SYT11_HUMAN Blast Output
Archaea
1|Sequence|1|10|MAEITNIRPS

>sp|AATD_THEON|A-TYPE ATP synthase subunit D|Thermococcus onnurineus (strain NA1)

Query: 1 MAEITNIRPS 10
MAE+ N++P+
Sbjct: 1 MAELLNVKPT 10


>sp|AATD_THEGJ|A-TYPE ATP synthase subunit D|Thermococcus gammatolerans (strain DSM

Query: 1 MAEITNIRPS 10
MAE+ N++P+
Sbjct: 1 MAELLNVKPT 10


>sp|SYE_PYRNV|GLUTAMATE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 MAEITNIRP 9
MAE+ ++RP
Sbjct: 32 MAEVPDLRP 40


>sp|AATD_DESSY|A-TYPE ATP synthase subunit D|Desulfurococcus sp. (strain SY)

Query: 1 MAEITNIRPS 10
MAE+ N++P+
Sbjct: 1 MAELLNVKPT 10


>sp|AATD_THEKO|A-TYPE ATP synthase subunit D|Thermococcus kodakarensis (strain ATCC

Query: 1 MAEITNIRPS 10
MAE+ N++P+
Sbjct: 1 MAELLNVKPT 10


>sp|SYE_PYRCJ|GLUTAMATE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 MAEITNIRP 9
MAE+ +RP
Sbjct: 32 MAEVPELRP 40


>sp|SYE_PYRIL|GLUTAMATE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 MAEITNIRP 9
MAE+ +RP
Sbjct: 32 MAEVPELRP 40




2|Sequence|6|15|NIRPSFDVSP

>sp|R15PI_PYRFU|RIBOSE 1,5-bisphosphate isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IRPSFDVSP 10
+ P+FDV+P
Sbjct: 277 LNPAFDVTP 285


>sp|MTNA_AERPE|PUTATIVE methylthioribose-1-phosphate isomerase|Aeropyrum pernix (strain

Query: 4 PSFDVSP 10
PSFDV+P
Sbjct: 336 PSFDVTP 342


>sp|R15PI_THEKO|RIBOSE 1,5-bisphosphate isomerase|Thermococcus kodakarensis (strain ATCC

Query: 4 PSFDVSP 10
P+FDV+P
Sbjct: 277 PAFDVTP 283


>sp|R15PI_PYRHO|RIBOSE 1,5-bisphosphate isomerase|Pyrococcus horikoshii (strain ATCC

Query: 4 PSFDVSP 10
P+FDV+P
Sbjct: 279 PAFDVTP 285


>sp|R15PI_ARCFU|RIBOSE 1,5-bisphosphate isomerase|Archaeoglobus fulgidus (strain ATCC

Query: 4 PSFDVSP 10
P+FDV+P
Sbjct: 262 PAFDVTP 268


>sp|R15PI_PYRAB|RIBOSE 1,5-bisphosphate isomerase|Pyrococcus abyssi (strain GE5 /

Query: 4 PSFDVSP 10
P+FDV+P
Sbjct: 279 PAFDVTP 285


>sp|R15PI_METJA|RIBOSE 1,5-bisphosphate isomerase|Methanocaldococcus jannaschii (strain

Query: 4 PSFDVSP 10
P+FDV+P
Sbjct: 270 PAFDVTP 276


>sp|MTNA_PYRFU|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus furiosus (strain

Query: 4 PSFDVSP 10
P+FDV+P
Sbjct: 321 PAFDVTP 327


>sp|MTNA_METTH|PUTATIVE methylthioribose-1-phosphate isomerase|Methanothermobacter

Query: 2 IRPSFDVSP 10
I P+FD+ P
Sbjct: 286 INPAFDIVP 294


>sp|MTNA_PYRHO|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus horikoshii

Query: 4 PSFDVSP 10
P+FDV+P
Sbjct: 321 PAFDVTP 327


>sp|CHEB_NATPD|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Natronomonas pharaonis

Query: 1 NIRPSFDVS 9
N+RP+ DV+
Sbjct: 266 NVRPAVDVT 274


>sp|MTNA_PYRAB|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus abyssi (strain

Query: 4 PSFDVSP 10
P+FDV+P
Sbjct: 321 PAFDVTP 327


>sp|R15PI_HALTV|RIBOSE 1,5-bisphosphate isomerase|Haloterrigena turkmenica (strain ATCC

Query: 4 PSFDVSP 10
P+FDV+P
Sbjct: 284 PAFDVTP 290


>sp|R15PI_HALVD|RIBOSE 1,5-bisphosphate isomerase|Haloferax volcanii (strain ATCC 29605

Query: 4 PSFDVSP 10
P+FDV+P
Sbjct: 273 PAFDVTP 279


>sp|G1PDH_METPE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosphaerula palustris (strain ATCC

Query: 2 IRPSFDVS 9
+ PSFD+S
Sbjct: 69 LAPSFDIS 76


>sp|MTSA_METMA|METHYLATED-THIOL--COENZYME M methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 RPSFDVS 9
RP FD+S
Sbjct: 71 RPQFDIS 77


>sp|MTSA_METBA|METHYLATED-THIOL--COENZYME M methyltransferase|Methanosarcina barkeri

Query: 3 RPSFDVS 9
RP FD+S
Sbjct: 71 RPQFDIS 77


>sp|FLPA_THEAC|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermoplasma acidophilum (strain

Query: 1 NIRPSFDVSP 10
NIR D+SP
Sbjct: 204 NIREVIDLSP 213


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 3 RPSFDVSP 10
RP+ DV P
Sbjct: 10 RPTLDVDP 17




3|Sequence|11|20|FDVSPVVAGL

>sp|Y1429_THEAC|UPF0159 protein Ta1429|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FDVSPVVAGL 10
FDV P++A +
Sbjct: 375 FDVPPIIAKM 384


>sp|KTHY_METBU|PROBABLE thymidylate kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 FDVSPVVA 8
FD+ P VA
Sbjct: 131 FDIDPAVA 138


>sp|ACDB_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit beta|Archaeoglobus

Query: 1 FDVSPVVAG 9
FD+SP+ G
Sbjct: 27 FDISPMYEG 35


>sp|PURL_THESM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus sibiricus (strain DSM 12597

Query: 4 SPVVAGL 10
+PVVAGL
Sbjct: 524 TPVVAGL 530


>sp|COBQ_METMJ|PROBABLE cobyric acid synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 DVSPVVAGL 10
D+ P+VAG+
Sbjct: 183 DIRPLVAGI 191


>sp|PURL_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus kodakarensis (strain ATCC

Query: 4 SPVVAGL 10
+PVVAGL
Sbjct: 524 TPVVAGL 530


>sp|AATC_METTH|A-TYPE ATP synthase subunit C|Methanothermobacter thermautotrophicus

Query: 2 DVSPVVAGL 10
DVS VV+GL
Sbjct: 290 DVSGVVSGL 298


>sp|Y243_ARCFU|UNCHARACTERIZED protein AF_0243|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FDVSPVVAGL 10
FD++ ++AG+
Sbjct: 61 FDLAVIIAGI 70


>sp|HLY_NATA1|HALOLYSIN asiatica (strain ATCC 700177

Query: 4 SPVVAGL 10
SPVVAG+
Sbjct: 354 SPVVAGV 360


>sp|PURL_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus gammatolerans (strain DSM 15229

Query: 4 SPVVAGL 10
+PVVAGL
Sbjct: 523 TPVVAGL 529


>sp|Y1590_METJA|UNCHARACTERIZED protein MJ1590|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VSPVVAGL 10
+SP++AGL
Sbjct: 3 ISPLIAGL 10




4|Sequence|16|25|VVAGLIGASV

>sp|SYM_METMP|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VVAGLIGA 8
+V+GLIGA
Sbjct: 600 IVSGLIGA 607


>sp|NNR_METJA|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanocaldococcus jannaschii

Query: 1 VVAGLIGA 8
V+AGLIGA
Sbjct: 434 VLAGLIGA 441


>sp|ARGC_METKA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanopyrus kandleri (strain AV19 /

Query: 1 VVAGLIGAS 9
VV G++GAS
Sbjct: 2 VVVGIVGAS 10


>sp|SYE_CENSY|GLUTAMATE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 VVAGLIGA 8
V+AGL+GA
Sbjct: 28 VLAGLLGA 35


>sp|ARGC_METBF|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VVAGLIGAS 9
+ AG+IGAS
Sbjct: 2 IKAGIIGAS 10


>sp|Y700_METJA|UNCHARACTERIZED MscS family protein MJ0700|Methanocaldococcus jannaschii (strain

Query: 1 VVAGLIGASV 10
V GLIGA+V
Sbjct: 109 VSVGLIGAAV 118


>sp|TMG10_METJA|TRNA (guanine(10)-N2)-dimethyltransferase|Methanocaldococcus jannaschii

Query: 1 VVAGLIGASV 10
+ AGLIGA +
Sbjct: 221 IEAGLIGAKL 230


>sp|DGGGP_THEON|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus onnurineus (strain NA1)

Query: 1 VVAGLIGAS 9
VVAGL GA+
Sbjct: 134 VVAGLTGAT 142




5|Sequence|21|30|IGASVLVVCV

>sp|THIOL_METTL|ACETYL-COA acetyltransferase|Methanothermococcus thermolithotrophicus

Query: 2 GASVLVVC 9
GAS L+VC
Sbjct: 212 GASALIVC 219


>sp|CBIMQ_METLZ|PUTATIVE fused cobalt transport protein|Methanocorpusculum labreanum (strain

Query: 1 IGASVLVVCV 10
IGA+VLV C+
Sbjct: 311 IGAAVLVFCL 320


>sp|RS2_CENSY|SMALL ribosomal subunit protein uS2|Cenarchaeum symbiosum (strain A)

Query: 2 GASVLVVC 9
GAS L+VC
Sbjct: 67 GASELIVC 74


>sp|RS2_METAR|SMALL ribosomal subunit protein uS2|Methanocella arvoryzae (strain DSM

Query: 3 ASVLVVC 9
A+VLVVC
Sbjct: 77 ANVLVVC 83




6|Sequence|26|35|LVVCVSVTVF

***** No hits found ******


7|Sequence|31|40|SVTVFVWSCC

>sp|ENO_METTP|ENOLASE thermoacetophila (strain DSM 6194

Query: 1 SVTVFVWSCC 10
+V V VW+CC
Sbjct: 21 TVEVDVWTCC 30


>sp|CCA_NANEQ|CCA-ADDING enzyme|Nanoarchaeum equitans (strain Kin4-M)

Query: 5 FVWSCC 10
++W CC
Sbjct: 320 YLWVCC 325


>sp|TATCT_HALVD|SEC-INDEPENDENT protein translocase protein TatCt|Haloferax volcanii (strain ATCC

Query: 3 TVFVWS 8
TVFVW+
Sbjct: 572 TVFVWT 577




8|Sequence|36|45|VWSCCHQQAE

>sp|THIL_METTH|THIAMINE-MONOPHOSPHATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 SCCHQQA 9
+CCH QA
Sbjct: 115 ACCHYQA 121


>sp|ENO_METTP|ENOLASE thermoacetophila (strain DSM 6194

Query: 1 VWSCC 5
VW+CC
Sbjct: 26 VWTCC 30


>sp|Y308_METJA|UNCHARACTERIZED protein MJ0308|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VWSCCH 6
VW+C H
Sbjct: 228 VWTCGH 233


>sp|QUEC_METBU|7-CYANO-7-DEAZAGUANINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 WSCCHQQAE 10
WSC H E
Sbjct: 192 WSCYHGAEE 200


>sp|QUEC_METAC|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 WSCCHQQ 8
WSC H +
Sbjct: 193 WSCYHGE 199


>sp|QUEC_METMA|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 WSCCH 6
WSC H
Sbjct: 193 WSCYH 197




9|Sequence|41|50|HQQAEKKQKN

>sp|Y963_METKA|MEMO1 family protein MK0963|Methanopyrus kandleri (strain AV19 /

Query: 1 HQQAEKKQK 9
H QA+KK +
Sbjct: 200 HDQAQKKDR 208


>sp|ARCSA_METAC|ARCHAEOSINE synthase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 2 QQAEKKQKN 10
Q AEK++KN
Sbjct: 480 QNAEKEKKN 488




10|Sequence|46|55|KKQKNPPYKF

>sp|RL30_THEVO|LARGE ribosomal subunit protein uL30|Thermoplasma volcanium (strain ATCC

Query: 5 NPPYK 9
NPPYK
Sbjct: 119 NPPYK 123


>sp|Y1460_METJA|UNCHARACTERIZED protein MJ1460|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KNPPYKF 10
KNPPYK
Sbjct: 93 KNPPYKI 99


>sp|SYP_NATPD|PROLINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 KKQKNPPYKF 10
+ ++NP +KF
Sbjct: 329 RDERNPGFKF 338


>sp|GCH3_METMP|GTP cyclohydrolase III|Methanococcus maripaludis (strain DSM 14266

Query: 2 KQKNPPYKF 10
+QKN PY +
Sbjct: 254 EQKNVPYNY 262


>sp|ARAD_SACS2|ARABINONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KKQKNPPYKF 10
KK K P YK
Sbjct: 117 KKAKKPIYKL 126


>sp|RFCL_THEPD|REPLICATION factor C large subunit|Thermofilum pendens (strain DSM 2475

Query: 3 QKNPPYKF 10
++ PP+KF
Sbjct: 328 RERPPFKF 335


>sp|Y1187_METJA|UNCHARACTERIZED protein MJ1187|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KQKNPP 7
K KNPP
Sbjct: 91 KNKNPP 96




11|Sequence|51|60|PPYKFIHMLK

>sp|NTPTH_THEVO|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PYKFIHMLK 10
P+K +H+LK
Sbjct: 167 PFKVMHVLK 175


>sp|NTPTH_THEAC|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PYKFIHMLK 10
P+K +H+LK
Sbjct: 170 PFKVMHVLK 178


>sp|RFCL_THEPD|REPLICATION factor C large subunit|Thermofilum pendens (strain DSM 2475

Query: 1 PPYKFI 6
PP+KF+
Sbjct: 331 PPFKFV 336


>sp|Y1365_METJA|UNCHARACTERIZED protein MJ1365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PYKFIHMLK 10
P KFI +LK
Sbjct: 172 PEKFIKLLK 180


>sp|G1PDH_METLZ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanocorpusculum labreanum (strain ATCC

Query: 3 YKFIHMLK 10
+KF HML+
Sbjct: 262 HKFAHMLE 269


>sp|TBP_THEKO|TATA-BOX-BINDING protein|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 YKFIHMLK 10
YK I MLK
Sbjct: 81 YKLIEMLK 88


>sp|OTC_PYRAB|ORNITHINE carbamoyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 PPYKFIHML 9
P Y F+H L
Sbjct: 263 PDYMFMHCL 271


>sp|OTCA_PYRFU|ORNITHINE carbamoyltransferase, anabolic|Pyrococcus furiosus (strain ATCC

Query: 1 PPYKFIHML 9
P Y F+H L
Sbjct: 263 PDYMFMHCL 271


>sp|G1PDH_KORCO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Korarchaeum cryptofilum (strain OPF8)

Query: 1 PPYKFIHML 9
P Y+ +H+L
Sbjct: 15 PDYRILHVL 23


>sp|FAU1_SULAC|PROBABLE ribonuclease FAU-1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 KFIHMLK 10
KF HMLK
Sbjct: 229 KFHHMLK 235


>sp|AMTAB_PYRAB|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 3 YKFIHM 8
YKF+H+
Sbjct: 248 YKFLHL 253


>sp|AMTAB_PYRHO|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 3 YKFIHM 8
YKF+H+
Sbjct: 248 YKFLHL 253


>sp|SYK_ARCFU|LYSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PYKFIHM 8
PY++IH+
Sbjct: 259 PYEWIHL 265




12|Sequence|56|65|IHMLKGISIY

>sp|APGM_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IHMLKGISIY 10
+ +LKGI IY
Sbjct: 242 VDLLKGIGIY 251


>sp|APGM_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina acetivorans (strain ATCC

Query: 1 IHMLKGISIY 10
+ +LKGI IY
Sbjct: 242 VDLLKGIGIY 251


>sp|CAS5_HALVD|CRISPR-ASSOCIATED protein Cas5|Haloferax volcanii (strain ATCC 29605

Query: 2 HMLKGISIY 10
H++ G SIY
Sbjct: 150 HLVNGTSIY 158


>sp|PSTB_AERPE|PHOSPHATE import ATP-binding protein PstB|Aeropyrum pernix (strain ATCC

Query: 2 HMLKGIS 8
H+LKGIS
Sbjct: 19 HILKGIS 25


>sp|COXX_HALWD|PROTOHEME IX farnesyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IHMLKGISIY 10
IH++ G+SI+
Sbjct: 131 IHLIGGLSIF 140


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 IHMLKGISIY 10
+HML+G+ Y
Sbjct: 51 LHMLRGMDGY 60


>sp|Y1944_ARCFU|UNCHARACTERIZED protein AF_1944|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IHMLKGISIY 10
+H+++G S+Y
Sbjct: 116 VHVIQGGSVY 125


>sp|THIE_THEAC|THIAMINE-PHOSPHATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IHMLKGISIY 10
IH+L+GI Y
Sbjct: 146 IHVLEGIHKY 155


>sp|GLMM_META3|PHOSPHOGLUCOSAMINE mutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 IHMLKGIS 8
+HM+KG++
Sbjct: 213 MHMIKGLN 220


>sp|BPS2_ACIAM|PROTEIN bps2|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 IHMLKGISIY 10
+ + KG++IY
Sbjct: 17 VELTKGVNIY 26


>sp|PIMT_PYRAR|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 IHMLKGISIY 10
+ ++KG++IY
Sbjct: 103 VEIVKGLAIY 112




13|Sequence|61|70|GISIYPETLS

>sp|Y2403_ARCFU|UNCHARACTERIZED protein AF_2403|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 IYPETLS 10
+YPETLS
Sbjct: 25 VYPETLS 31


>sp|AMT1_HALMT|AMMONIUM transporter Amt1|Haloferax mediterranei (strain ATCC 33500

Query: 1 GISIYPE 7
G+S+YPE
Sbjct: 418 GVSVYPE 424


>sp|PYRC_AERPE|DIHYDROOROTASE pernix (strain ATCC 700893

Query: 1 GISIYPETL 9
G IYPE L
Sbjct: 144 GFKIYPEDL 152


>sp|NEP1_METTP|RIBOSOMAL RNA small subunit methyltransferase|Methanothrix thermoacetophila

Query: 2 ISIYPETLS 10
ISIY E+LS
Sbjct: 195 ISIYEESLS 203


>sp|HIS8_METBU|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GISIYP 6
GISIYP
Sbjct: 63 GISIYP 68


>sp|AROE_THEVO|SHIKIMATE dehydrogenase (NADP(+))|Thermoplasma volcanium (strain ATCC 51530

Query: 2 ISIYPETL 9
I I+PETL
Sbjct: 40 IDIFPETL 47


>sp|PYRC_SULAC|DIHYDROOROTASE acidocaldarius (strain ATCC 33909

Query: 1 GISIYPETL 9
G IYPE L
Sbjct: 131 GYKIYPEDL 139


>sp|GUAAA_HALMA|GMP synthase [glutamine-hydrolyzing] subunit A|Haloarcula marismortui

Query: 3 SIYPET 8
S+YPET
Sbjct: 112 SLYPET 117


>sp|FEN_METLZ|FLAP endonuclease 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 ISIYPETL 9
+S+YPE L
Sbjct: 202 LSVYPERL 209


>sp|PYRC_SULTO|DIHYDROOROTASE tokodaii (strain DSM 16993

Query: 1 GISIYPETL 9
G IYPE L
Sbjct: 131 GYKIYPEDL 139


>sp|RHMD_CALMQ|PUTATIVE L-rhamnonate dehydratase|Caldivirga maquilingensis (strain ATCC

Query: 2 ISIYPE 7
ISIYPE
Sbjct: 45 ISIYPE 50


>sp|DHQS_HALWD|3-DEHYDROQUINATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GISIYPETLS 10
G +PETLS
Sbjct: 94 GTDDFPETLS 103




14|Sequence|66|75|PETLSNKKKI

>sp|OTC_SULAC|ORNITHINE carbamoyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PETLSNKK 8
P+TL NKK
Sbjct: 38 PKTLENKK 45


>sp|Y1138_METJA|UNCHARACTERIZED protein MJ1138|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PETLSNKK 8
P T+SNKK
Sbjct: 100 PVTISNKK 107


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 1 PETLSNKK 8
PE +SNK+
Sbjct: 531 PEDISNKR 538




15|Sequence|71|80|NKKKIIKVRR

>sp|TRUD_NANEQ|PROBABLE tRNA pseudouridine synthase D|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 NKKKIIKVR 9
NK KIIK+R
Sbjct: 266 NKTKIIKIR 274




16|Sequence|76|85|IKVRRDKDGP

>sp|DYR2_HALMA|DIHYDROFOLATE reductase 2|Haloarcula marismortui (strain ATCC 43049

Query: 3 VRRDKDGP 10
+RRD DGP
Sbjct: 53 IRRDLDGP 60


>sp|COFC_METPE|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosphaerula palustris (strain ATCC

Query: 5 RDKDGP 10
RD+DGP
Sbjct: 80 RDQDGP 85


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 2 KVRRDKDG 9
K +RDKDG
Sbjct: 530 KAQRDKDG 537


>sp|MTAA_METBA|METHYLCOBAMIDE:COM methyltransferase MtaA|Methanosarcina barkeri

Query: 1 IKVRRDKDGP 10
IK+ R+K GP
Sbjct: 128 IKIVREKVGP 137


>sp|MTAA_METBF|METHYLCOBAMIDE:COM methyltransferase MtaA|Methanosarcina barkeri (strain Fusaro /

Query: 1 IKVRRDKDGP 10
IK+ R+K GP
Sbjct: 128 IKIVREKVGP 137


>sp|FAU1_METKA|PROBABLE ribonuclease FAU-1|Methanopyrus kandleri (strain AV19 /

Query: 1 IKVRRDKDGP 10
+KVRR+ GP
Sbjct: 350 LKVRREMRGP 359


>sp|GVPD_HALMT|PROTEIN GvpD|Haloferax mediterranei (strain ATCC 33500

Query: 2 KVRRDKDGP 10
+VR+ DGP
Sbjct: 443 EVRKQSDGP 451


>sp|RNZ_THEAC|RIBONUCLEASE Z|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IKVRRDKD 8
+KVRRD D
Sbjct: 300 VKVRRDVD 307




17|Sequence|81|90|DKDGPGREGG

>sp|DHQS_META3|3-DEHYDROQUINATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DKDGPGREG 9
DKDG REG
Sbjct: 276 DKDGMTREG 284


>sp|COFC_ARCPA|2-PHOSPHO-L-LACTATE guanylyltransferase|Archaeoglobus profundus (strain DSM 5631

