1|Sequence|1|10|MAFSKGFRIY
>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)
Query: 4 SKGFRIY 10
+KGF+IY
Sbjct: 383 TKGFKIY 389
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 MAFSKGFRIY 10
+A GFR++
Sbjct: 208 LALGAGFRVF 217
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 MAFSKGFRIY 10
+A GFR++
Sbjct: 208 LALGAGFRVF 217
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 MAFSKGFRIY 10
+A GFR++
Sbjct: 208 LALGAGFRVF 217
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 MAFSKGFRIY 10
+A GFR++
Sbjct: 208 LALGAGFRVF 217
>sp|VL2_HPV10|MINOR capsid protein L2|Human papillomavirus type 10
Query: 1 MAFSKGFR 8
+AF++G+R
Sbjct: 362 VAFTEGYR 369
2|Sequence|6|15|GFRIYHKLDP
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 483 FKIYHKCD 490
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 467 FKIYHKCD 474
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 483 FKIYHKCD 490
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 483 FKIYHKCD 490
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 467 FKIYHKCD 474
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 483 FKIYHKCD 490
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 467 FKIYHKCD 474
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 467 FKIYHKCD 474
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 483 FKIYHKCD 490
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 483 FKIYHKCD 490
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 483 FKIYHKCD 490
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 483 FKIYHKCD 490
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 483 FKIYHKCD 490
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 483 FKIYHKCD 490
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 484 FKIYHKCD 491
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 467 FKIYHKCD 474
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 483 FKIYHKCD 490
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 483 FKIYHKCD 490
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 483 FKIYHKCD 490
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 483 FKIYHKCD 490
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 483 FKIYHKCD 490
>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 482 FKIYHKCD 489
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 483 FKIYHKCD 490
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 483 FKIYHKCD 490
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 483 FKIYHKCD 490
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 483 FKIYHKCD 490
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 2 FRIYHKLD 9
F+IYHK D
Sbjct: 483 FKIYHKCD 490
>sp|VB05_VACC8|TRUNCATED plaque-size/host range protein|Vaccinia virus (strain LC16m8)
Query: 5 YHKLDP 10
YH LDP
Sbjct: 52 YHSLDP 57
>sp|PG190_VACC0|PROTEIN OPG190|Vaccinia virus (strain LC16m0) (VACV)
Query: 5 YHKLDP 10
YH LDP
Sbjct: 52 YHSLDP 57
>sp|PG190_MONPV|PROTEIN OPG190|Monkeypox virus (MPXV)
Query: 5 YHKLDP 10
YH LDP
Sbjct: 52 YHSLDP 57
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GFRIYHKLDP 10
F YH DP
Sbjct: 1631 AFEYYHTTDP 1640
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GFRIYHKLDP 10
F YH DP
Sbjct: 1631 AFEYYHTTDP 1640
>sp|SHUT_VZVD|VIRION host shutoff protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 RIYHKL 8
R+YHKL
Sbjct: 193 RLYHKL 198
>sp|X_HBVA3|PROTEIN X|Hepatitis B virus genotype A2
Query: 3 RIYHKLDP 10
R+Y +LDP
Sbjct: 4 RLYCQLDP 11
>sp|X_HBVA2|PROTEIN X|Hepatitis B virus genotype A2
Query: 3 RIYHKLDP 10
R+Y +LDP
Sbjct: 4 RLYCQLDP 11
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 RIYHK 7
RIYHK
Sbjct: 814 RIYHK 818
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 3 RIYHKLD 9
R++H+LD
Sbjct: 570 RLWHQLD 576
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 3 RIYHKLD 9
R++H+LD
Sbjct: 575 RLWHQLD 581
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 RIYHK 7
RIYHK
Sbjct: 801 RIYHK 805
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 RIYHK 7
RIYHK
Sbjct: 803 RIYHK 807
>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)
Query: 2 FRIYHKLDP 10
F IY +DP
Sbjct: 171 FTIYQIVDP 179
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 1 GFRIYHKLD 9
GFR KLD
Sbjct: 536 GFRKQKKLD 544
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 1 GFRIYHKLD 9
GFR KLD
Sbjct: 536 GFRKQKKLD 544
3|Sequence|11|20|HKLDPPPFSL
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 3 LDPPPFSL 10
L PPPFS+
Sbjct: 146 LSPPPFSV 153
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 1 HKLDPPPFS 9
L PPPF+
Sbjct: 48 QSLSPPPFN 56
>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 KLDPPPFSL 10
KLDPP F L
Sbjct: 49 KLDPPTFKL 57
>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 KLDPPPFSL 10
KLDPP F L
Sbjct: 49 KLDPPTFKL 57
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HKLDPPPFS 9
L PPPF+
Sbjct: 48 QSLSPPPFN 56
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 HKLDPPPFS 9
L PPPF+
Sbjct: 48 QSLSPPPFN 56
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 LDPPPFSL 10
+D PPFS+
Sbjct: 431 VDEPPFSI 438
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 LDPPPFSL 10
+D PPFS+
Sbjct: 431 VDEPPFSI 438
>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 LDPPPFSL 10
+D PPFS+
Sbjct: 431 VDEPPFSI 438
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 1 HKLDPPPFS 9
L PPPF+
Sbjct: 48 QSLAPPPFN 56
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 HKLDPPPFS 9
L PPPF+
Sbjct: 48 QSLAPPPFN 56
>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 1 HKLDPPPFSL 10
HK++ PFS
Sbjct: 165 HKINQTPFSF 174
>sp|NSP1_ROTHD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 1 HKLDPPPFSL 10
HK++ PFS
Sbjct: 165 HKINQTPFSF 174
>sp|NSP1_ROTH6|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 1 HKLDPPPFSL 10
HK++ PFS
Sbjct: 165 HKINQTPFSF 174
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 2 KLDPPP 7
++DPPP
Sbjct: 238 RVDPPP 243
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 5 PPPFS 9
PPPF+
Sbjct: 338 PPPFN 342
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 5 PPPFS 9
PPPF+
Sbjct: 339 PPPFN 343
>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 2 KLDPPP 7
K DPPP
Sbjct: 11 KRDPPP 16
>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 2 KLDPPP 7
K DPPP
Sbjct: 11 KRDPPP 16
>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)
Query: 2 KLDPPP 7
K DPPP
Sbjct: 11 KRDPPP 16
>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 KLDPPP 7
K DPPP
Sbjct: 11 KRDPPP 16
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 2 KLDPPP 7
K DPPP
Sbjct: 11 KRDPPP 16
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 2 KLDPPP 7
K DPPP
Sbjct: 11 KRDPPP 16
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 5 PPPFS 9
PPPF+
Sbjct: 339 PPPFN 343
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 5 PPPFS 9
PPPF+
Sbjct: 339 PPPFN 343
>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 LDPPPFS 9
L PPP+S
Sbjct: 96 LPPPPYS 102
>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 LDPPPFS 9
L PPP+S
Sbjct: 96 LPPPPYS 102
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 5 PPPFS 9
PPPF+
Sbjct: 339 PPPFN 343
>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus
Query: 5 PPPFS 9
PPPF+
Sbjct: 324 PPPFT 328
>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)
Query: 5 PPPFS 9
PPPF+
Sbjct: 341 PPPFN 345
>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)
Query: 1 HKLDPP 6
H+LDPP
Sbjct: 236 HQLDPP 241
>sp|LMP2_EBVB9|LATENT membrane protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 LDPPPFS 9
L PPP+S
Sbjct: 96 LPPPPYS 102
>sp|GL_HCMV7|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5160) (HHV-5)
Query: 1 HKLDPP 6
H+LDPP
Sbjct: 236 HQLDPP 241
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 5 PPPFS 9
PPPF+
Sbjct: 339 PPPFN 343
>sp|GL_HCMV2|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 1042) (HHV-5)
Query: 1 HKLDPP 6
H+LDPP
Sbjct: 236 HQLDPP 241
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 LDPPPFSL 10
++ PPFS+
Sbjct: 431 VEEPPFSI 438
>sp|GL_HCMV4|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 4654) (HHV-5)
Query: 1 HKLDPP 6
H+LDPP
Sbjct: 236 HQLDPP 241
>sp|GL_HCMVP|ENVELOPE glycoprotein L|Human cytomegalovirus (strain PT) (HHV-5)
Query: 1 HKLDPP 6
H+LDPP
Sbjct: 236 HQLDPP 241
>sp|GL_HCMVM|ENVELOPE glycoprotein L|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HKLDPP 6
H+LDPP
Sbjct: 236 HQLDPP 241
>sp|GL_HCMV8|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5508) (HHV-5)
Query: 1 HKLDPP 6
H+LDPP
Sbjct: 236 HQLDPP 241
>sp|GL_HCMV5|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5035) (HHV-5)
Query: 1 HKLDPP 6
H+LDPP
Sbjct: 236 HQLDPP 241
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 5 PPPFS 9
PPPF+
Sbjct: 340 PPPFN 344
Query: 4 DPPPFS 9
+PPP S
Sbjct: 500 EPPPIS 505
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 LDPPPFSL 10
++ PPFS+
Sbjct: 431 VEEPPFSI 438
>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40
Query: 1 HKLDPP 6
H+L PP
Sbjct: 18 HRLPPP 23
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 LDPPPFSL 10
++ PPFS+
Sbjct: 431 VEEPPFSI 438
>sp|GL_HCMV6|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5040) (HHV-5)
Query: 1 HKLDPP 6
H+LDPP
Sbjct: 236 HQLDPP 241
>sp|GL_HCMV3|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 2387) (HHV-5)
Query: 1 HKLDPP 6
H+LDPP
Sbjct: 236 HQLDPP 241
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 DPPP 7
DPPP
Sbjct: 606 DPPP 609
>sp|GL_HCMVA|ENVELOPE glycoprotein L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HKLDPP 6
H+LDPP
Sbjct: 236 HQLDPP 241
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 DPPP 7
DPPP
Sbjct: 606 DPPP 609
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 DPPP 7
DPPP
Sbjct: 606 DPPP 609
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 LDPPP 7
+DPPP
Sbjct: 827 MDPPP 831
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 LDPPPFSL 10
++ PPFS+
Sbjct: 432 VEDPPFSI 439
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 HKLDPPPFS 9
K++P P+S
Sbjct: 804 QKIEPQPYS 812
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 3 LDPPP 7
+DPPP
Sbjct: 827 MDPPP 831
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 LDPPP 7
+DPPP
Sbjct: 827 MDPPP 831
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 3 LDPPP 7
+DPPP
Sbjct: 827 MDPPP 831
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 3 LDPPP 7
+DPPP
Sbjct: 827 MDPPP 831
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 3 LDPPP 7
+DPPP
Sbjct: 827 MDPPP 831
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 3 LDPPP 7
+DPPP
Sbjct: 827 MDPPP 831
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 3 LDPPP 7
+DPPP
Sbjct: 827 MDPPP 831
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 3 LDPPP 7
+DPPP
Sbjct: 827 MDPPP 831
>sp|X_HBVA9|PROTEIN X|Hepatitis B virus genotype A3
Query: 1 HKLDPPPFS 9
HKL PFS
Sbjct: 139 HKLVCAPFS 147
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 4 DPPPFSL 10
DP P SL
Sbjct: 1410 DPEPLSL 1416
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 4 DPPPFSL 10
DPPP S+
Sbjct: 291 DPPPSSV 297
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 4 DPPPFSL 10
DP P SL
Sbjct: 1410 DPEPLSL 1416
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 4 DPPPFSL 10
DP P SL
Sbjct: 1410 DPEPLSL 1416
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 HKLDPPPFS 9
K DP P+S
Sbjct: 803 QKNDPQPYS 811
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 1 HKLDPPPF 8
KLDPP +
Sbjct: 84 QKLDPPKW 91
>sp|US19_HCMVT|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 DPPPFS 9
DPPP S
Sbjct: 64 DPPPLS 69
>sp|US19_HCMVA|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 DPPPFS 9
DPPP S
Sbjct: 64 DPPPLS 69
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 4 DPPPFSL 10
DPPP S+
Sbjct: 283 DPPPSSV 289
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 4 DPPPFSL 10
DPPP +L
Sbjct: 735 DPPPENL 741
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 4 DPPPFSL 10
DPPP S+
Sbjct: 282 DPPPSSV 288
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 HKLDPPPFS 9
K++P P+S
Sbjct: 804 QKIEPQPYS 812
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 PPPFS 9
PPPF+
Sbjct: 193 PPPFT 197
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 PPPFS 9
PPPF+
Sbjct: 193 PPPFT 197
>sp|VP40_MABVM|MATRIX protein VP40|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 LDPPPFS 9
L+PPP++
Sbjct: 14 LNPPPYA 20
>sp|VP40_MABVA|MATRIX protein VP40|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 LDPPPFS 9
L+PPP++
Sbjct: 14 LNPPPYA 20
4|Sequence|16|25|PPFSLIVETR
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 2 PFSLIVET 9
PFS IVET
Sbjct: 252 PFSKIVET 259
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 2 PFSLIVET 9
PFS IVET
Sbjct: 252 PFSKIVET 259
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 2 PFSLIVET 9
PFS IVET
Sbjct: 252 PFSKIVET 259
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PFSLIVET 9
PF LI+E+
Sbjct: 1336 PFQLIIES 1343
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 2 PFSLIVET 9
PF L+V T
Sbjct: 284 PFRLVVST 291
5|Sequence|21|30|IVETRHKEEC
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 TRHKEEC 10
TRH E+C
Sbjct: 1175 TRHTEKC 1181
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 4 TRHKEEC 10
TRH E+C
Sbjct: 1190 TRHTEKC 1196
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 4 TRHKEEC 10
TRH E+C
Sbjct: 1173 TRHTEKC 1179
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 TRHKEEC 10
TRH E+C
Sbjct: 1175 TRHTEKC 1181
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 TRHKEEC 10
TRH E+C
Sbjct: 1175 TRHTEKC 1181
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 4 TRHKEEC 10
TRH E+C
Sbjct: 1190 TRHTEKC 1196
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 4 TRHKEEC 10
TRH E+C
Sbjct: 1189 TRHTEKC 1195
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 IVETRHKEEC 10
IVE H+E+C
Sbjct: 1928 IVEEVHEEKC 1937
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 IVETRHKEEC 10
IVE H+E+C
Sbjct: 1928 IVEEVHEEKC 1937
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 IVETRHKEEC 10
IVE H+E+C
Sbjct: 1929 IVEEVHEEKC 1938
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 IVETRH 6
+VETRH
Sbjct: 636 VVETRH 641
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 4 TRHKEEC 10
TRH+ EC
Sbjct: 124 TRHRPEC 130
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 4 TRHKEEC 10
TRH+ EC
Sbjct: 125 TRHRPEC 131
>sp|VU8_HHV7J|PROTEIN U8|Human herpesvirus 7 (strain JI)
Query: 1 IVETRHKEEC 10
++ RH+ EC
Sbjct: 42 LLTERHRNEC 51
>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980
Query: 5 RHKEEC 10
RH EEC
Sbjct: 272 RHIEEC 277
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 5 RHKEEC 10
RH EEC
Sbjct: 273 RHIEEC 278
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 IVETRH 6
++ETRH
Sbjct: 640 VIETRH 645
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 5 RHKEEC 10
+HK EC
Sbjct: 231 KHKHEC 236
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 5 RHKEEC 10
+HK EC
Sbjct: 161 KHKHEC 166
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 4 TRHKEEC 10
TRH + C
Sbjct: 586 TRHMDRC 592
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 2 VETRHKEEC 10
+ T+H E C
Sbjct: 1025 INTKHDEHC 1033
6|Sequence|26|35|HKEECLMFES
>sp|MATRX_MEASB|MATRIX protein|Measles virus (strain Biken) (MeV)
Query: 2 KEECLMFES 10
K+ECLM+ S
Sbjct: 46 KDECLMYMS 54
>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)
Query: 4 ECLMFES 10
+CLMF+S
Sbjct: 527 DCLMFQS 533
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 4 ECLMFES 10
+CLMF+S
Sbjct: 527 DCLMFQS 533
>sp|MATRX_MEASA|MATRIX protein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 KEECLMFES 10
K+EC M+ S
Sbjct: 46 KDECFMYMS 54
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 HKEECLMFES 10
H E+C++ +S
Sbjct: 1175 HTEKCVILDS 1184
>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 4 ECLMFES 10
+C+MF+S
Sbjct: 529 DCIMFQS 535
>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)
Query: 4 ECLMFES 10
+C+MF+S
Sbjct: 525 DCIMFQS 531
>sp|MATRX_MEASU|MATRIX protein|Measles virus (strain Hu2) (MeV)
Query: 2 KEECLMF 8
K+EC M+
Sbjct: 46 KDECFMY 52
>sp|MATRX_MEASI|MATRIX protein|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 KEECLMF 8
K+EC M+
Sbjct: 46 KDECFMY 52
>sp|MATRX_MEASE|MATRIX protein|Measles virus (strain Edmonston) (MeV)
Query: 2 KEECLMF 8
K+EC M+
Sbjct: 46 KDECFMY 52
>sp|MATRX_MEASC|MATRIX protein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 KEECLMF 8
K+EC M+
Sbjct: 46 KDECFMY 52
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 ECLMFES 10
EC +FES
Sbjct: 49 ECTLFES 55
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 4 ECLMFES 10
EC +FES
Sbjct: 49 ECTLFES 55
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 4 ECLMFES 10
EC +FES
Sbjct: 49 ECTLFES 55
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 ECLMFES 10
EC +FES
Sbjct: 49 ECTLFES 55
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 4 ECLMFES 10
+C++FES
Sbjct: 522 DCIIFES 528
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 4 ECLMFES 10
+C++FES
Sbjct: 522 DCIIFES 528
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 HKEECLMF 8
H++ C+M+
Sbjct: 137 HRDICIMY 144
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 HKEECLMFES 10
H E+C++ ++
Sbjct: 1192 HTEKCVILDA 1201
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 HKEECLMFES 10
H E+C++ ++
Sbjct: 1192 HTEKCVILDA 1201
>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 4 ECLMFES 10
+C+MF++
Sbjct: 533 DCIMFDA 539
>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)
Query: 4 ECLMFES 10
+C+MF++
Sbjct: 534 DCIMFDA 540
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 HKEECLMFES 10
H E+C++ ++
Sbjct: 1177 HTEKCVIIDA 1186
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 HKEECLMFES 10
H E+C++ ++
Sbjct: 1177 HTEKCVIIDA 1186
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 HKEECLMFES 10
H E+C++ ++
Sbjct: 1177 HTEKCVIIDA 1186
>sp|MATRX_MEASH|MATRIX protein|Measles virus (strain Halle) (MeV)
Query: 2 KEECLMF 8
K+EC M+
Sbjct: 46 KDECSMY 52
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 1 HKEEC 5
HK EC
Sbjct: 232 HKHEC 236
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 2 KEECLMF 8
K+ CL+F
Sbjct: 425 KQNCLLF 431
7|Sequence|31|40|LMFESGAVAV
>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5
Query: 1 LMFESGAVAV 10
LMF++ A+A+
Sbjct: 329 LMFDATAIAI 338
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 3 FESGAVA 9
F+SGAVA
Sbjct: 175 FKSGAVA 181
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 2 MFESGAVAV 10
+FE GA+++
Sbjct: 746 IFERGAISI 754
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 2 MFESGAVAV 10
+FE GA+++
Sbjct: 746 IFERGAISI 754
>sp|SPIKE_ADE04|FIBER protein|Human adenovirus E serotype 4
Query: 1 LMFESGAVA 9
+ FE GA+A
Sbjct: 189 IKFEDGAIA 197
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 MFESGAVAV 10
++++GA+AV
Sbjct: 2483 LWDNGAIAV 2491
8|Sequence|36|45|GAVAVLSSAE
***** No hits found ******
9|Sequence|41|50|LSSAEKEAIK
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 SSAEKEAIK 10
SSA KEAI+
Sbjct: 1211 SSALKEAIE 1219
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 SSAEKEAIK 10
SSA KEAI+
Sbjct: 1211 SSALKEAIE 1219
10|Sequence|46|55|KEAIKGTYSK
>sp|OX2V_HHV6Z|PUTATIVE OX-2 membrane glycoprotein homolog|Human herpesvirus 6B (strain
Query: 1 KEAIKGTYS 9
KEA+KG+ S
Sbjct: 251 KEAVKGSNS 259
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 KEAIKGTYSK 10
KE++KG + K
Sbjct: 1521 KESLKGFWKK 1530
Query: 2 EAIKGTYSK 10
E I+G Y K
Sbjct: 1109 ELIRGAYPK 1117
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 KEAIKGTYSK 10
KE++KG + K
Sbjct: 1521 KESLKGFWKK 1530
Query: 2 EAIKGTYSK 10
E I+G Y K
Sbjct: 1109 ELIRGAYPK 1117
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 2 EAIKGTYSK 10
E I+G Y K
Sbjct: 1108 ELIRGAYPK 1116
11|Sequence|51|60|GTYSKVLDAY
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 GTYSKVLDAY 10
G ++KVLD+Y
Sbjct: 1565 GVHTKVLDSY 1574
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 GTYSKVLDAY 10
G ++KVLD+Y
Sbjct: 1565 GIHTKVLDSY 1574
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 GTYSKVLDAY 10
G ++KVLD+Y
Sbjct: 1561 GIHTKVLDSY 1570
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 TYSKVLDAY 10
TY VLD Y
Sbjct: 22 TYHTVLDCY 30
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 GTYSKVLDAY 10
G +KV+D+Y
Sbjct: 1558 GITTKVIDSY 1567
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 TYSKVL 7
TYSKVL
Sbjct: 153 TYSKVL 158
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 2 TYSKVL 7
TYSKVL
Sbjct: 153 TYSKVL 158
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 2 TYSKVL 7
TYSKVL
Sbjct: 153 TYSKVL 158
>sp|VL2_HPV54|MINOR capsid protein L2|Human papillomavirus type 54
Query: 1 GTYSKVLDAY 10
G YS + D Y
Sbjct: 352 GLYSDIYDVY 361
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 3 YSKVLDAY 10
Y K+LD Y
Sbjct: 2157 YIKILDPY 2164
>sp|U79_HHV7J|PROTEIN U79|Human herpesvirus 7 (strain JI)
Query: 1 GTYSKVLDAY 10
GT+ V AY
Sbjct: 9 GTFESVTQAY 18
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 GTYSKVLD 8
GTY V+D
Sbjct: 463 GTYKIVID 470
12|Sequence|56|65|VLDAYGLLGV
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 DAYGLLG 9
D+YGLLG
Sbjct: 217 DSYGLLG 223
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 DAYGLLG 9
D+YGLLG
Sbjct: 217 DSYGLLG 223
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 VLDAYGL 7
+LDAYG+
Sbjct: 1889 LLDAYGI 1895
>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)
Query: 1 VLDAYGLL 8
+LD YGL+
Sbjct: 186 ILDNYGLV 193
>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 VLDAYGLL 8
+LD YGL+
Sbjct: 186 ILDNYGLV 193
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 1 VLDAYGLL 8
+LD YGL+
Sbjct: 186 ILDNYGLV 193
>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann
Query: 1 VLDAYGLL 8
+LD YGL+
Sbjct: 186 ILDNYGLV 193
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 3 DAYGLLG 9
D YG+LG
Sbjct: 625 DLYGILG 631
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 VLDAYGLLG 9
V+D GLLG
Sbjct: 241 VIDEAGLLG 249
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VLDAYGLLG 9
V+D GLLG
Sbjct: 241 VIDEAGLLG 249
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 1 VLDAYGLLG 9
V+D GLLG
Sbjct: 246 VIDEAGLLG 254
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 1 VLDAYGLLG 9
V+D GLLG
Sbjct: 247 VIDEAGLLG 255
>sp|YVDH_VACCC|UNCHARACTERIZED 7.2 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 DAYGLLGV 10
DAY LG+
Sbjct: 7 DAYSTLGI 14
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 VLDAYGLL 8
+LDA GLL
Sbjct: 1198 ILDAPGLL 1205
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 VLDAYGLL 8
+LDA GLL
Sbjct: 1198 ILDAPGLL 1205
>sp|VE4_HPV63|PROTEIN E4|Human papillomavirus type 63
Query: 5 YGLLGV 10
YGLLG+
Sbjct: 8 YGLLGL 13
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VLDAYGLLGV 10
V D Y LG+
Sbjct: 539 VTDVYATLGI 548
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VLDAYGLLGV 10
V D Y LG+
Sbjct: 539 VTDVYATLGI 548
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VLDAYGLLGV 10
V D Y LG+
Sbjct: 539 VTDVYATLGI 548
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VLDAYGLLGV 10
+L YG LG+
Sbjct: 452 ILPEYGTLGL 461
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VLDAYGLLGV 10
+L YG LG+
Sbjct: 452 ILPEYGTLGL 461
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VLDAYGLLGV 10
+L YG LG+
Sbjct: 452 ILPEYGTLGL 461
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VLDAYGLLGV 10
+L YG LG+
Sbjct: 452 ILPEYGTLGL 461
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VLDAYGLLGV 10
+L YG LG+
Sbjct: 452 ILPEYGTLGL 461
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 VLDAYGLL 8
+LDAY L
Sbjct: 697 ILDAYNTL 704
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VLDAYGLL 8
+LDAY L
Sbjct: 712 ILDAYNTL 719
13|Sequence|61|70|GLLGVLRLNL
>sp|Y121_ADE02|UNCHARACTERIZED protein F-121|Human adenovirus C serotype 2
Query: 4 GVLRLN 9
GVLRLN
Sbjct: 64 GVLRLN 69
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 4 GVLRLNL 10
GVL+LNL
Sbjct: 63 GVLKLNL 69
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 GLLGVLRLN 9
GL+GVL L+
Sbjct: 4578 GLVGVLTLD 4586
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 GLLGVLRLN 9
GL+GVL L+
Sbjct: 4569 GLVGVLTLD 4577
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 GLLGVLRLN 9
GL+GVL L+
Sbjct: 4607 GLVGVLTLD 4615
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 GLLGVLRLN 9
GL+GVL L+
Sbjct: 4627 GLVGVLTLD 4635
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 GLLGVLRLN 9
GL+GVL L+
Sbjct: 4657 GLVGVLTLD 4665
14|Sequence|66|75|LRLNLGDTML
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 3 LNLGDTML 10
LNL DT+L
Sbjct: 372 LNLADTLL 379
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 LGDTML 10
LGDTML
Sbjct: 1186 LGDTML 1191
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RLNLGDTML 10
+LN G TML
Sbjct: 228 KLNQGATML 236
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 1 LRLNLGDT 8
L +NLGD+
Sbjct: 427 LEVNLGDS 434
>sp|GO_HHV6Z|130 kDa Glycoprotein O|Human herpesvirus 6B (strain Z29)
Query: 1 LRLNLGDTM 9
++++LG+TM
Sbjct: 451 IKISLGETM 459
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 LNLGDTML 10
LNLG+T +
Sbjct: 703 LNLGETFV 710
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 LNLGDTML 10
LNLG+T +
Sbjct: 703 LNLGETFV 710
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 LRLNLGD 7
L +NLGD
Sbjct: 427 LEVNLGD 433
15|Sequence|71|80|GDTMLHYLVL
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 1 GDTMLHYLVL 10
GD +HYL L
Sbjct: 146 GDVDIHYLSL 155
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 1 GDTMLHYLV 9
GDT L Y+V
Sbjct: 357 GDTELKYIV 365
>sp|CAPSD_HBVH3|CAPSID protein|Hepatitis B virus genotype H
Query: 2 DTMLHYLV 9
DT+L YLV
Sbjct: 113 DTVLEYLV 120
>sp|HBEAG_HBVH3|EXTERNAL core antigen|Hepatitis B virus genotype H
Query: 2 DTMLHYLV 9
DT+L YLV
Sbjct: 142 DTVLEYLV 149
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 1 GDTMLHYLVL 10
GD +HY L
Sbjct: 147 GDVDIHYTAL 156
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 GDTMLHYLVL 10
GD +HY L
Sbjct: 148 GDVDIHYTAL 157
>sp|PG040_VACCA|SUPERINFECTION exclusion protein|Vaccinia virus (strain Ankara) (VACV)
Query: 1 GDTMLHY 7
GD M H+
Sbjct: 236 GDNMTHF 242
>sp|PG040_VACCC|SUPERINFECTION exclusion protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GDTMLHY 7
GD M H+
Sbjct: 236 GDNMTHF 242
>sp|PG040_VAR67|SUPERINFECTION exclusion protein|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 GDTMLHY 7
GD M H+
Sbjct: 240 GDNMTHF 246
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 1 GDTMLHYLVL 10
GD +HY L
Sbjct: 148 GDVDIHYTSL 157
16|Sequence|76|85|HYLVLVTGCM
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 HYLVLVTGC 9
H+++LV+GC
Sbjct: 1169 HHVLLVSGC 1177
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 YLVLVTGCM 10
YLVL+ C+
Sbjct: 601 YLVLLEACL 609
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 LVLVTGCM 10
LVL+T C+
Sbjct: 115 LVLLTACL 122
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 HYLVLVTG 8
H+++LV+G
Sbjct: 1169 HHMLLVSG 1176
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 HYLVLVTG 8
H+++LV+G
Sbjct: 1169 HHMLLVSG 1176
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 HYLVLVTG 8
H+++LV+G
Sbjct: 1169 HHMLLVSG 1176
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 HYLVLVTGC 9
H L L TGC
Sbjct: 3409 HQLELSTGC 3417
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 HYLVLVTGC 9
H L L TGC
Sbjct: 3409 HQLELSTGC 3417
>sp|SCAF_HHV2H|CAPSID scaffolding protein|Human herpesvirus 2 (strain HG52)
Query: 1 HYLVLVTG 8
HY LVTG
Sbjct: 335 HYNQLVTG 342
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 HYLVLVTGC 9
H L L TGC
Sbjct: 3497 HQLELSTGC 3505
>sp|PG049_VACCP|PROTEIN OPG049|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 YLVLVTGCM 10
YL+ V GC+
Sbjct: 13 YLLAVCGCI 21
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 HYLVLVTGC 9
H L L TGC
Sbjct: 3497 HQLELSTGC 3505
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 HYLVLVTGC 9
H L L TGC
Sbjct: 3447 HQLELSTGC 3455
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 HYLVLVTGC 9
H L L TGC
Sbjct: 3467 HQLELSTGC 3475
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 HYLVLVTGC 9
H L L TGC
Sbjct: 3467 HQLELSTGC 3475
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 HYLVLVTGC 9
H L L TGC
Sbjct: 3447 HQLELSTGC 3455
>sp|PG049_VACCC|PROTEIN OPG049|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 YLVLVTGCM 10
YL+ V GC+
Sbjct: 13 YLLAVCGCI 21
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 HYLVLVTGCM 10
HY + GC+
Sbjct: 1294 HYHIRCKGCI 1303
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 HYLVLVTGCM 10
HY + GC+
Sbjct: 1294 HYHIRCKGCI 1303
>sp|VE2_HPV31|REGULATORY protein E2|Human papillomavirus 31
Query: 2 YLVLVTGCM 10
YL TGC+
Sbjct: 102 YLTAPTGCL 110
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 1 HYLVLVTGC 9
H++ V GC
Sbjct: 583 HFMGYVIGC 591
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 HYLVLVTG 8
H+++LV+G
Sbjct: 1169 HHVLLVSG 1176
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 1 HYLVLVTGC 9
H++ V GC
Sbjct: 583 HFMGYVIGC 591
>sp|PG049_VAR67|PROTEIN OPG049|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 YLVLVTGCM 10
YL+ V GC+
Sbjct: 13 YLLAVCGCV 21
>sp|VE2_HPV16|REGULATORY protein E2|Human papillomavirus type 16
Query: 2 YLVLVTGCM 10
YL TGC+
Sbjct: 102 YLTAPTGCI 110
17|Sequence|81|90|VTGCMSVGKI
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 2 TGCMSVGK 9
+GC+ VGK
Sbjct: 657 SGCLGVGK 664
>sp|PHOSP_PIV5|PHOSPHOPROTEIN virus 5 (strain W3)
Query: 1 VTGCMSVGK 9
VTG S+GK
Sbjct: 32 VTGTSSLGK 40
>sp|MC148_MCV1|CHEMOKINE-LIKE protein MC148|Molluscum contagiosum virus subtype 1
Query: 3 GCMSVG 8
GC+SVG
Sbjct: 74 GCVSVG 79
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 GCMSVGK 9
GC +GK
Sbjct: 213 GCQDIGK 219
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 GCMSVGK 9
GC +GK
Sbjct: 213 GCQDIGK 219
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 GCMSVGK 9
GC +GK
Sbjct: 213 GCQDIGK 219
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 GCMSVGK 9
GC +GK
Sbjct: 213 GCQDIGK 219
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 GCMSVGK 9
GC +GK
Sbjct: 213 GCQDIGK 219
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 GCMSVGK 9
GC +GK
Sbjct: 213 GCQDIGK 219
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 GCMSVGK 9
GC +GK
Sbjct: 213 GCQDIGK 219
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 TGCMS-VGKI 10
TGC+S +G+I
Sbjct: 1681 TGCISIIGRI 1690
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 TGCMSV 7
TGC+S+
Sbjct: 1681 TGCISI 1686
>sp|V_PIV5|NON-STRUCTURAL protein V|Parainfluenza virus 5 (strain W3)
Query: 1 VTGCMSVGK 9
VTG S+GK
Sbjct: 32 VTGTSSLGK 40
18|Sequence|86|95|SVGKIQESEV
>sp|VB18_VARV|ANKYRIN repeat protein B18|Variola virus
Query: 1 SVGKIQESEV 10
S KIQE+E+
Sbjct: 15 STHKIQENEI 24
>sp|VB18_VAR67|ANKYRIN repeat protein B18|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 SVGKIQESEV 10
S KIQE+E+
Sbjct: 15 STHKIQENEI 24
>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SVGKIQESEV 10
S KIQE+E+
Sbjct: 15 STHKIQENEI 24
>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)
Query: 1 SVGKIQESEV 10
S KIQE+E+
Sbjct: 15 STHKIQENEI 24
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 SVGKIQES 8
++GKIQ+S
Sbjct: 930 AIGKIQDS 937
19|Sequence|91|100|QESEVFRVTS
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 ESEVFR 7
ESEVFR
Sbjct: 462 ESEVFR 467
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 ESEVFR 7
ESE+FR
Sbjct: 459 ESEIFR 464
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 5 VFRVTS 10
VFRVTS
Sbjct: 1170 VFRVTS 1175
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 ESEVFR 7
ESE+FR
Sbjct: 464 ESEIFR 469
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 ESEVFR 7
ESE+FR
Sbjct: 464 ESEIFR 469
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 ESEVFRVTS 10
E +FR+TS
Sbjct: 2161 EFGIFRITS 2169
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 ESEVFRVTS 10
E +FR+TS
Sbjct: 2161 EFGIFRITS 2169
>sp|L_LYCVW|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain WE)
Query: 1 QESEVFRV 8
+ESE FR+
Sbjct: 179 EESEYFRL 186
20|Sequence|96|105|FRVTSTEFIS
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 FRVTSTE 7
FRV++TE
Sbjct: 251 FRVSTTE 257
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 FRVTSTE 7
FRV++TE
Sbjct: 251 FRVSTTE 257
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 FRVTSTE 7
FRV++TE
Sbjct: 251 FRVSTTE 257
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 FRVTSTE 7
FRV++TE
Sbjct: 251 FRVSTTE 257
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 FRVTSTE 7
FRV++TE
Sbjct: 251 FRVSTTE 257
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 FRVTSTE 7
FRV++TE
Sbjct: 251 FRVSTTE 257
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 FRVTSTE 7
FRV++TE
Sbjct: 251 FRVSTTE 257
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 FRVTSTEFIS 10
FR + +EFI+
Sbjct: 410 FRASISEFIA 419
>sp|CAPSD_HCYV5|CAPSID protein|Human associated cyclovirus 1 (isolate
Query: 1 FRVTSTEFIS 10
FRV T F+S
Sbjct: 35 FRVKLTRFVS 44
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 2 RVTSTEFIS 10
+VT+ +FIS
Sbjct: 236 KVTNPDFIS 244
>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82
Query: 2 RVTSTEFIS 10
+VT+ +FIS
Sbjct: 237 KVTNPDFIS 245
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 FRVTSTE 7
FRV++TE
Sbjct: 251 FRVSTTE 257
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 FRVTSTE 7
FRV++TE
Sbjct: 251 FRVSTTE 257
21|Sequence|101|110|TEFISLRIDS
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 3 FISLRID 9
F+SLR+D
Sbjct: 1037 FVSLRVD 1043
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 FISLRID 9
F+SLR+D
Sbjct: 1037 FVSLRVD 1043
>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas)
Query: 1 TEFISLRI 8
T FI+LRI
Sbjct: 53 TAFITLRI 60
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 3 FISLRIDS 10
F SLRID+
Sbjct: 172 FASLRIDA 179
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 3 FISLRID 9
FIS RID
Sbjct: 428 FISQRID 434
>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)
Query: 2 EFISLRI 8
EF+SL+I
Sbjct: 149 EFVSLQI 155
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 FISLRIDS 10
F+SL ID+
Sbjct: 5228 FVSLAIDA 5235
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 FISLRIDS 10
F+SL ID+
Sbjct: 5251 FVSLAIDA 5258
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 FISLRIDS 10
F+SL ID+
Sbjct: 5237 FVSLAIDA 5244
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 FISLRIDS 10
F+SL ID+
Sbjct: 5224 FVSLAIDA 5231
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 FISLRIDS 10
F+SL ID+
Sbjct: 5262 FVSLAIDA 5269
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 FISLRIDS 10
F+SL ID+
Sbjct: 5282 FVSLAIDA 5289
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 FISLRIDS 10
F+SL ID+
Sbjct: 5312 FVSLAIDA 5319
22|Sequence|106|115|LRIDSSDEDR
>sp|VE7_HPV58|PROTEIN E7|Human papillomavirus 58
Query: 4 DSSDED 9
DSSDED
Sbjct: 30 DSSDED 35
>sp|VE7_HPV42|PROTEIN E7|Human papillomavirus 42
Query: 2 RIDSSDED 9
++DSSDED
Sbjct: 30 QLDSSDED 37
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 4 DSSDED 9
DSSDED
Sbjct: 198 DSSDED 203
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 4 DSSDED 9
DSSDED
Sbjct: 198 DSSDED 203
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 3 IDSSDED 9
+DS DED
Sbjct: 387 VDSDDED 393
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 DSSDED 9
DSSDED
Sbjct: 475 DSSDED 480
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 DSSDED 9
DSSDED
Sbjct: 475 DSSDED 480
>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)
Query: 3 IDSSDED 9
+DS DED
Sbjct: 387 VDSDDED 393
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 3 IDSSDED 9
ID+SDE+
Sbjct: 696 IDTSDEE 702
>sp|VE7_HPV33|PROTEIN E7|Human papillomavirus 33
Query: 4 DSSDED 9
DSSDED
Sbjct: 30 DSSDED 35
>sp|VE7_HPV26|PROTEIN E7|Human papillomavirus type 26
Query: 2 RIDSSDED 9
+ DSSDED
Sbjct: 33 QFDSSDED 40
>sp|VE2_HPV61|REGULATORY protein E2|Human papillomavirus type 61
Query: 2 RIDSSDE 8
R+DS+D+
Sbjct: 274 RVDSTDQ 280
>sp|NSP2_ROTHT|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 2 RIDSSDEDR 10
++D D+D+
Sbjct: 34 KVDKKDQDK 42
>sp|NSP2_ROTHD|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 2 RIDSSDEDR 10
++D D+D+
Sbjct: 34 KVDKKDQDK 42
>sp|NSP2_ROTHP|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 2 RIDSSDEDR 10
++D D+D+
Sbjct: 34 KVDKKDQDK 42
>sp|NSP2_ROTH6|NON-STRUCTURAL protein 2|Rotavirus A (strain
Query: 2 RIDSSDEDR 10
++D D+D+
Sbjct: 34 KVDKKDQDK 42
>sp|NSP2_ROT41|NON-STRUCTURAL protein 2|Rotavirus A (isolate
Query: 2 RIDSSDEDR 10
++D D+D+
Sbjct: 34 KVDKKDQDK 42
>sp|NSP2_ROTWI|NON-STRUCTURAL protein 2|Rotavirus A (isolate RVA/Human/United
Query: 2 RIDSSDEDR 10
++D D+D+
Sbjct: 34 KVDKKDQDK 42
>sp|NSP2_ROTH7|NON-STRUCTURAL protein 2|Rotavirus A (isolate RVA/Human/United
Query: 2 RIDSSDEDR 10
++D D+D+
Sbjct: 34 KVDKKDQDK 42
23|Sequence|111|120|SDEDRISEVR
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 3 EDRISEVR 10
E+RI+E+R
Sbjct: 1125 EERITELR 1132
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 3 EDRISEVR 10
E+RI+E+R
Sbjct: 1125 EERITELR 1132
24|Sequence|116|125|ISEVRKVLNS
***** No hits found ******
25|Sequence|121|130|KVLNSGNFYF
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 3 LNSGNFYF 10
L SGN YF
Sbjct: 1349 LESGNLYF 1356
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 3 LNSGNFYF 10
L SGN YF
Sbjct: 1349 LESGNLYF 1356
>sp|VL2_HPV47|MINOR capsid protein L2|Human papillomavirus 47
Query: 4 NSGNFYF 10
NSG+FY
Sbjct: 498 NSGDFYL 504
>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12
Query: 4 NSGNFYF 10
NSG+FY
Sbjct: 498 NSGDFYL 504
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 KVLNSGN 7
+VLNSGN
Sbjct: 2530 EVLNSGN 2536
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 KVLNSGNFY 9
K+++SG FY
Sbjct: 292 KLISSGRFY 300
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 5 SGNFYF 10
SG+FYF
Sbjct: 176 SGHFYF 181
>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain
Query: 5 SGNFYF 10
SG+FYF
Sbjct: 176 SGHFYF 181
>sp|VP7_ROTAM|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 KVLNSGNFYF 10
+ LNS FY+
Sbjct: 315 RSLNSAAFYY 324
>sp|VP7_ROTWI|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 1 KVLNSGNFYF 10
+ LNS FY+
Sbjct: 315 RSLNSAAFYY 324
>sp|VP7_ROT41|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 KVLNSGNFYF 10
+ LNS FY+
Sbjct: 315 RSLNSAAFYY 324
>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b
Query: 4 NSGNFYF 10
N+G+FY
Sbjct: 498 NTGDFYL 504
>sp|VL2_HPV36|MINOR capsid protein L2|Human papillomavirus 36
Query: 4 NSGNFYF 10
N+G+FY
Sbjct: 498 NTGDFYL 504
>sp|VP7_ROTHP|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 KVLNSGNFYF 10
+ LNS FY+
Sbjct: 315 RSLNSAAFYY 324
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 5 SGNFYF 10
+GNF+F
Sbjct: 665 TGNFWF 670
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 5 SGNFYF 10
+GNF+F
Sbjct: 665 TGNFWF 670
>sp|VP7_ROTYO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 KVLNSGNFYF 10
+ LNS FY+
Sbjct: 315 RSLNSAAFYY 324
>sp|VP7_ROTH3|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 KVLNSGNFYF 10
+ LNS FY+
Sbjct: 315 RSLNSAAFYY 324
>sp|VP7_ROTHM|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 KVLNSGNFYF 10
+ LNS FY+
Sbjct: 315 RSLNSAAFYY 324
>sp|VP7_ROTHL|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 KVLNSGNFYF 10
+ LNS FY+
Sbjct: 315 RSLNSAAFYY 324
>sp|VP7_ROTHK|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 KVLNSGNFYF 10
+ LNS FY+
Sbjct: 315 RSLNSAAFYY 324
>sp|VP7_ROTAD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 KVLNSGNFYF 10
+ LNS FY+
Sbjct: 315 RSLNSAAFYY 324
>sp|VP7_ROTHW|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 KVLNSGNFYF 10
+ LNS FY+
Sbjct: 315 RSLNSAAFYY 324
>sp|VP7_ROTHJ|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 KVLNSGNFYF 10
+ LNS FY+
Sbjct: 315 RSLNSAAFYY 324
>sp|VL2_HPV54|MINOR capsid protein L2|Human papillomavirus type 54
Query: 3 LNSGNFYF 10
+N G+FY
Sbjct: 438 VNGGDFYL 445
>sp|UL04_HCMVM|ENVELOPE glycoprotein UL4|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 NSGNFYF 10
NSG +YF
Sbjct: 124 NSGKYYF 130
>sp|VP7_ROTHX|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 KVLNSGNFYF 10
+ LNS FY+
Sbjct: 315 RSLNSAAFYY 324
>sp|UL04_HCMVA|EARLY glycoprotein GP48|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 NSGNFYF 10
NSG +YF
Sbjct: 127 NSGKYYF 133
>sp|VP7_ROTH9|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 KVLNSGNFYF 10
+ LNS FY+
Sbjct: 315 RSLNSAAFYY 324
>sp|VP7_ROTH4|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 KVLNSGNFYF 10
+ LNS FY+
Sbjct: 315 RSLNSAAFYY 324
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 VLNSGNFY 9
+LN G FY
Sbjct: 2039 LLNFGTFY 2046
>sp|VPAP_HCMVM|DNA polymerase processivity factor|Human cytomegalovirus (strain
Query: 4 NSGNFY 9
NSGN++
Sbjct: 401 NSGNYF 406
>sp|VPAP_HCMVA|DNA polymerase processivity factor|Human cytomegalovirus (strain AD169)
Query: 4 NSGNFY 9
NSGN++
Sbjct: 401 NSGNYF 406
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 1 KVLNSGNF 8
KVL +GN+
Sbjct: 387 KVLTTGNY 394
26|Sequence|126|135|GNFYFAWSAS
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 GNFYFAWSAS 10
GN Y +WS S
Sbjct: 2045 GNIYLSWSWS 2054
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 GNFYFAWSAS 10
GN Y +WS S
Sbjct: 2045 GNIYLSWSWS 2054
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 GNFYFAWSAS 10
GN Y +WS S
Sbjct: 2045 GNIYLSWSWS 2054
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 GNFYFAWSAS 10
GN Y +WS S
Sbjct: 2046 GNIYLSWSWS 2055
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 GNFYFAWSAS 10
GN Y +WS S
Sbjct: 2045 GNIYLSWSWS 2054
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 GNFYFAWSAS 10
GN Y +WS S
Sbjct: 2045 GNIYLSWSWS 2054
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 GNFYFAWSAS 10
GN Y +WS S
Sbjct: 2045 GNIYLSWSWS 2054
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 GNFYFAWSAS 10
GN Y +WS S
Sbjct: 2045 GNVYLSWSWS 2054
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 GNFYFAWSAS 10
GN Y +WS S
Sbjct: 2045 GNVYLSWSWS 2054
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 GNFYFAWSAS 10
GN Y +WS S
Sbjct: 2045 GNVYLSWSWS 2054
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 4 YFAWSAS 10
YF WSA+
Sbjct: 388 YFKWSAT 394
>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)
Query: 3 FYFAWSA 9
+Y+AWSA
Sbjct: 312 YYWAWSA 318
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 4 YFAWSAS 10
YF WSA+
Sbjct: 389 YFKWSAN 395
>sp|NCAP_DUGBV|NUCLEOPROTEIN virus
Query: 3 FYFAWSA 9
+Y+AWSA
Sbjct: 311 YYWAWSA 317
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 NFYFAWSAS 10
N+Y WS S
Sbjct: 435 NYYANWSGS 443
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 NFYFAWSAS 10
N+Y WS S
Sbjct: 436 NYYAHWSGS 444
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 NFYFAWSAS 10
N+Y WS S
Sbjct: 435 NYYAHWSGS 443
Query: 2 NFYFAWS 8
NFY WS
Sbjct: 762 NFYDGWS 768
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 NFYFAWSAS 10
N+Y WS S
Sbjct: 437 NYYAHWSGS 445
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 NFYFAWSAS 10
N+Y WS S
Sbjct: 436 NYYAHWSGS 444
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 NFYFAWSAS 10
N+Y WS S
Sbjct: 438 NYYTHWSGS 446
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 NFYFAWSAS 10
N+Y WS S
Sbjct: 437 NYYTHWSGS 445
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 NFYFAWSAS 10
N+Y WS S
Sbjct: 435 NYYTHWSGS 443
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 NFYFAWSAS 10
N+Y WS S
Sbjct: 435 NYYANWSGS 443
Query: 2 NFYFAWS 8
NFY WS
Sbjct: 763 NFYDGWS 769
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 NFYFAWSAS 10
N+Y WS S
Sbjct: 435 NYYANWSGS 443
Query: 2 NFYFAWS 8
NFY WS
Sbjct: 762 NFYDGWS 768
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 NFYFAWSAS 10
N+Y WS S
Sbjct: 435 NYYTHWSGS 443
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 NFYFAWSAS 10
N+Y WS S
Sbjct: 437 NYYTHWSGS 445
Query: 2 NFYFAWS 8
NFY WS
Sbjct: 761 NFYDGWS 767
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 NFYFAWSAS 10
N+Y WS S
Sbjct: 435 NYYAHWSGS 443
Query: 2 NFYFAWS 8
NFY WS
Sbjct: 762 NFYDGWS 768
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 NFYFAWSAS 10
N+Y WS S
Sbjct: 435 NYYTHWSGS 443
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 NFYFAWSAS 10
N+Y WS S
Sbjct: 437 NYYTHWSGS 445
Query: 2 NFYFAWS 8
NFY WS
Sbjct: 761 NFYDGWS 767
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 NFYFAWSAS 10
N+Y WS S
Sbjct: 435 NYYTHWSGS 443
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 NFYFAWS 8
NFY WS
Sbjct: 763 NFYDGWS 769
Query: 2 NFYFAWSAS 10
N++ WS S
Sbjct: 436 NYFAHWSGS 444
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 NFYFAWSAS 10
N+Y WS S
Sbjct: 436 NYYAHWSGS 444
Query: 2 NFYFAWS 8
NFY WS
Sbjct: 763 NFYDGWS 769
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 2 NFYFAWSAS 10
N+Y WS S
Sbjct: 437 NYYAHWSGS 445
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 2 NFYFAW 7
N++F W
Sbjct: 244 NYFFEW 249
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 NFYFAW 7
N++F W
Sbjct: 244 NYFFEW 249
>sp|PG097_VACCC|PROTEIN OPG097|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 NFYFAW 7
N++F W
Sbjct: 245 NYFFEW 250
>sp|PG097_MONPV|PROTEIN OPG097|Monkeypox virus (MPXV)
Query: 2 NFYFAW 7
N++F W
Sbjct: 239 NYFFEW 244
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GNFYFAWSA 9
+FY+ W +
Sbjct: 2388 ASFYYVWKS 2396
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 NFYFAWSAS 10
N+Y W+ S
Sbjct: 445 NYYTHWTGS 453
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 NFYFAWSAS 10
N+Y W+ S
Sbjct: 445 NYYTHWAGS 453
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GNFYFAWSA 9
+FY+ W +
Sbjct: 2388 ASFYYVWKS 2396
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 NFYFAWSAS 10
N+Y W+ S
Sbjct: 446 NYYTHWAGS 454
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 NFYFAWSAS 10
N+Y W+ S
Sbjct: 446 NYYTHWAGS 454
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 2 NFYFAWSAS 10
N+Y W+ S
Sbjct: 444 NYYTHWTGS 452
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 GNFYFAW 7
GN F W
Sbjct: 1922 GNLIFCW 1928
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 NFYFAWSAS 10
N+Y W+ S
Sbjct: 445 NYYTHWAGS 453
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 NFYFAWSAS 10
N+Y W+ S
Sbjct: 445 NYYTHWAGS 453
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 2 NFYFAWSAS 10
N+Y W+ S
Sbjct: 445 NYYTHWAGS 453
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GNFYFAWSA 9
+FY+ W +
Sbjct: 2365 ASFYYIWKS 2373
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 3 FYFAWSAS 10
FYF W +
Sbjct: 581 FYFTWGGN 588
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 GNFYFAW 7
GN+ + W
Sbjct: 2009 GNYIYCW 2015
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GNFYFAWSA 9
+FY+ W +
Sbjct: 2365 ASFYYIWKS 2373
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 4 YFAWS 8
YF WS
Sbjct: 348 YFTWS 352
27|Sequence|131|140|AWSASGISLD
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 1 AWSASGISLD 10
AW S I+LD
Sbjct: 195 AWGGSYIALD 204
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 1 AWSASGISLD 10
AW S I+LD
Sbjct: 194 AWGGSYIALD 203
>sp|C_MEASA|PROTEIN C|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 WSASGIS 8
W+ASG+S
Sbjct: 6 WNASGLS 12
>sp|C_MEASE|PROTEIN C|Measles virus (strain Edmonston) (MeV)
Query: 2 WSASGIS 8
W+ASG+S
Sbjct: 6 WNASGLS 12
28|Sequence|136|145|GISLDLSLNA
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GISLDLSLN 9
G+SLDL +N
Sbjct: 199 GVSLDLCVN 207
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GISLDLSLN 9
G+SLDL +N
Sbjct: 199 GVSLDLCVN 207
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 GISLDLSLN 9
G+SLDL +N
Sbjct: 199 GVSLDLCVN 207
29|Sequence|141|150|LSLNAHRSMQ
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 LSLNAHRS 8
LSL+ HRS
Sbjct: 2683 LSLDEHRS 2690
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 LSLNAHRS 8
LSL+ HRS
Sbjct: 2683 LSLDEHRS 2690
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 NAHRSMQ 10
N HR+MQ
Sbjct: 470 NQHRTMQ 476
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 4 NAHRSMQ 10
N HR+MQ
Sbjct: 470 NQHRTMQ 476
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 NAHRSMQ 10
N HR+MQ
Sbjct: 470 NQHRTMQ 476
>sp|X_HBVB7|PROTEIN X|Hepatitis B virus genotype B1
Query: 2 SLNAHRSM 9
++NAHR++
Sbjct: 82 TVNAHRNL 89
>sp|X_HBVB8|PROTEIN X|Hepatitis B virus genotype B1
Query: 2 SLNAHRSM 9
++NAHR++
Sbjct: 82 TVNAHRNL 89
>sp|X_HBVB1|PROTEIN X|Hepatitis B virus genotype B1
Query: 2 SLNAHRSM 9
++NAHR++
Sbjct: 82 TVNAHRNL 89
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton
Query: 3 LNAHRSM 9
+NAHR M
Sbjct: 32 INAHRLM 38
>sp|X_HBVB2|PROTEIN X|Hepatitis B virus genotype B2
Query: 2 SLNAHRSM 9
++NAHR++
Sbjct: 82 TVNAHRNL 89
>sp|X_HBVA7|PROTEIN X|Hepatitis B virus genotype A2
Query: 2 SLNAHRSM 9
++NAH+S+
Sbjct: 82 TVNAHQSL 89
30|Sequence|146|155|HRSMQEQTTD
***** No hits found ******
31|Sequence|151|160|EQTTDNRFFW
>sp|Y137_ADE02|UNCHARACTERIZED protein B-137|Human adenovirus C serotype 2
Query: 2 QTTDNRFFW 10
QTT R FW
Sbjct: 109 QTTGERSFW 117
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 5 DNRFFW 10
DNRF W
Sbjct: 1188 DNRFTW 1193
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 5 DNRFFW 10
DNRF W
Sbjct: 1188 DNRFTW 1193
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 1 EQTTDNRFF 9
EQT DN+ F
Sbjct: 240 EQTIDNQIF 248
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 EQTTDNRFFW 10
EQT N W
Sbjct: 2297 EQTLTNSIMW 2306
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 EQTTDNRFF 9
E TD RFF
Sbjct: 683 EAGTDGRFF 691
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 5 DNRFFW 10
DNR +W
Sbjct: 171 DNRVYW 176
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 5 DNRFFW 10
DNR +W
Sbjct: 171 DNRVYW 176
>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)
Query: 3 TTDNRFFW 10
TTD FW
Sbjct: 250 TTDADVFW 257
>sp|IL1BP_CWPXB|INTERLEUKIN-1-BINDING protein|Cowpox virus (strain Brighton Red)
Query: 3 TTDNRFFW 10
TTD FW
Sbjct: 250 TTDADVFW 257
>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /
Query: 1 EQTTDNRF 8
++TTDN +
Sbjct: 374 DKTTDNNY 381
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin)
Query: 1 EQTTDN 6
E+TTDN
Sbjct: 62 ERTTDN 67
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 EQTTDN 6
E+TTDN
Sbjct: 62 ERTTDN 67
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EQTTDNRFF 9
E DNRF+
Sbjct: 2915 EAVEDNRFW 2923
32|Sequence|156|165|NRFFWNQSLH
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 FFWNQSL 9
FFW Q+L
Sbjct: 761 FFWMQTL 767
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 FFWNQSL 9
FFW Q+L
Sbjct: 761 FFWMQTL 767
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 FFWNQSL 9
FFW Q+L
Sbjct: 760 FFWMQTL 766
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 3 FFWNQSL 9
FFW Q+L
Sbjct: 761 FFWMQTL 767
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 3 FFWNQSL 9
FFW Q+L
Sbjct: 759 FFWMQTL 765
>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 3 FFWNQSL 9
F W QSL
Sbjct: 10 FLWTQSL 16
>sp|MATRX_NIPAV|MATRIX protein|Nipah virus
Query: 1 NRFFWNQS 8
NR WN S
Sbjct: 310 NRLTWNNS 317
>sp|MATRX_HENDH|MATRIX protein|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 NRFFWNQS 8
NR WN S
Sbjct: 310 NRLTWNNS 317
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 NRFFWNQSLH 10
+R WN++LH
Sbjct: 326 SRTDWNKTLH 335
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 WNQSLH 10
WN++LH
Sbjct: 341 WNETLH 346
>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)
Query: 3 FFWNQSL 9
F W QSL
Sbjct: 10 FRWTQSL 16
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 3 FFWNQSL 9
F W QSL
Sbjct: 10 FRWTQSL 16
>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 3 FFWNQSL 9
F W QSL
Sbjct: 10 FRWTQSL 16
>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)
Query: 3 FFWNQSL 9
F W QSL
Sbjct: 10 FRWTQSL 16
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 3 FFWNQSL 9
F W QSL
Sbjct: 10 FRWTQSL 16
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 1 NRFFWNQS 8
+ F WNQ+
Sbjct: 216 DTFVWNQN 223
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 NRFFWNQ 7
NR+ W Q
Sbjct: 259 NRYDWRQ 265
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 NRFFWNQ 7
NR+ W Q
Sbjct: 259 NRYDWRQ 265
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 4 FWNQSL 9
FW QSL
Sbjct: 508 FWLQSL 513
>sp|PORTL_HHV7J|PORTAL protein|Human herpesvirus 7 (strain JI)
Query: 2 RFFWNQSLH 10
FF QS+H
Sbjct: 71 EFFKGQSIH 79
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 4 FWNQSL 9
FW QSL
Sbjct: 507 FWLQSL 512
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 5 WNQSLH 10
W Q LH
Sbjct: 1006 WKQPLH 1011
33|Sequence|161|170|NQSLHLHLKH
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 QSLHLHLKH 10
Q LH HL H
Sbjct: 638 QHLHTHLNH 646
>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 NQSLHLHLKH 10
+QSL+L L+H
Sbjct: 81 DQSLYLGLQH 90
>sp|LMP2_EBVB9|LATENT membrane protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 NQSLHLHLKH 10
+QSL+L L+H
Sbjct: 81 DQSLYLGLQH 90
>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 NQSLHLHLKH 10
+QSL+L L+H
Sbjct: 81 DQSLYLGLQH 90
>sp|BTRF1_EBVG|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 HLHLKH 10
HL+LKH
Sbjct: 258 HLYLKH 263
>sp|BTRF1_EBVB9|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 HLHLKH 10
HL+LKH
Sbjct: 258 HLYLKH 263
>sp|BTRF1_EBVA8|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 HLHLKH 10
HL+LKH
Sbjct: 258 HLYLKH 263
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 SLHLHL 8
+LHLHL
Sbjct: 748 TLHLHL 753
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 SLHLHL 8
+LHLHL
Sbjct: 748 TLHLHL 753
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 SLHLHL 8
+LHLHL
Sbjct: 748 TLHLHL 753
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 2 QSLHLHLKH 10
Q H+HL H
Sbjct: 703 QPPHVHLSH 711
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 2 QSLHLHLKH 10
Q +H HL H
Sbjct: 638 QHVHTHLNH 646
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 2 QSLHLHLKH 10
Q +H HL H
Sbjct: 631 QHVHTHLNH 639
>sp|ORF23_HHV8P|PROTEIN ORF23|Human herpesvirus 8 type P
Query: 1 NQSLHLHLKH 10
N+ HL LKH
Sbjct: 255 NRLQHLFLKH 264
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 3 SLHLHL 8
SLHLH
Sbjct: 149 SLHLHF 154
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 3 SLHLHL 8
SLHLH
Sbjct: 147 SLHLHF 152
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 HLHLKH 10
++HLKH
Sbjct: 1040 NIHLKH 1045
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 HLHLKH 10
++HLKH
Sbjct: 1040 NIHLKH 1045
>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 QSLHLHLK 9
+S+HLH +
Sbjct: 248 KSVHLHYR 255
34|Sequence|166|175|LHLKHYGVNC
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 2 HLKHYGV 8
HL+HYGV
Sbjct: 272 HLQHYGV 278
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 4 KHYGVN 9
+HYGVN
Sbjct: 233 RHYGVN 238
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 4 KHYGVN 9
+HYGVN
Sbjct: 233 RHYGVN 238
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 4 KHYGVN 9
+HYGVN
Sbjct: 233 RHYGVN 238
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 4 KHYGVN 9
+HYGVN
Sbjct: 233 RHYGVN 238
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 HLKHYGVN 9
HL HY +N
Sbjct: 2277 HLSHYVLN 2284
Query: 2 HLKHYG 7
HLKH G
Sbjct: 1149 HLKHGG 1154
Query: 6 YGVNC 10
YG NC
Sbjct: 4363 YGCNC 4367
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 LKHYGVNC 10
L+HYG C
Sbjct: 931 LQHYGQVC 938
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 3 LKHYGV 8
L+HYGV
Sbjct: 250 LEHYGV 255
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 3 LKHYGV 8
L+HYGV
Sbjct: 250 LEHYGV 255
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 3 LKHYGV 8
L+HYGV
Sbjct: 250 LEHYGV 255
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 HLKHYGVN 9
HL HY +N
Sbjct: 2277 HLSHYVLN 2284
Query: 2 HLKHYG 7
HLKH G
Sbjct: 1149 HLKHGG 1154
Query: 6 YGVNC 10
YG NC
Sbjct: 4363 YGCNC 4367
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 4 KHYGV 8
KHYGV
Sbjct: 834 KHYGV 838
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 KHYGV 8
KHYGV
Sbjct: 1249 KHYGV 1253
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 KHYGV 8
KHYGV
Sbjct: 1249 KHYGV 1253
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 KHYGV 8
KHYGV
Sbjct: 1249 KHYGV 1253
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 KHYGV 8
KHYGV
Sbjct: 1249 KHYGV 1253
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 KHYGV 8
KHYGV
Sbjct: 1249 KHYGV 1253
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 KHYGV 8
KHYGV
Sbjct: 1249 KHYGV 1253
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 KHYGV 8
KHYGV
Sbjct: 1249 KHYGV 1253
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 KHYGV 8
KHYGV
Sbjct: 1249 KHYGV 1253
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 KHYGV 8
KHYGV
Sbjct: 1249 KHYGV 1253
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 LKHYGVNC 10
L+HYG C
Sbjct: 931 LQHYGQIC 938
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 3 LKHYGVNC 10
L+HYG C
Sbjct: 950 LQHYGQLC 957
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 LHLKHYG 7
+HLKH G
Sbjct: 1041 IHLKHGG 1047
>sp|UL34_HCMVM|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 HLKHY 6
HL+HY
Sbjct: 212 HLRHY 216
>sp|UL34_HCMVA|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 HLKHY 6
HL+HY
Sbjct: 212 HLRHY 216
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LHLKHYG 7
+HLKH G
Sbjct: 1041 IHLKHGG 1047
>sp|UL34_HCMVT|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 HLKHY 6
HL+HY
Sbjct: 212 HLRHY 216
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 4 KHYGV 8
KHYG+
Sbjct: 804 KHYGI 808
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 4 KHYGV 8
KHYG+
Sbjct: 795 KHYGI 799
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 4 KHYGV 8
KHYG+
Sbjct: 796 KHYGI 800
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 5 HYGVNC 10
HY +NC
Sbjct: 1461 HYMLNC 1466
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 3 LKHYGVN 9
LKH G+N
Sbjct: 636 LKHSGLN 642
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 3 LKHYGVN 9
LKH G+N
Sbjct: 636 LKHSGLN 642
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 3 LKHYGVN 9
LKH G+N
Sbjct: 636 LKHSGLN 642
>sp|CEP2_HCMVA|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain AD169)
Query: 5 HYGVN 9
HYGVN
Sbjct: 82 HYGVN 86
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 5 HYGVNC 10
HY NC
Sbjct: 1450 HYANNC 1455
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 5 HYGVNC 10
HY NC
Sbjct: 1450 HYANNC 1455
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 5 HYGVNC 10
HY NC
Sbjct: 1450 HYANNC 1455
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 5 HYGVNC 10
HY NC
Sbjct: 1450 HYANNC 1455
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 5 HYGVNC 10
HY NC
Sbjct: 1450 HYANNC 1455
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 5 HYGVNC 10
HY NC
Sbjct: 1450 HYANNC 1455
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 5 HYGVNC 10
HY NC
Sbjct: 1450 HYANNC 1455
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 5 HYGVNC 10
HY NC
Sbjct: 1450 HYANNC 1455
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 5 HYGVNC 10
HY NC
Sbjct: 1450 HYANNC 1455
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LHLKHYG 7
L L HYG
Sbjct: 139 LMLSHYG 145
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LHLKHYG 7
L L HYG
Sbjct: 139 LMLSHYG 145
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LHLKHYGVN 9
+H+ YG N
Sbjct: 1004 MHVSDYGYN 1012
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LHLKHYGVN 9
+H+ YG N
Sbjct: 1004 MHVSDYGYN 1012
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LHLKHYGVN 9
+H+ YG N
Sbjct: 1004 MHVSDYGYN 1012
>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LHLKHY 6
L+LKHY
Sbjct: 19 LYLKHY 24
>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LHLKHY 6
L+LKHY
Sbjct: 19 LYLKHY 24
>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LHLKHY 6
L+LKHY
Sbjct: 19 LYLKHY 24
>sp|NRAM_I96A1|NEURAMINIDASE A virus (strain A/Niigata/137/1996
Query: 1 LHLKHYGVN 9
LH K Y N
Sbjct: 35 LHFKQYECN 43
>sp|VP30_EBORR|TRANSCRIPTIONAL activator VP30|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 HLKHYGV 8
HL+H G+
Sbjct: 193 HLRHEGL 199
>sp|VP30_EBORE|TRANSCRIPTIONAL activator VP30|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 HLKHYGV 8
HL+H G+
Sbjct: 193 HLRHEGL 199
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 HLKHYGV 8
HL HY +
Sbjct: 1117 HLPHYQI 1123
>sp|HEMA_INBP9|HEMAGGLUTININ B virus (strain B/Panama/45/1990)
Query: 1 LHLKHYGVN 9
LH K+ G+N
Sbjct: 309 LHAKYGGLN 317
>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)
Query: 1 LHLKHYGVN 9
LH K+ G+N
Sbjct: 309 LHAKYGGLN 317
>sp|HEMA_INBTF|HEMAGGLUTININ B virus (strain B/Texas/4/1990)
Query: 1 LHLKHYGVN 9
LH K+ G+N
Sbjct: 309 LHAKYGGLN 317
>sp|HEMA_INBVL|HEMAGGLUTININ B virus (strain B/Victoria/103/1989)
Query: 1 LHLKHYGVN 9
LH K+ G+N
Sbjct: 309 LHAKYGGLN 317
35|Sequence|171|180|YGVNCDDWLL
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 GVNCDDWL 9
G +CDDWL
Sbjct: 2194 GRSCDDWL 2201
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 1 YGVNCDDWLL 10
Y C+DW+L
Sbjct: 188 YKTCCNDWVL 197
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 1 YGVNCDDWLL 10
Y C+DW+L
Sbjct: 187 YKTCCNDWVL 196
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 2 GVNCDDWLL 10
G+NC W L
Sbjct: 101 GINCRRWRL 109
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 YGVNCD 6
YG NCD
Sbjct: 4363 YGCNCD 4368
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 YGVNCD 6
YG NCD
Sbjct: 4363 YGCNCD 4368
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 2 GVNCDDWLL 10
G N DDW +
Sbjct: 5 GTNNDDWYI 13
>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 CDDWLL 10
CD W+L
Sbjct: 372 CDQWVL 377
>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 CDDWLL 10
CD W+L
Sbjct: 372 CDQWVL 377
>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 CDDWLL 10
CD W+L
Sbjct: 372 CDQWVL 377
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 4 NCDDWL 9
NC DW+
Sbjct: 851 NCIDWV 856
>sp|ORF27_HHV8P|PROTEIN ORF27|Human herpesvirus 8 type P
Query: 4 NCDDW 8
NCD W
Sbjct: 273 NCDPW 277
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 4 NCDDWL 9
NC DW+
Sbjct: 851 NCIDWV 856
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 NCDDWLL 10
NC+ W L
Sbjct: 271 NCEQWSL 277
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 NCDDWLL 10
NC+ W L
Sbjct: 271 NCEQWSL 277
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 NCDDWLL 10
NC+ W L
Sbjct: 270 NCEQWSL 276
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 NCDDWLL 10
NC+ W L
Sbjct: 271 NCEQWSL 277
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 NCDDWLL 10
NC+ W L
Sbjct: 271 NCEQWSL 277
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 5 CDDWLL 10
C+DW++
Sbjct: 194 CNDWVV 199
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 5 CDDWLL 10
C DW+L
Sbjct: 195 CGDWVL 200
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 YGVNCDDWLL 10
Y V+CD +L
Sbjct: 953 YSVDCDGAIL 962
Query: 4 NCDDWL 9
+ DDWL
Sbjct: 802 DSDDWL 807
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 YGVNCDDWLL 10
Y V+CD +L
Sbjct: 953 YSVDCDGAIL 962
Query: 4 NCDDWL 9
+ DDWL
Sbjct: 802 DSDDWL 807
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 YGVNCDDWLL 10
Y V+CD +L
Sbjct: 953 YSVDCDGAIL 962
Query: 4 NCDDWL 9
+ DDWL
Sbjct: 802 DSDDWL 807
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 5 CDDWLL 10
C DW+L
Sbjct: 189 CRDWVL 194
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VNCDDW 8
+NC DW
Sbjct: 128 LNCIDW 133
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 5 CDDWL 9
C+DW+
Sbjct: 214 CNDWI 218
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 4 NCDDW 8
NC+ W
Sbjct: 14 NCESW 18
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 YGVNCD 6
YG +CD
Sbjct: 4379 YGCSCD 4384
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 DDWL 9
DDWL
Sbjct: 19 DDWL 22
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 DDWL 9
DDWL
Sbjct: 19 DDWL 22
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 YGVNCD 6
YG +CD
Sbjct: 4356 YGCSCD 4361
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 4 NCDDWL 9
+ DDWL
Sbjct: 802 DSDDWL 807
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 NCDDWL 9
+ DDWL
Sbjct: 802 DSDDWL 807
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 4 NCDDWL 9
+ DDWL
Sbjct: 802 DSDDWL 807
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 4 NCDDWL 9
+ DDWL
Sbjct: 802 DSDDWL 807
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 NCDDWL 9
+ DDWL
Sbjct: 802 DSDDWL 807
>sp|REV_HV1RH|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 5 CDDWLL 10
C +W+L
Sbjct: 55 CSEWIL 60
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 4 NCDDWL 9
+ DDWL
Sbjct: 802 DSDDWL 807
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 4 NCDDWL 9
+CD W+
Sbjct: 950 DCDGWV 955
>sp|PG085_YLDV|PROBABLE metalloendopeptidase G1-type|Yaba-like disease virus (YLDV)
Query: 5 CDDWLL 10
CDD+L+
Sbjct: 288 CDDFLM 293
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 YGVNCD 6
YG +CD
Sbjct: 4379 YGCSCD 4384
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 YGVNCD 6
YG +CD
Sbjct: 4356 YGCSCD 4361
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 4 NCDDWLL 10
+C DW++
Sbjct: 226 SCTDWVI 232
>sp|PKG1_ADE05|PACKAGING protein 1|Human adenovirus C serotype 5
Query: 4 NCDDWLL 10
+C DW++
Sbjct: 383 SCYDWII 389
>sp|PKG1_ADE02|PACKAGING protein 1|Human adenovirus C serotype 2
Query: 4 NCDDWLL 10
+C DW++
Sbjct: 383 SCYDWII 389
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 5 CDDWLL 10
C DW++
Sbjct: 232 CGDWVI 237
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 4 NCDDWL 9
+ DDWL
Sbjct: 802 DSDDWL 807
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 5 CDDWLL 10
C DW++
Sbjct: 195 CKDWVI 200
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 VNCDDW 8
++CD W
Sbjct: 2411 LSCDSW 2416
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 5 CDDWLL 10
C DW++
Sbjct: 243 CSDWVV 248
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 VNCDDW 8
++CD W
Sbjct: 2411 LSCDSW 2416
Query: 6 DDWL 9
DDWL
Sbjct: 1980 DDWL 1983
>sp|UL26_HCMVM|TEGUMENT protein UL26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GVNCDDWL 9
G+N DD++
Sbjct: 44 GLNLDDFM 51
>sp|UL26_HCMVA|TEGUMENT protein UL26|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GVNCDDWL 9
G+N DD++
Sbjct: 44 GLNLDDFM 51
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 3 VNCDDWL 9
V C +W+
Sbjct: 1631 VGCSEWI 1637
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 5 CDDWLL 10
C DW++
Sbjct: 193 CKDWVV 198
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 5 CDDWLL 10
C DW++
Sbjct: 226 CTDWVM 231
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 5 CDDW 8
CD+W
Sbjct: 48 CDEW 51
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 4 NCDDWLL 10
+C DW++
Sbjct: 225 SCTDWVV 231
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 5 CDDWLL 10
C DW++
Sbjct: 193 CKDWVV 198
>sp|US01_HCMVM|PROTEIN US1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 NCDDW 8
NC DW
Sbjct: 80 NCGDW 84
>sp|US01_HCMVA|UNCHARACTERIZED protein HQLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 NCDDW 8
NC DW
Sbjct: 80 NCGDW 84
>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)
Query: 2 GVNCD 6
G+NCD
Sbjct: 250 GMNCD 254
>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40
Query: 5 CDDWLL 10
C DW++
Sbjct: 383 CYDWII 388
>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12
Query: 5 CDDWLL 10
C DW++
Sbjct: 386 CYDWII 391
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 5 CDDWLL 10
C DW++
Sbjct: 228 CGDWVI 233
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 1 YGVNCDDW 8
YG+N +W
Sbjct: 588 YGLNDKNW 595
36|Sequence|176|185|DDWLLRLMCG
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 WLLRLMC 9
W+LR++C
Sbjct: 1472 WMLRMVC 1478
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 WLLRLMC 9
WLLR+ C
Sbjct: 1471 WLLRMSC 1477
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 DDWLLRLMCG 10
D+ LRL CG
Sbjct: 267 DELALRLQCG 276
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 1 DDWLLRLMCG 10
D+ LRL CG
Sbjct: 267 DELALRLQCG 276
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 WLLRLMCG 10
WL RLM G
Sbjct: 751 WLSRLMIG 758
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 DDWLLRLMCG 10
D WLLR G
Sbjct: 721 DFWLLRFQPG 730
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 DDWLLRLMCG 10
D WLLR G
Sbjct: 721 DFWLLRFQPG 730
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 2 DWLLRLMC 9
D L+R MC
Sbjct: 262 DMLMRAMC 269
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 3 WLLRLMC 9
W+L L+C
Sbjct: 434 WILSLLC 440
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 DWLLRLMC 9
DWL ++C
Sbjct: 2901 DWLWAVLC 2908
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 LLRLMCG 10
LLR +CG
Sbjct: 169 LLRRLCG 175
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LLRLMCG 10
LLR +CG
Sbjct: 169 LLRRLCG 175
>sp|EBNA5_EBVG|EPSTEIN-BARR nuclear antigen leader protein|Epstein-Barr virus (strain GD1)
Query: 2 DWLLRL 7
+WLLR+
Sbjct: 476 EWLLRI 481
>sp|EBNA5_EBVB9|EPSTEIN-BARR nuclear antigen leader protein|Epstein-Barr virus (strain B95-8)
Query: 2 DWLLRL 7
+WLLR+
Sbjct: 476 EWLLRI 481
>sp|EBNA5_EBVA8|EPSTEIN-BARR nuclear antigen leader protein|Epstein-Barr virus (strain AG876)
Query: 2 DWLLRL 7
+WLLR+
Sbjct: 476 EWLLRI 481
>sp|US16_HCMVA|UNCHARACTERIZED protein HVLF2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 WLLRLMCG 10
W LRL+ G
Sbjct: 210 WPLRLLLG 217
>sp|VE7_HPV63|PROTEIN E7|Human papillomavirus type 63
Query: 2 DWLLRLMC 9
D LLRL C
Sbjct: 49 DQLLRLTC 56
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 WLLRLM 8
WLLR++
Sbjct: 1040 WLLRII 1045
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 WLLRLM 8
WLLR++
Sbjct: 1040 WLLRII 1045
>sp|US16_HCMVM|PROTEIN US16|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 WLLRLMCG 10
W LRL+ G
Sbjct: 210 WPLRLLLG 217
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 WLLRLM 8
WLLR++
Sbjct: 1049 WLLRIV 1054
>sp|GM_HHV7J|ENVELOPE glycoprotein M|Human herpesvirus 7 (strain JI)
Query: 3 WLLRLMCG 10
W+L ++C
Sbjct: 14 WVLSIICA 21
>sp|GM_HHV6Z|ENVELOPE glycoprotein M|Human herpesvirus 6B (strain Z29)
Query: 3 WLLRLMCG 10
WL+ ++C
Sbjct: 14 WLVSIICA 21
>sp|GM_HHV6U|ENVELOPE glycoprotein M|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 WLLRLMCG 10
WL+ ++C
Sbjct: 14 WLVSIICA 21
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 3 WLLRLMCG 10
WL ++CG
Sbjct: 87 WLPLIVCG 94
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 3 WLLRLMCG 10
WL+RL G
Sbjct: 180 WLIRLTEG 187
>sp|RL12_HCMVM|UNCHARACTERIZED protein RL12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 WLLRLMC 9
W L L+C
Sbjct: 369 WALTLIC 375
>sp|IL10H_HCMVM|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain Merlin)
Query: 2 DWLLR 6
DWLLR
Sbjct: 86 DWLLR 90
>sp|IL10H_HCMVA|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain AD169)
Query: 2 DWLLR 6
DWLLR
Sbjct: 85 DWLLR 89
37|Sequence|181|190|RLMCGGVEIR
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RLMCGGV 7
RL CGGV
Sbjct: 342 RLFCGGV 348
>sp|BTRF1_EBVG|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RLMCGGVEI 9
RL+C G E+
Sbjct: 365 RLLCQGAEL 373
>sp|BTRF1_EBVB9|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RLMCGGVEI 9
RL+C G E+
Sbjct: 365 RLLCQGAEL 373
>sp|BTRF1_EBVA8|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 RLMCGGVEI 9
RL+C G E+
Sbjct: 365 RLLCQGAEL 373
>sp|VE7_HPV38|PROTEIN E7|Human papillomavirus 38
Query: 2 LMCGGVEIR 10
++CGG E+R
Sbjct: 53 VLCGGCEVR 61
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 4 CGGVEI 9
C GVEI
Sbjct: 163 CAGVEI 168
>sp|PG055_VARV|PROTEIN OPG055|Variola virus
Query: 4 CGGVEIR 10
CGGV+ R
Sbjct: 332 CGGVKNR 338
>sp|PG055_VAR67|PROTEIN OPG055|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 CGGVEIR 10
CGGV+ R
Sbjct: 332 CGGVKNR 338
>sp|PG055_VACCC|PROTEIN OPG055|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 CGGVEIR 10
CGGV+ R
Sbjct: 332 CGGVKNR 338
>sp|PG055_MONPV|PROTEIN OPG055|Monkeypox virus (MPXV)
Query: 4 CGGVEIR 10
CGGV+ R
Sbjct: 332 CGGVKNR 338
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 5 GGVEIR 10
GG+EIR
Sbjct: 924 GGLEIR 929
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 5 GGVEIR 10
GG+EIR
Sbjct: 924 GGLEIR 929
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 LMCGG 6
+MCGG
Sbjct: 5032 VMCGG 5036
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 LMCGG 6
+MCGG
Sbjct: 5070 VMCGG 5074
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 LMCGG 6
+MCGG
Sbjct: 5090 VMCGG 5094
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 LMCGG 6
+MCGG
Sbjct: 5120 VMCGG 5124
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 4 CGGVEI 9
C GVE+
Sbjct: 127 CAGVEV 132
38|Sequence|186|195|GVEIRTIYAA
***** No hits found ******
39|Sequence|191|200|TIYAAHKQAK
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 TIYAAHKQA 9
TIYA H A
Sbjct: 790 TIYARHVNA 798
40|Sequence|196|205|HKQAKACLIS
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 2 KQAKACLIS 10
K+AK C IS
Sbjct: 297 KEAKVCTIS 305
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 2 KQAKACLIS 10
K+AK C IS
Sbjct: 297 KEAKVCTIS 305
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 1 HKQAKACLI 9
+KQ + CLI
Sbjct: 178 YKQTQLCLI 186
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 1 HKQAKACLI 9
+KQ + CLI
Sbjct: 151 YKQTQLCLI 159
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 1 HKQAKACLI 9
+KQ + CLI
Sbjct: 151 YKQTQLCLI 159
>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)
Query: 2 KQAKACLIS 10
K+ + CL+S
Sbjct: 225 KEGRGCLVS 233
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 HKQAKACL 8
HK KAC+
Sbjct: 2752 HKLKKACV 2759
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 HKQAKACL 8
HK KAC+
Sbjct: 2772 HKLKKACV 2779
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 HKQAKACL 8
HK KAC+
Sbjct: 2802 HKLKKACV 2809
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 HKQAKACL 8
HK KAC+
Sbjct: 2752 HKLKKACV 2759
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 HKQAKACL 8
HK KAC+
Sbjct: 2772 HKLKKACV 2779
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 HKQAKACL 8
HK KAC+
Sbjct: 2802 HKLKKACV 2809
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 1 HKQAKACLI 9
+KQ + CL+
Sbjct: 148 YKQTQLCLV 156
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 1 HKQAKACLI 9
+KQ + CL+
Sbjct: 148 YKQTQLCLV 156
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 1 HKQAKACLI 9
+KQ + CL+
Sbjct: 150 YKQTQLCLV 158
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 1 HKQAKACLI 9
+KQ + CL+
Sbjct: 148 YKQTQLCLV 156
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 2 KQAKACLIS 10
KQA +CL S
Sbjct: 695 KQAISCLSS 703
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 2 KQAKACLIS 10
KQA +CL S
Sbjct: 695 KQAISCLSS 703
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 KQAKACLIS 10
KQA +CL S
Sbjct: 695 KQAISCLSS 703
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 KQAKACLIS 10
KQA +CL S
Sbjct: 695 KQAISCLSS 703
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 KQAKACLIS 10
KQA +CL S
Sbjct: 687 KQAISCLSS 695
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 2 KQAKACLIS 10
KQA +CL S
Sbjct: 695 KQAISCLSS 703
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 2 KQAKACLIS 10
KQA +CL S
Sbjct: 695 KQAISCLSS 703
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 2 KQAKACLIS 10
KQA +CL S
Sbjct: 695 KQAISCLSS 703
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 2 KQAKACLIS 10
KQA +CL S
Sbjct: 695 KQAISCLSS 703
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 HKQAKAC 7
HK KAC
Sbjct: 2714 HKLKKAC 2720
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 HKQAKACLIS 10
H+Q K LIS
Sbjct: 1712 HQQRKVQLIS 1721
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 HKQAKAC 7
HK KAC
Sbjct: 2714 HKLKKAC 2720
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 1 HKQAKACLI 9
+KQ + C+I
Sbjct: 151 YKQTQLCII 159
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 1 HKQAKACLI 9
+KQ + C+I
Sbjct: 151 YKQTQLCII 159
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 1 HKQAKACLI 9
+KQ + C+I
Sbjct: 150 YKQTQLCII 158
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 1 HKQAKACLI 9
+KQ + CL+
Sbjct: 152 YKQTQLCLL 160
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 1 HKQAKACLI 9
+KQ + CL+
Sbjct: 152 YKQTQLCLL 160
41|Sequence|201|210|ACLISRLSCE
>sp|VP6_ROTJ1|INTERMEDIATE capsid protein VP6|Rotavirus X (strain
Query: 1 ACLISRLSCE 10
AC+I+ SC+
Sbjct: 386 ACMIAAFSCK 395
>sp|VP6_ROTB2|INTERMEDIATE capsid protein VP6|Rotavirus X (isolate
Query: 1 ACLISRLSCE 10
AC+I+ SC+
Sbjct: 386 ACMIAAFSCK 395
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 1 ACLISRLSCE 10
AC + R+ CE
Sbjct: 534 ACRLYRMMCE 543
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 2 CLISRLSCE 10
CLI+ CE
Sbjct: 21 CLITEAECE 29
42|Sequence|206|215|RLSCERAGTR
>sp|VU55_HHV6U|UNCHARACTERIZED protein U55|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 RLSCER 6
R+SCER
Sbjct: 331 RISCER 336
>sp|TEG6_HHV1E|TEGUMENT protein UL55|Human herpesvirus 1 (strain HFEM)
Query: 1 RLSCERAGT 9
R SCE +GT
Sbjct: 53 RASCETSGT 61
>sp|TEG6_HHV11|TEGUMENT protein UL55|Human herpesvirus 1 (strain 17)
Query: 1 RLSCERAGT 9
R SCE +GT
Sbjct: 53 RASCETSGT 61
>sp|VU55_HHV6Z|UNCHARACTERIZED protein U55|Human herpesvirus 6B (strain Z29)
Query: 1 RLSCER 6
R+SCE+
Sbjct: 391 RISCEK 396
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 CERAGTR 10
CE AGT+
Sbjct: 2743 CESAGTQ 2749
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 CERAGTR 10
CE AGT+
Sbjct: 2743 CESAGTQ 2749
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 CERAGTR 10
CE AGT+
Sbjct: 2743 CESAGTQ 2749
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 CERAGTR 10
CE AGT+
Sbjct: 2743 CESAGTQ 2749
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 CERAGTR 10
CE AGT+
Sbjct: 2743 CESAGTQ 2749
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 CERAGTR 10
CE AGT+
Sbjct: 2743 CESAGTQ 2749
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 CERAGTR 10
CE AGT+
Sbjct: 2743 CESAGTQ 2749
>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b
Query: 3 SCERAGT 9
+C++AGT
Sbjct: 18 TCKQAGT 24
>sp|VL2_HPV57|MINOR capsid protein L2|Human papillomavirus 57
Query: 3 SCERAGT 9
+C++AGT
Sbjct: 19 TCKQAGT 25
>sp|VL2_HPV47|MINOR capsid protein L2|Human papillomavirus 47
Query: 3 SCERAGT 9
+C++AGT
Sbjct: 18 TCKQAGT 24
>sp|VL2_HPV30|MINOR capsid protein L2|Human papillomavirus 30
Query: 3 SCERAGT 9
+C++AGT
Sbjct: 20 TCKQAGT 26
>sp|VL2_HPV2A|MINOR capsid protein L2|Human papillomavirus type 2a
Query: 3 SCERAGT 9
+C++AGT
Sbjct: 19 TCKQAGT 25
>sp|VL2_HPV27|MINOR capsid protein L2|Human papillomavirus 27
Query: 3 SCERAGT 9
+C++AGT
Sbjct: 18 TCKQAGT 24
>sp|VL2_HPV16|MINOR capsid protein L2|Human papillomavirus type 16
Query: 3 SCERAGT 9
+C++AGT
Sbjct: 21 TCKQAGT 27
>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12
Query: 3 SCERAGT 9
+C++AGT
Sbjct: 18 TCKQAGT 24
>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8
Query: 3 SCERAGT 9
+C++AGT
Sbjct: 18 TCKQAGT 24
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 RLSCERAGT 9
++ C+ AGT
Sbjct: 4275 KMLCDHAGT 4283
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 RLSCERAGT 9
++ C+ AGT
Sbjct: 4313 KMLCDHAGT 4321
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 RLSCERAGT 9
++ C+ AGT
Sbjct: 4333 KMLCDHAGT 4341
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 RLSCERAGT 9
++ C+ AGT
Sbjct: 4363 KMLCDHAGT 4371
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 RLSCERAGT 9
++ C+ AGT
Sbjct: 4275 KMLCDHAGT 4283
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 RLSCERAGT 9
++ C+ AGT
Sbjct: 4313 KMLCDHAGT 4321
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 RLSCERAGT 9
++ C+ AGT
Sbjct: 4333 KMLCDHAGT 4341
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 RLSCERAGT 9
++ C+ AGT
Sbjct: 4363 KMLCDHAGT 4371
>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5
Query: 3 SCERAGT 9
+C++AGT
Sbjct: 18 TCKQAGT 24
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 2 LSCERAG 8
L+C RAG
Sbjct: 1026 LACPRAG 1032
>sp|VL2_HPV24|MINOR capsid protein L2|Human papillomavirus 24
Query: 3 SCERAGT 9
+C++AGT
Sbjct: 18 TCKQAGT 24
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 LSCERAG 8
L+C RAG
Sbjct: 1026 LACPRAG 1032
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 2 LSCERAG 8
L+C RAG
Sbjct: 1026 LACPRAG 1032
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 LSCERAG 8
L+C RAG
Sbjct: 1026 LACPRAG 1032
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 2 LSCERAG 8
L+C RAG
Sbjct: 1026 LACPRAG 1032
>sp|VL2_HPV25|MINOR capsid protein L2|Human papillomavirus 25
Query: 3 SCERAGT 9
+C++AGT
Sbjct: 18 TCKQAGT 24
>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20
Query: 3 SCERAGT 9
+C++AGT
Sbjct: 18 TCKQAGT 24
>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21
Query: 3 SCERAGT 9
+C++AGT
Sbjct: 18 TCKQAGT 24
>sp|VL2_HPV19|MINOR capsid protein L2|Human papillomavirus 19
Query: 3 SCERAGT 9
+C++AGT
Sbjct: 18 TCKQAGT 24
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 RLSCERAGT 9
+ +CE GT
Sbjct: 338 KATCEHCGT 346
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 RLSCERAGT 9
+ +CE GT
Sbjct: 338 KATCEHCGT 346
>sp|VL2_HPV36|MINOR capsid protein L2|Human papillomavirus 36
Query: 3 SCERAGT 9
+C++AGT
Sbjct: 18 TCKQAGT 24
43|Sequence|211|220|RAGTRFNVRG
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 AGTRFNV 8
AGTRFN+
Sbjct: 1107 AGTRFNI 1113
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 AGTRFNV 8
AGTRFN+
Sbjct: 1251 AGTRFNL 1257
>sp|VE7_HPV24|PROTEIN E7|Human papillomavirus 24
Query: 2 AGTRFNVRG 10
A T+F +RG
Sbjct: 62 AATQFGIRG 70
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 1 RAGTRFNVR 9
RAG RF R
Sbjct: 474 RAGPRFKSR 482
>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)
Query: 1 RAGTRFNVRG 10
RAG N+RG
Sbjct: 200 RAGRTHNIRG 209
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 RAGTRFN 7
R G RFN
Sbjct: 1776 RCGMRFN 1782
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 3 GTRFNVRG 10
TRF +RG
Sbjct: 363 STRFEIRG 370
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 6 FNVRG 10
FNVRG
Sbjct: 864 FNVRG 868
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RAGTRFN 7
R GT FN
Sbjct: 482 RTGTSFN 488
44|Sequence|216|225|FNVRGTNDDG
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 VRGTNDDG 10
V GT DDG
Sbjct: 2107 VTGTTDDG 2114
>sp|YVCB_VACCC|UNCHARACTERIZED 8.4 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FNVRGTN 7
FN+ GTN
Sbjct: 6 FNINGTN 12
>sp|NEF_HV1Z2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 NVRGTNDD 9
N RGTN D
Sbjct: 47 NTRGTNAD 54
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 VRGTNDD 9
+RGTN+D
Sbjct: 66 LRGTNND 72
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 VRGTNDD 9
+RGTN+D
Sbjct: 66 LRGTNND 72
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 VRGTNDD 9
+RGTN+D
Sbjct: 66 LRGTNND 72
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 1 FNVRGTNDDG 10
FNV+ TN G
Sbjct: 510 FNVQTTNSAG 519
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 4 RGTNDD 9
RGTN+D
Sbjct: 4 RGTNND 9
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 RGTND 8
RGTND
Sbjct: 364 RGTND 368
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 RGTND 8
RGTND
Sbjct: 355 RGTND 359
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 GTNDDG 10
GTND G
Sbjct: 353 GTNDTG 358
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 NVRGTNDDG 10
N +GT DG
Sbjct: 1356 NAKGTVSDG 1364
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 NVRGTNDDG 10
N +GT DG
Sbjct: 1356 NAKGTVSDG 1364
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 5 GTNDDG 10
GTN+DG
Sbjct: 491 GTNNDG 496
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 FNVRGTNDD 9
++ +GTN D
Sbjct: 3050 WDTKGTNSD 3058
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 5 GTNDDG 10
GTN DG
Sbjct: 490 GTNSDG 495
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 2 NVRGTNDDG 10
N +GT DG
Sbjct: 24 NAKGTVGDG 32
45|Sequence|221|230|TNDDGHVANF
>sp|M2_I85A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 3 DDGHVAN 9
DDGH AN
Sbjct: 87 DDGHFAN 93
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 TNDDGH 6
TND GH
Sbjct: 2358 TNDSGH 2363
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 4 DGHVAN 9
DGHVAN
Sbjct: 470 DGHVAN 475
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 DGHVANF 10
DGHV F
Sbjct: 6764 DGHVETF 6770
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 DGHVANF 10
DGHV F
Sbjct: 6787 DGHVETF 6793
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 1 TNDDGHVANF 10
T DDG NF
Sbjct: 250 TFDDGSKGNF 259
>sp|ORF30_HHV8P|PROTEIN ORF30|Human herpesvirus 8 type P
Query: 3 DDGHVAN 9
D GHV N
Sbjct: 6 DPGHVVN 12
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 NDDGHV 7
ND GH+
Sbjct: 712 NDSGHI 717
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 2 NDDGHVAN 9
+DD +VAN
Sbjct: 500 DDDTYVAN 507
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 6 HVANF 10
HVANF
Sbjct: 5575 HVANF 5579
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 2 NDDGHVAN 9
+DD +VAN
Sbjct: 504 DDDTYVAN 511
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 NDDGH 6
ND+GH
Sbjct: 143 NDEGH 147
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 4 DGHVANF 10
DG V+NF
Sbjct: 498 DGFVSNF 504
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 4 DGHVANF 10
DG V+NF
Sbjct: 498 DGFVSNF 504
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 4 DGHVANF 10
DG V+NF
Sbjct: 498 DGFVSNF 504
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 4 DGHVANF 10
DG V+NF
Sbjct: 498 DGFVSNF 504
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 3 DDGHVAN 9
+DGH+A+
Sbjct: 840 EDGHLAS 846
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 4 DGHVANF 10
D HV NF
Sbjct: 167 DYHVTNF 173
>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 NDDGHVAN 9
N DGH N
Sbjct: 24 NTDGHEPN 31
>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 NDDGHVAN 9
N DGH N
Sbjct: 24 NTDGHEPN 31
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 DDGHVA 8
+DGH+A
Sbjct: 840 EDGHLA 845
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 DDGHVA 8
+DGH+A
Sbjct: 839 EDGHLA 844
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 3 DDGHVA 8
+DGH+A
Sbjct: 839 EDGHLA 844
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 3 DDGHVA 8
+DGH+A
Sbjct: 839 EDGHLA 844
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 DDGHVA 8
+DGH+A
Sbjct: 840 EDGHLA 845
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 DDGHVAN 9
+DG VAN
Sbjct: 2717 NDGRVAN 2723
>sp|ICP27_HHV7J|MRNA export factor ICP27 homolog|Human herpesvirus 7 (strain JI)
Query: 2 NDDGH 6
ND+GH
Sbjct: 242 NDNGH 246
>sp|ICP27_HHV6Z|MRNA export factor ICP27 homolog|Human herpesvirus 6B (strain Z29)
Query: 2 NDDGH 6
