SYWM_HUMAN Blast OutputR
Viruses
1|SequenceR|10|1|RAKRMSHLAM

>sp|PYHD_NPVSF|POLYHEDRIN frugiperda nuclear polyhedrosis virus

Query: 2 AKRMSHLAM 10
AKR HLA+
Sbjct: 32 AKRKEHLAL 40




2|SequenceR|15|6|FSWRERAKRM

>sp|TAPFS_BPP2|TAIL assembly protein E'|Escherichia phage P2 (Bacteriophage P2)

Query: 2 SWRERAKR 9
+WRE+A R
Sbjct: 128 TWREKALR 135


>sp|CATV_NPVLD|VIRAL cathepsin|Lymantria dispar multicapsid nuclear polyhedrosis

Query: 1 FSWRERAK 8
F WRE+ K
Sbjct: 148 FDWREQNK 155


>sp|NCAP_SFSV|NUCLEOPROTEIN fever sicilian virus (SFS)

Query: 2 SWRERAKRM 10
SW E AK+M
Sbjct: 49 SWEEDAKKM 57


>sp|POLG_BYMV|GENOME polyprotein|Bean yellow mosaic virus

Query: 2 SWRERAK 8
SWR RAK
Sbjct: 922 SWRVRAK 928




3|SequenceR|20|11|HLARIFSWRE

>sp|Y112_ABVP|PUTATIVE transmembrane protein ORF112|Acidianus bottle-shaped virus (isolate

Query: 2 LARIFSWR 9
L+++F WR
Sbjct: 105 LSKVFKWR 112


>sp|RDRP_BPFR|RNA-DIRECTED RNA polymerase beta chain|Enterobacteria phage fr (Bacteriophage

Query: 2 LARIFSWRE 10
LARI WR+
Sbjct: 481 LARIARWRK 489


>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5 IFSWRE 10
IFSWR+
Sbjct: 283 IFSWRD 288


>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5 IFSWRE 10
IFSWR+
Sbjct: 283 IFSWRD 288


>sp|RDRP_TNVD|RNA-DIRECTED RNA polymerase|Tobacco necrosis virus (strain D)

Query: 2 LARIFSWR 9
LAR+ SW+
Sbjct: 462 LARLLSWQ 469




4|SequenceR|25|16|AASGKHLARI

>sp|VE2_HPV49|REGULATORY protein E2|Human papillomavirus type 49

Query: 3 SGKHLARI 10
SG+HL R+
Sbjct: 388 SGRHLGRL 395




5|SequenceR|30|21|QLAPAAASGK

>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)

Query: 1 QLAPAAASGK 10
+L PAA SGK
Sbjct: 119 ELLPAATSGK 128


>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)

Query: 1 QLAPAAASGK 10
+L PAA SGK
Sbjct: 119 ELLPAATSGK 128


>sp|VG07_BPST6|DNA transfer protein gp7|Salmonella phage ST64T (Bacteriophage ST64T)

Query: 1 QLAPAAASG 9
QLAP AA+G
Sbjct: 56 QLAPYAAAG 64




6|SequenceR|35|26|KKSDKQLAPA

***** No hits found ******


7|SequenceR|40|31|GSFVRKKSDK

>sp|MATRX_RINDK|MATRIX protein|Rinderpest virus (strain Kabete O)

Query: 1 GSFVRKKSD 9
G+F RKK+D
Sbjct: 222 GNFQRKKTD 230


>sp|MATRX_MEASB|MATRIX protein|Measles virus (strain Biken) (MeV)

Query: 1 GSFVRKKSD 9
G+F RKKS+
Sbjct: 222 GNFRRKKSE 230


>sp|MATRX_MEASC|MATRIX protein|Measles virus (strain Ichinose-B95a) (MeV)

Query: 1 GSFVRKKSD 9
G+F RKKS+
Sbjct: 222 GNFRRKKSE 230


>sp|MATRX_MEASI|MATRIX protein|Measles virus (strain IP-3-Ca) (MeV)

Query: 1 GSFVRKKSD 9
G+F RKKS+
Sbjct: 222 GNFRRKKSE 230


>sp|MATRX_MEASU|MATRIX protein|Measles virus (strain Hu2) (MeV)

Query: 1 GSFVRKKSD 9
G+F RKKS+
Sbjct: 222 GNFRRKKSE 230


>sp|MATRX_MEASH|MATRIX protein|Measles virus (strain Halle) (MeV)

Query: 1 GSFVRKKSD 9
G+F RKKS+
Sbjct: 222 GNFRRKKSE 230


>sp|MATRX_MEASE|MATRIX protein|Measles virus (strain Edmonston) (MeV)

Query: 1 GSFVRKKSD 9
G+F RKKS+
Sbjct: 222 GNFRRKKSE 230


>sp|MATRX_MEASA|MATRIX protein|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 1 GSFVRKKSD 9
G+F RKKS+
Sbjct: 222 GNFRRKKSE 230


>sp|RDRP_BPGA|RNA-DIRECTED RNA polymerase beta chain|Enterobacteria phage GA (Bacteriophage

Query: 1 GSFVRKK 7
GSF+RK+
Sbjct: 223 GSFIRKR 229




8|SequenceR|45|36|GTPQIGSFVR

>sp|VP75_ALHV1|PROBABLE membrane antigen 75|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 GTPQIGSFVR 10
G+P +G FVR
Sbjct: 333 GSPTVGGFVR 342


>sp|RIR1_PSHV1|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 GTPQIGSF 8
GTP IG+F
Sbjct: 486 GTPPIGTF 493


>sp|DPOL_ALHV1|DNA polymerase catalytic subunit|Alcelaphine herpesvirus 1 (strain

Query: 2 TPQIGSFVR 10
TPQ G+F+R
Sbjct: 436 TPQEGNFMR 444


>sp|NEEDL_BPHK6|TAIL needle protein gp26|Enterobacteria phage HK620 (Bacteriophage

Query: 1 GTPQIGSF 8
GTP +GSF
Sbjct: 181 GTPLLGSF 188


>sp|NCAP_BDVV|NUCLEOPROTEIN disease virus (strain V)

Query: 1 GTPQIGSFV 9
G P +GSFV
Sbjct: 199 GQPWVGSFV 207


>sp|AN_VZVO|ALKALINE nuclease|Varicella-zoster virus (strain Oka vaccine)

Query: 1 GTPQIGSF 8
GTP+IG++
Sbjct: 235 GTPRIGTY 242


>sp|E311_ADE05|EARLY E3A 10.5 kDa glycoprotein|Human adenovirus C serotype 5

Query: 2 TPQIGSFV 9
TPQ+ +FV
Sbjct: 19 TPQVSAFV 26


>sp|NCAP_BDV1|NUCLEOPROTEIN disease virus 1 (BoDV-1)

Query: 1 GTPQIGSFV 9
G P +GSFV
Sbjct: 199 GQPWVGSFV 207


>sp|AN_VZVD|ALKALINE nuclease|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 GTPQIGSF 8
GTP+IG++
Sbjct: 235 GTPRIGTY 242


>sp|REX_HTL1C|PROTEIN Rex|Human T-cell leukemia virus 1

Query: 1 GTPQIGSFVR 10
G P +G +VR
Sbjct: 47 GAPSLGDYVR 56


>sp|REX_HTL1A|PROTEIN Rex|Human T-cell leukemia virus 1

Query: 1 GTPQIGSFVR 10
G P +G +VR
Sbjct: 47 GAPSLGDYVR 56


>sp|HEMA_BRV2|HEMAGGLUTININ-ESTERASE virus 2 (BRV-2)

Query: 1 GTPQIGS 7
TPQIGS
Sbjct: 232 ATPQIGS 238


>sp|HEMA_BRV1|HEMAGGLUTININ-ESTERASE virus 1 (BRV-1)

Query: 1 GTPQIGS 7
TPQIGS
Sbjct: 232 ATPQIGS 238


>sp|REX_HTL1L|PROTEIN Rex|Human T-cell leukemia virus 1

Query: 1 GTPQIGSFVR 10
G P +G +VR
Sbjct: 47 GAPSLGDYVR 56


>sp|REX_HTL1F|PROTEIN Rex|Human T-cell leukemia virus 1

Query: 1 GTPQIGSFVR 10
G P +G +VR
Sbjct: 47 GAPSLGDYVR 56




9|SequenceR|50|41|GLHLIGTPQI

>sp|YL226_MIMIV|UNCHARACTERIZED protein L226|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 LHLIGTPQI 10
LHL+G P I
Sbjct: 657 LHLMGYPNI 665


>sp|DNBI_PSHV1|MAJOR DNA-binding protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 GLHLIGTPQI 10
GLH +G P +
Sbjct: 419 GLHTLGCPTV 428


>sp|POLS_ABPVR|STRUCTURAL polyprotein|Acute bee paralysis virus (strain

Query: 4 LIGTPQ 9
LIGTPQ
Sbjct: 889 LIGTPQ 894


>sp|GLYC_TACVT|PRE-GLYCOPROTEIN polyprotein GP complex|Tacaribe virus (strain TRVL 11598)

Query: 2 LHLIGTP 8
LHLIG P
Sbjct: 437 LHLIGFP 443


>sp|GLYC_TACVF|PRE-GLYCOPROTEIN polyprotein GP complex|Tacaribe virus (strain Franze-Fernandez)

Query: 2 LHLIGTP 8
LHLIG P
Sbjct: 449 LHLIGFP 455


>sp|GLYC_TACV7|PRE-GLYCOPROTEIN polyprotein GP complex|Tacaribe virus (strain V7) (TCRV)

Query: 2 LHLIGTP 8
LHLIG P
Sbjct: 436 LHLIGFP 442


>sp|GLYC_TACV5|PRE-GLYCOPROTEIN polyprotein GP complex|Tacaribe virus (strain V5) (TCRV)

Query: 2 LHLIGTP 8
LHLIG P
Sbjct: 437 LHLIGFP 443


>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)

Query: 2 LHLIGTP 8
LHL+G P
Sbjct: 450 LHLVGIP 456


>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn

Query: 2 LHLIGTP 8
LHL+G P
Sbjct: 439 LHLVGIP 445


>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 GLHLIGT 7
LHLIGT
Sbjct: 113 ALHLIGT 119


>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 GLHLIGT 7
LHLIGT
Sbjct: 112 ALHLIGT 118


>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 GLHLIGT 7
LHLIGT
Sbjct: 113 ALHLIGT 119


>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)

Query: 1 GLHLIGTPQI 10
G HLI TP +
Sbjct: 369 GGHLIDTPAV 378




10|SequenceR|55|46|AGLYNGLHLI

>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40

Query: 1 AGLYNGLH 8
AGLY+GLH
Sbjct: 9 AGLYSGLH 16


>sp|VP5_RRSVT|PUTATIVE minor structural protein VP5|Rice ragged stunt virus (isolate

Query: 2 GLYNGLHLI 10
G+YNG+ LI
Sbjct: 513 GIYNGMKLI 521


>sp|RDRP_BNYVS|REPLICASE necrotic yellow vein virus

Query: 2 GLYNGLHL 9
G+Y GLHL
Sbjct: 1212 GMYLGLHL 1219


>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41

Query: 1 AGLYNGLH 8
G+Y+GLH
Sbjct: 9 GGIYSGLH 16


>sp|VP03_SHV21|PROBABLE membrane antigen 3|Saimiriine herpesvirus 2 (strain 11)

Query: 3 LYNGLHLI 10
LY+GLH I
Sbjct: 241 LYDGLHAI 248


>sp|OE66_NPVLS|OCCLUSION-DERIVED virus envelope protein E66|Leucania separata nucleopolyhedrovirus

Query: 2 GLYNGLHLI 10
GLY +HLI
Sbjct: 87 GLYEAMHLI 95


>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)

Query: 3 LYNGLH 8
YNGLH
Sbjct: 228 FYNGLH 233


>sp|NS3B_BCHK4|NON-STRUCTURAL protein 3b|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 AGLYNGLHL 9
AGL NG+ L
Sbjct: 84 AGLLNGMEL 92


>sp|NS3B_BC133|NON-STRUCTURAL protein 3b|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 AGLYNGLHL 9
AGL NG+ L
Sbjct: 84 AGLLNGMEL 92


>sp|CAP3_ADEG1|PRE-HEXON-LINKING protein IIIa|Fowl adenovirus A serotype 1

Query: 1 AGLYNGLHLI 10
AGLY G ++I
Sbjct: 386 AGLYTGNYVI 395


>sp|MCAR_MIMIV|MITOCHONDRIAL carrier-like protein L276|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 LYNGLHL 9
LYNGL+L
Sbjct: 196 LYNGLNL 202




