SYWM_HUMAN Blast Output
Archaea
1|Sequence|1|10|MALHSMRKAR

>sp|Y2347_METMJ|PUTATIVE HTH-type transcriptional regulatory protein|Methanoculleus

Query: 1 MALHSMRKA 9
M +H+MR+A
Sbjct: 216 MEIHAMRQA 224




2|Sequence|6|15|MRKARERWSF

>sp|RS172_METAC|SMALL ribosomal subunit protein uS17B|Methanosarcina acetivorans

Query: 1 MRKARERWSF 10
M++ RE+WS+
Sbjct: 49 MKRYREKWSY 58


>sp|Y22A_METJA|UNCHARACTERIZED protein MJ0226.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RKARERWSF 10
RKA+E W +
Sbjct: 41 RKAKEEWHY 49


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 1 MRKARERWS 9
+RK RE+W+
Sbjct: 507 IRKLREKWN 515


>sp|KAD6_PYRAE|PUTATIVE adenylate kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 KARERW 8
KARERW
Sbjct: 131 KARERW 136


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 4 ARERWSF 10
AR+RW F
Sbjct: 204 ARDRWGF 210


>sp|WTPC_THEKO|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Thermococcus kodakarensis (strain

Query: 2 RKARERWS 9
RKA+ RWS
Sbjct: 307 RKAKGRWS 314


>sp|Y700_METJA|UNCHARACTERIZED MscS family protein MJ0700|Methanocaldococcus jannaschii (strain

Query: 1 MRKARERWS 9
MR+ E+WS
Sbjct: 237 MRELYEKWS 245


>sp|HEM2_ARCFU|DELTA-AMINOLEVULINIC acid dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MRKARERWSF 10
+RKA RW F
Sbjct: 12 LRKANLRWMF 21


>sp|SYP_METS5|PROLINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 MRKARERWS 9
M+ +RE+WS
Sbjct: 1 MKISREKWS 9


>sp|DPOL_ARCFU|DNA polymerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MRKARERWS 9
+RK ERW+
Sbjct: 236 LRKRAERWN 244


>sp|SYH_METPE|HISTIDINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 MRKARERWSF 10
MR+A RW +
Sbjct: 26 MREAVRRWGY 35


>sp|RS12_CENSY|SMALL ribosomal subunit protein uS12|Cenarchaeum symbiosum (strain A)

Query: 2 RKARERWSF 10
+K R+RWS
Sbjct: 17 KKKRQRWSI 25


>sp|TMCA_THEKO|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus kodakarensis (strain

Query: 1 MRKARERWSF 10
++KARE+ SF
Sbjct: 421 LKKAREKRSF 430


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 MRKARERWS 9
M+ RE+WS
Sbjct: 1 MQITREKWS 9


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 MRKARERWS 9
M+ RE+WS
Sbjct: 1 MQITREKWS 9


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 MRKARERWS 9
M+ RE+WS
Sbjct: 1 MQITREKWS 9


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 MRKARERWS 9
M+ RE+WS
Sbjct: 1 MQITREKWS 9




3|Sequence|11|20|ERWSFIRALH

>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 2 RWSFIRA 8
RW+F+RA
Sbjct: 1227 RWAFLRA 1233


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 2 RWSFIRA 8
RWSF+ A
Sbjct: 867 RWSFLEA 873


>sp|LIPB_PYRAE|PROBABLE octanoyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ERWSFIRALH 10
E W +++LH
Sbjct: 13 EAWRLMKSLH 22


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 ERWSFIRAL 9
E WSF+ ++
Sbjct: 273 EEWSFLSSI 281




4|Sequence|16|25|IRALHKGSAA

>sp|HEM1_METB6|GLUTAMYL-TRNA reductase|Methanoregula boonei (strain DSM 21154

Query: 1 IRALHKGSAA 10
+RAL +GSAA
Sbjct: 408 VRALTRGSAA 417


>sp|OFOB2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 4 LHKGSA 9
LHKGSA
Sbjct: 184 LHKGSA 189


>sp|RNH2_PYRAE|RIBONUCLEASE HII|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 ALHKGSA 9
ALHKG A
Sbjct: 124 ALHKGEA 130




5|Sequence|21|30|KGSAAAPALQ

>sp|Y1418_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 GSAAAPALQ 10
G+AA PAL+
Sbjct: 12 GTAAIPALK 20




6|Sequence|26|35|APALQKDSKK

>sp|KDGA_SULAC|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 APALQKDSKK 10
PAL KD K+
Sbjct: 46 GPALSKDEKR 55


>sp|AATA_THESM|A-TYPE ATP synthase subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 1 APALQKDSK 9
APAL +D K
Sbjct: 106 APALSRDKK 114


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 1 APALQKDSK 9
APAL +D K
Sbjct: 109 APALPRDKK 117


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 APALQKDSK 9
APAL +D K
Sbjct: 109 APALPRDKK 117


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 APALQKDSK 9
APAL +D K
Sbjct: 109 APALPRDKK 117


>sp|AATA_THEGJ|A-TYPE ATP synthase subunit A|Thermococcus gammatolerans (strain DSM 15229

Query: 1 APALQKDSK 9
APAL +D K
Sbjct: 106 APALPRDKK 114


>sp|Y1626_METJA|UNCHARACTERIZED protein MJ1626|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ALQKDSKK 10
+L+KDSKK
Sbjct: 355 SLKKDSKK 362


>sp|AATA_THEON|A-TYPE ATP synthase subunit A|Thermococcus onnurineus (strain NA1)

Query: 1 APALQKDSK 9
APAL +D K
Sbjct: 106 APALPRDKK 114


>sp|AATA_DESSY|A-TYPE ATP synthase subunit A|Desulfurococcus sp. (strain SY)

Query: 1 APALQKDSK 9
APAL +D K
Sbjct: 106 APALPRDKK 114




7|Sequence|31|40|KDSKKRVFSG

>sp|RFCS_METS3|REPLICATION factor C small subunit|Methanobrevibacter smithii (strain ATCC

Query: 1 KDSKKRVFSG 10
+D KRVF G
Sbjct: 267 QDVSKRVFEG 276


>sp|CYAS_METAC|CYSTEATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KDSKKRV 7
KD+KKR+
Sbjct: 290 KDAKKRI 296




8|Sequence|36|45|RVFSGIQPTG

>sp|SYH_METKA|HISTIDINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 RVFSGIQPTG 10
R+F GI P+G
Sbjct: 150 RIFDGILPSG 159


>sp|SYY_METMJ|TYROSINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 RVFSGIQPTG 10
RV++G +P+G
Sbjct: 30 RVYTGYEPSG 39


>sp|SYY_METLZ|TYROSINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 RVFSGIQPTG 10
RV++G +P+G
Sbjct: 30 RVYTGYEPSG 39


>sp|SYK_THEAC|LYSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RVFSGIQPTG 10
RV +GI P+G
Sbjct: 19 RVSTGISPSG 28


>sp|SYY_HALSA|TYROSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 RVFSGIQPTG 10
RV+ G +P+G
Sbjct: 31 RVYVGYEPSG 40


>sp|SYY_HALS3|TYROSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 RVFSGIQPTG 10
RV+ G +P+G
Sbjct: 31 RVYVGYEPSG 40


>sp|SYK_ARCFU|LYSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RVFSGIQPTG 10
R+ +GI P+G
Sbjct: 19 RIATGISPSG 28


>sp|SYK_PICTO|LYSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 RVFSGIQPTG 10
R+ +GI P+G
Sbjct: 16 RISTGISPSG 25


>sp|SYK_THEVO|LYSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RVFSGIQPTG 10
R+ +GI P+G
Sbjct: 16 RISTGISPSG 25


>sp|Y987_METTH|UNCHARACTERIZED protein MTH_987|Methanothermobacter thermautotrophicus (strain

Query: 2 VFSGIQPTG 10
VFS I+PT
Sbjct: 40 VFSAIRPTA 48


>sp|RNP4_METPE|RIBONUCLEASE P protein component 4|Methanosphaerula palustris (strain ATCC

Query: 1 RVFSGIQP 8
+VF+GI P
Sbjct: 26 KVFAGINP 33


>sp|SYFB_METTH|PHENYLALANINE--TRNA ligase beta subunit|Methanothermobacter thermautotrophicus (strain

Query: 2 VFSGIQPTG 10
++SG++P G
Sbjct: 149 LYSGVEPEG 157


>sp|PSA_AERPE|PROTEASOME subunit alpha|Aeropyrum pernix (strain ATCC 700893

Query: 2 VFSGIQPTG 10
+F+G+ P G
Sbjct: 141 IFAGVNPDG 149


>sp|PYRK_METAC|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanosarcina acetivorans

Query: 2 VFSGIQPTG 10
VFSGIQ G
Sbjct: 234 VFSGIQLLG 242




9|Sequence|41|50|IQPTGILHLG

>sp|SYY_HALSA|TYROSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 QPTGILHLG 10
+P+G+LHLG
Sbjct: 37 EPSGVLHLG 45


>sp|SYY_HALS3|TYROSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 QPTGILHLG 10
+P+G+LHLG
Sbjct: 37 EPSGVLHLG 45


>sp|SYY_HALLT|TYROSINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 QPTGILHLG 10
+P+G+LH+G
Sbjct: 37 EPSGVLHIG 45


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PTGILHLG 10
PTG LHLG
Sbjct: 45 PTGRLHLG 52


>sp|SYK_HALSA|LYSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 IQPTGILHLG 10
I P+G+ HLG
Sbjct: 41 ISPSGVPHLG 50


>sp|SYE_NANEQ|GLUTAMATE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 PTGILHLG 10
P+G+LH+G
Sbjct: 92 PSGLLHIG 99


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 PTGILHLG 10
PTG +HLG
Sbjct: 45 PTGRMHLG 52


>sp|SYK_ARCFU|LYSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IQPTGILHLG 10
I P+G +HLG
Sbjct: 24 ISPSGHIHLG 33


>sp|SYK_NATPD|LYSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IQPTGILHLG 10
+ P+G+ HLG
Sbjct: 39 VSPSGVPHLG 48


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 PTGILHLG 10
PTG LH+G
Sbjct: 49 PTGELHMG 56


>sp|SYR_THEAC|ARGININE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PTGILHLG 10
PTG LH+G
Sbjct: 119 PTGPLHIG 126


>sp|SYM_HALSA|METHIONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 PTGILHLG 10
PTG LH+G
Sbjct: 21 PTGDLHIG 28


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PTGILHLG 10
PTG LH+G
Sbjct: 47 PTGNLHIG 54


>sp|SYY_SULTO|TYROSINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 QPTGILHLG 10
+P+G+ H+G
Sbjct: 45 EPSGLFHIG 53


>sp|SYY_SULAC|TYROSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 QPTGILHLG 10
+P+G+ H+G
Sbjct: 40 EPSGLFHIG 48


>sp|SYY_SACS2|TYROSINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 QPTGILHLG 10
+P+G+ H+G
Sbjct: 45 EPSGLFHIG 53


>sp|SYY_SACI7|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 QPTGILHLG 10
+P+G+ H+G
Sbjct: 40 EPSGLFHIG 48


>sp|SYY_SACI6|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 QPTGILHLG 10
+P+G+ H+G
Sbjct: 40 EPSGLFHIG 48


>sp|SYY_SACI4|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 QPTGILHLG 10
+P+G+ H+G
Sbjct: 40 EPSGLFHIG 48


>sp|SYY_SACI3|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 QPTGILHLG 10
+P+G+ H+G
Sbjct: 40 EPSGLFHIG 48


>sp|SYY_SACI2|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 QPTGILHLG 10
+P+G+ H+G
Sbjct: 40 EPSGLFHIG 48


>sp|SYY_SACI1|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 QPTGILHLG 10
+P+G+ H+G
Sbjct: 40 EPSGLFHIG 48


>sp|SYR_METAR|ARGININE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 PTGILHLG 10
PTG LH+G
Sbjct: 121 PTGPLHVG 128


>sp|SYE_METMJ|GLUTAMATE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PTGILHLG 10
P+G LHLG
Sbjct: 109 PSGPLHLG 116


>sp|SYE_METLZ|GLUTAMATE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 PTGILHLG 10
P+G LHLG
Sbjct: 110 PSGPLHLG 117


>sp|SYE_METHJ|GLUTAMATE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PTGILHLG 10
P+G LHLG
Sbjct: 109 PSGPLHLG 116


>sp|SYE_META3|GLUTAMATE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 PTGILHLG 10
P+G LHLG
Sbjct: 108 PSGPLHLG 115


>sp|SYY_METJA|TYROSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QPTGILHLG 10
+P+G +HLG
Sbjct: 36 EPSGKIHLG 44


>sp|SYY_AERPE|TYROSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 QPTGILHLG 10
+P+G+ H+G
Sbjct: 43 EPSGVAHIG 51


>sp|SYV_HALSA|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 PTGILHLG 10
P+G LHLG
Sbjct: 47 PSGNLHLG 54


>sp|SYV_HALS3|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 PTGILHLG 10
P+G LHLG
Sbjct: 47 PSGNLHLG 54


>sp|SYY_METS3|TYROSINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 QPTGILHLG 10
+P+G +HLG
Sbjct: 39 EPSGKIHLG 47


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 PTGILHLG 10
PTG +H+G
Sbjct: 48 PTGSIHMG 55


>sp|SYK_THEKO|LYSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IQPTGILHLG 10
I P+G +H+G
Sbjct: 28 ITPSGYVHIG 37


>sp|SYY_METVS|TYROSINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 QPTGILHLG 10
+P+G +HLG
Sbjct: 45 EPSGKIHLG 53


>sp|SYK_PICTO|LYSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 IQPTGILHLG 10
I P+G +H+G
Sbjct: 21 ISPSGPIHIG 30


>sp|SYY_ARCFU|TYROSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QPTGILHLG 10
+P+G +HLG
Sbjct: 40 EPSGEIHLG 48


>sp|SYW2_HALSA|TRYPTOPHAN--TRNA ligase 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 IQPTGILHLG 10
+ P+G +HLG
Sbjct: 72 VGPSGPMHLG 81


>sp|SYY_METST|TYROSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 QPTGILHLG 10
+P+G +HLG
Sbjct: 39 EPSGKVHLG 47


>sp|SYY_METKA|TYROSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 QPTGILHLG 10
+P+G +HLG
Sbjct: 40 EPSGKVHLG 48


>sp|SYW_THEVO|TRYPTOPHAN--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IQPTGILHLG 10
+ P+G +HLG
Sbjct: 64 LMPSGEMHLG 73


>sp|SYW_THEAC|TRYPTOPHAN--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IQPTGILHLG 10
+ P+G +HLG
Sbjct: 64 LMPSGEMHLG 73


>sp|SYK_HALMA|LYSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 IQPTGILHLG 10
+ P+G+ H+G
Sbjct: 40 VSPSGVPHIG 49


>sp|SYK_PYRHO|LYSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IQPTGILHLG 10
I P+G +H+G
Sbjct: 28 ITPSGYVHVG 37


>sp|SYK_PYRFU|LYSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IQPTGILHLG 10
I P+G +H+G
Sbjct: 28 ITPSGYVHVG 37


>sp|SYK_PYRAB|LYSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 IQPTGILHLG 10
I P+G +H+G
Sbjct: 28 ITPSGYVHVG 37


>sp|SYY_METTH|TYROSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 QPTGILHLG 10
+P+G +HLG
Sbjct: 37 EPSGRIHLG 45


>sp|SYY_METMJ|TYROSINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 QPTGILHLG 10
+P+G +HLG
Sbjct: 36 EPSGEIHLG 44


>sp|SYY_METLZ|TYROSINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 QPTGILHLG 10
+P+G +HLG
Sbjct: 36 EPSGEIHLG 44


>sp|SYY_NATPD|TYROSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PTGILHLG 10
PTG +H+G
Sbjct: 41 PTGEMHIG 48


>sp|SYY_HALMA|TYROSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PTGILHLG 10
PTG +H+G
Sbjct: 40 PTGEMHIG 47


>sp|SYK_THEVO|LYSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IQPTGILHLG 10
I P+G +H+G
Sbjct: 21 ISPSGPIHVG 30


>sp|SYK_THEAC|LYSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IQPTGILHLG 10
I P+G +H+G
Sbjct: 24 ISPSGPIHVG 33


>sp|SYY_METHJ|TYROSINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 QPTGILHLG 10
+P+G +HLG
Sbjct: 36 EPSGEIHLG 44


>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain ATCC

Query: 3 PTGILHLG 10
P GI H+G
Sbjct: 556 PVGIFHMG 563


>sp|SYW_METKA|TRYPTOPHAN--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 IQPTGILHLG 10
+ P+G +HLG
Sbjct: 69 MMPSGRMHLG 78


>sp|UPP_HALWD|URACIL phosphoribosyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 PTGILHLG 10
P G+LH+G
Sbjct: 181 PEGLLHVG 188


>sp|SYY_THEAC|TYROSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IQPTGILHLG 10
I+P+GI H+
Sbjct: 35 IEPSGIPHIA 44


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IQPTGILHLG 10
I P+G +H+G
Sbjct: 28 ITPSGNIHIG 37


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 1 IQPTGILHLG 10
I P+G +H+G
Sbjct: 28 ITPSGNIHIG 37


>sp|SYK_METMP|LYSINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IQPTGILHLG 10
I P+G +H+G
Sbjct: 26 ITPSGHIHIG 35


>sp|SYK_METMI|LYSINE--TRNA ligase|Methanococcus maripaludis (Methanococcus deltae)

Query: 1 IQPTGILHLG 10
I P+G +H+G
Sbjct: 26 ITPSGHIHIG 35


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IQPTGILHLG 10
I P+G +H+G
Sbjct: 28 ITPSGHIHIG 37


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IQPTGILHLG 10
I P+G +H+G
Sbjct: 24 ITPSGHIHIG 33


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain ATCC

Query: 3 PTGILHLG 10
P GI H+G
Sbjct: 556 PVGIFHMG 563


>sp|PUR1_METTH|AMIDOPHOSPHORIBOSYLTRANSFERASE thermautotrophicus (strain ATCC 29096

Query: 1 IQPTGILHL 9
+QP ILHL
Sbjct: 223 VQPGEILHL 231


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PTGILHLG 10
PTG H+G
Sbjct: 45 PTGSFHIG 52


>sp|SYY_METMA|TYROSINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 QPTGILHLG 10
+P+G +H+G
Sbjct: 37 EPSGKIHMG 45


>sp|SYY_METBF|TYROSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 QPTGILHLG 10
+P+G +H+G
Sbjct: 37 EPSGKIHMG 45


>sp|SYY_METAC|TYROSINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 QPTGILHLG 10
+P+G +H+G
Sbjct: 37 EPSGKIHMG 45


>sp|GCH1_SULAC|GTP cyclohydrolase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IQPTGILHLG 10
IQP G++ +G
Sbjct: 148 IQPKGVMVIG 157


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PTGILHLG 10
P+G LH+G
Sbjct: 104 PSGPLHIG 111


>sp|SYE_THEAC|GLUTAMATE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PTGILHLG 10
P+G LH+G
Sbjct: 104 PSGPLHIG 111


>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 PTGILHLG 10
P+G LH+G
Sbjct: 105 PSGPLHIG 112


>sp|SYE_METVS|GLUTAMATE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 PTGILHLG 10
P+G LH+G
Sbjct: 102 PSGPLHIG 109