ND+GH
Sbjct: 234 NDNGH 238
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 DDGHVAN 9
DD ++AN
Sbjct: 532 DDAYIAN 538
>sp|ICP27_HHV6U|MRNA export factor ICP27 homolog|Human herpesvirus 6A (strain
Query: 2 NDDGH 6
ND+GH
Sbjct: 233 NDNGH 237
46|Sequence|226|235|HVANFVETEQ
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 HVANFVETE 9
H+A F E E
Sbjct: 3936 HLATFAELE 3944
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 HVANFVETE 9
H+A F E E
Sbjct: 3936 HLATFAELE 3944
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 ANFVET 8
ANF+ET
Sbjct: 780 ANFIET 785
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 ANFVET 8
ANF+ET
Sbjct: 780 ANFIET 785
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 ANFVET 8
ANF+ET
Sbjct: 780 ANFIET 785
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 VANFVETE 9
VAN VE+E
Sbjct: 574 VANTVESE 581
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 1 HVANFVETE 9
+VAN VE+E
Sbjct: 97 NVANAVESE 105
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 1 HVANFV 6
HVA+FV
Sbjct: 967 HVASFV 972
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 HVANFV 6
HVA+FV
Sbjct: 836 HVASFV 841
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 HVANFV 6
HVA+FV
Sbjct: 896 HVASFV 901
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 1 HVANFVET 8
H+AN V+T
Sbjct: 4 HLANEVQT 11
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 HVANFVET 8
HV +++ET
Sbjct: 1292 HVRSYIET 1299
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 HVANFVET 8
HV +++ET
Sbjct: 1292 HVRSYIET 1299
47|Sequence|231|240|VETEQVVYLD
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 VETEQVVYL 9
V+T+Q++Y+
Sbjct: 706 VQTQQIMYV 714
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 VETEQVVYL 9
+ TEQ +YL
Sbjct: 2657 IRTEQDIYL 2665
>sp|VL2_HPV03|MINOR capsid protein L2|Human papillomavirus 3
Query: 1 VETEQVVYLD 10
V+T VY+D
Sbjct: 431 VDTTHYVYID 440
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 VETEQVVYL 9
V+T Q++Y+
Sbjct: 705 VQTHQIMYV 713
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 VETEQVVYL 9
V+T Q++Y+
Sbjct: 707 VQTHQIMYV 715
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 VETEQVVYL 9
V+T Q++Y+
Sbjct: 707 VQTHQIMYV 715
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 1 VETEQVVY 8
VETEQ+ +
Sbjct: 138 VETEQMAH 145
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 VETEQVVYL 9
+ TE+ +YL
Sbjct: 2675 IRTEESIYL 2683
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 VETEQVVYL 9
+ TE+ +YL
Sbjct: 2679 IRTEESIYL 2687
>sp|VP6_ROTGA|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 VETEQVVYLD 10
+ETE +Y D
Sbjct: 151 IETENPLYAD 160
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 VETEQVVYL 9
++TE+ VYL
Sbjct: 2658 IKTERDVYL 2666
48|Sequence|236|245|VVYLDDSVSS
>sp|GE_HHV2H|ENVELOPE glycoprotein E|Human herpesvirus 2 (strain HG52)
Query: 1 VVYLDDSVSS 10
VVY+DD + +
Sbjct: 355 VVYVDDHIHA 364
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 VVYLDDSVSS 10
VVY DD +S+
Sbjct: 1270 VVYGDDRLST 1279
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 VVYLDDSVSS 10
VVY DD +S+
Sbjct: 1269 VVYGDDRLST 1278
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 VVYLDDSVSS 10
VVY DD +S+
Sbjct: 1268 VVYGDDRLST 1277
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 VVYLDDSVSS 10
VVY DD +S+
Sbjct: 1289 VVYGDDRLST 1298
>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P
Query: 4 LDDSVSS 10
L+DSVSS
Sbjct: 15 LEDSVSS 21
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 3 YLDDSV 8
Y+DDS+
Sbjct: 352 YIDDSI 357
>sp|UL67_HCMVA|UNCHARACTERIZED protein UL67|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VVYLDDSV 8
++Y DDSV
Sbjct: 11 IIYSDDSV 18
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 1 VVYLDDSVSS 10
+ ++DDSV S
Sbjct: 48 IEFIDDSVQS 57
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 VYLDDSVS 9
VY+ DSV+
Sbjct: 492 VYVSDSVT 499
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 2 VYLDDSVS 9
VY+ DSV+
Sbjct: 491 VYISDSVT 498
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 VYLDDSVS 9
VY+ DSV+
Sbjct: 492 VYVSDSVT 499
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 VYLDDSVS 9
VY+ DSV+
Sbjct: 492 VYVSDSVT 499
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 VYLDDSVS 9
VY+ DSV+
Sbjct: 492 VYVSDSVT 499
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 VYLDDSVS 9
VY+ DSV+
Sbjct: 492 VYVSDSVT 499
49|Sequence|241|250|DSVSSFIQIR
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 SVSSFIQIR 10
++S+F+QIR
Sbjct: 251 TLSNFVQIR 259
>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 SVSSFIQIR 10
++S+F+QIR
Sbjct: 251 TLSNFVQIR 259
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DSVSSFIQ 8
DSV SF+Q
Sbjct: 366 DSVESFLQ 373
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DSVSSFIQ 8
DSV SF+Q
Sbjct: 366 DSVESFLQ 373
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 DSVSSFIQIR 10
D +S+F Q+R
Sbjct: 903 DQISAFEQVR 912
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 1 DSVSSFIQ 8
DSV FIQ
Sbjct: 366 DSVEGFIQ 373
>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DSVSSFIQ 8
DSV FIQ
Sbjct: 366 DSVEGFIQ 373
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 2 SVSSFIQIR 10
+VSSF+Q R
Sbjct: 154 NVSSFLQNR 162
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 1 DSVSSFIQ 8
DSV+ FI+
Sbjct: 946 DSVTKFIE 953
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 1 DSVSSFIQ 8
DSV+ FI+
Sbjct: 946 DSVTKFIE 953
50|Sequence|246|255|FIQIRGSVPL
>sp|HEMA_INBVM|HEMAGGLUTININ B virus (strain B/Victoria/19/1989)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 298 IKGSLPL 304
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 298 IKGSLPL 304
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 291 IKGSLPL 297
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 289 IKGSLPL 295
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 296 IKGSLPL 302
>sp|HEMA_INBP3|HEMAGGLUTININ B virus (strain B/Paris/329/1990)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 298 IKGSLPL 304
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 296 IKGSLPL 302
>sp|HEMA_INBNA|HEMAGGLUTININ B virus (strain B/Nagasaki/1/1987)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 283 IKGSLPL 289
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 291 IKGSLPL 297
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 287 IKGSLPL 293
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 297 IKGSLPL 303
>sp|HEMA_INBIN|HEMAGGLUTININ B virus (strain B/India/3/1989)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 298 IKGSLPL 304
>sp|HEMA_INBF9|HEMAGGLUTININ B virus (strain B/Finland/151/1990)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 283 IKGSLPL 289
>sp|HEMA_INBF8|HEMAGGLUTININ B virus (strain B/Finland/150/1990)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 283 IKGSLPL 289
>sp|HEMA_INBF7|HEMAGGLUTININ B virus (strain B/Finland/149/1990)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 283 IKGSLPL 289
>sp|HEMA_INBF6|HEMAGGLUTININ B virus (strain B/Finland/148/1990)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 283 IKGSLPL 289
>sp|HEMA_INBF5|HEMAGGLUTININ B virus (strain B/Finland/147/1990)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 283 IKGSLPL 289
>sp|HEMA_INBF4|HEMAGGLUTININ B virus (strain B/Finland/146/1990)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 283 IKGSLPL 289
>sp|HEMA_INBF3|HEMAGGLUTININ B virus (strain B/Finland/145/1990)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 283 IKGSLPL 289
>sp|HEMA_INBF2|HEMAGGLUTININ B virus (strain B/Finland/56/1988)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 283 IKGSLPL 289
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 296 IKGSLPL 302
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 288 IKGSLPL 294
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 298 IKGSLPL 304
>sp|HEMA_INBYB|HEMAGGLUTININ B virus (strain B/Yamagata/16/1988)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 281 IKGSLPL 287
>sp|HEMA_INBFU|HEMAGGLUTININ B virus (strain B/Fukuoka/80/1981)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 281 IKGSLPL 287
>sp|HEMA_INBVL|HEMAGGLUTININ B virus (strain B/Victoria/103/1989)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 296 IKGSLPL 302
>sp|HEMA_INBP9|HEMAGGLUTININ B virus (strain B/Panama/45/1990)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 296 IKGSLPL 302
>sp|HEMA_INBHM|HEMAGGLUTININ B virus (strain B/Hong
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 296 IKGSLPL 302
>sp|HEMA_INBHL|HEMAGGLUTININ B virus (strain B/Hong
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 296 IKGSLPL 302
>sp|HEMA_INBF1|HEMAGGLUTININ B virus (strain B/Finland/24/1985)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 283 IKGSLPL 289
>sp|HEMA_INBAA|HEMAGGLUTININ B virus (strain B/Ann
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 290 IKGSLPL 296
>sp|HEMA_INBNY|HEMAGGLUTININ B virus (strain B/New
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 296 IKGSLPL 302
>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 296 IKGSLPL 302
>sp|HEMA_INBBK|HEMAGGLUTININ B virus (strain B/Bangkok/163/1990)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 296 IKGSLPL 302
>sp|HEMA_INBTF|HEMAGGLUTININ B virus (strain B/Texas/4/1990)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 296 IKGSLPL 302
>sp|HEMA_INBSD|HEMAGGLUTININ B virus (strain B/South
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 296 IKGSLPL 302
>sp|HEMA_INBTE|HEMAGGLUTININ B virus (strain B/Texas/1/1991)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 296 IKGSLPL 302
>sp|HEMA_INBGL|HEMAGGLUTININ B virus (strain B/GL/1954)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 291 IKGSLPL 297
>sp|HEMA_INBSJ|HEMAGGLUTININ B virus (strain B/Singapore/1964)
Query: 4 IRGSVPL 10
I+GS+PL
Sbjct: 293 IKGSLPL 299
>sp|UL16P_HCMVA|PROTEIN UL16|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 RGSVPL 10
RG+VPL
Sbjct: 5 RGTVPL 10
>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 1 FIQIRGSVPL 10
+I+ +GS PL
Sbjct: 425 YIKRQGSTPL 434
>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 1 FIQIRGSVPL 10
+I+ +GS PL
Sbjct: 425 YIKRQGSTPL 434
>sp|UL16P_HCMVM|PROTEIN UL16|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 RGSVPL 10
RG+VPL
Sbjct: 5 RGTVPL 10
51|Sequence|251|260|GSVPLFWEQP
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 PLFWE 8
PLFWE
Sbjct: 2958 PLFWE 2962
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 5 LFWEQP 10
LFWE+P
Sbjct: 1127 LFWEEP 1132
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 1 GSVPLFW 7
G++PL W
Sbjct: 354 GAIPLMW 360
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 GSVPLFW 7
G++PL W
Sbjct: 354 GAIPLMW 360
>sp|UL16P_HCMVA|PROTEIN UL16|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GSVPLFW 7
G+VPL W
Sbjct: 6 GTVPLGW 12
>sp|UL16P_HCMVM|PROTEIN UL16|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GSVPLFW 7
G+VPL W
Sbjct: 6 GTVPLGW 12
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 2 SVPLFWEQ 9
SVP FW +
Sbjct: 830 SVPFFWRR 837
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 2 SVPLFWEQ 9
SVP FW +
Sbjct: 830 SVPFFWRR 837
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 2 SVPLFWEQ 9
SVP FW +
Sbjct: 830 SVPFFWRR 837
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 4 PLFWEQ 9
PLFW Q
Sbjct: 763 PLFWLQ 768
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 4 PLFWEQ 9
PLFW Q
Sbjct: 763 PLFWLQ 768
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 4 PLFWEQ 9
PLFW Q
Sbjct: 763 PLFWLQ 768
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 4 PLFWEQ 9
PLFW Q
Sbjct: 764 PLFWLQ 769
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 4 PLFWEQ 9
PLFW Q
Sbjct: 764 PLFWLQ 769
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 PLFWEQ 9
PLFW Q
Sbjct: 764 PLFWLQ 769
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GSVPLFWE 8
G +PL WE
Sbjct: 754 GFLPLVWE 761
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 2 SVPLFWE 8
++PL WE
Sbjct: 355 ALPLIWE 361
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 4 PLFWEQ 9
PLFW Q
Sbjct: 764 PLFWLQ 769
>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)
Query: 1 GSVPLFW 7
GS P +W
Sbjct: 286 GSAPSYW 292
>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 1 GSVPLFW 7
GS P +W
Sbjct: 286 GSAPSYW 292
>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])
Query: 1 GSVPLFW 7
GS P +W
Sbjct: 286 GSAPSYW 292
>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)
Query: 1 GSVPLFW 7
GS P +W
Sbjct: 286 GSAPSYW 292
>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)
Query: 1 GSVPLFW 7
GS P +W
Sbjct: 286 GSAPSYW 292
>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])
Query: 1 GSVPLFW 7
GS P +W
Sbjct: 286 GSAPSYW 292
>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])
Query: 1 GSVPLFW 7
GS P +W
Sbjct: 286 GSAPSYW 292
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 1 GSVPLFW 7
GS P +W
Sbjct: 286 GSAPSYW 292
>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])
Query: 1 GSVPLFW 7
GS P +W
Sbjct: 286 GSAPSYW 292
>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 1 GSVPLFW 7
GS P +W
Sbjct: 286 GSAPSYW 292
>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])
Query: 1 GSVPLFW 7
GS P +W
Sbjct: 286 GSAPSYW 292
>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)
Query: 1 GSVPLFW 7
GS P +W
Sbjct: 286 GSAPSYW 292
>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])
Query: 1 GSVPLFW 7
GS P +W
Sbjct: 286 GSAPSYW 292
>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])
Query: 1 GSVPLFW 7
GS P +W
Sbjct: 286 GSAPSYW 292
>sp|VL2_HPV49|MINOR capsid protein L2|Human papillomavirus type 49
Query: 4 PLFWEQP 10
PLF +QP
Sbjct: 278 PLFLQQP 284
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 6 FWEQP 10
+WE+P
Sbjct: 816 YWEEP 820
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 2 SVPLFWEQ 9
S P FW Q
Sbjct: 765 SQPFFWVQ 772
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 2 SVPLFWEQ 9
S P FW Q
Sbjct: 765 SQPFFWVQ 772
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 2 SVPLFWEQ 9
S P FW Q
Sbjct: 765 SQPFFWVQ 772
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 5 LFWEQP 10
+FW QP
Sbjct: 61 VFWNQP 66
>sp|UL06_HCMVM|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GSVPLFW 7
GS P+ W
Sbjct: 108 GSTPVLW 114
>sp|UL06_HCMVA|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GSVPLFW 7
GS P+ W
Sbjct: 112 GSTPVLW 118
>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GSVPLFW 7
GS P +W
Sbjct: 127 GSEPCYW 133
>sp|VU3_HHV6Z|PROTEIN U3|Human herpesvirus 6B (strain Z29)
Query: 1 GSVPLFW 7
GS P +W
Sbjct: 140 GSEPAYW 146
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 1 GSVPLFW 7
GS+ LFW
Sbjct: 564 GSLTLFW 570
>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)
Query: 3 VPLFW 7
+PLFW
Sbjct: 637 IPLFW 641
>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)
Query: 3 VPLFW 7
+PLFW
Sbjct: 635 IPLFW 639
>sp|VL2_HPV47|MINOR capsid protein L2|Human papillomavirus 47
Query: 4 PLFWEQP 10
PLF QP
Sbjct: 279 PLFLSQP 285
>sp|VL2_HPV25|MINOR capsid protein L2|Human papillomavirus 25
Query: 4 PLFWEQP 10
PLF QP
Sbjct: 277 PLFLSQP 283
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 PLFWE 8
P FWE
Sbjct: 2936 PKFWE 2940
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 PLFWE 8
P FWE
Sbjct: 2958 PRFWE 2962
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 PLFWE 8
P FWE
Sbjct: 2958 PRFWE 2962
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 PLFWE 8
P FWE
Sbjct: 2958 PRFWE 2962
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 PLFWE 8
P FWE
Sbjct: 2936 PKFWE 2940
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 4 PLFWE 8
P FWE
Sbjct: 2936 PKFWE 2940
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 5 LFWEQP 10
L WE P
Sbjct: 1268 LLWEMP 1273
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 4 PLFWE 8
P FWE
Sbjct: 2936 PKFWE 2940
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 4 PLFWE 8
P FWE
Sbjct: 2936 PKFWE 2940
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 4 PLFWE 8
P FWE
Sbjct: 2960 PRFWE 2964
52|Sequence|256|265|FWEQPGLQVG
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 FWEQPGLQVG 10
F QPGL++G
Sbjct: 2031 FQTQPGLELG 2040
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 FWEQPGLQVG 10
F QPGL++G
Sbjct: 2030 FQTQPGLELG 2039
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 1 FWEQPGLQVG 10
F QPGL++G
Sbjct: 2030 FQTQPGLELG 2039
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 FWEQPGLQVG 10
F QPGL++G
Sbjct: 2030 FQTQPGLELG 2039
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 FWEQPGLQVG 10
F QPGL++G
Sbjct: 2028 FQTQPGLELG 2037
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 FWEQPGLQV 9
F +QP LQV
Sbjct: 3149 FEDQPNLQV 3157
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 FWEQPGLQV 9
F +QP LQV
Sbjct: 3149 FEDQPNLQV 3157
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 1 FWEQPG 6
+W QPG
Sbjct: 160 YWLQPG 165
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 1 FWEQPG 6
+W QPG
Sbjct: 159 YWLQPG 164
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 FWEQPGLQV 9
F +QP LQV
Sbjct: 3124 FDDQPSLQV 3132
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 FWEQPGLQV 9
F +QP LQV
Sbjct: 3124 FDDQPSLQV 3132
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 WEQPGLQVG 10
WE LQVG
Sbjct: 707 WEHALLQVG 715
>sp|TAT_HV196|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 WEQPGLQ 8
W QPG Q
Sbjct: 11 WNQPGSQ 17
>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12
Query: 3 EQPGLQVG 10
E PG++VG
Sbjct: 74 EGPGIRVG 81
>sp|REV_HV2EH|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 2 WEQPGLQV 9
W+Q GLQ+
Sbjct: 41 WKQRGLQI 48
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 4 QPGLQV 9
QPG+QV
Sbjct: 114 QPGMQV 119
>sp|VL2_HPV36|MINOR capsid protein L2|Human papillomavirus 36
Query: 3 EQPGLQVG 10
E PG++VG
Sbjct: 74 EGPGIRVG 81
>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8
Query: 3 EQPGLQVG 10
E PG++VG
Sbjct: 74 EGPGIRVG 81
>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b
Query: 3 EQPGLQVG 10
E PG++VG
Sbjct: 74 EGPGVRVG 81
>sp|VL2_HPV47|MINOR capsid protein L2|Human papillomavirus 47
Query: 3 EQPGLQVG 10
E PG++VG
Sbjct: 74 EGPGVRVG 81
>sp|VL2_HPV15|MINOR capsid protein L2|Human papillomavirus 15
Query: 3 EQPGLQVG 10
E PG++VG
Sbjct: 74 EGPGVRVG 81
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 2 WEQPG 6
WE PG
Sbjct: 1051 WEAPG 1055
>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5
Query: 3 EQPGLQVG 10
E PG++VG
Sbjct: 74 EGPGVRVG 81
>sp|VL2_HPV09|MINOR capsid protein L2|Human papillomavirus 9
Query: 3 EQPGLQVG 10
E PG++VG
Sbjct: 74 EGPGVRVG 81
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 WEQPGL 7
W PGL
Sbjct: 1275 WNDPGL 1280
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 WEQPGL 7
W PGL
Sbjct: 1275 WNDPGL 1280
>sp|TAT_HV197|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 WEQPGLQ 8
W QPG Q
Sbjct: 11 WNQPGSQ 17
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WAQPG 80
>sp|VL2_HPV17|MINOR capsid protein L2|Human papillomavirus 17
Query: 3 EQPGLQVG 10
E PG++VG
Sbjct: 74 EGPGVRVG 81
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 2 WEQPGLQVG 10
W+ GL+VG
Sbjct: 99 WKLVGLEVG 107
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WAQPG 80
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WAQPG 80
>sp|VL2_HPV37|MINOR capsid protein L2|Human papillomavirus 37
Query: 3 EQPGLQVG 10
E PG++VG
Sbjct: 74 EGPGVRVG 81
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WAQPG 80
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WAQPG 80
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WAQPG 80
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WAQPG 80
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WAQPG 80
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WAQPG 80
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 2 WEQPG 6
W++PG
Sbjct: 137 WQRPG 141
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 2 WEQPG 6
W++PG
Sbjct: 137 WQRPG 141
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WAQPG 80
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WAQPG 80
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WAQPG 80
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WAQPG 80
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WAQPG 80
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WAQPG 80
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WAQPG 80
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WAQPG 80
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WAQPG 80
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WAQPG 80
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WAQPG 80
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WAQPG 80
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 WEQP 5
WEQP
Sbjct: 719 WEQP 722
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WAQPG 80
>sp|TAT_HV1ET|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 WEQPGLQ 8
W PG Q
Sbjct: 11 WNHPGSQ 17
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 WEQP 5
WEQP
Sbjct: 719 WEQP 722
>sp|TAT_HV1C4|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 WEQPGLQ 8
W+ PG Q
Sbjct: 11 WKHPGSQ 17
>sp|TAT_HV1H3|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 WEQPGLQ 8
W+ PG Q
Sbjct: 11 WKHPGSQ 17
>sp|TAT_HV1B1|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 WEQPGLQ 8
W+ PG Q
Sbjct: 11 WKHPGSQ 17
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WAQPG 80
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WAQPG 80
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 EQPGLQVG 10
E+PGL+ G
Sbjct: 2522 EKPGLKRG 2529
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 EQPGLQVG 10
E+PGL+ G
Sbjct: 2519 EKPGLKRG 2526
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 EQPGLQVG 10
E+PGL+ G
Sbjct: 2522 EKPGLKRG 2529
>sp|TAT_HV1S3|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 WEQPGLQ 8
W+ PG Q
Sbjct: 11 WKHPGSQ 17
>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 QPGLQVG 10
QP LQ G
Sbjct: 65 QPALQTG 71
>sp|TAT_HV1B9|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 WEQPGLQ 8
W+ PG Q
Sbjct: 11 WKHPGSQ 17
>sp|TAT_HV1OY|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 WEQPGLQ 8
W+ PG Q
Sbjct: 11 WKHPGSQ 17
>sp|TAT_HV1AN|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 WEQPGLQ 8
W PG Q
Sbjct: 11 WHHPGSQ 17
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WGQPG 80
>sp|TEG7_EBVG|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 PGLQVG 10
PG+QVG
Sbjct: 49 PGVQVG 54
>sp|TEG7_EBVB9|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 PGLQVG 10
PG+QVG
Sbjct: 49 PGVQVG 54
>sp|TEG7_EBVA8|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 PGLQVG 10
PG+QVG
Sbjct: 49 PGVQVG 54
>sp|TAT_HV1JR|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 WEQPGLQ 8
W+ PG Q
Sbjct: 11 WKHPGSQ 17
>sp|TAT_HV1SC|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 WEQPGLQ 8
W+ PG Q
Sbjct: 11 WKHPGSQ 17
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WGQPG 80
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WGQPG 80
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WGQPG 80
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WGQPG 80
>sp|TAT_HV1H2|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 WEQPGLQ 8
W+ PG Q
Sbjct: 11 WKHPGSQ 17
>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 QPGLQVG 10
QP LQ G
Sbjct: 65 QPALQTG 71
>sp|GAG_HV1ET|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 QPGLQVG 10
QP LQ G
Sbjct: 65 QPALQTG 71
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 5 PGLQVG 10
PG QVG
Sbjct: 270 PGAQVG 275
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 QPGLQVG 10
QP LQ G
Sbjct: 65 QPALQTG 71
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 2 WEQPG 6
W QPG
Sbjct: 76 WAQPG 80
53|Sequence|261|270|GLQVGSHRVR
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 GLQVGSHRVR 10
GL++ SHR R
Sbjct: 118 GLKISSHRDR 127
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR++
Sbjct: 781 LEIGQHRIK 789
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 774 LEIGQHRTK 782
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 777 LEIGQHRTK 785
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 785 LEIGQHRTK 793
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 779 LEIGQHRTK 787
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 776 LEIGQHRAK 784
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 780 LEIGQHRAK 788
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 778 LEIGQHRAK 786
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 784 LEIGQHRTK 792
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 781 LEIGQHRTK 789
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 775 LEIGQHRTK 783
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 792 LEIGQHRTK 800
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 782 LEIGQHRTK 790
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 780 LEIGQHRTK 788
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 780 LEIGQHRTK 788
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 780 LEIGQHRTK 788
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 780 LEIGQHRTK 788
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 792 LEIGQHRTK 800
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 775 LEIGQHRTK 783
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 780 LEIGQHRTK 788
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 792 LEIGQHRTK 800
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 780 LEIGQHRAK 788
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 773 LEIGQHRAK 781
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 780 LEIGQHRAK 788
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 786 LEIGQHRAK 794
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 775 LEIGQHRAK 783
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHRVR 10
L++G HR +
Sbjct: 779 LEIGQHRAK 787
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 GLQVGSHR 8
G Q+G HR
Sbjct: 1221 GGQIGQHR 1228
>sp|NCAP_BUNLC|NUCLEOPROTEIN La Crosse
Query: 2 LQVGSHRVR 10
L +G HRV+
Sbjct: 161 LTIGIHRVK 169
>sp|NCAP_BUNL8|NUCLEOPROTEIN La Crosse (isolate Human/United
Query: 2 LQVGSHRVR 10
L +G HRV+
Sbjct: 161 LTIGIHRVK 169
>sp|TR14_HCMVA|PROTEIN TRL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GLQVGSHRV 9
L +GSHR+
Sbjct: 157 ALYMGSHRI 165
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 QVGSHRV 9
+VGSH+V
Sbjct: 57 EVGSHQV 63
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 QVGSHRV 9
+VGSH+V
Sbjct: 57 EVGSHQV 63
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 QVGSHRV 9
+VGSH+V
Sbjct: 57 EVGSHQV 63
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 1 GLQVGS 6
GLQ+GS
Sbjct: 190 GLQIGS 195
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHR 8
L++G HR
Sbjct: 784 LEIGQHR 790
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LQVGSHR 8
L++G HR
Sbjct: 781 LEIGQHR 787
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 QVGSHRV 9
+VGSH++
Sbjct: 57 EVGSHQI 63
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 QVGSHRV 9
+VGSH++
Sbjct: 57 EVGSHQI 63
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 QVGSHRV 9
+VGSH++
Sbjct: 57 EVGSHQI 63
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 QVGSHRV 9
+VGSH++
Sbjct: 57 EVGSHQI 63
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 QVGSHRV 9
+VGSH++
Sbjct: 57 EVGSHQI 63
54|Sequence|266|275|SHRVRMSRGF
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 HRVRMSRG 9
H+VR+ RG
Sbjct: 524 HQVRVERG 531
>sp|TRX1_HHV8P|TRIPLEX capsid protein 1|Human herpesvirus 8 type P
Query: 1 SHRVRMSRG 9
+HRV ++RG
Sbjct: 23 THRVSLTRG 31
>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SHRVRMSRGF 10
SH+V +SR +
Sbjct: 262 SHKVSLSRTY 271
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 HRVRMSRG 9
HRVRM G
Sbjct: 3360 HRVRMLIG 3367
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 3 RVRMSRGF 10
RVR +GF
Sbjct: 436 RVRSKKGF 443
55|Sequence|271|280|MSRGFEANAP
>sp|HEMA_I96A3|HEMAGGLUTININ A virus (strain A/China:Nanchang/11/1996
Query: 1 MSRGFE-----ANAP 10
+SRGFE +NAP
Sbjct: 273 LSRGFESGIITSNAP 287
>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P
Query: 3 RGFEANAP 10
RGF+ N P
Sbjct: 48 RGFQGNMP 55
>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933
Query: 1 MSRGFEA 7
+SRGFE+
Sbjct: 273 LSRGFES 279
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 SRGFEANAP 10
+R FEAN P
Sbjct: 919 ARWFEANRP 927
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 SRGFEANAP 10
+R FEAN P
Sbjct: 919 ARWFEANRP 927
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 SRGFEANAP 10
+R FEAN P
Sbjct: 919 ARWFEANRP 927
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 SRGFEANAP 10
+R FEAN P
Sbjct: 919 ARWFEANRP 927
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 SRGFEANAP 10
+R FEAN P
Sbjct: 919 ARWFEANRP 927
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 1 MSRGFEAN 8
+SR +EAN
Sbjct: 97 LSRAYEAN 104
>sp|GL_HHV7J|ENVELOPE glycoprotein L|Human herpesvirus 7 (strain JI)
Query: 4 GFEANAP 10
GFE N P
Sbjct: 160 GFEFNIP 166
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 2 SRGFEANAP 10
+R FE+N P
Sbjct: 917 ARWFESNRP 925
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 1 MSRGFEAN 8
+SR +EAN
Sbjct: 99 LSRTYEAN 106
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 5 FEANAP 10
FEAN P
Sbjct: 937 FEANKP 942
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 5 FEANAP 10
FEAN P
Sbjct: 937 FEANKP 942
56|Sequence|276|285|EANAPAFDRH
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 1 EANAPAFDRH 10
E +AP F RH
Sbjct: 26 ELSAPTFTRH 35
>sp|ATI_VAR67|A-TYPE inclusion protein A25 homolog|Variola virus (isolate
Query: 1 EANAPAFDRH 10
+ PA+D+H
Sbjct: 327 DEEVPAYDKH 336
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 ANAPAFDRH 10
++ PAFDR
Sbjct: 1635 SSPPAFDRQ 1643
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 ANAPAFDRH 10
++ PAFDR
Sbjct: 1635 SSPPAFDRQ 1643
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 5 PAFDRH 10
PAFD+H
Sbjct: 834 PAFDQH 839
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 4 APAFDRH 10
APA+ RH
Sbjct: 787 APAWARH 793
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 4 APAFDRH 10
APA+ RH
Sbjct: 787 APAWARH 793
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 EANAPAFDRH 10
+ PA+D+H
Sbjct: 328 DEEVPAYDKH 337
>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P
Query: 1 EANAPAFDRH 10
+ N P++ RH
Sbjct: 51 QGNMPSWARH 60
>sp|NSP2_ROTJ1|NON-STRUCTURAL protein 2|Rotavirus X (strain
Query: 3 NAPAFDR 9
N PA DR
Sbjct: 24 NCPALDR 30
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 NAPAFDR 9
NAP DR
Sbjct: 1401 NAPLIDR 1407
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 NAPAFDR 9
NAP DR
Sbjct: 1401 NAPLIDR 1407
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 NAPAFDR 9
NAP DR
Sbjct: 1401 NAPLIDR 1407
>sp|NSP2_ROTB2|NON-STRUCTURAL protein 2|Rotavirus X (isolate
Query: 3 NAPAFDR 9
N PA DR
Sbjct: 24 NCPALDR 30
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 ANAPAFD 8
A AP+FD
Sbjct: 389 ATAPSFD 395
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 ANAPAFD 8
A AP+FD
Sbjct: 390 ATAPSFD 396
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 ANAPAFD 8
A AP+FD
Sbjct: 389 ATAPSFD 395
57|Sequence|281|290|AFDRHFRTLK
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 2 FDRHFRTL 9
F+RH R L
Sbjct: 136 FERHLRGL 143
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 2 FDRHFRTL 9
F+RH R L
Sbjct: 146 FERHLRGL 153
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 AFDRHFR 7
AFD+H R
Sbjct: 835 AFDQHTR 841
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 FDRHFR 7
FDR+F+
Sbjct: 4675 FDRYFK 4680
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 FDRHFR 7
FDR+F+
Sbjct: 4652 FDRYFK 4657
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 2 FDRHF 6
FD+HF
Sbjct: 265 FDQHF 269
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 FDRHFRT 8
FD HF T
Sbjct: 610 FDLHFPT 616
58|Sequence|286|295|FRTLKNLYGK
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 1 FRTLKNLY 8
FRTLK LY
Sbjct: 210 FRTLKTLY 217
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 1 FRTLKNLY 8
FRTLK LY
Sbjct: 210 FRTLKTLY 217
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 1 FRTLKNLY 8
FRTLK LY
Sbjct: 210 FRTLKTLY 217
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 1 FRTLKNLY 8
FRTLK LY
Sbjct: 210 FRTLKTLY 217
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 RTLKNLYG 9
RTLK++YG
Sbjct: 995 RTLKSVYG 1002
>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 FRTLKNL 7
F+TLKNL
Sbjct: 724 FKTLKNL 730
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 FRTLKNL 7
F+TLKNL
Sbjct: 723 FKTLKNL 729
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 FRTLKNL 7
F+TLKNL
Sbjct: 724 FKTLKNL 730
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 FRTLKNL 7
F+TLKNL
Sbjct: 723 FKTLKNL 729
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 FRTLKNL 7
F+TLKNL
Sbjct: 723 FKTLKNL 729
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 1 FRTLKNL 7
F+TLKNL
Sbjct: 723 FKTLKNL 729
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 FRTLKNL 7
F+TLKNL
Sbjct: 723 FKTLKNL 729
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 FRTLKNL 7
F+TLKNL
Sbjct: 724 FKTLKNL 730
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 FRTLKNL 7
F+TLKNL
Sbjct: 724 FKTLKNL 730
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 FRTLKNL 7
F+TLKNL
Sbjct: 724 FKTLKNL 730
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 FRTLKNL 7
F+TLKNL
Sbjct: 723 FKTLKNL 729
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 FRTLKNL 7
F+TLKNL
Sbjct: 723 FKTLKNL 729
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 FRTLKN 6
FRTLKN
Sbjct: 2001 FRTLKN 2006
>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 FRTLKNL 7
F+TLKNL
Sbjct: 723 FKTLKNL 729
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 FRTLKNL 7
F+TLKNL
Sbjct: 723 FKTLKNL 729
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 FRTLKNL 7
F+TLKNL
Sbjct: 723 FKTLKNL 729
>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 1 FRTLKNL 7
F+TLKNL
Sbjct: 723 FKTLKNL 729
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 FRTLKNL 7
F+TLKNL
Sbjct: 723 FKTLKNL 729
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 FRTLKNL 7
F+TLKNL
Sbjct: 723 FKTLKNL 729
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 FRTLKNL 7
F+TLKNL
Sbjct: 723 FKTLKNL 729
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 FRTLKNL 7
F+TLKNL
Sbjct: 723 FKTLKNL 729
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 FRTLKNL 7
F+TLKNL
Sbjct: 723 FKTLKNL 729
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 FRTLKNL 7
F+TLKNL
Sbjct: 723 FKTLKNL 729
>sp|PHOSP_CHAV|PHOSPHOPROTEIN virus (strain I653514) (CHPV)
Query: 3 TLKNLYG 9
TL+NL+G
Sbjct: 243 TLRNLFG 249
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 RTLKNLYG 9
RTL ++YG
Sbjct: 687 RTLNSMYG 694
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 RTLKNLYG 9
RTL ++YG
Sbjct: 687 RTLNSMYG 694
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 RTLKNLYG 9
RTL ++YG
Sbjct: 687 RTLNSMYG 694
>sp|HEMA_INBVL|HEMAGGLUTININ B virus (strain B/Victoria/103/1989)
Query: 4 LKNLYG 9
+KNLYG
Sbjct: 214 MKNLYG 219
>sp|HEMA_INBTF|HEMAGGLUTININ B virus (strain B/Texas/4/1990)
Query: 4 LKNLYG 9
+KNLYG
Sbjct: 214 MKNLYG 219
>sp|HEMA_INBP9|HEMAGGLUTININ B virus (strain B/Panama/45/1990)
Query: 4 LKNLYG 9
+KNLYG
Sbjct: 214 MKNLYG 219
>sp|HEMA_INBNY|HEMAGGLUTININ B virus (strain B/New
Query: 4 LKNLYG 9
+KNLYG
Sbjct: 214 MKNLYG 219
>sp|HEMA_INBHM|HEMAGGLUTININ B virus (strain B/Hong
Query: 4 LKNLYG 9
+KNLYG
Sbjct: 214 MKNLYG 219
>sp|HEMA_INBHL|HEMAGGLUTININ B virus (strain B/Hong
Query: 4 LKNLYG 9
+KNLYG
Sbjct: 214 MKNLYG 219
>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)
Query: 4 LKNLYG 9
+KNLYG
Sbjct: 214 MKNLYG 219
>sp|HEMA_INBYB|HEMAGGLUTININ B virus (strain B/Yamagata/16/1988)
Query: 4 LKNLYG 9
+KNLYG
Sbjct: 199 MKNLYG 204
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 FRTLKNL 7
F+T+KNL
Sbjct: 720 FKTIKNL 726
>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 FRTLKNLYG 9
F +LK+L+G
Sbjct: 487 FASLKSLFG 495
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 FRTLKNLYG 9
F +LK+L+G
Sbjct: 487 FASLKSLFG 495
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 RTLKNLYG 9
RTL +YG
Sbjct: 686 RTLNRMYG 693
>sp|PG053_VACCP|EFC-ASSOCIATED protein OPG053|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 FRTLKNLY 8
F+TL NL+
Sbjct: 7 FKTLYNLF 14
>sp|PG053_VACCC|EFC-ASSOCIATED protein OPG053|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FRTLKNLY 8
F+TL NL+
Sbjct: 7 FKTLYNLF 14
>sp|PG053_MONPV|EFC-ASSOCIATED protein OPG053|Monkeypox virus (MPXV)
Query: 1 FRTLKNLY 8
F+TL NL+
Sbjct: 7 FKTLYNLF 14
>sp|PG053_VARV|EFC-ASSOCIATED protein OPG053|Variola virus
Query: 1 FRTLKNLY 8
F+TL NL+
Sbjct: 7 FKTLYNLF 14
>sp|PG053_VAR67|EFC-ASSOCIATED protein OPG053|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 FRTLKNLY 8
F+TL NL+
Sbjct: 7 FKTLYNLF 14
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 1 FRTLKNLYG 9
+RT KNL+
Sbjct: 760 YRTDKNLFA 768
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 4 LKNLYGK 10
++NL+GK
Sbjct: 2284 IRNLFGK 2290
>sp|VE6_HPV34|PROTEIN E6|Human papillomavirus type 34
Query: 2 RTLKNLYGK 10
RTL+NL K
Sbjct: 87 RTLENLTNK 95
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 KNLYG 9
KNLYG
Sbjct: 393 KNLYG 397
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 KNLYG 9
KNLYG
Sbjct: 393 KNLYG 397
>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 RTLKNLYG 9
+ +KN YG
Sbjct: 23 KVIKNYYG 30
59|Sequence|291|300|NLYGKQIIVN
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 NLYGKQII 8
NL+GK +I
Sbjct: 2286 NLFGKSLI 2293
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 YGKQIIVN 10
YG+ ++VN
Sbjct: 1137 YGESVLVN 1144
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 YGKQIIVN 10
YG+ ++VN
Sbjct: 1137 YGESVLVN 1144
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 LYGKQI 7
L+GKQI
Sbjct: 411 LFGKQI 416
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 NLYGKQI 7
NLY KQ+
Sbjct: 1140 NLYEKQV 1146
>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P
Query: 1 NLYGKQI 7
N YGK+I
Sbjct: 100 NRYGKKI 106
>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)
Query: 1 NLYGKQIIVN 10
N+Y KQI+++
Sbjct: 188 NVYFKQIMLH 197
60|Sequence|296|305|QIIVNLLGSK
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain
Query: 2 IIVNLLGS 9
+ VNLLGS
Sbjct: 4 VYVNLLGS 11
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 IIVNLLGS 9
+ VNLLGS
Sbjct: 4 VYVNLLGS 11
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 IIVNLLGSK 10
+IVNL+ SK
Sbjct: 1323 VIVNLMMSK 1331
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 QIIVNLLGSK 10
Q+I N+L S+
Sbjct: 3296 QVIANILASE 3305
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 QIIVNLLGSK 10
QII+ + G K
Sbjct: 553 QIIIEICGKK 562
61|Sequence|301|310|LLGSKEGEHM
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 2 LGSKEGEHM 10
+ SKEG+H+
Sbjct: 997 INSKEGKHL 1005
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 2 LGSKEGEHM 10
+ SKEG+H+
Sbjct: 997 INSKEGKHL 1005
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 4 SKEGEHM 10
SKEG+H+
Sbjct: 999 SKEGKHL 1005
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LGSKEG 7
LGSKEG
Sbjct: 51 LGSKEG 56
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 LGSKEG 7
LGSKEG
Sbjct: 51 LGSKEG 56
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 LLGSKEGEH 9
+LG +E EH
Sbjct: 1811 VLGPREPEH 1819
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 LLGSKEGEH 9
++GS E EH
Sbjct: 1181 IIGSDECEH 1189
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 LLGSKEGEH 9
++GS E EH
Sbjct: 1181 IIGSDECEH 1189
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 LLGSKEGEH 9
++GS E EH
Sbjct: 1181 IIGSDECEH 1189
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 LLGSKE 6
LLGSKE
Sbjct: 368 LLGSKE 373
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 GSKEGE 8
GSK+GE
Sbjct: 102 GSKQGE 107
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 3 GSKEGEH 9
GS++G H
Sbjct: 379 GSRDGRH 385
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 LGSKEGEHM 10
+ KEG HM
Sbjct: 3044 ISRKEGGHM 3052
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 LLGSKEG 7
+LGS+EG
Sbjct: 526 VLGSQEG 532
>sp|VE2_HPV66|REGULATORY protein E2|Human papillomavirus 66
Query: 5 KEGEHM 10
KEG+H+
Sbjct: 112 KEGQHI 117
>sp|VE2_HPV56|REGULATORY protein E2|Human papillomavirus 56
Query: 5 KEGEHM 10
KEG+H+
Sbjct: 55 KEGQHI 60
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 LLGSKEG 7
+LGS+EG
Sbjct: 531 VLGSQEG 537
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 LLGSKEG 7
+LGS+EG
Sbjct: 531 VLGSQEG 537
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 LLGSKEG 7
+LGS+EG
Sbjct: 531 VLGSQEG 537
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 LLGSKEG 7
+LGS+EG
Sbjct: 532 VLGSQEG 538
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 LLGSKEG 7
+LGS+EG
Sbjct: 531 VLGSQEG 537
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 LLGSKEG 7
+LGS+EG
Sbjct: 531 VLGSQEG 537
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 LLGSKEG 7
+LGS+EG
Sbjct: 532 VLGSQEG 538
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 LLGSKEG 7
+LGS+EG
Sbjct: 547 VLGSQEG 553
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 LLGSKEG 7
+LGS+EG
Sbjct: 530 VLGSQEG 536
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 LLGSKEG 7
+LGS+EG
Sbjct: 530 VLGSQEG 536
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 LLGSKEG 7
+LGS+EG
Sbjct: 530 VLGSQEG 536
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LLGSKEG 7
+LGS+EG
Sbjct: 252 VLGSQEG 258
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LLGSKEG 7
+LGS+EG
Sbjct: 532 VLGSQEG 538
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LLGSKEG 7
+LGS+EG
Sbjct: 532 VLGSQEG 538
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LLGSKEG 7
+LGS+EG
Sbjct: 532 VLGSQEG 538
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 LLGSKEG 7
+LGS+EG
Sbjct: 532 VLGSQEG 538
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 LLGSKEG 7
+LGS+EG
Sbjct: 547 VLGSQEG 553
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 LLGSKEG 7
+LGS+EG
Sbjct: 543 VLGSQEG 549
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 LLGSKEG 7
+LGS+EG
Sbjct: 530 VLGSQEG 536
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 LLGSKEG 7
+LGS+EG
Sbjct: 530 VLGSQEG 536
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LLGSKEG 7
+LGS+EG
Sbjct: 532 VLGSQEG 538
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 LLGSKEG 7
+LGS+EG
Sbjct: 532 VLGSQEG 538
62|Sequence|306|315|EGEHMLSKAF
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EGEHMLSKA 9
EGE +LSKA
Sbjct: 3113 EGEGVLSKA 3121
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EGEHMLSKA 9
EGE +LSKA
Sbjct: 3113 EGEGVLSKA 3121
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EGEHMLSKA 9
EGE +LSKA
Sbjct: 3113 EGEGVLSKA 3121
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EGEHMLSKA 9
EGE +LSKA
Sbjct: 3113 EGEGVLSKA 3121
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 4 HMLSKAF 10
HML +AF
Sbjct: 999 HMLGEAF 1005
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 4 HMLSKAF 10
HML +AF
Sbjct: 1006 HMLGEAF 1012
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 4 HMLSKAF 10
HML +AF
Sbjct: 1006 HMLGEAF 1012
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 4 HMLSKAF 10
HML +AF
Sbjct: 1002 HMLGEAF 1008
>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)
Query: 1 EGEHML 6
EG+H+L
Sbjct: 300 EGQHLL 305
63|Sequence|311|320|LSKAFQSHLK
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 4 AFQSHLK 10
AFQ+H K
Sbjct: 583 AFQAHYK 589
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 4 AFQSHLK 10
AFQ+H K
Sbjct: 583 AFQAHYK 589
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 4 AFQSHLK 10
AFQ+H K
Sbjct: 583 AFQAHYK 589
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 4 AFQSHLK 10
AFQ+H K
Sbjct: 583 AFQAHYK 589
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 LSKAFQSHLK 10
LSK + HLK
Sbjct: 2095 LSKEVEKHLK 2104
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 1 LSKAFQSHLK 10
L+K F+ +LK
Sbjct: 622 LTKEFKDYLK 631
>sp|PG085_YLDV|PROBABLE metalloendopeptidase G1-type|Yaba-like disease virus (YLDV)
Query: 1 LSKAFQSH 8
LSK F SH
Sbjct: 558 LSKKFLSH 565
64|Sequence|316|325|QSHLKASEHA
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 QSHLKASEH 9
QSHLKA ++
Sbjct: 168 QSHLKADKN 176
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 QSHLKASEH 9
QSHLKA ++
Sbjct: 168 QSHLKADKN 176
>sp|UL25_HHV6G|VIRION-PACKAGING protein UL25 homolog|Human herpesvirus 6A (strain GS)
Query: 2 SHLKASEHA 10
SHLKA E A
Sbjct: 79 SHLKAIEDA 87
>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)
Query: 2 SHLKASEHA 10
SHLKA E A
Sbjct: 79 SHLKAIEDA 87
>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SHLKASEHA 10
SHLKA E A
Sbjct: 79 SHLKAIEDA 87
>sp|NCAP_CHAV|NUCLEOPROTEIN virus (strain I653514) (CHPV)
Query: 3 HLKASEHA 10
H K S+HA
Sbjct: 205 HFKKSDHA 212
>sp|PRO_ADE17|PROTEASE adenovirus D serotype 17
Query: 1 QSHLKASEHA 10
+SH A EHA
Sbjct: 187 RSHRAAIEHA 196
>sp|PG115_VACCA|CORE protein OPG115|Vaccinia virus (strain Ankara) (VACV)
Query: 1 QSHLKASEH 9
+SH + S+H
Sbjct: 173 RSHYRVSKH 181
>sp|PG115_MONPV|CORE protein OPG115|Monkeypox virus (MPXV)
Query: 1 QSHLKASEH 9
+SH + S+H
Sbjct: 173 RSHYRVSKH 181
>sp|D3_VARV|CORE protein D3|Variola virus
Query: 1 QSHLKASEH 9
+SH + S+H
Sbjct: 177 RSHYRVSKH 185
>sp|D3_VAR67|CORE protein D3|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 QSHLKASEH 9
+SH + S+H
Sbjct: 177 RSHYRVSKH 185
>sp|US10_HHV2H|VIRION protein US10|Human herpesvirus 2 (strain HG52)
Query: 1 QSHLKASEH 9
+SHLK S+H
Sbjct: 23 RSHLKPSDH 31
>sp|PRO_ADE09|PROTEASE adenovirus D serotype 9
Query: 1 QSHLKASEHA 10
+SH A EHA
Sbjct: 187 RSHRAAIEHA 196
>sp|PG115_VACCC|CORE protein OPG115|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 QSHLKASEH 9
+SH + S+H
Sbjct: 177 RSHYRVSKH 185
>sp|PG115_VACCT|CORE protein OPG115|Vaccinia virus (strain Tian Tan)
Query: 1 QSHLKASEH 9
+SH + S+H
Sbjct: 177 RSHYRVSKH 185
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 2 SHLKASEHA 10
+H K+ EH+
Sbjct: 359 NHTKSGEHS 367
65|Sequence|321|330|ASEHAADIQM
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 ASEHAADIQ 9
A EH AD++
Sbjct: 393 AREHRADLE 401
66|Sequence|326|335|ADIQMVNFDY
>sp|VP6_ROTHT|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 ADIQMVNFDY 10
++IQ+ FDY
Sbjct: 186 SEIQVAGFDY 195
>sp|VP6_ROTHP|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 ADIQMVNFDY 10
++IQ+ FDY
Sbjct: 186 SEIQVAGFDY 195
>sp|VP6_ROTYO|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 ADIQMVNFDY 10
++IQ+ FDY
Sbjct: 186 SEIQVAGFDY 195
>sp|VP6_ROTWI|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 1 ADIQMVNFDY 10
++IQ+ FDY
Sbjct: 186 SEIQVAGFDY 195
>sp|VP6_ROTHU|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 1 ADIQMVNFDY 10
++IQ+ FDY
Sbjct: 186 SEIQVAGFDY 195
>sp|VP6_ROTHL|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 ADIQMVNFDY 10
++IQ+ FDY
Sbjct: 186 SEIQVAGFDY 195
>sp|VP6_ROTHD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 ADIQMVNFDY 10
++IQ+ FDY
Sbjct: 186 SEIQVAGFDY 195
>sp|VP6_ROTH6|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 ADIQMVNFDY 10
++IQ+ FDY
Sbjct: 186 SEIQVAGFDY 195
>sp|VP6_ROTHK|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 ADIQMVNFDY 10
++IQ+ FDY
Sbjct: 186 SEIQVAGFDY 195
>sp|VP6_ROTAD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 ADIQMVNFDY 10
++IQ+ FDY
Sbjct: 186 SEIQVAGFDY 195
>sp|VP6_ROTHW|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 ADIQMVNFDY 10
++IQ+ FDY
Sbjct: 186 SEIQVAGFDY 195
>sp|VP6_ROTH7|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 1 ADIQMVNFDY 10
++IQ+ FDY
Sbjct: 186 SEIQVAGFDY 195
>sp|VP6_ROT41|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 1 ADIQMVNFDY 10
++IQ+ FDY
Sbjct: 186 SEIQVAGFDY 195
>sp|VP6_ROTH3|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 ADIQMVNFDY 10
++IQ+ FDY
Sbjct: 186 SEIQVAGFDY 195
>sp|VP6_ROTH1|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 1 ADIQMVNFDY 10
++IQ+ FDY
Sbjct: 186 SEIQVAGFDY 195
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 ADIQMVNFDY 10
ADI+ + FD+
Sbjct: 1239 ADIEAIMFDH 1248
>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63
Query: 2 DIQMVNFD 9
+I +VNFD
Sbjct: 207 EIPLVNFD 214
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 ADIQMVNFD 9
ADI+ + FD
Sbjct: 439 ADIKTLKFD 447
>sp|MCE_VACCC|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 5 MVNFDY 10
+VNFDY
Sbjct: 248 VVNFDY 253
>sp|MCE_VACCA|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 5 MVNFDY 10
+VNFDY
Sbjct: 248 VVNFDY 253
>sp|MCE_VAR67|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Variola virus (isolate
Query: 5 MVNFDY 10
+VNFDY
Sbjct: 248 VVNFDY 253
>sp|PG146_VAR67|PROTEIN OPG146|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 ADIQMVNFDY 10
+DI V+ DY
Sbjct: 41 SDITKVSLDY 50
>sp|PG146_VACCC|PROTEIN OPG146|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 ADIQMVNFDY 10
+DI V+ DY
Sbjct: 42 SDITKVSLDY 51
>sp|PG146_VACCA|PROTEIN OPG146|Vaccinia virus (strain Ankara) (VACV)
Query: 1 ADIQMVNFDY 10
+DI V+ DY
Sbjct: 42 SDITKVSLDY 51
>sp|PG146_MONPV|PROTEIN OPG146|Monkeypox virus (MPXV)
Query: 1 ADIQMVNFDY 10
+DI V+ DY
Sbjct: 42 SDITKVSLDY 51
67|Sequence|331|340|VNFDYHQMVK
>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 3 FDYHQMVK 10
FD+HQ+ K
Sbjct: 41 FDFHQLRK 48
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 3 FDYHQMVK 10
FD+HQ+ K
Sbjct: 41 FDFHQLRK 48
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 FDYHQMVK 10
FD+HQ+ K
Sbjct: 41 FDFHQLRK 48
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 FDYHQMVK 10
FD+HQ+ K
Sbjct: 41 FDFHQLRK 48
>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3
Query: 3 FDYHQMVK 10
FD+HQ+ K
Sbjct: 41 FDFHQLRK 48
>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3
Query: 3 FDYHQMVK 10
FD+HQ+ K
Sbjct: 41 FDFHQLRK 48
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 2 NFDYHQMVK 10
++D+HQ+ K
Sbjct: 40 SYDFHQLKK 48
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 2 NFDYHQMVK 10
++D+HQ+ K
Sbjct: 40 SYDFHQLKK 48
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 NFDYHQMVK 10
++D+HQ+ K
Sbjct: 40 SYDFHQLKK 48
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 NFDYHQMVK 10
++D+HQ+ K
Sbjct: 40 SYDFHQLKK 48
>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1
Query: 2 NFDYHQMVK 10
++D+HQ+ K
Sbjct: 40 SYDFHQLKK 48
>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1
Query: 2 NFDYHQMVK 10
++D+HQ+ K
Sbjct: 40 SYDFHQLKK 48
>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1
Query: 2 NFDYHQMVK 10
++D+HQ+ K
Sbjct: 40 SYDFHQLKK 48
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 2 NFDYHQ 7
N DYHQ
Sbjct: 517 NLDYHQ 522
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 3 FDYHQMVK 10
FD+ QMV+
Sbjct: 310 FDFSQMVQ 317
>sp|GL_HHV2H|ENVELOPE glycoprotein L|Human herpesvirus 2 (strain HG52)
Query: 1 VNFDYHQ 7
VNFDY +
Sbjct: 150 VNFDYSR 156
>sp|GL_HHV1K|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain KOS)
Query: 1 VNFDYHQ 7
VNFDY +
Sbjct: 150 VNFDYSR 156
>sp|GL_HHV11|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain 17)
Query: 1 VNFDYHQ 7
VNFDY +
Sbjct: 150 VNFDYSR 156
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 2 NFDYHQMVK 10
NFD +MV+
Sbjct: 361 NFDLSEMVQ 369
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 2 NFDYHQM 8
++D+HQ+
Sbjct: 40 SYDFHQL 46
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 NFDYHQM 8
++D+HQ+
Sbjct: 40 SYDFHQL 46
>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1
Query: 2 NFDYHQM 8
++D+HQ+
Sbjct: 40 SYDFHQL 46
>sp|EBNA1_EBVB9|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 FDYHQ 7
F+YHQ
Sbjct: 415 FEYHQ 419
>sp|EBNA1_EBVA8|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 FDYHQ 7
F+YHQ
Sbjct: 415 FEYHQ 419
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 VNFDYH 6
VN DYH
Sbjct: 1627 VNIDYH 1632
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 4 DYHQM 8
DYH+M
Sbjct: 1892 DYHRM 1896
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 4 DYHQM 8
DYH+M
Sbjct: 1892 DYHRM 1896
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 VNFDYH 6
VN DYH
Sbjct: 1627 VNIDYH 1632
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 VNFDYH 6
VN DYH
Sbjct: 1627 VNIDYH 1632
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 VNFDYHQMV 9
+N D H++V
Sbjct: 1132 INLDDHEIV 1140
>sp|MCE_VACCA|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 1 VNFDY 5
VNFDY
Sbjct: 249 VNFDY 253
>sp|MCE_VACCC|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 1 VNFDY 5
VNFDY
Sbjct: 249 VNFDY 253
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 NFDYHQ 7
N+DY Q
Sbjct: 1105 NYDYEQ 1110
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 NFDYHQ 7
N+DY Q
Sbjct: 1105 NYDYEQ 1110
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 NFDYHQ 7
N+DY Q
Sbjct: 1105 NYDYEQ 1110
>sp|MCE_VAR67|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Variola virus (isolate
Query: 1 VNFDY 5
VNFDY
Sbjct: 249 VNFDY 253
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 1 VNFDYHQMV 9
+NF YH ++
Sbjct: 935 LNFPYHDIM 943
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 NFDYHQMVK 10
NF YH++ K
Sbjct: 458 NFVYHRIPK 466
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 2 NFDYHQMVK 10
NF YH++ K
Sbjct: 458 NFVYHRIPK 466
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 1 VNFDYHQMV 9
+NF YH ++
Sbjct: 935 LNFPYHDIM 943
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 VNFDYHQMVK 10
V FDY +VK
Sbjct: 2337 VLFDYVSLVK 2346
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 VNFDYHQMVK 10
V FDY +VK
Sbjct: 2357 VLFDYVSLVK 2366
68|Sequence|336|345|HQMVKGGKAE
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 1 HQMVKGGKAE 10
HQ+ G+AE
Sbjct: 439 HQLSPAGQAE 448
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 4 VKGGKA 9
VKGGKA
Sbjct: 1545 VKGGKA 1550
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 1 HQMVKGG 7
HQ V GG
Sbjct: 296 HQAVSGG 302
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 1 HQMVKGGK 8
H V+GGK
Sbjct: 268 HFFVRGGK 275
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 1 HQMVKGGK 8
H V+GGK
Sbjct: 257 HFFVRGGK 264
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 1 HQMVKGGK 8
H V+GGK
Sbjct: 259 HFFVRGGK 266
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 1 HQMVKGGK 8
H V+GGK
Sbjct: 259 HFFVRGGK 266
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 1 HQMVKGGK 8
H V+GGK
Sbjct: 261 HFFVRGGK 268
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 1 HQMVKGGK 8
H V+GGK
Sbjct: 259 HFFVRGGK 266
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 1 HQMVKGGK 8
H V+GGK
Sbjct: 288 HFFVRGGK 295
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 HQMVKGGK 8
H V+GGK
Sbjct: 261 HFFVRGGK 268
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 1 HQMVKGGK 8
H V+GGK
Sbjct: 259 HFFVRGGK 266
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 1 HQMVKGGK 8
H V+GGK
Sbjct: 258 HFFVRGGK 265
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 1 HQMVKGGK 8
H V+GGK
Sbjct: 259 HFFVRGGK 266
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 MVKGGK 8
M+KGG+
Sbjct: 1392 MIKGGR 1397
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 4 VKGGKA 9
+KGGKA
Sbjct: 2086 LKGGKA 2091
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 HQMVKGGKA 9
H+M GG A
Sbjct: 1193 HEMNNGGDA 1201
>sp|B8_HHV6Z|PROTEIN B8|Human herpesvirus 6B (strain Z29)
Query: 1 HQMVKG 6
HQ VKG
Sbjct: 50 HQKVKG 55
69|Sequence|341|350|GGKAEKLHSV
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GKAEKLHS 9
G AEKLH+
Sbjct: 483 GDAEKLHA 490
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GKAEKLH 8
G AEKLH
Sbjct: 483 GDAEKLH 489
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 GGKAEKLHSV 10
GG AE++ +V
Sbjct: 1524 GGAAERMEAV 1533
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 GKAEKLHSV 10
GKAEKL +
Sbjct: 109 GKAEKLRDL 117
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 GGKAEKLHSV 10
G +EK H+V
Sbjct: 219 GASSEKTHTV 228
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 GGKAEKLHS 9
GG A LHS
Sbjct: 882 GGDAGNLHS 890
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 2 GKAEKLHS 9
G+A +LHS
Sbjct: 474 GRAIRLHS 481
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 4 AEKLHS 9
+EKLHS
Sbjct: 303 SEKLHS 308
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 4 AEKLHS 9
AEK+HS
Sbjct: 1398 AEKVHS 1403
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 4 AEKLHS 9
AEK+HS
Sbjct: 1397 AEKVHS 1402
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 4 AEKLHS 9
AEK+HS
Sbjct: 1400 AEKVHS 1405
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 4 AEKLHS 9
AEK+HS
Sbjct: 1400 AEKVHS 1405
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 4 AEKLHS 9
AEK+HS
Sbjct: 1387 AEKVHS 1392
70|Sequence|346|355|KLHSVLKPQV
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 KLHSVLKPQV 10
K HS LKP++
Sbjct: 2037 KKHSYLKPEI 2046
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 KLHSVLKPQV 10
K HS L PQ+
Sbjct: 1974 KTHSYLDPQI 1983
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 LHSVLKP 8
LH VLKP
Sbjct: 1357 LHMVLKP 1363
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 LHSVLKP 8
LH+VL+P
Sbjct: 605 LHNVLRP 611
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 KLHSVLKPQV 10
K HS L+P++
Sbjct: 2040 KKHSYLRPEI 2049
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 KLHSVLKPQV 10
K HS L+P++
Sbjct: 2060 KKHSYLRPEI 2069
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 2 LHSVLKPQ 9
L ++LKPQ
Sbjct: 232 LKTILKPQ 239
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 KLHSVLKPQV 10
K HS L+P++
Sbjct: 2033 KKHSYLQPEI 2042
>sp|E306_ADE35|EARLY E3 6.4 kDa protein|Human adenovirus B serotype 35
Query: 1 KLHSVLKP 8
KLH++ KP
Sbjct: 8 KLHTITKP 15
>sp|PROF_VARV|PROFILIN virus
Query: 3 HSVLKPQV 10
H++LKP +
Sbjct: 55 HNILKPLI 62
>sp|PROF_VAR67|PROFILIN virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 HSVLKPQV 10
H++LKP +
Sbjct: 55 HNILKPLI 62
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 KLHSVLKPQ 9
KLH +PQ
Sbjct: 1534 KLHCAYRPQ 1542
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 KLHSVLKPQ 9
KLH +PQ
Sbjct: 1534 KLHCAYRPQ 1542
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 KLHSVLKPQ 9
KLH +PQ
Sbjct: 1534 KLHCAYRPQ 1542
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 LHSVLKP 8
LH VL+P
Sbjct: 1776 LHHVLRP 1782
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 LHSVLKP 8
LH VL+P
Sbjct: 1776 LHHVLRP 1782
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 LHSVLKP 8
LH VL+P
Sbjct: 1776 LHHVLRP 1782
>sp|PROF_MONPZ|PROFILIN virus (strain Zaire-96-I-16) (MPXV)
Query: 3 HSVLKPQV 10
H++LKP +
Sbjct: 55 HNILKPLI 62
>sp|PROF_MONPV|PROFILIN virus (MPXV)
Query: 3 HSVLKPQV 10
H++LKP +
Sbjct: 55 HNILKPLI 62
>sp|PROF_CWPXG|PROFILIN virus (strain GRI-90 /
Query: 3 HSVLKPQV 10
H++LKP +
Sbjct: 55 HNILKPLI 62
>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 HSVLKPQV 10
H V +PQV
Sbjct: 399 HEVQEPQV 406
>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 HSVLKPQV 10
H V +PQV
Sbjct: 399 HEVQEPQV 406
71|Sequence|351|360|LKPQVQKFLD
>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)
Query: 2 KPQVQKF 8
+P++QKF
Sbjct: 315 RPELQKF 321
>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)
Query: 2 KPQVQKF 8
+P++QKF
Sbjct: 315 RPELQKF 321
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 4 QVQKFLD 10
++QKF+D
Sbjct: 1124 KIQKFID 1130
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 3 PQVQKF 8
PQ+QKF
Sbjct: 322 PQLQKF 327
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 KPQVQKFLD 10
K Q+Q F D
Sbjct: 1076 KKQIQGFFD 1084
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 LKPQVQKFLD 10
+KP++QK ++
Sbjct: 1721 VKPKIQKHIE 1730
>sp|PG096_MONPV|PROTEIN OPG096|Monkeypox virus (MPXV)
Query: 1 LKPQVQKFLD 10
L+P ++ F+D
Sbjct: 37 LRPLIRLFID 46
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 1 LKPQVQKFL 9
L PQ++K+L
Sbjct: 907 LIPQIEKYL 915
72|Sequence|356|365|QKFLDYGFFY
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 QKFLDYGFF 9
QKF D+G F
Sbjct: 1920 QKFFDFGDF 1928
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 QKFLDYGFF 9
QKF D+G F
Sbjct: 1920 QKFFDFGDF 1928
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 4 LDYGF 8
LDYGF
Sbjct: 203 LDYGF 207
73|Sequence|361|370|YGFFYFNGSE
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 YGFFYFNGSE 10
YG + FNGSE
Sbjct: 79 YGSYAFNGSE 88
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 YGFFYFNGSE 10
YG + FNGSE
Sbjct: 79 YGSYAFNGSE 88
Query: 1 YGFFYFNGSE 10
+ F YFNG +
Sbjct: 1251 FEFAYFNGPD 1260
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 2 GFFYFNGS 9
GF YFNG+
Sbjct: 93 GFVYFNGT 100
Query: 2 GFFYFNG 8
G FY NG
Sbjct: 199 GHFYING 205
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 YGFFYFNGSE 10
YG F F+G E
Sbjct: 78 YGSFVFDGRE 87
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 1 YGFFYFNGSE 10
YG F F+G E
Sbjct: 78 YGSFAFDGKE 87
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 YGFFYFNGSE 10
YG F F+G E
Sbjct: 78 YGSFAFDGKE 87
Query: 1 YGFFYFNGSE 10
+ F YFNG +
Sbjct: 1270 FEFAYFNGPD 1279
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 YGFFYFNGSE 10
YG F F+G E
Sbjct: 78 YGSFVFDGRE 87
Query: 1 YGFFYFNGSE 10
+ F YFNG +
Sbjct: 1249 FEFAYFNGPD 1258
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 YGFFYFNGSE 10
YG F F+G E
Sbjct: 78 YGSFAFDGRE 87
>sp|VE2_HPV37|REGULATORY protein E2|Human papillomavirus 37
Query: 1 YGFFYFNG 8
YG +YF G
Sbjct: 156 YGAYYFEG 163
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 YGFFYFNGSE 10
YG F F+G E
Sbjct: 78 YGSFAFDGRE 87
Query: 1 YGFFYFNG 8
+ F YFNG
Sbjct: 1250 FEFAYFNG 1257
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 3 FFYFNGSE 10
+ +FNGSE
Sbjct: 624 YMHFNGSE 631
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 3 FFYFNGSE 10
+ +FNGSE
Sbjct: 624 YMHFNGSE 631
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 YGFFYFNG 8
+ FFY NG
Sbjct: 583 FNFFYGNG 590
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 YGFFYFNG 8
+ FFY NG
Sbjct: 583 FNFFYGNG 590
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 2 GFFYFNG 8
G FY++G
Sbjct: 440 GLFYYHG 446
>sp|VE2_HPV66|REGULATORY protein E2|Human papillomavirus 66
Query: 1 YGFFYFNG 8
+ F Y+NG
Sbjct: 134 WKFIYYNG 141
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GFFYFNGSE 10
GF+ F+G E
Sbjct: 644 GFYCFSGVE 652
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 5 YFNGSE 10
YF GSE
Sbjct: 71 YFTGSE 76
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 YFNGSE 10
YF GSE
Sbjct: 81 YFTGSE 86
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 YFNGSE 10
YF GSE
Sbjct: 81 YFTGSE 86
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 4 FYFNGSE 10
F+F+G+E
Sbjct: 86 FFFHGTE 92
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 FYFNGSE 10
F+F+G+E
Sbjct: 86 FFFHGTE 92
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 2 GFFYFNGS 9
GF YFN +
Sbjct: 271 GFVYFNAT 278
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 GFFYFNGSE 10
G F FN +E
Sbjct: 805 GIFVFNDAE 813
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 GFFYFNGS 9
G FY +GS
Sbjct: 594 GVFYTDGS 601
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 GFFYFNGS 9
G F FNG+
Sbjct: 1075 GVFVFNGT 1082
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 1 YGFFYFNGS 9
Y F+ NGS
Sbjct: 256 YDFYEANGS 264
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 YGFFYFNGS 9
Y F+ NGS
Sbjct: 256 YDFYEANGS 264
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 YGFFYFNGS 9
Y F+ NGS
Sbjct: 256 YDFYEANGS 264
>sp|PG089_VARV|PUTATIVE nuclease OPG089|Variola virus
Query: 4 FYFNGS 9
FYFN S
Sbjct: 413 FYFNNS 418
>sp|PG089_VAR67|PUTATIVE nuclease OPG089|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 FYFNGS 9
FYFN S
Sbjct: 413 FYFNNS 418
>sp|PG089_VACCC|PUTATIVE nuclease OPG089|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 FYFNGS 9
FYFN S
Sbjct: 413 FYFNDS 418
74|Sequence|366|375|FNGSEVQRCQ
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 1 FNGSEVQRCQ 10
FN +E CQ
Sbjct: 271 FNSNEANHCQ 280
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 3 GSEVQRC 9
G E QRC
Sbjct: 684 GEEAQRC 690
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 3 GSEVQRC 9
G E QRC
Sbjct: 682 GEEAQRC 688
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 3 GSEVQRC 9
G E QRC
Sbjct: 677 GEEAQRC 683
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 NGSEVQRC 9
NG+++ +C
Sbjct: 4065 NGTDIDKC 4072
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 FNGSEVQ 7
F GSEV+
Sbjct: 72 FTGSEVE 78
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FNGSEVQ 7
F GSEV+
Sbjct: 82 FTGSEVE 88
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FNGSEVQ 7
F GSEV+
Sbjct: 82 FTGSEVE 88
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 NGSEVQRC 9
+GS++ RC
Sbjct: 12 SGSDLDRC 19
75|Sequence|371|380|VQRCQSGTVR
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 1 VQRCQSGTVR 10
VQR +SGT R
Sbjct: 480 VQRVRSGTKR 489
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 VQRCQSGTV 9
V+ CQ GTV
Sbjct: 5796 VKHCQCGTV 5804
>sp|UL16P_HCMVM|PROTEIN UL16|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 RCQSGTVR 10
RC++GT++
Sbjct: 142 RCENGTMK 149
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 1 VQRCQS 6
+QRC+S
Sbjct: 146 IQRCKS 151
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 RCQSGTVR 10
RCQ+G R
Sbjct: 510 RCQTGEYR 517
>sp|UL16P_HCMVA|PROTEIN UL16|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 RCQSGTVR 10
RC++GT +
Sbjct: 142 RCENGTTK 149
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 RCQSGTVR 10
RCQ+G R
Sbjct: 510 RCQTGEYR 517
>sp|Y206_ADE07|UNCHARACTERIZED 20.6 kDa early protein|Human adenovirus B serotype 7
Query: 1 VQRCQS 6
VQRCQ
Sbjct: 3 VQRCQG 8
76|Sequence|376|385|SGTVRTNCLD
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SGTVRTNC 8
+GT++ NC
Sbjct: 278 AGTIQANC 285
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SGTVRTNC 8
+GT++ NC
Sbjct: 278 AGTIQANC 285
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SGTVRTNC 8
+GT++ NC
Sbjct: 278 AGTIQANC 285
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 4 VRTNCLD 10
VRT+C D
Sbjct: 1014 VRTDCFD 1020
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 4 VRTNC 8
VRTNC
Sbjct: 435 VRTNC 439
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 SGTVRTNCLD 10
+GT +T C D
Sbjct: 4156 AGTTQTACTD 4165
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 SGTVRTNCLD 10
+GT +T C D
Sbjct: 4133 AGTTQTACTD 4142
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 SGTVRTNCLD 10
+GT +T C D
Sbjct: 4156 AGTTQTACTD 4165
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 GTVRTNC 8
GT TNC
Sbjct: 564 GTTYTNC 570
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 SGTVRTNCLD 10
+GT +T C D
Sbjct: 4133 AGTTQTACTD 4142
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 2 GTVRTNCL 9
GT + NCL
Sbjct: 473 GTPKKNCL 480
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GTVRTNC 8
GTV NC
Sbjct: 483 GTVSFNC 489
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 2 GTVRTNCL 9
GT + NCL
Sbjct: 447 GTPKHNCL 454
77|Sequence|381|390|TNCLDCLDRT
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 NCLDCLD 8
NC++CLD
Sbjct: 4666 NCINCLD 4672
Query: 2 NCLDC 6
NCL+C
Sbjct: 2428 NCLNC 2432
>sp|HEMA_INBSJ|HEMAGGLUTININ B virus (strain B/Singapore/1964)
Query: 2 NCLDCLD 8
NCL+C D
Sbjct: 67 NCLNCTD 73
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 CLDCLDR 9
CLD LDR
Sbjct: 24 CLDLLDR 30
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 CLDCLDR 9
CLD LDR
Sbjct: 24 CLDLLDR 30
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 CLDCLDR 9
CLD LDR
Sbjct: 24 CLDLLDR 30
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 3 CLDCLDR 9
CLD LDR
Sbjct: 24 CLDLLDR 30
>sp|HEMA_INBGL|HEMAGGLUTININ B virus (strain B/GL/1954)
Query: 2 NCLDCLD 8
NCL+C D
Sbjct: 67 NCLNCTD 73
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 NCLDCLD 8
NC++CLD
Sbjct: 4689 NCVNCLD 4695
>sp|HEMA_INBFU|HEMAGGLUTININ B virus (strain B/Fukuoka/80/1981)
Query: 2 NCLDCLD 8
NCL+C D
Sbjct: 56 NCLNCTD 62
>sp|HEMA_INBVL|HEMAGGLUTININ B virus (strain B/Victoria/103/1989)
Query: 2 NCLDCLD 8
NCL+C D
Sbjct: 71 NCLNCTD 77
>sp|HEMA_INBSD|HEMAGGLUTININ B virus (strain B/South
Query: 2 NCLDCLD 8
NCL+C D
Sbjct: 71 NCLNCTD 77
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 2 NCLDCLDR 9
+C+D LDR
Sbjct: 23 DCMDLLDR 30
>sp|HEMA_INBTE|HEMAGGLUTININ B virus (strain B/Texas/1/1991)
Query: 2 NCLDCLD 8
NCL+C D
Sbjct: 71 NCLNCTD 77
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 2 NCLDCLD 8
NCL+C D
Sbjct: 64 NCLNCTD 70
>sp|HEMA_INBBK|HEMAGGLUTININ B virus (strain B/Bangkok/163/1990)
Query: 2 NCLDCLD 8
NCL+C D
Sbjct: 71 NCLNCTD 77
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 2 NCLDCLD 8
NCL+C D
Sbjct: 71 NCLNCTD 77
>sp|HEMA_INBNY|HEMAGGLUTININ B virus (strain B/New
Query: 2 NCLDCLD 8
NCL+C D
Sbjct: 71 NCLNCTD 77
>sp|HEMA_INBHL|HEMAGGLUTININ B virus (strain B/Hong
Query: 2 NCLDCLD 8
NCL+C D
Sbjct: 71 NCLNCTD 77
>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)
Query: 2 NCLDCLD 8
NCL+C D
Sbjct: 71 NCLNCTD 77
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 2 NCLDCLD 8
NCL+C D
Sbjct: 71 NCLNCTD 77
>sp|HEMA_INBTF|HEMAGGLUTININ B virus (strain B/Texas/4/1990)
Query: 2 NCLDCLD 8
NCL+C D
Sbjct: 71 NCLNCTD 77
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 2 NCLDCLD 8
NCL+C D
Sbjct: 71 NCLNCTD 77
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 2 NCLDCLD 8
NCL+C D
Sbjct: 64 NCLNCTD 70
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 2 NCLDCLD 8
NCL+C D
Sbjct: 61 NCLNCTD 67
>sp|HEMA_INBHM|HEMAGGLUTININ B virus (strain B/Hong
Query: 2 NCLDCLD 8
NCL+C D
Sbjct: 71 NCLNCTD 77
>sp|HEMA_INBYB|HEMAGGLUTININ B virus (strain B/Yamagata/16/1988)
Query: 2 NCLDCLD 8
NCL+C D
Sbjct: 56 NCLNCTD 62
>sp|HEMA_INBP9|HEMAGGLUTININ B virus (strain B/Panama/45/1990)
Query: 2 NCLDCLD 8
NCL+C D
Sbjct: 71 NCLNCTD 77
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 CLDCLDR 9
C+D LDR
Sbjct: 24 CIDLLDR 30
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 3 CLDCLDR 9
C+D LDR
Sbjct: 24 CMDYLDR 30
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 2 NCLDCLDRT 10
+C+ C+DR+
Sbjct: 224 SCMVCVDRS 232
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 3 CLDCLDR 9
C+D LDR
Sbjct: 24 CIDYLDR 30
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 3 CLDCLDR 9
C+D LDR
Sbjct: 24 CIDYLDR 30
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 2 NCLDCLDRT 10
+C+ C+DR+
Sbjct: 220 SCMVCVDRS 228
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 NCLDCLD 8
NC DC D
Sbjct: 4335 NCSDCYD 4341
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 2 NCLDCLDRT 10
+C+ C+DR+
Sbjct: 222 SCMVCVDRS 230
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 2 NCLDCL 7
NCL CL
Sbjct: 318 NCLKCL 323
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 2 NCLDCLD 8
NC +C D
Sbjct: 64 NCFNCTD 70
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 NCLDC 6
NC+DC
Sbjct: 2439 NCIDC 2443
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 NCLDCLDRT 10
NCL DRT
Sbjct: 1857 NCLRKADRT 1865
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 2 NCLDCLD 8
NC +C D
Sbjct: 71 NCFNCTD 77
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 NCLDC 6
NC+DC
Sbjct: 2420 NCVDC 2424
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 NCLDC 6
NC+DC
Sbjct: 2439 NCIDC 2443
>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69
Query: 1 TNCLDCL 7
TNCL CL
Sbjct: 301 TNCLKCL 307
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 NCLDCLD 8
NC++C D
Sbjct: 4675 NCVNCTD 4681
Query: 2 NCLDC 6
NC+DC
Sbjct: 2420 NCVDC 2424
>sp|VE2_HPV6A|REGULATORY protein E2|Human papillomavirus type 6a
Query: 1 TNCLDCL 7
+NCL C
Sbjct: 294 SNCLKCF 300
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 3 CLDCLDR 9
C+ C+DR
Sbjct: 225 CIVCIDR 231
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 3 CLDCLDR 9
C+ C+DR
Sbjct: 225 CIVCIDR 231
>sp|VE2_HPV51|REGULATORY protein E2|Human papillomavirus 51
Query: 1 TNCLDCL 7
TNCL C
Sbjct: 291 TNCLKCF 297
>sp|VE2_HPV6B|REGULATORY protein E2|Human papillomavirus type 6b
Query: 1 TNCLDCL 7
+NCL C
Sbjct: 294 SNCLKCF 300
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 2 NCLDCL 7
NCL CL
Sbjct: 305 NCLKCL 310
>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 3 CLDCLDR 9
C+ C+DR
Sbjct: 225 CIVCIDR 231
>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 3 CLDCLDR 9
C+ C+DR
Sbjct: 225 CIVCIDR 231
>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 3 CLDCLDR 9
C+ C+DR
Sbjct: 225 CIVCIDR 231
>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 3 CLDCLDR 9
C+ C+DR
Sbjct: 225 CIVCIDR 231
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 2 NCLDCL 7
NCL CL
Sbjct: 305 NCLKCL 310
>sp|HEMA_INB|HEMAGGLUTININ B virus (strain B/ID/1986)
Query: 3 CLDCLD 8
CL+C D
Sbjct: 69 CLNCTD 74
>sp|ORF0_VZVD|MEMBRANE protein 0|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 NCLDC 6
+CLDC
Sbjct: 73 DCLDC 77
>sp|HEMA_INBAA|HEMAGGLUTININ B virus (strain B/Ann
Query: 3 CLDCLD 8
CL+C D
Sbjct: 64 CLNCTD 69
>sp|HEMA_INBVM|HEMAGGLUTININ B virus (strain B/Victoria/19/1989)
Query: 3 CLDCLD 8
CL+C D
Sbjct: 72 CLNCTD 77
>sp|HEMA_INBIB|HEMAGGLUTININ B virus (strain B/Ibaraki/2/1985)
Query: 3 CLDCLD 8
CL+C D
Sbjct: 57 CLNCTD 62
>sp|HEMA_INBF1|HEMAGGLUTININ B virus (strain B/Finland/24/1985)
Query: 3 CLDCLD 8
CL+C D
Sbjct: 57 CLNCTD 62
>sp|VE8E2_HPV51|PROTEIN E8^E2C|Human papillomavirus 51
Query: 1 TNCLDCL 7
TNCL C
Sbjct: 105 TNCLKCF 111
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 2 NCLDCL 7
NCL CL
Sbjct: 322 NCLKCL 327
>sp|HEMA_INBNA|HEMAGGLUTININ B virus (strain B/Nagasaki/1/1987)
Query: 3 CLDCLD 8
CL+C D
Sbjct: 57 CLNCTD 62
>sp|HEMA_INBP3|HEMAGGLUTININ B virus (strain B/Paris/329/1990)
Query: 3 CLDCLD 8
CL+C D
Sbjct: 72 CLNCTD 77
>sp|VE2_HPV11|REGULATORY protein E2|Human papillomavirus 11
Query: 1 TNCLDCL 7
+NCL C
Sbjct: 293 SNCLKCF 299
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 NCLDCLD 8
+C+DC D
Sbjct: 4360 DCVDCHD 4366
Query: 3 CLDCLDR 9
C DCL R
Sbjct: 5011 CGDCLRR 5017
>sp|HEMA_INBIN|HEMAGGLUTININ B virus (strain B/India/3/1989)
Query: 3 CLDCLD 8
CL+C D
Sbjct: 72 CLNCTD 77
>sp|HEMA_INBF9|HEMAGGLUTININ B virus (strain B/Finland/151/1990)
Query: 3 CLDCLD 8
CL+C D
Sbjct: 57 CLNCTD 62
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 3 CLDCLD 8
CL+C D
Sbjct: 65 CLNCTD 70
>sp|VE8E2_HPV57|PROTEIN E8^E2C|Human papillomavirus 57
Query: 2 NCLDCL 7
NCL C
Sbjct: 121 NCLKCF 126
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 3 CLDCLD 8
CL+C D
Sbjct: 65 CLNCTD 70
>sp|HEMA_INBF5|HEMAGGLUTININ B virus (strain B/Finland/147/1990)
Query: 3 CLDCLD 8
CL+C D
Sbjct: 57 CLNCTD 62
>sp|HEMA_INBF4|HEMAGGLUTININ B virus (strain B/Finland/146/1990)
Query: 3 CLDCLD 8
CL+C D
Sbjct: 57 CLNCTD 62
>sp|HEMA_INBF3|HEMAGGLUTININ B virus (strain B/Finland/145/1990)
Query: 3 CLDCLD 8
CL+C D
Sbjct: 57 CLNCTD 62
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 NCLDC 6
NCL+C
Sbjct: 2428 NCLNC 2432
>sp|HEMA_INBF8|HEMAGGLUTININ B virus (strain B/Finland/150/1990)
Query: 3 CLDCLD 8
CL+C D
Sbjct: 57 CLNCTD 62
>sp|HEMA_INBF7|HEMAGGLUTININ B virus (strain B/Finland/149/1990)
Query: 3 CLDCLD 8
CL+C D
Sbjct: 57 CLNCTD 62
>sp|HEMA_INBF6|HEMAGGLUTININ B virus (strain B/Finland/148/1990)
Query: 3 CLDCLD 8
CL+C D
Sbjct: 57 CLNCTD 62
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 3 CLDCLD 8
CL+C D
Sbjct: 72 CLNCTD 77
>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a
Query: 2 NCLDCL 7
NCL C
Sbjct: 320 NCLKCF 325
>sp|VE2_HPV13|REGULATORY protein E2|Human papillomavirus 13
Query: 1 TNCLDCL 7
+NCL C
Sbjct: 303 SNCLKCF 309
>sp|HEMA_INBF2|HEMAGGLUTININ B virus (strain B/Finland/56/1988)
Query: 3 CLDCLD 8
CL+C D
Sbjct: 57 CLNCTD 62
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 3 CLDCLD 8
CL+C D
Sbjct: 72 CLNCTD 77
>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3
Query: 2 NCLDCL 7
NCL C
Sbjct: 312 NCLKCF 317
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 TNCLDCLDR 9
T C++C+ +
Sbjct: 1287 TRCINCVRK 1295
>sp|VE8E2_HPV42|PROTEIN E8^E2C|Human papillomavirus 42
Query: 2 NCLDCL 7
NCL CL
Sbjct: 129 NCLKCL 134
>sp|VE8E2_HPV11|PROTEIN E8^E2C|Human papillomavirus 11
Query: 1 TNCLDCL 7
+NCL C
Sbjct: 103 SNCLKCF 109
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 2 NCLDCL 7
NCL C
Sbjct: 305 NCLKCF 310
>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28
Query: 2 NCLDCL 7
NCL C
Sbjct: 305 NCLKCF 310
>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40
Query: 2 NCLDCL 7
NCL C
Sbjct: 300 NCLKCF 305
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 2 NCLDCL 7
NCL C
Sbjct: 312 NCLKCF 317
78|Sequence|386|395|CLDRTNSVQA
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 CLDRTNSV 8
C DR NSV
Sbjct: 224 CFDRLNSV 231
>sp|US12_HCMVM|UNCHARACTERIZED protein US12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CLDRTNSVQA 10
C DRT +QA
Sbjct: 136 CFDRTVVIQA 145
>sp|US12_HCMVA|UNCHARACTERIZED protein HVLF6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CLDRTNSVQA 10
C DRT +QA
Sbjct: 136 CFDRTVVIQA 145
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 2 LDRTNSVQA 10
D+TNSV A
Sbjct: 30 FDQTNSVDA 38
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 CLDRTN 6
CLDR N
Sbjct: 1984 CLDRAN 1989
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 CLDRTNSVQ 9
+DR+ SVQ
Sbjct: 1575 AIDRSTSVQ 1583
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 CLDRTNSVQ 9
+DR+ SVQ
Sbjct: 1575 AIDRSTSVQ 1583
79|Sequence|391|400|NSVQAFLGLE
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 1 NSVQAFLGL 9
N ++AFLGL
Sbjct: 57 NDMRAFLGL 65
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 SVQAFLGL 9
SVQAFL +
Sbjct: 940 SVQAFLNI 947
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 SVQAFLGL 9
SVQAFL +
Sbjct: 941 SVQAFLNI 948
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 SVQAFLGL 9
SVQAFL +
Sbjct: 940 SVQAFLNI 947
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 SVQAFLGL 9
SVQAFL +
Sbjct: 940 SVQAFLNI 947
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 SVQAFLGL 9
SVQAFL +
Sbjct: 941 SVQAFLNI 948
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 NSVQAFLGLE 10
NSV F G++
Sbjct: 820 NSVYGFTGVQ 829
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 NSVQAFLGLE 10
NSV F G++
Sbjct: 820 NSVYGFTGVQ 829
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 NSVQAFLGLE 10
NSV F G++
Sbjct: 815 NSVYGFTGVQ 824
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 NSVQAFLGLE 10
NSV F G++
Sbjct: 815 NSVYGFTGVQ 824
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 1 NSVQAFLGLE 10
NSV F G++
Sbjct: 815 NSVYGFTGVQ 824
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 NSVQAFLGLE 10
NSV F G++
Sbjct: 815 NSVYGFTGVQ 824
80|Sequence|396|405|FLGLEMLAKQ
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 2 LGLEMLA 8
+GL+MLA
Sbjct: 540 MGLDMLA 546
81|Sequence|401|410|MLAKQLEALG
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 LAKQLEALG 10
LAKQL +LG
Sbjct: 1405 LAKQLTSLG 1413
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 LAKQLEALG 10
LAKQL +LG
Sbjct: 1408 LAKQLTSLG 1416
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 LAKQLEALG 10
LAKQL +LG
Sbjct: 1404 LAKQLTSLG 1412
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 LAKQLEALG 10
LAKQL +LG
Sbjct: 1404 LAKQLVSLG 1412
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 LAKQLEALG 10
LA+QL +LG
Sbjct: 1403 LARQLTSLG 1411
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 LAKQLEALG 10
L+KQL +LG
Sbjct: 1408 LSKQLTSLG 1416
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 1 MLAKQLEALG 10
+ AKQ+ ALG
Sbjct: 150 LTAKQIGALG 159
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 4 KQLEALG 10
+QLEA+G
Sbjct: 1212 EQLEAIG 1218
82|Sequence|406|415|LEALGLAEKP
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 4 LGLAEKP 10
+GL EKP
Sbjct: 1450 IGLEEKP 1456
83|Sequence|411|420|LAEKPQLVTR
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 EKPQLVTR 10
+KPQL+TR
Sbjct: 1706 KKPQLLTR 1713
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 3 EKPQLVTR 10
+KPQL+TR
Sbjct: 1684 KKPQLLTR 1691
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 3 EKPQLVTR 10
+KPQL+TR
Sbjct: 1679 KKPQLLTR 1686
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 LAEKPQLVTR 10
L KP+ VTR
Sbjct: 3154 LLRKPEKVTR 3163
>sp|NCAP_CVHOC|NUCLEOPROTEIN coronavirus OC43 (HCoV-OC43)
Query: 2 AEKPQLVTR 10
A KPQ VT+
Sbjct: 248 ATKPQQVTK 256
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LAEKPQLVT 9
+ +KP LVT
Sbjct: 1 MGDKPTLVT 9
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LAEKPQLVT 9
+ +KP LVT
Sbjct: 1 MGDKPTLVT 9
84|Sequence|416|425|QLVTRFQEVF
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 1 QLVTRFQEV 9
Q+VT FQEV
Sbjct: 3 QIVTFFQEV 11
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 1 QLVTRFQEV 9
Q+VT FQEV
Sbjct: 3 QIVTFFQEV 11
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 1 QLVTRFQEV 9
QLV+ FQE+
Sbjct: 3 QLVSFFQEI 11
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 1 QLVTRFQEV 9
QL++ FQE+
Sbjct: 3 QLISFFQEI 11
>sp|CEP1_HHV6Z|CYTOPLASMIC envelopment protein 1|Human herpesvirus 6B (strain Z29)
Query: 1 QLVTRFQEVF 10
QL T+F ++F
Sbjct: 231 QLATQFAQIF 240
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 4 TRFQEVF 10
TRF E+F
Sbjct: 770 TRFMEMF 776
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LVTRFQEVF 10
+VT F E+F
Sbjct: 580 VVTEFSEIF 588
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LVTRFQEVF 10
+VT F E+F
Sbjct: 580 VVTEFSEIF 588
85|Sequence|421|430|FQEVFRSMWS
>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 1 FQEVFRSMW 9
FQ+VF +MW
Sbjct: 132 FQDVFGTMW 140
>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 FQEVFRSMW 9
FQ+VF +MW
Sbjct: 132 FQDVFGTMW 140
>sp|GP350_EBVB9|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 FQEVFRSMW 9
FQ+VF +MW
Sbjct: 132 FQDVFGTMW 140
>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 FQEVFRSMW 9
FQ+VF +MW
Sbjct: 132 FQDVFGTMW 140
>sp|UL92_HCMVM|UNCHARACTERIZED protein UL92|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FQEVFRSM 8
F +VFRSM
Sbjct: 131 FNKVFRSM 138
>sp|UL92_HCMVA|PROTEIN UL92|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FQEVFRSM 8
F +VFRSM
Sbjct: 131 FNKVFRSM 138
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 QEVFRSMWS 10
+EV RS WS
Sbjct: 1146 EEVMRSRWS 1154
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 QEVFRSMWS 10
+EV RS WS
Sbjct: 1147 EEVMRSRWS 1155
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 QEVFRSMWS 10
+EV RS WS
Sbjct: 1147 EEVMRSRWS 1155
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 QEVFRSMWS 10
QEV R W+
Sbjct: 1166 QEVLRKRWT 1174
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 QEVFRSMWS 10
QEV R W+
Sbjct: 1160 QEVLRKRWT 1168
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 2 QEVFRSMWS 10
QEV R W+
Sbjct: 1095 QEVLRKRWT 1103
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 QEVFRSMWS 10
QEV R W+
Sbjct: 1166 QEVLRKRWT 1174
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 QEVFRSMWS 10
QEV R W+
Sbjct: 1167 QEVLRKRWT 1175
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 QEVFRSMWS 10
QEV R W+
Sbjct: 1160 QEVLRKRWT 1168
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 QEVFRSMWS 10
QEV R W+
Sbjct: 1167 QEVLRKRWT 1175
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 FQEVFRSM 8
F+EV RS+
Sbjct: 2312 FEEVLRSL 2319
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 QEVFRSMWS 10
QEV R W+
Sbjct: 1167 QEVLRKRWT 1175
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 QEVFRSMWS 10
QEV R W+
Sbjct: 1167 QEVLRKRWT 1175
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 FQEVFRSM 8
F+EV RS+
Sbjct: 2308 FEEVLRSL 2315
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 QEVFRSMWS 10
QEV R W+
Sbjct: 1164 QEVLRKRWT 1172
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 QEVFRSMWS 10
QEV R W+
Sbjct: 1164 QEVLRKRWT 1172
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 FRSMW 9
F+SMW
Sbjct: 216 FKSMW 220
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 QEVFRSMWS 10
QEV R W+
Sbjct: 1160 QEVLRRRWT 1168
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 EVFRSMWS 10
E+FR +W+
Sbjct: 435 ELFRFIWA 442
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 EVFRSMWS 10
E+FR +W+
Sbjct: 435 ELFRFIWA 442
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 EVFRSMWS 10
E+FR +W+
Sbjct: 435 ELFRFIWA 442
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 4 VFRSMW 9
+FR++W
Sbjct: 927 IFRNIW 932
>sp|NSP2_ROTHK|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 1 FQEVFRSMW 9
FQ V +MW
Sbjct: 159 FQNVAFTMW 167
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 4 VFRSMW 9
+FR++W
Sbjct: 927 IFRNVW 932
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 4 VFRSMW 9
+FR++W
Sbjct: 927 IFRNVW 932
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 4 VFRSMWS 10
+FR +WS
Sbjct: 1075 LFRKIWS 1081
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 3 EVFRSMWS 10
++F S WS
Sbjct: 152 DIFASKWS 159
86|Sequence|426|435|RSMWSVNGDS
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 3 MWSVNGDS 10
+W VNGDS
Sbjct: 620 VWDVNGDS 627
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 3 MWSVNGDS 10
+W VNGDS
Sbjct: 623 VWDVNGDS 630
>sp|VME1_SARS2|MEMBRANE protein|Severe acute respiratory syndrome coronavirus
Query: 1 RSMWSVNGDS 10
RSMWS N ++
Sbjct: 107 RSMWSFNPET 116
>sp|VME1_SARS|MEMBRANE protein|Severe acute respiratory syndrome coronavirus
Query: 1 RSMWSVNGDS 10
RSMWS N ++
Sbjct: 106 RSMWSFNPET 115
>sp|UL88_HHV6U|PROTEIN U59|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 WSVNGD 9
W VNGD
Sbjct: 66 WHVNGD 71
>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 3 MWSVNG 8
MW VNG
Sbjct: 536 MWEVNG 541
>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 MWSVNG 8
MW VNG
Sbjct: 536 MWEVNG 541
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 3 MWSVNG 8
MW VNG
Sbjct: 536 MWEVNG 541
>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 MWSVNG 8
MW VNG
Sbjct: 536 MWEVNG 541
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 3 MWSVNG 8
MW VNG
Sbjct: 536 MWEVNG 541
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 1 RSMWSVN 7
RS+WS N
Sbjct: 484 RSLWSEN 490
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 1 RSMWSVN 7
RS+WS N
Sbjct: 484 RSLWSEN 490
>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 3 MWSVNG 8
MW +NG
Sbjct: 535 MWEING 540
>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 MWSVNG 8
MW +NG
Sbjct: 530 MWEING 535
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 RSMWSVNG 8
R+ WSV+G
Sbjct: 3303 RTTWSVHG 3310
>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 RSMWSVNG 8
R+ WSV+G
Sbjct: 3303 RTTWSVHG 3310
>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 3 MWSVNG 8
MW +NG
Sbjct: 529 MWEING 534