Query: 4 GPGREGG 10
PGR+GG
Sbjct: 109 APGRKGG 115


>sp|COFC_FERPA|2-PHOSPHO-L-LACTATE guanylyltransferase|Ferroglobus placidus (strain DSM 10642

Query: 1 DKDG-----PGREGG 10
D DG PGR+GG
Sbjct: 99 DTDGDVVIAPGRKGG 113


>sp|C2M5_METJA|PUTATIVE control protein C.MjaVP|Methanocaldococcus jannaschii (strain ATCC

Query: 5 PGREGG 10
PGR+GG
Sbjct: 99 PGRKGG 104


>sp|COFG_META3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 KDGPGRE 8
KD PG+E
Sbjct: 176 KDSPGKE 182


>sp|COFC_ARCFU|2-PHOSPHO-L-LACTATE guanylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GPGREGG 10
PGR+GG
Sbjct: 109 APGRKGG 115


>sp|FLAB1_AERPE|PROBABLE flagellin 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 KDGPGREG 9
K PGREG
Sbjct: 79 KVSPGREG 86


>sp|CCA_METB6|CCA-ADDING enzyme|Methanoregula boonei (strain DSM 21154

Query: 1 DKDGPGRE 8
++D PGRE
Sbjct: 453 ERDRPGRE 460


>sp|LADH_METJA|LACTALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KDGPGREG 9
K G GREG
Sbjct: 438 KSGLGREG 445


>sp|LADH_METM5|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 2 KDGPGREG 9
K G GREG
Sbjct: 439 KSGLGREG 446


>sp|PSB_METBF|PROTEASOME subunit beta|Methanosarcina barkeri (strain Fusaro /

Query: 1 DKDGPG 6
DK+GPG
Sbjct: 114 DKNGPG 119


>sp|LADH_METMP|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KDGPGREG 9
K G GREG
Sbjct: 439 KSGLGREG 446


>sp|LADH_METM7|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 2 KDGPGREG 9
K G GREG
Sbjct: 439 KSGLGREG 446


>sp|BIOD_HALMT|ATP-DEPENDENT dethiobiotin synthetase BioD|Haloferax mediterranei (strain ATCC

Query: 1 DKDGPG 6
D+DGPG
Sbjct: 103 DRDGPG 108


>sp|PSB_METTE|PROTEASOME subunit beta|Methanosarcina thermophila

Query: 1 DKDGPG 6
DK+GPG
Sbjct: 114 DKNGPG 119


>sp|DP2S_PYRAB|DNA polymerase II small subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 KDGPGREG 9
K+G G+EG
Sbjct: 214 KNGSGKEG 221


>sp|FLAB2_AERPE|PROBABLE flagellin 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 KDGPGREG 9
K PGREG
Sbjct: 88 KISPGREG 95




18|Sequence|86|95|GREGGRRNLL

>sp|MFNA_METBF|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina barkeri (strain

Query: 1 GREGGRRNL 9
GREG R+N+
Sbjct: 299 GREGYRKNV 307


>sp|RFCL_METS3|REPLICATION factor C large subunit|Methanobrevibacter smithii (strain ATCC

Query: 1 GREGGRRNL 9
GR G+RNL
Sbjct: 336 GRNRGKRNL 344


>sp|DAPA_METAC|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 REGGRRNL 9
REG RRN+
Sbjct: 21 REGLRRNI 28


>sp|CDC6H_HALMA|ORC1-TYPE DNA replication protein 8|Haloarcula marismortui (strain ATCC 43049

Query: 1 GREGGRR 7
GR+GGR+
Sbjct: 375 GRKGGRK 381


>sp|NPD_PYRAB|NAD-DEPENDENT protein deacylase|Pyrococcus abyssi (strain GE5 /

Query: 2 REGGRRNLL 10
RE G RNL+
Sbjct: 105 REAGTRNLI 113


>sp|NIFK_METMI|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 4 GGRRNLL 10
GGR+NL+
Sbjct: 77 GGRKNLI 83


>sp|NIFK_METMP|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 4 GGRRNLL 10
GGR+NL+
Sbjct: 77 GGRKNLI 83


>sp|AKSA_METMA|HOMOCITRATE synthase AksA|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GGRRNLL 10
GG+RNL+
Sbjct: 327 GGKRNLV 333


>sp|AKSA_METAC|HOMOCITRATE synthase AksA|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 GGRRNLL 10
GG+RNL+
Sbjct: 327 GGKRNLV 333


>sp|NTPTH_IGNH4|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 REGGRR 7
REGGRR
Sbjct: 41 REGGRR 46


>sp|RL14E_DESA1|LARGE ribosomal subunit protein eL14|Desulfurococcus amylolyticus

Query: 1 GREGGRRNLL 10
GRE GR+ ++
Sbjct: 15 GREAGRKCII 24


>sp|TRMJ_METJA|TRNA (cytidine-2'-O-)-methyltransferase TrmJ|Methanocaldococcus

Query: 1 GREGGRRNL 9
G GG RNL
Sbjct: 81 GARGGDRNL 89


>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 1 GREGGR 6
GREGG+
Sbjct: 134 GREGGK 139


>sp|PNCB_THEAC|PUTATIVE nicotinate phosphoribosyltransferase|Thermoplasma acidophilum

Query: 1 GREGGRRNLL 10
G+ GR+N+L
Sbjct: 319 GKMSGRKNVL 328




19|Sequence|91|100|RRNLLVDAAE

>sp|FOLCP_HALVD|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 1 RRNLLVD 7
RRNL+VD
Sbjct: 732 RRNLIVD 738




20|Sequence|96|105|VDAAEAGLLS

>sp|AMPP2_ARCFU|AMP phosphorylase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DAAEAGLL 9
DAAE GLL
Sbjct: 23 DAAELGLL 30


>sp|RNZ_AERPE|RIBONUCLEASE Z|Aeropyrum pernix (strain ATCC 700893

Query: 1 VDAAEAGLL 9
VDA E+G+L
Sbjct: 119 VDARESGVL 127




21|Sequence|101|110|AGLLSRDKDP

>sp|Y521_ARCFU|UNCHARACTERIZED N-acetyltransferase AF_0521|Archaeoglobus fulgidus (strain ATCC

Query: 3 LLSRDKD 9
LLSRDKD
Sbjct: 43 LLSRDKD 49


>sp|AROC_PYRIL|CHORISMATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 AGLLSRDK 8
AGL+ RDK
Sbjct: 354 AGLIRRDK 361


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 2 GLLSRDKDP 10
GL+S++K P
Sbjct: 720 GLISKEKTP 728


>sp|Y1593_METB6|UPF0200 protein Mboo_1593|Methanoregula boonei (strain DSM 21154

Query: 2 GLLSRDK 8
GLL+RDK
Sbjct: 134 GLLTRDK 140


>sp|AROC_PYRNV|CHORISMATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 AGLLSRDK 8
AGL+ RDK
Sbjct: 354 AGLIRRDK 361


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 2 GLLSRDKDP 10
GL+S DK P
Sbjct: 704 GLISEDKYP 712




22|Sequence|106|115|RDKDPRGPSS

>sp|GSA_HALSA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 700922

Query: 2 DKDPRGPSS 10
D D RGPSS
Sbjct: 155 DADHRGPSS 163


>sp|GSA_HALS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 29341

Query: 2 DKDPRGPSS 10
D D RGPSS
Sbjct: 155 DADHRGPSS 163


>sp|RL6_METHJ|LARGE ribosomal subunit protein uL6|Methanospirillum hungatei JF-1

Query: 1 RDKDPR 6
RD+DPR
Sbjct: 157 RDRDPR 162


>sp|TRUB_PYRIL|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum islandicum (strain DSM

Query: 5 PRGPSS 10
PRGPSS
Sbjct: 43 PRGPSS 48


>sp|ADPP_METJA|ADP-RIBOSE pyrophosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DKDPRG 7
D+DPRG
Sbjct: 111 DRDPRG 116


>sp|TRUB_PYRNV|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum neutrophilum (strain

Query: 5 PRGPSS 10
PRGPSS
Sbjct: 43 PRGPSS 48


>sp|FLAB4_THEKO|FLAGELLIN B4|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DKDPRGPSS 10
DKD GPS+
Sbjct: 179 DKDGIGPST 187


>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 RDKDPRG 7
RD DPRG
Sbjct: 38 RDADPRG 44


>sp|TRUB_PYRAR|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum arsenaticum (strain DSM

Query: 5 PRGPSS 10
PRGPSS
Sbjct: 43 PRGPSS 48


>sp|TRUB_PYRAE|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum aerophilum (strain ATCC

Query: 5 PRGPSS 10
PRGPSS
Sbjct: 43 PRGPSS 48


>sp|TRUB_METMA|PROBABLE tRNA pseudouridine synthase B|Methanosarcina mazei (strain ATCC

Query: 5 PRGPSS 10
PRGP+S
Sbjct: 50 PRGPTS 55


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RDKDPRGPSS 10
R+ DP+ P S
Sbjct: 778 RNVDPKAPES 787


>sp|Y1056_AERPE|PROTEIN APE_1056.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 RDKDPRGP 8
R+ +PRGP
Sbjct: 204 RETEPRGP 211


>sp|TRUB_METJA|PROBABLE tRNA pseudouridine synthase B|Methanocaldococcus jannaschii

Query: 5 PRGPSS 10
PRGP+S
Sbjct: 53 PRGPTS 58


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DKDPRG 7
+KDPRG
Sbjct: 27 EKDPRG 32


>sp|RS4E_AERPE|SMALL ribosomal subunit protein eS4|Aeropyrum pernix (strain ATCC 700893

Query: 1 RDKDPRGP 8
R KDPR P
Sbjct: 151 RVKDPRNP 158


>sp|RL4_SULTO|LARGE ribosomal subunit protein uL4|Sulfurisphaera tokodaii (strain DSM

Query: 1 RDKDPRGP 8
R K+P+GP
Sbjct: 195 RYKEPKGP 202




23|Sequence|111|120|RGPSSGSCID

>sp|Y1574_ARCFU|UNCHARACTERIZED protein AF_1574|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GPSSGSC 8
GP +GSC
Sbjct: 314 GPQNGSC 320


>sp|KAE1_METAR|TRNA N6-adenosine threonylcarbamoyltransferase|Methanocella arvoryzae

Query: 1 RGPSSGSCI 9
RGP G C+
Sbjct: 75 RGPGLGPCL 83


>sp|KAE1B_HALWD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 RGPSSGSCI 9
RGP G C+
Sbjct: 81 RGPGLGPCL 89


>sp|KAE1B_HALMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 RGPSSGSCI 9
RGP G C+
Sbjct: 91 RGPGLGPCL 99


>sp|KAE1B_HALSA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 RGPSSGSCI 9
RGP G C+
Sbjct: 76 RGPGLGPCL 84


>sp|KAE1B_NATPD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 RGPSSGSCI 9
RGP G C+
Sbjct: 82 RGPGLGPCL 90


>sp|KAE1_METBU|TRNA N6-adenosine threonylcarbamoyltransferase|Methanococcoides

Query: 1 RGPSSGSCI 9
+GP G+C+
Sbjct: 80 QGPGLGACL 88




24|Sequence|116|125|GSCIDQLPIK

>sp|EF1A_METTH|ELONGATION factor 1-alpha|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GSCIDQLPIK 10
G CID +P K
Sbjct: 404 GMCIDLVPAK 413


>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 CIDQLP 8
CI+QLP
Sbjct: 433 CIEQLP 438


>sp|NEP1_METTP|RIBOSOMAL RNA small subunit methyltransferase|Methanothrix thermoacetophila

Query: 1 GSCIDQLP 8
G+CI ++P
Sbjct: 138 GACIGEIP 145


>sp|EF1A_METS3|ELONGATION factor 1-alpha|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GSCIDQLPIK 10
G CID P K
Sbjct: 404 GLCIDVTPAK 413


>sp|ASSTI_METJA|L-ASPARTATE semialdehyde sulfurtransferase iron-sulfur

Query: 1 GSCIDQLPI 9
G CI Q PI
Sbjct: 86 GCCITQCPI 94


>sp|FPOI_METMA|F(420)H(2) dehydrogenase subunit I|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GSCIDQLP 8
G CIDQ P
Sbjct: 129 GLCIDQCP 136


>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 1 GSCIDQLPIK 10
GSC++ PI+
Sbjct: 258 GSCVEVCPIE 267


>sp|HDRA_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 1 GSCIDQLPIK 10
GSC++ PI+
Sbjct: 259 GSCVEVCPIE 268




25|Sequence|121|130|QLPIKMDYGE

>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QLPIKMDYGE 10
+LPI++DY +
Sbjct: 1077 KLPIQLDYSK 1086


>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 PIKMDYGE 10
PI++DYG+
Sbjct: 158 PIEVDYGQ 165


>sp|NARH_HALMT|RESPIRATORY nitrate reductase subunit beta|Haloferax mediterranei (strain

Query: 1 QLPIKMDYGE 10
Q+P K DYG+
Sbjct: 88 QIPDKEDYGD 97


>sp|DHE4_PYRCJ|NADP(+)-DEPENDENT glutamate dehydrogenase|Pyrobaculum calidifontis (strain DSM

Query: 2 LPIKMDYG 9
+P+KMD G
Sbjct: 43 IPVKMDNG 50


>sp|DHE2_PYRCJ|NAD(+)-DEPENDENT glutamate dehydrogenase|Pyrobaculum calidifontis (strain DSM

Query: 2 LPIKMDYGE 10
+P+KMD G+
Sbjct: 46 IPVKMDDGK 54


>sp|KATG2_HALMA|CATALASE-PEROXIDASE 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 LPIKMDYGE 10
LPIK YG+
Sbjct: 137 LPIKQKYGQ 145


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LPIKMDYGE 10
LPIK DY E
Sbjct: 149 LPIKNDYIE 157


>sp|PCNA_THESM|DNA polymerase sliding clamp|Thermococcus sibiricus (strain DSM 12597

Query: 1 QLPIKMDY 8
++P++MDY
Sbjct: 224 EMPLQMDY 231


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LPIKMDYGE 10
+PIK DY E
Sbjct: 148 MPIKRDYME 156


>sp|PCNA_THEFM|DNA polymerase sliding clamp|Thermococcus fumicolans

Query: 1 QLPIKMDY 8
++P++MDY
Sbjct: 224 EMPLQMDY 231


>sp|PCNA_THEGJ|DNA polymerase sliding clamp|Thermococcus gammatolerans (strain DSM

Query: 1 QLPIKMDY 8
++P++MDY
Sbjct: 224 EMPLQMDY 231


>sp|PCNA_HALLT|DNA polymerase sliding clamp|Halorubrum lacusprofundi (strain ATCC

Query: 1 QLPIKMDYG 9
+ P+K+ YG
Sbjct: 220 EFPVKLHYG 228


>sp|DHE_HALSI|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (Halobacterium halobium)

Query: 2 LPIKMDYG 9
LP++MD G
Sbjct: 42 LPVRMDDG 49


>sp|DHE_HALSA|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (strain ATCC 700922

Query: 2 LPIKMDYG 9
LP++MD G
Sbjct: 42 LPVRMDDG 49


>sp|MOAA_METM5|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C5 /

Query: 1 QLPIKMDY 8
QLP MDY
Sbjct: 164 QLPAIMDY 171


>sp|MOAA_METMP|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain DSM 14266

Query: 1 QLPIKMDY 8
QLP MDY
Sbjct: 164 QLPAIMDY 171


>sp|MOAA_METM7|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C7 /

Query: 1 QLPIKMDY 8
QLP MDY
Sbjct: 164 QLPAIMDY 171


>sp|MOAA_METM6|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C6 /

Query: 1 QLPIKMDY 8
QLP MDY
Sbjct: 164 QLPAIMDY 171


>sp|RPO12_METBU|DNA-DIRECTED RNA polymerase subunit Rpo12|Methanococcoides burtonii (strain

Query: 1 QLPIKMDYG 9
+ P+++DYG
Sbjct: 9 KRPVEIDYG 17


>sp|KATG_METHJ|CATALASE-PEROXIDASE hungatei JF-1 (strain ATCC

Query: 3 PIKMDYGE 10
PIK YG+
Sbjct: 139 PIKQKYGQ 146


>sp|Y099_SACS2|UPF0173 metal-dependent hydrolase SSO0099|Saccharolobus solfataricus

Query: 3 PIKMDY 8
P+K+DY
Sbjct: 34 PVKLDY 39


>sp|GUAAB_ARCFU|GMP synthase [glutamine-hydrolyzing] subunit B|Archaeoglobus fulgidus

Query: 3 PIKMDY 8
PIK+DY
Sbjct: 263 PIKIDY 268




26|Sequence|126|135|MDYGEELRSP

>sp|RIBB_ARCFU|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MDYGEELRSP 10
+D+G E RSP
Sbjct: 141 VDFGREFRSP 150


>sp|RIBB_METJA|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 DYGEELRSP 10
D+G+E RSP
Sbjct: 137 DFGKEFRSP 145


>sp|PUR7_THEAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DYGEELRSP 10
DYGE+L SP
Sbjct: 129 DYGEKLPSP 137


>sp|PUR5_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DYGEELRSP 10
D+GEEL P
Sbjct: 194 DWGEELMRP 202


>sp|Y426_ARCFU|UNCHARACTERIZED protein AF_0426|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DYGEELRS 9
+YGE+LRS
Sbjct: 264 NYGEKLRS 271


>sp|ENO_NATPD|ENOLASE pharaonis (strain ATCC 35678

Query: 3 YGEELRSP 10
YG+E RSP
Sbjct: 246 YGDETRSP 253


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 YGEELRSP 10
YG+E+R P
Sbjct: 457 YGQEIRVP 464


>sp|AMPPA_METVS|AMP phosphorylase|Methanococcus vannielii (strain ATCC 35089

Query: 3 YGEELRSP 10
Y EE+RSP
Sbjct: 415 YVEEVRSP 422


>sp|MCH_ARCFU|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MDYGEELR 8
+DY EELR
Sbjct: 16 LDYEEELR 23


>sp|PUR2_METJA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DYGEELRS 9
+YGEEL S
Sbjct: 128 EYGEELES 135


>sp|PYCA_ARCFU|PYRUVATE carboxylase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YGEELR 8
YGEELR
Sbjct: 315 YGEELR 320


>sp|Y602_METJA|UNCHARACTERIZED protein MJ0602|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MDYGEELRS 9
+DY E+RS
Sbjct: 138 LDYNSEVRS 146


>sp|SYDND_METST|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 MDYGEEL 7
M+YGE+L
Sbjct: 305 MNYGEDL 311




27|Sequence|131|140|ELRSPITSLT

>sp|ADEC_METST|ADENINE deaminase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ELRSPITSLT 10
EL SP TSL+
Sbjct: 500 ELSSPFTSLS 509


>sp|DAPA_HALMA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 LRSPITSLT 10
LRSP+T L+
Sbjct: 270 LRSPLTRLS 278


>sp|RFCL_METST|REPLICATION factor C large subunit|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ELRSPITSL 9
+LRS ITSL
Sbjct: 194 DLRSAITSL 202


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 1 ELRSPITSLT 10
E+R+PIT T
Sbjct: 331 EIRNPITKNT 340




28|Sequence|136|145|ITSLTPGESK

>sp|Y1506_METJA|UNCHARACTERIZED protein MJ1506|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ITSLTPGES 9
I+ L PGES
Sbjct: 123 ISHLNPGES 131


Query: 2 TSLTPGESK 10
TS+ PG++K
Sbjct: 195 TSIIPGKTK 203


>sp|PCNA_NATPD|DNA polymerase sliding clamp|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ITSLTPGESK 10
+ LTPGE++
Sbjct: 183 LIDLTPGEAR 192


>sp|APE1_SULTO|PROBABLE aminopeptidase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ITSLTPGESK 10
I + TPG+SK
Sbjct: 186 ILATTPGKSK 195


>sp|Y1561_METJA|UNCHARACTERIZED protein MJ1561|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ITSLTPGES 9
I+ L PGES
Sbjct: 82 ISHLNPGES 90


>sp|AKSF_METJA|HOMOISOCITRATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ITSLTPGESK 10
ITS PGE K
Sbjct: 68 ITSPKPGEVK 77


>sp|PYLB_METAC|3-METHYLORNITHINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ITSLTPGESK 10
+TS+ P +SK
Sbjct: 297 VTSILPSDSK 306


>sp|DHQS_ARCFU|3-DEHYDROQUINATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ITSLTPGE 8
+T +TPGE
Sbjct: 169 VTLMTPGE 176


>sp|URE2_NATPD|UREASE subunit beta|Natronomonas pharaonis (strain ATCC 35678

Query: 3 SLTPGE 8
SLTPGE
Sbjct: 8 SLTPGE 13


>sp|Y2028_ARCFU|UNCHARACTERIZED protein AF_2028|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ITSLTPGESK 10
I L PGESK
Sbjct: 133 IPRLGPGESK 142


>sp|LYSZ_SACS2|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ITSLTPGESK 10
I LTP E+K
Sbjct: 202 INRLTPSEAK 211


>sp|GCST_NATPD|PROBABLE aminomethyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ITSLTPGES 9
+ SL PGE+
Sbjct: 75 VASLAPGEA 83


>sp|HLY_NATA1|HALOLYSIN asiatica (strain ATCC 700177

Query: 1 ITSLTPGESK 10
+TS TPG S+
Sbjct: 30 VTSATPGRSR 39




29|Sequence|141|150|PGESKTTSPS

>sp|RS19E_AERPE|SMALL ribosomal subunit protein eS19|Aeropyrum pernix (strain ATCC 700893

Query: 1 PGESKTTSPS 10
PG +T SP+
Sbjct: 117 PGRGRTISPA 126




30|Sequence|146|155|TTSPSSPEED

>sp|COXX_HALWD|PROTOHEME IX farnesyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 TSPSSPEED 10
T+PS PE D
Sbjct: 163 TTPSKPEPD 171


>sp|ENDA_SULAC|TRNA-SPLICING endonuclease|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 TSPSSPEE 9
T P SPE+
Sbjct: 35 TKPKSPED 42


>sp|METXA_METVS|HOMOSERINE O-acetyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 TTSPSSPEE 9
TTS SSP++
Sbjct: 177 TTSSSSPQQ 185




31|Sequence|151|160|SPEEDVMLGS

>sp|ALF1_THEKO|FRUCTOSE-BISPHOSPHATE aldolase class 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SPEEDVML 8
SP+EDVM+
Sbjct: 127 SPQEDVMM 134


>sp|HIS5_METKA|IMIDAZOLE glycerol phosphate synthase subunit|Methanopyrus kandleri (strain

Query: 1 SPEEDVMLG 9
+PE+DV+LG
Sbjct: 146 APEDDVVLG 154


>sp|ALF1_PYRFU|FRUCTOSE-BISPHOSPHATE aldolase class 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SPEEDVML 8
SP+EDVM+
Sbjct: 127 SPQEDVMM 134


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 SPEEDVMLGS 10
SPE+D+ +GS
Sbjct: 660 SPEKDLPVGS 669