>sp|SYE_METTM|GLUTAMATE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 3 PTGILHLG 10
P+G LH+G
Sbjct: 104 PSGPLHIG 111


>sp|SYE_METTH|GLUTAMATE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 PTGILHLG 10
P+G LH+G
Sbjct: 105 PSGPLHIG 112


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 PTGILHLG 10
P+G LH+G
Sbjct: 106 PSGPLHIG 113


>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 PTGILHLG 10
P+G LH+G
Sbjct: 105 PSGPLHIG 112


>sp|SYE_METMP|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 PTGILHLG 10
P+G LH+G
Sbjct: 102 PSGPLHIG 109


>sp|SYE_METM7|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 PTGILHLG 10
P+G LH+G
Sbjct: 102 PSGPLHIG 109


>sp|SYE_METM6|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 PTGILHLG 10
P+G LH+G
Sbjct: 102 PSGPLHIG 109


>sp|SYE_METM5|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 PTGILHLG 10
P+G LH+G
Sbjct: 102 PSGPLHIG 109


>sp|SYE_METKA|GLUTAMATE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 PTGILHLG 10
P+G LH+G
Sbjct: 107 PSGPLHIG 114


>sp|SYE_METJA|GLUTAMATE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PTGILHLG 10
P+G LH+G
Sbjct: 100 PSGPLHIG 107


>sp|SYY_METBU|TYROSINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 QPTGILHLG 10
+P+G +H+G
Sbjct: 37 EPSGKIHMG 45


>sp|SYE_SULAC|GLUTAMATE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PTGILHLG 10
P G LHLG
Sbjct: 108 PDGPLHLG 115


>sp|SYE_SACS2|GLUTAMATE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PTGILHLG 10
P G LHLG
Sbjct: 110 PDGPLHLG 117


>sp|SYE_METS5|GLUTAMATE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 3 PTGILHLG 10
P G LHLG
Sbjct: 106 PDGPLHLG 113


>sp|SYY_THEVO|TYROSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IQPTGILHLG 10
I+P+GI H+
Sbjct: 34 IEPSGIPHVA 43


>sp|SYE_METB6|GLUTAMATE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 PTGILHLG 10
P+G LH+G
Sbjct: 110 PSGPLHIG 117


>sp|SYY_METMP|TYROSINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 QPTGILHLG 10
+P+G +H+G
Sbjct: 44 EPSGRIHMG 52


>sp|SYK_METJA|LYSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IQPTGILHLG 10
I P+G +H+G
Sbjct: 26 ITPSGHIHVG 35


>sp|DNAK_METBF|CHAPERONE protein DnaK|Methanosarcina barkeri (strain Fusaro /

Query: 1 IQPTGILHLG 10
I GILH+G
Sbjct: 452 IDANGILHVG 461


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 PTGILHLG 10
P+G +H+G
Sbjct: 36 PSGAMHIG 43


>sp|G1PDH_SACS2|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Saccharolobus solfataricus (strain ATCC

Query: 1 IQPTGILH 8
I P GILH
Sbjct: 260 IHPEGILH 267


>sp|SYR_NATPD|ARGININE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PTGILHLG 10
PTG +H+G
Sbjct: 125 PTGPVHVG 132


>sp|SYR_HALWD|ARGININE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 PTGILHLG 10
PTG +H+G
Sbjct: 129 PTGPVHVG 136


>sp|SYR_HALMA|ARGININE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PTGILHLG 10
PTG +H+G
Sbjct: 125 PTGPVHVG 132


>sp|SYR_HALLT|ARGININE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 PTGILHLG 10
PTG +H+G
Sbjct: 126 PTGPVHVG 133


>sp|SYW_METMA|TRYPTOPHAN--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PTGILHLG 10
P+G +HLG
Sbjct: 74 PSGKVHLG 81


>sp|SYW_METAC|TRYPTOPHAN--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PTGILHLG 10
P+G +HLG
Sbjct: 74 PSGKVHLG 81


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 PTGILHLG 10
PTG H+G
Sbjct: 46 PTGNFHIG 53


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PTGILHLG 10
PTG H+G
Sbjct: 49 PTGNFHIG 56


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PTGILHLG 10
PTG H+G
Sbjct: 49 PTGNFHIG 56


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PTGILHLG 10
PTG H+G
Sbjct: 49 PTGNFHIG 56


>sp|SYR_THESM|ARGININE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 IQPTGILHLG 10
+ PT LH+G
Sbjct: 134 VNPTKPLHMG 143


>sp|SYR_THEKO|ARGININE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IQPTGILHLG 10
+ PT LH+G
Sbjct: 133 VNPTKPLHMG 142


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IQPTGILHLG 10
+ PT LH+G
Sbjct: 128 VNPTKPLHMG 137


>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IQPTGILHLG 10
+ PT LH+G
Sbjct: 128 VNPTKPLHMG 137


>sp|SYR_PYRAB|ARGININE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 IQPTGILHLG 10
+ PT LH+G
Sbjct: 128 VNPTKPLHMG 137


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 PTGILHLG 10
P G LH+G
Sbjct: 124 PNGPLHIG 131


>sp|SYR_METS3|ARGININE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 PTGILHLG 10
P G LH+G
Sbjct: 133 PNGPLHIG 140


>sp|SYR_METKA|ARGININE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 PTGILHLG 10
P G LH+G
Sbjct: 141 PNGPLHIG 148


>sp|SYR_METJA|ARGININE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PTGILHLG 10
P G LH+G
Sbjct: 126 PNGPLHIG 133


>sp|SYR_META3|ARGININE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 PTGILHLG 10
P G LH+G
Sbjct: 126 PNGPLHIG 133


>sp|SYW_METTH|TRYPTOPHAN--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 IQPTGILHLG 10
+ P+G +H+G
Sbjct: 68 MMPSGRMHIG 77


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 PTGILHLG 10
P G +H+G
Sbjct: 45 PNGTIHIG 52


>sp|SYL_PYRNV|LEUCINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 PTGILHLG 10
P G +H+G
Sbjct: 45 PNGAIHIG 52


>sp|SYL_PYRAR|LEUCINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 PTGILHLG 10
P G +H+G
Sbjct: 45 PNGAIHIG 52


>sp|SYL_PYRAE|LEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PTGILHLG 10
P G +H+G
Sbjct: 45 PNGAIHIG 52


>sp|FPOH_METMA|F(420)H(2) dehydrogenase subunit H|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IQPTGILHL 9
I PTGIL L
Sbjct: 290 IAPTGILLL 298


>sp|DPHB_METPE|DIPHTHINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 PTGILH 8
PTGI+H
Sbjct: 105 PTGIIH 110




10|Sequence|46|55|ILHLGNYLGA

>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LHLGNYLG 9
+HLG YLG
Sbjct: 453 IHLGEYLG 460


>sp|SYS_SACS2|SERINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ILHLGNYLGA 10
+LHLGN L A
Sbjct: 168 VLHLGNTLKA 177


>sp|SYS_SACI7|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 ILHLGNYLGA 10
+LHLGN L A
Sbjct: 168 VLHLGNTLKA 177


>sp|SYS_SACI6|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 ILHLGNYLGA 10
+LHLGN L A
Sbjct: 168 VLHLGNTLKA 177


>sp|SYS_SACI4|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 ILHLGNYLGA 10
+LHLGN L A
Sbjct: 168 VLHLGNTLKA 177


>sp|SYS_SACI3|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 ILHLGNYLGA 10
+LHLGN L A
Sbjct: 168 VLHLGNTLKA 177


>sp|SYS_SACI2|SERINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 ILHLGNYLGA 10
+LHLGN L A
Sbjct: 168 VLHLGNTLKA 177


>sp|SYS_SACI1|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 ILHLGNYLGA 10
+LHLGN L A
Sbjct: 168 VLHLGNTLKA 177


>sp|END4_CENSY|PROBABLE endonuclease 4|Cenarchaeum symbiosum (strain A)

Query: 1 ILHLGNYLGA 10
+ HLG++LGA
Sbjct: 106 VTHLGSHLGA 115


>sp|RS19_PYRNV|SMALL ribosomal subunit protein uS19|Pyrobaculum neutrophilum (strain DSM

Query: 3 HLGNYLG 9
H+G+YLG
Sbjct: 124 HIGHYLG 130


>sp|RS19_PYRIL|SMALL ribosomal subunit protein uS19|Pyrobaculum islandicum (strain DSM

Query: 3 HLGNYLG 9
H+G+YLG
Sbjct: 126 HIGHYLG 132


>sp|RS19_PYRCJ|SMALL ribosomal subunit protein uS19|Pyrobaculum calidifontis (strain DSM

Query: 3 HLGNYLG 9
H+G+YLG
Sbjct: 124 HIGHYLG 130


>sp|RS19_PYRAR|SMALL ribosomal subunit protein uS19|Pyrobaculum arsenaticum (strain DSM

Query: 3 HLGNYLG 9
H+G+YLG
Sbjct: 125 HIGHYLG 131


>sp|RS19_PYRAE|SMALL ribosomal subunit protein uS19|Pyrobaculum aerophilum (strain ATCC

Query: 3 HLGNYLG 9
H+G+YLG
Sbjct: 124 HIGHYLG 130


>sp|RS19_CALMQ|SMALL ribosomal subunit protein uS19|Caldivirga maquilingensis (strain

Query: 3 HLGNYLG 9
H+G+YLG
Sbjct: 153 HIGHYLG 159


>sp|NADE_SULTO|NH(3)-DEPENDENT NAD(+) synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 LGNYLG 9
LGNYLG
Sbjct: 177 LGNYLG 182


>sp|CPGS_METKA|CYCLIC 2,3-diphosphoglycerate synthetase|Methanopyrus kandleri (strain

Query: 3 HLGNYLG 9
H+G YLG
Sbjct: 281 HIGGYLG 287


>sp|END4_NITMS|PROBABLE endonuclease 4|Nitrosopumilus maritimus (strain SCM1)

Query: 1 ILHLGNYLG 9
+ HLG++LG
Sbjct: 106 VTHLGSHLG 114


>sp|TRUD_NANEQ|PROBABLE tRNA pseudouridine synthase D|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 HLGNYL 8
HLGNY
Sbjct: 122 HLGNYF 127


>sp|MCRA_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 1 ILHLGNYL 8
++H+G YL
Sbjct: 260 VIHMGTYL 267


>sp|MCRA_METTH|METHYL-COENZYME M reductase subunit alpha|Methanothermobacter thermautotrophicus

Query: 1 ILHLGNYL 8
++H+G YL
Sbjct: 260 VIHMGTYL 267


>sp|SYY_METJA|TYROSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LHLGNYL 8
+HLG+YL
Sbjct: 41 IHLGHYL 47


>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LHLGNYL 8
+HLG+YL
Sbjct: 471 VHLGDYL 477


>sp|SYY_HALSA|TYROSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ILHLGNYLGA 10
+LHLG+ L A
Sbjct: 41 VLHLGHLLTA 50


>sp|SYY_HALS3|TYROSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 ILHLGNYLGA 10
+LHLG+ L A
Sbjct: 41 VLHLGHLLTA 50


>sp|CBID_METS3|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 ILHLGNYLG 9
I+ GNY+G
Sbjct: 228 IIQTGNYVG 236


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 1 ILHLGNYL 8
ILHLG+ L
Sbjct: 410 ILHLGDML 417


>sp|PGMI_THEVO|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Thermoplasma volcanium

Query: 1 ILHLGNYL 8
++H G+YL
Sbjct: 271 LIHFGDYL 278


>sp|DPCKG_PYRAE|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ILHLGNYLGA 10
I+ G+YLGA
Sbjct: 108 IVAYGHYLGA 117


>sp|SYY_METVS|TYROSINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LHLGNYL 8
+HLG+YL
Sbjct: 50 IHLGHYL 56


>sp|SYY_METMP|TYROSINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LHLGNYL 8
+H+G+YL
Sbjct: 49 IHMGHYL 55


>sp|MCRA_METKA|METHYL-COENZYME M reductase I subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 HLGNYLG 9
HLG Y G
Sbjct: 487 HLGEYAG 493


>sp|MCRA_METFE|METHYL-COENZYME M reductase subunit alpha|Methanothermus fervidus

Query: 3 HLGNYLG 9
HLG Y G
Sbjct: 488 HLGEYAG 494


>sp|HMDH_PYRAB|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus abyssi (strain GE5 /

Query: 3 HLGNYLGA 10
H GN +GA
Sbjct: 292 HFGNIVGA 299




11|Sequence|51|60|NYLGAIESWV

>sp|TRM56_METS3|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanobrevibacter smithii

Query: 1 NYLGAIESW 9
NY+G I W
Sbjct: 67 NYMGVINKW 75


>sp|SAT_PYRAB|SULFATE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 NYLGAIESW 9
NY G E+W
Sbjct: 290 NYYGPYEAW 298


>sp|SAT_HYPBU|SULFATE adenylyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 NYLGAIESW 9
NY G E+W
Sbjct: 293 NYYGPYEAW 301


>sp|SAT_IGNH4|SULFATE adenylyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 NYLGAIESW 9
NY G E+W
Sbjct: 293 NYYGPYEAW 301


>sp|VHUA_METVO|F420-NON-REDUCING hydrogenase vhu subunit A|Methanococcus voltae

Query: 1 NYLGAIESW 9
N LG I++W
Sbjct: 214 NSLGVIDTW 222


>sp|Y3532_METJA|UNCHARACTERIZED protein MJECL32|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LGAIESW 9
+GAI+SW
Sbjct: 427 IGAIKSW 433


>sp|PELO_NITMS|PROTEIN pelota homolog|Nitrosopumilus maritimus (strain SCM1)

Query: 1 NYLGAIESWV 10
N +GA+ES V
Sbjct: 284 NQMGAVESMV 293


>sp|ACDD_METJA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanocaldococcus

Query: 1 NYLGAIESWV 10
N +GA E+W+
Sbjct: 327 NAIGAREAWM 336


>sp|DTDA_KORCO|D-AMINOACYL-TRNA deacylase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 LGAIESW 9
L AIESW
Sbjct: 163 LEAIESW 169


>sp|POK_THEKO|PANTOATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 NYLGAIESW 9
++LG +E W
Sbjct: 82 DFLGEVEVW 90


>sp|PSTS_METJA|PHOSPHATE-BINDING protein PstS|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YLGAIESW 9
+LG IE W
Sbjct: 160 FLGKIEYW 167


>sp|CCA_METMP|CCA-ADDING enzyme|Methanococcus maripaludis (strain DSM 14266

Query: 1 NYLGAIESW 9
N L A+++W
Sbjct: 203 NLLSAVQTW 211


>sp|Y2042_PYRFU|UPF0215 protein PF2042|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NYLGAIESWV 10
+ LGA+ W+
Sbjct: 40 DVLGAVSRWI 49


>sp|Y1571_PYRHO|PUTATIVE transport protein PH1571|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NYLGAIESWV 10
NYL A SW+
Sbjct: 91 NYLDAFFSWL 100


>sp|SYM_PICTO|METHIONINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 NYLGAIESW 9
NYL E+W
Sbjct: 202 NYLNTRENW 210




12|Sequence|56|65|IESWVRLQDE

>sp|AROB_THEKO|3-DEHYDROQUINATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 WVRLQDE 10
W RLQ+E
Sbjct: 68 WKRLQEE 74


>sp|Y883_PYRHO|IRON-SULFUR cluster assembly SufBD family|Pyrococcus horikoshii (strain ATCC

Query: 3 SWVRLQDE 10
SWV +DE
Sbjct: 142 SWVSYEDE 149


>sp|RRP4_PICTO|EXOSOME complex component Rrp4|Picrophilus torridus (strain ATCC 700027

Query: 2 ESWVRLQD 9
ESW+ L+D
Sbjct: 123 ESWLSLKD 130


>sp|GGGPS_HALMA|GERANYLGERANYLGLYCERYL phosphate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 ESWVRLQDE 10
+ W+R+ DE
Sbjct: 101 KEWIRIDDE 109


>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 2 ESWVRLQDE 10
E+W L+DE
Sbjct: 176 ETWNSLEDE 184


>sp|TREH_THEVO|TREHALASE volcanium (strain ATCC 51530

Query: 1 IESWVRLQDE 10
I+ W +QDE
Sbjct: 453 IKQWKSIQDE 462


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 IESWVRLQD 9
+E+W +LQ+
Sbjct: 741 VEAWYKLQE 749




13|Sequence|61|70|RLQDEYDSVL

>sp|Y1815_ARCFU|UNCHARACTERIZED aminotransferase AF_1815|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RLQDEYDSV 9
+L+DEYD V
Sbjct: 331 KLKDEYDFV 339


>sp|PSA_HALSA|PROTEASOME subunit alpha|Halobacterium salinarum (strain ATCC 700922

Query: 2 LQDEYDSVL 10
L+DEYD+ L
Sbjct: 178 LEDEYDAGL 186


>sp|PSA_HALS3|PROTEASOME subunit alpha|Halobacterium salinarum (strain ATCC 29341

Query: 2 LQDEYDSVL 10
L+DEYD+ L
Sbjct: 178 LEDEYDAGL 186


>sp|PYCA_ARCFU|PYRUVATE carboxylase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RLQDEYDSVL 10
R+ +EYDS++
Sbjct: 374 RIPEEYDSMI 383


>sp|IF2A_ARCFU|TRANSLATION initiation factor 2 subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 RLQDEYDSV 9
+L EYDSV
Sbjct: 132 KLMKEYDSV 140


>sp|GYRA_HALWD|DNA gyrase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LQDEYDSV 9
++DEY+SV
Sbjct: 458 IEDEYESV 465


>sp|TRPE_METJA|ANTHRANILATE synthase component 1|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LQDEYDSVL 10
L+D YDS L
Sbjct: 366 LKDNYDSFL 374


>sp|RL23_META3|LARGE ribosomal subunit protein uL23|Methanococcus aeolicus (strain

Query: 1 RLQDEYDS 8
+L+DEYD+
Sbjct: 69 KLKDEYDA 76


>sp|HUTG_HALSA|FORMIMIDOYLGLUTAMASE salinarum (strain ATCC 700922

Query: 4 DEYDSVL 10
D+YD+VL
Sbjct: 34 DDYDAVL 40


>sp|HUTG_HALS3|FORMIMIDOYLGLUTAMASE salinarum (strain ATCC 29341

Query: 4 DEYDSVL 10
D+YD+VL
Sbjct: 34 DDYDAVL 40


>sp|FTSZ2_HALVD|CELL division protein FtsZ 2|Haloferax volcanii (strain ATCC 29605

Query: 1 RLQDEY 6
R+QDEY
Sbjct: 315 RIQDEY 320




14|Sequence|66|75|YDSVLYSIVD

>sp|PANB_HALMA|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Haloarcula marismortui (strain ATCC

Query: 1 YDSVLYSIVD 10
YD+V SIVD
Sbjct: 22 YDAVTASIVD 31


>sp|NADE_METKA|NH(3)-DEPENDENT NAD(+) synthetase|Methanopyrus kandleri (strain AV19 /

Query: 2 DSVLYSIVD 10
D++LY++VD
Sbjct: 220 DALLYALVD 228


>sp|PURA_METVS|ADENYLOSUCCINATE synthetase|Methanococcus vannielii (strain ATCC 35089

Query: 1 YDSVLYSIVD 10
YD + Y I+D
Sbjct: 288 YDPLCYGIID 297


>sp|PURA_METMP|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YDSVLYSIVD 10
YDS Y I D
Sbjct: 288 YDSDCYGITD 297