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 RSMWSVNG 8
R+ WSV+G
Sbjct: 3303 RTTWSVHG 3310
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I01A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 MWSVNG 8
MW +NG
Sbjct: 200 MWEING 205
>sp|PB2_I01A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 MWSVNG 8
MW +NG
Sbjct: 200 MWEING 205
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 3 MWSVNG 8
MW +NG
Sbjct: 536 MWEING 541
>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea
Query: 3 MWSVNG 8
MW +NG
Sbjct: 528 MWEING 533
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 WSVNGD 9
W VNGD
Sbjct: 409 WFVNGD 414
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 WSVNGD 9
W VNGD
Sbjct: 409 WFVNGD 414
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 WSVNGD 9
W VNGD
Sbjct: 409 WFVNGD 414
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 WSVNGD 9
W VNGD
Sbjct: 409 WFVNGD 414
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 WSVNGD 9
W VNGD
Sbjct: 409 WFVNGD 414
>sp|VP40_EBOZM|MATRIX protein VP40|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 5 SVNGDS 10
SVNGD+
Sbjct: 41 SVNGDT 46
>sp|VP40_EBOZ5|MATRIX protein VP40|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 5 SVNGDS 10
SVNGD+
Sbjct: 41 SVNGDT 46
>sp|VP40_EBOG4|MATRIX protein VP40|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 5 SVNGDS 10
SVNGD+
Sbjct: 41 SVNGDT 46
>sp|EV45_HHV2H|ENVELOPE protein UL45|Human herpesvirus 2 (strain HG52)
Query: 4 WSVNGD 9
W VNGD
Sbjct: 117 WWVNGD 122
>sp|EV45_HHV23|ENVELOPE protein UL45|Human herpesvirus 2 (strain 333)
Query: 4 WSVNGD 9
W VNGD
Sbjct: 117 WWVNGD 122
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 3 MWSVNG 8
+WSV+G
Sbjct: 82 LWSVSG 87
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RSMWSVN 7
+S W+VN
Sbjct: 831 KSSWTVN 837
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 4 WSVNGD 9
WS N D
Sbjct: 392 WSANSD 397
87|Sequence|431|440|VNGDSISKIY
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 3 GDSISKIY 10
G+SI+ IY
Sbjct: 115 GNSITNIY 122
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 GDSISK 8
GDS+SK
Sbjct: 578 GDSVSK 583
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 1 VNGDSISKI 9
+N D ISK+
Sbjct: 347 INSDQISKM 355
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 4 DSISKIY 10
D I+KIY
Sbjct: 399 DEITKIY 405
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 4 DSISKIY 10
D I+KIY
Sbjct: 399 DEITKIY 405
88|Sequence|436|445|ISKIYAGTGA
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 ISKIYAGT 8
+S IYAGT
Sbjct: 1320 LSSIYAGT 1327
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 2 SKIYAGT 8
SK+YAG+
Sbjct: 802 SKVYAGS 808
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 SKIYAGTG 9
SK+ AGTG
Sbjct: 1135 SKVTAGTG 1142
>sp|UL34_HCMVT|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 ISKIYAGT 8
ISK Y GT
Sbjct: 30 ISKAYKGT 37
>sp|UL34_HCMVM|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ISKIYAGT 8
ISK Y GT
Sbjct: 30 ISKAYKGT 37
>sp|UL34_HCMVA|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ISKIYAGT 8
ISK Y GT
Sbjct: 30 ISKAYKGT 37
>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)
Query: 4 IYAGTGA 10
+YAG GA
Sbjct: 161 VYAGRGA 167
>sp|US18_HCMVT|TRANSMEMBRANE protein HWLF5|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 ISKIYAG 7
+SKIY+G
Sbjct: 189 VSKIYSG 195
>sp|US18_HCMVM|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ISKIYAG 7
+SKIY+G
Sbjct: 189 VSKIYSG 195
>sp|US18_HCMVA|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ISKIYAG 7
+SKIY+G
Sbjct: 189 VSKIYSG 195
>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)
Query: 4 IYAGTGA 10
+YAG GA
Sbjct: 166 VYAGRGA 172
>sp|E320_ADE1A|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 11
Query: 1 ISKIYAG 7
+SK+Y+G
Sbjct: 76 VSKVYSG 82
>sp|E320_ADE35|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 35
Query: 1 ISKIYAG 7
+SK+Y+G
Sbjct: 76 VSKVYSG 82
>sp|E320_ADE1P|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 11
Query: 1 ISKIYAG 7
+SK+Y+G
Sbjct: 76 VSKVYSG 82
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 ISKIYAGTG 9
++ IY G+G
Sbjct: 1315 LTNIYTGSG 1323
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 SKIYAGT 8
+K+YAG+
Sbjct: 803 AKVYAGS 809
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 SKIYAGT 8
+K+YAG+
Sbjct: 803 AKVYAGS 809
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 YAGTGA 10
Y GTGA
Sbjct: 605 YEGTGA 610
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 YAGTGA 10
Y GTGA
Sbjct: 605 YEGTGA 610
>sp|ORF45_HHV8P|PROTEIN ORF45|Human herpesvirus 8 type P
Query: 5 YAGTGA 10
Y GTGA
Sbjct: 194 YTGTGA 199
>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)
Query: 1 ISKIYAGTG 9
+S +YAG G
Sbjct: 463 LSVLYAGRG 471
>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)
Query: 1 ISKIYAGTG 9
+S +YAG G
Sbjct: 463 LSVLYAGRG 471
89|Sequence|441|450|AGTGALEGKA
>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P
Query: 3 TGALEGKA 10
TGA EGKA
Sbjct: 83 TGASEGKA 90
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 AGTGALEGKA 10
+GT +EGK+
Sbjct: 385 SGTQLIEGKS 394
90|Sequence|446|455|LEGKAKLKDG
>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P
Query: 2 EGKAKLKD 9
EGKA +KD
Sbjct: 87 EGKASIKD 94
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 GKAKLKDG 10
GKA+L+DG
Sbjct: 1489 GKAELEDG 1496
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 GKAKLKDG 10
GKA+L+DG
Sbjct: 1489 GKAELEDG 1496
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 GKAKLKDG 10
GKA+L+DG
Sbjct: 1489 GKAELEDG 1496
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 GKAKLKDG 10
GKA+L+DG
Sbjct: 1489 GKAELEDG 1496
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 GKAKLKDG 10
GKA+L+DG
Sbjct: 1489 GKAELEDG 1496
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 GKAKLKDG 10
GKA+L+DG
Sbjct: 1489 GKAELEDG 1496
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 GKAKLKDG 10
GKA+L+DG
Sbjct: 1079 GKAELEDG 1086
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 GKAKLKDG 10
G+A+L+DG
Sbjct: 1489 GRAELEDG 1496
>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 KAKLKD 9
KAKLKD
Sbjct: 171 KAKLKD 176
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 EGKAKLK 8
+GKA+LK
Sbjct: 387 DGKARLK 393
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 1 LEGKAKLKDG 10
L GK K DG
Sbjct: 415 LSGKFKKSDG 424
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 1 LEGKAKLKDG 10
L GK K DG
Sbjct: 415 LSGKFKKSDG 424
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 LEGKAKLKDG 10
L GK K DG
Sbjct: 415 LSGKFKKSDG 424
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LEGKAKLKDG 10
L GK K DG
Sbjct: 415 LSGKFKKSDG 424
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LEGKAKLKDG 10
L GK K DG
Sbjct: 407 LSGKFKKSDG 416
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 1 LEGKAKLKDG 10
L GK K DG
Sbjct: 415 LSGKFKKSDG 424
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 1 LEGKAKLKDG 10
L GK K DG
Sbjct: 415 LSGKFKKSDG 424
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 1 LEGKAKLKDG 10
L GK K DG
Sbjct: 415 LSGKFKKSDG 424
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 1 LEGKAKLKDG 10
L GK K DG
Sbjct: 415 LSGKFKKSDG 424
91|Sequence|451|460|KLKDGARSVT
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 KLKDGARS 8
+LKDGAR+
Sbjct: 1948 RLKDGART 1955
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 KLKDGARS 8
+LKDGAR+
Sbjct: 617 RLKDGART 624
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 3 KDGARSV 9
KDG RSV
Sbjct: 130 KDGKRSV 136
>sp|DR3_HHV6Z|UNCHARACTERIZED protein DR3|Human herpesvirus 6B (strain Z29)
Query: 4 DGARSVT 10
DGARSV+
Sbjct: 60 DGARSVS 66
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GARSVT 10
GARSVT
Sbjct: 528 GARSVT 533
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 3 KDGARS 8
+DGARS
Sbjct: 353 RDGARS 358
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 3 KDGARS 8
+DGARS
Sbjct: 353 RDGARS 358
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 3 KDGARS 8
+DGARS
Sbjct: 353 RDGARS 358
92|Sequence|456|465|ARSVTRTIQN
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ARSVTRTIQ 9
ARSVT T+Q
Sbjct: 529 ARSVTLTVQ 537
>sp|DR3_HHV6Z|UNCHARACTERIZED protein DR3|Human herpesvirus 6B (strain Z29)
Query: 1 ARSVTRTIQ 9
ARSV+RT +
Sbjct: 62 ARSVSRTCE 70
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 ARSVTRTIQN 10
++S+T+TI+N
Sbjct: 1065 SQSITKTIKN 1074
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 ARSVTRTIQN 10
++S+T+TI+N
Sbjct: 1065 SQSITKTIKN 1074
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ARSVTRTIQ 9
ARS+T T+Q
Sbjct: 523 ARSLTLTVQ 531
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ARSVTRTIQ 9
ARS+T T+Q
Sbjct: 529 ARSLTLTVQ 537
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 ARSVTRTIQ 9
RSVT+T Q
Sbjct: 184 GRSVTKTSQ 192
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ARSVTRTIQ 9
ARS+T T+Q
Sbjct: 524 ARSMTLTVQ 532
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ARSVTRTIQ 9
ARS+T T+Q
Sbjct: 537 ARSMTLTVQ 545
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ARSVTRTIQ 9
ARS+T T+Q
Sbjct: 531 ARSMTLTVQ 539
93|Sequence|461|470|RTIQNNFFDS
>sp|VE7_HPV68|PROTEIN E7|Human papillomavirus 68
Query: 1 RTIQNNFFDS 10
RT+Q F DS
Sbjct: 88 RTLQQLFMDS 97
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 RTIQNNF 7
RTI+N+F
Sbjct: 1037 RTIRNSF 1043
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 RTIQNNF 7
RTI+N+F
Sbjct: 1037 RTIRNSF 1043
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 RTIQNNF 7
RTI+N+F
Sbjct: 1037 RTIRNSF 1043
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 RTIQNNF 7
RTI+N+F
Sbjct: 1037 RTIRNSF 1043
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 RTIQNNF 7
RTI+N+F
Sbjct: 1037 RTIRNSF 1043
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 RTIQNNF 7
RTI+N+F
Sbjct: 1037 RTIRNSF 1043
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 RTIQNNF 7
RTI+N+F
Sbjct: 1037 RTIRNSF 1043
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 3 IQNNFFDS 10
I N F+DS
Sbjct: 88 IDNGFYDS 95
>sp|PG077_VACCP|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 IQNNFF 8
++NNFF
Sbjct: 83 VENNFF 88
>sp|PG077_VAR67|TELOMERE-BINDING protein OPG077|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 IQNNFF 8
++NNFF
Sbjct: 83 VENNFF 88
>sp|PG077_VACCT|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Tian Tan)
Query: 3 IQNNFF 8
++NNFF
Sbjct: 83 VENNFF 88
>sp|PG077_VACCC|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 IQNNFF 8
++NNFF
Sbjct: 83 VENNFF 88
>sp|PG077_MONPZ|TELOMERE-BINDING protein OPG077|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 3 IQNNFF 8
++NNFF
Sbjct: 83 VENNFF 88
>sp|PG077_MONPV|TELOMERE-BINDING protein OPG077|Monkeypox virus (MPXV)
Query: 3 IQNNFF 8
++NNFF
Sbjct: 83 VENNFF 88
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 3 IQNNFFDS 10
I N F+DS
Sbjct: 88 IDNGFYDS 95
>sp|PG077_VACCA|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Ankara) (VACV)
Query: 3 IQNNFF 8
++NNFF
Sbjct: 83 VENNFF 88
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 2 TIQNNFFDS 10
T++N+FF +
Sbjct: 54 TVENDFFPT 62
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 RTIQNNFFDS 10
R NN FDS
Sbjct: 1195 RRCYNNNFDS 1204
94|Sequence|466|475|NFFDSSKQEA
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 1 NFFDSS 6
+FFDSS
Sbjct: 131 SFFDSS 136
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 NFFDSS 6
+FFDSS
Sbjct: 131 SFFDSS 136
>sp|VPAP_HCMVM|DNA polymerase processivity factor|Human cytomegalovirus (strain
Query: 1 NFFDSSKQEA 10
N+F+ +K+E+
Sbjct: 404 NYFNDAKEES 413
>sp|VPAP_HCMVA|DNA polymerase processivity factor|Human cytomegalovirus (strain AD169)
Query: 1 NFFDSSKQEA 10
N+F+ +K+E+
Sbjct: 404 NYFNDAKEES 413
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 FFDSSKQE 9
F D SK+E
Sbjct: 1034 FHDDSKEE 1041
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 FFDSSKQE 9
F D SK+E
Sbjct: 1034 FHDDSKEE 1041
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 FFDSSKQE 9
F D SK+E
Sbjct: 1034 FHDDSKEE 1041
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 NFFDSSKQEA 10
N F SKQ A
Sbjct: 1750 NVFPGSKQPA 1759
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 4 DSSKQEA 10
DSS+Q+A
Sbjct: 1603 DSSRQQA 1609
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 4 DSSKQEA 10
DSS+Q+A
Sbjct: 1603 DSSRQQA 1609
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 FDSSKQ 8
FDSSK+
Sbjct: 1940 FDSSKE 1945
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 FDSSKQ 8
FDSSK+
Sbjct: 1940 FDSSKE 1945
95|Sequence|471|480|SKQEAIDVLL
>sp|VE6_HPV6B|PROTEIN E6|Human papillomavirus type 6b
Query: 1 SKQEAIDVLL 10
+KQ+ +DVL+
Sbjct: 93 TKQDILDVLI 102
>sp|VE6_HPV6A|PROTEIN E6|Human papillomavirus type 6a
Query: 1 SKQEAIDVLL 10
+KQ+ +DVL+
Sbjct: 93 TKQDILDVLI 102
>sp|VGPCR_HHV8P|VIRAL G-protein coupled receptor|Human herpesvirus 8 type P
Query: 1 SKQEAIDVLL 10
S+ AID+LL
Sbjct: 77 SRAGAIDILL 86
>sp|VE6_HPV13|PROTEIN E6|Human papillomavirus 13
Query: 1 SKQEAIDVLL 10
+KQ +DVL+
Sbjct: 93 TKQSILDVLI 102
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 3 QEAIDVLL 10
Q+AIDV++
Sbjct: 357 QQAIDVVI 364
96|Sequence|476|485|IDVLLLGNTL
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DVLLLGNT 9
DVLLL NT
Sbjct: 535 DVLLLSNT 542
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DVLLLGNT 9
DVLLL NT
Sbjct: 535 DVLLLNNT 542
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DVLLLGNT 9
DVLLL NT
Sbjct: 535 DVLLLNNT 542
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DVLLLGNT 9
DVLLL NT
Sbjct: 535 DVLLLNNT 542
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DVLLLGNT 9
DVLLL NT
Sbjct: 535 DVLLLNNT 542
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DVLLLGNT 9
DV+LL NT
Sbjct: 535 DVMLLNNT 542
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 2 DVLLLGN 8
D++LLGN
Sbjct: 300 DIILLGN 306
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 DVLLLGNT 9
DVL+L NT
Sbjct: 535 DVLILNNT 542
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 2 DVLLLGNTL 10
D+ L+GNTL
Sbjct: 1034 DLGLVGNTL 1042
>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain
Query: 1 IDVLLLG 7
+DVLLLG
Sbjct: 51 LDVLLLG 57
>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains
Query: 1 IDVLLLG 7
+DVLLLG
Sbjct: 51 LDVLLLG 57
>sp|HEMA_VACCT|PROTEIN OPG185|Vaccinia virus (strain Tian Tan)
Query: 1 IDVLLLGNT 9
ID++L G+T
Sbjct: 136 IDIILSGST 144
>sp|HEMA_VACCI|PROTEIN OPG185|Vaccinia virus (strain IHD-J) (VACV)
Query: 1 IDVLLLGNT 9
ID++L G+T
Sbjct: 136 IDIILSGST 144
>sp|HEMA_VACCC|PROTEIN OPG185|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 IDVLLLGNT 9
ID++L G+T
Sbjct: 136 IDIILSGST 144
>sp|HEMA_VACCA|PROTEIN OPG185|Vaccinia virus (strain Ankara) (VACV)
Query: 1 IDVLLLGNT 9
ID++L G+T
Sbjct: 136 IDIILSGST 144
>sp|HEMA_CWPXG|PROTEIN OPG185|Cowpox virus (strain GRI-90 /
Query: 1 IDVLLLGNT 9
ID++L G+T
Sbjct: 136 IDIILSGST 144
>sp|PHOSP_HMPVC|PHOSPHOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 DVLLLGN 8
D+L +GN
Sbjct: 8 DILFMGN 14
>sp|HEMA_MONPV|PROTEIN OPG185|Monkeypox virus (MPXV)
Query: 1 IDVLLLGNT 9
ID++L G+T
Sbjct: 136 IDIILSGST 144
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 IDVLLLGN 8
+DVL+ GN
Sbjct: 613 VDVLVHGN 620
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 IDVLLLGN 8
+DVL+ GN
Sbjct: 613 VDVLVHGN 620
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 IDVLLLGNTL 10
+DV +LG+ L
Sbjct: 261 VDVTILGSLL 270
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 IDVLLLGNTL 10
+DV +LG+ L
Sbjct: 261 VDVTILGSLL 270
97|Sequence|481|490|LGNTLNSDLA
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 1 LGNTLNSDL 9
LGN+L+SDL
Sbjct: 292 LGNSLHSDL 300
>sp|NEF_HV1B9|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 NTLNSDLA 10
NT N+D+A
Sbjct: 50 NTNNADIA 57
98|Sequence|486|495|NSDLADKARA
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SDLADKA 8
SD+AD+A
Sbjct: 180 SDIADRA 186
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 SDLADKARA 10
+DL DK +A
Sbjct: 1284 ADLPDKGKA 1292
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 NSDLADKA 8
N+DL DK+
Sbjct: 402 NNDLIDKS 409
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 NSDLADKA 8
N+DL DK+
Sbjct: 402 NNDLIDKS 409
99|Sequence|491|500|DKARALLTTG
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 RALLTTG 10
RALL TG
Sbjct: 114 RALLVTG 120
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 RALLTTG 10
RALL TG
Sbjct: 114 RALLVTG 120
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 ARALLTTG 10
RAL TTG
Sbjct: 308 GRALYTTG 315
100|Sequence|496|505|LLTTGSLRVS
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 LLTTGSLRVS 10
LL GS+RVS
Sbjct: 1150 LLLMGSIRVS 1159
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 2 LTTGSL 7
LTTGSL
Sbjct: 673 LTTGSL 678
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 4 TGSLRVS 10
+GSLR+S
Sbjct: 439 SGSLRIS 445
101|Sequence|501|510|SLRVSEQTLQ
>sp|UL20_VZVD|PROTEIN UL20 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 RVSEQT 8
RVSEQT
Sbjct: 7 RVSEQT 12
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 1 SLRVSEQT 8
S+RVSE T
Sbjct: 113 SMRVSEPT 120
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 VSEQTLQ 10
VSE+TLQ
Sbjct: 1435 VSEKTLQ 1441
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 SLRVSEQTL 9
SLR S QTL
Sbjct: 130 SLRSSTQTL 138
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 1 SLRVSEQTL 9
S+RVSE T+
Sbjct: 805 SIRVSEVTV 813
102|Sequence|506|515|EQTLQSASSK
***** No hits found ******
103|Sequence|511|520|SASSKVLKSM
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 SSKVLKSM 10
SSKVLKS+
Sbjct: 1515 SSKVLKSL 1522
104|Sequence|516|525|VLKSMCENFY
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 4 SMCENFY 10
S+C++FY
Sbjct: 417 SLCKDFY 423
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 3 KSMCENFY 10
KS C FY
Sbjct: 131 KSSCAQFY 138
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 4 SMCENF 9
+MC NF
Sbjct: 52 AMCSNF 57
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 4 SMCENF 9
+MC NF
Sbjct: 52 AMCSNF 57
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 4 SMCENF 9
+MC NF
Sbjct: 52 AMCSNF 57
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 4 SMCENF 9
+MC NF
Sbjct: 52 AMCSNF 57
>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 KSMCENF 9
+S+CEN
Sbjct: 260 RSICENL 266
>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 KSMCENF 9
+S+CEN
Sbjct: 260 RSICENL 266
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 1 VLKSMCENFY 10
VLK++C+ Y
Sbjct: 521 VLKNLCDTAY 530
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 LKSMCENFY 10
L S+C FY
Sbjct: 2157 LISVCNRFY 2165
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 LKSMCENFY 10
L S+C FY
Sbjct: 2157 LISVCNRFY 2165
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 1 VLKSMCENF 9
V+KSM NF
Sbjct: 112 VIKSMRSNF 120
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 VLKSMCENF 9
V+KSM NF
Sbjct: 112 VIKSMRSNF 120
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 1 VLKSMCENF 9
V+KSM NF
Sbjct: 112 VIKSMRSNF 120
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VLKSMCENF 9
V+KSM NF
Sbjct: 112 VIKSMRSNF 120
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 KSMCENFY 10
K CE+FY
Sbjct: 4952 KFWCEDFY 4959
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 3 KSMCENFY 10
+S+CE F+
Sbjct: 1252 QSVCEEFF 1259
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 3 KSMCENF 9
K++CEN
Sbjct: 260 KNICENL 266
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 3 KSMCENF 9
K++CEN
Sbjct: 260 KNICENL 266
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 3 KSMCENF 9
K++CEN
Sbjct: 260 KNICENL 266
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 3 KSMCENF 9
K++CEN
Sbjct: 260 KNICENL 266
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 5 MCENFY 10
+C+NF+
Sbjct: 263 LCDNFH 268
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 5 MCENFY 10
+C+NF+
Sbjct: 263 LCDNFH 268
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 KSMCENF 9
+S CE+F
Sbjct: 132 RSQCEDF 138
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 KSMCENF 9
+S CE+F
Sbjct: 132 RSQCEDF 138
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 KSMCENF 9
+S CE+F
Sbjct: 132 RSQCEDF 138
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 VLKSMCENFY 10
V+K+ C N Y
Sbjct: 245 VMKTHCPNDY 254
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 VLKSMCENFY 10
V+K+ C N Y
Sbjct: 245 VMKTHCPNDY 254
105|Sequence|521|530|CENFYKYSKP
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 ENFYKYSKP 10
E F+KY KP
Sbjct: 1703 ETFWKYRKP 1711
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 NFYKYSKP 10
+FY+Y+KP
Sbjct: 4492 DFYRYNKP 4499
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 CENFYKY 7
C FYKY
Sbjct: 222 CARFYKY 228
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 CENFYKYS 8
CE F++Y+
Sbjct: 2255 CETFWRYN 2262
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 CENFYKYS 8
CE F++Y+
Sbjct: 2255 CETFWRYN 2262
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 1 CENFYKYSK 9
C++FY SK
Sbjct: 419 CKDFYNNSK 427
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 NFYKYSKP 10
N+YKY+ P
Sbjct: 4877 NYYKYNLP 4884
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 CENFYKYSKP 10
C+N Y+KP
Sbjct: 1951 CDNGKYYTKP 1960
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 CENFYKYSKP 10
C+N Y+KP
Sbjct: 1981 CDNGKYYTKP 1990
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 NFYKYSKP 10
N+YKY+ P
Sbjct: 4857 NYYKYNLP 4864
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 NFYKYSKP 10
N+YKY+ P
Sbjct: 4907 NYYKYNLP 4914
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 NFYKYSKP 10
N+YKY+ P
Sbjct: 4819 NYYKYNLP 4826
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 CENFYKYSKP 10
C+N Y+KP
Sbjct: 1931 CDNGKYYTKP 1940
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 1 CENFYKYS 8
C NFY Y+
Sbjct: 408 CYNFYTYT 415
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 FYKYSKP 10
FYK S+P
Sbjct: 2660 FYKPSEP 2666
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 FYKYSKP 10
FYK S+P
Sbjct: 2660 FYKPSEP 2666
Query: 2 ENFYKYSK 9
E F+KY +
Sbjct: 2549 EEFFKYRR 2556
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 FYKYSKP 10
FYK S+P
Sbjct: 2660 FYKPSEP 2666
Query: 2 ENFYKYSK 9
E F+KY +
Sbjct: 2549 EEFFKYRR 2556
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 FYKYSKP 10
FYK S+P
Sbjct: 2660 FYKPSEP 2666
Query: 2 ENFYKYSK 9
E F+KY +
Sbjct: 2549 EEFFKYRR 2556
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 ENFYKYSK 9
E+F KY K
Sbjct: 2551 EDFLKYRK 2558
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 CENFYKYSK 9
C+ FY SK
Sbjct: 418 CDGFYNNSK 426
>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1
Query: 2 ENFYKYSK 9
E F KYS+
Sbjct: 435 ETFIKYSR 442
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 1 CENFYKYS 8
CE YKY+
Sbjct: 374 CEIAYKYA 381
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 3 NFYKYSK 9
NFY Y++
Sbjct: 164 NFYHYNQ 170
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 1 CENFYKYS 8
CE YKY+
Sbjct: 371 CEIAYKYA 378
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 3 NFYKYSKP 10
N YK +KP
Sbjct: 339 NVYKATKP 346
106|Sequence|526|535|KYSKPKKIRV
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 YSKPKKIRV 10
Y KPK IRV
Sbjct: 839 YLKPKHIRV 847
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 YSKPKKIRV 10
Y KPK IRV
Sbjct: 839 YLKPKHIRV 847
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 YSKPKKIRV 10
Y KPK +RV
Sbjct: 837 YMKPKHVRV 845
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 2 YSKPKKIRV 10
Y KPK +RV
Sbjct: 838 YMKPKHVRV 846
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 YSKPKKIRV 10
Y KPK +RV
Sbjct: 838 YMKPKHVRV 846
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 YSKPKKIRV 10
Y KPK +RV
Sbjct: 837 YMKPKHVRV 845
>sp|PG128_VACCC|PROTEIN OPG128|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 YSKPKKIRV 10
YS+PKK+++
Sbjct: 41 YSQPKKLKI 49
>sp|PG128_MONPV|PROTEIN OPG128|Monkeypox virus (MPXV)
Query: 2 YSKPKKIRV 10
YS+PKK+++
Sbjct: 42 YSQPKKLKI 50
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 YSKPKKIR 9
Y KPK IR
Sbjct: 836 YMKPKHIR 843
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 2 YSKPKKI 8
Y KPKK+
Sbjct: 775 YKKPKKV 781
>sp|GLYCP_NIPAV|GLYCOPROTEIN G|Nipah virus
Query: 1 KYSKPKKIRV 10
+YSKP+ R+
Sbjct: 388 QYSKPENCRL 397
>sp|PG128_VAR67|PROTEIN OPG128|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 YSKPKKIRV 10
YS+P+K++V
Sbjct: 41 YSQPQKLKV 49
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 2 YSKPKKIR 9
Y KPK +R
Sbjct: 842 YMKPKHVR 849
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 3 SKPKKIRV 10
SKP+ +R+
Sbjct: 1588 SKPRTVRI 1595
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 2 YSKPKK 7
+SKPKK
Sbjct: 420 HSKPKK 425
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 3 SKPKKIRV 10
SKP+ +R+
Sbjct: 1588 SKPRTVRI 1595
>sp|VIF_HV1MV|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 KYSKPKKIR 9
+++KP KIR
Sbjct: 173 RWNKPWKIR 181
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 YSKPKKIR 9
Y KPK I+
Sbjct: 808 YMKPKHIK 815
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 2 YSKPKKIRV 10
YSK IR+
Sbjct: 81 YSKDNSIRI 89
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 YSKPKKIRV 10
YSK IR+
Sbjct: 81 YSKDNSIRI 89
>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983
Query: 2 YSKPKKIRV 10
YSK IR+
Sbjct: 100 YSKDNSIRI 108
>sp|NRAM_I82A2|NEURAMINIDASE A virus (strain A/Camel/Mongolia/1982
Query: 2 YSKPKKIRV 10
YSK IR+
Sbjct: 83 YSKDNSIRI 91
>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980
Query: 2 YSKPKKIRV 10
YSK IR+
Sbjct: 100 YSKDNSIRI 108
>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979
Query: 2 YSKPKKIRV 10
YSK IR+
Sbjct: 100 YSKDNSIRI 108
>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977
Query: 2 YSKPKKIRV 10
YSK IR+
Sbjct: 100 YSKDNSIRI 108
>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978
Query: 2 YSKPKKIRV 10
YSK IR+
Sbjct: 100 YSKDNSIRI 108
>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New
Query: 2 YSKPKKIRV 10
YSK IR+
Sbjct: 100 YSKDNSIRI 108
>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New
Query: 2 YSKPKKIRV 10
YSK IR+
Sbjct: 100 YSKDNSIRI 108
>sp|NRAM_I67A2|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 YSKPKKIRV 10
YSK IR+
Sbjct: 100 YSKDNSIRI 108
>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 YSKPKKIRV 10
YSK IR+
Sbjct: 100 YSKDNSIRI 108
>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 YSKPKKIRV 10
YSK IR+
Sbjct: 100 YSKDNSIRI 108
>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954
Query: 2 YSKPKKIRV 10
YSK IR+
Sbjct: 100 YSKDNSIRI 108
>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951
Query: 2 YSKPKKIRV 10
YSK IR+
Sbjct: 100 YSKDNSIRI 108
>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936
Query: 2 YSKPKKIRV 10
YSK IR+
Sbjct: 100 YSKDNSIRI 108
>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto
Query: 2 YSKPKKIRV 10
YSK IR+
Sbjct: 85 YSKDNSIRI 93
>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004
Query: 2 YSKPKKIRV 10
YSK IR+
Sbjct: 80 YSKDNSIRI 88
>sp|VE6_HPV30|PROTEIN E6|Human papillomavirus 30
Query: 2 YSKPKKIR 9
YSK +KIR
Sbjct: 73 YSKVRKIR 80
107|Sequence|531|540|KKIRVCVGTW
>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 KIRVCVGTW 10
KIR+ VG W
Sbjct: 271 KIRLLVGNW 279
>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)
Query: 2 KIRVCVGTW 10
KIR+ VG W
Sbjct: 271 KIRLLVGNW 279
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 KIRVCVGTW 10
KIR+ VG W
Sbjct: 271 KIRLLVGNW 279
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 2 KIRVCVGTW 10
KIR+ VG W
Sbjct: 271 KIRLLVGNW 279
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 KIRVCVGTW 10
KIR+ VG W
Sbjct: 271 KIRLLVGNW 279
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 2 KIRVCVGTW 10
KIR+ VG W
Sbjct: 271 KIRLLVGNW 279
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 RVCVGTW 10
RVC G W
Sbjct: 531 RVCAGLW 537
>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 RVCVGTW 10
R+C+G W
Sbjct: 455 RLCLGLW 461
>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 RVCVGTW 10
R+C+G W
Sbjct: 455 RLCLGLW 461
>sp|MIR1_HHV8P|E3 ubiquitin-protein ligase MIR1|Human herpesvirus 8 type P
Query: 4 RVCVGTW 10
R C+ TW
Sbjct: 35 RSCLSTW 41
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 2 KIRVCV 7
KIRVC+
Sbjct: 38 KIRVCI 43
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 2 KIRVCVGTW 10
++ VC+ TW
Sbjct: 279 RLNVCLITW 287
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 2 KIRVCVGTW 10
++ VC+ TW
Sbjct: 279 RLNVCLITW 287
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 2 KIRVCVGTW 10
++ VC+ TW
Sbjct: 279 RLNVCLITW 287
>sp|B3_HHV6Z|PROTEIN B3|Human herpesvirus 6B (strain Z29)
Query: 2 KIRVCVG 8
++RVCVG
Sbjct: 4 RLRVCVG 10
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 IRVCVGT 9
+RVCV T
Sbjct: 1162 LRVCVDT 1168
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 IRVCVGT 9
+RVCV T
Sbjct: 1162 LRVCVDT 1168
>sp|VL1_HPV64|MAJOR capsid protein L1|Human papillomavirus type 64
Query: 5 VCVGT 9
VCVGT
Sbjct: 29 VCVGT 33
>sp|PG191_MONPV|PROTEIN OPG191|Monkeypox virus (MPXV)
Query: 5 VCVGT 9
VCVGT
Sbjct: 83 VCVGT 87
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 5 VCVGT 9
VCVGT
Sbjct: 367 VCVGT 371
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 4 RVCVGTW 10
R+C TW
Sbjct: 2055 RMCSNTW 2061
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 1 KKIRVCVGTW 10
K + C G W
Sbjct: 189 KSNKTCCGDW 198
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 IRVCVGT 9
+RVC G+
Sbjct: 2957 VRVCYGS 2963
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 RVCVGTW 10
R C TW
Sbjct: 2050 RTCSNTW 2056
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 RVCVGTW 10
R C TW
Sbjct: 2050 RTCSNTW 2056
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 IRVCVGT 9
+RVC G+
Sbjct: 2957 VRVCYGS 2963
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 KKIRVCVGTW 10
KKI +C G +
Sbjct: 289 KKITMCPGLY 298
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 KKIRVCVGT 9
KK+ +C GT
Sbjct: 407 KKLTICNGT 415
108|Sequence|536|545|CVGTWNVNGG
>sp|NEF_HV2RO|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 CVGTWNVNGG 10
C G WN +GG
Sbjct: 28 CGGYWNESGG 37
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 5 WNVNGG 10
W+VNGG
Sbjct: 2073 WHVNGG 2078
>sp|VE2_HPV53|REGULATORY protein E2|Human papillomavirus type 53
Query: 1 CVGTWNVNGG 10
C GTW V+ G
Sbjct: 180 CKGTWEVHMG 189
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 1 CVGTWN 6
C G+WN
Sbjct: 462 CTGSWN 467
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 CVGTWN 6
C G+WN
Sbjct: 462 CTGSWN 467
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 5 WNVNGG 10
WNV GG
Sbjct: 346 WNVGGG 351
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 VGTWNVN 8
V TWNV+
Sbjct: 334 VATWNVD 340
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GTWNVNGG 10
TWNV GG
Sbjct: 393 STWNVTGG 400
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 GTWNVN 8
G WN+N
Sbjct: 1112 GKWNIN 1117
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 GTWNVN 8
G WN+N
Sbjct: 1112 GKWNIN 1117
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 GTWNVN 8
G WN+N
Sbjct: 1112 GKWNIN 1117
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 GTWNVN 8
G WN+N
Sbjct: 1112 GKWNIN 1117
>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3
Query: 3 GTWNVNGG 10
GTW+V+ G
Sbjct: 184 GTWDVHVG 191
>sp|CAP6_ADE12|PRE-PROTEIN VI|Human adenovirus A serotype 12
Query: 2 VGTWN------VNGG 10
+GTWN +NGG
Sbjct: 19 MGTWNEIGTSQLNGG 33
>sp|CAP6_ADE40|PRE-PROTEIN VI|Human adenovirus F serotype 40
Query: 2 VGTWN------VNGG 10
+GTWN +NGG
Sbjct: 19 MGTWNEIGTSQLNGG 33
>sp|CAP6_ADE41|PRE-PROTEIN VI|Human adenovirus F serotype 41
Query: 2 VGTWN------VNGG 10
+GTWN +NGG
Sbjct: 19 MGTWNEIGTSQLNGG 33
>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)
Query: 1 CVGTWNVNG 9
C+ WN G
Sbjct: 101 CINYWNFCG 109
>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 CVGTWNVNG 9
C+ WN G
Sbjct: 101 CINYWNFCG 109
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 1 CVGTWNVNG 9
C+ WN G
Sbjct: 101 CINYWNFCG 109
>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann
Query: 1 CVGTWNVNG 9
C+ WN G
Sbjct: 101 CINYWNFCG 109
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CVGTWN 6
C G WN
Sbjct: 399 CRGQWN 404
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 CVGTWNVNGG 10
C G+ N+N G
Sbjct: 2064 CEGSDNINDG 2073
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 CVGTWNVNGG 10
C G+ N+N G
Sbjct: 2064 CEGSDNINDG 2073
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 GTWNVN 8
G WN N
Sbjct: 1112 GKWNTN 1117
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 5 WNVNG 9
W+VNG
Sbjct: 624 WDVNG 628
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 5 WNVNG 9
W+VNG
Sbjct: 621 WDVNG 625
>sp|E1B55_ADE12|E1B 55 kDa protein|Human adenovirus A serotype 12
Query: 1 CVGTWN 6
CV +WN
Sbjct: 256 CVESWN 261
>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)
Query: 3 GTWNVNGG 10
G W + GG
Sbjct: 118 GNWALTGG 125
>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)
Query: 3 GTWNVNGG 10
G W + GG
Sbjct: 118 GNWALTGG 125
>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)
Query: 3 GTWNVNGG 10
G W + GG
Sbjct: 118 GNWALTGG 125
>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins
Query: 3 GTWNVNGG 10
G W + GG
Sbjct: 118 GNWALTGG 125
>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)
Query: 3 GTWNVNGG 10
G W + GG
Sbjct: 118 GNWALTGG 125
>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)
Query: 3 GTWNVNGG 10
G W + GG
Sbjct: 118 GNWALTGG 125
>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 3 GTWNVNGG 10
G W + GG
Sbjct: 118 GNWALTGG 125
>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)
Query: 3 GTWNVNGG 10
G W + GG
Sbjct: 118 GNWALTGG 125
>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)
Query: 3 GTWNVNGG 10
G W + GG
Sbjct: 118 GNWALTGG 125
>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)
Query: 3 GTWNVNGG 10
G W + GG
Sbjct: 118 GNWALTGG 125
>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)
Query: 3 GTWNVNGG 10
G W + GG
Sbjct: 118 GNWALTGG 125
>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)
Query: 3 GTWNVNGG 10
G W + GG
Sbjct: 118 GNWALTGG 125
>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 3 GTWNVNGG 10
G W + GG
Sbjct: 118 GNWALTGG 125
>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 3 GTWNVNGG 10
G W + GG
Sbjct: 118 GNWALTGG 125
>sp|CAP6_ADE02|PRE-PROTEIN VI|Human adenovirus C serotype 2
Query: 2 VGTWNVNGG 10
+GT N++GG
Sbjct: 25 IGTSNMSGG 33
>sp|UL38_HHV6U|APOPTOSIS inhibitor U19|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 VGTWNVNGG 10
VG NV GG
Sbjct: 338 VGCENVQGG 346
>sp|CAP6_ADE05|PRE-PROTEIN VI|Human adenovirus C serotype 5
Query: 2 VGTWNVNGG 10
+GT N++GG
Sbjct: 25 IGTSNMSGG 33
>sp|UL88_HHV6U|PROTEIN U59|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 WNVNG 9
W+VNG
Sbjct: 66 WHVNG 70
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 4 TWNVN 8
+WN+N
Sbjct: 1656 SWNIN 1660
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 4 TWNVN 8
+WN+N
Sbjct: 1656 SWNIN 1660
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 4 TWNVN 8
+WN+N
Sbjct: 1656 SWNIN 1660
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 VGTWNVN 8
VGTW ++
Sbjct: 1227 VGTWQMD 1233
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 4 TWNVNG 9
TW+V+G
Sbjct: 704 TWSVSG 709
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 3 GTWNVNGG 10
GTW V G
Sbjct: 184 GTWEVQVG 191
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 1 CVGTW 5
C+G W
Sbjct: 155 CLGAW 159
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 TWNVN 8
TWN+N
Sbjct: 394 TWNIN 398
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 4 TWNVNGG 10
TW +GG
Sbjct: 1177 TWYTDGG 1183
>sp|U18_HHV6U|PUTATIVE immediate early glycoprotein|Human herpesvirus 6A (strain
Query: 1 CVGTWNVNG 9
C+ T VNG
Sbjct: 42 CISTCYVNG 50
>sp|U18_HHV6Z|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (strain Z29)
Query: 1 CVGTWNVNG 9
C+ T VNG
Sbjct: 42 CISTCYVNG 50
>sp|U18_HHV6H|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 1 CVGTWNVNG 9
C+ T VNG
Sbjct: 42 CISTCYVNG 50
>sp|VE2_HPV60|REGULATORY protein E2|Human papillomavirus type 60
Query: 3 GTWNVN 8
GTW V+
Sbjct: 186 GTWTVH 191
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 3 GTWNVNG 9
G W +NG
Sbjct: 589 GAWILNG 595
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 VGTWNVNGG 10
V WN NG
Sbjct: 1880 VPLWNGNGA 1888
109|Sequence|541|550|NVNGGKQFRS
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 1 NVNGGKQF 8
N+NG KQF
Sbjct: 1032 NLNGKKQF 1039
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 1 NVNGGKQF 8
N+NG KQF
Sbjct: 1032 NLNGKKQF 1039
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 NVNGGKQF 8
N NGG +F
Sbjct: 2186 NANGGSKF 2193
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 NVNGGKQF 8
N NGG +F
Sbjct: 2186 NANGGSKF 2193
>sp|HBEAG_HBVC2|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 NVNGGKQFR 9
NVN G +FR
Sbjct: 119 NVNMGLKFR 127
>sp|CAPSD_HBVC2|CAPSID protein|Hepatitis B virus genotype C
Query: 1 NVNGGKQFR 9
NVN G +FR
Sbjct: 90 NVNMGLKFR 98
>sp|CVC1_HHV6U|CAPSID vertex component 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 NGGKQF 8
NGGK F
Sbjct: 343 NGGKSF 348
>sp|HBEAG_HBVD7|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 1 NVNGGKQFR 9
N+N G +FR
Sbjct: 119 NINMGLKFR 127
>sp|CAPSD_HBVD7|CAPSID protein|Hepatitis B virus genotype D
Query: 1 NVNGGKQFR 9
N+N G +FR
Sbjct: 90 NINMGLKFR 98
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 NVNGGKQFR 9
NVN K FR
Sbjct: 314 NVNEWKHFR 322
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 1 NVNGGKQFR 9
NVN K FR
Sbjct: 314 NVNEWKHFR 322
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 GGKQFR 9
GG++FR
Sbjct: 614 GGREFR 619
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 NGGKQFR 9
+GG QFR
Sbjct: 3666 SGGVQFR 3672
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 1 NVNGGKQFR 9
N+N GK R
Sbjct: 553 NINAGKDDR 561
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 1 NVNGGKQFR 9
N+N GK R
Sbjct: 547 NINAGKDDR 555
110|Sequence|546|555|KQFRSIAFKN
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 KQFRSIAFKN 10
KQF ++ F N
Sbjct: 820 KQFHAVIFPN 829
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 KQFRSIAFKN 10
KQF ++ F N
Sbjct: 820 KQFHAVIFPN 829
111|Sequence|551|560|IAFKNQTLTD
>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)
Query: 1 IAFKNQTLTD 10
I + NQTLTD
Sbjct: 106 IDWANQTLTD 115
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 3 FKNQTLTD 10
F+NQTL D
Sbjct: 1656 FENQTLYD 1663
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 3 FKNQTLTD 10
FK++TLT+
Sbjct: 956 FKSETLTN 963
112|Sequence|556|565|QTLTDWLLDA
>sp|NSP2_ROTJ1|NON-STRUCTURAL protein 2|Rotavirus X (strain
Query: 3 LTDWLLD 9
+TDWLL+
Sbjct: 92 ITDWLLN 98
>sp|NSP2_ROTB2|NON-STRUCTURAL protein 2|Rotavirus X (isolate
Query: 3 LTDWLLD 9
+TDWLL+
Sbjct: 92 ITDWLLN 98
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 QTLTDWLLD 9
Q L+D+LLD
Sbjct: 6105 QMLSDYLLD 6113
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 QTLTDWLLD 9
Q L+D+LLD
Sbjct: 6125 QMLSDYLLD 6133
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 QTLTDWLLD 9
Q L+D+LLD
Sbjct: 6155 QMLSDYLLD 6163
>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 3 LTDWLLD 9
+TDWLL+
Sbjct: 92 VTDWLLN 98
>sp|NSP1B_ROTGA|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate
Query: 2 TLTDW 6
TLTDW
Sbjct: 314 TLTDW 318
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 QTLTDWL 7
QTL DW+
Sbjct: 1659 QTLMDWV 1665
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 QTLTDWL 7
QTL DW+
Sbjct: 1659 QTLMDWV 1665
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 QTLTDWL 7
QTL DW+
Sbjct: 1659 QTLYDWI 1665
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 5 DWLLDA 10
DWLLD
Sbjct: 2895 DWLLDG 2900
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 TLTDWLLD 9
+L +WL+D
Sbjct: 427 SLVEWLID 434
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 QTLTDWLLD 9
+ + DWL+D
Sbjct: 305 KMIQDWLID 313
>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P
Query: 3 LTDWLLDA 10
LTD+++DA
Sbjct: 10 LTDFIIDA 17
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 QTLTDWLLD 9
+ + DWL+D
Sbjct: 305 KMIQDWLVD 313
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 1 QTLTDWLLD 9
+ + DWL+D
Sbjct: 305 KMIQDWLVD 313
>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 QTLTDWLLD 9
+ + DWL+D
Sbjct: 305 KMIQDWLVD 313
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 5 DWLLD 9
DWL+D
Sbjct: 155 DWLMD 159
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 2 TLTDW 6
T+TDW
Sbjct: 75 TITDW 79
>sp|PG161_MONPV|PROTEIN OPG161|Monkeypox virus (MPXV)
Query: 3 LTDWLLD 9
LT WL+D
Sbjct: 140 LTTWLID 146
>sp|PG161_VARV|PROTEIN OPG161|Variola virus
Query: 3 LTDWLLD 9
LT WL+D
Sbjct: 139 LTTWLID 145
>sp|PG161_VAR67|PROTEIN OPG161|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 LTDWLLD 9
LT WL+D
Sbjct: 139 LTTWLID 145
>sp|PG025_MONPV|ANKYRIN repeat protein OPG025|Monkeypox virus (MPXV)
Query: 3 LTDWLLD 9
L +WL+D
Sbjct: 424 LIEWLID 430
>sp|M2_I000X|MATRIX protein 2|Influenza A virus (strain A/X-31
Query: 3 LTDWLLD 9
LT W+LD
Sbjct: 38 LTLWMLD 44
>sp|M1_I82A9|MATRIX protein 1|Influenza A virus (strain A/Philippines/2/1982
Query: 1 QTLTDWL 7
+ LT+WL
Sbjct: 40 EALTEWL 46
>sp|M2_I06A0|MATRIX protein 2|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 LTDWLLD 9
LT W+LD
Sbjct: 38 LTLWILD 44
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 LTDWL 7
+TDWL
Sbjct: 737 VTDWL 741
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 LTDWL 7
+TDWL
Sbjct: 737 VTDWL 741
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 1 QTLTDWLLD 9
QT+ +WL +
Sbjct: 217 QTMVNWLCE 225
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 1 QTLTDWLLD 9
QT+ +WL +
Sbjct: 217 QTMVNWLCE 225
113|Sequence|561|570|WLLDAPKLAG
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 1 WLLDAPKL 8
WL+D P L
Sbjct: 156 WLMDPPML 163
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 WLLDAPK 7
W+L APK
Sbjct: 1500 WILQAPK 1506
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 WLLDAPK 7
W+L APK
Sbjct: 1500 WILQAPK 1506
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 WLLDAPK 7
W+L APK
Sbjct: 1500 WILQAPK 1506
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 WLLDAPK 7
W+L APK
Sbjct: 1500 WILQAPK 1506
>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus
Query: 1 WLLDAPKLAG 10
W LD KL+G
Sbjct: 490 WTLDGQKLSG 499
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 WLLDAPK 7
W+L APK
Sbjct: 1498 WILQAPK 1504
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 WLLDAPK 7
W+L APK
Sbjct: 1500 WILQAPK 1506
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 WLLDAPK 7
W+L APK
Sbjct: 1514 WILQAPK 1520
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 WLLDAPK 7
W+L APK
Sbjct: 1515 WILQAPK 1521
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 WLLDAPK 7
W+L APK
Sbjct: 1515 WILQAPK 1521
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 WLLDAPK 7
WL DAP+
Sbjct: 1559 WLEDAPE 1565
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 1 WLLDAPKL 8
+++DAPKL
Sbjct: 880 FVIDAPKL 887
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 1 WLLDAPK 7
WL++ PK
Sbjct: 89 WLIEEPK 95
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 WLLDAPK 7
WL++ PK
Sbjct: 89 WLIEEPK 95
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 WLLDAPK 7
WL++ PK
Sbjct: 89 WLIEEPK 95
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 WLLDAPK 7
WL++ PK
Sbjct: 89 WLIEEPK 95
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 1 WLLDAPK 7
WL++ PK
Sbjct: 89 WLIEEPK 95
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 WLLD--APKLAG 10
W+ D APK+AG
Sbjct: 2211 WMADVPAPKIAG 2222
Query: 1 WLLDAPKLAG 10
W L APK G
Sbjct: 1502 WDLPAPKQMG 1511
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)
Query: 1 WLLDAPKL 8
W+ D P+L
Sbjct: 325 WIYDIPEL 332
>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 1 WLLDAPKL 8
W+ D P+L
Sbjct: 325 WIYDIPEL 332
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 1 WLLDAPKL 8
W+ D P+L
Sbjct: 325 WIYDIPEL 332
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 WLLDAPKL 8
W+ D P+L
Sbjct: 325 WIYDIPEL 332
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 1 WLLDAPKLA 9
WL D P L+
Sbjct: 197 WLPDDPNLS 205
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 WLLDAPKL 8
W+L PK+
Sbjct: 1705 WVLGEPKM 1712
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 WLLD--APKLAG 10
W+ D APK+AG
Sbjct: 2210 WISDVPAPKIAG 2221
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 4 DAPKLAG 10
D+P+LAG
Sbjct: 1614 DSPQLAG 1620
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 WLLDAPKL 8
+++DAP+L
Sbjct: 879 FVIDAPRL 886
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 WLLDAPK 7
WL D P+
Sbjct: 1556 WLRDTPE 1562
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 WLLDAP 6
W LD P
Sbjct: 212 WFLDLP 217
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 WLLDAPKL 8
W+LD P +
Sbjct: 3330 WILDNPHM 3337
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 WLLDAP 6
W LD P
Sbjct: 212 WFLDLP 217
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WLLDAP 6
W LD P
Sbjct: 392 WFLDLP 397
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WLLDAP 6
W LD P
Sbjct: 261 WFLDLP 266
>sp|VE2_HPV33|REGULATORY protein E2|Human papillomavirus 33
Query: 1 WLLDAPK 7
WL + PK
Sbjct: 102 WLCEPPK 108
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 WLLDAP 6
W LD P
Sbjct: 492 WFLDLP 497
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WLLDAP 6
W LD P
Sbjct: 492 WFLDLP 497
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 5 APKLAG 10
AP+LAG
Sbjct: 773 APRLAG 778
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 WLLDAP 6
W LD P
Sbjct: 492 WFLDLP 497
>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P
Query: 1 WLLDAPKLA 9
WL + P LA
Sbjct: 304 WLPNVPNLA 312
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 1 WLLDAPKL 8
W LD P L
Sbjct: 156 WYLDPPFL 163
>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P
Query: 2 LLDAPKLA 9
LLD P LA
Sbjct: 61 LLDRPSLA 68
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 WLLDAP 6
W+LD P
Sbjct: 3327 WILDNP 3332
>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)
Query: 1 WLLDAP 6
WL+D P
Sbjct: 110 WLVDTP 115
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 WLLDAP 6
W+LD P
Sbjct: 3329 WILDNP 3334
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WLLDAP 6
W LD P
Sbjct: 212 WFLDLP 217
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 WLLDAP 6
W+LD P
Sbjct: 3329 WILDNP 3334
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 WLLDAP 6
W+LD P
Sbjct: 3329 WILDNP 3334
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 WLLDAP 6
W+LD P
Sbjct: 3331 WILDNP 3336
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 WLLDAP 6
W+LD P
Sbjct: 3329 WILDNP 3334
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 WLLDAP 6
W+LD P
Sbjct: 3329 WILDNP 3334
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 WLLDAP 6
W+LD P
Sbjct: 3331 WILDNP 3336
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 2 LLDAPKL 8
L+D PKL
Sbjct: 289 LIDPPKL 295
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WLLDAP 6
W LD P
Sbjct: 492 WFLDLP 497
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WLLDAP 6
W LD P
Sbjct: 492 WFLDLP 497
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WLLDAP 6
W LD P
Sbjct: 492 WFLDLP 497
114|Sequence|566|575|PKLAGIQEFQ
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 1 PKLAGIQEF 9
PK + IQE+
Sbjct: 887 PKFSSIQEY 895
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PKLAGIQEF 9
PK + IQE+
Sbjct: 887 PKFSSIQEY 895
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 PKLAGIQE 8
P+LAG+QE
Sbjct: 1616 PQLAGLQE 1623
>sp|VE7_HPV22|PROTEIN E7|Human papillomavirus 22
Query: 3 LAGIQEFQ 10
L+GI++FQ
Sbjct: 70 LSGIRDFQ 77
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 LAGIQEFQ 10
+AGIQ F+
Sbjct: 5154 IAGIQNFK 5161
>sp|NSP4_ROTHO|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 2 KLAGIQE 8
KLAG QE
Sbjct: 81 KLAGFQE 87
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 PKLAGI 6
PK+AGI
Sbjct: 2224 PKIAGI 2229
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 4 AGIQEF 9
AGIQ+F
Sbjct: 815 AGIQQF 820
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 4 AGIQEF 9
AGIQ+F
Sbjct: 815 AGIQQF 820
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 1 PKLAGIQ 7
PK++G+Q
Sbjct: 63 PKVSGLQ 69
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 PKLAGI 6
PK+AG+
Sbjct: 2218 PKIAGV 2223
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 PKLAGI 6
PK+AG+
Sbjct: 2217 PKIAGV 2222
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 1 PKLAGIQ 7
PK++G+Q
Sbjct: 90 PKVSGLQ 96
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 1 PKLAGIQ 7
PK++G+Q
Sbjct: 64 PKVSGLQ 70
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 1 PKLAGIQ 7
PK++G+Q
Sbjct: 62 PKVSGLQ 68
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 1 PKLAGIQ 7
PK++G+Q
Sbjct: 62 PKVSGLQ 68
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 1 PKLAGIQ 7
PK++G+Q
Sbjct: 63 PKVSGLQ 69
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 1 PKLAGIQ 7
PK++G+Q
Sbjct: 88 PKVSGLQ 94
115|Sequence|571|580|IQEFQDKRSK
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 3 EFQDKRSK 10
+F+D RSK
Sbjct: 1481 QFRDNRSK 1488
>sp|VE6_HPV19|PROTEIN E6|Human papillomavirus 19
Query: 3 EFQDKR 8
EF DKR
Sbjct: 64 EFDDKR 69
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 IQEFQDKRSK 10
I + DKRS+
Sbjct: 1670 ILNYNDKRSR 1679
116|Sequence|576|585|DKRSKPTDIF
>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48
Query: 2 KRSKPTDIF 10
KR+ PTD++
Sbjct: 7 KRASPTDLY 15
>sp|US07_HCMVA|UNIQUE short US7 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 KRSKPTDI 9
KRS P DI
Sbjct: 115 KRSAPADI 122
>sp|US07_HCMVM|MEMBRANE glycoprotein US7|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 KRSKPTDI 9
KRS P DI
Sbjct: 115 KRSAPADI 122
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 KRSKPTDIF 10
+R PTD+F
Sbjct: 997 ERPDPTDVF 1005
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 KRSKPTDIF 10
+R PTD+F
Sbjct: 997 ERPDPTDVF 1005
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 KRSKPTDIF 10
+R PTD+F
Sbjct: 997 ERPDPTDVF 1005
>sp|VL2_HPV2A|MINOR capsid protein L2|Human papillomavirus type 2a
Query: 2 KRSKPTDIF 10
KR+ PTD++
Sbjct: 9 KRASPTDLY 17
>sp|VL2_HPV27|MINOR capsid protein L2|Human papillomavirus 27
Query: 2 KRSKPTDIF 10
KR+ PTD++
Sbjct: 8 KRASPTDLY 16
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 1 DKRSKPTDIF 10
D RS P ++F
Sbjct: 880 DSRSSPLELF 889
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 DKRSKPTDIF 10
D RS P ++F
Sbjct: 880 DSRSSPLELF 889
>sp|VL2_HPV57|MINOR capsid protein L2|Human papillomavirus 57
Query: 2 KRSKPTDIF 10
KR+ PTD++
Sbjct: 9 KRASPTDLY 17
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 1 DKRSKPTDIF 10
D RS P ++F
Sbjct: 881 DSRSSPLELF 890
>sp|VE7_HPV58|PROTEIN E7|Human papillomavirus 58
Query: 1 DKRSKPTDIF 10
D +PTD+F
Sbjct: 14 DLHPEPTDLF 23
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DKRSKPTDIF 10
D RS P ++F
Sbjct: 881 DSRSSPLELF 890
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 DKRSKPTDIF 10
D RS P ++F
Sbjct: 881 DSRSSPLELF 890
>sp|VL2_HPV50|MINOR capsid protein L2|Human papillomavirus type 50
Query: 2 KRSKPTDIF 10
KR+ PTD++
Sbjct: 6 KRASPTDLY 14
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 DKRSKPT 7
DKR PT
Sbjct: 520 DKRGNPT 526
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 DKRSKPT 7
DKR PT
Sbjct: 521 DKRGAPT 527
>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)
Query: 2 KRSKPTD 8
KRS+P D
Sbjct: 7 KRSEPAD 13
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 2 KRSKPTDIF 10
KR+ P DI+
Sbjct: 7 KRAAPKDIY 15
>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)
Query: 1 DKRSKPTD 8
D R+ PTD
Sbjct: 340 DSRAGPTD 347
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 KRSKPTDIF 10
++ PTD+F
Sbjct: 997 EKPDPTDVF 1005
117|Sequence|581|590|PTDIFAIGFE
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 PTDIFAIGF 9
PT +F +GF
Sbjct: 545 PTSMFMLGF 553
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 3 DIFAIGF 9
D+F +GF
Sbjct: 207 DLFGVGF 213
>sp|PG085_YLDV|PROBABLE metalloendopeptidase G1-type|Yaba-like disease virus (YLDV)
Query: 4 IFAIGFE 10
IFAIG++
Sbjct: 402 IFAIGYK 408
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 3 DIFAIGF 9
D+F IGF
Sbjct: 200 DMFDIGF 206
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 3 DIFAIGF 9
D+F IGF
Sbjct: 200 DMFDIGF 206
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 3 DIFAIGF 9
D+F IGF
Sbjct: 200 DMFDIGF 206
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 3 DIFAIGF 9
D+F IGF
Sbjct: 199 DMFDIGF 205
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 TDIFAIGFE 10
TDI+ G+E
Sbjct: 646 TDIYNDGYE 654
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 3 DIFAIGF 9
D+F IGF
Sbjct: 199 DMFDIGF 205
>sp|MATRX_PI3H4|MATRIX protein|Human parainfluenza 3 virus (strain
Query: 3 DIFAIGF 9
D+F +GF
Sbjct: 56 DVFLLGF 62
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 3 DIFAIGF 9
D+F IGF
Sbjct: 199 DMFDIGF 205
118|Sequence|586|595|AIGFEEMVEL
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 AIGFEEMVE 9
IG EEM++
Sbjct: 153 GIGLEEMID 161
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 AIGFEEMVE 9
+G+EEM++
Sbjct: 157 GLGYEEMMQ 165
>sp|NEC1_HHV7J|NUCLEAR egress protein 1|Human herpesvirus 7 (strain JI)
Query: 3 GFEEMVEL 10
GF++ VEL
Sbjct: 130 GFQKKVEL 137
119|Sequence|591|600|EMVELNAGNI
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 3 VELNAGNI 10
V LNAGNI
Sbjct: 90 VTLNAGNI 97
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 3 VELNAGNI 10
V LNAGNI
Sbjct: 90 VTLNAGNI 97
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 3 VELNAGNI 10
V LNAGNI
Sbjct: 90 VTLNAGNI 97
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 3 VELNAGNI 10
V LNAGNI
Sbjct: 90 VTLNAGNI 97
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 MVELNAGNI 10
MV+L GNI
Sbjct: 1491 MVDLQQGNI 1499
>sp|PG148_VACCC|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 2 MVELNAGN 9
MVEL +GN
Sbjct: 95 MVELGSGN 102
>sp|A20_VACCA|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 2 MVELNAGN 9
MVEL +GN
Sbjct: 95 MVELGSGN 102
>sp|PG148_MONPV|DNA polymerase processivity factor component|Monkeypox virus (MPXV)
Query: 2 MVELNAGN 9
MVEL +GN
Sbjct: 95 MVELGSGN 102
>sp|PG148_VARV|DNA polymerase processivity factor component|Variola virus
Query: 2 MVELNAGN 9
MVEL +GN
Sbjct: 95 MVELGSGN 102
>sp|PG148_VAR67|DNA polymerase processivity factor component|Variola virus (isolate
Query: 2 MVELNAGN 9
MVEL +GN
Sbjct: 95 MVELGSGN 102
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 2 MVELNAG 8
+VELN+G
Sbjct: 441 LVELNSG 447
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 2 MVELNAG 8
+VELN+G
Sbjct: 451 LVELNSG 457
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 1 EMVELNAGNI 10
+MV++ GNI
Sbjct: 200 DMVDIGFGNI 209
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 4 ELNAGNI 10
ELN GN+
Sbjct: 40 ELNLGNL 46
120|Sequence|596|605|NAGNIVSAST
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 NAGNIVSAS 9
NAGN+V AS
Sbjct: 46 NAGNLVQAS 54
>sp|C_PI1HD|PROTEIN C|Human parainfluenza 1 virus (strain
Query: 2 AGNIVSAST 10
AG+IVS++T
Sbjct: 45 AGSIVSSTT 53
>sp|C_PI1HE|PROTEIN C|Human parainfluenza 1 virus (strain
Query: 2 AGNIVSAST 10
AG+I+S++T
Sbjct: 45 AGSIISSTT 53
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 GNIVSA 8
GNIVSA
Sbjct: 2717 GNIVSA 2722
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 GNIVSA 8
GNIVSA
Sbjct: 2718 GNIVSA 2723
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 GNIVSA 8
GNIVSA
Sbjct: 2718 GNIVSA 2723
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 NAGNIVS 7
N GNIV+
Sbjct: 1663 NTGNIVA 1669
121|Sequence|601|610|VSASTTNQKL
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 2 SASTTNQKL 10
+ASTTN ++
Sbjct: 920 TASTTNMRI 928
122|Sequence|606|615|TNQKLWAVEL
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 1 TNQKLWAVE 9
T + LWAVE
Sbjct: 50 TQKLLWAVE 58
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 1 TNQKLWAVE 9
T + LWAVE
Sbjct: 50 TQKLLWAVE 58
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 3 QKLWAVE 9
QKLW +E
Sbjct: 782 QKLWTIE 788
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 3 QKLWAVE 9
QKLW +E
Sbjct: 782 QKLWTIE 788
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 3 QKLWAVE 9
QKLW +E
Sbjct: 782 QKLWTIE 788
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 2 NQKLWAVEL 10
N K W V+L
Sbjct: 461 NMKFWDVDL 469
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 TNQKLWAVE 9
T + LWA+E
Sbjct: 202 TFKTLWAIE 210
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 TNQKLWAVE 9
T + LWA+E
Sbjct: 202 TFKTLWAIE 210
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 3 QKLWAVE 9
QKLW +E
Sbjct: 716 QKLWTME 722
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 QKLWAV 8
QKLW +
Sbjct: 744 QKLWTI 749
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 QKLWAV 8
QKLW +
Sbjct: 744 QKLWTI 749
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 QKLWAV 8
QKLW +
Sbjct: 744 QKLWTI 749
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 1 TNQKLWAVE 9
T+Q+LW E
Sbjct: 97 TSQELWLAE 105
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 NQKLWAV 8
N+KLW +
Sbjct: 633 NRKLWHI 639
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 TNQKLW 6
+N KLW
Sbjct: 3898 SNSKLW 3903
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 TNQKLW 6
+N KLW
Sbjct: 3948 SNSKLW 3953
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 TNQKLW 6
+N KLW
Sbjct: 3860 SNSKLW 3865
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 TNQKLW 6
+N KLW
Sbjct: 3898 SNSKLW 3903
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 TNQKLW 6
+N KLW
Sbjct: 3948 SNSKLW 3953
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 TNQKLW 6
+N KLW
Sbjct: 3860 SNSKLW 3865
>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40
Query: 1 TNQKLWAVE 9
T+Q+LW E
Sbjct: 97 TSQELWLAE 105
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NQKLWAVEL 10
N+KLW + L
Sbjct: 12 NKKLWTLYL 20
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 NQKLW 6
NQ+LW
Sbjct: 423 NQELW 427
123|Sequence|611|620|WAVELQKTIS
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 WAVELQKTIS 10
W V LQ TIS
Sbjct: 485 WDVGLQSTIS 494
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 WAVELQKTIS 10
W V LQ TIS
Sbjct: 487 WDVGLQSTIS 496
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 WAVELQKTIS 10
W V LQ TIS
Sbjct: 487 WDVGLQSTIS 496
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 WAVELQKTIS 10
W V LQ T+S
Sbjct: 485 WDVGLQSTVS 494
>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)
Query: 1 WAVELQKTIS 10
W +EL+K I+
Sbjct: 122 WKLELEKIIA 131
>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 WAVELQKTIS 10
W +EL+K I+
Sbjct: 121 WKLELEKIIA 130
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 WAVELQKTI 9
W ++ QKTI
Sbjct: 1563 WIIDRQKTI 1571
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 1 WAVELQKTIS 10
W ++LQ+ S
Sbjct: 456 WTIDLQERFS 465
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 WAVELQKT 8
WA + QKT
Sbjct: 421 WAFKKQKT 428
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 WAVELQKT 8
WA + QKT
Sbjct: 421 WAFKKQKT 428
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 1 WAVELQKT 8
W V++QK+
Sbjct: 832 WDVDVQKS 839
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 AVELQKTIS 10
AVEL+K I+
Sbjct: 228 AVELEKLIT 236
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 2 AVELQKTIS 10
AVEL+K I+
Sbjct: 228 AVELEKLIT 236
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 1 WAVELQK 7
WAV L+K
Sbjct: 571 WAVILEK 577
124|Sequence|616|625|QKTISRDNKY
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 QKTISRD 7
++TISRD
Sbjct: 1671 RRTISRD 1677
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 QKTISRD 7
++TISRD
Sbjct: 1672 RRTISRD 1678
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 3 TISRDNK 9
T+S DNK
Sbjct: 380 TLSSDNK 386
125|Sequence|621|630|RDNKYVLLAS
>sp|GQ2_HHV6Z|GLYCOPROTEIN Q2|Human herpesvirus 6B (strain Z29)
Query: 1 RDNKYVL 7
RDN+YVL
Sbjct: 142 RDNRYVL 148
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 1 RDNKYVL 7
RDN+YVL
Sbjct: 576 RDNRYVL 582
>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49
Query: 1 RDNKYVLLAS 10
+DN Y+L A+
Sbjct: 279 QDNNYILPAA 288
>sp|SPIKE_ADE1H|FIBER protein|Human adenovirus D serotype 15/H9
Query: 2 DNKYVLLA 9
DNK LLA
Sbjct: 105 DNKLTLLA 112
>sp|SPIKE_ADE09|FIBER protein|Human adenovirus D serotype 9
Query: 2 DNKYVLLA 9
DNK LLA
Sbjct: 105 DNKLTLLA 112
>sp|SPIKE_ADE08|FIBER protein|Human adenovirus D serotype 8
Query: 2 DNKYVLLA 9
DNK LLA
Sbjct: 105 DNKLTLLA 112
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 4 KYVLLAS 10
KY LLAS
Sbjct: 376 KYALLAS 382
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 RDNKYVLLA 9
+DNK+V+ A
Sbjct: 1446 QDNKWVIPA 1454
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 RDNKYVLLAS 10
RD +Y L +S
Sbjct: 990 RDREYTLTSS 999
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 RDNKYVLLAS 10
RD +Y L +S
Sbjct: 990 RDREYTLTSS 999
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 2 DNKYVLL 8
+NK+VLL
Sbjct: 994 ENKWVLL 1000
>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 RDNKYVLL 8
RD+KY+++
Sbjct: 34 RDDKYLII 41
>sp|DNLI_VACCC|DNA ligase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RDNKYVLL 8
RD+KY+++
Sbjct: 34 RDDKYLII 41
>sp|DNLI_VARV|DNA ligase|Variola virus
Query: 1 RDNKYVLL 8
RD+KY+++
Sbjct: 34 RDDKYLII 41
>sp|DNLI_VAR67|DNA ligase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 RDNKYVLL 8
RD+KY+++
Sbjct: 34 RDDKYLII 41
>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 2 DNKYVLL 8
DN Y+LL
Sbjct: 402 DNNYILL 408
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 DNKYVLLAS 10
D+KYVL S
Sbjct: 5335 DHKYVLSVS 5343
126|Sequence|626|635|VLLASEQLVG
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VLLASEQL 8
+LLA EQL
Sbjct: 2851 ILLAQEQL 2858
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VLLASEQL 8
+LLA EQL
Sbjct: 2851 ILLAQEQL 2858
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VLLASEQL 8
+LLA EQL
Sbjct: 2851 ILLAQEQL 2858
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VLLASEQL 8
+LLA EQL
Sbjct: 2851 ILLAQEQL 2858
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VLLASEQL 8
+LLA EQL
Sbjct: 2851 ILLAQEQL 2858
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VLLASEQL 8
+LLA EQL
Sbjct: 2851 ILLAQEQL 2858
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VLLASEQL 8
+LLA EQL
Sbjct: 2851 ILLAQEQL 2858
127|Sequence|631|640|EQLVGVCLFV
>sp|U23_HHV6Z|PROTEIN U23|Human herpesvirus 6B (strain Z29)
Query: 3 LVGVCLF 9
++G+C+F
Sbjct: 14 MIGICVF 20
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 EQLVGVCLFV 10
E +CLFV
Sbjct: 855 EGYTSICLFV 864
>sp|PG139_VARV|VIRION membrane protein OPG139|Variola virus
Query: 3 LVGVCLFV 10
L+G+C+ V
Sbjct: 7 LIGICVAV 14
>sp|PG139_VAR67|VIRION membrane protein OPG139|Variola virus (isolate
Query: 3 LVGVCLFV 10
L+G+C+ V
Sbjct: 7 LIGICVAV 14
>sp|VIF_HV1S2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 EQLVGVCLF 9
+QL+ +C F
Sbjct: 104 DQLIHMCYF 112
128|Sequence|636|645|VCLFVFIRPQ
>sp|DNLI_VARV|DNA ligase|Variola virus
Query: 1 VCLFVF 6
+CLFVF
Sbjct: 312 MCLFVF 317
>sp|DNLI_VAR67|DNA ligase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 VCLFVF 6
+CLFVF
Sbjct: 312 MCLFVF 317
>sp|DNLI_VACCC|DNA ligase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VCLFVF 6
+CLFVF
Sbjct: 312 MCLFVF 317
>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 VCLFVF 6
+CLFVF
Sbjct: 312 MCLFVF 317
>sp|DNLI_MONPV|DNA ligase|Monkeypox virus (MPXV)
Query: 1 VCLFVF 6
+CLFVF
Sbjct: 314 MCLFVF 319
>sp|BVLF1_EBVB9|LATE gene expression regulator BVLF1|Epstein-Barr virus (strain B95-8)
Query: 1 VCLFVFIRP 9
+CLF+ RP
Sbjct: 109 LCLFLHDRP 117
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 CLFVFIRPQ 10
CL++ ++PQ
Sbjct: 1861 CLWLELKPQ 1869
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 CLFVFIRPQ 10
CL++ ++PQ
Sbjct: 1861 CLWLELKPQ 1869
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 CLFVFIRPQ 10
CL++ ++PQ
Sbjct: 1862 CLWLELKPQ 1870
>sp|UL58_HCMVA|UNCHARACTERIZED protein UL58|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VCLFVFIRP 9
+C+F+F P
Sbjct: 103 LCVFIFPSP 111
>sp|E1BS_ADE12|E1B protein, small T-antigen|Human adenovirus A serotype 12
Query: 1 VCLFVFIRP 9
VC++ RP
Sbjct: 131 VCIYSLARP 139
>sp|VE5_HPV58|PROBABLE protein E5|Human papillomavirus 58
Query: 1 VCLFVFIRP 9
+CL +F+RP
Sbjct: 14 LCLCIFLRP 22
129|Sequence|641|650|FIRPQHAPFI
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 3 RPQHAPFI 10
+P HAPF+
Sbjct: 401 KPGHAPFL 408
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 3 RPQHAPFI 10
+P HAPF+
Sbjct: 401 KPGHAPFL 408
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 1 FIRPQHAPFI 10
F+R QH FI
Sbjct: 428 FLRYQHVDFI 437
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 1 FIRPQHAPFI 10
F+R QH FI
Sbjct: 435 FLRFQHVNFI 444
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 IRPQHAPFI 10
I P HAP++
Sbjct: 1556 ITPIHAPYL 1564
>sp|VP2_POVWU|MINOR capsid protein VP2|WU polyomavirus (WUPyV)
Query: 3 RPQHAPF 9
+P HAP+
Sbjct: 135 KPLHAPY 141
>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 RPQHAPFI 10
+P+ APF+
Sbjct: 266 KPEDAPFV 273
>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 RPQHAPFI 10
+P+ APF+
Sbjct: 266 KPEDAPFV 273
>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 RPQHAPFI 10
+P+ APF+
Sbjct: 266 KPEDAPFV 273
>sp|CAPSD_HBVB3|CAPSID protein|Hepatitis B virus genotype B2
Query: 3 RPQHAPFI 10
RPQ+AP +
Sbjct: 133 RPQNAPIL 140
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 2 IRPQHAP 8
+ PQH P
Sbjct: 101 LSPQHKP 107
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 4 PQHAPF 9
P HAPF
Sbjct: 910 PGHAPF 915
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 4 PQHAP 8
P+HAP
Sbjct: 667 PRHAP 671
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 4 PQHAP 8
P+HAP
Sbjct: 667 PRHAP 671
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 2 IRPQHAPF 9
+RP+ PF
Sbjct: 953 LRPESVPF 960
>sp|NEC2_VZVD|NUCLEAR egress protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 FIRPQHAP 8
F RP +AP
Sbjct: 100 FFRPTNAP 107
>sp|VP2_POVKI|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 350)
Query: 3 RPQHAPF 9
+P HAP+
Sbjct: 135 KPIHAPY 141
>sp|VP2_POVK6|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 60)
Query: 3 RPQHAPF 9
+P HAP+
Sbjct: 135 KPIHAPY 141
>sp|VP2_POVK3|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 380)
Query: 3 RPQHAPF 9
+P HAP+
Sbjct: 135 KPIHAPY 141
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 1 FIRPQHAPFI 10
FIR AP +
Sbjct: 1093 FIRTSDAPLV 1102
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 1 FIRPQHAPFI 10
FIR AP +
Sbjct: 1093 FIRTSDAPLV 1102
>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 RPQHAPFI 10
RP+H P +
Sbjct: 197 RPRHDPVL 204
>sp|VL2_HPV52|MINOR capsid protein L2|Human papillomavirus 52
Query: 4 PQHAPFI 10
P H PF+
Sbjct: 415 PTHTPFV 421
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 RPQHAPFI 10
RP APF+
Sbjct: 794 RPPQAPFV 801
>sp|NEC2_HHV11|NUCLEAR egress protein 2|Human herpesvirus 1 (strain 17)
Query: 1 FIRPQHAP 8
F RP +AP
Sbjct: 100 FHRPHNAP 107
130|Sequence|646|655|HAPFIRDVAV
>sp|PG187_VAR67|B1 kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 HAPFIRD 7
H PFIR+
Sbjct: 180 HVPFIRN 186
>sp|PG187_VACCC|B1 kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HAPFIRD 7
H PFIR+
Sbjct: 180 HVPFIRN 186
>sp|PG187_VACCA|B1 kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 HAPFIRD 7
H PFIR+
Sbjct: 180 HVPFIRN 186
>sp|PG187_MONPV|B1 kinase|Monkeypox virus (MPXV)
Query: 1 HAPFIRD 7
H PFIR+
Sbjct: 180 HVPFIRN 186
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 APFIRDV 8
AP++RDV
Sbjct: 2691 APYMRDV 2697
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 PFIRD 7
PFIRD
Sbjct: 2143 PFIRD 2147
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 PFIRD 7
PFIRD
Sbjct: 2100 PFIRD 2104
>sp|US12_HCMVA|UNCHARACTERIZED protein HVLF6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 APFIRD 7
AP++RD
Sbjct: 82 APYLRD 87
>sp|UL121_HCMVM|MEMBRANE protein UL121|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HAPFIRDV 8
H P +RD+
Sbjct: 127 HLPTLRDI 134
>sp|UL121_HCMVA|MEMBRANE protein UL121|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HAPFIRDV 8
H P +RD+
Sbjct: 127 HLPTLRDI 134
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PFIRDVAV 10
PF+ +VAV
Sbjct: 1012 PFVHNVAV 1019
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 3 PFIRDVAV 10
PF+ +VAV
Sbjct: 985 PFVHNVAV 992
>sp|GD_HHV2H|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain HG52)
Query: 1 HAPFIRDVA 9
H P I+DVA
Sbjct: 320 HIPSIQDVA 328
>sp|GD_HHV23|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain 333)
Query: 1 HAPFIRDVA 9
H P I+DVA
Sbjct: 320 HIPSIQDVA 328
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 3 PFIRDVA 9
PF +DVA
Sbjct: 1038 PFAQDVA 1044
131|Sequence|651|660|RDVAVDTVKT
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 2 DVAVDTVK 9
DVAV TVK
Sbjct: 81 DVAVQTVK 88
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 1 RDVAVDTVKT 10
RD+ VD+V+T
Sbjct: 397 RDMLVDSVET 406
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RDVAVDTVKT 10
RD+ VD+V+T
Sbjct: 397 RDMLVDSVET 406
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 1 RDVAVDTVKT 10
RD+ VD+V+T
Sbjct: 397 RDMLVDSVET 406
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 RDVAVDTVKT 10
RD+ VD+V+T
Sbjct: 397 RDMLVDSVET 406
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 VAVDTVKT 10
V VDTV+T
Sbjct: 1164 VCVDTVRT 1171
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 VAVDTVKT 10
V VDTV+T
Sbjct: 1164 VCVDTVRT 1171
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 RDVAVDTV 8
RD+ +DT+
Sbjct: 235 RDMGIDTL 242
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 1 RDVAVDTV 8
RD+ +DT+
Sbjct: 235 RDMGIDTL 242
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 1 RDVAVDTV 8
+ +AVDTV
Sbjct: 141 KTIAVDTV 148
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 RDVAVDTV 8
+ +AVDTV
Sbjct: 464 KTIAVDTV 471
132|Sequence|656|665|DTVKTGMGGA
>sp|U17_HHV6Z|PROTEIN U17|Human herpesvirus 6B (strain Z29)
Query: 1 DTVKTGMG 8
DT+ TG+G
Sbjct: 263 DTIGTGIG 270
>sp|U16_HHV6U|PROTEIN U17/U16|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DTVKTGMG 8
DT+ TG+G
Sbjct: 263 DTIGTGIG 270
>sp|U16_HHV6G|PROTEIN U17/U16|Human herpesvirus 6A (strain GS)
Query: 1 DTVKTGMG 8
DT+ TG+G
Sbjct: 263 DTIGTGIG 270
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 2 TVKTGMGGA 10
+VKT GGA
Sbjct: 477 SVKTTWGGA 485
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 3 VKTGMGG 9
V+TG+GG
Sbjct: 463 VETGIGG 469
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 3 VKTGMGG 9
V+TG+GG
Sbjct: 450 VETGIGG 456
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 6 GMGGA 10
GMGGA
Sbjct: 1022 GMGGA 1026
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 GMGGA 10
GMGGA
Sbjct: 1023 GMGGA 1027
133|Sequence|661|670|GMGGATGNKG
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GMGGATGN 8
G+GG GN
Sbjct: 313 GIGGTAGN 320
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 GMGGATGN 8
GMG A GN
Sbjct: 243 GMGVAVGN 250
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 GMGGATGN 8
GMG A GN
Sbjct: 244 GMGVAVGN 251
>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P
Query: 1 GMGGATGNKG 10
MG A NKG
Sbjct: 439 AMGSAKFNKG 448
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 GMGGATGNK 9
G GG +G+K
Sbjct: 1038 GKGGHSGSK 1046
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 GMGGATGNK 9
G GG +G+K
Sbjct: 1043 GKGGHSGSK 1051
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 1 GMGGATGNK 9
G GG +G+K
Sbjct: 1043 GKGGHSGSK 1051
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 1 GMGGATGNK 9
G GG +G+K
Sbjct: 1043 GKGGHSGSK 1051
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 GMGGATGNK 9
G GG +G+K
Sbjct: 1043 GKGGHSGSK 1051
134|Sequence|666|675|TGNKGAVAIR
>sp|SF33K_ADE41|PROTEIN 33K|Human adenovirus F serotype 41
Query: 2 GNKGAVAIR 10
GNK A+A R
Sbjct: 5 GNKQAIADR 13
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 GNKGA 6
GNKGA
Sbjct: 127 GNKGA 131
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 GNKGA 6
GNKGA
Sbjct: 127 GNKGA 131
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 GNKGA 6
GNKGA
Sbjct: 127 GNKGA 131
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 GNKGA 6
GNKGA
Sbjct: 127 GNKGA 131
>sp|VP6_ROTGA|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 TGNKGAV 7
+GNKG V
Sbjct: 186 SGNKGVV 192
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 2 GNKGAVAIR 10
G++GA A+R
Sbjct: 668 GDEGAAALR 676
135|Sequence|671|680|AVAIRMLFHT
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 AVAIRMLFHT 10
A+A+R +F T
Sbjct: 1762 ALALRTIFRT 1771
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 1 AVAIRMLFHT 10
AVA R+LF++
Sbjct: 78 AVARRLLFNS 87
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 1 AVAIRMLFHT 10
AVA R+LF++
Sbjct: 78 AVARRLLFNS 87
>sp|GL_HHV7J|ENVELOPE glycoprotein L|Human herpesvirus 7 (strain JI)
Query: 5 RMLFHT 10
R+L+HT
Sbjct: 65 RLLYHT 70
136|Sequence|676|685|MLFHTTSLCF
>sp|NS3_CVHNL|NON-STRUCTURAL protein 3|Human coronavirus NL63 (HCoV-NL63)
Query: 1 MLFHTTSLCF 10
+LF+ T LCF
Sbjct: 123 VLFNVTKLCF 132
>sp|UL24_HHV11|PROTEIN UL24|Human herpesvirus 1 (strain 17)
Query: 3 FHTTSLC 9
FH T +C
Sbjct: 36 FHATKIC 42
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 1 MLFHTTSLCF 10
+LF TT+L F
Sbjct: 14 VLFRTTTLIF 23
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 1 MLFHTTSLCF 10
+LF TT+L F
Sbjct: 14 VLFRTTTLIF 23
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 1 MLFHTTSLCF 10
+LF TT+L F
Sbjct: 14 VLFRTTTLIF 23
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 3 FHTTSLCF 10
+H T+ CF
Sbjct: 168 YHVTNFCF 175
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 FHTTSLCF 10
+H SLC
Sbjct: 2134 YHVRSLCL 2141
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 MLFHTTSL 8
+LFHT +L
Sbjct: 395 ILFHTGAL 402
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 1 MLFHTTSL 8
+LFHT+ L
Sbjct: 459 VLFHTSLL 466
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 1 MLFHTTSL 8
+LFHT+ L
Sbjct: 459 VLFHTSLL 466
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 1 MLFHTTSL 8
+LFHT+ L
Sbjct: 459 VLFHTSLL 466
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 MLFHTTSL 8
+LFHT+ L
Sbjct: 459 VLFHTSLL 466
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 MLFHTTSL 8
+LFHT+ L
Sbjct: 459 VLFHTSLL 466
>sp|RL12_HCMVM|UNCHARACTERIZED protein RL12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 HTTSLC 9
HTT LC
Sbjct: 322 HTTPLC 327
137|Sequence|681|690|TSLCFVCSHF
>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)
Query: 1 TSLCFVCS 8
T+LC VCS
Sbjct: 167 TTLCTVCS 174
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TSLCFVCS 8
+ LCF CS
Sbjct: 66 SELCFYCS 73
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TSLCFVCS 8
+ LCF CS
Sbjct: 66 SELCFYCS 73
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 SLCFVCSH 9
SLC C H
Sbjct: 762 SLCLFCYH 769
>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 SLCFVCS 8
+ CFVC+
Sbjct: 10 TCCFVCA 16
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LCFVCS 8
LC VCS
Sbjct: 9 LCVVCS 14
>sp|UL87_HHV7J|PROTEIN U58|Human herpesvirus 7 (strain JI)
Query: 3 LCFVCSHF 10
LC++C H
Sbjct: 193 LCYLCKHL 200
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LCFVCS 8
LC VCS
Sbjct: 9 LCVVCS 14
>sp|DUT_HHV7J|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 7 (strain JI)
Query: 2 SLCFVCSHF 10
++ F C HF
Sbjct: 342 TIIFTCGHF 350
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LCFVCSHF 10
LC++C H
Sbjct: 194 LCYLCRHL 201
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain
Query: 3 LCFVC 7
CFVC
Sbjct: 39 FCFVC 43
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 CFVC 7
CFVC
Sbjct: 2222 CFVC 2225
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 CFVC 7
CFVC
Sbjct: 2222 CFVC 2225
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 CFVC 7
CFVC
Sbjct: 2219 CFVC 2222
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 CFVC 7
CFVC
Sbjct: 2221 CFVC 2224
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 1 TSLCFVCSHF 10
TS+C SHF
Sbjct: 513 TSVCVRTSHF 522
>sp|DUT_HHV6U|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 3 LCFVCSHF 10
+ F C HF
Sbjct: 337 IIFTCGHF 344
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 3 LCFVCSHF 10
L F CSH+
Sbjct: 516 LTFSCSHY 523
>sp|DUT_HHV6G|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 3 LCFVCSHF 10
+ F C HF
Sbjct: 337 IIFTCGHF 344
>sp|VEMP_CVHNL|ENVELOPE small membrane protein|Human coronavirus NL63 (HCoV-NL63)
Query: 3 LCFVCSHF 10
LCF C +F
Sbjct: 38 LCFTCHYF 45
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 LCFVCSHF 10
L F CSH+
Sbjct: 515 LTFSCSHY 522
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 CFVC 7
CF+C
Sbjct: 2221 CFIC 2224
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 CFVC 7
CF+C
Sbjct: 2221 CFIC 2224
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 CFVC 7
CF+C
Sbjct: 2221 CFIC 2224
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 CFVC 7
CF+C
Sbjct: 2221 CFIC 2224
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 CFVC 7
CF+C
Sbjct: 2221 CFIC 2224
>sp|VE6_HPV25|PROTEIN E6|Human papillomavirus 25
Query: 3 LCFVCSHF 10
+C +C HF
Sbjct: 150 ICRLCKHF 157
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 2 SLCFVCSHF 10
SLC +CS
Sbjct: 6 SLCVLCSRL 14
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 SLCFVC 7
+LC VC
Sbjct: 13 NLCIVC 18
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 SLCFVC 7
+LC VC
Sbjct: 13 NLCIVC 18
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SLCFVC 7
+LC VC
Sbjct: 13 NLCIVC 18
>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)
Query: 1 TSLCFVCSH 9
TSL + C H
Sbjct: 178 TSLHYYCKH 186
>sp|VE6_HPV19|PROTEIN E6|Human papillomavirus 19
Query: 2 SLCFVCSHF 10
+C +C HF
Sbjct: 154 GICRLCKHF 162
>sp|VE6_HPV20|PROTEIN E6|Human papillomavirus 20
Query: 2 SLCFVCSHF 10
+C +C HF
Sbjct: 156 GICRLCKHF 164
>sp|VE6_HPV21|PROTEIN E6|Human papillomavirus 21
Query: 2 SLCFVCSHF 10
+C +C HF
Sbjct: 159 GICRLCKHF 167
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LCFVCSH 9
LCF CS+
Sbjct: 225 LCFKCSY 231
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LCFVCSH 9
LCF CS+
Sbjct: 225 LCFKCSY 231
138|Sequence|686|695|VCSHFAAGQS
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 VCSHFAAGQS 10
+C+H GQ+
Sbjct: 4298 LCTHTGTGQA 4307
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 VCSHFAAGQS 10
+C+H GQ+
Sbjct: 4298 LCTHTGTGQA 4307
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 VCSHFAAGQS 10
+C+H GQ+
Sbjct: 4275 LCTHTGTGQA 4284
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 VCSHFAAGQS 10
+C+H GQ+
Sbjct: 4275 LCTHTGTGQA 4284
>sp|VE2_HPV61|REGULATORY protein E2|Human papillomavirus type 61
Query: 4 HFAAGQS 10
H+A GQS
Sbjct: 335 HWAGGQS 341
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 2 CSHF 5
CSHF
Sbjct: 506 CSHF 509
>sp|VPR_HV2D2|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 2 CSHFAAGQS 10
C H GQS
Sbjct: 81 CQHSRIGQS 89
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 VCSHFAA 7
VCS++AA
Sbjct: 818 VCSNYAA 824
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 VCSHFAA 7
VCS++AA
Sbjct: 818 VCSNYAA 824
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 1 VCSHFAA 7
VCS++AA
Sbjct: 822 VCSNYAA 828
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 4 HFAAG 8
HFAAG
Sbjct: 605 HFAAG 609
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 4 HFAAG 8
HFAAG
Sbjct: 605 HFAAG 609
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 CSHFAAGQ 9
CS+ AAG+
Sbjct: 413 CSNSAAGR 420
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 4 HFAAG 8
HFAAG
Sbjct: 605 HFAAG 609
>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain
Query: 1 VCSHFAAGQ 9
VC F GQ
Sbjct: 293 VCGPFRTGQ 301
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 2 CSHF 5
CSHF
Sbjct: 505 CSHF 508
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 4 HFAAG 8
HFAAG
Sbjct: 605 HFAAG 609
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 4 HFAAG 8
HFAAG
Sbjct: 605 HFAAG 609
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 4 HFAAG 8
HFAAG
Sbjct: 605 HFAAG 609
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 4 HFAAG 8
HFAAG
Sbjct: 605 HFAAG 609
139|Sequence|691|700|AAGQSQVKER
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 AGQSQVKE 9
AGQS V+E
Sbjct: 524 AGQSAVRE 531
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 AAGQSQVKE 9
AAGQ VKE
Sbjct: 1317 AAGQQFVKE 1325
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 AAGQSQVKE 9
AAGQ VKE
Sbjct: 1317 AAGQQFVKE 1325
140|Sequence|696|705|QVKERNEDFI
>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82
Query: 1 QVKERNEDFI 10
QVK N DFI
Sbjct: 235 QVKVTNPDFI 244
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 1 QVKERNEDFI 10
QVK N DFI
Sbjct: 234 QVKVTNPDFI 243
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 2 VKERNEDFI 10
+ +RNE+F+
Sbjct: 697 IMDRNENFL 705
>sp|VL2_HPV49|MINOR capsid protein L2|Human papillomavirus type 49
Query: 2 VKERNEDF 9
+ E+NEDF
Sbjct: 427 LDEQNEDF 434
>sp|M1_DHVI1|MATRIX protein 1|Dhori virus (strain Indian/1313/61) (Dho)
Query: 2 VKERNEDF 9
VK+R EDF
Sbjct: 201 VKQRIEDF 208
>sp|VL2_HPV70|MINOR capsid protein L2|Human papillomavirus type 70
Query: 1 QVKERNEDFI 10
QV+ N DF+
Sbjct: 233 QVRVNNFDFV 242
141|Sequence|701|710|NEDFIEIARK
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 NEDFIEIARK 10
NEDF ARK
Sbjct: 391 NEDFYNDARK 400
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 EDFIEIAR 9
ED++E+ R
Sbjct: 2086 EDYVEVVR 2093
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 EDFIEIAR 9
E+++E+AR
Sbjct: 2090 EEYVEVAR 2097
>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)
Query: 2 EDFIEI 7
EDFIE+
Sbjct: 432 EDFIEV 437
>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 2 EDFIEI 7
EDFIE+
Sbjct: 432 EDFIEV 437
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 EDFIEIAR 9
+DF+EIA+
Sbjct: 435 KDFLEIAQ 442
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 2 EDFIEIAR 9
+DF+EIA+
Sbjct: 435 KDFLEIAQ 442
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 EDFIEIAR 9
+DF+EIA+
Sbjct: 435 KDFLEIAQ 442
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 2 EDFIEIAR 9
+DF+EIA+
Sbjct: 435 KDFLEIAQ 442
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 2 EDFIEIAR 9
+DF+EIA+
Sbjct: 435 KDFLEIAQ 442
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 EDFIEIAR 9
+DF+EIA+
Sbjct: 433 KDFLEIAQ 440
>sp|MC132_MCV1|PROTEIN MC132|Molluscum contagiosum virus subtype 1
Query: 1 NEDFI-EIARK 10
NEDF E+AR+
Sbjct: 16 NEDFFEELARE 26
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 EDFIEIAR 9
ED++E+ R
Sbjct: 2092 EDYVEVRR 2099
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 EDFIEIAR 9
ED++E+ R
Sbjct: 2088 EDYVEVRR 2095
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 EDFIEIAR 9
ED++E+ R
Sbjct: 2093 EDYVEVRR 2100
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 NEDFIEI 7
NED +EI
Sbjct: 447 NEDLLEI 453
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 NEDFIEI 7
NED +EI
Sbjct: 447 NEDLLEI 453
Query: 2 EDFIEIAR 9
+DF+EI +
Sbjct: 6729 DDFVEIIK 6736
>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)
Query: 2 EDFIEI 7
EDF+E+
Sbjct: 432 EDFVEV 437
>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)
Query: 2 EDFIEI 7
EDF+E+
Sbjct: 432 EDFVEV 437
>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)
Query: 2 EDFIEI 7
EDF+E+
Sbjct: 432 EDFVEV 437
>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)
Query: 2 EDFIEI 7
EDF+E+
Sbjct: 432 EDFVEV 437
>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins
Query: 2 EDFIEI 7
EDF+E+
Sbjct: 432 EDFVEV 437
>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)
Query: 2 EDFIEI 7
EDF+E+
Sbjct: 432 EDFVEV 437
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 2 EDFIEI 7
EDF+E+
Sbjct: 432 EDFVEV 437
>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)
Query: 2 EDFIEI 7
EDF+E+
Sbjct: 432 EDFVEV 437
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 2 EDFIEI 7
EDF+E+
Sbjct: 432 EDFVEV 437
>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)
Query: 2 EDFIEI 7
EDF+E+
Sbjct: 432 EDFVEV 437
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 2 EDFIEI 7
EDF+E+
Sbjct: 432 EDFVEV 437
>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 2 EDFIEI 7
EDF+E+
Sbjct: 432 EDFVEV 437
>sp|PG078_VARV|PROTEIN OPG078|Variola virus
Query: 3 DFIEIAR 9
DFIEI +
Sbjct: 22 DFIEIVK 28
>sp|PG078_VAR67|PROTEIN OPG078|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 DFIEIAR 9
DFIEI +
Sbjct: 22 DFIEIVK 28
>sp|PG078_VACCP|PROTEIN OPG078|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 DFIEIAR 9
DFIEI +
Sbjct: 22 DFIEIVK 28
>sp|PG078_VACCC|PROTEIN OPG078|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 DFIEIAR 9
DFIEI +
Sbjct: 22 DFIEIVK 28
>sp|PG078_MONPV|PROTEIN OPG078|Monkeypox virus (MPXV)
Query: 3 DFIEIAR 9
DFIEI +
Sbjct: 22 DFIEIVK 28
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 NEDFIEIA 8
N DFIE A
Sbjct: 302 NRDFIEGA 309
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 NEDFIEIA 8
N DFIE A
Sbjct: 302 NRDFIEGA 309
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 NEDFIEIA 8
N DFIE A
Sbjct: 302 NRDFIEGA 309
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 NEDFIEIA 8
N DFIE A
Sbjct: 302 NRDFIEGA 309
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 NEDFIEIA 8
N DFIE A
Sbjct: 230 NRDFIEGA 237
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 NEDFIEIA 8
N DFIE A
Sbjct: 302 NRDFIEGA 309
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 NEDFIEIA 8
N DFIE A
Sbjct: 302 NRDFIEGA 309
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 NEDFIEIA 8
N DFIE A
Sbjct: 302 NRDFIEGA 309
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 NEDFIEIA 8
N DFIE A
Sbjct: 302 NRDFIEGA 309
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 NEDFIE 6
N DFIE
Sbjct: 294 NRDFIE 299
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 NEDFIEIA 8
N+D+ EIA
Sbjct: 60 NDDYQEIA 67
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 NEDFIEIA 8
N+D+ EIA
Sbjct: 60 NDDYQEIA 67
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 EDFIEIAR 9
+DF+EI +
Sbjct: 6752 DDFVEIIK 6759
Query: 1 NEDFIEIARK 10
N D +E A+K
Sbjct: 1042 NADIVEEAKK 1051
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 NEDFIEIARK 10
N D +E A+K
Sbjct: 1042 NADIVEEAKK 1051
142|Sequence|706|715|EIARKLSFPM
>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 EIARKLSFPM 10
E+ +KL+ PM
Sbjct: 208 ELNKKLTVPM 217
>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)
Query: 1 EIARKLSFPM 10
E+ +KL+ PM
Sbjct: 208 ELNKKLTVPM 217
