SYT11_HUMAN Blast Output
Viruses
1|Sequence|1|10|MAEITNIRPS

***** No hits found ******


2|Sequence|6|15|NIRPSFDVSP

>sp|TMP_BPFO1|PROBABLE tape measure protein|Salmonella phage Felix O1 (isolate

Query: 1 NIRPSFDVSP 10
NI +FDV P
Sbjct: 40 NINKAFDVKP 49


>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)

Query: 2 IRPSFDVSP 10
++P+FD++P
Sbjct: 1232 VKPNFDLTP 1240


>sp|RDRP_PMTVS|REPLICASE large subunit|Potato mop-top virus (isolate Potato/Sweden/Sw)

Query: 1 NIRPSFDVSP 10
+++P D+SP
Sbjct: 1492 DVKPKLDLSP 1501


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 4 PSFDVSP 10
P+FDV+P
Sbjct: 367 PNFDVTP 373


>sp|VP35_FOWPN|IMMUNODOMINANT envelope protein p35|Fowlpox virus (strain NVSL) (FPV)

Query: 1 NIRPSFDVS 9
N +PSFD+S
Sbjct: 208 NNKPSFDIS 216


>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /

Query: 4 PSFDVSP 10
P FDV+P
Sbjct: 356 PQFDVTP 362


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 4 PSFDVSP 10
P+FDV+P
Sbjct: 366 PNFDVTP 372


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 4 PSFDVSP 10
P FDV+P
Sbjct: 356 PQFDVTP 362


>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)

Query: 4 PSFDVSP 10
P FDV+P
Sbjct: 356 PQFDVTP 362


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 4 PSFDVSP 10
P FDV+P
Sbjct: 356 PEFDVTP 362


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 4 PSFDVSP 10
P FDV+P
Sbjct: 356 PQFDVTP 362


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 4 PSFDVSP 10
P FDV+P
Sbjct: 356 PEFDVTP 362


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 4 PSFDVSP 10
P FDV+P
Sbjct: 356 PQFDVTP 362


>sp|POLG_SVDVU|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 4 PSFDVSP 10
P FDV+P
Sbjct: 356 PQFDVTP 362


>sp|POLG_SVDVH|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 4 PSFDVSP 10
P FDV+P
Sbjct: 356 PQFDVTP 362


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 4 PSFDVSP 10
P FDV+P
Sbjct: 356 PQFDVTP 362


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 4 PSFDVSP 10
P FDV+P
Sbjct: 357 PQFDVTP 363


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 4 PSFDVSP 10
P FDV+P
Sbjct: 356 PQFDVTP 362


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 4 PSFDVSP 10
P FDV+P
Sbjct: 356 PQFDVTP 362


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 4 PSFDVSP 10
P FDV+P
Sbjct: 359 PQFDVTP 365


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 4 PSFDVSP 10
P FDV+P
Sbjct: 358 PQFDVTP 364


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 4 PSFDVSP 10
P FDV+P
Sbjct: 356 PQFDVTP 362


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 2 IRPSFDVSP 10
IR FDV+P
Sbjct: 2102 IRDGFDVTP 2110


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 4 PSFDVSP 10
P FDV+P
Sbjct: 366 PEFDVTP 372


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 4 PSFDVSP 10
P FDV+P
Sbjct: 366 PEFDVTP 372


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 4 PSFDVSP 10
P FDV+P
Sbjct: 367 PEFDVTP 373


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 4 PSFDVSP 10
P FDV+P
Sbjct: 357 PEFDVTP 363


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 4 PSFDVSP 10
P FDV+P
Sbjct: 366 PEFDVTP 372


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 4 PSFDVSP 10
P FDV+P
Sbjct: 367 PEFDVTP 373


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 4 PSFDVSP 10
P FDV+P
Sbjct: 366 PEFDVTP 372




3|Sequence|11|20|FDVSPVVAGL

>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 FDVSPVVAG 9
FD SPV+ G
Sbjct: 794 FDTSPVIKG 802




4|Sequence|16|25|VVAGLIGASV

>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 1 VVAGLIGASV 10
VV+GL+GA+V
Sbjct: 1834 VVSGLVGAAV 1843


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 VVAGLIGASV 10
VV+GL+GA+V
Sbjct: 1834 VVSGLVGAAV 1843


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 1 VVAGLIGASV 10
VV+GL+GA+V
Sbjct: 1834 VVSGLVGAAV 1843


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 VVAGLIGASV 10
VV+GL+GA+V
Sbjct: 1834 VVSGLVGAAV 1843


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1 VVAGLIGASV 10
VV+GL+GA+V
Sbjct: 1834 VVSGLVGAAV 1843


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1 VVAGLIGASV 10
VV+GL+GA+V
Sbjct: 1834 VVSGLVGAAV 1843


>sp|DNBI_GAHVM|MAJOR DNA-binding protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 2 VAGLIGASV 10
VAGL+GA V
Sbjct: 367 VAGLVGAMV 375


>sp|POL1_RCMV|RNA1 polyprotein|Red clover mottle virus (RCMV)

Query: 3 AGLIGASV 10
AGL+GA+V
Sbjct: 896 AGLVGAAV 903


>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 2 VAGLIGASV 10
VAG+IGA V
Sbjct: 372 VAGVIGAMV 380


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 VAGLIGASV 10
VAG+IGA V
Sbjct: 372 VAGVIGAMV 380


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 1 VVAGLIGASV 10
VV+GL GA+V
Sbjct: 1835 VVSGLAGATV 1844


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1 VVAGLIGASV 10
VV+GL GA+V
Sbjct: 1834 VVSGLAGAAV 1843


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 1 VVAGLIGASV 10
VV+GL GA+V
Sbjct: 1832 VVSGLAGATV 1841


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1 VVAGLIGASV 10
VV+GL GA+V
Sbjct: 1835 VVSGLAGAAV 1844


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 1 VVAGLIGASV 10
VV+GL GA+V
Sbjct: 1831 VVSGLAGAAV 1840


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 1 VVAGLIGASV 10
VV+GL GA+V
Sbjct: 1828 VVSGLAGAAV 1837


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 1 VVAGLIGASV 10
VV+GL GA+V
Sbjct: 1830 VVSGLAGAAV 1839


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 1 VVAGLIGASV 10
VV+GL GA+V
Sbjct: 1835 VVSGLAGAAV 1844


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 1 VVAGLIGASV 10
VV+GL GA++
Sbjct: 1834 VVSGLAGAAI 1843


>sp|ENV_SIVTN|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate TAN1)

Query: 1 VVAGLIGASV 10
+VAGL+G +
Sbjct: 689 IVAGLVGLRI 698


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1 VVAGLIGASV 10
VV+G+ GA+V
Sbjct: 1831 VVSGMAGAAV 1840




5|Sequence|21|30|IGASVLVVCV

>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)

Query: 1 IGASVLVVC 9
I ASVL+VC
Sbjct: 984 IQASVLIVC 992




6|Sequence|26|35|LVVCVSVTVF

>sp|DNBI_ADE07|PROBABLE DNA-binding protein|Human adenovirus B serotype 7

Query: 2 VVCVSVTVF 10
VVC+ +T+F
Sbjct: 81 VVCIGMTIF 89




7|Sequence|31|40|SVTVFVWSCC

>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60

Query: 1 SVTVFVWSCC 10
S++ ++W CC
Sbjct: 381 SISEWIWKCC 390


>sp|IKBL_ASFK5|IKB-LIKE protein|African swine fever virus (isolate

Query: 2 VTVFVWSC 9
+TVF+W C
Sbjct: 50 ITVFMWIC 57


>sp|POL1_BAMMN|GENOME polyprotein 1|Barley mild mosaic virus (strain

Query: 4 VFVWSCC 10
VF+WS C
Sbjct: 236 VFIWSLC 242


>sp|VE1_MNPVA|REPLICATION protein E1|Mastomys natalensis papillomavirus (isolate African

Query: 1 SVTVFVWSCC 10
S++ +VW CC
Sbjct: 373 SMSQWVWKCC 382


>sp|SERDT_BPSAV|SERINYLTRANSFERASE phage ViI

Query: 5 FVWSCC 10
F+W CC
Sbjct: 81 FLWGCC 86


>sp|RDRP_LDCPR|RNA-DIRECTED RNA polymerase VP2|Lymantria dispar cypovirus 1 (isolate

Query: 5 FVWSCC 10
FV++CC
Sbjct: 206 FVYTCC 211


>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4 VFVWSCC 10
VF++ CC
Sbjct: 190 VFIYYCC 196


>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4 VFVWSCC 10
VF++ CC
Sbjct: 190 VFIYYCC 196


>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4 VFVWSCC 10
VF++ CC
Sbjct: 190 VFIYYCC 196


>sp|DNB2_ADES1|DNA-BINDING protein|Snake adenovirus serotype 1 (SnAdV-1)

Query: 4 VFVWSCC 10
VFV+ CC
Sbjct: 271 VFVFQCC 277


>sp|L_CPSVP|RNA-DIRECTED RNA polymerase L|Citrus psorosis virus (isolate Spain/P-121)

Query: 2 VTVFVWSCC 10
+ +F+ SCC
Sbjct: 1610 LKIFIVSCC 1618


>sp|GLYCO_SHRV|GLYCOPROTEIN rhabdovirus (SHRV)

Query: 4 VFVWSCC 10
+ +W CC
Sbjct: 482 ILIWYCC 488


>sp|TEG7_HHV8P|TEGUMENT protein ORF55|Human herpesvirus 8 type P

Query: 5 FVWSCC 10
+ W+CC
Sbjct: 6 YTWTCC 11


>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)

Query: 2 VTVFVWSCC 10
+T+F+ +CC
Sbjct: 472 LTIFIMTCC 480


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 1 SVTVFVWS 8
S T+FVWS
Sbjct: 2279 SNTIFVWS 2286


>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 1 SVTVFVWS 8
S T+FVWS
Sbjct: 2279 SNTIFVWS 2286




8|Sequence|36|45|VWSCCHQQAE

>sp|L_DMSVA|RNA-DIRECTED RNA polymerase L|Drosophila melanogaster sigma virus (isolate

Query: 1 VWSCCHQQAE 10
VWSC QA+
Sbjct: 1081 VWSCSSTQAD 1090


>sp|VE1_MNPVA|REPLICATION protein E1|Mastomys natalensis papillomavirus (isolate African

Query: 1 VWSCCHQQAE 10
VW CC ++ E
Sbjct: 378 VWKCCREEPE 387


>sp|VF295_IIV3|UNCHARACTERIZED protein 016R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 VWSCCHQQAE 10
+W+ CH A+
Sbjct: 916 LWAACHAYAQ 925


>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I89A7|NUCLEOPROTEIN A virus (strain A/Equine/Jillin/1/1989

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I86A3|NUCLEOPROTEIN A virus (strain A/Equine/Tennessee/5/1986

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I86A2|NUCLEOPROTEIN A virus (strain A/Equine/Kentucky/2/1986

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I85A7|NUCLEOPROTEIN A virus (strain A/Ruddy

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I85A5|NUCLEOPROTEIN A virus (strain A/Equine/Santiago/1/1985

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I84A4|NUCLEOPROTEIN A virus (strain A/Gull/Astrakhan/227/1984

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I84A2|NUCLEOPROTEIN A virus (strain A/Whale/Maine/328/1984

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I83A5|NUCLEOPROTEIN A virus (strain A/Chicken/Pennsylvania/1/1983

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I83A4|NUCLEOPROTEIN A virus (strain A/Turkey/Ireland/1378/1983

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I82A1|NUCLEOPROTEIN A virus (strain A/Mallard/Astrakhan/263/1982

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I82A0|NUCLEOPROTEIN A virus (strain A/Mallard/Astrakhan/244/1982

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I80AD|NUCLEOPROTEIN A virus (strain A/Gull/Minnesota/945/1980

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I80AC|NUCLEOPROTEIN A virus (strain A/Gull/Massachusetts/26/1980

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I80A8|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/833/1980

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I80A6|NUCLEOPROTEIN A virus (strain A/Duck/Hokkaido/8/1980

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I79A8|NUCLEOPROTEIN A virus (strain A/Gull/Maryland/1815/1979

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I79A7|NUCLEOPROTEIN A virus (strain A/Grey

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I78AF|NUCLEOPROTEIN A virus (strain A/Gull/Maryland/1824/1978

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I78A5|NUCLEOPROTEIN A virus (strain A/Duck/Beijing/1/1978

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I77AG|NUCLEOPROTEIN A virus (strain A/Budgerigar/Hokkaido/1/1977

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I77AF|NUCLEOPROTEIN A virus (strain A/Gull/Maryland/704/1977

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I77AE|NUCLEOPROTEIN A virus (strain A/Gull/Maryland/5/1977

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I76AK|NUCLEOPROTEIN A virus (strain A/Duck/New

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I76AE|NUCLEOPROTEIN A virus (strain A/Whale/Pacific

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I76A0|NUCLEOPROTEIN A virus (strain A/Anas

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I74A2|NUCLEOPROTEIN A virus (strain A/Duck/Memphis/928/1974

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I73A0|NUCLEOPROTEIN A virus (strain A/Parrot/Ulster/1973

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I72A6|NUCLEOPROTEIN A virus (strain A/Tern/Turkmenia/18/1972

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I72A5|NUCLEOPROTEIN A virus (strain A/Shearwater/Australia/1972

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I69A1|NUCLEOPROTEIN A virus (strain A/Duck/Pennsylvania/1/1969

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I68A3|NUCLEOPROTEIN A virus (strain A/Turkey/Ontario/6118/1968

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I66A1|NUCLEOPROTEIN A virus (strain A/Turkey/Wisconsin/1/1966

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I66A0|NUCLEOPROTEIN A virus (strain A/Turkey/Ontario/7732/1966

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I63A2|NUCLEOPROTEIN A virus (strain A/Equine/Miami/1/1963

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I62A0|NUCLEOPROTEIN A virus (strain A/Duck/England/1/1962

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I61A0|NUCLEOPROTEIN A virus (strain A/Tern/South

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I60A2|NUCLEOPROTEIN A virus (strain A/Duck/Ukraine/2/1960

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I56A2|NUCLEOPROTEIN A virus (strain A/Duck/England/1/1956

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I56A1|NUCLEOPROTEIN A virus (strain A/Duck/Czechoslovakia/1956

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I53A0|NUCLEOPROTEIN A virus (strain A/Duck/Manitoba/1/1953

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I49A1|NUCLEOPROTEIN A virus (strain A/Duck/Germany/1949

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I49A0|NUCLEOPROTEIN A virus (strain A/Chicken/Germany/n/1949

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I34A0|NUCLEOPROTEIN A virus (strain A/Fowl

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSAA 337


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 1 VWSCCHQQAE 10
+W C +QA+
Sbjct: 1068 IWGCSAEQAD 1077


>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New

Query: 1 VWSCCHQQA 9
VW CH A
Sbjct: 329 VWMACHSPA 337


>sp|GL_ALHV1|ENVELOPE glycoprotein L|Alcelaphine herpesvirus 1 (strain C500)

Query: 4 CCHQQAE 10
CCHQ+ E
Sbjct: 30 CCHQKNE 36


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 1 VWSCCHQQAE 10
VW C QA+
Sbjct: 1068 VWKCSASQAD 1077


>sp|RDRP_WCMVO|RNA replication protein|White clover mosaic virus (strain

Query: 1 VWSCCHQQAE 10
+W+ C Q+ E
Sbjct: 956 LWTLCRQEIE 965


>sp|VE1_OVPVD|REPLICATION protein E1|Odocoileus virginianus papillomavirus 1 (DPV)

Query: 2 WSCCHQ 7
W+CCH+
Sbjct: 92 WACCHK 97


>sp|RDRP_WCMVM|RNA replication protein|White clover mosaic virus (strain

Query: 1 VWSCCHQQAE 10
+W+ C Q+ E
Sbjct: 956 LWTLCKQEIE 965


>sp|ENLYS_BPPA2|SAR-ENDOLYSIN phage PA-2 (Bacteriophage PA-2)

Query: 1 VWSCCH 6
VW+ CH
Sbjct: 48 VWTVCH 53


>sp|ENLYS_BPP21|SAR-ENDOLYSIN phage P21 (Bacteriophage 21)

Query: 1 VWSCCH 6
VW+ CH
Sbjct: 48 VWTVCH 53


>sp|TEG7_EBVG|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 WSCC 5
WSCC
Sbjct: 8 WSCC 11


>sp|TEG7_EBVB9|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 WSCC 5
WSCC
Sbjct: 8 WSCC 11


>sp|TEG7_EBVA8|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 WSCC 5
WSCC
Sbjct: 8 WSCC 11


>sp|1A_PZSVT|REPLICATION protein 1a|Pelargonium zonate spot virus (isolate

Query: 2 WSCCHQQA 9
+ CCHQ +
Sbjct: 946 FGCCHQAS 953


>sp|L_SVCV|RNA-DIRECTED RNA polymerase L|Spring viremia of carp virus

Query: 1 VWSCCHQQAE 10
+W C QA+
Sbjct: 1066 IWECSSTQAD 1075


>sp|POLG_AEVVR|GENOME polyprotein|Avian encephalomyelitis virus (strain Van

Query: 2 WSCCH 6
WS CH
Sbjct: 2047 WSICH 2051


>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 4 CCHQ 7
CCHQ
Sbjct: 621 CCHQ 624


>sp|POLG_AEVL2|GENOME polyprotein|Avian encephalomyelitis virus (strain L2Z)

Query: 2 WSCCH 6
WS CH
Sbjct: 2047 WSICH 2051


>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 4 CCHQ 7
CCHQ
Sbjct: 621 CCHQ 624


>sp|POLG_AEVCA|GENOME polyprotein|Avian encephalomyelitis virus (strain Calnek

Query: 2 WSCCH 6
WS CH
Sbjct: 2047 WSICH 2051


>sp|TEG1_GAHVM|TEGUMENT protein UL46 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 VWSCCH 6
+W+CC
Sbjct: 286 LWTCCQ 291




9|Sequence|41|50|HQQAEKKQKN

***** No hits found ******


10|Sequence|46|55|KKQKNPPYKF

>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 KKQKNPPYKF 10
K QK+PPYK+
Sbjct: 831 KFQKDPPYKW 840


>sp|L_BDV1|RNA-DIRECTED RNA polymerase L|Borna disease virus 1 (BoDV-1)

Query: 5 NPPYKF 10
NPPY F
Sbjct: 599 NPPYSF 604


>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 KKQKNPPY 8
+KQKN PY
Sbjct: 325 QKQKNNPY 332


>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 KKQKNPPY 8
+KQKN PY
Sbjct: 325 QKQKNNPY 332