>sp|COFD_ARCFU|2-PHOSPHO-L-LACTATE transferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DSVLYSIVD 10
DSV+Y+I +
Sbjct: 45 DSVIYAIAE 53


>sp|GLMM_META3|PHOSPHOGLUCOSAMINE mutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 YDSVLYSIVD 10
YD LY ++D
Sbjct: 348 YDKKLYELID 357


>sp|RS4E_PYRNV|SMALL ribosomal subunit protein eS4|Pyrobaculum neutrophilum (strain DSM

Query: 1 YDSVLYSI 8
+DSVLY +
Sbjct: 156 FDSVLYDL 163


>sp|IF2P_HALWD|PROBABLE translation initiation factor IF-2|Haloquadratum walsbyi (strain

Query: 2 DSVLYSIVD 10
D V+Y +VD
Sbjct: 458 DDVIYQLVD 466


>sp|IF2P_METS5|PROBABLE translation initiation factor IF-2|Metallosphaera sedula (strain

Query: 1 YDSVLYSIVD 10
Y+ ++Y ++D
Sbjct: 433 YNDIIYQLID 442


>sp|RS4E_PYRAE|SMALL ribosomal subunit protein eS4|Pyrobaculum aerophilum (strain ATCC

Query: 1 YDSVLYSI 8
+DSVLY +
Sbjct: 156 FDSVLYDL 163




15|Sequence|71|80|YSIVDLHSIT

>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 1 YSIVDLHSI 9
Y++VDLH++
Sbjct: 312 YTMVDLHNV 320


>sp|LYSY_PYRNV|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 SIVDLHS 8
SIVDLHS
Sbjct: 190 SIVDLHS 196


>sp|LYSY_PYRIL|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 SIVDLHS 8
S+VDLHS
Sbjct: 190 SVVDLHS 196


>sp|LYSY_PYRCJ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 SIVDLHS 8
S+VDLHS
Sbjct: 189 SVVDLHS 195


>sp|LYSY_PYRAE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 SIVDLHS 8
S+VDLHS
Sbjct: 189 SVVDLHS 195


>sp|AMPP2_ARCFU|AMP phosphorylase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SIVDLHSI 9
++VD+HSI
Sbjct: 160 TVVDMHSI 167


>sp|METE_AERPE|METHIONINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 YSIVDLHS 8
Y ++D+HS
Sbjct: 264 YGVIDVHS 271


>sp|AMPPA_METVS|AMP phosphorylase|Methanococcus vannielii (strain ATCC 35089

Query: 3 IVDLHSI 9
+VD+HSI
Sbjct: 162 VVDIHSI 168


>sp|AMPPA_METMP|AMP phosphorylase|Methanococcus maripaludis (strain DSM 14266

Query: 3 IVDLHSI 9
+VD+HSI
Sbjct: 162 VVDIHSI 168


>sp|AMPPA_METM7|AMP phosphorylase|Methanococcus maripaludis (strain C7 /

Query: 3 IVDLHSI 9
+VD+HSI
Sbjct: 162 VVDIHSI 168


>sp|AMPPA_METM6|AMP phosphorylase|Methanococcus maripaludis (strain C6 /

Query: 3 IVDLHSI 9
+VD+HSI
Sbjct: 162 VVDIHSI 168


>sp|AMPPA_METM5|AMP phosphorylase|Methanococcus maripaludis (strain C5 /

Query: 3 IVDLHSI 9
+VD+HSI
Sbjct: 162 VVDIHSI 168


>sp|AMPPA_META3|AMP phosphorylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 IVDLHSI 9
+VD+HSI
Sbjct: 161 VVDVHSI 167




16|Sequence|76|85|LHSITVPQDP

>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 SITVPQDP 10
S+TVPQ+P
Sbjct: 407 SVTVPQEP 414


>sp|FOLCP_HALVD|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 1 LHSITVPQDP 10
+HSI P DP
Sbjct: 692 MHSIDAPVDP 701


>sp|F16A1_HALMA|FRUCTOSE-1,6-BISPHOSPHATASE class 1 1|Haloarcula marismortui (strain ATCC 43049

Query: 4 ITVPQDP 10
+TVP+DP
Sbjct: 166 VTVPEDP 172


>sp|GLNA_SACS2|GLUTAMINE synthetase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LHSITVPQD 9
LH IT+P D
Sbjct: 31 LHHITIPAD 39


>sp|VHUB_METVO|POLYFERREDOXIN protein VhuB|Methanococcus voltae

Query: 4 ITVPQDP 10
+T+PQ+P
Sbjct: 119 VTIPQEP 125


>sp|DPCKG_CALMQ|GTP-DEPENDENT dephospho-CoA kinase|Caldivirga maquilingensis (strain ATCC

Query: 3 SITVPQDP 10
+I++P+DP
Sbjct: 25 AISIPRDP 32


>sp|RL30_METST|LARGE ribosomal subunit protein uL30|Methanosphaera stadtmanae (strain

Query: 2 HSITVPQDP 10
H++ +P+ P
Sbjct: 31 HAVVIPETP 39


>sp|PYRH_METKA|URIDYLATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 LHSITVPQDP 10
LH + VP+ P
Sbjct: 85 LHDLHVPETP 94


>sp|KPRS_SULTO|RIBOSE-PHOSPHATE pyrophosphokinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 TVPQDP 10
T+PQDP
Sbjct: 270 TIPQDP 275


>sp|EF2_ARCFU|ELONGATION factor 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 ITVPQD 9
ITVPQD
Sbjct: 628 ITVPQD 633


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 4 ITVPQD 9
+TVPQD
Sbjct: 1154 VTVPQD 1159


>sp|AATA_NITMS|A-TYPE ATP synthase subunit A|Nitrosopumilus maritimus (strain SCM1)

Query: 2 HSITVPQD 9
HSI VP D
Sbjct: 147 HSIMVPPD 154


>sp|AATA_CENSY|A-TYPE ATP synthase subunit A|Cenarchaeum symbiosum (strain A)

Query: 2 HSITVPQD 9
HSI VP D
Sbjct: 147 HSIMVPPD 154


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 2 HSITVPQDP 10
H+ T P DP
Sbjct: 751 HNATTPLDP 759


>sp|KPRS_METKA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanopyrus kandleri (strain AV19 /

Query: 1 LHSITVPQD 9
+HS++ PQD
Sbjct: 52 VHSMSPPQD 60


>sp|KATG_METB6|CATALASE-PEROXIDASE boonei (strain DSM 21154

Query: 2 HSITVPQDP 10
H +TVP P
Sbjct: 551 HKVTVPFTP 559


>sp|EF2_METS5|ELONGATION factor 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 LHSITVPQDP 10
LH T+ +DP
Sbjct: 592 LHDATIHEDP 601




17|Sequence|81|90|VPQDPAVLRQ

>sp|HIS5_PYRFU|IMIDAZOLE glycerol phosphate synthase subunit|Pyrococcus furiosus (strain

Query: 1 VPQDPAVL 8
VPQDP ++
Sbjct: 143 VPQDPDII 150


>sp|MRE11_NANEQ|DNA double-strand break repair protein|Nanoarchaeum equitans (strain

Query: 1 VPQDPAVL 8
+PQDPA +
Sbjct: 183 LPQDPAAI 190


>sp|CARA_PYRAE|CARBAMOYL phosphate synthase small chain|Pyrobaculum aerophilum (strain ATCC

Query: 2 PQDPAVLRQ 10
P+DPAVL +
Sbjct: 125 PEDPAVLME 133


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 2 PQDPAVL 8
PQDP +L
Sbjct: 767 PQDPTIL 773


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 1 VPQDPAV 7
+P+DPAV
Sbjct: 494 IPEDPAV 500


>sp|CBIA_METBF|COBYRINATE a,c-diamide synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VPQDPAV 7
VP+DPA+
Sbjct: 190 VPRDPAM 196


>sp|FAEHP_METTH|BIFUNCTIONAL enzyme Fae/Hps|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 VPQDPAVLR 9
+PQDP +R
Sbjct: 389 MPQDPDTMR 397


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 QDPAVLR 9
+DPAVLR
Sbjct: 737 RDPAVLR 743


>sp|F16A1_HALMA|FRUCTOSE-1,6-BISPHOSPHATASE class 1 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 VPQDPAVL 8
VP+DP V
Sbjct: 168 VPEDPTVF 175


>sp|RNH2_METTP|RIBONUCLEASE HII|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 PQDPAVLR 9
P DPA +R
Sbjct: 173 PSDPATVR 180


>sp|EF2_METMJ|ELONGATION factor 2|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PQDPAVLR 9
P DPA+++
Sbjct: 495 PMDPAIVK 502




18|Sequence|86|95|AVLRQSILDM

>sp|MUTL_HALSA|DNA mismatch repair protein MutL|Halobacterium salinarum (strain ATCC

Query: 1 AVLRQSILD 9
AVLR+++LD
Sbjct: 267 AVLREAVLD 275


>sp|MUTL_HALS3|DNA mismatch repair protein MutL|Halobacterium salinarum (strain ATCC

Query: 1 AVLRQSILD 9
AVLR+++LD
Sbjct: 267 AVLREAVLD 275


>sp|RFRNP_ARCFU|RNA-FREE ribonuclease P|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AVLRQSILD 9
AV+RQ ILD
Sbjct: 152 AVMRQGILD 160


>sp|PURP_NITMS|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 VLRQSILD 9
VLR+S+LD
Sbjct: 242 VLRESLLD 249




19|Sequence|91|100|SILDMTAVLL

***** No hits found ******


20|Sequence|96|105|TAVLLACGIN

>sp|FTTA_METTH|TRANSCRIPTION termination factor FttA|Methanothermobacter thermautotrophicus

Query: 3 VLLACGIN 10
VLL CG+N
Sbjct: 205 VLLDCGVN 212


>sp|RNP2_METVS|RIBONUCLEASE P protein component 2|Methanococcus vannielii (strain ATCC 35089

Query: 1 TAVLLACGIN 10
+AVL+ CGI+
Sbjct: 37 SAVLIYCGIH 46


>sp|DNAG_METLZ|DNA primase DnaG|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 LLACGIN 10
LL CGIN
Sbjct: 185 LLKCGIN 191


>sp|TRM56_HYPBU|TRNA (cytidine(56)-2'-O)-methyltransferase|Hyperthermus butylicus

Query: 5 LACGIN 10
LACG+N
Sbjct: 71 LACGVN 76


>sp|PIMT_METHJ|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 AVLLACG 8
A+L+ACG
Sbjct: 94 AILVACG 100


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 5 LACGIN 10
L+CGIN
Sbjct: 869 LSCGIN 874


>sp|ORNAT_THEKO|ORNITHINE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 VLLACGIN 10
VLL CG N
Sbjct: 407 VLLGCGDN 414


>sp|MCH_METMP|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 2 AVLLACGIN 10
A +L CG+N
Sbjct: 33 ATVLDCGVN 41


>sp|MCH_METM7|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C7 /

Query: 2 AVLLACGIN 10
A +L CG+N
Sbjct: 33 ATVLDCGVN 41


>sp|MCH_METM5|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C5 /

Query: 2 AVLLACGIN 10
A +L CG+N
Sbjct: 33 ATVLDCGVN 41


>sp|MCH_METJA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AVLLACGIN 10
A +L CG+N
Sbjct: 33 ATVLDCGVN 41


>sp|COFG_METMJ|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 LLACGIN 10
L+ CG+N
Sbjct: 251 LIGCGVN 257


>sp|MCH_META3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 AVLLACGIN 10
A +L CG+N
Sbjct: 33 ATVLDCGVN 41




21|Sequence|101|110|ACGINPEKSI

>sp|PCNA_METPE|DNA polymerase sliding clamp|Methanosphaerula palustris (strain ATCC

Query: 1 ACGINPEKSI 10
A GI+PEK I
Sbjct: 153 ALGIDPEKGI 162


>sp|NADB_PYRHO|L-ASPARTATE oxidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GINPEKSI 10
GINPEK +
Sbjct: 293 GINPEKDL 300


>sp|Y505_METJA|UNCHARACTERIZED protein MJ0505|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CGINPEK 8
CG NP+K
Sbjct: 136 CGFNPKK 142


>sp|AATD_PYRFU|A-TYPE ATP synthase subunit D|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ACGINPEKSI 10
A G+NP K I
Sbjct: 83 AIGVNPNKEI 92


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 1 ACGINPEKS 9
ACG++P ++
Sbjct: 123 ACGVDPSRA 131


>sp|Y1127_METJA|UNCHARACTERIZED protein MJ1127|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GINPEKSI 10
G+NPEK +
Sbjct: 179 GLNPEKVV 186


>sp|HMGCS_METMP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ACGINPE 7
ACG++P+
Sbjct: 98 ACGVSPD 104


>sp|HMGCS_METM7|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C7 /

Query: 1 ACGINPE 7
ACG++P+
Sbjct: 98 ACGVSPD 104


>sp|HMGCS_METM5|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C5 /

Query: 1 ACGINPE 7
ACG++P+
Sbjct: 98 ACGVSPD 104


>sp|HMGCS_METM6|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C6 /

Query: 1 ACGINPE 7
ACG++P+
Sbjct: 98 ACGVSPD 104


>sp|FTTA_CENSY|TRANSCRIPTION termination factor FttA|Cenarchaeum symbiosum (strain A)

Query: 2 CGINP 6
CG+NP
Sbjct: 217 CGVNP 221


>sp|PPS_THEON|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Thermococcus onnurineus (strain NA1)

Query: 3 GINPEKSI 10
GINP K I
Sbjct: 129 GINPTKRI 136


>sp|PPS_THEKO|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GINPEKSI 10
GINP K I
Sbjct: 129 GINPTKRI 136


>sp|IF2A_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 GINPEKSI 10
G+NPE+ +
Sbjct: 68 GVNPERKV 75


>sp|ASPD_METTH|L-ASPARTATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 CGINPEKSI 10
C +NP+ S+
Sbjct: 228 CSVNPKTSV 236


>sp|MCH_METKA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanopyrus kandleri (strain AV19 /

Query: 2 CGINPE 7
CG++PE
Sbjct: 157 CGVDPE 162


>sp|RL18_METST|LARGE ribosomal subunit protein uL18|Methanosphaera stadtmanae (strain

Query: 2 CGINPEK 8
CG++PE+
Sbjct: 170 CGLSPEE 176


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ACGINP 6
ACG++P
Sbjct: 123 ACGVDP 128


>sp|RL10E_METM7|LARGE ribosomal subunit protein uL16|Methanococcus maripaludis (strain C7

Query: 3 GINPEK 8
G+NPEK
Sbjct: 136 GVNPEK 141


>sp|RL10E_METM6|LARGE ribosomal subunit protein uL16|Methanococcus maripaludis (strain C6

Query: 3 GINPEK 8
G+NPEK
Sbjct: 136 GVNPEK 141


>sp|SYC_PYRAR|CYSTEINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 CGINPEKSI 10
CGI P S+
Sbjct: 27 CGITPYDSV 35


>sp|FRHA_METVO|COENZYME F420 hydrogenase subunit alpha|Methanococcus voltae

Query: 1 ACGINPEK 8
ACGI P K
Sbjct: 81 ACGIVPPK 88


>sp|SYW_SULTO|TRYPTOPHAN--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ACGINPEKS 9
A G NP+K+
Sbjct: 142 AVGFNPDKT 150


>sp|SYW_SACS2|TRYPTOPHAN--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ACGINPEKS 9
A G NP+K+
Sbjct: 141 AVGFNPDKT 149


>sp|RL10E_METMP|LARGE ribosomal subunit protein uL16|Methanococcus maripaludis (strain

Query: 3 GINPEK 8
G+NPEK
Sbjct: 136 GVNPEK 141


>sp|RNH2_METS3|RIBONUCLEASE HII|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 INPEKSI 10
+NPEK+I
Sbjct: 97 LNPEKAI 103


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 2 CGINPEK 8
CGI+P++
Sbjct: 492 CGIDPDE 498


>sp|RADB_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis

Query: 3 GINPEKSI 10
G+NPE+++
Sbjct: 70 GLNPEEAL 77


>sp|MDH_PICTO|MALATE dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 1 ACGINPEKSI 10
A GI+PE+ I
Sbjct: 138 ASGISPERII 147


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 GINPEKSI 10
GINP K +
Sbjct: 183 GINPPKGV 190


>sp|MOAA_THEVO|PROBABLE GTP 3',8-cyclase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GINPEKSI 10
GIN EK+I
Sbjct: 282 GINDEKTI 289


>sp|HCP_METVS|HYDROXYLAMINE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 2 CGINPEK 8
CG PEK
Sbjct: 95 CGCTPEK 101


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ACGINP 6
ACG++P
Sbjct: 123 ACGVDP 128


>sp|Y2246_METAC|UNCHARACTERIZED serpin-like protein MA_2246|Methanosarcina acetivorans (strain ATCC

Query: 3 GINPEKSI 10
GI P+KS+
Sbjct: 347 GITPDKSL 354


>sp|GLMM_METVS|PHOSPHOGLUCOSAMINE mutase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ACGINP 6
ACGI+P
Sbjct: 170 ACGISP 175


>sp|HIS8_METM6|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C6 /

Query: 3 GINPEKSI 10
GI+PEK I
Sbjct: 31 GIDPEKII 38


>sp|HIS8_METM7|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C7 /

Query: 3 GINPEKSI 10
GI+PEK I
Sbjct: 31 GIDPEKII 38


>sp|SPT4_METJA|TRANSCRIPTION elongation factor Spt4|Methanocaldococcus jannaschii (strain ATCC

Query: 4 INPEKS 9
INPEKS
Sbjct: 34 INPEKS 39


>sp|HIS8_METM5|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C5 /

Query: 3 GINPEKSI 10
GI+PEK I
Sbjct: 31 GIDPEKII 38




22|Sequence|106|115|PEKSILFQQS

>sp|T1SH_METJA|TYPE I restriction enzyme MjaIX|Methanocaldococcus jannaschii (strain

Query: 2 EKSILFQQS 10
EKSI+FQ+S
Sbjct: 301 EKSIIFQKS 309


>sp|FAEHP_METPE|BIFUNCTIONAL enzyme Fae/Hps|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PEKSILFQQ 9
PEK+IL+++
Sbjct: 146 PEKTILYEK 154


>sp|SQRD_ACIAM|SULFIDE-QUINONE reductase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 PEKSILFQQ 9
PEK I FQ+
Sbjct: 67 PEKGIQFQE 75


>sp|SYW_PYRHO|TRYPTOPHAN--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PEKSILFQQS 10
P+K+ +FQ S
Sbjct: 147 PDKTFIFQNS 156


>sp|SYW_THEKO|TRYPTOPHAN--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PEKSILFQQS 10
P+K+ +FQ S
Sbjct: 146 PDKTFIFQNS 155


>sp|SYW_PYRFU|TRYPTOPHAN--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PEKSILFQQS 10
P+K+ +FQ S
Sbjct: 147 PDKTFIFQNS 156


>sp|SYW_PYRAB|TRYPTOPHAN--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 PEKSILFQQS 10
P+K+ +FQ S
Sbjct: 147 PDKTFIFQNS 156




23|Sequence|111|120|LFQQSQVSEH

***** No hits found ******


24|Sequence|116|125|QVSEHTQLSW

>sp|RRP4_NITMS|EXOSOME complex component Rrp4|Nitrosopumilus maritimus (strain SCM1)