>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)
Query: 4 RKLSFP 9
RKL+FP
Sbjct: 305 RKLAFP 310
>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain
Query: 4 RKLSFP 9
RKL+FP
Sbjct: 305 RKLAFP 310
>sp|ORF24_TTVV1|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (strain VT416)
Query: 4 RKLSFP 9
RKL+FP
Sbjct: 142 RKLTFP 147
>sp|ORF24_TTVV2|ORF2/4 protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 4 RKLSFP 9
RKL+FP
Sbjct: 142 RKLTFP 147
143|Sequence|711|720|LSFPMGRMLF
>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)
Query: 4 PMGRMLF 10
P+G MLF
Sbjct: 780 PVGNMLF 786
>sp|ICP0_HHV11|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 1 (strain 17)
Query: 4 PMGRMLF 10
P+G MLF
Sbjct: 735 PVGNMLF 741
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 1 LSFPMGRMLF 10
+S P G MLF
Sbjct: 238 VSEPYGDMLF 247
144|Sequence|716|725|GRMLFSHDYV
>sp|VL2_HPV34|MINOR capsid protein L2|Human papillomavirus type 34
Query: 1 GRMLFSHDYV 10
GR+LFS+D V
Sbjct: 184 GRLLFSNDTV 193
Query: 1 GRMLFSHD 8
GR+ F HD
Sbjct: 324 GRVHFYHD 331
>sp|PG043_MONPV|MONOGLYCERIDE lipase homolog|Monkeypox virus (MPXV)
Query: 1 GRMLFSHDYV 10
G ++FSHD++
Sbjct: 53 GILVFSHDHI 62
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 GRMLFSHD 8
GR+L SHD
Sbjct: 288 GRILLSHD 295
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 1 GRMLFSHD 8
GR+L SHD
Sbjct: 288 GRILLSHD 295
>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)
Query: 1 GRMLFSHD 8
GR+ FS+D
Sbjct: 655 GRLFFSND 662
>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 GRMLFSHD 8
GR+ FS+D
Sbjct: 655 GRLFFSND 662
>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann
Query: 1 GRMLFSHD 8
GR+ FS+D
Sbjct: 655 GRLFFSND 662
>sp|K6_VACCC|PROTEIN K6|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GRMLFSHDYV 10
G ++FSHD++
Sbjct: 50 GILVFSHDHI 59
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 LFSHDYV 10
L+S+DYV
Sbjct: 3415 LYSYDYV 3421
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 LFSHDYV 10
L+S+DYV
Sbjct: 3415 LYSYDYV 3421
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 1 GRMLFSHD 8
GR FS+D
Sbjct: 655 GRFFFSND 662
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 MLFSHDYV 10
+LF+ DYV
Sbjct: 1343 ILFTSDYV 1350
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 MLFSHDYV 10
+LF+ DYV
Sbjct: 1335 ILFTSDYV 1342
>sp|CVC1_HHV8P|CAPSID vertex component 1|Human herpesvirus 8 type P
Query: 4 LFSHD 8
LFSHD
Sbjct: 85 LFSHD 89
>sp|VL2_HPV43|MINOR capsid protein L2|Human papillomavirus 43
Query: 1 GRMLFSHDYV 10
GR++ SH V
Sbjct: 183 GRIIISHSTV 192
>sp|VL2_HPV45|MINOR capsid protein L2|Human papillomavirus 45
Query: 1 GRMLFSHD 8
GR+ F HD
Sbjct: 315 GRVHFYHD 322
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 4 LFSHDYV 10
LFS DY+
Sbjct: 10 LFSEDYL 16
>sp|VL2_HPV32|MINOR capsid protein L2|Human papillomavirus type 32
Query: 1 GRMLFSH 7
GR+L SH
Sbjct: 182 GRLLTSH 188
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 GRMLFSHDY 9
G ML H Y
Sbjct: 760 GEMLVEHGY 768
>sp|VL2_HPV40|MINOR capsid protein L2|Human papillomavirus 40
Query: 1 GRMLFSHDYV 10
GR++ SH +
Sbjct: 182 GRLIVSHSTI 191
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 5 FSHDYV 10
F HDYV
Sbjct: 317 FLHDYV 322
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 FSHDYV 10
F HDYV
Sbjct: 317 FLHDYV 322
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 FSHDYV 10
F HDYV
Sbjct: 317 FLHDYV 322
145|Sequence|721|730|SHDYVFWCGD
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 SHDYVFW 7
SH+Y+FW
Sbjct: 1991 SHNYLFW 1997
>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain
Query: 1 SHDYVFWC 8
SH++V WC
Sbjct: 194 SHEHVDWC 201
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 DYVFW 7
DYVFW
Sbjct: 187 DYVFW 191
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 DYVFW 7
DYVFW
Sbjct: 187 DYVFW 191
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 1 SHDYVFWCGD 10
+HDY W D
Sbjct: 191 NHDYTLWLPD 200
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 3 DYVFW 7
DYVFW
Sbjct: 444 DYVFW 448
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 DYVFW 7
DY+FW
Sbjct: 188 DYIFW 192
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 DYVFW 7
DY+FW
Sbjct: 188 DYIFW 192
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 DYVFW 7
DY+FW
Sbjct: 187 DYIFW 191
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 DYVFW 7
DY+FW
Sbjct: 187 DYIFW 191
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 5 VFWCG 9
V+WCG
Sbjct: 358 VYWCG 362
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 HDYVFWCGD 10
HD W GD
Sbjct: 1767 HDLGLWTGD 1775
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 HDYVFWCGD 10
HD W GD
Sbjct: 1768 HDLGLWTGD 1776
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 HDYVFWCG 9
H++ F+CG
Sbjct: 268 HNFGFYCG 275
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 HDYVFWCG 9
H++ F+CG
Sbjct: 268 HNFGFYCG 275
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 HDYVFWCG 9
H++ F+CG
Sbjct: 268 HNFGFYCG 275
>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 1 SHDYVFW 7
+HDY W
Sbjct: 191 NHDYTLW 197
>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)
Query: 1 SHDYVFW 7
+HDY W
Sbjct: 191 NHDYTIW 197
>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)
Query: 1 SHDYVFW 7
+HDY W
Sbjct: 191 NHDYTIW 197
>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)
Query: 1 SHDYVFW 7
+HDY W
Sbjct: 191 NHDYTIW 197
>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 SHDYVFW 7
+HDY W
Sbjct: 191 NHDYTLW 197
Query: 1 SHDYVFWC 8
+H+ V WC
Sbjct: 264 NHEEVKWC 271
>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)
Query: 1 SHDYVFW 7
+HDY W
Sbjct: 191 NHDYTIW 197
>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins
Query: 1 SHDYVFW 7
+HDY W
Sbjct: 191 NHDYTIW 197
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 1 SHDYVFW 7
+HDY W
Sbjct: 191 NHDYTIW 197
>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)
Query: 1 SHDYVFW 7
+HDY W
Sbjct: 191 NHDYTIW 197
>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 1 SHDYVFW 7
+HDY W
Sbjct: 191 NHDYTIW 197
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 1 SHDYVFW 7
+HDY W
Sbjct: 191 NHDYTIW 197
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 4 YVFWCGD 10
Y+ WC D
Sbjct: 335 YIGWCAD 341
>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)
Query: 1 SHDYVFW 7
+HDY W
Sbjct: 191 NHDYTIW 197
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 3 DYVFW 7
DY+FW
Sbjct: 473 DYMFW 477
>sp|PG029_VARV|IFN signaling evasion protein OPG029|Variola virus
Query: 2 HDYVFW 7
HDY+ W
Sbjct: 22 HDYICW 27
>sp|PG029_VAR67|IFN signaling evasion protein OPG029|Variola virus (isolate
Query: 2 HDYVFW 7
HDY+ W
Sbjct: 22 HDYICW 27
>sp|PG029_VACCC|IFN signaling evasion protein OPG029|Vaccinia virus (strain
Query: 2 HDYVFW 7
HDY+ W
Sbjct: 22 HDYICW 27
>sp|CEP1_HHV2H|CYTOPLASMIC envelopment protein 1|Human herpesvirus 2 (strain HG52)
Query: 1 SHDYVFWCGD 10
S DY CGD
Sbjct: 86 SEDYFKRCGD 95
>sp|PG029_MONPV|IFN signaling evasion protein OPG029|Monkeypox virus (MPXV)
Query: 2 HDYVFW 7
HDY+ W
Sbjct: 22 HDYICW 27
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 SHDYVFWCGD 10
S+D + CGD
Sbjct: 765 SYDSIIACGD 774
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 DYVFWCGD 10
+++ WC D
Sbjct: 6757 EFMLWCKD 6764
Query: 3 DYVFW 7
+Y+FW
Sbjct: 7002 NYIFW 7006
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 HDYVFW 7
H Y FW
Sbjct: 2143 HIYTFW 2148
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 3 DYVFW 7
DY FW
Sbjct: 442 DYSFW 446
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain
Query: 2 HDYVFWC 8
HD+ F C
Sbjct: 37 HDFCFVC 43
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 SHDYVFW 7
++DY+ W
Sbjct: 1732 TNDYIIW 1738
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 SHDYVFW 7
++DY+ W
Sbjct: 1732 TNDYIIW 1738
>sp|DUT_HHV7J|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 7 (strain JI)
Query: 3 DYVFWCGD 10
DY+F C D
Sbjct: 283 DYMFDCPD 290
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 5 VFWCG 9
V WCG
Sbjct: 1165 VVWCG 1169
>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)
Query: 1 SHDYVFW 7
+HDY W
Sbjct: 191 NHDYTIW 197
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 YVFWCGD 10
++ WC D
Sbjct: 6781 FMLWCKD 6787
Query: 3 DYVFW 7
+Y+FW
Sbjct: 7025 NYIFW 7029
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 YVFWCGD 10
++ WC D
Sbjct: 6758 FMLWCKD 6764
Query: 3 DYVFW 7
+Y+FW
Sbjct: 7002 NYIFW 7006
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 3 DYVFWCGD 10
D V W GD
Sbjct: 170 DRVLWIGD 177
>sp|NCAP_CVHN5|NUCLEOPROTEIN coronavirus HKU1 (isolate N5)
Query: 1 SHDYVFW 7
+H+ +FW
Sbjct: 140 AHEGIFW 146
>sp|NCAP_CVHN2|NUCLEOPROTEIN coronavirus HKU1 (isolate N2)
Query: 1 SHDYVFW 7
+H+ +FW
Sbjct: 140 AHEGIFW 146
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 HDYVF 6
HD+VF
Sbjct: 255 HDFVF 259
>sp|PG045_VACCA|APOPTOSIS regulator OPG045|Vaccinia virus (strain Ankara) (VACV)
Query: 2 HDYVF 6
HDYV+
Sbjct: 31 HDYVY 35
>sp|PG045_VACCC|APOPTOSIS regulator OPG045|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 HDYVF 6
HDYV+
Sbjct: 35 HDYVY 39
>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 HDYVFW 7
H YVF+
Sbjct: 144 HSYVFY 149
>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 HDYVFW 7
H YVF+
Sbjct: 144 HSYVFY 149
>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 HDYVFW 7
H YVF+
Sbjct: 144 HSYVFY 149
>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1
Query: 1 SHDYVFW 7
SHD W
Sbjct: 615 SHDQFLW 621
>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)
Query: 1 SHDYVFW 7
+H+Y W
Sbjct: 191 NHEYTIW 197
>sp|UL11P_HCMVA|PROTEIN UL11|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 DYVFW 7
DYV+W
Sbjct: 54 DYVYW 58
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 6 FWCGD 10
+WC D
Sbjct: 160 YWCPD 164
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 6 FWCGD 10
+WC D
Sbjct: 160 YWCPD 164
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 6 FWCGD 10
+WC D
Sbjct: 160 YWCPD 164
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 6 FWCGD 10
+WC D
Sbjct: 160 YWCPD 164
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 6 FWCGD 10
+WC D
Sbjct: 160 YWCPD 164
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 6 FWCGD 10
+WC D
Sbjct: 160 YWCPD 164
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 6 FWCGD 10
+WC D
Sbjct: 160 YWCPD 164
>sp|PG045_VACCP|APOPTOSIS regulator OPG045|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 HDYVF 6
HDYV+
Sbjct: 35 HDYVY 39
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 6 FWCGD 10
+WC D
Sbjct: 160 YWCPD 164
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 6 FWCGD 10
+WC D
Sbjct: 160 YWCPD 164
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 DYVFWCG 9
DY+ CG
Sbjct: 246 DYLLGCG 252
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 3 DYVFWCG 9
DY+ CG
Sbjct: 246 DYLLGCG 252
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 DYVFWCG 9
DY+ CG
Sbjct: 246 DYLLGCG 252
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 HDYVFWCGD 10
H +VF GD
Sbjct: 347 HSHVFSVGD 355
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 2 HDYVFWCGD 10
H +VF GD
Sbjct: 347 HSHVFSVGD 355
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 DYVFWCGD 10
++ WC D
Sbjct: 6778 QFMLWCND 6785
146|Sequence|726|735|FWCGDFNYRI
>sp|VU8_HHV7J|PROTEIN U8|Human herpesvirus 7 (strain JI)
Query: 2 WCGDFNY 8
+CGDF Y
Sbjct: 326 YCGDFGY 332
>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 WCGDFNYRI 10
WCGD I
Sbjct: 323 WCGDIKTTI 331
>sp|MAT_INCJJ|POLYPROTEIN p42|Influenza C virus (strain C/JJ/1950)
Query: 2 WCGDFNYRI 10
WCGD I
Sbjct: 323 WCGDIKTTI 331
>sp|MAT_INCHY|POLYPROTEIN p42|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 WCGDFNYRI 10
WCGD I
Sbjct: 323 WCGDIKTTI 331
>sp|MAT_INCCA|POLYPROTEIN p42|Influenza C virus (strain C/California/1978)
Query: 2 WCGDFNYRI 10
WCGD I
Sbjct: 323 WCGDIKTTI 331
>sp|MAT_INCAA|POLYPROTEIN p42|Influenza C virus (strain C/Ann
Query: 2 WCGDFNYRI 10
WCGD I
Sbjct: 323 WCGDIKTTI 331
>sp|MATRX_RABVH|MATRIX protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 WCGDFNYR 9
WC D N R
Sbjct: 169 WCIDMNSR 176
>sp|PG107_VACCC|PROTEIN H2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 WCGDFN 7
WC DF+
Sbjct: 181 WCSDFS 186
>sp|H2_VACCA|LATE protein H2|Vaccinia virus (strain Ankara) (VACV)
Query: 2 WCGDFN 7
WC DF+
Sbjct: 181 WCSDFS 186
>sp|PG082_VARV|TELOMERE-BINDING protein OPG082|Variola virus
Query: 2 WCGDFNYRI 10
W G + YRI
Sbjct: 335 WKGIYTYRI 343
>sp|PG082_VAR67|TELOMERE-BINDING protein OPG082|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 WCGDFNYRI 10
W G + YRI
Sbjct: 335 WKGIYTYRI 343
>sp|PG082_VACCC|TELOMERE-BINDING protein OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 WCGDFNYRI 10
W G + YRI
Sbjct: 335 WKGIYTYRI 343
>sp|PG082_MONPV|TELOMERE-BINDING protein OPG082|Monkeypox virus (MPXV)
Query: 2 WCGDFNYRI 10
W G + YRI
Sbjct: 335 WKGIYTYRI 343
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 1 FWCGDFNY 8
W GD NY
Sbjct: 398 LWEGDCNY 405
>sp|ICP27_HHV7J|MRNA export factor ICP27 homolog|Human herpesvirus 7 (strain JI)
Query: 4 GDFNYRI 10
GD YRI
Sbjct: 247 GDIEYRI 253
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 4 GDFNYRI 10
GD YRI
Sbjct: 269 GDITYRI 275
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 4 GDFNYRI 10
G FNY++
Sbjct: 1354 GKFNYKL 1360
>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain
Query: 1 FWCGDFN 7
W GDF+
Sbjct: 55 LWLGDFH 61
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 1 FWCGDFN 7
W GDF+
Sbjct: 55 LWLGDFH 61
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 1 FWCGDFN 7
F C DFN
Sbjct: 234 FGCMDFN 240
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 WCGDF 6
W GDF
Sbjct: 419 WTGDF 423
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 5 DFNYRI 10
DF+YR+
Sbjct: 553 DFSYRL 558
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 FWCGDFNYRI 10
+ C +++YRI
Sbjct: 675 YECSEWSYRI 684
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 2 WCGDFN 7
W G FN
Sbjct: 729 WTGTFN 734
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 2 WCGDFNY 8
W G FN+
Sbjct: 736 WTGMFNW 742
>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)
Query: 3 CGDF 6
CGDF
Sbjct: 134 CGDF 137
>sp|NSS_RVFVZ|NON-STRUCTURAL protein S|Rift valley fever virus (strain
Query: 4 GDFNYRI 10
G+F YR+
Sbjct: 63 GEFPYRV 69
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 6 FNYRI 10
FNYRI
Sbjct: 420 FNYRI 424
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 GDFNYRI 10
G FNY++
Sbjct: 6745 GSFNYKV 6751
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 CGDFNY 8
CG NY
Sbjct: 1182 CGSVNY 1187
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 CGDFNY 8
CG NY
Sbjct: 1182 CGSVNY 1187
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 CGDFNY 8
CG NY
Sbjct: 1182 CGSVNY 1187
147|Sequence|731|740|FNYRIDLPNE
>sp|ORF3_MERS1|NON-STRUCTURAL protein ORF3|Middle East respiratory syndrome-related coronavirus
Query: 2 NYRIDLPN 9
N+RID+P+
Sbjct: 57 NFRIDVPS 64
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 FNYRID 6
FNYRID
Sbjct: 420 FNYRID 425
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 YRIDLPNE 10
YR+ LPN+
Sbjct: 435 YRVHLPND 442
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 YRIDLPNE 10
YR+ LPN+
Sbjct: 435 YRVHLPND 442
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 YRIDLPNE 10
YR+ LPN+
Sbjct: 435 YRVHLPND 442
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 YRIDLPN 9
Y +DLPN
Sbjct: 1879 YGLDLPN 1885
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 FNYRIDLPN 9
F YR +LP+
Sbjct: 2545 FTYRHNLPD 2553
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 FNYRIDLPN 9
F YR +LP+
Sbjct: 2523 FTYRHNLPD 2531
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 FNYRIDLPN 9
F YR +LP+
Sbjct: 2518 FTYRHNLPD 2526
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 FNYRIDLPNE 10
F Y+ID NE
Sbjct: 690 FAYKIDTLNE 699
>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 FNYRIDLPNE 10
F Y+ID NE
Sbjct: 690 FAYKIDTLNE 699
>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 1 FNYRIDLPNE 10
F Y+ID NE
Sbjct: 690 FAYKIDTLNE 699
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 FNYRIDLPNE 10
F Y+ID NE
Sbjct: 690 FAYKIDTLNE 699
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 FNYRIDLPNE 10
F Y+ID NE
Sbjct: 690 FAYKIDTLNE 699
>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 NYRIDLPN 9
N+R++LP+
Sbjct: 504 NFRMELPS 511
>sp|DUT_HHV7J|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 7 (strain JI)
Query: 1 FNYRIDLPNE 10
F+Y D P+E
Sbjct: 282 FDYMFDCPDE 291
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 FNYRIDLPNE 10
F Y++D NE
Sbjct: 690 FAYKVDTLNE 699
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 FNYRIDLPNE 10
F Y++D NE
Sbjct: 690 FAYKVDTLNE 699
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 FNYRIDLPNE 10
F Y++D NE
Sbjct: 690 FAYKVDTLNE 699
>sp|VP7_ROTWI|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 2 NYRIDLP 8
NY I+LP
Sbjct: 52 NYGINLP 58
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 FNYRIDL 7
FN +IDL
Sbjct: 1741 FNMKIDL 1747
>sp|VP7_ROT41|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 2 NYRIDLP 8
NY I+LP
Sbjct: 52 NYGINLP 58
>sp|VP7_ROTHO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 NYRIDLP 8
NY I+LP
Sbjct: 52 NYGINLP 58
>sp|VP7_ROTAM|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 2 NYRIDLP 8
NY I+LP
Sbjct: 52 NYGINLP 58
>sp|NEF_HV2KR|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 FNYRIDLPNE 10
F Y+ LP E
Sbjct: 230 FGYKSGLPEE 239
>sp|VP7_ROTHQ|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 2 NYRIDLP 8
NY I+LP
Sbjct: 52 NYGINLP 58
>sp|VP7_ROTHL|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 NYRIDLP 8
NY I+LP
Sbjct: 52 NYGINLP 58
>sp|VP7_ROTHV|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 2 NYRIDLP 8
NY I+LP
Sbjct: 52 NYGINLP 58
>sp|VP7_ROTHP|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 2 NYRIDLP 8
NY I+LP
Sbjct: 52 NYGINLP 58
>sp|VP7_ROTH3|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 NYRIDLP 8
NY I+LP
Sbjct: 52 NYGINLP 58
>sp|VP7_ROTHT|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 2 NYRIDLP 8
NY I+LP
Sbjct: 52 NYGINLP 58
148|Sequence|736|745|DLPNEEVKEL
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 1 DLPNEEV 7
DLP EE+
Sbjct: 281 DLPGEEI 287
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 1 DLPNEEV 7
DLP EE+
Sbjct: 281 DLPGEEI 287
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 1 DLPNEEV 7
DLP EE+
Sbjct: 281 DLPGEEI 287
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 DLPNEEVK 8
++P EEVK
Sbjct: 1205 EIPKEEVK 1212
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 DLPNEEVK 8
++P EEVK
Sbjct: 1205 EIPKEEVK 1212
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 1 DLPNEEV 7
DLP EE+
Sbjct: 281 DLPAEEI 287
>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)
Query: 2 LPNEEVKE 9
+PN +VKE
Sbjct: 103 IPNHDVKE 110
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 LPNEEVKEL 10
LP+ EVK L
Sbjct: 742 LPSGEVKTL 750
>sp|E1A_ADE04|EARLY E1A protein|Human adenovirus E serotype 4
Query: 1 DLPNEEV 7
DLP+EE+
Sbjct: 6 DLPDEEI 12
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 4 NEEVKE 9
NEE+KE
Sbjct: 484 NEELKE 489
>sp|PG145_VARV|TRANSCRIPT termination protein OPG145|Variola virus
Query: 2 LPNEEVKEL 10
PN VKE+
Sbjct: 428 FPNTSVKEI 436
>sp|PG145_VAR67|TRANSCRIPT termination protein OPG145|Variola virus (isolate
Query: 2 LPNEEVKEL 10
PN VKE+
Sbjct: 428 FPNTSVKEI 436
149|Sequence|741|750|EVKELIRQQN
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 2 VKELIRQQ 9
V+EL+R+Q
Sbjct: 446 VRELVREQ 453
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 2 VKELIRQQ 9
+ ELIRQ+
Sbjct: 87 ITELIRQE 94
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 EVKELIRQQN 10
E + L+R+QN
Sbjct: 2110 EAQRLVREQN 2119
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 1 EVKELIRQQN 10
E+KEL++ N
Sbjct: 186 ELKELLQASN 195
>sp|NEF_HV2NZ|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 KELIRQQN 10
KEL +QQN
Sbjct: 79 KELYKQQN 86
150|Sequence|746|755|IRQQNWDSLI
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 IRQQNWDSLI 10
IRQ +++SLI
Sbjct: 436 IRQPDFNSLI 445
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 IRQQNWDSL 9
+R +WD+L
Sbjct: 1197 LRPADWDAL 1205
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 RQQNWDSLI 10
+Q+NW++ I
Sbjct: 433 KQENWNTDI 441
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 RQQNWDSLI 10
+Q+NW++ I
Sbjct: 433 KQENWNTDI 441
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 2 RQQNWDSLI 10
+Q+NW++ I
Sbjct: 433 KQENWNADI 441
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 RQQNWDSLI 10
+Q+NW++ I
Sbjct: 433 KQENWNTDI 441
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 RQQNWDSLI 10
+Q+NW++ I
Sbjct: 433 KQENWNTDI 441
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 RQQNWDSLI 10
+Q+NW++ I
Sbjct: 433 KQENWNTDI 441
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 RQQNWDSLI 10
+Q+NW++ I
Sbjct: 433 KQENWNTDI 441
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 RQQNWDSLI 10
+Q+NW++ I
Sbjct: 433 KQENWNTDI 441
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 QQNWDSL 9
Q+ WDS+
Sbjct: 473 QREWDSV 479
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 QQNWDSL 9
Q+ WDS+
Sbjct: 473 QREWDSV 479
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 QQNWDSL 9
Q+ WDS+
Sbjct: 473 QREWDSV 479
151|Sequence|751|760|WDSLIAGDQL
>sp|FUS_PI2HT|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 5 IAGDQL 10
IAGDQL
Sbjct: 24 IAGDQL 29
>sp|FUS_PI2HG|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 5 IAGDQL 10
IAGDQL
Sbjct: 24 IAGDQL 29
>sp|FUS_PI2H|FUSION glycoprotein F0|Human parainfluenza 2 virus (HPIV-2)
Query: 5 IAGDQL 10
IAGDQL
Sbjct: 24 IAGDQL 29
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DSLIAGDQL 10
DS++AG QL
Sbjct: 543 DSIVAGIQL 551
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 1 WDSLIAGDQ 9
W++L GD+
Sbjct: 362 WEALAGGDR 370
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 1 WDSLIAGDQ 9
W++L GD+
Sbjct: 365 WEALAGGDR 373
>sp|V30K_HCMVE|30 kDa major early protein|Human cytomegalovirus (strain Eisenhardt)
Query: 1 WDSLIAGDQ 9
W +L++GD
Sbjct: 48 WVALVSGDH 56
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 1 WDSLIAG 7
W+ +IAG
Sbjct: 376 WEGMIAG 382
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 1 WDSLIAG 7
W+ +IAG
Sbjct: 369 WEGMIAG 375
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 1 WDSLIAG 7
W+ +IAG
Sbjct: 367 WEGMIAG 373
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 1 WDSLIAG 7
W+ +IAG
Sbjct: 374 WEGMIAG 380
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 1 WDSLIAG 7
W+ +IAG
Sbjct: 374 WEGMIAG 380
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 1 WDSLIAG 7
W+ +IAG
Sbjct: 369 WEGMIAG 375
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 1 WDSLIAG 7
W+ +IAG
Sbjct: 365 WEGMIAG 371
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 1 WDSLIAG 7
W+ +IAG
Sbjct: 375 WEGMIAG 381
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 WDSLIAG 7
W+ +IAG
Sbjct: 366 WEGMIAG 372
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 1 WDSLIAG 7
W+ +IAG
Sbjct: 374 WEGMIAG 380
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 1 WDSLIAG 7
W+ +IAG
Sbjct: 376 WEGMIAG 382
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 WDSLIAG 7
W S IAG
Sbjct: 312 WSSYIAG 318
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 2 DSLIAGDQL 10
++LIAGD +
Sbjct: 542 NTLIAGDMV 550
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 WDSLIAGD 8
W+ + GD
Sbjct: 1703 WNKFVTGD 1710
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 WDSLIAGD 8
W+ + GD
Sbjct: 1703 WNKFVTGD 1710
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 2 DSLIAGD 8
DS+I GD
Sbjct: 1019 DSIIKGD 1025
>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 WDSLIAGDQL 10
W+ + GD+L
Sbjct: 387 WNGNVYGDKL 396
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DSLIAGDQL 10
DS++AG +L
Sbjct: 542 DSIVAGIEL 550
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DSLIAGDQL 10
DS++AG +L
Sbjct: 540 DSIVAGIEL 548
>sp|UL26_HCMVM|TEGUMENT protein UL26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 WDSLIAG 7
WD +AG
Sbjct: 111 WDRSVAG 117
>sp|UL26_HCMVA|TEGUMENT protein UL26|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 WDSLIAG 7
WD +AG
Sbjct: 111 WDRSVAG 117
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DSLIAGDQL 10
DS++AG +L
Sbjct: 543 DSIVAGIEL 551
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DSLIAGDQL 10
DS++AG +L
Sbjct: 541 DSIVAGIEL 549
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DSLIAGDQL 10
DS++AG +L
Sbjct: 542 DSIVAGIEL 550
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DSLIAGDQL 10
DS++AG +L
Sbjct: 542 DSIVAGVEL 550
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DSLIAGDQL 10
DS++AG +L
Sbjct: 542 DSIVAGIEL 550
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DSLIAGDQL 10
DS++AG +L
Sbjct: 542 DSIVAGIEL 550
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 DSLIAGDQL 10
+SL+ G QL
Sbjct: 2156 NSLVVGSQL 2164
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DSLIAGDQL 10
DS++AG +L
Sbjct: 542 DSIVAGIEL 550
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DSLIAGDQL 10
DS++AG +L
Sbjct: 541 DSIVAGIEL 549
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DSLIAGDQL 10
DS++AG +L
Sbjct: 540 DSIVAGIEL 548
152|Sequence|756|765|AGDQLINQKN
>sp|FUS_PI2HT|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 1 AGDQLIN 7
AGDQL+N
Sbjct: 25 AGDQLLN 31
>sp|FUS_PI2HG|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 1 AGDQLIN 7
AGDQL+N
Sbjct: 25 AGDQLLN 31
>sp|FUS_PI2H|FUSION glycoprotein F0|Human parainfluenza 2 virus (HPIV-2)
Query: 1 AGDQLIN 7
AGDQL+N
Sbjct: 25 AGDQLLN 31
>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P
Query: 3 DQLINQK 9
D+LIN+K
Sbjct: 234 DELINKK 240
153|Sequence|761|770|INQKNAGQVF
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 5 NAGQVF 10
NAG+VF
Sbjct: 1137 NAGEVF 1142
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 5 NAGQVF 10
NAG+VF
Sbjct: 1137 NAGEVF 1142
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 5 NAGQVF 10
NAG+VF
Sbjct: 1137 NAGEVF 1142
>sp|U79_HHV7J|PROTEIN U79|Human herpesvirus 7 (strain JI)
Query: 1 INQKNAGQ 8
I+QKN G+
Sbjct: 100 ISQKNEGK 107
>sp|KRB2_VACCC|PSEUDOKINASE OPG198|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 KNAGQVF 10
KN G+VF
Sbjct: 102 KNLGRVF 108
>sp|KRB2_VACCA|PSEUDOKINASE OPG198|Vaccinia virus (strain Ankara) (VACV)
Query: 4 KNAGQVF 10
KN G+VF
Sbjct: 102 KNLGRVF 108
154|Sequence|766|775|AGQVFRGFLE
>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain
Query: 3 QVFRGF 8
QVFRGF
Sbjct: 137 QVFRGF 142
>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain
Query: 3 QVFRGF 8
QVFRGF
Sbjct: 137 QVFRGF 142
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 AGQVFRGFLE 10
+GQ+ R F +
Sbjct: 84 SGQILRSFFK 93
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 AGQVFRGFLE 10
+GQ+ R F +
Sbjct: 84 SGQILRSFFK 93
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 1 AGQVFRGFLE 10
+GQ+ R F +
Sbjct: 84 SGQILRSFFK 93
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 AGQVFRGFL 9
+GQ+ GFL
Sbjct: 737 SGQLVNGFL 745
155|Sequence|771|780|RGFLEGKVTF
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 GFLEGKVT 9
GF+ GKVT
Sbjct: 309 GFVVGKVT 316
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 RGFLEG 6
RGFL+G
Sbjct: 1398 RGFLQG 1403
>sp|VE7_HPV04|PROTEIN E7|Human papillomavirus 4
Query: 3 FLEGKVTF 10
+EGK+TF
Sbjct: 79 LVEGKLTF 86
>sp|KRB2_VACCA|PSEUDOKINASE OPG198|Vaccinia virus (strain Ankara) (VACV)
Query: 1 RGFLEGKV 8
RGF GK+
Sbjct: 133 RGFTHGKI 140
>sp|KRB2_VACCC|PSEUDOKINASE OPG198|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RGFLEGKV 8
RGF GK+
Sbjct: 133 RGFTHGKI 140
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 RGFLEG 6
RGFL+G
Sbjct: 1398 RGFLKG 1403
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 RGFLEG 6
RGFL+G
Sbjct: 1398 RGFLKG 1403
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 RGFLEG 6
RGFL+G
Sbjct: 1398 RGFLKG 1403
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 RGFLEG 6
RGFL+G
Sbjct: 1398 RGFLKG 1403
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 RGFLEG 6
RGFL+G
Sbjct: 1398 RGFLKG 1403
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GFLEGKVTF 10
FL+GK F
Sbjct: 442 AFLQGKAEF 450
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 2 GFLEGKVT 9
G++EGK++
Sbjct: 240 GYIEGKLS 247
>sp|GPX_MCV1|GLUTATHIONE peroxidase|Molluscum contagiosum virus subtype 1
Query: 2 GFLEGKV 8
GFL G+V
Sbjct: 48 GFLRGRV 54
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 2 GFLEG 6
GFLEG
Sbjct: 370 GFLEG 374
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 2 GFLEG 6
GFLEG
Sbjct: 363 GFLEG 367
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 2 GFLEG 6
GFLEG
Sbjct: 361 GFLEG 365
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 2 GFLEG 6
GFLEG
Sbjct: 368 GFLEG 372
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 2 GFLEG 6
GFLEG
Sbjct: 368 GFLEG 372
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 2 GFLEG 6
GFLEG
Sbjct: 363 GFLEG 367
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 2 GFLEG 6
GFLEG
Sbjct: 359 GFLEG 363
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 2 GFLEG 6
GFLEG
Sbjct: 369 GFLEG 373
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 2 GFLEG 6
GFLEG
Sbjct: 360 GFLEG 364
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 2 GFLEG 6
GFLEG
Sbjct: 368 GFLEG 372
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 2 GFLEG 6
GFLEG
Sbjct: 360 GFLEG 364
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 2 GFLEG 6
GFLEG
Sbjct: 370 GFLEG 374
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 GFLEGKVT 9
GFL KVT
Sbjct: 309 GFLSCKVT 316
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 GFLEGKVT 9
GFL KVT
Sbjct: 309 GFLSCKVT 316
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 GFLEGKVT 9
GFL KVT
Sbjct: 309 GFLSCKVT 316
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 GFLEGKVT 9
GFL KVT
Sbjct: 309 GFLSCKVT 316
156|Sequence|776|785|GKVTFAPTYK
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 657 TFSPTYK 663
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 657 TFSPTYK 663
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 657 TFSPTYK 663
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 668 TFSPTYK 674
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 670 TFSPTYK 676
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 668 TFSPTYK 674
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 667 TFSPTYK 673
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 657 TFSPTYK 663
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 668 TFSPTYK 674
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 668 TFSPTYK 674
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 668 TFSPTYK 674
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 670 TFSPTYK 676
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 670 TFSPTYK 676
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 663 TFSPTYK 669
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 663 TFSPTYK 669
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 668 TFSPTYK 674
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 667 TFSPTYK 673
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 667 TFSPTYK 673
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 668 TFSPTYK 674
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 670 TFSPTYK 676
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 667 TFSPTYK 673
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 657 TFSPTYK 663
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 668 TFSPTYK 674
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 668 TFSPTYK 674
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 668 TFSPTYK 674
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 670 TFSPTYK 676
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 668 TFSPTYK 674
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 657 TFSPTYK 663
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 663 TFSPTYK 669
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 668 TFSPTYK 674
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 657 TFSPTYK 663
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 668 TFSPTYK 674
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 668 TFSPTYK 674
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 668 TFSPTYK 674
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 668 TFSPTYK 674
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 670 TFSPTYK 676
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 667 TFSPTYK 673
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 GKVTFAPTYK 10
GKVTF Y+
Sbjct: 1545 GKVTFTEAYR 1554
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 GKVTFAPTYK 10
GKVTF Y+
Sbjct: 1545 GKVTFTEAYR 1554
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 4 TFAPTYK 10
TF+PTYK
Sbjct: 667 TFSPTYK 673
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 1 GKVTFAP 7
G+V FAP
Sbjct: 419 GRVVFAP 425
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 GKVTFAP 7
G+V FAP
Sbjct: 419 GRVVFAP 425
>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GKVTFAP 7
G+V FAP
Sbjct: 419 GRVVFAP 425
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 1 GKVTFAP 7
G+V FAP
Sbjct: 419 GRVVFAP 425
>sp|TRX2_HHV2H|TRIPLEX capsid protein 2|Human herpesvirus 2 (strain HG52)
Query: 1 GKVTFAPTYK 10
G+V F PT +
Sbjct: 29 GRVVFLPTIR 38
>sp|TRX2_HHV11|TRIPLEX capsid protein 2|Human herpesvirus 1 (strain 17)
Query: 1 GKVTFAPTYK 10
G+V F PT +
Sbjct: 29 GRVVFLPTIR 38
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 1 GKVTFAPTYK 10
G++TF P +
Sbjct: 133 GRITFGPVER 142
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 1 GKVTFAPTYK 10
G++TF P +
Sbjct: 133 GRITFGPVER 142
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 GKVTFAPTYK 10
G++TF P +
Sbjct: 133 GRITFGPVER 142
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 GKVTFAPTYK 10
G++TF P +
Sbjct: 133 GRITFGPVER 142
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 5 FAPTYK 10
F+PTYK
Sbjct: 669 FSPTYK 674
>sp|VE7_HPV30|PROTEIN E7|Human papillomavirus 30
Query: 1 GKVTFAPTY 9
GKVT P Y
Sbjct: 3 GKVTTIPEY 11
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 5 FAPTYK 10
F+PTYK
Sbjct: 669 FSPTYK 674
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 5 FAPTYK 10
F+PTYK
Sbjct: 669 FSPTYK 674
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 5 FAPTYK 10
F+PTYK
Sbjct: 669 FSPTYK 674
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 5 FAPTYK 10
F+PTYK
Sbjct: 669 FSPTYK 674
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 5 FAPTYK 10
F+PTYK
Sbjct: 669 FSPTYK 674
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 5 FAPTYK 10
F+PTYK
Sbjct: 669 FSPTYK 674
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 5 FAPTYK 10
F+PTYK
Sbjct: 669 FSPTYK 674
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 5 FAPTYK 10
F+PTYK
Sbjct: 669 FSPTYK 674
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 VTFAPT 8
V+FAPT
Sbjct: 430 VSFAPT 435
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 GKVTFAPTY 9
GKV + P Y
Sbjct: 2133 GKVLYTPPY 2141
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 4 TFAPTY 9
TF PTY
Sbjct: 58 TFPPTY 63
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GKVTFAPTYK 10
GK +AP K
Sbjct: 425 GKAMYAPPIK 434
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GKVTFAPTYK 10
GK +AP K
Sbjct: 423 GKAMYAPPIK 432
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 VTFAPT 8
VTF PT
Sbjct: 439 VTFVPT 444
>sp|NSP1B_ROTGI|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate RVB/Rat/United
Query: 1 GKVTFAPTY 9
GKV P Y
Sbjct: 12 GKVDLVPIY 20
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 3 VTFAPTYK 10
+TF TYK
Sbjct: 531 ITFTGTYK 538
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 1 GKVTFAPTYK 10
+V F P YK
Sbjct: 619 AQVQFIPEYK 628
157|Sequence|781|790|APTYKYDLFS
>sp|SPIK2_ADE41|FIBER protein 2|Human adenovirus F serotype 41
Query: 2 PTYKYDLFS 10
P Y YD FS
Sbjct: 12 PVYPYDTFS 20
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 PTYKYDLFS 10
PT+ YD+ +
Sbjct: 200 PTHTYDIMT 208
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 APTYKYDLF 9
AP YK+ L+
Sbjct: 2075 APNYKFALW 2083
>sp|NS12_CVHN5|NON-STRUCTURAL protein 4|Human coronavirus HKU1 (isolate N5)
Query: 2 PTYKYDLFS 10
P+YKY L +
Sbjct: 6 PSYKYSLIT 14
>sp|NS12_CVHN2|NON-STRUCTURAL protein 4|Human coronavirus HKU1 (isolate N2)
Query: 2 PTYKYDLFS 10
P+YKY L +
Sbjct: 6 PSYKYSLIT 14
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 APTYKYDLF 9
AP YK+ L+
Sbjct: 2076 APNYKFALW 2084
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 APTYKYDLF 9
AP YK+ L+
Sbjct: 2075 APNYKFALW 2083
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 APTYKYDLF 9
AP YK+ L+
Sbjct: 2076 APNYKFALW 2084
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 TYKYDLFS 10
TYK DL++
Sbjct: 1905 TYKRDLYT 1912
>sp|K42_HHV8P|PROTEIN K4.2|Human herpesvirus 8 type P
Query: 6 YDLFS 10
YDLFS
Sbjct: 30 YDLFS 34
158|Sequence|786|795|YDLFSDDYDT
>sp|VL2_HPV58|MINOR capsid protein L2|Human papillomavirus 58
Query: 1 YDLFSDDYDT 10
YD+++DD DT
Sbjct: 363 YDIYADDADT 372
>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate
Query: 1 YDLFSDD 7
Y+LF+DD
Sbjct: 360 YELFADD 366
>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain
Query: 1 YDLFSDD 7
Y+LF+DD
Sbjct: 360 YELFADD 366
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 3 LFSDDYDT 10
+F+DD+DT
Sbjct: 1215 IFNDDHDT 1222
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 2 DLFSDDY 8
DLFS+DY
Sbjct: 9 DLFSEDY 15
>sp|VL2_HPV62|MINOR capsid protein L2|Human papillomavirus 62
Query: 1 YDLFSDD 7
YD+++DD
Sbjct: 355 YDVYADD 361
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 SDDYD 9
SDDYD
Sbjct: 549 SDDYD 553
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 SDDYD 9
SDDYD
Sbjct: 549 SDDYD 553
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 SDDYD 9
SDDYD
Sbjct: 549 SDDYD 553
>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 YDLFSDD 7
YDL SD+
Sbjct: 92 YDLLSDE 98
>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 YDLFSDD 7
YDL SD+
Sbjct: 92 YDLLSDE 98
>sp|PG053_VARV|EFC-ASSOCIATED protein OPG053|Variola virus
Query: 1 YDLFSDDY 8
Y+LF D Y
Sbjct: 11 YNLFIDSY 18
>sp|PG053_VAR67|EFC-ASSOCIATED protein OPG053|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 YDLFSDDY 8
Y+LF D Y
Sbjct: 11 YNLFIDSY 18
>sp|PG053_VACCP|EFC-ASSOCIATED protein OPG053|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 YDLFSDDY 8
Y+LF D Y
Sbjct: 11 YNLFIDSY 18
>sp|PG053_VACCC|EFC-ASSOCIATED protein OPG053|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YDLFSDDY 8
Y+LF D Y
Sbjct: 11 YNLFIDSY 18
>sp|PG053_MONPV|EFC-ASSOCIATED protein OPG053|Monkeypox virus (MPXV)
Query: 1 YDLFSDDY 8
Y+LF D Y
Sbjct: 11 YNLFIDSY 18
>sp|VL2_HPV16|MINOR capsid protein L2|Human papillomavirus type 16
Query: 1 YDLFSDDYDT 10
YD+++DD+ T
Sbjct: 366 YDIYADDFIT 375
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 DLFSDDY 8
DL+ DD+
Sbjct: 613 DLYQDDF 619
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 DLFSDDY 8
DL+ DD+
Sbjct: 613 DLYQDDF 619
>sp|VL2_HPV33|MINOR capsid protein L2|Human papillomavirus 33
Query: 1 YDLFSDDYD 9
YD+++DD D
Sbjct: 363 YDVYADDVD 371
>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 YDLFSDDYD 9
YDLF YD
Sbjct: 188 YDLFLTCYD 196
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 YDLFSDDYD 9
+D+ ++D+D
Sbjct: 2248 FDMSAEDFD 2256
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 YDLFSDDYD 9
+D+ ++D+D
Sbjct: 2250 FDMSAEDFD 2258
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 YDLFSDDYD 9
+D+ ++D+D
Sbjct: 2202 FDMSAEDFD 2210
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 YDLFSDDYD 9
+D+ ++D+D
Sbjct: 2215 FDMSAEDFD 2223
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 YDLFSDDYD 9
+D+ ++D+D
Sbjct: 2202 FDMSAEDFD 2210
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 YDLFSDDYD 9
+D+ ++D+D
Sbjct: 2231 FDMSAEDFD 2239
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 YDLFSDDYD 9
+D+ ++D+D
Sbjct: 2231 FDMSAEDFD 2239
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 YDLFSDDYD 9
+D+ ++D+D
Sbjct: 2223 FDMSAEDFD 2231
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 YDLFSDDYD 9
+D+ ++D+D
Sbjct: 2232 FDMSAEDFD 2240
>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 2 DLFSDDYD 9
D+F+ YD
Sbjct: 385 DIFNSKYD 392
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 YDLFSDDYD 9
+D+ ++D+D
Sbjct: 2237 FDMSAEDFD 2245
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 YDLFSDDYD 9
+D+ ++D+D
Sbjct: 2146 FDMSAEDFD 2154
>sp|FUS_HRSVB|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 2 DLFSDDYD 9
D+F+ YD
Sbjct: 385 DIFNSKYD 392
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 YDLFSDDYD 9
+D+ ++D+D
Sbjct: 884 FDMSAEDFD 892
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 YDLFSDDYD 9
+D+ ++D+D
Sbjct: 2248 FDMSAEDFD 2256
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 YDLFSDDYD 9
+D+ ++D+D
Sbjct: 2248 FDMSAEDFD 2256
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 YDLFSDDYD 9
+D+ ++D+D
Sbjct: 2249 FDMSAEDFD 2257
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 YDLFSDDYD 9
+D+ ++D+D
Sbjct: 2212 FDMSAEDFD 2220
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 YDLFSDDYD 9
+D+ ++D+D
Sbjct: 2209 FDMSAEDFD 2217
>sp|VL2_HPV28|MINOR capsid protein L2|Human papillomavirus 28
Query: 1 YDLFSDDYD 9
YD+F+D D
Sbjct: 354 YDVFADVED 362
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 YDLFSDDYD 9
+D+ ++D+D
Sbjct: 2209 FDMSAEDFD 2217
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 3 LFSDDYDT 10
LFS DY T
Sbjct: 376 LFSPDYLT 383
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 YDLFSDDYD 9
+D+ ++D+D
Sbjct: 2164 FDMSAEDFD 2172
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 YDLFSDDYD 9
+D+ ++D+D
Sbjct: 2172 FDMSAEDFD 2180
>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 YDLFSDDY 8
+DL +DY
Sbjct: 613 WDLMDEDY 620
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 YDLFSDDYD 9
+D+ ++D+D
Sbjct: 2209 FDMSAEDFD 2217
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 YDLFSDDYD 9
+D+ ++D+D
Sbjct: 2205 FDMSAEDFD 2213
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 DLFSDDY 8
D FSD Y
Sbjct: 31 DAFSDSY 37
159|Sequence|791|800|DDYDTSEKCR
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 2 DYDTSEKC 9
DYDT KC
Sbjct: 1109 DYDTMVKC 1116
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 2 DYDTSEKC 9
DYDT KC
Sbjct: 1109 DYDTMVKC 1116
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|GAG_HV1W2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|GAG_HV1N5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|GAG_HV1J3|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|GAG_HV193|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 DDYDTSEKCR 10
+D+D +KC+
Sbjct: 1459 EDFDIIQKCQ 1468
>sp|ORF11_HHV8P|PROTEIN ORF11|Human herpesvirus 8 type P
Query: 4 DTSEKCR 10
+T+E+CR
Sbjct: 211 ETTEECR 217
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 DDYDTSEKCR 10
+D+D +KC+
Sbjct: 1479 EDFDIIQKCQ 1488
>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DTSEKCR 10
+TSE CR
Sbjct: 52 ETSEGCR 58
>sp|SPIKE_ADE08|FIBER protein|Human adenovirus D serotype 8
Query: 4 DTSEKCR 10
DTS CR
Sbjct: 187 DTSPNCR 193
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 DDYDTSEKCR 10
+D+D +KC+
Sbjct: 1509 EDFDIIQKCQ 1518
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 DDYDTSEKCR 10
+D+D +KC+
Sbjct: 1459 EDFDIIQKCQ 1468
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 DTSEKC 9
DTSE C
Sbjct: 841 DTSEPC 846
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 DTSEKC 9
DTSE C
Sbjct: 850 DTSEPC 855
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 DDYDTSEKCR 10
+D+D +KC+
Sbjct: 1479 EDFDIIQKCQ 1488
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 DDYDTSEKCR 10
+D+D +KC+
Sbjct: 1509 EDFDIIQKCQ 1518
>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 3 YDTSEKCR 10
YD S +CR
Sbjct: 281 YDISPRCR 288
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 1 DDYDTSEK 8
D+Y ++EK
Sbjct: 486 DEYSSTEK 493
>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 DDYDTSEK 8
D+Y ++EK
Sbjct: 486 DEYSSTEK 493
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 DYDTSEK 8
D+DT+EK
Sbjct: 233 DWDTTEK 239
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 DDYDTSEKC 9
D YDT C
Sbjct: 310 DQYDTKVGC 318
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 DDYDTSEK 8
D+Y ++EK
Sbjct: 486 DEYSSAEK 493
>sp|PB2S1_I33A0|PB2-S1 A virus (strain A/Wilson-Smith/1933
Query: 1 DDYDTSEK 8
D+Y ++EK
Sbjct: 486 DEYSSAEK 493
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 YDTSEKC 9
+DT+E C
Sbjct: 1512 FDTAELC 1518
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 DDYDTSEKCR 10
+D+D KC+
Sbjct: 1422 EDFDLISKCQ 1431
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 DDYDTSEKC 9
D TS+KC
Sbjct: 2590 DGVTTSDKC 2598
160|Sequence|796|805|SEKCRTPAWT
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 EKCRTPAWT 10
++C+ P WT
Sbjct: 977 KQCKGPVWT 985
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 EKCRTPAWT 10
++C+ P WT
Sbjct: 977 KQCKGPVWT 985
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 3 KCRTPAW 9
KCR AW
Sbjct: 396 KCRVAAW 402
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 3 KCRTPAW 9
KCR AW
Sbjct: 396 KCRVAAW 402
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 3 KCRTPAW 9
KCR AW
Sbjct: 396 KCRVAAW 402
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 3 KCRTPAW 9
KCR AW
Sbjct: 396 KCRVAAW 402
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 3 KCRTPAW 9
KCR AW
Sbjct: 396 KCRVAAW 402
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 3 KCRTPAW 9
K R PAW
Sbjct: 802 KLRVPAW 808
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 3 KCRTPAW 9
K R PAW
Sbjct: 818 KLRAPAW 824
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 KCRTPA 8
KCRTP
Sbjct: 2069 KCRTPG 2074
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 4 CRTPAWT 10
C T AWT
Sbjct: 1621 CITQAWT 1627
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 4 CRTPAWT 10
C T AWT
Sbjct: 1621 CITQAWT 1627
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 1 SEKCRTPAWT 10
S++C T WT
Sbjct: 215 SQRCVTTPWT 224
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 3 KCRTP 7
KC+TP
Sbjct: 1410 KCKTP 1414
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 3 KCRTP 7
KC+TP
Sbjct: 1408 KCKTP 1412
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 3 KCRTP 7
KC+TP
Sbjct: 1407 KCKTP 1411
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 3 KCRTP 7
KC+TP
Sbjct: 1398 KCKTP 1402
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 RTPAW 9
R PAW
Sbjct: 5803 RNPAW 5807
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 RTPAW 9
R PAW
Sbjct: 5826 RNPAW 5830
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 5 RTPAWT 10
R P+WT
Sbjct: 334 RRPSWT 339
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 5 RTPAWT 10
R P+WT
Sbjct: 334 RRPSWT 339
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 5 RTPAW 9
R+PAW
Sbjct: 1234 RSPAW 1238
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 5 RTPAW 9
R+PAW
Sbjct: 1234 RSPAW 1238
>sp|PAP_HHV8P|DNA polymerase processivity factor|Human herpesvirus 8 type P
Query: 4 CRTPAW 9
C+ P W
Sbjct: 259 CKVPGW 264
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 3 KCRTPA 8
KCR+P
Sbjct: 2069 KCRSPG 2074
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 3 KCRTPA 8
KCR+P
Sbjct: 2069 KCRSPG 2074
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 3 KCRTPA 8
KCR+P
Sbjct: 2069 KCRSPG 2074
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 4 CRTPAW 9
CR P W
Sbjct: 501 CRKPKW 506
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 3 KCRTP 7
KC+TP
Sbjct: 293 KCQTP 297
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 3 KCRTP 7
KC+TP
Sbjct: 289 KCQTP 293
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 KCRTP 7
KC+TP
Sbjct: 293 KCQTP 297
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 3 KCRTP 7
KC+TP
Sbjct: 293 KCQTP 297
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 3 KCRTP 7
KC+TP
Sbjct: 293 KCQTP 297
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 3 KCRTP 7
KC+TP
Sbjct: 291 KCQTP 295
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 3 KCRTP 7
KC+TP
Sbjct: 293 KCQTP 297
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 KCRTP 7
KC+TP
Sbjct: 293 KCQTP 297
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 SEKCRTPA 8
S++C TP
Sbjct: 432 SDRCLTPG 439
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 SEKCRTPA 8
S++C TP
Sbjct: 432 SDRCLTPG 439
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 2 EKCRTPAW 9
E+C P W
Sbjct: 1495 EECGMPQW 1502
161|Sequence|801|810|TPAWTDRVLW
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 1 TPAWTDRV 8
TP W DR+
Sbjct: 329 TPEWIDRL 336
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 1 TPAWTDRV 8
TP W DR+
Sbjct: 329 TPEWIDRL 336
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 5 TDRVLW 10
+DRVLW
Sbjct: 169 SDRVLW 174
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 1 TPAWTD 6
TP W D
Sbjct: 654 TPVWND 659
>sp|PHOSP_HMPVC|PHOSPHOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)
Query: 3 AWTDR 7
AWTD+
Sbjct: 70 AWTDK 74
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 1 TPAWTD 6
TP W D
Sbjct: 654 TPVWND 659
>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)
Query: 2 PAWTDRV 8
PA++DR+
Sbjct: 157 PAFSDRI 163
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 TPAWTD 6
TP W D
Sbjct: 654 TPVWND 659
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WTDRVL 9
WTDRV+
Sbjct: 815 WTDRVI 820
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 2 PAWTD 6
P WTD
Sbjct: 653 PLWTD 657
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 2 PAWTD 6
P WTD
Sbjct: 653 PLWTD 657
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 2 PAWTD 6
P WTD
Sbjct: 653 PLWTD 657
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 2 PAWTD 6
P WTD
Sbjct: 653 PLWTD 657
>sp|MATRX_NIPAV|MATRIX protein|Nipah virus
Query: 4 WTDRVLW 10
W +R+ W
Sbjct: 308 WLNRLTW 314
>sp|MATRX_HENDH|MATRIX protein|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 WTDRVLW 10
W +R+ W
Sbjct: 308 WLNRLTW 314
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 WTDRVL 9
WTDRV+
Sbjct: 825 WTDRVI 830
>sp|U21_HHV7R|U21 glycoprotein|Human herpesvirus 7 (strain RK)
Query: 1 TPAWTDRVLW 10
TP + VLW
Sbjct: 299 TPLYGSDVLW 308
>sp|U21_HHV7J|U21 glycoprotein|Human herpesvirus 7 (strain JI)
Query: 1 TPAWTDRVLW 10
TP + VLW
Sbjct: 299 TPLYGSDVLW 308
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 5 TDRVLW 10
TDR++W
Sbjct: 94 TDRLVW 99
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 WTDRVLW 10
W D +W
Sbjct: 3278 WLDNTVW 3284
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 1 TPAWTDR 7
TP W +R
Sbjct: 316 TPEWIER 322
>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United
Query: 1 TPAWTDRVLW 10
TP TD LW
Sbjct: 392 TPPGTDINLW 401
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 WTDRVLW 10
W D +W
Sbjct: 3278 WLDNTVW 3284
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 5 TDRVLW 10
TDR++W
Sbjct: 94 TDRLVW 99
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 5 TDRVLW 10
T+RVLW
Sbjct: 368 TERVLW 373
>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)
Query: 4 WTDRV 8
WT+RV
Sbjct: 232 WTERV 236
>sp|VP24_EBOSU|MEMBRANE-ASSOCIATED protein VP24|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 TPAWTDRVL 9
TP W RV+
Sbjct: 89 TPIWALRVI 97
162|Sequence|806|815|DRVLWRRRKW
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 5 WRRRKW 10
WRRR W
Sbjct: 446 WRRRAW 451
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 VLWRRRKW 10
VLWR+ +W
Sbjct: 323 VLWRKEEW 330
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 VLWRRRKW 10
VLWR+ +W
Sbjct: 323 VLWRKEEW 330
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 1 DRVLWR 6
DRV+WR
Sbjct: 834 DRVMWR 839
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 1 DRVLWR 6
DRV+WR
Sbjct: 858 DRVMWR 863
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 5 WRRRKW 10
WRRR W
Sbjct: 444 WRRRAW 449
>sp|GE_HHV2H|ENVELOPE glycoprotein E|Human herpesvirus 2 (strain HG52)
Query: 5 WRRRKW 10
WRRR W
Sbjct: 439 WRRRSW 444
>sp|VL2_HPV38|MINOR capsid protein L2|Human papillomavirus 38
Query: 5 WRRRK 9
WRRRK
Sbjct: 519 WRRRK 523
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 1 DRVLWR 6
DR LWR
Sbjct: 867 DRTLWR 872
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 1 DRVLWR 6
DR LWR
Sbjct: 883 DRTLWR 888
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DRVLWRRRK 9
+RVL RRR+
Sbjct: 358 NRVLKRRRR 366
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DRVLWRRRKW 10
DR W R +W
Sbjct: 522 DREQWERPRW 531
>sp|VL2_HPV42|MINOR capsid protein L2|Human papillomavirus 42
Query: 4 LWRRRK 9
WRRR+
Sbjct: 458 FWRRRR 463
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DRVLWRRRKW 10
DR W R +W
Sbjct: 522 DREQWERPRW 531
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 1 DRVLWR 6
DR +WR
Sbjct: 840 DRTMWR 845
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 1 DRVLWR 6
DR +WR
Sbjct: 838 DRTMWR 843
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 1 DRVLWR 6
DR +WR
Sbjct: 855 DRTMWR 860
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 1 DRVLWR 6
DR +WR
Sbjct: 852 DRTMWR 857
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 1 DRVLWR 6
DR +WR
Sbjct: 859 DRTMWR 864
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 1 DRVLW 5
DRVLW
Sbjct: 170 DRVLW 174
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 5 WRRRKW 10
WR R W
Sbjct: 2920 WRHRAW 2925
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DRVLWRRRKW 10
DR W R +W
Sbjct: 521 DREQWERPRW 530
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 DRVLW 5
DRVLW
Sbjct: 172 DRVLW 176
>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P
Query: 5 WRRRKW 10
W R+KW
Sbjct: 161 WLRKKW 166
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 2 RVLWRR 7
RVLW R
Sbjct: 918 RVLWNR 923
>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 VLWRRRKW 10
+LW R W
Sbjct: 499 LLWHDRDW 506
>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 VLWRRRKW 10
+LW R W
Sbjct: 499 LLWHDRDW 506
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DRVLWRRRKW 10
DR W R +W
Sbjct: 521 DREQWERPRW 530
>sp|VL2_HPV36|MINOR capsid protein L2|Human papillomavirus 36
Query: 5 WRRRK 9
WR+RK
Sbjct: 510 WRKRK 514
>sp|VL2_HPV32|MINOR capsid protein L2|Human papillomavirus type 32
Query: 4 LWRRRK 9
+WR+R+
Sbjct: 457 MWRKRR 462
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 DRVLWR 6
DR++W+
Sbjct: 953 DRIVWK 958
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 DRVLWR 6
DR++W+
Sbjct: 953 DRIVWK 958
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 DRVLWR 6
DR++W+
Sbjct: 953 DRIVWK 958
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 LWRRRKW 10
+WR ++W
Sbjct: 65 IWRSKEW 71
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 LWRRRKW 10
+WR ++W
Sbjct: 65 IWRSKEW 71
>sp|VE8E2_HPV31|PROTEIN E8^E2C|Human papillomavirus 31
Query: 5 WRRRKW 10
W+R +W
Sbjct: 6 WKRSRW 11
>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 2 RVLWRRR 8
+ +W+RR
Sbjct: 492 KTIWKRR 498
>sp|US28_HCMVT|G-PROTEIN coupled receptor homolog US28|Human cytomegalovirus (strain
Query: 3 VLWRRR 8
+ WRRR
Sbjct: 58 ITWRRR 63
>sp|US28_HCMVA|G-PROTEIN coupled receptor homolog US28|Human cytomegalovirus (strain
Query: 3 VLWRRR 8
+ WRRR
Sbjct: 58 ITWRRR 63
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 DRVLWRRRKW 10
DR +WR K+
Sbjct: 2772 DRTVWRGPKY 2781
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 DRVLWRRRKW 10
DR +WR K+
Sbjct: 2772 DRTVWRGPKY 2781
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 DRVLWRRRKW 10
DR +WR K+
Sbjct: 2772 DRTVWRGPKY 2781
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 DRVLWRRRKW 10
DR +WR K+
Sbjct: 2772 DRTVWRGPKY 2781
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 RVLWRRRK 9
R LW+RR+
Sbjct: 141 RFLWQRRQ 148
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 VLWRRRKW 10
+ W+ +KW
Sbjct: 61 IRWKMKKW 68
>sp|US28_HCMVM|ENVELOPE protein US28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 VLWRRR 8
+ WRRR
Sbjct: 58 ITWRRR 63
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 5 WRRRKW 10
W+ ++W
Sbjct: 27 WKEKEW 32
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 1 DRVLWRRRKW 10
D ++W W
Sbjct: 346 DHIVWINNSW 355
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 DRVLWRRRKW 10
D ++W W
Sbjct: 346 DHIVWINNSW 355
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 1 DRVLWRRRKW 10
D ++W W
Sbjct: 346 DHIVWINNSW 355
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 5 WRRRKW 10
W+ ++W
Sbjct: 27 WKEKEW 32
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 1 DRVLWR 6
DR+ WR
Sbjct: 38 DRMYWR 43
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 1 DRVLWR 6
DR+ WR
Sbjct: 38 DRMYWR 43
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 1 DRVLWR 6
DR+ WR
Sbjct: 38 DRMYWR 43
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 4 LWRRRKW 10
+W KW
Sbjct: 169 IWESNKW 175
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 2 RVLWRRRKW 10
RVL R+ W
Sbjct: 642 RVLTERKLW 650
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 2 RVLWRRRKW 10
RVL R+ W
Sbjct: 642 RVLTERKLW 650
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 RVLWRRRKW 10
RVL R+ W
Sbjct: 642 RVLTERKLW 650
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 2 RVLWRRRKW 10
RVL R+ W
Sbjct: 642 RVLTERKLW 650
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 2 RVLWRRRKW 10
RVL R+ W
Sbjct: 642 RVLTERKLW 650
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 4 LWRRRKW 10
+WR R W
Sbjct: 1108 MWRCRGW 1114
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 4 LWRRRKW 10
+WR R W
Sbjct: 1108 MWRCRGW 1114
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 4 LWRRRKW 10
+WR R W
Sbjct: 1108 MWRCRGW 1114
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 4 LWRRRKW 10
+WR R W
Sbjct: 1108 MWRCRGW 1114
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 4 LWRRRKW 10
+WR R W
Sbjct: 1108 MWRCRGW 1114
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 4 LWRRRKW 10
+WR R W
Sbjct: 1108 MWRCRGW 1114
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 4 LWRRRKW 10
+WR R W
Sbjct: 1108 MWRCRGW 1114
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 4 LWRRRKW 10
+WR R W
Sbjct: 1108 MWRCRGW 1114
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 4 LWRRRKW 10
+WR R W
Sbjct: 1108 MWRCRGW 1114
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 LWRRRKW 10
+W +KW
Sbjct: 65 MWDSKKW 71
163|Sequence|811|820|RRRKWPFDRS
>sp|UL119_HCMVM|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 1 RRRKWPFDR 9
RRR W + R
Sbjct: 319 RRRDWSYKR 327
>sp|UL119_HCMVA|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 1 RRRKWPFDR 9
RRR W + R
Sbjct: 319 RRRDWSYKR 327
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 1 RRRKWPFDRS 10
R W FD+S
Sbjct: 170 RNESWHFDKS 179
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 RRRKWPFD 8
+RR WP +
Sbjct: 1341 KRRSWPLN 1348
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 RRRKWPFD 8
+RR WP +
Sbjct: 1341 KRRSWPLN 1348
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 RRRKWPFD 8
+RR WP +
Sbjct: 1341 KRRSWPLN 1348
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 RRRKWPFD 8
+RR WP +
Sbjct: 1341 KRRSWPLN 1348
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 RRRKWPFD 8
+RR WP +
Sbjct: 1341 KRRSWPLN 1348
>sp|NEF_HV1MV|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 4 KWPFDRS 10
KW FDRS
Sbjct: 188 KWQFDRS 194
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 RRRKWP 6
RRRK+P
Sbjct: 2277 RRRKFP 2282
>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935
Query: 2 RRKWPFDRS 10
+R PFDRS
Sbjct: 415 QRNLPFDRS 423
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 RRKWPFDRS 10
+++WP D S
Sbjct: 89 QKRWPSDDS 97
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 RRRKWP 6
R+R WP
Sbjct: 1368 RKRGWP 1373
>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41
Query: 1 RRRKWP 6
+RR WP
Sbjct: 356 QRRPWP 361
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 RRKWPFDRS 10
+++WP D S
Sbjct: 89 QKRWPSDDS 97
>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7
Query: 2 RRKWP 6
R+KWP
Sbjct: 375 RKKWP 379
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 RRKWPFDRS 10
+++WP D S
Sbjct: 89 QKRWPSDDS 97
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 RRRKWP 6
R+R WP
Sbjct: 1372 RKRGWP 1377
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 RRRKWP 6
R+R WP
Sbjct: 1372 RKRGWP 1377
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 5 WPFDR 9
WP DR
Sbjct: 346 WPLDR 350
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 WPFDR 9
WP DR
Sbjct: 346 WPLDR 350
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 WPFDR 9
WP DR
Sbjct: 346 WPLDR 350
>sp|NEF_HV1AN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 WPFDRS 10
W FDRS
Sbjct: 190 WKFDRS 195
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 2 RRKWPFDRS 10
+R PFDR+
Sbjct: 415 QRNLPFDRT 423
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 2 RRKWPFDRS 10
+R PFDR+
Sbjct: 415 QRNLPFDRT 423
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 2 RRKWPFDRS 10
+R PFDR+
Sbjct: 415 QRNLPFDRT 423
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 2 RRKWPFDRS 10
+R PFDR+
Sbjct: 415 QRNLPFDRT 423
>sp|VE6_HPV61|PROTEIN E6|Human papillomavirus type 61
Query: 2 RRKWPF 7
R WPF
Sbjct: 52 RHNWPF 57
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 2 RRKWPFDRS 10
+R PFDR+
Sbjct: 415 QRNLPFDRT 423
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 2 RRKWPFDRS 10
+R PFDR+
Sbjct: 415 QRNLPFDRT 423
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 2 RRKWPFDRS 10
+R PFDR+
Sbjct: 415 QRNLPFDRT 423
>sp|VP6_ROTHK|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 RKWPFD 8
R W FD
Sbjct: 57 RNWTFD 62
>sp|VP6_ROTHL|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 RKWPFD 8
R W FD
Sbjct: 57 RNWSFD 62
>sp|VP6_ROTHS|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 RKWPFD 8
R W FD
Sbjct: 57 RNWSFD 62
>sp|VP6_ROTHW|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 3 RKWPFD 8
R W FD
Sbjct: 57 RNWTFD 62
>sp|VP6_ROTHU|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 3 RKWPFD 8
R W FD
Sbjct: 57 RNWTFD 62
>sp|VP6_ROTAD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 3 RKWPFD 8
R W FD
Sbjct: 57 RNWTFD 62
>sp|VP6_ROTHP|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 3 RKWPFD 8
R W FD
Sbjct: 57 RNWTFD 62
>sp|VP6_ROTH7|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 3 RKWPFD 8
R W FD
Sbjct: 57 RNWSFD 62
>sp|IR14_HCMVA|UNCHARACTERIZED protein IRL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 KWPFDR 9
+WP DR
Sbjct: 93 RWPVDR 98
>sp|VP6_ROTWI|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 3 RKWPFD 8
R W FD
Sbjct: 57 RNWTFD 62
>sp|VP6_ROTHT|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 3 RKWPFD 8
R W FD
Sbjct: 57 RNWTFD 62
>sp|VP6_ROTHD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 3 RKWPFD 8
R W FD
Sbjct: 57 RNWSFD 62
>sp|VP6_ROTYO|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 RKWPFD 8
R W FD
Sbjct: 57 RNWTFD 62
>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port
Query: 2 RRKWPFDRS 10
+R PFD+S
Sbjct: 415 QRNLPFDKS 423
>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972
Query: 2 RRKWPFDRS 10
+R PFD+S
Sbjct: 415 QRNLPFDKS 423
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 1 RRRKWP 6
RRR WP
Sbjct: 254 RRRGWP 259
>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975
Query: 2 RRKWPFDRS 10
+R PFD+S
Sbjct: 415 QRNLPFDKS 423
>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972
Query: 2 RRKWPFDRS 10
+R PFD+S
Sbjct: 415 QRNLPFDKS 423
164|Sequence|816|825|PFDRSAEDLD
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 FDRSAEDLD 10
FD SAED D
Sbjct: 2232 FDMSAEDFD 2240
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 FDRSAEDLD 10
FD SAED D
Sbjct: 2209 FDMSAEDFD 2217
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 FDRSAEDLD 10
FD SAED D
Sbjct: 2212 FDMSAEDFD 2220
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 FDRSAEDLD 10
FD SAED D
Sbjct: 2146 FDMSAEDFD 2154
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 FDRSAEDLD 10
FD SAED D
Sbjct: 2248 FDMSAEDFD 2256
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 FDRSAEDLD 10
FD SAED D
Sbjct: 2249 FDMSAEDFD 2257
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 FDRSAEDLD 10
FD SAED D
Sbjct: 2172 FDMSAEDFD 2180
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 FDRSAEDLD 10
FD SAED D
Sbjct: 2205 FDMSAEDFD 2213
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 FDRSAEDLD 10
FD SAED D
Sbjct: 2248 FDMSAEDFD 2256
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 FDRSAEDLD 10
FD SAED D
Sbjct: 2215 FDMSAEDFD 2223
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 FDRSAEDLD 10
FD SAED D
Sbjct: 2223 FDMSAEDFD 2231
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 2 FDRSAEDLD 10
FD SAED D
Sbjct: 2209 FDMSAEDFD 2217
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 FDRSAEDLD 10
FD SAED D
Sbjct: 2202 FDMSAEDFD 2210
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 FDRSAEDLD 10
FD SAED D
Sbjct: 2231 FDMSAEDFD 2239
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 FDRSAEDLD 10
FD SAED D
Sbjct: 2248 FDMSAEDFD 2256
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 FDRSAEDLD 10
FD SAED D
Sbjct: 2231 FDMSAEDFD 2239
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 FDRSAEDLD 10
FD SAED D
Sbjct: 2202 FDMSAEDFD 2210
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 FDRSAEDLD 10
FD SAED D
Sbjct: 2250 FDMSAEDFD 2258
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 FDRSAEDLD 10
FD SAED D
Sbjct: 2164 FDMSAEDFD 2172
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 FDRSAEDLD 10
FD SAED D
Sbjct: 2237 FDMSAEDFD 2245
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 FDRSAEDLD 10
FD SAED D
Sbjct: 2209 FDMSAEDFD 2217
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 PFDRSAEDLD 10
P DRS DLD
Sbjct: 1213 PVDRSKIDLD 1222
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 2 FDRSAEDLD 10
FD SAED D
Sbjct: 884 FDMSAEDFD 892
>sp|U24A_HHV6Z|UNCHARACTERIZED protein U24A|Human herpesvirus 6B (strain Z29)
Query: 1 PFDRSAEDL 9
P RSAE+L
Sbjct: 10 PIPRSAEEL 18
>sp|REV_HV2G1|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 PFDRSAEDL 9
P DR+ +DL
Sbjct: 68 PLDRAIQDL 76
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 3 DRSAEDLD 10
DR +DLD
Sbjct: 73 DRGMKDLD 80
>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus
Query: 3 DRSAED 8
DRSAED
Sbjct: 125 DRSAED 130
165|Sequence|821|830|AEDLDLLNAS
>sp|ORF24_TTVV6|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 2 EDLDLLNAS 10
EDLDLL A+
Sbjct: 114 EDLDLLFAA 122
>sp|ORF23_TTVV6|PROBABLE protein VP2|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 2 EDLDLLNAS 10
EDLDLL A+
Sbjct: 114 EDLDLLFAA 122
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 EDLDLLN 8
EDL LLN
Sbjct: 52 EDLTLLN 58
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 AEDLDLLNAS 10
A D+D+ NA+
Sbjct: 1389 ARDIDIKNAA 1398
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 AEDLDLLNAS 10
A D+D+ NA+
Sbjct: 1389 ARDIDIKNAA 1398
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 AEDLDLLNAS 10
A D+D+ NA+
Sbjct: 1389 ARDIDIKNAA 1398
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 AEDLDLLNAS 10
A D+D+ NA+
Sbjct: 1389 ARDIDIKNAA 1398
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 AEDLDLLNAS 10
A D+D+ NA+
Sbjct: 1389 ARDIDIKNAA 1398
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 AEDLDLLNAS 10
A D+D+ NA+
Sbjct: 1389 ARDIDIKNAA 1398
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 AEDLDLLNAS 10
A D+D+ NA+
Sbjct: 1389 ARDIDIKNAA 1398
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 AEDLDLLNAS 10
A D+D+ NA+
Sbjct: 1389 ARDIDIKNAA 1398
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 1 AEDLDLLNAS 10
AEDLD+ S
Sbjct: 409 AEDLDVATIS 418
166|Sequence|826|835|LLNASFQDES
>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)
Query: 2 LNASFQD 8
LNA F+D
Sbjct: 417 LNAEFED 423
167|Sequence|831|840|FQDESKILYT
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 FQDESKILY 9
FQDE+ LY
Sbjct: 95 FQDETWDLY 103
>sp|VE2_HPV51|REGULATORY protein E2|Human papillomavirus 51
Query: 1 FQDESKI 7
F+DE+KI
Sbjct: 171 FKDEAKI 177
>sp|VP6_ROTGA|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 FQDESKILYT 10
F D+ KI+ T
Sbjct: 257 FMDDDKIIQT 266
>sp|VE2_HPV34|REGULATORY protein E2|Human papillomavirus type 34
Query: 2 QDESKILYT 10
QD K+ YT
Sbjct: 163 QDNEKVYYT 171
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 FQDESKIL 8
F+D+ KIL
Sbjct: 1757 FRDDQKIL 1764
168|Sequence|836|845|KILYTWTPGT
>sp|SCAF_HHV8P|CAPSID scaffolding protein|Human herpesvirus 8 type P
Query: 1 KILYTWTPG 9
+IL+TW PG
Sbjct: 104 EILHTWLPG 112
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 ILYTWTP 8
+ YTWTP
Sbjct: 39 VSYTWTP 45
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 ILYTWTP 8
+ YTWTP
Sbjct: 39 VSYTWTP 45
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 ILYTWTPG 9
IL T+TPG
Sbjct: 95 ILKTFTPG 102
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 LYTWTPG 9
+Y W+PG
Sbjct: 340 IYLWSPG 346
>sp|LHDAG_HDVV2|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 4 YTWTPG 9
Y W PG
Sbjct: 205 YYWVPG 210
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 LYTWTPG 9
+Y W PG
Sbjct: 345 VYIWAPG 351
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 LYTWTPG 9
+Y W PG
Sbjct: 345 VYVWAPG 351
>sp|LHDAG_HDVV3|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 4 YTWTPG 9
Y W PG
Sbjct: 205 YYWVPG 210
>sp|SCAF_HHV2H|CAPSID scaffolding protein|Human herpesvirus 2 (strain HG52)
Query: 5 TWTPG 9
TW PG
Sbjct: 201 TWAPG 205
>sp|LHDAG_HDVP1|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 4 YTWTPG 9
Y W PG
Sbjct: 205 YYWVPG 210
>sp|LHDAG_HDVV1|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 4 YTWTPG 9
Y W PG
Sbjct: 205 YYWVPG 210
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 3 LYTWTPG 9
+Y W PG
Sbjct: 345 VYIWAPG 351
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 3 LYTWTPG 9
+Y W PG
Sbjct: 345 VYIWAPG 351
>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 YTWTP 8
Y WTP
Sbjct: 182 YLWTP 186
>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)
Query: 5 TWTPG 9
TW PG
Sbjct: 201 TWAPG 205
>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 YTWTP 8
Y WTP
Sbjct: 182 YLWTP 186
>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 TWTPG 9
TW PG
Sbjct: 315 TWVPG 319
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 4 YTWT 7
YTWT
Sbjct: 3810 YTWT 3813
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 4 YTWT 7
YTWT
Sbjct: 3780 YTWT 3783
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 4 YTWT 7
YTWT
Sbjct: 3760 YTWT 3763
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 YTWT 7
YTWT
Sbjct: 3780 YTWT 3783
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 YTWT 7
YTWT
Sbjct: 3810 YTWT 3813
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 YTWT 7
YTWT
Sbjct: 3760 YTWT 3763
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 YTWT 7
YTWT
Sbjct: 3722 YTWT 3725
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 4 YTWT 7
YTWT
Sbjct: 3722 YTWT 3725
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 ILYTWTP 8
+LY W P
Sbjct: 858 MLYVWVP 864
>sp|NSP1B_ROTGA|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate
Query: 5 TWTPG 9
TW PG
Sbjct: 129 TWIPG 133
169|Sequence|841|850|WTPGTLLHYG
>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 WTPGTLLH 8
W PGT LH
Sbjct: 405 WAPGTPLH 412
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 1 WTPGTLLH 8
W PGT LH
Sbjct: 405 WAPGTPLH 412
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 1 WTPGTLLH 8
W PGT LH
Sbjct: 405 WAPGTPLH 412
>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate
Query: 3 PGTLLHY 9
PGTL++Y
Sbjct: 97 PGTLIYY 103
>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain
Query: 1 WTPGTLLHYG 10
W P L+H G
Sbjct: 275 WGPTILVHAG 284
>sp|MATRX_MUMPS|MATRIX protein|Mumps virus (strain SBL) (MuV)
Query: 1 WTPGTLLHYG 10
W P L+H G
Sbjct: 275 WGPTILVHAG 284
>sp|MATRX_MUMPM|MATRIX protein|Mumps virus genotype B (strain
Query: 1 WTPGTLLHYG 10
W P L+H G
Sbjct: 275 WGPTILVHAG 284
>sp|MATRX_MUMPJ|MATRIX protein|Mumps virus genotype A (strain
Query: 1 WTPGTLLHYG 10
W P L+H G
Sbjct: 275 WGPTILVHAG 284
>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)
Query: 1 WTPGTLLHYG 10
W P L+H G
Sbjct: 275 WGPTILVHAG 284
>sp|PG162_VAR67|PROTEIN OPG162|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 GTLLHY 9
GT LHY
Sbjct: 33 GTFLHY 38
>sp|PG162_VACCC|PROTEIN OPG162|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 GTLLHY 9
GT LHY
Sbjct: 33 GTFLHY 38
>sp|PG162_MONPV|PROTEIN OPG162|Monkeypox virus (MPXV)
Query: 4 GTLLHY 9
GT LHY
Sbjct: 33 GTFLHY 38
>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PGTLLHY 9
PG+L++Y
Sbjct: 97 PGSLIYY 103
>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)
Query: 3 PGTLLHY 9
PG+L++Y
Sbjct: 97 PGSLIYY 103
>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)
Query: 3 PGTLLHY 9
PG+L++Y
Sbjct: 97 PGSLIYY 103
>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)
Query: 3 PGTLLHY 9
PG+L++Y
Sbjct: 97 PGSLIYY 103
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 2 TPGTLL 7
TPGT+L
Sbjct: 33 TPGTML 38
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 1 WTPGTLLH 8
WTP L+H
Sbjct: 33 WTPIDLIH 40
>sp|CAPSD_HPBVH|CAPSID protein precursor|Human picobirnavirus (strain
Query: 1 WTPGTLLHYG 10
W P L YG
Sbjct: 499 WAPQLYLTYG 508
>sp|NCAP_CVHN5|NUCLEOPROTEIN coronavirus HKU1 (isolate N5)
Query: 1 WTPGTLLHYG 10
++PGT+L G
Sbjct: 175 FSPGTILPQG 184
>sp|NCAP_CVHN2|NUCLEOPROTEIN coronavirus HKU1 (isolate N2)
Query: 1 WTPGTLLHYG 10
++PGT+L G
Sbjct: 175 FSPGTILPQG 184
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 1 WTPGTLLHY 9
W P T+L +
Sbjct: 287 WPPYTILSF 295
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 TPGTLLHYG 10
TP + +HY
Sbjct: 187 TPASAVHYA 195
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 3 PGTLLH 8
P TLLH
Sbjct: 1936 PATLLH 1941
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 PGTLLH 8
P TLLH
Sbjct: 1936 PATLLH 1941
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 PGTLLH 8
P TLLH
Sbjct: 1936 PATLLH 1941
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 3 PGTLLH 8
P TLLH
Sbjct: 1936 PATLLH 1941
>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)
Query: 4 GTLLHYG 10
TL+H+G
Sbjct: 318 ATLMHHG 324
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 3 PGTLLH 8
P TLLH
Sbjct: 1936 PATLLH 1941
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 3 PGTLLH 8
P TLLH
Sbjct: 1936 PATLLH 1941
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 3 PGTLLH 8
P TLLH
Sbjct: 1936 PATLLH 1941
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 3 PGTLLH 8
P TLLH
Sbjct: 1936 PATLLH 1941
170|Sequence|846|855|LLHYGRAELK
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 3 HYGRAELK 10
HY R E+K
Sbjct: 371 HYKRGEMK 378
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 3 HYGRAELK 10
HY RAE K
Sbjct: 407 HYKRAERK 414
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 3 HYGRAELK 10
HY RAE K
Sbjct: 411 HYKRAEKK 418
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 3 HYGRAEL 9
HY RAE+
Sbjct: 380 HYKRAEM 386
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 3 HYGRAELK 10
HY R E+K
Sbjct: 364 HYRRGEMK 371
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 3 HYGRAELK 10
HY R E+K
Sbjct: 367 HYMRGEMK 374
>sp|UL65_HCMVA|UNCHARACTERIZED protein UL65|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 YGRAELK 10
YGRAE K
Sbjct: 38 YGRAEAK 44
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 3 HYGRAELK 10
HY AE+K
Sbjct: 412 HYKHAEMK 419
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 3 HYGRAELK 10
HY AE+K
Sbjct: 409 HYKNAEMK 416
>sp|VE2_HPV09|REGULATORY protein E2|Human papillomavirus 9
Query: 1 LLHYGR 6
LLHY R
Sbjct: 42 LLHYAR 47
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 3 HYGRAE 8
HY RAE
Sbjct: 410 HYKRAE 415
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 3 HYGRAE 8
HY RAE
Sbjct: 404 HYKRAE 409
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 3 HYGRAE 8
HY RAE
Sbjct: 405 HYKRAE 410
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 3 HYGRAE 8
HY RAE
Sbjct: 397 HYKRAE 402
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 3 HYGRAE 8
HY RAE
Sbjct: 391 HYKRAE 396
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 3 HYGRAE 8
HY RAE
Sbjct: 405 HYKRAE 410
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 3 HYGRAE 8
HY RAE
Sbjct: 405 HYKRAE 410
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 3 HYGRAELK 10
HY AE+K
Sbjct: 406 HYKTAEMK 413
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 3 HYGRAEL 9
HY RAE+
Sbjct: 374 HYLRAEM 380
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 LHYGR 6
+HYGR
Sbjct: 196 IHYGR 200
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LHYGRAELK 10
L Y +AELK
Sbjct: 332 LEYVKAELK 340
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 3 HYGRAELK 10
HY RA+ K
Sbjct: 397 HYKRAQRK 404
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 3 HYGRAE 8
HY RAE
Sbjct: 410 HYRRAE 415
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 LHYGR 6
+HYGR
Sbjct: 202 VHYGR 206
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 LHYGR 6
+HYGR
Sbjct: 197 VHYGR 201
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 3 HYGRAELK 10
HY RA+ K
Sbjct: 413 HYKRAQKK 420
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 LLHYGRAELK 10
LL+Y AE++
Sbjct: 379 LLNYALAEMR 388
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 LLHYGRAELK 10
LL+Y AE++
Sbjct: 381 LLNYALAEMR 390
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 4 YGRAELK 10
+GR ELK
Sbjct: 327 FGRLELK 333
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 4 YGRAELK 10
+GR ELK
Sbjct: 327 FGRLELK 333
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 4 YGRAELK 10
+GR ELK
Sbjct: 327 FGRLELK 333
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 4 YGRAELK 10
+GR ELK
Sbjct: 327 FGRLELK 333
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 2 LHYGRAELK 10
LH+GR+ K
Sbjct: 181 LHHGRSVTK 189
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 HYGRAELK 10
+YG+ +LK
Sbjct: 2096 YYGQVQLK 2103
171|Sequence|851|860|RAELKTSDHR
>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)
Query: 1 RAELKTSDHR 10
R+E KT+D R
Sbjct: 347 RSEFKTNDWR 356
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 3 ELKTSD 8
ELKTSD
Sbjct: 813 ELKTSD 818
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 3 ELKTSD 8
ELKTSD
Sbjct: 813 ELKTSD 818
>sp|UL65_HCMVA|UNCHARACTERIZED protein UL65|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RAELKTSDHR 10
RAE K + HR
Sbjct: 40 RAEAKKTHHR 49
172|Sequence|856|865|TSDHRPVVAL
>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 TSDHRPVV 8
T+DH PVV
Sbjct: 492 TNDHIPVV 499
>sp|PG056_VACCC|PROTEIN OPG056|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TSDHRPVV 8
T+DH PVV
Sbjct: 492 TNDHIPVV 499
>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)
Query: 1 TSDHRPVV 8
T+DH PVV
Sbjct: 492 TNDHIPVV 499
>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)
Query: 1 TSDHRPVV 8
T+DH PVV
Sbjct: 492 TNDHIPVV 499
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 DHRPVVAL 10
DHRPV +
Sbjct: 5384 DHRPVCSF 5391
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 TSDHRPVV 8
T+DH PVV
Sbjct: 492 TNDHIPVV 499
>sp|PHOSP_PI3H4|PHOSPHOPROTEIN parainfluenza 3 virus (strain
Query: 1 TSDHRP 6
TSDH+P
Sbjct: 262 TSDHKP 267
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 4 HRPVVAL 10
HRP+V L
Sbjct: 551 HRPLVQL 557
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 TSDHRPVVAL 10
T+D+RPV L
Sbjct: 763 TNDYRPVQDL 772
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 TSDHRPVVAL 10
T+D+RPV L
Sbjct: 763 TNDYRPVQDL 772
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 TSDHRPVVAL 10
T+D+RPV L
Sbjct: 763 TNDYRPVQDL 772
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 4 HRPVV 8
HRPVV
Sbjct: 178 HRPVV 182
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 4 HRPVV 8
HRPVV
Sbjct: 178 HRPVV 182
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 HRPVV 8
HRPVV
Sbjct: 178 HRPVV 182
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 4 HRPVV 8
HRPVV
Sbjct: 178 HRPVV 182
>sp|VU84_HHV6U|PROTEIN U84|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 HRPVVAL 10
H PVVA+
Sbjct: 232 HEPVVAI 238
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 4 HRPVV 8
HRPVV
Sbjct: 178 HRPVV 182
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 HRPVV 8
HRPVV
Sbjct: 178 HRPVV 182
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 SDHRPVVA 9
+DH P++A
Sbjct: 1161 ADHAPIIA 1168
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 1 TSDHRPVVA 9
T+D++P+ A
Sbjct: 174 TADNKPIYA 182
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 1 TSDHRPVVA 9
T+D P+V+
Sbjct: 820 TTDENPIVS 828
>sp|FUS_MEASI|FUSION glycoprotein F0|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 SDHRPVV 8
+DH PVV
Sbjct: 420 ADHCPVV 426
>sp|FUS_MEASA|FUSION glycoprotein F0|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 SDHRPVV 8
+DH PVV
Sbjct: 417 ADHCPVV 423
>sp|FUS_MEASZ|FUSION glycoprotein F0|Measles virus (strain Edmonston-Zagreb vaccine)
Query: 2 SDHRPVV 8
+DH PVV
Sbjct: 417 ADHCPVV 423
>sp|FUS_MEASP|FUSION glycoprotein F0|Measles virus (strain Philadelphia-26) (MeV)
Query: 2 SDHRPVV 8
+DH PVV
Sbjct: 417 ADHCPVV 423
>sp|FUS_MEASL|FUSION glycoprotein F0|Measles virus (strain Leningrad-16) (MeV)
Query: 2 SDHRPVV 8
+DH PVV
Sbjct: 417 ADHCPVV 423
>sp|FUS_MEASH|FUSION glycoprotein F0|Measles virus (strain Halle) (MeV)
Query: 2 SDHRPVV 8
+DH PVV
Sbjct: 417 ADHCPVV 423
>sp|FUS_MEASF|FUSION glycoprotein F0|Measles virus (strain Edmonston B)
Query: 2 SDHRPVV 8
+DH PVV
Sbjct: 417 ADHCPVV 423
>sp|FUS_MEASE|FUSION glycoprotein F0|Measles virus (strain Edmonston) (MeV)
Query: 2 SDHRPVV 8
+DH PVV
Sbjct: 417 ADHCPVV 423
>sp|FUS_MEASC|FUSION glycoprotein F0|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 SDHRPVV 8
+DH PVV
Sbjct: 417 ADHCPVV 423
>sp|VU84_HHV6Z|PROTEIN U84|Human herpesvirus 6B (strain Z29)
Query: 4 HRPVVAL 10
H PVVA+
Sbjct: 232 HEPVVAI 238
>sp|FUS_MEASY|FUSION glycoprotein F0|Measles virus (strain Yamagata-1) (MeV)
Query: 2 SDHRPVV 8
+DH PVV
Sbjct: 417 ADHCPVV 423
>sp|UL117_HCMVM|PROTEIN UL117|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TSDHRPV 7
TS HRP+
Sbjct: 222 TSHHRPL 228
>sp|UL117_HCMVA|PROTEIN UL117|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TSDHRPV 7
TS HRP+
Sbjct: 221 TSHHRPL 227
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 1 TSDHRPVV 8
T D RPV+
Sbjct: 471 TGDDRPVL 478
173|Sequence|861|870|PVVALIDIDI
>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P
Query: 2 VVALIDIDI 10
V A+ID+DI
Sbjct: 2 VQAMIDMDI 10
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 PVVALIDIDI 10
P++ ++++DI
Sbjct: 1740 PLIGIMNVDI 1749
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 1 PVVALIDI 8
P+VA +DI
Sbjct: 203 PIVAPVDI 210
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 VVALIDID 9
+VALIDI+
Sbjct: 251 LVALIDIN 258
>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 2 VVALIDID 9
+VALIDI+
Sbjct: 251 LVALIDIN 258
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 2 VVALIDID 9
+VALIDI+
Sbjct: 251 LVALIDIN 258
>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 VVALIDID 9
+VALIDI+
Sbjct: 251 LVALIDIN 258
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 VVALIDID 9
+VALIDI+
Sbjct: 251 LVALIDIN 258
>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 VVALIDID 9
+VALIDI+
Sbjct: 251 LVALIDIN 258
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 2 VVALIDID 9
+VALIDI+
Sbjct: 251 LVALIDIN 258
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 VVALIDID 9
+VAL+DI+
Sbjct: 251 LVALVDIN 258
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 2 VVALIDID 9
+VAL+DI+
Sbjct: 251 LVALVDIN 258
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 2 VVALIDID 9
+VAL+DI+
Sbjct: 251 LVALVDIN 258
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 2 VVALIDID 9
+VAL+DI+
Sbjct: 251 LVALVDIN 258
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 2 VVALIDID 9
+VAL+DI+
Sbjct: 251 LVALVDIN 258
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 VVALIDID 9
V ALI++D
Sbjct: 1281 VTALIEVD 1288
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 2 VVALIDID 9
+VAL+DI+
Sbjct: 251 LVALVDIN 258
>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 2 VVALIDID 9
+VAL+DI+
Sbjct: 251 LVALVDIN 258
174|Sequence|866|875|IDIDIFEVEA
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 IDIDIFE 7
ID++IFE
Sbjct: 6467 IDVEIFE 6473
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 IDIDIFEVE 9
IDID F V+
Sbjct: 1189 IDIDAFPVK 1197
>sp|VP7_ROTHS|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 DIDIFEVEA 10
D+D FE+ A
Sbjct: 211 DVDTFEIVA 219
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 IDIDIFEVE 9
IDID F V+
Sbjct: 1189 IDIDAFPVK 1197
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 IDIDIFEVE 9
+D+D+ E+E
Sbjct: 524 VDVDVEELE 532
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 2 DIDIFEVEA 10
DID + VEA
Sbjct: 256 DIDTYIVEA 264
>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5
Query: 2 DIDIFE 7
D+D+FE
Sbjct: 309 DLDVFE 314
>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)
Query: 2 DIDIFEVEA 10
DID + VEA
Sbjct: 256 DIDTYIVEA 264
>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)
Query: 2 DIDIFEVEA 10
DID + VEA
Sbjct: 256 DIDTYIVEA 264
>sp|NCAP_MEASC|NUCLEOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 2 DIDIFEVEA 10
DID + VEA
Sbjct: 256 DIDTYIVEA 264
>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)
Query: 2 DIDIFEVEA 10
DID + VEA
Sbjct: 256 DIDTYIVEA 264
>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 2 DIDIFEVEA 10
DID + VEA
Sbjct: 256 DIDTYIVEA 264
>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 2 DIDIFEVEA 10
DID + VEA
Sbjct: 256 DIDTYIVEA 264
>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)
Query: 2 DIDIFEVEA 10
DID + VEA
Sbjct: 256 DIDTYIVEA 264
>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)
Query: 2 DIDIFEVEA 10
DID + VEA
Sbjct: 256 DIDTYIVEA 264
>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 2 DIDIFEVEA 10
DID + VEA
Sbjct: 256 DIDTYIVEA 264
>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain
Query: 1 IDIDIFEV 8
+DID+F++
Sbjct: 356 LDIDMFQL 363
>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b
Query: 2 DIDIFE 7
D+D+FE
Sbjct: 309 DLDVFE 314
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 1 IDIDIFEVE 9
ID+ +FE E
Sbjct: 379 IDMRVFETE 387
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 1 IDIDIFEVE 9
ID+ +FE E