>sp|G3PP_PYRFU|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PEEDVMLG 9
PEE +M+G
Sbjct: 169 PEEAIMVG 176


>sp|SPSS_METKA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 SPEEDVMLGS 10
SP+ D M+GS
Sbjct: 205 SPKPDFMVGS 214


>sp|DNLI2_KORCO|DNA ligase 2|Korarchaeum cryptofilum (strain OPF8)

Query: 1 SPEEDV 6
SPEEDV
Sbjct: 465 SPEEDV 470


>sp|ALF1_PYRAB|FRUCTOSE-BISPHOSPHATE aldolase class 1|Pyrococcus abyssi (strain GE5 /

Query: 1 SPEEDVML 8
SP+ED M+
Sbjct: 127 SPQEDAMM 134


>sp|ALF1_PYRHO|FRUCTOSE-BISPHOSPHATE aldolase class 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SPEEDVML 8
SP+ED M+
Sbjct: 127 SPQEDTMI 134




32|Sequence|156|165|VMLGSLTFSV

***** No hits found ******


33|Sequence|161|170|LTFSVDYNFP

>sp|TF2B_METJA|TRANSCRIPTION initiation factor IIB|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LTFSVDYNFP 10
+T+SVDYN P
Sbjct: 97 MTYSVDYNEP 106


>sp|COBQ_ARCFU|PROBABLE cobyric acid synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 VDYNFP 10
+DYNFP
Sbjct: 227 LDYNFP 232


>sp|Y946_ARCFU|UNCHARACTERIZED protein AF_0946|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LTFSVDYNFP 10
LTF VD N P
Sbjct: 846 LTFEVDVNTP 855


>sp|LYSY_PYRHO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 LTFSVDYNF 9
L F+ DYNF
Sbjct: 54 LRFTSDYNF 62


>sp|APT_METM5|ADENINE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 2 TFSVDY 7
TFSVDY
Sbjct: 87 TFSVDY 92


>sp|APT_METMP|ADENINE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 2 TFSVDY 7
TFSVDY
Sbjct: 87 TFSVDY 92


>sp|APT_METM7|ADENINE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 2 TFSVDY 7
TFSVDY
Sbjct: 87 TFSVDY 92


>sp|SYTC_METS5|THREONINE--TRNA ligase catalytic subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 TFSVDYNFP 10
T VD+N P
Sbjct: 377 TIQVDFNLP 385


>sp|SYTC_SACS2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 TFSVDYNFP 10
T VD+N P
Sbjct: 381 TIQVDFNLP 389


>sp|SYTC_SACI7|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 TFSVDYNFP 10
T VD+N P
Sbjct: 381 TIQVDFNLP 389


>sp|SYTC_SACI1|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 TFSVDYNFP 10
T VD+N P
Sbjct: 381 TIQVDFNLP 389


>sp|SYTC_SACI2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain L.S.2.15

Query: 2 TFSVDYNFP 10
T VD+N P
Sbjct: 381 TIQVDFNLP 389


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 4 SVDYNFP 10
+VDYN P
Sbjct: 1011 AVDYNIP 1017


>sp|SYTC_SACI4|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 2 TFSVDYNFP 10
T VD+N P
Sbjct: 381 TIQVDFNLP 389


>sp|SYTC_SACI6|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 2 TFSVDYNFP 10
T VD+N P
Sbjct: 381 TIQVDFNLP 389


>sp|SYTC_SACI3|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.27)

Query: 2 TFSVDYNFP 10
T VD+N P
Sbjct: 381 TIQVDFNLP 389


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 4 SVDYNFP 10
+VDYN P
Sbjct: 1012 AVDYNIP 1018


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 4 SVDYNFP 10
+VDYN P
Sbjct: 1012 AVDYNIP 1018


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 4 SVDYNFP 10
+VDYN P
Sbjct: 1012 AVDYNIP 1018


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 4 SVDYNFP 10
+VDYN P
Sbjct: 1012 AVDYNIP 1018


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 4 SVDYNFP 10
+VDYN P
Sbjct: 1012 AVDYNIP 1018


>sp|SYTC_SULTO|THREONINE--TRNA ligase catalytic subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 TFSVDYNFP 10
T VD+N P
Sbjct: 376 TIQVDFNLP 384


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 4 SVDYNFP 10
+VDYN P
Sbjct: 1012 AVDYNIP 1018


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 4 SVDYNFP 10
+VDYN P
Sbjct: 1012 AVDYNIP 1018


>sp|SYTC_SULAC|THREONINE--TRNA ligase catalytic subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 2 TFSVDYNFP 10
T VD+N P
Sbjct: 385 TIQVDFNLP 393


>sp|APT_METVS|ADENINE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 2 TFSVDY 7
TFSVDY
Sbjct: 87 TFSVDY 92


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 4 SVDYNFP 10
+VDYN P
Sbjct: 1012 AVDYNVP 1018


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 LTFSVDYN 8
LTF+VD N
Sbjct: 7589 LTFTVDSN 7596


>sp|SYFB_METHJ|PHENYLALANINE--TRNA ligase beta subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LTFSVDYNF 9
+TFSVD N
Sbjct: 82 ITFSVDENL 90


>sp|NADE_STAMF|NH(3)-DEPENDENT NAD(+) synthetase|Staphylothermus marinus (strain ATCC 43588

Query: 3 FSVDYNFP 10
F+++YN P
Sbjct: 110 FNINYNIP 117


>sp|AATA_NANEQ|A-TYPE ATP synthase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 5 VDYNFP 10
+DYN+P
Sbjct: 194 LDYNYP 199


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 SVDYNF 9
+VDYNF
Sbjct: 578 TVDYNF 583


>sp|QOX2_SULAC|QUINOL oxidase subunit 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 TFSVDYNFP 10
+FS+DY P
Sbjct: 35 SFSLDYGLP 43


>sp|HMGCS_PICTO|HYDROXYMETHYLGLUTARYL-COA synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 TFSVDYNF 9
TF+ DY F
Sbjct: 103 TFAADYEF 110


>sp|COBQ_PICTO|PROBABLE cobyric acid synthase|Picrophilus torridus (strain ATCC 700027

Query: 4 SVDYNF 9
S+DYNF
Sbjct: 233 SLDYNF 238




34|Sequence|166|175|DYNFPKKALV

>sp|IDI2_METAC|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DYNFPKKAL 9
DY+ PK AL
Sbjct: 357 DYSLPKNAL 365


>sp|COBQ_ARCFU|PROBABLE cobyric acid synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DYNFPKK 7
DYNFP +
Sbjct: 228 DYNFPSE 234


>sp|MFNA_METTP|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanothrix

Query: 2 YNFPKKAL 9
Y FP+K L
Sbjct: 2 YTFPEKGL 9


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 2 YNFPK 6
YNFPK
Sbjct: 212 YNFPK 216


>sp|LEUD_PYRCJ|3-ISOPROPYLMALATE dehydratase small subunit|Pyrobaculum calidifontis (strain DSM

Query: 1 DYNFPKKA 8
D FPKKA
Sbjct: 42 DPEFPKKA 49


>sp|LEUD_PYRAE|3-ISOPROPYLMALATE dehydratase small subunit|Pyrobaculum aerophilum (strain ATCC

Query: 1 DYNFPKKA 8
D FPKKA
Sbjct: 42 DPEFPKKA 49


>sp|ASST_METJA|L-ASPARTATE semialdehyde sulfurtransferase|Methanocaldococcus jannaschii

Query: 1 DYNFPKK 7
DY FP++
Sbjct: 300 DYGFPRR 306


>sp|LEUD_PYRIL|3-ISOPROPYLMALATE dehydratase small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DYNFPKKA 8
D FPKKA
Sbjct: 42 DPEFPKKA 49


>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 2 YNFPKKALV 10
Y FP+K L+
Sbjct: 335 YQFPQKILM 343


>sp|SYR_THEKO|ARGININE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DYNFPKKALV 10
DY F KALV
Sbjct: 96 DYEFFGKALV 105


>sp|Y1060_METJA|UNCHARACTERIZED protein MJ1060|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YNFPKKALV 10
YNFPK ++
Sbjct: 379 YNFPKDKVI 387


>sp|GCSPB_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 DYNFPK 6
DYN PK
Sbjct: 316 DYNVPK 321


>sp|LEUD_PYRNV|3-ISOPROPYLMALATE dehydratase small subunit|Pyrobaculum neutrophilum (strain DSM

Query: 1 DYNFPKKA 8
D FPKKA
Sbjct: 42 DPEFPKKA 49


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 DYNFPK 6
DYN PK
Sbjct: 316 DYNVPK 321


>sp|GCSPB_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 1 DYNFPK 6
DYN PK
Sbjct: 316 DYNVPK 321




35|Sequence|171|180|KKALVVTIQE

***** No hits found ******


36|Sequence|176|185|VTIQEAHGLP

>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 VTIQEAHGLP 10
+T+ ++HG+P
Sbjct: 449 ITLYDSHGIP 458


>sp|XPD_THEAC|ATP-DEPENDENT DNA helicase XPD|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VTIQEAHGLP 10
+ + EAH LP
Sbjct: 190 IILDEAHNLP 199


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VTIQEAHGLP 10
+T+ ++HG+P
Sbjct: 450 ITLYDSHGIP 459


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 VTIQEAHGLP 10
+T+ ++HG+P
Sbjct: 449 ITLYDSHGIP 458


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VTIQEAHGLP 10
+T+ ++HG+P
Sbjct: 449 ITLYDSHGIP 458


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 VTIQEAHGLP 10
+T+ ++HG+P
Sbjct: 438 ITLYDSHGVP 447


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 VTIQEAHGLP 10
V + E+HG+P
Sbjct: 442 VKLYESHGVP 451


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VTIQEAHGLP 10
+ + ++HGLP
Sbjct: 434 IELYDSHGLP 443


>sp|MTRD_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina acetivorans (strain

Query: 5 EAHGLP 10
E HGLP
Sbjct: 131 EGHGLP 136


>sp|RS5_SULTO|SMALL ribosomal subunit protein uS5|Sulfurisphaera tokodaii (strain DSM

Query: 2 TIQEAHGLP 10
T EAH LP
Sbjct: 127 TCGEAHSLP 135


>sp|MTRD_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina barkeri (strain Fusaro

Query: 5 EAHGLP 10
E HGLP
Sbjct: 131 EGHGLP 136


>sp|MTRD_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanothermobacter marburgensis

Query: 4 QEAHGLP 10
E HGLP
Sbjct: 123 TEGHGLP 129


>sp|MTRD_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanothermobacter

Query: 4 QEAHGLP 10
E HGLP
Sbjct: 123 TEGHGLP 129


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VTIQEAHGLP 10
VT+ +++GLP
Sbjct: 441 VTLYDSYGLP 450


>sp|IF6_HALLT|TRANSLATION initiation factor 6|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 VTIQEAHGLP 10
VTI+E G+P
Sbjct: 122 VTIRETLGVP 131


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 IQEAHGLP 10
+ +AHG+P
Sbjct: 435 LYDAHGIP 442


>sp|SPSS_METMJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VTIQEAHGLP 10
V ++EA G+P
Sbjct: 115 VAVEEAGGIP 124


>sp|PORB_METJA|PYRUVATE synthase subunit PorB|Methanocaldococcus jannaschii (strain ATCC

Query: 3 IQEAHGLP 10
I AHG+P
Sbjct: 176 IMAAHGIP 183


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 1 VTIQEAHGL 9
++I+E HGL
Sbjct: 435 MSIEEIHGL 443


>sp|Y1511_METMJ|UPF0316 protein Memar_1511|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VTIQEAHG 8
VT+ +AHG
Sbjct: 126 VTVLDAHG 133




37|Sequence|181|190|AHGLPVMDDQ

>sp|M556_METJA|METHYLATED protein MJ0556|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GLPVMDDQ 10
G+PV+DD+
Sbjct: 56 GMPVVDDR 63


>sp|IF2P_AERPE|PROBABLE translation initiation factor IF-2|Aeropyrum pernix (strain ATCC

Query: 3 GLPVMDDQ 10
G PVMD Q
Sbjct: 507 GYPVMDSQ 514


>sp|PGK_ARCFU|PHOSPHOGLYCERATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GLPVMDD 9
GLP +DD
Sbjct: 5 GLPTLDD 11


>sp|Y1115_HALSA|PROBABLE S-adenosyl-L-methionine-binding protein VNG_1115H|Halobacterium

Query: 1 AHGLPVMD 8
AHG PV+D
Sbjct: 111 AHGSPVLD 118


>sp|HIS8_PYRFU|HISTIDINOL-PHOSPHATE aminotransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HGLPVMD 8
HG+PV D
Sbjct: 114 HGIPVKD 120


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 3 GLPVMDDQ 10
G+PV DDQ
Sbjct: 15 GIPVGDDQ 22


>sp|THIM_HALWD|HYDROXYETHYLTHIAZOLE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 GLPVMDD 9
GLPVM D
Sbjct: 51 GLPVMSD 57


>sp|ASSY_PYRFU|ARGININOSUCCINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HGLPVMD 8
HG+PV D
Sbjct: 159 HGIPVSD 165


>sp|SURE_METMP|5'-NUCLEOTIDASE SurE|Methanococcus maripaludis (strain DSM 14266

Query: 3 GLPVMDDQ 10
G PVMD++
Sbjct: 216 GYPVMDEE 223


>sp|CDC62_THEAC|ORC1-TYPE DNA replication protein 2|Thermoplasma acidophilum (strain ATCC

Query: 2 HGLPVMDDQ 10
+GL VMDD+
Sbjct: 350 YGLLVMDDR 358


>sp|SURE_METM7|5'-NUCLEOTIDASE SurE|Methanococcus maripaludis (strain C7 /

Query: 3 GLPVMDDQ 10
G PVMD++
Sbjct: 218 GYPVMDEE 225


>sp|PGK2_THEKO|2-PHOSPHOGLYCERATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 HGLPVMDD 9
HG+PV+++
Sbjct: 260 HGIPVIEN 267


>sp|FEN_METLZ|FLAP endonuclease 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 AHGLPVMDDQ 10
A G P+MD Q
Sbjct: 43 ADGAPLMDGQ 52


>sp|Y922_METJA|UNCHARACTERIZED protein MJ0922|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LPVMDDQ 10
LPV+DD+
Sbjct: 42 LPVIDDE 48


>sp|IMDH_NITMS|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 HGLPVMDD 9
HG+P++ D
Sbjct: 327 HGIPIISD 334


>sp|SUCD_METJA|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Methanocaldococcus jannaschii

Query: 2 HGLPVMD 8
HG+PV D
Sbjct: 54 HGVPVFD 60


>sp|AROC_PYRAE|CHORISMATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AHGLPVMDDQ 10
A LPV+DD+
Sbjct: 177 AKPLPVVDDE 186


>sp|THIM_NATPD|HYDROXYETHYLTHIAZOLE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 GLPVMDD 9
GLPVM D
Sbjct: 45 GLPVMSD 51


>sp|PGK2_METTH|2-PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 HGLPVMDD 9
HG+PV+++
Sbjct: 269 HGVPVIEN 276


>sp|ASST_METJA|L-ASPARTATE semialdehyde sulfurtransferase|Methanocaldococcus jannaschii

Query: 3 GLPVMDD 9
G+PV+DD
Sbjct: 482 GVPVVDD 488


>sp|IMDH_METJA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GLPVMDDQ 10
GLPV+D++
Sbjct: 123 GLPVVDNE 130


>sp|SURE_METM5|5'-NUCLEOTIDASE SurE|Methanococcus maripaludis (strain C5 /

Query: 3 GLPVMDDQ 10
G P+MD++
Sbjct: 218 GYPIMDEE 225


>sp|SURE_METM6|5'-NUCLEOTIDASE SurE|Methanococcus maripaludis (strain C6 /

Query: 3 GLPVMDDQ 10
G P+MD++
Sbjct: 218 GYPIMDEE 225


>sp|LEUC_PYRHO|3-ISOPROPYLMALATE dehydratase large subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 HGLPVMD 8
HG+PV++
Sbjct: 77 HGIPVVE 83


>sp|ASSY_PYRAE|ARGININOSUCCINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HGLPVMDDQ 10
HGLPV ++
Sbjct: 162 HGLPVGEEH 170


>sp|IF2P_THEPD|PROBABLE translation initiation factor IF-2|Thermofilum pendens (strain DSM

Query: 2 HGLPVMDDQ 10
HG+PV ++
Sbjct: 433 HGIPVFQER 441


>sp|Y1426_METJA|UNCHARACTERIZED protein MJ1426|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LPVMDDQ 10
LPV+DD+
Sbjct: 145 LPVVDDE 151


>sp|FEN_METHJ|FLAP endonuclease 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 GLPVMDD 9
G P+MDD
Sbjct: 45 GTPLMDD 51


>sp|AROD_PYRAE|3-DEHYDROQUINATE dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GLPVMDD 9
GLP+ DD
Sbjct: 264 GLPIYDD 270


>sp|LEUC2_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 2 HGLPVMD 8
HG+PV++
Sbjct: 77 HGIPVVE 83


>sp|DNLJ_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 AHGLPVMDDQ 10
A G+PV+D++
Sbjct: 684 AEGVPVVDEE 693




38|Sequence|186|195|VMDDQTQGSD

***** No hits found ******


39|Sequence|191|200|TQGSDPYIKM

>sp|HELS_PYRAB|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus abyssi (strain GE5 /

Query: 2 QGSDPYI 8
QG DPY+
Sbjct: 445 QGKDPYM 451


>sp|MPTA_METTP|GTP cyclohydrolase MptA|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 TQGSDPYIK 9
T G DP++K
Sbjct: 138 TSGPDPHVK 146


>sp|HELS_PYRHO|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 QGSDPY 7
QG DPY
Sbjct: 445 QGKDPY 450


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GSDPYIKM 10
GSDPY +
Sbjct: 29 GSDPYFHL 36


>sp|SYK2_METAC|LYSINE--TRNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TQGSDPY 7
+QG DPY
Sbjct: 41 SQGLDPY 47


>sp|PYRF_THEVO|OROTIDINE 5'-phosphate decarboxylase|Thermoplasma volcanium (strain ATCC

Query: 2 QGSDPY 7
QG DPY
Sbjct: 168 QGGDPY 173


>sp|AMPPA_METMA|AMP phosphorylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TQGSDPYIK 9
QG DP IK
Sbjct: 396 AQGGDPNIK 404


>sp|AMPPA_THEKO|AMP phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 QGSDPYIK 9
QG DP IK
Sbjct: 397 QGGDPNIK 404


>sp|AMPPA_PYRAB|AMP phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 2 QGSDPYIK 9
QG DP IK
Sbjct: 397 QGGDPNIK 404


>sp|AMPPA_THEGJ|AMP phosphorylase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 QGSDPYIK 9
QG DP IK
Sbjct: 397 QGGDPNIK 404


>sp|PYLB_METAC|3-METHYLORNITHINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TQGSDPY 7
T G DPY
Sbjct: 114 TMGEDPY 120


>sp|KDGK2_HALVD|2-DEHYDRO-3-DEOXYGALACTONOKINASE volcanii (strain ATCC 29605

Query: 1 TQGSDPYIK 9
T G +PY++
Sbjct: 72 THGVEPYVR 80


>sp|PYLB_METBF|3-METHYLORNITHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 TQGSDPY 7
T G DPY
Sbjct: 114 TMGEDPY 120


>sp|AMPPA_THESM|AMP phosphorylase|Thermococcus sibiricus (strain DSM 12597

Query: 2 QGSDPYIK 9
QG DP IK
Sbjct: 397 QGGDPNIK 404


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 QGSDPYIK 9
QG DP IK
Sbjct: 396 QGGDPNIK 403


>sp|AMPPA_METB6|AMP phosphorylase|Methanoregula boonei (strain DSM 21154

Query: 2 QGSDPYIK 9
QG DP +K
Sbjct: 399 QGGDPKVK 406


>sp|AMPPA_PYRHO|AMP phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 QGSDPYIK 9
QG DP IK
Sbjct: 397 QGGDPNIK 404


>sp|AMPPA_METMJ|AMP phosphorylase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 QGSDPYIK 9
QG DP +K
Sbjct: 398 QGGDPNVK 405


>sp|TRUB_METM5|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain

Query: 3 GSDPY 7
GSDPY
Sbjct: 16 GSDPY 20


>sp|TRUB_METMP|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain

Query: 3 GSDPY 7
GSDPY
Sbjct: 16 GSDPY 20


>sp|TRUB_METM7|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain

Query: 3 GSDPY 7
GSDPY
Sbjct: 16 GSDPY 20


>sp|TRUB_METM6|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain

Query: 3 GSDPY 7
GSDPY
Sbjct: 16 GSDPY 20


>sp|Y309_METBU|UPF0280 protein Mbur_0309|Methanococcoides burtonii (strain DSM 6242

Query: 4 SDPYIKM 10
SDPY K+
Sbjct: 42 SDPYFKV 48


>sp|AMPPA_METLZ|AMP phosphorylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 QGSDPYIK 9
QG DP +K
Sbjct: 398 QGGDPKVK 405


>sp|SUMT_METBF|S-ADENOSYL-L-METHIONINE-DEPENDENT uroporphyrinogen III methyltransferase|Methanosarcina barkeri

Query: 2 QGSDPYI 8
+G DPY+
Sbjct: 90 KGGDPYV 96




40|Sequence|196|205|PYIKMTILPD

>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YIKMTILPD 10
Y+K+ +LPD
Sbjct: 1083 YLKIGVLPD 1091


>sp|GPMA_METVS|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PYIKMTILP 9
PY+K ILP
Sbjct: 159 PYLKRYILP 167


>sp|AROA_THEKO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 PYIKMTI 7
PYI+MT+
Sbjct: 179 PYIEMTL 185


>sp|AROA_METLZ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 1 PYIKMTI 7
PY+ MTI
Sbjct: 193 PYVDMTI 199


>sp|Y309_METBU|UPF0280 protein Mbur_0309|Methanococcoides burtonii (strain DSM 6242

Query: 1 PYIKMTILP 9
PY K+T+ P
Sbjct: 44 PYFKVTLEP 52


>sp|Y1980_AERPE|PROTEIN APE_1980.1|Aeropyrum pernix (strain ATCC 700893

Query: 3 IKMTILPD 10
+KM +LPD
Sbjct: 119 VKMAMLPD 126


>sp|LEUC1_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PYIKMTILP 9
P++++ ILP
Sbjct: 325 PWVRLIILP 333


>sp|AROA_METHJ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 1 PYIKMTI 7
PYI MTI
Sbjct: 195 PYIMMTI 201


>sp|AROA_PYRFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PYIKMTI 7
PYI+MT+
Sbjct: 182 PYIEMTL 188


>sp|UVRC_METBU|UVRABC system protein C|Methanococcoides burtonii (strain DSM 6242

