1|Sequence|1|10|MGKSLSHLPL
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 MGKSLSHLP 9
MGK S LP
Sbjct: 438 MGKEASQLP 446
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 GKSLSH 7
GKSLSH
Sbjct: 148 GKSLSH 153
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 GKSLSHLP 9
GK+ HLP
Sbjct: 1671 GKTRKHLP 1678
>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 SLSHLPL 10
SL HLP+
Sbjct: 93 SLPHLPV 99
>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 SLSHLPL 10
SL HLP+
Sbjct: 93 SLPHLPV 99
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 6 SHLPL 10
SHLPL
Sbjct: 140 SHLPL 144
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 MGKSLSHLP 9
+GK S LP
Sbjct: 437 LGKEASQLP 445
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 MGKSLSHLP 9
+GK S LP
Sbjct: 437 LGKEASQLP 445
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 4 SLSHLPL 10
SL+H PL
Sbjct: 11 SLTHFPL 17
>sp|MATRX_PI2HT|MATRIX protein|Human parainfluenza 2 virus (strain
Query: 3 KSLSHLP 9
KSL H+P
Sbjct: 280 KSLGHIP 286
>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 4 SLSHLPL 10
S SH+PL
Sbjct: 663 STSHMPL 669
>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 SLSHLPL 10
S SH+PL
Sbjct: 663 STSHMPL 669
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 6 SHLPL 10
SHLPL
Sbjct: 140 SHLPL 144
2|Sequence|6|15|SHLPLHSSKE
>sp|PB2S1_I34A1|PB2-S1 A virus (strain A/Puerto
Query: 3 LPLHSSK 9
+PLH SK
Sbjct: 495 VPLHQSK 501
>sp|PB2S1_I18A0|PB2-S1 A virus (strain A/Brevig
Query: 3 LPLHSSK 9
+PLH SK
Sbjct: 494 VPLHQSK 500
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 1 SHLPLH 6
SHLP H
Sbjct: 284 SHLPSH 289
>sp|PB2S1_I33A0|PB2-S1 A virus (strain A/Wilson-Smith/1933
Query: 3 LPLHSSK 9
+PLH SK
Sbjct: 495 VPLHQSK 501
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 HLPLHSSK 9
+LP H+SK
Sbjct: 419 YLPAHASK 426
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 HLPLH 6
HLPLH
Sbjct: 436 HLPLH 440
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 HLPLHSS 8
HLPLH +
Sbjct: 436 HLPLHPA 442
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 2 HLPLHSS 8
HLPLH +
Sbjct: 436 HLPLHPA 442
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 HLPLH 6
HLPLH
Sbjct: 436 HLPLH 440
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 2 HLPLHSS 8
HLPLH +
Sbjct: 425 HLPLHPA 431
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 HLPLHSS 8
HLPLH +
Sbjct: 436 HLPLHPA 442
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 HLPLH 6
HLPLH
Sbjct: 436 HLPLH 440
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 HLPLH 6
HLPLH
Sbjct: 436 HLPLH 440
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 2 HLPLH 6
HLPLH
Sbjct: 436 HLPLH 440
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 HLPLH 6
HLPLH
Sbjct: 436 HLPLH 440
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 HLPLH 6
HLPLH
Sbjct: 436 HLPLH 440
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 HLPLH 6
HLPLH
Sbjct: 436 HLPLH 440
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 2 HLPLH 6
HLPLH
Sbjct: 435 HLPLH 439
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 2 HLPLHSS 8
HLPLH +
Sbjct: 425 HLPLHPA 431
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 HLPLHSS 8
HLPLH +
Sbjct: 436 HLPLHPA 442
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 HLPLHSS 8
HLPLH +
Sbjct: 436 HLPLHPA 442
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 HLPLHSS 8
HLPLH +
Sbjct: 436 HLPLHPA 442
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 2 HLPLH 6
HLPLH
Sbjct: 436 HLPLH 440
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 2 HLPLH 6
HLPLH
Sbjct: 436 HLPLH 440
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 2 HLPLHSS 8
HLPLH +
Sbjct: 435 HLPLHPA 441
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 2 HLPLH 6
HLPLH
Sbjct: 435 HLPLH 439
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 2 HLPLHSS 8
HLPLH +
Sbjct: 425 HLPLHPA 431
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 2 HLPLHSS 8
HLPLH +
Sbjct: 425 HLPLHPA 431
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 2 HLPLH 6
HLPLH
Sbjct: 425 HLPLH 429
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 2 HLPLHSS 8
HLPLH +
Sbjct: 436 HLPLHPA 442
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 2 HLPLHSS 8
HLPLH +
Sbjct: 425 HLPLHPA 431
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 2 HLPLH 6
HLPLH
Sbjct: 425 HLPLH 429
>sp|DR7_HHV6U|TRANSACTIVATOR protein DR7|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 HLPLH 6
HLP H
Sbjct: 3 HLPFH 7
3|Sequence|11|20|HSSKEDAYDG
>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 KEDAYDG 10
KED YDG
Sbjct: 167 KEDVYDG 173
>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 KEDAYDG 10
KED YDG
Sbjct: 167 KEDVYDG 173
>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 KEDAYDG 10
KED YDG
Sbjct: 167 KEDVYDG 173
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 SSKEDAYDG 10
SS ED DG
Sbjct: 1330 SSSEDGLDG 1338
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 3 SKEDAYDG 10
+K+D YDG
Sbjct: 437 TKKDPYDG 444
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 5 EDAYD 9
EDAYD
Sbjct: 219 EDAYD 223
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 5 EDAYD 9
EDAYD
Sbjct: 219 EDAYD 223
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 4 KEDAYDG 10
K+D YDG
Sbjct: 438 KKDPYDG 444
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 4 KEDAYDG 10
K+D YDG
Sbjct: 437 KKDPYDG 443
4|Sequence|16|25|DAYDGVTSEN
>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)
Query: 2 AYDGVTSEN 10
A DG+ +EN
Sbjct: 68 ASDGIVNEN 76
>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus
Query: 2 AYDGVTSEN 10
A DG+ +EN
Sbjct: 68 ASDGIVNEN 76
>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)
Query: 2 AYDGVTSEN 10
A DG+ +EN
Sbjct: 72 ASDGIVNEN 80
>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 AYDGVTSEN 10
A DG+ +EN
Sbjct: 68 ASDGIVNEN 76
>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)
Query: 2 AYDGVTSEN 10
A DG+ +EN
Sbjct: 68 ASDGIVNEN 76
>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate
Query: 2 AYDGVTSEN 10
A DG+ +EN
Sbjct: 68 ASDGIVNEN 76
>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 AYDGVTSEN 10
A DG+ +EN
Sbjct: 68 ASDGIVNEN 76
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 5 GVTSEN 10
GVT+EN
Sbjct: 2108 GVTAEN 2113
>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976
Query: 1 DAYDGVTSE 9
+A DG+TS+
Sbjct: 387 NAIDGITSK 395
>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)
Query: 1 DAYDGVTSE 9
D YDG+ ++
Sbjct: 451 DKYDGIITK 459
>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DAYDGVTSE 9
D YDG+ ++
Sbjct: 451 DKYDGIITK 459
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 YDGVTSEN 10
Y G TSE+
Sbjct: 1979 YGGATSED 1986
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 YDGVTSEN 10
Y G TSE+
Sbjct: 1979 YGGATSED 1986
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 YDGVTSEN 10
Y G TSE+
Sbjct: 1979 YGGATSED 1986
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 YDGVTSEN 10
Y G TSE+
Sbjct: 1979 YGGATSED 1986
5|Sequence|21|30|VTSENMRNGL
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 SENMRNGL 10
+EN+RN L
Sbjct: 11 TENLRNAL 18
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 SENMRNGL 10
+EN+RN L
Sbjct: 11 TENLRNAL 18
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 SENMRNGL 10
+EN+RN L
Sbjct: 11 TENLRNAL 18
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 VTSENMRNG 9
+TSE +R+G
Sbjct: 47 ITSERVRDG 55
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 VTSENMRNG 9
+TSE +R+G
Sbjct: 47 ITSERVRDG 55
>sp|HEMA_I60A0|HEMAGGLUTININ A virus (strain A/Ann
Query: 4 ENMRNGL 10
EN RNGL
Sbjct: 98 ENPRNGL 104
6|Sequence|26|35|MRNGLVNSEV
>sp|MATRX_RABVR|MATRIX protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 MRNGLVNSEV 10
MRN VN EV
Sbjct: 50 MRNFCVNGEV 59
>sp|MATRX_RABVB|MATRIX protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 MRNGLVNSEV 10
MRN VN EV
Sbjct: 50 MRNFCVNGEV 59
>sp|MATRX_RABVD|MATRIX protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 MRNGLVNSEV 10
MRN +N EV
Sbjct: 50 MRNFCINGEV 59
>sp|MATRX_RABVH|MATRIX protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 MRNGLVNSEV 10
MRN +N EV
Sbjct: 50 MRNFCINGEV 59
>sp|MATRX_RABVN|MATRIX protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 MRNGLVNSEV 10
MRN +N EV
Sbjct: 50 MRNFCINGEV 59
>sp|MATRX_RABVC|MATRIX protein|Rabies virus (strain CVS-11) (RABV)
Query: 1 MRNGLVNSEV 10
MRN VN EV
Sbjct: 50 MRNFCVNGEV 59
>sp|MATRX_ABLVH|MATRIX protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 MRNGLVNSEV 10
MRN +N EV
Sbjct: 50 MRNFCINGEV 59
>sp|MATRX_RABVI|MATRIX protein|Rabies virus (strain India) (RABV)
Query: 1 MRNGLVNSEV 10
MRN +N EV
Sbjct: 50 MRNFCINGEV 59
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 MRNGLVNSE 9
+R+GL NS+
Sbjct: 580 VRDGLFNSQ 588
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 MRNGLVNSE 9
+R+GL NS+
Sbjct: 580 VRDGLFNSQ 588
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 MRNGLVNSE 9
+R+GL NS+
Sbjct: 580 VRDGLFNSQ 588
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 MRNGLVNS 8
+RNG+++S
Sbjct: 122 LRNGIISS 129
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 MRNGLVNS 8
+RNG+++S
Sbjct: 122 LRNGIISS 129
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 MRNGLVNS 8
+RNG+++S
Sbjct: 122 LRNGIISS 129
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 NGLVNSEV 10
+GL+N+E+
Sbjct: 449 DGLINTEI 456
>sp|MATRX_ABLVB|MATRIX protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 MRNGLVNSEV 10
MRN +N EV
Sbjct: 60 MRNLCINGEV 69
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 1 MRNGLVNS 8
MRN L+N+
Sbjct: 515 MRNVLINA 522
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 MRNGLVNSE 9
M++GL NS+
Sbjct: 959 MKHGLRNSQ 967
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 MRNGLVNSE 9
M++GL NS+
Sbjct: 961 MKHGLRNSQ 969
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 1 MRNGLVNSE 9
M++GL NS+
Sbjct: 954 MKHGLRNSQ 962
7|Sequence|31|40|VNSEVHNEDG
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 SEVHNEDG 10
+E HNE G
Sbjct: 385 AEYHNESG 392
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 SEVHNEDG 10
+E HNE G
Sbjct: 385 AEYHNESG 392
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 VNSEVHNED 9
+NS VH++D
Sbjct: 1157 INSMVHSDD 1165
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 VNSEVHNED 9
VNS VH++D
Sbjct: 1180 VNSLVHSDD 1188
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 VNSEVHNED 9
VNS VH++D
Sbjct: 1180 VNSLVHSDD 1188
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 VNSEVHNE 8
++SEVHN+
Sbjct: 834 LSSEVHND 841
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 4 EVHNED 9
EV+NED
Sbjct: 983 EVYNED 988
>sp|PG047_MONPV|IMMUNE evasion protein OPG047|Monkeypox virus (MPXV)
Query: 1 VNSEVHN 7
+N+E+HN
Sbjct: 281 MNNEIHN 287
>sp|PG047_VACCC|IMMUNE evasion protein OPG047|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VNSEVHN 7
+N+E+HN