Sbjct: 379 IDMRVFETE 387
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 IDIDIFE 7
+D+++FE
Sbjct: 6490 VDVELFE 6496
175|Sequence|871|880|FEVEAEERQN
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 4 EAEERQN 10
+A+ERQN
Sbjct: 1544 QAQERQN 1550
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 3 VEAEERQ 9
VEAE+RQ
Sbjct: 749 VEAEDRQ 755
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 EVEAEERQ 9
EVE EER+
Sbjct: 1445 EVEREERR 1452
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 FEVEAEERQN 10
E+E E+R+N
Sbjct: 771 LEIECEQREN 780
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 FEVEAEERQN 10
E+E E+R+N
Sbjct: 771 LEIECEQREN 780
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 EVEAEER 8
EVE EER
Sbjct: 1447 EVEKEER 1453
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 EVEAEER 8
EVE EER
Sbjct: 1447 EVEKEER 1453
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 1 FEVEAEERQ 9
FE++ ERQ
Sbjct: 563 FEIQGPERQ 571
>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)
Query: 1 FEVEAEER 8
F+V++EER
Sbjct: 167 FDVQSEER 174
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 2 EVEAEERQ 9
EVE ERQ
Sbjct: 143 EVETTERQ 150
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 VEAEERQ 9
V+AE+RQ
Sbjct: 395 VDAEQRQ 401
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 FEVEAEE 7
FEVEA++
Sbjct: 25 FEVEAQQ 31
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 2 EVEAEERQ 9
EVE ERQ
Sbjct: 137 EVETYERQ 144
>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 FEVEAEER 8
F+V++EER
Sbjct: 166 FDVQSEER 173
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 VEAEERQ 9
V+AE+RQ
Sbjct: 395 VDAEQRQ 401
176|Sequence|876|885|EERQNIYKEV
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 EERQNIYKEV 10
E+RQ YKEV
Sbjct: 480 EQRQRPYKEV 489
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 EERQNIYKEV 10
E+RQ YKEV
Sbjct: 479 EQRQRPYKEV 488
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 2 ERQNIYKEV 10
E QN+Y E+
Sbjct: 420 ESQNLYNEM 428
>sp|UL49_HHV7J|PROTEIN U33|Human herpesvirus 7 (strain JI)
Query: 4 QNIYKE 9
QNIY+E
Sbjct: 441 QNIYRE 446
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 EERQNIYKEV 10
E+R+ YKEV
Sbjct: 481 EQRERPYKEV 490
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 EERQNIYKEV 10
E+R+ YKEV
Sbjct: 480 EQRERPYKEV 489
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 EERQNIYKEV 10
E+R+ YKEV
Sbjct: 480 EQRERPYKEV 489
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 EERQNIYKEV 10
E+R+ YKEV
Sbjct: 478 EQRERPYKEV 487
>sp|UNG_HHV6Z|URACIL-DNA glycosylase|Human herpesvirus 6B (strain Z29)
Query: 1 EERQNIYKEV 10
E +NI+KE+
Sbjct: 115 ESLKNIFKEL 124
>sp|UNG_HHV6U|URACIL-DNA glycosylase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 EERQNIYKEV 10
E +NI+KE+
Sbjct: 115 ESLKNIFKEL 124
>sp|IR10_HCMVM|PROTEIN IRL10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 ERQNIYKEV 10
++QNIY+ +
Sbjct: 133 KKQNIYERI 141
>sp|IR10_HCMVA|PROTEIN IRL10|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 ERQNIYKEV 10
++QNIY+ +
Sbjct: 134 KKQNIYERI 142
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 EERQNIYKEV 10
E+R+ YKEV
Sbjct: 480 EQRERPYKEV 489
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 EERQNIYKEV 10
E+R+ YKEV
Sbjct: 480 EQRERPYKEV 489
177|Sequence|881|890|IYKEVIAVQG
>sp|UL24_HHV6Z|PROTEIN UL24 homolog|Human herpesvirus 6B (strain Z29)
Query: 1 IYKEVIAVQG 10
IYK+++++QG
Sbjct: 21 IYKQILSLQG 30
>sp|UL24_HHV6U|PROTEIN UL24 homolog|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IYKEVIAVQG 10
IYK+++++QG
Sbjct: 21 IYKQILSLQG 30
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IYKEVIAVQG 10
+Y E AVQG
Sbjct: 110 LYNEQFAVQG 119
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IYKEVIAVQG 10
+Y E AVQG
Sbjct: 110 LYNEQFAVQG 119
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IYKEVIAVQG 10
+Y E AVQG
Sbjct: 110 LYNEQFAVQG 119
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IYKEVIAVQG 10
+Y E AVQG
Sbjct: 110 LYNEQFAVQG 119
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IYKEVIAVQG 10
+Y E AVQG
Sbjct: 110 LYNEQFAVQG 119
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IYKEVIAVQG 10
+Y E AVQG
Sbjct: 110 LYNEQFAVQG 119
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IYKEVIAVQG 10
+Y E AVQG
Sbjct: 110 LYNEQFAVQG 119
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IYKEVIAVQG 10
+Y E AVQG
Sbjct: 110 LYNEQFAVQG 119
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IYKEVIAVQG 10
+Y E AVQG
Sbjct: 89 LYNEQFAVQG 98
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IYKEVIAVQG 10
+Y E AVQG
Sbjct: 110 LYNEQFAVQG 119
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IYKEVIAVQG 10
+Y E AVQG
Sbjct: 110 LYNEQFAVQG 119
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 IYKEVIAVQG 10
+Y E AVQG
Sbjct: 110 LYNEQFAVQG 119
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 KEVIAVQG 10
KEV++V+G
Sbjct: 2594 KEVMSVKG 2601
>sp|TRX1_HHV6U|TRIPLEX capsid protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IYKEVIA 7
+YKEV+A
Sbjct: 200 VYKEVLA 206
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 IYKEVIA 7
++KEVIA
Sbjct: 1382 LFKEVIA 1388
178|Sequence|886|895|IAVQGPPDGT
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 1 IAVQGPPD 8
IA+ GPPD
Sbjct: 468 IAIVGPPD 475
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 1 IAVQGPPD 8
IA+ GPPD
Sbjct: 471 IAIVGPPD 478
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 1 IAVQGPPD 8
IA+ GPPD
Sbjct: 474 IAIVGPPD 481
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 1 IAVQGPPD 8
IA+ GPPD
Sbjct: 474 IAIVGPPD 481
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 1 IAVQGPPD 8
IA+ GPPD
Sbjct: 474 IAIVGPPD 481
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 1 IAVQGPPD 8
I + GPPD
Sbjct: 423 IVIHGPPD 430
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 1 IAVQGPPD 8
I + GPPD
Sbjct: 424 IVIHGPPD 431
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 1 IAVQGPPD 8
I +QGPP+
Sbjct: 475 IVIQGPPN 482
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 IAVQGPP 7
+ VQGPP
Sbjct: 5588 VTVQGPP 5594
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 1 IAVQGPPD 8
I + GPPD
Sbjct: 433 ILIHGPPD 440
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 1 IAVQGPPD 8
I + GPPD
Sbjct: 418 IVIYGPPD 425
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 1 IAVQGPPD 8
I + GPPD
Sbjct: 471 IVIYGPPD 478
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 1 IAVQGPPD 8
I + GPPD
Sbjct: 472 ICIVGPPD 479
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 VQGPP 7
VQGPP
Sbjct: 5576 VQGPP 5580
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 VQGPP 7
VQGPP
Sbjct: 5614 VQGPP 5618
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 VQGPP 7
VQGPP
Sbjct: 5634 VQGPP 5638
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 VQGPP 7
VQGPP
Sbjct: 5664 VQGPP 5668
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 1 IAVQGPPD 8
I + GPPD
Sbjct: 474 IVLYGPPD 481
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 1 IAVQGPPD 8
I + GPPD
Sbjct: 473 ICIVGPPD 480
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 1 IAVQGPPDGT 10
I + PPDG+
Sbjct: 385 IQMYTPPDGS 394
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 IAVQGPPDGT 10
I + PPDG+
Sbjct: 385 IQMYTPPDGS 394
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 1 IAVQGPPDGT 10
I + PPDG+
Sbjct: 385 IQMYTPPDGS 394
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 IAVQGPPDGT 10
I + PPDG+
Sbjct: 385 IQMYTPPDGS 394
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 1 IAVQGPPDGT 10
I + PPDG+
Sbjct: 385 IQMYTPPDGS 394
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 1 IAVQGPPDGT 10
I + PPDG+
Sbjct: 385 IQMYTPPDGS 394
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 VQGPP 7
+QGPP
Sbjct: 5251 IQGPP 5255
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 VQGPP 7
+QGPP
Sbjct: 5276 IQGPP 5280
>sp|GK_HHV1K|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain KOS)
Query: 1 IAVQGPPDGT 10
+ Q PPD T
Sbjct: 92 VPFQVPPDAT 101
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 5 GPPDGT 10
GPPD T
Sbjct: 631 GPPDRT 636
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 1 IAVQGPPD 8
I + GPPD
Sbjct: 456 ILLYGPPD 463
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 1 IAVQGPPD 8
+ + GPPD
Sbjct: 428 LLIYGPPD 435
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 1 IAVQGPPD 8
+ + GPPD
Sbjct: 431 LLIYGPPD 438
>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979
Query: 1 IAVQGPPDG 9
I + GP DG
Sbjct: 193 IGISGPDDG 201
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 3 VQGPPD 8
+ GPPD
Sbjct: 428 IYGPPD 433
>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983
Query: 1 IAVQGPPDG 9
I + GP DG
Sbjct: 193 IGISGPDDG 201
>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980
Query: 1 IAVQGPPDG 9
I + GP DG
Sbjct: 193 IGISGPDDG 201
>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954
Query: 1 IAVQGPPDG 9
I + GP DG
Sbjct: 193 IGISGPDDG 201
>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977
Query: 1 IAVQGPPDG 9
I + GP DG
Sbjct: 193 IGISGPDDG 201
>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978
Query: 1 IAVQGPPDG 9
I + GP DG
Sbjct: 193 IGISGPDDG 201
>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951
Query: 1 IAVQGPPDG 9
I + GP DG
Sbjct: 193 IGISGPDDG 201
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 QGPPD 8
+GPPD
Sbjct: 727 RGPPD 731
>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940
Query: 1 IAVQGPPDG 9
I + GP DG
Sbjct: 193 IGISGPDDG 201
>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 IAVQGPPDG 9
I + GP DG
Sbjct: 193 IGISGPDDG 201
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 6 PPDGT 10
PPDGT
Sbjct: 524 PPDGT 528
>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort
Query: 1 IAVQGPPDG 9
I + GP DG
Sbjct: 193 IGISGPDDG 201
>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943
Query: 1 IAVQGPPDG 9
I + GP DG
Sbjct: 193 IGISGPDDG 201
>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 IAVQGPPDG 9
IA+ GP +G
Sbjct: 173 IAISGPDNG 181
>sp|PG125_VACCT|SCAFFOLD protein OPG125|Vaccinia virus (strain Tian Tan)
Query: 1 IAVQGPPDG 9
I GPP G
Sbjct: 297 IVSDGPPTG 305
>sp|PG125_VACCC|SCAFFOLD protein OPG125|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 IAVQGPPDG 9
I GPP G
Sbjct: 297 IVSDGPPTG 305
>sp|PG125_VACCA|SCAFFOLD protein OPG125|Vaccinia virus (strain Ankara) (VACV)
Query: 1 IAVQGPPDG 9
I GPP G
Sbjct: 297 IVSDGPPTG 305
>sp|PG125_MONPV|SCAFFOLD protein OPG125|Monkeypox virus (MPXV)
Query: 1 IAVQGPPDG 9
I GPP G
Sbjct: 297 IVSDGPPTG 305
>sp|PG125_VAR67|SCAFFOLD protein OPG125|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 IAVQGPPDG 9
I GPP G
Sbjct: 297 IVSDGPPTG 305
>sp|D13_VARV|SCAFFOLD protein D13|Variola virus
Query: 1 IAVQGPPDG 9
I GPP G
Sbjct: 297 IVSDGPPTG 305
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 1 IAVQGPPDGT 10
+ V PP GT
Sbjct: 403 VGVAPPPSGT 412
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 4 QGPPD 8
+GPPD
Sbjct: 1182 EGPPD 1186
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 4 QGPPD 8
+GPPD
Sbjct: 1182 EGPPD 1186
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 4 QGPPD 8
+GPPD
Sbjct: 1182 EGPPD 1186
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 1 IAVQGPPDGT 10
+ V PP GT
Sbjct: 403 VGVAPPPSGT 412
>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 AVQGPPDGT 10
++ GPP G+
Sbjct: 286 SILGPPSGS 294
179|Sequence|891|900|PPDGTVLVSI
>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)
Query: 1 PPDGTVL 7
PP GT+L
Sbjct: 54 PPKGTIL 60
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PDGTVL 7
PDGTV
Sbjct: 140 PDGTVF 145
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 2 PDGTVL 7
PDGTV
Sbjct: 140 PDGTVF 145
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 2 PDGTVL 7
PDGTV
Sbjct: 140 PDGTVF 145
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 2 PDGTVLVS 9
PDGT+ S
Sbjct: 724 PDGTIPAS 731
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 2 PDGTVLVS 9
PDGT+ S
Sbjct: 724 PDGTIPAS 731
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 PPDGTVLVSI 10
PP G + VS+
Sbjct: 717 PPGGPIPVSV 726
>sp|UL129_HCMVA|UNCHARACTERIZED protein UL129|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PPDGTVL 7
PP GT+L
Sbjct: 65 PPAGTLL 71
>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)
Query: 2 PDGTVLV 8
PDG VL+
Sbjct: 386 PDGNVLI 392
>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)
Query: 2 PDGTVLV 8
PDG VL+
Sbjct: 386 PDGNVLI 392
>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins
Query: 2 PDGTVLV 8
PDG VL+
Sbjct: 386 PDGNVLI 392
>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)
Query: 2 PDGTVLV 8
PDG VL+
Sbjct: 386 PDGNVLI 392
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 2 PDGTVLV 8
PDG VL+
Sbjct: 386 PDGNVLI 392
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 1 PPDGTVL 7
PP GT+L
Sbjct: 92 PPCGTLL 98
>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 PDGTVLV 8
PDG VL+
Sbjct: 386 PDGQVLI 392
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 PDGTVLV 8
P GT+LV
Sbjct: 6886 PAGTILV 6892
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 PPDGTVL 7
PP GTV+
Sbjct: 83 PPRGTVV 89
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 PPDGTVL 7
PP GTV+
Sbjct: 83 PPRGTVV 89
>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40
Query: 1 PPDGTV 6
PP GTV
Sbjct: 56 PPTGTV 61
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 1 PPDGTVLVSI 10
PP +V VSI
Sbjct: 434 PPGDSVTVSI 443
>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 2 PDGTVLV 8
PDG VL+
Sbjct: 386 PDGHVLI 392
>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)
Query: 2 PDGTVLV 8
PDG VL+
Sbjct: 386 PDGHVLI 392
>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)
Query: 2 PDGTVLV 8
PDG VL+
Sbjct: 386 PDGHVLI 392
>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)
Query: 2 PDGTVLV 8
PDG VL+
Sbjct: 386 PDGHVLI 392
>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 2 PDGTVLV 8
PDG VL+
Sbjct: 386 PDGHVLI 392
>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)
Query: 2 PDGTVLV 8
PDG VL+
Sbjct: 386 PDGHVLI 392
>sp|US15_HCMVM|MEMBRANE protein US15|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PPDGTVL 7
P DGTV+
Sbjct: 10 PTDGTVI 16
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 2 PDGTVLV 8
PDG VL+
Sbjct: 386 PDGHVLI 392
>sp|US15_HCMVA|UNCHARACTERIZED protein HVLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PPDGTVL 7
P DGTV+
Sbjct: 10 PTDGTVI 16
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 1 PPDGTVLVSI 10
PP +V VSI
Sbjct: 434 PPGDSVTVSI 443
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 1 PPDGTVLVSI 10
PP +V VSI
Sbjct: 434 PPGDSVTVSI 443
>sp|BTRF1_EBVG|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PPDGTVLVSI 10
PP GT++ ++
Sbjct: 348 PPSGTIMRNV 357
>sp|BTRF1_EBVB9|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PPDGTVLVSI 10
PP GT++ ++
Sbjct: 348 PPSGTIMRNV 357
>sp|BTRF1_EBVA8|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PPDGTVLVSI 10
PP GT++ ++
Sbjct: 348 PPSGTIMRNV 357
180|Sequence|896|905|VLVSIKSSLP
***** No hits found ******
181|Sequence|901|910|KSSLPENNFF
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 SSLPENNFF 10
++ P NNF+
Sbjct: 1677 TAFPSNNFY 1685
>sp|CEP2_HHV2H|CYTOPLASMIC envelopment protein 2|Human herpesvirus 2 (strain HG52)
Query: 4 LPENNFF 10
LP N FF
Sbjct: 105 LPSNTFF 111
>sp|CEP2_HHV11|CYTOPLASMIC envelopment protein 2|Human herpesvirus 1 (strain 17)
Query: 4 LPENNFF 10
LP N FF
Sbjct: 107 LPPNTFF 113
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 SSLPENNF 9
S++P+ NF
Sbjct: 973 SNIPQGNF 980
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 SSLPENNFF 10
+ +P+ NFF
Sbjct: 129 NEIPDGNFF 137
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 1 KSSLPENNFF 10
K +LPE N +
Sbjct: 81 KFTLPETNLY 90
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 5 PENNFF 10
P+N+FF
Sbjct: 159 PDNSFF 164
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 1 KSSLPENNFF 10
K +LPE N +
Sbjct: 81 KFTLPETNLY 90
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 5 PENNFF 10
P+N+FF
Sbjct: 159 PDNSFF 164
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 5 PENNFF 10
P+N+FF
Sbjct: 159 PDNSFF 164
182|Sequence|906|915|ENNFFDDALI
>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)
Query: 2 NNFFDDAL 9
N FDDAL
Sbjct: 140 NGVFDDAL 147
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 NNFFDDAL 9
N FDDAL
Sbjct: 140 NGVFDDAL 147
>sp|PROF_VACCT|PROFILIN virus (strain Tian Tan)
Query: 1 ENNFFDDALI 10
+NN F+DA I
Sbjct: 13 KNNKFEDAAI 22
>sp|PROF_VACCC|PROFILIN virus (strain Copenhagen) (VACV)
Query: 1 ENNFFDDALI 10
+NN F+DA I
Sbjct: 13 KNNKFEDAAI 22
>sp|PROF_CWPXB|PROFILIN virus (strain Brighton Red)
Query: 1 ENNFFDDALI 10
+NN F+DA I
Sbjct: 13 KNNKFEDAAI 22
>sp|PROF_VACCA|PROFILIN virus (strain Ankara) (VACV)
Query: 1 ENNFFDDALI 10
+NN F+DA I
Sbjct: 13 KNNKFEDAAI 22
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 ENNFFDDALI 10
EN+ F D+LI
Sbjct: 1438 ENDLFSDSLI 1447
>sp|PROF_MONPZ|PROFILIN virus (strain Zaire-96-I-16) (MPXV)
Query: 1 ENNFFDDALI 10
+NN F+DA I
Sbjct: 13 KNNKFEDAAI 22
>sp|PROF_MONPV|PROFILIN virus (MPXV)
Query: 1 ENNFFDDALI 10
+NN F+DA I
Sbjct: 13 KNNKFEDAAI 22
>sp|PROF_CWPXG|PROFILIN virus (strain GRI-90 /
Query: 1 ENNFFDDALI 10
+NN F+DA I
Sbjct: 13 KNNKFEDAAI 22
>sp|PROF_VARV|PROFILIN virus
Query: 1 ENNFFDDALI 10
+NN F+DA I
Sbjct: 13 KNNNFEDAAI 22
>sp|PROF_VAR67|PROFILIN virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 ENNFFDDALI 10
+NN F+DA I
Sbjct: 13 KNNNFEDAAI 22
>sp|E1A_ADE07|EARLY E1A protein|Human adenovirus B serotype 7
Query: 2 NNFFDDALI 10
N FF D+++
Sbjct: 65 NGFFTDSML 73
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 1 ENNFFDDALI 10
+NN+ D+A I
Sbjct: 322 DNNYLDEADI 331
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin)
Query: 5 FDDALI 10
+DDALI
Sbjct: 16 YDDALI 21
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 FDDALI 10
+DDALI
Sbjct: 16 YDDALI 21
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 1 ENNFFDDALI 10
+NN+ D+A I
Sbjct: 320 DNNYLDEADI 329
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 1 ENNFFDDALI 10
+NN+ D+A I
Sbjct: 321 DNNYLDEADI 330
>sp|V55A_HHV7J|UNCHARACTERIZED protein U55A|Human herpesvirus 7 (strain JI)
Query: 2 NNFFDDAL 9
N+FF D+L
Sbjct: 382 NDFFSDSL 389
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 1 ENNFFDDALI 10
+N+F DD+ I
Sbjct: 352 DNDFIDDSDI 361
>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)
Query: 4 FFDDALI 10
F+DD+L+
Sbjct: 68 FYDDSLL 74
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 NFFDD 7
N+FDD
Sbjct: 2130 NYFDD 2134
183|Sequence|911|920|DDALIDELLQ
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 1 DDALIDELLQ 10
DDAL+ +LQ
Sbjct: 612 DDALLSSILQ 621
>sp|VL2_HPV36|MINOR capsid protein L2|Human papillomavirus 36
Query: 1 DDALIDELLQ 10
DD L+DE ++
Sbjct: 420 DDLLLDEAVE 429
>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8
Query: 1 DDALIDELLQ 10
DD L+DE ++
Sbjct: 420 DDLLLDETVE 429
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DDALIDEL 8
DD +I+EL
Sbjct: 527 DDTVIEEL 534
>sp|VL2_HPV49|MINOR capsid protein L2|Human papillomavirus type 49
Query: 1 DDALIDE 7
DD L+DE
Sbjct: 423 DDLLLDE 429
>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21
Query: 1 DDALIDE 7
DD L+DE
Sbjct: 420 DDLLLDE 426
>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20
Query: 1 DDALIDE 7
DD L+DE
Sbjct: 418 DDLLLDE 424
>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12
Query: 1 DDALIDELLQ 10
DD L+DE ++
Sbjct: 420 DDLLLDEAVE 429
>sp|VL2_HPV14|MINOR capsid protein L2|Human papillomavirus 14
Query: 1 DDALIDE 7
DD L+DE
Sbjct: 419 DDLLLDE 425
>sp|VL2_HPV24|MINOR capsid protein L2|Human papillomavirus 24
Query: 2 DALIDE 7
DAL+DE
Sbjct: 425 DALLDE 430
>sp|VL2_HPV25|MINOR capsid protein L2|Human papillomavirus 25
Query: 1 DDALIDE 7
DD L+DE
Sbjct: 420 DDLLLDE 426
184|Sequence|916|925|DELLQQFASF
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 DELLQQF 7
D+LLQ+F
Sbjct: 1238 DQLLQRF 1244
>sp|BEL1_SFV1|PROTEIN Bel-1|Simian foamy virus type 1
Query: 1 DELLQQF 7
D+LL QF
Sbjct: 301 DQLLSQF 307
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 1 DELLQQF 7
D+LLQ+F
Sbjct: 1238 DQLLQRF 1244
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 DELLQQF 7
D+LLQ+F
Sbjct: 1238 DQLLQRF 1244
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 DELLQQF 7
D+LLQ+F
Sbjct: 1236 DQLLQRF 1242
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 DELLQQF 7
D+LLQ+F
Sbjct: 1239 DQLLQRF 1245
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 ELLQQFA 8
EL+Q+FA
Sbjct: 6610 ELIQRFA 6616
>sp|NS1_I00A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Duck/Hong
Query: 2 ELLQQFA 8
E+LQ+FA
Sbjct: 191 EILQRFA 197
185|Sequence|921|930|QFASFGEVIL
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 3 ASFGEVI 9
A+FGE++
Sbjct: 2206 AAFGEIV 2212
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 SFGEVI 9
SFGE++
Sbjct: 601 SFGEIV 606
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 SFGEVI 9
SFGE++
Sbjct: 601 SFGEIV 606
186|Sequence|926|935|GEVILIRFVE
>sp|VP7_ROTHT|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 3 VILIRFV 9
V+LIRFV
Sbjct: 139 VVLIRFV 145
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 1 GEVILIRF 8
GE + IRF
Sbjct: 27 GETVFIRF 34
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 GEVILIRF 8
GE + IRF
Sbjct: 27 GETVFIRF 34
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GEVILIRF 8
GE + IRF
Sbjct: 27 GETVFIRF 34
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 GEVILIRF 8
GE + IRF
Sbjct: 27 GETVFIRF 34
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 1 GEVILIRF 8
GE + IRF
Sbjct: 27 GETVFIRF 34
187|Sequence|931|940|IRFVEDKMWV
>sp|BET_FOAMV|PROTEIN Bet|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 RFVEDKMWV 10
RF+E + WV
Sbjct: 181 RFMETQFWV 189
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 IRFVEDKM 8
+++VEDK+
Sbjct: 694 VKYVEDKV 701
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 IRFVEDKM 8
+++VEDK+
Sbjct: 694 VKYVEDKV 701
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 IRFVEDKM 8
+++VEDK+
Sbjct: 693 VKYVEDKV 700
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 IRFVEDKMW 9
+ + E+K+W
Sbjct: 4532 VTYFENKLW 4540
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 4 VEDKMWV 10
+EDK W+
Sbjct: 201 MEDKAWL 207
>sp|NSP3_ROTH6|NON-STRUCTURAL protein 3|Rotavirus A (strain
Query: 3 FVEDKMWV 10
FVE+KM V
Sbjct: 158 FVEEKMEV 165
>sp|NSP3_ROTH7|NON-STRUCTURAL protein 3|Rotavirus A (isolate RVA/Human/United
Query: 3 FVEDKMWV 10
FVE+KM V
Sbjct: 155 FVEEKMEV 162
>sp|NSP3_ROTH3|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 3 FVEDKMWV 10
FVE+KM V
Sbjct: 158 FVEEKMEV 165
>sp|NSP3_ROT41|NON-STRUCTURAL protein 3|Rotavirus A (isolate
Query: 3 FVEDKMWV 10
FVE+KM V
Sbjct: 158 FVEEKMEV 165
>sp|VE2_HPV36|REGULATORY protein E2|Human papillomavirus 36
Query: 1 IRFVEDKMW 9
+ ++ED +W
Sbjct: 137 VYYMEDDVW 145
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 FVEDKMWV 10
F+E + WV
Sbjct: 2084 FIESEHWV 2091
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 VEDKMWV 10
+EDK W+
Sbjct: 481 MEDKAWL 487
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 VEDKMWV 10
+EDK W+
Sbjct: 201 MEDKAWL 207
188|Sequence|936|945|DKMWVTFLEG
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DKMWVTFLEG 10
DK+WVT G
Sbjct: 31 DKLWVTVYYG 40
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 3 MWVTFLE 9
MW FLE
Sbjct: 318 MWTVFLE 324
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DKMWVTFLEG 10
DK+WVT G
Sbjct: 31 DKLWVTVYYG 40
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DKMWVTFLEG 10
DK+WVT G
Sbjct: 32 DKLWVTVYYG 41
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 3 MWVTFLE 9
+W+TFL+
Sbjct: 228 LWMTFLQ 234
>sp|UL32_HHV7J|PACKAGING protein UL32|Human herpesvirus 7 (strain JI)
Query: 1 DKMWV 5
DKMW+
Sbjct: 88 DKMWI 92
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 VTFLEG 10
VTFLEG
Sbjct: 739 VTFLEG 744
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 VTFLEG 10
VTFLEG
Sbjct: 739 VTFLEG 744
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 DKMWVTFLE 9
+K+W F+E
Sbjct: 4537 NKLWFDFVE 4545
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 DKMWVTFLEG 10
D +W LEG
Sbjct: 327 DDVWAAALEG 336
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 4 WVTFLE 9
W+T+LE
Sbjct: 552 WMTYLE 557
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 4 WVTFLE 9
W+T+LE
Sbjct: 552 WMTYLE 557
>sp|CAPSD_HCYV5|CAPSID protein|Human associated cyclovirus 1 (isolate
Query: 3 MWVTFL 8
MW TF+
Sbjct: 207 MWCTFI 212
>sp|LMP1_EBVG|LATENT membrane protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 MWVTFLE 9
+W+ FLE
Sbjct: 122 LWIYFLE 128
>sp|LMP1_EBVC|LATENT membrane protein 1|Epstein-Barr virus (strain Cao) (HHV-4)
Query: 3 MWVTFLE 9
+W+ FLE
Sbjct: 122 IWIYFLE 128
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 DKMWVTFLEG 10
D W + L+G
Sbjct: 260 DPSWASILQG 269
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 DKMWVTFLEG 10
D W + L+G
Sbjct: 260 DPSWASILQG 269
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 DKMWVTFLEG 10
D W + L+G
Sbjct: 260 DPSWASILQG 269
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 DKMWVTFLEG 10
D W + L+G
Sbjct: 260 DPSWASILQG 269
Query: 2 KMWVTFLE 9
++W TFL+
Sbjct: 1002 ELWNTFLK 1009
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 DKMWVTFLEG 10
D W + L+G
Sbjct: 260 DPSWASILQG 269
Query: 2 KMWVTFLE 9
++W TFL+
Sbjct: 1002 ELWNTFLK 1009
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 DKMWVTFLEG 10
D W + L+G
Sbjct: 260 DPSWASILQG 269
Query: 2 KMWVTFLE 9
++W TFL+
Sbjct: 1002 ELWNTFLK 1009
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 2 KMWVTF 7
+ WVTF
Sbjct: 158 RAWVTF 163
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 2 KMWVTF 7
+ WVTF
Sbjct: 158 RAWVTF 163
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 2 KMWVTF 7
+ WVTF
Sbjct: 158 RAWVTF 163
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 2 KMWVTF 7
+ WVTF
Sbjct: 158 RAWVTF 163
>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 DKMWVTFLEG 10
D W + L+G
Sbjct: 260 DPSWASILQG 269
>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 DKMWVTFLEG 10
D W + L+G
Sbjct: 260 DPSWASILQG 269
>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 DKMWVTFLEG 10
D W + L+G
Sbjct: 260 DPSWASILQG 269
>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 DKMWVTFLEG 10
D W + L+G
Sbjct: 260 DPSWASILQG 269
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 1 DKMWVTFLE 9
DK W F E
Sbjct: 603 DKNWKCFFE 611
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 3 MWVTF 7
+W+TF
Sbjct: 45 LWITF 49
>sp|GAG_XMRV6|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 KMWVTF 7
+ WVTF
Sbjct: 33 RRWVTF 38
>sp|GAG_XMRV4|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 KMWVTF 7
+ WVTF
Sbjct: 33 RRWVTF 38
>sp|GAG_XMRV3|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 KMWVTF 7
+ WVTF
Sbjct: 33 RRWVTF 38
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 1 DKMWVTFLE 9
DK W F E
Sbjct: 599 DKNWKCFFE 607
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 1 DKMWVTFLE 9
DK W F E
Sbjct: 613 DKNWKCFFE 621
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 KMWVTF 7
+ WVTF
Sbjct: 33 RRWVTF 38
>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 1 DKMWVTFLEG 10
D W L+G
Sbjct: 253 DPTWAAILQG 262
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 1 DKMWVTFLEG 10
D W L+G
Sbjct: 253 DPTWAAILQG 262
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 KMWVTF 7
+ WVTF
Sbjct: 33 RRWVTF 38
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 KMWVTF 7
+ WVTF
Sbjct: 33 RRWVTF 38
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 DKMWVTFLEG 10
D W L+G
Sbjct: 253 DPTWAAILQG 262
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 DKMWVTFLEG 10
D W L+G
Sbjct: 253 DPTWAAILQG 262
>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3
Query: 1 DKMWVTFLEG 10
D W L+G
Sbjct: 253 DPTWAAILQG 262
>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3
Query: 1 DKMWVTFLEG 10
D W L+G
Sbjct: 253 DPTWAAILQG 262
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 1 DKMWVTFLE 9
D+ W +F E
Sbjct: 561 DQSWKSFFE 569
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 1 DKMWVTFLE 9
D+ W +F E
Sbjct: 566 DQSWKSFFE 574
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 1 DKMWVTFLE 9
D+ W +F E
Sbjct: 561 DQSWKSFFE 569
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 1 DKMWVTFLE 9
D+ W +F E
Sbjct: 566 DQSWKSFFE 574
>sp|DYR_HHV8P|PUTATIVE Dihydrofolate reductase|Human herpesvirus 8 type P
Query: 1 DKMWV 5
DK+WV
Sbjct: 110 DKVWV 114
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 1 DKMWVTFLE 9
D+ W +F E
Sbjct: 561 DQSWKSFFE 569
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 1 DKMWVTFLE 9
D+ W +F E
Sbjct: 566 DQSWKSFFE 574
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 1 DKMWVTFLE 9
D+ W +F E
Sbjct: 559 DQSWKSFFE 567
189|Sequence|941|950|TFLEGSSALN
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 TFLEGSS 7
TFLEG S
Sbjct: 740 TFLEGDS 746
Query: 1 TFLEGS 6
T+LEGS
Sbjct: 2944 TYLEGS 2949
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 TFLEGSS 7
TFLEG S
Sbjct: 740 TFLEGDS 746
>sp|GAAP_VACCL|GOLGI anti-apoptotic protein|Vaccinia virus (strain Lister) (VACV)
Query: 1 TFLEGSSAL 9
TF++GS L
Sbjct: 63 TFIQGSPVL 71
>sp|GAAP_VACC8|GOLGI anti-apoptotic protein|Vaccinia virus (strain LC16m8) (VACV)
Query: 1 TFLEGSSAL 9
TF++GS L
Sbjct: 63 TFIQGSPVL 71
>sp|GAAP_VACC0|GOLGI anti-apoptotic protein|Vaccinia virus (strain LC16m0) (VACV)
Query: 1 TFLEGSSAL 9
TF++GS L
Sbjct: 63 TFIQGSPVL 71
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 TFLEGS 6
T+LEGS
Sbjct: 2967 TYLEGS 2972
190|Sequence|946|955|SSALNVLSLN
***** No hits found ******
191|Sequence|951|960|VLSLNGKELL
>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VLSLNGKELL 10
VLS GKE+L
Sbjct: 48 VLSYRGKEIL 57
>sp|PG086_VACCT|ENTRY-FUSION complex protein OPG086|Vaccinia virus (strain Tian Tan)
Query: 1 VLSLNGKE 8
++SLNGK+
Sbjct: 82 IMSLNGKK 89
>sp|PG086_VACCC|ENTRY-FUSION complex protein OPG086|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VLSLNGKE 8
++SLNGK+
Sbjct: 82 IMSLNGKK 89
>sp|PG086_VARV|ENTRY-FUSION complex protein OPG086|Variola virus
Query: 1 VLSLNGKE 8
++SLNGK+
Sbjct: 82 IMSLNGKK 89
>sp|PG086_VAR67|ENTRY-FUSION complex protein OPG086|Variola virus (isolate
Query: 1 VLSLNGKE 8
++SLNGK+
Sbjct: 82 IMSLNGKK 89
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 LSLNGKELL 10
L LNG E+L
Sbjct: 2094 LKLNGPEIL 2102
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 LSLNGKELL 10
L +NG E+L
Sbjct: 2094 LKMNGPEIL 2102
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 LSLNGKELL 10
++ NG ELL
Sbjct: 699 VNFNGSELL 707
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LSLNGKELL 10
++ NG ELL
Sbjct: 699 VNFNGSELL 707
>sp|NCAP_INCCA|NUCLEOPROTEIN C virus (strain C/California/1978)
Query: 2 LSLNGKELL 10
+ LNG E+L
Sbjct: 36 VGLNGDEML 44
>sp|NCAP_INCAA|NUCLEOPROTEIN C virus (strain C/Ann
Query: 2 LSLNGKELL 10
+ LNG E+L
Sbjct: 36 VGLNGDEML 44
>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)
Query: 2 LSLNGKELL 10
+ LNG E+L
Sbjct: 36 VGLNGDEML 44
192|Sequence|956|965|GKELLNRTIT
>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)
Query: 3 ELLNRTIT 10
EL+NRT T
Sbjct: 510 ELINRTRT 517
>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)
Query: 3 ELLNRTIT 10
EL+NRT T
Sbjct: 505 ELINRTRT 512
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 3 ELLNRTI 9
+LLNRTI
Sbjct: 98 QLLNRTI 104
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 3 ELLNRTI 9
+LLNRTI
Sbjct: 98 QLLNRTI 104
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 GKELLNR 7
GK LLN+
Sbjct: 865 GKHLLNK 871
193|Sequence|961|970|NRTITIALKS
***** No hits found ******
194|Sequence|966|975|IALKSPDWIK
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 SPDWIK 10
SP+W+K
Sbjct: 578 SPEWVK 583
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 SPDWIK 10
SP+W+K
Sbjct: 578 SPEWVK 583
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 5 SPDWIK 10
SPDW++
Sbjct: 1346 SPDWLE 1351
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 4 KSPDWI 9
K PDWI
Sbjct: 289 KYPDWI 294
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 IALKSPDWI 9
IAL++P WI
Sbjct: 52 IALETPVWI 60
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 4 KSPDWI 9
++PDWI
Sbjct: 283 QTPDWI 288
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 4 KSPDWI 9
++PDWI
Sbjct: 284 QTPDWI 289
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 IALKSPDWI 9
IAL++P WI
Sbjct: 52 IALETPVWI 60
>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 IALKSPDWI 9
IAL++P WI
Sbjct: 52 IALETPVWI 60
>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 IALKSPDWI 9
IAL++P WI
Sbjct: 52 IALETPVWI 60
>sp|VP2_POVK6|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 60)
Query: 5 SPDWI 9
+PDWI
Sbjct: 325 TPDWI 329
>sp|VP2_POVK3|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 380)
Query: 5 SPDWI 9
+PDWI
Sbjct: 325 TPDWI 329
>sp|VP2_POVWU|MINOR capsid protein VP2|WU polyomavirus (WUPyV)
Query: 5 SPDWI 9
+PDWI
Sbjct: 336 APDWI 340
Query: 6 PDWI 9
PDW+
Sbjct: 162 PDWV 165
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 4 KSPDWI 9
++PDWI
Sbjct: 289 EAPDWI 294
>sp|VP2_POVKI|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 350)
Query: 5 SPDWI 9
+PDWI
Sbjct: 325 TPDWI 329
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 5 SPDWI 9
+PDWI
Sbjct: 839 TPDWI 843
>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2
Query: 1 IALKSPDWI 9
+ALK+P W+
Sbjct: 52 LALKTPIWL 60
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 1 IALKSPDWI 9
+ALK+P W+
Sbjct: 52 LALKTPIWL 60
>sp|U91_HHV6Z|PROTEIN U91|Human herpesvirus 6B (strain Z29)
Query: 4 KSPDWIK 10
KSP W++
Sbjct: 91 KSPSWVQ 97
>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2
Query: 1 IALKSPDWI 9
+ALK+P W+
Sbjct: 52 LALKTPIWL 60
>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IALKSPDWIK 10
I K P+W +
Sbjct: 325 ITRKQPEWFR 334
>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IALKSPDWIK 10
I K P+W +
Sbjct: 325 ITRKQPEWFR 334
>sp|RDRP_I01A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IALKSPDWIK 10
I K P+W +
Sbjct: 325 ITRKQPEWFR 334
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 6 PDWIK 10
PDW+K
Sbjct: 913 PDWLK 917
>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 1 IALKSPDWIK 10
I PDW +
Sbjct: 325 ITRNQPDWFR 334
>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IALKSPDWIK 10
I PDW +
Sbjct: 325 ITRNQPDWFR 334
>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IALKSPDWIK 10
I PDW +
Sbjct: 325 ITRNQPDWFR 334
>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Guinea
Query: 1 IALKSPDWIK 10
I PDW +
Sbjct: 325 ITRNQPDWFR 334
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 5 SPDWI 9
+PDW+
Sbjct: 830 TPDWV 834
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 6 PDWI 9
PDWI
Sbjct: 291 PDWI 294
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 6 PDWI 9
PDWI
Sbjct: 290 PDWI 293
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 6 PDWI 9
PDWI
Sbjct: 291 PDWI 294
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 6 PDWI 9
PDWI
Sbjct: 291 PDWI 294
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 6 PDWI 9
PDWI
Sbjct: 290 PDWI 293
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 6 PDWI 9
PDW+
Sbjct: 153 PDWV 156
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 6 PDWI 9
PDW+
Sbjct: 153 PDWV 156
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 6 PDWI 9
PDWI
Sbjct: 291 PDWI 294
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 6 PDWI 9
PDWI
Sbjct: 295 PDWI 298
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 IALKSPDWI 9
+A+K+P W+
Sbjct: 52 LAIKTPVWL 60
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 6 PDWI 9
PDWI
Sbjct: 293 PDWI 296
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 4 KSPDWIK 10
K PD+IK
Sbjct: 231 KYPDYIK 237
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 6 PDWI 9
PDWI
Sbjct: 293 PDWI 296
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 IALKSPDWI 9
+A+K+P W+
Sbjct: 52 LAIKTPVWL 60
>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3
Query: 1 IALKSPDWI 9
+A+K+P W+
Sbjct: 52 LAIKTPVWL 60
>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 1 IALKSPDWI 9
+A+K+P W+
Sbjct: 52 LAIKTPVWL 60
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 4 KSPDWIK 10
+ PDW K
Sbjct: 82 QDPDWSK 88
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 LKSPDWIK 10
+K+P W K
Sbjct: 5472 VKNPSWSK 5479
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 1 IALKSPDWI 9
+A+K+P W+
Sbjct: 52 LAIKTPVWL 60
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 1 IALKSPDWI 9
I + +PDW+
Sbjct: 67 IPVFNPDWL 75
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 4 KSPDWIK 10
K PD+IK
Sbjct: 230 KYPDYIK 236
>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3
Query: 1 IALKSPDWI 9
+A+K+P W+
Sbjct: 52 LAIKTPVWL 60
>sp|US02_HHV11|PROTEIN US2|Human herpesvirus 1 (strain 17)
Query: 1 IALKSPD-WI 9
IA+K+PD W+
Sbjct: 150 IAIKTPDAWV 159
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 IALKSPDWI 9
+ALK W+
Sbjct: 815 VALKRSSWL 823
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 ALKSPDWIK 10
A+KSPD K
Sbjct: 602 AIKSPDPTK 610
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LKSPDW 8
LKS DW
Sbjct: 2207 LKSYDW 2212
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LKSPDW 8
LKS DW
Sbjct: 2207 LKSYDW 2212
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LKSPDW 8
LKS DW
Sbjct: 2207 LKSYDW 2212
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LKSPDW 8
LKS DW
Sbjct: 2207 LKSYDW 2212
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LKSPDW 8
LKS DW
Sbjct: 2207 LKSYDW 2212
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LKSPDW 8
LKS DW
Sbjct: 2205 LKSYDW 2210
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LKSPDW 8
LKS DW
Sbjct: 2207 LKSYDW 2212
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 KSPDWI 9
KSPD++
Sbjct: 2302 KSPDYV 2307
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LKSPDW 8
LKS DW
Sbjct: 2208 LKSYDW 2213
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 LKSPDW 8
LKS DW
Sbjct: 2208 LKSYDW 2213
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 5 SPDWIK 10
SP W+K
Sbjct: 254 SPQWLK 259
195|Sequence|971|980|PDWIKNLEEE
>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)
Query: 3 WIKNLE 8
WIKNLE
Sbjct: 182 WIKNLE 187
>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)
Query: 3 WIKNLE 8
WIKNLE
Sbjct: 182 WIKNLE 187
>sp|PG056_VACCC|PROTEIN OPG056|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 WIKNLE 8
WIKNLE
Sbjct: 182 WIKNLE 187
>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 WIKNLE 8
WIKNLE
Sbjct: 182 WIKNLE 187
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 WIKNLE 8
WIKNLE
Sbjct: 182 WIKNLE 187
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 PDWIKN 6
P+W+KN
Sbjct: 411 PNWVKN 416
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 DWIKNLEEE 10
DW KN+ +E
Sbjct: 615 DWTKNITDE 623
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 DWIKNLEEE 10
DW KN+ +E
Sbjct: 615 DWTKNITDE 623
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 2 DWIKNLEEE 10
DW KN+ +E
Sbjct: 615 DWTKNITDE 623
>sp|UL142_HCMVM|MEMBRANE glycoprotein UL142|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 WIKNLEE 9
WIK+L+E
Sbjct: 118 WIKSLQE 124
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 3 WIKNLE 8
W+KNLE
Sbjct: 2193 WMKNLE 2198
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 DWIKNLEEE 10
DW+ LE+E
Sbjct: 1087 DWLALLEDE 1095
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 2 DWIKNLEEE 10
DW+ LE+E
Sbjct: 1087 DWLALLEDE 1095
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 2 DWIKNLEEE 10
DW+ LE+E
Sbjct: 1087 DWLALLEDE 1095
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 2 DWIKNLEEE 10
DW+ LE+E
Sbjct: 1087 DWLALLEDE 1095
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 DWIKNLEEE 10
DW+ LE+E
Sbjct: 1087 DWLALLEDE 1095
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 DWIKNLEEE 10
DW KN+ ++
Sbjct: 614 DWTKNITDK 622
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 DWIKNLEEE 10
DW KN+ ++
Sbjct: 614 DWTKNITDK 622
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 2 DWIKNLEEE 10
DW KN+ ++
Sbjct: 614 DWTKNITDK 622
>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 IKNLEE 9
IKNLEE
Sbjct: 378 IKNLEE 383
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 DWIKNLEEE 10
DW KN+ ++
Sbjct: 614 DWTKNITDK 622
>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)
Query: 4 IKNLEE 9
IKNLEE
Sbjct: 378 IKNLEE 383
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 3 WIKNLEE 9
WI LEE
Sbjct: 2562 WIHGLEE 2568
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 3 WIKNLEE 9
WI LEE
Sbjct: 2575 WIHGLEE 2581
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 2 DWIKNLEEE 10
DW KN+ ++
Sbjct: 614 DWTKNITDK 622
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 DWIKNLEEE 10
DW KN+ ++
Sbjct: 614 DWTKNITDK 622
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 4 IKNLEEE 10
IKNLEE+
Sbjct: 378 IKNLEED 384
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 DWIKNLEEE 10
DW KN+ ++
Sbjct: 614 DWTKNITDK 622
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 DWIKNLEEE 10
DW KN+ ++
Sbjct: 614 DWTKNITDK 622
>sp|NCAP_ANDV|NUCLEOPROTEIN orthohantavirus (ANDV) (Andes virus)
Query: 2 DWIKNLEE 9
DW+ +EE
Sbjct: 231 DWMDRIEE 238
>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41
Query: 1 PDWIKNLEE 9
PD+++ +EE
Sbjct: 259 PDYLQMIEE 267
>sp|PG085_YLDV|PROBABLE metalloendopeptidase G1-type|Yaba-like disease virus (YLDV)
Query: 5 KNLEEE 10
KNLEE+
Sbjct: 321 KNLEED 326
196|Sequence|976|985|NLEEEMSLEK
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 EEMSLEK 10
EEM+LEK
Sbjct: 207 EEMTLEK 213
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 EEMSLEK 10
EEM+LEK
Sbjct: 207 EEMTLEK 213
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 EEMSLEK 10
EEM+LEK
Sbjct: 207 EEMTLEK 213
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 NLEEEMSL 8
NLEEE+ L
Sbjct: 3706 NLEEEILL 3713
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 NLEEEMSL 8
NLEEE+ L
Sbjct: 3706 NLEEEILL 3713
>sp|PG087_VARV|LATE transcription elongation factor OPG087|Variola virus
Query: 1 NLEEEMSLE 9
+L EE+S+E
Sbjct: 61 DLSEELSME 69
>sp|PG087_VAR67|LATE transcription elongation factor OPG087|Variola virus (isolate
Query: 1 NLEEEMSLE 9
+L EE+S+E
Sbjct: 61 DLSEELSME 69
>sp|VU25_HHV7J|PROTEIN U25|Human herpesvirus 7 (strain JI)
Query: 1 NLEEEMS 7
N+EEE+S
Sbjct: 275 NVEEELS 281
197|Sequence|981|990|MSLEKISIAL
***** No hits found ******
198|Sequence|986|995|ISIALPSSTS
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 ISIALPSSTS 10
ISI LP+ T+
Sbjct: 574 ISIPLPNGTA 583
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 1 ISIALPSSTS 10
ISI LP+ T+
Sbjct: 574 ISIPLPNGTA 583
>sp|VL2_HPV39|MINOR capsid protein L2|Human papillomavirus 39
Query: 3 IALPSST 9
IALPS+T
Sbjct: 413 IALPSTT 419
199|Sequence|991|1000|PSSTSSTLLG
>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30
Query: 1 PSSTSSTL 8
P S SSTL
Sbjct: 196 PDSVSSTL 203
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 PSSTSSTLL 9
P STS+TLL
Sbjct: 1798 PLSTSTTLL 1806
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 PSSTSSTLL 9
P STS+TLL
Sbjct: 1802 PLSTSTTLL 1810
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 PSSTSSTLL 9
PS S TLL
Sbjct: 2661 PSEASDTLL 2669
200|Sequence|996|1005|STLLGEDAEV
>sp|US30_HCMVM|UNCHARACTERIZED protein US30|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 STLLGEDAEV 10
ST LG++AEV
Sbjct: 197 STPLGKNAEV 206
>sp|US30_HCMVA|UNCHARACTERIZED protein HHRF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 STLLGEDAEV 10
ST LG++AEV
Sbjct: 197 STPLGKNAEV 206
>sp|E1A_ADE07|EARLY E1A protein|Human adenovirus B serotype 7
Query: 1 STLLGEDAE 9
+TL+G+D E
Sbjct: 26 NTLMGDDPE 34
>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)
Query: 1 STLLGEDA 8
STLL ED+
Sbjct: 178 STLLKEDS 185
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 2 TLLGED 7
TLLG+D
Sbjct: 363 TLLGQD 368
>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 2 TLLGEDA 8
T+LG DA
Sbjct: 529 TILGRDA 535
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 2 TLLGEDA 8
T+LG DA
Sbjct: 529 TILGRDA 535
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 TLLGEDA 8
T+LG DA
Sbjct: 529 TILGRDA 535
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 TLLGEDA 8
T+LG DA
Sbjct: 529 TILGRDA 535
>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 STLLGEDAEV 10
ST+ G+D+ V
Sbjct: 697 STIQGQDSPV 706
>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 TLLGEDA 8
T+LG+DA
Sbjct: 666 TILGKDA 672
201|Sequence|1001|1010|EDAEVAADFD
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 EDAEVAADF 9
ED + ADF
Sbjct: 635 EDTDATADF 643
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 EDAEVAADF 9
ED + ADF
Sbjct: 635 EDTDATADF 643
202|Sequence|1006|1015|AADFDMEGDV
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 3 DFDMEGDV 10
D+D+ GD+
Sbjct: 2253 DYDIHGDI 2260
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 3 DFDMEGDV 10
D+D+ GD+
Sbjct: 2253 DYDIHGDI 2260
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 3 DFDMEGDV 10
D+D+ GD+
Sbjct: 2253 DYDIHGDI 2260
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 4 FDMEGD 9
FD+EGD
Sbjct: 400 FDIEGD 405
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 3 DFDMEGD 9
DFD EG+
Sbjct: 307 DFDSEGN 313
>sp|PP71_HCMVM|PROTEIN pp71|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 DMEGDV 10
DM+GDV
Sbjct: 518 DMDGDV 523
>sp|PP71_HCMVA|PROTEIN pp71|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 DMEGDV 10
DM+GDV
Sbjct: 518 DMDGDV 523
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 ADFDMEGD 9
AD D+E D
Sbjct: 544 ADLDIESD 551
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 4 FDMEGD 9
FD EGD
Sbjct: 310 FDTEGD 315
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 3 DFDMEGD 9
D+D+EG+
Sbjct: 1487 DYDIEGE 1493
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 3 DFDMEGD 9
D+D+EG+
Sbjct: 1487 DYDIEGE 1493
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 3 DFDMEGD 9
D+D+EG+
Sbjct: 1487 DYDIEGE 1493
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 3 DFDMEGD 9
D+D+EG+
Sbjct: 1487 DYDIEGE 1493
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 DFDMEGD 9
D+D+EG+
Sbjct: 1487 DYDIEGE 1493
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 3 DFDMEGD 9
D+D+EG+
Sbjct: 1487 DYDIEGE 1493
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 3 DFDMEGD 9
D+D+EG+
Sbjct: 1487 DYDIEGE 1493
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 4 FDMEGD 9
FD EGD
Sbjct: 310 FDTEGD 315
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 ADFDMEGD 9
ADF + GD
Sbjct: 6535 ADFSITGD 6542
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 3 DFDMEGD 9
DF M+GD
Sbjct: 1186 DFCMQGD 1192
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 3 DFDMEGD 9
D+D+EG+
Sbjct: 1487 DYDVEGE 1493
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 DFDMEGD 9
D+D+EG+
Sbjct: 1487 DYDVEGE 1493
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 4 FDMEGDV 10
FD+ GDV
Sbjct: 102 FDVSGDV 108
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 ADFDMEGD 9
ADF + GD
Sbjct: 6564 ADFSVTGD 6571
>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])
Query: 3 DFDMEGDV 10
DF+M G +
Sbjct: 514 DFEMNGSI 521
>sp|PG132_MONPV|VIRION morphogenesis protein OPG132|Monkeypox virus (MPXV)
Query: 1 AADFDMEGDV 10
A+D DM+ D+
Sbjct: 27 ASDVDMDFDL 36
>sp|PG132_VARV|VIRION morphogenesis protein OPG132|Variola virus
Query: 1 AADFDMEGDV 10
A+D DM+ D+
Sbjct: 27 ASDVDMDFDL 36
>sp|PG132_VAR67|VIRION morphogenesis protein OPG132|Variola virus (isolate
Query: 1 AADFDMEGDV 10
A+D DM+ D+
Sbjct: 27 ASDVDMDFDL 36
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 3 DFDMEGD 9
+FD+EG+
Sbjct: 8 NFDLEGN 14
>sp|PG132_VACCC|VIRION morphogenesis protein OPG132|Vaccinia virus (strain Copenhagen)
Query: 1 AADFDMEGDV 10
A+D DM+ D+
Sbjct: 27 ASDVDMDFDL 36
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 DFDMEGDV 10
++D +GDV
Sbjct: 161 EYDRDGDV 168
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 3 DFDMEGD 9
++D EGD
Sbjct: 686 EYDSEGD 692
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 DFDMEGDV 10
++D +GDV
Sbjct: 161 EYDRDGDV 168
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 DFDMEGDV 10
++D +GDV
Sbjct: 161 EYDRDGDV 168
203|Sequence|1011|1020|MEGDVDDYSA
>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1
Query: 1 MEGDVDDYSA 10
M G+ +DYSA
Sbjct: 574 MRGEREDYSA 583
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 MEGDVD 6
MEGD+D
Sbjct: 1972 MEGDLD 1977
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 EGDVDDYSA 10
E DV+ YS+
Sbjct: 2392 ESDVESYSS 2400
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 EGDVDDYSA 10
E DV+ YS+
Sbjct: 2379 ESDVESYSS 2387
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 DVDDY 8
DVDDY
Sbjct: 5413 DVDDY 5417
>sp|E3GL_ADE06|EARLY E3 18.5 kDa glycoprotein|Human adenovirus C serotype 6
Query: 3 GDVDDYS 9
GD +DY+
Sbjct: 72 GDTNDYN 78
>sp|E3GL_ADE02|EARLY E3 18.5 kDa glycoprotein|Human adenovirus C serotype 2
Query: 3 GDVDDYS 9
GD +DY+
Sbjct: 72 GDTNDYN 78
>sp|VE2_HPV37|REGULATORY protein E2|Human papillomavirus 37
Query: 1 MEGDVDDYSA 10
+EG VD Y A
Sbjct: 149 VEGHVDYYGA 158
204|Sequence|1016|1025|DDYSAEVEEL
>sp|G7_VACCC|ASSEMBLY protein G7|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 DYSAEVEEL 10
DYSAEVE L
Sbjct: 196 DYSAEVERL 204
>sp|G7_VACCA|ASSEMBLY protein G7|Vaccinia virus (strain Ankara) (VACV)
Query: 2 DYSAEVEEL 10
DYSAEVE L
Sbjct: 196 DYSAEVERL 204
>sp|G7_VARV|ASSEMBLY protein G7|Variola virus
Query: 2 DYSAEVEEL 10
+YSAEVE L
Sbjct: 196 NYSAEVERL 204
>sp|G7_VAR67|ASSEMBLY protein G7|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 DYSAEVEEL 10
+YSAEVE L
Sbjct: 196 NYSAEVERL 204
>sp|E1BS_ADE05|E1B protein, small T-antigen|Human adenovirus C serotype 5
Query: 1 DDYSAEVEEL 10
+DY E EEL
Sbjct: 45 EDYKWEFEEL 54
>sp|E1BS_ADE02|E1B protein, small T-antigen|Human adenovirus C serotype 2
Query: 1 DDYSAEVEEL 10
+DY E EEL
Sbjct: 45 EDYKWEFEEL 54
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 DDYSAEVEEL 10
++YSAEV L
Sbjct: 2915 EEYSAEVSRL 2924
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 DDYSAEVEEL 10
++YSAEV L
Sbjct: 3003 EEYSAEVSRL 3012
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 3 YSAEVEEL 10
++AEVEE+
Sbjct: 1989 WAAEVEEM 1996
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 DDYSAEVEE 9
DDY VE+
Sbjct: 188 DDYDFSVED 196
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 DDYSAEVEE 9
DDY VE+
Sbjct: 188 DDYDFSVED 196
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 DYSAEVEE 9
D+SA +EE
Sbjct: 976 DFSATLEE 983
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 DDYSAEVEE 9
DDY VE+
Sbjct: 188 DDYDFSVED 196
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 DYSAEVEE 9
D+SA +EE
Sbjct: 976 DFSATLEE 983
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 DYSAEVEE 9
D+SA +EE
Sbjct: 975 DFSATLEE 982
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 DDYSAEVEE 9
DDY VE+
Sbjct: 188 DDYDFSVED 196
205|Sequence|1021|1030|EVEELLPQHL
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 3 EELLPQHL 10
EEL P HL
Sbjct: 472 EELRPDHL 479
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 3 EELLPQHL 10
EEL P HL
Sbjct: 471 EELRPDHL 478
>sp|BET_FOAMV|PROTEIN Bet|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 EVEELLPQHL 10
E+E+ PQH+
Sbjct: 67 EIEDKHPQHI 76
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 EELLPQ 8
EE+LPQ
Sbjct: 649 EEMLPQ 654
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 ELLPQHL 10
+LLPQH+
Sbjct: 692 DLLPQHV 698
>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7
Query: 3 EELLPQHL 10
E+L P HL
Sbjct: 468 EDLRPDHL 475
>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 EVEELLPQHL 10
E+E+ PQH+
Sbjct: 67 EIEDKHPQHI 76
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 EVEELLP 7
EV+EL+P
Sbjct: 2885 EVDELMP 2891
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 EVEELLP 7
EV+EL+P
Sbjct: 2973 EVDELMP 2979
>sp|KITH_HHV2H|THYMIDINE kinase|Human herpesvirus 2 (strain HG52)
Query: 3 EELLPQHL 10
+ LLP HL
Sbjct: 318 DRLLPMHL 325
>sp|KITH_HHV23|THYMIDINE kinase|Human herpesvirus 2 (strain 333)
Query: 3 EELLPQHL 10
+ LLP HL
Sbjct: 318 DRLLPMHL 325
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 1 EVEELLPQ 8
++EEL+P+
Sbjct: 305 KLEELIPE 312
>sp|TRX2_VZVD|TRIPLEX capsid protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 EVEELLPQHL 10
E+E LLP L
Sbjct: 6 EIEVLLPGEL 15
206|Sequence|1026|1035|LPQHLQPSSS
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 LPQHLQPSSS 10
LP+H +P S+
Sbjct: 1595 LPRHAKPGST 1604
>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27
Query: 3 QHLQPSSS 10
QHL+P S+
Sbjct: 266 QHLRPDST 273
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 LPQHLQPSSS 10
LP+H QP +
Sbjct: 1585 LPRHSQPGKT 1594
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 LPQHLQPSSS 10
LP+H QP +
Sbjct: 1585 LPRHSQPGKT 1594
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 LPQHL 5
LPQHL
Sbjct: 2106 LPQHL 2110
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 LPQHL 5
LPQHL
Sbjct: 2107 LPQHL 2111
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 LPQHL 5
LPQHL
Sbjct: 2107 LPQHL 2111
>sp|UL20_HHV11|PROTEIN UL20|Human herpesvirus 1 (strain 17)
Query: 1 LPQHLQP 7
LP H QP
Sbjct: 52 LPPHTQP 58
>sp|UL20_HHV2H|PROTEIN UL20|Human herpesvirus 2 (strain HG52)
Query: 1 LPQHLQP 7
LP H QP
Sbjct: 52 LPPHTQP 58
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 LPQHLQPSSS 10
LP+H QP +
Sbjct: 1585 LPRHSQPGKT 1594
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 LPQHLQPSSS 10
LP+H QP +
Sbjct: 1585 LPRHSQPGKT 1594
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 LPQHLQPSSS 10
LP+H QP +
Sbjct: 1585 LPRHSQPGKT 1594
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 LPQHLQPSSS 10
LP H QP +
Sbjct: 1573 LPTHAQPGDN 1582
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LPQHLQPSSS 10
LP H PS++
Sbjct: 183 LPNHGNPSTA 192
207|Sequence|1031|1040|QPSSSSGLGT
>sp|UL78_HCMVM|PROTEIN UL78|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QPSSSSGLG 9
QP+S++G G
Sbjct: 261 QPASAAGTG 269
>sp|UL78_HCMVA|UNCHARACTERIZED protein UL78|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QPSSSSGLG 9
QP+S++G G
Sbjct: 261 QPASAAGTG 269
>sp|M1_I60A0|MATRIX protein 1|Influenza A virus (strain A/Ann
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I89A2|MATRIX protein 1|Influenza A virus (strain A/Beijing/353/1989
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSTGL 229
>sp|M1_I71A1|MATRIX protein 1|Influenza A virus (strain A/Memphis/1/1971
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I88A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/8/1988
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I83A8|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I82A7|MATRIX protein 1|Influenza A virus (strain A/Swine/Hong
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I78A8|MATRIX protein 1|Influenza A virus (strain A/Memphis/18/1978
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I78A7|MATRIX protein 1|Influenza A virus (strain A/Memphis/2/1978
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I78A3|MATRIX protein 1|Influenza A virus (strain A/Mallard/New
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I77A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I76A6|MATRIX protein 1|Influenza A virus (strain A/Memphis/110/1976
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I75A0|MATRIX protein 1|Influenza A virus (strain A/Beijing/39/1975
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I73A5|MATRIX protein 1|Influenza A virus (strain A/Port
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I72A8|MATRIX protein 1|Influenza A virus (strain A/Udorn/1972
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I72A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/101/1972
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I72A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/102/1972
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I72A2|MATRIX protein 1|Influenza A virus (strain A/Udorn/307/1972
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I70A0|MATRIX protein 1|Influenza A virus (strain A/Qu/7/1970
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I57A0|MATRIX protein 1|Influenza A virus (strain A/Japan/305/1957
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I35A3|MATRIX protein 1|Influenza A virus (strain A/USA:Phila/1935
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I33A0|MATRIX protein 1|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I80A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/4/1980
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I79A0|MATRIX protein 1|Influenza A virus (strain A/Bangkok/1/1979
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I69A0|MATRIX protein 1|Influenza A virus (strain A/England/878/1969
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I68A4|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I67A0|MATRIX protein 1|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSTGL 229
>sp|M1_I51A0|MATRIX protein 1|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I85A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Netherlands/12/1985
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I45A0|MATRIX protein 1|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I43A0|MATRIX protein 1|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I40A0|MATRIX protein 1|Influenza A virus (strain A/Hickox/1940
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I85A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I80A2|MATRIX protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I77AA|MATRIX protein 1|Influenza A virus (strain A/Brazil/11/1978
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSTGL 229
>sp|M1_I57A3|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I57A2|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I57A1|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I54A2|MATRIX protein 1|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I18A0|MATRIX protein 1|Influenza A virus (strain A/Brevig
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I000X|MATRIX protein 1|Influenza A virus (strain A/X-31
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I000F|MATRIX protein 1|Influenza A virus (strain A/Chicken/Weybridge
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I83A1|MATRIX protein 1|Influenza A virus (strain A/Chile/1/1983
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSTGL 229
>sp|M1_I77AC|MATRIX protein 1|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I77AB|MATRIX protein 1|Influenza A virus (strain A/USSR/90/1977
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I82A9|MATRIX protein 1|Influenza A virus (strain A/Philippines/2/1982
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I61A1|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I88A7|MATRIX protein 1|Influenza A virus (strain A/Wisconsin/3523/1988
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I67A2|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I37A0|MATRIX protein 1|Influenza A virus (strain A/Swine/29/1937
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I97A1|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I97A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I34A1|MATRIX protein 1|Influenza A virus (strain A/Puerto
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I07A0|MATRIX protein 1|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 219 HPSSSTGL 226
>sp|M1_I06A0|MATRIX protein 1|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I02A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I96A2|MATRIX protein 1|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSTGL 229
>sp|M1_I88A5|MATRIX protein 1|Influenza A virus (strain A/Swine/Iowa/17672/1988
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I00A1|MATRIX protein 1|Influenza A virus (strain A/New
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSTGL 229
>sp|M1_I81A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Ontario/2/1981
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I77A9|MATRIX protein 1|Influenza A virus (strain A/Equine/New
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I59A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I54A1|MATRIX protein 1|Influenza A virus (strain A/Swine/May/1954
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I36A0|MATRIX protein 1|Influenza A virus (strain A/Henry/1936
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I68A5|MATRIX protein 1|Influenza A virus (strain A/Korea/426/1968
Query: 2 PSSSSGL 8
PSSS+GL
Sbjct: 223 PSSSAGL 229
>sp|M1_I96A3|MATRIX protein 1|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSTGL 229
>sp|M1_I80AA|MATRIX protein 1|Influenza A virus (strain A/India/6263/1980
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I02A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I96A0|MATRIX protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|M1_I01A0|MATRIX protein 1|Influenza A virus (strain A/Silky
Query: 1 QPSSSSGL 8
PSSS+GL
Sbjct: 222 HPSSSAGL 229
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 QPSSSSGL 8
+PSS SG+
Sbjct: 769 EPSSLSGM 776
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 QPSSSSGL 8
+PSS SG+
Sbjct: 769 EPSSLSGM 776
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 SSSSGLGT 10
+SSSG+GT
Sbjct: 2370 TSSSGVGT 2377
208|Sequence|1036|1045|SGLGTSPSSS
>sp|VP7_ROTHE|OUTER capsid glycoprotein VP7|Rotavirus C (isolate
Query: 1 SGLGTSPSSS 10
+G+G SP+S+
Sbjct: 208 NGIGCSPAST 217
>sp|VP7_ROTHC|OUTER capsid glycoprotein VP7|Rotavirus C (isolate RVC/Human/United
Query: 1 SGLGTSPSSS 10
+G+G SP+S+
Sbjct: 208 NGIGCSPAST 217
>sp|V55A_HHV7J|UNCHARACTERIZED protein U55A|Human herpesvirus 7 (strain JI)
Query: 2 GLGTSP 7
GLGT+P
Sbjct: 125 GLGTTP 130
>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SGLGTSPSS 9
SGLGT+P +
Sbjct: 394 SGLGTAPKT 402
>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 1 SGLGTSPSS 9
SGLGT+P +
Sbjct: 394 SGLGTAPKT 402
>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SGLGTSPSS 9
SGLGT+P +
Sbjct: 394 SGLGTAPKT 402
>sp|GP350_EBVB9|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SGLGTSPSS 9
SGLGT+P +
Sbjct: 394 SGLGTAPKT 402
>sp|M1_I71A1|MATRIX protein 1|Influenza A virus (strain A/Memphis/1/1971
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I57A0|MATRIX protein 1|Influenza A virus (strain A/Japan/305/1957
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I78A8|MATRIX protein 1|Influenza A virus (strain A/Memphis/18/1978
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I76A6|MATRIX protein 1|Influenza A virus (strain A/Memphis/110/1976
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I75A0|MATRIX protein 1|Influenza A virus (strain A/Beijing/39/1975
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I73A5|MATRIX protein 1|Influenza A virus (strain A/Port
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I72A8|MATRIX protein 1|Influenza A virus (strain A/Udorn/1972
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I72A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/101/1972
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I72A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/102/1972
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I72A2|MATRIX protein 1|Influenza A virus (strain A/Udorn/307/1972
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I70A0|MATRIX protein 1|Influenza A virus (strain A/Qu/7/1970
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I60A0|MATRIX protein 1|Influenza A virus (strain A/Ann
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I78A7|MATRIX protein 1|Influenza A virus (strain A/Memphis/2/1978
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I88A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/8/1988
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I83A8|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I80A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/4/1980
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I77A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I69A0|MATRIX protein 1|Influenza A virus (strain A/England/878/1969
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I68A4|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I51A0|MATRIX protein 1|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I82A7|MATRIX protein 1|Influenza A virus (strain A/Swine/Hong
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I89A2|MATRIX protein 1|Influenza A virus (strain A/Beijing/353/1989
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I79A0|MATRIX protein 1|Influenza A virus (strain A/Bangkok/1/1979
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I78A3|MATRIX protein 1|Influenza A virus (strain A/Mallard/New
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I68A5|MATRIX protein 1|Influenza A virus (strain A/Korea/426/1968
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTPPSSS 226
>sp|M1_I43A0|MATRIX protein 1|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I40A0|MATRIX protein 1|Influenza A virus (strain A/Hickox/1940
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I33A0|MATRIX protein 1|Influenza A virus (strain A/Wilson-Smith/1933
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I57A1|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I54A2|MATRIX protein 1|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I77AB|MATRIX protein 1|Influenza A virus (strain A/USSR/90/1977
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I67A0|MATRIX protein 1|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I57A3|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I57A2|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I45A0|MATRIX protein 1|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I35A3|MATRIX protein 1|Influenza A virus (strain A/USA:Phila/1935
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I82A9|MATRIX protein 1|Influenza A virus (strain A/Philippines/2/1982
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I18A0|MATRIX protein 1|Influenza A virus (strain A/Brevig
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I85A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Netherlands/12/1985
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I77AC|MATRIX protein 1|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I77AA|MATRIX protein 1|Influenza A virus (strain A/Brazil/11/1978
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I83A1|MATRIX protein 1|Influenza A virus (strain A/Chile/1/1983
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I97A1|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I97A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I88A7|MATRIX protein 1|Influenza A virus (strain A/Wisconsin/3523/1988
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I85A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I80A2|MATRIX protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I67A2|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I61A1|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I37A0|MATRIX protein 1|Influenza A virus (strain A/Swine/29/1937
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I02A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I000X|MATRIX protein 1|Influenza A virus (strain A/X-31
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I88A5|MATRIX protein 1|Influenza A virus (strain A/Swine/Iowa/17672/1988
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I54A1|MATRIX protein 1|Influenza A virus (strain A/Swine/May/1954
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 2 GLGTSPSSS 10
GLG PS S
Sbjct: 293 GLGKLPSES 301
>sp|M1_I81A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Ontario/2/1981
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I77A9|MATRIX protein 1|Influenza A virus (strain A/Equine/New
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I59A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I34A1|MATRIX protein 1|Influenza A virus (strain A/Puerto
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I06A0|MATRIX protein 1|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I07A0|MATRIX protein 1|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 215 AIGTHPSSS 223
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 1 SGLGTSPSSS 10
S LGTSP S+
Sbjct: 465 SKLGTSPGSA 474
>sp|M1_I80AA|MATRIX protein 1|Influenza A virus (strain A/India/6263/1980
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I36A0|MATRIX protein 1|Influenza A virus (strain A/Henry/1936
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I02A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I96A0|MATRIX protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I96A3|MATRIX protein 1|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I96A2|MATRIX protein 1|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I00A1|MATRIX protein 1|Influenza A virus (strain A/New
Query: 2 GLGTSPSSS 10
+GT PSSS
Sbjct: 218 AIGTHPSSS 226
>sp|M1_I01A0|MATRIX protein 1|Influenza A virus (strain A/Silky
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 IGTHPSSS 226
>sp|M1_I000F|MATRIX protein 1|Influenza A virus (strain A/Chicken/Weybridge
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 219 VGTHPSSS 226
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 1 SGLGTSP 7
SG GTSP
Sbjct: 159 SGYGTSP 165
>sp|M1_I82A2|MATRIX protein 1|Influenza A virus (strain A/Camel/Mongolia/1982
Query: 3 LGTSPSSS 10
+GT PSSS
Sbjct: 76 IGTHPSSS 83
209|Sequence|1041|1050|SPSSSPRTSP
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 PSSSPRTSP 10
PSSSP+ +P
Sbjct: 277 PSSSPKKTP 285
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 PSSSPRTSP 10
PSSSP+ +P
Sbjct: 277 PSSSPKKTP 285
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 PSSSPRTSP 10
PSSSP+ +P
Sbjct: 277 PSSSPKKTP 285
>sp|GI_HHV11|ENVELOPE glycoprotein I|Human herpesvirus 1 (strain 17)
Query: 2 PSSSPRTSP 10
PSS+PR +P
Sbjct: 188 PSSAPRLAP 196
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 5 SPRTSP 10
SPR+SP
Sbjct: 91 SPRSSP 96
>sp|ORF24_TTVV1|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (strain VT416)
Query: 2 PSSSPRTSP 10
PS +P+TSP
Sbjct: 148 PSQAPQTSP 156
>sp|ORF24_TTVV2|ORF2/4 protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 2 PSSSPRTSP 10
PS +P+TSP
Sbjct: 148 PSQAPQTSP 156
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 SPSSSPRTSP 10
SP SSP T P
Sbjct: 418 SPDSSPTTRP 427
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 SPSSSPRTS 9
SP+S PR S
Sbjct: 428 SPASDPRLS 436
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 SPSSSPRTS 9
SP+S PR S
Sbjct: 429 SPASDPRLS 437
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 SPSSSPRTS 9
SP+S PR S
Sbjct: 429 SPASDPRLS 437
>sp|TAT_HV1Z6|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 1 SPSSSPRTSP 10
PSS PR +P
Sbjct: 72 QPSSQPRGNP 81
>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)
Query: 3 SSSPRTSP 10
S+ PRT P
Sbjct: 470 SAGPRTGP 477
210|Sequence|1046|1055|PRTSPCQSPT
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 5 PCQSPT 10
PC PT
Sbjct: 2075 PCTEPT 2080
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PRTSPCQSPT 10
P T+P SPT
Sbjct: 660 PPTNPYNSPT 669
>sp|E3145_ADE05|EARLY E3 14.5 kDa protein|Human adenovirus C serotype 5
Query: 4 SPCQSP 9
SPCQ P
Sbjct: 103 SPCQGP 108
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 PRTSPC 6
PRT PC
Sbjct: 1588 PRTVPC 1593
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 PRTSPC 6
PRT PC
Sbjct: 1593 PRTVPC 1598
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 5 PCQSP 9
PCQSP
Sbjct: 746 PCQSP 750
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 5 PCQSP 9
PCQSP
Sbjct: 746 PCQSP 750
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 5 PCQSP 9
PCQSP
Sbjct: 746 PCQSP 750
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 RTSPCQSPT 10
RTSP ++PT
Sbjct: 1036 RTSPRRAPT 1044
>sp|US9_CHV1|ENVELOPE protein US9 homolog|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 1 PRTSPCQSP 9
P T P Q+P
Sbjct: 20 PLTPPAQTP 28
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 3 TSPCQS 8
T+PCQS
Sbjct: 241 TTPCQS 246
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PRTSPCQSPT 10
P T+P +PT
Sbjct: 660 PPTNPYNTPT 669
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PRTSPCQSPT 10
P T+P +PT
Sbjct: 663 PPTNPYNTPT 672
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PRTSPCQSPT 10
P T+P +PT
Sbjct: 661 PPTNPYNTPT 670
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PRTSPCQSPT 10
P T+P +PT
Sbjct: 663 PPTNPYNTPT 672
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PRTSPCQSPT 10
P T+P +PT
Sbjct: 662 PPTNPYNTPT 671
>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)
Query: 4 SPCQSPT 10
SPC SP
Sbjct: 473 SPCASPV 479
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PRTSPCQSPT 10
P T+P +PT
Sbjct: 662 PPTNPYNTPT 671
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PRTSPCQSPT 10
P T+P +PT
Sbjct: 661 PPTNPYNTPT 670
>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 SPCQSPT 10
SPC SP
Sbjct: 473 SPCASPV 479
>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)
Query: 4 SPCQSPT 10
SPC SP
Sbjct: 473 SPCASPV 479
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PRTSPCQSP 9
PR P Q+P
Sbjct: 440 PRNFPVQAP 448
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PRTSPCQSPT 10
P T+P +PT
Sbjct: 662 PPTNPYNTPT 671
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PRTSPCQSPT 10
P T+P +PT
Sbjct: 662 PPTNPYNTPT 671
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PRTSPCQSPT 10
P T+P +PT
Sbjct: 662 PPTNPYNTPT 671
211|Sequence|1051|1060|CQSPTISEGP
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 CQSPTISEGP 10
C+S T++ GP
Sbjct: 2435 CESITLATGP 2444
Query: 3 SPTISEG 9
+PTI EG
Sbjct: 2645 NPTIEEG 2651
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 CQSPTISEGP 10
C+S T++ GP
Sbjct: 2436 CESITLATGP 2445
Query: 3 SPTISEG 9
+PTI EG
Sbjct: 2646 NPTIEEG 2652
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 CQSPTISEGP 10
C+S T++ GP
Sbjct: 2436 CESITLATGP 2445
Query: 3 SPTISEG 9
+PTI EG
Sbjct: 2646 NPTIEEG 2652
>sp|REX_HTL3P|PROTEIN Rex|Human T-cell leukemia virus 3
Query: 1 CQSPTISEGP 10
C SPT+ GP
Sbjct: 151 CPSPTLGSGP 160
>sp|VP30_MABVP|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 CQSPTISEG 9
C SP++S+G
Sbjct: 128 CGSPSLSKG 136
>sp|VP30_MABVM|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 CQSPTISEG 9
C SP++S+G
Sbjct: 128 CGSPSLSKG 136
>sp|REX_HTL1L|PROTEIN Rex|Human T-cell leukemia virus 1
Query: 1 CQSPTISEGP 10
C SPT + GP
Sbjct: 150 CPSPTPASGP 159
>sp|VP30_MABVO|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 CQSPTISEG 9
C SP++S+G
Sbjct: 128 CGSPSLSKG 136
>sp|VP30_MABVA|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 CQSPTISEG 9
C SP++S+G
Sbjct: 128 CGSPSLSKG 136
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 CQSPTISEGP 10
C++ T++ GP
Sbjct: 2434 CEALTLATGP 2443
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 CQSPTISEGP 10
C++ T++ GP
Sbjct: 2431 CEALTLATGP 2440
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 CQSPTISEGP 10
C++ T++ GP
Sbjct: 2434 CEALTLATGP 2443
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 CQSPTISEGP 10
C++ T++ GP
Sbjct: 2434 CEALTLATGP 2443
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 CQSPTISEGP 10
C++ T++ GP
Sbjct: 2434 CEALTLATGP 2443
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 CQSPTISEGP 10
C++ T++ GP
Sbjct: 2434 CEALTLATGP 2443
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 3 SPTISEG 9
+PTI+EG
Sbjct: 244 NPTIAEG 250
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 3 SPTISEG 9
+PTI+EG
Sbjct: 251 NPTIAEG 257
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 CQSPTISEGP 10
C++ T++ GP
Sbjct: 2433 CEALTLATGP 2442
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 CQSPTISEGP 10
C++ T++ GP
Sbjct: 2433 CEALTLATGP 2442
>sp|VP30_MABVR|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 CQSPTISEG 9
C SP++S+G
Sbjct: 128 CGSPSLSKG 136
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 3 SPTISEG 9
+PTI+EG
Sbjct: 245 NPTIAEG 251
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 4 PTISEG 9
PTI+EG
Sbjct: 242 PTIAEG 247
>sp|SCAF_HHV8P|CAPSID scaffolding protein|Human herpesvirus 8 type P
Query: 1 CQSPTISE 8
CQ PT+ E
Sbjct: 414 CQFPTMKE 421
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 SPTISEG 9
+PTI EG
Sbjct: 2640 NPTIEEG 2646
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 SPTISEG 9
+PTI EG
Sbjct: 2640 NPTIEEG 2646
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 SPTISEG 9
+PTI EG
Sbjct: 2640 NPTIEEG 2646
>sp|NEF_HV1VI|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 QSPTISEG 9
Q+PT +EG
Sbjct: 22 QTPTAAEG 29
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 3 SPTISEG 9
+PTI+EG
Sbjct: 246 NPTIAEG 252
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 SPTISEG 9
+PTI EG
Sbjct: 2640 NPTIEEG 2646
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 SPTISEG 9
+PTI EG
Sbjct: 2640 NPTIEEG 2646
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 3 SPTISEG 9
+PT++EG
Sbjct: 238 NPTVAEG 244
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 3 SPTISEG 9
+PT++EG
Sbjct: 237 NPTVAEG 243
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 5 TISEGP 10
T+SEGP
Sbjct: 731 TLSEGP 736
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 TISEGP 10
T+SEGP
Sbjct: 731 TLSEGP 736
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 4 PTISEG 9
PTI EG
Sbjct: 304 PTIKEG 309
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 QSPTISEG 9
+ PTIS+G
Sbjct: 227 EGPTISKG 234
212|Sequence|1056|1065|ISEGPVPSLP
>sp|NS1_I56A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PIPSLP 167
>sp|NS1_I02A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
Query: 3 EGPVPSLP 10
EG PSLP
Sbjct: 208 EGGRPSLP 215
>sp|NS1_I02A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
Query: 2 SEGPVPSLP 10
+EG PSLP
Sbjct: 207 NEGGRPSLP 215
>sp|NS1_I96A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I57A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Singapore/1/1957
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I02A6|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 157 PLPSLP 162
>sp|NS1_I02A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 157 PLPSLP 162
>sp|NS1_I00A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/New
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I77A9|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/New
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I73A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/London/1416/1973
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I02A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I05A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 153 PLPSLP 158
>sp|NS1_I68A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Korea/426/1968
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I61A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I02A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
Query: 2 SEGPVPSLP 10
+EG PSLP
Sbjct: 207 NEGGRPSLP 215
>sp|NS1_I02A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Guinea
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
Query: 2 SEGPVPSLP 10
+EG PSLP
Sbjct: 207 NEGGRPSLP 215
>sp|NS1_I96A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I70A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Qu/7/1970
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I69A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/England/878/1969
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I47A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Fort
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I71A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/1/1971
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I68A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Aichi/2/1968
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I67A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Tokyo/3/1967
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I03A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 157 PLPSLP 162
>sp|NS1_I68A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I67A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I57A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Japan/305/1957
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I03A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 157 PLPSLP 162
>sp|NS1_I18A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Brevig
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I80A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I77AB|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USSR/90/1977
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I77AA|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Brazil/11/1978
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I54A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I51A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Albany/12/1951
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I45A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I83A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chile/1/1983
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I80AA|NON-STRUCTURAL protein 1|Influenza A virus (strain A/India/6263/1980
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I01A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 157 PLPSLP 162
>sp|NS1_I01A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 157 PLPSLP 162
>sp|NS1_I00A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Duck/Hong
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 157 PLPSLP 162
>sp|NS1_I85A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I78A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I97A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I78A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I59A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I50A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Fort
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I40A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hickox/1940
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I01A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 157 PLPSLP 162
>sp|NS1_I01A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 157 PLPSLP 162
>sp|NS1_I35A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Phila/1935
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I33A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Wilson-Smith/1933
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I82A8|NON-STRUCTURAL protein 1|Influenza A virus (strain
Query: 5 PVPSLP 10
P+PS+P
Sbjct: 162 PIPSMP 167
>sp|NS1_I24A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Japan/1924
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 159 PLPSLP 164
>sp|NS1_I02A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 140 PLPSLP 145
>sp|NS1_I97A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I54A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/1/1954
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I60A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Ann
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I36A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Henry/1936
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I34A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Puerto
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I06A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I000X|NON-STRUCTURAL protein 1|Influenza A virus (strain A/X-31
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I57A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I57A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I57A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/1957
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 162 PLPSLP 167
>sp|NS1_I96A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 5 PVPSLP 10
P+PS+P
Sbjct: 162 PIPSVP 167
>sp|NS1_I43A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Iowa/1943
Query: 5 PVPSLP 10
P+PSLP
Sbjct: 156 PLPSLP 161
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 ISEGPVPSL 9
+SEG VP L
Sbjct: 1134 LSEGGVPGL 1142
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 SEGPVPS 8
S+GPVPS
Sbjct: 316 SQGPVPS 322
>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P
Query: 3 EGPVPS 8
EGPVPS
Sbjct: 296 EGPVPS 301
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 SEGPVPS 8
S+GPVPS
Sbjct: 316 SQGPVPS 322
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 EGPVPSL 9
EGP+P +
Sbjct: 1647 EGPLPEI 1653
>sp|PAX_I97A1|PROTEIN PA-X|Influenza A virus (strain A/Hong
Query: 2 SEGPVPSLP 10
S+GP LP
Sbjct: 207 SQGPCVGLP 215
>sp|PAX_I97A0|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 2 SEGPVPSLP 10
S+GP LP
Sbjct: 207 SQGPCVGLP 215
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 ISEGPVP 7
+SE P+P
Sbjct: 3621 VSENPLP 3627
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 EGPVPSL 9
EGP+P +
Sbjct: 1648 EGPLPEI 1654
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 EGPVPSL 9
EGP+P +
Sbjct: 1648 EGPLPEI 1654
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 4 GPVPS 8
GPVPS
Sbjct: 500 GPVPS 504
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 4 GPVPS 8
GPVPS
Sbjct: 501 GPVPS 505
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ISEGPV 6
ISEGP+
Sbjct: 1649 ISEGPL 1654
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ISEGPV 6
ISEGP+
Sbjct: 1649 ISEGPL 1654
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ISEGPV 6
ISEGP+
Sbjct: 1649 ISEGPL 1654
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ISEGPV 6
ISEGP+
Sbjct: 1649 ISEGPL 1654
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ISEGPV 6
ISEGP+
Sbjct: 1647 ISEGPL 1652
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ISEGPV 6
ISEGP+
Sbjct: 1649 ISEGPL 1654
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ISEGPV 6
ISEGP+
Sbjct: 1483 ISEGPL 1488
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ISEGPV 6
ISEGP+
Sbjct: 1649 ISEGPL 1654
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus
Query: 1 ISEGPVP 7
+ EGP+P
Sbjct: 53 LEEGPLP 59
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus
Query: 1 ISEGPVP 7
+ EGP+P
Sbjct: 53 LEEGPLP 59
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 ISEGPVPSL 9
+SEG VP +
Sbjct: 1134 LSEGGVPGI 1142
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ISEGPV 6
ISEGP+
Sbjct: 1649 ISEGPL 1654
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ISEGPV 6
ISEGP+
Sbjct: 1649 ISEGPL 1654