Query: 1 PYIKMTI 7
PY+K+T+
Sbjct: 98 PYVKVTV 104


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YIKMTILP 9
Y+K T+LP
Sbjct: 453 YVKETLLP 460


>sp|RL15E_PYRAE|LARGE ribosomal subunit protein eL15|Pyrobaculum aerophilum (strain ATCC

Query: 2 YIKMTILP 9
Y+K T+LP
Sbjct: 175 YLKKTLLP 182




41|Sequence|201|210|TILPDKRHRV

>sp|Y1305_PYRAB|UPF0056 membrane protein PYRAB13050|Pyrococcus abyssi (strain GE5 /

Query: 2 ILPDKRHRV 10
+ PDKRH V
Sbjct: 35 LAPDKRHEV 43


>sp|DTDA_NATPD|D-AMINOACYL-TRNA deacylase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 TILPDKRHRV 10
T+ PD HRV
Sbjct: 425 TVTPDDVHRV 434


>sp|Y952_ARCFU|UNCHARACTERIZED protein AF_0952|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ILPDKRHR 9
+LPDK H+
Sbjct: 7 VLPDKDHQ 14


>sp|PGK_METLZ|PHOSPHOGLYCERATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 TILPDKRHR 9
TIL DKR R
Sbjct: 32 TILDDKRFR 40


>sp|Y1533_SACS2|PUTATIVE dioxygenase SSO1533|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LPDKRHRV 10
LP KRH V
Sbjct: 10 LPKKRHTV 17


>sp|SYP_SULTO|PROLINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TILPDKR 7
TILPD R
Sbjct: 217 TILPDSR 223


>sp|RS4E_METTH|SMALL ribosomal subunit protein eS4|Methanothermobacter

Query: 2 ILPDKRHRV 10
+LPD+R R+
Sbjct: 102 VLPDERGRL 110


>sp|Y2001_METTM|UNCHARACTERIZED protein MTBMA_p00010|Methanothermobacter marburgensis (strain ATCC

Query: 1 TILPDKRH 8
ILP+K H
Sbjct: 264 NILPEKEH 271




42|Sequence|206|215|KRHRVKTRVL

>sp|HMGCS_CALMQ|HYDROXYMETHYLGLUTARYL-COA synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 RHRVKTR 8
R+R+KTR
Sbjct: 14 RYRIKTR 20




43|Sequence|211|220|KTRVLRKTLD

>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 3 RVLRKTLD 10
RVLRKT D
Sbjct: 182 RVLRKTFD 189


>sp|NSR_THEKO|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Thermococcus kodakarensis

Query: 3 RVLRKTLD 10
RVLRKT D
Sbjct: 182 RVLRKTFD 189


>sp|ISF1_METJA|IRON-SULFUR flavoprotein MJ0731|Methanocaldococcus jannaschii (strain ATCC

Query: 3 RVLRKTLD 10
RVLRKTL+
Sbjct: 179 RVLRKTLN 186


>sp|AROE_METS3|SHIKIMATE dehydrogenase (NADP(+))|Methanobrevibacter smithii (strain ATCC

Query: 3 RVLRKTLD 10
+ LRKTLD
Sbjct: 273 KTLRKTLD 280


>sp|GATE_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum aerophilum (strain ATCC

Query: 1 KTRVLRKTLD 10
K+R++RK LD
Sbjct: 290 KSRLVRKVLD 299


>sp|AMPPA_METBU|AMP phosphorylase|Methanococcoides burtonii (strain DSM 6242

Query: 2 TRVLRKTLD 10
T ++RKT+D
Sbjct: 88 TYIIRKTMD 96




44|Sequence|216|225|RKTLDPVFDE

>sp|GLYA_HALLT|SERINE hydroxymethyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 1 RKTLDPVFDE 10
++ LDP FDE
Sbjct: 273 KEALDPSFDE 282


>sp|PCKG_THEVO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma volcanium (strain ATCC 51530

Query: 4 LDPVFDE 10
LDPV+DE
Sbjct: 348 LDPVYDE 354


>sp|QOXM_SULAC|QUINOL oxidase subunit 1/3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KTLDPVFDE 10
K+LD FDE
Sbjct: 509 KSLDGAFDE 517


>sp|CBID_METS3|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 RKTLDPVFDE 10
+KTLD + DE
Sbjct: 41 KKTLDIIIDE 50


>sp|PURA_THEAC|ADENYLOSUCCINATE synthetase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KTLDPVFDE 10
K ++PV+DE
Sbjct: 370 KKIEPVYDE 378


>sp|GLYA_HALSA|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 KTLDPVFDE 10
+ LDP F+E
Sbjct: 274 EALDPAFEE 282


>sp|GLYA_HALS3|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 2 KTLDPVFDE 10
+ LDP F+E
Sbjct: 274 EALDPAFEE 282


>sp|KDGK_THEAC|2-DEHYDRO-3-DEOXYGLUCONOKINASE acidophilum (strain ATCC 25905

Query: 2 KTLDPVFDE 10
KTL VFDE
Sbjct: 16 KTLAIVFDE 24


>sp|IF2A_METST|TRANSLATION initiation factor 2 subunit|Methanosphaera stadtmanae (strain ATCC

Query: 2 KTLDPVFDE 10
KTLD +DE
Sbjct: 116 KTLDEAYDE 124


>sp|IF6_META3|TRANSLATION initiation factor 6|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 RKTLDPVFD 9
RKT + +FD
Sbjct: 126 RKTFEDIFD 134


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 4 LDPVFDE 10
+DPVF+E
Sbjct: 1505 VDPVFEE 1511


>sp|PDAD_HALSA|PYRUVOYL-DEPENDENT arginine decarboxylase|Halobacterium salinarum (strain ATCC 700922

Query: 5 DPVFDE 10
DPVFD+
Sbjct: 155 DPVFDQ 160


>sp|PDAD_HALS3|PYRUVOYL-DEPENDENT arginine decarboxylase|Halobacterium salinarum (strain ATCC 29341

Query: 5 DPVFDE 10
DPVFD+
Sbjct: 155 DPVFDQ 160


>sp|HELS_METTH|ATP-DEPENDENT DNA helicase Hel308|Methanothermobacter thermautotrophicus (strain

Query: 1 RKTLDPVFDE 10
RK+ DPV D+
Sbjct: 537 RKSRDPVRDK 546


>sp|FBPAP_SULTO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 DPVFDE 10
DP FDE
Sbjct: 312 DPAFDE 317


>sp|CBPX2_SACS2|THERMOSTABLE carboxypeptidase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KTLDPVF 8
+T+DP+F
Sbjct: 208 ETIDPIF 214


>sp|CBPX1_SACS2|THERMOSTABLE carboxypeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KTLDPVF 8
+T+DP+F
Sbjct: 208 ETIDPIF 214


>sp|BSUHB_METJA|FRUCTOSE-1,6-BISPHOSPHATASE/INOSITOL-1-MONOPHOSPHATASE jannaschii (strain ATCC 43067

Query: 1 RKTLDPVFD 9
+ TLD VFD
Sbjct: 184 KGTLDAVFD 192


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 TLDPVFDE 10
T+DP+F++
Sbjct: 151 TVDPIFEK 158


>sp|MTIP_METKA|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanopyrus kandleri (strain

Query: 1 RKTLDPVFD 9
R+T+D VF+
Sbjct: 211 RRTIDEVFE 219




45|Sequence|221|230|PVFDETFTFY

>sp|CBIA_METM7|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C7 /

Query: 3 FDETFTFY 10
FDE+F FY
Sbjct: 257 FDESFNFY 264


>sp|CBIA_METM5|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C5 /

Query: 3 FDETFTFY 10
FDE+F FY
Sbjct: 257 FDESFNFY 264


>sp|CBIA_METVS|COBYRINATE a,c-diamide synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 FDETFTFY 10
FDE+F FY
Sbjct: 257 FDESFNFY 264


>sp|CBIA_METST|COBYRINATE a,c-diamide synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 FDETFTFY 10
FDE F FY
Sbjct: 255 FDEAFNFY 262


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VFDETFTFY 10
VFDE TFY
Sbjct: 122 VFDELATFY 130


>sp|CBIA_METS3|COBYRINATE a,c-diamide synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 FDETFTFY 10
+DE F FY
Sbjct: 251 YDEVFNFY 258


>sp|MUTS_NATPD|DNA mismatch repair protein MutS|Natronomonas pharaonis (strain ATCC

Query: 1 PVFDETFT 8
P+FD FT
Sbjct: 657 PIFDRVFT 664


>sp|AMPPA_THESM|AMP phosphorylase|Thermococcus sibiricus (strain DSM 12597

Query: 1 PVFDETFTF 9
P+ D+T+TF
Sbjct: 409 PIGDKTYTF 417


>sp|AMPPA_THEON|AMP phosphorylase|Thermococcus onnurineus (strain NA1)

Query: 1 PVFDETFTF 9
P+ D+T+TF
Sbjct: 409 PIGDKTYTF 417


>sp|AMPPA_THEKO|AMP phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PVFDETFTF 9
P+ D+T+TF
Sbjct: 409 PIGDKTYTF 417


>sp|TRPB1_THEKO|TRYPTOPHAN synthase beta chain 1|Thermococcus kodakarensis (strain ATCC

Query: 1 PVFDETFTFY 10
P F+ET +Y
Sbjct: 36 PEFNETLEYY 45


>sp|AMPPA_THEPD|AMP phosphorylase|Thermofilum pendens (strain DSM 2475

Query: 1 PVFDETFTFY 10
P+ D+T+T Y
Sbjct: 403 PLGDKTYTLY 412


>sp|THSA_METTH|CHAPERONIN subunit alpha|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 VFDETFTF 9
+FDE TF
Sbjct: 348 IFDEVLTF 355


>sp|CBIA_METBF|COBYRINATE a,c-diamide synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 FDETFTFY 10
DE F FY
Sbjct: 275 LDEAFNFY 282


>sp|CBIA_METAC|COBYRINATE a,c-diamide synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 FDETFTFY 10
DE F FY
Sbjct: 278 LDEAFNFY 285


>sp|CBIA_METTH|COBYRINATE a,c-diamide synthase|Methanothermobacter thermautotrophicus (strain

Query: 4 DETFTFY 10
DE F FY
Sbjct: 253 DEAFNFY 259


>sp|PURL_PYRNV|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 FDETFTF 9
FDE FT+
Sbjct: 156 FDEDFTY 162


>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 3 FDETFTF 9
FDE FT+
Sbjct: 156 FDEDFTY 162


>sp|PURL_PYRCJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 FDETFTF 9
FDE FT+
Sbjct: 156 FDEDFTY 162


>sp|PURL_PYRAR|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 FDETFTF 9
FDE FT+
Sbjct: 156 FDEDFTY 162


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VFDETFTF 9
+ DETF F
Sbjct: 1098 ILDETFPF 1105


>sp|ENDA_NANEQ|TRNA-SPLICING endonuclease|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 DETFTFY 10
DETF FY
Sbjct: 113 DETFDFY 119


>sp|SYD_PICTO|ASPARTATE--TRNA(ASP) ligase|Picrophilus torridus (strain ATCC 700027

Query: 5 ETFTFY 10
E+FTFY
Sbjct: 372 ESFTFY 377


>sp|RNABP_PYRAB|RNA-BINDING protein PAB1135|Pyrococcus abyssi (strain GE5 /

Query: 4 DETFTFY 10
DET TFY
Sbjct: 98 DETGTFY 104


>sp|TRUD_ARCFU|PROBABLE tRNA pseudouridine synthase D|Archaeoglobus fulgidus (strain ATCC

Query: 4 DETFTFY 10
D TF+FY
Sbjct: 385 DSTFSFY 391




46|Sequence|226|235|TFTFYGIPYS

>sp|FEN_NITMS|FLAP endonuclease 1|Nitrosopumilus maritimus (strain SCM1)

Query: 2 FTFYGIPY 9
T++GIPY
Sbjct: 139 LTYFGIPY 146


>sp|HIS8_METMJ|HISTIDINOL-PHOSPHATE aminotransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 TFTFYGI 7
TF+FYGI
Sbjct: 114 TFSFYGI 120


>sp|RS24_NANEQ|SMALL ribosomal subunit protein eS24|Nanoarchaeum equitans (strain

Query: 5 YGIPYS 10
YG+PYS
Sbjct: 61 YGLPYS 66


>sp|HIS8_METPE|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 TFTFYGI 7
TF+FYGI
Sbjct: 111 TFSFYGI 117


>sp|HBCL2_METS5|4-HYDROXYBUTYRATE--COA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 3 TFYGIPYS 10
+F+G+PY+
Sbjct: 88 SFFGVPYA 95


>sp|IF6_METAR|TRANSLATION initiation factor 6|Methanocella arvoryzae (strain DSM 22066

Query: 4 FYGIPY 9
FYG PY
Sbjct: 7 FYGYPY 12


>sp|PYRB_METJA|ASPARTATE carbamoyltransferase catalytic subunit|Methanocaldococcus

Query: 3 TFYGIP 8
+FYGIP
Sbjct: 285 SFYGIP 290


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 3 TFYGIPYS 10
+++GIPY+
Sbjct: 214 SYFGIPYA 221


>sp|NIFE_METTM|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 5 YGIPY 9
YGIPY
Sbjct: 285 YGIPY 289


>sp|NIFE_METBA|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanosarcina

Query: 5 YGIPY 9
YGIPY
Sbjct: 273 YGIPY 277


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 5 YGIPY 9
YGIPY
Sbjct: 1017 YGIPY 1021


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain ATCC

Query: 5 YGIPY 9
YGIPY
Sbjct: 1018 YGIPY 1022


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 TFYGIPY 9
T +G+PY
Sbjct: 28 TLFGVPY 34


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FYGIP 8
FYGIP
Sbjct: 399 FYGIP 403


>sp|KAD_METMA|ADENYLATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 FYGIP 8
FYGIP
Sbjct: 23 FYGIP 27


>sp|KAD_METAC|ADENYLATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 FYGIP 8
FYGIP
Sbjct: 23 FYGIP 27


>sp|HTR18_HALS3|TRANSDUCER protein Htr18|Halobacterium salinarum (strain ATCC 29341

Query: 1 TFTFYGIPY 9
T+T Y IP+
Sbjct: 132 TYTSYSIPW 140


>sp|PYRB_METVS|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus vannielii

Query: 3 TFYGIP 8
+FYG+P
Sbjct: 282 SFYGVP 287


>sp|PYRB_METTP|ASPARTATE carbamoyltransferase catalytic subunit|Methanothrix

Query: 3 TFYGIP 8
+FYG+P
Sbjct: 287 SFYGVP 292


>sp|PYRB_METMP|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus maripaludis

Query: 3 TFYGIP 8
+FYG+P
Sbjct: 282 SFYGVP 287


>sp|PYRB_METM7|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus maripaludis

Query: 3 TFYGIP 8
+FYG+P
Sbjct: 282 SFYGVP 287


>sp|PYRB_METM6|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus maripaludis

Query: 3 TFYGIP 8
+FYG+P
Sbjct: 282 SFYGVP 287


>sp|PYRB_METM5|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus maripaludis

Query: 3 TFYGIP 8
+FYG+P
Sbjct: 282 SFYGVP 287


>sp|PYRB_METBU|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcoides burtonii

Query: 3 TFYGIP 8
+FYG+P
Sbjct: 289 SFYGVP 294


>sp|PYRB_META3|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus aeolicus

Query: 3 TFYGIP 8
+FYG+P
Sbjct: 289 SFYGVP 294


>sp|PYRB_ARCFU|ASPARTATE carbamoyltransferase catalytic subunit|Archaeoglobus fulgidus

Query: 3 TFYGIP 8
+FYG+P
Sbjct: 283 SFYGVP 288


>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 4 FYGIPYS 10
++GIPY+
Sbjct: 209 YFGIPYA 215


>sp|TRF2_THEVO|TRICORN protease-interacting factor F2|Thermoplasma volcanium (strain ATCC

Query: 4 FYGIPYS 10
++GIPY+
Sbjct: 215 YFGIPYA 221


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 3 TFYGIPY 9
T +G+PY
Sbjct: 28 TIFGVPY 34


>sp|KDPB_THEVO|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma volcanium (strain ATCC

Query: 3 TFYGIPYS 10
+F+G+PY+
Sbjct: 49 SFFGVPYT 56


>sp|TRF3_THEVO|TRICORN protease-interacting factor F3|Thermoplasma volcanium (strain ATCC

Query: 4 FYGIPYS 10
++GIPY+
Sbjct: 210 YFGIPYA 216


>sp|DAPB_METHJ|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 TFYGIP 8
TF+G+P
Sbjct: 39 TFFGVP 44


>sp|TOP1_AERPE|DNA topoisomerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 5 YGIPY 9
YG+PY
Sbjct: 28 YGVPY 32


>sp|NURA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 1 TFTFYGI 7
+F+FYG+
Sbjct: 84 SFSFYGV 90


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 FYGIPY 9
+YGIP+
Sbjct: 388 YYGIPF 393


>sp|PYRB_METAR|ASPARTATE carbamoyltransferase catalytic subunit|Methanocella arvoryzae

Query: 3 TFYGIP 8
+FYG+P
Sbjct: 289 SFYGVP 294


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 FYGIP 8
FYGIP
Sbjct: 382 FYGIP 386


>sp|Y1393_METJA|UNCHARACTERIZED protein MJ1393|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FTFYGIP 8
FTF GIP
Sbjct: 385 FTFDGIP 391


>sp|NIFD_METTM|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 5 YGIPY 9
YG+PY
Sbjct: 280 YGVPY 284


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TFTFYGIP 8
FTF G+P
Sbjct: 764 NFTFSGVP 771


>sp|NIFD_METMP|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 5 YGIPY 9
YG+PY
Sbjct: 282 YGVPY 286




47|Sequence|231|240|GIPYSQLQDL

>sp|RL10_NATPD|LARGE ribosomal subunit protein uL10|Natronomonas pharaonis (strain

Query: 1 GIPYSQLQDL 10
GIP QLQD+
Sbjct: 39 GIPSRQLQDM 48


>sp|RL10_HALSA|LARGE ribosomal subunit protein uL10|Halobacterium salinarum (strain

Query: 1 GIPYSQLQDL 10
GIP QLQD+
Sbjct: 40 GIPSKQLQDM 49


>sp|RL10_HALS3|LARGE ribosomal subunit protein uL10|Halobacterium salinarum (strain

Query: 1 GIPYSQLQDL 10
GIP QLQD+
Sbjct: 40 GIPSKQLQDM 49


>sp|RL10_HALMA|LARGE ribosomal subunit protein uL10|Haloarcula marismortui (strain

Query: 1 GIPYSQLQDL 10
GIP QLQD+
Sbjct: 40 GIPSRQLQDM 49


>sp|NADE_THEVO|NH(3)-DEPENDENT NAD(+) synthetase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GIPYSQLQDL 10
G+PYS++ D+
Sbjct: 194 GMPYSKIDDI 203


>sp|RPO2C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo2C|Archaeoglobus fulgidus (strain ATCC

Query: 1 GIPYSQL 7
GIPYS L
Sbjct: 162 GIPYSNL 168


>sp|RL10_METKA|LARGE ribosomal subunit protein uL10|Methanopyrus kandleri (strain AV19

Query: 1 GIPYSQLQDL 10
GIP QLQ++
Sbjct: 45 GIPAPQLQEI 54


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GIPYSQLQDL 10
GIP QL++L
Sbjct: 559 GIPKEQLEEL 568


>sp|Y2292_ARCFU|UNCHARACTERIZED protein AF_2292|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GIPYSQLQD 9
G+P S+L+D
Sbjct: 135 GLPLSELRD 143


>sp|RL10_HALVD|LARGE ribosomal subunit protein uL10|Haloferax volcanii (strain ATCC

Query: 1 GIPYSQLQDL 10
GIP QLQ +
Sbjct: 40 GIPSRQLQSM 49


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 1 GIPYSQLQ 8
GIPYS+ +
Sbjct: 667 GIPYSRYE 674


>sp|RL10_METBU|LARGE ribosomal subunit protein uL10|Methanococcoides burtonii (strain

Query: 1 GIPYSQLQDL 10
GIP QLQ +
Sbjct: 38 GIPAKQLQSM 47


>sp|HUTG_HALSA|FORMIMIDOYLGLUTAMASE salinarum (strain ATCC 700922

Query: 1 GIPYSQLQD 9
G PY QL D
Sbjct: 163 GTPYRQLFD 171


>sp|HUTG_HALS3|FORMIMIDOYLGLUTAMASE salinarum (strain ATCC 29341

Query: 1 GIPYSQLQD 9
G PY QL D
Sbjct: 163 GTPYRQLFD 171


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GIPYSQLQDL 10
GIP QL+++
Sbjct: 560 GIPKEQLEEI 569


>sp|ARLY_METST|ARGININOSUCCINATE lyase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GIPYSQLQDL 10
GIP+S +DL
Sbjct: 310 GIPHSYNRDL 319


>sp|Y1731_ARCFU|UNCHARACTERIZED protein AF_1731|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GIPYSQLQDL 10
G+P S+++DL
Sbjct: 40 GLPESKVRDL 49


>sp|AATC_METST|A-TYPE ATP synthase subunit C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 IPYSQLQD 9
+PY +L+D
Sbjct: 160 VPYGELKD 167




48|Sequence|236|245|QLQDLVLHFL

>sp|EF2_METMA|ELONGATION factor 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 DLVLHFL 10
D+V+HFL
Sbjct: 250 DMVIHFL 256


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 4 DLVLHFL 10
D+V+HFL
Sbjct: 250 DMVIHFL 256


>sp|EF2_METAC|ELONGATION factor 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 DLVLHFL 10
D+V+HFL
Sbjct: 250 DMVIHFL 256


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QLQDLVLH 8
QLQD+V++
Sbjct: 890 QLQDIVIY 897


>sp|AATI_SACS2|A-TYPE ATP synthase subunit I|Saccharolobus solfataricus (strain ATCC

Query: 2 LQDLVLHF 9
+QDL LHF
Sbjct: 669 IQDLRLHF 676




49|Sequence|241|250|VLHFLVLSFD

>sp|SFSA_THEAC|SUGAR fermentation stimulation protein homolog|Thermoplasma acidophilum

Query: 3 HFLVLSFD 10
HFL FD
Sbjct: 191 HFLTFGFD 198




50|Sequence|246|255|VLSFDRFSRD

>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LSFDRFSR 9
+SFD +SR
Sbjct: 89 ISFDNYSR 96


>sp|SYM_AERPE|METHIONINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LSFDRFSR 9
+SFD +SR
Sbjct: 87 ISFDNYSR 94




51|Sequence|251|260|RFSRDDVIGE

>sp|OTC_ARCFU|ORNITHINE carbamoyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RFSRDDVI 8
+FS+DDV+
Sbjct: 249 KFSKDDVV 256


>sp|CDC45_SACS2|CELL division control protein 45|Saccharolobus solfataricus (strain ATCC