>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3 QKNPPYKF 10
QK+PPY++
Sbjct: 831 QKDPPYRW 838


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 KKQKNPPYKF 10
K QK+PPY++
Sbjct: 831 KFQKDPPYRW 840


>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 KKQKNPPYKF 10
K QK+PP+K+
Sbjct: 831 KFQKDPPFKW 840


>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 KKQKNPPYKF 10
K QK+PP+K+
Sbjct: 830 KFQKDPPFKW 839


>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 KKQKNPPYKF 10
K QK+PPY++
Sbjct: 830 KFQKDPPYQW 839


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 5 NPPYKF 10
NPP+KF
Sbjct: 506 NPPHKF 511


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 KKQKNPPYKF 10
K QK+PPY++
Sbjct: 831 KFQKDPPYQW 840


>sp|POL_FIVT2|POL polyprotein|Feline immunodeficiency virus (isolate TM2)

Query: 1 KKQKNPPYKF 10
K Q+ PPYK+
Sbjct: 374 KLQEEPPYKW 383


>sp|NSP2_ROTA1|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Turkey/Ireland/Ty-1/1978/G7P[17])

Query: 2 KQKNPPYKF 10
+++NP YKF
Sbjct: 248 QKRNPSYKF 256


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 5 NPPYKF 10
NPP+KF
Sbjct: 506 NPPHKF 511


>sp|POL_FIVSD|POL polyprotein|Feline immunodeficiency virus (strain San

Query: 1 KKQKNPPYKF 10
K Q+ PPYK+
Sbjct: 375 KLQEEPPYKW 384


>sp|L_LNYV3|RNA-DIRECTED RNA polymerase L|Lettuce necrotic yellows virus (isolate

Query: 4 KNPPY 8
KNPPY
Sbjct: 1132 KNPPY 1136


>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3 QKNPPYKF 10
QK+PP+K+
Sbjct: 831 QKDPPFKW 838


>sp|POL_SIVVT|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 1 KKQKNPPYKF 10
K QK PPY++
Sbjct: 838 KMQKEPPYEW 847


>sp|POL_SIVVG|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 1 KKQKNPPYKF 10
K QK PPY++
Sbjct: 835 KVQKKPPYEW 844


>sp|GB_MUHVS|ENVELOPE glycoprotein B|Murid herpesvirus 1 (strain Smith)

Query: 1 KKQKNPPYKF 10
K + N PY+F
Sbjct: 271 KARSNTPYEF 280


>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 KKQKNPPYKF 10
K QK+PPY +
Sbjct: 832 KFQKDPPYHW 841




11|Sequence|51|60|PPYKFIHMLK

>sp|YL284_MIMIV|PUTATIVE ankyrin repeat protein L284|Acanthamoeba polyphaga mimivirus

Query: 1 PPYKFIHMLK 10
PPY F H L+
Sbjct: 49 PPYYFGHYLR 58


>sp|NCAP_ARV|NUCLEOPROTEIN River virus (ARV)

Query: 3 YKFIHML 9
Y FIHML
Sbjct: 296 YSFIHML 302


>sp|A1_BPT5|PROTEIN A1|Escherichia phage T5 (Enterobacteria phage

Query: 1 PPYKFIH 7
P Y+F+H
Sbjct: 333 PKYQFVH 339




12|Sequence|56|65|IHMLKGISIY

>sp|CAPSD_PAVBP|MINOR capsid protein VP1|Bovine parvovirus 1 (BPV-1)

Query: 2 HMLKGISIY 10
H+LKG+ +Y
Sbjct: 352 HLLKGVPLY 360


>sp|209R_IIV6|UNCHARACTERIZED protein 209R|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 HMLKGISIY 10
HM+KG+ Y
Sbjct: 378 HMIKGLDSY 386


>sp|TRM1_PSHV1|TRIPARTITE terminase subunit 1|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 IHMLKGISIY 10
+H L G+S+Y
Sbjct: 155 LHSLVGLSLY 164




13|Sequence|61|70|GISIYPETLS

>sp|ENDO1_BPT5|PUTATIVE endonuclease|Escherichia phage T5 (Enterobacteria phage

Query: 1 GISIYPE 7
GIS+YPE
Sbjct: 193 GISLYPE 199


>sp|POLN_AHEV|NON-STRUCTURAL polyprotein pORF1|Avian hepatitis E virus (isolate

Query: 1 GISIYPETL 9
GIS +P+TL
Sbjct: 1242 GISAWPKTL 1250


>sp|VF295_IIV3|UNCHARACTERIZED protein 016R|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 ISIYPETLS 10
+ +YPET+S
Sbjct: 264 VYVYPETIS 272


>sp|TRX1_GAHVM|TRIPLEX capsid protein 1|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 3 SIYPETLS 10
S+YP+TL+
Sbjct: 14 SLYPDTLN 21


>sp|VSR_RGDV|SUPPRESSOR of RNA-mediated gene silencing|Rice gall dwarf virus (RGDV)

Query: 1 GISIYPE 7
GIS+YP+
Sbjct: 342 GISLYPD 348




14|Sequence|66|75|PETLSNKKKI

>sp|VP7_ROTBS|OUTER capsid glycoprotein VP7|Rotavirus C (isolate

Query: 1 PETLSNKKKI 10
PETL+N + I
Sbjct: 148 PETLANSETI 157




15|Sequence|71|80|NKKKIIKVRR

>sp|NS1AB_TASV1|NON-STRUCTURAL polyprotein 1AB|Turkey astrovirus 1 (TAstV-1)

Query: 1 NKKKIIKVRR 10
NKK I+K +R
Sbjct: 1011 NKKDIVKTKR 1020


>sp|NS1A_TASV1|NON-STRUCTURAL polyprotein 1A|Turkey astrovirus 1 (TAstV-1)

Query: 1 NKKKIIKVRR 10
NKK I+K +R
Sbjct: 1011 NKKDIVKTKR 1020




16|Sequence|76|85|IKVRRDKDGP

>sp|ENV_SIVMB|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate MB66)

Query: 1 IKVRRDKDGP 10
I RRD+D P
Sbjct: 738 IPARRDRDRP 747


>sp|IKBL_ASFM2|IKB-LIKE protein|African swine fever virus (isolate

Query: 4 RRDKDG 9
RRDKDG
Sbjct: 83 RRDKDG 88


>sp|IKBL_ASFWA|IKB-LIKE protein|African swine fever virus (isolate

Query: 4 RRDKDG 9
RRDKDG
Sbjct: 82 RRDKDG 87


>sp|IKBL_ASFB7|IKB-LIKE protein|African swine fever virus (strain

Query: 4 RRDKDG 9
RRDKDG
Sbjct: 82 RRDKDG 87


>sp|POLG_RTSVA|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 1 IKVRRDKDGP 10
+KV RD D P
Sbjct: 1902 VKVERDPDVP 1911


>sp|IKBL_ASFK5|IKB-LIKE protein|African swine fever virus (isolate

Query: 4 RRDKDG 9
RRDKDG
Sbjct: 83 RRDKDG 88


>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 1 IKVRRDKDGP 10
+KV RD D P
Sbjct: 1899 VKVERDPDVP 1908


>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 2 KVRRDKDGP 10
K +RDKD P
Sbjct: 507 KKKRDKDAP 515




17|Sequence|81|90|DKDGPGREGG

>sp|POLG_BOVEV|GENOME polyprotein|Bovine enterovirus (strain VG-5-27) (BEV)

Query: 1 DKDGPGREGG 10
D+ PG EGG
Sbjct: 210 DRTMPGSEGG 219


>sp|POLG_BECN1|GENOME polyprotein|Bovine enteric calicivirus Newbury agent-1

Query: 1 DKDGPGREGG 10
D +GP +EGG
Sbjct: 295 DGNGPKQEGG 304


>sp|POLG_BECNB|GENOME polyprotein|Bovine enteric calicivirus NB (isolate

Query: 1 DKDGPGREGG 10
D GP +EGG
Sbjct: 295 DGSGPKQEGG 304


>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)

Query: 1 DKDGPGREGG 10
D G G EGG
Sbjct: 823 DASGEGEEGG 832


>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)

Query: 1 DKDGPGREGG 10
D G G EGG
Sbjct: 824 DASGEGEEGG 833


>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)

Query: 1 DKDGPGREGG 10
D G G EGG
Sbjct: 824 DASGEGEEGG 833


>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)

Query: 1 DKDGPGREGG 10
D G G EGG
Sbjct: 824 DASGEGEEGG 833




18|Sequence|86|95|GREGGRRNLL

>sp|Y021_OSHVF|UNCHARACTERIZED protein ORF21|Ostreid herpesvirus 1 (isolate France)

Query: 2 REGGRRNLL 10
R GG+RNLL
Sbjct: 890 RSGGQRNLL 898


>sp|PK1_ASFM2|SERINE/THREONINE-PROTEIN kinase 1|African swine fever virus (isolate

Query: 3 EGGRRN 8
EGGRRN
Sbjct: 46 EGGRRN 51


>sp|PK1_ASFK5|SERINE/THREONINE-PROTEIN kinase 1|African swine fever virus (isolate

Query: 3 EGGRRN 8
EGGRRN
Sbjct: 46 EGGRRN 51


>sp|NS1_PAVPN|INITIATOR protein NS1|Porcine parvovirus (strain NADL-2) (PPV)

Query: 2 REGGRRNLL 10
R+GG+RN +
Sbjct: 386 RQGGKRNTI 394


>sp|NS1_PAVPK|INITIATOR protein NS1|Porcine parvovirus (strain Kresse) (PPV)

Query: 2 REGGRRNLL 10
R+GG+RN +
Sbjct: 386 RQGGKRNTI 394


>sp|NS1_PAVL3|INITIATOR protein NS1|Parvovirus LuIII

Query: 2 REGGRRN 8
R+GG+RN
Sbjct: 387 RQGGKRN 393


>sp|NS1_PAVHH|INITIATOR protein NS1|Hamster parvovirus H1

Query: 2 REGGRRN 8
R+GG+RN
Sbjct: 387 RQGGKRN 393


>sp|NS1_PAVCN|INITIATOR protein NS1|Canine parvovirus type 2 (isolate

Query: 2 REGGRRN 8
R+GG+RN
Sbjct: 388 RQGGKRN 394


>sp|NS1_MUMIP|INITIATOR protein NS1|Murine minute virus (strain MVM

Query: 2 REGGRRN 8
R+GG+RN
Sbjct: 387 RQGGKRN 393


>sp|NS1_MUMIM|INITIATOR protein NS1|Murine minute virus (strain MVMi)

Query: 2 REGGRRN 8
R+GG+RN
Sbjct: 387 RQGGKRN 393


>sp|NS1_MEVA|INITIATOR protein NS1|Mink enteritis virus (strain Abashiri)

Query: 2 REGGRRN 8
R+GG+RN
Sbjct: 388 RQGGKRN 394


>sp|NS1_FPV19|INITIATOR protein NS1|Feline panleukopenia virus (strain 193)

Query: 2 REGGRRN 8
R+GG+RN
Sbjct: 388 RQGGKRN 394


>sp|NS1_FPV|INITIATOR protein NS1|Feline panleukopenia virus (FPV)

Query: 2 REGGRRN 8
R+GG+RN
Sbjct: 112 RQGGKRN 118


>sp|NEC1_EHV1B|NUCLEAR egress protein 1|Equine herpesvirus 1 (strain Ab4p)

Query: 1 GREGGRRN 8
GRE GRR+
Sbjct: 28 GRENGRRS 35


>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)

Query: 2 REGGRRN 8
++GGRRN
Sbjct: 481 KKGGRRN 487


>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 GREGGRRNL 9
G E RRNL
Sbjct: 346 GNESSRRNL 354


>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 GREGGRRNL 9
G E RRNL
Sbjct: 346 GNESSRRNL 354


>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 GREGGRRNL 9
G E RRNL
Sbjct: 346 GNESSRRNL 354


>sp|VP2_BTV10|OUTER capsid protein VP2|Bluetongue virus 10 (isolate USA)

Query: 3 EGGRRNLL 10
EGG+ NL+
Sbjct: 35 EGGKHNLI 42


>sp|074L_FRG3G|UNCHARACTERIZED protein 074L|Frog virus 3 (isolate Goorha)

Query: 4 GGRRNLL 10
GGRRN+L
Sbjct: 259 GGRRNVL 265


Query: 4 GGRRNLL 10
GGRRN+L
Sbjct: 290 GGRRNVL 296




19|Sequence|91|100|RRNLLVDAAE

>sp|RDRP_MPRVN|RNA-DIRECTED RNA polymerase VP2|Micromonas pusilla reovirus (isolate

Query: 2 RNLLVDAAE 10
RN+L+DA E
Sbjct: 742 RNVLIDALE 750




20|Sequence|96|105|VDAAEAGLLS

***** No hits found ******


21|Sequence|101|110|AGLLSRDKDP

>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2 GLLSRDKDP 10
G LSR+K P
Sbjct: 2875 GFLSRNKKP 2883


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2 GLLSRDKDP 10
G LSR+K P
Sbjct: 2875 GFLSRNKKP 2883


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2 GLLSRDKDP 10
G LSR+K P
Sbjct: 2874 GFLSRNKKP 2882


>sp|VG50_BPMB2|PUTATIVE adenosylcobalamin-dependent ribonucleoside-triphosphate

Query: 1 AGLLSRDKDP 10
AG+LS + DP
Sbjct: 149 AGVLSTEYDP 158




22|Sequence|106|115|RDKDPRGPSS

>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 1 RDKDPRGPSS 10
RD P GPSS
Sbjct: 691 RDNPPEGPSS 700


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 1 RDKDPRGPSS 10
RD P GPSS
Sbjct: 691 RDNPPEGPSS 700


>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate

Query: 2 DKDPRGPSS 10
D++PRGP S
Sbjct: 186 DENPRGPVS 194


>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain

Query: 2 DKDPRGPSS 10
D++PRGP S
Sbjct: 186 DENPRGPVS 194


>sp|PRIM_ALHV1|DNA primase|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 RDKDPRGP 8
+ +DPRGP
Sbjct: 680 QSQDPRGP 687


>sp|POLG_AEVCA|GENOME polyprotein|Avian encephalomyelitis virus (strain Calnek

Query: 2 DKDPRGP 8
DK+P+GP
Sbjct: 508 DKEPQGP 514


>sp|POLG_AEVL2|GENOME polyprotein|Avian encephalomyelitis virus (strain L2Z)

Query: 2 DKDPRGP 8
DK+P+GP
Sbjct: 508 DKEPQGP 514


>sp|POLG_AEVVR|GENOME polyprotein|Avian encephalomyelitis virus (strain Van

Query: 2 DKDPRGP 8
DK+P+GP
Sbjct: 508 DKEPQGP 514


>sp|VIF_SIVTN|VIRION infectivity factor|Simian immunodeficiency virus (isolate TAN1)

Query: 1 RDKDPRGP 8
+DK P+GP
Sbjct: 158 QDKQPKGP 165


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 1 RDKDPRGPSS 10
R+ P GPSS
Sbjct: 691 REYPPEGPSS 700


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 1 RDKDPRGPSS 10
R+ P GPSS
Sbjct: 691 REYPPEGPSS 700


>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 1 RDKDPRGPSS 10
RD P GPS+
Sbjct: 54 RDAPPEGPSA 63


>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 1 RDKDPRGPSS 10
RD P GPS+
Sbjct: 54 RDAPPEGPSA 63


>sp|GH_EHV4|ENVELOPE glycoprotein H|Equine herpesvirus 4 (strain 1942)

Query: 4 DPRGP 8
DPRGP
Sbjct: 119 DPRGP 123


>sp|CAPSD_TASV1|CAPSID polyprotein VP90|Turkey astrovirus 1 (TAstV-1)

Query: 2 DKDPRGPSS 10
D+ PRGP++
Sbjct: 288 DRGPRGPNA 296


>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5 PRGPSS 10
PRGPSS
Sbjct: 446 PRGPSS 451


>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5 PRGPSS 10
PRGPSS
Sbjct: 447 PRGPSS 452


>sp|GH_EHV1B|ENVELOPE glycoprotein H|Equine herpesvirus 1 (strain Ab4p)

Query: 4 DPRGP 8
DPRGP
Sbjct: 112 DPRGP 116


>sp|GH_EHV1|ENVELOPE glycoprotein H|Equine herpesvirus 1 (strain HVS25A)

Query: 4 DPRGP 8
DPRGP
Sbjct: 112 DPRGP 116


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5 PRGPSS 10
PRGPSS
Sbjct: 446 PRGPSS 451


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5 PRGPSS 10
PRGPSS
Sbjct: 445 PRGPSS 450


>sp|LTP_PSHV1|LARGE tegument protein deneddylase|Psittacid herpesvirus 1 (isolate Amazon

Query: 4 DPRGPSS 10
+PRGPS+
Sbjct: 2571 EPRGPST 2577




23|Sequence|111|120|RGPSSGSCID

>sp|NS1_INBYA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Yamagata/1/1973)

Query: 3 PSSGSCID 10
P+SG C+D
Sbjct: 123 PTSGKCLD 130


>sp|RIR1_FRG3G|PUTATIVE ribonucleoside-diphosphate reductase large subunit|Frog virus 3

Query: 1 RGPSSGSC 8
RGPS+ SC
Sbjct: 112 RGPSAKSC 119


>sp|POLG_PVYC|GENOME polyprotein|Potato virus Y (strain C)

Query: 1 RGPSSGSCID 10
R PS +CID
Sbjct: 302 RYPSDHTCID 311


>sp|RDRP_GLVWB|PROBABLE RNA-directed RNA polymerase|Giardia lamblia virus (isolate Wang)

Query: 2 GPSSGSC 8
GP SG+C
Sbjct: 295 GPGSGNC 301


>sp|CAPSD_GLVWB|MAJOR capsid protein|Giardia lamblia virus (isolate Wang)

Query: 2 GPSSGSC 8
GP SG+C
Sbjct: 295 GPGSGNC 301


>sp|TEG1_EHV4|TEGUMENT protein UL46 homolog|Equine herpesvirus 4 (strain 1942)

Query: 3 PSSGSCI 9
PSSG CI
Sbjct: 714 PSSGGCI 720


>sp|L_SVCV|RNA-DIRECTED RNA polymerase L|Spring viremia of carp virus

Query: 3 PSSGSC 8
PSSG+C
Sbjct: 1942 PSSGAC 1947


>sp|Y15K_HBVD3|PUTATIVE uncharacterized 15.3 kDa protein|Hepatitis B virus genotype D

Query: 1 RGPSSGSCI 9
+ P+SG C+
Sbjct: 19 QAPASGGCV 27


>sp|NCAP_PPRV|NUCLEOPROTEIN virus (PPRV)