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 ISEGPVPSL 9
+SEG VP +
Sbjct: 1134 LSEGGVPGI 1142
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 ISEGPVPSL 9
+SEG VP +
Sbjct: 1134 LSEGGVPGI 1142
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 ISEGPVPSL 9
+SEG VP +
Sbjct: 1134 LSEGGVPGI 1142
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 ISEGPVPSL 9
+SEG VP +
Sbjct: 1136 LSEGGVPGI 1144
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 ISEGPVPSL 9
+SEG VP +
Sbjct: 1136 LSEGGVPGI 1144
>sp|VL2_HPV16|MINOR capsid protein L2|Human papillomavirus type 16
Query: 2 SEGPVPSLP 10
S PVPS+P
Sbjct: 378 STTPVPSVP 386
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 ISEGPVPSL 9
+SEG VP +
Sbjct: 1134 LSEGGVPGV 1142
213|Sequence|1061|1070|VPSLPIRPSR
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 1 VPSLPIRPSR 10
+PSL RPS+
Sbjct: 201 IPSLKTRPSK 210
>sp|IR10_HCMVM|PROTEIN IRL10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 LPIRPSR 10
+P RPSR
Sbjct: 141 IPYRPSR 147
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 1 VPSLPIR 7
+PSLPI+
Sbjct: 51 LPSLPIQ 57
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 1 VPSLPIR 7
+PSLPI+
Sbjct: 51 LPSLPIQ 57
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 VPSLPIR 7
+PSLPI+
Sbjct: 51 LPSLPIQ 57
>sp|IR10_HCMVA|PROTEIN IRL10|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LPIRPSR 10
+P RPSR
Sbjct: 142 IPYRPSR 148
>sp|Y126_ADE07|UNCHARACTERIZED 12.6 kDa early protein|Human adenovirus B serotype 7
Query: 1 VPSLPIRPSR 10
VPS P RP R
Sbjct: 35 VPSRPCRPVR 44
>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VPSLPI 6
+PSLPI
Sbjct: 402 LPSLPI 407
>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)
Query: 1 VPSLPI 6
+PSLPI
Sbjct: 402 LPSLPI 407
>sp|CFLA_MCV1|VIRAL CASP8 and FADD-like apoptosis|Molluscum contagiosum virus subtype 1
Query: 2 PSLPIRPSR 10
PSLP+R R
Sbjct: 192 PSLPVRTLR 200
>sp|NEF_HV1S2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PSLPIRP 8
P +P+RP
Sbjct: 69 PQIPLRP 75
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 SLPIRPSR 10
S P+RPS+
Sbjct: 598 SQPLRPSQ 605
>sp|NEF_HV1VI|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PSLPIRP 8
P +P+RP
Sbjct: 72 PQVPVRP 78
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 3 SLPIRPS 9
+LP RPS
Sbjct: 609 TLPTRPS 615
>sp|VL2_HPV34|MINOR capsid protein L2|Human papillomavirus type 34
Query: 1 VPSLPIRPS 9
P++P++PS
Sbjct: 428 TPTVPVQPS 436
214|Sequence|1066|1075|IRPSRAPSRT
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 RPSRAPS 8
RPSR PS
Sbjct: 353 RPSRTPS 359
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 RPSRAPS 8
RPSR PS
Sbjct: 353 RPSRTPS 359
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 RPSRAPS 8
RPSR PS
Sbjct: 353 RPSRTPS 359
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 IRPSRAPSRT 10
+ PSRAPSR+
Sbjct: 1840 LTPSRAPSRS 1849
Query: 3 PSRAPSRT 10
PSR+ SRT
Sbjct: 1846 PSRSASRT 1853
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 IRPSRAPSRT 10
+ PSRAPSR+
Sbjct: 1832 LTPSRAPSRS 1841
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 RPSRAPSR 9
RPSR P+R
Sbjct: 462 RPSRGPTR 469
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 IRPSRAPSRT 10
+ PSR PSR+
Sbjct: 1840 LTPSRTPSRS 1849
Query: 1 IRPSRAPSRT 10
+ PSRA SRT
Sbjct: 1810 LAPSRACSRT 1819
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus
Query: 2 RPSRAPSR 9
RP R PSR
Sbjct: 21 RPGRIPSR 28
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus
Query: 2 RPSRAPSR 9
RP R PSR
Sbjct: 21 RPGRIPSR 28
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 RPSRAPS 8
RPSR PS
Sbjct: 104 RPSRGPS 110
>sp|HBEAG_HBVD5|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 2 RPSRAP 7
RPS AP
Sbjct: 162 RPSNAP 167
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 1 IRPSRAPSRT 10
++P++A +RT
Sbjct: 215 LKPAKAATRT 224
>sp|CAPSD_HBVD5|CAPSID protein|Hepatitis B virus genotype D
Query: 2 RPSRAP 7
RPS AP
Sbjct: 133 RPSNAP 138
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 RPSRAPSR 9
RPS P+R
Sbjct: 462 RPSSRPAR 469
>sp|UL24_HHV8P|PROTEIN UL24 homolog|Human herpesvirus 8 type P
Query: 2 RPSRAPSRT 10
+P+RA SRT
Sbjct: 231 QPTRAKSRT 239
>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)
Query: 1 IRPSRAPS 8
I PSR PS
Sbjct: 53 IHPSRPPS 60
215|Sequence|1071|1080|APSRTPGPPS
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PSRTPGP 8
PSRTP P
Sbjct: 354 PSRTPSP 360
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PSRTPGP 8
PSRTP P
Sbjct: 354 PSRTPSP 360
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PSRTPGP 8
PSRTP P
Sbjct: 354 PSRTPSP 360
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 RTPGPPS 10
+ PGPPS
Sbjct: 824 KGPGPPS 830
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 RTPGPPS 10
+ PGPPS
Sbjct: 824 KGPGPPS 830
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 RTPGPPS 10
+ PGPPS
Sbjct: 823 KGPGPPS 829
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 2 PSRTPGPP 9
P RTPG P
Sbjct: 267 PLRTPGGP 274
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 APSRTPGP 8
P RTP P
Sbjct: 655 GPRRTPSP 662
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 6 PGPPS 10
PGPPS
Sbjct: 1771 PGPPS 1775
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 6 PGPPS 10
PGPPS
Sbjct: 1953 PGPPS 1957
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 6 PGPPS 10
PGPPS
Sbjct: 1953 PGPPS 1957
>sp|VE2_HPV1|REGULATORY protein E2|Human papillomavirus type 1 (Human
Query: 2 PSRTPG 7
PSRTPG
Sbjct: 280 PSRTPG 285
>sp|PHOSP_VSNJO|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 3 SRTPGPP 9
S +PGPP
Sbjct: 191 SHSPGPP 197
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 2 PSRTPGPPS 10
P R P PP+
Sbjct: 275 PDRRPLPPA 283
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 1 APSRTPGPPS 10
AP+ PGPP+
Sbjct: 306 APAVLPGPPA 315
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 1 APSRTPGP 8
AP R PGP
Sbjct: 414 APGRVPGP 421
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 2 PSRTPGPPS 10
P R P PP+
Sbjct: 275 PDRHPLPPA 283
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 1 APSRTPGP 8
AP R PGP
Sbjct: 404 APGRVPGP 411
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 PSRTPGPP 9
P R PG P
Sbjct: 267 PLRLPGGP 274
>sp|PHOSP_RABVR|PHOSPHOPROTEIN virus (strain China/MRV) (RABV)
Query: 6 PGPPS 10
PGPP+
Sbjct: 179 PGPPA 183
>sp|PHOSP_RABVC|PHOSPHOPROTEIN virus (strain CVS-11) (RABV)
Query: 6 PGPPS 10
PGPP+
Sbjct: 179 PGPPA 183
>sp|PHOSP_RABVA|PHOSPHOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 6 PGPPS 10
PGPP+
Sbjct: 179 PGPPA 183
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PSRTPGPPS 10
PS+TPG P+
Sbjct: 602 PSQTPGGPT 610
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 TPGPPS 10
TP PP+
Sbjct: 122 TPSPPN 127
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 APSRTPGPPS 10
APS+T PP+
Sbjct: 378 APSKTTLPPT 387
>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)
Query: 4 RTPGPP 9
RTPG P
Sbjct: 160 RTPGHP 165
>sp|CEP1_HHV11|CYTOPLASMIC envelopment protein 1|Human herpesvirus 1 (strain 17)
Query: 4 RTPGPP 9
R PGPP
Sbjct: 243 RLPGPP 248
216|Sequence|1076|1085|PGPPSAQSSP
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 PGPPSAQSS 9
PGPPS+ +S
Sbjct: 826 PGPPSSDAS 834
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PGPPSAQSS 9
PGPPS+ +S
Sbjct: 826 PGPPSSDAS 834
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PGPPSAQSS 9
PGPPS+ +S
Sbjct: 825 PGPPSSDAS 833
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 3 PPSAQSSP 10
PP ++S+P
Sbjct: 267 PPKSRSTP 274
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 PGPPSAQ 7
PG PS Q
Sbjct: 80 PGSPSGQ 86
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 PGPPSAQ 7
PG PS Q
Sbjct: 80 PGSPSGQ 86
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 1 PGPPSAQ 7
PG PS Q
Sbjct: 80 PGSPSGQ 86
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GPPSAQSSP 10
PP+A S+P
Sbjct: 580 APPAANSAP 588
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 PGPPSA 6
P PPSA
Sbjct: 1696 PDPPSA 1701
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 PGPPSA 6
P PPSA
Sbjct: 1696 PDPPSA 1701
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 PPSAQSSP 10
PP ++S+P
Sbjct: 1709 PPKSRSTP 1716
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 PPSAQSSP 10
PP ++S+P
Sbjct: 1709 PPQSRSTP 1716
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 PGPPSA 6
P PPSA
Sbjct: 1707 PEPPSA 1712
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 PGPPSA 6
P PPSA
Sbjct: 1707 PEPPSA 1712
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 PGPPSA 6
P PPSA
Sbjct: 1707 PEPPSA 1712
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 PGPPSA 6
P PPSA
Sbjct: 1707 PEPPSA 1712
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 PGPPSA 6
P PPSA
Sbjct: 1707 PEPPSA 1712
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 PGPPSA 6
P PPSA
Sbjct: 1707 PEPPSA 1712
>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PGPPSAQS 8
PGPP+A+
Sbjct: 304 PGPPTARE 311
>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PGPPSAQS 8
PGPP+A+
Sbjct: 304 PGPPTARE 311
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 PGPPSA 6
P PPSA
Sbjct: 1707 PEPPSA 1712
>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PGPPSAQS 8
PGPP+A+
Sbjct: 304 PGPPTARE 311
217|Sequence|1081|1090|AQSSPIDAQP
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 3 SSPIDAQ 9
SSP+DA+
Sbjct: 2125 SSPLDAE 2131
218|Sequence|1086|1095|IDAQPATPLP
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 1 IDAQPATPLP 10
+ QP TP+P
Sbjct: 178 VACQPMTPIP 187
>sp|VL2_HPV50|MINOR capsid protein L2|Human papillomavirus type 50
Query: 1 IDAQPATPLP 10
IDAQP P P
Sbjct: 167 IDAQPIAPYP 176
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 DAQPATPL 9
D PATP+
Sbjct: 2430 DLSPATPM 2437
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 IDAQPATP 8
++A+P TP
Sbjct: 2754 VNAEPETP 2761
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 IDAQPATP 8
++A+P TP
Sbjct: 2754 VNAEPETP 2761
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 IDAQPATP 8
++A+P TP
Sbjct: 2754 VNAEPETP 2761
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 IDAQPATP 8
++A+P TP
Sbjct: 2754 VNAEPETP 2761
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 IDAQPATP 8
++A+P TP
Sbjct: 2754 VNAEPETP 2761
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 IDAQPATPLP 10
IDA P T P
Sbjct: 5233 IDAYPLTKHP 5242
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 IDAQPATPLP 10
IDA P T P
Sbjct: 5256 IDAYPLTKHP 5265
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 3 AQPATPL 9
AQPA P+
Sbjct: 327 AQPAAPM 333
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 5 PATPLP 10
P TPLP
Sbjct: 2069 PCTPLP 2074
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 PATPLP 10
P TPLP
Sbjct: 2069 PCTPLP 2074
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 5 PATPLP 10
P TPLP
Sbjct: 2069 PCTPLP 2074
>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus
Query: 4 QPATPLP 10
+P TP+P
Sbjct: 391 RPGTPMP 397
219|Sequence|1091|1100|ATPLPQKDPA
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 2 TPLPQKDPA 10
TP PQ DPA
Sbjct: 696 TPGPQFDPA 704
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 2 TPLPQKDPA 10
TP PQ DPA
Sbjct: 696 TPGPQFDPA 704
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 TPLPQKDPA 10
TP PQ DPA
Sbjct: 696 TPGPQFDPA 704
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 2 TPLPQKDPA 10
TP PQ DPA
Sbjct: 696 TPGPQFDPA 704
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 TPLPQKDPA 10
TP PQ DPA
Sbjct: 694 TPGPQFDPA 702
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 TPLPQKDPA 10
TP PQ DPA
Sbjct: 696 TPGPQFDPA 704
>sp|YVD1_VACCC|UNCHARACTERIZED 7.0 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 TPLPQK 7
TPLP K
Sbjct: 31 TPLPNK 36
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 5 PQKDPA 10
P+KDP+
Sbjct: 460 PKKDPS 465
>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human
Query: 1 ATPLPQKDP 9
A P PQ DP
Sbjct: 439 APPEPQTDP 447
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 PLPQKDP 9
P+P DP
Sbjct: 2417 PIPDGDP 2423
>sp|YVED_VACCC|UNCHARACTERIZED 7.6 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 TPLPQKDP 9
T LP+ DP
Sbjct: 24 TYLPENDP 31
>sp|TR14_HCMVA|PROTEIN TRL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TPLPQKDP 9
T LP+ DP
Sbjct: 172 TKLPKYDP 179
>sp|UL124_HCMVM|UNCHARACTERIZED protein UL124|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ATPLPQKDP 9
A PLP+K P
Sbjct: 126 APPLPEKSP 134
>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 4 LPQKDP 9
LP++DP
Sbjct: 9 LPKRDP 14
>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 4 LPQKDP 9
LP++DP
Sbjct: 9 LPKRDP 14
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 4 LPQKDP 9
LP++DP
Sbjct: 9 LPKRDP 14
>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 LPQKDP 9
LP++DP
Sbjct: 9 LPKRDP 14
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 TPLPQK 7
TPLP+K
Sbjct: 869 TPLPEK 874
>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)
Query: 4 LPQKDP 9
LP++DP
Sbjct: 9 LPKRDP 14
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 4 LPQKDP 9
LP++DP
Sbjct: 9 LPKRDP 14
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 1 ATPLPQKDP 9
ATP P DP
Sbjct: 466 ATPGPSVDP 474
>sp|HEMA_VACCI|PROTEIN OPG185|Vaccinia virus (strain IHD-J) (VACV)
Query: 1 ATPLPQ 6
ATP PQ
Sbjct: 16 ATPFPQ 21
>sp|HEMA_VACCA|PROTEIN OPG185|Vaccinia virus (strain Ankara) (VACV)
Query: 1 ATPLPQ 6
ATP PQ
Sbjct: 16 ATPFPQ 21
>sp|HEMA_VACCC|PROTEIN OPG185|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 ATPLPQ 6
ATP PQ
Sbjct: 16 ATPFPQ 21
220|Sequence|1096|1105|QKDPAQPLEP
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 4 PAQPLEP 10
PAQP+EP
Sbjct: 2476 PAQPIEP 2482
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 4 PAQPLEP 10
PAQP+EP
Sbjct: 2476 PAQPIEP 2482
Query: 4 PAQPLEP 10
PAQP++P
Sbjct: 2461 PAQPVQP 2467
Query: 4 PAQPLEP 10
PAQP++P
Sbjct: 2470 PAQPVQP 2476
Query: 4 PAQPLEP 10
PAQP +P
Sbjct: 2467 PAQPAQP 2473
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 3 DPAQPLEP 10
DP P+EP
Sbjct: 10 DPIDPVEP 17
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 3 DPAQPLEP 10
DPA PL P
Sbjct: 860 DPAHPLHP 867
Query: 1 QKDPAQPL 8
Q DPA+P
Sbjct: 1231 QSDPARPF 1238
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 3 DPAQPLEP 10
DPA PL P
Sbjct: 860 DPAHPLHP 867
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 3 DPAQPLEP 10
DP P+EP
Sbjct: 10 DPIDPVEP 17
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 QKDPAQP 7
KDP QP
Sbjct: 725 HKDPEQP 731
>sp|NSP4_ROTWI|NON-STRUCTURAL glycoprotein 4|Rotavirus A (isolate RVA/Human/United
Query: 2 KDPAQPLE 9
K+P +PLE
Sbjct: 163 KNPYEPLE 170
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 AQPLEP 10
A+P+EP
Sbjct: 474 AEPMEP 479
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 AQPLEP 10
A+P+EP
Sbjct: 474 AEPMEP 479
>sp|NSP4_ROTAM|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 2 KDPAQPLE 9
K+P +PLE
Sbjct: 163 KNPYEPLE 170
>sp|PG130_MONPV|39KDA core protein OPG130|Monkeypox virus (MPXV)
Query: 2 KDPAQPLEP 10
+ P QPL+P
Sbjct: 66 RQPTQPLQP 74
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 KDPAQPLEP 10
K P++P+EP
Sbjct: 457 KQPSEPVEP 465
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 KDPAQPLE 9
+DPA PL
Sbjct: 1183 RDPASPLS 1190
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 3 DPAQPL 8
DPA PL
Sbjct: 1048 DPAHPL 1053
>sp|PG130_VARV|39KDA core protein OPG130|Variola virus
Query: 2 KDPAQPLEP 10
+ P QPL+P
Sbjct: 66 RQPIQPLQP 74
>sp|PG130_VAR67|39KDA core protein OPG130|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 KDPAQPLEP 10
+ P QPL+P
Sbjct: 66 RQPIQPLQP 74
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 3 DPAQPL 8
DPA PL
Sbjct: 1046 DPAHPL 1051
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 4 PAQPLEP 10
PAQP++P
Sbjct: 272 PAQPMQP 278
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 3 DPAQPLE 9
DP P+E
Sbjct: 10 DPVDPIE 16
>sp|PG130_VACCC|39KDA core protein OPG130|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 KDPAQPLEP 10
+ P QPL+P
Sbjct: 66 RQPIQPLQP 74
221|Sequence|1101|1110|QPLEPKRPPP
>sp|Z_SABVB|RING finger protein Z|Sabia mammarenavirus (isolate
Query: 2 PLEPKRPPP 10
P+EP PPP
Sbjct: 90 PIEPSAPPP 98
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 PLEPKRPPP 10
PLE +RP P
Sbjct: 1579 PLEGQRPDP 1587
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 PLEPKRPPP 10
P++ K PPP
Sbjct: 1411 PIDMKNPPP 1419
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PLEPKRP 8
P EP RP
Sbjct: 714 PREPDRP 720
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 1 QPLEPK-RPPP 10
+P+EP+ RP P
Sbjct: 62 EPMEPESRPGP 72
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 1 QPLEPK-RPPP 10
+P+EP+ RP P
Sbjct: 61 EPMEPESRPGP 71
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 QP-LEPKRPPP 10
QP L+P R PP
Sbjct: 783 QPVLQPLRLPP 793
>sp|Z_JUNIN|RING finger protein Z|Junin mammarenavirus (JUNV) (Junn
Query: 2 PLEPKRPPP 10
P+EP PPP
Sbjct: 86 PVEPTAPPP 94
>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 5 PKRPPP 10
PKR PP
Sbjct: 10 PKRDPP 15
>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 5 PKRPPP 10
PKR PP
Sbjct: 10 PKRDPP 15
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 2 PLEPKRPP 9
PL+ K PP
Sbjct: 514 PLQIKLPP 521
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 5 PKRPPP 10
PKR PP
Sbjct: 10 PKRDPP 15
>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)
Query: 5 PKRPPP 10
PKR PP
Sbjct: 10 PKRDPP 15
>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 PKRPPP 10
PKR PP
Sbjct: 10 PKRDPP 15
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 5 PKRPPP 10
PKR PP
Sbjct: 10 PKRDPP 15
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PLEPKRPP 9
P PK PP
Sbjct: 234 PSPPKLPP 241
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PLEPKRPP 9
P PK PP
Sbjct: 234 PSPPKLPP 241
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 PLEPKRPP 9
PLE +R P
Sbjct: 1050 PLEVRREP 1057
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 PLEPKRPP 9
PLE +R P
Sbjct: 1050 PLEVRREP 1057
>sp|PG097_VACCC|PROTEIN OPG097|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 LEPKRPP 9
L+P +PP
Sbjct: 48 LQPNQPP 54
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 2 PLEPKRPPP 10
P++P P P
Sbjct: 11 PIDPVEPEP 19
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 QPLEPKRPPP 10
+P EP+ PP
Sbjct: 21 EPREPEVAPP 30
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 QPLEPKRPPP 10
+P EP+ PP
Sbjct: 21 EPREPEVAPP 30
>sp|Z_MACHU|RING finger protein Z|Machupo virus (MACV)
Query: 2 PLEPKRPPP 10
P+EP PPP
Sbjct: 86 PVEPSAPPP 94
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 PLEPKRPPP 10
PLE + P P
Sbjct: 1580 PLEGQNPTP 1588
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 PLEPKRPPP 10
PLE + P P
Sbjct: 1580 PLEGQNPTP 1588
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 2 PLEPKRPPP 10
P++P P P
Sbjct: 11 PIDPVEPEP 19
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 QPLEPKRP 8
+PL P RP
Sbjct: 699 RPLVPDRP 706
>sp|VL2_HPV34|MINOR capsid protein L2|Human papillomavirus type 34
Query: 2 PLEPKRPP 9
PL+P RPP
Sbjct: 88 PLQPTRPP 95
222|Sequence|1106|1115|KRPPPPRPVA
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PPPPRP 8
PPPPRP
Sbjct: 14 PPPPRP 19
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPPPRP 8
PPPPRP
Sbjct: 14 PPPPRP 19
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 3 PPPPRPVA 10
PPPP PV
Sbjct: 626 PPPPSPVG 633
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 KRPPPP 6
K PPPP
Sbjct: 2862 KAPPPP 2867
Query: 3 PPPP 6
PPPP
Sbjct: 2865 PPPP 2868
Query: 2 RPPPPRP 8
+ PPP P
Sbjct: 2862 KAPPPPP 2868
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 PPPPR 7
PPPPR
Sbjct: 1446 PPPPR 1450
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 4 PPPRP 8
PPP+P
Sbjct: 1224 PPPKP 1228
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RPPPPR 7
RPP PR
Sbjct: 721 RPPVPR 726
>sp|PHOSP_PI4HB|PHOSPHOPROTEIN parainfluenza 4b virus (strain
Query: 2 RPPPPRPVA 10
+PPP RP++
Sbjct: 33 QPPPNRPLS 41
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 KRPPPP 6
K PPPP
Sbjct: 1415 KNPPPP 1420
>sp|V_MEASC|NON-STRUCTURAL protein V|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 PPPPRP 8
PPPP P
Sbjct: 213 PPPPNP 218
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RPPPPRP 8
R PP RP
Sbjct: 727 RGPPDRP 733
>sp|UL139_HCMVM|MEMBRANE glycoprotein UL139|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PPPPR 7
PPPPR
Sbjct: 134 PPPPR 138
>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 3 PPPPRP 8
PPPP P
Sbjct: 213 PPPPNP 218
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 PPPPRPVA 10
P PPR VA
Sbjct: 850 PRPPRAVA 857
>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RPPPP 6
RPPPP
Sbjct: 109 RPPPP 113
>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RPPPP 6
RPPPP
Sbjct: 109 RPPPP 113
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 PPPPRPVA 10
P PPR VA
Sbjct: 850 PRPPRAVA 857
>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)
Query: 3 PPPPRP 8
PPPP P
Sbjct: 213 PPPPDP 218
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 PPPRPV 9
PPPR +
Sbjct: 825 PPPRKI 830
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 PPPRPV 9
PPPR +
Sbjct: 825 PPPRKI 830
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 PPPPRPVA 10
P PPR VA
Sbjct: 827 PRPPRAVA 834
Query: 1 KRPPPP 6
+ PPPP
Sbjct: 1429 QSPPPP 1434
>sp|V_MEASI|NON-STRUCTURAL protein V|Measles virus (strain IP-3-Ca) (MeV)
Query: 3 PPPPRP 8
PPPP P
Sbjct: 213 PPPPDP 218
>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 1 KRPPPP 6
KR PPP
Sbjct: 11 KRDPPP 16
>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 1 KRPPPP 6
KR PPP
Sbjct: 11 KRDPPP 16
>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)
Query: 1 KRPPPP 6
KR PPP
Sbjct: 11 KRDPPP 16
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 RPPPP 6
+PPPP
Sbjct: 1419 KPPPP 1423
Query: 3 PPPPRPV 9
P PPR V
Sbjct: 816 PRPPRAV 822
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PPPPR 7
PPPPR
Sbjct: 353 PPPPR 357
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPPPR 7
PPPPR
Sbjct: 353 PPPPR 357
>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KRPPPP 6
KR PPP
Sbjct: 11 KRDPPP 16
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 1 KRPPPP 6
KR PPP
Sbjct: 11 KRDPPP 16
>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 3 PPPPRP 8
PPPP P
Sbjct: 213 PPPPDP 218
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 4 PPPRPVA 10
PPP PVA
Sbjct: 12 PPPTPVA 18
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 1 KRPPPP 6
KR PPP
Sbjct: 11 KRDPPP 16
>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 KRPPPPRP 8
+RP PP P
Sbjct: 157 RRPKPPVP 164
>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 3 PPPPRP 8
PPPP P
Sbjct: 213 PPPPDP 218
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 4 PPPRPVA 10
PPP P+A
Sbjct: 40 PPPGPIA 46
>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)
Query: 3 PPPPRP 8
PPPP P
Sbjct: 213 PPPPDP 218
>sp|V_MEASE|NON-STRUCTURAL protein V|Measles virus (strain Edmonston) (MeV)
Query: 3 PPPPRP 8
PPPP P
Sbjct: 213 PPPPDP 218
>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 PPPPRP 8
PPPP P
Sbjct: 213 PPPPDP 218
>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)
Query: 3 PPPPRP 8
PPPP P
Sbjct: 213 PPPPDP 218
>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)
Query: 3 PPPPRP 8
PPPP P
Sbjct: 213 PPPPDP 218
>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 3 PPPPRP 8
PPPP P
Sbjct: 213 PPPPDP 218
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 4 PPPRPVA 10
PPP PVA
Sbjct: 12 PPPTPVA 18
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 PPPP 6
PPPP
Sbjct: 1464 PPPP 1467
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 PPPP 6
PPPP
Sbjct: 1445 PPPP 1448
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 PPPP 6
PPPP
Sbjct: 1444 PPPP 1447
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 1 KRPPPPRP 8
KRP P P
Sbjct: 683 KRPKTPPP 690
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 PPPP 6
PPPP
Sbjct: 1454 PPPP 1457
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 KRPPPPRP 8
KRP P P
Sbjct: 687 KRPKTPPP 694
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 PPPRPVA 10
PPP P A
Sbjct: 232 PPPLPTA 238
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 PPPP 6
PPPP
Sbjct: 1456 PPPP 1459
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 PPPP 6
PPPP
Sbjct: 1445 PPPP 1448
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 PPPP 6
PPPP
Sbjct: 1448 PPPP 1451
>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 3 PPPPRP 8
PPPP P
Sbjct: 213 PPPPDP 218
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 PPPP 6
PPPP
Sbjct: 1455 PPPP 1458
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 PPPP 6
PPPP
Sbjct: 1446 PPPP 1449
>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12
Query: 2 RPPPPR 7
+PPPP+
Sbjct: 18 QPPPPK 23
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 PPPP 6
PPPP
Sbjct: 1454 PPPP 1457
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 PPPP 6
PPPP
Sbjct: 1457 PPPP 1460
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 PPPP 6
PPPP
Sbjct: 1446 PPPP 1449
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 PPPP 6
PPPP
Sbjct: 1443 PPPP 1446
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 PPPP 6
PPPP
Sbjct: 1462 PPPP 1465
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 4 PPPRPVA 10
PPP PV+
Sbjct: 12 PPPNPVS 18
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 KRPPPPRPVA 10
K P PP VA
Sbjct: 2886 KAPEPPTGVA 2895
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 PPPP 6
PPPP
Sbjct: 1424 PPPP 1427
Query: 3 PPPPRPV 9
P PPR V
Sbjct: 821 PRPPRAV 827
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 2 RPPPPRPVA 10
RP PPRP +
Sbjct: 40 RPAPPRPTS 48
>sp|V_PI4HB|NON-STRUCTURAL protein V|Human parainfluenza 4b virus (strain
Query: 2 RPPPPRPVA 10
+PPP RP++
Sbjct: 33 QPPPNRPLS 41
>sp|VP30_MABVR|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 KRPPPPR 7
K PPPP+
Sbjct: 69 KPPPPPK 75
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 KRPPPPRPVA 10
K P PP VA
Sbjct: 2888 KAPEPPLGVA 2897
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 PPRPV 9
PPRP+
Sbjct: 763 PPRPM 767
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 PPRPV 9
PPRP+
Sbjct: 763 PPRPM 767
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 4 PPPRPVA 10
PPP PV+
Sbjct: 12 PPPAPVS 18
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 PPPPRPV 9
P PPR V
Sbjct: 821 PRPPRAV 827
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 4 PPPRPVA 10
PPP PV+
Sbjct: 12 PPPNPVS 18
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 4 PPPRPVA 10
PPP PV+
Sbjct: 12 PPPNPVS 18
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 PPPPRPV 9
P PPR V
Sbjct: 847 PRPPRAV 853
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 PPPPRPVA 10
P PRP A
Sbjct: 744 PGAPRPTA 751
Query: 3 PPPPRPV 9
P PPR V
Sbjct: 853 PRPPRAV 859
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 KRPPPPRPV 9
K P PP+ V
Sbjct: 2893 KAPEPPQGV 2901
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 3 PPPPRPV 9
PPPP V
Sbjct: 123 PPPPDGV 129
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 PPPPRPV 9
P PPR V
Sbjct: 848 PRPPRAV 854
>sp|VL1_HPV64|MAJOR capsid protein L1|Human papillomavirus type 64
Query: 1 KRPPPPR 7
+RP PP+
Sbjct: 116 QRPQPPK 122
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 3 PPPPRPV 9
P PPR V
Sbjct: 848 PRPPRAV 854
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 PPPPRPV 9
P PPR V
Sbjct: 849 PRPPRAV 855
>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)
Query: 2 RPPPPR 7
+PPP R
Sbjct: 241 KPPPDR 246
>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)
Query: 2 RPPPPR 7
+PPP R
Sbjct: 241 KPPPDR 246
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 PPPPRPV 9
P PPR V
Sbjct: 849 PRPPRAV 855
223|Sequence|1111|1120|PRPVAPPTRP
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 PRPVAPPTRP 10
P P PP RP
Sbjct: 724 PTPRGPPDRP 733
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 2 RPVAPPT 8
RP PPT
Sbjct: 246 RPRGPPT 252
>sp|TEG7_HHV11|TEGUMENT protein UL51|Human herpesvirus 1 (strain 17)
Query: 1 PRPVAPPTRP 10
PRP A PT P
Sbjct: 221 PRPTASPTAP 230
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 RPVAPPT 8
RP APP+
Sbjct: 123 RPTAPPS 129
Query: 5 APPTRP 10
APPT P
Sbjct: 659 APPTNP 664
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 RPVAPPT 8
RP APP+
Sbjct: 120 RPTAPPS 126
Query: 5 APPTRP 10
APPT P
Sbjct: 661 APPTNP 666
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 RPVAPPT 8
RP APP+
Sbjct: 123 RPTAPPS 129
Query: 5 APPTRP 10
APPT P
Sbjct: 660 APPTNP 665
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 RPVAPPT 8
RP APP+
Sbjct: 123 RPTAPPS 129
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 RPVAPPT 8
RP APP+
Sbjct: 123 RPAAPPS 129
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 RPVAPPT 8
RP APP+
Sbjct: 123 RPTAPPS 129
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 RPVAPPT 8
RP APP+
Sbjct: 123 RPTAPPS 129
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 RPVAPPT 8
RP APP+
Sbjct: 123 RPTAPPS 129
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 PRPVAPPTRP 10
P P PP P
Sbjct: 561 PMPWGPPLNP 570
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 1 PRPVAPPTR 9
P P PP +
Sbjct: 252 PTPTTPPRK 260
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 2 RPVAPPT 8
+P+A PT
Sbjct: 987 KPIAKPT 993
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PRPVAPP 7
P P APP
Sbjct: 459 PEPTAPP 465
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 RPVAPPT 8
RP APP+
Sbjct: 123 RPTAPPS 129
>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PRPVAPP 7
P P APP
Sbjct: 455 PEPTAPP 461
>sp|HBSAG_HBVF4|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 1 PRPVAPPTR 9
P PV+PP R
Sbjct: 105 PTPVSPPLR 113
>sp|HBSAG_HBVF3|LARGE envelope protein|Hepatitis B virus genotype F1
Query: 1 PRPVAPPTR 9
P PV+PP R
Sbjct: 105 PTPVSPPLR 113
>sp|HBSAG_HBVF1|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 1 PRPVAPPTR 9
P PV+PP R
Sbjct: 105 PTPVSPPLR 113
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 3 PVAPPTRP 10
PVAPP +P
Sbjct: 697 PVAPPEQP 704
>sp|HBSAG_HBVH3|LARGE envelope protein|Hepatitis B virus genotype H
Query: 1 PRPVAPPTR 9
P PV+PP R
Sbjct: 105 PTPVSPPLR 113
>sp|HBSAG_HBVH2|LARGE envelope protein|Hepatitis B virus genotype H
Query: 1 PRPVAPPTR 9
P PV+PP R
Sbjct: 105 PTPVSPPLR 113
>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PRPVAPP 7
P P APP
Sbjct: 453 PEPTAPP 459
>sp|HBSAG_HBVH1|LARGE envelope protein|Hepatitis B virus genotype H
Query: 1 PRPVAPPTR 9
P PV+PP R
Sbjct: 105 PTPVSPPLR 113
>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PRPVAPP 7
P P APP
Sbjct: 454 PEPTAPP 460
>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PRPVAPP 7
P P APP
Sbjct: 448 PEPTAPP 454
>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PRPVAPP 7
P P APP
Sbjct: 455 PEPTAPP 461
>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PRPVAPP 7
P P APP
Sbjct: 452 PEPTAPP 458
>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PRPVAPP 7
P P APP
Sbjct: 452 PEPTAPP 458
>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PRPVAPP 7
P P APP
Sbjct: 451 PEPTAPP 457
>sp|GAG_HV1M2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PRPVAPP 7
P P APP
Sbjct: 452 PEPTAPP 458
>sp|GAG_HV190|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PRPVAPP 7
P P APP
Sbjct: 454 PEPTAPP 460
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 APPTRP 10
APPT P
Sbjct: 661 APPTNP 666
>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PRPVAPP 7
P P APP
Sbjct: 447 PEPTAPP 453
>sp|GAG_HV1N5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PRPVAPP 7
P P APP
Sbjct: 453 PEPTAPP 459
>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PRPVAPP 7
P P APP
Sbjct: 448 PEPTAPP 454
>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PRPVAPP 7
P P APP
Sbjct: 453 PEPTAPP 459
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 PRPVAPPT 8
PRPV PT
Sbjct: 1921 PRPVYSPT 1928
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PRPVAPP 7
P P APP
Sbjct: 453 PEPTAPP 459
>sp|HBSAG_HBVG3|LARGE envelope protein|Hepatitis B virus genotype G
Query: 1 PRPVAPPTR 9
P P++PP R
Sbjct: 104 PTPISPPLR 112
>sp|HBSAG_HBVC9|LARGE envelope protein|Hepatitis B virus genotype C
Query: 1 PRPVAPPTR 9
P P++PP R
Sbjct: 105 PTPISPPLR 113
>sp|HBSAG_HBVA6|LARGE envelope protein|Hepatitis B virus genotype A1
Query: 1 PRPVAPPTR 9
P P++PP R
Sbjct: 94 PTPISPPLR 102
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 APPTRP 10
APPT P
Sbjct: 662 APPTNP 667
>sp|HBSAG_HBVA5|LARGE envelope protein|Hepatitis B virus genotype A1
Query: 1 PRPVAPPTR 9
P P++PP R
Sbjct: 105 PTPISPPLR 113
>sp|HBSAG_HBVA2|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 1 PRPVAPPTR 9
P P++PP R
Sbjct: 94 PTPISPPLR 102
>sp|HBSAG_HBVA1|LARGE envelope protein|Hepatitis B virus genotype A1
Query: 1 PRPVAPPTR 9
P P++PP R
Sbjct: 105 PTPISPPLR 113
>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PRPVAPP 7
P P APP
Sbjct: 452 PEPTAPP 458
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PRPVAPP 7
P P APP
Sbjct: 453 PEPTAPP 459
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PRPVAPP 7
P P APP
Sbjct: 453 PEPTAPP 459
>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PRPVAPP 7
P P APP
Sbjct: 455 PEPTAPP 461
224|Sequence|1116|1125|PPTRPAPPQR
>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 4 RPAPPQR 10
RP+PP R
Sbjct: 31 RPSPPTR 37
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 PPTRPAPPQ 9
PP +P PQ
Sbjct: 1224 PPPKPETPQ 1232
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 1 PPTRPAPPQR 10
P +P+PP R
Sbjct: 45 PRLQPSPPPR 54
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 PPTRPAPPQR 10
P +P+PP R
Sbjct: 45 PRLQPSPPPR 54
>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 4 RPAPPQR 10
RP+PP +
Sbjct: 31 RPSPPTK 37
>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 4 RPAPPQR 10
RP+PP +
Sbjct: 31 RPSPPTK 37
>sp|NSP1_ROTHU|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 4 RPAPPQR 10
RP+PP +
Sbjct: 31 RPSPPTK 37
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 4 RPAPPQR 10
RP+PP +
Sbjct: 31 RPSPPTK 37
>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 4 RPAPPQR 10
RP+PP +
Sbjct: 31 RPSPPTK 37
>sp|NSP1_ROTHJ|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 4 RPAPPQR 10
RP+PP +
Sbjct: 31 RPSPPTK 37
>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 4 RPAPPQR 10
RP+PP +
Sbjct: 31 RPSPPTK 37
>sp|U21_HHV6U|GLYCOPROTEIN U21|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PPTRPAP 7
PP PAP
Sbjct: 20 PPICPAP 26
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 3 TRPAPPQR 10
+RP PP R
Sbjct: 495 SRPGPPDR 502
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 3 TRPAPP 8
TRP PP
Sbjct: 1739 TRPLPP 1744
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 PPTRPAPPQR 10
PP P P +R
Sbjct: 719 PPGAPIPSKR 728
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 PPTRPAPPQR 10
PP P P +R
Sbjct: 725 PPGAPVPEKR 734
>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PTRPAPP 8
P RP PP
Sbjct: 156 PRRPKPP 162
>sp|UL136_HCMVM|PROTEIN UL136|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 TRPAPP 8
TRPAPP
Sbjct: 164 TRPAPP 169
>sp|E321_ADE1A|EARLY E3 20.2 kDa glycoprotein|Human adenovirus B serotype 11
Query: 1 PPTRPAP 7
P T PAP
Sbjct: 99 PSTTPAP 105
>sp|VIF_HV1U4|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PTRPAPP 8
PTR PP
Sbjct: 156 PTRAKPP 162
>sp|E321_ADE1P|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 11
Query: 1 PPTRPAP 7
P T PAP
Sbjct: 99 PSTTPAP 105
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 PPTRPAPPQ 9
P T+P+ PQ
Sbjct: 588 PDTKPSGPQ 596
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PTRPAPPQ 9
P RPAPP+
Sbjct: 553 PVRPAPPK 560
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PTRPAPPQ 9
P RPAPP+
Sbjct: 553 PVRPAPPK 560
>sp|HBZ_HTL1A|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 1 PPTRPAPPQ 9
PP APP+
Sbjct: 65 PPGEKAPPR 73
>sp|UL136_HCMVT|PROTEIN UL136|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 TRPAPP 8
TRPAPP
Sbjct: 164 TRPAPP 169
>sp|VE7_HPV18|PROTEIN E7|Human papillomavirus type 18
Query: 2 PTRPAPPQR 10
P R A PQR
Sbjct: 50 PARRAEPQR 58
>sp|LHDAG_HDVTW|LARGE delta antigen|Hepatitis delta virus genotype II
Query: 1 PPTRPAPPQ 9
P RP+PPQ
Sbjct: 195 PWVRPSPPQ 203
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 PPTRPAPPQR 10
PP P P R
Sbjct: 714 PPGAPVPNSR 723
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 PPTRPAPPQR 10
PP PP R
Sbjct: 469 PPGAGVPPDR 478
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 PPTRPAPP 8
PPT PAP
Sbjct: 25 PPTSPAPS 32
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PPTRPAPP 8
PPT PAP
Sbjct: 25 PPTSPAPS 32
>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)
Query: 1 PPTRPAPPQR 10
PP PAPP++
Sbjct: 513 PPRNPAPPEQ 522
>sp|VE7_HPV45|PROTEIN E7|Human papillomavirus 45
Query: 2 PTRPAPPQR 10
P R A PQR
Sbjct: 51 PARRAEPQR 59
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 PPTRPAPPQR 10
PP P P R
Sbjct: 714 PPGAPIPTTR 723
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 PPTRPAPPQR 10
PP P P R
Sbjct: 719 PPGAPIPKTR 728
225|Sequence|1121|1130|APPQRPPPPS
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 PQRPPPPS 10
P+ PPPP+
Sbjct: 1451 PETPPPPA 1458
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 PQRPPPPS 10
P+ PPPP+
Sbjct: 1441 PETPPPPA 1448
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 PQRPPPPS 10
P+ PPPP+
Sbjct: 1442 PETPPPPA 1449
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 PQRPPPPS 10
P+ PPPP+
Sbjct: 1445 PETPPPPA 1452
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 PQRPPPPS 10
P+ PPPP+
Sbjct: 1442 PETPPPPA 1449
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 PQRPPPPS 10
P+ PPPP+
Sbjct: 1452 PETPPPPA 1459
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 PQRPPPPS 10
P+ PPPP+
Sbjct: 1453 PETPPPPA 1460
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 PQRPPPPS 10
P+ PPPP+
Sbjct: 1440 PETPPPPA 1447
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 PQRPPPPS 10
P+ PPPP+
Sbjct: 1454 PETPPPPA 1461
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 PQRPPPP 9
P+ PPPP
Sbjct: 1459 PETPPPP 1465
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 PQRPPPP 9
P+ PPPP
Sbjct: 1443 PETPPPP 1449
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 3 PQRPPPP 9
P+R PPP
Sbjct: 10 PKRDPPP 16
>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 3 PQRPPPP 9
P+R PPP
Sbjct: 10 PKRDPPP 16
>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 3 PQRPPPP 9
P+R PPP
Sbjct: 10 PKRDPPP 16
>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)
Query: 3 PQRPPPP 9
P+R PPP
Sbjct: 10 PKRDPPP 16
>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PQRPPPP 9
P+R PPP
Sbjct: 10 PKRDPPP 16
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 3 PQRPPPP 9
P+R PPP
Sbjct: 10 PKRDPPP 16
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 PQRPPPPS 10
P PPPP+
Sbjct: 1443 PDTPPPPA 1450
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PQRPPPPS 10
P+R P PS
Sbjct: 656 PRRTPSPS 663
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 APPQRPP 7
+PP+ PP
Sbjct: 235 SPPKLPP 241
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 APPQRPP 7
+PP+ PP
Sbjct: 235 SPPKLPP 241
>sp|UL24_HHV2H|PROTEIN UL24|Human herpesvirus 2 (strain HG52)
Query: 1 APPQRPPPPS 10
A PQRPP P+
Sbjct: 217 ARPQRPPSPT 226
>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 PQRPPPP 9
P+RP PP
Sbjct: 156 PRRPKPP 162
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 APPQRPPP 8
AP Q PP
Sbjct: 1178 APKQEEPP 1185
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 APPQRPPP 8
AP Q PP
Sbjct: 1178 APKQEEPP 1185
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 4 QRPPPPS 10
Q PPPP+
Sbjct: 1429 QSPPPPA 1435
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 1 APPQRPPPPS 10
APP+RP PS
Sbjct: 492 APPERPDSPS 501
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 1 APPQRPPPPS 10
APP+RP PS
Sbjct: 490 APPERPDSPS 499
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 PPQRPP 7
PPQ PP
Sbjct: 529 PPQTPP 534
Query: 4 QRPPPPS 10
+ PPPP+
Sbjct: 1415 KNPPPPA 1421
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 6 PPPP 9
PPPP
Sbjct: 2864 PPPP 2867
Query: 6 PPPP 9
PPPP
Sbjct: 2865 PPPP 2868
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 4 QRPPP 8
Q+PPP
Sbjct: 355 QKPPP 359
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 2 PPQRPPPP 9
P R PPP
Sbjct: 39 PLYREPPP 46
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 5 RPPPPS 10
RPP PS
Sbjct: 29 RPPIPS 34
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 5 RPPPPS 10
+PPPP+
Sbjct: 1419 KPPPPA 1424
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 4 QRPPPP 9
QRP PP
Sbjct: 1583 QRPDPP 1588
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 APPQRPPP 8
+PP+ P P
Sbjct: 681 SPPEIPKP 688
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 1 APPQRPPP 8
P RPPP
Sbjct: 45 GPASRPPP 52
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 APPQRPPP 8
+PP+ P P
Sbjct: 681 SPPEIPKP 688
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 PPPP 9
PPPP
Sbjct: 14 PPPP 17
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 PPPP 9
PPPP
Sbjct: 14 PPPP 17
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 APPQRPPPPS 10
A RP PPS
Sbjct: 1736 ASGTRPLPPS 1745
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 6 PPPPS 10
PPPPS
Sbjct: 418 PPPPS 422
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 6 PPPPS 10
PPPP+
Sbjct: 1424 PPPPA 1428
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 6 PPPPS 10
PPPPS
Sbjct: 512 PPPPS 516
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 PPQRPPPP 9
PPQ P P
Sbjct: 1888 PPQFVPDP 1895
>sp|GE_HHV2H|ENVELOPE glycoprotein E|Human herpesvirus 2 (strain HG52)
Query: 2 PPQRPPPPS 10
PP+RP PS
Sbjct: 486 PPERPDSPS 494
>sp|VIF_HV1MA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 5 RPPPPS 10
RPP PS
Sbjct: 160 RPPLPS 165
>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 RPPPPS 10
RPPPPS
Sbjct: 109 RPPPPS 114
>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 RPPPPS 10
RPPPPS
Sbjct: 109 RPPPPS 114
226|Sequence|1126|1135|PPPPSGARSP
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 PPPPSGARS 9
PPPP G R+
Sbjct: 2864 PPPPPGTRA 2872
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 1 PPPPSGAR 8
PPPP G R
Sbjct: 123 PPPPDGVR 130
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 PPPPSGAR 8
PPPP G R
Sbjct: 123 PPPPDGVR 130
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 PPPPSGAR 8
PPPP G R
Sbjct: 123 PPPPDGVR 130
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 PPPPSGAR 8
P PPSG R
Sbjct: 2895 PEPPSGVR 2902
>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 PPPPSGAR 8
PPPP G R
Sbjct: 123 PPPPDGVR 130
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 PPPPSGAR 8
PPPP G R
Sbjct: 123 PPPPDGVR 130
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 PPPPSGAR 8
PPPP G R
Sbjct: 123 PPPPDGVR 130
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 PPPPSGAR 8
P PP+GA+
Sbjct: 2893 PEPPAGAK 2900
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 PPPPSGAR 8
P PP+GA+
Sbjct: 2893 PEPPAGAK 2900
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 PPPPSGAR 8
P PP+GA+
Sbjct: 2893 PEPPAGAK 2900
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 PPPPSGAR 8
PPPP G R
Sbjct: 123 PPPPDGVR 130
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 PPPPSGAR 8
P PP G R
Sbjct: 2853 PEPPQGTR 2860
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 PPPPSGA 7
P PP+GA
Sbjct: 2873 PEPPAGA 2879
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 3 PPSGARSP 10
PP AR+P
Sbjct: 444 PPVDARNP 451
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 2 PPPSGA 7
PPP+GA
Sbjct: 116 PPPTGA 121
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 2 PPPSGA 7
PPP+GA
Sbjct: 117 PPPTGA 122
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 2 PPPSGA 7
PPP+GA
Sbjct: 117 PPPTGA 122
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 PPPPSGARSP 10
PP P G P
Sbjct: 722 PPVPRGPDRP 731
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 2 PPPSGA 7
PPP+GA
Sbjct: 117 PPPTGA 122
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPSGARSP 10
PPS R+P
Sbjct: 390 PPSSIRNP 397
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PPSGARSP 10
PPS R+P
Sbjct: 390 PPSSIRNP 397
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 PPPPSGARS 9
P PP G ++
Sbjct: 2895 PEPPQGVKT 2903
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 1 PPPPSGA 7
PPPPS +
Sbjct: 418 PPPPSAS 424
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 1 PPPPSGA 7
PPPPS +
Sbjct: 512 PPPPSAS 518
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 PPPPSGAR 8
P PP+G +
Sbjct: 2893 PEPPAGVK 2900
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PPPSGA 7
PPP+G+
Sbjct: 123 PPPTGS 128
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 2 PPPSGA 7
PPP+GA
Sbjct: 112 PPPTGA 117
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 2 PPPSGA 7
PPP+GA
Sbjct: 112 PPPTGA 117
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 1 PPPPSGARSP 10
P PP +SP
Sbjct: 293 PTPPDSIKSP 302
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 PPPSGARS 9
PPPSGA S
Sbjct: 264 PPPSGAAS 271
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 2 PPPSGA 7
PPP+G+
Sbjct: 123 PPPTGS 128
>sp|DUT_HHV11|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 1 (strain 17)
Query: 1 PPPPSGA 7
PPPP+GA
Sbjct: 152 PPPPTGA 158
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 PPPSGARS 9
P P+GARS
Sbjct: 1113 PAPAGARS 1120
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 4 PSGARSP 10
P+GAR P
Sbjct: 715 PTGARKP 721
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 1 PPPPSGARSP 10
PPP R P
Sbjct: 241 PPPCKRPRGP 250
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 1 PPPPSG 6
PPPP G
Sbjct: 417 PPPPQG 422
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PPPSGARSP 10
P P+GAR P
Sbjct: 409 PRPAGAREP 417
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 PPPPSGAR 8
P PP G +
Sbjct: 2894 PEPPEGVK 2901
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 PPPPSGAR 8
P PP G +
Sbjct: 2891 PEPPEGVK 2898
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 PPPPSGAR 8
P PP G +
Sbjct: 2894 PEPPEGVK 2901
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 1 PPPPSG 6
PPPPSG
Sbjct: 419 PPPPSG 424
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 1 PPPPSG 6
PPPPSG
Sbjct: 419 PPPPSG 424
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PPPPSGARSP 10
P PP R P
Sbjct: 218 PAPPGQMREP 227
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 4 PSGARSP 10
PSG R P
Sbjct: 882 PSGMRCP 888
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 2 PPPSG 6
PPP+G
Sbjct: 133 PPPNG 137
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 PPPSGARS 9
P P GARS
Sbjct: 1112 PAPQGARS 1119
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PPPSGARS 9
P P GARS
Sbjct: 1112 PAPQGARS 1119
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 2 PPPSG 6
PPPSG
Sbjct: 599 PPPSG 603
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 1 PPPPSGA 7
PPPPS +
Sbjct: 417 PPPPSAS 423
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 PPPSGARS 9
P P GARS
Sbjct: 1112 PAPQGARS 1119
>sp|VIF_HV2KR|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 PPPSGARSP 10
PP SGA P
Sbjct: 197 PPASGAYFP 205
>sp|K12_HHV8P|PROTEIN K12|Human herpesvirus 8 type P
Query: 3 PPSGARSP 10
PPSG R P
Sbjct: 41 PPSGQRGP 48
>sp|VL1_HPV64|MAJOR capsid protein L1|Human papillomavirus type 64
Query: 2 PPPSG 6
PPPSG
Sbjct: 95 PPPSG 99
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 PPPPSG 6
P PP+G
Sbjct: 2886 PEPPAG 2891
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PPPPSGARSP 10
P PP R P
Sbjct: 222 PIPPGQMREP 231
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 PPPPSG 6
P PP+G
Sbjct: 2888 PEPPTG 2893
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PPPPSGARSP 10
P PP R P
Sbjct: 228 PIPPGQMREP 237
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PPPPSGARSP 10
P PP R P
Sbjct: 222 PIPPGQMREP 231
>sp|US33_HCMVA|UNCHARACTERIZED protein HHLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PPPPSGARSP 10
P P G RSP
Sbjct: 121 PETPVGTRSP 130
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PPPPSGARSP 10
P PP R P
Sbjct: 218 PIPPGQMREP 227
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 1 PPPPSGARSP 10
PPP S R+P
Sbjct: 450 PPPDSTVRAP 459
227|Sequence|1131|1140|GARSPAPTRK
>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)
Query: 1 GARSPAP 7
G RSP P
Sbjct: 310 GGRSPRP 316
>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)
Query: 1 GARSPAP 7
G RSP P
Sbjct: 310 GGRSPRP 316
>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)
Query: 1 GARSPAP 7
G RSP P
Sbjct: 312 GGRSPRP 318
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 GARSPAP 7
GARSP P
Sbjct: 585 GARSPVP 591
>sp|EBNA5_EBVG|EPSTEIN-BARR nuclear antigen leader protein|Epstein-Barr virus (strain GD1)
Query: 3 RSPAPTR 9
RSP+PTR
Sbjct: 32 RSPSPTR 38
Query: 3 RSPAPTR 9
RSP+PTR
Sbjct: 98 RSPSPTR 104
Query: 3 RSPAPTR 9
RSP+PTR
Sbjct: 164 RSPSPTR 170
Query: 3 RSPAPTR 9
RSP+PTR
Sbjct: 230 RSPSPTR 236
Query: 3 RSPAPTR 9
RSP+PTR
Sbjct: 296 RSPSPTR 302
Query: 3 RSPAPTR 9
RSP+PTR
Sbjct: 362 RSPSPTR 368
Query: 3 RSPAPTR 9
RSP+PTR
Sbjct: 428 RSPSPTR 434
>sp|EBNA5_EBVB9|EPSTEIN-BARR nuclear antigen leader protein|Epstein-Barr virus (strain B95-8)
Query: 3 RSPAPTR 9
RSP+PTR
Sbjct: 32 RSPSPTR 38
Query: 3 RSPAPTR 9
RSP+PTR
Sbjct: 98 RSPSPTR 104
Query: 3 RSPAPTR 9
RSP+PTR
Sbjct: 164 RSPSPTR 170
Query: 3 RSPAPTR 9
RSP+PTR
Sbjct: 230 RSPSPTR 236
Query: 3 RSPAPTR 9
RSP+PTR
Sbjct: 296 RSPSPTR 302
Query: 3 RSPAPTR 9
RSP+PTR
Sbjct: 362 RSPSPTR 368
Query: 3 RSPAPTR 9
RSP+PTR
Sbjct: 428 RSPSPTR 434
>sp|EBNA5_EBVA8|EPSTEIN-BARR nuclear antigen leader protein|Epstein-Barr virus (strain AG876)
Query: 3 RSPAPTR 9
RSP+PTR
Sbjct: 32 RSPSPTR 38
Query: 3 RSPAPTR 9
RSP+PTR
Sbjct: 98 RSPSPTR 104
Query: 3 RSPAPTR 9
RSP+PTR
Sbjct: 164 RSPSPTR 170
Query: 3 RSPAPTR 9
RSP+PTR
Sbjct: 230 RSPSPTR 236
Query: 3 RSPAPTR 9
RSP+PTR
Sbjct: 296 RSPSPTR 302
Query: 3 RSPAPTR 9
RSP+PTR
Sbjct: 362 RSPSPTR 368
Query: 3 RSPAPTR 9
RSP+PTR
Sbjct: 428 RSPSPTR 434
>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2
Query: 2 ARSPAPT 8
AR PAPT
Sbjct: 506 ARPPAPT 512
>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5
Query: 2 ARSPAPT 8
AR PAPT
Sbjct: 506 ARPPAPT 512
>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49
Query: 3 RSPAPTRK 10
+ PAP RK
Sbjct: 442 KQPAPERK 449
>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)
Query: 1 GARSPAP 7
GAR PAP
Sbjct: 676 GARDPAP 682
>sp|VE4_HPV41|PROTEIN E4|Human papillomavirus type 41
Query: 1 GARSPAP 7
G+RSP P
Sbjct: 32 GSRSPQP 38
>sp|US20_HCMVT|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 SPAPTR 9
SP PTR
Sbjct: 62 SPCPTR 67
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GARSPAPT 8
GAR P P+
Sbjct: 413 GAREPGPS 420
>sp|US20_HCMVA|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 SPAPTR 9
SP PTR
Sbjct: 62 SPCPTR 67
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 4 SPAPTRK 10
+PAPT+K
Sbjct: 433 APAPTKK 439
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 3 RSPAPTRK 10
R+P P RK
Sbjct: 536 RTPLPERK 543
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 GARSPAPTR 9
A+SP PTR
Sbjct: 314 AAQSPPPTR 322
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 PAPTRK 10
PAP+RK
Sbjct: 329 PAPSRK 334
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 5 PAPTRK 10
P PTRK
Sbjct: 255 PRPTRK 260
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 3 RSPAPT 8
+SPAPT
Sbjct: 458 KSPAPT 463
>sp|RUVV_VARV|RESOLVASE OPG149|Variola virus
Query: 1 GARSPAPT 8
GA++PA T
Sbjct: 32 GAKNPART 39
>sp|RUVV_VAR67|RESOLVASE OPG149|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 GARSPAPT 8
GA++PA T
Sbjct: 32 GAKNPART 39
228|Sequence|1136|1145|APTRKEFGGI
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 2 PTRKEFGGI 10
P RK+ GGI
Sbjct: 1709 PYRKQSGGI 1717
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 APTRKEFGGI 10
AP EFGG+
Sbjct: 308 APMCSEFGGL 317
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 1 APTRKEFG 8
+PTR+ FG
Sbjct: 248 SPTRRPFG 255
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 1 APTRKEFG 8
+PTR+ FG
Sbjct: 248 SPTRRPFG 255
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 1 APTRKEFG 8
+PTR+ FG
Sbjct: 248 SPTRRPFG 255
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 1 APTRKEFG 8
+PTR+ FG
Sbjct: 248 SPTRRPFG 255
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 PTRKEFGG 9
PT K FGG
Sbjct: 774 PTLKYFGG 781
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 1 APTRKEFGGI 10
APTR+E I
Sbjct: 781 APTREEIKNI 790
>sp|M2_I18A0|MATRIX protein 2|Influenza A virus (strain A/Brevig
Query: 2 PTRKEFG 8
PTR E+G
Sbjct: 10 PTRNEWG 16
>sp|M2_I61A1|MATRIX protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 PTRKEFG 8
PTR E+G
Sbjct: 10 PTRSEWG 16
>sp|M2_I30A0|MATRIX protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 PTRKEFG 8
PTR E+G
Sbjct: 10 PTRNEWG 16
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 2 PTRKEF 7
P RKEF
Sbjct: 244 PERKEF 249
Query: 1 APTRKEF 7
APT K+F
Sbjct: 117 APTMKDF 123
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PTRKEF 7
P RKEF
Sbjct: 244 PERKEF 249
Query: 1 APTRKEF 7
APT K+F
Sbjct: 117 APTMKDF 123
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 2 PTRKEFGGI 10
PTR EF +
Sbjct: 48 PTRAEFSTV 56
>sp|SCAF_HHV8P|CAPSID scaffolding protein|Human herpesvirus 8 type P
Query: 2 PTRKEFGG 9
PT KE GG
Sbjct: 417 PTMKEHGG 424
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 PTRKEFGG 9
P K+FGG
Sbjct: 792 PPIKDFGG 799
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 APTRKEFG 8
APT+ FG
Sbjct: 819 APTKVTFG 826
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 APTRKEFG 8
APT+ FG
Sbjct: 819 APTKVTFG 826
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 2 PTRKEFGG 9
P R+ FGG
Sbjct: 31 PERRIFGG 38
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 2 PTRKEFGG 9
P R+ FGG
Sbjct: 31 PERRIFGG 38
>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 APTRKEFG 8
AP R+E G
Sbjct: 242 APLREELG 249
>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 APTRKEFG 8
AP R+E G
Sbjct: 242 APLREELG 249
229|Sequence|1141|1150|EFGGIGAPPS
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 4 GIGAPPS 10
G+G PPS
Sbjct: 797 GLGDPPS 803
>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)
Query: 2 FGGIGAP 8
FG +GAP
Sbjct: 324 FGSVGAP 330
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 3 GGIGAPPS 10
GG APP+
Sbjct: 121 GGARAPPN 128
>sp|UL59_HCMVA|UNCHARACTERIZED protein UL59|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 FGGIGAPP 9
F G+ +PP
Sbjct: 30 FDGVRSPP 37
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GGIGAPP 9
GG G PP
Sbjct: 377 GGYGCPP 383
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 GGIGAPPS 10
GG+ +PP+
Sbjct: 428 GGLTSPPT 435
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 GGIGAPPS 10
GG+ +PP+
Sbjct: 428 GGLTSPPT 435
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 GGIGAPPS 10
GG+ +PP+
Sbjct: 428 GGLTSPPT 435
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 3 GGIGAP 8
GGI AP
Sbjct: 2522 GGIAAP 2527
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 FGGIGAPPS 10
GG +PPS
Sbjct: 35 LGGGASPPS 43
230|Sequence|1146|1155|GAPPSPGVAR
>sp|NEC1_HCMVM|NUCLEAR egress protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GAPPSPGVAR 10
G PPSP AR
Sbjct: 47 GEPPSPADAR 56
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 3 PPSPGVAR 10
PP+P VAR
Sbjct: 14 PPTPPVAR 21
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 3 PPSPGVAR 10
PP+P VAR
Sbjct: 14 PPTPPVAR 21
>sp|NEC1_HCMVA|NUCLEAR egress protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GAPPSPGVAR 10
G PPSP AR
Sbjct: 47 GEPPSPADAR 56
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 3 PPSPGVAR 10
PP+P VAR
Sbjct: 14 PPTPPVAR 21
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 3 PPSPGVAR 10
PP+P VAR
Sbjct: 14 PPTPPVAR 21
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 3 PPSPGVAR 10
PP+P VAR
Sbjct: 14 PPTPPVAR 21
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 3 PPSPGVAR 10
PP+P VAR
Sbjct: 14 PPTPPVAR 21
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 APPSPGV 8
+PPSPG+
Sbjct: 106 SPPSPGL 112
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 APPSPGV 8
+PPSPG+
Sbjct: 106 SPPSPGL 112
>sp|VP30_EBOSU|TRANSCRIPTIONAL activator VP30|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 GAPPSPG 7
G PP+PG
Sbjct: 272 GLPPAPG 278
>sp|F_HCV1|F protein|Hepatitis C virus genotype 1a
Query: 1 GAPPSPGVAR 10
GAP +PGV R
Sbjct: 108 GAPQTPGVGR 117
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 PPSPGVAR 10
PPS G+A+
Sbjct: 1955 PPSDGIAQ 1962
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 PPSPGVAR 10
PPS G+A+
Sbjct: 1955 PPSDGIAQ 1962
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 PPSPGVAR 10
PPS G+A+
Sbjct: 1955 PPSDGIAQ 1962
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 APPSPG 7
APPSP
Sbjct: 581 APPSPA 586
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 PPSPGVAR 10
PPS G+A+
Sbjct: 1955 PPSDGIAQ 1962
>sp|F_HCV77|F protein|Hepatitis C virus genotype 1a
Query: 1 GAPPSPGVAR 10
GAP +PGV R
Sbjct: 108 GAPQTPGVGR 117
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 1 GAPPSPGVAR 10
GAPP+P VA
Sbjct: 515 GAPPTPEVAE 524
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 APPSPG 7
APP PG
Sbjct: 443 APPIPG 448
>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 GAPPSPGV 8
G+P +PGV
Sbjct: 341 GSPGAPGV 348
>sp|NS1_INBPA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/PA/1979)
Query: 3 PPSPG 7
PP+PG
Sbjct: 122 PPTPG 126
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 PPSPG 7
PP+PG
Sbjct: 363 PPNPG 367
>sp|NS1_INBSI|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/222/1979)
Query: 3 PPSPG 7
PP+PG
Sbjct: 122 PPTPG 126
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 1 GAPPSPGV 8
G+P +PG+
Sbjct: 340 GSPGAPGI 347
>sp|UL24_HHV2H|PROTEIN UL24|Human herpesvirus 2 (strain HG52)
Query: 3 PPSPGV 8
PPSPGV
Sbjct: 243 PPSPGV 248
>sp|VIF_HV1MV|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 PPSPGVAR 10
PP P V R
Sbjct: 161 PPLPSVQR 168
>sp|NS1_INBSJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/1964)
Query: 3 PPSPG 7
PP+PG
Sbjct: 122 PPTPG 126
>sp|NS1_INBHT|NON-STRUCTURAL protein 1|Influenza B virus (strain B/HT/1984)
Query: 3 PPSPG 7
PP+PG
Sbjct: 122 PPTPG 126
>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PPSPG 7
PP+PG
Sbjct: 321 PPAPG 325
>sp|NS1_INBVJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Victoria/1987)
Query: 3 PPSPG 7
PP+PG
Sbjct: 122 PPTPG 126
>sp|NS1_INBRU|NON-STRUCTURAL protein 1|Influenza B virus (strain B/RU/1969)
Query: 3 PPSPG 7
PP+PG
Sbjct: 122 PPTPG 126
>sp|NS1_INBMD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Maryland/1959)
Query: 3 PPSPG 7
PP+PG
Sbjct: 122 PPTPG 126
>sp|NS1_INBAD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Ann
Query: 3 PPSPG 7
PP+PG
Sbjct: 122 PPTPG 126
>sp|NS1_INBAC|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Ann
Query: 3 PPSPG 7
PP+PG
Sbjct: 122 PPTPG 126
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 1 GAPPSPGV 8
G+P +PGV
Sbjct: 342 GSPGAPGV 349
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 1 GAPPSPGV 8
G+P +PGV
Sbjct: 342 GSPGAPGV 349
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 3 PPSPGVAR 10
PPS VAR
Sbjct: 14 PPSTPVAR 21
>sp|NS1_INBLE|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Lee/1940)
Query: 3 PPSPG 7
PP+PG
Sbjct: 122 PPTPG 126
>sp|NS1_INBHK|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Hong
Query: 3 PPSPG 7
PP+PG
Sbjct: 122 PPTPG 126
>sp|NS1_INBBA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/BA/1978)
Query: 3 PPSPG 7
PP+PG
Sbjct: 122 PPTPG 126
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GAPPSPG 7
GAPP PG
Sbjct: 666 GAPPMPG 672
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 GAPPSPG 7
GAPP PG
Sbjct: 667 GAPPMPG 673
>sp|NS1_INB|NON-STRUCTURAL protein 1|Influenza B virus (strain B/ID/1986)
Query: 3 PPSPG 7
PP+PG
Sbjct: 122 PPTPG 126
>sp|NS1_INBGA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GA/1986)
Query: 3 PPSPG 7
PP+PG
Sbjct: 122 PPTPG 126
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GAPPSPG 7
GAPP PG
Sbjct: 663 GAPPMPG 669
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 1 GAPPSPGV 8
G+P +PG+
Sbjct: 340 GSPGAPGI 347
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 4 PSPGVA 9
P PGVA
Sbjct: 838 PGPGVA 843
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 4 PSPGVA 9
P PGVA
Sbjct: 838 PGPGVA 843
>sp|NS1_INBGL|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GL/1954)
Query: 3 PPSPG 7
PP+PG
Sbjct: 122 PPTPG 126
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 3 PPSPGVAR 10
PPS VAR
Sbjct: 14 PPSTPVAR 21
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 3 PPSPGVAR 10
PPS VAR
Sbjct: 14 PPSTPVAR 21
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 3 PPSPGVAR 10
PPS VAR
Sbjct: 14 PPSTPVAR 21
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 3 PPSPGVAR 10
PPS VAR
Sbjct: 14 PPSTPVAR 21
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 4 PSPGVAR 10
P+PGV+R
Sbjct: 215 PTPGVSR 221
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 3 PPSPGVAR 10
PPS VAR
Sbjct: 14 PPSTPVAR 21
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 3 PPSPGVAR 10
PPS VAR
Sbjct: 14 PPSTPVAR 21
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 3 PPSPGVAR 10
PPS VAR
Sbjct: 43 PPSTPVAR 50
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain Dumas)
Query: 3 PPSPGVAR 10
PPSPG +R
Sbjct: 108 PPSPGPSR 115
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 GAPPSPGV 8
G PP P V
Sbjct: 1264 GKPPKPSV 1271
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 3 PPSPGVAR 10
PPS VAR
Sbjct: 14 PPSAPVAR 21
>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49
Query: 3 PPSPGVAR 10
PPS VAR
Sbjct: 15 PPSTPVAR 22
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 3 PPSPGVAR 10
PPS VAR
Sbjct: 14 PPSTPVAR 21
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 3 PPSPGVAR 10
PPS VAR
Sbjct: 14 PPSTPVAR 21
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 3 PPSPGVAR 10
PPS VAR
Sbjct: 14 PPSTPVAR 21
>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 APPSP 6
APPSP
Sbjct: 387 APPSP 391
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 1 GAPPSPG 7
AP SPG
Sbjct: 29 AAPSSPG 35
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 3 PPSPGVAR 10
PPS VAR
Sbjct: 14 PPSTPVAR 21
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 1 GAPPSPG 7
AP SPG
Sbjct: 30 AAPSSPG 36
>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 APPSP 6
APPSP
Sbjct: 387 APPSP 391
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PPSPGV 8
PP+PGV
Sbjct: 1151 PPAPGV 1156
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PPSPGV 8
PP+PGV
Sbjct: 1151 PPAPGV 1156
>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)
Query: 3 PPSPGVA 9
PPSPG A
Sbjct: 58 PPSPGEA 64
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PPSPGV 8
PP+PGV
Sbjct: 1151 PPAPGV 1156
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 3 PPSPGVAR 10
PPS VAR
Sbjct: 14 PPSKPVAR 21
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 1 GAPPSPG 7
AP SPG
Sbjct: 30 AAPSSPG 36
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 1 GAPPSPG 7
AP SPG
Sbjct: 30 AAPTSPG 36
231|Sequence|1151|1160|PGVARREMEA
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 PGVARREMEA 10
P V RRE+ +
Sbjct: 1066 PSVVRREVRS 1075
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PGVARRE 7
P V+RRE
Sbjct: 1072 PNVSRRE 1078
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PGVARRE 7
P V+RRE
Sbjct: 1072 PNVSRRE 1078
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PGVARRE 7
P V+RRE
Sbjct: 1072 PNVSRRE 1078
232|Sequence|1156|1165|REMEAPKSPG
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 MEAPKSPG 10
+EAP SPG
Sbjct: 523 LEAPTSPG 530
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 MEAPKSPG 10
+EAP SPG
Sbjct: 523 LEAPTSPG 530
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 4 EAPKSPG 10
E PKSPG
Sbjct: 113 EMPKSPG 119
>sp|UL127_HCMVA|UNCHARACTERIZED protein UL127|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 REMEAPKSP 9
R E+PKSP
Sbjct: 27 RHTESPKSP 35
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 APKSPG 10
APK+PG
Sbjct: 322 APKNPG 327
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 5 APKSPG 10
APK+PG
Sbjct: 322 APKNPG 327
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 APKSPG 10
APK+PG
Sbjct: 322 APKNPG 327
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 APKSPG 10
APK+PG
Sbjct: 322 APKNPG 327
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 APKSPG 10
APK+PG
Sbjct: 322 APKNPG 327
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 APKSPG 10
APK+PG
Sbjct: 322 APKNPG 327
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 REMEAPKSPG 10
R+M +SPG
Sbjct: 563 RDMNVKESPG 572
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 REMEAPKSPG 10
R+M +SPG
Sbjct: 563 RDMNVKESPG 572
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 REMEAPKSPG 10
R+M +SPG
Sbjct: 562 RDMNVKESPG 571
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 5 APKSPG 10
APK+PG
Sbjct: 322 APKNPG 327
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 5 APKSPG 10
AP+SPG
Sbjct: 329 APRSPG 334
>sp|M21_HRSVB|PROTEIN M2-1|Human respiratory syncytial virus B
Query: 1 REMEAPKSP 9
R+ E P SP
Sbjct: 115 RDNEEPNSP 123
>sp|NEC1_HHV8P|NUCLEAR egress protein 1|Human herpesvirus 8 type P
Query: 1 REMEAP 6
REME P
Sbjct: 76 REMETP 81
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 5 APKSPG 10
AP SPG
Sbjct: 30 APSSPG 35
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 5 APKSPG 10
AP SPG
Sbjct: 31 APSSPG 36
233|Sequence|1161|1170|PKSPGTTRKD
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 1 PKSPGTT 7
PKSPG T
Sbjct: 115 PKSPGET 121
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 PKSPGT 6
PK+PGT
Sbjct: 323 PKNPGT 328
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 PKSPGT 6
PK+PGT
Sbjct: 323 PKNPGT 328
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 PKSPGT 6
PK+PGT
Sbjct: 323 PKNPGT 328
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 PKSPGT 6
PK+PGT
Sbjct: 323 PKNPGT 328
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 KSPGTTRKD 10
+SPG RK+
Sbjct: 2053 RSPGGQRKE 2061
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 PKSPGTTRKD 10
P S G+T K+
Sbjct: 4 PNSKGSTSKE 13
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 PKSPGT 6
PK+PGT
Sbjct: 323 PKNPGT 328
>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 KSPGTTRK 9
K+P TTRK
Sbjct: 50 KNPKTTRK 57
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 1 PKSPGT 6
PK+PGT
Sbjct: 323 PKNPGT 328
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 PKSPGT 6
PK+PGT
Sbjct: 323 PKNPGT 328
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 SPGTTRKD 10
SPG R+D
Sbjct: 505 SPGRVRRD 512
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 3 SPGTTRKD 10
SPG R+D
Sbjct: 504 SPGRVRRD 511
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 1 PKSPGT 6
P SPGT
Sbjct: 31 PSSPGT 36
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 1 PKSPGT 6
P SPGT
Sbjct: 32 PSSPGT 37
234|Sequence|1166|1175|TTRKDNIGRS
***** No hits found ******
235|Sequence|1171|1180|NIGRSQPSPQ
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 NIGRSQPSPQ 10
+IG S PSP+
Sbjct: 2673 DIGESSPSPE 2682
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 NIGRSQPSPQ 10
+IG S PSP+
Sbjct: 2673 DIGESSPSPE 2682
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 NIGRSQPSPQ 10
+IG S PSP+
Sbjct: 2673 DIGESSPSPE 2682
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 NIGRSQPSPQ 10
+IG S PSP+
Sbjct: 2673 DIGESSPSPE 2682
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 NIGRSQPSP 9
+IG S PSP
Sbjct: 2667 DIGESSPSP 2675
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 NIGRSQPSP 9
+IG S PSP
Sbjct: 2636 DIGESSPSP 2644
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 NIGRSQPSP 9
+IG S PSP
Sbjct: 2636 DIGESSPSP 2644
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 NIGRSQPSP 9
+IG S PSP
Sbjct: 2636 DIGESSPSP 2644
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 NIGRSQPSP 9
+IG S PSP
Sbjct: 2636 DIGESSPSP 2644
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 NIGRSQPSP 9
+IG S PSP
Sbjct: 2637 DIGESSPSP 2645
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 NIGRSQPSP 9
+IG S PSP
Sbjct: 2636 DIGESSPSP 2644
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 NIGRSQPSPQ 10
+IG S P P+
Sbjct: 2658 DIGESSPDPE 2667
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 NIGRSQPSP 9
+IG S P+P
Sbjct: 2638 DIGESSPNP 2646
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 NIGRSQPSP 9
+IG S P+P
Sbjct: 2639 DIGESSPNP 2647
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 NIGRSQPSP 9
+IG S P+P
Sbjct: 2639 DIGESSPNP 2647
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 NIGRSQPSP 9
+IG S P+P
Sbjct: 2637 DIGESSPNP 2645
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 NIGRSQPSP 9
+IG S P+P
Sbjct: 2637 DIGESSPNP 2645
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 NIGRSQPSP 9
+IG S P+P
Sbjct: 2634 DIGESSPNP 2642
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 NIGRSQPSP 9
+IG S P+P
Sbjct: 2637 DIGESSPNP 2645
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 NIGRSQPSP 9
+IG S P+P
Sbjct: 2637 DIGESSPNP 2645
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 3 GRSQPSPQ 10
G +QP+PQ
Sbjct: 834 GSNQPNPQ 841
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 3 GRSQPSPQ 10
G +QP+PQ
Sbjct: 834 GSNQPNPQ 841
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 3 GRSQPSPQ 10
G +QP+PQ
Sbjct: 834 GSNQPNPQ 841
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 NIGRSQPSP 9
+IG S P+P
Sbjct: 2637 DIGESSPNP 2645
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 3 GRSQPSPQ 10
G +QP+PQ
Sbjct: 834 GSNQPNPQ 841
>sp|US19_HCMVM|TRANSMEMBRANE protein US19|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 QPSPQ 10
QPSPQ
Sbjct: 117 QPSPQ 121
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 3 GRSQPSPQ 10
G +QP+PQ
Sbjct: 834 GSNQPNPQ 841
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 NIGRSQPSP 9
+IG S P P
Sbjct: 2659 DIGESSPDP 2667
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 NIGRSQPSP 9
+IG S P P
Sbjct: 2659 DIGESNPDP 2667
>sp|US19_HCMVT|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 6 QPSPQ 10
QPSPQ
Sbjct: 117 QPSPQ 121
>sp|US19_HCMVA|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 QPSPQ 10
QPSPQ
Sbjct: 117 QPSPQ 121
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 GRSQPSPQ 10
G+S+P P+
Sbjct: 1815 GKSEPFPE 1822
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 GRSQPSPQ 10
G+S+P P+
Sbjct: 1815 GKSEPFPE 1822
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 GRSQPSPQ 10
G+S+P P+
Sbjct: 1815 GKSEPFPE 1822
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 GRSQPSPQ 10
G+S+P P+
Sbjct: 1815 GKSEPFPE 1822
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 GRSQPSPQ 10
G+S+P P+
Sbjct: 1815 GKSEPFPE 1822
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 GRSQPSPQ 10
G+S+P P+
Sbjct: 1815 GKSEPFPE 1822
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 GRSQPSPQ 10
G+S+P P+
Sbjct: 1815 GKSEPFPE 1822
>sp|IR04_HCMVA|UNCHARACTERIZED protein IRL4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NIGRSQPSP 9
N+G S PSP
Sbjct: 70 NLGLSFPSP 78
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 2 IGRSQPSP 9
+GRS P+P
Sbjct: 422 LGRSIPTP 429
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 IGRSQPSP 9
IGR+ P P
Sbjct: 57 IGRTTPEP 64
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 5 SQPSPQ 10
SQP PQ
Sbjct: 597 SQPKPQ 602
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 NIGRSQPSPQ 10
+IG S PS +
Sbjct: 2675 DIGESSPSAE 2684
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 NIGRSQPSP 9
+IG++QP+P
Sbjct: 1681 HIGQTQPAP 1689
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 5 SQPSPQ 10
S PSPQ
Sbjct: 76 SDPSPQ 81
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 NIGRSQPSP 9
N GR P P
Sbjct: 820 NSGRKGPGP 828
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NIGRSQPSP 9
N GR P P
Sbjct: 820 NSGRKGPGP 828
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NIGRSQPSP 9
N GR P P
Sbjct: 819 NSGRKGPGP 827
>sp|UL141_HCMVM|PROTEIN UL141|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 RSQPSP 9
RSQP P
Sbjct: 249 RSQPHP 254
236|Sequence|1176|1185|QPSPQAGLAG
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PSPQAGLAG 10
P PQ G+ G
Sbjct: 510 PDPQVGIKG 518
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 QPSPQAG 7
+PSPQ G
Sbjct: 3095 RPSPQGG 3101
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 1 QPSPQAGLA 9
QP PQ G A
Sbjct: 184 QPEPQVGNA 192
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 1 QPSPQAGLAG 10
+PSPQ +G
Sbjct: 444 EPSPQPDQSG 453
>sp|US19_HCMVM|TRANSMEMBRANE protein US19|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QPSPQA 6
QPSPQA
Sbjct: 117 QPSPQA 122
>sp|US19_HCMVT|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 QPSPQA 6
QPSPQA
Sbjct: 117 QPSPQA 122
>sp|US19_HCMVA|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QPSPQA 6
QPSPQA
Sbjct: 117 QPSPQA 122
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 1 QPSPQAG 7
QP PQ G
Sbjct: 187 QPEPQVG 193
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 1 QPSPQAG 7
QP PQ G
Sbjct: 180 QPEPQVG 186
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 1 QPSPQAG 7
QP PQ G
Sbjct: 188 QPEPQVG 194
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 1 QPSPQAG 7
QP PQ G
Sbjct: 190 QPEPQVG 196
>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PSPQAGLAG 10
P PQ G+ G
Sbjct: 20 PDPQVGIKG 28
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 1 QPSPQAG 7
QP PQ G
Sbjct: 177 QPEPQVG 183
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 1 QPSPQAG 7
QP PQ G
Sbjct: 178 QPEPQVG 184
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 1 QPSPQAG 7
QP PQ G
Sbjct: 201 QPEPQIG 207
>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31
Query: 1 QPSPQAG 7
QP PQ G
Sbjct: 81 QPEPQVG 87
>sp|CAPSH_ADE04|HEXON protein|Human adenovirus E serotype 4
Query: 1 QPSPQAG 7
QP PQ G
Sbjct: 83 QPEPQVG 89
>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6
Query: 1 QPSPQAG 7
QP PQ G
Sbjct: 91 QPEPQVG 97
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PSPQAGL 8
P PQ G+
Sbjct: 510 PDPQVGI 516
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PSPQAGL 8
P PQ G+
Sbjct: 510 PDPQVGI 516
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PSPQAGL 8
P PQ G+
Sbjct: 510 PDPQVGI 516
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PSPQAGL 8
P PQ G+
Sbjct: 510 PDPQVGI 516
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PSPQAGL 8
P PQ G+
Sbjct: 510 PDPQVGI 516
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PSPQAGL 8
P PQ G+
Sbjct: 510 PDPQVGI 516
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PSPQAGL 8
P PQ G+
Sbjct: 510 PDPQVGI 516
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PSPQAGL 8
P PQ G+
Sbjct: 510 PDPQVGI 516
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PSPQAGL 8
P PQ G+
Sbjct: 510 PDPQVGI 516
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 1 QPSPQAG 7
QP PQ G
Sbjct: 212 QPEPQIG 218
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 PSPQAG 7
PSP+AG
Sbjct: 5 PSPRAG 10
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 PSPQAGL 8
P PQAGL
Sbjct: 2966 PLPQAGL 2972
>sp|CAPSH_ADE01|HEXON protein|Human adenovirus C serotype 1
Query: 1 QPSPQAG 7
QP PQ G
Sbjct: 94 QPEPQVG 100
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 1 QPSPQAG 7
QP PQ G
Sbjct: 119 QPEPQIG 125
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 2 PSPQAGLAG 10
PSP A LAG
Sbjct: 650 PSPPAPLAG 658
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 2 PSPQAGLAG 10
PSP A LAG
Sbjct: 649 PSPPAPLAG 657
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PSPQAGL 8
P PQ G+
Sbjct: 510 PDPQVGI 516
>sp|DUT_HHV2H|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 2 (strain
Query: 2 PSPQAGL 8
PSP AGL
Sbjct: 152 PSPLAGL 158
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PSPQAGL 8
P PQ G+
Sbjct: 489 PDPQVGI 495
237|Sequence|1181|1190|AGLAGPGPAG
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 4 AGPGPAG 10
AGPGPA
Sbjct: 153 AGPGPAA 159
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 4 AGPGPAG 10
AGPGPA
Sbjct: 153 AGPGPAA 159
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 4 AGPGPAG 10
AGPGPA
Sbjct: 153 AGPGPAA 159
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 1 AGLAGPGP 8
AG GPGP
Sbjct: 607 AGANGPGP 614
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 AGLAGPGP 8
+G GPGP
Sbjct: 821 SGRKGPGP 828
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AGLAGPGP 8
+G GPGP
Sbjct: 821 SGRKGPGP 828
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 AGLAGPGP 8
+G GPGP
Sbjct: 820 SGRKGPGP 827
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 AGLAGPGPAG 10
AGL+ PG G
Sbjct: 959 AGLSEPGDCG 968
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 5 GPGPA 9
GPGPA
Sbjct: 202 GPGPA 206
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 AGPGPAG 10
AGP P G
Sbjct: 216 AGPAPPG 222
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 GPGPAG 10
GP PAG
Sbjct: 448 GPNPAG 453
Query: 3 LAGPGPAG 10
+ GP PAG
Sbjct: 220 IPGPLPAG 227
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 GPGPAG 10
GP PAG
Sbjct: 446 GPSPAG 451
Query: 3 LAGPGPAG 10
+ GP PAG
Sbjct: 218 IPGPLPAG 225
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 6 PGPAG 10
PGP+G
Sbjct: 70 PGPSG 74
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 6 PGPAG 10
PGP+G
Sbjct: 69 PGPSG 73
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AGLAGPGPA 9
A +A PGP+
Sbjct: 572 AVVAAPGPS 580
>sp|VE2_HPV65|REGULATORY protein E2|Human papillomavirus 65
Query: 4 AGPGPA 9
+GPGP
Sbjct: 264 SGPGPG 269
>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7
Query: 6 PGPAG 10
PGP+G
Sbjct: 70 PGPSG 74
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 3 LAGPGPA 9
LAGPG +
Sbjct: 388 LAGPGAS 394
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 LAGPGPA 9
LAGPG +
Sbjct: 385 LAGPGAS 391
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 AGLAGPGPA 9
A +A PGP+
Sbjct: 572 AVVAAPGPS 580
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 AGLAGP 6
AGLAGP
Sbjct: 1024 AGLAGP 1029
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 LAGPGPA 9
LAGPG +
Sbjct: 386 LAGPGAS 392
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 3 LAGPG 7
LAGPG
Sbjct: 392 LAGPG 396
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 3 LAGPG 7
LAGPG
Sbjct: 392 LAGPG 396
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 LAGPG 7
LAGPG
Sbjct: 392 LAGPG 396
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GLAGPGPAG 10
G G GP G
Sbjct: 415 GTGGDGPEG 423
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GLAGPGPAG 10
G G GP G
Sbjct: 415 GTGGDGPEG 423
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 LAGPG 7
LAGPG
Sbjct: 392 LAGPG 396
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 GPGPAG 10
GP PAG
Sbjct: 217 GPMPAG 222
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 GPGPAG 10
GP PAG
Sbjct: 217 GPMPAG 222
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 2 GLAGPGPAG 10
G+A P PA
Sbjct: 59 GVATPAPAA 67
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 LAGPGPAG 10
+ GP PAG
Sbjct: 220 IPGPLPAG 227
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 LAGPGPAG 10
+ GP PAG
Sbjct: 220 IPGPLPAG 227
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 LAGPGPAG 10
+ GP PAG
Sbjct: 221 IPGPLPAG 228
>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 AGPGPAG 10
AGP P G
Sbjct: 216 AGPAPPG 222
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 LAGPGPAG 10
+ GP PAG
Sbjct: 215 IPGPLPAG 222
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 LAGPGPAG 10
+ GP PAG
Sbjct: 220 IPGPLPAG 227
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 LAGPGPAG 10
+ GP PAG
Sbjct: 220 IPGPLPAG 227
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 AGLAGPGP 8
AG+ PGP
Sbjct: 875 AGMRAPGP 882
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 AGLAGPGP 8
AG+ PGP
Sbjct: 875 AGMRAPGP 882
238|Sequence|1186|1195|PGPAGYSTAR
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 PGPAGYSTAR 10
PGP GY AR
Sbjct: 15 PGPLGYVYAR 24
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 1 PGPAGYSTAR 10
PGP GY AR
Sbjct: 15 PGPLGYVYAR 24
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 1 PGPAGYSTAR 10
PGP GY AR
Sbjct: 15 PGPLGYVYAR 24
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GPAGYSTAR 10
G AGY T+R
Sbjct: 1044 GKAGYVTSR 1052
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PGPAGY 6
PGP GY
Sbjct: 17 PGPCGY 22
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PGPAGY 6
PGP GY
Sbjct: 17 PGPCGY 22
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PGPAGY 6
PGP GY
Sbjct: 17 PGPCGY 22
>sp|MATRX_RABVB|MATRIX protein|Rabies virus (strain silver-haired bat-associated)
Query: 2 GPAGYS 7
GP GYS
Sbjct: 63 GPNGYS 68
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 PGPAGY 6
PGPA Y
Sbjct: 51 PGPAAY 56
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 PGPAGY 6
PGPA Y
Sbjct: 51 PGPAAY 56
>sp|PG181_VARV|PROTEIN OPG181|Variola virus
Query: 1 PGPAGYS 7
PG GYS
Sbjct: 319 PGRRGYS 325
>sp|PG181_VAR67|PROTEIN OPG181|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 PGPAGYS 7
PG GYS
Sbjct: 319 PGRRGYS 325
>sp|PG181_VACCC|PROTEIN OPG181|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PGPAGYS 7
PG GYS
Sbjct: 319 PGRRGYS 325
>sp|PG181_MONPV|PROTEIN OPG181|Monkeypox virus (MPXV)
Query: 1 PGPAGYS 7
PG GYS
Sbjct: 319 PGRRGYS 325
239|Sequence|1191|1200|YSTARPTIPP
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 STARPTIPP 10
ST+RPT PP
Sbjct: 120 STSRPTAPP 128
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 STARPTIPP 10
ST+RPT PP
Sbjct: 120 STSRPTAPP 128
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 STARPTIPP 10
+T+RPT PP
Sbjct: 117 ATSRPTAPP 125
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 STARPTIPP 10
+T+RPT PP
Sbjct: 120 NTSRPTAPP 128
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 STARPTIPP 10
ST+RPT PP
Sbjct: 120 STSRPTAPP 128
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 STARPTIPP 10
+T+RPT PP
Sbjct: 120 NTSRPTAPP 128
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 TARPTIPP 10
T+RPT PP
Sbjct: 121 TSRPTAPP 128
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 STARPTIPP 10
ST+RP PP
Sbjct: 120 STSRPAAPP 128
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 STARPTIPP 10
ST+RPT PP
Sbjct: 120 STSRPTAPP 128
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 STARPTIPP 10
+T+RPT PP
Sbjct: 120 NTSRPTAPP 128
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 STARPTIPP 10
ST+RP PP
Sbjct: 120 STSRPAAPP 128
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 STARPTIPP 10
+T+RPT PP
Sbjct: 120 NTSRPTAPP 128
>sp|NS1_I61A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 4 ARPTIPP 10
RP++PP
Sbjct: 210 GRPSLPP 216
>sp|NS1_I02A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 4 ARPTIPP 10
RP++PP
Sbjct: 210 GRPSLPP 216
>sp|NS1_I02A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 ARPTIPP 10
RP++PP
Sbjct: 210 GRPSLPP 216
>sp|NS1_I30A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 5 RPTIPP 10
RP++PP
Sbjct: 211 RPSLPP 216
>sp|NS1_I67A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 4 ARPTIPP 10
RP++PP
Sbjct: 210 GRPSLPP 216
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 4 ARPTIPP 10
+RP +PP
Sbjct: 1664 SRPNLPP 1670
>sp|NS1_I02A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 ARPTIPP 10
RP++PP
Sbjct: 210 GRPSLPP 216
>sp|NS1_I02A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Guinea
Query: 4 ARPTIPP 10
RP++PP
Sbjct: 210 GRPSLPP 216
>sp|NS1_I77A9|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/New
Query: 1 YSTARPTIPP 10
+ RP+ PP
Sbjct: 207 HENGRPSFPP 216
>sp|NS1_I73A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 YSTARPTIPP 10
+ RP+ PP
Sbjct: 207 HENGRPSFPP 216
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 STARPTIP 9
ST+RPT P
Sbjct: 120 STSRPTAP 127
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 TARPTIPP 10
T+RPT PP
Sbjct: 121 TSRPTAPP 128
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 5 RPTIPP 10
RP IPP
Sbjct: 295 RPLIPP 300
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 STARPTIPP 10
+T+RPT PP
Sbjct: 117 ATSRPTAPP 125
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 ARPTIPP 10
+RPT PP
Sbjct: 122 SRPTAPP 128
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 STARPTIPP 10
+T +PT PP
Sbjct: 117 ATNKPTAPP 125
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 ARPTIPP 10
+RPT PP
Sbjct: 122 SRPTAPP 128
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 STARPTIPP 10
+TA+P++PP
Sbjct: 327 TTAQPSMPP 335
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 STARPTIPP 10
+TA+P++PP
Sbjct: 327 TTAQPSMPP 335
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 STARPTIPP 10
+TA+P++PP
Sbjct: 327 TTAQPSMPP 335
>sp|NS1_I01A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 ARPTIPP 10
RP +PP
Sbjct: 205 GRPPLPP 211
>sp|NS1_I01A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 4 ARPTIPP 10
RP +PP
Sbjct: 205 GRPPLPP 211
>sp|NS1_I00A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Duck/Hong
Query: 4 ARPTIPP 10
RP +PP
Sbjct: 205 GRPPLPP 211
>sp|NS1_I80A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 4 ARPTIPP 10
RP +PP
Sbjct: 210 GRPPLPP 216
>sp|NS1_I78A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New
Query: 4 ARPTIPP 10
RP +PP
Sbjct: 210 GRPPLPP 216
>sp|NS1_I18A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Brevig
Query: 4 ARPTIPP 10
RP +PP
Sbjct: 210 GRPPLPP 216
>sp|NS1_I01A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 ARPTIPP 10
RP +PP
Sbjct: 205 GRPPLPP 211
>sp|VE2_HPV70|REGULATORY protein E2|Human papillomavirus type 70
Query: 1 YSTARPTIP 9
YST+ T+P
Sbjct: 206 YSTSDDTVP 214
>sp|NS1_I85A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 4 ARPTIPP 10
RP +PP
Sbjct: 210 GRPPLPP 216
>sp|NS1_I78A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New
Query: 4 ARPTIPP 10
RP +PP
Sbjct: 210 GRPPLPP 216
>sp|NS1_I59A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 4 ARPTIPP 10
RP +PP
Sbjct: 210 GRPPLPP 216
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 YSTARPTI 8
Y TA+PT+
Sbjct: 1990 YETAQPTV 1997
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 YSTARPTI 8
Y TA+PT+
Sbjct: 1963 YETAQPTV 1970
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 YSTARPTI 8
Y TA+PT+
Sbjct: 1968 YETAQPTV 1975
>sp|NS1_I02A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 4 ARPTIPP 10
RP +PP
Sbjct: 188 GRPPLPP 194
>sp|NS1_I01A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 4 ARPTIPP 10
RP +PP