Query: 1 RFSRDDVI 8
+F+RDD+I
Sbjct: 220 KFTRDDII 227


>sp|MOAA_METKA|PROBABLE GTP 3',8-cyclase|Methanopyrus kandleri (strain AV19 /

Query: 1 RFSRDDVI 8
RFS DDVI
Sbjct: 128 RFSPDDVI 135


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 4 RDDVIGE 10
RDD+IGE
Sbjct: 921 RDDLIGE 927


>sp|MEND_HALSA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 FSRDDVIGE 10
F+R D +GE
Sbjct: 534 FARTDTVGE 542


>sp|MEND_HALS3|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 FSRDDVIGE 10
F+R D +GE
Sbjct: 534 FARTDTVGE 542


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 4 RDDVIGE 10
RDD++GE
Sbjct: 903 RDDIVGE 909


>sp|CCA_METTH|CCA-ADDING enzyme|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 DDVIGE 10
DDVIGE
Sbjct: 428 DDVIGE 433


>sp|ADHS_METJA|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FSRDDVIG 9
F DDV+G
Sbjct: 241 FQHDDVVG 248


>sp|TRM56_METKA|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanopyrus kandleri (strain

Query: 5 DDVIGE 10
DDVIGE
Sbjct: 96 DDVIGE 101




52|Sequence|256|265|DVIGEVMVPL

>sp|CDC6H_HALMA|ORC1-TYPE DNA replication protein 8|Haloarcula marismortui (strain ATCC 43049

Query: 1 DVIGEVMVPL 10
DV+GE +VPL
Sbjct: 238 DVLGEDVVPL 247


>sp|MTAP_CENSY|S-METHYL-5'-THIOADENOSINE phosphorylase|Cenarchaeum symbiosum (strain A)

Query: 1 DVIGEVMVP 9
D+IG MVP
Sbjct: 159 DIIGMTMVP 167


>sp|ARLMC_PYRAB|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus abyssi

Query: 2 VIGEVMVPL 10
V+GEV+VP
Sbjct: 15 VLGEVLVPF 23


>sp|CDC61_METMA|ORC1-TYPE DNA replication protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VIGEVMVPL 10
V+GE+++PL
Sbjct: 234 VLGEMVIPL 242


>sp|CDC61_METAC|ORC1-TYPE DNA replication protein 1|Methanosarcina acetivorans (strain ATCC

Query: 2 VIGEVMVPL 10
V+GE+++PL
Sbjct: 234 VLGEMVIPL 242


>sp|Y1902_METTH|UPF0173 metal-dependent hydrolase MTH_1902|Methanothermobacter

Query: 1 DVIGEVMVP 9
DVIGE+ P
Sbjct: 150 DVIGEIYRP 158


>sp|MTAP_SACS2|S-METHYL-5'-THIOADENOSINE phosphorylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DVIGEVMVP 9
D+IG +VP
Sbjct: 186 DIIGMTLVP 194


>sp|MTAP_NITMS|S-METHYL-5'-THIOADENOSINE phosphorylase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 DVIGEVMVP 9
D+IG +VP
Sbjct: 182 DIIGMTLVP 190


>sp|HMDH_SACS2|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DVIGEVMVPL 10
+VIG + +PL
Sbjct: 65 NVIGAIQIPL 74


>sp|PFDA_METVS|PREFOLDIN subunit alpha|Methanococcus vannielii (strain ATCC 35089

Query: 4 GEVMVPL 10
GE+M+PL
Sbjct: 50 GEIMLPL 56


>sp|HEM3_METAR|PROBABLE porphobilinogen deaminase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DVIGEVM 7
DVIGEV+
Sbjct: 249 DVIGEVL 255


>sp|MTAP_THEPD|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermofilum pendens (strain DSM 2475

Query: 1 DVIGEVMVP 9
D+IG +VP
Sbjct: 181 DIIGMTLVP 189




53|Sequence|261|270|VMVPLAGVDP

>sp|TAW22_NANEQ|TRNA (guanine(37)-N(1))/4-demethylwyosine(37)-methyltransferase

Query: 1 VMVPLAGVDP 10
+++P AGV+P
Sbjct: 102 ILIPFAGVNP 111


>sp|CPS_METS3|CARBAMOYL-PHOSPHATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 MVPLAGVDP 10
+VPL G+DP
Sbjct: 65 VVPLIGIDP 73


>sp|TAW22_PYRAB|TRNA (guanine(37)-N(1))/4-demethylwyosine(37)-methyltransferase

Query: 1 VMVPLAGVDP 10
++VP AGV P
Sbjct: 187 ILVPFAGVIP 196


>sp|SYE_METHJ|GLUTAMATE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VMVPLAGVDP 10
V+VP++G DP
Sbjct: 416 VLVPVSGSDP 425


>sp|RL32_HALSA|LARGE ribosomal subunit protein eL32|Halobacterium salinarum (strain ATCC

Query: 5 LAGVDP 10
LAGVDP
Sbjct: 190 LAGVDP 195


>sp|FILR1_METH6|METHANOGENESIS regulatory protein FilR1|Methanothrix harundinacea (strain 6Ac)

Query: 4 PLAGVDP 10
PLAG DP
Sbjct: 287 PLAGEDP 293


>sp|LIVG_ARCFU|PROBABLE branched-chain amino acid transport|Archaeoglobus fulgidus (strain

Query: 4 PLAGVDP 10
P+AGV+P
Sbjct: 175 PIAGVNP 181


>sp|CAS1A_ARCFU|CRISPR-ASSOCIATED endonuclease Cas1 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VPLAGVDP 10
V LAG+DP
Sbjct: 226 VELAGLDP 233


>sp|RS10_HALSA|SMALL ribosomal subunit protein uS10|Halobacterium salinarum (strain

Query: 3 VPLAGVDP 10
V LAGVDP
Sbjct: 6 VRLAGVDP 13


>sp|RS10_HALS3|SMALL ribosomal subunit protein uS10|Halobacterium salinarum (strain

Query: 3 VPLAGVDP 10
V LAGVDP
Sbjct: 6 VRLAGVDP 13


>sp|CSG_HALSA|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 700922

Query: 1 VMVPLAGVDP 10
V VPL+ V+P
Sbjct: 740 VDVPLSNVEP 749


>sp|CSG_HALS3|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 29341

Query: 1 VMVPLAGVDP 10
V VPL+ V+P
Sbjct: 740 VDVPLSNVEP 749


>sp|PUR5_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PLAGVD 9
PLAGVD
Sbjct: 90 PLAGVD 95


>sp|THII_AERPE|PROBABLE tRNA sulfurtransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VMVPLAGVD 9
V+ PLAG+D
Sbjct: 313 VLRPLAGMD 321


>sp|DAPB_METS3|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 PLAGVD 9
PLAGVD
Sbjct: 39 PLAGVD 44


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 1 VMVPLAGVD 9
+ +P+AGVD
Sbjct: 64 IRMPVAGVD 72


>sp|RNH2_NATPD|RIBONUCLEASE HII|Natronomonas pharaonis (strain ATCC 35678

Query: 2 MVPLAGVD 9
M PL GVD
Sbjct: 1 MTPLVGVD 8


>sp|MOAC_PYRFU|PROBABLE cyclic pyranopterin monophosphate synthase|Pyrococcus furiosus

Query: 3 VPLAGVD 9
+PL GVD
Sbjct: 77 IPLTGVD 83


>sp|MOAC_PYRAB|PROBABLE cyclic pyranopterin monophosphate synthase|Pyrococcus abyssi

Query: 3 VPLAGVD 9
+PL GVD
Sbjct: 79 IPLTGVD 85


>sp|MOAC_THEON|PROBABLE cyclic pyranopterin monophosphate synthase|Thermococcus

Query: 3 VPLAGVD 9
+PL GVD
Sbjct: 78 IPLTGVD 84




54|Sequence|266|275|AGVDPSTGKV

>sp|PMDHS_METTH|PHOSPHOMEVALONATE dehydratase small subunit|Methanothermobacter thermautotrophicus

Query: 2 GVDPSTGKV 10
GVDP TG+V
Sbjct: 29 GVDPGTGRV 37


>sp|PMDHS_METKA|PHOSPHOMEVALONATE dehydratase small subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 GVDPSTGKV 10
GVDP TG+V
Sbjct: 34 GVDPKTGEV 42


>sp|THSB_ARCFU|THERMOSOME subunit beta|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AGVDPSTGKV 10
AGVD TGKV
Sbjct: 477 AGVDVDTGKV 486


>sp|EF1A_STAMF|ELONGATION factor 1-alpha|Staphylothermus marinus (strain ATCC 43588

Query: 1 AGVDPSTGKV 10
A +DP TGKV
Sbjct: 364 AKLDPRTGKV 373


>sp|NNR_PYRAE|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Pyrobaculum aerophilum (strain

Query: 1 AGVDPSTGKV 10
+G+DP TG+V
Sbjct: 163 SGLDPDTGEV 172


>sp|EF1A_IGNH4|ELONGATION factor 1-alpha|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 VDPSTGKV 10
+DP TGKV
Sbjct: 369 IDPRTGKV 376


>sp|RL31_HYPBU|LARGE ribosomal subunit protein eL31|Hyperthermus butylicus (strain DSM

Query: 4 DPSTGKV 10
DP TGKV
Sbjct: 77 DPETGKV 83


>sp|PMDHS_METAR|PHOSPHOMEVALONATE dehydratase small subunit|Methanocella arvoryzae (strain DSM

Query: 2 GVDPSTGKV 10
GVDP TG V
Sbjct: 29 GVDPGTGTV 37


>sp|PGK_METBR|PHOSPHOGLYCERATE kinase|Methanobacterium bryantii

Query: 3 VDPSTGKV 10
VDPSTG +
Sbjct: 28 VDPSTGSI 35


>sp|PMDHS_THEON|PHOSPHOMEVALONATE dehydratase small subunit|Thermococcus onnurineus (strain NA1)

Query: 2 GVDPSTGKV 10
GVDP+TG V
Sbjct: 29 GVDPNTGIV 37


>sp|PMDHS_PYRHO|PHOSPHOMEVALONATE dehydratase small subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 GVDPSTGKV 10
GVDP TG +
Sbjct: 29 GVDPETGTI 37


>sp|PMDHS_THESM|PHOSPHOMEVALONATE dehydratase small subunit|Thermococcus sibiricus (strain DSM

Query: 2 GVDPSTG 8
GVDP+TG
Sbjct: 29 GVDPNTG 35


>sp|KAE1B_THEAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 VDPSTGKV 10
+DPS GKV
Sbjct: 462 IDPSMGKV 469


>sp|Y1038_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 GVDPSTGKV 10
G+DPS+ KV
Sbjct: 68 GLDPSSKKV 76


>sp|EF1A_METS3|ELONGATION factor 1-alpha|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 AGVDPSTGKV 10
A +DP+TG+V
Sbjct: 345 AKLDPATGQV 354


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GVDPSTGK 9
G+DP TGK
Sbjct: 561 GLDPFTGK 568


>sp|PMDHS_THEGJ|PHOSPHOMEVALONATE dehydratase small subunit|Thermococcus gammatolerans (strain DSM

Query: 2 GVDPSTGKV 10
GVDP TG V
Sbjct: 29 GVDPETGIV 37


>sp|METXA_METZD|HOMOSERINE O-acetyltransferase|Methanosalsum zhilinae (strain DSM 4017

Query: 1 AGVDPSTGK 9
+ +DP TGK
Sbjct: 107 SSIDPETGK 115


>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 VDPSTGK 9
VDP TGK
Sbjct: 119 VDPYTGK 125


>sp|PMDHS_THEKO|PHOSPHOMEVALONATE dehydratase small subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 GVDPSTGKV 10
GVDP TG V
Sbjct: 29 GVDPETGIV 37


>sp|PMDHS_PYRFU|PHOSPHOMEVALONATE dehydratase small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GVDPSTG 8
GVDP+TG
Sbjct: 29 GVDPNTG 35


>sp|NFI_PYRAE|ENDONUCLEASE V|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 VDPSTGKV 10
VDP+TG+V
Sbjct: 143 VDPATGEV 150


>sp|RS8E_METTH|SMALL ribosomal subunit protein eS8|Methanothermobacter

Query: 3 VDPSTGKV 10
VDP TGKV
Sbjct: 65 VDPETGKV 72


>sp|PGK_METFV|PHOSPHOGLYCERATE kinase|Methanothermus fervidus (strain ATCC 43054

Query: 3 VDPSTGKV 10
VDP TG++
Sbjct: 27 VDPHTGRI 34


>sp|Y3507_METJA|UNCHARACTERIZED protein MJECL07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GVDPSTGKV 10
GVD S GKV
Sbjct: 52 GVDGSRGKV 60


>sp|Y4618_METAC|UPF0313 protein MA_4618|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GVDPSTGK 9
G+DP TGK
Sbjct: 679 GLDPFTGK 686


>sp|EF1A_AERPE|ELONGATION factor 1-alpha|Aeropyrum pernix (strain ATCC 700893

Query: 1 AGVDPSTGKV 10
A +DP TG+V
Sbjct: 363 AKLDPKTGQV 372


>sp|EF1A_HYPBU|ELONGATION factor 1-alpha|Hyperthermus butylicus (strain DSM 5456

Query: 1 AGVDPSTGKV 10
A +DP TG+V
Sbjct: 365 AKLDPRTGQV 374


>sp|DNLI_ARCFU|DNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AGVDPSTGKV 10
A +DP TGK+
Sbjct: 449 ACLDPVTGKL 458


>sp|PMDHS_PYRAB|PHOSPHOMEVALONATE dehydratase small subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 GVDPSTG 8
GVDP TG
Sbjct: 29 GVDPETG 35


>sp|EF1A_PYRHO|ELONGATION factor 1-alpha|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AGVDPSTGKV 10
A VDP TG +
Sbjct: 360 AKVDPRTGNI 369


>sp|AATA_STAMF|A-TYPE ATP synthase subunit A|Staphylothermus marinus (strain ATCC 43588

Query: 3 VDPSTGK 9
VDP TGK
Sbjct: 276 VDPRTGK 282


>sp|BTUDA_HALSA|COBALAMIN import ATP-binding protein BtuD|Halobacterium salinarum (strain

Query: 2 GVDPSTGKV 10
G DP+TG V
Sbjct: 241 GTDPATGAV 249


>sp|BTUDA_HALS3|COBALAMIN import ATP-binding protein BtuD|Halobacterium salinarum (strain

Query: 2 GVDPSTGKV 10
G DP+TG V
Sbjct: 241 GTDPATGAV 249


>sp|RS13_METAC|SMALL ribosomal subunit protein uS13|Methanosarcina acetivorans (strain

Query: 1 AGVDPS 6
AGVDPS
Sbjct: 59 AGVDPS 64


>sp|EF1A_METKA|ELONGATION factor 1-alpha|Methanopyrus kandleri (strain AV19 /

Query: 3 VDPSTGKV 10
+DP+TG+V
Sbjct: 357 IDPATGEV 364


>sp|EF1A_METS5|ELONGATION factor 1-alpha|Metallosphaera sedula (strain ATCC 51363

Query: 1 AGVDPSTGK 9
A +DP TGK
Sbjct: 363 ARLDPKTGK 371


>sp|SDO1_AERPE|RIBOSOME maturation protein SDO1 homolog|Aeropyrum pernix (strain ATCC

Query: 2 GVDPSTGK 9
+DP+TG+
Sbjct: 111 AIDPTTGR 118


>sp|NNRE_CENSY|NAD(P)H-HYDRATE epimerase|Cenarchaeum symbiosum (strain A)

Query: 1 AGVDPSTGK 9
+G+DP TG+
Sbjct: 158 SGLDPQTGE 166


>sp|EF1A_HALMA|ELONGATION factor 1-alpha|Haloarcula marismortui (strain ATCC 43049

Query: 3 VDPSTGKV 10
+DPS+G+V
Sbjct: 356 IDPSSGEV 363


>sp|EF1A_NATPD|ELONGATION factor 1-alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 3 VDPSTGKV 10
+DPS+G+V
Sbjct: 357 IDPSSGEV 364


>sp|EF1A_DESMO|ELONGATION factor 1-alpha|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 1 AGVDPSTGK 9
A +DP TGK
Sbjct: 365 AKIDPRTGK 373


>sp|METXA_METAC|HOMOSERINE O-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 AGVDPSTGK 9
+ +DP TGK
Sbjct: 126 SSIDPETGK 134


>sp|PGK_METJA|PHOSPHOGLYCERATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VDPSTGKV 10
+DP+TG++
Sbjct: 27 IDPNTGEI 34


>sp|GCSH_HALSA|PROBABLE glycine cleavage system H|Halobacterium salinarum (strain ATCC

Query: 3 VDPSTGKV 10
+DP+TG+V
Sbjct: 18 IDPATGRV 25


>sp|GCSH_HALS3|PROBABLE glycine cleavage system H|Halobacterium salinarum (strain ATCC

Query: 3 VDPSTGKV 10
+DP+TG+V
Sbjct: 18 IDPATGRV 25


>sp|GATB_METKA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 4 DPSTGKV 10
+PSTG+V
Sbjct: 124 EPSTGRV 130


>sp|RL32_HALSA|LARGE ribosomal subunit protein eL32|Halobacterium salinarum (strain ATCC

Query: 1 AGVDPST 7
AGVDP T
Sbjct: 191 AGVDPDT 197


>sp|RPO1C_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Sulfurisphaera tokodaii (strain DSM

Query: 2 GVDPSTGK 9
GVDPS+ K
Sbjct: 175 GVDPSSVK 182


>sp|EF1A_PYRAB|ELONGATION factor 1-alpha|Pyrococcus abyssi (strain GE5 /

Query: 1 AGVDPSTGKV 10
A +DP TG +
Sbjct: 360 AKIDPRTGNI 369


>sp|EF1A_ARCFU|ELONGATION factor 1-alpha|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VDPSTGKV 10
+DP TG+V
Sbjct: 357 IDPRTGQV 364


>sp|NNRE_NITMS|NAD(P)H-HYDRATE epimerase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 AGVDPSTGK 9
+G+DP TG+
Sbjct: 160 SGLDPQTGE 168


>sp|EF1A_SULTO|ELONGATION factor 1-alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 AGVDPSTGK 9
+ +DP TGK
Sbjct: 363 SKIDPKTGK 371


>sp|SECY_SACS2|PROTEIN translocase subunit SecY|Saccharolobus solfataricus (strain ATCC

Query: 1 AGVDPST 7
AG+DP+T
Sbjct: 371 AGLDPAT 377


>sp|PHNC1_NATPD|PHOSPHONATES import ATP-binding protein PhnC|Natronomonas pharaonis (strain ATCC

Query: 1 AGVDPSTGK 9
A +DP TG+
Sbjct: 163 ASLDPETGR 171


>sp|SECF_THEGJ|PROTEIN-EXPORT membrane protein SecF|Thermococcus gammatolerans (strain DSM 15229

Query: 3 VDPSTGKV 10
VDP+ GK+
Sbjct: 141 VDPTFGKI 148


>sp|METXA_METBU|HOMOSERINE O-acetyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 AGVDPSTGK 9
A +DP TG+
Sbjct: 108 ASLDPDTGR 116


>sp|EF1A_SULAC|ELONGATION factor 1-alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 VDPSTGK 9
+DP TGK
Sbjct: 365 IDPKTGK 371


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 AGVDPST 7
AG++PST
Sbjct: 338 AGINPST 344


>sp|MTRB_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanothermobacter

Query: 3 VDPSTGKV 10
+DPSTG +
Sbjct: 17 LDPSTGMI 24


>sp|EF1A_THEON|ELONGATION factor 1-alpha|Thermococcus onnurineus (strain NA1)

Query: 1 AGVDPSTGKV 10
A +DP TG V
Sbjct: 360 AKLDPRTGNV 369


>sp|ALBA_NANEQ|DNA/RNA-BINDING protein Alba|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 VDPSTGK 9
VDP+TG+
Sbjct: 70 VDPATGQ 76


>sp|EF1A_THESM|ELONGATION factor 1-alpha|Thermococcus sibiricus (strain DSM 12597

Query: 1 AGVDPSTGKV 10
A +DP TG V
Sbjct: 360 AKLDPRTGNV 369


>sp|SECY_PYRHO|PROTEIN translocase subunit SecY|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VDPSTGK 9
+DP TGK
Sbjct: 203 IDPLTGK 209


>sp|SECY_PYRAB|PROTEIN translocase subunit SecY|Pyrococcus abyssi (strain GE5 /

Query: 3 VDPSTGK 9
+DP TGK
Sbjct: 203 IDPLTGK 209


>sp|FOLD_PYRCJ|BIFUNCTIONAL protein FolD|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 DPSTGK 9
DP+TGK
Sbjct: 247 DPATGK 252


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 3 VDPSTGKV 10
VDP TG++
Sbjct: 315 VDPETGEM 322


>sp|MTRB_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanothermobacter marburgensis

Query: 3 VDPSTGKV 10
+DPSTG +
Sbjct: 17 LDPSTGMI 24


>sp|EF1A_METTP|ELONGATION factor 1-alpha|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 AGVDPSTGKV 10
A +DP TG V
Sbjct: 357 AKLDPRTGSV 366


>sp|COPP_THEVO|BIFUNCTIONAL phosphopantetheine adenylyltransferase/NTP phosphatase|Thermoplasma

Query: 2 GVDPSTGKV 10
G+D STG V
Sbjct: 282 GIDDSTGIV 290


>sp|THS1_HALVD|CHAPERONIN subunit CTT1|Haloferax volcanii (strain ATCC 29605

Query: 1 AGVDPSTGKV 10
AG+D TG+V
Sbjct: 475 AGLDAYTGEV 484


>sp|BAT_HALSA|BACTERIOOPSIN transcriptional activator|Halobacterium salinarum (strain ATCC

Query: 1 AGVDPSTG 8
AG DP TG
Sbjct: 23 AGSDPETG 30


>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GVDPSTGKV 10
VDP TG++
Sbjct: 304 AVDPDTGEM 312


>sp|RS6E_METHJ|SMALL ribosomal subunit protein eS6|Methanospirillum hungatei JF-1

Query: 4 DPSTGK 9
DP+TGK
Sbjct: 10 DPATGK 15




55|Sequence|271|280|STGKVQLTRD

>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 1 STGKVQLTRD 10
STG +++ RD
Sbjct: 734 STGDIEMARD 743


>sp|RTCB_METMP|TRNA-SPLICING ligase RtcB|Methanococcus maripaludis (strain DSM 14266

Query: 1 STGKVQLTRD 10
S GK+++T+D
Sbjct: 133 SKGKIRITKD 142


>sp|SYC_SULTO|CYSTEINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GKVQLTRD 10
GK+Q +RD
Sbjct: 380 GKIQYSRD 387


>sp|NASD_HALMT|ASSIMILATORY ferredoxin-dependent nitrite reductase|Haloferax mediterranei

Query: 2 TGKVQLTR 9
+GK++LTR
Sbjct: 364 SGKIRLTR 371




56|Sequence|276|285|QLTRDIIKRN

>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 QLTRDIIK 8
+LTRDII+
Sbjct: 841 ELTRDIIE 848


