Y1155_METJA|UPF0313 protein MJ1155|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PGSKEEVDE 10
P +KEE+DE
Sbjct: 4 PTTKEEMDE 12


>sp|SYY_PYRCJ|TYROSINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 RPGSKEEVDE 10
+P SKEE+ E
Sbjct: 235 KPSSKEELSE 244


>sp|HEM1_PYRIL|GLUTAMYL-TRNA reductase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 RPGSKEEVD 9
RP +KEEV+
Sbjct: 219 RPLTKEEVE 227


>sp|Y1209_PYRHO|UNCHARACTERIZED protein PH1209|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PGSKEEVDE 10
PG K E+DE
Sbjct: 21 PGYKGELDE 29


>sp|PURL_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PGSKEEVDE 10
PGS+EE+ E
Sbjct: 312 PGSEEEIIE 320


>sp|THII_DESA1|TRNA sulfurtransferase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 PGSKEEVD 9
PG EE+D
Sbjct: 391 PGYSEEID 398


>sp|MTXX_METMA|PUTATIVE methyltransferase mtx subunit X|Methanosarcina mazei (strain ATCC

Query: 3 GSKEEVDE 10
GSK+E+D+
Sbjct: 49 GSKKEIDK 56


>sp|LEUD_SACS2|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 PGSKEEVDE 10
P S +E+DE
Sbjct: 106 PNSTKEIDE 114


>sp|LEUD_SACI7|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 2 PGSKEEVDE 10
P S +E+DE
Sbjct: 106 PNSTKEIDE 114


>sp|LEUD_SACI6|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 2 PGSKEEVDE 10
P S +E+DE
Sbjct: 106 PNSTKEIDE 114


>sp|LEUD_SACI4|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain M.14.25

Query: 2 PGSKEEVDE 10
P S +E+DE
Sbjct: 106 PNSTKEIDE 114


>sp|LEUD_SACI2|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain L.S.2.15

Query: 2 PGSKEEVDE 10
P S +E+DE
Sbjct: 106 PNSTKEIDE 114


>sp|LEUD_SACI3|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain M.16.27)

Query: 2 PGSKEEVDE 10
P S +E+DE
Sbjct: 106 PNSTKEIDE 114




44|Sequence|216|225|EEVDEDRDVD

>sp|COST_HALSA|TRANSDUCER protein CosT|Halobacterium salinarum (strain ATCC 700922

Query: 2 EVDEDRDV 9
EVD DRDV
Sbjct: 797 EVDADRDV 804


>sp|COST_HALS3|TRANSDUCER protein CosT|Halobacterium salinarum (strain ATCC 29341

Query: 2 EVDEDRDV 9
EVD DRDV
Sbjct: 797 EVDADRDV 804


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EEVDEDRDV 9
E+++EDRD+
Sbjct: 682 EQLNEDRDL 690


>sp|SUCD_METTH|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Methanothermobacter

Query: 1 EEVDEDRDVD 10
EEV E+ DV+
Sbjct: 62 EEVTEEMDVN 71




45|Sequence|221|230|DRDVDESSPQ

>sp|LYEL_HALSA|LYCOPENE elongase/hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DRDVDESSPQ 10
DRDVDE++P+
Sbjct: 63 DRDVDETNPK 72


>sp|LYEL_HALVD|LYCOPENE elongase/hydratase|Haloferax volcanii (strain ATCC 29605

Query: 1 DRDVDESSPQ 10
D DVDE++P+
Sbjct: 89 DADVDEANPK 98


>sp|LYEL_HALJT|LYCOPENE elongase/hydratase|Haloarcula japonica (strain ATCC 49778

Query: 1 DRDVDESSPQ 10
D D+DE +P+
Sbjct: 81 DADIDEHNPK 90


>sp|TRUD_THEON|PROBABLE tRNA pseudouridine synthase D|Thermococcus onnurineus (strain NA1)

Query: 2 RDVDESS 8
RDVDES+
Sbjct: 136 RDVDESA 142


>sp|HEM1_ARCFU|GLUTAMYL-TRNA reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RDVDESSPQ 10
RDVDES Q
Sbjct: 270 RDVDESVAQ 278


>sp|TIAS_HALWD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Haloquadratum walsbyi (strain

Query: 1 DRDVDESS 8
DRDVDE S
Sbjct: 176 DRDVDEKS 183


>sp|SIHH_METMP|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 3 DVDESSPQ 10
D+DE SP+
Sbjct: 396 DIDELSPE 403


>sp|RS11_METKA|SMALL ribosomal subunit protein uS11|Methanopyrus kandleri (strain AV19

Query: 1 DRDVDESSP 9
D D +ESSP
Sbjct: 49 DADREESSP 57


>sp|HAC8_HALAS|PRE-PROTEIN-C8 sp. (strain AS7092)

Query: 3 DVDESSP 9
DVDESSP
Sbjct: 193 DVDESSP 199


>sp|QUEC_METMA|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DVDESSP 9
D+DE+SP
Sbjct: 87 DIDENSP 93


>sp|RL1_HYPBU|LARGE ribosomal subunit protein uL1|Hyperthermus butylicus (strain DSM

Query: 2 RDVDESSPQ 10
RD+D SPQ
Sbjct: 36 RDIDLRSPQ 44


>sp|Y1016_METJA|UNCHARACTERIZED protein MJ1016|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RDVDES 7
RDVDES
Sbjct: 289 RDVDES 294


>sp|DNLI_ARCFU|DNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DRDVDES 7
D+DVDE+
Sbjct: 530 DKDVDEA 536




46|Sequence|226|235|ESSPQDSPPS

>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 SSPQDSP 8
S PQD+P
Sbjct: 23 SEPQDTP 29


>sp|PIMT_KORCO|PROTEIN-L-ISOASPARTATE O-methyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 SPQDSPPS 10
+P DSPPS
Sbjct: 96 APSDSPPS 103




47|Sequence|231|240|DSPPSKASPA

>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PPSKASPA 10
PP++ SPA
Sbjct: 846 PPARYSPA 853


>sp|Y1451_METJA|UNCHARACTERIZED protein MJ1451|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PPSKASPA 10
PP+K +PA
Sbjct: 157 PPAKMTPA 164


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 SPPSKASP 9
SPP +A+P
Sbjct: 37 SPPRRATP 44


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PPSKASPA 10
PP++ SPA
Sbjct: 473 PPARYSPA 480


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 3 PPSKASPA 10
PP++ SPA
Sbjct: 473 PPARYSPA 480




48|Sequence|236|245|KASPAQDGRP

>sp|HTPX_METTH|PROTEASE HtpX homolog|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 KASPAQDGRP 10
+ SP Q GRP
Sbjct: 237 RLSPVQQGRP 246


>sp|HIS1_METAR|ATP phosphoribosyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 1 KASPAQDGR 9
KAS AQDGR
Sbjct: 186 KASLAQDGR 194


>sp|PURQ_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanopyrus kandleri (strain AV19 /

Query: 5 AQDGRP 10
A+DGRP
Sbjct: 76 AEDGRP 81




49|Sequence|241|250|QDGRPPQTAA

>sp|TRUA_NATPD|TRNA pseudouridine synthase A|Natronomonas pharaonis (strain ATCC

Query: 1 QDGRPPQTAA 10
+DGRPP AA
Sbjct: 41 EDGRPPGYAA 50


>sp|FEN_THEPD|FLAP endonuclease 1|Thermofilum pendens (strain DSM 2475

Query: 2 DGRPPQ 7
DGRPP+
Sbjct: 82 DGRPPE 87


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 2 DGRPPQT 8
DG+PP+T
Sbjct: 577 DGKPPET 583


>sp|FEN_SULTO|FLAP endonuclease 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DGRPPQTAA 10
DG+PP+ A
Sbjct: 80 DGKPPEQKA 88


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 2 DGRPPQT 8
DG+PP+T
Sbjct: 577 DGKPPET 583


>sp|FEN_SULAC|FLAP endonuclease 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DGRPPQ 7
DG+PP+
Sbjct: 80 DGKPPE 85


>sp|FEN_META3|FLAP endonuclease 1|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 DGRPPQ 7
DG+PP+
Sbjct: 80 DGKPPE 85


>sp|FEN_STAMF|FLAP endonuclease 1|Staphylothermus marinus (strain ATCC 43588

Query: 2 DGRPPQTAA 10
DG+PP+ A
Sbjct: 84 DGKPPEIKA 92


>sp|FEN_SACS2|FLAP endonuclease 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DGRPPQ 7
DG+PP+
Sbjct: 80 DGKPPE 85


>sp|FEN_THESM|FLAP endonuclease 1|Thermococcus sibiricus (strain DSM 12597

Query: 2 DGRPPQ 7
DG+PP+
Sbjct: 80 DGKPPE 85


>sp|FEN_METMA|FLAP endonuclease 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DGRPPQ 7
DG+PP+
Sbjct: 80 DGKPPE 85


>sp|FEN_PYRIL|FLAP endonuclease 1|Pyrobaculum islandicum (strain DSM 4184

Query: 2 DGRPPQ 7
DG+PP+
Sbjct: 84 DGKPPE 89


>sp|FEN_CENSY|FLAP endonuclease 1|Cenarchaeum symbiosum (strain A)

Query: 2 DGRPP 6
DGRPP
Sbjct: 80 DGRPP 84


>sp|FEN_PYRNV|FLAP endonuclease 1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 DGRPPQ 7
DG+PP+
Sbjct: 84 DGKPPE 89


>sp|FEN_PYRAE|FLAP endonuclease 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 DGRPPQ 7
DG+PP+
Sbjct: 84 DGKPPE 89




50|Sequence|246|255|PQTAAREATS

>sp|RIFK_METAR|RIBOFLAVIN kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PQTAAREATS 10
PQTAAR ++
Sbjct: 38 PQTAARRLSA 47




51|Sequence|251|260|REATSIPGFP

>sp|GLKA_PYRFU|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 REATSIP 7
REATS+P
Sbjct: 385 REATSVP 391


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 REATSIPGF 9
RE+T I GF
Sbjct: 79 RESTHIKGF 87


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 REATSIPGF 9
RE+T I GF
Sbjct: 79 RESTHIKGF 87


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 REATSIPGF 9
RE+T I GF
Sbjct: 79 RESTHIKGF 87


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 REATSIPGF 9
RE+T I GF
Sbjct: 79 RESTHIKGF 87


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 REATSIPGF 9
RE+T I GF
Sbjct: 79 RESTHIKGF 87


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 REATSIPGF 9
RE+T I GF
Sbjct: 79 RESTHIKGF 87


>sp|SYFB_METMJ|PHENYLALANINE--TRNA ligase beta subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 EATSIPGFP 10
+ T++PG+P
Sbjct: 532 DLTAVPGYP 540


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 REATSIPGF 9
RE+T I GF
Sbjct: 79 RESTHIKGF 87


>sp|GYRB_HALVD|DNA gyrase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 2 EATSIPG 8
E+TS+PG
Sbjct: 404 ESTSLPG 410


>sp|GYRB_HALL2|DNA gyrase subunit B|Haloferax lucentense (strain DSM 14919

Query: 2 EATSIPG 8
E+TS+PG
Sbjct: 404 ESTSLPG 410


>sp|GLNA_THEKO|GLUTAMINE synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 EATSIPGF 9
+ +SIPGF
Sbjct: 53 DGSSIPGF 60




52|Sequence|256|265|IPGFPAEGAI

>sp|TRUA_METJA|TRNA pseudouridine synthase A|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IPGFPAEGAI 10
+P FP EG I
Sbjct: 204 VPTFPPEGLI 213


>sp|RLME_METTH|RIBOSOMAL RNA large subunit methyltransferase|Methanothermobacter

Query: 1 IPGFPAE 7
I GFPAE
Sbjct: 79 IKGFPAE 85


>sp|KDPC_THEAC|POTASSIUM-TRANSPORTING ATPase KdpC subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PGFPAEGAI 10
PG P +GAI
Sbjct: 128 PGIPLQGAI 136


>sp|GLCD2_CALMQ|GLUCOSE 1-dehydrogenase 2|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 GFPAEGAI 10
GFP+EG +
Sbjct: 278 GFPSEGEL 285


>sp|Y392_METJA|ZINC metalloprotease MJ0392|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IPGFPAEGA 9
IP FP +G
Sbjct: 142 IPAFPMDGG 150


>sp|NADK_METPE|NAD kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 PGFPAE 7
PGFP E
Sbjct: 107 PGFPVE 112




53|Sequence|261|270|AEGAIPLPVD

>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 3 GAIPLPVD 10
G+IPLP D
Sbjct: 596 GSIPLPED 603


>sp|RPIA_THEAC|RIBOSE-5-PHOSPHATE isomerase A|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 GAIPLPVD 10
G+ PLPV+
Sbjct: 131 GSFPLPVE 138


>sp|RPIA_THEVO|RIBOSE-5-PHOSPHATE isomerase A|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GAIPLPVD 10
G+ PLPV+
Sbjct: 131 GSFPLPVE 138


>sp|ASSY_METVA|ARGININOSUCCINATE synthase|Methanococcus vannielii

Query: 2 EGAIPLPVD 10
E IP+PVD
Sbjct: 161 EKGIPIPVD 169


>sp|RPIA_METTH|RIBOSE-5-PHOSPHATE isomerase A|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 GAIPLPVD 10
GA PLPV+
Sbjct: 130 GAFPLPVE 137


>sp|ASSY_METMP|ARGININOSUCCINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 EGAIPLPVD 10
E IP+PVD
Sbjct: 161 EKGIPVPVD 169


>sp|AGOG_METKA|N-GLYCOSYLASE/DNA lyase|Methanopyrus kandleri (strain AV19 /

Query: 5 IPLPVD 10
IP+PVD
Sbjct: 170 IPIPVD 175


>sp|AGOG_PYRAE|N-GLYCOSYLASE/DNA lyase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 IPLPVD 10
IP+PVD
Sbjct: 167 IPIPVD 172


>sp|DGGGP_METTH|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 AEGAIPLPV 9
AEGA LP+
Sbjct: 179 AEGATTLPI 187


>sp|ASSY_METKA|ARGININOSUCCINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 EGAIPLPVD 10
E IP+PVD
Sbjct: 160 ERGIPVPVD 168


>sp|TIAS_CENSY|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Cenarchaeum symbiosum (strain

Query: 2 EGAIPLPV 9
EG IP PV
Sbjct: 106 EGGIPQPV 113


>sp|PYRC_METAC|DIHYDROOROTASE acetivorans (strain ATCC 35395

Query: 1 AEGAIPLP 8
AEGA+ LP
Sbjct: 47 AEGALTLP 54


>sp|NIFH2_METTL|NITROGENASE iron protein 2|Methanothermococcus thermolithotrophicus

Query: 2 EGAIPLPVD 10
EG IP P++
Sbjct: 262 EGTIPKPLE 270


>sp|HIS1_METKA|ATP phosphoribosyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 AEGAIPLPVD 10
AEG I LP++
Sbjct: 270 AEGIIVLPIE 279




54|Sequence|266|275|PLPVDFLSKV

>sp|Y1470_METJA|UNCHARACTERIZED protein MJ1470|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PLPVDFLSK 9
PLPV+FL K
Sbjct: 593 PLPVEFLIK 601


>sp|GGR_METBF|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PLPVDFLSK 9
P PVD+L+K
Sbjct: 235 PRPVDYLNK 243


>sp|MCRZ_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PLPVDFLSKV 10
PLP D+L+K+
Sbjct: 208 PLPHDYLAKI 217


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PLPVDFLSKV 10
PLP++F+ V
Sbjct: 395 PLPIEFIKDV 404


>sp|GGGPS_METST|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 LPVDFLSKV 10
+PVDF+ KV
Sbjct: 180 IPVDFIMKV 188


>sp|RTCA_PYRHO|RNA 3'-terminal phosphate cyclase|Pyrococcus horikoshii (strain ATCC

Query: 3 PVDFLSKV 10
PVD+LS V
Sbjct: 128 PVDYLSNV 135


>sp|SYFB_SACS2|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PLPVDFLSK 9
P+ +DFLSK
Sbjct: 412 PILLDFLSK 420


>sp|GGR_METMA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PLPVDFLS 8
P PVD+L+
Sbjct: 235 PRPVDYLN 242


>sp|GGR_METAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PLPVDFLS 8
P PVD+L+
Sbjct: 235 PRPVDYLN 242


>sp|Y626_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB06260|Pyrococcus abyssi (strain GE5 /

Query: 1 PLPVDFLSKV 10
P+P DFL ++
Sbjct: 101 PIPNDFLKQI 110


>sp|PUS10_CENSY|TRNA pseudouridine synthase Pus10|Cenarchaeum symbiosum (strain A)

Query: 2 LPVDFLSKV 10
LPV F SKV
Sbjct: 264 LPVRFRSKV 272


>sp|GCH3_PYRIL|GTP cyclohydrolase III|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PLPVDF 6
P+P+DF
Sbjct: 81 PVPIDF 86


>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 2 LPVDFLSK 9
LP++F+SK
Sbjct: 375 LPLEFISK 382


>sp|CP119_SULTO|CYTOCHROME P450 119|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LPVDFLSKV 10
LPVDF+ +V
Sbjct: 92 LPVDFVREV 100


>sp|MTIP_METKA|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanopyrus kandleri (strain

Query: 2 LPVDFL 7
LPVDFL
Sbjct: 97 LPVDFL 102


>sp|ALF1_AERPE|PROBABLE fructose-bisphosphate aldolase class 1|Aeropyrum pernix (strain

Query: 1 PLPVDFLSKV 10
P P +FL KV
Sbjct: 215 PSPQEFLHKV 224


>sp|Y574_METTH|UNCHARACTERIZED protein MTH_574|Methanothermobacter thermautotrophicus (strain

Query: 1 PLPVDFLS 8
PLPV F+S
Sbjct: 13 PLPVTFIS 20


>sp|CP119_SULAC|CYTOCHROME P450 119|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PLPVDFLSKV 10
PLP+ +SK+
Sbjct: 124 PLPIIVISKI 133


>sp|APGM_PYRFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LPVDFLSK 9
+PVDF+ K
Sbjct: 135 IPVDFIFK 142


>sp|Y3544_METJA|UNCHARACTERIZED protein MJECL44|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LPVDFLSK 9
+PV+FL K
Sbjct: 70 IPVEFLGK 77


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 PLPVDFLS 8
P P DFLS
Sbjct: 728 PKPEDFLS 735




55|Sequence|271|280|FLSKVSTEIP

>sp|DNLI_THEAC|DNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LSKVSTEIP 10
L KVS+EIP
Sbjct: 327 LDKVSSEIP 335


>sp|DNLI_THEVO|DNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LSKVSTEIP 10
L KVS EIP
Sbjct: 327 LDKVSNEIP 335


>sp|RS15_METB6|SMALL ribosomal subunit protein uS15|Methanoregula boonei (strain DSM

Query: 3 SKVSTEIP 10
+KVS+EIP
Sbjct: 78 NKVSSEIP 85




56|Sequence|276|285|STEIPASEPD

>sp|PRIS_METMP|DNA primase small subunit PriS|Methanococcus maripaludis (strain DSM

Query: 1 STEIPAS 7
STEIPAS
Sbjct: 335 STEIPAS 341


>sp|PRIS_METM6|DNA primase small subunit PriS|Methanococcus maripaludis (strain C6 /

Query: 1 STEIPAS 7
STEIPAS
Sbjct: 335 STEIPAS 341


>sp|PRIS_METM7|DNA primase small subunit PriS|Methanococcus maripaludis (strain C7 /

Query: 1 STEIPAS 7
STEIPAS
Sbjct: 341 STEIPAS 347


>sp|PANE_PYRHO|2-DEHYDROPANTOATE 2-reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 STEIPASEPD 10
+T IP ++PD
Sbjct: 58 TTSIPGAKPD 67


>sp|PRIS_METM5|DNA primase small subunit PriS|Methanococcus maripaludis (strain C5 /

Query: 1 STEIPAS 7
STEIPAS
Sbjct: 335 STEIPAS 341


>sp|RS3A_PYRIL|SMALL ribosomal subunit protein eS1|Pyrobaculum islandicum (strain DSM

Query: 3 EIPASEP 9
E+PASEP
Sbjct: 43 EVPASEP 49


>sp|Y1880_ARCFU|UNCHARACTERIZED protein AF_1880|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 IPASEPD 10
+PAS+PD
Sbjct: 3 MPASKPD 9


>sp|Y946_ARCFU|UNCHARACTERIZED protein AF_0946|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 STEIPASEPD 10
+T++P EPD
Sbjct: 674 TTDVPYMEPD 683


>sp|MUTS_NATPD|DNA mismatch repair protein MutS|Natronomonas pharaonis (strain ATCC

Query: 2 TEIPASEP 9
T++PA+EP
Sbjct: 610 TDLPATEP 617


>sp|ARCA_HALS3|ARGININE deiminase|Halobacterium salinarum (strain ATCC 29341

Query: 3 EIPASEPD 10
E+P S PD
Sbjct: 150 EVPGSNPD 157


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 2 TEIPASEPD 10
T++P + PD
Sbjct: 221 TDVPQNSPD 229




57|Sequence|281|290|ASEPDGPSVG

>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ASEPDGPSVG 10
A PDGPS+G
Sbjct: 530 AYTPDGPSIG 539


>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 EPDGPSVG 10
EP GP +G
Sbjct: 754 EPRGPKIG 761


>sp|RBL_THEON|RIBULOSE bisphosphate carboxylase|Thermococcus onnurineus (strain NA1)