Query: 1 QVSEHTQLSW 10
+V+ HT LSW
Sbjct: 67 KVNSHTSLSW 76


>sp|CAPPA_METMA|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QVSEHTQLSW 10
+++E+T LSW
Sbjct: 173 ELAENTLLSW 182




25|Sequence|121|130|TQLSWILSCM

>sp|CS2H_SACS2|CARBON disulfide hydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 WILSCM 10
WIL+CM
Sbjct: 31 WILTCM 36


>sp|CS2H_ACIS1|CARBON disulfide hydrolase|Acidianus sp. (strain A1-3)

Query: 5 WILSCM 10
W+L+CM
Sbjct: 31 WVLTCM 36


>sp|AATI_PYRHO|A-TYPE ATP synthase subunit I|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 QLSWIL 7
QLSW+L
Sbjct: 494 QLSWLL 499


>sp|NNR_METHJ|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanospirillum hungatei JF-1

Query: 1 TQLSWILSC 9
TQL +LSC
Sbjct: 110 TQLQRLLSC 118


>sp|Y378_METTH|UPF0104 membrane protein MTH_378|Methanothermobacter thermautotrophicus

Query: 3 LSWILSCM 10
LSW++ C+
Sbjct: 225 LSWLMECL 232


>sp|Y1020_PYRFU|PUTATIVE phosphate permease PF1020|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LSWILS 8
LSWILS
Sbjct: 147 LSWILS 152


>sp|Y1401_PYRAB|PUTATIVE phosphate permease PYRAB14010|Pyrococcus abyssi (strain GE5 /

Query: 3 LSWILS 8
LSWILS
Sbjct: 141 LSWILS 146


>sp|Y2061_THEKO|PUTATIVE phosphate permease TK2061|Thermococcus kodakarensis (strain ATCC

Query: 3 LSWILS 8
LSWILS
Sbjct: 142 LSWILS 147




26|Sequence|126|135|ILSCMVRLPR

>sp|FEOB_METJA|FE(2+) transporter FeoB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILSCMVRLP 9
+LSC RLP
Sbjct: 426 LLSCSARLP 434


>sp|PIMT1_METAC|PROTEIN-L-ISOASPARTATE O-methyltransferase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 ILSCMVRLPR 10
+L M+R+PR
Sbjct: 62 VLKAMLRVPR 71


>sp|PIMT_METMA|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ILSCMVRLPR 10
+L M+R+PR
Sbjct: 51 VLQAMLRVPR 60


>sp|SRP19_METAR|SIGNAL recognition particle 19 kDa|Methanocella arvoryzae (strain DSM

Query: 2 LSCMVRLPR 10
+SC V+ PR
Sbjct: 28 MSCSVKTPR 36




27|Sequence|131|140|VRLPRLQHLH

>sp|ECFA_METMP|ENERGY-COUPLING factor transporter ATP-binding protein|Methanococcus maripaludis

Query: 1 VRLPRLQHL 9
+RLPR+ HL
Sbjct: 238 LRLPRVAHL 246


>sp|ECFA_METJA|ENERGY-COUPLING factor transporter ATP-binding protein|Methanocaldococcus

Query: 1 VRLPRLQHL 9
+RLPR+ HL
Sbjct: 238 LRLPRVAHL 246


>sp|Y583_METTM|PUTATIVE ABC transporter ATP-binding protein|Methanothermobacter

Query: 1 VRLPRLQHL 9
+RLPR+ HL
Sbjct: 238 LRLPRIAHL 246


>sp|Y133_METTH|PUTATIVE ABC transporter ATP-binding protein|Methanothermobacter

Query: 1 VRLPRLQHL 9
+RLPR+ HL
Sbjct: 240 LRLPRIAHL 248


>sp|Y1698_ARCFU|UPF0098 protein AF_1698|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VRLPRLQHLH 10
+RLP HLH
Sbjct: 87 LRLPAYLHLH 96


>sp|Y697_METVS|MEMO1 family protein Mevan_0697|Methanococcus vannielii (strain ATCC

Query: 1 VRLPRLQHL 9
V+LP L+HL
Sbjct: 140 VQLPFLKHL 148


>sp|Y632_METM7|MEMO1 family protein MmarC7_0632|Methanococcus maripaludis (strain C7 /

Query: 1 VRLPRLQHL 9
V+LP L+HL
Sbjct: 140 VQLPFLKHL 148


>sp|Y191_METM5|MEMO1 family protein MmarC5_0191|Methanococcus maripaludis (strain C5 /

Query: 1 VRLPRLQHL 9
V+LP L+HL
Sbjct: 140 VQLPFLKHL 148


>sp|Y1387_METMP|MEMO1 family protein MMP1387|Methanococcus maripaludis (strain DSM 14266

Query: 1 VRLPRLQHL 9
V+LP L+HL
Sbjct: 140 VQLPFLKHL 148


>sp|Y1286_METM6|MEMO1 family protein MmarC6_1286|Methanococcus maripaludis (strain C6 /

Query: 1 VRLPRLQHL 9
V+LP L+HL
Sbjct: 140 VQLPFLKHL 148


>sp|Y403_METJA|MEMO1 family protein MJ0403|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VRLPRLQHL 9
V+LP L+HL
Sbjct: 143 VQLPFLKHL 151


>sp|Y2180_SACI7|MEMO1 family protein YG5714_2180|Saccharolobus islandicus (strain

Query: 1 VRLPRLQHL 9
V+LP LQH
Sbjct: 142 VQLPFLQHF 150


>sp|Y1355_METJA|UNCHARACTERIZED protein MJ1355|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VRLPRLQHLH 10
+++PR +++H
Sbjct: 410 IKIPRKRYIH 419


>sp|Y1771_AERPE|MEMO1 family protein APE_1771|Aeropyrum pernix (strain ATCC 700893

Query: 1 VRLPRLQHLH 10
V+LP LQ+L+
Sbjct: 142 VQLPFLQYLY 151




28|Sequence|136|145|LQHLHQWKAK

>sp|FTSZ2_PYRHO|CELL division protein FtsZ 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 QHLHQWKA 9
QHLHQ KA
Sbjct: 70 QHLHQIKA 77


>sp|GLCD2_CALMQ|GLUCOSE 1-dehydrogenase 2|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 LQHLHQWK 8
L HL QWK
Sbjct: 317 LAHLAQWK 324


>sp|IF2P_STAMF|PROBABLE translation initiation factor IF-2|Staphylothermus marinus (strain

Query: 2 QHLHQWKAK 10
QH+H W K
Sbjct: 565 QHVHLWLTK 573


>sp|GLCD1_PICTO|GLUCOSE 1-dehydrogenase 1|Picrophilus torridus (strain ATCC 700027

Query: 1 LQHLHQWKAK 10
+ HL QWK +
Sbjct: 304 MNHLIQWKKQ 313


>sp|CARA_METS5|CARBAMOYL phosphate synthase small chain|Metallosphaera sedula (strain ATCC

Query: 2 QHLHQWKAK 10
+ LHQW A+
Sbjct: 108 KSLHQWMAE 116


>sp|PYRG_METKA|CTP synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 LQHLHQWKAK 10
L+H+H+ K K
Sbjct: 180 LEHVHELKTK 189


>sp|NASB_HALMT|PROBABLE nitrate transporter|Haloferax mediterranei (strain ATCC 33500

Query: 1 LQHLHQW 7
+QH+ QW
Sbjct: 119 IQHVSQW 125


>sp|RL10_METMA|LARGE ribosomal subunit protein uL10|Methanosarcina mazei (strain ATCC

Query: 2 QHLHQWK 8
+H+ QWK
Sbjct: 9 EHIPQWK 15


>sp|RL10_METBU|LARGE ribosomal subunit protein uL10|Methanococcoides burtonii (strain

Query: 2 QHLHQWK 8
+H+ QWK
Sbjct: 8 EHIPQWK 14


>sp|RL10_METAC|LARGE ribosomal subunit protein uL10|Methanosarcina acetivorans (strain

Query: 2 QHLHQWK 8
+H+ QWK
Sbjct: 9 EHIPQWK 15


>sp|GGR_THEVO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 QHLHQWKAK 10
+HL W AK
Sbjct: 338 KHLRNWVAK 346


>sp|GGR_THEAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 QHLHQWKAK 10
+HL W AK
Sbjct: 338 KHLRNWVAK 346


>sp|RL30_PYRNV|LARGE ribosomal subunit protein uL30|Pyrobaculum neutrophilum (strain

Query: 1 LQHLHQW 7
L+HL +W
Sbjct: 88 LEHLQRW 94


>sp|DPH2_PYRHO|2-(3-AMINO-3-CARBOXYPROPYL)HISTIDINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 QHLHQWK 8
QH+HQ K
Sbjct: 126 QHIHQLK 132


>sp|K6PF_PYRFU|ADP-SPECIFIC phosphofructokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 QHLHQW 7
+ LHQW
Sbjct: 79 EELHQW 84


>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QHLHQWKAK 10
Q+L +WK K
Sbjct: 297 QYLQKWKEK 305


>sp|FTSZ2_PYRAB|CELL division protein FtsZ 2|Pyrococcus abyssi (strain GE5 /

Query: 2 QHLHQWKA 9
QHLH KA
Sbjct: 70 QHLHYVKA 77


>sp|GGR_PICTO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Picrophilus torridus (strain ATCC 700027

Query: 2 QHLHQWKAK 10
+HL W AK
Sbjct: 339 KHLRNWFAK 347


>sp|RS5_METKA|SMALL ribosomal subunit protein uS5|Methanopyrus kandleri (strain AV19

Query: 3 HLHQWKAK 10
HL +W+ K
Sbjct: 6 HLEEWEPK 13


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 2 QHLHQWK 8
++LH WK
Sbjct: 208 KYLHYWK 214


>sp|KPTA_HYPBU|PROBABLE RNA 2'-phosphotransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 QHLHQW 7
+HL+QW
Sbjct: 77 RHLYQW 82




29|Sequence|141|150|QWKAKTTKQK

***** No hits found ******


30|Sequence|146|155|TTKQKHDGTV

>sp|SYE_HALSA|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 TTKQKHDGT 9
T KQ++DG+
Sbjct: 133 TYKQRYDGS 141


>sp|SYE_HALS3|GLUTAMATE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 TTKQKHDGT 9
T KQ++DG+
Sbjct: 133 TYKQRYDGS 141


>sp|PUR7_CENSY|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Cenarchaeum symbiosum (strain A)

Query: 1 TTKQKHD 7
TTK +HD
Sbjct: 124 TTKSEHD 130




31|Sequence|151|160|HDGTVGLLTY

>sp|NFI_THEAC|BIFUNCTIONAL methyltransferase/endonuclease|Thermoplasma acidophilum (strain

Query: 1 HDGTVGLLTY 10
HDGTVG T+
Sbjct: 72 HDGTVGNYTH 81


>sp|Y920_METJA|UNCHARACTERIZED protein MJ0920|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DGTVGLL 8
DG+VGLL
Sbjct: 107 DGSVGLL 113


>sp|RL24_METHJ|LARGE ribosomal subunit protein uL24|Methanospirillum hungatei JF-1

Query: 1 HDGTVGLLTY 10
H GT GL+ Y
Sbjct: 60 HAGTEGLVDY 69


>sp|NFI_THEVO|BIFUNCTIONAL methyltransferase/endonuclease|Thermoplasma volcanium (strain

Query: 1 HDGTVGLLTY 10
HDG+VG T+
Sbjct: 67 HDGSVGNYTH 76


>sp|SPH1_HALSI|SMC-LIKE protein Sph1|Halobacterium salinarum (Halobacterium halobium)

Query: 3 GTVGLLT 9
GT GLLT
Sbjct: 46 GTTGLLT 52


>sp|SPH1_HALSA|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 700922

Query: 3 GTVGLLT 9
GT GLLT
Sbjct: 46 GTTGLLT 52


>sp|SPH1_HALS3|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 29341

Query: 3 GTVGLLT 9
GT GLLT
Sbjct: 46 GTTGLLT 52


>sp|RF1_METBU|PEPTIDE chain release factor subunit|Methanococcoides burtonii (strain DSM

Query: 2 DGTVGLLT 9
+ TVGLLT
Sbjct: 149 EATVGLLT 156


>sp|PGK_HALLT|PHOSPHOGLYCERATE kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 DGTVGLL 8
DGTVG+L
Sbjct: 338 DGTVGVL 344


>sp|NADK_ARCFU|NAD kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GTVGLLTY 10
G VGLLT+
Sbjct: 71 GRVGLLTH 78


>sp|IDH_HALVD|ISOCITRATE dehydrogenase [NADP]|Haloferax volcanii (strain ATCC 29605

Query: 1 HDGTVGL 7
HDG VG+
Sbjct: 188 HDGPVGI 194


>sp|PSTB2_NATPD|PHOSPHATE import ATP-binding protein PstB|Natronomonas pharaonis (strain

Query: 2 DGTVGL 7
DGT+GL
Sbjct: 89 DGTIGL 94


>sp|DPM1L_HALVD|DOLICHYL-PHOSPHATE hexose transferase HVO_1613|Haloferax volcanii (strain ATCC 29605

Query: 1 HDGTVGLLTY 10
HD T G+ Y
Sbjct: 148 HDTTTGMRAY 157


>sp|GLYA_NITMS|SERINE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 HDGTVGLL 8
H GT GL+
Sbjct: 132 HSGTAGLV 139


>sp|Y2294_THEKO|UPF0128 protein TK2294|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HDGTVGLLT 9
H G+VGL T
Sbjct: 129 HVGSVGLTT 137




32|Sequence|156|165|GLLTYPVLQA

>sp|Y326_METJA|PUTATIVE permease MJ0326|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLLTYPVLQ 9
G +TYP+L+
Sbjct: 399 GFITYPILK 407


>sp|SYW_SACS2|TRYPTOPHAN--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GLLTYPVLQ 9
GL+ YP LQ
Sbjct: 190 GLIFYPALQ 198


>sp|SYW_THEON|TRYPTOPHAN--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 GLLTYPVLQA 10
G++ YP +QA
Sbjct: 189 GMIFYPAIQA 198


>sp|SYW_THEKO|TRYPTOPHAN--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GLLTYPVLQA 10
G++ YP +QA
Sbjct: 189 GMIFYPAIQA 198


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LTYPVLQ 9
+TYP+LQ
Sbjct: 636 VTYPILQ 642


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 3 LTYPVLQ 9
+TYP+LQ
Sbjct: 641 VTYPILQ 647


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 5 YPVLQA 10
YPVLQA
Sbjct: 3539 YPVLQA 3544


Query: 5 YPVLQA 10
YPVLQA
Sbjct: 4939 YPVLQA 4944


Query: 5 YPVLQA 10
YPVLQA
Sbjct: 5934 YPVLQA 5939


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LTYPVLQ 9
+TYP+LQ
Sbjct: 1008 VTYPILQ 1014


>sp|SYW_PYRAE|TRYPTOPHAN--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GLLTYPVLQ 9
GL+ YP LQ
Sbjct: 190 GLIFYPSLQ 198


>sp|SYW_PYRAR|TRYPTOPHAN--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GLLTYPVLQ 9
GL+ YP LQ
Sbjct: 190 GLIFYPSLQ 198


>sp|FEN_THEGJ|FLAP endonuclease 1|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GLLTYPVLQA 10
GL+ PV+QA
Sbjct: 140 GLMGVPVVQA 149


>sp|SYW_PYRCJ|TRYPTOPHAN--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GLLTYPVLQ 9
GL+ YP LQ
Sbjct: 190 GLIFYPSLQ 198


>sp|SPEB_METJA|AGMATINASE jannaschii (strain ATCC 43067

Query: 3 LTYPVLQA 10
+TYP+++A
Sbjct: 112 ITYPIIKA 119


>sp|SYY_METBU|TYROSINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 LTYPVLQA 10
+ YP++QA
Sbjct: 153 MVYPIMQA 160


>sp|END4_METPE|PROBABLE endonuclease 4|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GLLTYPVLQA 10
G+LT+P L +
Sbjct: 247 GILTHPTLAS 256


>sp|RS2_METB6|SMALL ribosomal subunit protein uS2|Methanoregula boonei (strain DSM

Query: 1 GLLTYPVL 8
GLLT PVL
Sbjct: 108 GLLTNPVL 115


>sp|PURP_IGNH4|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GLLTYPV 7
GLL YPV
Sbjct: 100 GLLDYPV 106


>sp|SAHH_SULTO|ADENOSYLHOMOCYSTEINASE tokodaii (strain DSM 16993

Query: 1 GLLTYPVL 8
G+L YPV+
Sbjct: 162 GVLRYPVI 169


>sp|IORB_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorB|Thermococcus kodakarensis (strain ATCC

Query: 1 GLLTYPVL 8
GL TYP L
Sbjct: 108 GLATYPTL 115




33|Sequence|161|170|PVLQAADILL

>sp|SYW_METKA|TRYPTOPHAN--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 PVLQAADIL 9
P++QAADIL
Sbjct: 186 PIVQAADIL 194


>sp|SYW_THEVO|TRYPTOPHAN--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PVLQAADIL 9
P++QAAD+L
Sbjct: 176 PLIQAADVL 184


>sp|SYW_THEAC|TRYPTOPHAN--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PVLQAADIL 9
P++QAAD+L
Sbjct: 176 PLIQAADVL 184


>sp|SYW_METJA|TRYPTOPHAN--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PVLQAADIL 9
P++Q ADIL
Sbjct: 187 PIVQVADIL 195


>sp|Y872_METJA|UNCHARACTERIZED lipoprotein MJ0872|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PVLQAADIL 9
P++ AADIL
Sbjct: 112 PIISAADIL 120


>sp|SYW_METTH|TRYPTOPHAN--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PVLQAADIL 9
P++Q +DIL
Sbjct: 184 PIIQVSDIL 192


>sp|TRPA_METMP|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain DSM 14266

Query: 1 PVLQAADI 8
P +QAAD+
Sbjct: 48 PTIQAADV 55


>sp|TRPA_METM7|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C7 /

Query: 1 PVLQAADI 8
P +QAAD+
Sbjct: 48 PTIQAADV 55


>sp|TRPA_METM6|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C6 /

Query: 1 PVLQAADI 8
P +QAAD+
Sbjct: 48 PTIQAADV 55


>sp|TRPA_METM5|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C5 /

Query: 1 PVLQAADI 8
P +QAAD+
Sbjct: 48 PTIQAADV 55


>sp|AMPPA_NATPD|AMP phosphorylase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PVLQAADIL 9
PVL+A D+L
Sbjct: 328 PVLEARDVL 336


>sp|SYY_METHJ|TYROSINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PVLQAADILL 10
P++Q ADI +
Sbjct: 153 PIMQMADIAM 162




34|Sequence|166|175|ADILLYKSTH

>sp|CCA_AERPE|CCA-ADDING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 2 DILLYKS 8
DILL+KS
Sbjct: 166 DILLFKS 172


>sp|Y780_METJA|UNCHARACTERIZED protein MJ0780|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DILLYK 7
DILLYK
Sbjct: 13 DILLYK 18


>sp|IF2P_PYRAE|PROBABLE translation initiation factor IF-2|Pyrobaculum aerophilum (strain

Query: 1 ADILLYKST 9
AD++LY T
Sbjct: 252 ADVILYDGT 260


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ADILLYKSTH 10
ADI+++ TH
Sbjct: 522 ADIIIHVGTH 531