Sbjct: 281 MNNEIHN 287
>sp|PG047_VACCA|IMMUNE evasion protein OPG047|Vaccinia virus (strain Ankara) (VACV)
Query: 1 VNSEVHN 7
+N+E+HN
Sbjct: 277 MNNEIHN 283
>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain
Query: 1 VNSEVHNED 9
VN+E+H D
Sbjct: 568 VNAELHLHD 576
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 5 VHNEDG 10
+HN+DG
Sbjct: 548 MHNQDG 553
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 5 VHNEDG 10
+HN+DG
Sbjct: 548 MHNQDG 553
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 5 VHNEDG 10
+HN+DG
Sbjct: 548 MHNQDG 553
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 6 HNEDG 10
HN+DG
Sbjct: 1063 HNKDG 1067
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 6 HNEDG 10
HN+DG
Sbjct: 1063 HNKDG 1067
8|Sequence|36|45|HNEDGRNGDV
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 1 HNEDGRNGD 9
H E+G NG+
Sbjct: 580 HEEEGENGE 588
>sp|NEC1_HCMVA|NUCLEAR egress protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HNEDGR 6
H EDGR
Sbjct: 193 HAEDGR 198
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 1 HNEDGRNGD 9
H E G NG+
Sbjct: 518 HEEIGENGE 526
>sp|PG031_VACCC|PROTEIN C4|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 NEDGRN 7
N+DGRN
Sbjct: 242 NDDGRN 247
>sp|PG031_MONPV|PROTEIN OPG031|Monkeypox virus (MPXV)
Query: 2 NEDGRN 7
N+DGRN
Sbjct: 242 NDDGRN 247
>sp|PG031_VAR67|PROTEIN C4|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 NEDGRN 7
N+DGRN
Sbjct: 242 NDDGRN 247
>sp|PG135_VACCC|VIRION membrane protein OPG135|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 NEDGRNGD 9
N DG N D
Sbjct: 78 NNDGSNND 85
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 4 DGRNGD 9
DG+NGD
Sbjct: 148 DGQNGD 153
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 5 GRNGDV 10
GR GDV
Sbjct: 695 GRGGDV 700
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 HNEDG 5
HN+DG
Sbjct: 1063 HNKDG 1067
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 HNEDG 5
HN+DG
Sbjct: 1063 HNKDG 1067
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 1 HNEDGRNGD 9
E+G NG+
Sbjct: 584 QEEEGENGE 592
9|Sequence|41|50|RNGDVSQFPY
>sp|VP11_CTFVL|UNCHARACTERIZED protein VP11|Colorado tick fever virus (strain
Query: 2 NGDVSQFPY 10
+GD++QF Y
Sbjct: 89 SGDITQFVY 97
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 3 GDVSQFP 9
GDVS FP
Sbjct: 661 GDVSTFP 667
>sp|PHOSP_PI4HA|PHOSPHOPROTEIN parainfluenza 4a virus (strain
Query: 2 NGDVSQF 8
NGDVS+F
Sbjct: 311 NGDVSKF 317
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 2 NGDVSQF 8
NGDVS+F
Sbjct: 130 NGDVSRF 136
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 2 NGDVSQF 8
NGDVS+F
Sbjct: 130 NGDVSRF 136
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 4 DVSQFP 9
D+SQFP
Sbjct: 459 DLSQFP 464
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 4 DVSQFP 9
D+SQFP
Sbjct: 457 DLSQFP 462
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 4 DVSQFP 9
D+SQFP
Sbjct: 487 DLSQFP 492
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 RNGDVSQFP 9
R ++SQFP
Sbjct: 589 RPPEISQFP 597
Query: 3 GDVSQFPY 10
GD++ F Y
Sbjct: 1229 GDITHFKY 1236
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 4 DVSQFP 9
D+SQFP
Sbjct: 486 DLSQFP 491
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 4 DVSQFP 9
+VSQFP
Sbjct: 571 EVSQFP 576
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 RNGDVSQFP 9
R ++SQFP
Sbjct: 589 RPPEISQFP 597
Query: 3 GDVSQFPY 10
GD++ F Y
Sbjct: 1229 GDITHFKY 1236
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 4 DVSQFP 9
+VSQFP
Sbjct: 571 EVSQFP 576
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 NGDVSQFP 9
+GDV +FP
Sbjct: 310 SGDVVRFP 317
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 VSQFPY 10
VSQFP+
Sbjct: 847 VSQFPH 852
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 VSQFPY 10
VSQFP+
Sbjct: 917 VSQFPH 922
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 GDVSQFPY 10
GD++ F Y
Sbjct: 1229 GDITHFKY 1236
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 RNGDVSQFP 9
R ++SQFP
Sbjct: 589 RPPEISQFP 597
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 RNGDVSQFP 9
R ++SQFP
Sbjct: 589 RPPEISQFP 597
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 RNGDVSQFP 9
R ++SQFP
Sbjct: 589 RPPEISQFP 597
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 VSQFPY 10
VSQFP+
Sbjct: 864 VSQFPH 869
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 4 DVSQFP 9
+VSQFP
Sbjct: 571 EVSQFP 576
>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 4 DVSQFP 9
+VSQFP
Sbjct: 571 EVSQFP 576
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 RNGDVSQFP 9
R GD+S+ P
Sbjct: 217 RRGDLSKSP 225
>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 RNGDVSQFP 9
R GD+S+ P
Sbjct: 217 RRGDLSKSP 225
>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 RNGDVSQFP 9
R GD+S+ P
Sbjct: 217 RRGDLSKSP 225
>sp|PHOSP_PI4HB|PHOSPHOPROTEIN parainfluenza 4b virus (strain
Query: 3 GDVSQF 8
GDVS+F
Sbjct: 312 GDVSKF 317
>sp|U8_HHV6U|PROTEIN U8|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 NGDVSQFPY 10
N DV + PY
Sbjct: 164 NNDVLRSPY 172
10|Sequence|46|55|SQFPYVEFTG
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SQFPYVE 7
SQ PY+E
Sbjct: 1713 SQLPYIE 1719
>sp|VP11_CTFVL|UNCHARACTERIZED protein VP11|Colorado tick fever virus (strain
Query: 1 SQFPYVEFTG 10
+QF Y +F G
Sbjct: 93 TQFVYRQFRG 102
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PYVEFTG 10
PYV F G
Sbjct: 126 PYVVFMG 132
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PYVEFTG 10
PYV F G
Sbjct: 126 PYVVFMG 132
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 1 SQFPYVEF 8
S +PY EF
Sbjct: 280 SVYPYDEF 287
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 1 SQFPYVEF 8
S +PY EF
Sbjct: 279 SVYPYDEF 286
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 1 SQFPYVEF 8
S +PY EF
Sbjct: 280 SVYPYDEF 287
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 PYVEFTG 10
PYV TG
Sbjct: 558 PYVVLTG 564
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 1 SQFPYVEF 8
S +PY EF
Sbjct: 280 SVYPYDEF 287
11|Sequence|51|60|VEFTGRDSVT
>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)
Query: 2 EFTGRDSVT 10
EF G+D+VT
Sbjct: 21 EFQGKDNVT 29
>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus
Query: 1 VEFTGRDSVT 10
+EFT RD+ T
Sbjct: 193 IEFTPRDNET 202
>sp|MCEL_VAR67|MRNA-CAPPING enzyme catalytic subunit|Variola virus (isolate
Query: 1 VEFTGRDSVT 10
+EFT RD+ T
Sbjct: 193 IEFTPRDNET 202
>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)
Query: 1 VEFTGRDSVT 10
+EFT RD+ T
Sbjct: 193 IEFTPRDNET 202
>sp|NCAP_NIPAV|NUCLEOPROTEIN virus
Query: 1 VEFTGRDSVT 10
+E +GR SVT
Sbjct: 436 IEQSGRQSVT 445
>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 VEFTGRDS 8
+EFT RD+
Sbjct: 193 IEFTPRDN 200
>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 1 VEFTGRDS 8
+EFT RD+
Sbjct: 193 IEFTPRDN 200
>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 1 VEFTGRDS 8
+EFT RD+
Sbjct: 193 IEFTPRDN 200
>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VEFTGRDS 8
+EFT RD+
Sbjct: 193 IEFTPRDN 200
>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 1 VEFTGRDS 8
+EFT RD+
Sbjct: 193 IEFTPRDN 200
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 3 FTGRDSV 9
F GRD+V
Sbjct: 264 FDGRDAV 270
12|Sequence|56|65|RDSVTCPTCQ
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 1 RDSVTCPTC 9
RD+V+C C
Sbjct: 576 RDNVSCSIC 584
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 1 RDSVTCPTC 9
RD+V+C C
Sbjct: 569 RDNVSCSIC 577
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 1 RDSVTCPTC 9
RD+V+C C
Sbjct: 576 RDNVSCSIC 584
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 1 RDSVTCPTC 9
RD+V+C C
Sbjct: 574 RDNVSCSIC 582
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 1 RDSVTCPTC 9
RD+V+C C
Sbjct: 575 RDNVSCSIC 583
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 1 RDSVTCPTC 9
RD+V+C C
Sbjct: 574 RDNVSCSIC 582
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 RDSVTCPTC 9
RD+V+C C
Sbjct: 566 RDNVSCSIC 574
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 1 RDSVTCPTC 9
RD+V+C C
Sbjct: 569 RDNVSCSIC 577
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 1 RDSVTCPTC 9
RD+V+C C
Sbjct: 567 RDNVSCSIC 575
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 1 RDSVTCPTC 9
RD+V+C C
Sbjct: 574 RDNVSCSIC 582
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 1 RDSVTCPTC 9
RD+V+C C
Sbjct: 566 RDNVSCSIC 574
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 DSVTCP 7
D+VTCP
Sbjct: 2973 DTVTCP 2978
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 1 RDSVTCPTC 9
RD+V+C C
Sbjct: 565 RDNVSCSIC 573
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 DSVTCP 7
D+VTCP
Sbjct: 2973 DTVTCP 2978
>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus
Query: 2 DSVTCPT 8
D+ TCPT
Sbjct: 413 DNTTCPT 419
>sp|PG190_VACCC|PROTEIN OPG190|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RDSVTCPTCQ 10
D+VTCP +
Sbjct: 120 NDTVTCPNAE 129
>sp|PG190_VACCA|PROTEIN OPG190|Vaccinia virus (strain Ankara) (VACV)
Query: 1 RDSVTCPTCQ 10
D+VTCP +
Sbjct: 120 NDTVTCPNAE 129
>sp|GLRX1_MONPV|GLUTAREDOXIN-1 virus (MPXV)
Query: 5 TCPTCQ 10
TCP C+
Sbjct: 22 TCPFCR 27
>sp|PG190_VACCT|PROTEIN OPG190|Vaccinia virus (strain Tian Tan)
Query: 1 RDSVTCPTCQ 10
D+VTCP +
Sbjct: 120 NDTVTCPNAE 129
>sp|PG190_MONPV|PROTEIN OPG190|Monkeypox virus (MPXV)
Query: 1 RDSVTCPTCQ 10
D+VTCP +
Sbjct: 120 NDTVTCPNAE 129
>sp|PG190_VACC0|PROTEIN OPG190|Vaccinia virus (strain LC16m0) (VACV)
Query: 1 RDSVTCPTCQ 10
D+VTCP +
Sbjct: 120 NDTVTCPNAE 129
>sp|PG190_VACCL|PROTEIN OPG190|Vaccinia virus (strain Lister) (VACV)
Query: 1 RDSVTCPTCQ 10
D+VTCP +
Sbjct: 120 NDTVTCPNAE 129
>sp|GLRX1_CWPXG|GLUTAREDOXIN-1 virus (strain GRI-90 /
Query: 5 TCPTCQ 10
TCP C+
Sbjct: 22 TCPFCR 27
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 SVTCPTCQ 10
S CP CQ
Sbjct: 50 SFPCPFCQ 57
Query: 1 RDSVTCPT 8
RDS+ PT
Sbjct: 1613 RDSIWTPT 1620
>sp|GLRX1_VARV|GLUTAREDOXIN-1 virus
Query: 5 TCPTCQ 10
TCP C+
Sbjct: 22 TCPFCR 27
>sp|GLRX1_VAR67|GLUTAREDOXIN-1 virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 TCPTCQ 10
TCP C+
Sbjct: 22 TCPFCR 27
>sp|GLRX1_VACCT|GLUTAREDOXIN-1 virus (strain Tian Tan)
Query: 5 TCPTCQ 10
TCP C+
Sbjct: 22 TCPFCR 27
>sp|GLRX1_VACCP|GLUTAREDOXIN-1 virus (strain L-IVP) (VACV)
Query: 5 TCPTCQ 10
TCP C+
Sbjct: 22 TCPFCR 27
>sp|GLRX1_VACCC|GLUTAREDOXIN-1 virus (strain Copenhagen) (VACV)
Query: 5 TCPTCQ 10
TCP C+
Sbjct: 22 TCPFCR 27
>sp|GLRX1_VACCA|GLUTAREDOXIN-1 virus (strain Ankara) (VACV)
Query: 5 TCPTCQ 10
TCP C+
Sbjct: 22 TCPFCR 27
>sp|GLRX1_CWPXB|GLUTAREDOXIN-1 virus (strain Brighton Red)
Query: 5 TCPTCQ 10
TCP C+
Sbjct: 22 TCPFCR 27
>sp|M1_I68A5|MATRIX protein 1|Influenza A virus (strain A/Korea/426/1968
Query: 3 SVTCPTCQ 10
+V C TC+
Sbjct: 145 AVVCATCE 152
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 6 CPTCQ 10
CP CQ
Sbjct: 370 CPACQ 374
>sp|VE7_HPV66|PROTEIN E7|Human papillomavirus 66
Query: 3 SVTCPTC 9
+VTCP C
Sbjct: 95 TVTCPLC 101