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LTRDIIKRN 10
LTRD+I N
Sbjct: 417 LTRDLIASN 425


>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 TRDIIKRN 10
T+D IKRN
Sbjct: 304 TKDWIKRN 311


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LTRDIIKRN 10
L R+II+RN
Sbjct: 686 LAREIIERN 694


>sp|COOS_METJA|CARBON monoxide dehydrogenase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LTRDIIKRN 10
LT+++IKR+
Sbjct: 459 LTKELIKRD 467


>sp|SYFA_METJA|PHENYLALANINE--TRNA ligase alpha subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 QLTRDII 7
QLTRDII
Sbjct: 194 QLTRDII 200


>sp|AATB_PICTO|A-TYPE ATP synthase subunit B|Picrophilus torridus (strain ATCC 700027

Query: 2 LTRDIIKRN 10
L+RD+ KRN
Sbjct: 330 LSRDLNKRN 338


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 1 QLTRDIIKRN 10
+LT+ +IK+N
Sbjct: 61 RLTKPLIKKN 70


>sp|Y674_METJA|UNCHARACTERIZED protein MJ0674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 DIIKRN 10
DIIKRN
Sbjct: 249 DIIKRN 254


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LTRDIIKR 9
L RDII+R
Sbjct: 968 LVRDIIRR 975


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 LTRDIIKR 9
L RDII+R
Sbjct: 968 LVRDIIRR 975


>sp|Y3521_METJA|UNCHARACTERIZED protein MJECL21|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LTRDIIKR 9
L RDIIK+
Sbjct: 21 LARDIIKK 28


>sp|METK_METMA|S-ADENOSYLMETHIONINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QLTRDIIKR 9
Q+ RDI+K+
Sbjct: 320 QMARDIVKQ 328


>sp|METK_METBF|S-ADENOSYLMETHIONINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QLTRDIIKR 9
Q+ RDI+K+
Sbjct: 320 QMARDIVKQ 328


>sp|METK_METAC|S-ADENOSYLMETHIONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QLTRDIIKR 9
Q+ RDI+K+
Sbjct: 320 QMARDIVKQ 328


>sp|SYR_METM6|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 LTRDIIKR 9
+ RD+IKR
Sbjct: 267 MVRDVIKR 274


>sp|SYR_METM5|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 LTRDIIKR 9
+ RD+IKR
Sbjct: 267 MVRDVIKR 274




57|Sequence|281|290|IIKRNIQKCI

>sp|GLMM_METAR|PROBABLE phosphoglucosamine mutase|Methanocella arvoryzae (strain DSM 22066

Query: 1 IIKRNIQKC 9
+I RN++KC
Sbjct: 150 VILRNVEKC 158


>sp|ASSTI_METJA|L-ASPARTATE semialdehyde sulfurtransferase iron-sulfur

Query: 1 IIKRNIQKCI 10
+IKR+++KC+
Sbjct: 74 VIKRDLEKCV 83


>sp|SYY_METBU|TYROSINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 IIKRNIQKCI 10
+IKRN+Q+ +
Sbjct: 6 LIKRNVQEIV 15


>sp|SYY_METMA|TYROSINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IIKRNIQKCI 10
+IKRN+Q+ +
Sbjct: 6 LIKRNVQEIV 15


>sp|SYY_METBF|TYROSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IIKRNIQKCI 10
+IKRN+Q+ +
Sbjct: 6 LIKRNVQEIV 15


>sp|AGLE_HALVD|GLYCOSYLTRANSFERASE AglE|Haloferax volcanii (strain ATCC 29605

Query: 5 NIQKCI 10
NIQKC+
Sbjct: 20 NIQKCL 25


>sp|DTDA_METB6|D-AMINOACYL-TRNA deacylase|Methanoregula boonei (strain DSM 21154

Query: 2 IKRNIQKCI 10
I+R+I++C+
Sbjct: 17 IRRHIEQCL 25


>sp|HIS4_METBU|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcoides burtonii

Query: 1 IIKRNIQKC 9
IIK+ ++KC
Sbjct: 67 IIKKIVEKC 75


>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IKRNIQKCI 10
IKRN++K +
Sbjct: 308 IKRNVEKGV 316


>sp|Y138_META3|PROTEIN Maeo_0138|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 KRNIQKCI 10
KRN++ CI
Sbjct: 53 KRNLRGCI 60


>sp|SYY_METAC|TYROSINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IIKRNIQKCI 10
+I+RN+Q+ +
Sbjct: 6 LIRRNVQEIV 15


>sp|ARNR_SULAC|HTH-TYPE transcriptional activator ArnR|Sulfolobus acidocaldarius (strain

Query: 3 KRNIQKCI 10
K+NI KC+
Sbjct: 175 KKNIYKCV 182




58|Sequence|286|295|IQKCISRGEL

>sp|BRIX_METMA|PROBABLE Brix domain-containing ribosomal biogenesis|Methanosarcina mazei

Query: 3 KCISRGEL 10
+CISRG++
Sbjct: 27 RCISRGKM 34


>sp|KAD6_PYRAE|PUTATIVE adenylate kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 KCISRGEL 10
KCIS GEL
Sbjct: 33 KCISVGEL 40


>sp|KTHY_METBU|PROBABLE thymidylate kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 IQKCISRGE 9
+Q+C RGE
Sbjct: 139 VQRCGKRGE 147


>sp|BRIX_METAC|PROBABLE Brix domain-containing ribosomal biogenesis|Methanosarcina

Query: 3 KCISRGEL 10
+CI+RG++
Sbjct: 27 RCITRGKM 34


>sp|ECFA2_METHJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanospirillum hungatei

Query: 1 IQKCISRGE 9
I CI RGE
Sbjct: 24 ISLCIQRGE 32


>sp|Y065_METJA|UNCHARACTERIZED protein MJ0065|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IQKCISRG 8
I+KCIS G
Sbjct: 142 IEKCISNG 149


>sp|CYAS_METB6|CYSTEATE synthase|Methanoregula boonei (strain DSM 21154

Query: 3 KCISRGEL 10
+CIS GE+
Sbjct: 8 RCISGGEI 15




59|Sequence|291|300|SRGELQVSLS

>sp|CAS8A_METJA|CRISPR-ASSOCIATED protein Cas8a2/Csa4|Methanocaldococcus jannaschii (strain ATCC

Query: 2 RGELQVSLS 10
RG+L+VSL+
Sbjct: 326 RGDLEVSLT 334




60|Sequence|296|305|QVSLSYQPVA

>sp|CAPPA_METS5|PHOSPHOENOLPYRUVATE carboxylase|Metallosphaera sedula (strain ATCC 51363

Query: 3 SLSYQPV 9
+LSYQPV
Sbjct: 330 TLSYQPV 336


>sp|Y663_METTH|PUTATIVE ammonium transporter MTH_663|Methanothermobacter thermautotrophicus

Query: 2 VSLSYQPVA 10
VSL Y PVA
Sbjct: 145 VSLVYVPVA 153




61|Sequence|301|310|YQPVAQRMTV

***** No hits found ******


62|Sequence|306|315|QRMTVVVLKA

***** No hits found ******


63|Sequence|311|320|VVLKARHLPK

>sp|GLNA_PYRAB|GLUTAMINE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 3 LKARHLPK 10
L+A+HLPK
Sbjct: 416 LEAKHLPK 423


>sp|RPO5_METTP|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanothrix thermoacetophila (strain

Query: 3 LKARHLPK 10
++ARHLPK
Sbjct: 32 VEARHLPK 39


>sp|TRUB_PYRAE|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum aerophilum (strain ATCC

Query: 5 ARHLPK 10
ARHLPK
Sbjct: 235 ARHLPK 240


>sp|TRUB_PYRNV|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum neutrophilum (strain DSM

Query: 5 ARHLPK 10
ARHLPK
Sbjct: 235 ARHLPK 240


>sp|TRUB_PYRIL|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum islandicum (strain DSM

Query: 5 ARHLPK 10
ARHLPK
Sbjct: 235 ARHLPK 240


>sp|TRUB_PYRAR|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum arsenaticum (strain DSM

Query: 5 ARHLPK 10
ARHLPK
Sbjct: 235 ARHLPK 240


>sp|GGGPS_PYRIL|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 VLKARHLPK 10
VL A+H PK
Sbjct: 108 VLLAKHYPK 116




64|Sequence|316|325|RHLPKMDITG

>sp|FRHG_METBF|COENZYME F420 hydrogenase subunit gamma|Methanosarcina barkeri (strain

Query: 1 RHLPKMDI 8
RH+P+MD+
Sbjct: 49 RHIPEMDV 56


>sp|RPO5_METTP|DNA-DIRECTED RNA polymerase subunit Rpo5|Methanothrix thermoacetophila (strain

Query: 1 RHLPKMDIT 9
RHLPK+ +T
Sbjct: 35 RHLPKIHVT 43


>sp|UVRB_METMA|UVRABC system protein B|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RHLPKMDI 8
+H+PK DI
Sbjct: 623 KHIPKTDI 630


>sp|UVRB_METAC|UVRABC system protein B|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RHLPKMDI 8
+H+PK DI
Sbjct: 623 KHIPKTDI 630


>sp|ARGC_METLZ|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 RHLPKM 6
RHLP+M
Sbjct: 199 RHLPEM 204


>sp|GATA_METHJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanospirillum hungatei JF-1 (strain

Query: 1 RHLPKMDITG 10
+H P DITG
Sbjct: 204 KHNPVSDITG 213


>sp|TRUB_PYRNV|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum neutrophilum (strain DSM

Query: 1 RHLPKM 6
RHLPK+
Sbjct: 236 RHLPKI 241


>sp|TRUB_PYRIL|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum islandicum (strain DSM

Query: 1 RHLPKM 6
RHLPK+
Sbjct: 236 RHLPKI 241


>sp|TRUB_PYRAE|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum aerophilum (strain ATCC

Query: 1 RHLPKM 6
RHLPK+
Sbjct: 236 RHLPKI 241


>sp|TRUB_PYRAR|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum arsenaticum (strain DSM

Query: 1 RHLPKM 6
RHLPK+
Sbjct: 236 RHLPKI 241


>sp|GPMA_METB6|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanoregula boonei (strain DSM 21154

Query: 2 HLPKMDITG 10
H+P +ITG
Sbjct: 195 HIPDNEITG 203


>sp|TRUB_KORCO|PROBABLE tRNA pseudouridine synthase B|Korarchaeum cryptofilum (strain OPF8)

Query: 1 RHLPKM 6
RHLPK+
Sbjct: 236 RHLPKI 241




65|Sequence|321|330|MDITGLSGNP

>sp|ISF_METTE|IRON-SULFUR flavoprotein|Methanosarcina thermophila

Query: 1 MDITGLSGNP 10
M ITG+SG+P
Sbjct: 1 MKITGISGSP 10


>sp|AROE_HALWD|SHIKIMATE dehydrogenase (NADP(+))|Haloquadratum walsbyi (strain DSM 16790

Query: 1 MDITGLSGNP 10
MDI GL GNP
Sbjct: 1 MDIYGLIGNP 10


>sp|AROE_NATPD|SHIKIMATE dehydrogenase (NADP(+))|Natronomonas pharaonis (strain ATCC 35678

Query: 1 MDITGLSGNP 10
MD+ GL GNP
Sbjct: 1 MDVYGLIGNP 10


>sp|AROE_HALSA|SHIKIMATE dehydrogenase (NADP(+))|Halobacterium salinarum (strain ATCC

Query: 1 MDITGLSGNP 10
MD+ GL GNP
Sbjct: 1 MDVYGLIGNP 10


>sp|AROE_HALS3|SHIKIMATE dehydrogenase (NADP(+))|Halobacterium salinarum (strain ATCC

Query: 1 MDITGLSGNP 10
MD+ GL GNP
Sbjct: 1 MDVYGLIGNP 10


>sp|AROE_HALLT|SHIKIMATE dehydrogenase (NADP(+))|Halorubrum lacusprofundi (strain ATCC

Query: 1 MDITGLSGNP 10
MD+ GL GNP
Sbjct: 1 MDVYGLIGNP 10


>sp|AROE_HALMA|SHIKIMATE dehydrogenase (NADP(+))|Haloarcula marismortui (strain ATCC 43049

Query: 1 MDITGLSGNP 10
MD+ GL GNP
Sbjct: 1 MDVYGLIGNP 10


>sp|AATI_METJA|A-TYPE ATP synthase subunit I|Methanocaldococcus jannaschii (strain ATCC

Query: 1 MDITGLSGN 9
MD+TG GN
Sbjct: 589 MDVTGFLGN 597


>sp|MT872_AERPE|DNA (cytosine-5-)-methyltransferase M.ApeKI|Aeropyrum pernix (strain

Query: 1 MDITGLSG 8
+D TGLSG
Sbjct: 74 LDFTGLSG 81


>sp|ISF1_METJA|IRON-SULFUR flavoprotein MJ0731|Methanocaldococcus jannaschii (strain ATCC

Query: 1 MDITGLSGNP 10
M + G+SG+P
Sbjct: 1 MKVFGISGSP 10


>sp|AMT3_ARCFU|AMMONIUM transporter Amt3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DITGLSGN 9
D++GL+GN
Sbjct: 66 DVSGLTGN 73


>sp|YB50_METTW|IRON-SULFUR cluster assembly SufBD family|Methanothermobacter

Query: 1 MDITGL 6
MDITGL
Sbjct: 386 MDITGL 391


>sp|Y1150_METTH|IRON-SULFUR cluster assembly SufBD family|Methanothermobacter

Query: 1 MDITGL 6
MDITGL
Sbjct: 386 MDITGL 391


>sp|Y1914_METTH|UPF0425 pyridoxal phosphate-dependent protein

Query: 2 DITGLSG 8
D+TGLSG
Sbjct: 33 DLTGLSG 39


>sp|ISF2_ARCFU|IRON-SULFUR flavoprotein AF_1519|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ITGLSGNP 10
I G+SG+P
Sbjct: 2 IVGISGSP 9


>sp|ISF2_METJA|IRON-SULFUR flavoprotein MJ1083|Methanocaldococcus jannaschii (strain ATCC

Query: 1 MDITGLSGNP 10
M + G+SG+P
Sbjct: 1 MKVIGISGSP 10


>sp|AROA_HALWD|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 MDITGLSGNP 10
++ITG +G P
Sbjct: 69 IEITGFNGRP 78


>sp|Y206_METKA|UPF0280 protein MK0206|Methanopyrus kandleri (strain AV19 /

Query: 2 DITGLSGNP 10
D G+SG P
Sbjct: 213 DFVGISGRP 221


>sp|Y916_METST|UPF0425 pyridoxal phosphate-dependent protein Msp_0916|Methanosphaera

Query: 1 MDITGLSG 8
+D+TGL+G
Sbjct: 31 IDLTGLAG 38


>sp|RFCL_METM7|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C7 /

Query: 2 DITGLSGN 9
++ GLSGN
Sbjct: 105 EVDGLSGN 112


>sp|RFCL_METM6|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C6 /

Query: 2 DITGLSGN 9
++ GLSGN
Sbjct: 105 EVDGLSGN 112


>sp|RFCL_META3|REPLICATION factor C large subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 DITGLSGN 9
++ GLSGN
Sbjct: 104 EVDGLSGN 111


>sp|SYFB_THEVO|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 1 MDITGLSGN 9
+DITG+ N
Sbjct: 221 VDITGMDSN 229


>sp|RFCL_METVS|REPLICATION factor C large subunit|Methanococcus vannielii (strain ATCC 35089

Query: 2 DITGLSGN 9
++ GLSGN
Sbjct: 105 EVDGLSGN 112


>sp|RFCL_METMP|REPLICATION factor C large subunit|Methanococcus maripaludis (strain DSM 14266

Query: 2 DITGLSGN 9
++ GLSGN
Sbjct: 105 EVDGLSGN 112


>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 2 DITGLSGN 9
++ GLSGN
Sbjct: 105 EVDGLSGN 112


>sp|THIM_METAR|HYDROXYETHYLTHIAZOLE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 MDITGLSGNP 10
+D G+SG+P
Sbjct: 140 VDSAGVSGDP 149


>sp|PYRC_METTH|DIHYDROOROTASE thermautotrophicus (strain ATCC 29096

Query: 1 MDITGLS 7
MD+TG+S
Sbjct: 142 MDLTGIS 148




66|Sequence|326|335|LSGNPYVKVN

>sp|APE1_SULTO|PROBABLE aminopeptidase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LSGNPYVK 8
LS NPYV+
Sbjct: 699 LSNNPYVR 706


>sp|Y994_METTH|PUTATIVE aminohydrolase MTH_994|Methanothermobacter thermautotrophicus

Query: 1 LSGNPYVKV 9
LSG+PY+ +
Sbjct: 355 LSGDPYLSI 363


>sp|Y1314_PYRHO|UPF0128 protein PH1314|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GNPYVKV 9
GNPY++V
Sbjct: 91 GNPYLEV 97


>sp|NADM_PYRNV|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 SGNPYVKV 9
+GNPYV +
Sbjct: 101 TGNPYVAL 108


>sp|Y021_METJA|PUTATIVE glycyl-radical enzyme activating enzyme|Methanocaldococcus

Query: 3 GNPYVKVN 10
GNP +K+N
Sbjct: 87 GNPLLKIN 94


>sp|MTRH_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanosarcina barkeri (strain

Query: 2 SGNPYV 7
+GNPYV
Sbjct: 68 TGNPYV 73


>sp|MTRH_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanosarcina acetivorans (strain

Query: 2 SGNPYV 7
+GNPYV
Sbjct: 68 TGNPYV 73


>sp|DNLJ_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LSGNPYV 7
++GNPY+
Sbjct: 7 VAGNPYI 13


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 1 LSGNPYVKVN 10
L GNPY N
Sbjct: 754 LEGNPYYFAN 763


>sp|NRPR2_METMA|GLOBAL nitrogen regulator NrpRII|Methanosarcina mazei (strain ATCC

Query: 1 LSGNPYVKV 9
LS PYVKV
Sbjct: 60 LSVTPYVKV 68


>sp|CBIJ_METTH|COBALT-PRECORRIN-6A reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LSGNPYVKV 9
LSG P+V+V
Sbjct: 57 LSGMPWVEV 65


>sp|TOP6B_METBU|TYPE 2 DNA topoisomerase 6|Methanococcoides burtonii (strain DSM 6242

Query: 1 LSGNPYV 7
SGNP+V
Sbjct: 348 FSGNPFV 354


>sp|Y864_THEVO|UPF0173 metal-dependent hydrolase TV0864|Thermoplasma volcanium (strain

Query: 1 LSGNPYVKV 9
L+GNP KV
Sbjct: 27 LTGNPMAKV 35


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LSGNPY 6
+SGNPY
Sbjct: 78 ISGNPY 83


>sp|RS4_SULTO|SMALL ribosomal subunit protein uS4|Sulfurisphaera tokodaii (strain DSM

Query: 3 GNPYVKVN 10
G+P++++N
Sbjct: 15 GHPWIRIN 22


>sp|AATC_METST|A-TYPE ATP synthase subunit C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LSGNPYVKV 9
L G PY K+
Sbjct: 185 LEGTPYAKI 193


>sp|TOP6B_METMA|TYPE 2 DNA topoisomerase 6|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SGNPYV 7
SGNP+V
Sbjct: 349 SGNPFV 354


>sp|TOP6B_METBF|TYPE 2 DNA topoisomerase 6|Methanosarcina barkeri (strain Fusaro /

Query: 2 SGNPYV 7
SGNP+V
Sbjct: 349 SGNPFV 354


>sp|PSB2_PYRIL|PROTEASOME subunit beta 2|Pyrobaculum islandicum (strain DSM 4184

Query: 2 SGNPYVK 8
SG+PY K
Sbjct: 132 SGSPYAK 138


>sp|PSB1_PYRNV|PROTEASOME subunit beta 1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 SGNPYVK 8
SG+PY K
Sbjct: 132 SGSPYAK 138


>sp|PSB1_PYRCJ|PROTEASOME subunit beta 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 SGNPYVK 8
SG+PY K
Sbjct: 132 SGSPYAK 138


>sp|MTXH_METBF|PUTATIVE methyltransferase mtx subunit H|Methanosarcina barkeri (strain

Query: 2 SGNPYV 7
+GNPY+
Sbjct: 68 TGNPYI 73


>sp|TOP6B_METAC|TYPE 2 DNA topoisomerase 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 SGNPYV 7
SGNP+V
Sbjct: 349 SGNPFV 354


>sp|AROA_AERPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 3 GNPYVKVN 10
GNP VKV+
Sbjct: 144 GNPPVKVS 151


>sp|PSB1_PYRAE|PROTEASOME subunit beta 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 SGNPYVK 8
SG+PY K
Sbjct: 132 SGSPYAK 138


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 4 NPYVKVN 10
NPY K+N
Sbjct: 391 NPYCKIN 397


>sp|PSB1_PYRAR|PROTEASOME subunit beta 1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 SGNPYVK 8
SG+PY K
Sbjct: 132 SGSPYAK 138


>sp|Y520_METJA|PUTATIVE NADH-ubiquinone oxidoreductase MJ0520|Methanocaldococcus jannaschii

Query: 2 SGNPYVKV 9
SG+PY K+
Sbjct: 116 SGSPYGKI 123




67|Sequence|331|340|YVKVNVYYGR

>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 2 VKVNVYYG 9
VKV +YYG
Sbjct: 750 VKVEIYYG 757


>sp|SYFB_THEGJ|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 1 YVKVNVYYGR 10
Y K+N+ YGR
Sbjct: 398 YGKMNLEYGR 407


>sp|PSTB_THEKO|PHOSPHATE import ATP-binding protein PstB|Thermococcus kodakarensis (strain

Query: 2 VKVNVYYGR 10
V +NVYYG+
Sbjct: 8 VNLNVYYGQ 16


>sp|MTAD_THEKO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YVKVNVYYG 9
YVKV Y G
Sbjct: 96 YVKVGAYLG 104


>sp|KPYK_THEAC|PYRUVATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 KVNVYYG 9
K+N+Y+G
Sbjct: 388 KLNIYFG 394


>sp|Y1574_METJA|UNCHARACTERIZED ATP-dependent helicase MJ1574|Methanocaldococcus jannaschii (strain

Query: 1 YVKVNVYYGR 10
Y +++YYGR
Sbjct: 595 YKDIDIYYGR 604


>sp|MTTB1_METMA|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 VNVYYG 9
VN YYG
Sbjct: 197 VNAYYG 202


>sp|UPP_AERPE|URACIL phosphoribosyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 VKVNVYYGR 10
+K+ VYY R
Sbjct: 114 LKIEVYYSR 122


>sp|HEM1_ARCFU|GLUTAMYL-TRNA reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YVKVNVYYG 9
Y K+N YG
Sbjct: 351 YAKLNARYG 359