Query: 4 PDGPSVG 10
PDGP+ G
Sbjct: 398 PDGPAAG 404


>sp|TMCA_HALMA|TRNA(MET) cytidine acetyltransferase TmcA|Haloarcula marismortui (strain ATCC

Query: 1 ASEPDGPSV 9
AS PDGP V
Sbjct: 331 ASLPDGPDV 339


>sp|RBL_THEKO|RIBULOSE bisphosphate carboxylase|Thermococcus kodakarensis (strain ATCC

Query: 4 PDGPSVG 10
PDGP+ G
Sbjct: 398 PDGPAAG 404


>sp|SPEE_THEVO|POLYAMINE aminopropyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ASEPDGPSVG 10
+++P+GP+ G
Sbjct: 159 STDPEGPAEG 168


>sp|ENDA_AERPE|TRNA-SPLICING endonuclease|Aeropyrum pernix (strain ATCC 700893

Query: 1 ASEPDGPSVG 10
++PDG SVG
Sbjct: 72 VAKPDGSSVG 81


>sp|SPEE_THEAC|POLYAMINE aminopropyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ASEPDGPSVG 10
+++P+GP+ G
Sbjct: 159 STDPEGPAEG 168


>sp|BACS_HALSD|SENSORY rhodopsin|Halorubrum sodomense

Query: 1 ASEPDGPSVG 10
A++ DGP+VG
Sbjct: 229 AAKGDGPAVG 238


>sp|RBL_PYRFU|RIBULOSE bisphosphate carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PDGPSVG 10
PDGP G
Sbjct: 374 PDGPRAG 380


>sp|RBLL_ARCFU|RIBULOSE bisphosphate carboxylase-like protein|Archaeoglobus fulgidus

Query: 2 SEPDGPSVG 10
+ PDGP+ G
Sbjct: 393 AHPDGPAAG 401


>sp|RBL_PYRHO|RIBULOSE bisphosphate carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PDGPSVG 10
PDGP G
Sbjct: 379 PDGPRAG 385


>sp|RBL_PYRAB|RIBULOSE bisphosphate carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 4 PDGPSVG 10
PDGP G
Sbjct: 378 PDGPRAG 384


>sp|IF2P_NATPD|PROBABLE translation initiation factor IF-2|Natronomonas pharaonis (strain

Query: 1 ASEPDGPSVG 10
A+ DGP+VG
Sbjct: 540 AASIDGPTVG 549


>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 SEPDGPSV 9
++PDGP V
Sbjct: 288 ADPDGPLV 295




58|Sequence|286|295|GPSVGRAKGQ

>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VGRAKGQ 10
VGRAKG+
Sbjct: 537 VGRAKGK 543


>sp|SEPS_METPE|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 PSVGRAKGQ 10
P+VG A+GQ
Sbjct: 103 PNVGIARGQ 111


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PSVGRAKGQ 10
P+VG+A G+
Sbjct: 523 PAVGKALGE 531


>sp|SYE_KORCO|GLUTAMATE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 PSVGRAKG 9
P++G AKG
Sbjct: 105 PTLGHAKG 112




59|Sequence|291|300|RAKGQDAPLE

>sp|PURL_PYRNV|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 RAKGQDAPL 9
R +G DAPL
Sbjct: 56 RGRGTDAPL 64


>sp|PGK2_METM6|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C6 /

Query: 1 RAKGQDAPLE 10
RAK D PLE
Sbjct: 242 RAKVSDRPLE 251


>sp|PGK2_METM7|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C7 /

Query: 1 RAKGQDAPLE 10
RAK D PLE
Sbjct: 242 RAKVSDRPLE 251


>sp|PGK2_METMP|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 RAKGQDAPLE 10
RAK D PLE
Sbjct: 241 RAKVSDRPLE 250


>sp|PGK2_METVS|2-PHOSPHOGLYCERATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 RAKGQDAPLE 10
RAK D PLE
Sbjct: 242 RAKVSDRPLE 251


>sp|PGK2_METM5|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C5 /

Query: 1 RAKGQDAPLE 10
RAK D PLE
Sbjct: 242 RAKVSDRPLE 251


>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 1 RAKGQDAPL 9
R +G DAPL
Sbjct: 56 RGRGTDAPL 64


>sp|PCNA_METKA|DNA polymerase sliding clamp|Methanopyrus kandleri (strain AV19 /

Query: 4 GQDAPLE 10
GQD PLE
Sbjct: 224 GQDMPLE 230


>sp|DAPA_METBF|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 GQDAPLE 10
GQD PLE
Sbjct: 138 GQDMPLE 144


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RAKGQDAPL 9
R G DAPL
Sbjct: 56 RGPGTDAPL 64


>sp|PURL_PYRAR|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 RAKGQDAPL 9
R G DAPL
Sbjct: 56 RGPGTDAPL 64


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 RAKGQDAPLE 10
R QDAP+E
Sbjct: 536 RPAWQDAPME 545


>sp|KHSE_THEGJ|HOMOSERINE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 RAKGQDAP 8
R KG D P
Sbjct: 41 RVKGHDVP 48




60|Sequence|296|305|DAPLEFTFHV

>sp|PCNA_METPE|DNA polymerase sliding clamp|Methanosphaerula palustris (strain ATCC

Query: 1 DAPLEFTFHV 10
D P+EFTF +
Sbjct: 220 DHPVEFTFDI 229


>sp|PCNA_METKA|DNA polymerase sliding clamp|Methanopyrus kandleri (strain AV19 /

Query: 1 DAPLEFTFHV 10
D PLE TF +
Sbjct: 226 DMPLELTFRI 235


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 3 PLEFTFH 9
P+EF FH
Sbjct: 781 PIEFFFH 787


>sp|FDHB_METJA|F420-DEPENDENT formate dehydrogenase subunit beta|Methanocaldococcus jannaschii

Query: 1 DAPLEFTFH 9
D PL + FH
Sbjct: 343 DIPLAYIFH 351


>sp|TF2B_METPE|TRANSCRIPTION initiation factor IIB|Methanosphaerula palustris (strain ATCC

Query: 2 APLEFTFH 9
AP+ FT H
Sbjct: 91 APMTFTIH 98


>sp|TF2B_METMJ|TRANSCRIPTION initiation factor IIB|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 APLEFTFH 9
AP+ FT H
Sbjct: 94 APMTFTIH 101


>sp|TF2B_METB6|TRANSCRIPTION initiation factor IIB|Methanoregula boonei (strain DSM 21154

Query: 2 APLEFTFH 9
AP+ FT H
Sbjct: 91 APMTFTIH 98


>sp|PCNA_METAR|DNA polymerase sliding clamp|Methanocella arvoryzae (strain DSM 22066

Query: 1 DAPLEFTFHV 10
D P++FTF +
Sbjct: 219 DYPVKFTFSI 228


>sp|TOP3_SACS2|DNA topoisomerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DAPLEFT 7
D PLEFT
Sbjct: 420 DFPLEFT 426


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 2 APLEFTFH 9
+P EF FH
Sbjct: 1251 SPTEFFFH 1258


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 2 APLEFTFH 9
AP E+ FH
Sbjct: 799 APTEYFFH 806


>sp|GATB_HALMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloarcula marismortui (strain ATCC

Query: 1 DAPLEFTFH 9
D P E TFH
Sbjct: 78 DIPAETTFH 86


>sp|SYY_THEON|TYROSINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 DAPLEFTFH 9
+ P EFT H
Sbjct: 300 EEPTEFTIH 308


>sp|RPO3_HALMA|DNA-DIRECTED RNA polymerase subunit Rpo3|Haloarcula marismortui (strain ATCC

Query: 1 DAPLEFTFHV 10
D P F FHV
Sbjct: 218 DVPNAFVFHV 227


>sp|SYY_THEKO|TYROSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DAPLEFTFH 9
+ P EFT H
Sbjct: 300 EEPTEFTIH 308


>sp|SYY_THESM|TYROSINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 DAPLEFTFH 9
+ P EFT H
Sbjct: 300 EEPTEFTIH 308


>sp|SYY_THEGJ|TYROSINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 DAPLEFTFH 9
+ P EFT H
Sbjct: 300 EEPTEFTIH 308


>sp|SYY_PYRFU|TYROSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DAPLEFTFH 9
+ P EFT H
Sbjct: 300 EEPTEFTIH 308


>sp|SYY_PYRAB|TYROSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 DAPLEFTFH 9
+ P EFT H
Sbjct: 300 EEPTEFTIH 308


>sp|SYY_PYRHO|TYROSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DAPLEFTFH 9
+ P EFT H
Sbjct: 300 EEPTEFTVH 308




61|Sequence|301|310|FTFHVEITPN

>sp|KTHY2_SACS2|PROBABLE thymidylate kinase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FTFHVEITP 9
FTF++ +TP
Sbjct: 123 FTFYIRVTP 131


>sp|SYFB_ARCFU|PHENYLALANINE--TRNA ligase beta subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 HVEITPN 10
HVE+TPN
Sbjct: 262 HVELTPN 268


>sp|PDXT_HALWD|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Haloquadratum walsbyi (strain

Query: 3 FHVEITPN 10
FH E+TP+
Sbjct: 175 FHPELTPD 182


>sp|TRUA_METKA|TRNA pseudouridine synthase A|Methanopyrus kandleri (strain AV19 /

Query: 5 VEITPN 10
VEITPN
Sbjct: 151 VEITPN 156


>sp|RPO1C_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma volcanium (strain ATCC

Query: 1 FTFHVEIT 8
FT+HV I+
Sbjct: 44 FTYHVSIS 51


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 FTFHVEITP 9
FT H ITP
Sbjct: 636 FTHHKAITP 644


>sp|RL3_THESM|LARGE ribosomal subunit protein uL3|Thermococcus sibiricus (strain DSM

Query: 5 VEITPN 10
+EITPN
Sbjct: 297 IEITPN 302


>sp|SERA_METJA|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TFHVEITP 9
T HV +TP
Sbjct: 199 TLHVPLTP 206


>sp|PDXT_METBU|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcoides burtonii

Query: 1 FTFHVEIT 8
F FH E+T
Sbjct: 176 FAFHPELT 183


>sp|SERA_METTH|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 TFHVEITP 9
T HV +TP
Sbjct: 200 TIHVPLTP 207


>sp|HIS7_HALWD|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 FTFHVEIT 8
FT H EIT
Sbjct: 156 FTMHSEIT 163




62|Sequence|306|315|EITPNVQKEQ

>sp|KADA_THEON|ADENYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 EITPNVQKE 9
++ PNVQKE
Sbjct: 57 KLNPNVQKE 65


>sp|PIP_THEAC|PROLINE iminopeptidase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EITPNVQK 8
E+TPNV +
Sbjct: 245 EVTPNVAR 252


>sp|GSA_METKA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanopyrus kandleri (strain AV19 /

Query: 1 EITPNVQK 8
E+ PNV+K
Sbjct: 104 ELVPNVEK 111


>sp|Y919_METJA|UNCHARACTERIZED protein MJ0919|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TPNVQKE 9
TPN++KE
Sbjct: 74 TPNLEKE 80




63|Sequence|311|320|VQKEQAHSEE

>sp|Y787_METJA|UNCHARACTERIZED protein MJ0787|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VQKEQAHSEE 10
++KE+ H++E
Sbjct: 175 IEKEKEHADE 184




64|Sequence|316|325|AHSEEHLGRA

>sp|Y153_THEVO|UPF0284 protein TV0153|Thermoplasma volcanium (strain ATCC 51530

Query: 2 HSEEHLGR 9
H+ EH+GR
Sbjct: 134 HAGEHIGR 141


>sp|T1SX_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 HSEEHLGR 9
+SEEH+G+
Sbjct: 97 NSEEHIGK 104


>sp|COBS2_ARCFU|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AHSEEHLG 8
A+SE+H G
Sbjct: 196 AYSEKHFG 203


>sp|AGLD_HALVD|GLYCOSYLTRANSFERASE AglD|Haloferax volcanii (strain ATCC 29605

Query: 2 HSEEHLGR 9
HS++ LGR
Sbjct: 83 HSDDRLGR 90


>sp|Y1804_AERPE|UNCHARACTERIZED protein APE_1804|Aeropyrum pernix (strain ATCC 700893

Query: 2 HSEEH 6
HSEEH
Sbjct: 379 HSEEH 383


>sp|Y1276_AERPE|UNCHARACTERIZED protein APE_1276|Aeropyrum pernix (strain ATCC 700893

Query: 2 HSEEH 6
HSEEH
Sbjct: 332 HSEEH 336




65|Sequence|321|330|HLGRAAFPGA

>sp|PYLD_METBF|PYRROLYSINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LGRAAFPGA 10
LG+ FPGA
Sbjct: 153 LGKVGFPGA 161


>sp|PYLD_METAC|PYRROLYSINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LGRAAFPGA 10
LG+ FPGA
Sbjct: 149 LGKVGFPGA 157


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain

Query: 2 LGRAAFPG 9
+GRAA PG
Sbjct: 30 VGRAALPG 37


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 HLGRAAFPG 9
H+G FPG
Sbjct: 41 HMGPTPFPG 49


>sp|SYH_HALSA|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 5 AAFPGA 10
AAFPGA
Sbjct: 417 AAFPGA 422


>sp|SYH_HALS3|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 5 AAFPGA 10
AAFPGA
Sbjct: 417 AAFPGA 422


>sp|ENO3_METHJ|ENOLASE 3|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LGRAAFPGA 10
GRAA PG
Sbjct: 31 FGRAAAPGG 39


>sp|ARLY_METKA|ARGININOSUCCINATE lyase|Methanopyrus kandleri (strain AV19 /

Query: 2 LGRAAFPGA 10
LG +AFPG+
Sbjct: 195 LGCSAFPGS 203


>sp|TNAA_HALSA|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 700922

Query: 1 HLGRAAFP 8
LGR AFP
Sbjct: 377 ELGRFAFP 384


>sp|TNAA_HALS3|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 29341

Query: 1 HLGRAAFP 8
LGR AFP
Sbjct: 377 ELGRFAFP 384


>sp|SFSA_PYRIL|SUGAR fermentation stimulation protein homolog|Pyrobaculum islandicum

Query: 3 GRAAFPGA 10
GRA FP A
Sbjct: 139 GRALFPDA 146


>sp|SEPS_METMJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LGRAAFPGA 10
LGRA PG
Sbjct: 119 LGRAVSPGT 127




66|Sequence|326|335|AFPGAPGEGP

>sp|RPO2N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanocaldococcus jannaschii (strain

Query: 2 FPGAPGEGP 10
FPG PG+ P
Sbjct: 213 FPGMPGQIP 221


>sp|RPO2N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 1 AFPGAPGEGP 10
+FP PGE P
Sbjct: 213 SFPYVPGELP 222


>sp|RPO2N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 1 AFPGAPGEGP 10
+FP PGE P
Sbjct: 219 SFPYVPGEIP 228


>sp|GLNK2_ARCFU|NITROGEN regulatory protein GlnK2|Archaeoglobus fulgidus (strain ATCC

Query: 1 AFPGAPGEG 9
AF G+PG+G
Sbjct: 81 AFTGSPGDG 89


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FPGAPGEG 9
FP A GEG
Sbjct: 199 FPAADGEG 206


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FPGAPGEG 9
+PGA G+G
Sbjct: 894 YPGADGDG 901


>sp|FBP_PYRFU|FRUCTOSE-1,6-BISPHOSPHATASE furiosus (strain ATCC 43587

Query: 2 FPGAPGEG 9
F G PGEG
Sbjct: 125 FEGIPGEG 132


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 1 AFPGAPGEGP 10
+FP PG+ P
Sbjct: 213 SFPAVPGKIP 222


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 1 AFPGAPGEGP 10
+FP PG+ P
Sbjct: 213 SFPAVPGKIP 222


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 APGEGP 10
APG GP
Sbjct: 332 APGHGP 337


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 5 APGEGP 10
APG GP
Sbjct: 319 APGHGP 324


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 APGEGP 10
APG GP
Sbjct: 319 APGHGP 324


>sp|SECD_THEGJ|PROTEIN-EXPORT membrane protein SecD|Thermococcus gammatolerans (strain DSM 15229

Query: 2 FPGAPGEG 9
F GAP EG
Sbjct: 205 FMGAPSEG 212


>sp|HEM3_IGNH4|PROBABLE porphobilinogen deaminase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 FPGAPGEG 9
FP +PG+G
Sbjct: 191 FPPSPGQG 198


>sp|RRP42_PYRAE|EXOSOME complex component Rrp42|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 FPGAPGEG 9
FP AP EG
Sbjct: 76 FPDAPDEG 83


>sp|Y1393_METJA|UNCHARACTERIZED protein MJ1393|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FPGAPGEG 9
+PGA G+G
Sbjct: 519 YPGADGDG 526


>sp|HEM3_AERPE|PROBABLE porphobilinogen deaminase|Aeropyrum pernix (strain ATCC 700893

Query: 2 FPGAPGEG 9
FP APG+G
Sbjct: 191 FPPAPGQG 198


>sp|PURA_THEON|ADENYLOSUCCINATE synthetase|Thermococcus onnurineus (strain NA1)

Query: 1 AFPGAPGEGP 10
+FP GEGP
Sbjct: 223 SFPTRVGEGP 232


>sp|ULIL_METAC|ULILYSIN acetivorans (strain ATCC 35395

Query: 2 FPGAPGE 8
FPG P E
Sbjct: 193 FPGGPAE 199


>sp|TRUA_PYRAE|TRNA pseudouridine synthase A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AFPGAPGEG 9
A P AP EG
Sbjct: 196 AVPSAPAEG 204


>sp|MRE11_AERPE|DNA double-strand break repair protein|Aeropyrum pernix (strain ATCC

Query: 3 PGAPGEGP 10
PG GEGP
Sbjct: 342 PGLQGEGP 349


>sp|DPS_PYRFU|DNA protection during starvation protein|Pyrococcus furiosus (strain

Query: 4 GAPGEGP 10
G PGE P
Sbjct: 170 GKPGESP 176


>sp|FEN_PYRIL|FLAP endonuclease 1|Pyrobaculum islandicum (strain DSM 4184

Query: 4 GAPGEGP 10
G PG GP
Sbjct: 244 GVPGVGP 250


>sp|RNP2_AERPE|RIBONUCLEASE P protein component 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 PGAPGEG 9
PGAPG G
Sbjct: 115 PGAPGRG 121


>sp|MTRH_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanosarcina mazei (strain ATCC

Query: 2 FPGAPGEGP 10
F G PGE P
Sbjct: 18 FGGQPGENP 26


>sp|PURA_META3|ADENYLOSUCCINATE synthetase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 AFPGAPGEGP 10
++P GEGP
Sbjct: 223 SYPTRVGEGP 232




67|Sequence|331|340|PGEGPEARGP

>sp|APT_METVS|ADENINE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 4 GPEARG 9
GPEARG
Sbjct: 54 GPEARG 59


>sp|APT_METM7|ADENINE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 4 GPEARG 9
GPEARG
Sbjct: 54 GPEARG 59


>sp|APT_METMP|ADENINE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 4 GPEARG 9
GPEARG
Sbjct: 54 GPEARG 59


>sp|KORC_METJA|2-OXOGLUTARATE synthase subunit KorC|Methanocaldococcus jannaschii (strain ATCC

Query: 4 GPEARG 9
GPEARG
Sbjct: 48 GPEARG 53


>sp|APT_METM5|ADENINE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 4 GPEARG 9
GPEARG
Sbjct: 54 GPEARG 59


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PGEGPE 6
PG GPE
Sbjct: 333 PGHGPE 338


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PGEGPE 6
PG GPE
Sbjct: 320 PGHGPE 325


>sp|COFG_METS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PGEGPEAR 8
PG+ PE R
Sbjct: 157 PGKNPEIR 164


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 PGEGPE 6
PG GPE
Sbjct: 320 PGHGPE 325


>sp|RBLL_ARCFU|RIBULOSE bisphosphate carboxylase-like protein|Archaeoglobus fulgidus

Query: 1 PGEGPEAR 8
PGE PE R
Sbjct: 66 PGETPEVR 73


>sp|GATD_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina barkeri (strain Fusaro /

Query: 1 PGEGPE 6
PG GPE
Sbjct: 305 PGSGPE 310


>sp|DFX_METTH|DESULFOFERRODOXIN homolog|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PGEGPEARGP 10
PG+ PEA P
Sbjct: 95 PGDNPEAEFP 104


>sp|KORC_METTM|2-OXOGLUTARATE synthase subunit KorC|Methanothermobacter marburgensis (strain

Query: 4 GPEARG 9
GPEARG
Sbjct: 41 GPEARG 46


>sp|KORC_METTH|2-OXOGLUTARATE synthase subunit KorC|Methanothermobacter thermautotrophicus

Query: 4 GPEARG 9
GPEARG
Sbjct: 44 GPEARG 49


>sp|RUVB_METHJ|HOLLIDAY junction branch migration complex|Methanospirillum hungatei JF-1

Query: 2 GEGPEAR 8
GEGP AR
Sbjct: 137 GEGPSAR 143


>sp|KORC_ARCFU|2-OXOGLUTARATE synthase subunit KorC|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GPEARG 9
GPEARG
Sbjct: 42 GPEARG 47


>sp|RUVB_METB6|HOLLIDAY junction branch migration complex|Methanoregula boonei (strain DSM

Query: 2 GEGPEARG 9
GEGP AR
Sbjct: 137 GEGPSARS 144




68|Sequence|336|345|EARGPSLGED

>sp|RIBL_METPE|FAD synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 EARGPSL 7
E RGPSL
Sbjct: 136 ETRGPSL 142


>sp|RL3_SACS2|LARGE ribosomal subunit protein uL3|Saccharolobus solfataricus (strain