35|Sequence|171|180|YKSTHVPVGE

>sp|AMPPA_METLZ|AMP phosphorylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 KSTHVPVGE 10
KST PVGE
Sbjct: 405 KSTDFPVGE 413


>sp|Y903_METJA|UNCHARACTERIZED protein MJ0903|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YKSTHVPVGE 10
+K+ ++P+GE
Sbjct: 191 FKTVYIPLGE 200


>sp|MCRZ_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 YKSTHVPVGE 10
YKS H P+ E
Sbjct: 52 YKSVHPPLDE 61


>sp|MCRZ_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 YKSTHVPVGE 10
YKS H P+ E
Sbjct: 52 YKSVHPPLDE 61


>sp|GLCAE_SULTO|D-GLUCOSAMINE-6-PHOSPHATE 4-epimerase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YKSTHVPVGE 10
Y ST +P+ E
Sbjct: 181 YSSTFLPIAE 190




36|Sequence|176|185|VPVGEDQVQH

>sp|PRIL_THEKO|DNA primase large subunit PriL|Thermococcus kodakarensis (strain ATCC

Query: 1 VPVGEDQVQH 10
VPVGE+++ H
Sbjct: 113 VPVGENEIPH 122


>sp|SYW_HYPBU|TRYPTOPHAN--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 VPVGEDQVQH 10
VPVG DQ H
Sbjct: 213 VPVGADQDPH 222


>sp|SYW_AERPE|TRYPTOPHAN--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VPVGEDQVQH 10
VPVG DQ H
Sbjct: 212 VPVGADQDPH 221


>sp|SYW_METTH|TRYPTOPHAN--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VPVGEDQVQH 10
VPVG DQ H
Sbjct: 207 VPVGPDQDPH 216


>sp|SYW_ARCFU|TRYPTOPHAN--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VPVGEDQVQH 10
VPVG DQ H
Sbjct: 205 VPVGADQDPH 214


>sp|SYW_METMA|TRYPTOPHAN--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VPVGEDQVQH 10
VPVG DQ H
Sbjct: 208 VPVGPDQDPH 217


>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 VPVGEDQV 8
+P+GE+Q+
Sbjct: 318 IPIGEEQI 325


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 1 VPVGEDQ 7
+PVG+DQ
Sbjct: 16 IPVGDDQ 22


>sp|SYS_METHJ|SERINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VPVGEDQVQH 10
VPVG D Q+
Sbjct: 114 VPVGADDTQN 123


>sp|SYW1_HALSA|TRYPTOPHAN--TRNA ligase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 VPVGEDQVQH 10
+PVG DQ H
Sbjct: 217 IPVGPDQDPH 226


>sp|Y2269_METMJ|UPF0210 protein Memar_2269|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VPVGEDQ 7
+PV EDQ
Sbjct: 335 IPVSEDQ 341


>sp|Y1030_METLZ|UPF0210 protein Mlab_1030|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 VPVGEDQ 7
+PV EDQ
Sbjct: 335 IPVSEDQ 341


>sp|SYT_CENSY|THREONINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 VPVGEDQVQH 10
+PVGE+ V++
Sbjct: 506 IPVGEELVRN 515


>sp|Y1520_METJA|UNCHARACTERIZED protein MJ1520|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VPVGEDQVQ 9
+P+G+D+V+
Sbjct: 201 IPMGKDRVR 209


>sp|ARGC_METMJ|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PVGEDQVQ 9
P+G+D+V+
Sbjct: 241 PMGQDEVE 248


>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 1 VPVGEDQV 8
+PVGE+ V
Sbjct: 482 IPVGEEPV 489


>sp|Y2657_METHJ|UPF0210 protein Mhun_2657|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VPVGEDQ 7
+PV EDQ
Sbjct: 335 IPVSEDQ 341


>sp|SYS_THEGJ|SERINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VPVGEDQVQH 10
VPVG+D ++
Sbjct: 114 VPVGKDDTEN 123


>sp|SYS_PYRFU|SERINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VPVGEDQ 7
VPVG+D+
Sbjct: 114 VPVGKDE 120


>sp|PIMT_HYPBU|PROTEIN-L-ISOASPARTATE O-methyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 VPVGEDQVQH 10
+P+G+ +QH
Sbjct: 191 IPIGDRYLQH 200


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 PVGEDQVQ 9
P GED +Q
Sbjct: 199 PEGEDDIQ 206


>sp|DUT_HALSA|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Halobacterium

Query: 2 PVGEDQVQ 9
PV +DQ+Q
Sbjct: 14 PVADDQIQ 21


>sp|DUT_HALS3|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Halobacterium

Query: 2 PVGEDQVQ 9
PV +DQ+Q
Sbjct: 14 PVADDQIQ 21


>sp|SYS_METAR|SERINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 VPVGEDQVQH 10
VPVG+D ++
Sbjct: 114 VPVGKDDTEN 123


>sp|SYS_PYRHO|SERINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VPVGEDQ 7
VPVG+D+
Sbjct: 114 VPVGKDE 120


>sp|RL18_STAMF|LARGE ribosomal subunit protein uL18|Staphylothermus marinus (strain ATCC

Query: 1 VPVGEDQV 8
VPVGE+ V
Sbjct: 131 VPVGEEVV 138


>sp|SYS_THESM|SERINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 VPVGEDQVQH 10
VP+G+D ++
Sbjct: 114 VPIGKDDTEN 123




37|Sequence|181|190|DQVQHMELVQ

>sp|COFH_METHJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanospirillum hungatei JF-1 (strain

Query: 1 DQVQHMELVQ 10
DQV+H+ +++
Sbjct: 230 DQVRHLSILR 239


>sp|CFBD_METAC|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina acetivorans

Query: 1 DQVQHMELV 9
+ +QHMEL+
Sbjct: 310 ENLQHMELI 318




38|Sequence|186|195|MELVQDLAQG

>sp|RL7A_METBF|LARGE ribosomal subunit protein eL8|Methanosarcina barkeri (strain Fusaro

Query: 2 ELVQDLAQ 9
E+VQD+AQ
Sbjct: 107 EMVQDIAQ 114


>sp|RL7A_METAC|LARGE ribosomal subunit protein eL8|Methanosarcina acetivorans (strain

Query: 2 ELVQDLAQ 9
E+VQD+AQ
Sbjct: 107 EMVQDIAQ 114


>sp|DPCKG_PYRAE|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 MELVQDLAQ 9
ME+V+D+A+
Sbjct: 1 MEVVKDIAE 9


>sp|RGYRA_METKA|REVERSE gyrase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 1 MELVQDLAQG 10
M+L QDL +G
Sbjct: 64 MQLAQDLFEG 73


>sp|RL7A_METMA|LARGE ribosomal subunit protein eL8|Methanosarcina mazei (strain ATCC

Query: 2 ELVQDLAQ 9
E++QD+AQ
Sbjct: 107 EMIQDIAQ 114


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 MELVQDLAQG 10
+E+V+DLA G
Sbjct: 906 VEIVEDLAGG 915


>sp|SYFB_METBF|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 ELVQDLAQG 10
+LV+D+A+G
Sbjct: 330 DLVEDIAKG 338


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 1 MELVQDLAQG 10
+ELV+D +G
Sbjct: 76 LELVEDFVEG 85


>sp|SYFB_METAC|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ELVQDLAQG 10
+LV+D+A+G
Sbjct: 330 DLVEDIAKG 338


>sp|SYFB_METMA|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ELVQDLAQG 10
+LV+D+A+G
Sbjct: 330 DLVEDIAKG 338


>sp|MTXH_METBF|PUTATIVE methyltransferase mtx subunit H|Methanosarcina barkeri (strain

Query: 2 ELVQDLAQG 10
E+V+D+A+G
Sbjct: 39 EIVKDVARG 47


>sp|RS3_METB6|SMALL ribosomal subunit protein uS3|Methanoregula boonei (strain DSM

Query: 2 ELVQDLAQ 9
+L QDLAQ
Sbjct: 64 QLTQDLAQ 71


>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 ELVQDLAQG 10
ELV+ LA+G
Sbjct: 563 ELVEKLAEG 571




39|Sequence|191|200|DLAQGFNKKY

>sp|SYR_METM6|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 DLAQGFNKKY 10
D+AQGFNK Y
Sbjct: 514 DVAQGFNKFY 523


>sp|SYR_METM5|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 DLAQGFNKKY 10
D+AQGFNK Y
Sbjct: 514 DVAQGFNKFY 523


>sp|SYR_METMP|ARGININE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DLAQGFNKKY 10
D+AQGFNK Y
Sbjct: 514 DVAQGFNKFY 523


>sp|SYR_METM7|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 DLAQGFNKKY 10
D+AQGFNK Y
Sbjct: 514 DVAQGFNKFY 523


>sp|SYR_METVS|ARGININE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 DLAQGFNKKY 10
+LAQGFNK Y
Sbjct: 517 ELAQGFNKFY 526


>sp|TRPF_SULAC|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DLAQGFNKKY 10
DLA+G+ K+Y
Sbjct: 134 DLARGWAKEY 143


>sp|SYR_META3|ARGININE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DLAQGFNKKY 10
D+AQ FN+ Y
Sbjct: 522 DVAQTFNRYY 531


>sp|SYR_METS3|ARGININE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DLAQGFNKKY 10
DLA FNK Y
Sbjct: 526 DLAGAFNKFY 535


>sp|GSA_IGNH4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 LAQGFNKK 9
LA+GF KK
Sbjct: 123 LARGFTKK 130


>sp|MTQ2_ARCFU|RELEASE factor glutamine methyltransferase Mtq2|Archaeoglobus fulgidus

Query: 1 DLAQGFNKKY 10
D+A+G KK+
Sbjct: 71 DIAKGIRKKF 80


>sp|MCH_METB6|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanoregula boonei (strain DSM 21154

Query: 1 DLAQGFNKKY 10
DLA+ FN Y
Sbjct: 17 DLAEEFNAVY 26




40|Sequence|196|205|FNKKYGEFFP

>sp|QUEC_PYRHO|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FNKKYGEFFP 10
FNK+ GE FP
Sbjct: 132 FNKEEGETFP 141


>sp|QUEC_PYRAB|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 FNKKYGEFFP 10
FNK+ GE FP
Sbjct: 132 FNKEEGETFP 141


>sp|AGOG_PYRFU|N-GLYCOSYLASE/DNA lyase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KKYGEFFP 10
K YGEF P
Sbjct: 81 KAYGEFLP 88


>sp|HEMTB_METJA|BACTERIOHEMERYTHRIN jannaschii (strain ATCC 43067

Query: 2 NKKYGEFF 9
+KKYGE+F
Sbjct: 125 DKKYGEWF 132


>sp|FAU1_PYRAE|PROBABLE ribonuclease FAU-1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 KKYGEFFP 10
+KY E+FP
Sbjct: 411 EKYKEYFP 418


>sp|FAU1_PYRAR|PROBABLE ribonuclease FAU-1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 KKYGEFFP 10
+KY E FP
Sbjct: 411 EKYAEMFP 418


>sp|SYM_HALMA|METHIONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 FNKKYGEFFP 10
F++ Y E FP
Sbjct: 81 FHETYAETFP 90


>sp|Y856_PYRHO|UNCHARACTERIZED protein PH0856|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KKYGEF 8
KKYGEF
Sbjct: 56 KKYGEF 61


>sp|Y1662_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 FNKKYGEF 8
KKYG+F
Sbjct: 9 LTKKYGDF 16


>sp|Y1094_HALWD|PUTATIVE heme-binding protein HQ_1094A|Haloquadratum walsbyi (strain DSM

Query: 2 NKKYGEFFP 10
NK Y F+P
Sbjct: 143 NKDYAGFYP 151


>sp|AATC_METBF|A-TYPE ATP synthase subunit C|Methanosarcina barkeri (strain Fusaro /

Query: 4 KYGEFFP 10
KY E++P
Sbjct: 170 KYSEYYP 176


>sp|RNH2_PYRHO|RIBONUCLEASE HII|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FNKKYGEFFP 10
+ K+YG+F P
Sbjct: 183 YYKQYGDFPP 192


Query: 1 FNKKYGEF 8
+KYGEF
Sbjct: 159 LKQKYGEF 166


>sp|AROE_METJA|SHIKIMATE dehydrogenase (NADP(+))|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FNKKYGE 7
NKK+GE
Sbjct: 169 LNKKFGE 175


>sp|APGM_METVS|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus vannielii (strain ATCC 35089

Query: 1 FNKKYG 6
F+KKYG
Sbjct: 232 FDKKYG 237


>sp|IF1A_THEAC|TRANSLATION initiation factor 1A|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 NKKYGEFF 9
NKK GE F
Sbjct: 30 NKKKGEMF 37


>sp|Y2340_ARCFU|UNCHARACTERIZED protein AF_2340|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FNKKYGEF 8
FN ++GEF
Sbjct: 470 FNAEHGEF 477


>sp|IF1A_THEVO|TRANSLATION initiation factor 1A|Thermoplasma volcanium (strain ATCC 51530

Query: 2 NKKYGEFF 9
NKK GE F
Sbjct: 34 NKKKGEMF 41


>sp|Y756_METJA|UNCHARACTERIZED protein MJ0756|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FNKKYGEFFP 10
FN +GE +P
Sbjct: 86 FNTPFGEKYP 95


>sp|Y811_SULTO|RUTC family protein STK_08110|Sulfurisphaera tokodaii (strain DSM

Query: 1 FNKKYGEFF 9
FN Y E+F
Sbjct: 87 FNSVYAEYF 95


>sp|CAS1D_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 4|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 FNKKYGEFFP 10
F K +G F P
Sbjct: 97 FGKYFGSFVP 106


>sp|GGGPS_METAR|GERANYLGERANYLGLYCERYL phosphate synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 FNKKYGEF 8
FN KY +F
Sbjct: 87 FNTKYSKF 94


>sp|Y379_THEGJ|UPF0282 protein TGAM_0379|Thermococcus gammatolerans (strain DSM 15229

Query: 2 NKKYGEFF 9
+K+Y EFF
Sbjct: 249 DKRYPEFF 256


>sp|Y1681_THEKO|UPF0282 protein TK1681|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 NKKYGEFF 9
+K+Y EFF
Sbjct: 249 DKRYPEFF 256




41|Sequence|201|210|GEFFPVPESI

>sp|BIOD_NITMS|ATP-DEPENDENT dethiobiotin synthetase BioD|Nitrosopumilus maritimus (strain

Query: 2 EFFPVPES 9
+FFP+P S
Sbjct: 73 QFFPIPAS 80


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 GEFFPVPESI 10
G F P+PE +
Sbjct: 359 GVFLPIPEKV 368


>sp|AGOG_METMP|N-GLYCOSYLASE/DNA lyase|Methanococcus maripaludis (strain DSM 14266

Query: 2 EFFPVPESI 10
EFFP P +I
Sbjct: 172 EFFPYPMNI 180


>sp|GLPK_THEKO|GLYCEROL kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 EFFPVPESI 10
E F +PES+
Sbjct: 200 ELFDIPESV 208


>sp|IF2G_METM7|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C7 /

Query: 2 EFFPVPE 8
EF P PE
Sbjct: 197 EFIPTPE 203


>sp|IF2G_METM5|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C5 /

Query: 2 EFFPVPE 8
EF P PE
Sbjct: 197 EFIPTPE 203


>sp|ALAXS_PYRHO|ALANYL-TRNA editing protein AlaX-S|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EFFPVPESI 10
+ FPVPE +
Sbjct: 92 DLFPVPEDV 100


>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EFFPVPE 8
E+FPVP+
Sbjct: 21 EWFPVPK 27


>sp|NIFD_METTM|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 1 GEFFPVPE 8
GE+F +PE
Sbjct: 303 GEYFGIPE 310


>sp|NIFD_METTH|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 1 GEFFPVPE 8
GE+F +PE
Sbjct: 303 GEYFGIPE 310


>sp|HEMH_THEAC|FERROCHELATASE acidophilum (strain ATCC 25905

Query: 5 PVPESI 10
PVPES+
Sbjct: 31 PVPESV 36


>sp|HISX_METJA|HISTIDINOL dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GEFFPVP 7
GE+ PVP
Sbjct: 352 GEYSPVP 358




42|Sequence|206|215|VPESILTSMK

>sp|GLPK_SACI6|GLYCEROL kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VPESILTSMK 10
+PESIL +K
Sbjct: 209 IPESILPEVK 218


>sp|GLPK_SACI4|GLYCEROL kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VPESILTSMK 10
+PESIL +K
Sbjct: 209 IPESILPEVK 218


>sp|GLPK_SACI7|GLYCEROL kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VPESILTSMK 10
+PESIL +K
Sbjct: 209 IPESILPEVK 218


>sp|GLPK_SACI2|GLYCEROL kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VPESILTSMK 10
+PESIL +K
Sbjct: 209 IPESILPEVK 218


>sp|GLPK1_SACS2|GLYCEROL kinase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VPESILTSMK 10
+PESIL +K
Sbjct: 209 IPESILPEVK 218


>sp|GLPK_SACI3|GLYCEROL kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 VPESILTSMK 10
+PESIL +K
Sbjct: 209 IPESILPEVK 218


>sp|TRPG1_HALMA|ANTHRANILATE synthase component II|Haloarcula marismortui (strain ATCC 43049

Query: 2 PESILTSM 9
PES+LT++
Sbjct: 188 PESVLTAV 195


>sp|EF2_METS5|ELONGATION factor 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 VPESILTSM 9
VP+SILT +
Sbjct: 706 VPDSILTDV 714


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 3 ESILTSM 9
ES+LTSM
Sbjct: 678 ESVLTSM 684


>sp|GLCD2_SACS2|GLUCOSE 1-dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 ESILTSMK 10
ESILTS K
Sbjct: 162 ESILTSQK 169


>sp|FLAH_METJA|ARCHAEAL flagellar ATP-binding protein FlaH|Methanocaldococcus jannaschii

Query: 1 VPESILTSMK 10
+PES+LT ++
Sbjct: 168 LPESVLTIIR 177




43|Sequence|211|220|LTSMKKVKSL

>sp|GGR_SULAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 SMKKVKSL 10
SMKK+K L
Sbjct: 415 SMKKIKEL 422


>sp|Y034_PYRHO|UPF0284 protein PH0034|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 MKKVKSL 10
MKKVKSL
Sbjct: 1 MKKVKSL 7




44|Sequence|216|225|KVKSLRDPSA

>sp|Y760_METJA|UNCHARACTERIZED protein MJ0760|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KVKSLRDPS 9
KVK LR PS
Sbjct: 9 KVKGLRSPS 17


>sp|APE1_SACS2|PROBABLE aminopeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VKSLRDPS 9
+ SLRDPS
Sbjct: 664 ISSLRDPS 671


>sp|HIS4_ARCFU|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Archaeoglobus fulgidus (strain

Query: 2 VKSLRDP 8
VKSLR+P
Sbjct: 184 VKSLRNP 190


>sp|HOSA_PYRAB|HOMOCITRATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 KVKSLRDP 8
KVKS R+P
Sbjct: 339 KVKSSREP 346


>sp|ASPD_METMP|L-ASPARTATE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KVKSLRDPSA 10
KVK + DP+A
Sbjct: 204 KVKIIADPNA 213