11|SequenceR|60|51|VWSEIAGLYN

>sp|Y098_OSHVF|UNCHARACTERIZED protein ORF98|Ostreid herpesvirus 1 (isolate France)

Query: 1 VWSEIAGLYN 10
+W+EIA +YN
Sbjct: 326 LWNEIARMYN 335


>sp|DPOL_NPVBM|DNA polymerase|Bombyx mori nuclear polyhedrosis virus

Query: 2 WSEIAGLYN 10
W+E+ +YN
Sbjct: 371 WTEMVKMYN 379


>sp|DPOL_NPVAC|DNA polymerase|Autographa californica nuclear polyhedrosis virus

Query: 2 WSEIAGLYN 10
W+E+ +YN
Sbjct: 371 WTEMVKMYN 379


>sp|AIMR_BPSPB|AIMR transcriptional regulator|Bacillus phage SPbeta (Bacillus phage

Query: 2 WSEIAGLYN 10
W+ +AGL N
Sbjct: 22 WATVAGLKN 30


>sp|ORF3_PSHV1|UNCHARACTERIZED protein sORF3/4|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 VWSEIA 6
VWSE+A
Sbjct: 34 VWSEVA 39


>sp|VP16_HHV1F|TEGUMENT protein VP16|Human herpesvirus 1 (strain F)

Query: 2 WSEIAGLY 9
W ++AGL+
Sbjct: 263 WRQLAGLF 270


>sp|VP16_HHV11|TEGUMENT protein VP16|Human herpesvirus 1 (strain 17)

Query: 2 WSEIAGLY 9
W ++AGL+
Sbjct: 263 WRQLAGLF 270


>sp|RDRP_APRVF|RNA-DIRECTED RNA polymerase VP2|Aedes pseudoscutellaris reovirus (isolate

Query: 1 VWSEIAGL 8
+WS I+G+
Sbjct: 143 IWSNISGI 150




12|SequenceR|65|56|EDQLRVWSEI

>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA

Query: 1 EDQLRVWSEI 10
+D LRVW+++
Sbjct: 3247 DDMLRVWNDV 3256


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 1 EDQLRVWSEI 10
ED LR+W+++
Sbjct: 3320 EDMLRIWNKV 3329


>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 EDQLRVWSEI 10
E +RVWSE+
Sbjct: 204 ELTIRVWSEL 213


>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 EDQLRVWSEI 10
E +RVWSE+
Sbjct: 183 ELTIRVWSEL 192


>sp|POLG_HAVS2|GENOME polyprotein|Simian hepatitis A virus genotype

Query: 1 EDQLRVWSEI 10
E +RVWSE+
Sbjct: 208 ELTIRVWSEL 217


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 EDQLRVWSEI 10
E +RVWSE+
Sbjct: 204 ELTIRVWSEL 213


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 EDQLRVWSEI 10
E +RVWSE+
Sbjct: 204 ELTIRVWSEL 213


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 EDQLRVWSEI 10
E +RVWSE+
Sbjct: 204 ELTIRVWSEL 213


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 EDQLRVWSEI 10
E +RVWSE+
Sbjct: 204 ELTIRVWSEL 213


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 EDQLRVWSEI 10
E +RVWSE+
Sbjct: 204 ELTIRVWSEL 213


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 EDQLRVWSEI 10
E +RVWSE+
Sbjct: 204 ELTIRVWSEL 213


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 EDQLRVWSEI 10
E +RVWSE+
Sbjct: 204 ELTIRVWSEL 213


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 EDQLRVWSEI 10
E +RVWSE+
Sbjct: 204 ELTIRVWSEL 213


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 EDQLRVWSEI 10
E +RVWSE+
Sbjct: 204 ELTIRVWSEL 213


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 EDQLRVWSEI 10
E +RVWSE+
Sbjct: 204 ELTIRVWSEL 213


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 EDQLRVWSEI 10
ED L+VW+ +
Sbjct: 3295 EDMLKVWNRV 3304


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 EDQLRVWSEI 10
ED L+VW+ +
Sbjct: 3295 EDMLKVWNRV 3304


>sp|POLG_HAVSC|GENOME polyprotein|Simian hepatitis A virus genotype

Query: 1 EDQLRVWSE 9
E +RVWSE
Sbjct: 204 ELTIRVWSE 212


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 EDQLRVWSEI 10
ED L+VW+ +
Sbjct: 3295 EDMLKVWNRV 3304


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 EDQLRVWSEI 10
ED L+VW+ +
Sbjct: 3295 EDMLKVWNRV 3304


>sp|HEMA_INBYB|HEMAGGLUTININ B virus (strain B/Yamagata/16/1988)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 183 EDQITVW 189


>sp|HEMA_INBVM|HEMAGGLUTININ B virus (strain B/Victoria/19/1989)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 200 EDQITVW 206


>sp|HEMA_INBVL|HEMAGGLUTININ B virus (strain B/Victoria/103/1989)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 198 EDQITVW 204


>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 200 EDQITVW 206


>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 193 EDQITVW 199


>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 191 EDQITVW 197


>sp|HEMA_INBTF|HEMAGGLUTININ B virus (strain B/Texas/4/1990)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 198 EDQITVW 204


>sp|HEMA_INBTE|HEMAGGLUTININ B virus (strain B/Texas/1/1991)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 198 EDQITVW 204


>sp|HEMA_INBSJ|HEMAGGLUTININ B virus (strain B/Singapore/1964)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 195 EDQITVW 201


>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 198 EDQITVW 204


>sp|HEMA_INBSD|HEMAGGLUTININ B virus (strain B/South

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 198 EDQITVW 204


>sp|HEMA_INBP9|HEMAGGLUTININ B virus (strain B/Panama/45/1990)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 198 EDQITVW 204


>sp|HEMA_INBP3|HEMAGGLUTININ B virus (strain B/Paris/329/1990)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 200 EDQITVW 206


>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 198 EDQITVW 204


>sp|HEMA_INBNY|HEMAGGLUTININ B virus (strain B/New

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 198 EDQITVW 204


>sp|HEMA_INBNA|HEMAGGLUTININ B virus (strain B/Nagasaki/1/1987)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 185 EDQITVW 191


>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 193 EDQITVW 199


>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 189 EDQITVW 195


>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 199 EDQITVW 205


>sp|HEMA_INBIN|HEMAGGLUTININ B virus (strain B/India/3/1989)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 200 EDQITVW 206


>sp|HEMA_INB|HEMAGGLUTININ B virus (strain B/ID/1986)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 196 EDQITVW 202


>sp|HEMA_INBIB|HEMAGGLUTININ B virus (strain B/Ibaraki/2/1985)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 185 EDQITVW 191


>sp|HEMA_INBHM|HEMAGGLUTININ B virus (strain B/Hong

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 198 EDQITVW 204


>sp|HEMA_INBHL|HEMAGGLUTININ B virus (strain B/Hong

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 198 EDQITVW 204


>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 190 EDQITVW 196


>sp|HEMA_INBGL|HEMAGGLUTININ B virus (strain B/GL/1954)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 193 EDQITVW 199


>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 198 EDQITVW 204


>sp|HEMA_INBFU|HEMAGGLUTININ B virus (strain B/Fukuoka/80/1981)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 183 EDQITVW 189


>sp|HEMA_INBF9|HEMAGGLUTININ B virus (strain B/Finland/151/1990)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 185 EDQITVW 191


>sp|HEMA_INBF8|HEMAGGLUTININ B virus (strain B/Finland/150/1990)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 185 EDQITVW 191


>sp|HEMA_INBF7|HEMAGGLUTININ B virus (strain B/Finland/149/1990)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 185 EDQITVW 191


>sp|HEMA_INBF6|HEMAGGLUTININ B virus (strain B/Finland/148/1990)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 185 EDQITVW 191


>sp|HEMA_INBF5|HEMAGGLUTININ B virus (strain B/Finland/147/1990)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 185 EDQITVW 191


>sp|HEMA_INBF4|HEMAGGLUTININ B virus (strain B/Finland/146/1990)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 185 EDQITVW 191


>sp|HEMA_INBF3|HEMAGGLUTININ B virus (strain B/Finland/145/1990)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 185 EDQITVW 191


>sp|HEMA_INBF2|HEMAGGLUTININ B virus (strain B/Finland/56/1988)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 185 EDQITVW 191


>sp|HEMA_INBF1|HEMAGGLUTININ B virus (strain B/Finland/24/1985)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 185 EDQITVW 191


>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 198 EDQITVW 204


>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 190 EDQITVW 196


>sp|HEMA_INBBK|HEMAGGLUTININ B virus (strain B/Bangkok/163/1990)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 198 EDQITVW 204


>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 200 EDQITVW 206


>sp|HEMA_INBAA|HEMAGGLUTININ B virus (strain B/Ann

Query: 1 EDQLRVW 7
EDQ+ VW
Sbjct: 192 EDQITVW 198


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 EDQLRVWSEI 10
ED L+VW+ +
Sbjct: 3295 EDMLKVWNRV 3304


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 1 EDQLRVWSEI 10
ED L+VW+ +
Sbjct: 3330 EDMLQVWNRV 3339


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 1 EDQLRVWSEI 10
ED+L VW+ +
Sbjct: 3317 EDRLEVWNRV 3326


>sp|VG59_SHV21|GENE 59 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 4 LRVWSEI 10
LR+WS I
Sbjct: 50 LRIWSSI 56


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 1 EDQLRVWSEI 10
ED L+VW+ +
Sbjct: 3339 EDMLQVWNRV 3348


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 1 EDQLRVWSEI 10
ED L+VW+ +
Sbjct: 3339 EDMLQVWNRV 3348


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1 EDQLRVWSEI 10
ED L+VW+ +
Sbjct: 3310 EDMLQVWNRV 3319


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 1 EDQLRVWSEI 10
ED L+VW+ +
Sbjct: 3339 EDMLQVWNRV 3348


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 1 EDQLRVWSEI 10
ED L+VW+ +
Sbjct: 3339 EDMLQVWNRV 3348


>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human

Query: 1 EDQLRVWSE 9
ED+LR++ E
Sbjct: 694 EDELRIYEE 702


>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a

Query: 1 EDQLRVWSEI 10
EDQ++ W+++
Sbjct: 27 EDQIKHWAQV 36


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 1 EDQLRVWSEI 10
ED L VW+ +
Sbjct: 3335 EDMLEVWNRV 3344


>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)

Query: 1 EDQLRVWSE 9
E +LR WS+
Sbjct: 99 ESELRTWSK 107


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 EDQLRVWSEI 10
ED L VW+ +
Sbjct: 3317 EDMLEVWNRV 3326


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 1 EDQLRVWSEI 10
ED L VW+ +
Sbjct: 3317 EDMLEVWNRV 3326


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 1 EDQLRVWSEI 10
ED L VW+ +
Sbjct: 3317 EDMLEVWNRV 3326


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 1 EDQLRVWSEI 10
ED L VW+ +
Sbjct: 3317 EDMLEVWNRV 3326


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 1 EDQLRVWSEI 10
ED L VW+ +
Sbjct: 3340 EDMLEVWNRV 3349


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 1 EDQLRVWSEI 10
ED L VW+ +
Sbjct: 3340 EDMLEVWNRV 3349


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 1 EDQLRVWSEI 10
ED L VW+ +
Sbjct: 3336 EDMLSVWNRV 3345


>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27

Query: 1 EDQLRVWSEI 10
EDQ++ W+++
Sbjct: 27 EDQIKHWAQV 36


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 1 EDQLRVWSEI 10
ED L VW+ +
Sbjct: 3321 EDMLEVWNRV 3330


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 1 EDQLRVWSEI 10
ED L VW+ +
Sbjct: 3341 EDMLSVWNRV 3350


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 1 EDQLRVWSEI 10
ED L VW+ +
Sbjct: 3321 EDMLEVWNRV 3330


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 1 EDQLRVWSEI 10
ED L VW+ +
Sbjct: 3319 EDMLEVWNRV 3328


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 EDQLRVWSEI 10
ED L VW+++
Sbjct: 3295 EDMLTVWNKV 3304


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 1 EDQLRVWSEI 10
ED L VW+ +
Sbjct: 3332 EDMLAVWNRV 3341


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 EDQLRVWSEI 10
ED L VW+ +
Sbjct: 3299 EDMLSVWNRV 3308


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 EDQLRVWSEI 10
ED L VW+ +
Sbjct: 3299 EDMLSVWNRV 3308


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 EDQLRVWSEI 10
ED L VW+ +
Sbjct: 3298 EDMLSVWNRV 3307




13|SequenceR|70|61|LVSDYEDQLR

>sp|PORTL_BPP22|PORTAL protein|Salmonella phage P22 (Bacteriophage P22)