>sp|VE7_HPV56|PROTEIN E7|Human papillomavirus 56
Query: 3 SVTCPTC 9
+VTCP C
Sbjct: 95 TVTCPLC 101
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 RDSVTCPTCQ 10
RDSV TC+
Sbjct: 241 RDSVWTGTCR 250
>sp|U8_HHV6U|PROTEIN U8|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 RDSVTCPTCQ 10
RDSV TC+
Sbjct: 241 RDSVWTGTCR 250
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 4 VTCPTC 9
+ CP C
Sbjct: 451 IMCPNC 456
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 5 TCPTCQ 10
TC TCQ
Sbjct: 1198 TCHTCQ 1203
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 4 VTCPTCQ 10
+ CP+CQ
Sbjct: 1076 LRCPSCQ 1082
>sp|VU8_HHV6Z|PROTEIN U8|Human herpesvirus 6B (strain Z29)
Query: 1 RDSVTCPTCQ 10
RDSV TC+
Sbjct: 296 RDSVWIGTCR 305
>sp|VE7_HPV33|PROTEIN E7|Human papillomavirus 33
Query: 3 SVTCPTC 9
++ CPTC
Sbjct: 88 NIVCPTC 94
>sp|HBEAG_HBVA9|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 3 SVTCPTCQ 10
S TCPT Q
Sbjct: 11 SCTCPTLQ 18
>sp|VE7_HPV54|PROTEIN E7|Human papillomavirus type 54
Query: 4 VTCPTC 9
+ CPTC
Sbjct: 86 IVCPTC 91
>sp|HBEAG_HBVA4|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 3 SVTCPTCQ 10
S TCPT Q
Sbjct: 11 SCTCPTVQ 18
>sp|HBEAG_HBVA6|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 3 SVTCPTCQ 10
S TCPT Q
Sbjct: 11 SCTCPTVQ 18
>sp|HBEAG_HBVD6|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 3 SVTCPTCQ 10
S TCPT Q
Sbjct: 11 SCTCPTVQ 18
>sp|HBEAG_HBVA3|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 3 SVTCPTCQ 10
S TCPT Q
Sbjct: 11 SCTCPTVQ 18
>sp|HBEAG_HBVA2|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 3 SVTCPTCQ 10
S TCPT Q
Sbjct: 11 SCTCPTVQ 18
>sp|HBEAG_HBVA7|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 3 SVTCPTCQ 10
S TCPT Q
Sbjct: 11 SCTCPTVQ 18
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 1 RDSVTCP 7
RD+ +CP
Sbjct: 162 RDNTSCP 168
Query: 2 DSVTCP 7
+S+TCP
Sbjct: 2831 NSITCP 2836
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 RDSVTCP 7
RD+ +CP
Sbjct: 162 RDNTSCP 168
Query: 2 DSVTCP 7
+S+TCP
Sbjct: 2831 NSITCP 2836
>sp|HBEAG_HBVA8|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 3 SVTCPTCQ 10
S TCPT Q
Sbjct: 11 SCTCPTIQ 18
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 6 CPTCQ 10
CP CQ
Sbjct: 370 CPACQ 374
>sp|VE7_HPV61|PROTEIN E7|Human papillomavirus type 61
Query: 3 SVTCPTC 9
S+ CP C
Sbjct: 88 SIVCPGC 94
13|Sequence|61|70|CPTCQGTGRI
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 CPTCQ 5
CP+CQ
Sbjct: 1078 CPSCQ 1082
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 TCQGTG 8
TCQG G
Sbjct: 349 TCQGVG 354
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CPTCQ 5
CP CQ
Sbjct: 370 CPACQ 374
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 CPTCQ 5
CP CQ
Sbjct: 370 CPACQ 374
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 CPTCQGTG 8
CP GTG
Sbjct: 284 CPLAGGTG 291
>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 CQGTGR 9
CQ TGR
Sbjct: 394 CQTTGR 399
>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus
Query: 4 CQGTGR 9
CQ TGR
Sbjct: 394 CQTTGR 399
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 1 CPTCQGTGRI 10
CP TGR+
Sbjct: 183 CPDLAPTGRV 192
>sp|VE7_HPV37|PROTEIN E7|Human papillomavirus 37
Query: 1 CPTCQGTGR 9
CP C+G R
Sbjct: 84 CPNCRGKLR 92
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 CPTCQ 5
CP CQ
Sbjct: 53 CPFCQ 57
>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 3 TCQGTGRI 10
TCQG+ I
Sbjct: 460 TCQGSDDI 467
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CPTCQGTG 8
CP C+ G
Sbjct: 357 CPLCESLG 364
>sp|YVCA_VACCC|UNCHARACTERIZED 8.0 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PTCQGTGR 9
PT GT R
Sbjct: 8 PTMSGTSR 15
>sp|VE7_HPV09|PROTEIN E7|Human papillomavirus 9
Query: 1 CPTCQGTGR 9
CP C+G R
Sbjct: 83 CPECRGRLR 91
>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 CPTCQGTG 8
C TC G G
Sbjct: 210 CVTCYGAG 217
>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CPTCQGTG 8
C TC G G
Sbjct: 210 CVTCYGAG 217
>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 CPTCQGTG 8
C TC G G
Sbjct: 210 CVTCYGAG 217
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PTCQGTGRI 10
P C GT +
Sbjct: 470 PNCVGTASV 478
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 PTCQGTGRI 10
PT Q GR+
Sbjct: 204 PTMQQLGRV 212
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 TCQGTG 8
TCQG G
Sbjct: 349 TCQGVG 354
>sp|VE7_HPV41|PROTEIN E7|Human papillomavirus type 41
Query: 1 CPTCQGTGR 9
CP CQ R
Sbjct: 62 CPFCQAIIR 70
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 PTCQGTGRI 10
PT Q GR+
Sbjct: 186 PTMQQLGRV 194
14|Sequence|66|75|GTGRIPRGQE
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 TGRIPRGQ 9
+GR+PRG+
Sbjct: 561 SGRLPRGE 568
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 TGRIPRGQ 9
+GR+PRG+
Sbjct: 560 SGRLPRGE 567
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 TGRIPRGQ 9
+GR+PRG+
Sbjct: 559 SGRLPRGE 566
>sp|FUS_PI1HC|FUSION glycoprotein F0|Human parainfluenza 1 virus (strain
Query: 1 GTGRIPRGQE 10
GT RIP Q+
Sbjct: 398 GTNRIPVNQD 407
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 TGRIPRGQ 9
+G++PRG+
Sbjct: 561 SGKLPRGE 568
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 TGRIPRGQ 9
+G++PRG+
Sbjct: 561 SGKLPRGE 568
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 1 GTGRIPR 7
GTG IPR
Sbjct: 582 GTGIIPR 588
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GTGRIPR 7
GTG IPR
Sbjct: 582 GTGIIPR 588
>sp|VP7_ROTGA|OUTER capsid glycoprotein VP7|Rotavirus B (isolate
Query: 4 RIPRGQE 10
++PRG+E
Sbjct: 118 KLPRGEE 124
>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12
Query: 5 IPRGQE 10
+PRGQE
Sbjct: 162 VPRGQE 167
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 3 GRIPRG 8
GRIP G
Sbjct: 224 GRIPNG 229
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GRIPRGQE 10
GR+P G E
Sbjct: 56 GRVPSGDE 63
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 5 IPRGQE 10
+PRGQE
Sbjct: 154 VPRGQE 159
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 5 IPRGQE 10
+PRGQE
Sbjct: 154 VPRGQE 159
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TGRIPRGQE 10
TGR P G E
Sbjct: 55 TGRAPGGDE 63
>sp|UL87_HHV7J|PROTEIN U58|Human herpesvirus 7 (strain JI)
Query: 1 GTGRIPR 7
GTG IP+
Sbjct: 573 GTGIIPK 579
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 GTGRIPRG 8
G GR+P G
Sbjct: 29 GPGRLPNG 36
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GTGRIPR 7
G GRIP+
Sbjct: 240 GPGRIPQ 246
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 GTGRIPRG 8
G GR+P G
Sbjct: 29 GPGRLPNG 36
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 3 GRIPRGQ 9
GR+P G+
Sbjct: 893 GRVPMGE 899
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 3 GRIPRGQ 9
GR+P G+
Sbjct: 893 GRVPMGE 899
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 3 GRIPRGQ 9
GR+P G+
Sbjct: 893 GRVPMGE 899
>sp|NCAP_SARS|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 4 RIPRGQ 9
R PRGQ
Sbjct: 66 RFPRGQ 71
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 1 GTGRIPRGQE 10
G GR P +E
Sbjct: 597 GVGRFPNEKE 606
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 1 GTGRIPRGQE 10
G GR P +E
Sbjct: 597 GVGRFPNEKE 606
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 GRIPRG 8
GR+P+G
Sbjct: 1188 GRLPQG 1193
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 GTGRIPR 7
G GR+P+
Sbjct: 240 GPGRVPQ 246
15|Sequence|71|80|PRGQENQLVA
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 PRGQENQLV 9
P+GQE+ L+
Sbjct: 549 PKGQESCLI 557
>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12
Query: 1 PRGQEN 6
PRGQE+
Sbjct: 163 PRGQED 168
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 1 PRGQEN 6
PRGQE+
Sbjct: 155 PRGQED 160
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 1 PRGQEN 6
PRGQE+
Sbjct: 155 PRGQED 160
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 PRGQENQLV 9
PR QE++ V
Sbjct: 208 PRSQESKCV 216
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 PRGQENQLV 9
PR QE++ V
Sbjct: 209 PRSQESKCV 217
>sp|CVC1_HHV8P|CAPSID vertex component 1|Human herpesvirus 8 type P
Query: 3 GQENQLVA 10
G+ENQL +
Sbjct: 67 GEENQLAS 74
>sp|US10_HHV2H|VIRION protein US10|Human herpesvirus 2 (strain HG52)
Query: 3 GQENQLV 9
GQE QLV
Sbjct: 204 GQEAQLV 210
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 RGQENQ 7
+GQENQ
Sbjct: 470 KGQENQ 475
16|Sequence|76|85|NQLVALIPYS
>sp|UL34_HCMVM|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NQLVALIPY 9
+QLVAL+P+
Sbjct: 174 HQLVALLPH 182
>sp|UL34_HCMVA|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NQLVALIPY 9
+QLVAL+P+
Sbjct: 174 HQLVALLPH 182
>sp|UL34_HCMVT|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 NQLVALIPY 9
+QLVAL+P+
Sbjct: 174 HQLVALLPH 182
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 NQLVALIPYS 10
NQ+ +IPY+
Sbjct: 824 NQISFVIPYT 833
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 NQLVALIPYS 10
NQ+ ++PY+
Sbjct: 806 NQISFVVPYN 815
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 NQLVALIPYS 10
NQ+ ++PY+
Sbjct: 806 NQISFVVPYN 815
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 NQLVALIPYS 10
NQ+ ++PY+
Sbjct: 806 NQISFVVPYN 815
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 NQLVALIPYS 10
NQ+ ++PY+
Sbjct: 806 NQISFVVPYN 815
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 NQLVALIPYS 10
NQ+ ++PY+
Sbjct: 804 NQISFVVPYN 813
>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)
Query: 1 NQLVALIPY 9
+ +VAL PY
Sbjct: 694 SSVVALAPY 702
17|Sequence|81|90|LIPYSDQRLR
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 LIPYSDQRLR 10
LIP++ +RLR
Sbjct: 1965 LIPFAAERLR 1974
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 LIPYSDQRLR 10
LIP++ +RLR
Sbjct: 1963 LIPFAAERLR 1972
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 LIPYSDQRLR 10
LIPY+ RL+
Sbjct: 1965 LIPYAADRLK 1974
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 1 LIPYSDQRLR 10
LIPY+ RL+
Sbjct: 1965 LIPYAADRLK 1974
>sp|VU25_HHV7J|PROTEIN U25|Human herpesvirus 7 (strain JI)
Query: 1 LIPYSDQRL 9
+ PY+DQ L
Sbjct: 183 MTPYTDQDL 191
>sp|PRO_ADE12|PROTEASE adenovirus A serotype 12
Query: 4 YSDQRLR 10
+SDQRL+
Sbjct: 75 FSDQRLK 81
>sp|PRO_ADE05|PROTEASE adenovirus C serotype 5
Query: 4 YSDQRLR 10
+SDQRL+
Sbjct: 75 FSDQRLK 81
>sp|PRO_ADE04|PROTEASE adenovirus E serotype 4
Query: 4 YSDQRLR 10
+SDQRL+
Sbjct: 77 FSDQRLK 83
>sp|PRO_ADE02|PROTEASE adenovirus C serotype 2
Query: 4 YSDQRLR 10
+SDQRL+
Sbjct: 75 FSDQRLK 81
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 LIPYSDQRL 9
LIP++ +RL
Sbjct: 1966 LIPFAAERL 1974
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 LIPYSDQR 8
L+PYS+ R
Sbjct: 1177 LLPYSESR 1184
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 LIPYSDQR 8
L+PYS+ R
Sbjct: 1177 LLPYSESR 1184
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 IPYSDQ 7
IPYS+Q
Sbjct: 1738 IPYSEQ 1743
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 LIPYSDQR 8
L+PYS R
Sbjct: 1167 LVPYSQSR 1174
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 LIPYSDQRL 9