>sp|ASPD_METM6|L-ASPARTATE dehydrogenase|Methanococcus maripaludis (strain C6 /

Query: 1 KVKSLRDPSA 10
KVK + DP+A
Sbjct: 204 KVKIIADPNA 213


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KVKSLRDP 8
K+K L DP
Sbjct: 113 KIKELEDP 120




45|Sequence|221|230|RDPSAKMSKS

>sp|MTXX_METBF|PUTATIVE methyltransferase mtx subunit X|Methanosarcina barkeri (strain

Query: 1 RDPSAKMSKS 10
RDP++KM +S
Sbjct: 15 RDPNSKMLES 24


>sp|Y2077_ARCFU|UNCHARACTERIZED protein AF_2077|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DPSAKMSK 9
DP+ +MSK
Sbjct: 137 DPAVRMSK 144




46|Sequence|226|235|KMSKSDPDKL

>sp|SYY_THEAC|TYROSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KMSKSDPD 8
KMSKSDP+
Sbjct: 219 KMSKSDPN 226


>sp|SYY_THEVO|TYROSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KMSKSDPD 8
KMSKSDP+
Sbjct: 218 KMSKSDPN 225


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 MSKSDPDKL 10
M K DPDKL
Sbjct: 741 MEKEDPDKL 749


>sp|SYY_PICTO|TYROSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 KMSKSDPD 8
KMSKS+PD
Sbjct: 220 KMSKSEPD 227


>sp|CREN1_PYRCJ|CRENACTIN calidifontis (strain DSM 21063

Query: 1 KMSKSDPDKL 10
+ +KSDPD+
Sbjct: 253 RAAKSDPDRF 262


>sp|HTPX1_SULTO|PROTEASE HtpX homolog 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KMSKSDPDKL 10
K+ +SDPD L
Sbjct: 264 KVKESDPDLL 273


>sp|DNAK_METTP|CHAPERONE protein DnaK|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 KMSKSDPDKL 10
K+SKSD DK+
Sbjct: 303 KLSKSDIDKI 312


>sp|THIC_PYRFU|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KMSKSDPDKL 10
K+ K DP+KL
Sbjct: 21 KIEKIDPEKL 30


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 KMSKSDPDKL 10
K+S+ +PD +
Sbjct: 832 KLSREEPDSI 841


>sp|GGGPS_METLZ|GERANYLGERANYLGLYCERYL phosphate synthase|Methanocorpusculum labreanum (strain ATCC

Query: 2 MSKSDPDKL 10
++K DPDK+
Sbjct: 9 ITKLDPDKV 17


>sp|RS10_METS3|SMALL ribosomal subunit protein uS10|Methanobrevibacter smithii (strain

Query: 1 KMSKSDPDKL 10
K++ +DP+KL
Sbjct: 7 KLTGTDPEKL 16


>sp|RS10_METTH|SMALL ribosomal subunit protein uS10|Methanothermobacter

Query: 1 KMSKSDPDKL 10
K++ +DP+KL
Sbjct: 7 KLTGTDPEKL 16


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 MSKSDPDKL 10
+ + DPDKL
Sbjct: 729 IERDDPDKL 737


>sp|SYW_PYRAR|TRYPTOPHAN--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 KMSKSDPD 8
KMS S+PD
Sbjct: 258 KMSASNPD 265


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 MSKSDPDKL 10
+ + DPDKL
Sbjct: 729 IERDDPDKL 737


>sp|RTCB_AERPE|TRNA-SPLICING ligase RtcB|Aeropyrum pernix (strain ATCC 700893

Query: 1 KMSKSDPDKL 10
K+ DPDKL
Sbjct: 311 KVFHQDPDKL 320


>sp|SYW_PYRAE|TRYPTOPHAN--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KMSKSDPD 8
KMS S+PD
Sbjct: 258 KMSASNPD 265


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 2 MSKSDPDKL 10
M+ DPDK+
Sbjct: 347 MTDEDPDKI 355


>sp|SYW_THEVO|TRYPTOPHAN--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KMSKSDPDKL 10
KMS S PD L
Sbjct: 314 KMSSSVPDSL 323


>sp|KDGK_SULTO|2-DEHYDRO-3-DEOXYGLUCONOKINASE tokodaii (strain DSM 16993

Query: 2 MSKSDPDK 9
+ +SDPDK
Sbjct: 202 LGESDPDK 209


>sp|SYW_THEAC|TRYPTOPHAN--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KMSKSDPDKL 10
KMS S PD L
Sbjct: 314 KMSSSVPDSL 323




47|Sequence|231|240|DPDKLATVRI

>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DPDKLATVRI 10
DPDKLA R+
Sbjct: 788 DPDKLAAYRV 797


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DPDKLATVRI 10
DPDKLA R+
Sbjct: 740 DPDKLAAYRV 749


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DPDKLATVRI 10
+PDKLA R+
Sbjct: 740 NPDKLAVYRV 749


>sp|MPTA_KORCO|GTP cyclohydrolase MptA|Korarchaeum cryptofilum (strain OPF8)

Query: 1 DPDKLATV 8
DPDKLA++
Sbjct: 183 DPDKLASI 190


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 DPDKLATVRI 10
DP+K TVR+
Sbjct: 13 DPEKYYTVRL 22


>sp|DACZ_HALVD|DIADENYLATE cyclase|Haloferax volcanii (strain ATCC 29605

Query: 1 DPDKLATVRI 10
DPD L VR+
Sbjct: 95 DPDSLVRVRV 104


>sp|TRPA_METB6|TRYPTOPHAN synthase alpha chain|Methanoregula boonei (strain DSM 21154

Query: 1 DPDKLATVRI 10
DPDK ++RI
Sbjct: 25 DPDKETSIRI 34


>sp|Z0758_HALVD|ZINC finger mu-protein HVO_0758|Haloferax volcanii (strain ATCC 29605

Query: 1 DPDKLATVRI 10
DPD++ +VRI
Sbjct: 35 DPDEVFSVRI 44


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DPDKLA 6
DPDKLA
Sbjct: 767 DPDKLA 772


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DPDKLA 6
DPDKLA
Sbjct: 767 DPDKLA 772


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DPDKLA 6
DPDKLA
Sbjct: 767 DPDKLA 772


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 DPDKLA 6
DPDKLA
Sbjct: 767 DPDKLA 772


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DPDKLA 6
DPDKLA
Sbjct: 740 DPDKLA 745


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DPDKLA 6
DPDKLA
Sbjct: 740 DPDKLA 745


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DPDKLA 6
DPDKLA
Sbjct: 738 DPDKLA 743


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DPDKLA 6
DPDKLA
Sbjct: 733 DPDKLA 738


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 DPDKLA 6
DPDKLA
Sbjct: 733 DPDKLA 738


>sp|SUCC_STAMF|SUCCINATE--COA ligase [ADP-forming] subunit beta|Staphylothermus marinus (strain

Query: 2 PDKLATVRI 10
PDKL +R+
Sbjct: 133 PDKLLRIRV 141


>sp|RL40_PYRAE|LARGE ribosomal subunit protein eL40|Pyrobaculum aerophilum (strain

Query: 1 DPDKLATV 8
DP+KLA V
Sbjct: 6 DPEKLAIV 13


>sp|RL40_PYRNV|LARGE ribosomal subunit protein eL40|Pyrobaculum neutrophilum (strain

Query: 1 DPDKLATV 8
DP+KLA V
Sbjct: 6 DPEKLAIV 13


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DPDKLA 6
DPDK+A
Sbjct: 739 DPDKIA 744


>sp|GLNK1_HALMT|NITROGEN regulatory protein GlnK1|Haloferax mediterranei (strain ATCC

Query: 2 PDKLATVR 9
PDKLA V+
Sbjct: 20 PDKLADVK 27


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DPDKLA 6
DPDK+A
Sbjct: 737 DPDKIA 742


>sp|RS10_METS3|SMALL ribosomal subunit protein uS10|Methanobrevibacter smithii (strain

Query: 1 DPDKLATV 8
DP+KLA V
Sbjct: 12 DPEKLAYV 19


>sp|RS10_METTH|SMALL ribosomal subunit protein uS10|Methanothermobacter

Query: 1 DPDKLATV 8
DP+KLA V
Sbjct: 12 DPEKLAYV 19


>sp|GLNK2_HALMT|NITROGEN regulatory protein GlnK2|Haloferax mediterranei (strain ATCC

Query: 2 PDKLATVR 9
PDKLA V+
Sbjct: 21 PDKLADVK 28


>sp|BIOW_METVM|6-CARBOXYHEXANOATE--COA ligase|Methanocaldococcus vulcanius (strain ATCC 700851

Query: 1 DPDKLATVRI 10
DPDK VR+
Sbjct: 123 DPDKERGVRV 132




48|Sequence|236|245|ATVRITDSPE

>sp|SYW2_HALSA|TRYPTOPHAN--TRNA ligase 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 TVRITDSPE 10
++R+TDSP+
Sbjct: 257 SIRLTDSPD 265


>sp|PUR7_HALSA|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 2 TVRITDSPE 10
TVR+ D+PE
Sbjct: 78 TVRLADAPE 86


>sp|COBQ_METBU|PROBABLE cobyric acid synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 ATVRITDSP 9
T RITD+P
Sbjct: 156 GTARITDAP 164


>sp|SYW_PYRAB|TRYPTOPHAN--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 VRITDSPE 10
+ +TDSPE
Sbjct: 263 IYLTDSPE 270


>sp|SYW_PYRHO|TRYPTOPHAN--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VRITDSPE 10
+ +TDSPE
Sbjct: 263 IYLTDSPE 270


>sp|NADK_METPE|NAD kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 ATVRITDSPE 10
AT+ +T SPE
Sbjct: 239 ATIEMTRSPE 248


>sp|CBID_METTH|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanothermobacter thermautotrophicus

Query: 1 ATVRITDSPE 10
+TV+IT +PE
Sbjct: 80 STVQITGTPE 89


>sp|RS5_PYRAB|SMALL ribosomal subunit protein uS5|Pyrococcus abyssi (strain GE5 /

Query: 2 TVRITDS 8
TVR+TDS
Sbjct: 71 TVRMTDS 77


>sp|RS5_PYRFU|SMALL ribosomal subunit protein uS5|Pyrococcus furiosus (strain ATCC

Query: 2 TVRITDS 8
TVR+TDS
Sbjct: 71 TVRMTDS 77


>sp|RS5_PYRHO|SMALL ribosomal subunit protein uS5|Pyrococcus horikoshii (strain ATCC

Query: 2 TVRITDS 8
TVR+TDS
Sbjct: 71 TVRMTDS 77


>sp|SYW_AERPE|TRYPTOPHAN--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ATVRITDSPE 10
+T+ +TD PE
Sbjct: 264 STIFLTDPPE 273


>sp|RS5_THEKO|SMALL ribosomal subunit protein uS5|Thermococcus kodakarensis (strain

Query: 2 TVRITDS 8
TVR+TDS
Sbjct: 70 TVRMTDS 76




49|Sequence|241|250|TDSPEEIVQK

>sp|SYY_PYRAR|TYROSINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 DSPEEIVQK 10
DSPEEI QK
Sbjct: 260 DSPEEIKQK 268


>sp|SYY1_PYRAE|TYROSINE--TRNA ligase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 DSPEEIVQK 10
DSPEEI QK
Sbjct: 260 DSPEEIRQK 268


>sp|SYY_PYRCJ|TYROSINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 DSPEEIVQK 10
DSPEEI QK
Sbjct: 260 DSPEEIRQK 268


>sp|SYY_PYRHO|TYROSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DSPEEIVQK 10
DSPEEI QK
Sbjct: 265 DSPEEIRQK 273


>sp|SYY_THEGJ|TYROSINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 DSPEEIVQK 10
DSPEEI QK
Sbjct: 265 DSPEEIRQK 273


>sp|SYY_PYRAB|TYROSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 DSPEEIVQK 10
DSPEEI QK
Sbjct: 265 DSPEEIKQK 273


>sp|SYY_THEKO|TYROSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DSPEEIVQK 10
DSPEEI QK
Sbjct: 265 DSPEEIKQK 273


>sp|Y2240_ARCFU|UNCHARACTERIZED protein AF_2240|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SPEEIVQK 10
SPEEI+QK
Sbjct: 2 SPEEILQK 9


>sp|SYY_THEON|TYROSINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 DSPEEIVQK 10
D+PEEI QK
Sbjct: 265 DTPEEIKQK 273


>sp|SYY_THESM|TYROSINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 DSPEEIVQK 10
D+PEEI QK
Sbjct: 265 DTPEEIKQK 273


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 SPEEIVQK 10
+PEE+VQK
Sbjct: 601 TPEEVVQK 608


>sp|SYY_PYRIL|TYROSINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 DSPEEIVQK 10
DSP+EI QK
Sbjct: 260 DSPDEIRQK 268


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SPEEIVQK 10
SPEEIV+K
Sbjct: 65 SPEEIVEK 72


>sp|AROK_PYRAB|SHIKIMATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 DSPEEIVQ 9
D PEEI++
Sbjct: 253 DEPEEIIE 260


>sp|SYY_PYRFU|TYROSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DSPEEIVQK 10
DSPEEI +K
Sbjct: 265 DSPEEIREK 273


>sp|SYY_METLZ|TYROSINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 DSPEEIVQK 10
DSPEEI +K
Sbjct: 221 DSPEEIKKK 229


>sp|AMPPA_METHJ|AMP phosphorylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 TDSPEEIVQK 10
+DSP ++QK
Sbjct: 345 SDSPRSLIQK 354


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii

Query: 1 TDSPEEIVQ 9
TD PEE+V
Sbjct: 21 TDKPEELVN 29


>sp|SYW_PYRHO|TRYPTOPHAN--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TDSPEEIVQK 10
TDSPE++ +K
Sbjct: 266 TDSPEDVEKK 275


>sp|DNAG_METM7|DNA primase DnaG|Methanococcus maripaludis (strain C7 /

Query: 1 TDSPEEIVQ 9
++SPEEIV+
Sbjct: 285 SNSPEEIVE 293


>sp|SYW_PYRAB|TRYPTOPHAN--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 TDSPEEIVQK 10
TDSPE++ +K
Sbjct: 266 TDSPEDVEKK 275


>sp|GATE_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfurisphaera tokodaii (strain DSM

Query: 1 TDSPEEIV 8
TDSP EI+
Sbjct: 166 TDSPTEII 173


>sp|Y4659_METAC|UPF0201 protein MA_4659|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TDSPEEI 7
TDSPEE+
Sbjct: 130 TDSPEEM 136


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 PEEIVQK 10
PEE+VQK
Sbjct: 636 PEEVVQK 642


>sp|SYW_THEON|TRYPTOPHAN--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 TDSPEEIVQK 10
TD PEE+ +K
Sbjct: 265 TDDPEEVGRK 274


>sp|HISX_METTH|HISTIDINOL dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 TDSPEEIVQ 9
TDSPEE ++
Sbjct: 329 TDSPEETLE 337


>sp|BIOB_NITMS|BIOTIN synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 SPEEIVQK 10
SPEE+V K
Sbjct: 92 SPEEVVSK 99


>sp|CAPPA_METKA|PHOSPHOENOLPYRUVATE carboxylase|Methanopyrus kandleri (strain AV19 /

Query: 1 TDSPEEIVQ 9
T SPEE+V+
Sbjct: 126 TSSPEELVE 134


>sp|SYT_THESM|THREONINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 3 SPEEIVQK 10
+PEEIV+K
Sbjct: 52 NPEEIVKK 59


>sp|PTH_PYRHO|PEPTIDYL-TRNA hydrolase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 SPEEIVQK 10
+PEEIV K
Sbjct: 106 APEEIVDK 113


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 2 DSPEEIVQK 10
+SPEE++ K
Sbjct: 581 ESPEELIGK 589


>sp|HISX_THEKO|HISTIDINOL dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 TDSPEEIV 8
T++PEE+V
Sbjct: 281 TENPEELV 288


>sp|SYY_METTH|TYROSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 DSPEEIVQK 10
DSP+EI +K
Sbjct: 225 DSPDEIREK 233


>sp|NDK_IGNH4|NUCLEOSIDE diphosphate kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 TDSPEEIVQK 10
TDSPE++ ++
Sbjct: 117 TDSPEKVARE 126


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 3 SPEEIVQK 10
+P+E++QK
Sbjct: 63 TPDEVIQK 70


>sp|XPB1_SULTO|DNA 3'-5' helicase/translocase StoXPB1|Sulfurisphaera tokodaii (strain

Query: 3 SPEEIVQK 10
+P+E++QK
Sbjct: 318 TPQELIQK 325


>sp|SYY_METJA|TYROSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DSPEEIVQK 10
DSPEEI K
Sbjct: 217 DSPEEIRAK 225


>sp|KAD6_METS5|PUTATIVE adenylate kinase|Metallosphaera sedula (strain ATCC 51363

Query: 3 SPEEIVQK 10
SPEE+V +
Sbjct: 144 SPEEVVNR 151


>sp|SYW_METAC|TRYPTOPHAN--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TDSPEEIVQK 10
TDSP+E +K
Sbjct: 334 TDSPKEGAKK 343


>sp|DPHB_METMA|DIPHTHINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DSPEEIVQ 9
D PEEI++
Sbjct: 256 DGPEEIME 263


>sp|SYY_HALMA|TYROSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 TDSPEEIVQK 10
TDSP+E+ +K
Sbjct: 231 TDSPDEVDEK 240


>sp|PURL_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TDSPEEIVQK 10
T+ PE IV+K
Sbjct: 652 TNEPEWIVEK 661




50|Sequence|246|255|EIVQKFRKAV

>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 EIVQKFRKAV 10
EIVQ+F +AV
Sbjct: 812 EIVQEFDEAV 821


>sp|SYR_METTP|ARGININE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 EIVQKFRKA 9
EIV+KF++A
Sbjct: 218 EIVKKFQRA 226


>sp|PYRH_THEON|URIDYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 2 IVQKFRKA 9
+VQ FRKA
Sbjct: 92 VVQDFRKA 99


>sp|PYRH_THEKO|URIDYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IVQKFRKA 9
+VQ FRKA
Sbjct: 92 VVQDFRKA 99


>sp|PYRH_THEGJ|URIDYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 IVQKFRKA 9
++Q FRKA
Sbjct: 92 VIQDFRKA 99


>sp|AMTAB_PYRAB|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 1 EIVQKFRK 8
EIV++FRK
Sbjct: 277 EIVKEFRK 284


>sp|Y772_SACI1|PROTEIN YN1551_0772|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 EIVQKFRKAV 10
EIV FR+A+
Sbjct: 51 EIVSAFREAI 60


>sp|Y2186_SACI2|PROTEIN LS215_2186|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 EIVQKFRKAV 10
EIV FR+A+
Sbjct: 51 EIVSAFREAI 60


>sp|Y2147_SACI7|PROTEIN YG5714_2147|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 EIVQKFRKAV 10
EIV FR+A+
Sbjct: 51 EIVSAFREAI 60


>sp|Y2028_SACI6|PROTEIN M164_2028|Saccharolobus islandicus (strain M.16.4 /

Query: 1 EIVQKFRKAV 10
EIV FR+A+
Sbjct: 51 EIVSAFREAI 60


>sp|Y2021_SACI4|PROTEIN M1425_2021|Saccharolobus islandicus (strain M.14.25 /

Query: 1 EIVQKFRKAV 10
EIV FR+A+
Sbjct: 51 EIVSAFREAI 60


>sp|LHRC2_THEBM|ATP-DEPENDENT helicase Lhr-Core protein 2|Thermococcus barophilus (strain DSM