Query: 2 GPSSGS 7
GPSSGS
Sbjct: 135 GPSSGS 140




24|Sequence|116|125|GSCIDQLPIK

>sp|RDRP_CMVQ|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain Q)

Query: 2 SCIDQLPI 9
SCIDQL I
Sbjct: 701 SCIDQLSI 708


>sp|RDRP_CMVY|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain Y)

Query: 2 SCIDQLPI 9
SCIDQL I
Sbjct: 705 SCIDQLSI 712


>sp|RDRP_CMVKO|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain Kor)

Query: 2 SCIDQLPI 9
SCIDQL I
Sbjct: 705 SCIDQLSI 712


>sp|RDRP_CMVII|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain Iizuka)

Query: 2 SCIDQLPI 9
SCIDQL I
Sbjct: 705 SCIDQLSI 712


>sp|RDRP_CMVMB|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain MB-8)

Query: 2 SCIDQLPI 9
SCIDQL I
Sbjct: 705 SCIDQLSI 712


>sp|RDRP_CMVFN|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain FNY)

Query: 2 SCIDQLPI 9
SCIDQL I
Sbjct: 705 SCIDQLSI 712


>sp|RDRP_CMVB|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain B)

Query: 2 SCIDQLPI 9
SCIDQL I
Sbjct: 705 SCIDQLSI 712


>sp|POLG_PVYC|GENOME polyprotein|Potato virus Y (strain C)

Query: 2 SCIDQLPIK 10
+CID LP++
Sbjct: 308 TCIDGLPVE 316


>sp|RDRP_CMVNT|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain NT9)

Query: 2 SCIDQLPI 9
SCIDQL +
Sbjct: 705 SCIDQLSL 712


>sp|RDRP_CMVK|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain K)

Query: 2 SCIDQLPI 9
SCIDQL +
Sbjct: 705 SCIDQLSL 712


>sp|RDRP_CMVIX|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain Ixora)

Query: 2 SCIDQLPI 9
SCIDQL +
Sbjct: 705 SCIDQLSL 712


>sp|RDRP_CMVAS|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain As)

Query: 2 SCIDQLPI 9
SCIDQL +
Sbjct: 705 SCIDQLSL 712


>sp|P26_BNYVS|PROTEIN P26|Beet necrotic yellow vein virus

Query: 1 GSCIDQLP 8
G C+D LP
Sbjct: 214 GQCLDDLP 221


>sp|LTP_EHV2|LARGE tegument protein deneddylase|Equine herpesvirus 2 (strain 86/87)

Query: 1 GSCIDQLP 8
G+CI +LP
Sbjct: 258 GACIRELP 265




25|Sequence|121|130|QLPIKMDYGE

>sp|LMBD2_REOVL|OUTER capsid protein lambda-2|Reovirus type 1 (strain Lang)

Query: 1 QLPIKMDYG 9
QLP++ DYG
Sbjct: 419 QLPLRPDYG 427


>sp|LMBD2_REOVD|OUTER capsid protein lambda-2|Reovirus type 3 (strain Dearing)

Query: 1 QLPIKMDYG 9
QLP++ DYG
Sbjct: 419 QLPLRPDYG 427


>sp|TMP_BPPCD|PROBABLE tape measure protein|Clostridium phage phiCD119 (strain Clostridium

Query: 1 QLPIKMDYG 9
QLP K+ YG
Sbjct: 639 QLPAKIGYG 647


>sp|V206_FOWPN|G-PROTEIN coupled receptor homolog FPV206|Fowlpox virus (strain NVSL) (FPV)

Query: 2 LPIKMDY 8
LP+K+DY
Sbjct: 69 LPLKIDY 75


>sp|LMBD2_REOVJ|OUTER capsid protein lambda-2|Reovirus type 2 (strain D5/Jones)

Query: 1 QLPIKMDYG 9
QLP++ +YG
Sbjct: 418 QLPLRPEYG 426


>sp|DPOZ_BPPMB|DNA polymerase DpoZ|Salmonella phage PMBT28

Query: 1 QLPIKMDYG 9
++PI++D+G
Sbjct: 600 RVPIRIDFG 608


>sp|GC_HHV11|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain 17)

Query: 2 LPIKMDYGE 10
LPI DY E
Sbjct: 431 LPISYDYSE 439


>sp|GC_HHV1K|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain KOS)

Query: 2 LPIKMDYGE 10
LPI DY E
Sbjct: 431 LPISYDYSE 439


>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)

Query: 2 LPIKMDYG 9
+PI++D+G
Sbjct: 152 IPIQLDFG 159


>sp|REP_BPHC1|REPLICATION protein|Haemophilus phage HP1 (strain HP1c1)

Query: 3 PIKMDY 8
PIK+DY
Sbjct: 616 PIKLDY 621


>sp|VF179_IIV3|UNCHARACTERIZED protein 035R|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 LPIKMDYGE 10
+P+ +DYG+
Sbjct: 745 IPVMIDYGK 753


>sp|RP22_FOWPN|DNA-DIRECTED RNA polymerase 22 kDa|Fowlpox virus (strain NVSL) (FPV)

Query: 3 PIKMDYGE 10
PI+ DYG+
Sbjct: 74 PIEYDYGD 81




26|Sequence|126|135|MDYGEELRSP

>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 YGEELRSP 10
YGE++R+P
Sbjct: 179 YGEQMRTP 186


>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 YGEELRSP 10
YGE++R+P
Sbjct: 179 YGEQMRTP 186


>sp|RDRP_LRVLG|PROBABLE RNA-directed RNA polymerase|Leishmania RNA virus 1 -

Query: 3 YGEELRSP 10
Y EELR P
Sbjct: 319 YSEELRRP 326


>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B

Query: 1 MDYGEELRSP 10
+DYGE L P
Sbjct: 1900 IDYGENLTIP 1909


>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A

Query: 1 MDYGEELRSP 10
+DYGE L P
Sbjct: 1900 IDYGENLTIP 1909


>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus

Query: 1 MDYGEELRSP 10
+DYGE L P
Sbjct: 1900 IDYGENLTIP 1909


>sp|L_BRSVA|RNA-DIRECTED RNA polymerase L|Bovine respiratory syncytial virus (strain

Query: 1 MDYGEELRSP 10
+DYGE L P
Sbjct: 1896 IDYGENLTIP 1905


>sp|FIBP_BPT4|LONG-TAIL fiber proximal subunit|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 MDYGEELRSP 10
++ GEE++SP
Sbjct: 1179 LERGEEVKSP 1188


>sp|PRIM_MUHVS|DNA primase|Murid herpesvirus 1 (strain Smith)

Query: 1 MDYGEELRSP 10
+DYG+ +R P
Sbjct: 614 VDYGDAVRRP 623




27|Sequence|131|140|ELRSPITSLT

>sp|Y221_AFV1Y|UNCHARACTERIZED protein ORF221|Acidianus filamentous virus 1 (isolate

Query: 2 LRSPITSL 9
+RSPIT L
Sbjct: 5 IRSPITEL 12




28|Sequence|136|145|ITSLTPGESK

>sp|POL2_SQMVM|RNA2 polyprotein|Squash mosaic virus (strain melon)

Query: 3 SLTPGESK 10
+LTPGE+K
Sbjct: 170 TLTPGENK 177


>sp|TAILC_BPSK2|MAJOR tail tube protein|Serratia phage KSP20 (Serratia marcescens

Query: 1 ITSLTPGESK 10
IT + PGE+K
Sbjct: 107 ITEIDPGEAK 116




29|Sequence|141|150|PGESKTTSPS

***** No hits found ******


30|Sequence|146|155|TTSPSSPEED

>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)

Query: 2 TSPSSPEED 10
+SPS+P+ED
Sbjct: 601 SSPSAPQED 609


>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)

Query: 2 TSPSSPEED 10
+SPS+P+ED
Sbjct: 601 SSPSAPQED 609


>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)

Query: 2 TSPSSPEED 10
+SPS+P+ED
Sbjct: 601 SSPSAPQED 609


>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)

Query: 2 TSPSSPEED 10
+SPS+P+ED
Sbjct: 601 SSPSAPQED 609


>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)

Query: 2 TSPSSPEED 10
+SPS+P+ED
Sbjct: 601 SSPSAPQED 609


>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1 TTSPSSPE 8
TTSPS P+
Sbjct: 122 TTSPSGPD 129


>sp|E320_ADE1P|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 11

Query: 2 TSPSSPEE 9
TSP++P+E
Sbjct: 126 TSPTTPDE 133


>sp|Y088_OSHVF|PUTATIVE transmembrane protein ORF88|Ostreid herpesvirus 1 (isolate France)

Query: 1 TTSPSSPEED 10
TT+ SPEED
Sbjct: 672 TTNAPSPEED 681


>sp|E320_ADE35|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 35

Query: 2 TSPSSPEE 9
TSP++P+E
Sbjct: 126 TSPTTPDE 133


>sp|VG12_GAHVM|UNCHARACTERIZED gene 12 protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 3 SPSSPEED 10
SPS PEED
Sbjct: 245 SPSPPEED 252




31|Sequence|151|160|SPEEDVMLGS

>sp|GCVK_SHV21|PROBABLE ganciclovir kinase|Saimiriine herpesvirus 2 (strain 11)

Query: 2 PEEDVMLGS 10
P+ED +LGS
Sbjct: 79 PQEDAVLGS 87


>sp|GI_VZVO|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Oka vaccine)

Query: 1 SPEEDVML 8
+PE DVML
Sbjct: 322 TPESDVML 329


>sp|GI_VZVD|ENVELOPE glycoprotein I|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 SPEEDVML 8
+PE DVML
Sbjct: 322 TPESDVML 329


>sp|SPIKE_CVPMI|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 SPEEDVMLG 9
SP DV+LG
Sbjct: 48 SPNSDVVLG 56


>sp|SPIKE_CVPFS|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 1 SPEEDVMLG 9
SP DV+LG
Sbjct: 48 SPNSDVVLG 56


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 3 EEDVMLGS 10
EEDV LGS
Sbjct: 2773 EEDVCLGS 2780


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 3 EEDVMLGS 10
EEDV LGS
Sbjct: 2784 EEDVNLGS 2791


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 3 EEDVMLGS 10
EEDV LGS
Sbjct: 2779 EEDVNLGS 2786


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 3 EEDVMLGS 10
EEDV LGS
Sbjct: 2783 EEDVNLGS 2790


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 3 EEDVMLGS 10
EEDV LGS
Sbjct: 2780 EEDVNLGS 2787


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 3 EEDVMLGS 10
EEDV LGS
Sbjct: 2784 EEDVNLGS 2791


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 3 EEDVMLGS 10
EEDV LGS
Sbjct: 2783 EEDVNLGS 2790


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 3 EEDVMLGS 10
EEDV LGS
Sbjct: 2782 EEDVNLGS 2789


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 3 EEDVMLGS 10
EEDV LGS
Sbjct: 2782 EEDVNLGS 2789


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 3 EEDVMLGS 10
EEDV LGS
Sbjct: 2782 EEDVNLGS 2789


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 3 EEDVMLGS 10
EEDV LGS
Sbjct: 2782 EEDVNLGS 2789


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 3 EEDVMLGS 10
EEDV LGS
Sbjct: 2774 EEDVNLGS 2781


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 3 EEDVMLGS 10
EEDV LGS
Sbjct: 2774 EEDVNLGS 2781


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 3 EEDVMLGS 10
EEDV LGS
Sbjct: 2770 EEDVNLGS 2777


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 3 EEDVMLGS 10
EEDV LGS
Sbjct: 2775 EEDVDLGS 2782


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 3 EEDVMLGS 10
EEDV LGS
Sbjct: 2775 EEDVDLGS 2782




32|Sequence|156|165|VMLGSLTFSV

>sp|DPOL_NPVAC|DNA polymerase|Autographa californica nuclear polyhedrosis virus

Query: 3 LGSLTFSV 10
LGS+TF V
Sbjct: 657 LGSITFKV 664




33|Sequence|161|170|LTFSVDYNFP

>sp|UNG_EBVB9|URACIL-DNA glycosylase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 LTFSVDYNFP 10
L FSV Y FP
Sbjct: 101 LAFSVAYGFP 110


>sp|TGB1_BNYVS|MOVEMENT protein TGB1|Beet necrotic yellow vein virus

Query: 4 SVDYNFP 10
+V+YNFP
Sbjct: 227 AVNYNFP 233


>sp|POL1_BRSV|RNA1 polyprotein|Beet ringspot virus (BRSV) (Tomato

Query: 1 LTFSVDYNFP 10
LTF VDY FP
Sbjct: 369 LTFMVDY-FP 377


>sp|RDRP_OLV2I|RNA-DIRECTED RNA polymerase 2a|Olive latent virus 2 (isolate

Query: 3 FSVDYNFP 10
FS+D NFP
Sbjct: 440 FSLDLNFP 447


>sp|VP7_RRSVT|MICROTUBULE-ASSOCIATED protein VP7|Rice ragged stunt virus (isolate

Query: 3 FSVDYNFP 10
FS++YN P
Sbjct: 213 FSLNYNHP 220




34|Sequence|166|175|DYNFPKKALV

>sp|POLG_PEV9U|GENOME polyprotein|Porcine enterovirus 9 (strain UKG/410/73)

Query: 2 YNFPKKA 8
YNFP KA
Sbjct: 1662 YNFPTKA 1668


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 2 YNFPKKA 8
YNFP KA
Sbjct: 1686 YNFPTKA 1692


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 2 YNFPKKA 8
YNFP KA
Sbjct: 1686 YNFPTKA 1692


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 2 YNFPKKA 8
YNFP KA
Sbjct: 1686 YNFPTKA 1692


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 2 YNFPKKA 8
YNFP KA
Sbjct: 1686 YNFPTKA 1692


>sp|REPA_BPPHS|REPLICATION-ASSOCIATED protein A|Enterobacteria phage phiX174 (Isolate Sanger)

Query: 1 DYNFPKK 7
+YN+PKK
Sbjct: 151 EYNYPKK 157


>sp|VGA_BPS13|A' protein|Enterobacteria phage S13 (Bacteriophage S13)

Query: 1 DYNFPKK 7
+YN+PKK
Sbjct: 160 EYNYPKK 166


>sp|YO13_ADEG1|UNCHARACTERIZED protein ORF13|Fowl adenovirus A serotype 1

Query: 2 YNFPKKALV 10
+NFP K L+
Sbjct: 96 WNFPSKNLI 104


>sp|VF295_IIV6|UNCHARACTERIZED protein 295L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 DYNFPKK 7
D NFPKK
Sbjct: 145 DLNFPKK 151


>sp|YL127_MIMIV|PUTATIVE F-box protein L127|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DYNFPKKALV 10
++NFPK L+
Sbjct: 243 NFNFPKTKLL 252




35|Sequence|171|180|KKALVVTIQE

>sp|ETFL_ASFM2|EARLY transcription factor large subunit|African swine fever virus

Query: 1 KKALVVTIQ 9
KKA ++TIQ
Sbjct: 389 KKAFILTIQ 397


>sp|ETFL_ASFK5|EARLY transcription factor large subunit|African swine fever virus

Query: 1 KKALVVTIQ 9
KKA ++TIQ
Sbjct: 389 KKAFILTIQ 397


>sp|EFTL_ASFP4|EARLY transcription factor large subunit|African swine fever virus

Query: 1 KKALVVTIQ 9
KKA ++TIQ
Sbjct: 389 KKAFILTIQ 397


>sp|VF134_ASFWA|EARLY transcription factor large subunit|African swine fever virus

Query: 1 KKALVVTIQ 9
KKA ++TIQ
Sbjct: 389 KKAFILTIQ 397


>sp|ETFL_ASFB7|EARLY transcription factor large subunit|African swine fever virus

Query: 1 KKALVVTIQ 9
KKA ++TIQ
Sbjct: 389 KKAFILTIQ 397


>sp|NINB_LAMBD|PROTEIN ninB|Escherichia phage lambda (Bacteriophage lambda)

Query: 2 KALVVTIQE 10
K +VVTIQE
Sbjct: 30 KPIVVTIQE 38


>sp|NINB_BPP22|PROTEIN ninB|Salmonella phage P22 (Bacteriophage P22)

Query: 2 KALVVTIQE 10
K +VVTIQE
Sbjct: 30 KPIVVTIQE 38


>sp|NINB_BPP21|PROTEIN ninB|Enterobacteria phage P21 (Bacteriophage 21)

Query: 2 KALVVTIQE 10
K +VVTIQE
Sbjct: 30 KPIVVTIQE 38




36|Sequence|176|185|VTIQEAHGLP

>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 2 TIQEAHGLP 10
+ Q AHGLP
Sbjct: 1815 SFQSAHGLP 1823


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 2 TIQEAHGLP 10
+ Q AHGLP
Sbjct: 1815 SFQSAHGLP 1823


>sp|POLG_PSBMV|GENOME polyprotein|Pea seed-borne mosaic virus (strain

Query: 2 TIQEAHGLP 10
TI++ H LP
Sbjct: 2214 TIEKTHSLP 2222




37|Sequence|181|190|AHGLPVMDDQ

>sp|MATRX_SENDH|MATRIX protein|Sendai virus (strain Harris) (SeV)

Query: 4 LPVMDDQ 10
LPV+DDQ
Sbjct: 218 LPVLDDQ 224


>sp|MATRX_SENDF|MATRIX protein|Sendai virus (strain Fushimi) (SeV)

Query: 4 LPVMDDQ 10
LPV+DDQ
Sbjct: 218 LPVLDDQ 224


>sp|MATRX_SENDE|MATRIX protein|Sendai virus (strain Enders) (SeV)

Query: 4 LPVMDDQ 10
LPV+DDQ
Sbjct: 218 LPVLDDQ 224


>sp|MATRX_SENDZ|MATRIX protein|Sendai virus (strain Z) (SeV)

Query: 4 LPVMDDQ 10
LPV+DDQ
Sbjct: 218 LPVLDDQ 224


>sp|MATRX_SENDO|MATRIX protein|Sendai virus (strain Ohita) (SeV)

Query: 4 LPVMDDQ 10
LPV+DDQ
Sbjct: 218 LPVLDDQ 224


>sp|MATRX_SENDA|MATRIX protein|Sendai virus (strain Hamamatsu) (SeV)

Query: 4 LPVMDDQ 10
LPV+DDQ
Sbjct: 218 LPVLDDQ 224


>sp|VP6_APRVF|MICROTUBULE-ASSOCIATED protein VP6|Aedes pseudoscutellaris reovirus (isolate France)