++P+SD+ L
Sbjct: 75 ILPFSDRPL 83
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 LIPYSDQRL 9
++P+SD+ L
Sbjct: 75 ILPFSDRPL 83
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 LIPYSDQ 7
L PY DQ
Sbjct: 1261 LTPYQDQ 1267
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 1 LIPYSDQRL 9
+I YS+Q+L
Sbjct: 458 VITYSEQKL 466
18|Sequence|86|95|DQRLRPRRTK
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 1 DQRLRPRRT 9
+QR +P+RT
Sbjct: 64 NQRTKPKRT 72
>sp|PG170_MONPV|PROTEIN OPG170|Monkeypox virus (MPXV)
Query: 1 DQRLRPRRTK 10
D RL+PR K
Sbjct: 147 DNRLKPRDFK 156
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 1 DQRLRP 6
DQRL P
Sbjct: 56 DQRLHP 61
>sp|VC17_VACCC|ANKYRIN repeat protein C17/B23|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DQRLRPRR 8
D+R+RP +
Sbjct: 153 DKRIRPSK 160
>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /
Query: 1 DQRLRPRR 8
D+R+RP +
Sbjct: 139 DKRIRPSK 146
19|Sequence|91|100|PRRTKLYVMA
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 2 RRTKLYVMA 10
RRTKLY A
Sbjct: 1329 RRTKLYEAA 1337
Query: 1 PRRTKLYV 8
PR T++YV
Sbjct: 282 PRSTEVYV 289
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 RRTKLYVMA 10
RRTKLY A
Sbjct: 1330 RRTKLYEAA 1338
Query: 1 PRRTKLYV 8
PR T++YV
Sbjct: 282 PRSTEVYV 289
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 RRTKLYVMA 10
RRTKLY A
Sbjct: 1330 RRTKLYEAA 1338
Query: 1 PRRTKLYV 8
PR T++YV
Sbjct: 282 PRSTEVYV 289
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 RRTKLY 7
RRTKLY
Sbjct: 1315 RRTKLY 1320
Query: 1 PRRTKLYV 8
PR T++YV
Sbjct: 282 PRSTEVYV 289
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 RRTKLY 7
RRTKLY
Sbjct: 1315 RRTKLY 1320
Query: 1 PRRTKLYV 8
PR T++YV
Sbjct: 282 PRSTEVYV 289
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 RRTKLY 7
RRTKLY
Sbjct: 1315 RRTKLY 1320
Query: 1 PRRTKLYV 8
PR T++YV
Sbjct: 282 PRSTEVYV 289
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 RRTKLY 7
RRTKLY
Sbjct: 1315 RRTKLY 1320
Query: 1 PRRTKLYV 8
PR T++YV
Sbjct: 282 PRSTEVYV 289
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 3 RTKLYVMA 10
+TKLYV A
Sbjct: 207 QTKLYVQA 214
>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971
Query: 3 RTKLYVMA 10
+TKLYV A
Sbjct: 206 QTKLYVQA 213
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 PRRTKLYVM 9
P R K+Y M
Sbjct: 2013 PEREKVYTM 2021
>sp|B6_HHV6Z|PROTEIN B6|Human herpesvirus 6B (strain Z29)
Query: 1 PRRTKLY 7
PR T++Y
Sbjct: 15 PRSTRMY 21
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 PRRTKLYVM 9
P R K+Y M
Sbjct: 2017 PEREKVYTM 2025
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 PRRTKLYVM 9
P R K+Y M
Sbjct: 2017 PEREKVYTM 2025
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 PRRTKL 6
PR+TKL
Sbjct: 1849 PRKTKL 1854
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 PRRTKLYV 8
PR T++YV
Sbjct: 282 PRSTEVYV 289
Query: 2 RRTKLY 7
RRT+LY
Sbjct: 1313 RRTRLY 1318
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PRRTKLYV 8
PR T++YV
Sbjct: 282 PRSTEVYV 289
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 PRRTKLYVM 9
P R K Y M
Sbjct: 2015 PERDKTYTM 2023
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 PRRTKLYV 8
PR+TK+ V
Sbjct: 3168 PRKTKIAV 3175
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 PRRTKLYV 8
PR+TK+ V
Sbjct: 3168 PRKTKIAV 3175
20|Sequence|96|105|LYVMASVFVC
>sp|UL92_EBVB9|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain B95-8)
Query: 4 MASVFVC 10
MASVF C
Sbjct: 40 MASVFAC 46
>sp|UL92_EBVA8|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain AG876)
Query: 4 MASVFVC 10
MASVF C
Sbjct: 40 MASVFAC 46
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 LYVMASVFVC 10
L+VM ++ VC
Sbjct: 299 LWVMNTLMVC 308
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 LYVMASVFVC 10
L+VM ++ VC
Sbjct: 298 LWVMNTLMVC 307
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 LYVMASVFVC 10
L+VM ++ VC
Sbjct: 298 LWVMNTLMVC 307
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 1 LYVMASVFVC 10
L+VM ++ VC
Sbjct: 298 LWVMNTLMVC 307
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 LYVMASVFVC 10
L+VM ++ VC
Sbjct: 299 LWVMNTLMVC 308
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 LYVMASVFVC 10
L+VM ++ VC
Sbjct: 298 LWVMNTLMVC 307
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 LYVMASVFVC 10
L+VM ++ VC
Sbjct: 298 LWVMNTLMVC 307
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 LYVMASVFVC 10
L+VM ++ VC
Sbjct: 298 LWVMNTLMVC 307
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 3 VMASVFVC 10
V+ASV VC
Sbjct: 8 VLASVAVC 15
>sp|BDLF3_EBVB9|GLYCOPROTEIN BDLF3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 VMASVFVC 10
VMA + +C
Sbjct: 11 VMAMILIC 18
21|Sequence|101|110|SVFVCLLLSG
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 2 VFVCLLLSG 10
+F+C+L G
Sbjct: 4 IFICILHCG 12
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 2 VFVCLLL 8
+F CLLL
Sbjct: 795 IFKCLLL 801
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 SVFVCL 6
+VF+CL
Sbjct: 821 TVFICL 826
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 2 VFVCL 6
VFVCL
Sbjct: 200 VFVCL 204
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 SVFVCLLLS 9
++F+CL ++
Sbjct: 3377 NIFICLFVA 3385
22|Sequence|106|115|LLLSGLAVFF
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 LLLSGLAVFF 10
LL SG+ +FF
Sbjct: 2169 LLTSGMVIFF 2178
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 LLLSGLAVFF 10
LL SG+ +FF
Sbjct: 2169 LLTSGMVIFF 2178
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 LLLSGLAVFF 10
LL SG+ +FF
Sbjct: 2169 LLTSGMVIFF 2178
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 LLLSGLAVFF 10
LL SG+ +FF
Sbjct: 2169 LLTSGMVIFF 2178
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 LLLSGLAVFF 10
LL SG+ +FF
Sbjct: 2169 LLTSGMVIFF 2178
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 LLLSGLAVFF 10
LL SG+ +FF
Sbjct: 2169 LLTSGMVIFF 2178
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 LLLSGLAVFF 10
LL SG+ +FF
Sbjct: 2169 LLTSGMVIFF 2178
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 LLLSGLAVFF 10
LL SG+ +FF
Sbjct: 2169 LLTSGMVIFF 2178
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 LLLSGLAVF 9
++L+GL+VF
Sbjct: 1338 IMLTGLSVF 1346
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LLSGLAVFF 10
L SG+ VFF
Sbjct: 2617 LQSGVDVFF 2625
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LLSGLAVFF 10
L SG+ VFF
Sbjct: 2614 LQSGVDVFF 2622
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LLSGLAVFF 10
L SG+ VFF
Sbjct: 2617 LQSGVDVFF 2625
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LLSGLAVFF 10
L SG+ VFF
Sbjct: 2617 LQSGVDVFF 2625
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 LLSGLAVFF 10
L SG+ VFF
Sbjct: 2617 LQSGVDVFF 2625
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LLSGLAVFF 10
L SG+ VFF
Sbjct: 2617 LQSGVDVFF 2625
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LLSGLAVFF 10
L SG+ VFF
Sbjct: 2617 LQSGVDVFF 2625
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LLLSGLAVF 9
LLLSG+A +
Sbjct: 329 LLLSGVATW 337
>sp|U24_HHV6U|U24 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LLLSGLAV 8
L+L+GLA+
Sbjct: 60 LVLTGLAI 67
>sp|U24_HHV6Z|U24 protein|Human herpesvirus 6B (strain Z29)
Query: 1 LLLSGLAV 8
L+L+GLA+
Sbjct: 61 LVLTGLAI 68
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 LLSGLAVFF 10
L GLAVF+
Sbjct: 5587 LAIGLAVFY 5595
23|Sequence|111|120|LAVFFLFPRS
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 AVFFLFPRS 10
A F+L PRS
Sbjct: 203 AEFYLLPRS 211
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 2 AVFFLFPRS 10
A F+L PRS
Sbjct: 202 AEFYLIPRS 210
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 LAVFFLF 7
LAV FLF
Sbjct: 372 LAVLFLF 378
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 LAVFFLF 7
LAV FLF
Sbjct: 372 LAVLFLF 378
>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 4 FFLFPRS 10
F++ PRS
Sbjct: 204 FYIIPRS 210
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 4 FFLFPRS 10
F++ PRS
Sbjct: 204 FYIIPRS 210
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 FFLFPRS 10
F++ PRS
Sbjct: 204 FYIIPRS 210
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 4 FFLFPRS 10
F++ PRS
Sbjct: 204 FYIIPRS 210
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 4 FFLFPRS 10
F++ PRS
Sbjct: 204 FYIIPRS 210
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 4 FFLFPRS 10
F++ PRS
Sbjct: 204 FYIIPRS 210
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 4 FFLFPRS 10
F++ PRS
Sbjct: 204 FYIIPRS 210
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 4 FFLFPRS 10
F++ PRS
Sbjct: 204 FYIIPRS 210
>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain
Query: 4 FFLFPRS 10
F++ PRS
Sbjct: 205 FYIIPRS 211
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 4 FFLFPRS 10
F++ PRS
Sbjct: 204 FYIIPRS 210
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 4 FFLFPRS 10
F++ PRS
Sbjct: 204 FYIIPRS 210
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 FFLFP 8
FF+FP
Sbjct: 297 FFIFP 301
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 FFLFP 8
FF+FP
Sbjct: 297 FFIFP 301
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 FFLFP 8
FF+FP
Sbjct: 297 FFIFP 301
>sp|NEC1_HHV6Z|NUCLEAR egress protein 1|Human herpesvirus 6B (strain Z29)
Query: 2 AVFFLFP 8
AVF LFP
Sbjct: 43 AVFNLFP 49
>sp|NEC1_HHV6H|NUCLEAR egress protein 1|Human herpesvirus 6B (HHV-6 variant
Query: 2 AVFFLFP 8
AVF LFP
Sbjct: 43 AVFNLFP 49
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 FFLFPRS 10
F++ PRS
Sbjct: 205 FYIIPRS 211
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 4 FFLFPRS 10
F++ PRS
Sbjct: 204 FYIIPRS 210
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 3 VFFLFP 8
VFF FP
Sbjct: 544 VFFKFP 549
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 FFLFPRS 10
F++ PRS
Sbjct: 205 FYIIPRS 211
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 AVFFLFPRS 10
A F+L P+S
Sbjct: 203 AEFYLIPQS 211
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 AVFFLFPRS 10
A F+L P+S
Sbjct: 203 AEFYLIPQS 211
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 AVFFLFPRS 10
A F+L P+S
Sbjct: 203 AEFYLIPQS 211
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 FFLFPRS 10
F++ PRS
Sbjct: 204 FYIIPRS 210
>sp|US21_HCMVM|MEMBRANE protein US21|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 AVFFLFPRS 10
AVF LFP +
Sbjct: 149 AVFSLFPEA 157
>sp|US21_HCMVA|UNCHARACTERIZED protein HWLF2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 AVFFLFPRS 10
AVF LFP +
Sbjct: 149 AVFSLFPEA 157
24|Sequence|116|125|LFPRSIDVKY
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 3 PRSIDVKY 10
P SIDVK+
Sbjct: 524 PVSIDVKH 531
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LFPRSIDV 8
L PRS+DV
Sbjct: 25 LDPRSLDV 32
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 2 FPRSIDVKY 10
FPRSI +
Sbjct: 323 FPRSIQTTH 331
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 LFPRSIDVKY 10
LFP+ + V Y
Sbjct: 1327 LFPQYLSVNY 1336