Query: 3 VQKFRKAV 10
VQ+FRK V
Sbjct: 592 VQRFRKEV 599


>sp|DNAG_PYRFU|DNA primase DnaG|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EIVQKFRKAV 10
E+V++ RKAV
Sbjct: 168 ELVEEVRKAV 177


>sp|Y2099_SACI3|PROTEIN M1627_2099|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 EIVQKFRKAV 10
EIV FR+A+
Sbjct: 51 EIVSGFREAI 60


>sp|DNAG_PYRAB|DNA primase DnaG|Pyrococcus abyssi (strain GE5 /

Query: 1 EIVQKFRKAV 10
E+V++ RKAV
Sbjct: 168 ELVEEVRKAV 177


>sp|SYR_ARCFU|ARGININE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EIVQKFRKAV 10
+ V+KFR+AV
Sbjct: 212 KTVEKFRRAV 221


>sp|DNAG_PYRHO|DNA primase DnaG|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EIVQKFRKAV 10
E+V++ RKAV
Sbjct: 168 ELVEEVRKAV 177


>sp|SYY_METMA|TYROSINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EIVQKFRKA 9
EI +KF+KA
Sbjct: 228 EIYRKFKKA 236




51|Sequence|251|260|FRKAVTDFTS

>sp|PROB_METBF|GLUTAMATE 5-kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 FRKAVTDFTS 10
F K +TD+TS
Sbjct: 337 FAKGITDYTS 346


>sp|PROB_METMA|GLUTAMATE 5-kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FRKAVTDFTS 10
F K +TD+TS
Sbjct: 337 FAKGITDYTS 346


>sp|PROB_METBU|GLUTAMATE 5-kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 FRKAVTDFTS 10
F K +TD+TS
Sbjct: 330 FGKGITDYTS 339


>sp|Y719_THEVO|UNCHARACTERIZED protein TV0719|Thermoplasma volcanium (strain ATCC 51530

Query: 3 KAVTDFTS 10
KAVTDF S
Sbjct: 146 KAVTDFLS 153




52|Sequence|256|265|TDFTSEVTYD

>sp|SYFB_METB6|PHENYLALANINE--TRNA ligase beta subunit|Methanoregula boonei (strain DSM 21154

Query: 2 DFTSEVTYD 10
DFT E+T D
Sbjct: 162 DFTDELTLD 170


>sp|RISB_METKA|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 TDFTSEVTY 9
T+F E+TY
Sbjct: 11 TEFNREITY 19


>sp|Y127_METJA|PUTATIVE RNase MJ0127|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DFTSEVTYD 10
DFT+++T+D
Sbjct: 22 DFTNDMTFD 30


>sp|GATD_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus vannielii (strain ATCC

Query: 3 FTSEVTY 9
FT E+TY
Sbjct: 268 FTKEITY 274


>sp|ARLY_METTH|ARGININOSUCCINATE lyase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 DFTSEVTYD 10
+FTS +T+D
Sbjct: 18 EFTSSLTFD 26




53|Sequence|261|270|EVTYDPAGRA

>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 YDPAGRA 10
YDP GRA
Sbjct: 931 YDPKGRA 937


>sp|SURE_HYPBU|5'-NUCLEOTIDASE SurE|Hyperthermus butylicus (strain DSM 5456

Query: 2 VTYDPAGR 9
V YDP GR
Sbjct: 203 VLYDPRGR 210


>sp|COFE_HALMA|COENZYME F420:L-glutamate ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 TYDPAGRA 10
+Y+P+GRA
Sbjct: 53 SYEPSGRA 60


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TYDPAGR 9
TYD AGR
Sbjct: 611 TYDHAGR 617


>sp|CSG_METSC|CELL surface glycoprotein|Methanothermus sociabilis

Query: 1 EVTYDPAGR 9
E TY PA R
Sbjct: 289 ESTYGPASR 297


>sp|CSG_METFV|CELL surface glycoprotein|Methanothermus fervidus (strain ATCC 43054

Query: 1 EVTYDPAGR 9
E TY PA R
Sbjct: 289 ESTYGPASR 297


>sp|PGP1_SACS2|PHOSPHOGLYCOLATE phosphatase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VTYDPAGR 9
+ Y+PAG+
Sbjct: 142 IAYNPAGK 149


>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 3 TYDPAG 8
TYDP G
Sbjct: 456 TYDPLG 461


>sp|THIL_HALSA|THIAMINE-MONOPHOSPHATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 EVTYDPAGRA 10
EVT DP RA
Sbjct: 223 EVTADPVERA 232


>sp|RKD1_PYRCJ|ARCADIN-1 calidifontis (strain DSM 21063

Query: 1 EVTYDPAG 8
++ YDP+G
Sbjct: 12 QLVYDPSG 19


>sp|SURE_METKA|5'-NUCLEOTIDASE SurE|Methanopyrus kandleri (strain AV19 /

Query: 1 EVTYDPAGR 9
E YDP GR
Sbjct: 197 EKRYDPRGR 205


>sp|MSRA_METMJ|PEPTIDE methionine sulfoxide reductase MsrA|Methanoculleus marisnigri

Query: 1 EVTYDPA 7
+VTYDP
Sbjct: 62 QVTYDPG 68


>sp|DTDA_AERPE|D-AMINOACYL-TRNA deacylase|Aeropyrum pernix (strain ATCC 700893

Query: 3 TYDPAGR 9
T DPAGR
Sbjct: 9 TGDPAGR 15


>sp|XACC_HALVD|PENTONOLACTONASE XacC|Haloferax volcanii (strain ATCC 29605

Query: 1 EVTYDPAGR 9
+V DPAGR
Sbjct: 98 DVIADPAGR 106


>sp|MSRA_METTH|PEPTIDE methionine sulfoxide reductase MsrA|Methanothermobacter

Query: 1 EVTYDP 6
EVT+DP
Sbjct: 62 EVTFDP 67




54|Sequence|266|275|PAGRAGVSNI

>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 1 PAGRAGVSNI 10
P GR GVS +
Sbjct: 416 PGGRTGVSQL 425


>sp|RPO2N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 2 AGRAGVSNI 10
GRAGVS +
Sbjct: 424 GGRAGVSQL 432


>sp|RPO2N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 2 AGRAGVSNI 10
GRAGVS +
Sbjct: 429 GGRAGVSQL 437


>sp|PYRH_PYRHO|URIDYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 AGRAGVSNI 10
AG+AGVS +
Sbjct: 175 AGKAGVSTV 183


>sp|PELO_METTH|PROTEIN pelota homolog|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 AGRAGVSNI 10
GRAG+S +
Sbjct: 236 GGRAGISEV 244




55|Sequence|271|280|GVSNIVAVHA

>sp|RL22_ARCFU|LARGE ribosomal subunit protein uL22|Archaeoglobus fulgidus (strain ATCC

Query: 2 VSNIVAVHA 10
V N+V VHA
Sbjct: 111 VENLVIVHA 119


>sp|AATI_THEAC|A-TYPE ATP synthase subunit I|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GVSNIVAV 8
G+SN++AV
Sbjct: 499 GISNLIAV 506


>sp|MBHLB_PYRFU|MEMBRANE-BOUND hydrogenase subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GVSNIVAVHA 10
GVS ++ VHA
Sbjct: 84 GVSLLIDVHA 93


>sp|HIS1_METJA|ATP phosphoribosyltransferase|Methanocaldococcus jannaschii (strain

Query: 4 NIVAVHA 10
N+VA+HA
Sbjct: 251 NMVAIHA 257




56|Sequence|276|285|VAVHAAVTGL

>sp|NIFE_METMP|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 1 VAVHAAVTG 9
V VH A+TG
Sbjct: 250 VKVHTAITG 258


>sp|NIFE_METMI|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 1 VAVHAAVTG 9
V VH A+TG
Sbjct: 250 VKVHTAITG 258


>sp|RS13_METMJ|SMALL ribosomal subunit protein uS13|Methanoculleus marisnigri (strain

Query: 2 AVHAAVTGL 10
AVH A+TG+
Sbjct: 22 AVHIALTGI 30


>sp|NADK_HALLT|NAD kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 VHAAVTGL 10
VH AV+GL
Sbjct: 192 VHPAVSGL 199


>sp|Y427_METAR|UPF0173 metal-dependent hydrolase UNCMA_04270|Methanocella arvoryzae

Query: 1 VAVHAAVTGL 10
VA HA TGL
Sbjct: 136 VAYHAGDTGL 145




57|Sequence|281|290|AVTGLSVEEV

>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 2 VTGLSVEEV 10
VTG+SVEE+
Sbjct: 553 VTGISVEEL 561


>sp|Y768_THEKO|UPF0235 protein TK0768|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VTGLSVEEV 10
V GLSVEEV
Sbjct: 80 VKGLSVEEV 88


>sp|RL3_METTP|LARGE ribosomal subunit protein uL3|Methanothrix thermoacetophila (strain

Query: 2 VTGLSVEE 9
VTG SVEE
Sbjct: 163 VTGRSVEE 170


>sp|Y1212_ARCFU|UNCHARACTERIZED protein AF_1212|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VTGLSVEEV 10
+ GLSVEE+
Sbjct: 204 LAGLSVEEI 212


>sp|Y1681_METJA|UNCHARACTERIZED protein MJ1681|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AVTGLSVEEV 10
A+T LS EEV
Sbjct: 138 AITNLSDEEV 147


>sp|NNR_THEPD|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Thermofilum pendens (strain DSM

Query: 2 VTGLSVEEV 10
+TG SVEEV
Sbjct: 388 LTGKSVEEV 396


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 VTGLSVEE 9
VTG+ VEE
Sbjct: 137 VTGMEVEE 144


>sp|MPTB_METJA|DIHYDRONEOPTERIN 2',3'-cyclic phosphate phosphodiesterase|Methanocaldococcus

Query: 3 TGLSVEE 9
TG+SVEE
Sbjct: 37 TGISVEE 43




58|Sequence|286|295|SVEEVVRRSA

>sp|NIFH_METVO|NITROGENASE iron protein|Methanococcus voltae

Query: 1 SVEEVVRR 8
S+EE+VRR
Sbjct: 268 SIEELVRR 275


>sp|TRPC_THEAC|INDOLE-3-GLYCEROL phosphate synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SVEEVVRRSA 10
VE +VRRSA
Sbjct: 134 DVERIVRRSA 143


>sp|CYSC_AERPE|PROBABLE adenylyl-sulfate kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SVEEVVRRS 9
S+EEV+RR
Sbjct: 119 SLEEVIRRD 127


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter thermautotrophicus

Query: 1 SVEEVVRRSA 10
S+EE+VR S
Sbjct: 503 SIEEIVRASG 512


>sp|SYP_PYRAR|PROLINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 VEEVVRRS 9
VEE++RRS
Sbjct: 56 VEELIRRS 63


>sp|PORA_METTH|PYRUVATE synthase subunit PorA|Methanothermobacter thermautotrophicus

Query: 2 VEEVVRRS 9
+EE+VRR+
Sbjct: 359 IEEIVRRT 366


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 SVEEVVRR 8
SVE+V+RR
Sbjct: 494 SVEDVIRR 501


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 2 VEEVVRR 8
VEEV+RR
Sbjct: 497 VEEVIRR 503


>sp|RL6_METTP|LARGE ribosomal subunit protein uL6|Methanothrix thermoacetophila

Query: 2 VEEVVRR 8
VEEVVRR
Sbjct: 2 VEEVVRR 8


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 2 VEEVVRR 8
VEEV+RR
Sbjct: 497 VEEVIRR 503


>sp|TRM56_METMA|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosarcina mazei

Query: 1 SVEEVVRR 8
S+E+VVRR
Sbjct: 47 SLEDVVRR 54




59|Sequence|291|300|VRRSAGMNTA

>sp|NFI_THEPD|ENDONUCLEASE V|Thermofilum pendens (strain DSM 2475

Query: 1 VRRSAGMNTA 10
VRR+AG++ A
Sbjct: 36 VRRAAGVDVA 45


>sp|GGR1_METTH|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 VRRSAGMNTA 10
V R AG+NTA
Sbjct: 166 VARWAGLNTA 175




60|Sequence|296|305|GMNTARYKLA

>sp|Y136_METHJ|UPF0280 protein Mhun_0136|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GMNTARYKL 9
G+ TARY+L
Sbjct: 30 GIRTARYEL 38


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 3 NTARYKL 9
+TARYKL
Sbjct: 816 DTARYKL 822


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 NTARYKL 9
+TARYKL
Sbjct: 816 DTARYKL 822


>sp|TRM1_METTH|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanothermobacter

Query: 1 GMNTARYKLA 10
MN ARY+ A
Sbjct: 194 AMNLARYRKA 203


>sp|PYRG_SULAC|CTP synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GMNTARY 7
G+NT RY
Sbjct: 80 GINTTRY 86




61|Sequence|301|310|RYKLAVADAV

>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 RYKLAVAD 8
RYKLAV +
Sbjct: 804 RYKLAVVE 811




62|Sequence|306|315|VADAVIEKFA

>sp|HMD_METM7|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain C7 /

Query: 4 AVIEKFA 10
A+IEKFA
Sbjct: 157 AIIEKFA 163


>sp|HMD_METMP|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 4 AVIEKFA 10
A+IEKFA
Sbjct: 157 AIIEKFA 163


>sp|HMD_METVS|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 4 AVIEKFA 10
A+IEKFA
Sbjct: 157 AIIEKFA 163


>sp|CBID_METTH|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanothermobacter thermautotrophicus

Query: 1 VADAVIEKF 9
+ADA+ E+F
Sbjct: 320 IADAIRERF 328




63|Sequence|311|320|IEKFAPIKRE

>sp|TRM1_METTH|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanothermobacter

Query: 1 IEKFAPIKRE 10
+ FAP+KRE
Sbjct: 251 VNGFAPLKRE 260


>sp|MALE_PYRAB|MALTOTRIOSE-BINDING protein|Pyrococcus abyssi (strain GE5 /

Query: 1 IEKFAPIKRE 10
++KFAP+ RE
Sbjct: 163 LQKFAPMARE 172


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 1 IEKFAPIKRE 10
+EK+ PI++E
Sbjct: 240 LEKYTPIQKE 249


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 IEKFAPIKRE 10
+EKF PI R+
Sbjct: 198 VEKFHPIDRK 207


>sp|RFCS_STAMF|REPLICATION factor C small subunit|Staphylothermus marinus (strain ATCC 43588

Query: 3 KFAPIKRE 10
+FAP+K+E
Sbjct: 163 RFAPLKKE 170


>sp|NUCS_SULTO|ENDONUCLEASE NucS|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EKFAPIKRE 10
E F PI+RE
Sbjct: 143 EGFKPIQRE 151


>sp|RLME_METB6|RIBOSOMAL RNA large subunit methyltransferase|Methanoregula boonei (strain

Query: 2 EKFAPIKRE 10
EKFA I+R+
Sbjct: 32 EKFAVIRRD 40


>sp|SPSS_METMA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IEKFAPIKRE 10
++KF IKRE
Sbjct: 8 LQKFGFIKRE 17


>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 IEKFAPIKRE 10
I F P+KRE
Sbjct: 113 ILAFVPVKRE 122


>sp|TIAS_PYRHO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrococcus horikoshii (strain

Query: 1 IEKFAPIK 8
+EKF PIK
Sbjct: 337 LEKFYPIK 344


>sp|TIAS_THESM|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus sibiricus (strain

Query: 1 IEKFAPIK 8
+EKF PIK
Sbjct: 338 LEKFYPIK 345


>sp|RTCA_PYRCJ|RNA 3'-terminal phosphate cyclase|Pyrobaculum calidifontis (strain DSM

Query: 1 IEKFAPIK 8
+E+F P+K
Sbjct: 319 VERFLPVK 326


>sp|AATB_METAR|A-TYPE ATP synthase subunit B|Methanocella arvoryzae (strain DSM 22066

Query: 1 IEKFAPIKRE 10
IEK+ P KR+
Sbjct: 448 IEKYHPSKRK 457


>sp|TIAS_THEGJ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus gammatolerans

Query: 1 IEKFAPIK 8
+EKF P+K
Sbjct: 337 LEKFYPVK 344


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 3 KFAPIKRE 10
+F+P+K+E
Sbjct: 1686 RFSPLKKE 1693




64|Sequence|316|325|PIKREIEKLK

>sp|Y797_METJA|UNCHARACTERIZED ABC transporter permease MJ0797|Methanocaldococcus jannaschii

Query: 3 KREIEKLK 10
KR+IEKL+
Sbjct: 71 KRDIEKLR 78


>sp|Y1595_METJA|UPF0104 membrane protein MJ1595|Methanocaldococcus jannaschii (strain ATCC

Query: 2 IKREIEKLK 10
IKREI+K K
Sbjct: 326 IKREIDKKK 334


>sp|Y667_ARCFU|UNCHARACTERIZED protein AF_0667|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IKREIEKLK 10
IKREIE+L+
Sbjct: 52 IKREIERLR 60


>sp|RL23_SULTO|LARGE ribosomal subunit protein uL23|Sulfurisphaera tokodaii (strain

Query: 1 PIKREIEKL 9
IKREIEK+
Sbjct: 34 DIKREIEKM 42


>sp|MAX1_METAC|SODIUM/CALCIUM exchanger MaX1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PIKREIEKLK 10
P+K EI+ LK
Sbjct: 94 PMKTEIDMLK 103


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IKREIEKLK 10
+KREI KLK
Sbjct: 434 VKREIAKLK 442


>sp|VAPC9_ARCFU|RIBONUCLEASE VapC9|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PIKREIEKLK 10
+KRE+EKL+
Sbjct: 48 SVKRELEKLE 57


>sp|KDGA_SULTO|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PIKREIEK 8
P+K+EIE+
Sbjct: 280 PVKKEIER 287


>sp|KDGA_SULAC|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IKREIEKLK 10
+KREIE LK
Sbjct: 272 LKREIEPLK 280


>sp|VAPC4_METJA|RIBONUCLEASE VapC4|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PIKREIEKL 9
PIK E+E+L
Sbjct: 40 PIKEELERL 48


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IKREIEKLK 10
+KREI KLK
Sbjct: 434 VKREIAKLK 442


>sp|AATA_METS3|A-TYPE ATP synthase subunit A|Methanobrevibacter smithii (strain ATCC

Query: 1 PIKREIEKLK 10
P+K EI K+K
Sbjct: 550 PVKEEIGKMK 559


>sp|COABC_METJA|COENZYME A biosynthesis bifunctional protein|Methanocaldococcus jannaschii

Query: 1 PIKREIEKLK 10
IKR I+KLK
Sbjct: 145 AIKRHIDKLK 154


>sp|FOLD_PICTO|BIFUNCTIONAL protein FolD|Picrophilus torridus (strain ATCC 700027

Query: 2 IKREIEKLK 10
+K EIEK+K
Sbjct: 16 LKNEIEKIK 24


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 1 PIKREIEK 8
P++REIE+
Sbjct: 170 PVEREIER 177


>sp|RNH2_PYRAB|RIBONUCLEASE HII|Pyrococcus abyssi (strain GE5 /

Query: 4 REIEKLK 10
REIEKLK
Sbjct: 154 REIEKLK 160


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 1 PIKREIEKL 9
P+K EI++L
Sbjct: 631 PLKNEIDRL 639