Query: 3 RGPSLG 8
RGPSLG
Sbjct: 254 RGPSLG 259


>sp|SYR_METLZ|ARGININE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 ARGPSLGED 10
R P LGED
Sbjct: 391 VRRPELGED 399


>sp|RL3_SACI6|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 3 RGPSLG 8
RGPSLG
Sbjct: 254 RGPSLG 259


>sp|RL3_SACI4|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 3 RGPSLG 8
RGPSLG
Sbjct: 254 RGPSLG 259


>sp|RL3_SACI7|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 3 RGPSLG 8
RGPSLG
Sbjct: 254 RGPSLG 259


>sp|RL3_SACI3|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 3 RGPSLG 8
RGPSLG
Sbjct: 254 RGPSLG 259


>sp|RL3_SACI2|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 3 RGPSLG 8
RGPSLG
Sbjct: 254 RGPSLG 259


>sp|RL3_SACI1|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 3 RGPSLG 8
RGPSLG
Sbjct: 254 RGPSLG 259


>sp|KAE1B_HALMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 ARGPSLG 8
ARGP LG
Sbjct: 90 ARGPGLG 96




69|Sequence|341|350|SLGEDTKEAD

>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 3 GEDTKEAD 10
GEDT EAD
Sbjct: 284 GEDTDEAD 291


>sp|CFBD_METTH|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanothermobacter

Query: 2 LGEDTKEA 9
+GED KEA
Sbjct: 91 IGEDLKEA 98


>sp|Y1659_METJA|UNCHARACTERIZED ATP-binding protein MJ1659|Methanocaldococcus jannaschii (strain

Query: 2 LGEDTKE 8
LGED KE
Sbjct: 264 LGEDVKE 270




70|Sequence|346|355|TKEADLPEPS

>sp|ATRMA_PYRHO|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 1 TKEADLPEPS 10
TKE LP+PS
Sbjct: 192 TKEGKLPDPS 201


>sp|ATRMA_PYRFU|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus furiosus (strain

Query: 1 TKEADLPEPS 10
TKE +LP+P+
Sbjct: 193 TKEGELPDPT 202


>sp|ATRMA_PYRAB|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 TKEADLPEPS 10
TKE +LP+P+
Sbjct: 192 TKEGNLPDPT 201


>sp|BACR_HALSA|BACTERIORHODOPSIN salinarum (strain ATCC 700922

Query: 3 EADLPEPS 10
EA+ PEPS
Sbjct: 245 EAEAPEPS 252


>sp|SYR_NATPD|ARGININE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 EADLPEPS 10
E+DLPEP+
Sbjct: 179 ESDLPEPA 186


>sp|PT1_HALVD|PHOSPHOENOLPYRUVATE-PROTEIN phosphotransferase|Haloferax volcanii (strain ATCC 29605

Query: 3 EADLPEP 9
+ADLPEP
Sbjct: 26 DADLPEP 32


>sp|TRPB1_AERPE|TRYPTOPHAN synthase beta chain 1|Aeropyrum pernix (strain ATCC 700893

Query: 4 ADLPEP 9
ADLPEP
Sbjct: 13 ADLPEP 18


>sp|GATD_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina acetivorans (strain

Query: 1 TKEADLPEPS 10
T E +LPEP
Sbjct: 71 TNEEELPEPG 80


>sp|RS2_HYPBU|SMALL ribosomal subunit protein uS2|Hyperthermus butylicus (strain DSM

Query: 2 KEADLPEP 9
++ DLPEP
Sbjct: 198 QDQDLPEP 205


>sp|MUTL_METLZ|DNA mismatch repair protein MutL|Methanocorpusculum labreanum (strain

Query: 1 TKEADLPE 8
T+ ADLPE
Sbjct: 389 TESADLPE 396


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 1 TKEADLPEPS 10
T EA+L EP+
Sbjct: 453 TNEAELKEPT 462




71|Sequence|351|360|LPEPSEKQPA

>sp|GLMM_METJA|PHOSPHOGLUCOSAMINE mutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LPEPSEK 7
LPEP EK
Sbjct: 201 LPEPDEK 207


>sp|GLMM_METM5|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C5 /

Query: 1 LPEPSEK 7
+PEP+EK
Sbjct: 200 MPEPNEK 206


>sp|GLMM_METVS|PHOSPHOGLUCOSAMINE mutase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LPEPSEK 7
+PEP+EK
Sbjct: 200 MPEPNEK 206


>sp|GLMM_META3|PHOSPHOGLUCOSAMINE mutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 PEPSEK 7
PEP+EK
Sbjct: 202 PEPNEK 207


>sp|SYC_PYRAE|CYSTEINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PEPSEKQP 9
PEP +K P
Sbjct: 177 PEPGKKNP 184


>sp|IMDH_PYRFU|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LPEPSEKQP 9
+P+P+E +P
Sbjct: 23 IPQPTEVEP 31


>sp|EF2_METB6|ELONGATION factor 2|Methanoregula boonei (strain DSM 21154

Query: 1 LPEPSEKQP 9
LP P E QP
Sbjct: 256 LPNPLEAQP 264


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 LPEPSEKQPA 10
LPE + K+PA
Sbjct: 66 LPETTGKEPA 75


>sp|PELO_METPE|PROTEIN pelota homolog|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 PEPSEKQP 9
PE +EK+P
Sbjct: 55 PEKAEKRP 62


>sp|GATE_CALMQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Caldivirga maquilingensis (strain ATCC

Query: 1 LPEPSEKQ 8
+PEP +KQ
Sbjct: 453 VPEPIDKQ 460




72|Sequence|356|365|EKQPAAAPRG

>sp|DYRB_HALVO|DIHYDROFOLATE reductase HdrB|Haloferax volcanii (Halobacterium volcanii)

Query: 2 KQPAAAPRG 10
KQPAAA RG
Sbjct: 180 KQPAAADRG 188


>sp|RL5_META3|LARGE ribosomal subunit protein uL5|Methanococcus aeolicus (strain ATCC

Query: 1 EKQPAAAPR 9
EKQP + PR
Sbjct: 8 EKQPMSKPR 16


>sp|Y2322_SULTO|UPF0282 protein STK_23220|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EKQPAAAPRG 10
E +PA PRG
Sbjct: 289 ENKPARIPRG 298


>sp|GYAR_THELN|GLYOXYLATE reductase|Thermococcus litoralis (strain ATCC 51850

Query: 2 KQPAAAPRG 10
K P A PRG
Sbjct: 29 KDPKAPPRG 37


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 EKQPAAAPR 9
EK P A PR
Sbjct: 901 EKVPVAEPR 909


>sp|TRUD_HALSA|PROBABLE tRNA pseudouridine synthase D|Halobacterium salinarum (strain

Query: 1 EKQPAAAPRG 10
+ QPA AP G
Sbjct: 43 DTQPADAPTG 52


>sp|TRUD_HALS3|PROBABLE tRNA pseudouridine synthase D|Halobacterium salinarum (strain

Query: 1 EKQPAAAPRG 10
+ QPA AP G
Sbjct: 43 DTQPADAPTG 52


>sp|Y3251_SACS2|UPF0282 protein SSO3251|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EKQPAAAPRG 10
+ +PA PRG
Sbjct: 289 DNRPAKIPRG 298


>sp|Y2122_SACI6|UPF0282 protein M164_2122|Saccharolobus islandicus (strain M.16.4 /

Query: 1 EKQPAAAPRG 10
+ +PA PRG
Sbjct: 289 DNRPAKIPRG 298




73|Sequence|361|370|AAPRGKPVSR

>sp|CAS1_KORCO|CRISPR-ASSOCIATED endonuclease Cas1|Korarchaeum cryptofilum (strain OPF8)

Query: 1 AAPRGKPVSR 10
A P G+PV+R
Sbjct: 70 ATPTGRPVAR 79


>sp|RS4E_METAR|SMALL ribosomal subunit protein eS4|Methanocella arvoryzae (strain DSM

Query: 1 AAPRGKPVSR 10
AAPR P++R
Sbjct: 10 AAPRTWPITR 19


>sp|SURE_METS3|5'-NUCLEOTIDASE SurE|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 PRGKP 7
PRGKP
Sbjct: 206 PRGKP 210


>sp|PXPA_PYRAB|5-OXOPROLINASE subunit A|Pyrococcus abyssi (strain GE5 /

Query: 3 PRGKP 7
PRGKP
Sbjct: 178 PRGKP 182


>sp|Y1640_METAR|UPF0597 protein UNCMA_16400|Methanocella arvoryzae (strain DSM 22066

Query: 1 AAPRGKPV 8
++PRG PV
Sbjct: 158 SSPRGMPV 165


>sp|Y137_METJA|UNCHARACTERIZED protein MJ0137|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AAPRGKPV 8
AAP+ KP+
Sbjct: 90 AAPKDKPI 97


>sp|SURE_METHJ|5'-NUCLEOTIDASE SurE|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PRGKP 7
PRGKP
Sbjct: 224 PRGKP 228


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PRGKP 7
PRGKP
Sbjct: 410 PRGKP 414


>sp|GATE_PYRAR|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum arsenaticum (strain DSM

Query: 1 AAPRGKP 7
AAPRG P
Sbjct: 395 AAPRGVP 401


>sp|DPO4_HALSA|DNA polymerase IV|Halobacterium salinarum (strain ATCC 700922

Query: 3 PRGKPVS 9
PRGKP S
Sbjct: 262 PRGKPKS 268


>sp|DPO4_HALS3|DNA polymerase IV|Halobacterium salinarum (strain ATCC 29341

Query: 3 PRGKPVS 9
PRGKP S
Sbjct: 262 PRGKPKS 268




74|Sequence|366|375|KPVSRVPQLK

>sp|Y2000_PYRAB|UNCHARACTERIZED protein Orf2|Pyrococcus abyssi (strain GE5 /

Query: 2 PVSRVPQ 8
P+SR+PQ
Sbjct: 73 PISRLPQ 79


>sp|EF1A_METBU|ELONGATION factor 1-alpha|Methanococcoides burtonii (strain DSM 6242

Query: 1 KPVSRVPQL 9
+PVS +PQL
Sbjct: 390 EPVSEIPQL 398


>sp|DOXD_ACIAM|THIOSULFATE dehydrogenase [quinone] large subunit|Acidianus ambivalens

Query: 1 KPVSRVPQLK 10
+P++ VP LK
Sbjct: 170 RPIANVPILK 179


>sp|AROE_ARCFU|SHIKIMATE dehydrogenase (NADP(+))|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PVSRVPQLK 10
P+SRV +LK
Sbjct: 166 PLSRVEELK 174


>sp|DPO42_METMA|DNA polymerase IV 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PVSRVP 7
PVSR+P
Sbjct: 193 PVSRIP 198




75|Sequence|371|380|VPQLKARMVS

>sp|RL15E_PICTO|LARGE ribosomal subunit protein eL15|Picrophilus torridus (strain ATCC

Query: 2 PQLKARMVS 10
P KARMVS
Sbjct: 22 PVQKARMVS 30




76|Sequence|376|385|ARMVSKSKDG

>sp|RL1_CENSY|LARGE ribosomal subunit protein uL1|Cenarchaeum symbiosum (strain A)

Query: 1 ARMVSKSKDG 10
ARM+ K+K+G
Sbjct: 8 ARMIKKAKEG 17


>sp|MTNA_SULAC|PUTATIVE methylthioribose-1-phosphate isomerase|Sulfolobus acidocaldarius

Query: 1 ARMVSKSKD 9
+RM++K+KD
Sbjct: 117 SRMLNKAKD 125




77|Sequence|381|390|KSKDGTGSDD

>sp|MTAP_NITMS|S-METHYL-5'-THIOADENOSINE phosphorylase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 KSKDGTGSDD 10
KS+DG+ S+D
Sbjct: 113 KSRDGSFSED 122


>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 1 KSKDGTG 7
KSKDG G
Sbjct: 12 KSKDGLG 18


>sp|CHEB_HALMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Haloarcula marismortui

Query: 2 SKDGTGSD 9
S+ GTGSD
Sbjct: 140 SRSGTGSD 147




78|Sequence|386|395|TGSDDKKAKT

>sp|SPSS1_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanococcoides burtonii (strain DSM 6242

Query: 1 TGSDDKKAKT 10
TGS DK AKT
Sbjct: 391 TGSFDKVAKT 400




79|Sequence|391|400|KKAKTSTRSS

***** No hits found ******


80|Sequence|396|405|STRSSAKTLK

>sp|GLMM_THEGJ|PROBABLE phosphoglucosamine mutase|Thermococcus gammatolerans (strain DSM

Query: 2 TRSSAKTLK 10
TR+S++TLK
Sbjct: 45 TRTSSETLK 53




81|Sequence|401|410|AKTLKNRPCL

>sp|UVRC_HALWD|UVRABC system protein C|Haloquadratum walsbyi (strain DSM 16790

Query: 5 KNRPCL 10
+NRPCL
Sbjct: 157 RNRPCL 162


>sp|SYH_METVS|HISTIDINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 KTLKNRPC 9
K LKN PC
Sbjct: 411 KDLKNFPC 418


>sp|MPTD_METJA|DIHYDRONEOPTERIN aldolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KTLKNRPCL 10
+ +KN+PC+
Sbjct: 56 EAMKNQPCV 64


>sp|ATGT_METM6|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C6 /

Query: 2 KTLKNRPC 9
K LKN PC
Sbjct: 273 KDLKNFPC 280


>sp|FTHS_METLZ|FORMATE--TETRAHYDROFOLATE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 KTLKNRPCL 10
+TL+N PC
Sbjct: 263 QTLENTPCF 271


>sp|ATGT_METVS|TRNA-GUANINE(15) transglycosylase|Methanococcus vannielii (strain ATCC 35089

Query: 2 KTLKNRPC 9
K LKN PC
Sbjct: 273 KDLKNFPC 280


>sp|Y048_ARCFU|UNCHARACTERIZED protein AF_0048|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KTLKNRP 8
KTLKN P
Sbjct: 360 KTLKNLP 366


>sp|BIOW_METVM|6-CARBOXYHEXANOATE--COA ligase|Methanocaldococcus vulcanius (strain ATCC 700851

Query: 2 KTLKNRPCL 10
+ L+N+PC+
Sbjct: 223 EKLENKPCI 231




82|Sequence|406|415|NRPCLSPKHP

>sp|DP2S_METJA|DNA polymerase II small subunit|Methanocaldococcus jannaschii (strain

Query: 2 RPCLSPKHP 10
RP L PK P
Sbjct: 308 RPALPPKEP 316


>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RPCLSPKHP 10
RP +P HP
Sbjct: 361 RPVTNPYHP 369


>sp|DCDB_METTH|DCTP deaminase, dUMP-forming|Methanothermobacter thermautotrophicus

Query: 2 RPCLSPKHP 10
+PC+ PK P
Sbjct: 51 KPCIDPKDP 59


>sp|UVRC_HALWD|UVRABC system protein C|Haloquadratum walsbyi (strain DSM 16790

Query: 1 NRPCL 5
NRPCL
Sbjct: 158 NRPCL 162


>sp|QUEC_ARCFU|7-CYANO-7-DEAZAGUANINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NRPCLS 6
+RPCLS
Sbjct: 189 DRPCLS 194


>sp|CAPPA_METTH|PHOSPHOENOLPYRUVATE carboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 CLSPKHP 10
C+S +HP
Sbjct: 6 CMSTQHP 12


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 3 PCLSPKHP 10
PC S HP
Sbjct: 524 PCPSEDHP 531


>sp|3MGH_METAR|PUTATIVE 3-methyladenine DNA glycosylase|Methanocella arvoryzae (strain DSM

Query: 1 NRPCLSPKHP 10
N PC+S + P
Sbjct: 188 NSPCVSKRAP 197




83|Sequence|411|420|SPKHPTPGSS

>sp|APGM2_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PKHPTP 7
P HPTP
Sbjct: 324 PDHPTP 329


>sp|UPPS_PICTO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Picrophilus

Query: 3 KHPTPG 8
KHP PG
Sbjct: 22 KHPVPG 27


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PKHPTP 7
P+HP P
Sbjct: 742 PEHPNP 747


>sp|APGM2_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanothermobacter thermautotrophicus

Query: 2 PKHPTP 7
P HPTP
Sbjct: 338 PDHPTP 343


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PKHPTP 7
P+HP P
Sbjct: 250 PRHPNP 255


>sp|PUR5_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 SPKHPTPGSS 10
SP+ PGSS
Sbjct: 198 SPEDEMPGSS 207


>sp|APGM_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM 6242

Query: 2 PKHPTP 7
P HPTP
Sbjct: 338 PDHPTP 343


>sp|AOCD_METKA|ORNITHINE cyclodeaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 SPKHPTP 7
SP+ PTP
Sbjct: 179 SPEKPTP 185


>sp|APGM_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PKHPTPGS 9
P HPTP S
Sbjct: 338 PDHPTPIS 345


>sp|RPO12_METKA|DNA-DIRECTED RNA polymerase subunit Rpo12|Methanopyrus kandleri (strain AV19 /

Query: 2 PKHPTP 7
P+HP P
Sbjct: 40 PRHPVP 45


>sp|APGM_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PKHPTPGS 9
P HPTP S
Sbjct: 338 PDHPTPIS 345


>sp|APGM_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina acetivorans (strain ATCC

Query: 2 PKHPTPGS 9
P HPTP S
Sbjct: 338 PDHPTPIS 345


>sp|APGM_METTP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanothrix thermoacetophila (strain DSM

Query: 2 PKHPTP 7
P HPTP
Sbjct: 334 PDHPTP 339


>sp|PURL_HALSA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 700922

Query: 3 KHPTPGS 9
+HP PGS
Sbjct: 540 QHPVPGS 546


>sp|PURL_HALS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 29341

Query: 3 KHPTPGS 9
+HP PGS
Sbjct: 540 QHPVPGS 546


>sp|SYE_HYPBU|GLUTAMATE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 PKHPTP 7
P+HP P
Sbjct: 241 PRHPDP 246




84|Sequence|416|425|TPGSSDPLIQ

>sp|BGAL_SACS2|BETA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 1 TPGSSDP 7
TPGS DP
Sbjct: 23 TPGSEDP 29


>sp|BGAL_SACSH|BETA-GALACTOSIDASE shibatae (strain ATCC 51178

Query: 1 TPGSSDP 7
TPGS DP
Sbjct: 23 TPGSEDP 29


>sp|BGAL_SULAC|BETA-GALACTOSIDASE acidocaldarius (strain ATCC 33909

Query: 1 TPGSSDP 7
TPGS DP
Sbjct: 23 TPGSEDP 29


>sp|ACDE1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Archaeoglobus

Query: 1 TPGSSDPLIQ 10
T GSS PLI+
Sbjct: 78 TAGSSKPLIE 87


>sp|PGK2_THEKO|2-PHOSPHOGLYCERATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PGSSDPLI 9
P +SDPLI
Sbjct: 155 PKNSDPLI 162


>sp|SRP54_HYPBU|SIGNAL recognition particle 54 kDa|Hyperthermus butylicus (strain DSM 5456

Query: 2 PGSSDPL 8
PGS DP+
Sbjct: 160 PGSKDPV 166


>sp|GLPA2_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A2|Haloferax volcanii

Query: 2 PGSSDP 7
PGS+DP
Sbjct: 389 PGSADP 394


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TPGSSDPLIQ 10
TPG+ P+I+
Sbjct: 794 TPGAEYPIIE 803


>sp|RPO11_METAR|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanocella arvoryzae (strain DSM

Query: 2 PGSSDPLI 9
PG SDP++
Sbjct: 48 PGISDPVL 55


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PGSSDPLIQ 10
PG DPL++
Sbjct: 118 PGRYDPLVK 126


>sp|DAPAL_HALSA|UNCHARACTERIZED DapA-like lyase VNG_0444G|Halobacterium salinarum (strain ATCC

Query: 2 PGSSDPL 8
PGS DPL
Sbjct: 8 PGSGDPL 14


>sp|DAPAL_HALS3|UNCHARACTERIZED DapA-like lyase OE_1665R|Halobacterium salinarum (strain ATCC

Query: 2 PGSSDPL 8
PGS DPL
Sbjct: 8 PGSGDPL 14


>sp|CBIX_HALSA|PROBABLE sirohydrochlorin cobaltochelatase|Halobacterium salinarum (strain

Query: 2 PGSSDP 7
PGSS+P
Sbjct: 15 PGSSEP 20




85|Sequence|421|430|DPLIQPSSPA

>sp|RPO3_METMA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina mazei (strain ATCC

Query: 1 DPLIQPSSP 9
DP IQP+ P
Sbjct: 116 DPKIQPADP 124


>sp|RPO3_METAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina acetivorans (strain ATCC

Query: 1 DPLIQPSSP 9
DP IQP+ P
Sbjct: 116 DPKIQPADP 124


>sp|FILI_METH6|METHANOGENESIS regulatory histidine kinase FilI|Methanothrix harundinacea (strain

Query: 1 DPLIQPSSP 9
DPLI SSP
Sbjct: 138 DPLIAHSSP 146


>sp|AOR_PYRHO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus horikoshii (strain

Query: 1 DPLIQPSSP 9
DP I P SP
Sbjct: 47 DPKIDPFSP 55


>sp|HIS3_NITMS|PHOSPHORIBOSYL-AMP cyclohydrolase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 LIQPSSPA 10
L++PS PA
Sbjct: 87 LVEPSGPA 94


>sp|HIS3_CENSY|PHOSPHORIBOSYL-AMP cyclohydrolase|Cenarchaeum symbiosum (strain A)