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 LFPRSIDVKY 10
LFP+ + V Y
Sbjct: 1327 LFPQYLSVNY 1336
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 LFPRSIDVKY 10
LFP+ + V Y
Sbjct: 1327 LFPQYLSVNY 1336
>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I01A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 3 PRSIDVKY 10
P S+DVK+
Sbjct: 530 PISLDVKH 537
>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Puerto
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Brevig
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 SIDVKY 10
SID+KY
Sbjct: 375 SIDLKY 380
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 PRSIDVKY 10
PR VKY
Sbjct: 1848 PRKCQVKY 1855
>sp|YVDE_VACCC|UNCHARACTERIZED 9.3 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PRSIDVKY 10
P S+++KY
Sbjct: 27 PNSLELKY 34
25|Sequence|121|130|IDVKYIGVKS
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 1 IDVKYIG 7
ID++Y+G
Sbjct: 334 IDIRYVG 340
>sp|US14_HCMVM|MEMBRANE protein US14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DVKYIGVK 9
DV+YI K
Sbjct: 227 DVRYIATK 234
>sp|US14_HCMVA|UNCHARACTERIZED protein HVLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DVKYIGVK 9
DV+YI K
Sbjct: 227 DVRYIATK 234
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 KYIGVK 9
KY+GVK
Sbjct: 1074 KYLGVK 1079
26|Sequence|126|135|IGVKSAYVSY
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 2 GVKSAYVSY 10
G+K+AY +Y
Sbjct: 198 GLKTAYFNY 206
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GVKSAYVSY 10
GV SA+VS+
Sbjct: 704 GVGSAFVSF 712
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 GVKSAYVSY 10
GVK ++SY
Sbjct: 2205 GVKPTHISY 2213
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 GVKSAYVSY 10
GVK ++SY
Sbjct: 2205 GVKPTHISY 2213
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 GVKSAYVSY 10
GVK ++SY
Sbjct: 2205 GVKPTHISY 2213
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 GVKSAYVSY 10
GVK ++SY
Sbjct: 2205 GVKPTHISY 2213
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 GVKSAYVSY 10
GVK ++SY
Sbjct: 2205 GVKPTHISY 2213
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 GVKSAYVSY 10
GVK ++SY
Sbjct: 2205 GVKPTHISY 2213
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 GVKSAYVSY 10
GVK ++SY
Sbjct: 2205 GVKPTHISY 2213
>sp|VE2_HPV63|REGULATORY protein E2|Human papillomavirus type 63
Query: 2 GVKSAYVSY 10
GVK+ YV +
Sbjct: 165 GVKNYYVDF 173
27|Sequence|131|140|AYVSYDVQKR
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 AYVSYDVQK 9
AYVS D Q+
Sbjct: 2058 AYVSADTQE 2066
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 AYVSYDVQK 9
AYVS D Q+
Sbjct: 2031 AYVSADTQE 2039
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 AYVSYDVQK 9
AYVS D Q+
Sbjct: 2036 AYVSADTQE 2044
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 YVSYDVQKR 10
YVS ++KR
Sbjct: 1839 YVSLGIKKR 1847
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 YVSYDVQKR 10
YVS ++KR
Sbjct: 1838 YVSLGIKKR 1846
>sp|NCAP_HRSVA|NUCLEOPROTEIN respiratory syncytial virus A
Query: 4 SYDVQK 9
+YDVQK
Sbjct: 37 NYDVQK 42
>sp|NCAP_HRSV|NUCLEOPROTEIN respiratory syncytial virus
Query: 4 SYDVQK 9
+YDVQK
Sbjct: 37 NYDVQK 42
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 2 YVSYDVQ 8
+V+YDV+
Sbjct: 279 FVTYDVE 285
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 2 YVSYDVQ 8
+V+YDV+
Sbjct: 279 FVTYDVE 285
>sp|NCAP_HRSVB|NUCLEOPROTEIN respiratory syncytial virus B
Query: 4 SYDVQK 9
+YDVQK
Sbjct: 37 NYDVQK 42
>sp|NCAP_HRSV1|NUCLEOPROTEIN respiratory syncytial virus B
Query: 4 SYDVQK 9
+YDVQK
Sbjct: 37 NYDVQK 42
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 YVSYDVQ 8
+V+YDV+
Sbjct: 270 FVTYDVE 276
28|Sequence|136|145|DVQKRTIYLN
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 DVQKRTIYLN 10
D ++RT+Y N
Sbjct: 198 DTEQRTLYQN 207
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 DVQKRTI 7
DVQ RT+
Sbjct: 1017 DVQSRTV 1023
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 DVQKRTIYLN 10
D+Q RT+ N
Sbjct: 1017 DIQSRTVESN 1026
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 DVQKRTI 7
D+Q RTI
Sbjct: 1014 DIQARTI 1020
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 2 VQKRTIYLN 10
+Q +TIYL+
Sbjct: 1128 LQGKTIYLH 1136
>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)
Query: 1 DVQKRTIYLN 10
D KR++Y++
Sbjct: 747 DKTKRSVYMD 756
>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957
Query: 1 DVQKRTIYLN 10
+ ++RT+Y N
Sbjct: 198 ETEQRTLYQN 207
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 1 DVQKRTI 7
D+Q RT+
Sbjct: 1018 DIQSRTV 1024
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 DVQKRTI 7
D+Q RT+
Sbjct: 1018 DIQSRTV 1024
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 DVQKRTI 7
D+Q RT+
Sbjct: 1017 DIQSRTV 1023
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 DVQKRTI 7
D+Q RT+
Sbjct: 1014 DIQSRTV 1020
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 DVQKRTI 7
D+Q RT+
Sbjct: 1015 DIQSRTV 1021
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 DVQKRTI 7
D+Q RT+
Sbjct: 1014 DIQSRTV 1020
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 DVQKRTI 7
D+Q RT+
Sbjct: 1015 DIQSRTV 1021
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 DVQKRTI 7
D+Q RT+
Sbjct: 1002 DIQSRTV 1008
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 1 DVQKRTIYLN 10
D Q RT+ N
Sbjct: 291 DAQNRTVQFN 300
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 1 DVQKRTIYLN 10
D Q RT+ N
Sbjct: 291 DAQNRTVQFN 300
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 1 DVQKRTIY 8
DV K TIY
Sbjct: 485 DVTKGTIY 492
29|Sequence|141|150|TIYLNITNTL
>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945
Query: 3 YLNITNT 9
Y+NI+NT
Sbjct: 66 YVNISNT 72
>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943
Query: 3 YLNITNT 9
Y+NI+NT
Sbjct: 66 YVNISNT 72
>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort
Query: 3 YLNITNT 9
Y+NI+NT
Sbjct: 66 YVNISNT 72
>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940
Query: 3 YLNITNT 9
Y+NI+NT
Sbjct: 66 YVNISNT 72
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 3 YLNITNT 9
+LNI+NT
Sbjct: 405 FLNISNT 411
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 3 YLNITNT 9
+LNI+NT
Sbjct: 403 FLNISNT 409
>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954
Query: 3 YLNITNT 9
Y+NI+NT
Sbjct: 66 YVNISNT 72
>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935
Query: 3 YLNITNT 9
Y+NI+NT
Sbjct: 66 YVNISNT 72
>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951
Query: 3 YLNITNT 9
Y+NI+NT
Sbjct: 66 YVNISNT 72
>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954
Query: 3 YLNITNT 9
Y+NI+NT
Sbjct: 66 YVNISNT 72
>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979
Query: 3 YLNITNT 9
Y+NI+NT
Sbjct: 66 YVNISNT 72
>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977
Query: 3 YLNITNT 9
Y+NI+NT
Sbjct: 66 YVNISNT 72
>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978
Query: 3 YLNITNT 9
Y+NI+NT
Sbjct: 66 YVNISNT 72
>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 3 YLNITNT 9
+LNITN+
Sbjct: 402 FLNITNS 408
>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 3 YLNITNT 9
+LNITN+
Sbjct: 402 FLNITNS 408
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 3 YLNITNT 9
+LNITN+
Sbjct: 402 FLNITNS 408
>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 3 YLNITNT 9
+LNITN+
Sbjct: 402 FLNITNS 408
>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 3 YLNITNT 9
+LNITN+
Sbjct: 402 FLNITNS 408
>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936
Query: 3 YLNITNT 9
Y+NI+NT
Sbjct: 66 YVNISNT 72
>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959
Query: 3 YLNITNT 9
Y+NI+NT
Sbjct: 66 YVNISNT 72
>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996
Query: 3 YLNITNT 9
Y+NI+NT
Sbjct: 66 YVNISNT 72
>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 YLNITNT 9
Y+NI+NT
Sbjct: 66 YVNISNT 72
>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong
Query: 3 YLNITNT 9
Y+NI+NT
Sbjct: 66 YVNISNT 72
>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New
Query: 3 YLNITNT 9
Y+NI+NT
Sbjct: 66 YVNISNT 72
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 TIYLNITNTL 10
+I NI+NTL
Sbjct: 796 SILSNISNTL 805
>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New
Query: 3 YLNITNT 9
Y+NI+NT
Sbjct: 66 YVNISNT 72
>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002
Query: 3 YLNITNT 9
Y+NI+NT
Sbjct: 51 YVNISNT 57
>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 YLNITNT 9
Y+NI+NT
Sbjct: 66 YVNISNT 72
>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong
Query: 3 YLNITNT 9
Y+NI+NT
Sbjct: 66 YVNISNT 72
>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 YLNITNT 9
Y+NI+NT
Sbjct: 66 YVNISNT 72
>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig
Query: 3 YLNITNT 9
Y+NI+NT
Sbjct: 66 YVNISNT 72
>sp|VL2_HPV60|MINOR capsid protein L2|Human papillomavirus type 60
Query: 1 TIYLNITNTL 10
T+Y +I NT+
Sbjct: 170 TVYTSIDNTV 179
>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980
Query: 3 YLNITNT 9
Y+NI NT
Sbjct: 66 YVNINNT 72
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 3 YLNITNT 9
+LNI+NT
Sbjct: 398 FLNISNT 404
>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996
Query: 3 YLNITNT 9
Y+NI NT
Sbjct: 66 YVNINNT 72
>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983
Query: 3 YLNITNT 9
Y+NI NT
Sbjct: 66 YVNINNT 72
>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007
Query: 3 YLNITNT 9
Y+NI NT
Sbjct: 66 YVNINNT 72
>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996
Query: 3 YLNITNT 9
Y+NI NT
Sbjct: 66 YVNINNT 72
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 1 TIYLNITNTL 10
T++ N+TNT+
Sbjct: 673 TVFNNLTNTM 682
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 1 TIYLNITNTL 10
T++ N+TNT+
Sbjct: 673 TVFNNLTNTM 682
>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 YLNITNT 9
Y+NI NT
Sbjct: 66 YVNINNT 72
>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New
Query: 3 YLNITNT 9
Y+NI NT
Sbjct: 66 YVNINNT 72
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 TIYLNITNTL 10
T Y + NTL
Sbjct: 893 TTYYEVKNTL 902
>sp|NRAM_I82A2|NEURAMINIDASE A virus (strain A/Camel/Mongolia/1982
Query: 3 YLNITNT 9
Y+NI+NT
Sbjct: 49 YVNISNT 55
30|Sequence|146|155|ITNTLNITNN
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 ITNTLNITN 9
I+N LNI N
Sbjct: 87 ISNMLNIIN 95
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 ITNTLNITN 9
I+N LNI N
Sbjct: 88 ISNMLNIMN 96
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 ITNTLNITN 9
I+N LNI N
Sbjct: 88 ISNMLNIMN 96
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 ITNTLNITN 9
I+N LNI N
Sbjct: 88 ISNMLNIMN 96
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 3 NTLNIT 8
NTLN+T
Sbjct: 1846 NTLNLT 1851
31|Sequence|151|160|NITNNNYYSV
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 ITNNNYYSV 10
++NN Y++V
Sbjct: 656 VSNNGYFTV 664
>sp|MATRX_MEASI|MATRIX protein|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 ITNNNYYSV 10