Query: 1 LVSDYEDQ 8
LV+DYEDQ
Sbjct: 128 LVTDYEDQ 135


>sp|POL_COYMV|POLYPROTEIN P3|Commelina yellow mottle virus (CoYMV)

Query: 2 VSDYEDQLR 10
V +YEDQ+R
Sbjct: 23 VPEYEDQIR 31


>sp|YL191_MIMIV|UNCHARACTERIZED protein L191|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 LVSDYEDQLR 10
LV+DY+D L
Sbjct: 123 LVTDYQDTLH 132


>sp|L_IPPYV|RNA-DIRECTED RNA polymerase L|Ippy mammarenavirus (isolate Rat/Central African

Query: 3 SDYEDQLR 10
SDY DQL+
Sbjct: 897 SDYMDQLK 904


>sp|Y301_ATV|UNCHARACTERIZED protein ORF301|Acidianus two-tailed virus (ATV)

Query: 1 LVSDYEDQL 9
L+S+Y+DQ+
Sbjct: 161 LLSEYKDQV 169




14|SequenceR|75|66|DVISYLVSDY

>sp|CPRT_PMTVS|91 kDa readthrough protein|Potato mop-top virus (isolate

Query: 1 DVISYLVS 8
D+I+YLVS
Sbjct: 569 DIIAYLVS 576


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 1 DVISYLVSDY 10
DV SY+ S+Y
Sbjct: 187 DVYSYIASEY 196


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 1 DVISYLVSDY 10
DV SY+ S+Y
Sbjct: 187 DVYSYIASEY 196


>sp|UL79_ELHVK|PROTEIN U52|Elephantid herpesvirus 1 (isolate Asian

Query: 2 VISYLVSDY 10
++SYL SDY
Sbjct: 239 ILSYLQSDY 247


>sp|END7_BPT4|RECOMBINATION endonuclease VII|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 DVISYLVSDY 10
++++YL SDY
Sbjct: 90 NLLTYLKSDY 99


>sp|YR810_MIMIV|PUTATIVE ankyrin repeat protein R810|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DVISYLVSD 9
DV+ YLVS+
Sbjct: 117 DVVKYLVSN 125


>sp|PP220_ASFWA|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 DVISYLVSDY 10
DVIS++ S Y
Sbjct: 1949 DVISFVESSY 1958


>sp|PP220_ASFP4|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 DVISYLVSDY 10
DVIS++ S Y
Sbjct: 1949 DVISFVESSY 1958


>sp|PP220_ASFM2|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 DVISYLVSDY 10
DVIS++ S Y
Sbjct: 1949 DVISFVESSY 1958


>sp|PP220_ASFK5|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 DVISYLVSDY 10
DVIS++ S Y
Sbjct: 1949 DVISFVESSY 1958


>sp|PP220_ASFB7|POLYPROTEIN pp220|African swine fever virus (strain

Query: 1 DVISYLVSDY 10
DVIS++ S Y
Sbjct: 1950 DVISFVESSY 1959


>sp|YR911_MIMIV|PUTATIVE ankyrin repeat protein R911|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DVISYLVS 8
DVI YLVS
Sbjct: 394 DVIKYLVS 401




15|SequenceR|80|71|TISHLDVISY

>sp|RDRP_PMTVS|REPLICASE large subunit|Potato mop-top virus (isolate Potato/Sweden/Sw)

Query: 1 TISHLDVISY 10
T+S +DV SY
Sbjct: 1476 TLSEIDVTSY 1485


>sp|YR777_MIMIV|PUTATIVE ankyrin repeat protein R777|Acanthamoeba polyphaga mimivirus

Query: 4 HLDVISY 10
HLDV+SY
Sbjct: 75 HLDVVSY 81


>sp|L_SV41|RNA-DIRECTED RNA polymerase L|Simian virus 41 (SV41)

Query: 2 ISHLDVISY 10
I+HLD +SY
Sbjct: 1423 IAHLDYLSY 1431


>sp|NS2_BANNV|NON-STRUCTURAL protein 2|Banna virus (BAV)

Query: 1 TISHLDV 7
T+SHLDV
Sbjct: 251 TLSHLDV 257


>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain

Query: 2 ISHLDVISY 10
I+HLD +SY
Sbjct: 1417 IAHLDYLSY 1425


>sp|023R_FRG3G|UNCHARACTERIZED protein 023R|Frog virus 3 (isolate Goorha)

Query: 2 ISHLDVIS 9
+SHLD++S
Sbjct: 233 LSHLDMLS 240


>sp|OE66_NPVOP|OCCLUSION-DERIVED virus envelope protein E66|Orgyia pseudotsugata multicapsid

Query: 2 ISHLDVISY 10
I HLDV +Y
Sbjct: 266 IDHLDVRAY 274


>sp|YR896_MIMIV|PUTATIVE ankyrin repeat protein R896|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 HLDVISY 10
HLDV+ Y
Sbjct: 202 HLDVVEY 208


>sp|YL014_MIMIV|PUTATIVE ankyrin repeat protein L14|Acanthamoeba polyphaga mimivirus

Query: 3 SHLDVISY 10
HLDV+ Y
Sbjct: 91 GHLDVVEY 98




16|SequenceR|85|76|PDQPVTISHL

>sp|SPIKE_ADE1H|FIBER protein|Human adenovirus D serotype 15/H9

Query: 1 PDQPVTI 7
PDQPVTI
Sbjct: 314 PDQPVTI 320


>sp|SPIKE_ADE09|FIBER protein|Human adenovirus D serotype 9

Query: 1 PDQPVTI 7
PDQPVTI
Sbjct: 314 PDQPVTI 320


>sp|PHOSP_TUPVT|PHOSPHOPROTEIN virus (isolate Tupaia/Thailand/-/1986) (TUPV)

Query: 1 PDQPVTISH 9
P QPV +SH
Sbjct: 255 PQQPVAVSH 263


>sp|SODC_NPVOP|PUTATIVE superoxide dismutase [Cu-Zn]|Orgyia pseudotsugata multicapsid

Query: 1 PDQPVTIS 8
PD+PV+I+
Sbjct: 22 PDEPVSIT 29


>sp|VGA8_ALHV1|UNCHARACTERIZED gene A8 protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 PDQPVTIS 8
P+QPVT+S
Sbjct: 75 PEQPVTLS 82


>sp|SPIKE_ADE08|FIBER protein|Human adenovirus D serotype 8

Query: 1 PDQPVTI 7
P QPVTI
Sbjct: 314 PHQPVTI 320


>sp|UL24_EHV1B|PROTEIN UL24 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 3 QPVTISHL 10
QPV +SH+
Sbjct: 252 QPVAVSHV 259


>sp|UL24_EHV1V|PROTEIN UL24 homolog|Equine herpesvirus 1 (strain V592)

Query: 3 QPVTISHL 10
QPV +SH+
Sbjct: 252 QPVAVSHV 259


>sp|CHLE_MIMIV|PROBABLE cholinesterase|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PDQPVTI 7
PDQP+++
Sbjct: 306 PDQPISL 312


>sp|Y14B_BPT4|UNCHARACTERIZED 10.1 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 PDQPVTI 7
P+QP+TI
Sbjct: 27 PEQPITI 33


>sp|UL24_EHV1|PROTEIN UL24 homolog|Equine herpesvirus 1 (strain HVS25A)

Query: 3 QPVTISHL 10
QPV +SH+
Sbjct: 252 QPVAVSHV 259


>sp|KITH_EHV2|THYMIDINE kinase|Equine herpesvirus 2 (strain 86/87)

Query: 3 QPVTISH 9
QPVT+ H
Sbjct: 177 QPVTVKH 183


>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3 QPVTISHL 10
QP+ ISHL
Sbjct: 725 QPLQISHL 732


>sp|PHOSP_PIRYV|PHOSPHOPROTEIN virus (PIRYV)

Query: 3 QPVTISH 9
QPVT+SH
Sbjct: 190 QPVTLSH 196




17|SequenceR|90|81|QRLVAPDQPV

>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 2 RLVAPDQPV 10
+L+APD P+
Sbjct: 428 KLLAPDHPL 436


>sp|Y273_ATV|STRUCTURAL protein ORF273|Acidianus two-tailed virus (ATV)

Query: 1 QRLVAPDQPV 10
+R+VA +QP+
Sbjct: 195 ERIVAEEQPI 204


>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)

Query: 3 LVAPDQP 9
+ APDQP
Sbjct: 182 MTAPDQP 188


>sp|NCAP_PI2HT|NUCLEOPROTEIN parainfluenza 2 virus (strain

Query: 3 LVAPDQP 9
+ APDQP
Sbjct: 182 MTAPDQP 188


>sp|VL2_HPV11|MINOR capsid protein L2|Human papillomavirus 11

Query: 1 QRLVAPDQPV 10
QRLV D PV
Sbjct: 243 QRLVTYDNPV 252


>sp|NCAP_SV41|NUCLEOPROTEIN virus 41 (SV41)

Query: 3 LVAPDQP 9
+ APDQP
Sbjct: 182 MTAPDQP 188




18|SequenceR|95|86|MDLISQRLVA

>sp|RDRP_LOLV|RNA-DIRECTED RNA polymerase|Lolium latent virus (isolate Lolium/USA/US1/-)

Query: 2 DLISQRLVA 10
D+I QR+VA
Sbjct: 696 DVIGQRMVA 704




19|SequenceR|100|91|LLVATMDLIS

>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)

Query: 1 LLVATMDLIS 10
LLV T D+IS
Sbjct: 335 LLVETTDIIS 344




20|SequenceR|105|96|NIGCALLVAT

>sp|Y024_HIS1I|PUTATIVE transmembrane protein ORF24|His1 virus (isolate

Query: 1 NIGCALLVAT 10
N+G ALL+AT
Sbjct: 17 NMGLALLLAT 26




21|SequenceR|110|101|ISKEPNIGCA

>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)

Query: 1 ISKEPNIGCA 10
I K PNI CA
Sbjct: 330 IPKHPNITCA 339


>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 ISKEPNIG 8
+SKEPN G
Sbjct: 915 LSKEPNFG 922


>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)

Query: 1 ISKEPNIG 8
+SKEPN G
Sbjct: 915 LSKEPNFG 922


>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain

Query: 1 ISKEPNIGCA 10
I K PNI CA
Sbjct: 330 IPKHPNITCA 339


>sp|ENV_SIVS4|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate

Query: 1 ISKEPNIGC 9
+ +EP IGC
Sbjct: 162 LEQEPMIGC 170


>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)

Query: 1 ISKEPNIG 8
++KEPN G
Sbjct: 914 LTKEPNFG 921


>sp|ORF14_BPKHP|MAJOR structural protein ORF14|Helicobacter pylori bacteriophage KHP30

Query: 1 ISKEPNIGC 9
I+KE +IGC
Sbjct: 304 INKEISIGC 312


>sp|UNG_HHV7J|URACIL-DNA glycosylase|Human herpesvirus 7 (strain JI)

Query: 2 SKEPNIGCA 10
SK P IGC
Sbjct: 221 SKTPFIGCG 229




22|SequenceR|115|106|SQQFLISKEP

>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985

Query: 1 SQQFLISKEP 10
S+Q ++++EP
Sbjct: 110 SEQIIVTREP 119


>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974

Query: 1 SQQFLISKEP 10
S+Q ++++EP
Sbjct: 108 SEQIIVTREP 117


>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956

Query: 1 SQQFLISKEP 10
S+Q ++++EP
Sbjct: 108 SEQIIVTREP 117


>sp|NRAM_I49A1|NEURAMINIDASE A virus (strain A/Duck/Germany/1949

Query: 1 SQQFLISKEP 10
S+Q ++++EP
Sbjct: 110 SEQIIVTREP 119


>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge

Query: 1 SQQFLISKEP 10
S+Q ++++EP
Sbjct: 110 SEQIIVTREP 119




23|SequenceR|120|111|HESVQSQQFL

>sp|RDRP_TMVKR|REPLICASE large subunit|Tobacco mosaic virus (strain Korean

Query: 1 HESVQSQQF 9
H+SV S+QF
Sbjct: 324 HKSVDSEQF 332


>sp|RDRP_TMVOM|REPLICASE large subunit|Tobacco mosaic virus (strain OM)

Query: 1 HESVQSQQF 9
H+SV S+QF
Sbjct: 324 HKSVDSEQF 332


>sp|RDRP_TMV|REPLICASE large subunit|Tobacco mosaic virus (strain vulgare)

Query: 1 HESVQSQQF 9
H+SV S+QF
Sbjct: 324 HKSVDSEQF 332


>sp|RDRP_TMVRA|REPLICASE large subunit|Tobacco mosaic virus (strain Rakkyo)

Query: 1 HESVQSQQF 9
H+SV S+QF
Sbjct: 324 HKSVDSEQF 332


>sp|RDRP_TMVB|REPLICASE large subunit|Tobacco mosaic virus (strain B935A)