Sbjct: 205 GRPPLPP 211
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 ARPTIPP 10
+RPT PP
Sbjct: 122 SRPTAPP 128
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 3 TARPTIP 9
TAR TIP
Sbjct: 1103 TARLTIP 1109
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 4 ARPTIP 9
ARPT+P
Sbjct: 181 ARPTVP 186
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 ARPTIP 9
ARPT+P
Sbjct: 181 ARPTVP 186
>sp|NS1_I82A8|NON-STRUCTURAL protein 1|Influenza A virus (strain
Query: 4 ARPTIPP 10
RP +PP
Sbjct: 210 GRPPLPP 216
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 STARPTIP 9
ST+RPT P
Sbjct: 120 STSRPTAP 127
>sp|NS1_I24A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Japan/1924
Query: 4 ARPTIPP 10
RP +PP
Sbjct: 207 GRPPLPP 213
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 ARPTIPP 10
+RPT PP
Sbjct: 122 SRPTAPP 128
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 1 YSTARPTIPP 10
Y PT PP
Sbjct: 249 YKDPTPTTPP 258
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 TARPTIP 9
TAR TIP
Sbjct: 1175 TARLTIP 1181
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 TARPTIP 9
TAR TIP
Sbjct: 1175 TARLTIP 1181
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 TARPTIP 9
TAR TIP
Sbjct: 1175 TARLTIP 1181
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 TARPTIP 9
TAR TIP
Sbjct: 1175 TARLTIP 1181
>sp|UL24_HHV2H|PROTEIN UL24|Human herpesvirus 2 (strain HG52)
Query: 2 STARPTIPP 10
+TARP PP
Sbjct: 215 ATARPQRPP 223
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 ARPTIPP 10
ARP +PP
Sbjct: 77 ARPMLPP 83
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 ARPTIPP 10
ARP +PP
Sbjct: 77 ARPMLPP 83
240|Sequence|1196|1205|PTIPPRAGVI
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TIPPRAGVI 10
TIPP AG++
Sbjct: 58 TIPPTAGIL 66
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TIPPRAGVI 10
TIPP AG++
Sbjct: 58 TIPPTAGIL 66
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TIPPRAGVI 10
TIPP AG++
Sbjct: 58 TIPPTAGIL 66
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TIPPRAGVI 10
TIPP AG++
Sbjct: 58 TIPPTAGIL 66
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 TIPPRAGVI 10
TIPP AG++
Sbjct: 58 TIPPTAGIL 66
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TIPPRAGVI 10
TIPP AG++
Sbjct: 58 TIPPTAGIL 66
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TIPPRAGVI 10
TIPP AG++
Sbjct: 58 TIPPTAGIL 66
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TIPPRAGVI 10
TIPP AG++
Sbjct: 58 TIPPTAGIL 66
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 1 PTIPPR 6
PT PPR
Sbjct: 254 PTTPPR 259
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 IPPRAGVI 10
IPP AG++
Sbjct: 59 IPPTAGIL 66
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 IPPRAGVI 10
IPP AG++
Sbjct: 59 IPPTAGIL 66
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TIPPRAGVI 10
+IPP AG++
Sbjct: 57 SIPPTAGIL 65
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TIPPRAGVI 10
+IPP AG++
Sbjct: 57 SIPPTAGIL 65
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 IPPRAGVI 10
IPP AGV+
Sbjct: 59 IPPTAGVL 66
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 IPPRAGVI 10
IPP AGV+
Sbjct: 59 IPPTAGVL 66
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TIPPRAGVI 10
+IPP AG++
Sbjct: 57 SIPPTAGIL 65
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TIPPRAGVI 10
+IPP AG++
Sbjct: 57 SIPPTAGIL 65
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TIPPRAGVI 10
+IPP AG++
Sbjct: 57 SIPPTAGIL 65
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 IPPRAGVI 10
IPP AGV+
Sbjct: 59 IPPTAGVL 66
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 IPPRAGVI 10
IPP AGV+
Sbjct: 59 IPPTAGVL 66
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 IPPRAGVI 10
IPP AGV+
Sbjct: 59 IPPTAGVL 66
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 IPPRAGVI 10
IPP AG++
Sbjct: 59 IPPTAGIL 66
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 IPPRAGVI 10
IPP AG++
Sbjct: 59 IPPTAGIL 66
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 IPPRAGVI 10
IPP AG++
Sbjct: 59 IPPTAGIL 66
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 PTIPP 5
PTIPP
Sbjct: 609 PTIPP 613
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 1 PTIPP 5
PTIPP
Sbjct: 608 PTIPP 612
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 1 PTIPP 5
PTIPP
Sbjct: 609 PTIPP 613
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 1 PTIPP 5
PTIPP
Sbjct: 596 PTIPP 600
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 1 PTIPP 5
PTIPP
Sbjct: 596 PTIPP 600
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 1 PTIPP 5
PTIPP
Sbjct: 596 PTIPP 600
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 1 PTIPP 5
PTIPP
Sbjct: 596 PTIPP 600
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 1 PTIPP 5
PTIPP
Sbjct: 596 PTIPP 600
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 1 PTIPP 5
PTIPP
Sbjct: 602 PTIPP 606
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 1 PTIPP 5
PTIPP
Sbjct: 602 PTIPP 606
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 PTIPP 5
PTIPP
Sbjct: 596 PTIPP 600
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 1 PTIPP 5
PTIPP
Sbjct: 596 PTIPP 600
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PPRAGVI 10
PP AGVI
Sbjct: 437 PPIAGVI 443
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 1 PTIPP 5
PTIPP
Sbjct: 595 PTIPP 599
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 1 PTIPP 5
PTIPP
Sbjct: 595 PTIPP 599
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 1 PTIPP 5
PTIPP
Sbjct: 595 PTIPP 599
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 1 PTIPP 5
PTIPP
Sbjct: 595 PTIPP 599
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 PTIPPR 6
PT PPR
Sbjct: 441 PTTPPR 446
>sp|AN_VZVO|ALKALINE nuclease|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PTIPPRAGV 9
PTIPP V
Sbjct: 476 PTIPPHCAV 484
>sp|AN_VZVD|ALKALINE nuclease|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PTIPPRAGV 9
PTIPP V
Sbjct: 476 PTIPPHCAV 484
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PTIPPRAG 8
PT PP G
Sbjct: 121 PTAPPSGG 128
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PTIPPRAG 8
PT PP G
Sbjct: 121 PTAPPSGG 128
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 PTIPP 5
PT+PP
Sbjct: 1644 PTVPP 1648
>sp|VL2_HPV65|MINOR capsid protein L2|Human papillomavirus 65
Query: 1 PTIPPRAGV 9
PTIPP G+
Sbjct: 446 PTIPPGLGL 454
>sp|VL2_HPV04|MINOR capsid protein L2|Human papillomavirus 4
Query: 1 PTIPPRAGV 9
PTIPP G+
Sbjct: 449 PTIPPGLGL 457
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 1 PTIPPRAG 8
PT+ PR G
Sbjct: 753 PTLLPRGG 760
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 1 PTIPPRAG 8
PT+ PR G
Sbjct: 753 PTLLPRGG 760
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 1 PTIPPRAG 8
PT+ PR G
Sbjct: 753 PTLLPRGG 760
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 1 PTIPPRAG 8
PT+ PR G
Sbjct: 753 PTLLPRGG 760
241|Sequence|1201|1210|RAGVISAPQS
>sp|CAPSD_HPBVH|CAPSID protein precursor|Human picobirnavirus (strain
Query: 1 RAGVISAPQS 10
RAG +AP S
Sbjct: 209 RAGAFAAPAS 218
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 3 GVISAPQ 9
GVIS+P+
Sbjct: 379 GVISSPE 385
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 AGVISAPQS 10
AGV+ P+S
Sbjct: 537 AGVVETPRS 545
242|Sequence|1206|1215|SAPQSHARAS
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 3 PQSHARA 9
PQ H RA
Sbjct: 268 PQGHERA 274
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 3 PQSHARAS 10
P SH RAS
Sbjct: 81 PTSHRRAS 88
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 3 PQSHARAS 10
P SH RAS
Sbjct: 81 PTSHRRAS 88
243|Sequence|1211|1220|HARASAGRLT
>sp|VL2_HPV52|MINOR capsid protein L2|Human papillomavirus 52
Query: 1 HARASAGRL 9
H RASA +L
Sbjct: 9 HKRASATQL 17
244|Sequence|1216|1225|AGRLTPESQS
>sp|PG043_MONPV|MONOGLYCERIDE lipase homolog|Monkeypox virus (MPXV)
Query: 2 GRLTPESQS 10
G+L PES S
Sbjct: 159 GKLCPESVS 167
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 AGRLTPESQS 10
A RL P SQS
Sbjct: 1164 AHRLVPYSQS 1173
>sp|K5_VACCC|PROTEIN K5|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GRLTPESQS 10
G+L PES S
Sbjct: 53 GKLCPESVS 61
>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)
Query: 1 AGRLTPESQS 10
AGR PES S
Sbjct: 324 AGRENPESAS 333
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 AGRLTP 6
AGR+TP
Sbjct: 1221 AGRITP 1226
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 AGRLTP 6
AGR+TP
Sbjct: 1222 AGRITP 1227
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 AGRLTP 6
AGR+TP
Sbjct: 1221 AGRITP 1226
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 RLTPESQS 10
R TPESQ+
Sbjct: 442 RATPESQA 449
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 RLTPESQS 10
R TPESQ+
Sbjct: 442 RATPESQA 449
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 AGRLTPE 7
+ RLTPE
Sbjct: 1881 SARLTPE 1887
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 AGRLTPE 7
+ RLTPE
Sbjct: 1878 SARLTPE 1884
>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United
Query: 1 AGRLTPE 7
AG+L PE
Sbjct: 18 AGQLVPE 24
>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United
Query: 1 AGRLTPESQS 10
AG+L PE +
Sbjct: 18 AGQLVPEVNT 27
245|Sequence|1221|1230|PESQSKTSET
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 ESQSKTSE 9
ESQ TSE
Sbjct: 2019 ESQQPTSE 2026
246|Sequence|1226|1235|KTSETSKGST
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 KTSETSKGS 9
+ SETS+G+
Sbjct: 328 RASETSRGT 336
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 1 KTSETSKGS 9
KTS SKG+
Sbjct: 499 KTSNVSKGT 507
247|Sequence|1231|1240|SKGSTFLPEP
>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)
Query: 1 SKGSTFLPEP 10
S GS+F PEP
Sbjct: 319 SHGSSFNPEP 328
>sp|PHOSP_MUMP1|PHOSPHOPROTEIN virus (strain SBL-1) (MuV)
Query: 1 SKGSTFLPEP 10
S G T +PEP
Sbjct: 87 SNGGTQIPEP 96
>sp|PG055_VACCC|PROTEIN OPG055|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SKGSTFLPE 9
S+G FLP+
Sbjct: 181 SRGVQFLPQ 189
>sp|PG055_MONPV|PROTEIN OPG055|Monkeypox virus (MPXV)
Query: 1 SKGSTFLPE 9
S+G FLP+
Sbjct: 181 SRGVQFLPQ 189
>sp|PG055_VACCP|PROTEIN OPG055|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 SKGSTFLPE 9
S+G FLP+
Sbjct: 177 SRGVQFLPQ 185
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 4 STFLPEP 10
S+FLP+P
Sbjct: 1878 SSFLPDP 1884
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 1 SKGSTFLPEP 10
+KG+ LP P
Sbjct: 746 AKGALLLPYP 755
>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6
Query: 5 TFLPEP 10
TF PEP
Sbjct: 89 TFQPEP 94
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 SKGSTFLPEP 10
+KG+ LP P
Sbjct: 745 AKGALLLPIP 754
>sp|PHOSP_MUMPJ|PHOSPHOPROTEIN virus genotype A (strain
Query: 3 GSTFLPEP 10
G T +PEP
Sbjct: 89 GGTQIPEP 96
>sp|PHOSP_MUMPZ|PHOSPHOPROTEIN virus genotype N (strain
Query: 3 GSTFLPEP 10
G T +PEP
Sbjct: 89 GGTQIPEP 96
>sp|PHOSP_MUMPE|PHOSPHOPROTEIN virus (strain Enders) (MuV)
Query: 3 GSTFLPEP 10
G T +PEP
Sbjct: 89 GGTQIPEP 96
>sp|I_MUMPJ|I virus genotype A (strain
Query: 3 GSTFLPEP 10
G T +PEP
Sbjct: 89 GGTQIPEP 96
>sp|I_MUMPZ|I virus genotype N (strain
Query: 3 GSTFLPEP 10
G T +PEP
Sbjct: 89 GGTQIPEP 96
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 5 TFLPEP 10
TF PEP
Sbjct: 117 TFQPEP 122
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 SKGSTFLPE 9
S GST PE
Sbjct: 242 SVGSTLYPE 250
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 SKGSTFLPE 9
S GST PE
Sbjct: 242 SVGSTLYPE 250
>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 SKGSTFLPEP 10
++GS LP P
Sbjct: 134 TRGSVRLPSP 143
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 5 TFLPEP 10
TF PEP
Sbjct: 199 TFQPEP 204
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 SKGSTFLPE 9
S GST PE
Sbjct: 242 SVGSTLYPE 250
>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SKGSTFLPEP 10
++GS LP P
Sbjct: 134 TRGSVRLPSP 143
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 1 SKGSTF 6
SKG+TF
Sbjct: 191 SKGATF 196
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 SKGSTFLPE 9
S GST PE
Sbjct: 242 SVGSTLYPE 250
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 SKGSTFLPE 9
S GST PE
Sbjct: 242 SVGSTLYPE 250
>sp|CAPSH_ADE04|HEXON protein|Human adenovirus E serotype 4
Query: 5 TFLPEP 10
TF PEP
Sbjct: 81 TFQPEP 86
>sp|V_MUMPJ|NON-STRUCTURAL protein V|Mumps virus genotype A (strain
Query: 2 KGSTFLPEP 10
G T +PEP
Sbjct: 88 NGGTQIPEP 96
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 5 TFLPEP 10
TF PEP
Sbjct: 182 TFQPEP 187
>sp|V_MUMPZ|NON-STRUCTURAL protein V|Mumps virus genotype N (strain
Query: 3 GSTFLPEP 10
G T +PEP
Sbjct: 89 GGTQIPEP 96
>sp|PHOSP_MUMPM|PHOSPHOPROTEIN virus genotype B (strain
Query: 3 GSTFLPEP 10
G T +PEP
Sbjct: 89 GGTQVPEP 96
>sp|VPAP_HCMVM|DNA polymerase processivity factor|Human cytomegalovirus (strain
Query: 5 TFLPEP 10
TFLP P
Sbjct: 41 TFLPTP 46
248|Sequence|1236|1245|FLPEPLKPQA
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 LPEPLKP 8
LP+PLKP
Sbjct: 788 LPDPLKP 794
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 LPEPLKPQA 10
LP P KPQA
Sbjct: 1504 LPNPRKPQA 1512
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 LPEPLKPQA 10
LP P KPQA
Sbjct: 1503 LPNPRKPQA 1511
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 LPEPLKPQA 10
LP P KPQA
Sbjct: 1503 LPNPRKPQA 1511
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 FLPEPL 6
FLP+PL
Sbjct: 1880 FLPDPL 1885
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 LPEPLKP 8
LP+P KP
Sbjct: 806 LPDPSKP 812
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 FLPEPLKP 8
++PE +KP
Sbjct: 653 YIPEDIKP 660
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 FLPEPL 6
F+P+PL
Sbjct: 1880 FIPDPL 1885
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 FLPEPLKPQA 10
F PE L P A
Sbjct: 137 FFPEGLDPSA 146
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 FLPEPLKPQA 10
F PE L P A
Sbjct: 137 FFPEGLDPSA 146
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 FLPEPLKPQA 10
F PE L P A
Sbjct: 137 FFPEGLDPSA 146
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 PEPLKPQA 10
PEP P+A
Sbjct: 113 PEPKNPEA 120
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 3 PEPLKPQ 9
P+P+ PQ
Sbjct: 1737 PQPVTPQ 1743
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 FLPEPLKP 8
++PE +KP
Sbjct: 849 YIPETVKP 856
>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)
Query: 1 FLPEPLK 7
F PEP++
Sbjct: 288 FTPEPIQ 294
249|Sequence|1241|1250|LKPQAAFPPQ
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 KPQAAFP 8
KPQ +FP
Sbjct: 5046 KPQLSFP 5052
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 LKPQAAFPP 9
L+P FPP
Sbjct: 2272 LRPTKKFPP 2280
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LKPQAAFPP 9
L QAA+PP
Sbjct: 302 LNRQAAYPP 310
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LKPQAAFPP 9
L QAA+PP
Sbjct: 302 LNRQAAYPP 310
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LKPQAAFPP 9
L QAA+PP
Sbjct: 302 LNRQAAYPP 310
>sp|UL148_HCMVM|MEMBRANE protein UL148|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 KPQAAFPPQ 10
+PQ F PQ
Sbjct: 136 RPQQFFTPQ 144
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 KPQAAFPPQ 10
+PQA PPQ
Sbjct: 2099 RPQAIGPPQ 2107
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 KPQAAFPPQ 10
+PQA PPQ
Sbjct: 2077 RPQAIGPPQ 2085
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 KPQAAFPPQ 10
+PQA PPQ
Sbjct: 2072 RPQAIGPPQ 2080
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 3 PQAAFPP 9
PQ FPP
Sbjct: 5 PQLNFPP 11
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 3 PQAAFPP 9
P A +PP
Sbjct: 400 PMAEYPP 406
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 3 PQAAFPP 9
P A +PP
Sbjct: 400 PMAEYPP 406
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 3 PQAAFPP 9
P A +PP
Sbjct: 400 PMAEYPP 406
250|Sequence|1246|1255|AFPPQSSLPP
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 PPQSSLPP 10
PP+++LPP
Sbjct: 379 PPKATLPP 386
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 AFPPQS 6
AFPP S
Sbjct: 1590 AFPPDS 1595
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 1 AFPPQSSLPP 10
FPP + PP
Sbjct: 508 GFPPTAGQPP 517
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 AFPPQSSLPP 10
FPP + PP
Sbjct: 508 GFPPTAGQPP 517
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 4 PQSSLP 9
PQS+LP
Sbjct: 2294 PQSALP 2299
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 AFPPQS 6
FPPQS
Sbjct: 124 GFPPQS 129
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 AFPPQS 6
FPPQS
Sbjct: 124 GFPPQS 129
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 AFPPQS 6
FPPQS
Sbjct: 124 GFPPQS 129
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 AFPPQS 6
FPPQS
Sbjct: 124 GFPPQS 129
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 1 AFPPQS 6
FPPQS
Sbjct: 124 GFPPQS 129
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 AFPPQS 6
FPPQS
Sbjct: 124 GFPPQS 129
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 3 PPQSSLPP 10
P Q LPP
Sbjct: 504 PQQLKLPP 511
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 3 PPQSSLPP 10
P Q LPP
Sbjct: 505 PQQLKLPP 512
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 AFPPQS 6
FPPQS
Sbjct: 124 GFPPQS 129
>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus
Query: 1 AFPPQS 6
FPPQS
Sbjct: 124 GFPPQS 129
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 PPQSSLPP 10
PP + +PP
Sbjct: 469 PPGAGVPP 476
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 4 PQSSLPP 10
PQ S PP
Sbjct: 210 PQGSCPP 216
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 3 PPQSSLPP 10
PP S PP
Sbjct: 182 PPPGSCPP 189
>sp|MATRX_RABVB|MATRIX protein|Rabies virus (strain silver-haired bat-associated)
Query: 3 PPQSSLPP 10
PP S PP
Sbjct: 19 PPLVSAPP 26
>sp|MATRX_ABLVH|MATRIX protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 3 PPQSSLPP 10
PP S PP
Sbjct: 19 PPLVSAPP 26
>sp|VPR_HV2KR|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 2 FPPQSSLPP 10
FPP+ PP
Sbjct: 8 FPPEDETPP 16
251|Sequence|1251|1260|SSLPPPAQRL
>sp|TRX1_EBVB9|TRIPLEX capsid protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 LPPPAQRL 10
LPPPA+RL
Sbjct: 20 LPPPARRL 27
>sp|UL41_HCMVA|UNCHARACTERIZED protein UL41|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LPPPAQRL 10
LPPP R+
Sbjct: 79 LPPPGYRV 86
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 PPAQRL 10
PP QRL
Sbjct: 291 PPLQRL 296
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 PPAQRL 10
PP QRL
Sbjct: 291 PPLQRL 296
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 2 SLPPPAQ 8
S+PPPA+
Sbjct: 723 SMPPPAE 729
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 1 SSLPPPAQRL 10
SS PP QR+
Sbjct: 247 SSPPPKRQRV 256
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 1 SSLPPP 6
++LPPP
Sbjct: 1216 TNLPPP 1221
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 LPPPAQRL 10
LPP QRL
Sbjct: 2879 LPPIIQRL 2886
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LPPPAQRL 10
LPP QRL
Sbjct: 2879 LPPIIQRL 2886
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 LPPPAQRL 10
LPP QRL
Sbjct: 2879 LPPIIQRL 2886
252|Sequence|1256|1265|PAQRLQEPLV
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 2 AQRLQEPLV 10
++RLQ PL+
Sbjct: 1663 SRRLQNPLI 1671
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 PAQRLQEP 8
P Q ++EP
Sbjct: 361 PTQNIKEP 368
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PAQRLQ 6
PAQR+Q
Sbjct: 407 PAQRIQ 412
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 PAQRLQEP 8
P Q ++EP
Sbjct: 361 PTQNIKEP 368
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 1 PAQRLQEP 8
P Q ++EP
Sbjct: 361 PTQNIKEP 368
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 2 AQRLQEPLV 10
+++LQ PL+
Sbjct: 1662 SRKLQNPLI 1670
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 AQRLQEPLV 10
+++LQ PL+
Sbjct: 1663 SRKLQNPLI 1671
253|Sequence|1261|1270|QEPLVPVAAP
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 EPLVPVAAP 10
+PL P+A P
Sbjct: 350 DPLAPIAMP 358
>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 EPLVPVAAP 10
+PL P+A P
Sbjct: 350 DPLAPIAIP 358
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 1 QEPLVPVAAP 10
QE VP +AP
Sbjct: 133 QELEVPASAP 142
>sp|PG067_VARV|PROTEIN OPG067|Variola virus
Query: 2 EPLVPVAAP 10
EP +PV P
Sbjct: 299 EPCMPVRRP 307
>sp|PG067_VAR67|PROTEIN OPG067|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 EPLVPVAAP 10
EP +PV P
Sbjct: 299 EPCMPVRRP 307
>sp|PG067_VACCD|PROTEIN OPG067|Vaccinia virus (strain Dairen I)
Query: 2 EPLVPVAAP 10
EP +PV P
Sbjct: 299 EPCMPVRRP 307
>sp|PG067_VACCC|PROTEIN OPG067|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 EPLVPVAAP 10
EP +PV P
Sbjct: 299 EPCMPVRRP 307
>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)
Query: 4 LVPVAAP 10
++PVA+P
Sbjct: 395 VIPVASP 401
>sp|NCAP_DUGBV|NUCLEOPROTEIN virus
Query: 4 LVPVAAP 10
++PVA+P
Sbjct: 394 VIPVASP 400
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 QEPLVPVAAP 10
QEP P AP
Sbjct: 20 QEPREPEVAP 29
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 QEPLVPVAAP 10
QEP P AP
Sbjct: 20 QEPREPEVAP 29
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 EPLVPVAA 9
EPLVP +
Sbjct: 65 EPLVPTGS 72
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 EPLVPVAA 9
EPLVP +
Sbjct: 65 EPLVPTGS 72
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 EPLVPVAA 9
EPLVP +
Sbjct: 65 EPLVPTGS 72
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 EPLVPVAA 9
EPLVP +
Sbjct: 65 EPLVPTGS 72
254|Sequence|1266|1275|PVAAPMPQSG
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 1 PVAAPMPQSG 10
P A+P+PQ G
Sbjct: 175 PCASPVPQPG 184
>sp|VP24_EBOSU|MEMBRANE-ASSOCIATED protein VP24|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 PVAAPMPQS 9
PVA P P S
Sbjct: 229 PVATPKPSS 237
>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 1 PVAAPMPQSG 10
PVA P+P +G
Sbjct: 250 PVATPIPGTG 259
>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PVAAPMPQSG 10
PVA P+P +G
Sbjct: 250 PVATPIPGTG 259
>sp|GP350_EBVB9|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PVAAPMPQSG 10
PVA P+P +G
Sbjct: 250 PVATPIPGTG 259
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 VAAPMPQSG 10
VA P PQ G
Sbjct: 3093 VARPSPQGG 3101
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PVAAPMPQSG 10
PV+AP P G
Sbjct: 736 PVSAPNPTLG 745
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PVAAPMPQSG 10
PV+AP P G
Sbjct: 736 PVSAPNPTLG 745
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 1 PVAAPMPQSG 10
P A P Q G
Sbjct: 139 PAATPAEQGG 148
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 1 PVAAPMPQSG 10
P +P PQ G
Sbjct: 175 PCPSPAPQQG 184
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 PVAAPMPQS 9
P AP+P S
Sbjct: 714 PPGAPVPNS 722
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PVAAPMPQSG 10
P+A PM G
Sbjct: 1371 PLAGPMVAGG 1380
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PVAAPMPQSG 10
P+A PM G
Sbjct: 1371 PLAGPMVAGG 1380
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PVAAPMPQSG 10
P+A PM G
Sbjct: 1371 PLAGPMVAGG 1380
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PVAAPMPQSG 10
P+A PM G
Sbjct: 1371 PLAGPMVAGG 1380
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PVAAPMPQSG 10
P+A PM G
Sbjct: 1371 PLAGPMVAGG 1380
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 3 AAPMPQSG 10
AAP QSG
Sbjct: 623 AAPPKQSG 630
>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PVAAPMPQSG 10
PV P+P +G
Sbjct: 250 PVVTPIPGTG 259
255|Sequence|1271|1280|MPQSGPQPNL
>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 MPQSGPQPNL 10
MP GP N+
Sbjct: 646 MPAHGPAKNM 655
>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 MPQSGPQPNL 10
MP GP N+
Sbjct: 646 MPAHGPAKNM 655
>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 MPQSGPQPNL 10
MP GP N+
Sbjct: 646 MPAHGPAKNM 655
>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort
Query: 1 MPQSGPQPNL 10
MP GP N+
Sbjct: 646 MPAHGPAKNM 655
>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 MPQSGPQPNL 10
MP GP N+
Sbjct: 646 MPAHGPAKNM 655
>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New
Query: 1 MPQSGPQPNL 10
MP GP N+
Sbjct: 646 MPAHGPAKNM 655
>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 MPQSGPQPNL 10
MP GP N+
Sbjct: 646 MPAHGPAKNM 655
>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 MPQSGPQPNL 10
MP GP N+
Sbjct: 646 MPAHGPAKNM 655
>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 MPQSGPQPNL 10
MP GP N+
Sbjct: 646 MPAHGPAKNM 655
>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 MPQSGPQPNL 10
MP GP N+
Sbjct: 646 MPAHGPAKNM 655
>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 MPQSGPQPNL 10
MP GP N+
Sbjct: 646 MPAHGPAKNM 655
>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 MPQSGPQPNL 10
MP GP N+
Sbjct: 646 MPAHGPAKNM 655
>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 MPQSGPQPNL 10
MP GP N+
Sbjct: 646 MPAHGPAKNM 655
>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 MPQSGPQPNL 10
MP GP N+
Sbjct: 646 MPAHGPAKNM 655
>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 MPQSGPQPNL 10
MP GP N+
Sbjct: 646 MPAHGPAKNM 655
>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 MPQSGPQPNL 10
MP GP N+
Sbjct: 646 MPAHGPAKNM 655
>sp|RDRP_I82A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 MPQSGPQPNL 10
MP GP N+
Sbjct: 50 MPAHGPAKNM 59
>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Brevig
Query: 1 MPQSGPQPNL 10
MP GP N+
Sbjct: 646 MPAHGPAKNM 655
>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Puerto
Query: 1 MPQSGPQPNL 10
MP GP N+
Sbjct: 646 MPAHGPAKNM 655
>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 MPQSGPQPNL 10
MP GP N+
Sbjct: 646 MPAHGPAKNM 655
>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 MPQSGPQPNL 10
MP GP N+
Sbjct: 646 MPAHGPAKNM 655
>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31
Query: 1 MPQSGPQPNL 10
MP GP N+
Sbjct: 646 MPAHGPAKNM 655
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 MPQSGPQPNL 10
M QSG QP++
Sbjct: 924 MIQSGLQPSI 933
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 MPQSGPQPNL 10
M QSG QP++
Sbjct: 924 MIQSGLQPSI 933
>sp|NEC2_HCMVA|NUCLEAR egress protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PQSGP 6
PQSGP
Sbjct: 353 PQSGP 357
>sp|NEC2_HCMVM|NUCLEAR egress protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PQSGP 6
PQSGP
Sbjct: 354 PQSGP 358
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 1 MPQSGP 6
+PQSGP
Sbjct: 688 LPQSGP 693
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 1 MPQSGP 6
+PQSGP
Sbjct: 688 LPQSGP 693
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 2 PQSGPQPNL 10
P S P P L
Sbjct: 736 PVSAPNPTL 744
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PQSGPQPNL 10
P S P P L
Sbjct: 736 PVSAPNPTL 744
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 3 QSGPQPNL 10
+ GP+P L
Sbjct: 287 EKGPEPTL 294
256|Sequence|1276|1285|PQPNLETPPQ
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PNLETPPQ 10
PNL +PP+
Sbjct: 231 PNLPSPPK 238
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PNLETPPQ 10
PNL +PP+
Sbjct: 231 PNLPSPPK 238
>sp|ORF27_HHV8P|PROTEIN ORF27|Human herpesvirus 8 type P
Query: 1 PQPNLETPP 9
P PNL TPP
Sbjct: 276 PWPNLSTPP 284
>sp|VE2_HPV45|REGULATORY protein E2|Human papillomavirus 45
Query: 1 PQPNLETP 8
P+P+++TP
Sbjct: 239 PKPHIQTP 246
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 PQPNLETPPQ 10
P+P+ + PQ
Sbjct: 2214 PEPDRQRTPQ 2223
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 3 PNLETPP 9
P L++PP
Sbjct: 311 PKLQSPP 317
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 PQPNLETPPQ 10
P+P+ + PQ
Sbjct: 2215 PEPDRQRTPQ 2224
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 PQPNLETPPQ 10
P+P+ + PQ
Sbjct: 2215 PEPDRQRTPQ 2224
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 PQPNLET 7
P P++ET
Sbjct: 641 PNPSMET 647
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 PQPNLET 7
P P++ET
Sbjct: 641 PNPSMET 647
>sp|UL92_HHV7J|PROTEIN U63|Human herpesvirus 7 (strain JI)
Query: 2 QPNLET 7
+PN+ET
Sbjct: 94 EPNMET 99
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PQPNLETPP 9
P P TPP
Sbjct: 1801 PAPRTRTPP 1809
>sp|PG139_VARV|VIRION membrane protein OPG139|Variola virus
Query: 1 PQPNLETPP 9
P PN+ PP
Sbjct: 32 PSPNVNLPP 40
>sp|PG139_VAR67|VIRION membrane protein OPG139|Variola virus (isolate
Query: 1 PQPNLETPP 9
P PN+ PP
Sbjct: 32 PSPNVNLPP 40
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PQPNLE 6
P PNLE
Sbjct: 115 PPPNLE 120
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PQPNLE 6
P PNLE
Sbjct: 115 PPPNLE 120
>sp|UL92_HHV6Z|PROTEIN U63|Human herpesvirus 6B (strain Z29)
Query: 2 QPNLET 7
+PN+ET
Sbjct: 101 EPNIET 106
>sp|UL92_HHV6U|PROTEIN U63|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 QPNLET 7
+PN+ET
Sbjct: 99 EPNIET 104
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PQPNLE 6
P PNLE
Sbjct: 115 PPPNLE 120
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 1 PQPNLETPPQ 10
P P PPQ
Sbjct: 346 PAPGAAGPPQ 355
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 PQPNLETP 8
P P ETP
Sbjct: 1224 PPPKPETP 1231
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 1 PQPNLETPPQ 10
P P PPQ
Sbjct: 346 PVPGAAGPPQ 355
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 NLETPPQ 10
NL+ PPQ
Sbjct: 34 NLDRPPQ 40
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 NLETPPQ 10
NL+ PPQ
Sbjct: 34 NLDRPPQ 40
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 QPNLETPP 9
QP TPP
Sbjct: 70 QPTTFTPP 77
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 2 QPNLETPP 9
QP TPP
Sbjct: 70 QPTTFTPP 77
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 NLETPPQ 10
NL+ PPQ
Sbjct: 34 NLDRPPQ 40
>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 2 QPNLETPP 9
QP TPP
Sbjct: 70 QPTTFTPP 77
257|Sequence|1281|1290|ETPPQPPPRS
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TPPQPPPR 9
+PP+ PPR
Sbjct: 235 SPPKLPPR 242
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TPPQPPPR 9
+PP+ PPR
Sbjct: 235 SPPKLPPR 242
>sp|UL11P_HCMVA|PROTEIN UL11|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ETPPQPPPR 9
ETP QP P+
Sbjct: 216 ETPLQPSPQ 224
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 4 PQPPPR 9
P PPPR
Sbjct: 49 PSPPPR 54
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 PQPPPR 9
P PPPR
Sbjct: 49 PSPPPR 54
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 PPQPPPRS 10
PPQP PR+
Sbjct: 1790 PPQPAPRT 1797
>sp|UL11P_HCMVM|PROTEIN UL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ETPPQPPPR 9
ETP QP P+
Sbjct: 213 ETPLQPSPQ 221
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 1 ETPPQPPPR 9
TPP+PPP+
Sbjct: 1384 STPPKPPPK 1392
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 PPQPPP 8
PPQ PP
Sbjct: 529 PPQTPP 534
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 ETPPQPP 7
+ PP PP
Sbjct: 2862 KAPPPPP 2868
Query: 4 PQPPP 8
P PPP
Sbjct: 2864 PPPPP 2868
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 PQPPP 8
P PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 PQPPP 8
P PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 PQPPP 8
P PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 PQPPP 8
P PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 4 PQPPP 8
P PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 PQPPP 8
P PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 PQPPP 8
P PPP
Sbjct: 1483 PSPPP 1487
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 TPPQPPPRS 10
TPP P PR+
Sbjct: 1836 TPPVPKPRA 1844
Query: 2 TPPQPPPR 9
TPP P PR
Sbjct: 1771 TPPIPKPR 1778
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 PPQPP 7
PP PP
Sbjct: 1952 PPNPP 1956
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 PQPPP 8
P PPP
Sbjct: 1073 PSPPP 1077
>sp|SCAF_HHV2H|CAPSID scaffolding protein|Human herpesvirus 2 (strain HG52)
Query: 1 ETPPQPP 7
ETP QPP
Sbjct: 522 ETPAQPP 528
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 PPQPPPRS 10
PP P PR+
Sbjct: 1798 PPHPAPRT 1805
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 PPQPPPRS 10
PP P PR+
Sbjct: 1798 PPHPAPRT 1805
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 TPPQPPPRS 10
T P P PRS
Sbjct: 124 TAPTPKPRS 132
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 TPPQPPPRS 10
T P P PRS
Sbjct: 124 TAPTPKPRS 132
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 TPPQPPPRS 10
T P P PRS
Sbjct: 124 TAPTPKPRS 132
>sp|CEP1_HHV11|CYTOPLASMIC envelopment protein 1|Human herpesvirus 1 (strain 17)
Query: 4 PQPPPRS 10
P PPPRS
Sbjct: 245 PGPPPRS 251
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 2 TPPQPPPRS 10
+PPQ PP S
Sbjct: 2413 SPPQTPPMS 2421
258|Sequence|1286|1295|PPPRSRSSHS
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 2 PPRSRSS 8
PP+SRS+
Sbjct: 267 PPKSRST 273
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 2 PPRSRS 7
PP+SRS
Sbjct: 271 PPKSRS 276
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 2 PPRSRSS 8
PP+ RSS
Sbjct: 316 PPKLRSS 322
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 2 PPRSRSS 8
PP+ RSS
Sbjct: 302 PPKLRSS 308
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 PPPRSR 6
PPPR+R
Sbjct: 788 PPPRTR 793
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 2 PPRSRSSHS 10
PP RS+H+
Sbjct: 2471 PPLERSNHA 2479
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 PPRSRSS 8
PP+SRS+
Sbjct: 1709 PPKSRST 1715
259|Sequence|1291|1300|RSSHSLPSEA
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 SSHSLPSEA 10
++HSLPSE
Sbjct: 1165 ANHSLPSEV 1173
>sp|ORF23_TTVV2|PROBABLE protein VP2|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 1 RSSHSLP 7
R+SHS+P
Sbjct: 150 RNSHSIP 156
>sp|ORF23_TTVV1|PROBABLE protein VP2|Torque teno virus (strain VT416)
Query: 1 RSSHSLP 7
R+SHS+P
Sbjct: 150 RNSHSIP 156
260|Sequence|1296|1305|LPSEASSQPQ
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 1 LPSEASSQPQ 10
LP+ A +QP
Sbjct: 30 LPARAGAQPH 39
>sp|TAT_HV1S1|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 1 LPSEASSQPQ 10
LP + +SQPQ
Sbjct: 69 LPKQPASQPQ 78
261|Sequence|1301|1310|SSQPQVKTNG
>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)
Query: 2 SQPQVKTN 9
S+P++KTN
Sbjct: 363 SRPKIKTN 370
>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate
Query: 2 SQPQVKTN 9
S+P++KTN
Sbjct: 363 SRPKIKTN 370
>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SQPQVKTN 9
S+P++KTN
Sbjct: 364 SRPKIKTN 371
>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)
Query: 2 SQPQVKTN 9
S+P++KTN
Sbjct: 364 SRPKIKTN 371
>sp|GG_HHV11|ENVELOPE glycoprotein G|Human herpesvirus 1 (strain 17)
Query: 1 SSQPQVKTNG 10
++QPQ++T G
Sbjct: 32 TTQPQLQTTG 41
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 3 QPQVKTNG 10
QPQV++ G
Sbjct: 148 QPQVRSTG 155
>sp|TEG3_HHV11|TEGUMENT protein UL14|Human herpesvirus 1 (strain 17)
Query: 1 SSQPQVKTNG 10
+S P+V NG
Sbjct: 154 TSAPKVHANG 163
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 4 PQVKTNG 10
PQ+ TNG
Sbjct: 664 PQLSTNG 670
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 4 PQVKTNG 10
PQ+ TNG
Sbjct: 664 PQLSTNG 670
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 4 PQVKTNG 10
PQ+ TNG
Sbjct: 665 PQLSTNG 671
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 PQVKTNG 10
PQ+ TNG
Sbjct: 665 PQMSTNG 671
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 3 QPQVKTN 9
+P++KTN
Sbjct: 18 EPELKTN 24
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 4 PQVKTNG 10
PQ+ TNG
Sbjct: 664 PQLSTNG 670
262|Sequence|1306|1315|VKTNGISDGK
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 TNGISDG 9
TNGIS+G
Sbjct: 265 TNGISNG 271
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 3 TNGISDG 9
TNGIS+G
Sbjct: 265 TNGISNG 271
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 3 TNGISDG 9
TNGIS+G
Sbjct: 265 TNGISNG 271
>sp|VL2_HPV34|MINOR capsid protein L2|Human papillomavirus type 34
Query: 4 NGISDG 9
NGI+DG
Sbjct: 357 NGINDG 362
>sp|UL33_HHV6U|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 6A (strain
Query: 1 VKTNGI 6
VKTNG+
Sbjct: 165 VKTNGM 170
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 2 KTNGISD 8
K NGIS+
Sbjct: 1063 KVNGISE 1069
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 2 KTNGISD 8
K NGIS+
Sbjct: 1064 KVNGISE 1070
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 2 KTNGISD 8
K NGIS+
Sbjct: 1063 KVNGISE 1069
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 2 KTNGISD 8
K NGIS+
Sbjct: 1065 KVNGISE 1071
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 2 KTNGISD 8
K NGIS+
Sbjct: 1065 KVNGISE 1071
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 2 KTNGISD 8
K NGIS+
Sbjct: 1064 KVNGISE 1070
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 2 KTNGISD 8
K NGIS+
Sbjct: 1063 KVNGISE 1069
>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)
Query: 1 VKTNGI 6
VKTNG+
Sbjct: 337 VKTNGV 342
263|Sequence|1311|1320|ISDGKRESPL
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 2 SDGKRESPL 10
SDGK + PL
Sbjct: 599 SDGKPQQPL 607
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 4 GKRESP 9
GKRESP
Sbjct: 369 GKRESP 374
>sp|SPIKE_ADE04|FIBER protein|Human adenovirus E serotype 4
Query: 2 SDGKRESPL 10
SDG +E PL
Sbjct: 36 SDGFQEKPL 44
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 4 GKRESP 9
GKRE P
Sbjct: 3349 GKREDP 3354
>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 DGKRESPL 10
D KRE PL
Sbjct: 248 DLKREGPL 255
>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 DGKRESPL 10
D KRE PL
Sbjct: 248 DLKREGPL 255
>sp|SPIK2_ADE40|FIBER protein 2|Human adenovirus F serotype 40
Query: 2 SDGKRESP 9
SDG +E+P
Sbjct: 34 SDGLQENP 41
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 1 ISDGKRESPL 10
+ GKRE+ L
Sbjct: 599 VRSGKREATL 608
>sp|SPIK2_ADE41|FIBER protein 2|Human adenovirus F serotype 41
Query: 2 SDGKRESP 9
SDG +E P
Sbjct: 34 SDGLQEKP 41
264|Sequence|1316|1325|RESPLKIDPF
>sp|EAR_EBVG|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RESPLKIDP 9
RE+PL++ P
Sbjct: 34 RETPLRLSP 42
>sp|EAR_EBVB9|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RESPLKIDP 9
RE+PL++ P
Sbjct: 34 RETPLRLSP 42
>sp|EAR_EBVA8|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 RESPLKIDP 9
RE+PL++ P
Sbjct: 34 RETPLRLSP 42
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 ESPLKIDPF 10
E P ++DPF
Sbjct: 997 ERPAEVDPF 1005
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 ESPLKIDPF 10
E P ++DPF
Sbjct: 997 ERPAEVDPF 1005
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 RESPLKIDPF 10
++SPLK++ F
Sbjct: 6688 QDSPLKLEDF 6697
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 1 RESPLKIDP 9
+ SP+KI P
Sbjct: 1010 KHSPIKISP 1018
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 1 RESPLKIDP 9
+ SP+KI P
Sbjct: 1010 KHSPIKISP 1018
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 5 LKIDPF 10
LK+DPF
Sbjct: 801 LKVDPF 806
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 5 LKIDPF 10
LK+DPF
Sbjct: 797 LKVDPF 802
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 3 SPLKIDP 9
SP+KI P
Sbjct: 1004 SPIKISP 1010
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 PLKIDP 9
PLK DP
Sbjct: 753 PLKTDP 758
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 1 RESPLKIDP 9
RE P+ +DP
Sbjct: 220 REIPVCLDP 228
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 RESPLKIDPF 10
R SP+ I P
Sbjct: 40 RNSPIVISPL 49
>sp|VPAP_HHV6Z|DNA polymerase processivity factor|Human herpesvirus 6B (strain Z29)
Query: 2 ESPLKID 8
+SPL+ID
Sbjct: 156 KSPLRID 162
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 RESPLKIDP 9
RE+P DP
Sbjct: 1119 RETPSHADP 1127
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 1 RESPLKIDP 9
RE+P DP
Sbjct: 1119 RETPSHADP 1127
>sp|VPAP_HHV6U|DNA polymerase processivity factor|Human herpesvirus 6A (strain
Query: 3 SPLKID 8
SPL+ID
Sbjct: 182 SPLRID 187
>sp|VL2_HPV42|MINOR capsid protein L2|Human papillomavirus 42
Query: 3 SPLKIDPF 10
+PL IDPF
Sbjct: 163 NPLYIDPF 170
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 RESPLKIDP 9
RE+P DP
Sbjct: 1119 RETPSPADP 1127
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 RESPLKIDP 9
RE+P DP
Sbjct: 1119 RETPSPADP 1127
>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)
Query: 1 RESPLKIDP 9
RE+ KIDP
Sbjct: 366 REAMGKIDP 374
>sp|VPAP_HHV6G|DNA polymerase processivity factor|Human herpesvirus 6A (strain GS)
Query: 3 SPLKID 8
SPL+ID
Sbjct: 177 SPLRID 182
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 RESPLKIDP 9
RE+P DP
Sbjct: 1124 RETPSHADP 1132
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 RESPLKIDP 9
RE+P DP
Sbjct: 1124 RETPSHADP 1132
>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)
Query: 1 RESPLKID 8
R SP+K+D
Sbjct: 383 RPSPIKLD 390
265|Sequence|1321|1330|KIDPFEDLSF
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 1 KIDPFEDLSF 10
K DP++D+SF
Sbjct: 433 KQDPYKDMSF 442
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 1 KIDPFEDLSF 10
K DP++DLSF
Sbjct: 448 KEDPYKDLSF 457
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 1 KIDPFEDLSF 10
K DP++DLSF
Sbjct: 448 KEDPYKDLSF 457
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 1 KIDPFEDLSF 10
K DP++DL F
Sbjct: 436 KKDPYDDLKF 445
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 1 KIDPFEDLSF 10
K DP+++LSF
Sbjct: 432 KPDPYKNLSF 441
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 1 KIDPFEDLSF 10
K DP+++LSF
Sbjct: 432 KPDPYKNLSF 441
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 1 KIDPFEDLSF 10
K+DP+++L F
Sbjct: 483 KVDPYKNLHF 492
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 1 KIDPFEDLSF 10
K+DP+++L F
Sbjct: 454 KVDPYKNLHF 463
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 1 KIDPFEDLSF 10
K+DP++ L+F
Sbjct: 451 KVDPYKGLNF 460
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 3 DPFEDLSF 10
DP++DL+F
Sbjct: 455 DPYKDLNF 462
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KIDPFEDLSF 10
KIDP E+ F
Sbjct: 589 KIDPLENADF 598
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 IDPFEDL 8
IDP EDL
Sbjct: 461 IDPVEDL 467
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 1 KIDPFEDLSF 10
KIDP E+ F
Sbjct: 589 KIDPLENADF 598
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 1 KIDPFEDLSF 10
KIDP E+ F
Sbjct: 589 KIDPLENADF 598
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 2 IDPFED 7
IDPF+D
Sbjct: 1117 IDPFDD 1122
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 2 IDPFED 7
IDPF+D
Sbjct: 1117 IDPFDD 1122
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 1 KIDPFEDLSF 10
K DP++ LSF
Sbjct: 453 KPDPYDGLSF 462
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 3 DPFEDLSF 10
DP++DL F
Sbjct: 444 DPYKDLRF 451
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 IDPFEDLS 9
I PF+DL+
Sbjct: 345 ISPFQDLT 352
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 IDPFEDLS 9
I PF+DL+
Sbjct: 345 ISPFQDLT 352
>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41
Query: 3 DPFEDLSF 10
DP++DL F
Sbjct: 470 DPYKDLKF 477
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 1 KIDPFEDLSF 10
K DP+ LSF
Sbjct: 434 KQDPYAKLSF 443
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 2 IDPFEDLSF 10
I+P ED +F
Sbjct: 567 INPLEDQAF 575
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 1 KIDPFEDLSF 10
K DP+ LSF
Sbjct: 434 KQDPYAKLSF 443
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 KIDPFEDLSF 10
K+D FE++ F
Sbjct: 693 KVDTFEEVPF 702
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 2 IDPFEDLSF 10
I+P ED +F
Sbjct: 567 INPLEDPTF 575
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 1 KIDPFEDLSF 10
K DP+ LSF
Sbjct: 432 KQDPYAGLSF 441
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 KIDPFEDLSF 10
K+D FE++ F
Sbjct: 694 KVDTFEEVPF 703
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 KIDPFEDLSF 10
K+D FE++ F
Sbjct: 693 KVDTFEEVPF 702
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 5 FEDLSF 10
FEDL+F
Sbjct: 253 FEDLTF 258
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 5 FEDLSF 10
FEDL+F
Sbjct: 253 FEDLTF 258
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 5 FEDLSF 10
FEDL+F
Sbjct: 253 FEDLTF 258
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 5 FEDLSF 10
FEDL+F
Sbjct: 253 FEDLTF 258
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 5 FEDLSF 10
FEDL+F
Sbjct: 253 FEDLTF 258
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 5 FEDLSF 10
FEDL+F
Sbjct: 253 FEDLTF 258
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 5 FEDLSF 10
FEDL+F
Sbjct: 253 FEDLTF 258
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 IDPFEDLSF 10
+DP DL+F
Sbjct: 743 VDPSTDLAF 751
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 KIDPFEDLSF 10
K+D FE++ F
Sbjct: 693 KVDTFEEVPF 702
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 IDPFED 7
IDPF D
Sbjct: 1820 IDPFPD 1825
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 KIDPFEDLSF 10
++D FE++ F
Sbjct: 694 RVDTFEEIPF 703
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 IDPFEDLSF 10
+DP DL+F
Sbjct: 740 VDPSTDLAF 748
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 DPFEDL 8
DP+ED
Sbjct: 152 DPYEDF 157
>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)
Query: 1 KIDPFEDLSF 10
+ID FE+ SF
Sbjct: 103 EIDGFEEGSF 112
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 2 IDPFEDLS 9
I P+EDL+
Sbjct: 1243 IGPYEDLA 1250
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 2 IDPFEDLS 9
I P+EDL+
Sbjct: 1266 IGPYEDLA 1273
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 2 IDPFEDLS 9
I P+EDL+
Sbjct: 1266 IGPYEDLA 1273
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 DPFEDL 8
DP+ED
Sbjct: 152 DPYEDF 157
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 1 KIDPFEDLSF 10
K DP++ L+F
Sbjct: 438 KKDPYDGLNF 447
>sp|VE8E2_HPV58|PROTEIN E8^E2C|Human papillomavirus 58
Query: 1 KIDPFEDL 8
++ PF+DL
Sbjct: 110 RLKPFKDL 117
>sp|VE2_HPV58|REGULATORY protein E2|Human papillomavirus 58
Query: 1 KIDPFEDL 8
++ PF+DL
Sbjct: 297 RLKPFKDL 304
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 1 KIDPFEDLSF 10
K DP++ L+F
Sbjct: 438 KKDPYDGLNF 447
>sp|PHOSP_PI3H4|PHOSPHOPROTEIN parainfluenza 3 virus (strain
Query: 3 DPFEDLS 9
DP EDLS
Sbjct: 39 DPQEDLS 45
>sp|PAP1_VARV|POLY(A) polymerase catalytic subunit|Variola virus
Query: 1 KIDPFEDLS 9
+ID EDLS
Sbjct: 291 QIDRLEDLS 299
>sp|PAP1_VAR67|POLY(A) polymerase catalytic subunit|Variola virus (isolate
Query: 1 KIDPFEDLS 9
+ID EDLS
Sbjct: 291 QIDRLEDLS 299
>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 DPFEDL 8
+PFED+
Sbjct: 138 EPFEDM 143
>sp|PAP1_VACCT|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 1 KIDPFEDLS 9
+ID EDLS
Sbjct: 291 QIDRLEDLS 299
>sp|PAP1_CWPXG|POLY(A) polymerase catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 1 KIDPFEDLS 9
+ID EDLS
Sbjct: 291 QIDRLEDLS 299
>sp|PAP1_CWPXB|POLY(A) polymerase catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 1 KIDPFEDLS 9
+ID EDLS
Sbjct: 291 QIDRLEDLS 299
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 PFEDLSF 10
PF+ LSF
Sbjct: 3061 PFQALSF 3067
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 4 PFEDLSF 10
PF+ LSF
Sbjct: 3034 PFQALSF 3040
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 4 PFEDLSF 10
PF+ LSF
Sbjct: 3039 PFQALSF 3045
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 1 KIDPFEDLSF 10
K DP+ L+F
Sbjct: 438 KQDPYAKLNF 447
>sp|PAP1_VACCC|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Copenhagen)
Query: 1 KIDPFEDLS 9
+ID EDLS
Sbjct: 291 QIDRLEDLS 299
>sp|PAP1_VACCA|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 KIDPFEDLS 9
+ID EDLS
Sbjct: 291 QIDRLEDLS 299
>sp|PAP1_MONPV|POLY(A) polymerase catalytic subunit|Monkeypox virus (MPXV)
Query: 1 KIDPFEDLS 9
+ID EDLS
Sbjct: 291 QIDRLEDLS 299
>sp|PAP1_HSPV|POLY(A) polymerase catalytic subunit|Horsepox virus (HSPV)
Query: 1 KIDPFEDLS 9
+ID EDLS
Sbjct: 291 QIDRLEDLS 299
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 2 IDPFEDLS 9
+DP++D S
Sbjct: 459 VDPYDDES 466
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 1 KIDPFEDLSF 10
++D F+D F
Sbjct: 220 RVDAFQDFDF 229
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KIDPFEDLSF 10
++D F+D F
Sbjct: 543 RVDAFQDFDF 552
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 IDPFEDLS 9
+DP++D S
Sbjct: 459 VDPYDDES 466
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 1 KIDPFEDLSF 10
K DP+ L+F
Sbjct: 466 KQDPYAKLNF 475
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 2 IDPFEDL 8
+D FEDL
Sbjct: 329 VDEFEDL 335
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 1 KIDPFEDLSF 10
K DP+ L+F
Sbjct: 436 KEDPYAKLNF 445
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 1 KIDPFEDLSF 10
K DP+ L+F
Sbjct: 465 KQDPYAKLNF 474
266|Sequence|1326|1335|EDLSFNLLAV
>sp|VU84_HHV6Z|PROTEIN U84|Human herpesvirus 6B (strain Z29)
Query: 2 DLSFNL 7
DLSFN+
Sbjct: 122 DLSFNM 127
267|Sequence|1331|1340|NLLAVSKAQL
***** No hits found ******
268|Sequence|1336|1345|SKAQLSVQTS
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 KAQLSVQTS 10
KAQ+ QTS
Sbjct: 463 KAQIDTQTS 471
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 KAQLSVQTS 10
KAQ+ QTS
Sbjct: 463 KAQVDTQTS 471
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 KAQLSVQTS 10
KAQ+ QTS
Sbjct: 463 KAQVDTQTS 471
269|Sequence|1341|1350|SVQTSPVPTP
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 SVQTSPVPTP 10
SV+T +PTP
Sbjct: 172 SVETKRIPTP 181
>sp|PG079_VARV|PROTEIN OPG079|Variola virus
Query: 2 VQTSPVPT 9
V+TSP PT
Sbjct: 9 VETSPRPT 16
>sp|PG079_VAR67|PROTEIN OPG079|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 VQTSPVPT 9
V+TSP PT
Sbjct: 9 VETSPRPT 16
>sp|PG079_VACCC|PROTEIN OPG079|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VQTSPVPT 9
V+TSP PT
Sbjct: 9 VETSPRPT 16
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 SVQTSPVPT 9
S Q +P+PT
Sbjct: 80 SCQANPIPT 88
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 SVQTSPVPT 9
S Q +P+PT
Sbjct: 80 SCQANPIPT 88
>sp|NP04_VZVO|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 QTSPVPTP 10
QT+P PTP
Sbjct: 197 QTTPTPTP 204
>sp|NP04_VZVD|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 QTSPVPTP 10
QT+P PTP
Sbjct: 197 QTTPTPTP 204
>sp|TOP1_VAR67|DNA topoisomerase 1|Variola virus (isolate Human/India/Ind3/1967)
Query: 5 SPVPTP 10
SP+P+P
Sbjct: 243 SPLPSP 248
>sp|PG079_MONPV|PROTEIN OPG079|Monkeypox virus (MPXV)
Query: 2 VQTSPVPT 9
V+TSP PT
Sbjct: 9 VETSPRPT 16
>sp|TOP1_VACCC|DNA topoisomerase 1B|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 SPVPTP 10
SP+P+P
Sbjct: 243 SPLPSP 248
>sp|TOP1_VACCA|DNA topoisomerase 1B|Vaccinia virus (strain Ankara) (VACV)
Query: 5 SPVPTP 10
SP+P+P
Sbjct: 243 SPLPSP 248
>sp|TOP1_MONPV|DNA topoisomerase I|Monkeypox virus (MPXV)
Query: 5 SPVPTP 10
SP+P+P
Sbjct: 243 SPLPSP 248
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 3 QTSPVPT 9
+T+PVPT
Sbjct: 603 ETAPVPT 609
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 3 QTSPVPT 9
+T+PVPT
Sbjct: 604 ETAPVPT 610
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 3 QTSPVPT 9
+T+PVPT
Sbjct: 604 ETAPVPT 610
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 3 QTSPVPT 9
+T+PVPT
Sbjct: 591 ETAPVPT 597
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 3 QTSPVPT 9
+T+PVPT
Sbjct: 597 ETAPVPT 603
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 3 QTSPVPT 9
+T+PVPT
Sbjct: 591 ETAPVPT 597
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 3 QTSPVPT 9
+T+PVPT
Sbjct: 597 ETAPVPT 603
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 3 QTSPVPT 9
+T+PVPT
Sbjct: 591 ETAPVPT 597
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 3 QTSPVPT 9
+T+PVPT
Sbjct: 591 ETAPVPT 597
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 3 QTSPVPT 9
+T+PVPT
Sbjct: 591 ETAPVPT 597
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 3 QTSPVPT 9
+T+PVPT
Sbjct: 591 ETAPVPT 597
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 3 QTSPVPT 9
+T+PVPT
Sbjct: 591 ETAPVPT 597
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 3 QTSPVPT 9
+T+PVPT
Sbjct: 590 ETAPVPT 596
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 3 QTSPVPT 9
+T+PVPT
Sbjct: 590 ETAPVPT 596
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 3 QTSPVPT 9
+T+PVPT
Sbjct: 590 ETAPVPT 596
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 3 QTSPVPT 9
+T+PVPT
Sbjct: 590 ETAPVPT 596
>sp|GE_HHV2H|ENVELOPE glycoprotein E|Human herpesvirus 2 (strain HG52)
Query: 2 VQTSPVPTP 10
V+ +PVPTP
Sbjct: 159 VEPAPVPTP 167
>sp|UL21_HCMVA|UNCHARACTERIZED protein UL21|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VQTSPVPTP 10
+ SPVPTP
Sbjct: 167 LTASPVPTP 175
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 5 SPVPTP 10
SPVP P
Sbjct: 168 SPVPGP 173
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 SVQTSPVPT 9
+ Q +P+PT
Sbjct: 80 ACQANPIPT 88
>sp|CORE5_ADE12|CORE-CAPSID bridging protein|Human adenovirus A serotype 12
Query: 1 SVQTSPVPT 9
+QTSP+ T
Sbjct: 237 EIQTSPIKT 245
>sp|UL10_HCMVM|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SVQTSPVPTP 10
+++T+P+P+P
Sbjct: 88 TMKTTPLPSP 97
>sp|UL10_HCMVA|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SVQTSPVPTP 10
+++T+P+P+P
Sbjct: 88 TMKTTPLPSP 97
>sp|REV_HV1U4|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 QTSPVPTP 10
Q+SP P P
Sbjct: 24 QSSPCPNP 31
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 4 TSPVPTP 10
TSP PTP
Sbjct: 415 TSPSPTP 421
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 4 TSPVPTP 10
TSP PTP
Sbjct: 415 TSPSPTP 421
270|Sequence|1346|1355|PVPTPDPKRL
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 VPTPDPKRL 10
+P PDP R+
Sbjct: 5198 LPYPDPSRI 5206
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 VPTPDPKRL 10
+P PDP R+
Sbjct: 5207 LPYPDPSRI 5215
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 VPTPDPKRL 10
+P PDP R+
Sbjct: 4867 LPYPDPSRI 4875
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 VPTPDPKRL 10
+P PDP R+
Sbjct: 5232 LPYPDPSRI 5240
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 VPTPDPKRL 10
+P PDP R+
Sbjct: 5252 LPYPDPSRI 5260
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 VPTPDPKRL 10
+P PDP R+
Sbjct: 5282 LPYPDPSRI 5290
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 VPTPDPKRL 10
+P PDP R+
Sbjct: 4892 LPYPDPSRI 4900
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 VPTPDPKRL 10
+P PDP R+
Sbjct: 5221 LPYPDPSRI 5229
>sp|TOP1_VAR67|DNA topoisomerase 1|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 PTPDPKRL 10
P P PK+L
Sbjct: 244 PLPSPKKL 251
>sp|TOP1_VACCC|DNA topoisomerase 1B|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PTPDPKRL 10
P P PK+L
Sbjct: 244 PLPSPKKL 251
>sp|TOP1_VACCA|DNA topoisomerase 1B|Vaccinia virus (strain Ankara) (VACV)
Query: 3 PTPDPKRL 10
P P PK+L
Sbjct: 244 PLPSPKKL 251
>sp|TOP1_MONPV|DNA topoisomerase I|Monkeypox virus (MPXV)
Query: 3 PTPDPKRL 10
P P PK+L
Sbjct: 244 PLPSPKKL 251
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 PVPTPDPK 8
P+P DPK
Sbjct: 2417 PIPDGDPK 2424
>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 TPDPKRL 10
TPDP RL
Sbjct: 185 TPDPSRL 191
>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 TPDPKRL 10
TPDP RL
Sbjct: 185 TPDPSRL 191
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 VPTPDPKRL 10
+P P+P R+
Sbjct: 5194 LPYPNPSRI 5202
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 3 PTPDPKRL 10
P P P RL
Sbjct: 461 PCPKPHRL 468
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PVPTPDPKRL 10
PV TP P+RL
Sbjct: 962 PVFTPAPRRL 971
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PVPTPDPKRL 10
PV TP P+RL
Sbjct: 966 PVFTPAPRRL 975
>sp|UL145_HCMVM|PROTEIN UL145|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PTPDPK 8
PT DPK
Sbjct: 110 PTSDPK 115
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 1 PVPTPD 6
PVP PD
Sbjct: 169 PVPGPD 174
>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)
Query: 1 PVPTPDPKR 9
P P+P P R
Sbjct: 320 PTPSPAPSR 328
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 PVPTPDP 7
P+P P P
Sbjct: 751 PLPAPKP 757
>sp|MC132_MCV1|PROTEIN MC132|Molluscum contagiosum virus subtype 1
Query: 1 PVPTPDPKRL 10
P P PDP L
Sbjct: 170 PWPRPDPPSL 179
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 PVPTPDP 7
P PTP+P
Sbjct: 417 PSPTPNP 423
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 PVPTPDP 7
P P PDP
Sbjct: 728 PQPEPDP 734
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 PVPTPDPKRL 10
P+P P +RL
Sbjct: 505 PLPNPFNRRL 514
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 PVPTPDPKRL 10
P+P P +RL
Sbjct: 505 PLPNPFNRRL 514
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 PVPTPDPKRL 10
P+P P +RL
Sbjct: 506 PMPNPFNRRL 515
>sp|TEG7_HHV2H|TEGUMENT protein UL51|Human herpesvirus 2 (strain HG52)
Query: 3 PTPDPK 8
PTPDP+
Sbjct: 219 PTPDPR 224
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 4 TPDPKRL 10
TPDP L
Sbjct: 1159 TPDPLEL 1165
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 2 VPTPDPKRL 10
+PT PKR+
Sbjct: 78 LPTEIPKRI 86
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 2 VPTPDPKRL 10
+PT PKR+
Sbjct: 78 LPTEIPKRI 86
>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)
Query: 3 PTPDPKR 9
P PDP R
Sbjct: 214 PPPDPGR 220
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 1 PVPTPDP 7
P TPDP
Sbjct: 316 PKKTPDP 322
>sp|PG130_VARV|39KDA core protein OPG130|Variola virus
Query: 1 PVPTPDPKR 9
P PTP P++
Sbjct: 86 PAPTPKPRQ 94
>sp|PG130_VAR67|39KDA core protein OPG130|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 PVPTPDPKR 9
P PTP P++
Sbjct: 86 PAPTPKPRQ 94
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 1 PVPTPDPKR 9
P P+P P R
Sbjct: 450 PTPSPAPSR 458
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PVPTPDP 7
P TPDP
Sbjct: 316 PKKTPDP 322
>sp|GI_HHV11|ENVELOPE glycoprotein I|Human herpesvirus 1 (strain 17)
Query: 1 PVPTPDPK 8
P PT DPK
Sbjct: 237 PFPTGDPK 244
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 PVPTPDPKRL 10
P+P P +RL
Sbjct: 507 PLPQPFNRRL 516
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 PVPTPDPKRL 10
P+P P +RL
Sbjct: 507 PLPQPFNRRL 516
>sp|V_MEASI|NON-STRUCTURAL protein V|Measles virus (strain IP-3-Ca) (MeV)
Query: 3 PTPDPKR 9
P PDP R
Sbjct: 214 PPPDPGR 220
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 1 PVPTPDPKR 9
P PT P++
Sbjct: 252 PTPTTPPRK 260
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 1 PVPTPDPK 8
PVP PD K
Sbjct: 204 PVPKPDGK 211
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 1 PVPTPDPK 8
PVP PD K
Sbjct: 204 PVPKPDGK 211
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 PVPTPDPKRL 10
P+P P +RL
Sbjct: 507 PLPQPFNRRL 516
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 2 VPTPD 6
VPTPD
Sbjct: 432 VPTPD 436
>sp|GE_HHV2H|ENVELOPE glycoprotein E|Human herpesvirus 2 (strain HG52)
Query: 1 PVPTPDP 7
PVPTP P
Sbjct: 163 PVPTPTP 169
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 2 VPTPD 6
VPTPD
Sbjct: 421 VPTPD 425
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 PVPTPDP 7
PVP P+P
Sbjct: 325 PVPLPNP 331
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 PVPTPD 6
PVP PD
Sbjct: 1690 PVPLPD 1695
>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 3 PTPDPKR 9
P PDP R
Sbjct: 214 PPPDPGR 220
>sp|CEP2_HHV2H|CYTOPLASMIC envelopment protein 2|Human herpesvirus 2 (strain HG52)
Query: 2 VPTPDPKR 9
+P PDP+R
Sbjct: 80 LPDPDPER 87
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 2 VPTPD 6
VPTPD
Sbjct: 423 VPTPD 427
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 2 VPTPD 6
VPTPD
Sbjct: 423 VPTPD 427
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 PVPTPDPKR 9
P+P P PKR
Sbjct: 1744 PIPPPRPKR 1752
>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)
Query: 3 PTPDPKR 9
P PDP R
Sbjct: 214 PPPDPGR 220
>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 PTPDPKR 9
P PDP R
Sbjct: 214 PPPDPGR 220
>sp|V_MEASE|NON-STRUCTURAL protein V|Measles virus (strain Edmonston) (MeV)
Query: 3 PTPDPKR 9
P PDP R
Sbjct: 214 PPPDPGR 220
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 2 VPTPD 6
VPTPD
Sbjct: 422 VPTPD 426
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 2 VPTPD 6
VPTPD
Sbjct: 418 VPTPD 422
>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 3 PTPDPKR 9
P PDP R
Sbjct: 214 PPPDPGR 220
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 1 PVPTPDPKR 9
P P+P P++
Sbjct: 175 PCPSPAPQQ 183
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PTPDPK 8
P PDP+
Sbjct: 160 PIPDPR 165
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 VPTPDPK 8
VP PDP+
Sbjct: 515 VPGPDPR 521
271|Sequence|1351|1360|DPKRLIQLPS
>sp|NCAP_TOSV|NUCLEOPROTEIN virus (Tos)
Query: 1 DPKRLIQL 8
DPKR++QL
Sbjct: 36 DPKRIVQL 43
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 KRLIQLPS 10
KRLI+LPS
Sbjct: 189 KRLIKLPS 196
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 3 KRLIQLP 9
KRL+++P
Sbjct: 250 KRLLEMP 256
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 3 KRLIQLP 9
+RL QLP
Sbjct: 128 RRLFQLP 134
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 3 KRLIQLP 9
+RL QLP
Sbjct: 126 RRLFQLP 132
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 PKRLIQLP 9
PK+ IQ P
Sbjct: 606 PKQTIQTP 613
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 2 PKRLIQLP 9
PK+ IQ P
Sbjct: 606 PKQTIQTP 613
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 2 PKRLIQLP 9
PK+ IQ P
Sbjct: 606 PKQTIQTP 613
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 2 PKRLIQLP 9
PK+ IQ P
Sbjct: 606 PKQTIQTP 613
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 2 PKRLIQLP 9
PK+ IQ P
Sbjct: 606 PKQTIQTP 613
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PKRLIQLP 9
PK+ IQ P
Sbjct: 606 PKQTIQTP 613
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 KRLIQL 8
KRLIQL
Sbjct: 2336 KRLIQL 2341
>sp|HEMA_INBHL|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 DPKRLIQLPS 10
D ++IQLP+
Sbjct: 115 DRTKIIQLPN 124
>sp|PKG2_ADE05|PACKAGING protein 2|Human adenovirus C serotype 5
Query: 2 PKRLIQLP 9
PK+ +QLP
Sbjct: 3 PKKKLQLP 10
272|Sequence|1356|1365|IQLPSATQSN
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 1 IQLPSATQSN 10
++LP+ QSN
Sbjct: 419 VKLPAEAQSN 428
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 1 IQLPSATQSN 10
++LP+ QSN
Sbjct: 419 VKLPAEAQSN 428
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 4 PSATQSN 10
PSATQS
Sbjct: 298 PSATQSG 304
273|Sequence|1361|1370|ATQSNVLSSV
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 TQSNVLSS 9
TQS VLSS
Sbjct: 6732 TQSRVLSS 6739
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 TQSNVLSS 9
TQS VLSS
Sbjct: 6682 TQSRVLSS 6689
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 TQSNVLSS 9
TQS VLS+
Sbjct: 6702 TQSRVLST 6709
274|Sequence|1366|1375|VLSSVSCMPT
>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935
Query: 6 SCMPT 10
SC+PT
Sbjct: 274 SCLPT 278
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 5 VSCMP 9
VSCMP
Sbjct: 368 VSCMP 372
275|Sequence|1371|1380|SCMPTMPPIP
>sp|E1BS_ADE12|E1B protein, small T-antigen|Human adenovirus A serotype 12
Query: 5 TMPPIP 10
TMPP+P
Sbjct: 141 TMPPLP 146
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 2 CMPTMPP 8
C+P+MPP
Sbjct: 720 CVPSMPP 726
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 MPTMPPIP 10
+ T PP+P
Sbjct: 718 LQTRPPVP 725
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 3 MPTMPPI 9
+PT+PP+
Sbjct: 595 VPTIPPL 601
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 3 MPTMPPI 9
+PT+PP+
Sbjct: 608 VPTIPPL 614
>sp|VIF_HV197|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 5 TMPPIP 10
T PP+P
Sbjct: 159 TKPPVP 164
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 3 MPTMPPI 9
+PT+PP+
Sbjct: 595 VPTIPPL 601
>sp|E1BS_ADE41|E1B protein, small T-antigen|Human adenovirus F serotype 41
Query: 2 CMPTMPP 8
C P PP
Sbjct: 135 CSPAQPP 141
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 3 MPTMPPI 9
+PT+PP+
Sbjct: 601 VPTIPPL 607
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 3 MPTMPPI 9
+PT+PP+
Sbjct: 595 VPTIPPL 601
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 3 MPTMPPI 9
+PT+PP+
Sbjct: 608 VPTIPPL 614
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 3 MPTMPPI 9
+PT+PP+
Sbjct: 601 VPTIPPL 607
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 3 MPTMPPI 9
+PT+PP+
Sbjct: 595 VPTIPPL 601
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 3 MPTMPPI 9
+PT+PP+
Sbjct: 607 VPTIPPL 613
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 3 MPTMPPI 9
+PT+PP+
Sbjct: 595 VPTIPPL 601
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 3 MPTMPPI 9
+PT+PP+
Sbjct: 595 VPTIPPL 601
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 3 MPTMPPI 9
+PT+PP+
Sbjct: 595 VPTIPPL 601
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 5 TMPPIP 10
T+PP+P
Sbjct: 363 TLPPLP 368
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 5 TMPPIP 10
T+PP+P
Sbjct: 362 TLPPLP 367
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 5 TMPPIP 10
T+PP+P
Sbjct: 362 TLPPLP 367
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 3 MPTMPPI 9
+PT+PP+
Sbjct: 594 VPTIPPL 600
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 3 MPTMPPI 9
+PT+PP+
Sbjct: 594 VPTIPPL 600
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 3 MPTMPPI 9
+PT+PP+
Sbjct: 594 VPTIPPL 600
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 3 MPTMPPI 9
+PT+PP+
Sbjct: 594 VPTIPPL 600
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 1 SCMPTM 6
SC+PT+
Sbjct: 45 SCVPTL 50
>sp|VIF_HV1V9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 5 TMPPIP 10
T PP+P
Sbjct: 159 TKPPLP 164
>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 5 TMPPIP 10
T PP+P
Sbjct: 159 TKPPLP 164
>sp|VIF_HV1MA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 5 TMPPIP 10
T PP+P
Sbjct: 159 TRPPLP 164
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SCMPTM 6
SC+PT+
Sbjct: 368 SCVPTL 373
>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935
Query: 1 SCMPT 5
SC+PT
Sbjct: 274 SCLPT 278
>sp|VIF_HV1VI|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 5 TMPPIP 10
T PP+P
Sbjct: 159 TKPPLP 164
>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 5 TMPPIP 10
T PP+P
Sbjct: 159 TKPPLP 164
>sp|C_PI1HE|PROTEIN C|Human parainfluenza 1 virus (strain
Query: 1 SCMPTMPP 8
S PT PP
Sbjct: 31 SSYPTSPP 38
>sp|VIF_HV193|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 5 TMPPIP 10
T PP+P
Sbjct: 159 TKPPLP 164
>sp|C_PI1HD|PROTEIN C|Human parainfluenza 1 virus (strain
Query: 1 SCMPTMPP 8
S PT PP
Sbjct: 31 SSYPTSPP 38
>sp|C_PI1HC|PROTEIN C|Human parainfluenza 1 virus (strain
Query: 1 SCMPTMPP 8
S PT PP
Sbjct: 31 SSYPTSPP 38
>sp|C_PI1HB|PROTEIN C|Human parainfluenza 1 virus (strain
Query: 1 SCMPTMPP 8
S PT PP
Sbjct: 31 SSYPTSPP 38
>sp|VIF_HV1SC|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 5 TMPPIP 10
T PP+P
Sbjct: 76 TKPPLP 81
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 2 CMPTMPPI 9
CMPT +
Sbjct: 355 CMPTFTTV 362
>sp|VL2_HPV60|MINOR capsid protein L2|Human papillomavirus type 60
Query: 3 MPTMPP 8
MPT+PP
Sbjct: 453 MPTIPP 458
276|Sequence|1376|1385|MPPIPARSQS
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PPIPARSQS 10
PP PAR Q+
Sbjct: 582 PPSPARGQN 590
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 2 PPIPARSQS 10
PP+PA++++
Sbjct: 358 PPLPAKTRA 366
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 1 MPPIPARSQS 10
+PP ARSQS
Sbjct: 296 LPPNSARSQS 305
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 1 MPPIPARSQS 10
+PP ARSQS
Sbjct: 296 LPPSSARSQS 305
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 1 MPPIPARSQS 10
+PP ARSQS
Sbjct: 307 LPPNSARSQS 316
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 1 MPPIPARSQS 10
+PP ARSQS
Sbjct: 296 LPPNSARSQS 305
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 1 MPPIPARSQS 10
+PP ARSQS
Sbjct: 296 LPPNSARSQS 305
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 1 MPPIPARSQS 10
+PP ARSQS
Sbjct: 296 LPPNSARSQS 305
>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)
Query: 2 PPIPARSQS 10
PPIP+ + +
Sbjct: 30 PPIPSETTT 38
>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PPIPARSQS 10
PPIP+ + +
Sbjct: 30 PPIPSETTT 38
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 1 MPPIPARSQS 10
+PP ARSQS
Sbjct: 307 IPPSSARSQS 316
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 1 MPPIPARSQS 10
+PP ARSQS
Sbjct: 307 IPPSSARSQS 316
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 1 MPPIPARSQS 10
+ P PARSQS
Sbjct: 307 ISPSPARSQS 316
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 1 MPPIPARSQS 10
+PP ARSQS
Sbjct: 307 IPPSSARSQS 316
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 1 MPPIPARSQS 10
+PP ARSQS
Sbjct: 302 IPPSSARSQS 311
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 MPPIPARSQS 10
PP ARSQS
Sbjct: 309 FPPSSARSQS 318
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 MPPIPARSQS 10
PP ARSQS
Sbjct: 309 FPPSSARSQS 318
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 MPPIPARSQS 10
+PP ARSQS
Sbjct: 309 VPPNSARSQS 318
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 1 MPPIPARSQS 10
PP ARSQS
Sbjct: 296 FPPNSARSQS 305
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 1 MPPIPARSQS 10
+PP ARSQS
Sbjct: 307 IPPSCARSQS 316
>sp|VE6_HPV21|PROTEIN E6|Human papillomavirus 21
Query: 2 PPIPA 6
PP+PA
Sbjct: 31 PPLPA 35
>sp|VE6_HPV19|PROTEIN E6|Human papillomavirus 19
Query: 2 PPIPA 6
PP+PA
Sbjct: 26 PPLPA 30
>sp|VE6_HPV14|PROTEIN E6|Human papillomavirus 14
Query: 2 PPIPA 6
PP+PA
Sbjct: 34 PPLPA 38
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 2 PPIPARSQ 9
PP+P R Q
Sbjct: 371 PPLPPRVQ 378
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 2 PPIPARSQ 9
PP+P R Q
Sbjct: 371 PPLPPRVQ 378
>sp|VE6_HPV25|PROTEIN E6|Human papillomavirus 25
Query: 2 PPIPA 6
PP+PA
Sbjct: 21 PPLPA 25
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 PPIPAR 7
PPIP+R
Sbjct: 725 PPIPSR 730
>sp|NCAP_PI2HT|NUCLEOPROTEIN parainfluenza 2 virus (strain
Query: 2 PPIPARS 8
PPIP R+
Sbjct: 486 PPIPQRT 492
>sp|VE6_HPV20|PROTEIN E6|Human papillomavirus 20
Query: 2 PPIPA 6
PP+PA
Sbjct: 28 PPLPA 32
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 1 MPPIPARSQ 9
+PP ARSQ
Sbjct: 296 LPPNSARSQ 304
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 MPPIPARSQS 10
+PP+PA + +
Sbjct: 363 LPPLPANTSA 372
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 MPPIPARSQS 10
+PP+PA + +
Sbjct: 364 LPPLPANTSA 373
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 MPPIPARSQS 10
+PP+PA + +
Sbjct: 363 LPPLPANTSA 372
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 MPPIPARSQS 10
+PP +RSQS
Sbjct: 307 VPPNSSRSQS 316
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 MPPIPARSQS 10
PP +RSQS
Sbjct: 307 FPPNSSRSQS 316
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 MPPIPARSQS 10
PP +RSQS
Sbjct: 307 FPPNSSRSQS 316
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 MPPIPARSQS 10
PP +RSQS
Sbjct: 307 FPPNSSRSQS 316
>sp|B9_HHV6Z|PROTEIN B9|Human herpesvirus 6B (strain Z29)
Query: 4 IPARSQS 10
+PAR+QS
Sbjct: 33 VPARAQS 39
Query: 4 IPARSQS 10
+PAR+QS
Sbjct: 54 VPARAQS 60
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 MPPIPARSQS 10
PP +RSQS
Sbjct: 307 FPPNSSRSQS 316
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 MPPIPARSQS 10
PP +RSQS
Sbjct: 307 FPPNSSRSQS 316
277|Sequence|1381|1390|ARSQSQENMR
>sp|VP30_EBOZM|TRANSCRIPTIONAL activator VP30|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 ARSQSQENMR 10
ARS S+EN R
Sbjct: 27 ARSSSRENYR 36
>sp|VP30_EBOZ5|TRANSCRIPTIONAL activator VP30|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 ARSQSQENMR 10
ARS S+EN R
Sbjct: 27 ARSSSRENYR 36
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 ARSQSQ 6
ARSQSQ
Sbjct: 314 ARSQSQ 319
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 ARSQSQ 6
ARSQSQ
Sbjct: 314 ARSQSQ 319
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 ARSQSQ 6
ARSQSQ
Sbjct: 314 ARSQSQ 319
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 ARSQSQ 6
ARSQSQ
Sbjct: 307 ARSQSQ 312
>sp|GL_HHV8P|ENVELOPE glycoprotein L|Human herpesvirus 8 type P
Query: 5 SQENMR 10
SQEN+R
Sbjct: 96 SQENLR 101
278|Sequence|1386|1395|QENMRSSPNP
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 QENMRSSP 8
Q+N+R+SP
Sbjct: 1518 QKNLRTSP 1525
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 1 QENMRSSPNP 10
QEN PNP
Sbjct: 144 QENGTCEPNP 153
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 1 QENMRSSPNP 10
QEN PNP
Sbjct: 144 QENGTCEPNP 153
>sp|ORF3_TTVB1|UNCHARACTERIZED ORF3 protein|Torque teno mini virus 1
Query: 1 QENMRSSPNP 10
Q+N ++SP P
Sbjct: 20 QQNKKNSPRP 29
279|Sequence|1391|1400|SSPNPFITGL
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 SPNPFITGL 10
SPNP ++GL
Sbjct: 1025 SPNPLLSGL 1033
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 SSPNPFITGL 10
+SPNP + GL
Sbjct: 1083 TSPNPMLKGL 1092
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 SSPNPFITGL 10
+SPNP + GL
Sbjct: 1083 NSPNPMLKGL 1092
>sp|PG164_VACCC|PROTEIN OPG164|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SSPNPFITGL 10
S NPFIT L
Sbjct: 173 SKSNPFITEL 182
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 3 PNPFITGL 10
PNPFI +
Sbjct: 540 PNPFIANM 547
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 PNPFITGL 10
PNPFI +
Sbjct: 540 PNPFIANM 547
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PNPFITGL 10
PNPFI +
Sbjct: 540 PNPFIANM 547
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 3 PNPFITGL 10
PNPFI +
Sbjct: 540 PNPFIANM 547
>sp|PG164_VAR67|PROTEIN OPG164|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 SSPNPFITGL 10
S NPFIT L
Sbjct: 172 SKSNPFITEL 181
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 SSPNPFI 7
SSPNP I
Sbjct: 2642 SSPNPTI 2648
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SSPNPFI 7
SSPNP I
Sbjct: 2641 SSPNPTI 2647
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 SSPNPFI 7
SSPNP I
Sbjct: 2643 SSPNPTI 2649
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 SSPNPFI 7
SSPNP I
Sbjct: 2643 SSPNPTI 2649
>sp|VP7_ROTH6|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 SSPNPFIT 8
S+P PF+T
Sbjct: 71 SNPEPFLT 78
>sp|VP7_ROTHB|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 SSPNPFIT 8
S+P PF+T
Sbjct: 71 SNPEPFLT 78
>sp|VL2_HPV11|MINOR capsid protein L2|Human papillomavirus 11
Query: 1 SSPNPFITG 9
SSP P ITG
Sbjct: 75 SSPKPAITG 83
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SSPNPFI 7
SSPNP +
Sbjct: 2641 SSPNPTV 2647
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SSPNPFI 7
SSPNP +
Sbjct: 2638 SSPNPTV 2644
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SSPNPFI 7
SSPNP +
Sbjct: 2641 SSPNPTV 2647
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SSPNPFI 7
SSPNP +
Sbjct: 2641 SSPNPTV 2647
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SSPNPFI 7
SSPNP +
Sbjct: 2641 SSPNPTV 2647
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 4 NPFITGL 10
NP I+GL
Sbjct: 1667 NPLISGL 1673
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 4 NPFITGL 10
NP I+GL
Sbjct: 1667 NPLISGL 1673
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 4 NPFITGL 10
NP I+GL
Sbjct: 1667 NPLISGL 1673
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 4 NPFITGL 10
NP I+GL
Sbjct: 1667 NPLISGL 1673
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 4 NPFITGL 10
NP I+GL
Sbjct: 1667 NPLISGL 1673
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 4 NPFITGL 10
NP I+GL
Sbjct: 1667 NPLISGL 1673
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 4 NPFITGL 10
NP I+GL
Sbjct: 1667 NPLISGL 1673
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 4 NPFITGL 10
NP I+GL
Sbjct: 1668 NPLISGL 1674
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 4 NPFITGL 10
NP I+GL
Sbjct: 1667 NPLISGL 1673
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 4 NPFITGL 10
NP I+GL
Sbjct: 1667 NPLISGL 1673
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 4 NPFITGL 10
NP I+GL
Sbjct: 1668 NPLISGL 1674
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 4 NPFITGL 10
NP I+GL
Sbjct: 1667 NPLISGL 1673
>sp|NSP4_ROTGA|NON-STRUCTURAL glycoprotein 4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 SSPNPFITG 9
SSP +TG
Sbjct: 38 SSPQKILTG 46
>sp|BTRF1_EBVA8|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 SPNPFI 7
+PNP+I
Sbjct: 79 APNPYI 84
>sp|BTRF1_EBVG|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 SPNPFI 7
+PNP+I
Sbjct: 79 APNPYI 84
>sp|BTRF1_EBVB9|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 SPNPFI 7
+PNP+I
Sbjct: 79 APNPYI 84
280|Sequence|1396|1405|FITGLTRTNP
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 FITGLTRTN 9
F+T L+RTN
Sbjct: 1334 FLTTLSRTN 1342
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 FITGLTRTN 9
F+T LTRT+
Sbjct: 1334 FLTTLTRTS 1342
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 FITGLTRTN 9
+ITGLT N
Sbjct: 2105 YITGLTTDN 2113
>sp|GAG_SFV3L|GAG polyprotein|Simian foamy virus type 3
Query: 2 ITGLTRTNP 10
+TG T TNP
Sbjct: 295 VTGNTPTNP 303
>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 FITGLTRTNP 10
IT +TRT P
Sbjct: 321 MITYITRTQP 330
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 FITGLTRTN 9
++TGLT N
Sbjct: 2105 YVTGLTNDN 2113
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 FITGLTRTN 9
++TGLT N
Sbjct: 2105 YVTGLTSDN 2113
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 FITGLTRTN 9
+ITG+T+ N
Sbjct: 2102 YITGVTQDN 2110
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 FITGLTRTN 9
+ITG+T+ N
Sbjct: 2102 YITGVTQDN 2110
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 FITGLTRTN 9
++TGLT N
Sbjct: 2105 YVTGLTSDN 2113
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 FITGLTRTN 9
++TGLT N
Sbjct: 2105 YVTGLTADN 2113
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 FITGLTRTN 9
++TGLT N
Sbjct: 2105 YVTGLTTDN 2113
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 FITGLTRTN 9
F+T L+RT+
Sbjct: 1054 FLTTLSRTS 1062
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 FITGLTRTN 9
F+T L+RT+
Sbjct: 1334 FLTTLSRTS 1342
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 FITGLTRTN 9
F+T L+RT+
Sbjct: 1334 FLTTLSRTS 1342
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 FITGLTRTN 9
F+T L+RT+
Sbjct: 1334 FLTTLSRTS 1342
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 FITGLTRTN 9
F+T L+RT+
Sbjct: 1334 FLTTLSRTS 1342
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 FITGLTRTN 9
F+T L+RT+
Sbjct: 1334 FLTTLSRTS 1342
281|Sequence|1401|1410|TRTNPFSDRT
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 RTNPFSDRT 10
RTNPFS +T
Sbjct: 1010 RTNPFSCKT 1018
>sp|YVDA_VACCC|UNCHARACTERIZED 9.2 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TRTNPFSDRT 10
TRTNP+S T
Sbjct: 40 TRTNPYSLNT 49
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 2 RTNPFSDR 9
+ NPF+DR
Sbjct: 433 KYNPFTDR 440
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 2 RTNPFSDR 9
+ NPF+DR
Sbjct: 433 KYNPFTDR 440
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 2 RTNPFSDR 9
+ NPF+DR
Sbjct: 433 KYNPFTDR 440
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 2 RTNPFSDR 9
+ NPF+DR
Sbjct: 433 KYNPFTDR 440
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 RTNPFSDRT 10
R NPFS +T
Sbjct: 1010 RANPFSCKT 1018
>sp|NP1_HBOC4|NON-STRUCTURAL protein NP-1|Human bocavirus 4 (HBoV4) (Human
Query: 1 TRTNPFS 7
TRTNP++
Sbjct: 82 TRTNPYT 88
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 TRTNPFSDRT 10
TRT FSD +
Sbjct: 1209 TRTPSFSDNS 1218
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 TRTNPFSDRT 10
T T P SD T
Sbjct: 113 THTQPLSDNT 122
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 2 RTNPFSDR 9
R NPF D+
Sbjct: 379 RYNPFKDK 386
>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)
Query: 1 TRTNPFSDRT 10
T T P SD T
Sbjct: 113 THTQPLSDNT 122
>sp|NP1_HBOC3|NON-STRUCTURAL protein NP-1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 TRTNPF 6
+RTNP+
Sbjct: 85 SRTNPY 90
>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)
Query: 1 TRTNP 5
TRTNP
Sbjct: 510 TRTNP 514
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 4 NPFSDR 9
NPF+D+
Sbjct: 418 NPFTDK 423
>sp|BET_FOAMV|PROTEIN Bet|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 RTNPFSDR 9
+ NP+ DR
Sbjct: 287 KENPYGDR 294
282|Sequence|1406|1415|FSDRTAAPGN
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 SDRTAAPGN 10
SD+ APG+
Sbjct: 6907 SDKEVAPGS 6915
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 SDRTAAPGN 10
SD+ APG+
Sbjct: 6927 SDKEVAPGS 6935
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 SDRTAAPGN 10
SD+ APG+
Sbjct: 6957 SDKEVAPGS 6965
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 FSDRTAAPG 9
+ DR ++PG
Sbjct: 1447 YQDRLSSPG 1455
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 FSDRTAAPG 9
+ DR ++PG
Sbjct: 1447 YQDRLSSPG 1455
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 1 FSDRTAA 7
FS+RTAA
Sbjct: 431 FSERTAA 437
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 SDRTAAPG 9
SD+ APG
Sbjct: 6502 SDKGVAPG 6509
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 1 FSDRTAAPGN 10
FSD T PG+
Sbjct: 125 FSDYTPRPGD 134
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FSDRTAA 7
F DRTAA
Sbjct: 798 FGDRTAA 804
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 1 FSDRTAAPGN 10
FSD T PG+
Sbjct: 125 FSDYTPRPGD 134
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 FSDRTAAPGN 10
FSD T PG+
Sbjct: 125 FSDYTPRPGD 134
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FSDRTAA 7
F DRTAA
Sbjct: 799 FGDRTAA 805
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 SDRTAAPG 9
SD+ APG
Sbjct: 6849 SDKGVAPG 6856
>sp|SPIK2_ADE41|FIBER protein 2|Human adenovirus F serotype 41
Query: 3 DRTAAPGN 10
++TA PGN
Sbjct: 331 NKTAHPGN 338
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 3 DRTAAPGN 10
D TAA GN
Sbjct: 55 DDTAAQGN 62
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 SDRTAAPG 9
SDR PG
Sbjct: 431 SDRNLTPG 438
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 SDRTAAPG 9
SDR PG
Sbjct: 431 SDRNLTPG 438
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 SDRTAAPG 9
SD+ APG
Sbjct: 6872 SDKGVAPG 6879
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 SDRTAAPG 9
SDR PG
Sbjct: 431 SDRNLTPG 438
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 SDRTAAPG 9
SDR PG
Sbjct: 431 SDRNLTPG 438
>sp|SPIK2_ADE40|FIBER protein 2|Human adenovirus F serotype 40
Query: 3 DRTAAPGN 10
++TA PGN
Sbjct: 331 NKTADPGN 338
>sp|US10_HHV11|VIRION protein US10|Human herpesvirus 1 (strain 17)
Query: 2 SDRTAAPGN 10
SDR +PG+
Sbjct: 29 SDRQQSPGH 37
>sp|US10_HHV1F|VIRION protein US10|Human herpesvirus 1 (strain F)
Query: 2 SDRTAAPGN 10
SDR +PG+
Sbjct: 29 SDRQQSPGH 37
>sp|UL84_HCMVT|UL84 protein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 DRTAAPGN 10
DRT AP +
Sbjct: 380 DRTEAPAD 387
>sp|UL84_HCMVA|PROTEIN UL84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 DRTAAPGN 10
DRT AP +
Sbjct: 379 DRTEAPAD 386
>sp|UL84_HCMVM|PROTEIN UL84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 DRTAAPGN 10
DRT AP +
Sbjct: 380 DRTEAPAD 387
283|Sequence|1411|1420|AAPGNPFRAK
>sp|HEMA_INBHL|HEMAGGLUTININ B virus (strain B/Hong
Query: 2 APGNPFR 8
APG P+R
Sbjct: 145 APGGPYR 151
>sp|HEMA_INBBK|HEMAGGLUTININ B virus (strain B/Bangkok/163/1990)
Query: 2 APGNPFR 8
APG P+R
Sbjct: 145 APGGPYR 151
>sp|HEMA_INBTE|HEMAGGLUTININ B virus (strain B/Texas/1/1991)
Query: 2 APGNPFR 8
APG P+R
Sbjct: 145 APGGPYR 151
>sp|HEMA_INBSD|HEMAGGLUTININ B virus (strain B/South
Query: 2 APGNPFR 8
APG P+R
Sbjct: 145 APGGPYR 151
>sp|HEMA_INBNY|HEMAGGLUTININ B virus (strain B/New
Query: 2 APGNPFR 8
APG P+R
Sbjct: 145 APGGPYR 151
>sp|HEMA_INBHM|HEMAGGLUTININ B virus (strain B/Hong
Query: 2 APGNPFR 8
APG P+R
Sbjct: 145 APGGPYR 151
>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)
Query: 2 APGNPFR 8
APG P+R
Sbjct: 145 APGGPYR 151
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 2 APGNPFR 8
APG P++
Sbjct: 145 APGGPYK 151
>sp|HEMA_INBTF|HEMAGGLUTININ B virus (strain B/Texas/4/1990)
Query: 2 APGNPFR 8
APG P+R
Sbjct: 145 APGGPYR 151
>sp|HEMA_INBP9|HEMAGGLUTININ B virus (strain B/Panama/45/1990)
Query: 2 APGNPFR 8
APG P+R
Sbjct: 145 APGGPYR 151
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 2 APGNPFR 8
APG P++
Sbjct: 145 APGGPYK 151
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 2 APGNPFR 8
APG P++
Sbjct: 138 APGGPYK 144
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 2 APGNPFR 8
APG P++
Sbjct: 145 APGGPYK 151
>sp|HEMA_INBVL|HEMAGGLUTININ B virus (strain B/Victoria/103/1989)
Query: 1 AAPGNPFR 8
APG P+R
Sbjct: 144 GAPGGPYR 151
>sp|HEMA_INBYB|HEMAGGLUTININ B virus (strain B/Yamagata/16/1988)
Query: 2 APGNPFR 8
APG P+R
Sbjct: 130 APGGPYR 136
>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)
Query: 2 APGNPF 7
+PG+PF
Sbjct: 182 SPGSPF 187
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 NPFRAK 10
+PFRAK
Sbjct: 751 DPFRAK 756
>sp|HEMA_INBAA|HEMAGGLUTININ B virus (strain B/Ann
Query: 1 AAPGNPF 7
AAPG P+
Sbjct: 136 AAPGGPY 142
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 PGNPFRAK 10
PG PF K
Sbjct: 718 PGGPFPKK 725
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 1 AAPGNPF 7
AAP NP
Sbjct: 718 AAPDNPL 724
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 APGNP 6
APGNP
Sbjct: 677 APGNP 681
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 2 APGNPF 7
APG P+
Sbjct: 135 APGGPY 140
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 APGNP 6
APGNP
Sbjct: 678 APGNP 682
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 APGNP 6
APGNP
Sbjct: 677 APGNP 681
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 PFRAK 10
PFRAK
Sbjct: 752 PFRAK 756
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 APGNP 6
APGNP
Sbjct: 678 APGNP 682
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 APGNP 6
APGNP
Sbjct: 678 APGNP 682
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 APGNP 6
APGNP
Sbjct: 678 APGNP 682
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 2 APGNPF 7
APG P+
Sbjct: 138 APGGPY 143
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 2 APGNPF 7
APG P+
Sbjct: 138 APGGPY 143
>sp|HEMA_INBVM|HEMAGGLUTININ B virus (strain B/Victoria/19/1989)
Query: 2 APGNPFR 8
APG P++
Sbjct: 145 APGGPYK 151
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 2 APGNPF 7
APG P+
Sbjct: 138 APGGPY 143
>sp|HEMA_INBP3|HEMAGGLUTININ B virus (strain B/Paris/329/1990)
Query: 2 APGNPFR 8
APG P++
Sbjct: 145 APGGPYK 151
>sp|HEMA_INBIN|HEMAGGLUTININ B virus (strain B/India/3/1989)
Query: 2 APGNPFR 8
APG P++
Sbjct: 145 APGGPYK 151
284|Sequence|1416|1425|PFRAKSEESE
>sp|V_PI4HB|NON-STRUCTURAL protein V|Human parainfluenza 4b virus (strain
Query: 1 PFRAKSEESE 10
P R+ +EESE
Sbjct: 71 PLRSHNEESE 80
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 1 PFRAKSEESE 10
PF+ SEE E
Sbjct: 376 PFKEFSEEFE 385
285|Sequence|1421|1430|SEESEATSWF
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 3 ESEATSWF 10
ESE + WF
Sbjct: 1235 ESELSHWF 1242
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 2 EESEATSW 9
EES +SW
Sbjct: 16 EESPGSSW 23
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 2 EESEATSW 9
EES +SW
Sbjct: 16 EESPGSSW 23
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 EESEATSWF 10
E+S+ATS F
Sbjct: 3051 EDSDATSLF 3059
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 SEESEATSWF 10
SEES +W+
Sbjct: 1311 SEESWYEAWY 1320
286|Sequence|1426|1435|ATSWFSKEEP
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 2 TSWFSKEE 9
TSWF +EE
Sbjct: 1217 TSWFKQEE 1224
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 ATSWFSKE 8
ATS FSKE
Sbjct: 850 ATSNFSKE 857