>sp|KDGK_THEAC|2-DEHYDRO-3-DEOXYGLUCONOKINASE acidophilum (strain ATCC 25905

Query: 2 VKVNVYYG 9
V V++YYG
Sbjct: 276 VDVSIYYG 283


>sp|LEUD_SULTO|3-ISOPROPYLMALATE dehydratase small subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YVKVNVYYGR 10
YVK+NV G
Sbjct: 117 YVKINVETGE 126


>sp|DP2S_ARCFU|DNA polymerase II small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 VKVNVYYGR 10
VKV +Y+GR
Sbjct: 363 VKVLIYHGR 371


>sp|PSTB_PYRFU|PHOSPHATE import ATP-binding protein PstB|Pyrococcus furiosus (strain ATCC

Query: 2 VKVNVYYGR 10
+ ++VYYGR
Sbjct: 8 INLHVYYGR 16




68|Sequence|336|345|VYYGRKRIAK

>sp|FEN_PICTO|FLAP endonuclease 1|Picrophilus torridus (strain ATCC 700027

Query: 3 YGRKRIA 9
YGR+RIA
Sbjct: 191 YGRRRIA 197


>sp|CAS6L_PYRFU|PUTATIVE CRISPR-associated endoribonuclease-like protein Cas6|Pyrococcus

Query: 2 YYGRKRIAK 10
YYG K IAK
Sbjct: 209 YYGSKEIAK 217


>sp|PDXT_KORCO|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Korarchaeum cryptofilum (strain

Query: 2 YYGRKR 7
YYGR+R
Sbjct: 117 YYGRQR 122


>sp|PDXT_SACI2|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus (strain

Query: 2 YYGRKR 7
YYGR+R
Sbjct: 118 YYGRQR 123


>sp|RS2_METKA|SMALL ribosomal subunit protein uS2|Methanopyrus kandleri (strain AV19

Query: 2 YYGRKRIAK 10
YYG+K ++K
Sbjct: 76 YYGQKPVSK 84


>sp|PDXT_SACI1|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus (strain

Query: 2 YYGRKR 7
YYGR+R
Sbjct: 118 YYGRQR 123


>sp|Y3504_METJA|UNCHARACTERIZED protein MJECL04|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VYYGRKRIAK 10
V YGR+RI K
Sbjct: 25 VIYGRRRIGK 34


>sp|PDXT_SULTO|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Sulfurisphaera tokodaii (strain

Query: 2 YYGRKR 7
YYGR+R
Sbjct: 118 YYGRQR 123


>sp|PDXT_SACI7|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus (strain

Query: 2 YYGRKR 7
YYGR+R
Sbjct: 118 YYGRQR 123


>sp|PDXT_SACI6|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus (strain

Query: 2 YYGRKR 7
YYGR+R
Sbjct: 118 YYGRQR 123


>sp|PDXT_SACI4|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus (strain

Query: 2 YYGRKR 7
YYGR+R
Sbjct: 118 YYGRQR 123


>sp|PDXT_SACI3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus (strain

Query: 2 YYGRKR 7
YYGR+R
Sbjct: 118 YYGRQR 123


>sp|FTSZ1_PYRHO|CELL division protein FtsZ 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 YGRKRIAK 10
YG KR+AK
Sbjct: 179 YGLKRLAK 186


>sp|FTSZ1_PYRAB|CELL division protein FtsZ 1|Pyrococcus abyssi (strain GE5 /

Query: 3 YGRKRIAK 10
YG KR+AK
Sbjct: 179 YGLKRLAK 186


>sp|RHMD_CALMQ|PUTATIVE L-rhamnonate dehydratase|Caldivirga maquilingensis (strain ATCC

Query: 1 VYYGRKRI 8
+YYGR+ I
Sbjct: 120 IYYGRRGI 127


>sp|Y423_METJA|UNCHARACTERIZED ATP-binding protein MJ0423|Methanocaldococcus jannaschii (strain

Query: 1 VYYGRKRIAK 10
+ YGR+R+ K
Sbjct: 30 ILYGRRRVGK 39


>sp|PUS10_CENSY|TRNA pseudouridine synthase Pus10|Cenarchaeum symbiosum (strain A)

Query: 1 VYYGRKRIAK 10
VY GR+R+ +
Sbjct: 300 VYEGRRRVER 309


>sp|PDXT_SULAC|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Sulfolobus acidocaldarius

Query: 2 YYGRKR 7
YYGR+R
Sbjct: 118 YYGRQR 123


>sp|PURP_PYRAB|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus abyssi (strain GE5 /

Query: 2 YYGRKRIAK 10
Y+G KR+ K
Sbjct: 91 YFGNKRVLK 99


>sp|PDXT_METS5|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Metallosphaera sedula (strain

Query: 2 YYGRKR 7
YYGR+R
Sbjct: 116 YYGRQR 121


>sp|PSTB_PYRFU|PHOSPHATE import ATP-binding protein PstB|Pyrococcus furiosus (strain ATCC

Query: 1 VYYGRKRIAK 10
VYYGR + +
Sbjct: 12 VYYGRNHVLR 21


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VYYGRKRIAK 10
+Y G+KR++K
Sbjct: 980 LYEGKKRVSK 989


>sp|Y626_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB06260|Pyrococcus abyssi (strain GE5 /

Query: 3 YGRKRIAK 10
YG++RI K
Sbjct: 270 YGKRRIIK 277


>sp|Y1331_ARCFU|UNCHARACTERIZED protein AF_1331|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YYGRKRI 8
YYGRK +
Sbjct: 257 YYGRKNL 263




69|Sequence|341|350|KRIAKKKTHV

>sp|AMZA_SACI1|ARCHAEMETZINCIN islandicus (strain Y.N.15.51 /

Query: 1 KRIAKKKTH 9
KR+ K+ TH
Sbjct: 123 KRVVKEVTH 131


>sp|AMZA_SACI7|ARCHAEMETZINCIN islandicus (strain Y.G.57.14 /

Query: 1 KRIAKKKTH 9
KR+ K+ TH
Sbjct: 123 KRVVKEVTH 131


>sp|AMZA_SACI6|ARCHAEMETZINCIN islandicus (strain M.16.4 /

Query: 1 KRIAKKKTH 9
KR+ K+ TH
Sbjct: 123 KRVVKEVTH 131


>sp|AMZA_SACI4|ARCHAEMETZINCIN islandicus (strain M.14.25 /

Query: 1 KRIAKKKTH 9
KR+ K+ TH
Sbjct: 123 KRVVKEVTH 131


>sp|AMZA_SACI3|ARCHAEMETZINCIN islandicus (strain M.16.27) (Sulfolobus

Query: 1 KRIAKKKTH 9
KR+ K+ TH
Sbjct: 123 KRVVKEVTH 131


>sp|AMZA_SACI2|ARCHAEMETZINCIN islandicus (strain L.S.2.15 /

Query: 1 KRIAKKKTH 9
KR+ K+ TH
Sbjct: 123 KRVVKEVTH 131




70|Sequence|346|355|KKTHVKKCTL

>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri

Query: 1 KKTHVKK 7
KK+H+KK
Sbjct: 3 KKSHIKK 9


>sp|Y732_METJA|UNCHARACTERIZED protein MJ0732|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KKTHVKKC 8
K+ H+KKC
Sbjct: 374 KEEHLKKC 381




71|Sequence|351|360|KKCTLNPIFN

>sp|TRPC_PYRAB|INDOLE-3-GLYCEROL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 KKCTLNPI 8
K+CT NPI
Sbjct: 11 KRCTKNPI 18


>sp|SYT_METMP|THREONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KCTLNPIF 9
KC++ PIF
Sbjct: 614 KCSMQPIF 621


>sp|SYT_METM7|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 KCTLNPIF 9
KC++ PIF
Sbjct: 614 KCSVQPIF 621


>sp|SYT_METM6|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 KCTLNPIF 9
KC++ PIF
Sbjct: 614 KCSVQPIF 621


>sp|SYT_METM5|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 KCTLNPIF 9
KC++ PIF
Sbjct: 614 KCSVQPIF 621


>sp|SYT_METVS|THREONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 KCTLNPIF 9
KC++ PIF
Sbjct: 614 KCSVQPIF 621


>sp|SYT_META3|THREONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 CTLNPIF 9
C+L PIF
Sbjct: 623 CSLQPIF 629


>sp|Y417_METJA|UNCHARACTERIZED protein MJ0417|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KCTLNP 7
KC+LNP
Sbjct: 13 KCSLNP 18


>sp|DTDA_METVS|D-AMINOACYL-TRNA deacylase|Methanococcus vannielii (strain ATCC 35089

Query: 3 CTLNPIFN 10
C NP+FN
Sbjct: 86 CHCNPVFN 93


>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 3 CTLNPIFN 10
C L P+FN
Sbjct: 121 CWLYPVFN 128


>sp|Y1398_METMP|UNCHARACTERIZED metallohydrolase MMP1398|Methanococcus maripaludis (strain DSM

Query: 5 LNPIFN 10
+NPIFN
Sbjct: 246 INPIFN 251




72|Sequence|356|365|NPIFNESFIY

>sp|ANTRB_HALVD|PUTATIVE ABC transporter anion-binding protein|Haloferax volcanii (strain

Query: 1 NPIFNESF 8
NP+F E F
Sbjct: 71 NPVFEEKF 78


>sp|GLPK2_SACS2|GLYCEROL kinase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NPIFNESFI 9
NPIF+E+ +
Sbjct: 274 NPIFSENLL 282


>sp|Y978_PYRFU|UPF0252 protein PF0978|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NPIFNESFI 9
NPIF E ++
Sbjct: 266 NPIFKEQYL 274


>sp|DNAG_METVS|DNA primase DnaG|Methanococcus vannielii (strain ATCC 35089

Query: 1 NPIFNESFI 9
NP+ NE +
Sbjct: 280 NPVLNEELV 288


>sp|IF2P_AERPE|PROBABLE translation initiation factor IF-2|Aeropyrum pernix (strain ATCC

Query: 3 IFNESFIY 10
IF ES IY
Sbjct: 441 IFRESMIY 448


>sp|Y1398_METMP|UNCHARACTERIZED metallohydrolase MMP1398|Methanococcus maripaludis (strain DSM

Query: 1 NPIFNESF 8
NPIFN +F
Sbjct: 247 NPIFNPAF 254


>sp|AROC_METJA|CHORISMATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NPIFNE 6
NPIFN+
Sbjct: 237 NPIFNK 242


>sp|SYDND_METJA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NPIFNESFI 9
N ++NE FI
Sbjct: 155 NTLYNEGFI 163




73|Sequence|361|370|ESFIYDIPTD

>sp|URED_CENSY|UREASE accessory protein UreD|Cenarchaeum symbiosum (strain A)

Query: 1 ESFIYDI 7
ESF+YDI
Sbjct: 158 ESFLYDI 164


>sp|SYS2_METBF|TYPE-2 serine--tRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ESFIYDIPTD 10
ESFI +P D
Sbjct: 99 ESFIIKVPAD 108


>sp|KHSE_THEKO|HOMOSERINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 YDIPTD 10
YD+PTD
Sbjct: 45 YDVPTD 50


>sp|RISB_PYRAR|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 IYDIPT 9
+YDIPT
Sbjct: 43 VYDIPT 48


>sp|RS19E_METTH|SMALL ribosomal subunit protein eS19|Methanothermobacter

Query: 4 IYDIPTD 10
+YD+P D
Sbjct: 4 VYDVPAD 10


>sp|RS19E_ARCFU|SMALL ribosomal subunit protein eS19|Archaeoglobus fulgidus (strain

Query: 4 IYDIPTD 10
+YD+P D
Sbjct: 4 VYDVPAD 10


>sp|CFBC_METBF|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina barkeri

Query: 4 IYDIPTD 10
IYD+P D
Sbjct: 123 IYDVPGD 129


>sp|CFBC_METAC|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina acetivorans

Query: 4 IYDIPTD 10
IYD+P D
Sbjct: 123 IYDVPGD 129


>sp|SYS_METS5|SERINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 ESFIYDIPTD 10
E FI+ +P D
Sbjct: 306 EQFIFSLPED 315


>sp|SYK2_METAC|LYSINE--TRNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 SFIYDIPTD 10
+FIYD P +
Sbjct: 394 TFIYDFPVE 402


>sp|RS19E_METJA|SMALL ribosomal subunit protein eS19|Methanocaldococcus jannaschii

Query: 4 IYDIPTD 10
+YD+P D
Sbjct: 4 VYDVPAD 10


>sp|PSA_PYRAE|PROTEASOME subunit alpha|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 FIYDIPTD 10
FIYD P D
Sbjct: 102 FIYDEPID 109


>sp|DPOL1_METTH|DNA polymerase PolB subunit 1|Methanothermobacter thermautotrophicus

Query: 3 FIYDIPTD 10
+IY IPTD
Sbjct: 46 YIYAIPTD 53


>sp|PRNK_PYRFU|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PF0112|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SFIYDIPTD 10
S YD+P D
Sbjct: 7 SLTYDVPED 15


>sp|Y570_METJA|UNCHARACTERIZED protein MJ0570|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ESFIYDIP 8
E+F++D P
Sbjct: 183 ETFVFDAP 190


>sp|FSX1_UNCAX|FUSEXIN 1|Uncultured archaeon

Query: 2 SFIYDIP 8
SF+YD P
Sbjct: 315 SFVYDTP 321


>sp|TOP6A_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 5 YDIPTD 10
YD+PTD
Sbjct: 282 YDLPTD 287


>sp|MDH_THETK|MALATE dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 1 ESFIYDIPTD 10
+SF++ +P D
Sbjct: 183 KSFVFGVPLD 192


>sp|SYS_PYRNV|SERINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 ESFIYDIPTD 10
E F++ +P D
Sbjct: 299 EQFVFSLPED 308


>sp|SYK_METMJ|LYSINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 SFIYDIPTD 10
+FIYD P +
Sbjct: 376 TFIYDFPIE 384


>sp|SYK2_METMA|LYSINE--TRNA ligase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SFIYDIPTD 10
+FIYD P +
Sbjct: 394 TFIYDFPVE 402


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ESFIYDIPTD 10
E +IYDIP +
Sbjct: 437 EFYIYDIPPE 446


>sp|RS19E_THEKO|SMALL ribosomal subunit protein eS19|Thermococcus kodakarensis (strain

Query: 4 IYDIPTD 10
+YD+P D
Sbjct: 4 VYDVPGD 10


>sp|RS19E_PYRAB|SMALL ribosomal subunit protein eS19|Pyrococcus abyssi (strain GE5 /

Query: 4 IYDIPTD 10
+YD+P D
Sbjct: 4 VYDVPGD 10


>sp|RS19E_PYRFU|SMALL ribosomal subunit protein eS19|Pyrococcus furiosus (strain ATCC

Query: 4 IYDIPTD 10
+YD+P D
Sbjct: 4 VYDVPGD 10


>sp|RS19E_PYRHO|SMALL ribosomal subunit protein eS19|Pyrococcus horikoshii (strain ATCC

Query: 4 IYDIPTD 10
+YD+P D
Sbjct: 4 VYDVPGD 10


>sp|Y1542_METJA|UNCHARACTERIZED protein MJ1542|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FIYDIPTD 10
FI+ +PTD
Sbjct: 753 FIFTVPTD 760


>sp|RPIA_METMP|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus maripaludis (strain DSM 14266

Query: 1 ESFIYDIPT 9
E +IY +PT
Sbjct: 59 ELYIYGVPT 67


>sp|SYS_PYRAE|SERINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ESFIYDIPTD 10
E F++ +P D
Sbjct: 301 EQFVFSLPED 310


>sp|CAS1C_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 3|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 SFIYDI 7
SF+YDI
Sbjct: 216 SFVYDI 221


>sp|TOP6A_HALSA|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 700922

Query: 5 YDIPTD 10
YD+PTD
Sbjct: 295 YDLPTD 300


>sp|TOP6A_HALS3|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 29341

Query: 5 YDIPTD 10
YD+PTD
Sbjct: 295 YDLPTD 300


>sp|TOP6A_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 5 YDIPTD 10
YD+PTD
Sbjct: 297 YDLPTD 302


>sp|RPIA_METM5|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus maripaludis (strain C5 /

Query: 1 ESFIYDIPT 9
E +IY +PT
Sbjct: 59 ELYIYGVPT 67


>sp|SYS_PYRIL|SERINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ESFIYDIPTD 10
E F++ +P D
Sbjct: 300 EQFVFSLPED 309


>sp|RPIA_METM7|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus maripaludis (strain C7 /

Query: 1 ESFIYDIPT 9
E +IY +PT
Sbjct: 59 ELYIYGVPT 67


>sp|RPIA_METM6|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus maripaludis (strain C6 /

Query: 1 ESFIYDIPT 9
E +IY +PT
Sbjct: 59 ELYIYGVPT 67


>sp|RPIA_METVS|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus vannielii (strain ATCC 35089

Query: 1 ESFIYDIPT 9
E +IY +PT
Sbjct: 59 ELYIYGVPT 67


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 4 IYDIPTD 10
IY+IP D
Sbjct: 112 IYEIPAD 118




74|Sequence|366|375|DIPTDLLPDI

>sp|HEM3_METTH|PROBABLE porphobilinogen deaminase|Methanothermobacter thermautotrophicus

Query: 1 DIPTDLLPDI 10
D+P+DL PD+
Sbjct: 78 DVPSDLDPDL 87


>sp|NCPP_PYRAR|PROBABLE inosine/xanthosine triphosphatase|Pyrobaculum arsenaticum (strain

Query: 2 IPTDLLPDI 10
IPT LPD+
Sbjct: 108 IPTAFLPDV 116


>sp|PURL_THESM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus sibiricus (strain DSM 12597

Query: 1 DIPTDLLPDI 10
D+P DLL D+
Sbjct: 347 DLPIDLLADV 356


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DIPTDLLPDI 10
DIP DL+P +
Sbjct: 81 DIPEDLIPGL 90


>sp|NNR_ARCFU|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Archaeoglobus fulgidus (strain

Query: 1 DIPTDLLPD 9
D+PT L PD
Sbjct: 147 DVPTGLDPD 155


>sp|GLPK_THEKO|GLYCEROL kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DIPTDLLPDI 10
DIP +LP++
Sbjct: 203 DIPESVLPEV 212


>sp|GLPK_HALSA|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DIPTDLLPDI 10
DIP ++LP++
Sbjct: 216 DIPREMLPEV 225


>sp|GLPK_HALS3|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DIPTDLLPDI 10
DIP ++LP++
Sbjct: 216 DIPREMLPEV 225


>sp|IF6_METAC|TRANSLATION initiation factor 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DIPTDLLPD 9
DIP +LPD
Sbjct: 83 DIPVGILPD 91


>sp|KPTA_THEVO|PROBABLE RNA 2'-phosphotransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DIPTDLLPD 9
D+PTD +PD
Sbjct: 116 DLPTDGIPD 124


>sp|NNR_METKA|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanopyrus kandleri (strain

Query: 1 DIPTDLLPD 9
DIPT L PD
Sbjct: 160 DIPTGLDPD 168


>sp|Y329_METJA|UNCHARACTERIZED protein MJ0329|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DIPTDLL 7
DIPTDL+
Sbjct: 241 DIPTDLI 247


>sp|Y835_METJA|UNCHARACTERIZED protein MJ0835|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IPTDLLPDI 10
IP D +PDI
Sbjct: 353 IPDDKIPDI 361


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 1 DIPTDLLPD 9
D P D LPD
Sbjct: 460 DAPGDALPD 468


>sp|PURL_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus kodakarensis (strain ATCC

Query: 1 DIPTDLLPDI 10
D+P DLL ++
Sbjct: 347 DLPIDLLTEV 356


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 DIPTDLLPDI 10
+IP DL P+I
Sbjct: 130 EIPVDLGPEI 139


>sp|GLPK2_SULAC|GLYCEROL kinase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DIPTDLLPDI 10
+IP +LPD+
Sbjct: 207 NIPEAILPDV 216


>sp|GATD_PYRFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PTDLLPDI 10
P+DL+P I
Sbjct: 343 PSDLIPSI 350


>sp|GUAAA_METS3|GMP synthase [glutamine-hydrolyzing] subunit A|Methanobrevibacter

Query: 2 IPTDLLPD 9
IPT+L+P+
Sbjct: 25 IPTELVPN 32


>sp|ACDA1_PYRFU|ACETATE--COA ligase [ADP-forming] I subunit|Pyrococcus furiosus (strain ATCC

Query: 3 PTDLLP 8
PTD+LP
Sbjct: 151 PTDVLP 156


>sp|HIS1_PYRAE|ATP phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 IPTDLLPDI 10
+P D+LPD+
Sbjct: 252 VPEDVLPDL 260


>sp|RS19E_METTH|SMALL ribosomal subunit protein eS19|Methanothermobacter

Query: 1 DIPTDLL 7
D+P DLL
Sbjct: 6 DVPADLL 12


>sp|HEM3_PYRNV|PROBABLE porphobilinogen deaminase|Pyrobaculum neutrophilum (strain DSM

Query: 1 DIPTDLLPDI 10
D+P+DL P +
Sbjct: 81 DLPSDLTPGL 90


>sp|RS19E_ARCFU|SMALL ribosomal subunit protein eS19|Archaeoglobus fulgidus (strain

Query: 1 DIPTDLL 7
D+P DLL
Sbjct: 6 DVPADLL 12


>sp|HIS1_PYRCJ|ATP phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 2 IPTDLLPDI 10
+P D LPDI
Sbjct: 252 VPEDELPDI 260


>sp|HIS1_PYRIL|ATP phosphoribosyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 IPTDLLPDI 10
+P D+LPD+
Sbjct: 252 VPEDILPDL 260


>sp|HIS8_METTH|HISTIDINOL-PHOSPHATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 4 TDLLPD 9
TDLLPD
Sbjct: 212 TDLLPD 217


>sp|GLPK_HALVD|GLYCEROL kinase|Haloferax volcanii (strain ATCC 29605

Query: 1 DIPTDLLPDI 10
++P +LLP++
Sbjct: 217 NVPRELLPEV 226


>sp|SYFA_METJA|PHENYLALANINE--TRNA ligase alpha subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DIPTDLLPDI 10
DIP DLL +
Sbjct: 288 DIPEDLLSKV 297


>sp|TOP6B_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DIPTDLLPDI 10
D+ D+LPD+
Sbjct: 671 DVIADILPDM 680


>sp|IF6_METBU|TRANSLATION initiation factor 6|Methanococcoides burtonii (strain DSM 6242

Query: 1 DIPTDLLPDI 10
++P ++LPD+
Sbjct: 83 EVPVEVLPDM 92


>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 IPTDLLPDI 10
+PT+L P I
Sbjct: 706 VPTELQPQI 714


>sp|APGM_METS5|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Metallosphaera sedula (strain ATCC 51363

Query: 2 IPTDLLPD 9
+PT+++PD
Sbjct: 368 VPTNIIPD 375


>sp|Y2300_METMA|UPF0173 metal-dependent hydrolase MM_2300|Methanosarcina mazei (strain