Query: 3 LIQPSSPA 10
L++PS PA
Sbjct: 87 LVEPSGPA 94


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 2 PLIQPSSP 9
PL++PS+P
Sbjct: 141 PLLEPSNP 148


>sp|ACDD2_METTE|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 1 DPLIQPSSP 9
DPLI+ +SP
Sbjct: 203 DPLIKDTSP 211


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain ATCC

Query: 2 PLIQPSSP 9
P+++PSSP
Sbjct: 143 PVLEPSSP 150


>sp|NADK_HALSA|NAD kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PLIQPSSPA 10
PL+QPS A
Sbjct: 192 PLVQPSVDA 200


>sp|NADK_HALS3|NAD kinase|Halobacterium salinarum (strain ATCC 29341

Query: 2 PLIQPSSPA 10
PL+QPS A
Sbjct: 192 PLVQPSVDA 200


>sp|Y397_ARCFU|UNCHARACTERIZED protein AF_0397|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DPLIQPSSPA 10
DP ++P PA
Sbjct: 53 DPKVEPMDPA 62


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter thermautotrophicus

Query: 2 PLIQPSSP 9
PL++PS P
Sbjct: 141 PLLEPSDP 148




86|Sequence|426|435|PSSPAVCPEP

>sp|CBID_METM5|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 PSSPAVCPEP 10
P PA+ P+P
Sbjct: 123 PGKPAINPKP 132


>sp|TRM1_METS3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanobrevibacter smithii

Query: 2 SSPAVCPE 9
S+P +CPE
Sbjct: 263 STPDICPE 270


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 1 PSSPAVCPE 9
PSSPA PE
Sbjct: 141 PSSPAKSPE 149


>sp|Y748_ARCFU|UNCHARACTERIZED protein AF_0748|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SPAVCP 8
SPA+CP
Sbjct: 108 SPALCP 113


>sp|Y3016_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 4 PAVCPE 9
PA+CPE
Sbjct: 306 PALCPE 311


>sp|ELP3_METIM|TRNA uridine(34) acetyltransferase|Methanocaldococcus infernus (strain

Query: 2 SSPAVCP 8
+SPA CP
Sbjct: 85 TSPAKCP 91


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 PAVCP 8
PAVCP
Sbjct: 342 PAVCP 346


>sp|RS3_METBF|SMALL ribosomal subunit protein uS3|Methanosarcina barkeri (strain Fusaro

Query: 1 PSSPAVCPE 9
P +PAV PE
Sbjct: 233 PKTPAVAPE 241




87|Sequence|431|440|VCPEPPSSPK

>sp|Y452_METJA|UNCHARACTERIZED protein MJ0452|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CPEPPS 7
CPEPP+
Sbjct: 10 CPEPPA 15


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 3 PEPPSSP 9
P PPSSP
Sbjct: 138 PVPPSSP 144


>sp|ATGT_PYRAB|TRNA-GUANINE(15) transglycosylase|Pyrococcus abyssi (strain GE5 /

Query: 3 PEPPSSPK 10
P PP +PK
Sbjct: 132 PTPPDAPK 139


>sp|MUTS_METTP|DNA mismatch repair protein MutS|Methanothrix thermoacetophila (strain

Query: 4 EPPSSPK 10
+PP+SP+
Sbjct: 403 DPPTSPR 409


>sp|RL1_METS5|LARGE ribosomal subunit protein uL1|Metallosphaera sedula (strain ATCC

Query: 1 VCPEPPSSPK 10
V P+PPS P+
Sbjct: 53 VLPKPPSKPR 62


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 3 PEPPSSP 9
P PPS+P
Sbjct: 142 PVPPSTP 148


>sp|TF2B_PYRNV|TRANSCRIPTION initiation factor IIB|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 PEPPSSPK 10
P PPSS K
Sbjct: 4 PNPPSSGK 11


>sp|LONB_THEVO|ARCHAEAL Lon protease|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PEPPSSPK 10
PE P+ PK
Sbjct: 88 PEDPNKPK 95


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PEPPS 7
PEPPS
Sbjct: 267 PEPPS 271


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 3 PEPPSSP 9
P+P SSP
Sbjct: 265 PDPSSSP 271


>sp|PRIL_PYRFU|DNA primase large subunit PriL|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VCPEPP 6
+CP PP
Sbjct: 261 ICPNPP 266


>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PEPPSSPK 10
PE P+ PK
Sbjct: 88 PEDPNKPK 95


>sp|PRIL_PYRAB|DNA primase large subunit PriL|Pyrococcus abyssi (strain GE5 /

Query: 1 VCPEPP 6
+CP PP
Sbjct: 260 ICPNPP 265


>sp|PRIL_PYRHO|DNA primase large subunit PriL|Pyrococcus horikoshii (strain ATCC

Query: 1 VCPEPP 6
+CP PP
Sbjct: 261 ICPNPP 266




88|Sequence|436|445|PSSPKYVSSV

>sp|HIS2_METMJ|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PSSPKYVSSV 10
PS+ YVSSV
Sbjct: 21 PSAGSYVSSV 30


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PSSPKYVSSV 10
PS PK+ ++V
Sbjct: 24 PSKPKFFTTV 33


>sp|SYT_NANEQ|THREONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PSSPKYVSSV 10
PSSPK V
Sbjct: 86 PSSPKLAKEV 95




89|Sequence|441|450|YVSSVTSRTG

>sp|PELO_THEKO|PROTEIN pelota homolog|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 SSVTSRTG 10
+SVT RTG
Sbjct: 234 TSVTGRTG 241


>sp|PELO_THEGJ|PROTEIN pelota homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 3 SSVTSRTG 10
+SVT RTG
Sbjct: 234 TSVTGRTG 241


>sp|PELO_THEON|PROTEIN pelota homolog|Thermococcus onnurineus (strain NA1)

Query: 3 SSVTSRTG 10
+SVT RTG
Sbjct: 234 TSVTGRTG 241


>sp|Y4098_METAC|UPF0292 protein MA_4098|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YVSSVTSRTG 10
YVS + S+TG
Sbjct: 126 YVSKLRSKTG 135




90|Sequence|446|455|TSRTGSSGAK

>sp|AROD_METMA|3-DEHYDROQUINATE dehydratase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TSRTGSSGAK 10
TSR+G+ G K
Sbjct: 71 TSRSGAEGGK 80




91|Sequence|451|460|SSGAKEMKLK

>sp|FLA1_PYRHO|PROBABLE flagellin PH0546|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SSGAKEMKLK 10
S+G KE+ LK
Sbjct: 100 SNGQKEVSLK 109


>sp|DNLI_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 2 SGAKEMKLK 10
SG++E KLK
Sbjct: 135 SGSEETKLK 143




92|Sequence|456|465|EMKLKGADGK

>sp|Y1255_METJA|UNCHARACTERIZED glycosyltransferase MJ1255|Methanocaldococcus jannaschii (strain

Query: 1 EMKLKGADGK 10
E+KLKG DGK
Sbjct: 56 EIKLKGKDGK 65


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 EMKLKGADGK 10
E+++KG +GK
Sbjct: 888 ELRVKGGEGK 897


>sp|Y3544_METJA|UNCHARACTERIZED protein MJECL44|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EMKLKGA 7
EM+LKGA
Sbjct: 299 EMELKGA 305


>sp|PYRI_CALMQ|ASPARTATE carbamoyltransferase regulatory chain|Caldivirga maquilingensis

Query: 2 MKLKGADGK 10
+KLKG +G+
Sbjct: 37 LKLKGGEGR 45


>sp|MSMJS_METJA|SMALL-CONDUCTANCE mechanosensitive channel MscMJ|Methanocaldococcus jannaschii

Query: 2 MKLKGADG 9
+K+KGA+G
Sbjct: 201 VKVKGAEG 208




93|Sequence|461|470|GADGKTKIAT

>sp|PUR7_SULAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 ADGKTKI 8
A+GKTKI
Sbjct: 7 AEGKTKI 13


>sp|DADD_METJA|5'-DEOXYADENOSINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DGKTKIA 9
DGK KIA
Sbjct: 41 DGKNKIA 47


>sp|Y1470_META3|UNCHARACTERIZED solute-binding protein Maeo_1470|Methanococcus aeolicus (strain

Query: 2 ADGKTKIA 9
DGKTK A
Sbjct: 280 GDGKTKTA 287


>sp|IF1A_METKA|TRANSLATION initiation factor 1A|Methanopyrus kandleri (strain AV19 /

Query: 3 DGKTKIA 9
DGKT++A
Sbjct: 40 DGKTRVA 46




94|Sequence|466|475|TKIATPRGAA

>sp|ILVC_NATPD|KETOL-ACID reductoisomerase (NADP(+))|Natronomonas pharaonis (strain ATCC

Query: 3 IATPRGAA 10
+ATPRGAA
Sbjct: 66 VATPRGAA 73


>sp|DPCKG_IGNH4|GTP-DEPENDENT dephospho-CoA kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 TKIATPRGA 9
T +A+PRGA
Sbjct: 3 TLLASPRGA 11


>sp|PNPH_ARCFU|PROBABLE 6-oxopurine nucleoside phosphorylase|Archaeoglobus fulgidus

Query: 1 TKIATPRGAA 10
T+I TP G A
Sbjct: 22 TRIETPYGTA 31




95|Sequence|471|480|PRGAAPPGQK

>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RGAAPPGQK 10
+G PPG+K
Sbjct: 693 QGGVPPGEK 701


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RGAAPPGQK 10
+G PPG+K
Sbjct: 693 QGGVPPGEK 701


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 RGAAPPGQK 10
+G PPG+K
Sbjct: 693 QGGVPPGEK 701


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RGAAPPGQK 10
+G PPG+K
Sbjct: 682 QGGVPPGRK 690


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 RGAAPPGQ 9
+G PPGQ
Sbjct: 696 QGGIPPGQ 703


>sp|MUTL_HALSA|DNA mismatch repair protein MutL|Halobacterium salinarum (strain ATCC

Query: 1 PRGAAPPGQ 9
PRGA+ PG
Sbjct: 340 PRGASKPGD 348


>sp|MUTL_HALS3|DNA mismatch repair protein MutL|Halobacterium salinarum (strain ATCC

Query: 1 PRGAAPPGQ 9
PRGA+ PG
Sbjct: 340 PRGASKPGD 348


>sp|ENO_HALLT|ENOLASE lacusprofundi (strain ATCC 49239

Query: 2 RGAAPPG 8
RGAAP G
Sbjct: 34 RGAAPSG 40


>sp|RL2_KORCO|LARGE ribosomal subunit protein uL2|Korarchaeum cryptofilum (strain OPF8)

Query: 4 AAPPGQK 10
APPGQK
Sbjct: 219 TAPPGQK 225


>sp|RL2_CALMQ|LARGE ribosomal subunit protein uL2|Caldivirga maquilingensis (strain

Query: 5 APPGQK 10
APPGQK
Sbjct: 221 APPGQK 226


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 4 AAPPGQK 10
A PPGQ+
Sbjct: 527 AVPPGQE 533


>sp|RL2_PYRAR|LARGE ribosomal subunit protein uL2|Pyrobaculum arsenaticum (strain DSM

Query: 4 AAPPGQK 10
APPGQK
Sbjct: 218 TAPPGQK 224


>sp|RL2_PYRIL|LARGE ribosomal subunit protein uL2|Pyrobaculum islandicum (strain DSM

Query: 4 AAPPGQK 10
APPGQK
Sbjct: 218 TAPPGQK 224


>sp|RL2_PYRAE|LARGE ribosomal subunit protein uL2|Pyrobaculum aerophilum (strain ATCC

Query: 4 AAPPGQK 10
APPGQK
Sbjct: 218 TAPPGQK 224


>sp|RL2_PYRNV|LARGE ribosomal subunit protein uL2|Pyrobaculum neutrophilum (strain DSM

Query: 4 AAPPGQK 10
APPGQK
Sbjct: 217 TAPPGQK 223


>sp|RL2_PYRCJ|LARGE ribosomal subunit protein uL2|Pyrobaculum calidifontis (strain DSM

Query: 4 AAPPGQK 10
APPGQK
Sbjct: 216 TAPPGQK 222




96|Sequence|476|485|PPGQKGQANA

>sp|RS8E_HALLT|SMALL ribosomal subunit protein eS8|Halorubrum lacusprofundi (strain ATCC

Query: 2 PGQKGQANA 10
PGQ GQ NA
Sbjct: 111 PGQTGQVNA 119


>sp|RS8E_HALMA|SMALL ribosomal subunit protein eS8|Haloarcula marismortui (strain ATCC

Query: 2 PGQKGQANA 10
PGQ GQ NA
Sbjct: 111 PGQHGQVNA 119


>sp|Y1628_METJA|UNCHARACTERIZED protein MJ1628|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PPGQKGQANA 10
PPG KG A
Sbjct: 315 PPGIKGSPKA 324


>sp|PDXS_HALMA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Haloarcula marismortui (strain

Query: 3 GQKGQANA 10
G KGQANA
Sbjct: 282 GMKGQANA 289


>sp|Y637_METTH|UPF0235 protein MTH_637|Methanothermobacter thermautotrophicus (strain

Query: 2 PGQKGQAN 9
P QKG+AN
Sbjct: 46 PPQKGKAN 53


>sp|RS8E_HALSA|SMALL ribosomal subunit protein eS8|Halobacterium salinarum (strain ATCC

Query: 2 PGQKGQANA 10
PGQ GQ NA
Sbjct: 111 PGQDGQVNA 119


>sp|RS8E_HALS3|SMALL ribosomal subunit protein eS8|Halobacterium salinarum (strain ATCC

Query: 2 PGQKGQANA 10
PGQ GQ NA
Sbjct: 111 PGQDGQVNA 119


>sp|RS8E_AERPE|SMALL ribosomal subunit protein eS8|Aeropyrum pernix (strain ATCC 700893

Query: 2 PGQKGQANA 10
PGQ+G NA
Sbjct: 118 PGQEGVVNA 126


>sp|RS8E_META3|SMALL ribosomal subunit protein eS8|Methanococcus aeolicus (strain ATCC

Query: 2 PGQKGQANA 10
PGQ G NA
Sbjct: 115 PGQSGIVNA 123




97|Sequence|481|490|GQANATRIPA

>sp|RS8E_HALSA|SMALL ribosomal subunit protein eS8|Halobacterium salinarum (strain ATCC

Query: 1 GQANATRI 8
GQ NATR+
Sbjct: 115 GQVNATRV 122


>sp|RS8E_HALS3|SMALL ribosomal subunit protein eS8|Halobacterium salinarum (strain ATCC

Query: 1 GQANATRI 8
GQ NATR+
Sbjct: 115 GQVNATRV 122


>sp|AMPD_ARCFU|ANHYDROMEVALONATE phosphate decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ANATRIPA 10
A+ATR+P+
Sbjct: 201 ASATRVPS 208


>sp|Y817_ARCFU|UNCHARACTERIZED protein AF_0817|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GQANATRIPA 10
G+A T IPA
Sbjct: 78 GEATPTAIPA 87


>sp|RS9_PICTO|SMALL ribosomal subunit protein uS9|Picrophilus torridus (strain ATCC

Query: 1 GQANATR 7
GQA+ATR
Sbjct: 73 GQADATR 79




98|Sequence|486|495|TRIPAKTPPA

>sp|Y1038_PYRHO|PROBABLE ABC transporter permease protein|Pyrococcus horikoshii (strain

Query: 2 RIPAKTPP 9
R P K+PP
Sbjct: 60 RFPTKSPP 67


>sp|DADD_METB6|5'-DEOXYADENOSINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 1 TRIPAKTP 8
TR PA TP
Sbjct: 377 TRTPANTP 384


>sp|RS17_HALWD|SMALL ribosomal subunit protein uS17|Haloquadratum walsbyi (strain DSM

Query: 1 TRIPAKTPPA 10
+RIPA PP
Sbjct: 66 SRIPAHAPPC 75


>sp|RS17_METKA|SMALL ribosomal subunit protein uS17|Methanopyrus kandleri (strain AV19

Query: 1 TRIPAKTPP 9
+RIPA PP
Sbjct: 74 SRIPAHNPP 82


>sp|PYLC_METAC|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TRIPAKTPPA 10
+R P++TP A
Sbjct: 242 SRFPSQTPTA 251


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 4 PAKTPPA 10
P K+PPA
Sbjct: 744 PTKSPPA 750




99|Sequence|491|500|KTPPAPKTPP

>sp|Y912_ARCFU|UNCHARACTERIZED protein AF_0912|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PAPKTPP 10
PAP TPP
Sbjct: 518 PAPATPP 524


>sp|RFCL_METLZ|REPLICATION factor C large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 KTPPAPKTPP 10
+ PP P+TPP
Sbjct: 441 QEPPVPETPP 450


>sp|XERA_PYRAB|TYROSINE recombinase XerA|Pyrococcus abyssi (strain GE5 /

Query: 1 KTPPAPKTPP 10
KTP PKT P
Sbjct: 93 KTPKMPKTLP 102


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 3 PPAPKTP 9
PP PK+P
Sbjct: 168 PPVPKSP 174


>sp|MTMB2_METAC|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina acetivorans (strain ATCC

Query: 3 PPAPKTP 9
PP PK+P
Sbjct: 168 PPVPKSP 174


>sp|TRUA_PYRFU|TRNA pseudouridine synthase A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KTPPAP 6
K PPAP
Sbjct: 207 KVPPAP 212


>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 1 KTPPAPKTP 9
K P +PK P
Sbjct: 196 KIPKSPKVP 204


>sp|SERA_ARCFU|D-3-PHOSPHOGLYCERATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KTPPAPKTP 9
K PP+P P
Sbjct: 258 KEPPSPDNP 266


>sp|TRUA_PYRAB|TRNA pseudouridine synthase A|Pyrococcus abyssi (strain GE5 /

Query: 1 KTPPAP 6
K PPAP
Sbjct: 207 KVPPAP 212


>sp|TRUA_PYRHO|TRNA pseudouridine synthase A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KTPPAP 6
K PPAP
Sbjct: 207 KVPPAP 212


>sp|NADB_HALSA|L-ASPARTATE oxidase|Halobacterium salinarum (strain ATCC 700922

Query: 4 PAPKTPP 10
PAP PP
Sbjct: 396 PAPSEPP 402


>sp|Y1408_METJA|UNCHARACTERIZED protein MJ1408|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KTPPAPKTP 9
KTPP K P
Sbjct: 71 KTPPVRKLP 79


>sp|TRPG_METJA|ANTHRANILATE synthase component 2|Methanocaldococcus jannaschii (strain ATCC

Query: 4 PAPKTP 9
P PKTP
Sbjct: 54 PGPKTP 59


>sp|Y964_METJA|UNCHARACTERIZED protein MJ0964|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KTPPAPKTP 9
K P PK+P
Sbjct: 32 KVPTTPKSP 40


>sp|TRUA_THEGJ|TRNA pseudouridine synthase A|Thermococcus gammatolerans (strain DSM

Query: 1 KTPPAP 6
K PPAP
Sbjct: 211 KVPPAP 216




100|Sequence|496|505|PKTPPSSGEP

>sp|TF2B_PYRAE|TRANSCRIPTION initiation factor IIB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PPSSGEP 10
PPSSG+P
Sbjct: 6 PPSSGKP 12


>sp|TF2B_PYRNV|TRANSCRIPTION initiation factor IIB|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 PPSSGEP 10
PPSSG+P
Sbjct: 6 PPSSGKP 12


>sp|HERA_SULTO|DNA double-strand break repair helicase|Sulfurisphaera tokodaii (strain

Query: 1 PKTPPSSGEP 10
P PP +G P
Sbjct: 93 PDLPPVAGTP 102


>sp|HERA_SULAC|DNA double-strand break repair helicase|Sulfolobus acidocaldarius

Query: 1 PKTPPSSGEP 10
P PP +G P
Sbjct: 94 PDLPPVAGTP 103


>sp|HERA_SACS2|DNA double-strand break repair helicase|Saccharolobus solfataricus

Query: 1 PKTPPSSGEP 10
P PP +G P
Sbjct: 93 PDIPPFAGTP 102


>sp|PSLS_METTH|PHOSPHOSULFOLACTATE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 TPPSSGEP 10
TPP SG+P
Sbjct: 8 TPPRSGKP 15


>sp|METXA_NATPD|HOMOSERINE O-acetyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PKTPPSSGEP 10
P T P +GEP
Sbjct: 101 PSTNPETGEP 110


>sp|FLAB5_PYRHO|FLAGELLIN B5|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PKTPPSSGE 9
P PP SG+
Sbjct: 64 PSNPPGSGK 72


>sp|FLAB2_THEKO|FLAGELLIN B2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PKTPPSSGE 9
P PP+SG+
Sbjct: 69 PADPPASGK 77


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KTPPSSGEP 10
K PP G+P
Sbjct: 411 KVPPYEGKP 419


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 KTPPSSGEP 10
K PP G+P
Sbjct: 411 KVPPYDGKP 419


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KTPPSSGEP 10
K PP G+P
Sbjct: 411 KIPPYEGKP 419


>sp|FLAB4_THEKO|FLAGELLIN B4|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 TPPSSG 8
TPPS+G
Sbjct: 67 TPPSNG 72


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 5 PSSGEP 10
PS+GEP
Sbjct: 370 PSTGEP 375


>sp|FLAB4_PYRHO|FLAGELLIN B4|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 TPPSSG 8
TPPS+G
Sbjct: 66 TPPSNG 71


>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 2 KTPPSSGE 9
+ PP SGE
Sbjct: 206 RAPPGSGE 213