Query: 2 HGLPVMD 8
HG+PVM+
Sbjct: 276 HGVPVMN 282


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 2 HGLPVMD 8
HGLP++D
Sbjct: 1849 HGLPLVD 1855


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 2 HGLPVMD 8
HGLP++D
Sbjct: 1849 HGLPLVD 1855


>sp|POLG_PSBMV|GENOME polyprotein|Pea seed-borne mosaic virus (strain

Query: 1 AHGLPVM 7
A+GLPVM
Sbjct: 1657 AYGLPVM 1663


>sp|POLG_BYMV|GENOME polyprotein|Bean yellow mosaic virus

Query: 1 AHGLPVM 7
A+GLPVM
Sbjct: 1533 AYGLPVM 1539


>sp|PP220_ASFK5|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 2 HGLPVMD-DQ 10
HGLPV D DQ
Sbjct: 2277 HGLPVPDPDQ 2286


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 2 HGLPVMDD 9
H +PV+DD
Sbjct: 2012 HNVPVVDD 2019


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 2 HGLPVMDD 9
H +PV+DD
Sbjct: 2012 HNVPVVDD 2019


>sp|CAPSD_BPAL3|CAPSID protein F|Escherichia phage alpha3 (Bacteriophage alpha-3)

Query: 2 HGLPVMDD 9
HG P +DD
Sbjct: 367 HGFPFLDD 374


>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 1 AHGLPVMDDQ 10
+HGLPV D+
Sbjct: 780 SHGLPVSQDK 789


>sp|EXLYS_BPT7|PEPTIDOGLYCAN transglycosylase gp16|Escherichia phage T7 (Bacteriophage T7)

Query: 1 AHGLPVMDD 9
HG+P++ D
Sbjct: 907 GHGIPILRD 915


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 3 GLPVMDD 9
G+P++DD
Sbjct: 6245 GIPIVDD 6251


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 3 GLPVMDD 9
G+P++DD
Sbjct: 6336 GIPIVDD 6342


>sp|RDRP_BTV10|RNA-DIRECTED RNA polymerase|Bluetongue virus 10 (isolate USA)

Query: 2 HGLPVMDD 9
+G+PV+D+
Sbjct: 71 YGIPVLDE 78


>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40

Query: 2 HGLPVMD 8
HGLP+++
Sbjct: 202 HGLPIVE 208


>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 1 AHGLPVMDDQ 10
+HGLPV +++
Sbjct: 780 SHGLPVSENK 789


>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 1 AHGLPVMDDQ 10
+HGLPV +++
Sbjct: 780 SHGLPVSENK 789


>sp|DPOL_BPT7|DNA-DIRECTED DNA polymerase|Escherichia phage T7 (Bacteriophage T7)

Query: 3 GLPVMDDQ 10
G PV+DD+
Sbjct: 360 GAPVVDDE 367


>sp|DPOL_BPT3|DNA-DIRECTED DNA polymerase|Enterobacteria phage T3 (Bacteriophage T3)

Query: 3 GLPVMDDQ 10
G PV+DD+
Sbjct: 360 GAPVVDDE 367




38|Sequence|186|195|VMDDQTQGSD

>sp|VP53_BPAPS|PUTATIVE protein p53|Acyrthosiphon pisum secondary endosymbiont phage

Query: 3 DDQTQGSD 10
DD+++GSD
Sbjct: 299 DDKSEGSD 306




39|Sequence|191|200|TQGSDPYIKM

>sp|RDRP_REOVJ|RNA-DIRECTED RNA polymerase lambda-3|Reovirus type 2 (strain D5/Jones)

Query: 3 GSDPYIKM 10
SDP++KM
Sbjct: 1085 NSDPFLKM 1092


>sp|RDRP_REOVD|RNA-DIRECTED RNA polymerase lambda-3|Reovirus type 3 (strain Dearing)

Query: 3 GSDPYIKM 10
SDP++KM
Sbjct: 1085 NSDPFLKM 1092


>sp|RDRP_REOVL|RNA-DIRECTED RNA polymerase lambda-3|Reovirus type 1 (strain Lang)

Query: 3 GSDPYIKM 10
SDP++KM
Sbjct: 1085 NSDPFLKM 1092


>sp|POLG_DWV|GENOME polyprotein|Deformed wing virus (DWV)

Query: 3 GSDPYIK 9
GS+PYI+
Sbjct: 1456 GSNPYIR 1462


>sp|VP2_EHDV1|OUTER capsid protein VP2|Epizootic hemorrhagic disease virus 1

Query: 1 TQGSDPYIKM 10
T+G D Y+K+
Sbjct: 701 TRGEDEYLKI 710


>sp|KFMS_FSVMD|TYROSINE-PROTEIN kinase transforming protein fms|Feline sarcoma virus (strain

Query: 1 TQGSDPYIKM 10
+QG D Y++M
Sbjct: 748 SQGVDTYVEM 757


>sp|SCAF_EHV1V|CAPSID scaffolding protein|Equine herpesvirus 1 (strain V592)

Query: 1 TQGSDPYI 8
T+GSDP++
Sbjct: 421 TKGSDPHV 428


>sp|SCAF_EHV1B|CAPSID scaffolding protein|Equine herpesvirus 1 (strain Ab4p)

Query: 1 TQGSDPYI 8
T+GSDP++
Sbjct: 421 TKGSDPHV 428


>sp|DPOL_CEV01|DNA polymerase|Chrysochromulina ericina virus (CeV01)

Query: 5 DPYIKM 10
DPYIK+
Sbjct: 1616 DPYIKL 1621




40|Sequence|196|205|PYIKMTILPD

>sp|OBP_BPT5|PUTATIVE replication origin binding protein|Escherichia phage T5

Query: 1 PYIKMTILP 9
PY+K+ I+P
Sbjct: 381 PYLKINIVP 389


>sp|DNB2_ADECC|DNA-BINDING protein|Canine adenovirus serotype 1 (strain

Query: 4 KMTILPD 10
K+T+LPD
Sbjct: 135 KLTLLPD 141


>sp|DNB2_ADECR|DNA-BINDING protein|Canine adenovirus serotype 1 (strain

Query: 4 KMTILPD 10
K+T+LPD
Sbjct: 135 KLTLLPD 141


>sp|TOP2_MIMIV|DNA topoisomerase 2|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PYIKMTILPD 10
Y K+T +PD
Sbjct: 202 SYTKITFIPD 211




41|Sequence|201|210|TILPDKRHRV

>sp|VP03_EHV2|PROBABLE membrane antigen 3|Equine herpesvirus 2 (strain 86/87)

Query: 4 PDKRHRV 10
P+K+HRV
Sbjct: 1053 PNKKHRV 1059


>sp|DPOL_EHV1V|DNA polymerase catalytic subunit|Equine herpesvirus 1 (strain V592)

Query: 2 ILPDKRHR 9
ILPD R R
Sbjct: 630 ILPDNRRR 637


>sp|DPOL_EHV1B|DNA polymerase catalytic subunit|Equine herpesvirus 1 (strain Ab4p)

Query: 2 ILPDKRHR 9
ILPD R R
Sbjct: 630 ILPDNRRR 637


>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2 ILPDKRHR 9
I PDK+H+
Sbjct: 795 ITPDKKHQ 802


>sp|TRX2_EHV1B|TRIPLEX capsid protein 2|Equine herpesvirus 1 (strain Ab4p)

Query: 2 ILPDKRHR 9
+ PD RHR
Sbjct: 183 VTPDLRHR 190


>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 LPDKRHRV 10
LP RHR+
Sbjct: 817 LPSDRHRI 824


>sp|KITH_MEHV1|THYMIDINE kinase|Meleagrid herpesvirus 1 (MeHV-1) (Turkey

Query: 1 TILPDKRHRV 10
TILPD++ V
Sbjct: 165 TILPDEKEHV 174


>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 LPDKRHRV 10
LP RHR+
Sbjct: 817 LPSDRHRI 824


>sp|KITH_MEHVF|THYMIDINE kinase|Meleagrid herpesvirus 1 (strain FC126)

Query: 1 TILPDKRHRV 10
TILPD++ V
Sbjct: 165 TILPDEKEHV 174


>sp|YL111_MIMIV|UNCHARACTERIZED protein L111|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 PDKRHR 9
PDK+HR
Sbjct: 57 PDKKHR 62




42|Sequence|206|215|KRHRVKTRVL

>sp|GLYCO_SIGMA|SPIKE glycoprotein|Sigma virus

Query: 1 KRHRVKTRVL 10
K+H++ TRVL
Sbjct: 55 KKHQILTRVL 64


>sp|GLYCO_DMSVA|GLYCOPROTEIN melanogaster sigma virus (isolate

Query: 1 KRHRVKTRVL 10
K+H++ TRVL
Sbjct: 69 KKHQILTRVL 78


>sp|DPOL_HIS1I|DNA polymerase|His1 virus (isolate Australia/Victoria) (His1V)

Query: 2 RHRVKTR 8
+H+VKTR
Sbjct: 625 KHKVKTR 631




43|Sequence|211|220|KTRVLRKTLD

>sp|PRXH_BPMD2|PUTATIVE non-heme haloperoxidase|Mycobacterium phage D29

Query: 2 TRVLRKTLD 10
TRV KTLD
Sbjct: 76 TRVTLKTLD 84




44|Sequence|216|225|RKTLDPVFDE

>sp|TRM3_EHV1V|TRIPARTITE terminase subunit 3|Equine herpesvirus 1 (strain V592)

Query: 1 RKTLDPVFDE 10
RK +PVFDE
Sbjct: 292 RKATEPVFDE 301


>sp|TRM3_EHV1B|TRIPARTITE terminase subunit 3|Equine herpesvirus 1 (strain Ab4p)

Query: 1 RKTLDPVFDE 10
RK +PVFDE
Sbjct: 292 RKATEPVFDE 301


>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)

Query: 1 RKTLDPVFDE 10
RK +PVFDE
Sbjct: 291 RKATEPVFDE 300


>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)

Query: 1 RKTLDPVFDE 10
RK +PVF+E
Sbjct: 291 RKATEPVFEE 300


>sp|SPIKE_CVPRT|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 2 KTLDPVFDE 10
+TLDP++ E
Sbjct: 922 ETLDPIYKE 930


>sp|SPIKE_CVPRM|SPIKE glycoprotein|Porcine respiratory coronavirus (strain RM4)

Query: 2 KTLDPVFDE 10
+TLDP++ E
Sbjct: 700 ETLDPIYKE 708


>sp|SPIKE_CVPR8|SPIKE glycoprotein|Porcine respiratory coronavirus (strain 86/137004

Query: 2 KTLDPVFDE 10
+TLDP++ E
Sbjct: 700 ETLDPIYKE 708


>sp|SPIKE_CVPPU|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 2 KTLDPVFDE 10
+TLDP++ E
Sbjct: 922 ETLDPIYKE 930


>sp|SPIKE_CVPMI|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 2 KTLDPVFDE 10
+TLDP++ E
Sbjct: 924 ETLDPIYKE 932


>sp|SPIKE_CVPFS|SPIKE glycoprotein|Porcine transmissible gastroenteritis coronavirus

Query: 2 KTLDPVFDE 10
+TLDP++ E
Sbjct: 924 ETLDPIYKE 932


>sp|SPIKE_CVCAK|SPIKE glycoprotein|Canine coronavirus (strain K378) (CCoV)

Query: 2 KTLDPVFDE 10
+TLDP++ E
Sbjct: 928 ETLDPIYKE 936


>sp|TRM3_GAHVM|TRIPARTITE terminase subunit 3|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 RKTLDPVFDE 10
RK ++PVF++
Sbjct: 296 RKAIEPVFED 305


>sp|AP3A_SARS|ORF3A protein|Severe acute respiratory syndrome coronavirus

Query: 4 LDPVFDE 10
+DP++DE
Sbjct: 259 MDPIYDE 265


>sp|AP3A_BCRP3|PROTEIN 3|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 4 LDPVFDE 10
+DP++DE
Sbjct: 259 MDPIYDE 265


>sp|AP3A_BCHK3|PROTEIN 3|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 4 LDPVFDE 10
+DP++DE
Sbjct: 259 MDPIYDE 265


>sp|AP3A_BC279|PROTEIN 3|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 4 LDPVFDE 10
+DP++DE
Sbjct: 259 MDPIYDE 265


>sp|POLG_CACV4|GENOME polyprotein|Canine calicivirus (strain 48) (CaCV)

Query: 2 KTLDPVF 8
KTLDP F
Sbjct: 576 KTLDPTF 582


>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain

Query: 2 KTLDPVF 8
KT+DPV+
Sbjct: 907 KTIDPVY 913


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 2 KTLDPVF 8
KT+DPV+
Sbjct: 907 KTIDPVY 913


>sp|ITP_EHV1V|INNER tegument protein|Equine herpesvirus 1 (strain V592)

Query: 3 TLDPVFDE 10
TL+PV++E
Sbjct: 460 TLEPVYNE 467


>sp|ITP_EHV1B|INNER tegument protein|Equine herpesvirus 1 (strain Ab4p)

Query: 3 TLDPVFDE 10
TL+PV++E
Sbjct: 460 TLEPVYNE 467


>sp|VF309_IIV6|UNCHARACTERIZED protein 309L|Invertebrate iridescent virus 6 (IIV-6)

Query: 3 TLDPVFDE 10
+LDPV+D+
Sbjct: 138 SLDPVYDQ 145




45|Sequence|221|230|PVFDETFTFY

>sp|VF193_IIV3|PUTATIVE apoptosis inhibitor 021L|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 VFDETFTF 9
+ DETFTF
Sbjct: 74 IMDETFTF 81


>sp|PB2_THOGV|POLYMERASE basic protein 2|Thogoto virus (isolate SiAr 126)

Query: 1 PVFDETFTFY 10
P F++TF FY
Sbjct: 419 PGFEQTFGFY 428


>sp|CAPSD_CCMV|CAPSID protein|Cowpea chlorotic mottle virus (CCMV)

Query: 1 PVFDETFT 8
P FD++FT
Sbjct: 180 PTFDDSFT 187


>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United

Query: 2 VFDETFTF 9
+F+E FTF
Sbjct: 2124 IFEEAFTF 2131


>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse

Query: 2 VFDETFTF 9
+F+E FTF
Sbjct: 2124 IFEEAFTF 2131


>sp|POLFS_SINV3|POLYPROTEIN-FSD invicta virus 3 (SINV-3)

Query: 1 PVFDETFTFY 10
P+F + F FY
Sbjct: 739 PIFVQNFKFY 748


>sp|NCAP_BUNL8|NUCLEOPROTEIN La Crosse (isolate Human/United

Query: 2 VFDETFTFY 10
+F ETF FY
Sbjct: 151 MFLETFKFY 159


>sp|NCAP_BUNLC|NUCLEOPROTEIN La Crosse

Query: 2 VFDETFTFY 10
+F ETF FY
Sbjct: 151 MFLETFKFY 159


>sp|POL_SINV3|POLYPROTEIN invicta virus 3 (SINV-3)

Query: 1 PVFDETFTFY 10
P+F + F FY
Sbjct: 739 PIFVQNFKFY 748


>sp|YL531_MIMIV|UNCHARACTERIZED protein L531|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 VFDETFTF 9
+FD+TF F
Sbjct: 170 LFDDTFIF 177


>sp|NCAP_BUNSH|NUCLEOPROTEIN snowshoe hare

Query: 2 VFDETFTFY 10
+F ETF FY
Sbjct: 151 MFLETFKFY 159




46|Sequence|226|235|TFTFYGIPYS

>sp|POG_ABPVR|PUTATIVE protein pog|Acute bee paralysis virus (strain

Query: 2 FTFYGIPYS 10
F+FY PYS
Sbjct: 62 FSFYNAPYS 70


>sp|DPOL_WHV1|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 TFTFYGIPYS 10
T TF G PYS
Sbjct: 170 TLTFKGKPYS 179


>sp|DPOL_WHV5|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 TFTFYGIPYS 10
T TF G PYS
Sbjct: 170 TLTFKGKPYS 179


>sp|DPOL_WHV3|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 TFTFYGIPYS 10
T TF G PYS
Sbjct: 170 TLTFKGKPYS 179


>sp|DPOL_WHV2|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 TFTFYGIPYS 10
T TF G PYS
Sbjct: 169 TLTFKGKPYS 178


>sp|DPOL_WHV4|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 1 TFTFYGIPYS 10
T TF G PYS
Sbjct: 170 TLTFKGKPYS 179


>sp|DPOL_GSHV|PROTEIN P|Ground squirrel hepatitis virus (strain

Query: 1 TFTFYGIPYS 10
T TF G PYS
Sbjct: 170 TLTFRGKPYS 179


>sp|DPOL_ASHV|PROTEIN P|Arctic squirrel hepatitis virus (ASHV)

Query: 1 TFTFYGIPYS 10
T TF G PYS
Sbjct: 169 TLTFKGKPYS 178


>sp|RASH_RRASV|TRANSFORMING protein p29|Rasheed rat sarcoma virus

Query: 5 YGIPY 9
YGIPY
Sbjct: 196 YGIPY 200


>sp|RASH_MSVNS|GTPASE HRas|Murine sarcoma virus NS.C58

Query: 5 YGIPY 9
YGIPY
Sbjct: 137 YGIPY 141


>sp|RASH_MSVMO|GTPASE HRas|Moloney murine sarcoma virus (MoMSV)

Query: 5 YGIPY 9
YGIPY
Sbjct: 137 YGIPY 141


>sp|RASH_MSVHA|TRANSFORMING protein p29|Harvey murine sarcoma virus

Query: 5 YGIPY 9
YGIPY
Sbjct: 189 YGIPY 193


>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66

Query: 5 YGIPYS 10
YG+PY+
Sbjct: 196 YGVPYT 201


>sp|ENV_SIVTN|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate TAN1)

Query: 1 TFTFYGIP 8
T FYG+P
Sbjct: 25 TTVFYGVP 32


>sp|RDRP_DXV96|RNA-DIRECTED RNA polymerase|Drosophila x virus (isolate Chung/1996)

Query: 2 FTFYGIPY 9
YGIPY
Sbjct: 481 LALYGIPY 488


>sp|UL13_EHV1V|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Equine herpesvirus 1 (strain V592)

Query: 3 TFYGIPY 9
T YGIP+
Sbjct: 516 TIYGIPW 522


>sp|UL13_EHV1B|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 3 TFYGIPY 9
T YGIP+
Sbjct: 516 TIYGIPW 522


>sp|CAPSD_TTVZ1|CAPSID protein|Torque teno douroucouli virus (isolate

Query: 1 TFTFYGIP 8
T TFYG P
Sbjct: 256 TVTFYGFP 263


>sp|CAPSD_PAV|CAPSID protein alpha|Pariacoto virus (PaV)