Query: 1 HESVQSQQF 9
H+SV S+QF
Sbjct: 324 HKSVDSEQF 332




24|SequenceR|125|116|WSLQTHESVQ

>sp|5059R_ASFWA|PROTEIN MGF 505-9R|African swine fever virus (isolate

Query: 1 WSLQTHESVQ 10
W L TH++VQ
Sbjct: 51 WVLPTHKAVQ 60


>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 WSLQTHESV 9
W L +H++V
Sbjct: 705 WGLSSHDAV 713


>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 WSLQTHESV 9
W L +H++V
Sbjct: 708 WGLSSHDAV 716


>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 WSLQTHESV 9
W L +H++V
Sbjct: 709 WGLSSHDAV 717




25|SequenceR|130|121|MCSLIWSLQT

>sp|VG12_SHV21|UNCHARACTERIZED gene 12 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 MCSLIWSLQ 9
+CS IW+L+
Sbjct: 143 LCSFIWNLK 151


>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 1 MCSLIWS 7
MC +IW+
Sbjct: 1526 MCMIIWA 1532


>sp|POLG_RTSVA|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 1 MCSLIWS 7
MC +IW+
Sbjct: 1529 MCMIIWA 1535




26|SequenceR|135|126|RPLRVMCSLI

>sp|POLG_BTMV|GENOME polyprotein|Beet mosaic virus (BtMV)

Query: 1 RPLRVMCSLI 10
R +R+MCS +
Sbjct: 1012 RAMRIMCSCL 1021


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1 RPLRVMCSLI 10
R LRV CS I
Sbjct: 2405 RSLRVKCSTI 2414


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 RPLRVMCSLI 10
R LRV CS I
Sbjct: 2405 RSLRVKCSTI 2414


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 RPLRVMCSLI 10
R LRV CS I
Sbjct: 2405 RSLRVKCSTI 2414


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 RPLRVMCSLI 10
R LRV CS I
Sbjct: 2405 RSLRVKCSTI 2414


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 RPLRVMCSLI 10
R LRV CS I
Sbjct: 2405 RSLRVKCSTI 2414


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 RPLRVMCSLI 10
R LRV CS I
Sbjct: 2405 RSLRVKCSTI 2414


>sp|TERL_BPSF5|PUTATIVE terminase large subunit|Shigella phage SfV (Shigella flexneri

Query: 1 RPLRVMC 7
RP R+MC
Sbjct: 158 RPARLMC 164


>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 RPLRVMCSLI 10
R LRV CS I
Sbjct: 2405 RSLRVKCSTI 2414


>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 RPLRVMCSLI 10
R LRV CS I
Sbjct: 2405 RSLRVKCSTI 2414


>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 RPLRVMCSLI 10
R LRV CS I
Sbjct: 2405 RSLRVKCSTI 2414


>sp|VP7_AHSV9|CORE protein VP7|African horse sickness virus 9

Query: 1 RPLRVMC 7
RPLR+ C
Sbjct: 189 RPLRIFC 195


>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 RPLRVMCSLI 10
R LRV CS I
Sbjct: 2405 RSLRVKCSTI 2414


>sp|VP7_AHSV6|CORE protein VP7|African horse sickness virus 6

Query: 1 RPLRVMC 7
RPLR+ C
Sbjct: 189 RPLRIFC 195


>sp|VP7_AHSV|CORE protein VP7|African horse sickness virus (AHSV)

Query: 1 RPLRVMC 7
RPLR+ C
Sbjct: 189 RPLRIFC 195


>sp|ORFC_ELHVK|PROTEIN ORF C|Elephantid herpesvirus 1 (isolate Asian

Query: 1 RPLRVMCSL 9
RPLRV+ S+
Sbjct: 511 RPLRVLTSI 519


>sp|ICP0_EHV1V|E3 ubiquitin-protein ligase ICP0|Equine herpesvirus 1 (strain V592)

Query: 1 RPLRVMCSL 9
RP+R CSL
Sbjct: 387 RPMRPRCSL 395


>sp|ICP0_EHV1B|E3 ubiquitin-protein ligase ICP0|Equine herpesvirus 1 (strain Ab4p)

Query: 1 RPLRVMCSL 9
RP+R CSL
Sbjct: 387 RPMRPRCSL 395




27|SequenceR|140|131|HLHQLRPLRV

>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 1 HLHQLRPLR 9
LHQL+PL+
Sbjct: 1329 QLHQLKPLK 1337


>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 LHQLRPLR 9
LHQ+ PL+
Sbjct: 60 LHQIEPLK 67


>sp|AN_EHV1V|ALKALINE nuclease|Equine herpesvirus 1 (strain V592)

Query: 3 HQLRPLRV 10
HQLRP V
Sbjct: 469 HQLRPFLV 476


>sp|AN_EHV1B|ALKALINE nuclease|Equine herpesvirus 1 (strain Ab4p)

Query: 3 HQLRPLRV 10
HQLRP V
Sbjct: 469 HQLRPFLV 476


>sp|UL43_PSHV1|MEMBRANE protein UL43|Psittacid herpesvirus 1 (isolate Amazon

Query: 3 HQLRPL 8
HQ+RPL
Sbjct: 245 HQMRPL 250


>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote

Query: 1 HLHQLR 6
H+HQLR
Sbjct: 1998 HIHQLR 2003




28|SequenceR|145|136|KAKWQHLHQL

>sp|ENV_MMTVC|ENVELOPE glycoprotein gp70|Mouse mammary tumor virus (strain

Query: 1 KAKWQHLHQL 10
K WQHL L
Sbjct: 54 KTAWQHLQAL 63


>sp|ENV_MMTVB|ENVELOPE glycoprotein gp70|Mouse mammary tumor virus (strain

Query: 1 KAKWQHLHQL 10
K WQHL L
Sbjct: 54 KTAWQHLQAL 63


>sp|ENV_MMTVG|ENVELOPE glycoprotein gp70|Mouse mammary tumor virus (strain

Query: 1 KAKWQHLHQL 10
K WQHL L
Sbjct: 54 KTAWQHLQAL 63


>sp|L_MPV15|RNA-DIRECTED RNA polymerase L|Murine pneumonia virus (strain 15)

Query: 1 KAKWQHLH 8
KA W +LH
Sbjct: 1791 KAHWDYLH 1798


>sp|DPOL_ADEG1|DNA polymerase|Fowl adenovirus A serotype 1

Query: 4 WQHLH 8
WQH+H
Sbjct: 56 WQHVH 60


>sp|VP3_ROTEL|PROTEIN VP3|Rotavirus A (isolate RVA/Equine/United

Query: 3 KWQHLHQL 10
+W HLH +
Sbjct: 630 RWIHLHSV 637


>sp|F12_FOWPN|VIRION release protein|Fowlpox virus (strain NVSL) (FPV)

Query: 3 KWQHLHQL 10
KW H H L
Sbjct: 131 KWLHKHNL 138


>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 2 AKWQHLH 8
+KW H+H
Sbjct: 425 SKWMHMH 431


>sp|ENV_SFVCP|ENVELOPE glycoprotein gp130|Simian foamy virus (isolate chimpanzee)

Query: 2 AKWQHLH 8
+KW H+H
Sbjct: 425 SKWMHMH 431


>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1

Query: 2 AKWQHLH 8
+KWQ LH
Sbjct: 426 SKWQKLH 432




29|SequenceR|150|141|KQKTTKAKWQ

>sp|Y059_OSHVF|UNCHARACTERIZED protein ORF59|Ostreid herpesvirus 1 (isolate France)

Query: 2 QKTTKAKW 9
QKT K +W
Sbjct: 162 QKTIKGQW 169


>sp|YR818_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R818|Acanthamoeba polyphaga

Query: 3 KTTKAKWQ 10
KTTK +W+
Sbjct: 1481 KTTKPEWK 1488


>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 1 KQKTTKAKW 9
K KT+K KW
Sbjct: 266 KTKTSKFKW 274




30|SequenceR|155|146|VTGDHKQKTT

>sp|POLG_DWV|GENOME polyprotein|Deformed wing virus (DWV)

Query: 1 VTGDHKQ 7
VTGDH Q
Sbjct: 2263 VTGDHTQ 2269


>sp|RDRP_BOTVX|RNA replication protein|Botrytis virus X (isolate Botrytis

Query: 1 VTGDHKQKT 9
+TGDH+Q T
Sbjct: 735 LTGDHRQTT 743


>sp|VL2_MMPV1|MINOR capsid protein L2|Macaca mulata papillomavirus 1 (Rhpv

Query: 1 VTGDHKQKTT 10
+TGDH TT
Sbjct: 213 ITGDHNYNTT 222


>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)

Query: 3 GDHKQKTT 10
G H QKTT
Sbjct: 249 GAHAQKTT 256


>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3 GDHKQKTT 10
G H QKTT
Sbjct: 249 GAHAQKTT 256




31|SequenceR|160|151|YTLLGVTGDH

>sp|TUBZ_CBCP|TUBULIN-LIKE protein TubZ|Clostridium botulinum C phage (Clostridium

Query: 2 TLLGVTGDH 10
TLLG+ GD+
Sbjct: 20 TLLGICGDY 28


>sp|POLG_LMVE|GENOME polyprotein|Lettuce mosaic virus (strain E)

Query: 1 YTLLGVTGDH 10
+TLLGV G H
Sbjct: 3246 HTLLGVRGLH 3255


>sp|POLG_LMV0|GENOME polyprotein|Lettuce mosaic virus (strain 0

Query: 1 YTLLGVTGDH 10
+TLLGV G H
Sbjct: 3246 HTLLGVRGLH 3255


>sp|P9_RDVO|MINOR outer capsid protein P9|Rice dwarf virus (isolate O)

Query: 1 YTLLGVTGD 9
+TLLG GD
Sbjct: 83 FTLLGSVGD 91


>sp|P9_RDVF|MINOR outer capsid protein P9|Rice dwarf virus (isolate Fujian)

Query: 1 YTLLGVTGD 9
+TLLG GD
Sbjct: 83 FTLLGSVGD 91


>sp|P9_RDVA|MINOR outer capsid protein P9|Rice dwarf virus (isolate Akita)

Query: 1 YTLLGVTGD 9
+TLLG GD
Sbjct: 83 FTLLGSVGD 91


>sp|P9_RDV|MINOR outer capsid protein P9|Rice dwarf virus (RDV)

Query: 1 YTLLGVTGD 9
+TLLG GD
Sbjct: 83 FTLLGSVGD 91


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 1 YTLLGVT 7
YTLLG+T
Sbjct: 1259 YTLLGMT 1265


>sp|SPIKE_BC133|SPIKE glycoprotein|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 YTLLGVTG 8
Y+L GVTG
Sbjct: 611 YSLYGVTG 618


>sp|VSR_BNYVS|PROBABLE suppressor of RNA silencing|Beet necrotic yellow vein virus

Query: 1 YTLLGVTGD 9
+++LGV GD
Sbjct: 101 FSILGVCGD 109


>sp|SPIKE_BCHK4|SPIKE glycoprotein|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 YTLLGVTG 8
Y+L GVTG
Sbjct: 611 YSLYGVTG 618


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 3 LLGVTGDH 10
LLG+T DH
Sbjct: 686 LLGLTVDH 693


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 3 LLGVTGDH 10
LLG+T DH
Sbjct: 686 LLGLTVDH 693


>sp|Y043_OSHVF|UNCHARACTERIZED protein ORF43|Ostreid herpesvirus 1 (isolate France)

Query: 3 LLGVTGD 9
+LG+TGD
Sbjct: 167 VLGITGD 173




32|SequenceR|165|156|AQLVPYTLLG

>sp|V143_NPVOP|ATP-DEPENDENT DNA helicase P143|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 5 PYTLLG 10
PYTLLG
Sbjct: 446 PYTLLG 451


>sp|DPOL_ADES1|DNA polymerase|Snake adenovirus serotype 1 (SnAdV-1)

Query: 2 QLVPYTLL 9
QLVPY L+
Sbjct: 188 QLVPYLLV 195




33|SequenceR|170|161|LLIDAAQLVP

>sp|SIGM3_REOVL|OUTER capsid protein sigma-3|Reovirus type 1 (strain Lang)

Query: 1 LLIDAAQLVP 10
L+ID++ LVP
Sbjct: 172 LMIDSSDLVP 181


>sp|SIGM3_REOVJ|OUTER capsid protein sigma-3|Reovirus type 2 (strain D5/Jones)

Query: 1 LLIDAAQLVP 10
L+ID++ LVP
Sbjct: 172 LMIDSSDLVP 181


>sp|SIGM3_REOVD|OUTER capsid protein sigma-3|Reovirus type 3 (strain Dearing)