101|Sequence|501|510|SSGEPPKSGD

>sp|XERA_SACS2|TYROSINE recombinase XerA|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GEPPKSGD 10
G PP+SGD
Sbjct: 6 GSPPESGD 13


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 1 SSGEPPKS 8
S+GEPPKS
Sbjct: 371 STGEPPKS 378


>sp|PFDA_NITMS|PREFOLDIN subunit alpha|Nitrosopumilus maritimus (strain SCM1)

Query: 2 SGEPPKSG 9
SG+PPKSG
Sbjct: 138 SGQPPKSG 145


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 1 SSGEPPKS 8
S+G+PP+S
Sbjct: 371 STGQPPES 378


>sp|MTRE_METBU|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcoides burtonii (strain

Query: 2 SGEPPKSG 9
SGEPP +
Sbjct: 58 SGEPPSNA 65


>sp|Y1005_METKA|PUTATIVE HTH-type transcriptional regulatory protein|Methanopyrus kandleri

Query: 3 GEPPKS 8
GEPPK+
Sbjct: 107 GEPPKA 112


>sp|LEUC_METAC|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina

Query: 1 SSGEPPKSGD 10
+SG P K+GD
Sbjct: 11 ASGTPVKAGD 20


>sp|LEUC_METMA|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina mazei

Query: 1 SSGEPPKSGD 10
+SG P K+GD
Sbjct: 11 ASGTPVKAGD 20


>sp|RS3_PICTO|SMALL ribosomal subunit protein uS3|Picrophilus torridus (strain ATCC

Query: 2 SGEPPKSG 9
SGEP +SG
Sbjct: 153 SGEPARSG 160


>sp|MTRE_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanosarcina barkeri (strain

Query: 2 SGEPPKSG 9
SGEPP +
Sbjct: 58 SGEPPSNA 65


>sp|NADC_ARCFU|PROBABLE nicotinate-nucleotide pyrophosphorylase

Query: 3 GEPPKSGD 10
GEP K GD
Sbjct: 50 GEPIKPGD 57


>sp|FEN_METJA|FLAP endonuclease 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GEPPK 7
GEPPK
Sbjct: 81 GEPPK 85


>sp|MTRE_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanosarcina acetivorans (strain

Query: 2 SGEPPKSG 9
SGEPP +
Sbjct: 58 SGEPPSNA 65


>sp|METXA_METBU|HOMOSERINE O-acetyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 3 GEPPKSG 9
GEPP +G
Sbjct: 211 GEPPVNG 217


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 SSGEPPKSGD 10
+SG+PP S D
Sbjct: 219 NSGKPPVSID 228


>sp|MTRE_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanosarcina mazei (strain ATCC

Query: 2 SGEPPKSG 9
SGEPP +
Sbjct: 58 SGEPPSNA 65


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 3 GEPPKSGD 10
G P K+GD
Sbjct: 567 GRPEKAGD 574


>sp|AMPPA_METBU|AMP phosphorylase|Methanococcoides burtonii (strain DSM 6242

Query: 3 GEPPKSGD 10
GEP K GD
Sbjct: 457 GEPLKEGD 464




102|Sequence|506|515|PKSGDRSGYS

>sp|SYFA_AERPE|PHENYLALANINE--TRNA ligase alpha subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 PKSGDRSGYS 10
P+ GD SGYS
Sbjct: 290 PRRGDLSGYS 299


>sp|KVAP_AERPE|VOLTAGE-GATED potassium channel|Aeropyrum pernix (strain ATCC 700893

Query: 2 KSGDRSGY 9
KSGD +GY
Sbjct: 92 KSGDPAGY 99


>sp|AROD_METHJ|3-DEHYDROQUINATE dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 KSGDRSGY 9
+SGD SGY
Sbjct: 236 RSGDASGY 243


>sp|NURA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 2 KSGDRSGYS 10
K D+SGYS
Sbjct: 258 KYTDKSGYS 266


>sp|PATS_METJA|SOLUBLE P-type ATPase-like phosphatase|Methanocaldococcus jannaschii

Query: 3 SGDRSGY 9
SGDR G+
Sbjct: 161 SGDRKGF 167


>sp|HEM2_ARCFU|DELTA-AMINOLEVULINIC acid dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KSGDRSGY 9
K GDR GY
Sbjct: 213 KFGDRRGY 220


>sp|PDAD_NITMS|PYRUVOYL-DEPENDENT arginine decarboxylase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 PKSGDRSGY 9
PK DR GY
Sbjct: 93 PKDKDRYGY 101


>sp|T1214_ARCFU|PROBABLE transposase for insertion sequence|Archaeoglobus fulgidus (strain

Query: 3 SGDRSGYS 10
SGD +GYS
Sbjct: 149 SGDGTGYS 156


>sp|QUEC_METLZ|7-CYANO-7-DEAZAGUANINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 KSGDRSGY 9
+SGD +GY
Sbjct: 125 QSGDHTGY 132


>sp|Y1590_CALMQ|MEMO1 family protein Cmaq_1590|Caldivirga maquilingensis (strain ATCC

Query: 3 SGDRSGY 9
SGD SGY
Sbjct: 262 SGDTSGY 268


>sp|TDXH_METVS|PEROXIREDOXIN vannielii (strain ATCC 35089

Query: 2 KSGDRSGY 9
K GD SGY
Sbjct: 199 KRGDISGY 206


>sp|TYSY_METTH|PUTATIVE thymidylate synthase|Methanothermobacter thermautotrophicus

Query: 3 SGDRSGY 9
SGDR G+
Sbjct: 89 SGDRKGF 95


>sp|Y1105_PYRIL|MEMO1 family protein Pisl_1105|Pyrobaculum islandicum (strain DSM 4184

Query: 3 SGDRSGY 9
SGD SGY
Sbjct: 261 SGDTSGY 267


>sp|Y062_PYRAR|MEMO1 family protein Pars_0062|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 SGDRSGY 9
SGD SGY
Sbjct: 261 SGDTSGY 267


>sp|GGR_METTP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 KSGDRSGY 9
KSGD GY
Sbjct: 86 KSGDEVGY 93


>sp|Y818_PYRAE|MEMO1 family protein PAE0818|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 SGDRSGY 9
SGD SGY
Sbjct: 261 SGDTSGY 267


>sp|Y028_PYRCJ|MEMO1 family protein Pcal_0028|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 SGDRSGY 9
SGD SGY
Sbjct: 261 SGDTSGY 267




103|Sequence|511|520|RSGYSSPGSP

>sp|SYY_ARCFU|TYROSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RSGYSSP 7
R GYSSP
Sbjct: 193 RLGYSSP 199


>sp|OGG1_ARCFU|8-OXOGUANINE DNA glycosylase/AP lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RSGYSSPGS 9
R GY PG+
Sbjct: 149 RQGYEVPGT 157


>sp|PRIS_METPE|DNA primase small subunit PriS|Methanosphaerula palustris (strain

Query: 4 YSSPGSP 10
Y SPG+P
Sbjct: 77 YESPGAP 83


>sp|NURA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 1 RSGYSSP 7
+SGYS P
Sbjct: 262 KSGYSEP 268


>sp|PYRDB_THEAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Thermoplasma acidophilum

Query: 1 RSGYSSP 7
R+GYS+P
Sbjct: 52 RNGYSAP 58


>sp|RNZ_PYRFU|RIBONUCLEASE Z|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RSGYSSPG 8
+SGY +PG
Sbjct: 103 KSGYFAPG 110


>sp|Y1094_HALWD|PUTATIVE heme-binding protein HQ_1094A|Haloquadratum walsbyi (strain DSM

Query: 2 SGYSSPG 8
SGY++PG
Sbjct: 111 SGYTTPG 117




104|Sequence|516|525|SPGSPGTPGS

>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 SPGSPGTPG 9
SP PG PG
Sbjct: 193 SPWGPGRPG 201


>sp|SYC_THEAC|CYSTEINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SPGSPGTPG 9
SP PG PG
Sbjct: 194 SPWGPGRPG 202


>sp|DNLI_METB6|DNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 PGSPGTPG 9
P SP TPG
Sbjct: 396 PASPYTPG 403


>sp|SYC_PYRNV|CYSTEINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 SPGSPGTPG 9
SP PG PG
Sbjct: 200 SPWCPGRPG 208


>sp|SYC_PYRIL|CYSTEINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 SPGSPGTPG 9
SP PG PG
Sbjct: 200 SPWCPGRPG 208


>sp|SYC_PYRCJ|CYSTEINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 SPGSPGTPG 9
SP PG PG
Sbjct: 200 SPWCPGRPG 208


>sp|SYC_PYRAR|CYSTEINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 SPGSPGTPG 9
SP PG PG
Sbjct: 200 SPWCPGRPG 208


>sp|SYC_PYRAE|CYSTEINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SPGSPGTPG 9
SP PG PG
Sbjct: 202 SPWCPGRPG 210


>sp|Y1062_PYRAB|UNCHARACTERIZED protein PYRAB10620|Pyrococcus abyssi (strain GE5 /

Query: 2 PGSPGTPGS 10
PGSPG GS
Sbjct: 18 PGSPGYRGS 26


>sp|GSA_THEVO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SPGSPGTP 8
SP SPG P
Sbjct: 158 SPSSPGIP 165


Query: 3 GSPGTPG 9
GSP +PG
Sbjct: 157 GSPSSPG 163


>sp|GSA_METM6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C6 /

Query: 1 SPGSPGTP 8
+P SPG P
Sbjct: 165 APNSPGIP 172


>sp|GSA_METM7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C7 /

Query: 1 SPGSPGTP 8
+P SPG P
Sbjct: 165 APNSPGIP 172


>sp|GSA_METM5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C5 /

Query: 1 SPGSPGTP 8
+P SPG P
Sbjct: 165 APNSPGIP 172


>sp|GSA_METJA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PGSPGTP 8
P SPG P
Sbjct: 164 PNSPGIP 170


>sp|Y1209_PYRHO|UNCHARACTERIZED protein PH1209|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PGSPGTPG 9
PGSPG G
Sbjct: 18 PGSPGYKG 25


Query: 2 PGSPGTPG 9
P PG+PG
Sbjct: 15 PPLPGSPG 22


>sp|GSA_META3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 SPGSPGTP 8
+P SPG P
Sbjct: 168 APNSPGIP 175


>sp|GSA_METMP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SPGSPGTP 8
+P SPG P
Sbjct: 165 APNSPGIP 172


>sp|PYCA_METJA|PYRUVATE carboxylase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SPGSPG 6
SPG PG
Sbjct: 359 SPGGPG 364


>sp|GSA_METVS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus vannielii (strain ATCC 35089

Query: 1 SPGSPGTP 8
+P SPG P
Sbjct: 165 APNSPGIP 172


>sp|RTCB_ARCFU|TRNA-SPLICING ligase RtcB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PGSPGTP 8
PGS GTP
Sbjct: 379 PGSMGTP 385


>sp|DNAJ_HALSA|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 700922

Query: 1 SPGSPGTP 8
+PG PG P
Sbjct: 258 APGEPGAP 265


Query: 3 GSPGTPGS 10
G+PG PG+
Sbjct: 257 GAPGEPGA 264


>sp|DNAJ_HALS3|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 29341

Query: 1 SPGSPGTP 8
+PG PG P
Sbjct: 258 APGEPGAP 265


Query: 3 GSPGTPGS 10
G+PG PG+
Sbjct: 257 GAPGEPGA 264


>sp|GSA_HALMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloarcula marismortui (strain ATCC 43049

Query: 1 SPGSPGTPGS 10
+P SPG P S
Sbjct: 159 APSSPGIPES 168


>sp|GSA_THEAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SPGSPGTP 8
SP SPG P
Sbjct: 158 SPSSPGVP 165


>sp|GATD_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Aeropyrum pernix (strain ATCC 700893

Query: 5 PGTPGS 10
PGTPG+
Sbjct: 55 PGTPGA 60




105|Sequence|521|530|GTPGSRSRTP

>sp|TRPA_THEKO|TRYPTOPHAN synthase alpha chain|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GTPGSRSRTP 10
GT G+R R P
Sbjct: 167 GTTGARDRLP 176


>sp|Y4097_METAC|UPF0235 protein MA_4097|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TPGSRS 7
TPGSRS
Sbjct: 25 TPGSRS 30


>sp|Y822_METMA|UPF0235 protein MM_0822|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TPGSRS 7
TPGSRS
Sbjct: 24 TPGSRS 29




106|Sequence|526|535|RSRTPSLPTP

>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 2 SRTPSLP 8
SR+PSLP
Sbjct: 2 SRSPSLP 8


>sp|LYSM_SACS2|HTH-TYPE transcriptional regulator LysM|Saccharolobus solfataricus (strain

Query: 4 TPSLPTP 10
TP +PTP
Sbjct: 74 TPQIPTP 80


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 SRTPSLP 8
SR+PSLP
Sbjct: 2 SRSPSLP 8


>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 RSRTPSLPT 9
R +TP +PT
Sbjct: 487 RGQTPYIPT 495




107|Sequence|531|540|SLPTPPTREP

>sp|Y238_METTH|UNCHARACTERIZED protein MTH_238|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 PTPPTRE 9
P PPT E
Sbjct: 275 PVPPTSE 281


>sp|Y1987_ARCFU|UNCHARACTERIZED protein AF_1987|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LPTPPTRE 9
+PTPP ++
Sbjct: 125 IPTPPIKK 132


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LPTPPTREP 10
LP PP+ P
Sbjct: 6 LPLPPSYRP 14


>sp|Y1804_AERPE|UNCHARACTERIZED protein APE_1804|Aeropyrum pernix (strain ATCC 700893

Query: 3 PTPPTREP 10
P PPT P
Sbjct: 12 PGPPTEAP 19


>sp|SYS2_METVS|TYPE-2 serine--tRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 5 PPTREP 10
PP REP
Sbjct: 273 PPKREP 278


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 1 SLPTPP 6
S+PTPP
Sbjct: 670 SIPTPP 675


>sp|RL5_AERPE|LARGE ribosomal subunit protein uL5|Aeropyrum pernix (strain ATCC

Query: 1 SLPTPPTR 8
SLP PP R
Sbjct: 7 SLPIPPER 14


>sp|SYS2_METMP|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 5 PPTREP 10
PP REP
Sbjct: 273 PPKREP 278


>sp|SYS2_METM7|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 5 PPTREP 10
PP REP
Sbjct: 273 PPKREP 278


>sp|VHCG_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit G|Archaeoglobus profundus (strain

Query: 3 PTPPTRE 9
P PPTR+
Sbjct: 266 PIPPTRD 272


>sp|SYS2_METM6|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 5 PPTREP 10
PP REP
Sbjct: 273 PPKREP 278


>sp|SYS2_METM5|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 5 PPTREP 10
PP REP
Sbjct: 273 PPKREP 278


>sp|SYS2_METJA|TYPE-2 serine--tRNA ligase|Methanocaldococcus jannaschii (strain ATCC

Query: 5 PPTREP 10
PP REP
Sbjct: 276 PPKREP 281


>sp|CRYD_NATPD|CRYPTOCHROME DASH|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SLPTPPT 7
LPTPPT
Sbjct: 141 DLPTPPT 147




108|Sequence|536|545|PTREPKKVAV

>sp|RFCS_PYRFU|REPLICATION factor C small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PTREPKKV 8
P EPKKV
Sbjct: 809 PIEEPKKV 816


>sp|RS2_AERPE|SMALL ribosomal subunit protein uS2|Aeropyrum pernix (strain ATCC

Query: 2 TREPKKVAV 10
T EP+K+AV
Sbjct: 64 TFEPEKIAV 72




109|Sequence|541|550|KKVAVVRTPP

>sp|FAU1_AERPE|PROBABLE ribonuclease FAU-1|Aeropyrum pernix (strain ATCC 700893

Query: 2 KVAVVRTPP 10
+V VVR+PP
Sbjct: 130 RVTVVRSPP 138


>sp|HTPX_ARCFU|PROTEASE HtpX homolog|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KVAVVRTPP 10
K VVR+PP
Sbjct: 125 KAVVVRSPP 133


>sp|Y1349_METJA|UNCHARACTERIZED protein MJ1349|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KKVAVVRTP 9
KK+AVV TP
Sbjct: 190 KKLAVVGTP 198


>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 VVRTPP 10
VVRTPP
Sbjct: 134 VVRTPP 139


>sp|FTTA_THEKO|TRANSCRIPTION termination factor FttA|Thermococcus kodakarensis (strain ATCC

Query: 5 VVRTPP 10
VVRTPP
Sbjct: 139 VVRTPP 144


>sp|FTTA_PYRHO|TRANSCRIPTION termination factor FttA|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 VVRTPP 10
VVRTPP
Sbjct: 142 VVRTPP 147


>sp|FTTA_PYRAB|TRANSCRIPTION termination factor FttA|Pyrococcus abyssi (strain GE5 /

Query: 5 VVRTPP 10
VVRTPP
Sbjct: 139 VVRTPP 144




110|Sequence|546|555|VRTPPKSPSS

>sp|COFE_METAC|COENZYME F420:L-glutamate ligase|Methanosarcina acetivorans (strain ATCC

Query: 4 PPKSPSS 10
PPK+P S
Sbjct: 121 PPKNPDS 127


>sp|CDC64_HALSA|ORC1-TYPE DNA replication protein 4|Halobacterium salinarum (strain ATCC

Query: 3 TPPKSPSS 10
TP SPSS
Sbjct: 2 TPDSSPSS 9


>sp|NADE_AERPE|NH(3)-DEPENDENT NAD(+) synthetase|Aeropyrum pernix (strain ATCC 700893

Query: 2 RTPPKSP 8
R+PP SP
Sbjct: 264 RSPPASP 270


>sp|CDC62_HALSA|ORC1-TYPE DNA replication protein 2|Halobacterium salinarum (strain ATCC

Query: 3 TPPKSPSS 10
TP SPSS
Sbjct: 2 TPDSSPSS 9




111|Sequence|551|560|KSPSSAKSRL

>sp|MTD_METST|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosphaera

Query: 1 KSPSSAKSRL 10
KSPSSA+ L
Sbjct: 73 KSPSSARETL 82




112|Sequence|556|565|AKSRLQTAPV

***** No hits found ******


113|Sequence|561|570|QTAPVPMPDL

>sp|HJE_SULAC|CROSSOVER junction endodeoxyribonuclease Hje|Sulfolobus acidocaldarius

Query: 2 TAPVPMPDL 10
++P P+PD+
Sbjct: 32 SSPNPLPDI 40


>sp|SYK_METKA|LYSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 APVPMP 8
APVP+P
Sbjct: 286 APVPVP 291


>sp|RS3_STAMF|SMALL ribosomal subunit protein uS3|Staphylothermus marinus (strain

Query: 3 APVPMPDL 10
+PVP PDL
Sbjct: 86 SPVPDPDL 93


>sp|Y2265_METBU|PUTATIVE nickel insertion protein|Methanococcoides burtonii (strain DSM 6242

Query: 2 TAPVPMP 8
T PVP+P
Sbjct: 160 TLPVPVP 166


>sp|HJE_SACI5|CROSSOVER junction endodeoxyribonuclease Hje|Saccharolobus islandicus

Query: 2 TAPVPMPDL 10
++P P+PD+
Sbjct: 32 SSPNPLPDI 40


>sp|KTHY_METKA|PROBABLE thymidylate kinase|Methanopyrus kandleri (strain AV19 /

Query: 4 PVPMPDL 10
PVP PD+
Sbjct: 108 PVPKPDV 114


>sp|LEUC_HALLT|3-ISOPROPYLMALATE dehydratase large subunit|Halorubrum lacusprofundi (strain ATCC

Query: 2 TAPVPMPD 9
T P+P PD
Sbjct: 303 TEPIPDPD 310


>sp|LYSY_IGNH4|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 APVPMPDL 10
AP+P PD+
Sbjct: 286 APMPYPDV 293


>sp|HJE_SACS2|CROSSOVER junction endodeoxyribonuclease Hje|Saccharolobus solfataricus

Query: 2 TAPVPMPDL 10
++P P+PD+
Sbjct: 32 SSPNPLPDI 40


>sp|TRM1_METMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina mazei

Query: 2 TAPVPMPD 9
+ PVP PD
Sbjct: 14 SVPVPPPD 21


>sp|NADM_SACS2|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 VPMPDL 10
+PMPD+
Sbjct: 74 IPMPDI 79




114|Sequence|566|575|PMPDLKNVKS

>sp|LYSY_IGNH4|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 PMPDLKNV 8
P PD+KNV
Sbjct: 289 PYPDVKNV 296


>sp|PAN_ARCFU|PROTEASOME-ACTIVATING nucleotidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PMPDLKNV 8
P+PDLK V
Sbjct: 388 PIPDLKGV 395


>sp|GLMM_METJA|PHOSPHOGLUCOSAMINE mutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PMPDLKNVK 9
P PD KN+K
Sbjct: 202 PEPDEKNLK 210


>sp|Y1465_ARCFU|UNCHARACTERIZED protein AF_1465|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PMPDLKNVKS 10
PMP LKN S
Sbjct: 56 PMPPLKNSTS 65


>sp|ARGC_META3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 PDLKNVKS 10
P+LKN+K+
Sbjct: 47 PNLKNIKN 54


>sp|SERC_METMA|PHOSPHOSERINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 MPDLKNV 8
+PDL+NV
Sbjct: 124 LPDLENV 130




115|Sequence|571|580|KNVKSKIGST

>sp|Y1542_METJA|UNCHARACTERIZED protein MJ1542|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KNVKSKI 7
KNVKSKI
Sbjct: 381 KNVKSKI 387