287|Sequence|1431|1440|SKEEPVTISP
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 4 EPVTISP 10
EPVT SP
Sbjct: 970 EPVTFSP 976
>sp|EAR_EBVG|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SKEEPVTISP 10
++E P+ +SP
Sbjct: 33 ARETPLRLSP 42
>sp|EAR_EBVB9|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SKEEPVTISP 10
++E P+ +SP
Sbjct: 33 ARETPLRLSP 42
>sp|EAR_EBVA8|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SKEEPVTISP 10
++E P+ +SP
Sbjct: 33 ARETPLRLSP 42
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 KEEPVTI 8
KEEPV I
Sbjct: 639 KEEPVNI 645
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 KEEPVTI 8
KEEPV I
Sbjct: 639 KEEPVNI 645
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 KEEPVTI 8
KEEPV I
Sbjct: 639 KEEPVNI 645
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 KEEPVTI 8
KEEPV I
Sbjct: 639 KEEPVNI 645
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 KEEPVTI 8
KEEPV I
Sbjct: 639 KEEPVNI 645
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 KEEPVTISP 10
+ PV ISP
Sbjct: 40 RNSPVVISP 48
288|Sequence|1436|1445|VTISPFPSLQ
>sp|NS1_I02A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I05A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 151 ISPLPSL 157
>sp|NS1_I02A6|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 155 ISPLPSL 161
>sp|NS1_I02A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 155 ISPLPSL 161
>sp|NS1_I02A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I61A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I03A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 155 ISPLPSL 161
>sp|NS1_I01A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 155 ISPLPSL 161
>sp|NS1_I71A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/1/1971
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I03A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 155 ISPLPSL 161
>sp|NS1_I02A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 138 ISPLPSL 144
>sp|NS1_I02A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I70A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Qu/7/1970
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I69A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/England/878/1969
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I68A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Korea/426/1968
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I68A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Aichi/2/1968
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I67A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I01A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 155 ISPLPSL 161
>sp|NS1_I00A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Duck/Hong
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 155 ISPLPSL 161
>sp|NS1_I02A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I68A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I02A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Guinea
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I97A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I57A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Singapore/1/1957
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I96A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I83A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chile/1/1983
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I78A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I73A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/London/1416/1973
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I67A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Tokyo/3/1967
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I47A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Fort
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I01A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 155 ISPLPSL 161
>sp|NS1_I00A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/New
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I80A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I78A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I77AB|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USSR/90/1977
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I77AA|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Brazil/11/1978
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I77A9|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/New
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I54A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I51A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Albany/12/1951
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I01A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 155 ISPLPSL 161
>sp|NS1_I96A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I80AA|NON-STRUCTURAL protein 1|Influenza A virus (strain A/India/6263/1980
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I59A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I57A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Japan/305/1957
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I45A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I40A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hickox/1940
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I18A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Brevig
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I85A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I35A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Phila/1935
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I97A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I50A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Fort
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I36A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Henry/1936
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I33A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Wilson-Smith/1933
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I54A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/1/1954
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I34A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Puerto
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I06A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I000X|NON-STRUCTURAL protein 1|Influenza A virus (strain A/X-31
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I24A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Japan/1924
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 157 ISPLPSL 163
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 TISPFP 7
TI PFP
Sbjct: 1819 TIDPFP 1824
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 1 VTISPFPS 8
VT+ PFP+
Sbjct: 569 VTVIPFPN 576
>sp|NS1_I60A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Ann
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 1 VTISPFPS 8
VT+ PFP+
Sbjct: 573 VTVIPFPN 580
>sp|NS1_I57A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I57A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I57A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/1957
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 160 ISPLPSL 166
>sp|NS1_I43A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Iowa/1943
Query: 3 ISPFPSL 9
ISP PSL
Sbjct: 154 ISPLPSL 160
>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12
Query: 4 SPFPSL 9
SPFPSL
Sbjct: 454 SPFPSL 459
>sp|MCES_YMTV5|MRNA-CAPPING enzyme small subunit|Yaba monkey tumor virus (strain
Query: 4 SPFPSLQ 10
SP PSL+
Sbjct: 32 SPLPSLE 38
>sp|MCES_VACCC|MRNA-CAPPING enzyme regulatory subunit OPG124|Vaccinia virus (strain
Query: 4 SPFPSLQ 10
SP PSL+
Sbjct: 32 SPLPSLE 38
>sp|MCES_VACCA|MRNA-CAPPING enzyme regulatory subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 4 SPFPSLQ 10
SP PSL+
Sbjct: 32 SPLPSLE 38
>sp|MCES_MONPV|MRNA-CAPPING enzyme regulatory subunit OPG124|Monkeypox virus (MPXV)
Query: 4 SPFPSLQ 10
SP PSL+
Sbjct: 32 SPLPSLE 38
>sp|MCES_VARV|MRNA-CAPPING enzyme regulatory subunit|Variola virus
Query: 4 SPFPSLQ 10
SP PSL+
Sbjct: 32 SPLPSLE 38
>sp|MCES_VAR67|MRNA-CAPPING enzyme regulatory subunit OPG124|Variola virus (isolate
Query: 4 SPFPSLQ 10
SP PSL+
Sbjct: 32 SPLPSLE 38
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 4 SPFPSL 9
SPFPSL
Sbjct: 465 SPFPSL 470
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 4 SPFPSL 9
SPFPSL
Sbjct: 465 SPFPSL 470
>sp|NS1_I82A8|NON-STRUCTURAL protein 1|Influenza A virus (strain
Query: 3 ISPFPSL 9
ISP PS+
Sbjct: 160 ISPIPSM 166
>sp|TOP1_VAR67|DNA topoisomerase 1|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 TISPFPS 8
+ISP PS
Sbjct: 241 SISPLPS 247
>sp|TOP1_VACCC|DNA topoisomerase 1B|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 TISPFPS 8
+ISP PS
Sbjct: 241 SISPLPS 247
>sp|TOP1_VACCA|DNA topoisomerase 1B|Vaccinia virus (strain Ankara) (VACV)
Query: 2 TISPFPS 8
+ISP PS
Sbjct: 241 SISPLPS 247
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 VTISPFPSL 9
VT++PF S+
Sbjct: 646 VTVNPFVSV 654
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 VTISPFPSL 9
VT++PF S+
Sbjct: 642 VTVNPFVSV 650
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 VTISPFPSL 9
VT++PF S+
Sbjct: 646 VTVNPFVSV 654
>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)
Query: 3 ISPFPSL 9
+SPFP+L
Sbjct: 359 MSPFPAL 365
>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)
Query: 3 ISPFPSL 9
+SPFP+L
Sbjct: 361 LSPFPAL 367
>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)
Query: 3 ISPFPSL 9
+SPFP+L
Sbjct: 361 LSPFPAL 367
>sp|BILF2_EBVB9|GLYCOPROTEIN BILF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VTISPFP 7
VT+ PFP
Sbjct: 191 VTLGPFP 197
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 VTISPFPS 8
VT++PF S
Sbjct: 644 VTVNPFIS 651
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 VTISPFPS 8
VTI+P+ S
Sbjct: 314 VTIAPYKS 321
289|Sequence|1441|1450|FPSLQPLGHN
>sp|VP6_ROTHL|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 FPSLQPLGHN 10
FP+ QP GH+
Sbjct: 308 FPNAQPFGHH 317
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 4 LQPLGH 9
+QPLGH
Sbjct: 719 IQPLGH 724
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 2 PSLQPLGH 9
P + PLGH
Sbjct: 90 PYVSPLGH 97
>sp|VP6_ROTH1|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 1 FPSLQPLGHN 10
FP+ QP H+
Sbjct: 308 FPNAQPFEHH 317
>sp|TRX1_HHV7J|TRIPLEX capsid protein 1|Human herpesvirus 7 (strain JI)
Query: 1 FPSLQPLGH 9
F SLQ +GH
Sbjct: 241 FGSLQRIGH 249
>sp|VP6_ROTH7|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 1 FPSLQPLGHN 10
FP+ QP H+
Sbjct: 308 FPNAQPFEHH 317
>sp|VP6_ROTH6|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 FPSLQPLGHN 10
FP+ QP H+
Sbjct: 308 FPNAQPFEHH 317
>sp|VP6_ROTHD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 FPSLQPLGHN 10
FP+ QP H+
Sbjct: 308 FPNAQPFEHH 317
>sp|VP6_ROT41|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 1 FPSLQPLGHN 10
FP+ QP H+
Sbjct: 308 FPNAQPFEHH 317
>sp|VP6_ROTHS|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 FPSLQPLGHN 10
FP+ QP H+
Sbjct: 308 FPNAQPFEHH 317
>sp|FUS_PIV5|FUSION glycoprotein F0|Parainfluenza virus 5 (strain W3)
Query: 4 LQPLGHN 10
LQP+G N
Sbjct: 80 LQPIGEN 86
>sp|VP6_ROTHW|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 FPSLQPLGHN 10
FP QP H+
Sbjct: 308 FPQAQPFQHH 317
>sp|VP6_ROTYO|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 FPSLQPLGHN 10
FP QP H+
Sbjct: 308 FPQAQPFQHH 317
>sp|VP6_ROTHK|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 FPSLQPLGHN 10
FP QP H+
Sbjct: 308 FPQAQPFQHH 317
>sp|UL126_HCMVA|UNCHARACTERIZED protein UL126|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FPSLQPLGHN 10
FPSL P+ N
Sbjct: 7 FPSLHPIDVN 16
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PSLQPL 7
P+LQPL
Sbjct: 789 PALQPL 794
>sp|VP6_ROTHU|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 1 FPSLQPLGHN 10
FP QP H+
Sbjct: 308 FPQAQPFQHH 317
>sp|VP6_ROTHT|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 FPSLQPLGHN 10
FP QP H+
Sbjct: 308 FPQAQPFQHH 317
>sp|VP6_ROTAD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 FPSLQPLGHN 10
FP QP H+
Sbjct: 308 FPQAQPFQHH 317
>sp|VP6_ROTHP|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 FPSLQPLGHN 10
FP QP H+
Sbjct: 308 FPQAQPFQHH 317
>sp|VME1_CVHNL|MEMBRANE protein|Human coronavirus NL63 (HCoV-NL63)
Query: 3 SLQPLGHN 10
SLQ GHN
Sbjct: 121 SLQVYGHN 128
>sp|VP6_ROTH3|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 FPSLQPLGHN 10
FP+ QP H+
Sbjct: 308 FPNAQPFVHH 317
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 5 QPLGH 9
QP+GH
Sbjct: 55 QPIGH 59
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 2 PSLQPLGH 9
P L P GH
Sbjct: 264 PDLWPQGH 271
>sp|US12_HCMVM|UNCHARACTERIZED protein US12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FPSLQPLGH 9
F +PLGH
Sbjct: 6 FHQGEPLGH 14
>sp|US12_HCMVA|UNCHARACTERIZED protein HVLF6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FPSLQPLGH 9
F +PLGH
Sbjct: 6 FHQGEPLGH 14
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 1 FPSLQPLGHN 10
PSL P G N
Sbjct: 492 LPSLVPGGKN 501
>sp|CEP1_HHV6U|CYTOPLASMIC envelopment protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 FPSLQPL 7
FP+L P+
Sbjct: 145 FPALSPI 151
>sp|NEC1_HHV8P|NUCLEAR egress protein 1|Human herpesvirus 8 type P
Query: 3 SLQPLGHN 10
SL P GH+
Sbjct: 104 SLSPFGHS 111
290|Sequence|1446|1455|PLGHNKSRAS
>sp|US12_HCMVM|UNCHARACTERIZED protein US12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PLGHNKSR 8
PLGH K +
Sbjct: 11 PLGHKKEK 18
>sp|US12_HCMVA|UNCHARACTERIZED protein HVLF6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PLGHNKSR 8
PLGH K +
Sbjct: 11 PLGHKKEK 18
>sp|E320_ADE35|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 35
Query: 1 PLGHN 5
PLGHN
Sbjct: 25 PLGHN 29
>sp|E320_ADE1P|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 11
Query: 1 PLGHN 5
PLGHN
Sbjct: 25 PLGHN 29
>sp|E320_ADE1A|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 11
Query: 1 PLGHN 5
PLGHN
Sbjct: 25 PLGHN 29
>sp|UL24_HHV6Z|PROTEIN UL24 homolog|Human herpesvirus 6B (strain Z29)
Query: 3 GHNKSRAS 10
G N+SRAS
Sbjct: 222 GENRSRAS 229
>sp|UL24_HHV6G|PROTEIN UL24 homolog|Human herpesvirus 6A (strain GS)
Query: 3 GHNKSRAS 10
G N+SRAS
Sbjct: 222 GENRSRAS 229
>sp|UL24_HHV6U|PROTEIN UL24 homolog|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 GHNKSRAS 10
G N+SRAS
Sbjct: 222 GENRSRAS 229
>sp|VIF_HV19N|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 PLGHNK 6
P GHNK
Sbjct: 136 PAGHNK 141
>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18
Query: 1 PLGHNKSR 8
P G+NK R
Sbjct: 272 PTGNNKRR 279
>sp|VIF_HV1OY|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 PLGHNK 6
P GHNK
Sbjct: 136 PAGHNK 141
>sp|VE2_HPV65|REGULATORY protein E2|Human papillomavirus 65
Query: 1 PLGHNKSRAS 10
P G KSR S
Sbjct: 231 PCGRGKSRES 240
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 PLGHNKSRAS 10
PLG NK +S
Sbjct: 152 PLGSNKGGSS 161
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 PLGHNKSRAS 10
PLG NK +S
Sbjct: 155 PLGSNKGGSS 164
>sp|VE8E2_HPV65|PROTEIN E8^E2C|Human papillomavirus 65
Query: 1 PLGHNKSRAS 10
P G KSR S
Sbjct: 39 PCGRGKSRES 48
291|Sequence|1451|1460|KSRASSSLDG
>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)
Query: 1 KSRASSSLD 9
KSR++S+LD
Sbjct: 69 KSRSASALD 77
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 KSRASSSLD 9
KS+AS +LD
Sbjct: 148 KSKASVTLD 156
292|Sequence|1456|1465|SSLDGFKDSF
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 SSLDGFKD 8
SSL+GF D
Sbjct: 1209 SSLNGFTD 1216
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 LDGFKDSF 10
LDG+ +SF
Sbjct: 2490 LDGYSESF 2497
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 3 LDGFKDSF 10
LDG+ +SF
Sbjct: 2463 LDGYSESF 2470
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 3 LDGFKDSF 10
LDG+ +SF
Sbjct: 2468 LDGYSESF 2475
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 SSLDGFKDS 9
SSL+GFK +
Sbjct: 1204 SSLEGFKRT 1212
>sp|UL91_HHV6U|PROTEIN U62|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SSLDGFKDSF 10
S+L+G KD F
Sbjct: 3 SALNGIKDDF 12
>sp|UL10_HCMVM|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 GFKDSF 10
GF DSF
Sbjct: 189 GFADSF 194
>sp|UL10_HCMVA|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 GFKDSF 10
GF DSF
Sbjct: 190 GFADSF 195
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 SSLDGFK 7
SS+D FK
Sbjct: 3810 SSIDAFK 3816
>sp|SCAF_HHV8P|CAPSID scaffolding protein|Human herpesvirus 8 type P
Query: 1 SSLDGFKDS 9
SS+DG K +
Sbjct: 269 SSIDGMKTT 277
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 SSLDGFK 7
SS+D FK
Sbjct: 3810 SSIDAFK 3816
>sp|UL96_HHV6Z|PROTEIN U68|Human herpesvirus 6B (strain Z29)
Query: 1 SSLDGFKD 8
SSL GF D
Sbjct: 58 SSLSGFLD 65
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 5 GFKDSF 10
GF+D+F
Sbjct: 245 GFRDNF 250
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 5 GFKDSF 10
GF+D+F
Sbjct: 321 GFRDNF 326
293|Sequence|1461|1470|FKDSFDLQGQ
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 FKDSFDLQ 8
F +SFDLQ
Sbjct: 1370 FPESFDLQ 1377
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 FKDSFDLQ 8
F +SFDLQ
Sbjct: 1370 FPESFDLQ 1377
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 FKDSFDLQ 8
F +SFDLQ
Sbjct: 1370 FPESFDLQ 1377
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 KDSFDLQGQ 10
+D F LQG+
Sbjct: 756 QDEFQLQGK 764
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 FKDSFDLQ 8
+ +SFDLQ
Sbjct: 1370 YPESFDLQ 1377
>sp|FUS_PI1HC|FUSION glycoprotein F0|Human parainfluenza 1 virus (strain
Query: 1 FKDSFDLQ 8
KD+ DLQ
Sbjct: 85 LKDALDLQ 92
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 KDSFDLQG 9
+D F LQG
Sbjct: 755 QDEFQLQG 762
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 3 DSFDLQG 9
D+FDL+G
Sbjct: 7 DNFDLEG 13
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 FKDSFDLQ 8
FKD+ DL+
Sbjct: 772 FKDALDLK 779
294|Sequence|1466|1475|DLQGQSTLKI
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 2 LQGQSTLKI 10
++GQ+T+K+
Sbjct: 1024 IRGQNTVKV 1032
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 3 QGQSTLKI 10
+GQ+T+KI
Sbjct: 1023 RGQNTVKI 1030
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 3 QGQSTLKI 10
+GQ+T+KI
Sbjct: 1023 RGQNTVKI 1030
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 3 QGQSTLKI 10
+GQ+T+KI
Sbjct: 1023 RGQNTVKI 1030
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 3 QGQSTLKI 10
+GQ+T+K+
Sbjct: 1025 RGQNTVKV 1032
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 3 QGQSTLKI 10
+GQ+T+K+
Sbjct: 1025 RGQNTVKV 1032
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 3 QGQSTLKI 10
+GQ+T+K+
Sbjct: 1024 RGQNTVKV 1031
295|Sequence|1471|1480|STLKISNPKG
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 2 TLKISNP 8
TL+I+NP
Sbjct: 21 TLRITNP 27
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 TLKISNP 8
TL+I+NP
Sbjct: 21 TLRITNP 27
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 TLKISNPK 9
T+KI+ PK
Sbjct: 2048 TMKITGPK 2055
>sp|3BHS_VACCC|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 2 TLKISN 7
TLKISN
Sbjct: 304 TLKISN 309
>sp|3BHS_VACCA|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 2 TLKISN 7
TLKISN
Sbjct: 304 TLKISN 309
>sp|3BHS_MONPV|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Monkeypox
Query: 2 TLKISN 7
TLKISN
Sbjct: 304 TLKISN 309
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 TLKISNPK 9
T+KI+ PK
Sbjct: 2047 TMKITGPK 2054
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 TLKISNPK 9
T+KI+ PK
Sbjct: 2047 TMKITGPK 2054
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 TLKISNPK 9
T+KI+ PK
Sbjct: 2047 TMKITGPK 2054
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 TLKISNPK 9
T+KIS P+
Sbjct: 2044 TMKISGPR 2051
>sp|PHOSP_VSIVA|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 2 TLKISNPKG 10
TL++++P+G
Sbjct: 121 TLRLTSPEG 129
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 3 LKISNPK 9
LKIS PK
Sbjct: 326 LKISQPK 332
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 3 LKISNPK 9
LKIS PK
Sbjct: 326 LKISQPK 332
>sp|3BHS_VAR67|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Variola
Query: 2 TLKISN 7
TLKISN
Sbjct: 186 TLKISN 191
296|Sequence|1476|1485|SNPKGWVTFE
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 NPKGW 6
NPKGW
Sbjct: 122 NPKGW 126
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 NPKGW 6
NPKGW
Sbjct: 122 NPKGW 126
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 2 NPKGWVTFE 10
NP+GW +
Sbjct: 407 NPEGWCCLQ 415
>sp|PG204_MONPV|SOLUBLE interferon alpha/beta receptor OPG204|Monkeypox virus (MPXV)
Query: 2 NPKGWV 7
NP GW+
Sbjct: 290 NPSGWI 295
>sp|UL16P_HCMVM|PROTEIN UL16|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PKGWVTF 9
P GWV F
Sbjct: 9 PLGWVFF 15
>sp|UL16P_HCMVA|PROTEIN UL16|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PKGWVTF 9
P GWV F
Sbjct: 9 PLGWVFF 15
>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus
Query: 2 NPKGWV 7
NP GW+
Sbjct: 293 NPSGWL 298
>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate
Query: 2 NPKGWV 7
NP GW+
Sbjct: 293 NPSGWL 298
>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain Dairen
Query: 2 NPKGWV 7
NP GW+
Sbjct: 290 NPSGWL 295
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 NPKGWVT 8
+PK WV+
Sbjct: 1893 DPKNWVS 1899
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 NPKGWVT 8
+PK WV+
Sbjct: 1806 DPKNWVS 1812
>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 2 NPKGWV 7
NP GW+
Sbjct: 292 NPSGWL 297
>sp|NSS_UUKS|NON-STRUCTURAL protein NS-S|Uukuniemi virus (strain S23) (UUKV)
Query: 6 WVTFE 10
W+TFE
Sbjct: 248 WITFE 252
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 5 GWVTF 9
GW+TF
Sbjct: 1054 GWLTF 1058
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 5 GWVTF 9
GW+TF
Sbjct: 1054 GWLTF 1058
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 5 GWVTF 9
GW+TF
Sbjct: 1054 GWLTF 1058
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 NPKGW 6
NP GW
Sbjct: 668 NPHGW 672
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 NPKGW 6
NP GW
Sbjct: 668 NPHGW 672
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 NPKGW 6
NP GW
Sbjct: 667 NPHGW 671
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 NPKGW 6
NP GW
Sbjct: 668 NPHGW 672
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 NPKGW 6
NP GW
Sbjct: 666 NPHGW 670
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 SNPKGWVTFE 10
S+P +VTFE
Sbjct: 759 SSPYRFVTFE 768
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 SNPKGWVTFE 10
S+P +VTFE
Sbjct: 759 SSPYRFVTFE 768
>sp|NSP1_ROTHC|NON-STRUCTURAL protein 1|Rotavirus C (isolate RVC/Human/United
Query: 2 NPKGWVTFE 10
N W+TF+
Sbjct: 78 NSHRWITFD 86
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 4 KGWVTF 9
+ WVTF
Sbjct: 158 RAWVTF 163
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 3 PKGWV 7
P+GWV
Sbjct: 8 PRGWV 12
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 3 PKGWV 7
P GWV
Sbjct: 585 PAGWV 589
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 4 KGWVTF 9
+ WVTF
Sbjct: 158 RAWVTF 163
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 4 KGWVTF 9
+ WVTF
Sbjct: 158 RAWVTF 163
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 4 KGWVTF 9
+ WVTF
Sbjct: 158 RAWVTF 163
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 2 NPKGWVT 8
NP W+T
Sbjct: 619 NPLMWIT 625
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 2 NPKGWVT 8
NP W+T
Sbjct: 619 NPLMWIT 625
>sp|VL2_HPV26|MINOR capsid protein L2|Human papillomavirus type 26
Query: 2 NPKGWVTFE 10
NP +VTF+
Sbjct: 245 NPSTFVTFD 253
>sp|PG072_VACCC|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Vaccinia virus (strain
Query: 2 NPKGW 6
NPK W
Sbjct: 2 NPKHW 6
>sp|PG072_MONPV|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Monkeypox virus (MPXV)
Query: 2 NPKGW 6
NPK W
Sbjct: 2 NPKHW 6
>sp|PG072_VARV|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Variola virus
Query: 2 NPKGW 6
NPK W
Sbjct: 2 NPKHW 6
>sp|PG072_VAR67|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Variola virus (isolate
Query: 2 NPKGW 6
NPK W
Sbjct: 2 NPKHW 6
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 3 PKGWV 7
P+GWV
Sbjct: 603 PEGWV 607
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 NPKGW 6
NPK W
Sbjct: 726 NPKEW 730
297|Sequence|1481|1490|WVTFEEEEDF
>sp|NSP1_ROTHC|NON-STRUCTURAL protein 1|Rotavirus C (isolate RVC/Human/United
Query: 1 WVTFEEE 7
W+TF+EE
Sbjct: 82 WITFDEE 88
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 WVTFEEEED 9
W T EE+D
Sbjct: 2416 WSTVSEEDD 2424
>sp|VE4_HPV58|PROTEIN E4|Human papillomavirus 58
Query: 1 WVTFEEEEDF 10
W EEED+
Sbjct: 56 WTVDHEEEDY 65
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 WVTFEEEED 9
W T EE+D
Sbjct: 2429 WSTCSEEDD 2437
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 WVTFEEEED 9
W T EE+D
Sbjct: 2429 WSTCSEEDD 2437
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 WVTFEEEEDF 10
WV EE+ F
Sbjct: 152 WVKLVEEKKF 161
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 WVTFEEEEDF 10
WV EE+ F
Sbjct: 152 WVKLVEEKKF 161
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 WVTFEEEEDF 10
WV EE+ F
Sbjct: 152 WVKLVEEKKF 161
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 WVTFEEEEDF 10
WV EE+ F
Sbjct: 157 WVKLVEEKKF 166
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 WVTFEEEEDF 10
WV EE+ F
Sbjct: 157 WVKLVEEKKF 166
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 WVTFEEEEDF 10
WV EE+ F
Sbjct: 157 WVKLVEEKKF 166
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 WVTFEEEEDF 10
WV EE+ F
Sbjct: 157 WVKLVEEKKF 166
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 WVTFEEEEDF 10
WV EE+ F
Sbjct: 157 WVKLVEEKKF 166
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 5 EEEEDF 10
EE+EDF
Sbjct: 546 EEKEDF 551
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 5 EEEEDF 10
EE+EDF
Sbjct: 546 EEKEDF 551
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 WVTFEE 6
WVTF E
Sbjct: 1423 WVTFRE 1428
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 WVTFEEEEDF 10
WV EE+ F
Sbjct: 157 WVKLVEEKKF 166
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 1 WVTFEE 6
WVTF E
Sbjct: 1423 WVTFRE 1428
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 WVTFEE 6
WVTF E
Sbjct: 1424 WVTFRE 1429
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 WVTFEE 6
WVTF E
Sbjct: 1423 WVTFRE 1428
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 WVTFEE 6
WVTF E
Sbjct: 1423 WVTFRE 1428
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 WVTFEE 6
WVTF E
Sbjct: 1423 WVTFRE 1428
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 WVTFEE 6
WVTF E
Sbjct: 1423 WVTFRE 1428
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 3 TFEEEEDF 10
+ EEE+DF
Sbjct: 141 SVEEEDDF 148
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 3 TFEEEEDF 10
+ EEE+DF
Sbjct: 141 SVEEEDDF 148
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 WVTFEE 6
WVTF E
Sbjct: 1424 WVTFRE 1429
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 WVTFEEEED 9
W+ EEE +
Sbjct: 1044 WLELEEENE 1052
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 WVTFEE 6
WVTF E
Sbjct: 1424 WVTFRE 1429
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 WVTFEEEED 9
W T ++ED
Sbjct: 2429 WSTVSDQED 2437
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 WVTFEEEED 9
W T ++ED
Sbjct: 2429 WSTVSDQED 2437
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 WVTFEEEEDF 10
WV EE+ F
Sbjct: 157 WVKLVEEKKF 166
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 WVTFEEEEDF 10
WV EE+ F
Sbjct: 155 WVKLVEEKKF 164
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 TFEEEEDF 10
T+E EED
Sbjct: 1005 TWEREEDL 1012
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 WVTFEEEED 9
W T +E+D
Sbjct: 2415 WSTVSDEDD 2423
>sp|ORF3_TTVG1|UNCHARACTERIZED ORF3 protein|Torque teno midi virus 1
Query: 5 EEEEDF 10
EE+EDF
Sbjct: 99 EEKEDF 104
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WVTFEEEEDF 10
W+ E+ED
Sbjct: 943 WLKLREKEDL 952
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 WVTFEEEEDF 10
WV EE+ F
Sbjct: 157 WVKLVEEKKF 166
>sp|NSS_UUKS|NON-STRUCTURAL protein NS-S|Uukuniemi virus (strain S23) (UUKV)
Query: 1 WVTFEEEED 9
W+TFE +
Sbjct: 248 WITFESARE 256
>sp|UL19_HCMVA|UNCHARACTERIZED protein UL19|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 WVTFEEEED 9
WV E+E D
Sbjct: 84 WVASEDELD 92
>sp|UL19_HCMVM|UNCHARACTERIZED protein UL19|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 WVTFEEEED 9
WV E+E D
Sbjct: 84 WVASEDELD 92
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 WVTFEEEEDF 10
WV EE+ F
Sbjct: 157 WVKLVEEKKF 166
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 WVTFEEEEDF 10
WV EE+ F
Sbjct: 157 WVKLVEEKKF 166
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 WVTFEEEEDF 10
WV EE+ F
Sbjct: 152 WVKLVEEKKF 161
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 WVTFEEEEDF 10
WV EE+ F
Sbjct: 157 WVKLVEEKKF 166
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 WVTFEEEEDF 10
WV EE+ F
Sbjct: 157 WVKLVEEKKF 166
>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21
Query: 1 WVTFEEEEDF 10
+ +FE+ +DF
Sbjct: 474 FFSFEQRKDF 483
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 WVTFEEEEDF 10
WV EE+ F
Sbjct: 157 WVKLVEEKKF 166
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 WVTFEEEEDF 10
WV EE+ F
Sbjct: 155 WVKLVEEKKF 164
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 WVTFEEEEDF 10
WV EE+ F
Sbjct: 157 WVKLVEEKKF 166
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 5 EEEEDF 10
EEE DF
Sbjct: 14 EEESDF 19
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 WVTFEEEEDF 10
WV EE+ F
Sbjct: 152 WVKLVEEKKF 161
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 WVTFEEEE 8
WV EE+E
Sbjct: 1227 WVVQEEKE 1234
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 1 WVTFEEEE 8
WV EE+E
Sbjct: 1227 WVVQEEKE 1234
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 WVTFEEEEDF 10
WV EE+ F
Sbjct: 152 WVKLVEEKKF 161
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 2 VTFEEEEDF 10
++F E EDF
Sbjct: 121 LSFNEAEDF 129
298|Sequence|1486|1495|EEEDFGVKGK
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 EEEDFG 6
EE+DFG
Sbjct: 144 EEDDFG 149
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 EEEDFG 6
EE+DFG
Sbjct: 144 EEDDFG 149
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 1 EEEDFGVKGK 10
+EED+G G+
Sbjct: 621 DEEDYGETGQ 630
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 EEEDFGVK 8
E+EDF ++
Sbjct: 523 EQEDFSIE 530
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 EEEDFGVK 8
E+EDF ++
Sbjct: 523 EQEDFSIE 530
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 EEEDFGVK 8
E+EDF ++
Sbjct: 522 EQEDFSIE 529
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 EEEDFGVK 8
E+EDF ++
Sbjct: 522 EQEDFSIE 529
>sp|CAPSD_HPBVH|CAPSID protein precursor|Human picobirnavirus (strain
Query: 2 EEDFGV 7
+EDFG+
Sbjct: 295 DEDFGI 300
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 FGVKGK 10
FG++GK
Sbjct: 670 FGIRGK 675
>sp|PG195_MONPV|PROTEIN OPG195|Monkeypox virus (MPXV)
Query: 1 EEEDFGVK 8
EEE +G+K
Sbjct: 26 EEETWGLK 33
>sp|PG195_VACCC|PROTEIN OPG195|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 EEEDFGVK 8
EEE +G+K
Sbjct: 26 EEETWGLK 33
299|Sequence|1491|1500|GVKGKSKSAC
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 2 VKGKSKS 8
+KGK+KS
Sbjct: 297 LKGKTKS 303
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 1 GVKGKSKSAC 10
G+ G ++ AC
Sbjct: 121 GLSGLAREAC 130
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 GVKGKSKSAC 10
G+ G ++ AC
Sbjct: 121 GLSGLAREAC 130
>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GVKGKSKSAC 10
GV G S AC
Sbjct: 206 GVFGASLDAC 215
300|Sequence|1496|1505|SKSACSDLLG
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 1 SKSACSDLLG 10
S S+CSD+ G
Sbjct: 357 SMSSCSDVYG 366
>sp|VP1_POVWU|MAJOR capsid protein VP1|WU polyomavirus (WUPyV)
Query: 5 CSDLLG 10
C+DLLG
Sbjct: 266 CADLLG 271
>sp|TEG3_VZVO|TEGUMENT protein UL14 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 SKSACSDL 8
+K AC+DL
Sbjct: 54 AKEACADL 61
>sp|TEG3_VZVD|TEGUMENT protein UL14 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 SKSACSDL 8
+K AC+DL
Sbjct: 54 AKEACADL 61
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 3 SACSDLL 9
SAC DLL
Sbjct: 332 SACPDLL 338
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 3 SACSDLL 9
SAC DLL
Sbjct: 332 SACPDLL 338
>sp|VP1_POVKI|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 350)
Query: 5 CSDLLG 10
C+D+LG
Sbjct: 274 CADMLG 279
>sp|VP1_POVK6|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 60)
Query: 5 CSDLLG 10
C+D+LG
Sbjct: 274 CADMLG 279
>sp|VP1_POVK3|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 380)
Query: 5 CSDLLG 10
C+D+LG
Sbjct: 274 CADMLG 279
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 SACSDLL 9
S C DLL
Sbjct: 763 SVCKDLL 769
>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 SACSDL 8
SACSD+
Sbjct: 52 SACSDM 57
301|Sequence|1501|1510|SDLLGNQPSS
>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 LLGNQPSS 10
L GN PSS
Sbjct: 493 LFGNDPSS 500
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 LLGNQPSS 10
L GN PSS
Sbjct: 492 LFGNDPSS 499
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 LLGNQPSS 10
L GN PSS
Sbjct: 496 LFGNDPSS 503
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 LLGNQPSS 10
L GN PSS
Sbjct: 492 LFGNDPSS 499
>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 LLGNQPSS 10
L GN PSS
Sbjct: 492 LFGNDPSS 499
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 SDLLGNQPSS 10
+ L G+QP S
Sbjct: 2280 AKLFGSQPGS 2289
>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 LLGNQPSS 10
L GN PSS
Sbjct: 489 LFGNDPSS 496
>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 LLGNQPSS 10
L GN PSS
Sbjct: 494 LFGNDPSS 501
>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 LLGNQPSS 10
L GN PSS
Sbjct: 504 LFGNDPSS 511
>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 LLGNQPSS 10
L GN PSS
Sbjct: 491 LFGNDPSS 498
>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 LLGNQPSS 10
L GN PSS
Sbjct: 504 LFGNDPSS 511
>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 LLGNQPSS 10
L GN PSS
Sbjct: 504 LFGNDPSS 511
>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 LLGNQPSS 10
L GN PSS
Sbjct: 504 LFGNDPSS 511
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 3 LLGNQP 8
L+GNQP
Sbjct: 1756 LIGNQP 1761
>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 LLGNQPSS 10
L GN PSS
Sbjct: 492 LFGNDPSS 499
>sp|GAG_HV1J3|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 LLGNQPSS 10
L GN PSS
Sbjct: 492 LFGNDPSS 499
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 DLLGNQP 8
DL+ NQP
Sbjct: 1913 DLVPNQP 1919
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 DLLGNQP 8
DL+ NQP
Sbjct: 1913 DLVPNQP 1919
>sp|VE7_HPV60|PROTEIN E7|Human papillomavirus type 60
Query: 3 LLGNQPS 9
++GNQP+
Sbjct: 1 MIGNQPN 7
>sp|VP6_ROTJ1|INTERMEDIATE capsid protein VP6|Rotavirus X (strain
Query: 4 LGNQP 8
LGNQP
Sbjct: 231 LGNQP 235
>sp|VP6_ROTB2|INTERMEDIATE capsid protein VP6|Rotavirus X (isolate
Query: 4 LGNQP 8
LGNQP
Sbjct: 231 LGNQP 235
302|Sequence|1506|1515|NQPSSFSGSN
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 NQPSSFSG 8
+QP FSG
Sbjct: 438 SQPVEFSG 445
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 3 PSSFSGS 9
PSSF G+
Sbjct: 1374 PSSFKGA 1380
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 3 PSSFSGS 9
PSSF G+
Sbjct: 1374 PSSFKGA 1380
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PSSFSGSN 10
PSSF+ +N
Sbjct: 389 PSSFTSTN 396
303|Sequence|1511|1520|FSGSNLTLND
>sp|UL11P_HCMVA|PROTEIN UL11|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GSNLTLN 9
G+N+TLN
Sbjct: 40 GTNVTLN 46
>sp|UL11P_HCMVM|PROTEIN UL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GSNLTLN 9
G+N+TLN
Sbjct: 40 GTNVTLN 46
>sp|UL08_HCMVA|MEMBRANE protein UL8|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 NLTLND 10
NLTLND
Sbjct: 105 NLTLND 110
>sp|UL07_HCMVA|CEACAM1-LIKE protein UL7|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 NLTLND 10
NLTLND
Sbjct: 105 NLTLND 110
>sp|UL07_HCMVM|CEACAM1-LIKE protein UL7|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 NLTLND 10
NLTLND
Sbjct: 105 NLTLND 110
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 4 SNLTLND 10
+N+T+ND
Sbjct: 211 ANITIND 217
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 4 SNLTLND 10
+N+T+ND
Sbjct: 211 ANITIND 217
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 FSGSNLTLND 10
FSG+ LND
Sbjct: 3184 FSGALYFLND 3193
304|Sequence|1516|1525|LTLNDDWNKG
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 4 NDDWN 8
NDDWN
Sbjct: 1407 NDDWN 1411
>sp|VE2_HPV15|REGULATORY protein E2|Human papillomavirus 15
Query: 2 TLNDDWNK 9
TL+D WNK
Sbjct: 67 TLDDTWNK 74
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 4 NDDWN 8
NDDWN
Sbjct: 1408 NDDWN 1412
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 1 LTLNDDWNKG 10
LT ND W +G
Sbjct: 358 LTCNDSWYRG 367
>sp|VE2_HPV09|REGULATORY protein E2|Human papillomavirus 9
Query: 2 TLNDDWNK 9
T+ND W K
Sbjct: 141 TVNDTWEK 148
>sp|PG068_VARV|PROTEIN OPG068|Variola virus
Query: 4 NDDWNK 9
NDDW K
Sbjct: 312 NDDWKK 317
>sp|PG068_VAR67|PROTEIN OPG068|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 NDDWNK 9
NDDW K
Sbjct: 312 NDDWKK 317
>sp|PG068_VACCC|PROTEIN OPG068|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 NDDWNK 9
NDDW K
Sbjct: 312 NDDWKK 317
>sp|PG068_MONPV|PROTEIN OPG068|Monkeypox virus (MPXV)
Query: 4 NDDWNK 9
NDDW K
Sbjct: 312 NDDWKK 317
>sp|VE2_HPV17|REGULATORY protein E2|Human papillomavirus 17
Query: 3 LNDDWNK 9
L+D WNK
Sbjct: 142 LDDTWNK 148
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 3 LNDDW 7
L+DDW
Sbjct: 1419 LDDDW 1423
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 1 LTLNDDWNK 9
+TLN W+K
Sbjct: 204 VTLNQSWSK 212
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 1 LTLNDDWNK 9
+TLN W+K
Sbjct: 204 VTLNQSWSK 212
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 4 NDDWN 8
N DWN
Sbjct: 510 NQDWN 514
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 LNDDWNKG 10
+ DD NKG
Sbjct: 1602 IEDDKNKG 1609
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 TLNDDW 7
T N DW
Sbjct: 69 TFNPDW 74
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 TLNDDW 7
T N DW
Sbjct: 69 TFNPDW 74
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 4 NDDWNKG 10
ND W +G
Sbjct: 361 NDSWYRG 367
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 4 NDDWNKG 10
ND W +G
Sbjct: 361 NDSWYRG 367
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 4 NDDWNKG 10
ND W +G
Sbjct: 361 NDSWYRG 367
305|Sequence|1521|1530|DWNKGTNVSF
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 1 DWNKGTNV 8
DW++GT+V
Sbjct: 374 DWHQGTHV 381
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 1 DWNKGTNV 8
DW++GT+V
Sbjct: 374 DWHQGTHV 381
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 1 DWNKGTNV 8
DW++GT+V
Sbjct: 374 DWHQGTHV 381
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 1 DWNKGTNV 8
DW++GT+V
Sbjct: 374 DWHQGTHV 381
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 1 DWNKGTNV 8
DW++GT+V
Sbjct: 374 DWHQGTHV 381
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 DWNKGTNV 8
DW++GT+V
Sbjct: 374 DWHQGTHV 381
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 1 DWNKGTNV 8
DW++GT+V
Sbjct: 374 DWHQGTHV 381
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 1 DWNKGTNV 8
DW++GT+V
Sbjct: 374 DWHQGTHV 381
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 1 DWNKGTNV 8
DW++GT++
Sbjct: 374 DWHQGTHI 381
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 WNKGTNVS 9
W GTN+S
Sbjct: 733 WQSGTNMS 740
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 WNKGTNVS 9
W GTN+S
Sbjct: 733 WQSGTNMS 740
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 WNKGTNVS 9
W GTN S
Sbjct: 739 WQSGTNAS 746
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 WNKGTNVS 9
W GTN S
Sbjct: 728 WQSGTNAS 735
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 WNKGTNVS 9
W GTN S
Sbjct: 728 WQSGTNAS 735
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DWNKGTN 7
DW +G N
Sbjct: 184 DWRRGRN 190
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DWNKGTN 7
DW +G N
Sbjct: 253 DWRRGRN 259
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 2 WNKGTNVS 9
W+KGT S
Sbjct: 183 WSKGTTCS 190
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 418 WTSGSSISF 426
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 418 WTSGSSISF 426
>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 417 WTSGSSISF 425
>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 438 WTSGSSISF 446
>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 438 WTSGSSISF 446
>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 438 WTSGSSISF 446
>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 437 WTSGSSISF 445
>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 409 WTSGSSISF 417
>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 437 WTSGSSISF 445
>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 438 WTSGSSISF 446
>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 437 WTSGSSISF 445
>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 417 WTSGSSISF 425
>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 417 WTSGSSISF 425
>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 417 WTSGSSISF 425
>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 438 WTSGSSISF 446
>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 437 WTSGSSISF 445
>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 437 WTSGSSISF 445
>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 438 WTSGSSISF 446
>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 417 WTSGSSISF 425
>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 417 WTSGSSISF 425
>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 438 WTSGSSISF 446
>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 437 WTSGSSISF 445
>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 437 WTSGSSISF 445
>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 417 WTSGSSISF 425
>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 438 WTSGSSISF 446
>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 437 WTSGSSISF 445
>sp|NRAM_I67A2|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 437 WTSGSSISF 445
>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 437 WTSGSSISF 445
>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 417 WTSGSSISF 425
>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 437 WTSGSSISF 445
>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 437 WTSGSSISF 445
>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 438 WTSGSSISF 446
>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 437 WTSGSSISF 445
>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 437 WTSGSSISF 445
>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 422 WTSGSSISF 430
>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 437 WTSGSSISF 445
>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 437 WTSGSSISF 445
>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 438 WTSGSSISF 446
>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 438 WTSGSSISF 446
>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 437 WTSGSSISF 445
>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 438 WTSGSSISF 446
>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New
Query: 2 WNKGTNVSF 10
W G+++SF
Sbjct: 438 WTSGSSISF 446
>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40
Query: 1 DWNKGTN 7
D+N+G N
Sbjct: 279 DYNRGEN 285
>sp|NSP5_ROTWI|NON-STRUCTURAL protein 5|Rotavirus A (isolate RVA/Human/United
Query: 3 NKGTNVS 9
NKG NVS
Sbjct: 113 NKGINVS 119
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 2 WNKGTNVS 9
W KGT S
Sbjct: 166 WGKGTQCS 173
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 WNKGTN 7
WN TN
Sbjct: 557 WNDNTN 562
>sp|NSP5_ROTHK|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 3 NKGTNVS 9
NKG NVS
Sbjct: 113 NKGINVS 119
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 WNKGTNV 8
W K TNV
Sbjct: 1181 WEKVTNV 1187
>sp|NEF_HV19N|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 NKGTNVSF 10
NKG N+S
Sbjct: 158 NKGENISL 165
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 WNKGTNV 8
W K TNV
Sbjct: 1180 WEKVTNV 1186
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 WNKGTNV 8
W K TNV
Sbjct: 1180 WEKVTNV 1186
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 WNKGTNV 8
W K TNV
Sbjct: 1180 WEKVTNV 1186
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 WNKGTNV 8
W K TNV
Sbjct: 1180 WEKVTNV 1186
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 WNKGTNV 8
W K TNV
Sbjct: 1180 WEKVTNV 1186
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 WNKGTNV 8
W K TNV
Sbjct: 1180 WEKVTNV 1186
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 WNKGTNV 8
W K TNV
Sbjct: 1180 WEKVTNV 1186
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 2 WNKGTNV 8
W K TNV
Sbjct: 1181 WEKVTNV 1187
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 WNKGTNV 8
W K TNV
Sbjct: 1180 WEKVTNV 1186
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 2 WNKGT 6
W+KGT
Sbjct: 276 WSKGT 280
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 WNKGTNV 8
W K TNV
Sbjct: 1180 WEKVTNV 1186
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 2 WNKGTNV 8
W K TNV
Sbjct: 1180 WEKVTNV 1186
306|Sequence|1526|1535|TNVSFCVLPS
>sp|PP85_HHV6Z|PHOSPHOPROTEIN 85|Human herpesvirus 6B (strain Z29)
Query: 1 TNVSFCVLPS 10
T + C+LPS
Sbjct: 328 TKANICILPS 337
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 NVSFCVLPS 10
+V C+LPS
Sbjct: 507 SVLLCILPS 515
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 2 NVSFCVLPS 10
+V C+LPS
Sbjct: 507 SVLLCILPS 515
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 5 FCVLPS 10
FCVLP+
Sbjct: 783 FCVLPA 788
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 FCVLPS 10
FCVLP+
Sbjct: 783 FCVLPA 788
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 TNVSFCVLPS 10
T + C+LP+
Sbjct: 328 TKANICILPT 337
>sp|TRX1_HHV7J|TRIPLEX capsid protein 1|Human herpesvirus 7 (strain JI)
Query: 2 NVSFCVLPS 10
NVSFC S
Sbjct: 89 NVSFCTRTS 97
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 2 NVSFCV 7
NVSFC+
Sbjct: 41 NVSFCL 46
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 TNVSFCVLPS 10
+NVSF LP+
Sbjct: 697 SNVSFSGLPN 706
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 NVSFCV 7
NVSFC+
Sbjct: 41 NVSFCL 46
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 TNVSFCVLP 9
T S+C++P
Sbjct: 2020 TVASYCIIP 2028
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 TNVSFCVLP 9
T S+C++P
Sbjct: 2026 TVASYCIIP 2034
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 TNVSFCVLP 9
T S+C++P
Sbjct: 2012 TVASYCIIP 2020
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 TNVSFCVLP 9
T S+C++P
Sbjct: 2020 TVASYCIIP 2028
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 1 TNVSFCVL 8
+++SFCV+
Sbjct: 185 SHISFCVV 192
>sp|VP7_ROTGI|OUTER capsid glycoprotein VP7|Rotavirus B (isolate RVB/Rat/United
Query: 2 NVSFCVL 8
N+SFC L
Sbjct: 129 NLSFCPL 135
307|Sequence|1531|1540|CVLPSRRPPP
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 1 CVLPSRRP 8
CVLP R+P
Sbjct: 118 CVLPKRKP 125
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 LPSRRPPP 10
LP RPPP
Sbjct: 200 LPGIRPPP 207
>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 3 LPSRRPPP 10
LP R PPP
Sbjct: 9 LPKRDPPP 16
>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 3 LPSRRPPP 10
LP R PPP
Sbjct: 9 LPKRDPPP 16
>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)
Query: 3 LPSRRPPP 10
LP R PPP
Sbjct: 9 LPKRDPPP 16
>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 LPSRRPPP 10
LP R PPP
Sbjct: 9 LPKRDPPP 16
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 PSRRPPP 10
P+R PPP
Sbjct: 603 PARDPPP 609
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 PSRRPPP 10
P+R PPP
Sbjct: 603 PARDPPP 609
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 PSRRPPP 10
P+R PPP
Sbjct: 603 PARDPPP 609
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 4 PSRRPPP 10
PS PPP
Sbjct: 497 PSEEPPP 503
>sp|VIF_HV1S2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 VLPSRRPPP 10
+ P RR PP
Sbjct: 154 IRPKRRKPP 162
>sp|VIF_HV1S9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 VLPSRRPPP 10
+ P RR PP
Sbjct: 154 IKPKRRKPP 162
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VLPSRRPPP 10
+LP+ R PP
Sbjct: 722 LLPTPRGPP 730
>sp|E321_ADE1A|EARLY E3 20.2 kDa glycoprotein|Human adenovirus B serotype 11
Query: 2 VLPSRRPPP 10
VLPS P P
Sbjct: 97 VLPSTTPAP 105
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 PSRRPPP 10
PS+ PPP
Sbjct: 228 PSKIPPP 234
>sp|E321_ADE1P|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 11
Query: 2 VLPSRRPPP 10
VLPS P P
Sbjct: 97 VLPSTTPAP 105
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 CVLPSR 6
C+LPS+
Sbjct: 511 CILPSK 516
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 1 CVLPSR 6
C+LPS+
Sbjct: 511 CILPSK 516
>sp|VIF_HV1U4|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 VLPSRRPPP 10
V P+R PP
Sbjct: 154 VTPTRAKPP 162
>sp|VIF_HV19N|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 VLPSRRPPP 10
V P+R+ PP
Sbjct: 154 VTPTRKRPP 162
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 4 PSRRPPP 10
PSR P P
Sbjct: 498 PSRDPTP 504
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 3 LPSRRPPP 10
LP R PPP
Sbjct: 9 LPKRDPPP 16
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 3 LPSRRPPP 10
LP R PPP
Sbjct: 9 LPKRDPPP 16
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 VLPSRRP 8
V+P++RP
Sbjct: 62 VIPTKRP 68
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 PSRRPPP 10
PSR P P
Sbjct: 354 PSRTPSP 360
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 VLPSRRP 8
V+P++RP
Sbjct: 62 VIPTKRP 68
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 CVLPSRR 7
CV+PS +
Sbjct: 1540 CVVPSEK 1546
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 CVLPSRR 7
CV+PS +
Sbjct: 1540 CVVPSEK 1546
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 PSRRPPP 10
PSR P P
Sbjct: 354 PSRTPSP 360
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 PSRRPPP 10
PSR P P
Sbjct: 354 PSRTPSP 360
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 5 SRRPP 9
SRRPP
Sbjct: 921 SRRPP 925
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 4 PSRRPPP 10
P RRP P
Sbjct: 275 PDRRPLP 281
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 5 SRRPP 9
SRRPP
Sbjct: 921 SRRPP 925
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 5 SRRPP 9
SRRPP
Sbjct: 921 SRRPP 925
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 CVLPS 5
C+LPS
Sbjct: 2896 CILPS 2900
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 CVLPS 5
C+LPS
Sbjct: 2896 CILPS 2900
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 5 SRRPP 9
SRRPP
Sbjct: 921 SRRPP 925
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 5 SRRPP 9
SRRPP
Sbjct: 921 SRRPP 925
>sp|MIR2_HHV8P|E3 ubiquitin-protein ligase MIR2|Human herpesvirus 8 type P
Query: 2 VLPSRRP 8
VLP RRP
Sbjct: 165 VLPYRRP 171
308|Sequence|1536|1545|RRPPPPPVPL
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 RRPPPPP 7
+ PPPPP
Sbjct: 2862 KAPPPPP 2868
>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 1 RRPPPPPVP 9
+R PPP VP
Sbjct: 11 KRDPPPGVP 19
>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 1 RRPPPPPVP 9
+R PPP VP
Sbjct: 11 KRDPPPGVP 19
>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)
Query: 1 RRPPPPPVP 9
+R PPP VP
Sbjct: 11 KRDPPPGVP 19
>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RRPPPPPVP 9
+R PPP VP
Sbjct: 11 KRDPPPGVP 19
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 1 RRPPPPPVP 9
+R PPP VP
Sbjct: 11 KRDPPPGVP 19
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 1 RRPPPPPVP 9
+R PPP VP
Sbjct: 11 KRDPPPGVP 19
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 2 RPPPPPVP 9
RPPP P P
Sbjct: 49 RPPPVPSP 56
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 2 RPPPPPVP 9
RPPP P P
Sbjct: 49 RPPPVPSP 56
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PPPPPV 8
P PPPV
Sbjct: 1483 PSPPPV 1488
>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)
Query: 4 PPPPVP 9
P PP+P
Sbjct: 28 PQPPIP 33
>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 PPPPVP 9
P PP+P
Sbjct: 28 PQPPIP 33
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PPPPPV 8
P PPPV
Sbjct: 1483 PSPPPV 1488
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PPPPPV 8
P PPPV
Sbjct: 1483 PSPPPV 1488
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PPPPPV 8
P PPPV
Sbjct: 1483 PSPPPV 1488
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 RPPPPP 7
RPP PP
Sbjct: 182 RPPTPP 187
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PPPPVP 9
PPPP P
Sbjct: 14 PPPPRP 19
Query: 3 PPPP 6
PPPP
Sbjct: 14 PPPP 17
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PPPPVP 9
PPPP P
Sbjct: 14 PPPPRP 19
Query: 3 PPPP 6
PPPP
Sbjct: 14 PPPP 17
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 3 PPPPP 7
PPPPP
Sbjct: 69 PPPPP 73
Query: 1 RRPPPPP 7
++ PPPP
Sbjct: 66 KKIPPPP 72
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PPPPPV 8
P PPPV
Sbjct: 1073 PSPPPV 1078
>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 RPPPPPVP 9
R P PPVP
Sbjct: 157 RRPKPPVP 164
Query: 1 RRPPPP 6
RRP PP
Sbjct: 157 RRPKPP 162
>sp|VP30_MABVR|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 RPPPPP 7
+PPPPP
Sbjct: 69 KPPPPP 74
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 4 PPPPV 8
PPPPV
Sbjct: 1462 PPPPV 1466
Query: 3 PPPPPV 8
PPPP +
Sbjct: 1462 PPPPVI 1467
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 6 PPVPL 10
PPVPL
Sbjct: 47 PPVPL 51
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 6 PPVPL 10
PPVPL
Sbjct: 47 PPVPL 51
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 RPPPPPV 8
+PPPP +
Sbjct: 1419 KPPPPAI 1425
Query: 3 PPPPPVP 9
PP P+P
Sbjct: 714 PPGAPIP 720
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 5 PPPVP 9
PPP+P
Sbjct: 386 PPPLP 390
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 3 PPPPPVPL 10
PP PP PL
Sbjct: 648 PPSPPAPL 655
>sp|MATRX_ABLVB|MATRIX protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 3 PPPPPVPL 10
PPP VPL
Sbjct: 44 PPPEYVPL 51
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 RRPPPPPV 8
+ PPPP +
Sbjct: 1415 KNPPPPAI 1422
Query: 3 PPPPPVP 9
PP PVP
Sbjct: 714 PPGAPVP 720
>sp|NS1_I85A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 RPPPPP 7
RPP PP
Sbjct: 211 RPPLPP 216
>sp|NS1_I78A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New
Query: 2 RPPPPP 7
RPP PP
Sbjct: 211 RPPLPP 216
>sp|NS1_I01A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 RPPPPP 7
RPP PP
Sbjct: 206 RPPLPP 211
>sp|NS1_I80A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 RPPPPP 7
RPP PP
Sbjct: 211 RPPLPP 216
>sp|NS1_I59A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 RPPPPP 7
RPP PP
Sbjct: 211 RPPLPP 216
>sp|NS1_I01A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 2 RPPPPP 7
RPP PP
Sbjct: 206 RPPLPP 211
>sp|NS1_I18A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Brevig
Query: 2 RPPPPP 7
RPP PP
Sbjct: 211 RPPLPP 216
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 3 PPPPP 7
PPP P
Sbjct: 1224 PPPKP 1228
>sp|ORF0_VZVO|MEMBRANE protein 0|Varicella-zoster virus (strain Oka vaccine)
Query: 1 RRPPPPPVPL 10
RRP PPV L
Sbjct: 8 RRPGTPPVTL 17
>sp|NS1_I78A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New
Query: 2 RPPPPP 7
RPP PP
Sbjct: 211 RPPLPP 216
>sp|NS1_I00A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Duck/Hong
Query: 2 RPPPPP 7
RPP PP
Sbjct: 206 RPPLPP 211
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 3 PPPPPVPL 10
P PP VPL
Sbjct: 1175 PAPPIVPL 1182
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 2 RPPPPP 7
+P PPP
Sbjct: 48 QPSPPP 53
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 RPPPPP 7
+P PPP
Sbjct: 48 QPSPPP 53
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 RRPPPPPVP 9
+R P P+P
Sbjct: 471 KRKPDQPIP 479
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 3 PPPPPVPL 10
PP PVPL
Sbjct: 1391 PPLLPVPL 1398
>sp|V_MEASC|NON-STRUCTURAL protein V|Measles virus (strain Ichinose-B95a) (MeV)
Query: 4 PPPPVP 9
PPPP P
Sbjct: 213 PPPPNP 218
>sp|NS1_I02A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 RRPPPP 6
RRPP P
Sbjct: 210 RRPPLP 215
>sp|MATRX_RABVP|MATRIX protein|Rabies virus (strain Pasteur vaccins
Query: 3 PPPPPVPL 10
PPP VPL
Sbjct: 34 PPPEYVPL 41
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 PPPPPV 8
PPPP +
Sbjct: 1464 PPPPAI 1469
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 5 PPPVP 9
PPP+P
Sbjct: 357 PPPLP 361
Query: 1 RRPPPPP 7
++PPP P
Sbjct: 355 QKPPPLP 361
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 PPPPPV 8
PPPP +
Sbjct: 1445 PPPPAI 1450
Query: 3 PPPPPVPL 10
PP P+P+
Sbjct: 717 PPGGPIPV 724
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 PPPPPV 8
PPPP +
Sbjct: 1444 PPPPAI 1449
Query: 3 PPPPPVP 9
PP PVP
Sbjct: 716 PPGGPVP 722
>sp|MATRX_RABVS|MATRIX protein|Rabies virus (strain SAD B19)
Query: 3 PPPPPVPL 10
PPP VPL
Sbjct: 34 PPPEYVPL 41
>sp|NS1_I82A8|NON-STRUCTURAL protein 1|Influenza A virus (strain
Query: 2 RPPPPP 7
RPP PP
Sbjct: 211 RPPLPP 216
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 PPPPPV 8
PPPP +
Sbjct: 1454 PPPPAI 1459
Query: 3 PPPPPVP 9
PP P+P
Sbjct: 717 PPGGPIP 723
>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)
Query: 4 PPPPVP 9
PPPP P
Sbjct: 213 PPPPDP 218
>sp|MATRX_RABVI|MATRIX protein|Rabies virus (strain India) (RABV)
Query: 3 PPPPPVPL 10
PPP VPL
Sbjct: 34 PPPEYVPL 41
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 PPPPPV 8
P PPP+
Sbjct: 1483 PSPPPM 1488
>sp|VP30_MABVO|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 RPPPPP 7
+PPPPP
Sbjct: 69 KPPPPP 74
>sp|NS1_I01A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 RPPPPP 7
RPP PP
Sbjct: 206 RPPLPP 211
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 PPPPPV 8
PPPP +
Sbjct: 1455 PPPPAI 1460
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 PPPPPV 8
PPPP +
Sbjct: 1445 PPPPAI 1450
Query: 3 PPPPPVP 9
PP PVP
Sbjct: 714 PPGGPVP 720
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 PPPPPV 8
PPPP +
Sbjct: 1448 PPPPAI 1453
Query: 3 PPPPPVP 9
PP PVP
Sbjct: 720 PPGGPVP 726
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PPPPPV 8
P PPP+
Sbjct: 1483 PSPPPM 1488
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PPPPPV 8
P PPP+
Sbjct: 1483 PSPPPM 1488
>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 4 PPPPVP 9
PPPP P
Sbjct: 213 PPPPNP 218
>sp|NS1_I24A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Japan/1924
Query: 2 RPPPPP 7
RPP PP
Sbjct: 208 RPPLPP 213
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 PPPPPV 8
PPPP +
Sbjct: 1456 PPPPAI 1461
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 PPPPPV 8
PPPP +
Sbjct: 1446 PPPPAI 1451
Query: 3 PPPPPVP 9
PP PVP
Sbjct: 715 PPGGPVP 721
>sp|NS1_I01A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 RPPPPP 7
RPP PP
Sbjct: 206 RPPLPP 211
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 PPPPPV 8
PPPP +
Sbjct: 1454 PPPPAI 1459
Query: 3 PPPPPVP 9
PP PVP
Sbjct: 716 PPGGPVP 722
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 PPPPPV 8
PPPP +
Sbjct: 1443 PPPPAI 1448
Query: 3 PPPPPVP 9
PP PVP
Sbjct: 715 PPGGPVP 721
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 3 PPPPPV 8
PP PPV
Sbjct: 14 PPTPPV 19
>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 4 PPPPVP 9
PPPP P
Sbjct: 213 PPPPDP 218
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 PPPPPV 8
PPPP +
Sbjct: 1457 PPPPAI 1462
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 PPPPPV 8
PPPP +
Sbjct: 1446 PPPPAI 1451
Query: 3 PPPPPVP 9
PP PVP
Sbjct: 715 PPGGPVP 721
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 3 PPPPPV 8
PP PPV
Sbjct: 14 PPTPPV 19
>sp|V_MEASI|NON-STRUCTURAL protein V|Measles virus (strain IP-3-Ca) (MeV)
Query: 4 PPPPVP 9
PPPP P
Sbjct: 213 PPPPDP 218
>sp|MATRX_RABVE|MATRIX protein|Rabies virus (strain ERA) (RABV)
Query: 3 PPPPPVPL 10
PPP VPL
Sbjct: 34 PPPEYVPL 41
>sp|NS1_I02A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 2 RPPPPP 7
RPP PP
Sbjct: 189 RPPLPP 194
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 PPPPPV 8
PPPP +
Sbjct: 1424 PPPPAI 1429
Query: 3 PPPPPVP 9
PP P+P
Sbjct: 719 PPGAPIP 725
>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka
Query: 1 RRPPPPP 7
RRP PP
Sbjct: 142 RRPTTPP 148
>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 RRPPPPP 7
RRP PP
Sbjct: 142 RRPTTPP 148
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 3 PPPPPV 8
PP PPV
Sbjct: 14 PPTPPV 19
>sp|MATRX_RABVH|MATRIX protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 3 PPPPPVPL 10
PPP VPL
Sbjct: 34 PPPEYVPL 41
>sp|MATRX_ABLVH|MATRIX protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 3 PPPPPVPL 10
PPP VPL
Sbjct: 34 PPPEYVPL 41
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 RRPPPPPV 8
+ PPPP +
Sbjct: 1429 QSPPPPAI 1436
Query: 3 PPPPPVP 9
PP PVP
Sbjct: 725 PPGAPVP 731
>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 4 PPPPVP 9
PPPP P
Sbjct: 213 PPPPDP 218
>sp|MATRX_RABVC|MATRIX protein|Rabies virus (strain CVS-11) (RABV)
Query: 3 PPPPPVPL 10
PPP VPL
Sbjct: 34 PPPEYVPL 41
>sp|VP30_MABVP|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 RPPPPP 7
+PPPPP
Sbjct: 69 KPPPPP 74
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PPPPPVPL 10
P PPP+ L
Sbjct: 951 PLPPPLAL 958
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 6 PPVPL 10
PPVP+
Sbjct: 52 PPVPI 56
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 3 PPPPPV 8
PP PPV
Sbjct: 14 PPTPPV 19
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 3 PPPPPVPL 10
P PPP+ L
Sbjct: 951 PLPPPLAL 958
>sp|MATRX_RABVN|MATRIX protein|Rabies virus (strain Nishigahara RCEH)
Query: 3 PPPPPVPL 10
PPP VPL
Sbjct: 34 PPPEYVPL 41
>sp|MATRX_RABVD|MATRIX protein|Rabies virus (strain China/DRV) (RABV)
Query: 3 PPPPPVPL 10
PPP VPL
Sbjct: 34 PPPEYVPL 41
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 PPPPPVP 9
PP PVP
Sbjct: 740 PPGAPVP 746
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 3 PPPPP 7
PPP P
Sbjct: 74 PPPEP 78
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 PPPPPVP 9
PP PVP
Sbjct: 740 PPGAPVP 746
>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PPPPPV 8
P PPPV
Sbjct: 294 PAPPPV 299
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 PPPVPL 10
PPP+P
Sbjct: 376 PPPIPF 381
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 PPPVPL 10
PPP+P
Sbjct: 375 PPPIPF 380
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 PPPPPVP 9
PP PVP
Sbjct: 716 PPGGPVP 722
>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 4 PPPPVP 9
PPPP P
Sbjct: 213 PPPPDP 218
>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)
Query: 3 PPPPPVPL 10
PPP VPL
Sbjct: 34 PPPEYVPL 41
>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)
Query: 3 PPPPPV 8
P PPPV
Sbjct: 294 PEPPPV 299
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 3 PPPPPV 8
PP PPV
Sbjct: 14 PPTPPV 19
>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)
Query: 4 PPPPVP 9
PPPP P
Sbjct: 213 PPPPDP 218
>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 4 PPPPVP 9
PPPP P
Sbjct: 213 PPPPDP 218
>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)
Query: 4 PPPPVP 9
PPPP P
Sbjct: 213 PPPPDP 218
>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)
Query: 4 PPPPVP 9
PPPP P
Sbjct: 213 PPPPDP 218
>sp|VIF_HV1S2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 RRPPPPPV 8
R+PP P V
Sbjct: 159 RKPPLPSV 166
Query: 1 RRPPPPP 7
RR PP P
Sbjct: 158 RRKPPLP 164
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 PPPPPV 8
PPPP +
Sbjct: 1446 PPPPRI 1451
Query: 3 PPPPPVP 9
PP PVP
Sbjct: 715 PPGGPVP 721
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 3 PPPPPV 8
PP PPV
Sbjct: 14 PPTPPV 19
>sp|V_MEASE|NON-STRUCTURAL protein V|Measles virus (strain Edmonston) (MeV)
Query: 4 PPPPVP 9
PPPP P
Sbjct: 213 PPPPDP 218
>sp|VP30_MABVM|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 RPPPPP 7
+PPPPP
Sbjct: 69 KPPPPP 74
>sp|VP30_MABVA|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 RPPPPP 7
+PPPPP
Sbjct: 69 KPPPPP 74
>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPPPPVP 9
PP PVP
Sbjct: 403 PPESPVP 409
>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 PPPPPVP 9
PP PVP
Sbjct: 403 PPESPVP 409
>sp|MATRX_RABVB|MATRIX protein|Rabies virus (strain silver-haired bat-associated)
Query: 3 PPPPPVPL 10
PPP +PL
Sbjct: 34 PPPEYIPL 41
>sp|MATRX_RABVR|MATRIX protein|Rabies virus (strain China/MRV) (RABV)
Query: 3 PPPPPVPL 10
PPP VPL
Sbjct: 34 PPPEYVPL 41
>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 4 PPPPVP 9
PPPP P
Sbjct: 213 PPPPDP 218
>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)
Query: 2 RPPPPPVP 9
RP P P P
Sbjct: 319 RPTPSPAP 326
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 RPPPPPVP 9
R PP P P
Sbjct: 1788 RNPPQPAP 1795
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 PPPPPVP 9
PP P+P
Sbjct: 719 PPGAPIP 725
>sp|ORF0_VZVD|MEMBRANE protein 0|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 RRPPPPPVPL 10
RRP PPV L
Sbjct: 8 RRPGTPPVTL 17
>sp|VIF_HV1YB|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 RRPPPPPV 8
RRPP P V
Sbjct: 159 RRPPLPSV 166
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 3 PPPPPVPL 10
PPPP L
Sbjct: 418 PPPPSASL 425
>sp|VIF_HV1S9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 RRPPPPPV 8
R+PP P V
Sbjct: 159 RKPPLPSV 166
Query: 1 RRPPPPP 7
RR PP P
Sbjct: 158 RRKPPLP 164
>sp|VIF_HV1YF|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 RRPPPPPV 8
R+PP P V
Sbjct: 159 RKPPLPSV 166
>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PPPPPVP 9
PP PVP
Sbjct: 403 PPESPVP 409
>sp|VIF_HV1AN|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 RRPPPPPV 8
R+PP P V
Sbjct: 159 RKPPLPSV 166
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 4 PPPPV 8
PPPPV
Sbjct: 14 PPPPV 18
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 5 PPPVPL 10
P PVPL
Sbjct: 140 PRPVPL 145
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 PPPPPVP 9
PP P+P
Sbjct: 716 PPGGPIP 722
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 PPPPPVP 9
PP P+P
Sbjct: 739 PPGAPIP 745
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 5 PPPVP 9
PPP+P
Sbjct: 232 PPPLP 236
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 PPPPPVP 9
PP P+P
Sbjct: 739 PPGAPIP 745
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 RPPPPPVP 9
R PP P P
Sbjct: 1796 RNPPHPAP 1803
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 3 PPPPPV 8
PPP PV
Sbjct: 12 PPPAPV 17
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 4 PPPPV 8
PPPPV
Sbjct: 14 PPPPV 18
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 3 PPPP 6
PPPP
Sbjct: 123 PPPP 126
Query: 4 PPPP 7
PPPP
Sbjct: 123 PPPP 126
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 RPPPPPVP 9
R PP P P
Sbjct: 1796 RNPPHPAP 1803
>sp|NEC1_HCMVM|NUCLEAR egress protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RPPPPPVPL 10
RP PP PL
Sbjct: 360 RPQSPPPPL 368
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 3 PPPPPVPL 10
PPPP L
Sbjct: 512 PPPPSASL 519
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 3 PPPPPVPL 10
PP PP PL
Sbjct: 649 PPSPPAPL 656
>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PPPPPVP 9
PPPP P
Sbjct: 97 PPPPYSP 103
>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PPPPPVP 9
PPPP P
Sbjct: 97 PPPPYSP 103
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RPPPPPVP 9
RPP PVP
Sbjct: 934 RPPDAPVP 941
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 RRPPPPP 7
RRPP PP
Sbjct: 488 RRPPEPP 494
>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12
Query: 2 RPPPP 6
+PPPP
Sbjct: 18 QPPPP 22
309|Sequence|1541|1550|PPVPLLPPGT
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 4 PLLPPG 9
PL+PPG
Sbjct: 546 PLVPPG 551
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 2 PVPLLPP 8
PVP +PP
Sbjct: 594 PVPTIPP 600
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 PVPLLPP 8
PVP +PP
Sbjct: 607 PVPTIPP 613
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 2 PVPLLPP 8
PVP +PP
Sbjct: 607 PVPTIPP 613
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PPVPLLPPGT 10
PP LLPPGT
Sbjct: 193 PPEVLLPPGT 202
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PPVPLLPPGT 10
PP LLPPGT
Sbjct: 193 PPEVLLPPGT 202
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PPVPLLPPGT 10
PP LLPPGT
Sbjct: 193 PPEVLLPPGT 202
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PPVPLLPPGT 10
PP LLPPGT
Sbjct: 193 PPEVLLPPGT 202
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PPVPLLPPGT 10
PP LLPPGT
Sbjct: 193 PPEVLLPPGT 202
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 PPVPLLPPGT 10
PP LLPPGT
Sbjct: 193 PPEVLLPPGT 202
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 PPVPLLPPGT 10
PP LLPPGT
Sbjct: 193 PPEVLLPPGT 202
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 2 PVPLLPP 8
PVP +PP
Sbjct: 600 PVPTIPP 606
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 PVPLLPP 8
PVP +PP
Sbjct: 594 PVPTIPP 600
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 2 PVPLLPP 8
PVP +PP
Sbjct: 594 PVPTIPP 600
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 2 PVPLLPP 8
PVP +PP
Sbjct: 594 PVPTIPP 600
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 2 PVPLLPP 8
PVP +PP
Sbjct: 594 PVPTIPP 600
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 2 PVPLLPP 8
PVP +PP
Sbjct: 600 PVPTIPP 606
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 2 PVPLLPP 8
PVP +PP
Sbjct: 594 PVPTIPP 600
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 2 PVPLLPP 8
PVP +PP
Sbjct: 606 PVPTIPP 612
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 PPVPLLPPGT 10
PP LLPPGT
Sbjct: 193 PPEVLLPPGT 202
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 PPVPLLPPGT 10
PP LLPPGT
Sbjct: 193 PPEVLLPPGT 202
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 2 PVPLLPP 8
PVP +PP
Sbjct: 594 PVPTIPP 600
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 2 PVPLLPP 8
PVP +PP
Sbjct: 593 PVPTIPP 599
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 2 PVPLLPP 8
PVP +PP
Sbjct: 593 PVPTIPP 599
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 PVPLLPP 8
PVP +PP
Sbjct: 593 PVPTIPP 599
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 2 PVPLLPP 8
PVP +PP
Sbjct: 593 PVPTIPP 599
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 PPVPLLPPGT 10
PP + P GT
Sbjct: 490 PPSAICPAGT 499
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PPVPLLP 7
PP+P+LP
Sbjct: 11 PPLPVLP 17
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PPVPLLP 7
PP+P+LP
Sbjct: 11 PPLPVLP 17
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 5 LLPPG 9
LLPPG
Sbjct: 1936 LLPPG 1940
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 5 LLPPG 9
LLPPG
Sbjct: 1936 LLPPG 1940
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 VPLLPP 8
VPL PP
Sbjct: 183 VPLYPP 188
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 VPLLPP 8
VPL PP
Sbjct: 183 VPLYPP 188
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 5 LLPPG 9
LLPPG
Sbjct: 1936 LLPPG 1940
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 5 LLPPG 9
LLPPG
Sbjct: 1936 LLPPG 1940
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 4 PLLPP 8
PL+PP
Sbjct: 296 PLIPP 300
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PPVPLLPPGT 10
PP+ + PP T
Sbjct: 557 PPICVDPPAT 566
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 PPVPLLPPGT 10
PP P PGT
Sbjct: 295 PPTPSPQPGT 304
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 4 PLLPPGT 10
PLLP GT
Sbjct: 219 PLLPDGT 225
>sp|11K_PAVHV|HOST-MODULATION protein 11K|Human parvovirus B19 (strain HV)
Query: 1 PPVPLLPPGT 10
PPVP+ P T
Sbjct: 52 PPVPIRQPNT 61
>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PPVPLL 6
PP+P+L
Sbjct: 200 PPLPVL 205
>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PPVPLL 6
PP+P+L
Sbjct: 200 PPLPVL 205
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 4 PLLPPG 9
PLL PG
Sbjct: 657 PLLEPG 662
310|Sequence|1546|1555|LPPGTSPPVD
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 2 PPGTSPPVD 10
PPG+ PP++
Sbjct: 183 PPGSCPPIE 191
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 PPGTSPP 8
PPGTS P
Sbjct: 1824 PPGTSDP 1830
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 PPGTSPP 8
PPGTS P
Sbjct: 1820 PPGTSDP 1826
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 PPGTSPP 8
PPGTS P
Sbjct: 1824 PPGTSDP 1830
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 PGTSPPV 9
PGT PP+
Sbjct: 1622 PGTCPPI 1628
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 PGTSPPV 9
PGT PP+
Sbjct: 1622 PGTCPPI 1628
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 PPGTSPP 8
PPGTS P
Sbjct: 1822 PPGTSDP 1828
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 2 PPGTSPPVD 10
PPG+ PP++
Sbjct: 183 PPGSCPPIE 191
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 2 PPGTSP 7
PPGT+P
Sbjct: 781 PPGTNP 786
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 PPGTSPPVD 10
PPG PP +
Sbjct: 476 PPGAKPPTN 484
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 PPGTSPP 8
PPG +PP
Sbjct: 466 PPGANPP 472
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 PPGTSPPVD 10
PPG S P D
Sbjct: 454 PPGGSSPTD 462
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 PPGTSPP 8
PPG PP
Sbjct: 476 PPGAQPP 482
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 LPPGTSPPVD 10
PP SP +D
Sbjct: 1818 FPPSNSPIID 1827
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 PPGTSPP 8
PPGT+ P
Sbjct: 1823 PPGTTDP 1829
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 PPGTSPP 8
PPG PP
Sbjct: 477 PPGADPP 483
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 PPGTSPP 8
PPGT+ P
Sbjct: 1823 PPGTTDP 1829
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 PPGTSPP 8
PPGT+ P
Sbjct: 1823 PPGTTDP 1829
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 2 PPGTSPP 8
PPG PP
Sbjct: 475 PPGAKPP 481
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 PPGTSPP 8
PPG PP
Sbjct: 477 PPGADPP 483
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 PPGTSPP 8
PPGT+ P
Sbjct: 1823 PPGTTDP 1829
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 PGTSPPVD 10
PG PPV+
Sbjct: 435 PGVIPPVN 442
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 3 PGTSPPVD 10
PG PPV+
Sbjct: 435 PGVIPPVN 442
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 PGTSPPVD 10
PG PPV+
Sbjct: 435 PGVIPPVN 442
>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 PGTSPPVD 10
PG PPV+
Sbjct: 435 PGVIPPVN 442
>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 PGTSPPVD 10
PG PPV+
Sbjct: 435 PGVIPPVN 442
>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 PGTSPPVD 10
PG PPV+
Sbjct: 435 PGVIPPVN 442
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 PGTSPPVD 10
PG PPV+
Sbjct: 435 PGVIPPVN 442
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 PPGTSPP 8
PPGT+ P
Sbjct: 1816 PPGTTDP 1822
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PPGTSPP 8
PPGT+ P
Sbjct: 1792 PPGTTDP 1798
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PPGTSPP 8
PPGT+ P
Sbjct: 1792 PPGTTDP 1798
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 PGTSPPVD 10
PG PPV+
Sbjct: 435 PGIIPPVN 442
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 PGTSPPVD 10
PG PPV+
Sbjct: 435 PGIIPPVN 442
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 PGTSPPVD 10
PG PPV+
Sbjct: 435 PGIIPPVN 442
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 PGTSPPVD 10
PG PPV+
Sbjct: 435 PGIIPPVN 442
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 3 PGTSPPVD 10
PG PPV+
Sbjct: 435 PGIIPPVN 442
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 PPGTSPP 8
PPGT+ P
Sbjct: 1818 PPGTNDP 1824
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 PGTSPPV 9
PG PP+
Sbjct: 1622 PGACPPI 1628
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 1 LPPGTSPP 8
LP G+ PP
Sbjct: 333 LPHGSPPP 340
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka
Query: 1 LPPGTSPPVD 10
+PP ++ PV+
Sbjct: 27 IPPESTTPVE 36
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 1 LPPGTSPPVD 10
+PP ++ PV+
Sbjct: 27 IPPESTTPVE 36
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 1 LPPGTSPP 8
LP G+ PP
Sbjct: 333 LPHGSPPP 340
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 1 LPPGTSPPVD 10
+P G+ PP++
Sbjct: 209 IPQGSCPPIE 218
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 PPGTS 6
PPGTS
Sbjct: 1791 PPGTS 1795
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 PPGTS 6
PPGTS
Sbjct: 1807 PPGTS 1811
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 3 PGTSPPVD 10
PGT P V+
Sbjct: 226 PGTRPQVN 233
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 PPGTS 6
PPGTS
Sbjct: 1807 PPGTS 1811
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 PPGTS 6
PPGTS
Sbjct: 1807 PPGTS 1811
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 PPGTS 6
PPGTS
Sbjct: 1807 PPGTS 1811
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 PPGTS 6
PPGTS
Sbjct: 1807 PPGTS 1811
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 PPGTS 6
PPGTS
Sbjct: 1807 PPGTS 1811
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 3 PGTSPPVD 10
PG+ PP++
Sbjct: 182 PGSCPPIE 189
>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 GTSPPVD 10
GT PP D
Sbjct: 266 GTPPPKD 272
>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 GTSPPVD 10
GT PP D
Sbjct: 266 GTPPPKD 272
>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 GTSPPVD 10
GT PP D
Sbjct: 266 GTPPPKD 272
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 PPGTS 6
PPGTS
Sbjct: 1807 PPGTS 1811
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 PPGTS 6
PPGTS
Sbjct: 1807 PPGTS 1811
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 PPGTS 6
PPGTS
Sbjct: 1807 PPGTS 1811
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 PPGTS 6
PPGTS
Sbjct: 1802 PPGTS 1806
>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)
Query: 1 LPPGTSPPVD 10
LP GT P D
Sbjct: 467 LPTGTPPDTD 476
>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27
Query: 4 GTSPPVD 10
GT+PP +
Sbjct: 237 GTAPPTN 243
>sp|VE2_HPV70|REGULATORY protein E2|Human papillomavirus type 70
Query: 1 LPPGTS 6
+PPGT+
Sbjct: 64 VPPGTT 69
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 1 LPPGTSPP 8
L PG PP
Sbjct: 200 LRPGVLPP 207
>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P
Query: 3 PGTSPPVD 10
PGT+P +D
Sbjct: 325 PGTAPAMD 332
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 LPPGTSPPV 9
LPP PPV
Sbjct: 2313 LPPAKQPPV 2321
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 1 LPPGTSPPVD 10
+PPG PP++
Sbjct: 179 VPPGDCPPLE 188
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PPGTSPPV 9
P GTSP V
Sbjct: 393 PEGTSPAV 400
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LPPGTSP 7
+PP T+P
Sbjct: 168 MPPQTTP 174
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 LPPGTSP 7
+PP T+P
Sbjct: 168 MPPQTTP 174
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LPPGTSP 7
+PP T+P
Sbjct: 169 MPPQTTP 175
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 PPGTSPPVD 10
PPGT P D
Sbjct: 464 PPGTRGPED 472
>sp|SPIKE_ADE31|FIBER protein|Human adenovirus A serotype 31
Query: 1 LPPGTSPPVD 10
L TSPP+D
Sbjct: 209 LALATSPPLD 218
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 LPPGTSPP 8
L PGT PP
Sbjct: 314 LTPGTYPP 321
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 PPGTSPP 8
PPG PP
Sbjct: 476 PPGAQPP 482
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 5 TSPPVD 10
T PPVD
Sbjct: 1226 TPPPVD 1231
311|Sequence|1551|1560|SPPVDPFTTL
>sp|MC007_MCV1|PROTEIN MC007|Molluscum contagiosum virus subtype 1
Query: 1 SPPVDPFTTL 10
SPP D F++L
Sbjct: 188 SPPEDSFSSL 197
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 2 PPVDP 6
PPVDP
Sbjct: 1673 PPVDP 1677
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 1 SPPVDPFTTL 10
+PPVDP TL
Sbjct: 383 APPVDPAGTL 392
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 1 SPPVDPFTTL 10
+PPVDP TL
Sbjct: 383 APPVDPAGTL 392
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 PPVDP 6
PP+DP
Sbjct: 1673 PPIDP 1677
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 2 PPVDP 6
PP+DP
Sbjct: 1673 PPIDP 1677
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPVDPFTT 9
+PP +P+ T
Sbjct: 660 APPTNPYNT 668
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPVDPFTT 9
+PP +P+ T
Sbjct: 662 APPTNPYNT 670
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPVDPFTT 9
+PP +P+ T
Sbjct: 659 APPTNPYNT 667
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPVDPFTT 9
+PP +P+ T
Sbjct: 661 APPTNPYNT 669
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPVDPFTT 9
+PP +P+ T
Sbjct: 662 APPTNPYNT 670
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPVDPFTT 9
+PP +P+ T
Sbjct: 661 APPTNPYNT 669
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPVDPFTT 9
+PP +P+ T
Sbjct: 661 APPTNPYNT 669
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPVDPFTT 9
+PP +P+ T
Sbjct: 661 APPTNPYNT 669
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPVDPFTT 9
+PP +P+ T
Sbjct: 661 APPTNPYNT 669
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPVDPFTT 9
+PP +P+ T
Sbjct: 660 APPTNPYNT 668
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPVDPFTT 9
+PP +P+ T
Sbjct: 661 APPTNPYNT 669
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 3 PVDPF 7
P+DPF
Sbjct: 1457 PIDPF 1461
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 3 PVDPF 7
P+DPF
Sbjct: 1454 PIDPF 1458
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPVDPFTTL 10
+PP+DP L
Sbjct: 458 APPIDPVEDL 467
>sp|YVEB_VACCC|UNCHARACTERIZED 11.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SPPVDPFTT 9
S P++PF+T
Sbjct: 7 SNPINPFST 15
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPVDPFTTL 10
+PPVDP L
Sbjct: 458 APPVDPAVDL 467
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPVDPFTTL 10
+PP+DP L
Sbjct: 458 APPIDPAVDL 467
>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 1 SPPVDP 6
SPP++P
Sbjct: 230 SPPINP 235
>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62
Query: 1 SPPVDPFTTL 10
SP VDP+ +
Sbjct: 436 SPKVDPYAQM 445
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 3 PVDPF 7
P+DPF
Sbjct: 1444 PLDPF 1448
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 2 PPVDP 6
PP DP
Sbjct: 384 PPTDP 388
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPVDPFTTL 10
+PP+DP L
Sbjct: 456 APPLDPAVDL 465
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPVDPFTTL 10
+PP+DP L
Sbjct: 457 APPMDPAVDL 466
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPVDPFTT 9
+PP +P+ +
Sbjct: 659 APPTNPYNS 667
>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)
Query: 2 PPVDP 6
PP DP
Sbjct: 384 PPTDP 388
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 1 SPPVDP 6
+PP DP
Sbjct: 738 TPPADP 743
>sp|UL25_HHV6G|VIRION-PACKAGING protein UL25 homolog|Human herpesvirus 6A (strain GS)
Query: 3 PVDPF 7
P+DPF
Sbjct: 124 PLDPF 128
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPVDPFTTL 10
+PP+DP L
Sbjct: 458 APPLDPAVDL 467
>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PVDPF 7
P+DPF
Sbjct: 124 PLDPF 128
>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)
Query: 3 PVDPF 7
P+DPF
Sbjct: 124 PLDPF 128
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 SPPVDPFTTL 10
+PP DP L
Sbjct: 459 APPADPAVDL 468
312|Sequence|1556|1565|PFTTLASKAS
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 PFTTLAS 7
PFT LAS
Sbjct: 737 PFTGLAS 743
313|Sequence|1561|1573|ASKASPTLDFTER
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SKASPTLDF 10
+K PTLDF
Sbjct: 84 AKNKPTLDF 92
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 SKASPTLDF 10
+K PTLDF
Sbjct: 35 AKNKPTLDF 43
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 SKASPTLDF 10
+K PTLDF
Sbjct: 35 AKNKPTLDF 43
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SKASPTLDF 10
+K PTLDF
Sbjct: 215 AKNKPTLDF 223
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SKASPTLDF 10
+K PTLDF
Sbjct: 315 AKNKPTLDF 323
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 SKASPTLDF 10
+K PTLDF
Sbjct: 315 AKNKPTLDF 323
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SKASPTLDF 10
+K PTLDF
Sbjct: 315 AKNKPTLDF 323
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SKASPTLDF 10
+K PTLDF
Sbjct: 315 AKNKPTLDF 323
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SKASPTLDF 10
+K PTLDF
Sbjct: 315 AKNKPTLDF 323
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SKASPTLDF 10
+K PTLDF
Sbjct: 315 AKNKPTLDF 323
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SKASPTLDF 10
+K PTLDF
Sbjct: 315 AKNKPTLDF 323
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SKASPTLDF 10
+K PTLDF
Sbjct: 35 AKNKPTLDF 43
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 SKASPTLDF 10
+K PTLDF
Sbjct: 315 AKNKPTLDF 323
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 2 SKASPTLDFT 11
SKAS TLD T
Sbjct: 149 SKASVTLDRT 158
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SKASPTLDF 10
S PTLDF
Sbjct: 367 SSCVPTLDF 375
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 2 SKASPTLDF 10
S PTLDF
Sbjct: 44 SSCVPTLDF 52
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 SKASPTLDF 10
++ PTLDF
Sbjct: 314 AQGKPTLDF 322
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 SKASPTLDF 10
++ PTLDF
Sbjct: 314 AQGKPTLDF 322
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 SKASPTLDF 10
++ PTLDF
Sbjct: 314 AQGKPTLDF 322
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 SKASPTLDF 10
++ PTLDF
Sbjct: 314 AQGKPTLDF 322
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 SKASPTLDF 10
++ PTLDF
Sbjct: 314 AQGKPTLDF 322
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 KASPTLDF 10
+ PTLDF
Sbjct: 328 EGKPTLDF 335
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 ASPTLDFT 11
A+P DFT
Sbjct: 503 ATPPFDFT 510
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 ASPTLDFT 11
A+P DFT
Sbjct: 503 ATPPFDFT 510
>sp|GLYC_HRSV8|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 6 PTLDFTER 13
PTL TER
Sbjct: 235 PTLKTTER 242
>sp|GLYC_HRSV1|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 6 PTLDFTER 13
PTL TER
Sbjct: 235 PTLKTTER 242
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 6 PTLDF 10
PTLDF
Sbjct: 327 PTLDF 331
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 7 TLDFTER 13
TLD TER
Sbjct: 461 TLDMTER 467
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 5 SPTLDFTE 12
S TLDFT+
Sbjct: 2051 SVTLDFTK 2058
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 7 TLDFTE 12
TLD+TE
Sbjct: 550 TLDYTE 555
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 KASPTLDFTE 12
K +PT+ FT+
Sbjct: 2124 KENPTVSFTK 2133
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 4 ASPTLDFTE 12
+SP+L FT+
Sbjct: 752 SSPSLKFTD 760
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 SKASPTLDFTER 13
S SP L TER
Sbjct: 78 SLTSPVLQSTER 89
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas)
Query: 2 SKASPTLDFTER 13
S SP L TER
Sbjct: 78 SLTSPVLQSTER 89
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 4 ASPTLDFTE 12
+SP+L FT+
Sbjct: 752 SSPSLKFTD 760