+++N YY+V
Sbjct: 165 LSDNGYYTV 173
>sp|MATRX_MEASH|MATRIX protein|Measles virus (strain Halle) (MeV)
Query: 2 ITNNNYYSV 10
+++N YY+V
Sbjct: 165 LSDNGYYTV 173
>sp|MATRX_MEASE|MATRIX protein|Measles virus (strain Edmonston) (MeV)
Query: 2 ITNNNYYSV 10
+++N YY+V
Sbjct: 165 LSDNGYYTV 173
>sp|MATRX_MEASC|MATRIX protein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 ITNNNYYSV 10
+++N YY+V
Sbjct: 165 LSDNGYYTV 173
>sp|MATRX_MEASA|MATRIX protein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 ITNNNYYSV 10
+++N YY+V
Sbjct: 165 LSDNGYYTV 173
>sp|MATRX_MEASU|MATRIX protein|Measles virus (strain Hu2) (MeV)
Query: 2 ITNNNYYSV 10
+++N YY+V
Sbjct: 165 LSDNGYYTV 173
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 ITNNNYYSV 10
++NN Y+++
Sbjct: 653 VSNNGYFTI 661
>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)
Query: 6 NYYSV 10
NYYSV
Sbjct: 289 NYYSV 293
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 NNYYS 9
NNYY+
Sbjct: 328 NNYYA 332
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 NNYYS 9
NNYY+
Sbjct: 334 NNYYA 338
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 NITNNNY 7
NI NNNY
Sbjct: 829 NILNNNY 835
>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)
Query: 6 NYYSV 10
NYYSV
Sbjct: 288 NYYSV 292
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 3 TNNNYYSV 10
TN++ YSV
Sbjct: 509 TNHDIYSV 516
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 3 TNNNYYSV 10
TN++ YSV
Sbjct: 509 TNHDIYSV 516
32|Sequence|156|165|NYYSVEVENI
>sp|PG039_VACCC|INTERFERON antagonist OPG040|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NYYSVEVENI 10
N YSV +EN+
Sbjct: 219 NIYSVNLENV 228
>sp|PG039_MONPV|INTERFERON antagonist OPG039|Monkeypox virus (MPXV)
Query: 1 NYYSVEVENI 10
N YSV +EN+
Sbjct: 218 NIYSVNLENV 227
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 2 YYSVE 6
YYSVE
Sbjct: 628 YYSVE 632
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 2 YYSVE 6
YYSVE
Sbjct: 623 YYSVE 627
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 2 YYSVE 6
YYSVE
Sbjct: 628 YYSVE 632
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 2 YYSVE 6
YYSVE
Sbjct: 628 YYSVE 632
>sp|VL2_HPV24|MINOR capsid protein L2|Human papillomavirus 24
Query: 1 NYYSVEVE 8
N YS E+E
Sbjct: 230 NRYSFEIE 237
>sp|MATRX_HENDH|MATRIX protein|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 YYSVE 6
YYSVE
Sbjct: 249 YYSVE 253
33|Sequence|161|170|EVENITAQVQ
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 VENITAQVQ 10
+ NIT+QVQ
Sbjct: 1499 IVNITSQVQ 1507
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 VENITAQVQ 10
+ NIT+QVQ
Sbjct: 1499 IVNITSQVQ 1507
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 VENITAQVQ 10
+ NIT+QVQ
Sbjct: 1496 IVNITSQVQ 1504
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 VENITAQVQ 10
+ NIT+QVQ
Sbjct: 1496 IVNITSQVQ 1504
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 VENITAQVQ 10
+ N+T+Q+Q
Sbjct: 1496 IVNVTSQIQ 1504
34|Sequence|166|175|TAQVQFSKTV
>sp|VE6_HPV17|PROTEIN E6|Human papillomavirus 17
Query: 1 TAQVQFSK 8
TAQ +FSK
Sbjct: 68 TAQYEFSK 75
>sp|NCAP_PTPV|NUCLEOPROTEIN toro phlebovirus
Query: 4 VQFSKTV 10
+QFSKT+
Sbjct: 173 IQFSKTI 179
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 1 TAQVQFSKTV 10
T V+F KTV
Sbjct: 546 TVAVRFEKTV 555
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 1 TAQVQFSKTV 10
T V+F KTV
Sbjct: 546 TVAVRFEKTV 555
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 1 TAQVQFSKTV 10
T V+F KTV
Sbjct: 546 TVAVRFEKTV 555
35|Sequence|171|180|FSKTVIGKAR
>sp|VE6_HPV11|PROTEIN E6|Human papillomavirus 11
Query: 3 KTVIGKAR 10
K ++GKAR
Sbjct: 118 KHILGKAR 125
>sp|TEG7_HHV6Z|TEGUMENT protein UL51 homolog|Human herpesvirus 6B (strain Z29)
Query: 1 FSKTVIGK 8
F KT+IG+
Sbjct: 122 FMKTLIGE 129
>sp|TEG7_HHV6U|TEGUMENT protein UL51 homolog|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 FSKTVIGK 8
F KT+IG+
Sbjct: 114 FMKTLIGE 121
36|Sequence|176|185|IGKARLNNIT
>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30
Query: 3 KARLNNIT 10
KAR NNIT
Sbjct: 45 KARQNNIT 52
>sp|VE2_HPV53|REGULATORY protein E2|Human papillomavirus type 53
Query: 3 KARLNNIT 10
KAR NN+T
Sbjct: 45 KARENNMT 52
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 1 IGKARLNNIT 10
IGK LN++T
Sbjct: 648 IGKDGLNDVT 657
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 1 IGKARLNNIT 10
IGK LN++T
Sbjct: 648 IGKDGLNDVT 657
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 KARLNNIT 10
KARLN+ T
Sbjct: 2524 KARLNSCT 2531
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 IGKARL 6
+GKARL
Sbjct: 1381 VGKARL 1386
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 IGKARL 6
+GKARL
Sbjct: 1381 VGKARL 1386
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 IGKARL 6
+GKARL
Sbjct: 1381 VGKARL 1386
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 IGKARL 6
+GKARL
Sbjct: 1381 VGKARL 1386
37|Sequence|181|190|LNNITIIGPL
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 NNITIIGPL 10
N +TI+GPL
Sbjct: 1807 NAVTILGPL 1815
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 NNITIIGPL 10
N +TI+GP+
Sbjct: 1807 NAVTILGPM 1815
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 NNITIIGPL 10
N +TI+GP+
Sbjct: 1807 NAVTILGPM 1815
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 NNITIIGPL 10
N +TI+GP+
Sbjct: 1807 NAVTILGPM 1815
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 NNITIIGPL 10
N +TI+GP+
Sbjct: 1807 NAVTILGPM 1815
>sp|NSP3_ROTH7|NON-STRUCTURAL protein 3|Rotavirus A (isolate RVA/Human/United
Query: 1 LNNITIIGPL 10
LN+I +I P+
Sbjct: 263 LNSIDVINPI 272
>sp|NSP3_ROT41|NON-STRUCTURAL protein 3|Rotavirus A (isolate
Query: 1 LNNITIIGPL 10
LN+I +I P+
Sbjct: 266 LNSIDVINPI 275
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 LNNITIIGPL 10
LNN+++ PL
Sbjct: 333 LNNVSVPSPL 342
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 LNNITIIGPL 10
LNN+++ PL
Sbjct: 333 LNNVSVPSPL 342
>sp|NSP3_ROTHT|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 1 LNNITIIGPL 10
LN+I +I P+
Sbjct: 266 LNSIDLINPI 275
>sp|NSP3_ROTHP|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 1 LNNITIIGPL 10
LN+I +I P+
Sbjct: 263 LNSIDLINPI 272
>sp|NSP3_ROTHK|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 1 LNNITIIGPL 10
LN+I +I P+
Sbjct: 266 LNSIDLINPI 275
>sp|NSP3_ROTAM|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 1 LNNITIIGPL 10
LN+I +I P+
Sbjct: 263 LNSIDLINPI 272
>sp|NSP3_ROTAD|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 1 LNNITIIGPL 10
LN+I +I P+
Sbjct: 263 LNSIDLINPI 272
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NNITIIGPL 10
N+I + GPL
Sbjct: 1369 NDIPMTGPL 1377
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NNITIIGPL 10
N+I + GPL
Sbjct: 1369 NDIPMTGPL 1377
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NNITIIGPL 10
N+I + GPL
Sbjct: 1369 NDIPMTGPL 1377
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 NNITIIGPL 10
N+I + GPL
Sbjct: 1369 NDIPMTGPL 1377
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NNITIIGPL 10
N+I + GPL
Sbjct: 1369 NDIPMTGPL 1377
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NNITIIGPL 10
N+I + GPL
Sbjct: 1369 NDIPMTGPL 1377
>sp|NSP3_ROTHS|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4])
Query: 1 LNNITIIGPL 10
LN+I +I P+
Sbjct: 266 LNSIDLINPV 275
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 1 LNNITIIGPL 10
+N+I I GP
Sbjct: 548 INDIVISGPF 557
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 NITIIGP 9
N+T +GP
Sbjct: 849 NLTTVGP 855
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 1 LNNITIIGP 9
LN+ +++GP
Sbjct: 646 LNSESVLGP 654
>sp|DR6_HHV6Z|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6B (strain Z29)
Query: 4 ITIIGPL 10
+T+ GPL
Sbjct: 319 VTVAGPL 325
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 LNNITI 6
LNN+TI
Sbjct: 2010 LNNLTI 2015
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 LNNITI 6
LNN+TI
Sbjct: 2010 LNNLTI 2015
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 LNNITI 6
LNN+TI
Sbjct: 2010 LNNLTI 2015
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 LNNITI 6
LNN+TI
Sbjct: 2010 LNNLTI 2015
>sp|GG_HHV11|ENVELOPE glycoprotein G|Human herpesvirus 1 (strain 17)
Query: 5 TIIGPL 10
TIIGPL
Sbjct: 149 TIIGPL 154
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 LNNITI 6
LNN+TI
Sbjct: 2010 LNNLTI 2015
38|Sequence|186|195|IIGPLDMKQI
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 GPLDMK 8
GP+DMK
Sbjct: 1410 GPIDMK 1415
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 GPLDMKQI 10
GPLD++++
Sbjct: 2759 GPLDLEKV 2766
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 IGPLDM 7
+GPLD+
Sbjct: 648 VGPLDL 653
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 IGPLDM 7
+GPLD+
Sbjct: 648 VGPLDL 653
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 IGPLDM 7
+GPLD+
Sbjct: 648 VGPLDL 653
>sp|KITH_VARV|THYMIDINE kinase|Variola virus
Query: 1 IIGPLDMKQ 9
IIG +DM Q
Sbjct: 159 IIGGIDMYQ 167
>sp|KITH_VAR67|THYMIDINE kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 IIGPLDMKQ 9
IIG +DM Q
Sbjct: 159 IIGGIDMYQ 167
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 2 IGPLDM 7
+GPLD+
Sbjct: 603 VGPLDI 608
>sp|VL2_HPV09|MINOR capsid protein L2|Human papillomavirus 9
Query: 1 IIGPLDM 7
IIGP D+
Sbjct: 95 IIGPTDL 101
>sp|VL2_HPV24|MINOR capsid protein L2|Human papillomavirus 24
Query: 1 IIGPLDM 7
+IGP D+
Sbjct: 95 VIGPADL 101
39|Sequence|191|200|DMKQIDYTVP
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 IDYTVP 10
IDYTVP
Sbjct: 482 IDYTVP 487
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 5 IDYTVP 10
IDYTVP
Sbjct: 482 IDYTVP 487
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 5 IDYTVP 10
IDYTVP
Sbjct: 482 IDYTVP 487
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 DMKQIDY 7
D KQ+DY
Sbjct: 6353 DAKQVDY 6359
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 1 DMKQIDYTVP 10
D +D+T+P
Sbjct: 374 DTPAVDHTLP 383
>sp|DUT_CWPXG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Cowpox virus (strain GRI-90 /
Query: 6 DYTVP 10
DYT+P
Sbjct: 39 DYTIP 43
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 4 QIDYTV 9
Q+DYT+
Sbjct: 1984 QLDYTI 1989
>sp|DUT_VACCP|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain L-IVP)
Query: 6 DYTVP 10
DYT+P
Sbjct: 39 DYTIP 43
>sp|DUT_VACCC|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain
Query: 6 DYTVP 10
DYT+P
Sbjct: 39 DYTIP 43
>sp|DUT_VACCA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain
Query: 6 DYTVP 10
DYT+P
Sbjct: 39 DYTIP 43
>sp|DUT_MONPV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Monkeypox virus (MPXV)
Query: 6 DYTVP 10
DYT+P
Sbjct: 43 DYTIP 47
40|Sequence|196|205|DYTVPTVIAE
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 2 YTVPTVI 8
Y VPTV+
Sbjct: 564 YAVPTVV 570
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 2 YTVPTVI 8
Y VPTV+
Sbjct: 564 YAVPTVV 570
>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain
Query: 1 DYTVPTV 7
DYT PT+
Sbjct: 43 DYTGPTM 49