Query: 3 TFYGIPY 9
TF G+PY
Sbjct: 129 TFVGVPY 135




47|Sequence|231|240|GIPYSQLQDL

>sp|TMP_BPHA1|PROBABLE tape measure protein|Halomonas phage phiHAP-1 (isolate -/Gulf

Query: 1 GIPYSQLQ 8
G PYS LQ
Sbjct: 742 GFPYSSLQ 749


>sp|REP_BPFD|REPLICATION-ASSOCIATED protein G2P|Enterobacteria phage fd (Bacteriophage fd)

Query: 1 GIPYSQLQDL 10
GIP SQL +L
Sbjct: 368 GIPKSQLMNL 377


>sp|REP_BPM13|REPLICATION-ASSOCIATED protein G2P|Enterobacteria phage M13 (Bacteriophage M13)

Query: 1 GIPYSQLQDL 10
GIP SQL +L
Sbjct: 368 GIPKSQLMNL 377


>sp|REP_BPF1|REPLICATION-ASSOCIATED protein G2P|Enterobacteria phage f1 (Bacteriophage f1)

Query: 1 GIPYSQLQDL 10
GIP SQL +L
Sbjct: 368 GIPKSQLMNL 377


>sp|VF415_IIV6|UNCHARACTERIZED protein 415R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 GIPYSQL 7
G+PYSQL
Sbjct: 195 GMPYSQL 201


>sp|SPIKE_BCHK9|SPIKE glycoprotein|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 3 PYSQLQD 9
PYS LQD
Sbjct: 360 PYSVLQD 366


>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C

Query: 1 GIPYSQLQDL 10
G PYS QDL
Sbjct: 170 GSPYSWEQDL 179


>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2

Query: 1 GIPYSQLQDL 10
G PYS QDL
Sbjct: 170 GSPYSWEQDL 179


>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D

Query: 1 GIPYSQLQDL 10
G PYS QDL
Sbjct: 170 GSPYSWEQDL 179


>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2

Query: 1 GIPYSQLQDL 10
G PYS QDL
Sbjct: 170 GSPYSWEQDL 179


>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1

Query: 1 GIPYSQLQDL 10
G PYS QDL
Sbjct: 170 GSPYSWEQDL 179


>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1

Query: 1 GIPYSQLQDL 10
G PYS QDL
Sbjct: 170 GSPYSWEQDL 179


>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D

Query: 1 GIPYSQLQDL 10
G PYS QDL
Sbjct: 170 GSPYSWEQDL 179


>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1

Query: 1 GIPYSQLQDL 10
G PYS QDL
Sbjct: 170 GSPYSWEQDL 179


>sp|TRAP_CLVN|TRANSCRIPTIONAL activator protein|African cassava mosaic virus (isolate

Query: 4 YSQLQDL 10
+SQLQDL
Sbjct: 115 FSQLQDL 121


>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2

Query: 1 GIPYSQLQDL 10
G PYS QDL
Sbjct: 170 GSPYSWEQDL 179




48|Sequence|236|245|QLQDLVLHFL

>sp|VE7_HPV51|PROTEIN E7|Human papillomavirus 51

Query: 1 QLQDLVLHF 9
QL+D+VLH
Sbjct: 7 QLKDVVLHL 15


>sp|ENV_FIVT2|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (isolate TM2)

Query: 1 QLQDLVLHF 9
+++DL++HF
Sbjct: 509 KIEDLIVHF 517


>sp|REV_BIV29|PROTEIN Rev|Bovine immunodeficiency virus (strain R29)

Query: 1 QLQDLVLH 8
QL+DLV H
Sbjct: 111 QLEDLVRH 118


>sp|ENV_FIVWO|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (isolate Wo)

Query: 1 QLQDLVLHF 9
++ DL++HF
Sbjct: 507 KVDDLIMHF 515


>sp|ENV_FIVU8|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (strain UK8)

Query: 1 QLQDLVLHF 9
++ DL++HF
Sbjct: 509 KVDDLIMHF 517


>sp|ENV_FIVU2|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (strain UK2)

Query: 1 QLQDLVLHF 9
++ DL++HF
Sbjct: 509 KVDDLIMHF 517


>sp|ENV_FIVU1|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (strain UT-113)

Query: 1 QLQDLVLHF 9
++ DL++HF
Sbjct: 509 KVDDLIMHF 517


>sp|ENV_FIVSD|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (strain San

Query: 1 QLQDLVLHF 9
++ DL++HF
Sbjct: 509 KVDDLIMHF 517


>sp|VE7_HPV18|PROTEIN E7|Human papillomavirus type 18

Query: 2 LQDLVLHF 9
LQD+VLH
Sbjct: 8 LQDIVLHL 15




49|Sequence|241|250|VLHFLVLSFD

>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 VLHFLVLSF 9
+L+FLVL F
Sbjct: 621 LLYFLVLGF 629




50|Sequence|246|255|VLSFDRFSRD

>sp|PHOSP_TUPVT|PHOSPHOPROTEIN virus (isolate Tupaia/Thailand/-/1986) (TUPV)

Query: 3 SFDRFSRD 10
+FD FSRD
Sbjct: 63 NFDVFSRD 70


>sp|SIGM1_REOVJ|OUTER capsid protein sigma-1|Reovirus type 2 (strain D5/Jones)

Query: 1 VLSFDRFS 8
+LSF RFS
Sbjct: 359 ILSFTRFS 366


>sp|LTP_MUHVK|LARGE tegument protein deneddylase|Murid herpesvirus 1 (strain K181)

Query: 2 LSFDRF 7
LSFDRF
Sbjct: 1923 LSFDRF 1928




51|Sequence|251|260|RFSRDDVIGE

>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)

Query: 1 RFSRDDVIGE 10
R RDDVI E
Sbjct: 858 RHERDDVISE 867


>sp|L_EMARV|RNA-DIRECTED RNA polymerase L|European mountain ash ringspot-associated virus

Query: 1 RFSRDDVIGE 10
RFSR+D+ G+
Sbjct: 1185 RFSREDINGK 1194


>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)

Query: 1 RFSRDDVIGE 10
R RDDVI E
Sbjct: 857 RHERDDVISE 866


>sp|RIR1_MUHVS|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Murid herpesvirus 1 (strain

Query: 2 FSRDDVIGE 10
F DDV+GE
Sbjct: 328 FVSDDVLGE 336


>sp|R1AB_GLRV3|REPLICASE polyprotein 1ab|Grapevine leafroll-associated virus 3 (isolate

Query: 2 FSRDDVIGE 10
F+R+DVI E
Sbjct: 2686 FNREDVIQE 2694


>sp|ASIA_BPT4|10 kDa anti-sigma factor|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 RFSRDDVI 8
+FSR+D++
Sbjct: 20 KFSREDIV 27




52|Sequence|256|265|DVIGEVMVPL

>sp|POLG_BOVEV|GENOME polyprotein|Bovine enterovirus (strain VG-5-27) (BEV)

Query: 1 DVIGEVMVPL 10
DVI E VPL
Sbjct: 59 DVIKETAVPL 68


>sp|RDRP_ORSVS|REPLICASE large subunit|Odontoglossum ringspot virus (isolate Singapore

Query: 1 DVIGEVMVPL 10
DV+ +V+VP+
Sbjct: 588 DVVAKVIVPI 597


>sp|POLG_PRSVH|GENOME polyprotein|Papaya ringspot virus (strain P

Query: 3 IGEVMVPL 10
IGE+ VPL
Sbjct: 213 IGEIPVPL 220


>sp|MVP_PRSVH|P3N-PIPO polyprotein|Papaya ringspot virus (strain P

Query: 3 IGEVMVPL 10
IGE+ VPL
Sbjct: 213 IGEIPVPL 220


>sp|MVP_FMVD|MOVEMENT protein|Figwort mosaic virus (strain DxS)

Query: 1 DVIGEVMVPL 10
DV G+V +PL
Sbjct: 91 DVSGQVYLPL 100




53|Sequence|261|270|VMVPLAGVDP

>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 1 VMVPLAGVDP 10
V VPL VDP
Sbjct: 4062 VQVPLGTVDP 4071


>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain

Query: 1 VMVPLAGVDP 10
V VPL VDP
Sbjct: 4062 VQVPLGTVDP 4071


>sp|2B_CMVQ|SUPPRESSOR of silencing 2b|Cucumber mosaic virus (strain Q)

Query: 2 MVPLAGVDP 10
M+P GVDP
Sbjct: 54 MLPFHGVDP 62


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 VMVPLAGVDP 10
V VPL +DP
Sbjct: 4073 VQVPLGTLDP 4082


>sp|R1A_BC512|REPLICASE polyprotein 1a|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 VMVPLAGVDP 10
V VPL +DP
Sbjct: 4073 VQVPLGTLDP 4082


>sp|DPOL_RHCM6|DNA polymerase catalytic subunit|Rhesus cytomegalovirus (strain 68-1)

Query: 4 PLAGVD 9
PLAGVD
Sbjct: 347 PLAGVD 352


>sp|055R_FRG3G|UNCHARACTERIZED protein 055R|Frog virus 3 (isolate Goorha)

Query: 4 PLAGVDP 10
PLAGV+P
Sbjct: 41 PLAGVEP 47




54|Sequence|266|275|AGVDPSTGKV

>sp|RDRP_SCVLB|PROBABLE RNA-directed RNA polymerase|Saccharomyces cerevisiae virus L-BC

Query: 1 AGVDPSTGK 9
AG++PS+G+
Sbjct: 247 AGIEPSSGR 255


>sp|RIR1_IIV3|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Invertebrate iridescent virus 3 (IIV-3)

Query: 3 VDPSTGKV 10
+DP TGKV
Sbjct: 260 IDPHTGKV 267


>sp|GAG_SCVLB|MAJOR capsid protein|Saccharomyces cerevisiae virus L-BC (ScV-L-BC)

Query: 1 AGVDPSTGK 9
AG++PS+G+
Sbjct: 247 AGIEPSSGR 255


>sp|E1BS_ADE40|E1B protein, small T-antigen|Human adenovirus F serotype 40

Query: 1 AGVDPST 7
AG+DPST
Sbjct: 159 AGLDPST 165


>sp|GPF_BPMU|PUTATIVE capsid assembly protein F|Escherichia phage Mu (Bacteriophage Mu)

Query: 1 AGVDPSTGKV 10
AG D STG++
Sbjct: 217 AGTDESTGEI 226


>sp|Y113_OSHVF|UNCHARACTERIZED protein ORF113|Ostreid herpesvirus 1 (isolate France)

Query: 3 VDPSTGKV 10
++PSTGK+
Sbjct: 172 INPSTGKL 179


>sp|DNBI_TUHV2|MAJOR DNA-binding protein|Tupaiid herpesvirus (strain 2) (TuHV-2)

Query: 3 VDPSTGK 9
+DPSTG+
Sbjct: 593 IDPSTGE 599


>sp|LMBD2_REOVJ|OUTER capsid protein lambda-2|Reovirus type 2 (strain D5/Jones)

Query: 2 GVDPSTGK 9
+DPSTG+
Sbjct: 495 AIDPSTGR 502


>sp|RDRP_OUMVV|RNA-DEPENDENT RNA polymerase|Ourmia melon virus (isolate Melon/Iran/VE9)

Query: 1 AGVDPSTGK 9
AG+ PS GK
Sbjct: 540 AGLSPSPGK 548


>sp|LMBD2_REOVL|OUTER capsid protein lambda-2|Reovirus type 1 (strain Lang)

Query: 2 GVDPSTGK 9
+DP+TGK
Sbjct: 496 AIDPNTGK 503


>sp|LMBD2_REOVD|OUTER capsid protein lambda-2|Reovirus type 3 (strain Dearing)

Query: 2 GVDPSTGK 9
+DP+TGK
Sbjct: 496 AIDPNTGK 503


>sp|PORTL_BPMD2|PORTAL protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 2 GVDPSTGK 9
GVDP TG+
Sbjct: 271 GVDPETGQ 278


>sp|VF232_IIV6|PUTATIVE ubiquitin thioesterase 232R|Invertebrate iridescent virus 6

Query: 2 GVDPSTGK 9
G++P TGK
Sbjct: 73 GINPRTGK 80


>sp|YR419_MIMIV|UNCHARACTERIZED short-chain type dehydrogenase/reductase R419|Acanthamoeba

Query: 1 AGVDPSTG 8
AG+ P+TG
Sbjct: 107 AGIQPTTG 114


>sp|POLG_RGMVD|GENOME polyprotein|Ryegrass mosaic virus (isolate Denmark/Danish)

Query: 3 VDPSTGK 9
VDP TGK
Sbjct: 1883 VDPITGK 1889


>sp|ENV_JSRV|ENVELOPE glycoprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte

Query: 1 AGVDPSTGK 9
+G+D TGK
Sbjct: 165 SGIDEKTGK 173


>sp|POLG_CACV4|GENOME polyprotein|Canine calicivirus (strain 48) (CaCV)

Query: 3 VDPSTGK 9
+DP TGK
Sbjct: 1535 IDPETGK 1541




55|Sequence|271|280|STGKVQLTRD

>sp|443R_IIV6|UNCHARACTERIZED protein 443R|Invertebrate iridescent virus 6 (IIV-6)

Query: 3 GKVQLTRD 10
GK+QLT D
Sbjct: 518 GKIQLTGD 525


>sp|NCAP_NCDV|NUCLEOPROTEIN paramyxovirus 1 (NDV) (Avian

Query: 2 TGKVQLTRD 10
TGK Q RD
Sbjct: 345 TGKYQFARD 353


>sp|NCAP_NDVAF|NUCLEOPROTEIN disease virus (isolate AF2240)

Query: 2 TGKVQLTRD 10
TGK Q RD
Sbjct: 345 TGKYQFARD 353


>sp|POLN_KYMVJ|NON-STRUCTURAL replication polyprotein|Kennedya yellow mosaic virus (strain

Query: 2 TGKVQLTRD 10
TG+++LT D
Sbjct: 1599 TGQIKLTND 1607




56|Sequence|276|285|QLTRDIIKRN

>sp|VG27_ICHVA|UNCHARACTERIZED protein ORF27|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 QLTRDII 7
QLTRD++
Sbjct: 164 QLTRDVV 170


>sp|POLG_TEV|GENOME polyprotein|Tobacco etch virus (TEV)

Query: 1 QLTRDII 7
Q+TRDII
Sbjct: 1815 QITRDII 1821


>sp|L_TSWV1|RNA-DIRECTED RNA polymerase L|Tomato spotted wilt virus (strain

Query: 1 QLTRDIIKRN 10
+L+R+I+K N
Sbjct: 2615 ELSREILKEN 2624




57|Sequence|281|290|IIKRNIQKCI

>sp|DPOL_NPVOP|DNA polymerase|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 1 IIKRNIQKCI 10
IIK N+Q C+
Sbjct: 383 IIKYNVQDCL 392


>sp|PG067_VACCC|PROTEIN OPG067|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 IIKRNIQKCI 10
II +N+Q+CI
Sbjct: 327 IIGKNLQECI 336


>sp|PG067_VACCW|PROTEIN OPG067|Vaccinia virus (strain Western Reserve)

Query: 1 IIKRNIQKCI 10
II +N+Q+CI
Sbjct: 327 IIGKNLQECI 336


>sp|PG067_VACCD|PROTEIN OPG067|Vaccinia virus (strain Dairen I)

Query: 1 IIKRNIQKCI 10
II +N+Q+CI
Sbjct: 327 IIGKNLQECI 336


>sp|PG067_VARV|PROTEIN OPG067|Variola virus

Query: 1 IIKRNIQKCI 10
II +N+Q+CI
Sbjct: 327 IIGKNLQECI 336


>sp|PG067_VAR67|PROTEIN OPG067|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 IIKRNIQKCI 10
II +N+Q+CI
Sbjct: 327 IIGKNLQECI 336


>sp|DPOL_NPVLD|DNA polymerase|Lymantria dispar multicapsid nuclear polyhedrosis

Query: 1 IIKRNIQKCI 10
I++ N+Q C+
Sbjct: 401 IVEYNVQDCV 410


>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)

Query: 1 IIKRNIQKC 9
++K+NIQ C
Sbjct: 761 MLKKNIQHC 769


>sp|YL834_MIMIV|PUTATIVE BTB/POZ domain-containing protein L834|Acanthamoeba polyphaga

Query: 3 KRNIQKCI 10
K+NIQ CI
Sbjct: 79 KKNIQPCI 86


>sp|PG160_MONPV|DNA packaging protein OPG160|Monkeypox virus (MPXV)

Query: 3 KRNIQKCI 10
K NI+KCI
Sbjct: 116 KSNIEKCI 123


>sp|PG160_VARV|DNA packaging protein OPG160|Variola virus

Query: 3 KRNIQKCI 10
K NI+KCI
Sbjct: 86 KSNIEKCI 93


>sp|PG160_VAR67|DNA packaging protein OPG160|Variola virus (isolate

Query: 3 KRNIQKCI 10
K NI+KCI
Sbjct: 86 KSNIEKCI 93


>sp|PG160_VACCW|DNA packaging protein OPG160|Vaccinia virus (strain Western Reserve)

Query: 3 KRNIQKCI 10
K NI+KCI
Sbjct: 86 KSNIEKCI 93


>sp|PG160_VACCC|DNA packaging protein OPG160|Vaccinia virus (strain Copenhagen)

Query: 3 KRNIQKCI 10
K NI+KCI
Sbjct: 86 KSNIEKCI 93




58|Sequence|286|295|IQKCISRGEL

>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)

Query: 3 KCISRGEL 10
KCISR EL
Sbjct: 202 KCISRDEL 209


>sp|IKBL_ASFM2|IKB-LIKE protein|African swine fever virus (isolate

Query: 1 IQKCISRGEL 10
++KCI +G+L
Sbjct: 19 VKKCIKKGDL 28


>sp|POLG_GBVB|GENOME polyprotein|Hepatitis GB virus B (GBV-B)

Query: 1 IQKCISRGEL 10
+QKC+ GE+
Sbjct: 2394 LQKCVEAGEI 2403


>sp|VF098_IIV6|UNCHARACTERIZED protein 098R|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 QKCISR 7
QKCISR
Sbjct: 520 QKCISR 525


>sp|5054R_ASFM2|PROTEIN MGF 505-4R|African swine fever virus (isolate

Query: 2 QKCISRGEL 10
QKC+SR E+
Sbjct: 281 QKCLSREEI 289


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 KCISRGEL 10
KC+ RG+L
Sbjct: 5807 KCVRRGDL 5814