116|Sequence|576|585|KIGSTENLKH

>sp|RELB4_METJA|PUTATIVE antitoxin RelB4|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IGSTENLK 9
IGS ENLK
Sbjct: 71 IGSIENLK 78


>sp|RPO2N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 5 TENLKH 10
TENLKH
Sbjct: 415 TENLKH 420


>sp|GUAAB_METAC|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina

Query: 3 GSTENLKH 10
G TE +KH
Sbjct: 62 GETERIKH 69


>sp|GUAAB_METBF|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina barkeri

Query: 3 GSTENLKH 10
G TE +KH
Sbjct: 62 GETERIKH 69


>sp|DTDA_PYRIL|D-AMINOACYL-TRNA deacylase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 KIGSTEN 7
++GSTEN
Sbjct: 136 EVGSTEN 142


>sp|PYRG_THEVO|CTP synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 TENLKH 10
TEN+KH
Sbjct: 276 TENIKH 281




117|Sequence|581|590|ENLKHQPGGG

>sp|RIBL_METB6|FAD synthase|Methanoregula boonei (strain DSM 21154

Query: 1 ENLKHQP 7
EN+KH+P
Sbjct: 41 ENVKHKP 47


>sp|RFRNP_METAC|RNA-FREE ribonuclease P|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ENLKHQPGG 9
E LKH P G
Sbjct: 218 EYLKHSPEG 226


>sp|SALAC_HALSA|SALACTIN salinarum (strain ATCC 700922

Query: 2 NLKHQPGGG 10
++ QPGGG
Sbjct: 248 DIIQQPGGG 256


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 1 ENLKHQP 7
+NL HQP
Sbjct: 842 DNLYHQP 848


>sp|TOP6B_METBU|TYPE 2 DNA topoisomerase 6|Methanococcoides burtonii (strain DSM 6242

Query: 5 HQPGGG 10
+QPGGG
Sbjct: 406 NQPGGG 411


>sp|THIC_SULTO|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ENLKHQPGGG 10
E+ KH+ GG
Sbjct: 128 ESFKHKSGGA 137


>sp|RELE3_METJA|TOXIN RelE3|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ENLKHQPG 8
++LKH PG
Sbjct: 11 KDLKHVPG 18


>sp|SUDHA_PYRFU|SULFIDE dehydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 5 HQPGG 9
HQPGG
Sbjct: 187 HQPGG 191


>sp|TOP6B_METAC|TYPE 2 DNA topoisomerase 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 HQPGGG 10
+QPGGG
Sbjct: 406 NQPGGG 411


>sp|RIBL_METP4|FAD synthase|Methanolacinia petrolearia (strain DSM 11571

Query: 1 ENLKHQP 7
EN++H+P
Sbjct: 39 ENVRHKP 45


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 ENLKHQPG 8
+N+K QPG
Sbjct: 224 KNIKPQPG 231


>sp|TOP6B_METMA|TYPE 2 DNA topoisomerase 6|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 HQPGGG 10
+QPGGG
Sbjct: 406 NQPGGG 411


>sp|TOP6B_METBF|TYPE 2 DNA topoisomerase 6|Methanosarcina barkeri (strain Fusaro /

Query: 5 HQPGGG 10
+QPGGG
Sbjct: 406 NQPGGG 411


>sp|PORB_PYRFU|PYRUVATE synthase subunit PorB|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NLKHQPGGG 10
N+K QP GG
Sbjct: 258 NIKIQPPGG 266


>sp|MFNA_METLZ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanocorpusculum labreanum

Query: 3 LKHQPGGG 10
L H PG G
Sbjct: 75 LMHHPGAG 82


>sp|PORB_PYRHO|PYRUVATE synthase subunit PorB|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NLKHQPGGG 10
N+K QP GG
Sbjct: 258 NIKIQPPGG 266




118|Sequence|586|595|QPGGGKVQII

>sp|KCY_PYRNV|CYTIDYLATE kinase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 QPGGGKVQI 9
QPG GK I
Sbjct: 9 QPGSGKTTI 17


>sp|KCY_PYRAR|CYTIDYLATE kinase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 QPGGGKVQI 9
QPG GK I
Sbjct: 9 QPGSGKTTI 17


>sp|KCY_PYRAE|CYTIDYLATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 QPGGGKVQI 9
QPG GK I
Sbjct: 9 QPGSGKTTI 17


>sp|KCY_METAR|CYTIDYLATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 QPGGGKVQI 9
QPG GK +
Sbjct: 8 QPGSGKTSV 16


>sp|RS27_METHJ|SMALL ribosomal subunit protein eS27|Methanospirillum hungatei JF-1

Query: 2 PGGGKVQI 9
P GGK QI
Sbjct: 46 PTGGKAQI 53


>sp|KCY_PYRIL|CYTIDYLATE kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 QPGGGKVQI 9
QPG GK +
Sbjct: 9 QPGSGKTTV 17


>sp|KCY_PYRCJ|CYTIDYLATE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 QPGGGKVQI 9
QPG GK +
Sbjct: 9 QPGSGKTTV 17


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 PGGGKV 7
PGGG+V
Sbjct: 674 PGGGRV 679


>sp|SALAC_HALSA|SALACTIN salinarum (strain ATCC 700922

Query: 1 QPGGG 5
QPGGG
Sbjct: 252 QPGGG 256


>sp|RFCL_THEPD|REPLICATION factor C large subunit|Thermofilum pendens (strain DSM 2475

Query: 2 PGGGKVQII 10
PG GK I+
Sbjct: 56 PGSGKTSIV 64


>sp|NUCS2_HALSA|ENDONUCLEASE NucS 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 PGGGKVQ 8
PGGG V+
Sbjct: 76 PGGGTVE 82


>sp|RS27_METKA|SMALL ribosomal subunit protein eS27|Methanopyrus kandleri (strain AV19

Query: 1 QPGGGKVQII 10
+P GGK +I+
Sbjct: 56 KPTGGKAKIL 65


>sp|KCY_STAMF|CYTIDYLATE kinase|Staphylothermus marinus (strain ATCC 43588

Query: 2 PGGGK 6
PGGGK
Sbjct: 10 PGGGK 14


>sp|Y920_THESM|UPF0200 protein TSIB_0920|Thermococcus sibiricus (strain DSM 12597

Query: 2 PGGGKVQII 10
PG GK QI+
Sbjct: 9 PGSGKGQIV 17


>sp|THSA_SACSH|CHAPERONIN subunit alpha|Saccharolobus shibatae (strain ATCC 51178

Query: 2 PGGGKVQI 9
PGGG +++
Sbjct: 414 PGGGAIEL 421


>sp|Y209_ARCFU|UNCHARACTERIZED protein AF_0209|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QPGGGKVQI 9
+ GGGK+++
Sbjct: 197 EKGGGKIEV 205


>sp|TOP6B_METBU|TYPE 2 DNA topoisomerase 6|Methanococcoides burtonii (strain DSM 6242

Query: 1 QPGGG 5
QPGGG
Sbjct: 407 QPGGG 411


>sp|THSA_SACS2|CHAPERONIN subunit alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PGGGKVQI 9
PGGG +++
Sbjct: 414 PGGGAIEL 421


>sp|ENO_THEON|ENOLASE onnurineus (strain NA1)

Query: 4 GGKVQII 10
GGK+QI+
Sbjct: 307 GGKIQIV 313


>sp|Y1344_THEON|UPF0200 protein TON_1344|Thermococcus onnurineus (strain NA1)

Query: 2 PGGGKVQII 10
PG GK +I+
Sbjct: 9 PGSGKSKIV 17


>sp|RS27_AERPE|SMALL ribosomal subunit protein eS27|Aeropyrum pernix (strain ATCC

Query: 1 QPGGGKVQII 10
+P GGK +I+
Sbjct: 56 EPTGGKARIL 65




119|Sequence|591|600|KVQIINKKLD

>sp|ILVD_METJA|DIHYDROXY-ACID dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KVQIINKKLD 10
K+ +INKKLD
Sbjct: 498 KIDMINKKLD 507


>sp|AATA_METKA|A-TYPE ATP synthase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 1 KVQIINKKLD 10
K+Q I KK+D
Sbjct: 572 KIQEIRKKID 581


>sp|TFE_NANEQ|TRANSCRIPTION factor E|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 QIINKKLD 10
QIINKK D
Sbjct: 6 QIINKKQD 13


>sp|EF1A_METBU|ELONGATION factor 1-alpha|Methanococcoides burtonii (strain DSM 6242

Query: 5 INKKLD 10
INKKLD
Sbjct: 352 INKKLD 357


>sp|DTDA_METPE|D-AMINOACYL-TRNA deacylase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 KVQIINKKLD 10
K+ ++N +LD
Sbjct: 2 KITLVNSRLD 11




120|Sequence|596|605|NKKLDLSNVQ

>sp|GATC_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit C|Sulfurisphaera tokodaii (strain DSM

Query: 3 KLDLSNVQ 10
KLDLSNV+
Sbjct: 45 KLDLSNVE 52


>sp|ILVD_METJA|DIHYDROXY-ACID dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NKKLDLS 7
NKKLDL+
Sbjct: 503 NKKLDLA 509


>sp|TOP6B_SACS2|TYPE 2 DNA topoisomerase 6|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NKKLDLSNVQ 10
+KKLDL N++
Sbjct: 510 SKKLDLINIE 519


>sp|TOP6B_SACI7|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 NKKLDLSNVQ 10
+KKLDL N++
Sbjct: 510 SKKLDLINIE 519


>sp|TOP6B_SACI6|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.4 /

Query: 1 NKKLDLSNVQ 10
+KKLDL N++
Sbjct: 510 SKKLDLINIE 519


>sp|TOP6B_SACI4|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.14.25 /

Query: 1 NKKLDLSNVQ 10
+KKLDL N++
Sbjct: 510 SKKLDLINIE 519


>sp|TOP6B_SACI3|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.27)

Query: 1 NKKLDLSNVQ 10
+KKLDL N++
Sbjct: 510 SKKLDLINIE 519


>sp|TOP6B_SACI2|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 NKKLDLSNVQ 10
+KKLDL N++
Sbjct: 510 SKKLDLINIE 519


>sp|TOP6B_SACSH|TYPE 2 DNA topoisomerase 6|Saccharolobus shibatae (strain ATCC 51178

Query: 1 NKKLDLSNVQ 10
+KKLDL N++
Sbjct: 510 SKKLDLINIE 519


>sp|TOP6B_SACI1|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 NKKLDLSNVQ 10
+KKLDL N++
Sbjct: 510 SKKLDLINIE 519


>sp|GATC_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit C|Saccharolobus solfataricus (strain

Query: 3 KLDLSNVQ 10
+LDLSNV+
Sbjct: 45 ELDLSNVE 52


>sp|GATC_SACI7|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Saccharolobus islandicus (strain

Query: 3 KLDLSNVQ 10
+LDLSNV+
Sbjct: 45 ELDLSNVE 52


>sp|GATC_SACI6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Saccharolobus islandicus (strain

Query: 3 KLDLSNVQ 10
+LDLSNV+
Sbjct: 45 ELDLSNVE 52


>sp|GATC_SACI4|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Saccharolobus islandicus (strain

Query: 3 KLDLSNVQ 10
+LDLSNV+
Sbjct: 45 ELDLSNVE 52


>sp|GATC_SACI3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Saccharolobus islandicus (strain

Query: 3 KLDLSNVQ 10
+LDLSNV+
Sbjct: 45 ELDLSNVE 52


>sp|GATC_SACI2|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Saccharolobus islandicus (strain

Query: 3 KLDLSNVQ 10
+LDLSNV+
Sbjct: 45 ELDLSNVE 52


>sp|GATC_SACI1|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Saccharolobus islandicus (strain

Query: 3 KLDLSNVQ 10
+LDLSNV+
Sbjct: 45 ELDLSNVE 52




121|Sequence|601|610|LSNVQSKCGS

>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 LSNVQSKCGS 10
+SNV+ CG+
Sbjct: 659 ISNVKCSCGN 668


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 LSNVQSKCGS 10
+SNV+ CG+
Sbjct: 659 ISNVKCSCGN 668


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 LSNVQSKCGS 10
+SNV+ CG+
Sbjct: 659 ISNVKCSCGN 668


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 1 LSNVQSKCG 9
+SNV CG
Sbjct: 659 ISNVMCSCG 667




122|Sequence|606|615|SKCGSKDNIK

>sp|Y397_ARCFU|UNCHARACTERIZED protein AF_0397|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KCGSKDNIK 10
KCGS+ +IK
Sbjct: 110 KCGSEGSIK 118


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KCGSKDNI 9
KCG+KD I
Sbjct: 439 KCGNKDLI 446


>sp|HYPA_THEON|HYDROGENASE maturation factor HypA|Thermococcus onnurineus (strain NA1)

Query: 2 KCGSKD 7
KCGS+D
Sbjct: 112 KCGSRD 117


>sp|PUR2_ARCFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SKCGSKDNIK 10
SKC +KD +K
Sbjct: 110 SKCWAKDFLK 119


>sp|PURQ_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Natronomonas pharaonis (strain ATCC 35678

Query: 4 GSKDNI 9
GSKDN+
Sbjct: 181 GSKDNV 186


>sp|RS14Z_SACS2|SMALL ribosomal subunit protein uS14|Saccharolobus solfataricus (strain

Query: 2 KCGSKDNI 9
+CGSKD++
Sbjct: 21 RCGSKDSV 28




123|Sequence|611|620|KDNIKHVPGG

>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KDNIKHVPG 9
+D IKH+PG
Sbjct: 520 EDEIKHIPG 528


>sp|Y1111_PYRAE|UNCHARACTERIZED protein PAE1111|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 KHVPGG 10
KH+PGG
Sbjct: 175 KHLPGG 180


>sp|RADA_NANEQ|DNA repair and recombination protein|Nanoarchaeum equitans (strain

Query: 1 KDNIKHVPG 9
KD+I+ +PG
Sbjct: 10 KDDIRSLPG 18


>sp|NAT_SULAC|N-ALPHA-ACETYLTRANSFERASE acidocaldarius (strain ATCC 33909

Query: 3 NIKHVP 8
N+KH+P
Sbjct: 77 NLKHIP 82


>sp|RELE3_METJA|TOXIN RelE3|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NIKHVPG 9
++KHVPG
Sbjct: 12 DLKHVPG 18


>sp|GUAAA_METJA|GMP synthase [glutamine-hydrolyzing] subunit A|Methanocaldococcus

Query: 1 KDNIKHVPGG 10
KD +K VP G
Sbjct: 126 KDEVKKVPEG 135


>sp|ORNAT_PYRHO|ORNITHINE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KDNIKHVPG 9
K N+K +PG
Sbjct: 4 KPNVKEIPG 12


>sp|HEM1_SACI7|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 KDNIKHV 7
KD+IKH+
Sbjct: 95 KDSIKHL 101


>sp|HEM1_SACI6|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KDNIKHV 7
KD+IKH+
Sbjct: 95 KDSIKHL 101


>sp|HEM1_SACI4|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KDNIKHV 7
KD+IKH+
Sbjct: 95 KDSIKHL 101


>sp|HEM1_SACI3|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 KDNIKHV 7
KD+IKH+
Sbjct: 95 KDSIKHL 101


>sp|HEM1_SACI2|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 KDNIKHV 7
KD+IKH+
Sbjct: 95 KDSIKHL 101


>sp|HEM1_SACI1|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 KDNIKHV 7
KD+IKH+
Sbjct: 95 KDSIKHL 101


>sp|GUAAB_METMJ|GMP synthase [glutamine-hydrolyzing] subunit B|Methanoculleus

Query: 1 KDNIKHVPGG 10
KD ++ V GG
Sbjct: 165 KDEVREVAGG 174


>sp|TYW1_PYRHO|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus horikoshii (strain ATCC

Query: 4 IKHVPG 9
+KH+PG
Sbjct: 303 VKHLPG 308


>sp|TYW1_PYRAB|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus abyssi (strain GE5 /

Query: 4 IKHVPG 9
+KH+PG
Sbjct: 303 VKHLPG 308


>sp|RL37A_METST|LARGE ribosomal subunit protein eL43|Methanosphaera stadtmanae (strain

Query: 1 KDNIKHVPGG 10
K NIK + GG
Sbjct: 79 KRNIKRITGG 88




124|Sequence|616|625|HVPGGGSVQI

>sp|Y1211_METTH|PUTATIVE transport protein MTH_1211|Methanothermobacter thermautotrophicus

Query: 1 HVPGGGSVQ 9
HVPG G++Q
Sbjct: 99 HVPGAGNLQ 107


>sp|THSB_DESM0|CHAPERONIN subunit beta|Desulfurococcus mucosus (strain ATCC 35584

Query: 2 VPGGGSVQI 10
+PGGG+ +I
Sbjct: 409 IPGGGAAEI 417


>sp|RQCH_METJA|ARCHAEAL Rqc2 homolog aRqcH|Methanocaldococcus jannaschii (strain ATCC

Query: 1 HVPGGGSVQI 10
HVP GGS ++
Sbjct: 44 HVPEGGSREL 53


>sp|THSA_SACSH|CHAPERONIN subunit alpha|Saccharolobus shibatae (strain ATCC 51178

Query: 2 VPGGGSVQI 10
+PGGG++++
Sbjct: 413 LPGGGAIEL 421


>sp|COBQ_METKA|PROBABLE cobyric acid synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 HVPGGGSVQI 10
H PG GSV+I
Sbjct: 243 HSPGRGSVRI 252


>sp|THSA_SACS2|CHAPERONIN subunit alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VPGGGSVQI 10
+PGGG++++
Sbjct: 413 LPGGGAIEL 421


>sp|NUCS2_HALSA|ENDONUCLEASE NucS 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 VPGGGSVQ 9
+PGGG+V+
Sbjct: 75 MPGGGTVE 82


>sp|THSB_HALSA|THERMOSOME subunit beta|Halobacterium salinarum (strain ATCC 700922

Query: 2 VPGGGSVQI 10
+PGGG+ ++
Sbjct: 410 LPGGGATEV 418


>sp|THSB_SACS2|CHAPERONIN subunit beta|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VPGGGSVQI 10
V GGG+V+I
Sbjct: 414 VAGGGAVEI 422


>sp|THSB_SACSH|CHAPERONIN subunit beta|Saccharolobus shibatae (strain ATCC 51178

Query: 2 VPGGGSVQI 10
V GGG+V+I
Sbjct: 414 VAGGGAVEI 422


>sp|Y1063_METPE|UPF0173 metal-dependent hydrolase Mpal_1063|Methanosphaerula palustris

Query: 2 VPGGGSVQI 10
+P GGS++I
Sbjct: 210 LPSGGSIEI 218


>sp|Y1954_ARCFU|PUTATIVE amidase AF_1954|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GGGSVQI 10
GGGS++I
Sbjct: 163 GGGSIRI 169


>sp|THSB_SULTO|CHAPERONIN subunit beta|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VPGGGSVQI 10
V GGG+V++
Sbjct: 415 VAGGGAVEL 423




125|Sequence|621|630|GSVQIVYKPV

>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GSVQIVYKPV 10
GSV ++Y P+
Sbjct: 508 GSVDVIYTPI 517


>sp|RS5_AERPE|SMALL ribosomal subunit protein uS5|Aeropyrum pernix (strain ATCC 700893

Query: 1 GSVQIVYKP 9
GSV+++ KP
Sbjct: 144 GSVEVILKP 152


>sp|RS5_HYPBU|SMALL ribosomal subunit protein uS5|Hyperthermus butylicus (strain DSM

Query: 1 GSVQIVYKP 9
GSV+++ KP
Sbjct: 143 GSVEVILKP 151


>sp|TRPD_METST|ANTHRANILATE phosphoribosyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 2 SVQIVYKP 9
+VQI YKP
Sbjct: 66 AVQIDYKP 73


>sp|RS5_METBU|SMALL ribosomal subunit protein uS5|Methanococcoides burtonii (strain DSM

Query: 1 GSVQIVYKP 9
GSV +V KP
Sbjct: 139 GSVTVVLKP 147


>sp|RS5_IGNH4|SMALL ribosomal subunit protein uS5|Ignicoccus hospitalis (strain KIN4/I

Query: 1 GSVQIVYKP 9
GSV+++ KP
Sbjct: 140 GSVEVILKP 148


>sp|RTCA_DESA1|RNA 3'-terminal phosphate cyclase|Desulfurococcus amylolyticus

Query: 1 GSVQIVYKP 9
GS++I++KP
Sbjct: 71 GSMEILFKP 79


>sp|RS5_METKA|SMALL ribosomal subunit protein uS5|Methanopyrus kandleri (strain AV19 /

Query: 1 GSVQIVYKP 9
GSV+I KP
Sbjct: 140 GSVRITLKP 148


>sp|AROE_SACI6|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.16.4 /

Query: 3 VQIVYKPV 10
++ VYKPV
Sbjct: 208 IEFVYKPV 215


>sp|AROE_SACI4|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.14.25 /

Query: 3 VQIVYKPV 10
++ VYKPV
Sbjct: 208 IEFVYKPV 215


>sp|AROE_SACI3|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.16.27)

Query: 3 VQIVYKPV 10
++ VYKPV
Sbjct: 208 IEFVYKPV 215


>sp|AROE_SACI2|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 VQIVYKPV 10
++ VYKPV
Sbjct: 208 IEFVYKPV 215


>sp|AROE_SACI1|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain Y.N.15.51

Query: 3 VQIVYKPV 10
++ VYKPV
Sbjct: 208 IEFVYKPV 215


>sp|RS5_NANEQ|SMALL ribosomal subunit protein uS5|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GSVQIVYKP 9
GSV+++ KP
Sbjct: 150 GSVRVILKP 158