Query: 1 LLIDAAQLVP 10
L+ID++ L+P
Sbjct: 172 LMIDSSDLIP 181




34|SequenceR|175|166|HTSKYLLIDA

>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1 HTSKYLLIDA 10
HT K+++IDA
Sbjct: 1177 HTEKFVIIDA 1186


>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1 HTSKYLLIDA 10
HT K+++IDA
Sbjct: 1177 HTEKWVIIDA 1186


>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 1 HTSKYLLI 8
HT+ YLLI
Sbjct: 204 HTTSYLLI 211


>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 1 HTSKYLLI 8
HT+ YLLI
Sbjct: 204 HTTSYLLI 211


>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4

Query: 1 HTSKYLLI 8
HT+ YLLI
Sbjct: 204 HTTSYLLI 211


Query: 1 HTSKYLLIDA 10
HT K +++DA
Sbjct: 1191 HTEKCVVVDA 1200


>sp|NRAM_I84A4|NEURAMINIDASE A virus (strain A/Gull/Astrakhan/227/1984

Query: 1 HTSKYL 6
HTSKYL
Sbjct: 313 HTSKYL 318


>sp|NRAM_I80AD|NEURAMINIDASE A virus (strain A/Gull/Minnesota/945/1980

Query: 1 HTSKYL 6
HTSKYL
Sbjct: 314 HTSKYL 319


>sp|NRAM_I77AG|NEURAMINIDASE A virus (strain A/Budgerigar/Hokkaido/1/1977

Query: 1 HTSKYL 6
HTSKYL
Sbjct: 313 HTSKYL 318


>sp|NRAM_I77AF|NEURAMINIDASE A virus (strain A/Gull/Maryland/704/1977

Query: 1 HTSKYL 6
HTSKYL
Sbjct: 314 HTSKYL 319


>sp|NRAM_I76AK|NEURAMINIDASE A virus (strain A/Duck/New

Query: 1 HTSKYL 6
HTSKYL
Sbjct: 313 HTSKYL 318


>sp|NRAM_I56A2|NEURAMINIDASE A virus (strain A/Duck/England/1/1956

Query: 1 HTSKYL 6
HTSKYL
Sbjct: 313 HTSKYL 318


>sp|NRAM_I56A1|NEURAMINIDASE A virus (strain A/Duck/Czechoslovakia/1956

Query: 1 HTSKYL 6
HTSKYL
Sbjct: 313 HTSKYL 318


>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1 HTSKYLLIDA 10
HT K ++IDA
Sbjct: 1177 HTEKCVIIDA 1186


>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1 HTSKYLLIDA 10
HT K ++IDA
Sbjct: 1177 HTEKCVIIDA 1186


>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1 HTSKYLLIDA 10
HT K ++IDA
Sbjct: 1177 HTEKCVIIDA 1186


>sp|ENV_KORV|ENVELOPE glycoprotein|Koala retrovirus (KoRV)

Query: 1 HTSKYLL 7
HT KYLL
Sbjct: 398 HTHKYLL 404


>sp|VP54_CPSVP|UNCHARACTERIZED 54 kDa protein|Citrus psorosis virus (isolate Spain/P-121)

Query: 3 SKYLLIDA 10
S YL+IDA
Sbjct: 221 SSYLMIDA 228


>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I86A3|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/Tennessee/5/1986

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I85A7|POLYMERASE acidic protein|Influenza A virus (strain A/Ruddy

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I83A5|POLYMERASE acidic protein|Influenza A virus (strain

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I83A4|POLYMERASE acidic protein|Influenza A virus (strain A/Turkey/Ireland/1378/1983

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I80AD|POLYMERASE acidic protein|Influenza A virus (strain A/Gull/Minnesota/945/1980

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I80A8|POLYMERASE acidic protein|Influenza A virus (strain

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I80A6|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hokkaido/8/1980

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I79A7|POLYMERASE acidic protein|Influenza A virus (strain A/Grey

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I79A1|POLYMERASE acidic protein|Influenza A virus (strain A/Pintail/Alberta/119/1979

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I78AC|POLYMERASE acidic protein|Influenza A virus (strain

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I77AF|POLYMERASE acidic protein|Influenza A virus (strain A/Gull/Maryland/704/1977

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I68A3|POLYMERASE acidic protein|Influenza A virus (strain A/Turkey/Ontario/6118/1968

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I66A1|POLYMERASE acidic protein|Influenza A virus (strain A/Turkey/Wisconsin/1/1966

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I56A2|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/England/1/1956

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I56A1|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Czechoslovakia/1956

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I49A1|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Germany/1949

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I34A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fowl

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 273 SKFLLMDA 280


>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 276 SKFLLMDA 283


>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 273 SKFLLMDA 280


>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 257 SKFLLMDA 264


>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31

Query: 3 SKYLLIDA 10
SK+LL+DA
Sbjct: 280 SKFLLMDA 287


>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)

Query: 3 SKYLLIDA 10
SKY L+DA
Sbjct: 25 SKYALVDA 32




35|SequenceR|180|171|EGVPVHTSKY

>sp|DPOL_RHCM6|DNA polymerase catalytic subunit|Rhesus cytomegalovirus (strain 68-1)

Query: 2 GVPVHTSKY 10
GVP+H KY
Sbjct: 975 GVPIHADKY 983


>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)

Query: 2 GVPVHTSKY 10
GVP+H KY
Sbjct: 1181 GVPIHADKY 1189


>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)

Query: 2 GVPVHTSKY 10
GVP+H KY
Sbjct: 1181 GVPIHADKY 1189


>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United

Query: 2 GVPVHTSKY 10
GVP H +KY
Sbjct: 181 GVPRHNAKY 189


>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 2 GVPVHTSKY 10
GVP H +KY
Sbjct: 181 GVPRHNAKY 189


>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 2 GVPVHTSKY 10
GVP H +KY
Sbjct: 181 GVPRHNAKY 189


>sp|RDRP_ROTSP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/SA11-Patton/G3P[X]) (RV-A)

Query: 2 GVPVHTSKY 10
GVP H +KY
Sbjct: 181 GVPRHNAKY 189


>sp|RDRP_ROTSH|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Monkey/South

Query: 2 GVPVHTSKY 10
GVP H +KY
Sbjct: 181 GVPRHNAKY 189


>sp|RDRP_ROTS1|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/SA11-Both/G3P5B[2]) (RV-A)

Query: 2 GVPVHTSKY 10
GVP H +KY
Sbjct: 181 GVPRHNAKY 189


>sp|RDRP_ROTRF|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/France/RF/1975/G6P6[1])

Query: 2 GVPVHTSKY 10
GVP H +KY
Sbjct: 181 GVPRHNAKY 189


>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 2 GVPVHTSKY 10
GVP H +KY
Sbjct: 181 GVPRHNAKY 189


>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 2 GVPVHTSKY 10
GVP H +KY
Sbjct: 181 GVPRHNAKY 189


>sp|RDRP_ROTBN|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United

Query: 2 GVPVHTSKY 10
GVP H +KY
Sbjct: 181 GVPRHNAKY 189


>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 2 GVPVHTSKY 10
GVP H +KY
Sbjct: 181 GVPRHNAKY 189


>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate

Query: 2 GVPVHTSKY 10
GVP H +KY
Sbjct: 181 GVPRHNAKY 189


>sp|RDRP_ROTBU|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United

Query: 2 GVPVHTSKY 10
GVP H +KY
Sbjct: 181 GVPRHNAKY 189


>sp|RDRP_ROTTU|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Monkey/United

Query: 2 GVPVHTSKY 10
GVP H +KY
Sbjct: 181 GVPRHNAKY 189


>sp|RDRP_TAV|RNA-DIRECTED RNA polymerase 2a|Tomato aspermy virus (TAV)

Query: 2 GVPVHTSKY 10
G PVH SK+
Sbjct: 545 GCPVHISKW 553


>sp|RDRP_ROTW3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United

Query: 2 GVPVHTSKY 10
GVP H KY
Sbjct: 181 GVPRHNEKY 189


>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 2 GVPVHTSKY 10
GVP H KY
Sbjct: 181 GVPRHNEKY 189


>sp|RDRP_ROTPG|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Pig/United

Query: 2 GVPVHTSKY 10
GVP H KY
Sbjct: 181 GVPRHNEKY 189


>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 2 GVPVHTSKY 10
GVP H KY
Sbjct: 181 GVPRHNEKY 189


>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United

Query: 2 GVPVHTSKY 10
GVP H KY
Sbjct: 181 GVPRHNEKY 189


>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 2 GVPVHTSKY 10
GVP H KY
Sbjct: 181 GVPRHNEKY 189


>sp|RDRP_ROTPY|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Pig/Mexico/YM/1983/G11P9[7])

Query: 2 GVPVHTSKY 10
GVP H KY
Sbjct: 181 GVPRHNEKY 189


>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 2 GVPVHTSKY 10
GVP H KY
Sbjct: 181 GVPRHNEKY 189


>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 2 GVPVHTSKY 10
GVP H KY
Sbjct: 181 GVPRHNEKY 189


>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 2 GVPVHTSKY 10
GVP H KY
Sbjct: 181 GVPRHNEKY 189


>sp|DPOL_TUHV1|DNA polymerase catalytic subunit|Tupaiid herpesvirus 1 (strain 1)

Query: 3 VPVHTSKY 10
VP+H +KY
Sbjct: 1094 VPIHAAKY 1101


>sp|DPOL_TUHV2|DNA polymerase catalytic subunit|Tupaiid herpesvirus (strain 2) (TuHV-2)

Query: 3 VPVHTSKY 10
VP+H +KY
Sbjct: 1094 VPIHAAKY 1101


>sp|RDRP_CRSVL|RNA-DIRECTED RNA polymerase|Carnation ringspot virus (isolate Lommel)

Query: 1 EGVPVHTSK 9
+GVPVH ++
Sbjct: 661 DGVPVHMAQ 669


>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain

Query: 3 VPVHTSKY 10
+P+H KY
Sbjct: 957 IPIHAEKY 964


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 3 VPVHTSKY 10
VP +TSKY
Sbjct: 1951 VPTYTSKY 1958


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 3 VPVHTSKY 10
VP +TSKY
Sbjct: 1951 VPTYTSKY 1958


>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)

Query: 3 VPVHTSKY 10
+P+H KY
Sbjct: 957 IPIHAEKY 964


>sp|DPOL_RCMVM|DNA polymerase catalytic subunit|Rat cytomegalovirus (strain Maastricht)

Query: 3 VPVHTSKY 10
+P+H KY
Sbjct: 1036 IPIHAEKY 1043


>sp|RDRP_RCNMV|RNA-DIRECTED RNA polymerase|Red clover necrotic mosaic virus

Query: 1 EGVPVHTSK 9
+GVP+H ++
Sbjct: 662 DGVPIHMAQ 670


>sp|LH2_ADES1|PROTEIN LH2|Snake adenovirus serotype 1 (SnAdV-1)

Query: 3 VPVHTSKY 10
+ VHT+KY
Sbjct: 54 IKVHTTKY 61


>sp|UL21_EHV4|PROTEIN UL21 homolog|Equine herpesvirus 4 (strain 1942)

Query: 2 GVPVHTSK 9
GVPVH ++
Sbjct: 33 GVPVHVNR 40


>sp|YL167_MIMIV|UNCHARACTERIZED protein L167|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 GVPVHT 7
G+PVHT
Sbjct: 179 GIPVHT 184


>sp|RDRP_GRVMC|RNA-DIRECTED RNA polymerase|Groundnut rosette virus (strain MC1)

Query: 2 GVPVHTS 8
G+PVH S
Sbjct: 699 GIPVHNS 705


>sp|PB2S1_I18A0|PB2-S1 A virus (strain A/Brevig

Query: 1 EGVPVHTSK 9
E VP+H SK
Sbjct: 492 ERVPLHQSK 500


>sp|POL2_BRSV|RNA2 polyprotein|Beet ringspot virus (BRSV) (Tomato

Query: 3 VPVHTSKY 10
VPVHT Y
Sbjct: 612 VPVHTPLY 619


>sp|Y041_OSHVF|UNCHARACTERIZED protein ORF41|Ostreid herpesvirus 1 (isolate France)

Query: 2 GVPVHTSKY 10
G+P +T+KY
Sbjct: 232 GIPQNTNKY 240


>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 2 GVPVHTSKY 10
G+P H KY
Sbjct: 1199 GIPSHVGKY 1207




36|SequenceR|185|176|HQVQDEGVPV

>sp|L_DMSVA|RNA-DIRECTED RNA polymerase L|Drosophila melanogaster sigma virus (isolate