>sp|YR789_MIMIV|PUTATIVE ankyrin repeat protein R789|Acanthamoeba polyphaga mimivirus

Query: 2 QKCISRGEL 10
+ CISRG L
Sbjct: 43 KHCISRGAL 51


>sp|UL20_HCMVM|MEMBRANE protein UL20|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 QKCISRGE 9
+ CI+RGE
Sbjct: 87 ESCINRGE 94


>sp|UL20_HCMVA|UNCHARACTERIZED protein UL20|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 QKCISRGE 9
+ CI+RGE
Sbjct: 86 ESCINRGE 93


>sp|LEF11_NPVST|LATE expression factor 11|Spodoptera litura multicapsid

Query: 3 KCISRGEL 10
+C+SRG+L
Sbjct: 8 RCMSRGDL 15


>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United

Query: 1 IQKCISRGEL 10
I CI +GE+
Sbjct: 1044 INHCIEKGEI 1053


>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 QKCISRGEL 10
Q+C RG L
Sbjct: 227 QRCFGRGRL 235


>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 QKCISRGEL 10
Q+C RG L
Sbjct: 227 QRCFGRGRL 235


>sp|5054R_ASFB7|PROTEIN MGF 505-4R|African swine fever virus (strain

Query: 2 QKCISRGEL 10
QKC+SR ++
Sbjct: 280 QKCLSRKDI 288


>sp|5054R_ASFK5|PROTEIN MGF 505-4R|African swine fever virus (isolate

Query: 2 QKCISRGEL 10
QKC+SR ++
Sbjct: 281 QKCLSRKDI 289


>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)

Query: 1 IQKCISRG 8
+QKC+S G
Sbjct: 540 LQKCVSAG 547


>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 IQKCISRG 8
+QKC+S G
Sbjct: 540 LQKCVSAG 547




59|Sequence|291|300|SRGELQVSLS

>sp|NSP_MDV1|PUTATIVE nuclear shuttle protein|Milk vetch dwarf virus (isolate

Query: 2 RGELQVSL 9
RG+LQ+S+
Sbjct: 66 RGQLQISM 73


>sp|NSP_FBNY1|PUTATIVE nuclear shuttle protein|Faba bean necrotic yellows virus

Query: 2 RGELQVSL 9
RG+LQ+S+
Sbjct: 66 RGQLQISM 73


>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)

Query: 2 RGELQVSL 9
RG LQ+SL
Sbjct: 576 RGSLQISL 583


>sp|NSP_FBNY2|PUTATIVE nuclear shuttle protein|Faba bean necrotic yellows virus

Query: 2 RGELQVSL 9
RG+LQ+S+
Sbjct: 66 RGQLQISM 73


>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)

Query: 2 RGELQVSL 9
RG LQ+SL
Sbjct: 579 RGSLQISL 586


>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 SRGELQV 7
SRGELQV
Sbjct: 459 SRGELQV 465


>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)

Query: 3 GELQVSLS 10
GELQ+ LS
Sbjct: 876 GELQIDLS 883




60|Sequence|296|305|QVSLSYQPVA

>sp|TAT_HV1BN|PROTEIN Tat|Human immunodeficiency virus type 1

Query: 1 QVSLSYQPVA 10
QVSLS QP +
Sbjct: 9 QVSLSKQPAS 18


>sp|TAT_HV1RH|PROTEIN Tat|Human immunodeficiency virus type 1

Query: 1 QVSLSYQPVA 10
QVSLS QP +
Sbjct: 66 QVSLSKQPTS 75


>sp|TAT_HV1BR|PROTEIN Tat|Human immunodeficiency virus type 1

Query: 1 QVSLSYQPVA 10
QVSLS QP +
Sbjct: 66 QVSLSKQPTS 75


>sp|DPOL_ALHV1|DNA polymerase catalytic subunit|Alcelaphine herpesvirus 1 (strain

Query: 3 SLSYQPVA 10
+LSY PVA
Sbjct: 875 TLSYSPVA 882




61|Sequence|301|310|YQPVAQRMTV

>sp|YR156_MIMIV|UNCHARACTERIZED protein R156|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 PVAQRMTV 10
PV +RMT+
Sbjct: 208 PVGERMTI 215


>sp|BPJ_BPP2|BASEPLATE protein J|Escherichia phage P2 (Bacteriophage P2)

Query: 2 QPVAQRMTV 10
+PVA R+TV
Sbjct: 199 RPVADRVTV 207




62|Sequence|306|315|QRMTVVVLKA

***** No hits found ******


63|Sequence|311|320|VVLKARHLPK

>sp|VF436_IIV6|UNCHARACTERIZED protein 436R|Invertebrate iridescent virus 6 (IIV-6)

Query: 4 KARHLP 9
KARHLP
Sbjct: 274 KARHLP 279


>sp|CAPSD_MASV1|CAPSID polyprotein VP86|Mink astrovirus 1 (MAstV-1)

Query: 4 KARHLPK 10
K RH+PK
Sbjct: 45 KGRHMPK 51


>sp|YL283_MIMIV|PUTATIVE ankyrin repeat protein L283|Acanthamoeba polyphaga mimivirus

Query: 1 VVLKARHLPK 10
++ +A+H+PK
Sbjct: 41 ILFEAKHIPK 50


>sp|R1A_BCHK9|REPLICASE polyprotein 1a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 VVLKARHLPK 10
V+LKA HL K
Sbjct: 1946 VLLKASHLSK 1955


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 VVLKARHLPK 10
V+LKA HL K
Sbjct: 1946 VLLKASHLSK 1955


>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3

Query: 3 LKARHLPK 10
LKAR LPK
Sbjct: 353 LKARALPK 360


>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 2 VLKARHLPK 10
VLK R LPK
Sbjct: 353 VLKKRALPK 361


>sp|MU2_REOVJ|MICROTUBULE-ASSOCIATED protein mu-2|Reovirus type 2 (strain D5/Jones)

Query: 1 VVLKARHLP 9
VV+K H+P
Sbjct: 685 VVIKGNHMP 693




64|Sequence|316|325|RHLPKMDITG

>sp|SPI2_VARV|SERINE proteinase inhibitor 2|Variola virus

Query: 2 HLPKMDITG 10
H+PK +TG
Sbjct: 237 HIPKFKVTG 245


>sp|SPI2_VAR67|SERINE proteinase inhibitor 2|Variola virus (isolate

Query: 2 HLPKMDITG 10
H+PK +TG
Sbjct: 237 HIPKFKVTG 245


>sp|SPI2_VACCW|SERINE proteinase inhibitor 2|Vaccinia virus (strain Western Reserve)

Query: 2 HLPKMDITG 10
H+PK +TG
Sbjct: 237 HIPKFKVTG 245


>sp|SPI2_RABPU|SERINE proteinase inhibitor 2|Rabbitpox virus (strain Utrecht) (RPV)

Query: 2 HLPKMDITG 10
H+PK +TG
Sbjct: 237 HIPKFKVTG 245


>sp|SPI2_CWPXB|SERINE proteinase inhibitor 2|Cowpox virus (strain Brighton Red)

Query: 2 HLPKMDITG 10
H+PK +TG
Sbjct: 234 HIPKFKVTG 242


>sp|SPI2B_VACCC|PUTATIVE serine proteinase inhibitor 2|Vaccinia virus (strain Copenhagen)

Query: 2 HLPKMDITG 10
H+PK +TG
Sbjct: 114 HIPKFKVTG 122


>sp|RDRP_PMV|RNA replication protein|Papaya mosaic potexvirus (PMV)

Query: 2 HLPKMDI 8
HLPKM I
Sbjct: 1194 HLPKMPI 1200


>sp|ICP4_GAHVM|MAJOR viral transcription factor ICP4|Gallid herpesvirus 2 (strain

Query: 2 HLPKMDITG 10
H PK+D+T
Sbjct: 1392 HAPKIDVTA 1400


>sp|ICP4_GAHVG|MAJOR viral transcription factor ICP4|Gallid herpesvirus 2 (strain GA)

Query: 2 HLPKMDITG 10
H PK+D+T
Sbjct: 486 HAPKIDVTA 494




65|Sequence|321|330|MDITGLSGNP

>sp|POL_IPMA|INTRACISTERNAL A-particle Pol-related polyprotein|Mouse intracisternal a-particle

Query: 1 MDITGLSGNP 10
MD+T L+G P
Sbjct: 728 MDVTHLTGLP 737


>sp|POL_IPHA|INTRACISTERNAL A-particle Pol-related polyprotein|Hamster intracisternal

Query: 1 MDITGLSGNP 10
MD+T L+G P
Sbjct: 680 MDVTHLTGLP 689


>sp|KITH_GAHVR|THYMIDINE kinase|Gallid herpesvirus 2 (strain RB-1b)

Query: 3 ITGLSGNP 10
ITG GNP
Sbjct: 116 ITGTRGNP 123


>sp|KITH_GAHVM|THYMIDINE kinase|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 3 ITGLSGNP 10
ITG GNP
Sbjct: 116 ITGTRGNP 123


>sp|POL_IPMAI|INTRACISTERNAL A-particle Pol-related polyprotein|Mouse intracisternal a-particle

Query: 1 MDITGLSGNP 10
MD+T L+G P
Sbjct: 646 MDVTHLTGLP 655


>sp|ENLYS_BPP2|ENDOLYSIN phage P2 (Bacteriophage P2)

Query: 3 ITGLSGNP 10
+TGL G P
Sbjct: 38 VTGLDGKP 45


>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63

Query: 5 GLSGNP 10
G+SGNP
Sbjct: 116 GISGNP 121


>sp|VG32_BPMD2|GENE 32 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 MDITGLSGNP 10
+ ITGL+G P
Sbjct: 203 VGITGLAGGP 212




66|Sequence|326|335|LSGNPYVKVN

>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 1 LSGNPYVKV 9
LSG+P++KV
Sbjct: 959 LSGDPWIKV 967


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 1 LSGNPYVKV 9
LSG+P++KV
Sbjct: 960 LSGDPWIKV 968


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 1 LSGNPYVKV 9
LSG+P++KV
Sbjct: 960 LSGDPWIKV 968


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 1 LSGNPYVKV 9
LSG+P++K+
Sbjct: 961 LSGDPWIKI 969


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 1 LSGNPYVKV 9
LSG+P++K+
Sbjct: 961 LSGDPWIKI 969


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 1 LSGNPYVKV 9
LSG+P++K+
Sbjct: 961 LSGDPWIKI 969


>sp|ANCHR_BPKNT|ANCHOR protein|Klebsiella phage NTUH-K2044-K1-1 (Bacteriophage

Query: 2 SGNPYVKVN 10
SG+P+++VN
Sbjct: 78 SGSPFIEVN 86


>sp|ANCHR_BPK34|ANCHOR protein|Klebsiella phage KP34 (Bacteriophage KP34)

Query: 2 SGNPYVKVN 10
SG+P+++VN
Sbjct: 78 SGSPFIEVN 86


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 1 LSGNPYVKV 9
L+G+P++KV
Sbjct: 963 LAGDPWIKV 971


>sp|RDRP_GVAIS|RNA replication protein|Grapevine virus A (isolate Is

Query: 1 LSGNPYVK 8
L+G+PY+K
Sbjct: 1210 LAGDPYLK 1217


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 1 LSGNPYVK 8
LSG+P++K
Sbjct: 962 LSGDPWIK 969


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 1 LSGNPYVK 8
LSG+P++K
Sbjct: 961 LSGDPWIK 968


>sp|ENLYS_BPP21|SAR-ENDOLYSIN phage P21 (Bacteriophage 21)

Query: 4 NPYVKVN 10
NPY+KV+
Sbjct: 87 NPYIKVD 93


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 1 LSGNPYVK 8
LSG+P++K
Sbjct: 961 LSGDPWIK 968


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 LSGNPYVKV 9
L+G+P++K+
Sbjct: 960 LAGDPWIKI 968


>sp|P2_RGDV|MINOR outer capsid protein P2|Rice gall dwarf virus (RGDV)

Query: 1 LSGNPYVKV 9
LSG+PY+ V
Sbjct: 294 LSGSPYIDV 302


>sp|ENLYS_BPPA2|SAR-ENDOLYSIN phage PA-2 (Bacteriophage PA-2)

Query: 4 NPYVKVN 10
NPY+KV+
Sbjct: 87 NPYIKVD 93


>sp|ENLYS_BPPS1|SAR-ENDOLYSIN PS119

Query: 4 NPYVKVN 10
NPY+KV+
Sbjct: 89 NPYIKVD 95


>sp|ENLYS_BPPS3|SAR-ENDOLYSIN PS34

Query: 4 NPYVKVN 10
NPY+KV+
Sbjct: 89 NPYIKVD 95


>sp|3604L_ASFWA|PROTEIN MGF 360-4L|African swine fever virus (isolate

Query: 1 LSGNPYVK 8
L NPY+K
Sbjct: 311 LGANPYIK 318


>sp|3606L_ASFM2|PROTEIN MGF 360-6L|African swine fever virus (isolate

Query: 1 LSGNPYVK 8
L NPY+K
Sbjct: 304 LGANPYIK 311


>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)

Query: 1 LSGNPYVKV 9
L+G+PY +V
Sbjct: 354 LAGDPYTQV 362


>sp|3604L_ASFK5|PROTEIN MGF 360-4L|African swine fever virus (isolate

Query: 1 LSGNPYVK 8
L NPY+K
Sbjct: 310 LGANPYIK 317


>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58

Query: 2 SGNPYVKVN 10
+GNP K+N
Sbjct: 590 NGNPVYKIN 598


>sp|P49_ASFM2|MINOR capsid protein p49|African swine fever virus (isolate

Query: 3 GNPYVKVN 10
GNP+VK N
Sbjct: 240 GNPHVKPN 247


>sp|P49_ASFK5|MINOR capsid protein p49|African swine fever virus (isolate

Query: 3 GNPYVKVN 10
GNP+VK N
Sbjct: 240 GNPHVKPN 247


>sp|P49_ASFB7|MINOR capsid protein p49|African swine fever virus (strain

Query: 3 GNPYVKVN 10
GNP+VK N
Sbjct: 240 GNPHVKPN 247


>sp|P49_ASFP4|MINOR capsid protein p49|African swine fever virus (isolate

Query: 3 GNPYVKVN 10
GNP+VK N
Sbjct: 240 GNPHVKPN 247


>sp|P49_ASFWA|MINOR capsid protein p49|African swine fever virus (isolate

Query: 3 GNPYVKVN 10
GNP+VK N
Sbjct: 240 GNPHVKPN 247


>sp|NEC2_GAHVM|NUCLEAR egress protein 2|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 4 NPYVKV 9
NPY+K+
Sbjct: 79 NPYIKI 84


>sp|PG049_MONPV|PROTEIN OPG049|Monkeypox virus (MPXV)

Query: 1 LSGNPY 6
+SGNPY
Sbjct: 179 ISGNPY 184


>sp|DIT9_BPNF|TAIL knob protein gp9|Bacillus phage Nf (Bacteriophage Nf)

Query: 2 SGNPYVKVN 10
G P++KVN
Sbjct: 58 EGTPHIKVN 66


>sp|PG049_VACCP|PROTEIN OPG049|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 LSGNPY 6
+SGNPY
Sbjct: 180 ISGNPY 185




67|Sequence|331|340|YVKVNVYYGR

>sp|POLG_BYMV|GENOME polyprotein|Bean yellow mosaic virus

Query: 1 YVKVNVYYG 9
Y K NV YG
Sbjct: 1481 YTKQNVSYG 1489


>sp|DPOL_IIV3|DNA polymerase 120R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 YVKVNVYYG 9
+ K+NV+YG
Sbjct: 449 FEKLNVWYG 457


>sp|YL490_MIMIV|UNCHARACTERIZED protein L490|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 VKVNVYYGR 10
V+ N YYGR
Sbjct: 503 VQSNSYYGR 511


>sp|POLS_DXV96|STRUCTURAL polyprotein|Drosophila x virus (isolate Chung/1996)

Query: 2 VKVNVYYG 9
+K+N+ YG
Sbjct: 301 IKININYG 308




68|Sequence|336|345|VYYGRKRIAK

>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 2 YYGRKR 7
YYGR+R
Sbjct: 4877 YYGRRR 4882




69|Sequence|341|350|KRIAKKKTHV

>sp|POL_BIV29|GAG-POL polyprotein|Bovine immunodeficiency virus (strain R29)

Query: 3 IAKKKTHV 10
+AK+KTHV
Sbjct: 531 VAKRKTHV 538


>sp|VG430_BPPF3|PUTATIVE assembly protein ORF430|Pseudomonas phage Pf3 (Bacteriophage Pf3)

Query: 2 RIAKKKTHV 10
R+ KKK HV
Sbjct: 384 RLFKKKEHV 392




70|Sequence|346|355|KKTHVKKCTL

>sp|YR571_MIMIV|UNCHARACTERIZED protein R571|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 KTHVKKCTL 10
KTH+K CT
Sbjct: 117 KTHIKNCTF 125


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 KTHVKKCTL 10
KT VKKC L
Sbjct: 966 KTEVKKCLL 974


>sp|R1AB_LIYV9|REPLICASE polyprotein 1ab|Lettuce infectious yellows virus (isolate

Query: 1 KKTHVKKCTL 10
KKTH+ +C L
Sbjct: 42 KKTHLLRCIL 51


>sp|R1A_LIYV9|REPLICASE polyprotein 1a|Lettuce infectious yellows virus (isolate

Query: 1 KKTHVKKCTL 10
KKTH+ +C L
Sbjct: 42 KKTHLLRCIL 51


>sp|L_NDVB|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Beaudette

Query: 1 KKTHVKKCT 9
K+T +K+CT
Sbjct: 2098 KRTSLKQCT 2106


>sp|L_NDVB1|RNA-DIRECTED RNA polymerase L|Newcastle disease virus (strain Chicken/United

Query: 1 KKTHVKKCT 9
K+T +K+CT
Sbjct: 2098 KRTSLKQCT 2106


>sp|CVC1_GAHVM|CAPSID vertex component 1|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 2 KTHVKKCTL 10
KTH+ C +
Sbjct: 489 KTHISNCVI 497


>sp|Y075_SIFVH|UNCHARACTERIZED protein 75|Sulfolobus islandicus filamentous virus (isolate