>sp|AROE_SACI7|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain Y.G.57.14

Query: 3 VQIVYKPV 10
++ VYKPV
Sbjct: 208 IEFVYKPV 215


>sp|RS5_THEAC|SMALL ribosomal subunit protein uS5|Thermoplasma acidophilum (strain ATCC

Query: 1 GSVQIVYKPV 10
GSV+I KP
Sbjct: 135 GSVRITLKPA 144


>sp|RS5_THEVO|SMALL ribosomal subunit protein uS5|Thermoplasma volcanium (strain ATCC

Query: 1 GSVQIVYKP 9
GSV+I KP
Sbjct: 135 GSVRITLKP 143




126|Sequence|626|635|VYKPVDLSKV

>sp|MCRB_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VYKPVDLSK 9
+YKPVD++K
Sbjct: 297 LYKPVDVAK 305


>sp|RL32_ARCFU|LARGE ribosomal subunit protein eL32|Archaeoglobus fulgidus (strain

Query: 1 VYKPVDLSKV 10
VY P DL K+
Sbjct: 83 VYNPADLEKI 92


>sp|CCA_METM5|CCA-ADDING enzyme|Methanococcus maripaludis (strain C5 /

Query: 1 VYKPVDLSK 9
VY PVDL++
Sbjct: 243 VYDPVDLNR 251


>sp|CCA_METJA|CCA-ADDING enzyme|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VYKPVDLSK 9
VY PVDL++
Sbjct: 242 VYDPVDLNR 250


Query: 1 VYKPVDLSKV 10
+YK VD++K+
Sbjct: 224 IYKDVDINKL 233


>sp|CCA_METMP|CCA-ADDING enzyme|Methanococcus maripaludis (strain DSM 14266

Query: 1 VYKPVDLSK 9
VY PVDL++
Sbjct: 243 VYDPVDLNR 251


>sp|CCA_METM7|CCA-ADDING enzyme|Methanococcus maripaludis (strain C7 /

Query: 1 VYKPVDLSK 9
VY PVDL++
Sbjct: 243 VYDPVDLNR 251


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YKPVDLSK 9
YKPV+LS+
Sbjct: 1508 YKPVNLSE 1515


Query: 2 YKPVDLSK 9
YKPV+LS+
Sbjct: 1841 YKPVNLSE 1848


>sp|MCRB_METVO|METHYL-COENZYME M reductase subunit beta|Methanococcus voltae

Query: 1 VYKPVDLSK 9
+YKP D++K
Sbjct: 293 MYKPADVNK 301


>sp|RL32_METKA|LARGE ribosomal subunit protein eL32|Methanopyrus kandleri (strain AV19

Query: 1 VYKPVDLSKV 10
VY P DL K+
Sbjct: 87 VYNPKDLEKI 96


>sp|LRS14_SACS2|HTH-TYPE transcriptional regulator lrs14|Saccharolobus solfataricus

Query: 1 VYKPVDLSKV 10
+YKP+D ++
Sbjct: 90 IYKPIDADRI 99


>sp|RFCL_PICTO|REPLICATION factor C large subunit|Picrophilus torridus (strain ATCC 700027

Query: 2 YKPVDLSKV 10
Y+PVD+S++
Sbjct: 7 YRPVDISEL 15


>sp|KAE1_AERPE|TRNA N6-adenosine threonylcarbamoyltransferase|Aeropyrum pernix (strain

Query: 1 VYKPVDL 7
VY+PVD+
Sbjct: 288 VYRPVDV 294


>sp|MCRB_METVA|METHYL-COENZYME M reductase subunit beta|Methanococcus vannielii

Query: 1 VYKPVDLSK 9
+YKP D++K
Sbjct: 293 MYKPADVNK 301


>sp|MRE11_METTH|DNA double-strand break repair protein|Methanothermobacter

Query: 2 YKPVDLS 8
+KPVDL+
Sbjct: 339 FKPVDLA 345


>sp|CDPAS_METVS|CDP-ARCHAEOL synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 KPVDLSK 9
KPVDL+K
Sbjct: 31 KPVDLNK 37


>sp|SEPS_METVS|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VYKPVDLSK 9
VY PV LSK
Sbjct: 300 VYSPVALSK 308


>sp|SEPS_METMP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VYKPVDLSK 9
VY PV LSK
Sbjct: 300 VYSPVALSK 308


>sp|SEPS_METM7|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C7 /

Query: 1 VYKPVDLSK 9
VY PV LSK
Sbjct: 300 VYSPVALSK 308


>sp|SEPS_METM5|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C5 /

Query: 1 VYKPVDLSK 9
VY PV LSK
Sbjct: 300 VYSPVALSK 308


>sp|SEPS_METM6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C6 /

Query: 1 VYKPVDLSK 9
VY PV LSK
Sbjct: 300 VYSPVALSK 308


>sp|Y1487_METJA|UNCHARACTERIZED methyltransferase MJ1487|Methanocaldococcus jannaschii (strain ATCC

Query: 3 KPVDLSK 9
KPVDL+K
Sbjct: 157 KPVDLNK 163


>sp|Y480_METJA|UNCHARACTERIZED protein MJ0480|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VYKPVDLSKV 10
VY P+ LSK+
Sbjct: 139 VYLPIILSKI 148


>sp|RL24_METB6|LARGE ribosomal subunit protein uL24|Methanoregula boonei (strain DSM

Query: 1 VYKPVDLSKV 10
V +P+D SKV
Sbjct: 92 VPRPIDASKV 101


>sp|IDI2_SULTO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VYKPVDLSK 9
+YK +D+SK
Sbjct: 176 LYKLIDISK 184


>sp|GLCD1_HALTV|GLUCOSE 1-dehydrogenase 1|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 VYKPVDL 7
VY+P+DL
Sbjct: 239 VYEPMDL 245




127|Sequence|631|640|DLSKVTSKCG

>sp|DPCKG_PYRFU|GTP-DEPENDENT dephospho-CoA kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LSKVTSKC 9
L KVTS+C
Sbjct: 152 LIKVTSEC 159


>sp|LYSY_NITMS|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 DLSKVTSKC 9
D K+T KC
Sbjct: 60 DYDKLTDKC 68




128|Sequence|636|645|TSKCGSLGNI

>sp|MPTA_THEVO|GTP cyclohydrolase MptA|Thermoplasma volcanium (strain ATCC 51530

Query: 2 SKCGSLGNI 10
+KCG GNI
Sbjct: 120 TKCGIDGNI 128


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 4 CGSLGNI 10
CG+ GNI
Sbjct: 1158 CGNTGNI 1164


>sp|MTD_METKA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanopyrus

Query: 3 KCGSLG 8
KCG+LG
Sbjct: 10 KCGNLG 15


>sp|ASPD_METJA|L-ASPARTATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CGSLGN 9
CG++GN
Sbjct: 9 CGAIGN 14


>sp|Y356_ARCFU|UNCHARACTERIZED sugar kinase AF_0356|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KCGSLGN 9
+CG LGN
Sbjct: 223 ECGRLGN 229


>sp|MOAA_METAC|PROBABLE GTP 3',8-cyclase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 CGSLGN 9
CGSLG+
Sbjct: 57 CGSLGH 62


>sp|RS5_METKA|SMALL ribosomal subunit protein uS5|Methanopyrus kandleri (strain AV19 /

Query: 1 TSKCGSL 7
T KCGS+
Sbjct: 136 TGKCGSV 142


>sp|TRPD_METLZ|ANTHRANILATE phosphoribosyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 1 TSKCGS 6
TSKCGS
Sbjct: 116 TSKCGS 121




129|Sequence|641|650|SLGNIHHKPG

>sp|MFNB_METVS|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 SLGNIHHKPG 10
++G++H+KPG
Sbjct: 58 AIGDVHYKPG 67


>sp|DP2S_PYRAB|DNA polymerase II small subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 GNIHHKPG 10
G HHKPG
Sbjct: 510 GLTHHKPG 517


>sp|KDPB_THEVO|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma volcanium (strain ATCC

Query: 1 SLGNIHHKP 9
+LG +H+KP
Sbjct: 620 ALGGVHYKP 628


>sp|DP2S_PYRFU|DNA polymerase II small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GNIHHKPG 10
G HHKPG
Sbjct: 504 GLTHHKPG 511


>sp|DP2S_PYRHO|DNA polymerase II small subunit|Pyrococcus horikoshii (strain ATCC

Query: 3 GNIHHKPG 10
G HHKPG
Sbjct: 513 GLTHHKPG 520


>sp|PHR_HALSA|DEOXYRIBODIPYRIMIDINE photo-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 5 IHHKPG 10
+HH+PG
Sbjct: 135 VHHRPG 140


>sp|Y392_METJA|ZINC metalloprotease MJ0392|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LGNIHHKPG 10
+GNIH K G
Sbjct: 268 IGNIHKKEG 276


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LGNIHHKPG 10
+GNIH K G
Sbjct: 554 IGNIHRKGG 562


>sp|MFNB_METTH|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 SLGNIHHKPG 10
+LG++ +KPG
Sbjct: 58 TLGDVPYKPG 67


>sp|AROA_ARCFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GNIHHKPG 10
GN +H PG
Sbjct: 208 GNFYHIPG 215


>sp|MFNB_METS3|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 SLGNIHHKPG 10
+LG++ +KPG
Sbjct: 58 TLGDVPYKPG 67


>sp|MFNA_METLZ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanocorpusculum labreanum

Query: 1 SLGNIHHKPG 10
SLG + H PG
Sbjct: 71 SLGELMHHPG 80


>sp|COMC_METJA|L-SULFOLACTATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LGNIHHKP 9
LGNI+ KP
Sbjct: 58 LGNINPKP 65


>sp|DKFP_METJA|FRUCTOSE-BISPHOSPHATE aldolase/6-deoxy-5-ketofructose 1-phosphate

Query: 4 NIHHKP 9
NIH KP
Sbjct: 272 NIHQKP 277


>sp|VHCD_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Archaeoglobus profundus (strain

Query: 2 LGNIHHKPG 10
LG+ H+K G
Sbjct: 70 LGDCHYKEG 78


>sp|BARAC_PYRHO|BROAD substrate specificity amino-acid racemase|Pyrococcus horikoshii

Query: 2 LGNIHH 7
+GN HH
Sbjct: 181 MGNFHH 186




130|Sequence|646|655|HHKPGGGQVE

>sp|THSA_SACSH|CHAPERONIN subunit alpha|Saccharolobus shibatae (strain ATCC 51178

Query: 4 PGGGQVE 10
PGGG +E
Sbjct: 414 PGGGAIE 420


>sp|THSA_SACS2|CHAPERONIN subunit alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 PGGGQVE 10
PGGG +E
Sbjct: 414 PGGGAIE 420


>sp|NURA_PYRFU|DNA double-strand break repair nuclease|Pyrococcus furiosus (strain

Query: 1 HHKPGG 6
HHK GG
Sbjct: 397 HHKAGG 402


>sp|PSB2_HYPBU|PROTEASOME subunit beta 2|Hyperthermus butylicus (strain DSM 5456

Query: 2 HKPGGGQV 9
H PG GQ+
Sbjct: 3 HHPGTGQL 10


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 HHKPGGGQVE 10
H PG G+V+
Sbjct: 327 HSAPGHGEVD 336


>sp|NUCS2_HALSA|ENDONUCLEASE NucS 2|Halobacterium salinarum (strain ATCC 700922

Query: 4 PGGGQVE 10
PGGG VE
Sbjct: 76 PGGGTVE 82


>sp|RTCA_IGNH4|RNA 3'-terminal phosphate cyclase|Ignicoccus hospitalis (strain KIN4/I

Query: 1 HHKPGGGQVE 10
H+ GGG+VE
Sbjct: 156 HYPKGGGEVE 165


>sp|RTCA_METS5|RNA 3'-terminal phosphate cyclase|Metallosphaera sedula (strain ATCC

Query: 1 HHKPGGGQVE 10
H+ GGG+VE
Sbjct: 154 HYPEGGGEVE 163


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 4 PGGGQV 9
PGGG+V
Sbjct: 674 PGGGRV 679


>sp|RTCA_PYRCJ|RNA 3'-terminal phosphate cyclase|Pyrobaculum calidifontis (strain DSM

Query: 1 HHKPGGGQVE 10
H+ GGG+VE
Sbjct: 156 HYPKGGGRVE 165


>sp|PHR_HALSA|DEOXYRIBODIPYRIMIDINE photo-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 1 HHKPG 5
HH+PG
Sbjct: 136 HHRPG 140


>sp|NDRZ_THEAC|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Thermoplasma

Query: 2 HKPGGG 7
HK GGG
Sbjct: 273 HKSGGG 278


>sp|NDK_METPE|NUCLEOSIDE diphosphate kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 HKPGGGQV 9
H PG GQV
Sbjct: 130 HFPGTGQV 137


>sp|MFNA_METB6|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoregula boonei (strain

Query: 1 HHKPGGG 7
HHK GG
Sbjct: 77 HHKNAGG 83


>sp|RTCA_SULTO|RNA 3'-terminal phosphate cyclase|Sulfurisphaera tokodaii (strain DSM

Query: 1 HHKPGGGQVE 10
H+ GGG+++
Sbjct: 155 HYPEGGGEIK 164


>sp|RTCA_SACI4|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 1 HHKPGGGQV 9
H+ GGG+V
Sbjct: 155 HYPEGGGEV 163


>sp|RTCA_SACI3|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 1 HHKPGGGQV 9
H+ GGG+V
Sbjct: 155 HYPEGGGEV 163


>sp|RTCA_SACI1|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 1 HHKPGGGQV 9
H+ GGG+V
Sbjct: 155 HYPEGGGEV 163


>sp|RTCA_SACS2|RNA 3'-terminal phosphate cyclase|Saccharolobus solfataricus (strain

Query: 1 HHKPGGGQV 9
H+ GGG+V
Sbjct: 155 HYPEGGGEV 163


>sp|RTCA_SACI7|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 1 HHKPGGGQV 9
H+ GGG+V
Sbjct: 155 HYPEGGGEV 163


>sp|RTCA_SACI6|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 1 HHKPGGGQV 9
H+ GGG+V
Sbjct: 155 HYPEGGGEV 163


>sp|RTCA_SACI2|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 1 HHKPGGGQV 9
H+ GGG+V
Sbjct: 155 HYPEGGGEV 163


>sp|HPCAS_METS5|3-HYDROXYPROPIONYL-COENZYME A synthetase|Metallosphaera sedula (strain ATCC 51363

Query: 2 HKPGGGQVE 10
H+ G G+VE
Sbjct: 534 HRIGAGEVE 542




131|Sequence|651|660|GGQVEVKSEK

***** No hits found ******


132|Sequence|656|665|VKSEKLDFKD

>sp|ILVD_SACS2|DIHYDROXY-ACID dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VKSEKLDFK 9
V+SE+LD K
Sbjct: 506 VESERLDLK 514


>sp|ILVD_SACI7|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VKSEKLDFK 9
V+SE+LD K
Sbjct: 506 VESERLDLK 514


>sp|ILVD_SACI6|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VKSEKLDFK 9
V+SE+LD K
Sbjct: 506 VESERLDLK 514


>sp|ILVD_SACI4|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VKSEKLDFK 9
V+SE+LD K
Sbjct: 506 VESERLDLK 514


>sp|ILVD_SACI3|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 VKSEKLDFK 9
V+SE+LD K
Sbjct: 506 VESERLDLK 514


>sp|ILVD_SACI2|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VKSEKLDFK 9
V+SE+LD K
Sbjct: 506 VESERLDLK 514


>sp|ILVD_SACI1|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VKSEKLDFK 9
V+SE+LD K
Sbjct: 506 VESERLDLK 514


>sp|PSTK_METMP|L-SERYL-TRNA(SEC) kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VKSEKLDFK 9
++SEKLDF+
Sbjct: 232 IESEKLDFE 240


>sp|RADA_METS3|DNA repair and recombination protein|Methanobrevibacter smithii

Query: 2 KSEKLDFK 9
KSEK+DF+
Sbjct: 57 KSEKIDFE 64


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 1 VKSEKLD 7
VKSEKLD
Sbjct: 935 VKSEKLD 941


>sp|TFE_METST|TRANSCRIPTION factor E|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 SEKLDFKD 10
+EKL+FKD
Sbjct: 153 NEKLEFKD 160


>sp|IF2B_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain

Query: 3 SEKLDFKD 10
SEK+DF D
Sbjct: 2 SEKVDFYD 9


>sp|RADA_METST|DNA repair and recombination protein|Methanosphaera stadtmanae

Query: 2 KSEKLDFK 9
K+EK+DF+
Sbjct: 57 KAEKIDFE 64




133|Sequence|661|670|LDFKDRVQSK

>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 DFKDRVQSK 10
DF+DRV ++
Sbjct: 375 DFRDRVNNE 383


>sp|DNLJ_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 1 LDFKDRVQS 9
+D++DR+Q+
Sbjct: 288 IDYRDRMQA 296




134|Sequence|666|675|RVQSKIGSLD

>sp|RL29_SACS2|LARGE ribosomal subunit protein uL29|Saccharolobus solfataricus (strain

Query: 1 RVQSKIGSL 9
RVQS++G+L
Sbjct: 31 RVQSRMGTL 39




135|Sequence|671|680|IGSLDNITHV

>sp|PURQ_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GSLDNITHV 10
GSLDNIT V
Sbjct: 177 GSLDNITGV 185


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 1 IGSLDNITHV 10
IG+L NIT+V
Sbjct: 79 IGNLLNITYV 88


>sp|PYRB_KORCO|ASPARTATE carbamoyltransferase catalytic subunit|Korarchaeum cryptofilum

Query: 2 GSLDNITH 9
G+LDN+T+
Sbjct: 144 GNLDNLTY 151


>sp|SODM2_HALVD|SUPEROXIDE dismutase [Mn] 2|Haloferax volcanii (strain ATCC 29605

Query: 2 GSLDNITH 9
G+L N+TH
Sbjct: 60 GALRNVTH 67


>sp|SODM1_HALVD|SUPEROXIDE dismutase [Mn] 1|Haloferax volcanii (strain ATCC 29605

Query: 2 GSLDNITH 9
G+L N+TH
Sbjct: 61 GALRNVTH 68


>sp|PURQ_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GSLDNITHV 10
GS+DNI V
Sbjct: 181 GSIDNIAGV 189


>sp|DNLI_HYPBU|DNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 4 LDNITHV 10
L+NITH+
Sbjct: 290 LENITHM 296


>sp|MFNA_METM5|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 1 IGSLDNI 7
+GS+DNI
Sbjct: 170 LGSIDNI 176


>sp|MFNA_METVS|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus vannielii

Query: 1 IGSLDNITHV 10
+GS+DNI +
Sbjct: 170 LGSIDNIAEL 179


>sp|MFNA_METM7|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 1 IGSLDNI 7
+GS+DNI
Sbjct: 170 LGSIDNI 176




136|Sequence|676|685|NITHVPGGGN

>sp|Y1211_METTH|PUTATIVE transport protein MTH_1211|Methanothermobacter thermautotrophicus

Query: 4 HVPGGGN 10
HVPG GN
Sbjct: 99 HVPGAGN 105


>sp|Y993_METJA|PUTATIVE hydrogenase expression/formation protein

Query: 1 NITHVPGGG 9
NIT VPG G
Sbjct: 52 NITVVPGPG 60


>sp|METXA_METVS|HOMOSERINE O-acetyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 NITHVP 6
NITH+P
Sbjct: 399 NITHIP 404


>sp|PUS10_THEAM|TRNA pseudouridine synthase Pus10|Thermosphaera aggregans (strain DSM

Query: 1 NITHVP 6
NI+HVP
Sbjct: 223 NISHVP 228


>sp|FSR_METJA|COENZYME F420-dependent sulfite reductase|Methanocaldococcus jannaschii

Query: 6 PGGGN 10
PGGGN
Sbjct: 429 PGGGN 433


>sp|Y1495_METJA|UNCHARACTERIZED protein MJ1495|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ITHVPGG 8
I H PGG
Sbjct: 104 IIHTPGG 110


>sp|Y137_METJA|UNCHARACTERIZED protein MJ0137|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ITHVPGG 8
I H PGG
Sbjct: 100 IIHTPGG 106


>sp|PURQ_METMP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanococcus maripaludis (strain DSM 14266

Query: 1 NITHVP 6
N+THVP
Sbjct: 153 NVTHVP 158


>sp|RQCH_METJA|ARCHAEAL Rqc2 homolog aRqcH|Methanocaldococcus jannaschii (strain ATCC

Query: 4 HVPGGGN 10
HVP GG+
Sbjct: 44 HVPEGGS 50


>sp|BACR_HALSR|CRUXRHODOPSIN-2 sp. (strain arg-2 /

Query: 3 THVPGG 8
T+VPGG
Sbjct: 8 TYVPGG 13


>sp|SURE_HALWD|5'-NUCLEOTIDASE SurE|Haloquadratum walsbyi (strain DSM 16790

Query: 4 HVPGGGN 10
++PGGG+
Sbjct: 126 YIPGGGD 132


>sp|PUR5_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 ITHVPGGG 9
I H+ GGG
Sbjct: 244 IAHITGGG 251


>sp|PGK_METBR|PHOSPHOGLYCERATE kinase|Methanobacterium bryantii

Query: 2 ITHVPGGG 9
ITH+ GG
Sbjct: 375 ITHISSGG 382




137|Sequence|681|690|PGGGNKKIET

>sp|RFCL_PICTO|REPLICATION factor C large subunit|Picrophilus torridus (strain ATCC 700027