Query: 3 PTDLLPDI 10
P DL PDI
Sbjct: 38 PEDLNPDI 45


>sp|KPTA_THEAC|PROBABLE RNA 2'-phosphotransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 DIPTDLLPDI 10
D+P D +PD+
Sbjct: 116 DLPEDNIPDV 125


>sp|Y1033_PYRAR|UPF0210 protein Pars_1033|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 IPTDLLPDI 10
IP D+ PD+
Sbjct: 366 IPADVGPDV 374




75|Sequence|371|380|LLPDISIEFL

>sp|RS5_NANEQ|SMALL ribosomal subunit protein uS5|Nanoarchaeum equitans (strain

Query: 1 LLPDISIEFL 10
LLP++ +EF+
Sbjct: 44 LLPNLEVEFM 53


>sp|PUR7_METBF|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LLPDISIEF 9
LLPD +EF
Sbjct: 171 LLPDFKLEF 179


>sp|PUR7_METAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LLPDISIEF 9
LLPD +EF
Sbjct: 171 LLPDFKLEF 179


>sp|PUR7_METMA|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LLPDISIEF 9
LLPD +EF
Sbjct: 171 LLPDFKLEF 179


>sp|PUR7_METBU|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LLPDISIEF 9
LLPD +EF
Sbjct: 171 LLPDFKLEF 179


>sp|Y1880_METMJ|UNCHARACTERIZED solute-binding protein Memar_1880|Methanoculleus marisnigri (strain

Query: 3 PDISIEFL 10
PD+ IEF+
Sbjct: 307 PDLGIEFV 314


>sp|COBQ_METKA|PROBABLE cobyric acid synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 PDISIEFL 10
PD+ +EF+
Sbjct: 273 PDVRVEFV 280


>sp|RNJ_METJA|RIBONUCLEASE J|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLPDISIEFL 10
L P+I++EF+
Sbjct: 138 LTPNITLEFI 147


>sp|IDI2_THEKO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 DISIEFL 10
D+S+EFL
Sbjct: 53 DLSVEFL 59


>sp|IDI2_THEON|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus onnurineus (strain NA1)

Query: 4 DISIEFL 10
D+S+EFL
Sbjct: 53 DLSVEFL 59


>sp|THIL_METTH|THIAMINE-MONOPHOSPHATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 LPDISIEF 9
LPD+ +EF
Sbjct: 97 LPDLELEF 104


>sp|PUR7_METTH|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LLPDISIEF 9
+LPD +EF
Sbjct: 174 ILPDFKLEF 182




76|Sequence|376|385|SIEFLVIDFD

>sp|APBC_PYRHO|IRON-SULFUR cluster carrier protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SIEFLVIDF 9
S++F++IDF
Sbjct: 148 SLDFMIIDF 156


>sp|APBC_PYRAB|IRON-SULFUR cluster carrier protein|Pyrococcus abyssi (strain GE5 /

Query: 1 SIEFLVIDF 9
S++F++IDF
Sbjct: 148 SLDFMIIDF 156


>sp|APBC_PYRFU|IRON-SULFUR cluster carrier protein|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IEFLVIDF 9
++F++IDF
Sbjct: 149 LDFMIIDF 156


>sp|PYRC_THEAC|DIHYDROOROTASE acidophilum (strain ATCC 25905

Query: 3 EFLVIDF 9
+F+VIDF
Sbjct: 349 DFMVIDF 355




77|Sequence|381|390|VIDFDRTTKN

>sp|RPO1C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Archaeoglobus fulgidus (strain ATCC

Query: 2 IDFDRTTKN 10
+DF RTT N
Sbjct: 251 VDFTRTTTN 259


>sp|Y1496_PYRFU|UPF0252 protein PF1496|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VIDFDRTTK 9
+IDF TTK
Sbjct: 44 IIDFTSTTK 52


>sp|Y1375_METJA|UNCHARACTERIZED membrane protein MJ1375|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VIDFDRTTKN 10
+ID TTKN
Sbjct: 202 LIDIKNTTKN 211




78|Sequence|386|395|RTTKNEVVGR

>sp|RRP42_SACI7|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 RTTKNEVVGR 10
R KNEVVG+
Sbjct: 181 RVNKNEVVGK 190


>sp|RRP42_SACI6|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.4 /

Query: 1 RTTKNEVVGR 10
R KNEVVG+
Sbjct: 181 RVNKNEVVGK 190


>sp|RRP42_SACI2|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 RTTKNEVVGR 10
R KNEVVG+
Sbjct: 181 RVNKNEVVGK 190


>sp|RRP42_SACI4|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.14.25 /

Query: 1 RTTKNEVVGR 10
R KNEVVG+
Sbjct: 181 RVNKNEVVGK 190


>sp|RRP42_SACI3|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.27)

Query: 1 RTTKNEVVGR 10
R KNEVVG+
Sbjct: 181 RVNKNEVVGK 190


>sp|RRP42_SACI1|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 RTTKNEVVGR 10
R KNEVVG+
Sbjct: 181 RVNKNEVVGK 190


>sp|YSO2_ACIAM|UNCHARACTERIZED transporter in sor 3'region|Acidianus ambivalens (Desulfurolobus

Query: 1 RTTKNEVVG 9
+TTK EV+G
Sbjct: 76 KTTKTEVIG 84


>sp|FTSY_METJA|SIGNAL recognition particle receptor FtsY|Methanocaldococcus jannaschii

Query: 4 KNEVVGR 10
KNE+VGR
Sbjct: 152 KNELVGR 158


>sp|RRP42_SACS2|EXOSOME complex component Rrp42|Saccharolobus solfataricus (strain ATCC

Query: 4 KNEVVGR 10
KNEVVG+
Sbjct: 184 KNEVVGK 190


>sp|RS24_METPE|SMALL ribosomal subunit protein eS24|Methanosphaerula palustris (strain

Query: 3 TKNEVVGR 10
T+NE++GR
Sbjct: 9 TRNELLGR 16


>sp|TRPD_SACI7|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 3 TKNEVVG 9
+KNE+VG
Sbjct: 51 SKNEIVG 57


>sp|TRPD_SACI2|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 3 TKNEVVG 9
+KNE+VG
Sbjct: 51 SKNEIVG 57


>sp|TRPD_SACI6|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain M.16.4

Query: 3 TKNEVVG 9
+KNE+VG
Sbjct: 51 SKNEIVG 57


>sp|TRPD_SACI4|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 3 TKNEVVG 9
+KNE+VG
Sbjct: 51 SKNEIVG 57


>sp|TRPD_SACI3|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 3 TKNEVVG 9
+KNE+VG
Sbjct: 51 SKNEIVG 57


>sp|TRPD_SACI1|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 3 TKNEVVG 9
+KNE+VG
Sbjct: 51 SKNEIVG 57




79|Sequence|391|400|EVVGRLILGA

>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 EVVGRLILG 9
E+VG LI+G
Sbjct: 838 ELVGHLIIG 846


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 EVVGRLILG 9
E+VG LI+G
Sbjct: 838 ELVGHLIIG 846


>sp|KORB_METTM|2-OXOGLUTARATE synthase subunit KorB|Methanothermobacter marburgensis (strain ATCC

Query: 1 EVVGRLILG 9
EV G+LI+G
Sbjct: 242 EVEGKLIIG 250


>sp|PYRF_AERPE|OROTIDINE 5'-phosphate decarboxylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EVVGRLILGA 10
E+VGR++ G+
Sbjct: 203 EIVGRMVAGS 212


>sp|Y1051_METJA|UNCHARACTERIZED protein MJ1051|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EVVGRLIL 8
EV+G LIL
Sbjct: 341 EVIGNLIL 348


>sp|CCA_PYRAE|CCA-ADDING enzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EVVGRLILGA 10
EV+G ++GA
Sbjct: 365 EVIGPFVVGA 374


>sp|FAEHP_METTH|BIFUNCTIONAL enzyme Fae/Hps|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 VVGRLILGA 10
VVGR I+G+
Sbjct: 367 VVGRYIIGS 375


>sp|CCA_PYRNV|CCA-ADDING enzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 EVVGRLILG 9
EVVG +LG
Sbjct: 362 EVVGPFVLG 370




80|Sequence|396|405|LILGAHSVTA

>sp|CAPPA_HALSA|PHOSPHOENOLPYRUVATE carboxylase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ILGAHSVT 9
+LGAH++T
Sbjct: 396 LLGAHALT 403


>sp|CAPPA_HALS3|PHOSPHOENOLPYRUVATE carboxylase|Halobacterium salinarum (strain ATCC 29341

Query: 2 ILGAHSVT 9
+LGAH++T
Sbjct: 396 LLGAHALT 403


>sp|R15PI_PYRHO|RIBOSE 1,5-bisphosphate isomerase|Pyrococcus horikoshii (strain ATCC

Query: 1 LILGAHSVTA 10
+++GA S+TA
Sbjct: 199 VVMGADSITA 208


>sp|R15PI_PYRFU|RIBOSE 1,5-bisphosphate isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LILGAHSVTA 10
+++GA S+TA
Sbjct: 199 VVMGADSITA 208


>sp|R15PI_PYRAB|RIBOSE 1,5-bisphosphate isomerase|Pyrococcus abyssi (strain GE5 /

Query: 1 LILGAHSVTA 10
+++GA S+TA
Sbjct: 199 VVMGADSITA 208


>sp|KPRS_SACS2|RIBOSE-PHOSPHATE pyrophosphokinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LGAHSVTA 10
LGA SVTA
Sbjct: 235 LGAKSVTA 242




81|Sequence|401|410|HSVTASGAEH

>sp|AMPD_ARCFU|ANHYDROMEVALONATE phosphate decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HSVTASGAEH 10
+S+T +G EH
Sbjct: 283 YSITPAGKEH 292


>sp|G1PDH_ARCFU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SVTASGAEH 10
S ASGAEH
Sbjct: 239 SRPASGAEH 247


>sp|G1PDH_PYRHO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 ASGAEH 10
ASGAEH
Sbjct: 242 ASGAEH 247




82|Sequence|406|415|SGAEHWREVC

>sp|FPOF_METMA|F(420)H(2) dehydrogenase subunit F|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 AEHWREVC 10
AEH++EVC
Sbjct: 325 AEHFQEVC 332


>sp|MDH_THEAC|MALATE dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GAEHWR 7
GA HWR
Sbjct: 50 GAPHWR 55


>sp|AATA_META3|A-TYPE ATP synthase subunit A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 AEHWREV 9
AE WRE+
Sbjct: 451 AEDWREI 457


>sp|TRMY_AERPE|TRNA (pseudouridine(54)-N(1))-methyltransferase|Aeropyrum pernix (strain

Query: 3 AEHWREVC 10
+ HW E+C
Sbjct: 122 SSHWGEMC 129


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 AEHWREVC 10
AE W+E C
Sbjct: 696 AETWQEAC 703


>sp|SYS_METMA|SERINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GAEHWREVC 10
GAE R+VC
Sbjct: 413 GAEEIRKVC 421


>sp|DNLI_METJA|DNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 WREVC 10
WR+VC
Sbjct: 3 WRDVC 7


>sp|Y286_KORCO|UPF0282 protein Kcr_0286|Korarchaeum cryptofilum (strain OPF8)

Query: 5 HWREV 9
HWRE+
Sbjct: 55 HWREI 59


>sp|PUR1_METTH|AMIDOPHOSPHORIBOSYLTRANSFERASE thermautotrophicus (strain ATCC 29096

Query: 2 GAEHWREV 9
GAEH R+V
Sbjct: 216 GAEHVRDV 223


>sp|Y209_ARCFU|UNCHARACTERIZED protein AF_0209|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GAEHWREV 9
GAEH+R++
Sbjct: 188 GAEHFRKM 195


>sp|RIO2_ARCFU|RIO-TYPE serine/threonine-protein kinase Rio2|Archaeoglobus fulgidus (strain

Query: 2 GAEHWREV 9
G E WRE+
Sbjct: 243 GEEGWREI 250


>sp|SRP54_THEON|SIGNAL recognition particle 54 kDa|Thermococcus onnurineus (strain NA1)

Query: 2 GAEHWRE 8
G EH+RE
Sbjct: 174 GVEHFRE 180


>sp|SRP54_THEKO|SIGNAL recognition particle 54 kDa|Thermococcus kodakarensis (strain ATCC

Query: 2 GAEHWRE 8
G EH+RE
Sbjct: 174 GVEHFRE 180


>sp|KGSDH_SACS2|2,5-DIOXOPENTANOATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SGAEHWREV 9
SGA W+E+
Sbjct: 452 SGATTWKEM 460


>sp|RL18E_THEAC|LARGE ribosomal subunit protein eL18|Thermoplasma acidophilum (strain

Query: 1 SGAEHWREV 9
SG++ WR++
Sbjct: 25 SGSKLWRDI 33


>sp|DPS_SACS2|DNA protection during starvation protein|Saccharolobus solfataricus

Query: 6 WREVC 10
W+EVC
Sbjct: 131 WKEVC 135


>sp|METAA_THEXX|HOMOSERINE O-acetyltransferase|Thermoplasmatales archaeon (strain BRNA1)

Query: 1 SGAEHWREVC 10
S ++W E+C
Sbjct: 116 SEVDYWDELC 125


>sp|PROB_METMA|GLUTAMATE 5-kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GAEHWREVC 10
G +H RE C
Sbjct: 27 GCDHTRENC 35


>sp|RPO2N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanocaldococcus jannaschii (strain

Query: 5 HWREVC 10
HW ++C
Sbjct: 450 HWGKIC 455


>sp|LCAO_UNCAR|LONG-CHAIN alcohol oxidase|Uncultured marine euryarchaeote

Query: 5 HWREVC 10
HW +VC
Sbjct: 425 HWGKVC 430


>sp|GCS2_NATPD|GLUTAMATE--CYSTEINE ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SGAEHWREVC 10
SGA H RE+
Sbjct: 274 SGANHRRELL 283


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 EHWREVC 10
E W E+C
Sbjct: 499 EEWCEIC 505


>sp|MPTA_AERPE|GTP cyclohydrolase MptA|Aeropyrum pernix (strain ATCC 700893

Query: 1 SGAEHWR 7
SG E WR
Sbjct: 130 SGGERWR 136




83|Sequence|411|420|WREVCESPRK

>sp|NOB1_METJA|ENDORIBONUCLEASE Nob1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WREVCESPRK 10
WR++CE +K
Sbjct: 154 WRKICEGCKK 163


>sp|FPOM_METMA|F(420)H(2) dehydrogenase subunit M|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WREVCESPRK 10
W+E ESP +
Sbjct: 100 WKEEMESPNR 109


>sp|DNLI_METJA|DNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WREVCE 6
WR+VCE
Sbjct: 3 WRDVCE 8


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 WREVCESPR 9
WRE +SPR
Sbjct: 150 WREGTDSPR 158


>sp|THIL_METHJ|THIAMINE-MONOPHOSPHATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 WREVCE-SPR 9
W+++CE PR
Sbjct: 165 WKDLCEPQPR 174


>sp|PDXS_PYRCJ|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum calidifontis (strain

Query: 2 REVCESPRK 10
RE+CE+ R+
Sbjct: 168 RELCEALRR 176


>sp|PDXS_PYRAE|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum aerophilum (strain

Query: 2 REVCESPRK 10
RE+CE+ R+
Sbjct: 170 RELCEALRR 178


>sp|SYT_NATPD|THREONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 WREVCESP 8
W+++C+ P
Sbjct: 177 WQDLCQGP 184


>sp|PDXS_PYRAR|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum arsenaticum (strain

Query: 2 REVCESPRK 10
RE+CE+ R+
Sbjct: 171 RELCEALRR 179


>sp|METAA_METII|HOMOSERINE O-acetyltransferase|Methanomassiliicoccus intestinalis (strain

Query: 1 WREVCE 6
W+E CE
Sbjct: 121 WKEFCE 126


>sp|PURP_PYRAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum arsenaticum (strain DSM

Query: 1 WREVCESP 8
WR+ E+P
Sbjct: 93 WRQALEAP 100


>sp|OGT_METMA|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WREVCESP 8
W+ +CE P
Sbjct: 81 WKALCEIP 88


>sp|OGT_METBF|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 WREVCESP 8
W+ +CE P
Sbjct: 81 WKALCEIP 88


>sp|HMC1_METBA|CHROMOSOMAL protein MC1|Methanosarcina barkeri

Query: 1 WREVCESPR 9
W+E+ E+P+
Sbjct: 61 WKEMVEAPK 69


>sp|PURP_PYRAE|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum aerophilum (strain ATCC

Query: 1 WREVCESP 8
WR+ E+P
Sbjct: 99 WRQALEAP 106


>sp|PURP_PYRCJ|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum calidifontis (strain DSM

Query: 1 WREVCESP 8
WR+ E+P
Sbjct: 91 WRQALEAP 98


>sp|Y1185_METJA|UNCHARACTERIZED protein MJ1185|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WREVCESPRK 10
+RE+CE +K
Sbjct: 553 YREICEYNKK 562


>sp|PURP_PYRIL|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum islandicum (strain DSM

Query: 1 WREVCESP 8
WR+ E+P
Sbjct: 92 WRQALEAP 99


>sp|PURP_PYRNV|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum neutrophilum (strain DSM

Query: 1 WREVCESP 8
WR+ E+P
Sbjct: 103 WRQALEAP 110


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 3 EVCESPRK 10
EVCE P +
Sbjct: 587 EVCEKPNE 594


>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 3 EVCESPRK 10
E+C +PRK
Sbjct: 427 ELCLNPRK 434


>sp|DPS_SACS2|DNA protection during starvation protein|Saccharolobus solfataricus

Query: 1 WREVCE 6
W+EVC+
Sbjct: 131 WKEVCD 136


>sp|SYE_METTM|GLUTAMATE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 WREVCESP 8
WRE+ E P
Sbjct: 221 WREMFEMP 228




84|Sequence|416|425|ESPRKPVAKW

>sp|Y778_AERPE|PUTATIVE HTH-type transcriptional regulatory protein|Aeropyrum pernix

Query: 2 SPRKPVAK 9
SPRKPV+K
Sbjct: 202 SPRKPVSK 209


>sp|TATCT_HALVD|SEC-INDEPENDENT protein translocase protein TatCt|Haloferax volcanii (strain ATCC

Query: 3 PRKPVAKW 10
P+ PVA W
Sbjct: 118 PKSPVAPW 125


>sp|DAPH_METKA|2,3,4,5-TETRAHYDROPYRIDINE-2,6-DICARBOXYLATE N-acetyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 ESPRKPVAKW 10
ESP++ +AK+
Sbjct: 18 ESPKRTIAKF 27


>sp|RS4_IGNH4|SMALL ribosomal subunit protein uS4|Ignicoccus hospitalis (strain

Query: 2 SPRKPVAKW 10
PRKP KW
Sbjct: 3 DPRKPRKKW 11


>sp|RS4_AERPE|SMALL ribosomal subunit protein uS4|Aeropyrum pernix (strain ATCC

Query: 2 SPRKPVAKW 10
PRKP KW
Sbjct: 3 DPRKPRKKW 11


>sp|TRM56_THEPD|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermofilum pendens (strain

Query: 3 PRKPVAKW 10
PR+ VA W
Sbjct: 71 PRETVANW 78


>sp|ARCC_THEVO|CARBAMATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 SPRKPVAKW 10
SP KP+ ++
Sbjct: 121 SPEKPIGRY 129


>sp|SYR_PYRAE|ARGININE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 SPRKPVA-KW 10
SPRKP+ KW
Sbjct: 494 SPRKPIEFKW 503


>sp|SYR_PYRIL|ARGININE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 SPRKPVA-KW 10
SPRKP+ KW
Sbjct: 494 SPRKPIEFKW 503


>sp|Y1052_THEAC|UNCHARACTERIZED solute-binding protein Ta1052|Thermoplasma acidophilum (strain

Query: 1 ESPRKPVA 8
E+P KPVA
Sbjct: 2 ENPIKPVA 9


>sp|SYR_PYRAR|ARGININE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 SPRKPV 7
SPRKP+
Sbjct: 494 SPRKPI 499


>sp|IF2G_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain ATCC

Query: 4 RKPVAKW 10
R+PVA W
Sbjct: 383 RRPVAVW 389


>sp|IDH_CALNO|ISOCITRATE dehydrogenase [NADP]|Caldococcus noboribetus

Query: 5 KPVAKW 10
KP++KW
Sbjct: 199 KPISKW 204




85|Sequence|421|431|PVAKWHSLSEY

>sp|LIPA_AERPE|LIPOYL synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PVAKWHSLSEY 11
PVAK +SLSE+
Sbjct: 236 PVAKRYSLSEF 246


>sp|DPOL_METVO|DNA polymerase|Methanococcus voltae

Query: 1 PVAKWHS 7
P+A+W+S
Sbjct: 539 PMARWYS 545


>sp|THII_HALSA|PROBABLE tRNA sulfurtransferase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PVAKWHSL 8
PVA W S+
Sbjct: 195 PVAAWESM 202


>sp|THII_HALS3|PROBABLE tRNA sulfurtransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 PVAKWHSL 8
PVA W S+
Sbjct: 195 PVAAWESM 202


>sp|TRPG_HALSA|ANTHRANILATE synthase component 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 PVAKWHSL 8
P A++HSL
Sbjct: 131 PAARYHSL 138


>sp|Y706_METBF|UPF0288 protein Mbar_A0706|Methanosarcina barkeri (strain Fusaro /

Query: 1 PVAKWHSLSE 10
P+ +W +SE
Sbjct: 183 PIIEWEQISE 192


>sp|DPOL3_SACS2|DNA polymerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 KWHSLSEY 11
KW+ +S Y
Sbjct: 314 KWYEISRY 321


>sp|GCS2_HALLT|GLUTAMATE--CYSTEINE ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PVAKWHSL 8
P AKW L
Sbjct: 102 PAAKWREL 109


>sp|GCS2_HALMA|GLUTAMATE--CYSTEINE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PVAKWHSL 8
P+AKW L
Sbjct: 103 PLAKWREL 110


>sp|GLMM_METJA|PHOSPHOGLUCOSAMINE mutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KWHSLSE 10
+WHS+ E
Sbjct: 129 EWHSVGE 135


>sp|GCS2_HALVD|GLUTAMATE--CYSTEINE ligase|Haloferax volcanii (strain ATCC 29605

Query: 1 PVAKWHSL 8
P AKW L
Sbjct: 102 PAAKWREL 109


>sp|Y3526_METJA|UNCHARACTERIZED ATP-binding protein MJECL26|Methanocaldococcus jannaschii (strain

Query: 2 VAKWHSLSE 10
+ +WH++ E
Sbjct: 329 IIEWHAIKE 337


>sp|Y1616_ARCFU|UNCHARACTERIZED protein AF_1616|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VAKWHSLSE 10
VAK HSL E
Sbjct: 22 VAKGHSLDE 30






THE END