Query: 2 KTHVKKCT 9
K HVK+C+
Sbjct: 112 KIHVKECS 119




71|Sequence|351|360|KKCTLNPIFN

>sp|H962L_ASFK5|PUTATIVE RNA Helicase B962L|African swine fever virus (isolate

Query: 1 KKCTLNPIFN 10
K+C P+FN
Sbjct: 940 KECGFTPMFN 949


>sp|L_PARVP|RNA-DIRECTED RNA polymerase L|Parana mammarenavirus (isolate

Query: 1 KKCTLNP 7
KKCT NP
Sbjct: 396 KKCTRNP 402


>sp|GCVK_HHV7J|PROBABLE ganciclovir kinase|Human herpesvirus 7 (strain JI)

Query: 1 KKCTLNPI 8
+ CTLNPI
Sbjct: 429 EACTLNPI 436


>sp|H962L_ASFM2|PUTATIVE RNA Helicase B962L|African swine fever virus (isolate

Query: 1 KKCTLNPIFN 10
K+C +PIF+
Sbjct: 940 KECGFSPIFS 949


>sp|H962L_ASFWA|PUTATIVE RNA Helicase B962L|African swine fever virus (isolate

Query: 1 KKCTLNPIFN 10
K+C PIF+
Sbjct: 939 KECGFTPIFS 948


>sp|H962L_ASFP4|PUTATIVE RNA Helicase B962L|African swine fever virus (isolate

Query: 1 KKCTLNPIFN 10
K+C PIF+
Sbjct: 939 KECGFTPIFS 948


>sp|H962L_ASFB7|PUTATIVE RNA helicase B962L|African swine fever virus (strain

Query: 1 KKCTLNPIFN 10
K+C PIF+
Sbjct: 939 KECGFTPIFS 948


>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA

Query: 2 KCTLNPI 8
+C LNPI
Sbjct: 626 ECALNPI 632


>sp|CAPSD_TASV2|CAPSID polyprotein VP90|Turkey astrovirus 2 (TAstV-2)

Query: 2 KCTLNPIF 9
KC LNP+
Sbjct: 103 KCFLNPLL 110


>sp|MC148_MCV1|CHEMOKINE-LIKE protein MC148|Molluscum contagiosum virus subtype 1

Query: 1 KKCTLNP 7
+KC LNP
Sbjct: 28 RKCCLNP 34


>sp|Y022_OSHVF|UNCHARACTERIZED protein ORF22|Ostreid herpesvirus 1 (isolate France)

Query: 2 KCTLNPIFN 10
K NP+FN
Sbjct: 548 KSAFNPVFN 556


>sp|ITP_ALHV1|INNER tegument protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 KKCTLNPIF 9
K CTL+P F
Sbjct: 75 KNCTLSPQF 83


>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)

Query: 1 KKCTLNPI 8
K CT++PI
Sbjct: 300 KVCTISPI 307


>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)

Query: 1 KKCTLNPI 8
K CT++PI
Sbjct: 300 KVCTISPI 307


>sp|RING4_BPCA1|RING protein 4/5|Bacteroides phage crAss001 (Bacteroides phage

Query: 2 KCTLNPIFN 10
+C LNPI +
Sbjct: 200 ECELNPIIH 208


>sp|NPH2_RFVKA|RNA helicase NPH-II|Rabbit fibroma virus (strain Kasza)

Query: 2 KCTLNPIFN 10
K TLN +FN
Sbjct: 285 KITLNTLFN 293


>sp|YL192_MIMIV|UNCHARACTERIZED protein L192|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 CTLNPIFN 10
CT+N IF+
Sbjct: 111 CTINKIFD 118




72|Sequence|356|365|NPIFNESFIY

>sp|PG107_VAR67|LATE protein H2|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 NPIFNE 6
NP+FNE
Sbjct: 53 NPVFNE 58


>sp|PG107_MONPV|MPXVGP092 virus (MPXV)

Query: 1 NPIFNE 6
NP+FNE
Sbjct: 53 NPVFNE 58


>sp|H2_VARV|LATE protein H2|Variola virus

Query: 1 NPIFNE 6
NP+FNE
Sbjct: 53 NPVFNE 58


>sp|PG107_VACCW|PROTEIN OPG107|Vaccinia virus (strain Western Reserve)

Query: 1 NPIFNE 6
NP+FNE
Sbjct: 53 NPVFNE 58


>sp|H2_VACCA|LATE protein H2|Vaccinia virus (strain Ankara) (VACV)

Query: 1 NPIFNE 6
NP+FNE
Sbjct: 53 NPVFNE 58


>sp|PG107_VACCC|PROTEIN H2|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 NPIFNE 6
NP+FNE
Sbjct: 53 NPVFNE 58


>sp|POL2_CRLVP|RNA2 polyprotein|Cherry rasp leaf virus (isolate

Query: 3 IFNESFI 9
+FNESF+
Sbjct: 816 VFNESFV 822


>sp|TERL_BPSPP|TERMINASE, large subunit|Bacillus phage SPP1 (Bacteriophage SPP1)

Query: 1 NPIFNESFI 9
N +FN SF+
Sbjct: 180 NKVFNSSFL 188


>sp|HA70D_CBDP|HEMAGGLUTININ component HA-70 type D|Clostridium botulinum D phage (Clostridium

Query: 3 IFNESFIY 10
I NE FIY
Sbjct: 172 ILNEKFIY 179




73|Sequence|361|370|ESFIYDIPTD

>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P

Query: 2 SFIYDIPT 9
S+IYD+PT
Sbjct: 62 SYIYDVPT 69


>sp|YOSQ_BPSPB|PUTATIVE HNH homing endonuclease yosQ|Bacillus phage SPbeta (Bacillus

Query: 3 FIYDIP 8
FIYDIP
Sbjct: 62 FIYDIP 67


>sp|RDRP_TOMS1|REPLICASE large subunit|Tomato mosaic virus (strain S-1)

Query: 4 IYDIPTD 10
IYDIP D
Sbjct: 205 IYDIPAD 211


>sp|RDRP_TOML|REPLICASE large subunit|Tomato mosaic virus (strain L)

Query: 4 IYDIPTD 10
IYDIP D
Sbjct: 205 IYDIPAD 211


>sp|RDRP_TOMK2|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh

Query: 4 IYDIPTD 10
IYDIP D
Sbjct: 205 IYDIPAD 211


>sp|RDRP_TOMK1|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh

Query: 4 IYDIPTD 10
IYDIP D
Sbjct: 205 IYDIPAD 211


>sp|RDRP_YOMV|REPLICASE large subunit|Youcai mosaic virus (YoMV)

Query: 4 IYDIPTD 10
IYDIP D
Sbjct: 204 IYDIPAD 210


>sp|RDRP_TMVOM|REPLICASE large subunit|Tobacco mosaic virus (strain OM)

Query: 4 IYDIPTD 10
IYDIP D
Sbjct: 205 IYDIPAD 211


>sp|RDRP_TMVKR|REPLICASE large subunit|Tobacco mosaic virus (strain Korean

Query: 4 IYDIPTD 10
IYDIP D
Sbjct: 205 IYDIPAD 211


>sp|RDRP_TMV|REPLICASE large subunit|Tobacco mosaic virus (strain vulgare)

Query: 4 IYDIPTD 10
IYDIP D
Sbjct: 205 IYDIPAD 211


>sp|RDRP_TMVB|REPLICASE large subunit|Tobacco mosaic virus (strain B935A)

Query: 4 IYDIPTD 10
IYDIP D
Sbjct: 205 IYDIPAD 211


>sp|RDRP_TBRFV|REPLICASE large subunit|Tomato brown rugose fruit virus

Query: 4 IYDIPTD 10
IYDIP D
Sbjct: 205 IYDIPAD 211


>sp|RDRP_TMVRA|REPLICASE large subunit|Tobacco mosaic virus (strain Rakkyo)

Query: 4 IYDIPTD 10
IYDIP D
Sbjct: 205 IYDIPAD 211


>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 3 FIYDIPTD 10
F YDIP D
Sbjct: 597 FPYDIPCD 604


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 3 FIYDIPTD 10
F YDIP D
Sbjct: 596 FPYDIPCD 603


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 3 FIYDIPTD 10
F YDIP D
Sbjct: 596 FPYDIPCD 603


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 3 FIYDIPTD 10
F YDIP D
Sbjct: 597 FPYDIPCD 604


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 3 FIYDIPTD 10
F YDIP D
Sbjct: 596 FPYDIPCD 603


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 3 FIYDIPTD 10
F YDIP D
Sbjct: 596 FPYDIPCD 603


>sp|RDRP_ORSVS|REPLICASE large subunit|Odontoglossum ringspot virus (isolate Singapore

Query: 4 IYDIPTD 10
IYDIP D
Sbjct: 204 IYDIPAD 210


>sp|RDRP_ORSVC|REPLICASE large subunit|Odontoglossum ringspot virus (isolate Korean

Query: 4 IYDIPTD 10
IYDIP D
Sbjct: 204 IYDIPAD 210


>sp|KBTB1_VACCW|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Western

Query: 1 ESFIYDIP 8
S+IYDIP
Sbjct: 323 NSWIYDIP 330


>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)

Query: 1 ESFIYDIP 8
S+IYDIP
Sbjct: 323 NSWIYDIP 330


>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)

Query: 1 ESFIYDIP 8
S+IYDIP
Sbjct: 323 NSWIYDIP 330


>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /

Query: 1 ESFIYDIP 8
S+IYDIP
Sbjct: 323 NSWIYDIP 330


>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)

Query: 1 ESFIYDIPTD 10
E+ IYD PT+
Sbjct: 143 ETMIYDKPTE 152


>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)

Query: 1 ESFIYDIP 8
S+IYDIP
Sbjct: 323 NSWIYDIP 330


>sp|KBTB1_ECTVM|KELCH repeat and BTB domain-containing|Ectromelia virus (strain Moscow)

Query: 1 ESFIYDIP 8
S+IYDIP
Sbjct: 323 NSWIYDIP 330


>sp|KBTB1_CAMPS|KELCH repeat and BTB domain-containing|Camelpox virus (strain CMS)

Query: 1 ESFIYDIP 8
S+IYDIP
Sbjct: 323 NSWIYDIP 330


>sp|RDRP_TMOB|REPLICASE large subunit|Tobamovirus Ob

Query: 4 IYDIPTD 10
+YDIP D
Sbjct: 205 LYDIPAD 211


>sp|RDRP_PMMVS|REPLICASE large subunit|Pepper mild mottle virus (strain

Query: 4 IYDIPTD 10
+YDIP D
Sbjct: 204 LYDIPAD 210


>sp|RDRP_PMMVJ|REPLICASE large subunit|Pepper mild mottle virus (strain

Query: 4 IYDIPTD 10
+YDIP D
Sbjct: 204 LYDIPAD 210


>sp|RDRP_WCMVM|RNA replication protein|White clover mosaic virus (strain

Query: 1 ESFIYDIP 8
ES+++D+P
Sbjct: 859 ESYVHDLP 866


>sp|RDRP_WCMVO|RNA replication protein|White clover mosaic virus (strain

Query: 1 ESFIYDIP 8
ES+++D+P
Sbjct: 859 ESYVHDLP 866


>sp|ALPHA_BSMV|REPLICATION protein alpha-A|Barley stripe mosaic virus (BSMV)

Query: 1 ESFIYDI 7
E+F+YDI
Sbjct: 112 ETFVYDI 118


>sp|PG068_VACCC|PROTEIN OPG068|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4 IYDIPTD 10
IYDIP D
Sbjct: 297 IYDIPGD 303


>sp|PG068_VACCW|PROTEIN OPG068|Vaccinia virus (strain Western Reserve)

Query: 4 IYDIPTD 10
IYDIP D
Sbjct: 297 IYDIPGD 303


>sp|PG068_VARV|PROTEIN OPG068|Variola virus

Query: 4 IYDIPTD 10
IYDIP D
Sbjct: 297 IYDIPGD 303


>sp|PG068_VAR67|PROTEIN OPG068|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 4 IYDIPTD 10
IYDIP D
Sbjct: 297 IYDIPGD 303


>sp|PG068_MONPV|PROTEIN OPG068|Monkeypox virus (MPXV)

Query: 4 IYDIPTD 10
IYDIP D
Sbjct: 297 IYDIPGD 303




74|Sequence|366|375|DIPTDLLPDI

>sp|L_TUPVT|RNA-DIRECTED RNA polymerase L|Tupaia virus (isolate Tupaia/Thailand/-/1986) (TUPV)

Query: 2 IPTDLLPD 9
IP++LLPD
Sbjct: 1883 IPSELLPD 1890


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 2 IPTDLLPD 9
+P D+LPD
Sbjct: 2121 LPEDILPD 2128


>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 2 IPTDLLPD 9
+P D+LPD
Sbjct: 2124 LPEDVLPD 2131


>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 2 IPTDLLPD 9
+P D+LPD
Sbjct: 2124 LPEDVLPD 2131


>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 3 PTDLLPD 9
P D+LPD
Sbjct: 2122 PEDILPD 2128


>sp|L_GOGV|RNA-DIRECTED RNA polymerase L|Alethinophid 1 reptarenavirus (isolate

Query: 1 DIPTDLL 7
D+PTDLL
Sbjct: 933 DLPTDLL 939


>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)

Query: 1 DIPTDLLPDI 10
D P D PDI
Sbjct: 130 DHPNDYTPDI 139


>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate

Query: 4 TDLLPD 9
TDLLPD
Sbjct: 149 TDLLPD 154


>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 2 IPTDLLPD 9
+P D++PD
Sbjct: 2119 VPEDVIPD 2126


>sp|DPOL_FOWPN|DNA polymerase|Fowlpox virus (strain NVSL) (FPV)

Query: 2 IPTDLLPD 9
I TD+LPD
Sbjct: 200 INTDILPD 207


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 IPTDLLPD 9
IPT +PD
Sbjct: 1887 IPTQFIPD 1894


>sp|Y093_OSHVF|UNCHARACTERIZED protein ORF93|Ostreid herpesvirus 1 (isolate France)

Query: 1 DIPTDLLP 8
++PT+LLP
Sbjct: 256 NVPTELLP 263


>sp|FUS_PI1HC|FUSION glycoprotein F0|Human parainfluenza 1 virus (strain

Query: 3 PTDLLPD 9
PT L+PD
Sbjct: 347 PTQLIPD 353


>sp|VR2A_BPT4|PROTEIN rIIA|Enterobacteria phage T4 (Bacteriophage T4)

Query: 5 DLLPDI 10
DLLPDI
Sbjct: 452 DLLPDI 457




75|Sequence|371|380|LLPDISIEFL

>sp|YL176_MIMIV|UNCHARACTERIZED protein L176|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 PDISIEFL 10
PDI+IEF+
Sbjct: 159 PDITIEFM 166


>sp|UNG_EBVB9|URACIL-DNA glycosylase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 LLPDISIEFL 10
LLPD+ ++FL
Sbjct: 29 LLPDLWLDFL 38


>sp|CEP2_GAHVM|CYTOPLASMIC envelopment protein 2|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 LLPDISIEFL 10
++PD++ EFL
Sbjct: 142 IIPDVTSEFL 151


>sp|GP_TSWV1|ENVELOPMENT polyprotein|Tomato spotted wilt virus (strain

Query: 3 PDISIEFL 10
PDIS+E L
Sbjct: 1002 PDISVEVL 1009


>sp|GP_TSWV|ENVELOPMENT polyprotein|Tomato spotted wilt virus (TSWV)

Query: 3 PDISIEFL 10
PDIS+E L
Sbjct: 1002 PDISVEVL 1009


>sp|R1A_GLRV3|REPLICASE protein 1a|Grapevine leafroll-associated virus 3 (isolate

Query: 1 LLPDISIEF 9
L P++SI+F
Sbjct: 471 LFPELSIQF 479


>sp|R1AB_GLRV3|REPLICASE polyprotein 1ab|Grapevine leafroll-associated virus 3 (isolate

Query: 1 LLPDISIEF 9
L P++SI+F
Sbjct: 471 LFPELSIQF 479


>sp|REP_MSVRA|REPLICATION-ASSOCIATED protein|Maize streak virus genotype D

Query: 1 LLPDISIEFL 10
L PDI EF+
Sbjct: 179 LFPDIQEEFI 188


>sp|REP_MSVSE|REPLICATION-ASSOCIATED protein|Maize streak virus genotype C

Query: 1 LLPDISIEFL 10
L PDI EF+
Sbjct: 179 LFPDIQEEFI 188


>sp|REP_MSVPA|REPLICATION-ASSOCIATED protein|Maize streak virus genotype E

Query: 1 LLPDISIEFL 10
L PDI EF+
Sbjct: 178 LFPDIQEEFI 187


>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48

Query: 3 PDISIEF 9
PDISI+F
Sbjct: 289 PDISIQF 295


>sp|REPA_MSVPA|REPLICATION-ASSOCIATED protein A|Maize streak virus genotype E

Query: 1 LLPDISIEFL 10
L PDI EF+
Sbjct: 178 LFPDIQEEFI 187


>sp|GP_TSWVR|ENVELOPMENT polyprotein|Tomato spotted wilt virus (strain

Query: 3 PDISIEFL 10
PDIS+E L
Sbjct: 1002 PDISVEVL 1009


>sp|REPA_MSVRA|REPLICATION-ASSOCIATED protein A|Maize streak virus genotype D

Query: 1 LLPDISIEFL 10
L PDI EF+
Sbjct: 179 LFPDIQEEFI 188


>sp|REPA_MSVSE|REPLICATION-ASSOCIATED protein A|Maize streak virus genotype C

Query: 1 LLPDISIEFL 10
L PDI EF+
Sbjct: 179 LFPDIQEEFI 188




76|Sequence|376|385|SIEFLVIDFD

>sp|YL769_MIMIV|PUTATIVE ankyrin repeat protein L769|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 SIEFLVIDFD 10
SIE+L+ DFD
Sbjct: 318 SIEYLINDFD 327




77|Sequence|381|390|VIDFDRTTKN

>sp|CAPSD_BPP21|MAJOR capsid protein|Enterobacteria phage P21 (Bacteriophage 21)

Query: 2 IDFDRTTKN 10
+DF R+TKN
Sbjct: 152 VDFGRSTKN 160


>sp|RPOTF_PRRSL|REPLICASE polyprotein 1TF|Porcine reproductive and respiratory syndrome

Query: 1 VIDFDRT 7
VI+FDRT
Sbjct: 893 VIEFDRT 899


>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 VIDFDRT 7
VI+FDRT
Sbjct: 893 VIEFDRT 899


>sp|VF295_IIV6|UNCHARACTERIZED protein 295L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 VIDFDRTTKN 10
VIDF R KN
Sbjct: 110 VIDFIRKNKN 119




78|Sequence|386|395|RTTKNEVVGR

>sp|SPIKE_ADE04|FIBER protein|Human adenovirus E serotype 4

Query: 2 TTKNEVVGR 10
TTKN +VG+
Sbjct: 360 TTKNNIVGQ 368


>sp|CATV_NPVMC|VIRAL cathepsin|Mamestra configurata nucleopolyhedrovirus (MacoNPV)