Query: 1 PGGGNKKIE 9
PG NKKI+
Sbjct: 235 PGTRNKKID 243


>sp|ABLA_METMA|L-LYSINE 2,3-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PGGGNK 6
PGGG K
Sbjct: 333 PGGGGK 338


>sp|ABLA_METMP|L-LYSINE 2,3-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PGGGNK 6
PGGG K
Sbjct: 343 PGGGGK 348




138|Sequence|686|695|KKIETHKLTF

>sp|SYE_THEAC|GLUTAMATE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KKIETHKL 8
KK+E H+L
Sbjct: 79 KKVEEHRL 86


>sp|END4_THEVO|PROBABLE endonuclease 4|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KKIETHKL 8
+K+ETHK+
Sbjct: 136 EKVETHKV 143


>sp|GMS_METOI|GMGT synthase|Methanothermococcus okinawensis (strain DSM 14208

Query: 1 KKIETHKLTF 10
KK++ HK+ F
Sbjct: 204 KKLKEHKVDF 213




139|Sequence|691|700|HKLTFRENAK

>sp|SPCS_METJA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KLTFRENAK 10
KLT +EN K
Sbjct: 18 KLTLKENLK 26


>sp|DAPAL_PYRNV|UNCHARACTERIZED DapA-like lyase Tneu_1812|Pyrobaculum neutrophilum (strain DSM

Query: 2 KLTFRENAK 10
KLTF E K
Sbjct: 50 KLTFEERVK 58


>sp|DAPAL_PYRIL|UNCHARACTERIZED DapA-like lyase Pisl_0309|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KLTFRENAK 10
KLTF E K
Sbjct: 50 KLTFEERVK 58




140|Sequence|696|705|RENAKAKTDH

>sp|CAS1B_SACS2|CRISPR-ASSOCIATED endonuclease Cas1 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ENAKAKTDH 10
EN K ++DH
Sbjct: 266 ENVKEESDH 274


>sp|R15PI_PYRFU|RIBOSE 1,5-bisphosphate isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ENAKAKTDH 10
E +KAKT H
Sbjct: 40 EKSKAKTSH 48




141|Sequence|701|710|AKTDHGAEIV

>sp|GUAAA_PYRFU|GMP synthase [glutamine-hydrolyzing] subunit A|Pyrococcus furiosus

Query: 1 AKTDHGAEIV 10
A T+HGA+I+
Sbjct: 169 AHTEHGADIL 178


>sp|TBP_PYRCJ|TATA-BOX-BINDING protein|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 DHGAEI 9
DHGAE+
Sbjct: 88 DHGAEV 93


>sp|TBP_PYRIL|TATA-BOX-BINDING protein|Pyrobaculum islandicum (strain DSM 4184

Query: 4 DHGAEI 9
DHGAE+
Sbjct: 88 DHGAEV 93


>sp|GUAAA_THEKO|GMP synthase [glutamine-hydrolyzing] subunit A|Thermococcus

Query: 1 AKTDHGAEI 9
A T+HGA+I
Sbjct: 169 AHTEHGADI 177


>sp|RIFK_CALMQ|RIBOFLAVIN kinase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 KTDHGAEIV 10
+T HG E++
Sbjct: 196 RTSHGPEVI 204


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KTDHGAEIV 10
K DH EIV
Sbjct: 202 KLDHNQEIV 210


>sp|GATA_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanothermobacter thermautotrophicus

Query: 1 AKTDHGAEIV 10
A D GAEIV
Sbjct: 280 AMEDEGAEIV 289


>sp|PYRE_PYRAB|OROTATE phosphoribosyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 4 DHGAEIV 10
+HGAE+V
Sbjct: 135 EHGAEVV 141


>sp|HIS5_METTH|IMIDAZOLE glycerol phosphate synthase subunit|Methanothermobacter

Query: 1 AKTDHGAEI 9
A+TD+G E+
Sbjct: 154 ARTDYGVEM 162


>sp|GLPA2_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A2|Haloferax volcanii

Query: 4 DHGAEI 9
DHGAE+
Sbjct: 487 DHGAEV 492


>sp|THIC_METKA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 AKTDHGAEIV 10
A DHGA+ V
Sbjct: 85 AAVDHGADTV 94


>sp|TIAS_METJA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocaldococcus jannaschii

Query: 2 KTDHGAEI 9
KT+HG ++
Sbjct: 250 KTNHGTDV 257




142|Sequence|706|715|GAEIVYKSPV

>sp|CBIA_METBF|COBYRINATE a,c-diamide synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GAEIVYKSPV 10
GAEIVY SPV
Sbjct: 294 GAEIVYFSPV 303


>sp|CBIA_METAC|COBYRINATE a,c-diamide synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GAEIVYKSPV 10
GAEIVY SPV
Sbjct: 297 GAEIVYFSPV 306


>sp|CBIA_PICTO|COBYRINATE a,c-diamide synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 GAEIVYKSPV 10
GAEIVY SP+
Sbjct: 271 GAEIVYFSPL 280


>sp|APGM_PYRIL|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GAEIVYKSPV 10
G EI+YKS V
Sbjct: 138 GVEIIYKSTV 147


>sp|CFBA_META3|SIROHYDROCHLORIN cobaltochelatase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GAEIVYKSPV 10
G EI+Y+ P+
Sbjct: 117 GVEIIYRDPM 126


>sp|APGM_PYRAR|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GAEIVYKSPV 10
G E+VYKS V
Sbjct: 138 GVEVVYKSTV 147


>sp|APGM_PYRCJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GAEIVYKSPV 10
G E+VYKS V
Sbjct: 138 GVEVVYKSTV 147


>sp|CBIA_THEVO|COBYRINATE a,c-diamide synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GAEIVYKSPV 10
GAE+V+ SP+
Sbjct: 268 GAELVFFSPL 277


>sp|CFBA_METMP|SIROHYDROCHLORIN cobaltochelatase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GAEIVYKSPV 10
G E+VY+ P+
Sbjct: 118 GVELVYRKPM 127


>sp|PROF_ODILC|ODIN profilin|Odinarchaeota yellowstonii (strain LCB_4)

Query: 2 AEIVYKSP 9
EI+Y+SP
Sbjct: 25 GEIIYQSP 32


>sp|QOXM_SULAC|QUINOL oxidase subunit 1/3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GAEIVYKSP 9
G EI YK+P
Sbjct: 327 GGEIRYKTP 335


>sp|RS34_SACS2|SMALL ribosomal subunit protein aS34|Saccharolobus solfataricus (strain

Query: 1 GAEIVYKSP 9
G +I+YK P
Sbjct: 31 GTDILYKCP 39


>sp|Y292_METBF|UPF0179 protein Mbar_A0292|Methanosarcina barkeri (strain Fusaro /

Query: 1 GAEIVYKSP 9
GA+I+Y+ P
Sbjct: 91 GAKIMYEPP 99


>sp|PELO_PYRCJ|PROTEIN pelota homolog|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GAEIVYKSP 9
GAEI+Y P
Sbjct: 150 GAEIMYTVP 158


>sp|ACD2_ARCFU|ACETATE--COA ligase [ADP-forming] II|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GAEIVYKSPV 10
G EIV+KS V
Sbjct: 48 GREIVHKSDV 57


>sp|TOP6B_PYRAE|TYPE 2 DNA topoisomerase 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 AEIVYKSP 9
AEIV+K P
Sbjct: 198 AEIVFKGP 205


>sp|AROB_SULTO|3-DEHYDROQUINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 EIVYKSPV 10
EI+YKS V
Sbjct: 206 EIIYKSSV 213


>sp|AMPD_AERPE|ANHYDROMEVALONATE phosphate decarboxylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GAEIVYKSPV 10
G+ VY+SPV
Sbjct: 209 GSMKVYRSPV 218


>sp|Y2784_METAR|UPF0179 protein UNCMA_27840|Methanocella arvoryzae (strain DSM 22066

Query: 1 GAEIVYKSP 9
G E +Y+ P
Sbjct: 19 GTEFIYRGP 27


>sp|Y1123_METJA|UNCHARACTERIZED protein MJ1123|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EIVYKSPV 10
EI+YKS +
Sbjct: 19 EIIYKSEI 26




143|Sequence|711|720|YKSPVVSGDT

>sp|THIL_METJA|THIAMINE-MONOPHOSPHATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YKSPVVSGDT 10
Y PVV GDT
Sbjct: 114 YDCPVVGGDT 123


>sp|Y1039_PYRHO|UNCHARACTERIZED ABC transporter extracellular-binding protein|Pyrococcus horikoshii

Query: 2 KSPVVSGDT 10
K+P+VSGD+
Sbjct: 197 KAPIVSGDS 205


>sp|THIL_PYRAB|THIAMINE-MONOPHOSPHATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 YKSPVVSGDT 10
YK +VSGDT
Sbjct: 110 YKLKIVSGDT 119


>sp|THIL_METTH|THIAMINE-MONOPHOSPHATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 YKSPVVSGDT 10
Y++P++ GDT
Sbjct: 119 YQAPLIGGDT 128


>sp|FTR_METBF|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YKSPVVSGD 9
YK P++ GD
Sbjct: 140 YKVPIMEGD 148


>sp|MTRA1_METRM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 1|Methanobrevibacter ruminantium

Query: 4 PVVSGD 9
PVVSGD
Sbjct: 12 PVVSGD 17


>sp|AROA_HALLT|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 2 KSPVVSGDT 10
+SP+VS DT
Sbjct: 39 RSPLVSADT 47


>sp|FTR_METAC|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YKSPVVSGD 9
YK P++ GD
Sbjct: 140 YKVPIMEGD 148


>sp|RNH_SULTO|RIBONUCLEASE HI|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 SPVVSGDT 10
SP++ GD+
Sbjct: 70 SPIIKGDS 77


>sp|AKSF_METJA|HOMOISOCITRATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YKSPVVS 7
YKSP+++
Sbjct: 79 YKSPIIT 85


>sp|MPTE_METJA|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YKSPVVSGD 9
YK+P++ D
Sbjct: 79 YKNPIIVAD 87


>sp|GLMS_AERPE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Aeropyrum pernix (strain ATCC 700893

Query: 1 YKSPVVSG 8
YKSP+V G
Sbjct: 179 YKSPLVVG 186


>sp|THIL_PYRHO|THIAMINE-MONOPHOSPHATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YKSPVVSGDT 10
Y +VSGDT
Sbjct: 109 YGVKIVSGDT 118


>sp|MTRA2_METRM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 2|Methanobrevibacter ruminantium

Query: 4 PVVSGD 9
PVVSGD
Sbjct: 12 PVVSGD 17


>sp|AROB_AERPE|3-DEHYDROQUINATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 YKSPVVSGD 9
YK VV+GD
Sbjct: 223 YKMQVVAGD 231


>sp|MUTS2_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 YKSPVVSGD 9
Y PV+ GD
Sbjct: 581 YTKPVMGGD 589


>sp|MUTS2_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 YKSPVVSGD 9
Y PV+ GD
Sbjct: 581 YTKPVMGGD 589




144|Sequence|716|725|VSGDTSPRHL

>sp|TREZ_SACSO|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (Sulfolobus

Query: 4 DTSPRHL 10
DTSP+H+
Sbjct: 260 DTSPKHI 266


>sp|HEM1_METMJ|GLUTAMYL-TRNA reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 DTSPRHL 10
DT PRHL
Sbjct: 264 DTHPRHL 270


>sp|DNLI2_HALWD|DNA ligase 2|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VSGDTSP 7
+SGDTSP
Sbjct: 222 ISGDTSP 228


>sp|Y123_PYRFU|UPF0146 protein PF0123|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VSGDTSPRHL 10
+SGD PR +
Sbjct: 108 LSGDVPPREM 117


>sp|Y181_METJA|UNCHARACTERIZED protein MJ0181|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 TSPRHL 10
T+PRHL
Sbjct: 46 TNPRHL 51


>sp|PURL_PYRAR|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VSGDTSPRH 9
V GD +PR+
Sbjct: 432 VKGDANPRY 440


>sp|PURL_PYRNV|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 VSGDTSPRH 9
V GD +PR+
Sbjct: 430 VKGDANPRY 438


>sp|PURL_PYRCJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VSGDTSPRH 9
V GD +PR+
Sbjct: 430 VKGDANPRY 438


>sp|Y3507_METJA|UNCHARACTERIZED protein MJECL07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VSGDTSP 7
+SGDT+P
Sbjct: 136 LSGDTNP 142


>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VSGDTSPRH 9
V GD +PR+
Sbjct: 430 VKGDANPRY 438


>sp|RNZ_NITMS|RIBONUCLEASE Z|Nitrosopumilus maritimus (strain SCM1)

Query: 1 VSGDTSP 7
+SGDT P
Sbjct: 204 ISGDTMP 210


>sp|CSG_HALGI|CELL surface glycoprotein|Haloferax gibbonsii

Query: 3 GDTSPRHL 10
GDT PR L
Sbjct: 722 GDTQPRFL 729




145|Sequence|721|730|SPRHLSNVSS

>sp|SYDND_NATPD|ASPARTATE--TRNA(ASP/ASN) ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SPRHLSNVSS 10
+PRHL+ +S
Sbjct: 217 TPRHLNEATS 226


>sp|SYDND_HALWD|ASPARTATE--TRNA(ASP/ASN) ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SPRHLSNVSS 10
+PRHL+ +S
Sbjct: 217 TPRHLNEATS 226


>sp|SYDND_HALVO|ASPARTATE--TRNA(ASP/ASN) ligase|Haloferax volcanii (Halobacterium volcanii)

Query: 1 SPRHLSNVSS 10
+PRHL+ +S
Sbjct: 217 TPRHLNEATS 226


>sp|SYDND_HALMA|ASPARTATE--TRNA(ASP/ASN) ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 SPRHLSNVSS 10
+PRHL+ +S
Sbjct: 217 TPRHLNEATS 226


>sp|LIPA_PYRAE|LIPOYL synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SPRHLSNV 8
SPRHL+ V
Sbjct: 233 SPRHLNPV 240


>sp|KUP_METAC|PROBABLE potassium transport system protein|Methanosarcina acetivorans

Query: 2 PRHLSNV 8
PR++SNV
Sbjct: 484 PRYISNV 490


>sp|COFC_METMA|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SPRHLSNVSS 10
SP H+ +SS
Sbjct: 99 SPEHIKEISS 108




146|Sequence|726|735|SNVSSTGSID

>sp|Y1513_METJA|UNCHARACTERIZED protein MJ1513|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SNVSSTGSID 10
S+VSSTG D
Sbjct: 282 SSVSSTGQSD 291




147|Sequence|731|740|TGSIDMVDSP

>sp|R1PKD_THEKO|ADP-DEPENDENT ribose-1-phosphate kinase|Thermococcus kodakarensis (strain ATCC

Query: 1 TGSIDMVDSP 10
TG ID+V+ P
Sbjct: 82 TGGIDVVEEP 91


>sp|SAT_CENSY|SULFATE adenylyltransferase|Cenarchaeum symbiosum (strain A)

Query: 2 GSIDMVDSP 10
G ID+VD P
Sbjct: 149 GRIDLVDRP 157


>sp|SYT_METTP|THREONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GSIDMVDSP 10
G +D+VD P
Sbjct: 399 GLVDIVDKP 407


>sp|SPSS2_ARCFU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GSIDMVDSP 10
G +D++D P
Sbjct: 51 GRVDLLDKP 59


>sp|ARGC_METJA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TGSIDMVDS 9
TG ID VD+
Sbjct: 61 TGDIDKVDA 69


>sp|FBPAP_METTM|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanothermobacter marburgensis (strain ATCC

Query: 2 GSIDMVDSP 10
G IDM D P
Sbjct: 305 GPIDMFDDP 313


>sp|KAD6_METMA|PUTATIVE adenylate kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GSIDMVDS 9
GS+D +DS
Sbjct: 187 GSLDWIDS 194


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 1 TGSIDMV 7
+GSIDMV
Sbjct: 982 SGSIDMV 988


>sp|KAD6_METAC|PUTATIVE adenylate kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GSIDMVDS 9
GS+D +DS
Sbjct: 177 GSLDWIDS 184


>sp|LYSZ_AERPE|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Aeropyrum pernix

Query: 1 TGSIDMVDS 9
TG I+ VDS
Sbjct: 138 TGKIERVDS 146




148|Sequence|736|745|MVDSPQLATL

>sp|HTRM_HALMA|PROBABLE sensory rhodopsin transducer|Haloarcula marismortui (strain ATCC

Query: 2 VDSPQLATL 10
VD PQLA L
Sbjct: 156 VDDPQLAEL 164


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 3 DSPQLATL 10
D PQ+ATL
Sbjct: 160 DRPQIATL 167


>sp|GPMI_HALMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Haloarcula marismortui (strain ATCC 43049

Query: 1 MVDSPQLAT 9
+VDSP +AT
Sbjct: 364 IVDSPDVAT 372


>sp|SYDND_HALSA|ASPARTATE--TRNA(ASP/ASN) ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 VDSPQLAT 9
VD+P+L+T
Sbjct: 158 VDTPELST 165




149|Sequence|741|750|QLATLADEVS

>sp|SYFA_METAR|PHENYLALANINE--TRNA ligase alpha subunit|Methanocella arvoryzae (strain DSM 22066

Query: 2 LATLADEV 9
LATL DEV
Sbjct: 47 LATLRDEV 54


>sp|MTAP_CENSY|S-METHYL-5'-THIOADENOSINE phosphorylase|Cenarchaeum symbiosum (strain A)

Query: 2 LATLADEV 9
LATLAD V
Sbjct: 202 LATLADNV 209




150|Sequence|746|758|ADEVSASLAKQGL

>sp|SAHH_SULAC|ADENOSYLHOMOCYSTEINASE acidocaldarius (strain ATCC 33909

Query: 2 DEVSASLAKQGL 13
D+V+A LAK G+
Sbjct: 82 DDVAAGLAKNGI 93


>sp|SAHH_PYRAB|ADENOSYLHOMOCYSTEINASE abyssi (strain GE5 /

Query: 2 DEVSASLAKQGL 13
D+V A+LAK+G+
Sbjct: 87 DDVVAALAKEGV 98


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ADEVSASLAKQGL 13
+DEV+ + K+GL
Sbjct: 214 SDEVAVQILKKGL 226


>sp|SIHH_METJA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DEVSASLAKQGL 13
D+V+A+ AK+G+
Sbjct: 81 DDVAAACAKKGM 92


>sp|SAHH_THEKO|ADENOSYLHOMOCYSTEINASE kodakarensis (strain ATCC BAA-918

Query: 2 DEVSASLAKQGL 13
D+V A+LAK G+
Sbjct: 86 DDVVAALAKAGV 97


>sp|SAHH_PYRFU|ADENOSYLHOMOCYSTEINASE furiosus (strain ATCC 43587

Query: 2 DEVSASLAKQGL 13
D+V A+LAK G+
Sbjct: 86 DDVVAALAKAGV 97


>sp|SAHH_PYRHO|ADENOSYLHOMOCYSTEINASE horikoshii (strain ATCC 700860

Query: 2 DEVSASLAKQGL 13
D+V A+LAK G+
Sbjct: 86 DDVVAALAKAGV 97


>sp|Y779_METS3|UPF0173 metal-dependent hydrolase Msm_0779|Methanobrevibacter smithii

Query: 3 EVSASLAKQGL 13
E+S L+KQG+
Sbjct: 74 EISLFLSKQGI 84


>sp|Y996_METST|UPF0179 protein Msp_0996|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 VSASLAKQGL 13
+ SLAK+GL
Sbjct: 5 IGTSLAKKGL 14


>sp|RPO1C_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus solfataricus (strain

Query: 3 EVSASLAKQGL 13
E+S LA+QGL
Sbjct: 293 EISKVLAEQGL 303


>sp|RAD50_THEKO|DNA double-strand break repair Rad50|Thermococcus kodakarensis (strain

Query: 2 DEVSASLAK 10
DEV ASL K
Sbjct: 692 DEVKASLEK 700


>sp|RPO1C_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus shibatae (strain ATCC

Query: 3 EVSASLAKQGL 13
E+S LA+QGL
Sbjct: 293 EISKVLAEQGL 303


>sp|RPO1C_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 3 EVSASLAKQGL 13
E+S LA+QGL
Sbjct: 293 EISKVLAEQGL 303


>sp|RPO1C_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 3 EVSASLAKQGL 13
E+S LA+QGL
Sbjct: 293 EISKVLAEQGL 303


>sp|RPO1C_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 3 EVSASLAKQGL 13
E+S LA+QGL
Sbjct: 293 EISKVLAEQGL 303


>sp|RPO1C_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 3 EVSASLAKQGL 13
E+S LA+QGL
Sbjct: 293 EISKVLAEQGL 303


>sp|RPO1C_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 3 EVSASLAKQGL 13
E+S LA+QGL
Sbjct: 293 EISKVLAEQGL 303


>sp|RPO1C_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 3 EVSASLAKQGL 13
E+S LA+QGL
Sbjct: 293 EISKVLAEQGL 303


>sp|FRHA_METBF|COENZYME F420 hydrogenase subunit alpha|Methanosarcina barkeri (strain

Query: 1 ADEVSASLAKQGL 13
A + A LAK+GL
Sbjct: 179 AKQKMADLAKEGL 191


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DEVSASLAKQG 12
DE++ +L+K G
Sbjct: 316 DEIATALSKSG 326


>sp|RPO1C_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DEVSASLAKQGL 13
DE+ +++ +QGL
Sbjct: 289 DEIVSTMQEQGL 300






THE END