Query: 1 HQVQDEGVPV 10
QV D G+P+
Sbjct: 511 QQVNDSGIPI 520


>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong

Query: 1 HQVQDEGVP 9
+Q +DEG+P
Sbjct: 238 NQAEDEGLP 246


>sp|DPOL_BPT5|DNA polymerase|Escherichia phage T5 (Enterobacteria phage

Query: 1 HQVQDEGVPV 10
+V+D GVP+
Sbjct: 353 QRVEDRGVPI 362


>sp|BTRF1_EBVG|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4 QDEGVPV 10
QD G+PV
Sbjct: 95 QDNGIPV 101


>sp|BTRF1_EBVB9|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4 QDEGVPV 10
QD G+PV
Sbjct: 95 QDNGIPV 101


>sp|BTRF1_EBVA8|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4 QDEGVPV 10
QD G+PV
Sbjct: 95 QDNGIPV 101




37|SequenceR|190|181|QVLEMHQVQD

***** No hits found ******


38|SequenceR|195|186|GQALDQVLEM

>sp|MVP_BCMNN|P3N-PIPO polyprotein|Bean common mosaic necrosis virus

Query: 1 GQALDQVLEM 10
G+ LDQVLE+
Sbjct: 183 GKVLDQVLEI 192


>sp|POLG_BCMNN|GENOME polyprotein|Bean common mosaic necrosis virus

Query: 1 GQALDQVLEM 10
G+ LDQVLE+
Sbjct: 183 GKVLDQVLEI 192


>sp|Y356_SIRV1|UNCHARACTERIZED protein 356|Sulfolobus islandicus rod-shaped virus 1

Query: 1 GQALDQVLEM 10
G+A+D++LE+
Sbjct: 307 GKAIDKILEV 316


>sp|POL1_BRAV|RNA1 polyprotein|Blackcurrant reversion association virus (BRAV)

Query: 1 GQALDQV 7
GQA+DQ+
Sbjct: 558 GQAMDQI 564




39|SequenceR|200|191|YKKNFGQALD

>sp|Y113_OSHVF|UNCHARACTERIZED protein ORF113|Ostreid herpesvirus 1 (isolate France)

Query: 1 YKKNFGQALD 10
YKKN +A+D
Sbjct: 32 YKKNVKKAID 41


>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)

Query: 2 KKNFGQALD 10
+KNFG+A++
Sbjct: 142 RKNFGKAMN 150


>sp|MVP_LNYV3|PROBABLE movement protein 4b|Lettuce necrotic yellows virus (isolate

Query: 1 YKKNFGQAL 9
Y KNFG+ +
Sbjct: 95 YMKNFGKTI 103


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 YKKNFGQAL 9
Y+KNF +A+
Sbjct: 1586 YEKNFNRAI 1594


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 YKKNFGQAL 9
Y+KNF +A+
Sbjct: 1586 YEKNFNRAI 1594


>sp|GT300_AFV1Y|PUTATIVE glycosyltransferase ORF300|Acidianus filamentous virus 1 (isolate

Query: 1 YKKNFGQ 7
Y+KN+G+
Sbjct: 156 YRKNYGE 162




40|SequenceR|205|196|PFFEGYKKNF

>sp|NS3C_BC133|NON-STRUCTURAL protein 3c|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 PFFEGYKKN 9
PFF G KKN
Sbjct: 178 PFFTGVKKN 186


>sp|YR329_MIMIV|UNCHARACTERIZED protein R329|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 FFEGYKKN 9
+FEGYK N
Sbjct: 29 YFEGYKTN 36


>sp|NS1AB_MASV1|NON-STRUCTURAL polyprotein 1AB|Mink astrovirus 1 (MAstV-1)

Query: 1 PFFEGYKK 8
PFF G+K+
Sbjct: 1104 PFFNGFKR 1111


>sp|POL1_BBWV2|RNA1 polyprotein|Broad bean wilt virus 2

Query: 1 PFFEGYKKN 9
PF+ GYK++
Sbjct: 551 PFWSGYKRH 559


>sp|EXLYS_BPT7|PEPTIDOGLYCAN transglycosylase gp16|Escherichia phage T7 (Bacteriophage T7)

Query: 2 FFEGYKKN 9
F++GYK N
Sbjct: 1124 FYDGYKNN 1131


>sp|POLG_SVV1|GENOME polyprotein|Seneca Valley virus (isolate -/United

Query: 2 FFEGYKKNF 10
FF+GYK F
Sbjct: 1233 FFDGYKGQF 1241


>sp|POL1_BBWVS|RNA1 polyprotein|Broad bean wilt virus 1

Query: 1 PFFEGYKK 8
PF+ GYK+
Sbjct: 523 PFWSGYKR 530


>sp|ALT_BPT6|NAD(+)--ARGININE ADP-ribosyltransferase|Enterobacteria phage T6 (Bacteriophage T6)

Query: 2 FFEGYKKNF 10
FFE YK N+
Sbjct: 349 FFEEYKDNW 357


>sp|ALT_BPT2|NAD(+)--ARGININE ADP-ribosyltransferase|Enterobacteria phage T2 (Bacteriophage T2)

Query: 2 FFEGYKKNF 10
FFE YK N+
Sbjct: 349 FFEEYKDNW 357


>sp|VNS3_AHSV4|NON-STRUCTURAL protein NS3|African horse sickness virus 4

Query: 3 FEGYKKN 9
FE YKKN
Sbjct: 142 FEDYKKN 148


>sp|MVP_SBMVN|P3N-PIPO polyprotein|Soybean mosaic virus (strain N)

Query: 2 FFEGYKKNF 10
FF G+KK F
Sbjct: 316 FFRGWKKVF 324


>sp|MVP_SBMVG|P3N-PIPO polyprotein|Soybean mosaic virus (strain G2)

Query: 2 FFEGYKKNF 10
FF G+KK F
Sbjct: 316 FFRGWKKVF 324


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 2 FFEGYKKNF 10
FF+GY+ F
Sbjct: 1350 FFDGYENQF 1358


>sp|V216_FOWPN|PUTATIVE ankyrin repeat protein FPV216|Fowlpox virus (strain NVSL) (FPV)

Query: 2 FFEGYKKN 9
F EGY KN
Sbjct: 203 FSEGYNKN 210


>sp|059L_FRG3G|UNCHARACTERIZED protein 059L|Frog virus 3 (isolate Goorha)

Query: 1 PFFEGYKK 8
P EGYK+
Sbjct: 101 PMLEGYKR 108


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)

Query: 2 FFEGYKKNF 10
FF+GY+ F
Sbjct: 1349 FFDGYENQF 1357


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 2 FFEGYKKNF 10
FF+GY+ F
Sbjct: 1347 FFDGYENQF 1355


>sp|POLG_SBMVN|GENOME polyprotein|Soybean mosaic virus (strain N)

Query: 2 FFEGYKKNF 10
FF G+KK F
Sbjct: 316 FFRGWKKVF 324


>sp|POLG_SBMVG|GENOME polyprotein|Soybean mosaic virus (strain G2)

Query: 2 FFEGYKKNF 10
FF G+KK F
Sbjct: 316 FFRGWKKVF 324


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 2 FFEGYKKNF 10
FF+GY+ F
Sbjct: 1349 FFDGYENQF 1357


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 2 FFEGYKKNF 10
FF+GY+ F
Sbjct: 1349 FFDGYENQF 1357


>sp|POL1_BPMV|RNA1 polyprotein|Bean-pod mottle virus (strain Kentucky

Query: 1 PFFEGYKK 8
PF+ GY++
Sbjct: 511 PFWSGYRR 518


>sp|MVP_BTMV|P3N-PIPO polyprotein|Beet mosaic virus (BtMV)

Query: 2 FFEGYKKNF 10
FF G+K+ F
Sbjct: 320 FFAGWKEGF 328


>sp|PRIM_ELHVK|DNA primase|Elephantid herpesvirus 1 (isolate Asian

Query: 1 PFFEGY 6
P FEGY
Sbjct: 440 PLFEGY 445


>sp|POLG_BTMV|GENOME polyprotein|Beet mosaic virus (BtMV)

Query: 2 FFEGYKKNF 10
FF G+K+ F
Sbjct: 320 FFAGWKEGF 328


>sp|ORF4B_BCHK4|NON-STRUCTURAL protein ORF4b|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 PFFEGYKKN 9
PFF KKN
Sbjct: 178 PFFTDVKKN 186


>sp|RDRP_BBSCV|RNA replication polyprotein|Blueberry scorch virus (BBScV)

Query: 2 FFEGYKKNF 10
F EG++KN
Sbjct: 1462 FVEGFQKNL 1470


>sp|CVC2_HHV7J|CAPSID vertex component 2|Human herpesvirus 7 (strain JI)

Query: 1 PFFEGYKKN 9
P FEG+ +N
Sbjct: 14 PIFEGHVRN 22


>sp|CATV_NPVLD|VIRAL cathepsin|Lymantria dispar multicapsid nuclear polyhedrosis

Query: 2 FFEGYKKNF 10
F E Y KN+
Sbjct: 59 FVENYNKNY 67




41|SequenceR|210|201|ISEPVPFFEG

>sp|TRM1_BHV2B|TRIPARTITE terminase subunit 1|Bovine herpesvirus 2 (strain BMV)

Query: 2 SEPVPFFEG 10
S PV +FEG
Sbjct: 113 SSPVAYFEG 121


>sp|PG114_VACCC|CORE protein D2|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 ISEPVPFF 8
ISEP+P++
Sbjct: 125 ISEPIPYY 132


>sp|PG114_MONPV|CORE protein OPG114|Monkeypox virus (MPXV)

Query: 1 ISEPVPFF 8
ISEP+P++
Sbjct: 125 ISEPIPYY 132


>sp|PG114_VARV|CORE protein D2|Variola virus

Query: 1 ISEPVPFF 8
ISEP+P++
Sbjct: 125 ISEPIPYY 132


>sp|PG114_VAR67|CORE protein D2|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 ISEPVPFF 8
ISEP+P++
Sbjct: 125 ISEPIPYY 132


>sp|POLG_RHDVF|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 2 SEPVPFFEG 10
S P P FEG
Sbjct: 136 SFPTPIFEG 144


>sp|POLG_RHDV3|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 2 SEPVPFFEG 10
S P P FEG
Sbjct: 136 SFPTPIFEG 144


>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 SEPVPFFEG 10
+EP+P F G
Sbjct: 1179 TEPLPIFGG 1187


>sp|RDRP_NMV|RNA replication protein|Narcissus mosaic virus (NMV)

Query: 3 EPVPFFE 9
EPVPF E
Sbjct: 1249 EPVPFEE 1255


>sp|PG114_VACCW|CORE protein OPG114|Vaccinia virus (strain Western Reserve)

Query: 2 SEPVPFF 8
SEP+P++
Sbjct: 126 SEPIPYY 132


>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)

Query: 1 ISEPVPF 7
+ EPVPF
Sbjct: 633 LKEPVPF 639




42|SequenceR|215|206|KMSTLISEPV

>sp|GPX_MCV1|GLUTATHIONE peroxidase|Molluscum contagiosum virus subtype 1

Query: 2 MSTLISEP 9
MSTL+S+P
Sbjct: 155 MSTLVSDP 162




43|SequenceR|220|211|LSKVKKMSTL

>sp|YR413_MIMIV|UNCHARACTERIZED protein R413|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 LSKVKKMSTL 10
L K++KMST+
Sbjct: 23 LEKLEKMSTI 32




44|SequenceR|225|216|ASPDRLSKVK

>sp|POLG_BSTV1|GENOME polyprotein|Brome streak virus (strain 11-Cal)

Query: 1 ASPDRLSKVK 10
A+P+R+ KV+
Sbjct: 2879 ATPERIEKVR 2888


>sp|ORF23_TTVV4|PROBABLE protein VP2|Torque teno virus (isolate Human/Germany/KAV/2001)

Query: 2 SPDRLSKV 9
+PDRLSK
Sbjct: 123 APDRLSKT 130




45|SequenceR|230|221|SKSMKASPDR

>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7

Query: 2 KSMKASPDR 10
++MK +PDR
Sbjct: 293 RAMKENPDR 301




46|SequenceR|235|226|LKDPDSKSMK

>sp|PA_I86A3|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/Tennessee/5/1986

Query: 2 KDPDSKSMK 10
KDP +K+MK
Sbjct: 353 KDPKTKNMK 361


>sp|PB1F2_I56A1|PROTEIN PB1-F2|Influenza A virus (strain A/Duck/Czechoslovakia/1956

Query: 1 LKDPDSKSMK 10
LKDP +S+K
Sbjct: 64 LKDPTQESLK 73




47|SequenceR|240|231|IRVTALKDPD

***** No hits found ******


48|SequenceR|245|236|EPSDTIRVTA

>sp|DEPOL_BPKB1|DEPOLYMERASE, capsule K2-specific|Klebsiella phage B1 (Bacteriophage B1)