Query: 3 TKNEVVGR 10
TKNEVV R
Sbjct: 92 TKNEVVNR 99




79|Sequence|391|400|EVVGRLILGA

>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2 VVGRLILGA 10
+VGR+ILG
Sbjct: 1682 IVGRIILGG 1690


>sp|VAT_CAMVW|APHID transmission protein|Cauliflower mosaic virus (strain W260)

Query: 1 EVVGRLILG 9
E+VGR +LG
Sbjct: 51 EIVGRSLLG 59


>sp|VAT_CAMVS|APHID transmission protein|Cauliflower mosaic virus (strain Strasbourg)

Query: 1 EVVGRLILG 9
E+VGR +LG
Sbjct: 51 EIVGRSLLG 59


>sp|VAT_CAMVP|APHID transmission protein|Cauliflower mosaic virus (strain PV147)

Query: 1 EVVGRLILG 9
E+VGR +LG
Sbjct: 51 EIVGRSLLG 59


>sp|VAT_CAMVN|APHID transmission protein|Cauliflower mosaic virus (strain NY8153)

Query: 1 EVVGRLILG 9
E+VGR +LG
Sbjct: 51 EIVGRSLLG 59


>sp|VAT_CAMVE|APHID transmission protein|Cauliflower mosaic virus (strain BBC)

Query: 1 EVVGRLILG 9
E+VGR +LG
Sbjct: 51 EIVGRSLLG 59


>sp|VAT_CAMVC|APHID transmission protein|Cauliflower mosaic virus (strain CM-1841)

Query: 1 EVVGRLILG 9
E+VGR +LG
Sbjct: 51 EIVGRSLLG 59


>sp|POLG_SVV1|GENOME polyprotein|Seneca Valley virus (isolate -/United

Query: 2 VVGRLILG 9
+VGR++LG
Sbjct: 1906 IVGRMLLG 1913


>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 VVGRLILG 9
V+GRL+LG
Sbjct: 86 VLGRLLLG 93


>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 VVGRLILG 9
V+GRL+LG
Sbjct: 86 VLGRLLLG 93


>sp|CEP1_SHV21|CYTOPLASMIC envelopment protein 1|Saimiriine herpesvirus 2 (strain 11)

Query: 1 EVVGRLILG 9
EVV R++LG
Sbjct: 2 EVVARVLLG 10


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 1 EVVGRLILG 9
E+VGRL+ G
Sbjct: 1876 EIVGRLLDG 1884




80|Sequence|396|405|LILGAHSVTA

>sp|POLG_BYMV|GENOME polyprotein|Bean yellow mosaic virus

Query: 1 LILGAHSVTA 10
I+G HS+TA
Sbjct: 2183 FIVGIHSLTA 2192


>sp|POLG_TVMV|GENOME polyprotein|Tobacco vein mottling virus (TVMV)

Query: 2 ILGAHSVT 9
ILG HS+T
Sbjct: 2164 ILGIHSLT 2171


>sp|RDRP_BOOLV|RNA-DIRECTED RNA polymerase|Boolarra virus (BoV)

Query: 1 LILGAHSVT 9
+ILG H +T
Sbjct: 5 IILGEHQIT 13




81|Sequence|401|410|HSVTASGAEH

>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain

Query: 1 HSVTASGAEH 10
H++T SGAE
Sbjct: 457 HTITISGAEQ 466


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 1 HSVTASGAE 9
HSVT +GA+
Sbjct: 403 HSVTETGAQ 411


>sp|PG159_MONPV|PROTEIN OPG159|Monkeypox virus (MPXV)

Query: 1 HSVTASGA 8
H VT+SGA
Sbjct: 84 HGVTSSGA 91


>sp|PG159_VACCW|PROTEIN OPG159|Vaccinia virus (strain Western Reserve)

Query: 1 HSVTASGA 8
H VT+SGA
Sbjct: 84 HGVTSSGA 91


>sp|RDRP_PLRVW|PROTEIN P1-P2|Potato leafroll virus (strain

Query: 1 HSVTASGAEH 10
HS T GA H
Sbjct: 331 HSATIDGAHH 340


>sp|P1_PLRVW|PROTEIN P1|Potato leafroll virus (strain

Query: 1 HSVTASGAEH 10
HS T GA H
Sbjct: 331 HSATIDGAHH 340




82|Sequence|406|415|SGAEHWREVC

>sp|GAG_MLVDE|GAG polyprotein|Murine leukemia virus (strain DEF27)

Query: 4 EHWREV 9
EHWR+V
Sbjct: 14 EHWRDV 19


>sp|RDRP_LDCPR|RNA-DIRECTED RNA polymerase VP2|Lymantria dispar cypovirus 1 (isolate

Query: 3 AEHWREVC 10
A+ WRE+C
Sbjct: 143 ADLWRELC 150


>sp|SPIKE_CVCBG|SPIKE glycoprotein|Canine coronavirus (strain BGF10) (CCoV)

Query: 3 AEHWREVC 10
A WR++C
Sbjct: 152 ANQWRDIC 159


>sp|POL1_TRSV|RNA1 polyprotein|Tobacco ringspot virus (TobRV) (TRSV)

Query: 3 AEHWR 7
AEHWR
Sbjct: 2025 AEHWR 2029


>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 GAEHWREV 9
GAEH R+V
Sbjct: 283 GAEHMRDV 290


>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 GAEHWREV 9
GAEH R+V
Sbjct: 283 GAEHMRDV 290


>sp|VIE2_NPVR1|E3 ubiquitin-protein ligase IE2|Rachiplusia ou multiple

Query: 4 EHWREV 9
+HWRE+
Sbjct: 284 QHWREL 289


>sp|VIE2_NPVBM|E3 ubiquitin-protein ligase IE2|Bombyx mori nuclear polyhedrosis virus

Query: 4 EHWREV 9
+HWRE+
Sbjct: 298 QHWREL 303


>sp|IE2_NPVAC|E3 ubiquitin-protein ligase IE2|Autographa californica nuclear

Query: 4 EHWREV 9
+HWRE+
Sbjct: 285 QHWREL 290


>sp|VP47_NPVOP|VIRAL transcription regulator p47|Orgyia pseudotsugata multicapsid

Query: 2 GAEHWREV 9
A HWR V
Sbjct: 218 AAAHWRSV 225


>sp|VP6B_BTV10|PROTEIN VP6-B|Bluetongue virus 10 (isolate USA)

Query: 1 SGAEHWREVC 10
+G HW+EV
Sbjct: 286 TGDPHWKEVA 295


>sp|TIPJ_BPSE4|TIP attachment protein J|Escherichia phage SECphi4

Query: 3 AEHWREVC 10
A HW ++C
Sbjct: 286 AWHWYDIC 293


>sp|VP6A_BTV10|HELICASE VP6-A|Bluetongue virus 10 (isolate USA)

Query: 1 SGAEHWREVC 10
+G HW+EV
Sbjct: 290 TGDPHWKEVA 299


>sp|VP6_BTV1S|HELICASE VP6-A|Bluetongue virus 1 (isolate South

Query: 1 SGAEHWREVC 10
+G HW+EV
Sbjct: 290 TGDPHWKEVA 299


>sp|VP6_BTV13|HELICASE VP6-A|Bluetongue virus 13 (isolate USA)

Query: 1 SGAEHWREVC 10
+G HW+EV
Sbjct: 286 TGDPHWKEVA 295


>sp|PRO_ADEE2|PROTEASE adenovirus B serotype 2

Query: 1 SGAEHW 6
+G EHW
Sbjct: 49 TGGEHW 54


>sp|VP6_BTV2A|HELICASE VP6-A|Bluetongue virus 2 (isolate USA)

Query: 1 SGAEHWREVC 10
+G HW+EV
Sbjct: 262 TGDPHWKEVA 271


>sp|GAG_MLVHO|GAG polyprotein|Hortulanus murine leukemia virus (HoMuLV)

Query: 4 EHWREV 9
+HWR+V
Sbjct: 14 DHWRDV 19


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 4 EHWREV 9
+HW+EV
Sbjct: 448 KHWKEV 453


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 4 EHWREV 9
+HW+EV
Sbjct: 448 KHWKEV 453


>sp|VP6_BTVBZ|HELICASE VP6-A|Bluetongue virus 13 (isolate 13B89Z)

Query: 1 SGAEHWREV 9
+G HW+EV
Sbjct: 290 TGDPHWKEV 298


>sp|VP6_BTV17|HELICASE VP6-A|Bluetongue virus 17 (isolate USA)

Query: 1 SGAEHWREV 9
+G HW+EV
Sbjct: 286 TGDPHWKEV 294


>sp|VP6_BTV11|HELICASE VP6-A|Bluetongue virus 11 (isolate USA)

Query: 1 SGAEHWREV 9
+G HW+EV
Sbjct: 286 TGDPHWKEV 294


>sp|PRO_ADE03|PROTEASE adenovirus B serotype 3

Query: 1 SGAEHW 6
+G EHW
Sbjct: 56 TGGEHW 61




83|Sequence|411|420|WREVCESPRK

>sp|POL2_SDVS5|RNA2 polyprotein|Satsuma dwarf virus (isolate Satsuma

Query: 2 REVCESPRK 10
RE C +PRK
Sbjct: 382 REACAAPRK 390


>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 WREVCESPRK 10
WR +C PR+
Sbjct: 837 WRAICNIPRR 846


>sp|G1P_BPPF3|PUTATIVE Gene 1 protein|Pseudomonas phage Pf3 (Bacteriophage Pf3)

Query: 1 WREVCESP 8
W VC+SP
Sbjct: 141 WSHVCDSP 148


>sp|VP2_RRSVT|OUTER capsid protein VP2|Rice ragged stunt virus (isolate

Query: 1 WREVCESPR 9
W++VC P+
Sbjct: 133 WQQVCADPK 141


>sp|VG37_ICHVA|UNCHARACTERIZED protein ORF37|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 REVCESPRK 10
R+ CE PR+
Sbjct: 640 RDACEPPRE 648


>sp|CAPSD_PASV1|CAPSID polyprotein VP90|Porcine astrovirus 1 (PAstV-1)

Query: 1 WREVCESPRK 10
W E C++ RK
Sbjct: 752 WSEACKAARK 761


>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 WREVCESPRK 10
WR C PR+
Sbjct: 832 WRAFCNIPRR 841


>sp|MVP_TAVCV|MOVEMENT protein|Taro vein chlorosis virus (TAVCV)

Query: 1 WREVCESPRK 10
W++V SP K
Sbjct: 278 WKKVLASPEK 287


>sp|MVP_INSV|MOVEMENT protein|Impatiens necrotic spot virus (INSV)

Query: 2 REVCESPR 9
+E C+SPR
Sbjct: 222 KEFCDSPR 229


>sp|CHMA_BPPA3|CHIMALLIN phage PhiPA3 (Pseudomonas aeruginosa

Query: 1 WREVCESPRK 10
W +C+S R+
Sbjct: 139 WNRICDSIRQ 148


>sp|CARG2_BPCA1|CARGO protein 2|Bacteroides phage crAss001 (Bacteroides phage

Query: 2 REVCESPRK 10
+EV E+PRK
Sbjct: 172 KEVRENPRK 180


>sp|YL698_MIMIV|UNCHARACTERIZED protein L698|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 REVCESPRK 10
R+V E+PRK
Sbjct: 26 RDVVENPRK 34


>sp|GP_SBVBH|ENVELOPMENT polyprotein|Bovine Schmallenberg virus (isolate

Query: 4 VCESPRK 10
VC+SP+K
Sbjct: 721 VCKSPQK 727




84|Sequence|416|425|ESPRKPVAKW

>sp|POLG_SMSV1|GENOME polyprotein|San Miguel sea lion virus

Query: 1 ESPRKPVAKW 10
E+P KPV KW
Sbjct: 716 ENPGKPVPKW 725


>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P

Query: 2 SPRKPVAKW 10
+PR PV +W
Sbjct: 489 NPRLPVYRW 497


>sp|YL690_MIMIV|UNCHARACTERIZED protein L690|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 PRKPVAKW 10
PR+ VA W
Sbjct: 41 PRRAVATW 48


>sp|LAP_SWPVK|E3 ubiquitin-protein ligase LAP|Swinepox virus (strain Kasza) (SWPV)

Query: 2 SPRKPVAKW 10
S RKP ++W
Sbjct: 56 SVRKPFSQW 64


>sp|NCAP_INCCA|NUCLEOPROTEIN C virus (strain C/California/1978)

Query: 3 PRKPVAK 9
P+KP+AK
Sbjct: 517 PKKPIAK 523


>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)

Query: 3 PRKPVAK 9
P+KP+AK
Sbjct: 517 PKKPIAK 523


>sp|NCAP_INCAA|NUCLEOPROTEIN C virus (strain C/Ann

Query: 3 PRKPVAK 9
P+KP+AK
Sbjct: 517 PKKPIAK 523


>sp|MTC1_PBCVC|TYPE II methyltransferase M.CviBI|Paramecium bursaria Chlorella virus

Query: 5 KPVAKW 10
KP+ KW
Sbjct: 2 KPIVKW 7


>sp|CXCL1_HCMVM|CHEMOKINE vCXCL1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 SPRKPVAKW 10
SP P +KW
Sbjct: 78 SPHHPFSKW 86


>sp|UL88_ELHVK|PROTEIN U59|Elephantid herpesvirus 1 (isolate Asian

Query: 1 ESPRKPVAKW 10
++PRK A+W
Sbjct: 5 DTPRKVGARW 14


>sp|REP_BEYDV|REPLICATION-ASSOCIATED protein|Bean yellow dwarf virus (BeYDV)

Query: 2 SPRKPVAKW 10
SPRK A+W
Sbjct: 117 SPRKSDARW 125


>sp|POL_SIVM1|GAG-POL polyprotein|Simian immunodeficiency virus (isolate Mm142-83)

Query: 2 SPRKPVAKW 10
PRKP+ W
Sbjct: 386 GPRKPIKCW 394


>sp|POL_SIVM2|GAG-POL polyprotein|Simian immunodeficiency virus (isolate Mm251)

Query: 2 SPRKPVAKW 10
PRKP+ W
Sbjct: 386 GPRKPIKCW 394


>sp|GAG_SIVM2|GAG polyprotein|Simian immunodeficiency virus (isolate Mm251)

Query: 2 SPRKPVAKW 10
PRKP+ W
Sbjct: 386 GPRKPIKCW 394


>sp|REPA_BEYDV|REPLICATION-ASSOCIATED protein A|Bean yellow dwarf virus (BeYDV)

Query: 2 SPRKPVAKW 10
SPRK A+W
Sbjct: 117 SPRKSDARW 125




85|Sequence|421|431|PVAKWHSLSEY

>sp|PRO_BPHK7|PROHEAD protease|Enterobacteria phage HK97 (Bacteriophage HK97)

Query: 1 PVAKWHSLSE 10
PV KW SL+E
Sbjct: 71 PVGKWDSLAE 80


>sp|POLG_PSBMV|GENOME polyprotein|Pea seed-borne mosaic virus (strain

Query: 2 VAKWHSLSEY 11
V++WH+ EY
Sbjct: 1733 VSRWHTAHEY 1742


>sp|NSP1_ROTRH|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Monkey/United

Query: 5 WHSLSEY 11
WHS++EY
Sbjct: 379 WHSITEY 385


>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)

Query: 1 PVAKWHSLSEY 11
P WH+ EY
Sbjct: 968 PEPTWHAFEEY 978


>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 1 PVAKWHSLSEY 11
P WH+ EY
Sbjct: 967 PEPTWHAFEEY 977


>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)

Query: 1 PVAKWHSLSEY 11
P WH+ EY
Sbjct: 969 PEPTWHAFEEY 979


>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)

Query: 1 PVAKWHSLSEY 11
P WH+ EY
Sbjct: 988 PEPTWHAFEEY 998


>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)

Query: 3 AKWHSLSE 10
A WHSL E
Sbjct: 414 ALWHSLPE 421


>sp|VIF_HV2UC|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 2 VAKWHSLSEY 11
+ KWHSL +Y
Sbjct: 19 LEKWHSLVKY 28


>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 2 VAKWHSLSEY 11
+ KWHSL +Y
Sbjct: 19 MEKWHSLVKY 28


>sp|VIF_HV2RO|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 2 VAKWHSLSEY 11
+ KWHSL +Y
Sbjct: 19 MEKWHSLVKY 28


>sp|VIF_HV2KR|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 2 VAKWHSLSEY 11
+ KWHSL +Y
Sbjct: 19 MEKWHSLVKY 28


>sp|VIF_HV2SB|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 2 VAKWHSLSEY 11
+ KWHSL +Y
Sbjct: 19 MEKWHSLIKY 28


>sp|NS1_MPRVN|PUTATIVE non-structural protein 1|Micromonas pusilla reovirus (isolate

Query: 3 AKWHSLSEY 11
++HS+SEY
Sbjct: 445 GRYHSISEY 453


>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)

Query: 3 AKWHSLSE 10
A WHSL E
Sbjct: 406 ALWHSLPE 413


>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24

Query: 1 PVAKWHSLSEY 11
PVAK S EY
Sbjct: 18 PVAKVQSTDEY 28


>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 AKWHSLSE 10
A WHSL E
Sbjct: 414 ALWHSLPE 421


>sp|VIF_HV2NZ|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 2 VAKWHSLSEY 11
+ +WHSL +Y
Sbjct: 19 MERWHSLVKY 28


>sp|VIF_HV2G1|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 2 VAKWHSLSEY 11
+ +WHSL +Y
Sbjct: 19 MERWHSLVKY 28


>sp|VIF_SIVM2|VIRION infectivity factor|Simian immunodeficiency virus (isolate Mm251)

Query: 2 VAKWHSLSEY 11
+ +WHSL +Y
Sbjct: 19 LERWHSLIKY 28


>sp|VIF_HV2D2|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 2 VAKWHSLSEY 11
+ +WHSL +Y
Sbjct: 19 LERWHSLIKY 28


>sp|VIF_HV2EH|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 2 VAKWHSLSEY 11
+ +WHSL +Y
Sbjct: 19 LERWHSLIKY 28


>sp|VIF_HV2ST|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 2 VAKWHSLSEY 11
+ +WHSL +Y
Sbjct: 19 MERWHSLIKY 28


>sp|VIF_SIVM1|VIRION infectivity factor|Simian immunodeficiency virus (isolate

Query: 2 VAKWHSLSEY 11
+ +WHSL +Y
Sbjct: 19 LERWHSLIKY 28






THE END