>sp|RNH2_PYRHO|RIBONUCLEASE HII|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 REIEKLK 10
REIEKLK
Sbjct: 154 REIEKLK 160


>sp|RL23_ARCFU|LARGE ribosomal subunit protein uL23|Archaeoglobus fulgidus (strain

Query: 2 IKREIEKL 9
IK+EIEKL
Sbjct: 36 IKKEIEKL 43


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IKREIEKLK 10
++REIEK K
Sbjct: 277 LQREIEKFK 285


Query: 2 IKREIEKLK 10
+ REIEKL+
Sbjct: 270 LNREIEKLQ 278


>sp|RAD50_METKA|DNA double-strand break repair Rad50|Methanopyrus kandleri (strain AV19

Query: 2 IKREIEKLK 10
+KRE+E+LK
Sbjct: 328 VKRELEELK 336


>sp|NADA_PYRFU|QUINOLINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IKREIEKLK 10
+K+EIE+LK
Sbjct: 7 LKKEIERLK 15


>sp|CAS1_KORCO|CRISPR-ASSOCIATED endonuclease Cas1|Korarchaeum cryptofilum (strain OPF8)

Query: 2 IKREIEKLK 10
+KRE+E+LK
Sbjct: 147 LKREMEELK 155


>sp|Y611_ARCFU|UNCHARACTERIZED protein AF_0611|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PIKREIEKLK 10
P KRE+ +K
Sbjct: 116 PFKREVNSIK 125




65|Sequence|321|330|IEKLKLDKDH

>sp|HMEA_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 IEKLKLDK 8
I KLKLDK
Sbjct: 97 IAKLKLDK 104


>sp|Y1674_METJA|CRISPR-ASSOCIATED protein MJ1674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IEKLKLDK 8
IEKLK+DK
Sbjct: 47 IEKLKVDK 54


>sp|COBD_METJA|PROBABLE cobalamin biosynthesis protein CobD|Methanocaldococcus jannaschii

Query: 5 KLDKDH 10
KLDK+H
Sbjct: 136 KLDKEH 141


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 2 EKLKLDKDH 10
EKL + KDH
Sbjct: 505 EKLAIAKDH 513


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 1 IEKLKLDKDH 10
IEK++LD H
Sbjct: 416 IEKVRLDFSH 425




66|Sequence|326|335|LDKDHLEKVL

>sp|AGL16_SULAC|ARCHAEAL glycosylation protein 16|Sulfolobus acidocaldarius (strain ATCC

Query: 2 DKDHLEKVL 10
DKD+LEK++
Sbjct: 216 DKDYLEKIM 224


>sp|TRPE3_HALMA|ANTHRANILATE synthase component 1 3|Haloarcula marismortui (strain ATCC 43049

Query: 1 LDKDHLEK 8
LD++HLE+
Sbjct: 98 LDREHLER 105


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LDKDHLEKV 9
LDKD EK+
Sbjct: 13 LDKDQFEKI 21


>sp|GLKA_THELN|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus litoralis (strain ATCC

Query: 1 LDKDHLEK 8
LDKD LEK
Sbjct: 47 LDKDDLEK 54


>sp|APE1_AERPE|HOMING endonuclease I-ApeI|Aeropyrum pernix (strain ATCC 700893

Query: 2 DKDHLEKVL 10
+KD+LE+V+
Sbjct: 33 NKDYLERVI 41


>sp|PURA1_METAC|ADENYLOSUCCINATE synthetase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 KDHLEKVL 10
K H EKVL
Sbjct: 156 KSHFEKVL 163


>sp|PYRH_THEAC|URIDYLATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DKDHLEKVL 10
D D+LEK+L
Sbjct: 205 DIDNLEKIL 213


>sp|PRIS_HALSA|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 1 LDKDHLEKV 9
LD DHL +V
Sbjct: 99 LDADHLPRV 107


>sp|PRIS_HALS3|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 1 LDKDHLEKV 9
LD DHL +V
Sbjct: 99 LDADHLPRV 107


>sp|EF2_METM7|ELONGATION factor 2|Methanococcus maripaludis (strain C7 /

Query: 1 LDKDHLEKVL 10
LDKD +KV+
Sbjct: 533 LDKDQAKKVM 542


>sp|SYH_PYRFU|HISTIDINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LDKDHLEKVL 10
LDK+ +EKVL
Sbjct: 203 LDKNGIEKVL 212


>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LDKDHLEKVL 10
LDKDH E +
Sbjct: 61 LDKDHQETLF 70


>sp|Y836_METJA|UNCHARACTERIZED protein MJ0836|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDKDHLEKVL 10
L K+HL+KVL
Sbjct: 4 LAKNHLKKVL 13


>sp|MCH_METB6|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanoregula boonei (strain DSM 21154

Query: 3 KDHLEKV 9
KD+LEK+
Sbjct: 244 KDYLEKI 250


>sp|KPRS_METMA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LDKDHLEK 8
D DHL+K
Sbjct: 187 FDHDHLQK 194


>sp|ACDB_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit beta|Archaeoglobus fulgidus

Query: 2 DKDHLEKVL 10
DKD +EK+L
Sbjct: 175 DKDLVEKLL 183


>sp|KPRS_METAC|RIBOSE-PHOSPHATE pyrophosphokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LDKDHLEK 8
D DHL+K
Sbjct: 175 FDHDHLQK 182


>sp|RL1_THEPD|LARGE ribosomal subunit protein uL1|Thermofilum pendens (strain DSM

Query: 1 LDKDHLEKV 9
+DKD L+K+
Sbjct: 89 VDKDELQKI 97


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 LDKDHLEKVL 10
+D+D LEK L
Sbjct: 20 IDEDRLEKGL 29


>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC

Query: 1 LDKDHLEKV 9
LDK+ EKV
Sbjct: 11 LDKEQFEKV 19


>sp|PCNA_PYRAB|DNA polymerase sliding clamp|Pyrococcus abyssi (strain GE5 /

Query: 1 LDKDHLEKVL 10
++ DHL+KVL
Sbjct: 71 VNMDHLKKVL 80


>sp|IPK_METTH|ISOPENTENYL phosphate kinase|Methanothermobacter thermautotrophicus (strain

Query: 1 LDKDHLEKV 9
+D+D+LE++
Sbjct: 21 IDRDNLERI 29


>sp|Y2387_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 3 KDHLEKVL 10
KDH E+V+
Sbjct: 454 KDHAERVI 461


>sp|GMHA_THEVO|PROBABLE phosphoheptose isomerase|Thermoplasma volcanium (strain ATCC

Query: 1 LDKDHLEKV 9
+D +H+EK+
Sbjct: 31 IDLNHIEKI 39




67|Sequence|331|340|LEKVLQIGSA

>sp|SYD_PYRAE|ASPARTATE--TRNA(ASP) ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LEKVLQIGSA 10
LE+V +IG A
Sbjct: 202 LERVFEIGPA 211


>sp|MTMC1_METAC|MONOMETHYLAMINE corrinoid protein 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EKVLQIGSA 10
EKVL +GSA
Sbjct: 147 EKVLLVGSA 155


>sp|MTMC2_METBA|MONOMETHYLAMINE corrinoid protein 2|Methanosarcina barkeri

Query: 2 EKVLQIGSA 10
EKVL +GSA
Sbjct: 146 EKVLLVGSA 154


>sp|MTMC1_METBA|MONOMETHYLAMINE corrinoid protein 1|Methanosarcina barkeri

Query: 2 EKVLQIGSA 10
EKVL +GSA
Sbjct: 146 EKVLLVGSA 154


>sp|PRIS_METBF|DNA primase small subunit PriS|Methanosarcina barkeri (strain Fusaro /

Query: 3 KVLQIGSA 10
KVL++GSA
Sbjct: 158 KVLKLGSA 165


>sp|GLYA_SULAC|SERINE hydroxymethyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 LEKVLQI 7
LEK+LQI
Sbjct: 8 LEKILQI 14




68|Sequence|336|345|QIGSAKAKEL

>sp|GGR_METS3|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 GSAKAKEL 10
GSAKAKE+
Sbjct: 170 GSAKAKEM 177


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 1 QIGSAKAKEL 10
QIG++ AKEL
Sbjct: 639 QIGNSIAKEL 648


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 QIGSAKAKEL 10
QIG++ AKEL
Sbjct: 639 QIGNSIAKEL 648


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 QIGSAKAKEL 10
QIG++ AKEL
Sbjct: 639 QIGNSIAKEL 648


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 QIGSAKAKEL 10
QIG++ AKEL
Sbjct: 639 QIGNSIAKEL 648


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 QIGSAKAKEL 10
QIG++ AKEL
Sbjct: 639 QIGNSIAKEL 648


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 QIGSAKAKEL 10
QIG++ AKEL
Sbjct: 639 QIGNSIAKEL 648


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 QIGSAKAKEL 10
QIG++ AKEL
Sbjct: 639 QIGNSIAKEL 648


>sp|RS5_SACI1|SMALL ribosomal subunit protein uS5|Saccharolobus islandicus (strain

Query: 2 IGSAKAKEL 10
IG+ KAK+L
Sbjct: 91 IGTGKAKQL 99




69|Sequence|341|350|KAKELAYTVC

>sp|NAOX_METJA|NADH oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KAKELAYTVC 10
K KE+AY+ C
Sbjct: 33 KEKEIAYSPC 42


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 1 KAKELAYT 8
KAKEL Y+
Sbjct: 493 KAKELGYS 500


>sp|SLAA_SACS2|S-LAYER protein A|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 AKELAYT 8
AKELAY+
Sbjct: 134 AKELAYS 140


>sp|PYRC_SACS2|DIHYDROOROTASE solfataricus (strain ATCC 35092

Query: 2 AKELAYTV 9
AKEL +TV
Sbjct: 207 AKELGFTV 214


>sp|RLME_METB6|RIBOSOMAL RNA large subunit methyltransferase|Methanoregula boonei (strain

Query: 1 KAKELAYTVC 10
+AKE+ TVC
Sbjct: 94 QAKEMLGTVC 103


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 KAKELAYTVC 10
+ KE+ YT C
Sbjct: 463 RLKEVMYTCC 472


>sp|CYSC_PYRAB|PROBABLE adenylyl-sulfate kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 KAKELAY 7
KAKEL Y
Sbjct: 166 KAKELGY 172


>sp|RPO11_NANEQ|DNA-DIRECTED RNA polymerase subunit Rpo11|Nanoarchaeum equitans (strain

Query: 3 KELAYTV 9
KE+AYT+
Sbjct: 34 KEIAYTI 40




70|Sequence|346|360|AYTVCQEVKKLVGFL

>sp|AATB_NITMS|A-TYPE ATP synthase subunit B|Nitrosopumilus maritimus (strain SCM1)

Query: 1 AYTVCQEVKKLVGFL 15
AY+ QEV+ L G +
Sbjct: 379 AYSRAQEVRALAGIV 393


>sp|AATB_CENSY|A-TYPE ATP synthase subunit B|Cenarchaeum symbiosum (strain A)

Query: 1 AYTVCQEVKKLVGFL 15
AY+ QEV+ L G +
Sbjct: 379 AYSRAQEVRALAGIV 393


>sp|PYRDB_METJA|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanocaldococcus jannaschii

Query: 1 AYTVCQEVKKLV 12
+Y VC+ VKK V
Sbjct: 150 SYDVCKAVKKAV 161


>sp|Y1412_META3|UPF0210 protein Maeo_1412|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 TVCQEVKK 10
TVC E+KK
Sbjct: 244 TVCNEIKK 251


>sp|Y1187_METJA|UNCHARACTERIZED protein MJ1187|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 QEVKKLVGFL 15
+E+KKL GF+
Sbjct: 31 EEIKKLYGFV 40


>sp|DNAG_HYPBU|DNA primase DnaG|Hyperthermus butylicus (strain DSM 5456

Query: 3 TVCQEVKKLVGFL 15
+V +EVKKL G L
Sbjct: 333 SVIEEVKKLSGTL 345


>sp|Y1037_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 YTVCQEVKKLVGFL 15
++ QEV+K+VG +
Sbjct: 69 FSKLQEVRKIVGIV 82


>sp|SURE_METLZ|5'-NUCLEOTIDASE SurE|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 AYTVCQEVKKLV 12
A+ C E+KK++
Sbjct: 248 AFKACPELKKMI 259


>sp|HEM1_METAR|GLUTAMYL-TRNA reductase|Methanocella arvoryzae (strain DSM 22066

Query: 2 YTVCQEVKKLVGF 14
Y V + V+ +VGF
Sbjct: 55 YAVAESVEDIVGF 67


>sp|AROA_METS3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 3 TVCQEVKKL 11
T C E+KKL
Sbjct: 358 TTCSELKKL 366


>sp|SYW_METKA|TRYPTOPHAN--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 VCQEVKKLVG 13
+C E K++VG
Sbjct: 327 ICGECKRMVG 336


>sp|MPTA_METHJ|GTP cyclohydrolase MptA|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 TVCQEVKKL 11
T+CQEV K+
Sbjct: 134 TLCQEVVKV 142


>sp|FAU1_SULTO|PROBABLE ribonuclease FAU-1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YTVCQEVKKLV 12
+T+ +EVKK++
Sbjct: 402 FTIIEEVKKIL 412


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 6 QEVKKLVGF 14
QEV +LVG+
Sbjct: 654 QEVAQLVGY 662


>sp|AATA_THEAC|A-TYPE ATP synthase subunit A|Thermoplasma acidophilum (strain ATCC 25905

Query: 6 QEVKKLVGF 14
QEV +LVG+
Sbjct: 642 QEVAQLVGY 650


>sp|SYFB_METMP|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain DSM 14266

Query: 3 TVCQEVKKLVG 13
T C+ +KK+ G
Sbjct: 464 TKCKNIKKIAG 474


>sp|SYFB_METM7|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C7 /

Query: 3 TVCQEVKKLVG 13
T C+ +KK+ G
Sbjct: 464 TKCKNIKKIAG 474


>sp|SYFB_METM6|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C6 /

Query: 3 TVCQEVKKLVG 13
T C+ +KK+ G
Sbjct: 464 TKCKNIKKIAG 474


>sp|SYFB_METM5|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C5 /

Query: 3 TVCQEVKKLVG 13
T C+ +KK+ G
Sbjct: 464 TKCKNIKKIAG 474


>sp|LIPA_PICTO|LIPOYL synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 YTVCQE 7
YTVC+E
Sbjct: 31 YTVCEE 36


>sp|RS10_METKA|SMALL ribosomal subunit protein uS10|Methanopyrus kandleri (strain AV19

Query: 4 VCQEVKKLV 12
VC+ +KK+V
Sbjct: 20 VCERIKKVV 28


>sp|ENO_METST|ENOLASE stadtmanae (strain ATCC 43021

Query: 2 YTVCQEVKKLVGFL 15
+T C+EV G L
Sbjct: 217 FTSCEEVSDETGVL 230


>sp|HIS5_METKA|IMIDAZOLE glycerol phosphate synthase subunit|Methanopyrus kandleri (strain

Query: 4 VCQEVKKLVG 13
+C E+++L+G
Sbjct: 62 LCDEIRELLG 71


>sp|CBID_SACI6|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 5 CQEVKKLVG 13
C EVKK G
Sbjct: 62 CAEVKKFSG 70


>sp|CBID_SACI4|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 5 CQEVKKLVG 13
C EVKK G
Sbjct: 62 CAEVKKFSG 70


>sp|CBID_SACI3|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 5 CQEVKKLVG 13
C EVKK G
Sbjct: 62 CAEVKKFSG 70


>sp|Y528_PYRFU|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus furiosus (strain

Query: 6 QEVKKLVGFL 15
+EV+KLVG +
Sbjct: 75 REVRKLVGIV 84


>sp|CBID_SACI2|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 5 CQEVKKLVG 13
C EVKK G
Sbjct: 62 CAEVKKFSG 70


>sp|CBID_SACI7|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain Y.G.57.14

Query: 5 CQEVKKLVG 13
C EVKK G
Sbjct: 62 CAEVKKFSG 70


>sp|CBID_SACI1|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain Y.N.15.51

Query: 5 CQEVKKLVG 13
C EVKK G
Sbjct: 62 CAEVKKFSG 70


>sp|NIFK_METBA|NITROGENASE molybdenum-iron protein beta chain|Methanosarcina barkeri

Query: 2 YTVCQEVKK 10
YT C+EV +
Sbjct: 4 YTPCEEVTR 12


>sp|CBID_SACS2|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 5 CQEVKKLVG 13
C EVKK G
Sbjct: 62 CAEVKKFSG 70


>sp|PRIS_METKA|DNA primase small subunit PriS|Methanopyrus kandleri (strain AV19 /

Query: 5 CQEVKKLVGF 14
C E+++ +GF
Sbjct: 109 CDELRRALGF 118


>sp|SRP19_HYPBU|SIGNAL recognition particle 19 kDa|Hyperthermus butylicus (strain DSM

Query: 4 VCQEVKKL 11
+ QEVKKL
Sbjct: 87 IAQEVKKL 94


>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 6 QEVKKLVGFL 15
QE+ KLVG L
Sbjct: 24 QEIVKLVGQL 33


>sp|PGK_METMA|PHOSPHOGLYCERATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AYTVCQEVKKL 11
AY QE KKL
Sbjct: 406 AYNKYQEAKKL 416


>sp|SYT_META3|THREONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 YTVCQEVKKLV 12
+TVC++ K+ +
Sbjct: 351 HTVCKDTKQTI 361


>sp|DNPH1_METBU|PUTATIVE 2'-deoxynucleoside 5'-phosphate N-hydrolase 1|Methanococcoides

Query: 1 AYTVCQEVKK 10
Y VC +KK
Sbjct: 81 GYEVCSAIKK 90


>sp|MTM3_METJA|TYPE II methyltransferase M.MjaIII|Methanocaldococcus jannaschii (strain

Query: 5 CQEVKKLVGFL 15
C EVK++ F+
Sbjct: 119 CDEVKRVAQFI 129




71|Sequence|351|360|QEVKKLVGFL

>sp|Y1187_METJA|UNCHARACTERIZED protein MJ1187|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QEVKKLVGFL 10
+E+KKL GF+
Sbjct: 31 EEIKKLYGFV 40


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 1 QEVKKLVGF 9
QEV +LVG+
Sbjct: 654 QEVAQLVGY 662


>sp|AATA_THEAC|A-TYPE ATP synthase subunit A|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 QEVKKLVGF 9
QEV +LVG+
Sbjct: 642 QEVAQLVGY 650


>sp|Y1037_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 QEVKKLVGFL 10
QEV+K+VG +
Sbjct: 73 QEVRKIVGIV 82


>sp|PFDA_METST|PREFOLDIN subunit alpha|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 QEVKKLVGFL 10
+EV+KL+G L
Sbjct: 101 EEVQKLIGSL 110


>sp|Y528_PYRFU|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus furiosus (strain

Query: 1 QEVKKLVGFL 10
+EV+KLVG +
Sbjct: 75 REVRKLVGIV 84


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QEVKKLVGF 9
+E+KKL+ +
Sbjct: 403 EEIKKLISY 411


>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 QEVKKLVGFL 10
QE+ KLVG L
Sbjct: 24 QEIVKLVGQL 33


>sp|K6PF_METAC|ADP-SPECIFIC phosphofructokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QEVKKLVGFL 10
+++ KLVGF
Sbjct: 44 EDLSKLVGFF 53






THE END