>sp|CVC2_HHV7J|CAPSID vertex component 2|Human herpesvirus 7 (strain JI)
Query: 1 DYTVPTVIA 9
+Y VPT +A
Sbjct: 423 NYVVPTYLA 431
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 1 DYTVPTVI 8
+YT+P V+
Sbjct: 587 EYTLPNVL 594
>sp|ETF1_VARV|EARLY transcription factor 70 kDa|Variola virus
Query: 1 DYTVPTVIAE 10
DY V T+I E
Sbjct: 28 DYLVRTIIDE 37
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 4 VPTVIAE 10
VPT+++E
Sbjct: 1877 VPTIVSE 1883
Query: 2 YTVPTVIA 9
+ +PTVIA
Sbjct: 3309 FLLPTVIA 3316
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 VPTVIAE 10
VPT+++E
Sbjct: 1877 VPTIVSE 1883
Query: 2 YTVPTVIA 9
+ +PTVIA
Sbjct: 3309 FLLPTVIA 3316
>sp|ETF1_VAR67|EARLY transcription factor 70 kDa|Variola virus (isolate
Query: 1 DYTVPTVIAE 10
DY V T+I E
Sbjct: 28 DYLVRTIIDE 37
>sp|ETF1_VACCT|EARLY transcription factor 70 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 DYTVPTVIAE 10
DY V T+I E
Sbjct: 28 DYLVRTIIDE 37
>sp|ETF1_MONPV|EARLY transcription factor 70 kDa|Monkeypox virus (MPXV)
Query: 1 DYTVPTVIAE 10
DY V T+I E
Sbjct: 28 DYLVRTIIDE 37
>sp|ETF1_VACCA|EARLY transcription factor 70 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 DYTVPTVIAE 10
DY V T+I E
Sbjct: 28 DYLVRTIIDE 37
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 TVPTVIAE 10
T+PT +AE
Sbjct: 2339 TLPTALAE 2346
>sp|ETF1_VACCC|EARLY transcription factor 70 kDa|Vaccinia virus (strain Copenhagen)
Query: 1 DYTVPTVIAE 10
DY V T+I E
Sbjct: 28 DYLVRTIIDE 37
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 DYTVPTVIAE 10
DY V V+AE
Sbjct: 3350 DYHVTKVLAE 3359
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 DYTVPTVIAE 10
DY V V+AE
Sbjct: 3350 DYHVTKVLAE 3359
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 YTVPTVIAE 10
Y VPT+ E
Sbjct: 460 YNVPTIWLE 468
>sp|YHL4_HCMVA|UNCHARACTERIZED protein HHLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DYTVPTVIA 9
DY PT+ A
Sbjct: 135 DYATPTLFA 143
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 DYTVPTV 7
DY PTV
Sbjct: 2302 DYQAPTV 2308
>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 DYTVPTVIA 9
D+TVP A
Sbjct: 58 DFTVPAAAA 66
>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 DYTVPTVIA 9
D+TVP A
Sbjct: 58 DFTVPAAAA 66
>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 DYTVPTVIA 9
D+TVP A
Sbjct: 58 DFTVPAAAA 66
41|Sequence|201|210|TVIAEEMSYM
***** No hits found ******
42|Sequence|206|215|EMSYMYDFCT
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 4 YMYDFC 9
Y+YD C
Sbjct: 682 YVYDIC 687
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 4 YMYDFC 9
Y+YD C
Sbjct: 677 YVYDIC 682
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 4 YMYDFC 9
Y+YD C
Sbjct: 682 YVYDIC 687
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 4 YMYDFC 9
Y+YD C
Sbjct: 673 YVYDIC 678
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 4 YMYDFC 9
Y+YD C
Sbjct: 607 YVYDIC 612
>sp|AN_HHV6Z|ALKALINE nuclease|Human herpesvirus 6B (strain Z29)
Query: 1 EMSYMYDFC 9
E+ +YD+C
Sbjct: 92 ELCKLYDYC 100
>sp|YVFF_VACCC|UNCHARACTERIZED 8.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 EMSYMYDFC 9
E+ Y++ FC
Sbjct: 49 EIQYLHSFC 57
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 EMSYMYDFC 9
E Y+YD C
Sbjct: 543 EPIYVYDIC 551
>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus
Query: 2 MSYMYDF 8
M YM DF
Sbjct: 275 MPYMIDF 281
>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 EMSYMYDFC 9
E+ +YD+C
Sbjct: 92 ELCKLYDYC 100
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 1 EMSYMYDFC 9
+ S YDFC
Sbjct: 90 KTSIFYDFC 98
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 1 EMSYMYDFC 9
+ S YDFC
Sbjct: 90 KTSVFYDFC 98
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 5 MYDFC 9
+YDFC
Sbjct: 3497 VYDFC 3501
>sp|U21_HHV6U|GLYCOPROTEIN U21|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 MSYMYDFC 9
+ YM+ FC
Sbjct: 402 VDYMWPFC 409
43|Sequence|211|220|YDFCTLISIK
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 2 DFCTLIS 8
DFCTLI
Sbjct: 1696 DFCTLIQ 1702
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DFCTLIS 8
DFC L+S
Sbjct: 1294 DFCQLVS 1300
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DFCTLIS 8
DFC L+S
Sbjct: 1294 DFCQLVS 1300
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DFCTLIS 8
DFC L+S
Sbjct: 1294 DFCQLVS 1300
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DFCTLIS 8
DFC L+S
Sbjct: 1294 DFCQLVS 1300
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DFCTLIS 8
DFC L+S
Sbjct: 1294 DFCQLVS 1300
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DFCTLIS 8
DFC L+S
Sbjct: 1294 DFCQLVS 1300
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DFCTLIS 8
DFC L+S
Sbjct: 1294 DFCQLVS 1300
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DFCTLIS 8
DFC L+S
Sbjct: 1294 DFCQLVS 1300
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DFCTLIS 8
DFC L+S
Sbjct: 1294 DFCQLVS 1300
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 FCTLISIK 10
FC+ +SIK
Sbjct: 1278 FCSSLSIK 1285
>sp|E3145_ADE06|EARLY E3B 14 kDa protein|Human adenovirus C serotype 6
Query: 2 DFCTLI 7
D CTLI
Sbjct: 110 DLCTLI 115
>sp|E3145_ADE02|EARLY 3 14.7 kDa protein|Human adenovirus C serotype 2
Query: 2 DFCTLI 7
D CTLI
Sbjct: 110 DLCTLI 115
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 FCTLISI 9
FC LIS+
Sbjct: 10 FCLLISL 16
>sp|E3145_ADE05|EARLY E3 14.5 kDa protein|Human adenovirus C serotype 5
Query: 2 DFCTLI 7
D CTLI
Sbjct: 110 DLCTLI 115
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 1 YDFCTLI 7
Y FC LI
Sbjct: 217 YAFCPLI 223
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 YDFCTL 6
+DFC L
Sbjct: 1937 FDFCLL 1942
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 YDFCTL 6
+DFC L
Sbjct: 1937 FDFCLL 1942
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 YDFCTL 6
+DFC L
Sbjct: 1939 FDFCLL 1944
>sp|AN_HHV6Z|ALKALINE nuclease|Human herpesvirus 6B (strain Z29)
Query: 1 YDFCTLI 7
YD+C L+
Sbjct: 97 YDYCPLL 103
>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 YDFCTLI 7
YD+C L+
Sbjct: 97 YDYCPLL 103
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 FCTLISIK 10
FC +SIK
Sbjct: 339 FCGRVSIK 346
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 FCTLISIK 10
FC +SIK
Sbjct: 339 FCGRVSIK 346
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 FCTLISIK 10
FC +SIK
Sbjct: 339 FCGRVSIK 346
44|Sequence|216|225|LISIKVHNIV
***** No hits found ******
45|Sequence|221|230|VHNIVLMMQV
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 VHNIVLMMQ 9
VHN++ M+Q
Sbjct: 1672 VHNLIGMLQ 1680
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 VHNIVLMMQ 9
VHN++ M+Q
Sbjct: 1657 VHNLIGMLQ 1665
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 VHNIVLMMQ 9
VHN++ M+Q
Sbjct: 1657 VHNLIGMLQ 1665
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 VHNIVLMMQ 9
VHN++ M+Q
Sbjct: 1672 VHNLIGMLQ 1680
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 VHNIVLMMQ 9
VHN++ M+Q
Sbjct: 1655 VHNLIGMLQ 1663
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 VHNIVLMMQ 9
VHN++ M+Q
Sbjct: 1657 VHNLIGMLQ 1665
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 VHNIVLMMQ 9
VHN++ M+Q
Sbjct: 1671 VHNLIGMLQ 1679
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 VHNIVLMMQ 9
VHN++ M+Q
Sbjct: 1657 VHNLIGMLQ 1665
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 VHNIVLMMQ 9
VHN++ M+Q
Sbjct: 1657 VHNLIGMLQ 1665
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VHNIVLMMQ 9
V+N +MMQ
Sbjct: 368 VNNTTIMMQ 376
>sp|GAG_HV1ET|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 VHNIVLMMQ 9
V+N +MMQ
Sbjct: 368 VNNTTIMMQ 376
46|Sequence|226|235|LMMQVTVTTT
***** No hits found ******
47|Sequence|231|240|TVTTTYFGHS
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 3 TTTYFGH 9
T TYF H
Sbjct: 1018 TRTYFNH 1024
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 3 TTTYFGH 9
T TYF H
Sbjct: 1021 TRTYFDH 1027
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 TVTTTYFGHS 10
TV TY GH+
Sbjct: 1099 TVCITYPGHT 1108
>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 YFGH 9
YFGH
Sbjct: 165 YFGH 168
>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 YFGH 9
YFGH
Sbjct: 165 YFGH 168
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 1 TVTTTYF 7
TVT TYF
Sbjct: 466 TVTETYF 472
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 TVTTTYFG 8
T T+T+FG
Sbjct: 255 TQTSTWFG 262
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 TVTTTYFG 8
T T+T+FG
Sbjct: 257 TQTSTWFG 264
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 TTTYFGHS 10
T TY+ HS
Sbjct: 586 TLTYYAHS 593
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 TVTTTYFG 8
T T+T+FG
Sbjct: 263 TQTSTWFG 270
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 3 TTTYFGHS 10
T TY+ HS
Sbjct: 586 TLTYYAHS 593
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 TVTTTYFG 8
T T+T+FG
Sbjct: 263 TQTSTWFG 270
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 TVTTTYFG 8
T T+T+FG
Sbjct: 253 TQTSTWFG 260
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 TVTTTYFG 8
T T+T+FG
Sbjct: 261 TQTSTWFG 268
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 1 TVTTTYFG 8
TVT TY G
Sbjct: 635 TVTPTYIG 642
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 TVTTTYFG 8
T T+T+FG
Sbjct: 262 TQTSTWFG 269
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 TVTTTYFG 8
T T+T+FG
Sbjct: 252 TQTSTWFG 259
48|Sequence|236|245|YFGHSEQISQ
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
GHS Q+SQ
Sbjct: 123 GHSSQVSQ 130
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
GHS Q+SQ
Sbjct: 123 GHSSQVSQ 130
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
GHS Q+SQ
Sbjct: 123 GHSSQVSQ 130
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
GHS Q+SQ
Sbjct: 123 GHSNQVSQ 130
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
GHS Q+SQ
Sbjct: 123 GHSSQVSQ 130
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
GHS Q+SQ
Sbjct: 123 GHSSQVSQ 130
>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
GHS Q+SQ
Sbjct: 123 GHSSQVSQ 130
>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
GHS Q+SQ
Sbjct: 123 GHSSQVSQ 130
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
GHS Q+SQ
Sbjct: 123 GHSNQVSQ 130
>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
GHS Q+SQ
Sbjct: 123 GHSSQVSQ 130
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 2 FGHSEQI 8
FG SEQI
Sbjct: 107 FGESEQI 113
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 2 FGHSEQI 8
FG SEQI
Sbjct: 105 FGESEQI 111
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 2 FGHSEQI 8
FG SEQI
Sbjct: 105 FGESEQI 111
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 2 FGHSEQI 8
FG SEQI
Sbjct: 107 FGESEQI 113
>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United
Query: 2 FGHSEQ 7
FGHS Q
Sbjct: 335 FGHSSQ 340
>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 FGHSEQI 8
FG SEQ+
Sbjct: 106 FGESEQV 112
>sp|NSP1_ROTHC|NON-STRUCTURAL protein 1|Rotavirus C (isolate RVC/Human/United
Query: 1 YFGHSE 6
Y+GHS+