Query: 1 EPSDTIRVTA 10
E SDT+R+T
Sbjct: 329 ESSDTLRITG 338


>sp|DEPOL_BPKRA|DEPOLYMERASE, capsule K2-specific|Klebsiella phage RAD2 (Bacteriophage RAD2)

Query: 1 EPSDTIRVTA 10
E SDT+R+T
Sbjct: 329 ESSDTLRITG 338


>sp|VF602_ASFM2|PROTEIN B602L|African swine fever virus (isolate

Query: 2 PSDTIRV 8
P DTIRV
Sbjct: 587 PDDTIRV 593


>sp|PORTL_PSHV1|PORTAL protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 EPSDTIRVT 9
EP+D +RV
Sbjct: 129 EPADAVRVA 137


>sp|DPOL_NPVLD|DNA polymerase|Lymantria dispar multicapsid nuclear polyhedrosis

Query: 2 PSDTIRVT 9
P+DT R+T
Sbjct: 31 PADTARIT 38


>sp|POLN_EEVV|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (VEEV)

Query: 1 EPSDTI 6
EPSDTI
Sbjct: 56 EPSDTI 61


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 EPSDTI 6
EPSDTI
Sbjct: 56 EPSDTI 61




49|SequenceR|250|241|KQVIEEPSDT

>sp|VP26_HIS1I|STRUCTURAL protein 26|His1 virus (isolate Australia/Victoria) (His1V)

Query: 2 QVIEEPSDT 10
+V+E+PSD+
Sbjct: 166 KVLEQPSDS 174




50|SequenceR|255|246|VAKRFKQVIE

>sp|RPOB_NPVSL|PROBABLE DNA-directed RNA polymerase subunit|Spodoptera littoralis nuclear

Query: 1 VAKRFKQVIE 10
+AK+FK +IE
Sbjct: 405 IAKKFKDLIE 414


>sp|GH_SHV21|ENVELOPE glycoprotein H|Saimiriine herpesvirus 2 (strain 11)

Query: 1 VAKRFKQVIE 10
+AK F+++IE
Sbjct: 256 IAKVFREIIE 265


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 3 KRFKQVIE 10
K FKQ++E
Sbjct: 497 KAFKQIVE 504


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3 KRFKQVIE 10
K FKQ++E
Sbjct: 497 KAFKQIVE 504




51|SequenceR|260|251|STFDTVAKRF

>sp|RDRP_BTV10|RNA-DIRECTED RNA polymerase|Bluetongue virus 10 (isolate USA)

Query: 1 STFDTVAK 8
S FDTVAK
Sbjct: 786 SIFDTVAK 793


>sp|YR535_MIMIV|UNCHARACTERIZED protein R535|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 TFDTVAKRF 10
TFDT+++ F
Sbjct: 66 TFDTISQYF 74


>sp|VP7_ROTPK|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Pig/Russia/K/1987)

Query: 1 STFDTVAKR 9
+TF+TVA R
Sbjct: 213 TTFETVADR 221




52|SequenceR|265|256|DYTVESTFDT

>sp|POLG_TEV|GENOME polyprotein|Tobacco etch virus (TEV)

Query: 1 DYTVESTFDT 10
+Y+++S FDT
Sbjct: 1735 NYSIQSIFDT 1744


>sp|L_PIRVV|RNA-DIRECTED RNA polymerase L|Pirital mammarenavirus (isolate

Query: 1 DYTVESTFDT 10
DY VE FDT
Sbjct: 423 DYLVEIDFDT 432


>sp|ETF2_FOWPN|EARLY transcription factor 82 kDa|Fowlpox virus (strain NVSL) (FPV)

Query: 1 DYTVESTFD 9
D+TVES F+
Sbjct: 171 DFTVESKFN 179




53|SequenceR|270|261|ARGAPDYTVE

>sp|Y073_NPVAC|UNCHARACTERIZED 11.5 kDa protein in|Autographa californica nuclear polyhedrosis

Query: 5 PDYTVE 10
PDYT+E
Sbjct: 34 PDYTIE 39


>sp|D2_RFVKA|CORE protein D4|Rabbit fibroma virus (strain Kasza)

Query: 4 APDYTV 9
APDYTV
Sbjct: 90 APDYTV 95


>sp|VF546_MIMIV|UNCHARACTERIZED protein R546|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 RGAPDYTVE 10
RG P+Y V+
Sbjct: 17 RGTPEYCVQ 25


>sp|PA_THOGV|POLYMERASE acidic protein|Thogoto virus (isolate SiAr 126)

Query: 2 RGAPDYTV 9
RGAP Y V
Sbjct: 52 RGAPQYDV 59


>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)

Query: 1 ARGAPDYT 8
ARG P YT
Sbjct: 523 ARGVPTYT 530


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 ARGAPDYT 8
A+GAP YT
Sbjct: 522 AKGAPTYT 529


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 2 RGAPDYT 8
RGAP YT
Sbjct: 523 RGAPTYT 529


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 ARGAPDYT 8
ARG P YT
Sbjct: 522 ARGVPTYT 529


>sp|CVC1_EHV1B|CAPSID vertex component 1|Equine herpesvirus 1 (strain Ab4p)

Query: 1 ARGAPDYT 8
ARGAPD +
Sbjct: 634 ARGAPDSS 641


>sp|DUT_HHV11|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 1 (strain 17)

Query: 2 RGAPDYTVE 10
RG PD T E
Sbjct: 331 RGVPDSTAE 339


>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)

Query: 1 ARGAPD 6
ARGAPD
Sbjct: 655 ARGAPD 660




54|SequenceR|275|266|INSVGARGAP

>sp|NS1_PAVL3|INITIATOR protein NS1|Parvovirus LuIII

Query: 1 INSVGARGAP 10
INSVG+ +P
Sbjct: 573 INSVGSTNSP 582




55|SequenceR|280|271|AHVAVINSVG

>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 2 HVAVINSVG 10
H++V+N+VG
Sbjct: 1415 HLSVLNAVG 1423


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 2 HVAVINSVG 10
H++V+N+VG
Sbjct: 1404 HLSVLNAVG 1412


>sp|R1A_CVPPU|REPLICASE polyprotein 1a|Porcine transmissible gastroenteritis coronavirus

Query: 2 HVAVINSVG 10
H++V+N+VG
Sbjct: 1404 HLSVLNAVG 1412


>sp|TOP2_ASFP4|DNA topoisomerase 2|African swine fever virus (isolate

Query: 2 HVAVINSV 9
HV+VIN V
Sbjct: 300 HVSVINGV 307




56|SequenceR|285|276|LGTVAAHVAV

***** No hits found ******


57|SequenceR|290|281|VEEVSLGTVA

***** No hits found ******


58|SequenceR|295|286|ASRRVVEEVS

>sp|POL_SIVGB|GAG-POL polyprotein|Simian immunodeficiency virus (isolate GB1)

Query: 2 SRRVVEEVS 10
SRR +EEVS
Sbjct: 499 SRRPIEEVS 507


>sp|NSP5_ROTGI|NON-STRUCTURAL protein 5|Rotavirus B (isolate RVB/Rat/United

Query: 1 ASRRVVEEV 9
ASRRV EEV
Sbjct: 20 ASRRVKEEV 28


>sp|RDRP_RDVA|RNA-DIRECTED RNA polymerase P1|Rice dwarf virus (isolate Akita)

Query: 2 SRRVVEEVS 10
+RR+ EEVS
Sbjct: 825 TRRIAEEVS 833


>sp|VF414_IIV6|PUTATIVE hydrolase 414L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 ASRRVVEE 8
ASR VVEE
Sbjct: 95 ASREVVEE 102


>sp|RDRP_RDVF|RNA-DIRECTED RNA polymerase P1|Rice dwarf virus (isolate Fujian)

Query: 2 SRRVVEEVS 10
+RR+ EEVS
Sbjct: 825 TRRIAEEVS 833


>sp|P1_TYYVF|PROTEIN P1|Turnip yellows virus (isolate FL-1)

Query: 3 RRVVEEVS 10
R+V+EE+S
Sbjct: 508 RKVIEEIS 515


>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 3 RRVVEEVS 10
R+V+EE+S
Sbjct: 1395 RKVIEEIS 1402


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 3 RRVVEEVS 10
R+V+EE+S
Sbjct: 1395 RKVIEEIS 1402


>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 3 RRVVEEVS 10
R+V+EE+S
Sbjct: 1404 RKVIEEIS 1411




59|SequenceR|300|291|ATNMGASRRV

>sp|VP2_AHSV|OUTER capsid protein VP2|African horse sickness virus (AHSV)

Query: 2 TNMGASRR 9
TN G SRR
Sbjct: 717 TNFGVSRR 724


>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate

Query: 3 NMGASRRV 10
NMG +RRV
Sbjct: 2271 NMGRARRV 2278


>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United

Query: 3 NMGASRRV 10
NMG +RRV
Sbjct: 2271 NMGRARRV 2278




60|SequenceR|305|296|ALKYRATNMG

>sp|VE2_HPV54|REGULATORY protein E2|Human papillomavirus type 54

Query: 1 ALKYRATNMG 10
AL+Y+A MG
Sbjct: 41 ALQYKAREMG 50




61|SequenceR|310|301|VADAVALKYR

***** No hits found ******


62|SequenceR|315|306|AFKEIVADAV

>sp|IKBI1_MDBVW|I-KAPPA-B like protein I1|Microplitis demolitor bracovirus (isolate Webb)

Query: 1 AFKEIVADA 9
AFK +++DA
Sbjct: 35 AFKNVISDA 43


>sp|IKBF2_MDBVW|I-KAPPA-B like protein F2|Microplitis demolitor bracovirus (isolate Webb)

Query: 1 AFKEIVADA 9
AFK +++DA
Sbjct: 35 AFKNVISDA 43




63|SequenceR|320|311|ERKIPAFKEI

>sp|VG34_ICHVA|UNCHARACTERIZED protein ORF34|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 RKIPAFKEI 10
RKI +FKE+
Sbjct: 364 RKIKSFKEL 372




64|SequenceR|325|316|KLKEIERKIP

>sp|UNG_HHV6Z|URACIL-DNA glycosylase|Human herpesvirus 6B (strain Z29)

Query: 2 LKEIERKIP 10
KE+ER IP
Sbjct: 121 FKELERSIP 129


>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D

Query: 1 KLKEIERKIP 10
KLKE RK+P
Sbjct: 603 KLKECFRKLP 612


>sp|TOP2_ASFK5|DNA topoisomerase 2|African swine fever virus (isolate

Query: 1 KLKEIERKIP 10
KL IER+IP
Sbjct: 699 KLDAIERQIP 708


>sp|TOP2_ASFM2|DNA topoisomerase 2|African swine fever virus (isolate

Query: 1 KLKEIERKIP 10
KL IER+IP
Sbjct: 698 KLDAIERQIP 707


>sp|TOP2_ASFWA|DNA topoisomerase 2|African swine fever virus (isolate

Query: 1 KLKEIERKIP 10
KL IER+IP
Sbjct: 699 KLDAIERQIP 708


>sp|TOP2_ASFP4|DNA topoisomerase 2|African swine fever virus (isolate

Query: 1 KLKEIERKIP 10
KL IER+IP
Sbjct: 699 KLDAIERQIP 708


>sp|TOP2_ASFB7|DNA topoisomerase 2|African swine fever virus (strain

Query: 1 KLKEIERKIP 10
KL IER+IP
Sbjct: 699 KLDAIERQIP 708


>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D

Query: 1 KLKEIERKIP 10
K+KE RK+P
Sbjct: 603 KIKECFRKVP 612


>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 2 LKEIERKI 9
LKE+ER+I
Sbjct: 554 LKELERRI 561


>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2

Query: 1 KLKEIERKIP 10
K+KE RK+P
Sbjct: 614 KIKECFRKLP 623


>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2

Query: 1 KLKEIERKIP 10
K+KE RK+P
Sbjct: 614 KIKECFRKLP 623


>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D

Query: 1 KLKEIERKIP 10
K+KE RK+P
Sbjct: 603 KIKECFRKLP 612


>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D

Query: 1 KLKEIERKIP 10
K+KE RK+P
Sbjct: 603 KIKECFRKLP 612


>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D

Query: 1 KLKEIERKIP 10
K+KE RK+P
Sbjct: 603 KIKECFRKLP 612


>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D

Query: 1 KLKEIERKIP 10
K+KE RK+P
Sbjct: 603 KIKECFRKLP 612


>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D

Query: 1 KLKEIERKIP 10
K+KE RK+P
Sbjct: 603 KIKECFRKLP 612


>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C

Query: 1 KLKEIERKIP 10
K+KE RK+P
Sbjct: 614 KIKECFRKLP 623


>sp|RDRP_NCBVS|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Nudaurelia capensis beta virus (isolate