Sbjct: 268 YYGHSK 273
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 1 YFGHSEQI 8
+FG EQI
Sbjct: 250 FFGKREQI 257
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
G+S Q+SQ
Sbjct: 123 GNSSQVSQ 130
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
G+S Q+SQ
Sbjct: 126 GNSSQVSQ 133
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
G+S Q+SQ
Sbjct: 123 GNSSQVSQ 130
>sp|BMRF2_EBVG|PROTEIN BMRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 YFGHSEQIS 9
Y GHS I+
Sbjct: 263 YLGHSSIIA 271
>sp|BMRF2_EBVB9|PROTEIN BMRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 YFGHSEQIS 9
Y GHS I+
Sbjct: 263 YLGHSSIIA 271
>sp|BMRF2_EBVA8|PROTEIN BMRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 YFGHSEQIS 9
Y GHS I+
Sbjct: 263 YLGHSSIIA 271
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
G+S Q+SQ
Sbjct: 125 GNSSQVSQ 132
>sp|GAG_HV1W2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
G+S Q+SQ
Sbjct: 123 GNSSQVSQ 130
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
G+S Q+SQ
Sbjct: 123 GNSNQVSQ 130
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
G+S Q+SQ
Sbjct: 123 GNSSQVSQ 130
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
G+S Q+SQ
Sbjct: 123 GNSSQVSQ 130
>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
G+S Q+SQ
Sbjct: 123 GNSSQVSQ 130
>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
G+S Q+SQ
Sbjct: 123 GNSSQVSQ 130
>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
G+S Q+SQ
Sbjct: 123 GNSNQVSQ 130
>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
G+S Q+SQ
Sbjct: 125 GNSSQVSQ 132
>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
G+S Q+SQ
Sbjct: 123 GNSSQVSQ 130
>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
G+S Q+SQ
Sbjct: 126 GNSSQVSQ 133
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
G+S Q+SQ
Sbjct: 123 GNSSQVSQ 130
>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
G+S Q+SQ
Sbjct: 123 GNSSQVSQ 130
>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GHSEQISQ 10
G+S Q+SQ
Sbjct: 123 GNSSQVSQ 130
49|Sequence|241|250|EQISQERYQY
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 ISQERYQY 10
ISQ Y+Y
Sbjct: 501 ISQTHYRY 508
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 ISQERYQY 10
ISQ Y+Y
Sbjct: 504 ISQTHYRY 511
50|Sequence|246|255|ERYQYVDCGR
>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka
Query: 3 YQYVDC 8
YQY+DC
Sbjct: 41 YQYLDC 46
>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)
Query: 3 YQYVDC 8
YQY+DC
Sbjct: 41 YQYLDC 46
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 RYQYVDC 8
+Y YVDC
Sbjct: 359 QYGYVDC 365
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 RYQYVDC 8
+Y YVDC
Sbjct: 359 QYGYVDC 365
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 RYQYVDC 8
+Y YVDC
Sbjct: 359 QYGYVDC 365
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 RYQYVDC 8
RYQ V+C
Sbjct: 518 RYQVVEC 524
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 YQYVDC 8
Y YVDC
Sbjct: 1873 YLYVDC 1878
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 YQYVDC 8
Y YVDC
Sbjct: 1873 YLYVDC 1878
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 YQYVDC 8
Y YVDC
Sbjct: 1873 YLYVDC 1878
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 YQYVDC 8
Y YVDC
Sbjct: 1873 YLYVDC 1878
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 RYQYVDC 8
+Y YVDC
Sbjct: 359 QYGYVDC 365
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 RYQYVDC 8
+Y YVDC
Sbjct: 359 QYGYVDC 365
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 RYQYVDC 8
+Y YVDC
Sbjct: 359 QYGYVDC 365
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 YQYVDC 8
Y YVDC
Sbjct: 1873 YLYVDC 1878
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 ERYQYVDCGR 10
E+Y V CG+
Sbjct: 1679 EKYYNVTCGK 1688
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 ERYQYVDCGR 10
E+Y V CG+
Sbjct: 1679 EKYYNVTCGK 1688
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 2 RYQYVD 7
RYQ+VD
Sbjct: 430 RYQHVD 435
>sp|PG039_MONPV|INTERFERON antagonist OPG039|Monkeypox virus (MPXV)
Query: 2 RYQYVDCGR 10
R YV+C R
Sbjct: 273 RLMYVNCVR 281
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 2 RYQYVD 7
RYQ++D
Sbjct: 446 RYQHID 451
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 RYQYVDC 8
RYQ V C
Sbjct: 528 RYQVVRC 534
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 2 RYQYVDC 8
RYQ V C
Sbjct: 526 RYQVVRC 532
>sp|TEG6_VZVO|TEGUMENT protein UL55 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 ERYQYVDCG 9
E Y +V CG
Sbjct: 161 EAYDHVVCG 169
>sp|TEG6_VZVD|TEGUMENT protein UL55 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 ERYQYVDCG 9
E Y +V CG
Sbjct: 161 EAYDHVVCG 169
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 2 RYQYVD 7
RYQ++D
Sbjct: 447 RYQHID 452
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 4 QYVDC 8
QY DC
Sbjct: 2046 QYADC 2050
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 4 QYVDC 8
QY DC
Sbjct: 2046 QYADC 2050
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 4 QYVDC 8
+YVDC
Sbjct: 3401 KYVDC 3405
>sp|NS7A_SARS2|ORF7A protein|Severe acute respiratory syndrome coronavirus
Query: 1 ERYQYVDCGR 10
E Y Y +C R
Sbjct: 16 ELYHYQECVR 25
>sp|NS7A_SARS|ORF7A protein|Severe acute respiratory syndrome coronavirus
Query: 1 ERYQYVDCGR 10
E Y Y +C R
Sbjct: 16 ELYHYQECVR 25
51|Sequence|251|260|VDCGRNTTYQ
>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain
Query: 1 VDCGRNTTY 9
V+CG+N T+
Sbjct: 195 VECGKNLTW 203
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 1 VDCGRNTTY 9
V+CG+N T+
Sbjct: 195 VECGKNLTW 203
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 VDCGRNTT 8
VDC NTT
Sbjct: 187 VDCWCNTT 194
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 VDCGRNTT 8
VDC NTT
Sbjct: 187 VDCWCNTT 194
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 VDCGRNTT 8
VDC NTT
Sbjct: 187 VDCWCNTT 194
>sp|UL20_HCMVM|MEMBRANE protein UL20|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VDCGRNTTY 9
+DC +N TY
Sbjct: 103 LDCTKNDTY 111
>sp|US30_HCMVM|UNCHARACTERIZED protein US30|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VDCGRNTT 8
VD GRN +
Sbjct: 70 VDVGRNVS 77
>sp|US30_HCMVA|UNCHARACTERIZED protein HHRF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VDCGRNTT 8
VD GRN +
Sbjct: 70 VDVGRNVS 77
>sp|SCAF_HHV2H|CAPSID scaffolding protein|Human herpesvirus 2 (strain HG52)
Query: 2 DCGRN 6
DCGR+
Sbjct: 440 DCGRD 444
>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)
Query: 4 GRNTTY 9
GRNT Y
Sbjct: 487 GRNTRY 492
>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 GRNTTY 9
GRNT Y
Sbjct: 487 GRNTRY 492
>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)
Query: 4 GRNTTY 9
GRNT Y
Sbjct: 487 GRNTRY 492
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 1 VDCGRNT 7
VDC NT
Sbjct: 234 VDCAENT 240
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VDCGRNT 7
VDC NT
Sbjct: 234 VDCAENT 240
>sp|PG085_MONPV|METALLOENDOPEPTIDASE OPG085|Monkeypox virus (MPXV)
Query: 4 GRNTTY 9
GRNT Y
Sbjct: 487 GRNTRY 492
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 4 GRNTTY 9
RNTTY
Sbjct: 131 ARNTTY 136
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 2 DCGRN 6
DCGR+
Sbjct: 318 DCGRS 322
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DCGRNTT 8
D G+NTT
Sbjct: 1282 DIGQNTT 1288
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DCGRNTT 8
D G+NTT
Sbjct: 1282 DIGQNTT 1288
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DCGRNTT 8
D G+NTT
Sbjct: 1282 DIGQNTT 1288
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DCGRNTT 8
D G+NTT
Sbjct: 1282 DIGQNTT 1288
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DCGRNTT 8
D G+NTT
Sbjct: 1282 DIGQNTT 1288
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DCGRNTT 8
D G+NTT
Sbjct: 1282 DIGQNTT 1288
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DCGRNTT 8
D G+NTT
Sbjct: 1282 DIGQNTT 1288
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DCGRNTT 8
D G+NTT
Sbjct: 1282 DIGQNTT 1288
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 1 VDCGRNTT 8
V CG N T
Sbjct: 73 VQCGSNCT 80
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 DCGRNTT 8
D G+NTT
Sbjct: 1282 DIGQNTT 1288
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 4 GRNTTYQ 10
G N TYQ
Sbjct: 409 GTNATYQ 415
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 4 GRNTTYQ 10
G+N TY+
Sbjct: 513 GKNVTYE 519
>sp|PG164_VAR67|PROTEIN OPG164|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 DCGRNTTYQ 10
DC T YQ
Sbjct: 125 DCNEQTIYQ 133
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 2 DCGRNTTYQ 10
D G TYQ
Sbjct: 347 DIGEGLTYQ 355
52|Sequence|256|265|NTTYQLGQSE
>sp|FUS_HMPVC|FUSION glycoprotein F0|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 NTTYQLGQSE 10
NT YQL + E
Sbjct: 422 NTVYQLSKVE 431
>sp|DNBI_ADE12|PROBABLE DNA-binding protein|Human adenovirus A serotype 12
Query: 1 NTTYQL 6
NTT+QL
Sbjct: 113 NTTWQL 118
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 3 TYQLGQSE 10
TY+LG+ E
Sbjct: 596 TYRLGEVE 603
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 NTTYQLGQSE 10
NT Y + QSE
Sbjct: 1796 NTIYIVKQSE 1805
53|Sequence|261|274|LGQSEYLNVLQPQQ
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 1 LGQSEYLN--VLQPQQ 14
LG+ EYLN +LQPQ+
Sbjct: 485 LGEEEYLNNSLLQPQR 500
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 1 LGQSEYLN--VLQPQQ 14
LG+ EYLN +LQPQ+
Sbjct: 485 LGEEEYLNNSLLQPQR 500
>sp|ORF10_HHV8P|PROTEIN ORF10|Human herpesvirus 8 type P
Query: 2 GQSEYLNVLQPQ 13
G+ E+L V PQ
Sbjct: 332 GKHEHLTVFNPQ 343
>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12
Query: 2 GQSEYLN 8
G+SEYLN
Sbjct: 478 GESEYLN 484
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 4 SEYLNVLQPQQ 14
+ + +LQPQ+
Sbjct: 2858 THFFGILQPQE 2868
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 LGQSEYLNVL 10
GQ EY N++
Sbjct: 217 FGQKEYYNII 226
>sp|VE7_HPV28|PROTEIN E7|Human papillomavirus 28
Query: 1 LGQSEYLNVLQPQQ 14
L + +Y NV +P Q
Sbjct: 28 LDEEDYTNVEEPAQ 41
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 1 LGQSEYLNVL 10
GQ EY N++
Sbjct: 217 FGQREYYNII 226
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 6 YLNVLQPQQ 14
YLN ++P++
Sbjct: 1071 YLNFVEPEE 1079
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 6 YLNVLQPQQ 14
YLN ++P++
Sbjct: 1071 YLNFVEPEE 1079
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 6 YLNVLQPQQ 14
YLN ++P++
Sbjct: 1071 YLNFVEPEE 1079
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 6 YLNVLQPQQ 14
YLN ++P++
Sbjct: 1071 YLNFVEPEE 1079
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 6 YLNVLQPQQ 14
YLN ++P++
Sbjct: 1071 YLNFVEPEE 1079
>sp|UL32_HHV7J|PACKAGING protein UL32|Human herpesvirus 7 (strain JI)
Query: 3 QSEYLNVLQ 11
Q+EYLN ++
Sbjct: 422 QNEYLNSVE 430
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 4 SEYLNVLQP 12
SE LN+ QP
Sbjct: 559 SEQLNMSQP 567
>sp|MATRX_CHAV|MATRIX protein|Chandipura virus (strain I653514) (CHPV)
Query: 1 LGQSEYLNVLQP 12
LG+++ L+ L+P
Sbjct: 180 LGETDTLSELEP 191