Query: 2 LKEIERKIP 10
L+E++R+IP
Sbjct: 487 LRELQREIP 495


>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C

Query: 1 KLKEIERKIP 10
KLK+ RK+P
Sbjct: 614 KLKQCFRKLP 623


>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C

Query: 1 KLKEIERKIP 10
KLK+ RK+P
Sbjct: 609 KLKQCFRKLP 618


>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C

Query: 1 KLKEIERKIP 10
KLK+ RK+P
Sbjct: 614 KLKQCFRKLP 623


>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)

Query: 2 LKEIERKI 9
LKEI+R+I
Sbjct: 196 LKEIDRRI 203


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2 LKEIERKIP 10
+++IER+IP
Sbjct: 1806 IEDIEREIP 1814


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2 LKEIERKIP 10
+++IER+IP
Sbjct: 1806 IEDIEREIP 1814


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2 LKEIERKIP 10
+++IER+IP
Sbjct: 1806 IEDIEREIP 1814


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2 LKEIERKIP 10
+++IER+IP
Sbjct: 1806 IEDIEREIP 1814


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2 LKEIERKIP 10
+++IER+IP
Sbjct: 1806 IEDIEREIP 1814


>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1

Query: 1 KLKEIERKIP 10
KLK+ RK+P
Sbjct: 614 KLKDCFRKLP 623




65|SequenceR|330|321|HDKDLKLKEI

>sp|R1A_WBV24|REPLICASE polyprotein 1a|White bream virus (isolate Blicca

Query: 1 HDKDLKLKE 9
HDK+LKL +
Sbjct: 1690 HDKELKLTQ 1698


>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 1 HDKDLKLKE 9
HDK+LKL +
Sbjct: 1690 HDKELKLTQ 1698


>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain

Query: 3 KDLKLKEI 10
KDL+LKE+
Sbjct: 616 KDLRLKEM 623


>sp|P32K_ADEO7|STRUCTURAL protein p32K|Ovine adenovirus D serotype 7

Query: 1 HDKDLKLKE 9
HD D+K+K+
Sbjct: 123 HDTDVKVKK 131


>sp|NS7B_CVCAI|NON-STRUCTURAL protein 7b|Canine coronavirus (strain Insavc-1) (CCoV)

Query: 1 HDKDLKL 7
HDKD+KL
Sbjct: 150 HDKDMKL 156


>sp|NS7B_CVCBG|NON-STRUCTURAL protein 7b|Canine coronavirus (strain BGF10) (CCoV)

Query: 1 HDKDLKL 7
HDKD+KL
Sbjct: 150 HDKDMKL 156


>sp|BXC_CBCP|BOTULINUM neurotoxin type C|Clostridium botulinum C phage (Clostridium

Query: 2 DKDLKLKEI 10
DKD LKEI
Sbjct: 82 DKDTFLKEI 90


>sp|209R_IIV6|UNCHARACTERIZED protein 209R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 HDKDLKLKE 9
H++D+K+ E
Sbjct: 251 HNRDIKINE 259




66|SequenceR|335|326|LVKELHDKDL

>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 1 LVKELHDKD 9
LV+E+H+KD
Sbjct: 3011 LVEEIHNKD 3019


>sp|GK_EHV1K|ENVELOPE glycoprotein K|Equine herpesvirus 1 (strain Kentucky

Query: 2 VKELHDK 8
+KELHDK
Sbjct: 99 MKELHDK 105


>sp|GK_EHV1B|ENVELOPE glycoprotein K|Equine herpesvirus 1 (strain Ab4p)

Query: 2 VKELHDK 8
+KELHDK
Sbjct: 99 MKELHDK 105


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 4 ELHDKD 9
ELHD+D
Sbjct: 658 ELHDRD 663


>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)

Query: 1 LVKELHDKD 9
L+K+L DKD
Sbjct: 527 LIKDLRDKD 535


>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant

Query: 1 LVKELHDKD 9
L+K+L DKD
Sbjct: 527 LIKDLRDKD 535


>sp|RDRP_GVAIS|RNA replication protein|Grapevine virus A (isolate Is

Query: 3 KELHDKDL 10
KELHD D+
Sbjct: 700 KELHDGDV 707




67|SequenceR|340|331|ASGIQLVKEL

>sp|PP220_ASFWA|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 3 GIQLVKEL 10
GI+LVKE+
Sbjct: 412 GIKLVKEI 419


>sp|PP220_ASFP4|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 3 GIQLVKEL 10
GI+LVKE+
Sbjct: 412 GIKLVKEI 419


>sp|PP220_ASFM2|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 3 GIQLVKEL 10
GI+LVKE+
Sbjct: 412 GIKLVKEI 419


>sp|PP220_ASFB7|POLYPROTEIN pp220|African swine fever virus (strain

Query: 3 GIQLVKEL 10
GI+LVKE+
Sbjct: 412 GIKLVKEI 419




68|SequenceR|345|336|LEKAKASGIQ

***** No hits found ******


69|SequenceR|350|341|CVTYALEKAK

>sp|YR837_MIMIV|PUTATIVE ankyrin repeat protein R837|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 CVTYALEKA 9
C+ YAL++A
Sbjct: 480 CINYALDRA 488


>sp|YL226_MIMIV|UNCHARACTERIZED protein L226|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 CVTYALEKA 9
C++YAL+K+
Sbjct: 434 CMSYALDKS 442


>sp|POL_JSRV|GAG-PRO-POL polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 1 CVTYALEK 8
CV YALE+
Sbjct: 1255 CVPYALEQ 1262


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 1 CVTYALEKA 9
C+ ALEKA
Sbjct: 934 CIQSALEKA 942


>sp|CAPSD_CRV|CAPSID protein|Cymbidium ringspot virus (CymRSV)

Query: 2 VTYALEKAK 10
V YA+EK K
Sbjct: 40 VNYAIEKGK 48


>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 1 CVTYALEKA 9
C+ ALEKA
Sbjct: 934 CIQAALEKA 942


>sp|OBP_PSHV1|REPLICATION origin-binding protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 VTYALEKA 9
+TYA+E+A
Sbjct: 548 ITYAIEEA 555




70|SequenceR|360|346|LFGVLKKVEQCVTYA

>sp|VP39_NPVOP|MAJOR capsid protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 LFGVLKKVEQCVTY 14
+FG ++ + CVTY
Sbjct: 18 IFGAIEPFDSCVTY 31


>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)

Query: 2 FGVLKKV-EQCVTY 14
F +LK V QC+TY
Sbjct: 623 FQILKDVVSQCITY 636


>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12

Query: 5 LKKVEQCVTY 14
L+K+E+C+ Y
Sbjct: 340 LRKIEECLHY 349


>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 3 GVLKKVEQCV 12
G+L+K+E+C+
Sbjct: 669 GLLEKIEECL 678


>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)

Query: 3 GVLKKVEQCV 12
G+L+K+E+C+
Sbjct: 669 GLLEKIEECL 678


>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann

Query: 3 GVLKKVEQCV 12
G+L+K+E+C+
Sbjct: 669 GLLEKIEECL 678


>sp|RDRP_OCSVU|RNA-DIRECTED RNA polymerase|Oat chlorotic stunt virus (isolate

Query: 5 LKKVEQCVTYA 15
LK V+Q VTY+
Sbjct: 619 LKHVDQFVTYS 629


>sp|062L_IIV6|UNCHARACTERIZED protein 062L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 LFGVLKKVEQCV 12
FG+LKK+ C+
Sbjct: 8 FFGILKKLLICI 19


>sp|PORTL_BPT7|PORTAL protein|Escherichia phage T7 (Bacteriophage T7)

Query: 5 LKKVEQCVT 13
L K+E+CVT
Sbjct: 439 LDKLERCVT 447


>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate

Query: 4 VLKKVEQCVTY 14
+LKKVE C +
Sbjct: 402 LLKKVESCCNW 412


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 1 LFGVLKKVE 9
LFG+LKK++
Sbjct: 3673 LFGMLKKLD 3681


>sp|YR467_MIMIV|UNCHARACTERIZED protein R467|Acanthamoeba polyphaga mimivirus (APMV)

Query: 6 KKVEQCVTYA 15
K +EQCV A
Sbjct: 104 KDIEQCVRMA 113


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 1 LFGVLKKVE 9
LFG+LKK++
Sbjct: 3648 LFGMLKKLD 3656


>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)

Query: 1 LFGVLKKVEQCVTY 14
L G+L+ V CV +
Sbjct: 820 LAGILRVVRTCVPF 833


>sp|NPH2_FOWPN|RNA helicase NPH-II|Fowlpox virus (strain NVSL) (FPV)

Query: 5 LKKVEQCVTY 14
L V QC++Y
Sbjct: 406 LASVSQCISY 415


>sp|R1A_CVPPU|REPLICASE polyprotein 1a|Porcine transmissible gastroenteritis coronavirus

Query: 1 LFGVLKKVE 9
LFG+LKK++
Sbjct: 3648 LFGMLKKLD 3656


>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 LFGVLKKVEQCV 12
LFG++KK++ V
Sbjct: 4111 LFGMIKKLDNDV 4122


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 LFGVLKKVEQCV 12
LFG++KK++ V
Sbjct: 4064 LFGMIKKLDNDV 4075


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1 LFGVLKKVEQCV 12
LFG++KK++ V
Sbjct: 4020 LFGMIKKLDNDV 4031


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 LFGVLKKVEQCV 12
LFG++KK++ V
Sbjct: 4071 LFGMIKKLDNDV 4082


>sp|PG067_VACCW|PROTEIN OPG067|Vaccinia virus (strain Western Reserve)

Query: 4 VLKKVEQCVT 13
+ + VEQCVT
Sbjct: 239 IKQMVEQCVT 248


>sp|PG067_VACCD|PROTEIN OPG067|Vaccinia virus (strain Dairen I)

Query: 8 VEQCVT 13
VEQCVT
Sbjct: 243 VEQCVT 248


>sp|PG067_VACCC|PROTEIN OPG067|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4 VLKKVEQCVT 13
+ + VEQCVT
Sbjct: 239 IKQMVEQCVT 248


>sp|POL_SRV2|GAG-PRO-POL polyprotein|Simian retrovirus SRV-2

Query: 4 VLKKVEQCVTY 14
++K+ CVTY
Sbjct: 1526 IVKQCPTCVTY 1536


>sp|DPOL_TUHV2|DNA polymerase catalytic subunit|Tupaiid herpesvirus (strain 2)

Query: 4 VLKKVEQCV 12
VLKK+ QC+
Sbjct: 228 VLKKMGQCL 236


>sp|DPOL_TUHV1|DNA polymerase catalytic subunit|Tupaiid herpesvirus 1 (strain 1)

Query: 4 VLKKVEQCV 12
VLKK+ QC+
Sbjct: 228 VLKKMGQCL 236


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 3 GVLKKVEQCV 12
G L VE+CV
Sbjct: 1447 GYLPSVEECV 1456


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 3 GVLKKVEQCV 12
G L VE+CV
Sbjct: 1447 GYLPSVEECV 1456




71|SequenceR|360|351|LFGVLKKVEQ

>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 1 LFGVLKKVE 9
LFG+LKK++
Sbjct: 3673 LFGMLKKLD 3681


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 1 LFGVLKKVE 9
LFG+LKK++
Sbjct: 3648 LFGMLKKLD 3656


>sp|R1A_CVPPU|REPLICASE polyprotein 1a|Porcine transmissible gastroenteritis coronavirus

Query: 1 LFGVLKKVE 9
LFG+LKK++
Sbjct: 3648 LFGMLKKLD 3656


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1 LFGVLKKVE 9
LFG++KK++
Sbjct: 4020 LFGMIKKLD 4028


>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 LFGVLKKVE 9
LFG++KK++
Sbjct: 4111 LFGMIKKLD 4119


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 LFGVLKKVE 9
LFG++KK++
Sbjct: 4064 LFGMIKKLD 4072


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 LFGVLKKVE 9
LFG++KK++
Sbjct: 4071 LFGMIKKLD 4079


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1 LFGVLKKVE 9
LFG++KK++
Sbjct: 4020 LFGMIKKLD 4028


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 LFGVLKKVE 9
LFG++KK++
Sbjct: 4111 LFGMIKKLD 4119


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 LFGVLKKVE 9
LFG++KK++
Sbjct: 4064 LFGMIKKLD 4072


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 LFGVLKKVE 9
LFG++KK++
Sbjct: 4071 LFGMIKKLD 4079




THE END